##maf version=1 scoring=roast.v3.3 a score=846.000000 s hg38.chr3_KI270784v1_alt 0 3 + 184404 GAA s panTro5.chr1 222281631 3 + 228573443 GAA i panTro5.chr1 N 0 C 0 s gorGor5.CYUI01015413v1 1640419 3 + 3967317 GAA i gorGor5.CYUI01015413v1 N 0 C 0 a score=1843423.000000 s hg38.chr3_KI270784v1_alt 3 1446 + 184404 TTCCTAGAAACTGTTTTCCTTGTCTGCGGCCATTGTGCTGCTGCTACACA----ACTACCGCAAGCAGCCCTTCACGCCCTCCTCCCAGTACAAAGCTAATTGACTTGTGAGAAATGTTAAGCTTGGAAGAGTCAGCATCGCTGCACTTATTTTTTATTCTACTCTGACATTAGAATAATCCTTGAGTGGGGGAAAGGTTAAAAACCCCCCTGGATAAGTGTTACTAATTAATGATGATTGTTTTAAACAATGTTTGGATAATTTTTCCTTGTCCCTTGACATAAACTTGATAAATAACTGAGAAGTGAGAAGGAGATTAGTGGGTTGATTAAATTCCATTCAGGTACTT-AAAGTTAGCTCCAAAAATTTAGCTATTTGTAAATTGTCATGCATTGTTAATGTATAAGAGATGTAGATTTCATTTATCTTTGGTGGAGCGAGATGAAGCAGTGAATCATTGAAG-----------ACTGAAA-GAAAGAAAAAGGTCTTTTCCCTTTTCTTT---AAGAAGCATCATTAGTTAAAAACATGTTAGTTGATACCAGAGAACTATATTTAAAGGGACAGCAATAAGCAAATTGATTACTCTGGTGATTATTGGAGTGACATTGCCTTTTAGTTGTACTTTCACAAAAATTCACAATATTTGCCAAAGTCAAGTTATCCATTACACTATTA---ATTTGTCATTCTTTTGTTTATATAGTCAATATCTCTATCTCAATTGGATCTATCTCAACTGCTTCTAAACAAGCCACCATAGTCTCTCCCATTTCAACAATCTCTTCCAAGTACCACTTCATTTCTTCTTTTCATATTTTTGAAAACTTTTGAAAAACTACCTATTTTCCTCCTCCATTTCTTGTTCATTCCATTCTAGTGGACATGGAATCTGTTCCTCCTCCAAAACGGAATTTGGTCACCCTTAAATTACTAAACCCAAAACAATATGTT---GTCTTTATCTTTACCTCTCTGTGGCATTTAATGATAAGACCACTACTTTCTTCTCTTTTACCCTTCTTTCTTGAATTCAGTCAAACAACGTACTTACATTTTTTGTCTTATTCTCCATCTTAGAAACCACCTCAGCTTTCTCCATTCAGCTATAAAATTGTGCTTTTCCTCAAAGATTAATCTGCCTCTCCTCTCACTCTATACTATCTCTGTTAGCTAATTTTATTTGTGCACATTGCTTA---TACTGGGCATTATATACACATATGCATGTGTGTACATGTGCACACACACACTGTATGTGGACatgtatatatatatatgtgtgtgtgt--atatatatagtatatatataaatTACA-----ATAACATAAAGGTGGCATTTTAAATTAGTGGAaattaccctgatttgatcactacacattctatacatgtaaagaaaatatcactctgtatcccaagaatatgtacaattatggtttgtcaaatgaaaaAGTTCATACATTGAAAAA s panTro5.chr1 222281634 1447 + 228573443 TTCCTAGAAACTGTTTTCCTTGTCTGCGGCCATTGTGCTGCTGCTACACA----ACTACCGCAAGCAGCCCTTCACACCCTCCTCCCAGTACAAAGCTAATTGACTTGTGAGAAATGTTAAGCTTGGAAGAGTCAGCATCACTGCACTTATTTTTTATTCTACTCTGAAATTAGAATAATCCTTGAGTGGGGGAAAGGTTAAAAACCCCCCTGGATAAGTGTTACTAATTAATGATGATTGTTTTAAACAATGTTTGGATAATTTTTCCTTGTCCCTTGACATAAACTTGATAAATAACTGAGAAGTGAGAAGGAGATTAGTGGGTTGATTAAATTCCATTCAGGTACTT-AAAGTTAGCTCCAAAAATTTAGCTATTTATAAATTGTCATGCATTGTTAATGTATAAGAGATGCAGATTTCATTTATCTTTGGTGGAGCGAGATGAAGCAGTGAATCATTGAAG-----------ACTGAAA-GAAAGAAAAAGGTCTTTTCCCTTTTCTTT---AAGAAGCATCATTAGTTAAAAACATGTTAGTTGATACCAGAGAACTATATTTAAAGGGACAGCAATAAGCAAATTGATTACTCTGGTGATTATTGGAGTGACATTGCCTTTTAGTTGCACTTTCACAAAAATTCACAATATTTGCCAAAGTCAAGTTATCCATTACACTATTA---ATTTGTCATTCTTTTGTTTATATAGTCAATATCTCTATCTCAATTGGATCTATCTCAACTGCTTCTAAACAAGCCACCATAGTCTCTCCCATTTCAACAATCTCTTCCAAGTACCATTTCATTTCTTCTTTTCATATTTTTGAAAACTTTTGAAAAACTACCTATTTTCCTCCTCCATTTCTTGTCCATTCCATTCTAGTGGACATGGAATCTGTTCCTCCTCCAAAACGGAATTTGGTAACCCTTAAATTACCAAACCCAAAACAATATGTT---GCTTTTATCTTTACCTCTCTGTGGCATTTAATGATAAGACCACTACTTTCTTCTCTTTTACCCTTCTTTCTTGAATTCAGTCAAACAACGTACTTACATTTTTTGTCTTATTCTCCATCTTAGAAACCACCTCAGCTTTCTCCATTCAGCCATAAAATTGTGCTTTTCCTCAAAGATTAATCTGCCTCTCCTCTCACTCTATACTATCTCTGTTAGCTAATTTTATTCGTGCACATTGCTTA---TACTGGGCATtatatacacatatgcatgtgtgtacatgtgcacacacatactgtatgtggacatgtatatatatatatgtgtgtgtgtgtatatatatagtatatatataaatTACA-----ATAACATAAAGGTGGCATTTTAAATTAGTGGAaattaccctgatttgatcactacacattctatacatggaaagaaa-tatcactctgtatcccaagaatatgtacaattatggtttgccaaatgaaaaAGTTCATACATTGAAAAA i panTro5.chr1 C 0 C 0 s panPan2.chr4 168589975 1456 + 195804263 TTCCTAGAAACTGTTTTCCTCGTCTGCGGCCATTGTGCTGCTGCTACACAGACTACTACCGCAAACAGCCCTTCACGCCCTCCTCCCAGTACAAAGCTAATTGACTTGTGAGAAATGTTAAGCTTGGGAGAGTCAGCATCGCTGTACTTATTTTTTATTCTACTCTGACATTAGAATAATCCTTGAGTGGGGGAAAGGTTAAAAACCCCTCTGGATAAGTGTTACTAATTAATGATGATTGTTCTAAACAACGTTTGGATAATTTTTCCTTGTCCCTTGACATAAACTTGATAAATAACTGAGAAGTGAGAAGGAGATTAGTGGGTTGATTAAATTCCATTCAGGTACTT-AAAGTTAGCTCCAAAAATTTAGCTATTTATAAACTGTCATGCATTGTTAATGTATAAGAGATGTAGATTTCATTTATCTTTGGTGGAGCGAGATGAAGCAGTGAATCATTGAAG-----------ACTGAAA-GAAACAAAAAGGCCTTTTCCCTTTTCCTT---AAGAAGCATCATTAGTTAAAAATATGTTAGTTGATACCAGAGGACTCTATTTAAAGGGACAACAATAAGCAAATTGATTACTCCGGTGATTATTGGAGTGACATTGCCTTTTACTTGGACTTTCACAAAAATTCATAATATTTGCCAAAGTCAAGTTATCCATTACACTATTA---ATTTGTCATTCTTTTGTTTATATAGTCAATATCTCTATCTCAATTGGATCTATCTCAACTGCTTCTAAACATGCCACCATACTCTCTCCCATTTCAACAATCTCTTCCAAGTACTATTTCATTTCTTCTTTTCATATTTTTGAAAACGTTTGAAAAACTACCTATTTTCCTCCTCCATTTCTTGTTCATTCCATTCTAGAGGACATGGAATCTGTTCCTCCTCCAAAATGGAATTTGGTAACCCTTAAATTACTAAACCCAAAATAATATGTTGAAGTTTTTATCTTTACCTCTCAGTGGCATTTAATGATAAGACCACTACCTTCTTCTCTTTTACCCTTCTTTCTTGAATTCAGTCAAACAACGTACTTACATTTTTCGTCTTATTCTCCATCTTAGAAACCACCTCAGCTTTCTCCATTCAGCCATAAAATTGTGCTTTTCCTCAAAGATTAATCTGCCTCTCCTCTCACTCTATACTATCTCTGTTAGCTAATTTTATTTGTGCACATTTCTTAGATTACTGGGCATtatatacacatatgcatgtgtgtacatgtgcacacac--actatatgtggacatgtatatatatgtgtgtgtgtgt----atatatatagtatatatacaaattacaatgatataACATAAAGGTGACATTTTAAATTAGTGGAaattaccctgacttgatcactgcacattgtatacatgtaaagaaa-tatcactctgtatcccaagaatatatacaattatggtttttcaaaagaaaaaGTTCATACATTGAAAAA i panPan2.chr4 N 0 C 0 s gorGor5.CYUI01015413v1 1640422 1438 + 3967317 TTCCTAGAAACTGTTTTCCTTGTCTGCGGCCATTGTGCTGCTGCTACACA----ACTACCGCAAGCAGCCCTTCACGCCCTCCTCCCAGTACAAAGCTAATTGACATGTGAGAAATGTTAAGCTTGGAAGAGTCAGCATCGCTGCACTTATTTTTTATTCTACTCTGACATTAGAATAATCCTTGAGTGGGGGAAAGGTTAAAACCCCCCCTGGATAAGTGTTACTAATTAATGATGATTGTTTTAAACAATGTTTGGATAATTTTTCCTTGTCCCTTGACATAAACTTGATAAATAACTGAGAAGTGAGAAGGAGATTAGTGGGTTGATTAAATTCCATTCAGGTACTT-AAAGTTAGCTCCAAAAATTTAGCTATTTATAAACTGTCATGCATTGTTAATGTATAAGAGATGTAGATTTCATTTATCTTTGGTGGAGCGAGATGAAGCAGTGAATCATTGAAG-----------ACTGAAA-GAAAGAAAAAGGTCTTTTCCCTTTTCTTT---GAGAAGCATCATTAGTTAAAAATATGTTAGTTGATACCAGAGAACTATATTTAAAGGGACAGCAATAAGCAAATTGATTACTCTGGTGATTATTGGAGTGACATTGCCTTTTAGTTGTACTTTCACAAAAATTCACAATATTTGCCAAAGTCAAGTTATCCATTACACTAT-----AATTGTCATTCTTTTGTTTATATAGTCAATATCTCTATCTCAATTGGATCTATCTCAACTGCTTCTAAACAAGCCACCATAGTCTCTCCCATTTCAACAATCTCTTCCAAGTACCATTTCATTTCTTCTTTTCATATTTTTGAAAACTTTTGAAAAACTACCTATTTTCCTCCTCCATTTCTTGTTCATTCCATTCTAGTGGACATGGAATCTGTTCCTCCTCCAAAACGGAATTTGGTAA-CCTTAAATTACTAAACCCAAAACAATATGTT---GTTTTTATCTTTACCTCTCTGTGGCATGTAATGATAAGACCACTACTTTCTTCTCTTTTACCCTTCTTTCTTGAATTCAGTCAAACAACGTACTTACATTTTTCATCTTATTCTCCATCTTAGAAACCACCTCAGCTTTCTCCATTCAGCCATAAAATTGTGCTTTTCCTCAAAGATTAATCTGCCTCTCCTCTCACTCTATACTATCTCTGTTAGCTAATTTTATTTGTGCACATTGCTTA---TACTGGGCATTATATACACATATGCATGTGTGTACATGTGCACACAC--ACTGTATGTGGACatgtatatatatgtgtgtgtgtgt----atatatatagtatatatataaatTACA-----ATAACATAAAGGTGGCATTTTAAATTAGTGGAaattaccctgatttgatcactacacattctatacatgtaaagaaa-tatcactctgtatcccaagaatatgtacaattatggtttgtcaaatgaaaaAGTTCATACATTGAAAAA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr7b 88120504 1450 + 115148730 TTCCTAGAAACTATTTTCCGTGTCTGCGGCCATTGTGCTGCTGCTACAGAGACTACTACCACAAGCAGCCCTTCACGCCCTCCTCCCAGTACAAAGCTAATTGACTTGTGAGAAATGTTAAGCTTGGAAGAGTCAGCATCACTACACTTATTTTTTATCCTACTCTGACATTAGAATAATCCTTGAGTGGGGGAAAGGTTAAAAACCCCTCTGGATAAGTGTTACTAATTAATGATGATTGTTCTAAACAATGTTTGGATAATTTTTCCTTGTCCCTTGATATAAACTTGATAAATAACTGAGAAGTGAGAAGGAGATTAGTGGGTTGATTAAATTCCATTCAGGTACTT-AAAGTTAGCTCCAAAAATTTAGCTATTTATAAATTGTCATGCATTGTTAATGTATAAGAGATGTAGATTTCATTTATCTTTGGTGGAGCGAGATGAAGCAGTGAATCATTGAAGTCAAAT-----ACTAAACTGAAAGAAAAAGGCCTTTTCCCTTTTCCTT---AAGAAGCATCATTAGTTAAAAATATATTAGTTGATACCAGAGAACTATATTTAAAGGGACAGCAATAAGCAAATTGATTACTCTGGTGATTATTGGAGTGACATTGCCTTTTAGTTGTACTTCCACAAAAATTCACAATATTTGCCAAAGTC-----ATCCATTACACTATTA-------GTCATTCTTTTGTTTATATAGTCAATATCTCTATCTCAGTTGGAGCTATGTCAACTGCTTCTAAACATGCCACCACAGTCTCTCCCATTTCAATAATCTCTTCCAAGTACTATTTCATTTCTTCTTTTCATATTTTTGAAAACTTTTGAAAAACTACCTATTTTCCTCCTCCATTTCTTGTTCATTCCATTCTAGTAGACATGGAATCTGTTCCTCCTCCAAAATGGAATTTAGTAACCCTTAAATTACTAAACACAAAATAATATGTTGAAGTTTTTATCTTTACTTCTCAGTGGCATTTAATGATAAGACCACTACTTTCT--TCTTTTACCCTTCTTTCTTGAATTCAGTCATACAACGTACTTACATTTTTAGTCTCATTCTCCATCTTAGAAACCACCTCAGCTTTCTCCATTCAGCCATAAAATTGTGCTTTTCCTCAAAGATTAATCTGCCTCTCCTCTCACTCTATACTATCTCTGTTAGCTAATTTTATTTGTGCACATTGCTTAGATTACTGTGCATtatatacatatatgcatgtgtgtacatgtgcacacacacactatatgtggacatgtatatatatgtgtgtgt--------atatatatagtatatatataaattacaatgatataACATAAAGGTGGCATTTTAAATTAGTGGAaattaccctgatttgatcactgcacactgtatacatgtaaagaaa-tatcactctgtatcccaagaatatgtacaattatggtttgtcaaatgaaaaAGTTCATACATTGAAAAA i nomLeu3.chr7b N 0 C 0 s macFas5.chr5 163585709 1464 + 189454096 TTCCTAGAAACTGTTTTCCTCATCTGCGGCCATTGTGCTGCTGCTACAGAGACTACTACCACAAGCAGCCCTTCACACCCTCCTCCCAGTACAAAGCTAATTGACTTGTGAGAAATGTTAAGCTTGGAAAAACCAGTATCGCTGCACATATTTTTTATTCTGCTCTGACATTAGAATAATCCTTGAGTAGGGGAAAGGTTAAAAACCCTTCTGGATAAGTGTTACTAATTAATGATGATTGTTCTAAACAATGTTAGGGTAATTTTTCCTTGTCCCTTGACATAAACTTGATAAATAACTGAGAAGTGAGAAGGAGATTAGTGGGTTGATTAAATTCCATTCAGGTACTTAAAAGTTAGCTCCAAAAATTTAGCTATTTATAAATTGTCATGCATTGTTAATGTATAAGAGATGTAGATTTCATTTATCTTTGGTGGAGCGAGATGAAGCAGTGAATCACTGAAGCCAAATACTAAACTGAAA-GAAAGTAAAAGGCCTTTTCCCTTTTCCTTAAGAAGAAGCATCATTAGTTTAAAATATATTAGCTGATACCAGAGAACTATATTTAAAGGGACAGCAATAAGCAAATTGATTACTCTGGTGACTATTGGAGTGACATTGCCTTTTAGTTGTACTTCCACAAAAATTCACAATATTTGCCAAAATCAACTTATCCATTACACTATTATTAATTTGTCATTCTTTTGTTTATATAGTCAATACCTCTATCTCAATTGGATCTATCTCAGCTGCTTCTAAACATGCCACCATAGTCTCTCCCATTTCAACAATCTCTTCCAAGTACTATTTCATTTCTTCTTTTCATATTTTTGAAAACTTTTGAAAAATTACCTATTTTCCTCCTCCATTTCTTGTTCATTCCATTCTAGTGGACATGGTATCTGTTCCTTCTCCAAAACAGAATTTAGTAACCCTTAAATTACTAAACCCAAAATAATATGTTGAAGTTTTTATCTTGACCTCTTAGTGACATTTAATGATAAGACCACTATCTTCTTCTCTTTTACCCTTCTTTATTGAAT----TCAAACAACATACTTACATTTTTAATCTGATTCCCCATCTTAGAAACCACCTCAGCTTTCTCCATTCAGCCATAAAATTGTGCTTTTCCTCAAAGATTAATCTGCCTCTCTTCTCACTCTATACTATCTCTGTTAGCTAATTTTATTTTTGCACATTGCTTAGATTATtgtgcattatatacacacgtgcatgtgtgtacatgtgcacacacactatatatatggacatgtata--------tgtgtgtgt----gtatatatagtatatgtataaattacaatgatataACATAATGGTGGCATGTTAAATTAGTGGAaattaccctgatttgatcactgcacattgtatacatgtaaagaaa-tatcactctgtatcccaagaatacgtacaattatgatttgtcaaatgaaaaAGTTCATAAATTGAAAAA i macFas5.chr5 N 0 I 2550 a score=153893.000000 s hg38.chr3_KI270784v1_alt 1449 142 + 184404 TTTTAGATAAATATCAaactttctctgaaactgtaactgtaaaatgtaa------------AAAACAGTAATTGCTATATTGCT----TATTTCTGAGTAGAAGAATATGAGACATTTCCCTAATCATTATGTGTAATTACAATTACATATATAT------------------------------ATG s panTro5.chr1 222283081 165 + 228573443 TTTTAGATAAATATCAaactttctctgaaactgtaactgtaaaatgtaa------------AAAACAGTAATTGCTATATTGCT----TATTTCTGAGTAGAAGAATATGAGACATTTCCCTGATCATTATGTGTAATTACAATtacatatatatg----tatgtaatatataa---acatatatatg i panTro5.chr1 C 0 C 0 s panPan2.chr4 168591431 164 + 195804263 TTTTAGATAAATATCAaactttctctgaaactgtaactgtaaaatgtaa------------AAAACAGTAATTGCTATATTGTT----TATTTCTGAGT---AGAATATGAGACATTTCCCTAATCATTATGTGTAATTACAATTACGtatatatg--tttatatattacatac---atatatatatg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015413v1 1641860 165 + 3967317 TTTTAGATAAATATCAaactttctctgaaactgtaactgtaaaatgtaa------------AAAACAGTAATTGCTATATTGCT----TATTTCTGAGTAGAAGAATATGAGACATTTCCCTAATCATTATGTGTAATTACAATtacatatatatatgtttatatattacatac---atat----ata i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr7b 88121954 168 + 115148730 TTTCAGATAAATATCAaactttctctgaaactgtaactgtaaaatgtaa------------AAAAAAGTAATTGCTATATTGTT----TATTTCTGAGTAGAAGAATATGAGACACTTCCCTAATCATTATGTGTAATTACAATtacatatatatg----tatgtaatatataaactatatatatata i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 163589723 167 + 189454096 TTTTAGATAAGTATCaaactgtctctgaaactgtaactgtgaaatgtaactgtaaaatgTTAAAAAAGTAACTACTACATTGTTTAACTATTTCTAACTAGAAGAATATGAAACCTCTCCCTAATCATTATGTGTAATT-TAATTACAATTACCTA-----ATACTAAATATG--------------- i macFas5.chr5 I 2550 T 2717 a score=83886.000000 s hg38.chr3_KI270784v1_alt 1591 133 + 184404 TAATTGTAATTACACATAATGATTAGGGAAATGTCTCATATTCTATATATATAGACAGAAAGAGAG--------AAAATATATGAGGGAGAGAAGGAATCTTTCCATCTCCTTTGAGTTCCACGGTGTTGAGAGTCAGGAC s panTro5.chr1 222283246 133 + 228573443 taattgtaattacacataatgatcagggaaatgtctcatattctatatatataGACAGAAAGAGAG--------AAAATATATGAGGGAGAGAAAGAATCTTTCCATCTCCTTTGAGTTCCACGGTGTTGAGAGTCAGGAC i panTro5.chr1 C 0 C 0 s panPan2.chr4 168591595 141 + 195804263 taattgtaattacatataatgattagggaaatgtctcatattctatatatatagagagagggagagagagaaaaaaaatatatgagggagagaaagaATCTTTCCATCTCCTTTGAGTTCCACGGTGTTGAGAGTCAGGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015413v1 1642025 132 + 3967317 taattgtaattacacataatgattagggaaatgtctcatattctatatatataGACAGAAAGAGAG--------AAAATATATGAGGGAGAGAAGGAATCTTTCCATCTCCTTTGAGTTCCACGGTGTTGAGAGT-AGGAC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr7b 88122122 83 + 115148730 taATTGTAATTACACACAACGATTAGGGAAATATCTCTCTCTCTGT----------------------------------------------------------CATCTCCTTTGAGTTCCACGGTGTTGACAGTCAGGAC i nomLeu3.chr7b C 0 C 0 e macFas5.chr5 163589890 2717 + 189454096 T a score=3313703.000000 s hg38.chr3_KI270784v1_alt 1724 2631 + 184404 AACTGCAATTGCTTCATCATGCCTGCTTGCAATTATAGGGCTTTTGAACCATTTGTTCCCTCCTTAGATATcctcatttttttcagattcttgcttagaagtcactcctccgtggacctcctctgacatattaaacattgcaGTCCATtataagctgcaagaggacagggatttttgcctgttttattccctactgtatcaccaggggctacagcaatatctgacaaacagtgggcatgtaatgaatatttgttaagtgaagtaatAAATTCaatcaaatcacatcacctgtttaaagcacttcattggcttcacattgcacttagaataaagagaaattctttttatacaatataagttcctgcagaatgcagacactttctacttctccagcctcttttcaactcctctcctactagcttctgtatttaagccacattagacctttcttcag-ttttttatatagactttgtcgcatcacacctcagagattctgtacatgttcttcctcctgcctagaaaggatcgtccctccactttcgccaactaatccctgctcaacttttcatctcagcaggaggcccattctctttggcaatcctctggcctccagcccatttattatatgctcacatgtcaacatgtacttcgtacagcatgtaacacaattgcacttttatattttaacaaattatatttcccatattgaactgtaagtctcctgaaagcaggaattttgttcttgctcatcatcaactttttcaacatccagtgcaccatttagaacttagatgtagtcaatagaggtttgtggaatgaaagaGGAAAAGAAAGAATTAATA---TTCCTTTAAATTAGGATGGCAAAGATCGTATATAGAAAATTGGCTAAGTTGTGGTCCATTCATGTTTGCTCCCAATTAAGGAGCACAGCTATGAAAAGGAAGGCTTCAAATTAATAACCAATAGA-TTTTTTTAAAAAGAAAACTggccaggtactgtggcttatgtctgtaatatcagcatgttgggaggccaaggcaggattacttgagcccagaaattccagaccagcctgagaatttggcaaaactctgtctctacaaaaattacaaaaattagccaagtttggtggcatgtgcctgtagtaccagctacttgggaggctgaggtggaagaatagcttgagtctgggaggtcaaggttgcaatgagctgtgattgcaccactgcactcaagcctgggtggtagagtaagaccctgtctcaaaaaaaaaaaaaa-----aaaagaaaaaTCACTAAGCAAAATAAGACATGTGAAGGATCATGTCAAAGGTAAGAAAAATTAGGGGAACATTAAAAGCTTTCTTCCCAAGCCACTAAATCAACTTGACTAACAAAATTACCACTTGATTTAGCATT-AGAAAATTACATTACATATCAAACATAAACCCATTAATCAAATACTAAAGAAATTTCTGAGTTAAATGGTATAATGTTAGCTTATGCCAGAGCTGACCTTGAAAGATTGTTCAAATATGGCTCAGTGTGATTGAAAGTTCTGTGTGAATATGTTTTTGGAAAGATCCAACAGCAACACCTTAGTGTATGTTTTTGAAATAAAATGTATCTGAGTAGCAGCAAAGTTATTCTCAAATTTCCATTTTATAGCTGGAGATGTTATACCGTGACGTATATGATAGGACCCAATATGGATCAATCCCTTTTAGAAGTCAATCAGGAAGAGGGGAGCAGTTAAAACAGTTGCTTGGT---------TTACAAACATTAGAACAATTTTCTTATTCACACCATCTGATTATTGTATTTTATTTTTTCCCCAACGTTTAGACTACACAATGAGTTAAGAATGATAAAAATAAGCTCACCAATATACTATGTACATATTTACCAAAATCTGTGCATGCTTATACATATAAACACAGCTGATAATTTATTAGTTAGGCTCATTTGTAATTTTTGTCACTATAGACCAGTTTTTTATTTAAATTGAAGATTAGTATACATTTTAAATGATTAGTCAAAATAAAAAATCTAAAATGTGCTCTAAAT-ACCTCTTAGGTCAGAAAAAAAAA--------GTCAAAAGCTAGAGTATAGAGAAATTAAGAAACGCCCTAAATTTCTAATCTGACAAAAATTCATACAAGATTTAAATATTTtaatggaaaatagaacagaactaattattgaagaaattatagaaaggaaacaaaataaacagattatatgg-aggatttttagaagataagtaaataaattaatatactaggaaaaaacaagggaaatatacttgataaataaaTACAGGTAAGAGTTCTTTTGAAATAATGATAAAATAGAAAATCTCTGTCAAAACTAAAAGGAAAGATGCataaatatataaataaatgataaaa--aatGTTGCATACATATATGAC-TTTTTCAGAATC-AAAAAATTTAAATTTCTG---taataaaatttaaatgtttataaatttaaaaaactagaagaaagaatgttgactgttcacaatacaaataaatgacaaatatttgaggtgatggatatgctaattatccttatttgatcattgggcattgtatacatgtatcaaaatatcactctgtatcccatgaatatgtacaatta s panTro5.chr1 222283379 2626 + 228573443 AACTACAATTGCTTCATCATGCCTGCTTGCAATTATAGGGCTTTTGAACCATTTGTTCCCTCCTTAGATATcctcatttttttcagattcttgcttagaagtcactcctccgtggacctcctctgacatattaaacattgcaGTCCATtataagctgcaagaggacagggatttttgcctgttttattccctactgtatcaccaggggctacagcaatatctgacaaacagtgggcatgtaatgaatatttgttaagtgaaGTAATAAATTCaatcaaatcacatcacctgtttaaagcacttcattggcttcacattgcacatagaataaagagaaattctttttatacaatataagttcctgcagaatgcagacactttctacttctccagcctcttttcaactcctctcctactagcttctgtatttaagccacattagacctttcttcag-ttttttatatagactttgttgcatcacacctcagagattctgtacatgttcttcctcctgcctagaaaggatcgtccctccactttcgccaactaatccctgctcaacttttcatctcagcaggaggcccattctctttggcaatcctctggcctccagcccatttattatatactcacatgtcaacatgtacttcgtacagcatgtaacacaattgcacttttatattttaacaaattatatttcccatattgaactgtaagtctcctgaaaggaggaattttgttcttgctcatcatcaactttttcaacatccagtgcaccatttagaacttagatgtagtcaatacaggtttgtggaatgaaagaGGAAAAGAAAGAATTAATA---TTCCTTTAAATTAGGATG-CAAAGATCGTATATAGAAAATTGGCTAAGTTGTGGTCCATTCATGTTTGCTCCCAATTAAGGAGCACAGCTATGAAAAGGAAGGCTTCAAATTAAAAACCAATCGA-TTTTTTAAAAAAGAAAACTggccaggtactgtggcttatgtctgtaatatcagcatgttgggaggccaaggcaggattacttgagcccagaaattccagaccagcctgagaatttggcaaaactctgtctctacaaaaaatacaaaaattagccaagtttggtggcatgtgcctgtagtaccagctacttgggaggctgaggtggaagaatagcttgagtctgggaggtcaaggctgcaatgagctgtgatcgcaccactgcactcaagcctgggtggtagagtaagaccctgtctcaaaaaaaaaaaaaa---------gaaaaaTCAGTAAGCAAAATAAGACATGTGAAGGATCATGTCAAAGGTAAGAAAAATTAGGGGAACATTAAAAGCTTTCTTCCCAAGCCACTAAATCAACTTGACTAACAAAATTACCACTTGATTTAGCATT-AGAAAATTACATTACATATCAAACATAAACCCATTAATCAAATACTAAAGAAATTTCTGAGTTAAATGGTATAATGTTAGCTTATGCCAGAGCTGACCTTGAAAGATTGTTCAAATATGGCTCAGTGTGATTGAAAGTTCTGTGTGAATATGTTTTTGGAAAGATCCAACAGCAACATCTTAGTGTATGTTTTTGAAATAAAATGTATCTGAGTAGCAGCAAAGTTATTCTCAAATTTCCATTTTATAGCTGGAGATGTTATACCGTGACATATATGATAGGACCCAATATGGATTAATCCCTTTTAGAAGTCAATCAGGAAGAGGGGAGCAGTTAAAA-AGTTGCTTGGT---------TTACAAACATTAGAACAATTTTCTTATTCACACCATCTGATTATTGTATTTTATTTTTTCCCCAATGTTTAGACTACACAATGAGTTAAGAATGATAAAAATAAGCTCACCAATATACTATGTACATATTTACCAAAATCTGTGCATGCTTATACATATAAACACAGCTGATAATTTATTAGTTAGGTTCATTTGTAATTTTTGTCACTATAGACCAGTTTTTTATTTAAATTGAAGATTAGTATAC-TTTTAAATGATTAGTCAAAATAAAAAATCTAAAATGTGCTCTAAAT-ACCTCTTAGGTCAGAAAAAAAAA-------AGTCAAAAGCTAGAATATAGAGAAATTAAGAAATGCCCTAAATTTCTAATCTGACAAAAATTCATATGAGATTTAAATATTTTAATGGAAAATAGAACAGAACTAATCATTGAAGAAATTATAGAAAGGAAACAAAATAAACAGATTATATGG-AGGATTTTTAGAAGataagtaaataaattaatatactaggaaaaaacaagggaaatataattgataaataaataCAGGTAAGAGTTCTTTTGAAATAATGATAAAATAGAAAATCTCTGTCAAAACTAAAAGGAAAGATGCataaatatataaataaatgataaaA-CGATGTTGCATACATATATGAC-TTTTTCAGAATC-AAAAAATTTAAATTTCTG---taataaaatttaaatgtttataaatttaaaaaactagaagaaagaatgttgactgttcacaatacaaataaatgacaaatatttgaggtgatggatatgctaattatccttatttgatcattggacattgtatacatgtatcaaaatatcactccgtatcccatgaatatgtacaatta i panTro5.chr1 C 0 C 0 s panPan2.chr4 168591736 2619 + 195804263 AACTACAATTGCTTCATCATGCCTGTTTGCAATTATAGGGCTTTTGAACCATTTGTTCCCTCCTTAGATATCGtcatttttttcagattcttgcttagaagtcactcctctgtggacctcctctgacatattaaacattgcaGTCCATtataagctgcaagaggacagggatttttgcctgttttattccctactgtatcaccaggggctacagcaatatctgacaaacagtgggcatgtaatgaatatgtgttaagtgaaGTAATAAATTCaatcaaatcacatcacctgtttaaagcacttcattggcttcacattgcact-----taaagagaaattctttttatacaatataagttcctgcagaatgcagacactttctacttctccagcctcttttcaactcctctcctactagcttctgtatttaagccacattagacctttcttcag-ttttttatatagactttgttgcatcacacctcagagattctgtacatgttcttcctcctgcctagaaaggatcgtccttccattttcgccaactaatccctgctcaacttttcatctcagcaggaggcccattctctttggcaatcctctggcctccagcccatttattatatactcacatgtcaacatgtacttcgtacagcatgtaacacaactgcacttttatattttaacaaattatatttcccatattgaactgtaagtctcctgaaaggaggaattttgttcttgctcatcatcaattttttcaacatccagtgcaccatttagaacttagatgtagtcaatacaggtttgtggaatgaaagaGGAAAAGAAAGAATTAATA---TTCCTTTAAATTAGGATGGCAAAGATCGTATATAGAAAATTGGCTAAGTTGTGGTCCATTCATATTTGCTCCCAATTAAGGAGCACAGCTATGAAAAGGAAGGCTTCAAATTAATAACCAATAGA-TTTTTTAAAAAAGAAAACTggccaggtactgtggcttatgtctgtaatatcagcatgttgggaggccaaggcaggattacttgagcccagaaattccagaccagcctgagaatttggcaaaactctgtctctacaaaaaatacaaaaattagccaagtttggtggcatgtgcctgtagtaccagctacttgggaggctgaggtggaagaatagcttgagtctgagaggtcaaggctgcaatgagctgtgatcgcaccactgcactcaaacctgggtgatagagtaagaccctgtctcaaaaaaaaaaagaa-----------aaTATCACTAAGCAAAATAAGACATGTGAAGTATCCTGTCAAAGATAAGAAAAATTAGGGGAACATTAAAAGCTTTCTTCCCAAGCCACTAAATCAACTTGACTAACAAAATTACAACTTGATTTAGCATT-AGAAAATTACATTACATATCAAACATAAACCCATTAATCAAATACTAAAGTAATTTCTAAGTTAAATGGTATAATGTTAGCTTATGCCAGAGCTGACCTGGAAAGATTGTTCAAATATGGCTCAGTGTGATTGAAAGTTCTGTGTGAATATGTTTTTGTAAAGATCCAACAGTAACTCCCTAGTGTATGTTTTTGAAATAAAATGTATCTGAGTAGCAGCAAAGTTATTCTCAAATTTCCATTTTATAGCCGGAGATGTTATATTGTGACATATATGATAGGACCCCATATGGATTAATCCCTTTTAGAAGTCAATCAGGAAGAGGGGAGCGGTTAAAACCGTTGCTCCGTTACAAACCGTTACAAGCATTAGAACAATTTTCTTATTCACACCATCTGATTATTGTATTTTATTTTTTCCCCAATGTTTAGACTACACAATGAGTTAAGAATGATAAAAATAAGCTCACCAATATACTATGTACGTATTTACCAAAATCTGTGCATGCCTATACATATAAACACAGCTGATAATTTATTAGTTAGGCTCATTTGTAGTTTTTGTCACTATAGACCAGCTTTTTATTTAAATTGAAGATTAGTATACATTTTAAATGATTAGTCAAAATAAAAAATCTAAAATGTGCTCTAAAT-ACCTCTTAGGTCAGAAAAAAAAA--------GCCAAAAGCTAGAATATAGAGAAATT---AAATGCCCTAAATTTCTAATCTGACAAAAATTCATACAAGATTTAAATATTTTAATGGAAAACAGAACAGAACTAATCATTGAAGAAATTACAGAAAGGAAACAAAATAAACAGATTATATGG-AGGATTTTTAGAAGataagtaaataaattaatatacta-gaaaaaacaagggaaatataattg----ataaataCAGGTAAGAGTTCTTTTGAAATAATGATAAAATAGAAAATCTCTGTCAAAACTAAAAGGAAAGATGCATAAATGTATATATAAATGATAAA---GATGTTGCATACATATATGACATTTTTCAGAATC-AAAAAATTTAAATTTCTG---TAATAAAATTTAAATGTTTATAAATGTaaaaaactagaagaa--aatgttgactgttcacaatacaaataaatgacaaatatttgaggtgatggatatgctaattatcctgatttgatcattggacattgtatacatgtatcaaaatatcactctgtatcccatgaatatgtacaatta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015413v1 1642157 2629 + 3967317 AACTGCAATTGCTTCATCATGCCTGCTTGCAATTATAGGGCTTTTGAACCATTTGTTCCCTCCTTAGATATcctcatttttttcagattcttgcttagaagtcactcctccgtggacctcctctgacatattaaacattgcaGTCCATtataagctgcaagaggacagggatttttgcctgttttattccctactgtatcaccaggggctacagcaatatctgacaaacagtgggcatgtaatgaatatttgttaagtgaaGTAAT-AATTCaatcaaatcacatcacctgtttaaagcacttcattggcttcacattgcacttagaataaagagaaattctttttatacaatataagttcctgcagaatgcagacactttctacttctccagcctcttttcaactcctctcctactagcttctgtatttaagccacattagacctttcttcag-ctttttatatagactttgttgcatcacacctcagagattctgtacatgttcttcctcctgcctagaaaggatcgtccctccactttcgccaactaatccctgctcaacttttcatctcagcaggaggcccattctctttggcaatcctctggcctccagcccatttattatatgctcacatgtcaacatgtacttcgtacagcatgtaacacaattgcacttttatattttaacaaattatatttcccatattgaactgtaagtctcctgaaaggaggaattttgttcttgctcatcatcaactttttcaacatccagtgcaccatttagaacttagatgtagtcaatacaggtttgtggaatgaaagaGGAAAAGAAAGAATTAATA---TTCCTTTAAATTAGGATGGCAAAGATCGTATATAGAAAATTGGCTAAGTTGTGGTCCATTCATGTTTGCTCCCAATTAAGGAGCACAGCTATGAAAAGGAAGGCTTCAAATTAATAACCAATAGATTTTTTTAAAAAAGAAAACTggccaggtactgtggcttatgtctgtaatatcagcatgttgggaggccaaggcaggattacttgagcccagaaattccagaccagcctgagaatttggcaaaactctgtctctacaaaaaatacaaaaattagccaagtttggtggcatgtgcctgtagtaccagctacttgggaggctgaggtggaagaatagcttgagtctgggaggtcaaggctgcaatgagctgtgatcgcaccactgcactcaagcctgggtggtagagtaagaccctgtctcaaaaaaaaaaaaaa-------aaaaaaaaTCACTAAGCAAAATAAGACATGTGAAGGATCATGTCAAAGGTAAGAAAAATTAGGGGAACATTAAAAGCTTTCTTCCCAAGCCACTAAATCAAGTTGACTAACAAAATTACCACTTGATTTAGCATT-AGAAAATTACATTACATATCAAACATAAACCCATTAATCAAATACTAAAGAAATTTCTGAGTTAAATGGTATAATGTTAGCTTATGCCAGAGCTGACCTTGAAAGATTGTTCAAATATGGCTCAGTGTGATTGAAAGTTCTGTGTGAATATGTTTTTGGAAAGATCCAACAGCAACACCTTAGTGTATGTTTTTGAAATAAAATGTATCTGAGTAGCAGCAAAGTTATTCTCAAATTTCCATTTTATAGCTGGAGATGTTATACCGTGACATATATGATAGGACCCAATATGGATTAATCCCTTTTAGAAGTCAATCAGGAAGAGGGGAGCAGTTAAAACAGTTGCTTGGT---------TTACAAACATTAGAACAATTTTCTTATTCACACCATCTGATTATTGTATTATATTTTTTCCCCAACGTTTAGACTACACAATGAGTTAAGAATGACAAAAATAAGCTCACCAATATACTATGTACATATTTACCAAAATCTGTGCATGCCTATACATATAAACACAGCTGATAATTTATTAGTTAGACTCATTTGTAATTTTTGTCACTATAGACCAGTTTTTTATTTAAATTGAAGATTAGTATACATTTTAAACGATTAGTCAAAATAAAAAATCTAAAATGTGCTCTAAAT-ACCTCTTAGGTCAGAAAAAAAAA--------GTCAAAAGCTAGAGTATAGAGAAATTAAGAAACGCCCTAAATTTCTAATCTGACAAAAATTCATACAAGATTTAAATATTTTAATGGAAAATAGAACAGAACTAATCATTGAAGAAATTATAGAAAGGAAACAAAATAAACAGATTATATGG-AGGATTTTTAGAAGataagtaaataaattaatatactacgaaaaaacaagggaaatataattgataaataaataCAGGTAAGAGTTCTTTTGAAATAATGATAAAATAGAAAATCTCTGTCAAAAC-AAAAGGAAAGATGCataaatatataaataaatgataaaaaaGATGTTGCATACATATATGAC-TTTTTCAGAATC-AAAAAATTTAAATTTCTG---taataaaatttaaatgtttataaatttaaaaaactagaagaaagaatgttgactgttcacaatacaaataaatgacaaatatttgaggtgatggatatgctaattatccttatttgatcattgg-cattgtatacatgtatcaaaatatcactctgtatcccatgaatatgtacaatta i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr7b 88122205 2636 + 115148730 AACTACAATTGCTTCATCATGCCTGCTTGCAGTTATACGGCTTTTGAACCATTTGTTCCCTCCTTAGATGTcctcacttttttcagattcttgcttagaagtcactcctctatggacctcttctgacatattaaacattgcaGTCCATtataagctgcaagaggacagggatttttgcctgttttatcccctactatatcaccaggggctacagcaataactgacaaatagtgggcatgtaatgaatatttgttaagtgaaGTAATAAATTCaatcaaatcacatcacctgtttaaagcacttcattggcttcacattgcacttagaataaagggaaattctttttatacaatataagttcctgcagaatgcagacactttctacttctccagcctcttttcaactcctctcctactagcttctgtatttaagccacattagacctttcctcag-ctttttatatagactttgttgcatcacacctcagagattctgtacatgttcttcctcctgcctagaaaggatcatccctccactttcgacaactaatccctgctcaacttttaatctcagcaggaggcccattctctttggcaatcctctgacctccagcccatttattatatgctcacatgtcaatatgtacttcgtacagcatgtaacacaattgcacttttatattttaacaaattatatttcccatattgaactgtacgtctcctgaaaggaggaattttgttcttgctcatcatcaa-tttttcaacatccagtgcaccatttagaacttagatgtggtcaatacaggtttgtggaatgaaagaGGAAAAGAAAGAATTAATA---TTCCTTTAAATTAGGATGGCAAAGATCATATATAGAAAATTGGCTAAGTTGTGGTCCATTCATGTTTGCTCCCAATTAAGGAGCACAGCTATGAAAAGCAAGGCTTCAAATTAATAACCAATAGATTTTTTAAAAAAAGAAAACTggccaggtgctgtgactcatgtctgtaatatcagcatgttggcaggccaaggcaggattacttgagcccagaaattcaagaccagcctgagaacctggcaaaactctgtctctacaaaaaatacaaaaattagccaagtttggtggcatgcgcctgtagtagcagctacttcagaggctaaggtggaagaatagcttgagtctgggaggtcaaggctgcaatgagctgtaatcgcaccactgcactcaagcctgggtggtagagtaagaccctgtctcaaaaaaaaaaaaaaaaagaaaaagaaaaaTCACTAAGCAAAATAAGACATGTGAAGGATCATGTCAAACGTAAGAAAAATTAGGGGAACATTACAATCTTTCTTCCCAAGACACTAAATCAACTTGACTAACAAAATTACAACTTGATTTAGCATTCAGAAAATTACATTACATATCAAACATAAACCCATTAATCAAATACTGAAGTAATTTCTGAGTTAAATGGTATAATGTTAGCTTATGCCAGAGTTGACCTTGAAAGATGGTTCAAATATGGCTCAGTGTGATTGAAAGTTCTATGTGAATTTGTTTTTGTAAAGATCCAACAGCAACACCTTAGTGTATGTTTTTGAAATAAAATGTATCTGAGTAGCAGCAAAGTTATTCTCAAATTTCCATTTTATAGCCGGAGATGTTATACCGTGACATATATGATAGGACCCAATATGGATTAATCCCTTTTAGAAGTCAATCAGGAAGAGGGGAGCAGTTAAAACAGTTGCTTGGC---------TTACAAACAATAGAACAATTTTCTTATTCACACCATCTGATTATTGTATTTTATTTTTTCCCCAAGGTTTAGACTACACAATGAGTTAAGAATGATAAAAATAAGCTCACCAATACCCTTTGTACATATTTACCAAAATCTGTGCATGTCTATACATATAAACACAGCTGATAATTTATTAGTTAGGCCCATTTGTAGTTTTTGTCACTATAGACCAGTTTTTTACTTAAATTGAAGATTAGTATAGATTTTAAATGATTAGTCAAAATAAGAAATCTAAAATGTGCTCTAAATAACCTCTTAGGTCAGaaaaaaaaaaaaaaaaaGCCAAAAGCTAGAATATAGAGAAATTGAGAAATGCCCTAAATTTCTAATCTGACAAAAATTCATACAAGATTTAAACATTTTAATGGAA-----AACAGAACTAATCATTGAAGAAATTACAGAAAGGAAACAAAATAAACAGATTATATGG-AGGATTTTTAGAAGataagtaaataaattaatatactaggaaaaaacaagggaaatataattg----ataaataCAGATAAGAGTTCTTTTGAAATAATGATAAAATAGAAAATCTCTGTCAAAACTAAAAGGAAAGATGCataaatatataaataaatgataaaA-AGATGTTGCATACATATATGACATTTTTCAGAATC--AAAAATTTAAATTTCTG---TAATAAAATTTtaatgtttataaatttaaaaaac--gaagaaagaatgttgattgttcacaatacaaataaatgacaaatatttgaggtgatggatatgctaattatcctgatttgatcattggacattgtataactgtatcaaaatatcactctgtatcccatgaatatgcacaatta i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 163587173 2516 + 189454096 AACTACAATTGCTTCATCATGCCTGCTTGCAATTACAGGGATTTTGAACCATTTGTTCACTCCTTGGATTTCCTCATTTTTTCCAGATTCTTGCTTAGAAGTCACTGCTCTATGGACCTCCTCTGACGTATTAAACATTGCAGTCCATtataagctgcaagaggacagggatttttgcctcttttattccctactgtatcaccaggggctacagcagtatctgacaaacagtgggcatgtaatgaatatttgttaagtgaaGTAATAAATTCaataaaatcacatcacctgtttaaagcacttcactagcttcacagtgcacttagaataaagagaaattctttttatacaatgtaagttcctgcagaatgcagacactttctacttctccagcctcttttcaactcctctcctactagcttctgtatttaagccacattagacctttcttcagtttttttatacagactttgttgcatcacatctcagagcttctgtacatgttcttcctcttgcctagaaaggatcatccctccactttcgccagctaatccctgctcaacttttaatctcagcaggaggcccattctctctggcaattctctggcctctaggccatttattatatgctcacatgtcaacatgtactttgtacagcatgtaacacaattgcacttttatattttaacaaattatatttcccatattgaactgtaagtctcctgaaaggaggaattttgttcttgctcatcatcaattttttcaacatccagtgcaCCATTTAGAATTTA----TAGTCAATACAGTGTTGTAGAATGATAGAGGAAAAGAAAGAATTAATAATGTTCCTTTAAATTAGGATGGCAAAGATCATATATAGAAAATTGGCTAAGTTGTGGTCCACTCATGTTTGCTCCCAATTAAGGAGCACAGCTATGAAAAGGAAGGCTTCAAATTAATAACCAATAGATTTTTTTAAAGAAGAAAACTggccaggtgctgtggctcatgtctgtaatatcagcatgttgagaggccaaggcaggattacttgagcccggaaactcaagaccagtctgagaacatggcaaaactctatctctacaaaaaatacaaaaattagccaagtttggtggcatgcgcctgtagtaccagctacctgggaggctgaggtggaagtatagcttgagtctgggaggtcaaggctgcaaagagctgtgattgcatcactgcactcaagcatgggtggtagagcaagaccctgtctcaacaaaaaagaaaa--------------aTCACTAAGCAAAATAAGACATGTGAAGGGTCATGTTAAAGGTAGGAAAAATTAGGGCAACATTAAAAGCTTTCTTCCCAAGCCACTAAATCAACTTGACTAACAAAATTACAACTTGATTTAGCATTCAGAAAATTACATTACATGTCAAACATATACCCATTAATCAAATAGTGAAGTAATTTCTGAGTTAAATGGTATGATGTTAGTTTATGCCAGAGTTGATCTTGAAAGATTGTTCAAATATGGCTCAGTGTGATTGAAAGTTCTGTGTGAATATGTTTTTGTAAAGATTCAACAGCAACACCTTAGTGTATGTTTTTGAAATAAAATGTATCTGAGTAGCAGCAAAGTTATTCTTAAATTTCAGTTTTATAGCCAGAAATGTTATACCCTAACATATATGATAGGATCCAATATAGATTAATCCCTTTTAGAAGTCAATCAGGAAGAGGAGGACAGTTAAAACAGTCGCTTGGC---------TTACAAACATTAGGACAACTTTCTTATTCACACCATCTGATTATTGTATTTCATTTTTTCCCCAAGATTTAGACTATACAATGAGTTAAGAATGATAAAAATAAGCTCACCAATACACTATGTACATATTTACCAAAATCTGTGCATGTCTATGCATATAAA-AAAGCTGATAATTTA----TTAGACTCATTTGTACTTTTTGTCACTATAGACCAGTTTTTTATTTACATTGAAGATT-------------------------------------------------------------------------AAGAA---------------------------------------ATACCCTAAATTTCTAATCTGACAAAAATTCACACAAGATTTAAATATTTTAATGGAAAATAAAACAGAAGTAATCATTGAAGAAGTTATAGAAAGGAAACAAAATAAACAGATTATATGGAAGGATTTTTAGAAGataagtaaataaattaatataccaggaaaaaacaagggaaatataattg----ataaataCAGATGAGAGTTCTTTTGAAATAATGATAAAATAGAAAATCTCTGTCAAAACTAAAGTGAAAGATGCataaatatataaataaatgataaaA-TGTTGTTGCATAC--ATATGACATTTTTCAGAATCAAAAAAATTTAAACTTCTGTAATAATAAAATTTAAATGTttataaattttaaaaactagaagaaagaatgttgaatgttcacaatacaaagaaatgacaaatatttgaggtgatggatatgctaattatcctgatttgatcatcagacattgtataaatgtatcaaaatatcactctgtat-ccatgaatatgtacaatta i macFas5.chr5 T 2717 N 0 a score=2120.000000 s hg38.chr3_KI270784v1_alt 4355 2 + 184404 tt s panTro5.chr1 222286005 2 + 228573443 tt i panTro5.chr1 C 0 C 0 s panPan2.chr4 168594355 2 + 195804263 tt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015413v1 1644786 2 + 3967317 tt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr7b 88124841 2 + 115148730 tt i nomLeu3.chr7b C 0 N 0 s macFas5.chr3 127816862 2 - 192294377 tc i macFas5.chr3 N 0 C 0 a score=1910.000000 s hg38.chr3_KI270784v1_alt 4357 2 + 184404 tg s panTro5.chr1 222286007 2 + 228573443 tg i panTro5.chr1 C 0 C 0 s panPan2.chr4 168594357 2 + 195804263 tg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015413v1 1644788 2 + 3967317 tg i gorGor5.CYUI01015413v1 C 0 C 0 s macFas5.chr3 127816864 2 - 192294377 tg i macFas5.chr3 C 0 C 0 a score=2255.000000 s hg38.chr3_KI270784v1_alt 4359 2 + 184404 tc s panTro5.chr1 222286009 2 + 228573443 tc i panTro5.chr1 C 0 C 0 s panPan2.chr4 168594359 2 + 195804263 tc i panPan2.chr4 C 0 N 0 s gorGor5.CYUI01015413v1 1644790 2 + 3967317 tc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr17 47249606 2 - 99891981 tc i nomLeu3.chr17 N 0 C 0 s macFas5.chr3 127816866 2 - 192294377 cc i macFas5.chr3 C 0 C 0 a score=7550.000000 s hg38.chr3_KI270784v1_alt 4361 13 + 184404 tcaaaaacaaaca s panTro5.chr1 222286011 13 + 228573443 tcaaaaacaaaCa i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015413v1 1644792 13 + 3967317 tcaaaaacaaaca i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr17 47249608 10 - 99891981 tcaaa---aaaca i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127816868 13 - 192294377 tcaaaaaacaaca i macFas5.chr3 C 0 I 2 a score=5291170.000000 s hg38.chr3_KI270784v1_alt 4374 2343 + 184404 aaaAaaagataatgggagaatgttgaaaactcagagagaagagcaactctcacagat-agggatccagataacattagcagctgatttctcggcagaa-accttgaaggccagtaggcagtggattatatatttaaaataatgaagaaacctgtcaattgagaaatatatagctggaaaacttatccttcaaaaatgaaggagaaattaagacatttccggatttttttttaaaactgaaaaaaa-tccatttatccctgaatttgacattcaggaagtgtt--aagtccttcaggttgaaataaatgaactctaggcaataactatgtaagtaaataagcaagctgtatgaatatacaaagctctctggtaaaggtaaatacataaacaaacataaaaacagtcctattgtaattttggtttgtaactctgctttttattttctacataatttaaaaggcaaatgcataaaatgtaattgtaaatctgttagctggtatacaatgaataaagatataatttgtcacatcaataacataaaaagagtagagctatatatatagcagtagaattttggtatgtgattgaacttaagttgaaataaattcaaattaaaatgttataactctaggatgttatatgtaattctcatagtaaccaaaaatgaaatatatatagaatataaacaaaaggaaatgagactagaaacaaaatgtgtcactac-aaaaaaatcaactaaagataaaaaag--aaataattgagaaaATGATTGGCAAAAATCAGTAACTCTGACGTATTAAAACTTTCCATGCTACATAAATCTGAAAACTCTATTTCACATAAAACTGGAGCTGAAAGAAACAAATATTTACCTATAAAGTTAAAAGTTATATAGGGAACAAACACTAATTTTTTTTTAG-AAAAAATTATAAAAAGAGTAAAAATATGCCTTATACTACC--GTAATTTCATGTTTTACAGCTCTGGGAAAATAGAAAATAAAATGTTCTGTTAGCATGAATCCCTCTGTGCCCCCAAAAAACCCTATGGATTGCATCATTATTACCTAAAAAGTCTATTCTCAAATGCAGCAGAGTGATATTTTTTACAAGGTAGATATTAATTTTAGATATGGAATAATATTGGTGATTTCAATTTT-ATAACACTGGGTTAAGATGAAAGAATGAGAAGATAAAGGTCCCTCAGCAATATAACTCACAAACATGTTCAGAAGCAGTAAGAAGTTACATTAATTATCTTTTGAAAGTCGATA-ATCTACATCTTTAATGTATGCATATAGCATAGCCAATGTACTATCGCTGGGtccatttattcaatgaataattgccgctatgtgtcagacatttttctaggcctaggaatggatacataagtgaacaaagcaaagattctggttcttgtagagtttccattAAAAGACAATTTAGTAAAACTTTTCTTCCCCCAAATTATAAAATCTGTAAGATGATTTAACAACATGTGTAAAAGTCATTGTGGGCCAGGCACGGTGGCTCATACCAGGTGTGGTGACTCATAGcactctgtcacccaggctggagtgcagtggcacaatctctgctcactgcaacctctgcctcctgggtacaagcgattctcctgcctcagctttctgagtagcaaggactacaggtgcacaccatcacgcctggctaatttttgtactattagtacagacggagtttcaccatgttggccaggctggtctcaaactcctgacctcaaatgatccgcccacctcggcctcccaaagtgctggaattacagatgtgagccacaatgcccggccTTATTTTCTACAACTTTGGTAACTTTAGCATATACCCCAAATCTGTAAGACATAATATTATAATTCAAATGCAATGCATGGCTTCTCTTTGTACT----CTTTCTCTAGCTTTTGAATTATTTATTCTAATACCAGTTTTAATTCTGACACAAAATCATGGGAGTTCTAATCAAAATCCAACCTTTTATCATAAAAACTATGAAGAAATTATG---AGTAGAATTTAAAAAGGAAAATAGGCCTATTAATTAGATTTGTCTTTGTAGCATTTAACTCTATAATAAATAA-----TATTTTATGCCTATGAGTCCCCAACAAAGCCTCCAGCTTCTATTTAGATATAAACTGTAAAAG----TCACTACTGGATCCACAAGCAAGACTATGGTAAATAAATTTCTCCACCTAACCAGCTTCTTTTACATGATGTTACATGTTTCTTTTGttttttca-ttttggcaaatattgat----tgtca---tcttcgtgtttgtctatgtcctaagtgc-tgggatacagaatctgaaaagatggacacagga s panTro5.chr1 222286024 2341 + 228573443 aacaaaagataatgggagaatgttgaaaactcagagagaagagcaactctcacagat-agggatccaggtaacattagcagctgatttctcggcagaa-accttgaaggccagtaggcagtggattatatatttaaaataatgaagaaacctgtcaattgagaaatctatagctggaaaacttatccttcaaaaatgagggagaaattaagacatttccggatttttttttaaaactgaaaaaaaatccatttatccctgaatttgccattcaagaagtgtt--aagtccttcaggttgaaataaatgaactctaggcaataactatataagtaaataagcaagctgtatgaatatacaaagctctctggtaaaggtaaatacataaacaaacataaaaacagtcctattgtaattttggtttctaactctgctttttattttctacataatttaaaaggcaaatgcataaaatgtaattgtaaatctgttagctggtatacaatgaataaagatataatttgttacatcaataacataaaaagagtagagctatatgtatagcagtagaattttggtatgtgattgaactt--gttgaaataaattcaaattaaaatgttataactctaggatgttatatgtaattctcatagtaaccaaaaacgaaatatacatagaatataaacaaaaggaaatgagactagaaacaaaatgtgtcactac-aaaaaaatcaactaaagataaaaaag--aaataattgagaaaATG----GCAAAAATCAGTAACTCTGACGTATTAAAACTTTCCATGCTACATAAATCTGAAAACTCTATTTCACATAAAACTGGAGCTGAAAGAGACAAATATTTACCTATAAAGTTAAAAGTTATATAGGGAACAAACACTAATTTTTTTT-AG-AAAAAATTATAAAAAGAGTAAAAATATGCCTTATACTACC--CCAATTTCATGTTTTACAGCTCTGGGAAAATAGAAAATAAAATGTTCTGTTAGCATGAATCCCTCTGTGCCCCCAAAAAACCCTATGGATTGCATCATTATTACCTAAAAAGTCTATTGTCAAATGCAGCAGAGTGATATTTTTTACAAGGTAGATATTAATTTTAGATATGGAATAATATTGGTGATTTCAATTTT-ATAACACTGGGTTAAGATGAAAGAATGAGAAGATAAAGGTCCCTCAGCAATATAACTCACAAACATGTTCAGAAGCAGTAAGAAGTTACATTAATTATCTTTTGAAAGTCAATA-ATCTACATCTTTAATGTATGCATATAGCATAGCTAATGTACTATCGCTGGGtccatttattcaatgaataattgccgctatgtatcagacatttttctaggcctaggaatggatacataagtgaacaaagcaaagattctggttcttgtagagtttccattAAAAGACCATTTAGTAAAACTTTTCTTTCCCCAAATTATAAAATCTGTAAGATGATTTAACAACATGTGTAAAAGTCATTGTGGGCCAGGCACGGTGGCTCATACCAGGTGTGGTGACTCATAGcactctgtcacccaggctggagtgcagtggcacaatctctgctcactgcaacctctgcctcctgggtacaagcgattctcctgcctcagctttctgagtagcaaggactacaggtgcacaccatcacgcctggctaatttttgtactattagtacagacggagtttcaccatgttggccaggctggtcttgaactcctgacctcaaatgatccgtctacctcggcatcccaaagtgctggaattacagatgtgagccacaatgcccggccTTATTTTCTACAACTTTGGTAACTTTAGCATATACCCCAAATCTGTAAGACATAATATTATAATTCGAATGCAATTCATGGCTTCTCATTGTACT----CTTTCTCTAGCTTTTGAATTATTTATTCTAATACCAGTTTTAATTCTGACACAAAAGCATGGGAGTTCTAATCAAAATCCAACCTTTTATCATAAAAACTATGAAGAAATTATG---AGTAGAACTTAAAAAGGTAAATAGGCCTATTAATTAGATTTGTCTTTGTAGCATTTAACTCTATAATAAATAACATAATATTTTATGCCTATGAGTACCCAACAAAGCCTCCAGCTTCTATTTAGATATAAAATGTAAA-G----TCACTACTGGATCCACAAGCAAGACTATGGTAAAGAAATTTCTCCACCTAACCAGCTTCTTTTACATGATGTTACATGTTTCTTTTGTTTTttca-ttttggcaaatattgat----tgtca---tcttcgtgtttgtctatgtcctaagtgc-tgggatacagaatctgaaaagatggacacagga i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015413v1 1644805 2342 + 3967317 aa-aaaagataatgggagaatgttgaaaactcagagagaagagcaactctcacagat-agggatccagataacattagcagctgatttctc-gcagaa-accttgaaggccagtaggcagtggattatatatttaaaataatgaagaaacctgtcaattgagaaatctatagctggaaaacttatccttcaaaaatgaaggagaaattaagacatttccggatttttttttaaaactgaaaaaaa-tccatttatccctgaatttgccattcaagaagtgtt--aagtccttcaggttgaaataaatgaactctaggcaataactatataagtaaataagcaagctgtatgaatatacaaagctctctggtaaaggtaaatacataaacaaacataaaaacagtcctattgtaattttggtttgtaactctgctttttattttctacataatttaaaaggcaaatgcataaaatgtaattgtaaatctgttagctggtatacaatgaataaagatataatttgttacatcaataacataaaaagagtagagctatatatatagcagtagaattttggtatgtgattgaacttaagttgaaataaattcaaattaaaatgttataactctaggatgttatatgtaattctcatagtaaccaaaaatgaaatatacatagaatataaacaaaaggaaatgagactagaaacaaaatgtgtcactac-aaaaaaatcaactaaagataaaaaag--aaataattgagaaaATGATTGGCAAAAATCAGTAACTCTGACGTATTAAAACTTTCCATGCTACATAAATCTGAAAACTCTATTTCACATAAAACTGGAGCTGAAAGAGACAAATATTTACCTATAAAGTTAAAAGTTATATAGGGAACAAACACTAATTTTTTT--AG-AAAAAATTATAAAAAGAGTAAAAATATGCCTTATACTACC---TAATTTCATGTTTTACAGCTCTGGGAAAATAGAAAATAAAATGTTCTGTTAGCATGAATCCCTCTGTGCCCCCAAAAAACCCTATGGATTGCATCATTATTACCTAAAAAGTCTATTCTCAAATGCAGCAGAGTGATATTTTTTACAAGGTAGATATTAATTTTAGATATGGAATAATATTGGTGATTTCAATTTT-ATAACACTGGGTTAAGATGAAAGAATGAGAAGATAAAGGTCCCTCAGCAATATAACTCACAAACATGTTCAGAAGCAGTAAGAAGTTACATTAATTATCTTTTGAAAGTCAATA-ATCTACATCTTTAATGTATGCATATAGCATAGCTAATGTACTATCGCTGGGtccatttattcaatgaataattgccgctatgtgtcagacatttttctaggcctaggaatggatacataagtgaacaaagcaaagattctggttcttgtagagtttccattAAAAGACCATTTAGTAAAACTTTTCTTCCCCCAAATTATAAAATCTGTAAGATGATTTAACAACATGTGTAAAAGTCATTGTGGGCCAGGCACGGTGGCTCATACCAGGTGTGGTGACTCATAGcactctgtcacccaggctggagtgcagtggcacaatctctgctcactgcaacctctgcctcctgggtacaagcgattctcctgcctcagctttctgagtagcaaggactacaggtgcacaccatcacgcctggctaatttttgtactattagtacagacggagtttcaccatgttggccaggctggtctcgaactcctgacctcaaatgatccacccacctcggcctcccaaagtgctggaattacagatgtgagccacaatgcccggccTTATTTTCTACAACTTTGGTAACTTTAGCATATA-CCCAAATCTGTAAGACATAATATTATAATTCAAATGCAACTCATGGCTTCTCATTGTACT----CTTTCTCTAGCTTTTGAATTATTTATTCTAATACCAGTTTTAATTCTGACACAAAAGCATGGGAGTTCTAATCAAAATCCAACCTTTTATCATAAAAACTATGAAGAAATTATG---AGTAGAATTTAAAAAGGAAAATAGGCCTATTAATTAGATTTGTCTTTGTAGCATTTAACTCTATAATAAATAACATAATATTTTATGCCTATGAGTCCCCAACAAAGCCTCCAGCTTCTATTTAGATATAAAATGTAAAAG----TCACTACTGGATCCACAAGCAAGACTATGGTAAAGAAATTTCTCCACCTAACCAGCTTCTTTTACATGATGTTACATGTTTCTTTTGTTTTttca-ttttggcaaatattgat----tgtca---tcttcgtgtttgtctatgtcctaagtgc-tgggatacagaatctgaaaagatggacacagga i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr17 47249618 2333 - 99891981 aaaaaaaGAC--TGTgagaatcttaaaagttcagagagaagagtaactctcacagacaagggatccgcttaacattagcagctgatttctcagcagaacacttggaaggccagtaggcagtggattatatatttaaaataatgaagaaacctgtcaactgagaaatctatagctggaaaacttgtccttcaaaaatgagggagaaattaagacatttccagattttttttaaaagctgaaaaga--tccatttatctctaaatttgccatacaagaagtgtt-aaagtccttcaggttgaaataaatgaactctaggcagtaattatataagtaaataagcaagttatatgaatatataaagctctctggtaaaggtaaatacataaacaaacataaaaacagtattattgtaattttggtttgtaactccgctttttattttctacaggatttaaaagacaaatgcataacatgtaattataaatctgttaggtggtgtacagtgaataaagatacaatttgttacatcaataatctaaaaagagtagagcta----tatagcagtagaattttggtatgtgattgaagttaagttgaaataaattcaaatcagaatgttataactctaggatgttatatgcaattttcatagtaaccaaaaacgaaatctacatagaacatacacaaaaggaaatgagaatagaaacaaaacttgtcactacaaaaaaaatcaactaaagataaaagaagtaaataattgagaaaatgactggcaaaaatcagtaactctgacatatgaaaacTTTCCATACTACATAAATCTGGAAACTCTATTTCACATGAAACTGGAGCTGAAAGAGACAAATATTTACTTATAAAGTTAAAAGTTATATGGAAAACCAACACTAATTTTTTTT-AG-AAAAAATTATGGAAAAAGTAAAAATATGCCTTATAGTATCATATAATATCATGTTTTATAGCTCTTGGAAAATGGAAAATAAAATGTTCTGTTAGCATGAATCCTTCTGTGCTCTC-AAAAACCCTATGGATTATACCATTATTACCTAAAAAGTCTATTCTCAAATGCAGCAGA--GATAATTTTTATAAGGTAGATGTTATTTTTAAATATGGGATAATATTGGTGATTTCAGTTTTAATAACATTGGATTAAGATGAAAGAATAAGAAGATAAAGGCCCCTCAGCAATATAACTCACAAACATGTTCAGAAGCAGTGAGAAGTTATATTAATTATGTTTTGAAAGTCAATA-ATCTACATTTTTAATGTATGCGTATAGCGTAGCTAATGTACTATTGCTGGGtccgtttattgaaggaataattgccgctgtgtgtcagacattgctctagccctaggaatggattcataagtgaacaaagcaaagattctggttcctgtagagtttccattAAAAGACCATTTAGGAAAATTTTTCTTCCCCCAAATTATGAAATCTGTAAGATCATTTAACAATATGTATAAAAGTCATTGTGGGCTGGGCACGGTGGCTCATACCAGGTGTGGTGACTC--AGTgctctgtcacccaggctggagtgcagtagcacactctctgctcactgcaacctctgcctcctgggtacaagagattctcctgcctcagctttccgagtagcagggactacaggtgcacaacaccacacccggctaacttttgtattattagtagaggtggggtttcgtcatgttggccgggctgttctcaaactcctgaccgcaagtgatccacccacctcggcctcccaaagtgctgggattacaggcgtgagccaccacacccggccTTATTCTCTACAACTTTGATGACTTTGGCATATACCCCAAATCTGTAACCTATAATATTATCATTCAAATGTAACTCATGGCTTCTCATTGTACTCTGACTTTCTCTAGCTTTTGAATTCTTTATTCTAATATCAGTTTTAAGTCTGACACAAAAGCATGGGAGTTCTAATCAAAATCCAACCTTTTATCATAAAAACTGTCAAGAAATTATGAGTAGTAGAATTTAAAAAGGAAAATAGGCCTATTAATTAGATTTGT--------------------------ATAACTTAACGTTTTATGCCTATGAGTCCCCAACAAAGCCCCCAGCTTCTATTTGGATATAAAATGTAAAAGTCACTCACTACTGGATCCAAAAGCAGGACTATGGTAAATAAATTTCTCCACCTAACCAGCTCCTTTTACATGATGCTACATGTTTCTTTTGTTTTttca-ttttggcaaatattgattgaatgtca---tctttgtgttagtgtacgtcctaagtgc-caagatacagaatctgaaaagatggacacagga i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127816883 2307 - 192294377 aaaaaaagacaatgtgagaatcttgaaagctcagagagaagagcaactctcacagacaagggatgcagataacattagcagctgatttctcagcagaaaacttggaaggccagtaggcagtggattatatatttaaaataatgaagaaatctgtcaattgagaaatctgtagctggaaaacttgtccttcaaaaatgagggagaaattaagacatttccagctttttttttaaagctgaaaaaa--tccatttatctctaaatttgcgatataagaagtgttaaaagtccttcaggttgaaataaataaactctaggcattaatgctataagtaaataagcaagctatatgaatatataaagctctctggtaaaggtaaatacat----aaacataaaaacagtattattgtaattttggttcgtaactccactttttattttctataagatttaaaagaaaaatgcataaaatgtaattataaatctgttaggtggtgtacaatgaataaagatataatttgttacatcaataacctaaaaagagtagagcta----tatagcagtagaattttggtatgtgattgaagttaagttgaaataaattcaaattagaatgttataactctaggatgttatatgtaattttcatagtaaccaaaaatgaaatatacatagaatatacacaaaaggaaatgagaatagaaacaaaacttgtcactacaaaaaaaatcaactaaagataaaagaagtaaataattgagaaaATGACTGGCAAAAATCAGTAACTCTGACTTATTAAAATTTTCCATGCTACATAAATCTGGAAATTCTATTTCACATAAAACTGGAGCTGAAAGAGACAAATATTTACTTACAAAGTTAAAAGTTATATGGAAAACAAACA------TTTTTT-AG-AAAAAATTATGAAAACAGTAAAAATATGCCTtatactatcatataatatcatattttataGCTCTTGGAAAATAGAAAATAAAATG-TCTGTTAGCATGAATCCTTCTGTGCCCTC-AAAAACCCTATGGATTATACCATTATTACCTAAAAAGTCTATTCTCAAATGCAGCAGAGTGATAATTTTTATAAGGTAGATATTATTTTTAAATAT-GAATAATATTGTTGATTTCAGTTTTAATAACATTGGGTTAAGATGAAAGAATGAGAAGATAAAGGTCCCTCAGCAATGTAACTCACAAACATGTTCAGAAGCAGTAAGAAGTTACATTAATTATCTTTTGAAAGTCAATA-ATCTACATCTTTAATGTATGCATATAGCATAGCTAATGTACTATTGCTGGGtccatttattcaacaaataatcgccgctatgtgtcagatattgttctaggcctaggaaagaatatataagtgaacaaagcaaagattctggttcttgtagagtttccattAAAAGACCATTTAGTAAAAGTTTTCTTCCCCCAAATTATAAAATCTGTAAGATGATTTAACAACATGTATAAAAGTCATTGTGGGCTGGGCATGGTGGCTCATACCAGGTGTGGTGACTCATAGcgctctgtcattcaggctggagtgcagtggcacaatctctgctcactgcaacctctgcctcccgggtacaagcgattctcctgcctcagctttccgagtagcagggactgcagatgcacaacaccacacctggctaact---------ttagtagaaatggggtttcgccatgttggctgggctggtcttaaactcctgacctcaagtgatctgcccacctccacctcccaaagcgctgggattacaggtgtgagccacctcacccggccGTATTTTCTACAACTTTGATAACTTTAGCATATACTCCAAATCTGTAAGACATAATATTATCATTCAGATGCAACTCATGGCTTCTCACTGTACTCTGACTTTCTCTAGCTTTTGAATTCTTTATTCTAATATCAGTTTTAAGTCTGACACAAAAGCATGGGAGTTCTCATCAAAATCCAACCGTTTATCATAAAAACTATC---AAATTATT---AATAGAATTTAAAATGGAAAATAGGCCTATTAATTAGATTTGT--------------------------ATAACTTAATATTTTATGCCTGTGAGTCCCCAGCAAAGCCTCCAGCTTCTATTTGGATATAAAATGTAA--G----TCACTACTGGATCCACAAGCAGGACTATGGTAAAGAAATTTCTCCATCTAACCAGCTCCTTTTACACAATGTTACATGTTTCTTTTGTTTTttca-ttttggcaaaaattgattgactatca---tcttcgtgttagtctgcgtcctaagtgc-cgagatacagaatctaaaaagatggacacagga i macFas5.chr3 I 2 C 0 s macNem1.NW_012012500v1 37387 2317 + 413781 aaaaaaagacaatgtgagaatcttgaaagctcagagagaagagcaactctcacagacaagggatccagataacattagcagctgatttctcagcagaaaacttggaaggccagtaggcagtggattatatatttaaaataatgaagaaatctgtcaattgagaaatctgtagctggaaaacttgtccttcaaaaatgagggagaaattaagacatttccagctttttttttaaagctgaaaaaa--tccatttatctctaaatttgcgatataagaagtgttaaaagtccttcaggttgaaataaataaactctaggcattaatgctataagtaaataagcaagctatatgaatatataaagctctctggtaaaggtaaatacataaacaaacataaaaacagtattattgtaattttggtttgtaactccgctttttattttctataggatttaaaaggtaaatgcattaaatgtaattataaatttgttaggtggtgtacaatgaataaagatataatttgttacatcaataacctaaaaagagtagagcta----tatagcagtagaattttggtatgtgattgaagttaagttgaaataaattcaaattagaatgttataactctaggatgttatatgtaattttcatagtaaccaaaaatgaaatatacatagaatatacacaaaaggaaatgagaatagaaacaaaacttgtcactacaaaaaaaatcaactaaagataaaagaagtaaataattgagaaaATGACTGGCAAAAATCAGTAACTCTGACTTATTAAAATTTTCCATGCTACATAAATCTGGAAATTCTATTTCACATAAAACTGGAGCTGAAAGAGACAAATATTTACTTACAAAGTTAAAAGTTATATGGAAAACAAACAC-----TTTTTT-AG-AAAAAATTATGAAAACAGTAAAAATATGCCTTATACTATCATATAATATCCTATTTTATAGCTCTTGGAAAATAGAAAATAAAATG-TCTGTTAGCATGAATCCTTCTGTGCCCTC-AAAAACCCTATGGATTATACCATTATTACCTAAAAAGTCTATTCTCAAATGCAGCAGAGTGATAATTTTTATAAGGTAGATATTATTTTTAAATAT-GAATAATATTGTTGATTTCAGTTTTAATAACATTGGGTTAAGATGAAAGAATGAGAAGATAAAGGTCCCTCAGCAATGTAACTCACAAACATGTTCAGAAGCAGTAAGAAGTTACATTAATTATCTTTTGAAAGTCAATA-ATCTACATCTTTAATGTATGCATATAGCATAGCTAATGTACTATTGCTGGGtccatttattcaacaaataatcgccgctatgtgtcagatattgttctaggcctaggaaagaatacataagtgaacaaagcaaagattctggttcttgtagagtttccattAAAAGACCATTTAGTAAAAGTTTTTTTCCCCCAAATTATAAAATCTGTAAGATGATTTAACAACATGTATAAAAGTCATTGTGGGCTGGGCATGGTGGCTCATACCAGGTGTGGTGACTCATAGcgctctgtcattcaggctggagtgcagtggcacaatctctgctcactgcaacctctgcctcccgggtacaagcgattctcctgcctcagctttccgagtagcagggactgcagatgcacaacaccacacctggctaact---------ttagtagaaatggggtttcgccatgttggctgggctggtcttaaactcctgacctcaagtgatctgcccacctccacctcccaaagtgctgggattacaggtgtgagccacctcacccggccGTATTTTCTACAACTTTGATAACTTTAGCATATACTCCAAATCTGTAAGACATGATATTATCATTCAGATGCAACTCATGGCTTCTCACTGTACTCTGACTTTCTCTAGCTTTTGAATTCTTTATTCTAATATCAGTTTTAAGTCTGACACAAAAGCATGGGAGTTCTCATCAAAATCCAACCGTTTATCATAAAAACTATCAAGAAATTATT---AATAGAATTTAAAAAGGAAAATAGTCCTATTAATTAGATTTGT--------------------------ATAACTTAATATTTTATGCCTGTGAGTCCCCAACAAAGCCTCCAGCTTCTATTTGGATATAAAATGTAA--G----TCACTACTGGATCCACAAGCAGGACTATGGTAAAGAAATTTCTCCATCTAACCAGCTCCTTTTACACAA--GTACATGTTTCTTTTGTTTTttcatttttggcaaaaattgattgactatcaatcccttcgtgttagtctgcgtcctaagtgcttgagatacagaatct-aaaagatggacacagga i macNem1.NW_012012500v1 N 0 I 27 s chlSab2.chr21 124231265 2309 - 127223203 aaaaaaagacaatgtgagaatcttgaaagctcagagagaagaacaactctcacagacaagggatccagataacattagcagctgatttctcagcagaaaacttggaaggccagtaggcagtagattatatatttaaaataatgaagaaacctgtcaattgagaaatctgtagctggaaaacttgtcc-tcaaaaatgagagagaaattaagacatttccaactttttttaaaaagctgaaaaaa--tccatttatctctaaatttgcgatataagaagtgttaaaagtccttcaggttgaaataaataaactctaggcattaatgctataagtaaataagcaagctatatgaatatataaagctctctggtaaaggtaaatacataaacaaacataaaaacagtattattgtaattttggtttgtaact--gctttttattttctacaggatttaaaagacaaatgcataaattgtaattataaatctgttaagtggtatacagtgaataaagatataatttgctacatcaataacataaaaacagtagagcta----tatagcagtagaattttggtatgtgattgaagttaagttgaaataaattcaaattagaatgttataactctaggatgttatgtgtaattctcatagtaaccaaaaatgaaatatgcatagaatataaacaaaaggaaatgagaatagaagcaaaacttgtcactacaaaaaaaatcaactaaagataaaagaagtaaataattgagaaaATGACTGGCAAAAATCAGTAACTCTGACTTATTAAAATTTTCCATGCTACATAAATCTGGAAATTCTATTTCACATAAAACTGGAGCTGAAAGAGACAAATATTTACTTACAAAGTTAAAAGTTATATGGAAAACAAACAC-----TTTTTT-AG-AAAAAATTATGAAAACAGTAAAAATATGCCTtatactatcatataatatcatattttataGCTCTTGGAAAATAGAAAATAAAATG-TCTGTTAGCATGAATCCTTCTGTGCCCTC-AAAAACCCTATGGATTATACCATTATTACCTAAAAAGTCTATTCTCAAATGCAGCAGAGTGATAATTTTTATAAGGTAGATATTATTTTTAAATAT-GAATAATATTGTTGATTTCAGTTTTAATAACATTGGGTTAAGATGAAAGAATGAGAAGATAAAGGTCCCTCAGCAATGTAACTCACAAGCATGTTCAGAAGCAGTAAGAAGTTAC----ATTATCTTTCGAAAGTCAATATATCTGCATTTTTAATGTATGCATATAGCATAGCTAATGCACTATTGCTGGGtccatttattcaacaaataatcgccgctatgtgtcagatattgttctaggcctaggaaagaatacataagtgaacaaagcaaagattctggttcttgtagagtttccattAAAAGACCATTTAGTAAAAGTTTTCTTCCCCCAAATTATAAAATCTGTAAGATGATTTAACAACATGTATAAAAGTCATTGTGGGCTGGGCATAGTGGCTCATACCAGGTGTGGTGACTCATAGcgctctgtcattcaggctggagtgcagtggcacaatctctgctcactgcaacctctgcctcccgggtacaagcgattctcttgcctcagctttccgagtagcagggactacagatgcacaacagcacacctggctaact---------ttagtagagatggggtcttgccatgttggctgggctggtcttaaactcctgacctcaagtgatctgcccacctccacctcccaaagtgctgggattacaggtgtgagccacctcacccggccTTATTTTCTACAACTTTGATAACTTTAGCATATACTCCAAATCTGTAAGACATAATATTATCATTCAGATGCAACTCATGGCTTCTCACTGTACTCTGACTTTCTCTAGCTTTTGAATTCTTCATTCTAATATCAGTTTTAAGTCTGACACAAAAGCATGGGAGTTCTCATCAAAATCCAACCGTTTATCATAAAAACTATCAAGAAATTATT---AGTAGAATTTAAAAAGGAAAATAGGCCTATTAATTAGATTTGT--------------------------GTAACTTAATATTTTATGCCTGTGAGTCCCCAACAAAGCCTCCAGCTTCTATTTGGATATAAAATGTAA--G----TCACTACTGGATCCACAAGCAGGACTATGGTAAAGAAATTTCTCCACCTAACCAGCTCCTTTTACACGATGTTACATGTTTCTTTTGTTTTttca-ttttggcaaaaatttattgactatca---tcttcgtgttagtctgcgtcctaagtgc-cgagatacagaatctaaaaagatggacacagga i chlSab2.chr21 N 0 C 0 s manLeu1.NW_012100344v1 133493 2312 - 148006 aaaaaaagacaatgtgagaatcttgaaagctcagagagaagagcaactctcacagacaagggatccagataacattagcagctgatttctcagcagaaaacctggaaggccagtaggcagtggattatatatttaaaataatgaagaaacctgtcaattgagaaatctgtagctggaaaacttgtccttcaaaaatgagggagaa---aagacatttccagcttttttttaaaagctgaaaaaa--tccatttatctctaaatttgcgatataagaagtgttaaaagtccttcaggttgaaataaataaactctaggcattaatgctataagtaaataagcaagctgtgtgaatatataaagctctctgataaaggtaaatacataaacaaacataaaaacagtattattgtaattttggtttgtaactccactttttattttctataagatttaaaagaaaaatgcataaaatgtaattataaatctgttaggtggtgtacaatgaataaagatataatttgttacatcaataacctaaaag-agtagagcta----tataacagtagaattttggtatgtgattgaagttaagttgaaataaattcaaattagaatgttataactctaggatgttatatgtaattttcatagtaaccaaaaatgaaatatacatagaatatacacaaaaggaaatgagaatagaaacaaaacttgtcactacaaaaaaaatcaactaaagataaaagaagtaaataattgagaaaATGACTGGCAAAAATCAGTAACTCTGACTTATTAAAATTTTCCATGCTACATAAATCTGGAAATTCTATTTCACATAAAACTGGAGCTGAAAGAGACAAATATTTACTTACAAAGTTAAAAGTTATATGGAAAACAAACAC-----TTTTTT-AGAAAAAAATTATGAAAACAGTAAAAATATGCCTtatactatcatataatatcatattttataGCTCTTGGAAAATAGAAAATAAAATG-TCTGTTAGCATGAATCCTTCTGTGCCCTC-AAAAACCCTATGGATTATACCATTATTACCTAAAAAGTCTATTCTCAAATGCAGCAGAGTGATAATTTTTATAAGGTAGATATTATTTTAAAATAT-GAATAATATTGTTGATTTCAGTTTTAATAACATTGGGTTAAGATGAAAGAATGAGAAGATAAAGGTCCCTCAGCAATGTAACTCACAAACATGTTCAGAAGCAGTAAGAAGTTACATTAATTATCTTTTGAAAGTCAATA-ATCTACATCTTTAAGGTATGCATATAGCATAGCTAATGTACTATTGCTGGGtccatttattcaacaaataatcgccgctatgtgtcagatattgttctaggcctaggaaagaatacataagtgaacaaagcaaagattctggttcttgtagagtttccattAAAAGACCATTTAGTAAAAGTTTTCTTCCCCCAAATTATAAAATCTGTAAGATGATTTAACAACATGCATAAAAGTCATTGTGGGCTGGGCATGGTGGCTCATACCAGGTGTGGTGACTCATAGcgctctgtcattcaggctggagtgcagtggcacaatctctgctcactgcaacctctgcctcccgggtacaagcgattctcctgcctcagctttccgagtagcagggactacagatgcacaacaccacacctggctaact---------ttagtagagatggggtttcgccatgttggctgggctggtcttaaactcctgacctcaagtgatctgcctacctccacctcccaaagtgctgggattacaggtgtgagccacctcacccggccTTATTTTCTACAACTTTGATAACTTTAGCATATACTCCAAATCTGTAAGACATAATATTATCATTCAGATGCAACTCATGGCTTCTCACTGTACTCTGACTTTCTCTAGCTTTTGAATTCTTTATTCTAATATCAGTTTTAAGTCTGACACAAAAGCATGGGAGTTCTCATCAAAATCCAACCATTTATCATAAAAACTATCAAGAAATTATT---AGTAGAATTTAAAAAGGAAAATAGGCCTATTAATTAGATTTGT--------------------------ATAACTTAATATTTTATGCCTGTGAGTCCCCAACAAAGCCTCCAGCTTCTATTTGGATATAAAATGTAA--G----TCACTACTGGATCCACAAGCAGGACTATGGTAAAGAAATTTCTCCACCTAACCAGCTCCTTTTACACGATGTTACATGTTTCTTTTGttttttca-ttttggcaaatattgattgactatca---tcttcgtgttagtctgcgtcctaagtgc-cgagatacagaatctaaaaagatggacacagga i manLeu1.NW_012100344v1 N 0 C 0 a score=20539.000000 s hg38.chr3_KI270784v1_alt 6717 19 + 184404 cctgccttcaag---ttcaccc s panTro5.chr1 222288365 19 + 228573443 cctgccttcaag---ttcaccc i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015413v1 1647147 19 + 3967317 cctgccttcaag---ttcaccc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr17 47251951 16 - 99891981 cctgccttctgg------gcct i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127819190 22 - 192294377 cctgccttctgggagttcacac i macFas5.chr3 C 0 I 6 s chlSab2.chr21 124233574 22 - 127223203 cctgccttctgggagttcacac i chlSab2.chr21 C 0 I 1 s manLeu1.NW_012100344v1 135805 22 - 148006 cctgctttctgggagttcacat i manLeu1.NW_012100344v1 C 0 I 13 e macNem1.NW_012012500v1 39704 27 + 413781 I a score=119524.000000 s hg38.chr3_KI270784v1_alt 6736 54 + 184404 cctttttttttttttttt-----------gagatgcagttttgctcttgtcacccaggctggagt s panTro5.chr1 222288384 65 + 228573443 tttttttttttttttttttttttttttttgagatggagttttgctcttgtcgcccaggctggagt i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015413v1 1647166 59 + 3967317 tttttttttttttttttt------tttttgagatggagttttgctcttgtcacccaggctggagt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr17 47251967 54 - 99891981 tttttttttttttttttt-----------gaggtggagttttgctcttgtcacccaggctggagt i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127819218 54 - 192294377 tttttttttttttttttt-----------gaggcggagttttgctcttgtcacccaggctagagt i macFas5.chr3 I 6 C 0 s macNem1.NW_012012500v1 39731 54 + 413781 tttttttttttttttttt-----------gaggcggagttttgctcttgtccccaaggctagagc i macNem1.NW_012012500v1 I 27 I 22 s chlSab2.chr21 124233597 52 - 127223203 --tttttttttttttttt-----------gaggcggagttttgctcttgtcacccaggctagagt i chlSab2.chr21 I 1 C 0 s manLeu1.NW_012100344v1 135840 54 - 148006 tttttttttttttttttt-----------gaggcggagttttgctcttgtcacccaggctagagt i manLeu1.NW_012100344v1 I 13 C 0 a score=32384.000000 s hg38.chr3_KI270784v1_alt 6790 22 + 184404 gtaatggtgagatctctgctca s panTro5.chr1 222288449 22 + 228573443 gtaatggtgagatctcggctca i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015413v1 1647225 22 + 3967317 gtaatggtgagatctctgctca i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr17 47252021 22 - 99891981 gcaatggtgagatcttggctca i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127819272 22 - 192294377 ccaatggtgagttcttggctca i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124233649 22 - 127223203 ccaatggtgagttcttggctca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 135894 22 - 148006 ccaatggtgagttcttgtctca i manLeu1.NW_012100344v1 C 0 C 0 e macNem1.NW_012012500v1 39785 22 + 413781 I a score=1146779.000000 s hg38.chr3_KI270784v1_alt 6812 487 + 184404 ctgcaacctccacctccagggttcaagtgattctcctgcctcagcctcccaagtagctgggattacaggtcccagccaccacgcctagctaatttttgtatttttagtagagacagcgtttcatcatgttggtcaggctggtctcgaactcctaacctcaggtagtcgacccacctcggcctcccacagtgctgagattacaggcatgagccaccacgccctgctaggagttcacgctttagttggggaaaatatacaataagcaagccagtttttaaaatgagaactgcaattagagttaaatgctacaaagacaaactcacaggaagatgggatgtagaatgataaggCTCT----CAGAATAGTAAGAGAAACTATTGCTTCTTACGATGTTTGTCTTTCTTTGTATCGGTGCTCAGCTGAGTCTGCAGTGCTTCAGAGGCAGCTTTCATTTTATAAAAATCTATGATTTCTCCTTCCAGTTGTTTTT s panTro5.chr1 222288471 487 + 228573443 ctgcaacctccacctccagggttcaagtgattctcctgcctcagcctcccaagtagctgggattacgggtcccagccaccacgcctagctaatttttgtatttttagtagagacagcgtttcatcatgttggtcaggctggtctcgaactcctaacctcaggtagtcgacccacctcggcctcccacagtgctgagattacaggcatgagccaccacgccctgctaggagttcacactttagttggggaaaatatacaataagcaagccaatttttaaaaagagaactgcaattagagttaaatgctacaaagacaaactcacaggaagatgggatgtagaatgataaggCTCT----CAGTATAGTAAGAGAAACTATTGCTTCTTACAATGTTTGTCTTTCTTTGTATCAGTGCTCAGCTGAGTCTGCAGTGCTTCAGAGGCAGCTTTCATTTTATAAAAATCTATGATTTCTCCTTCCAGTTGTTTTT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015413v1 1647247 486 + 3967317 ctgcaacctccacctccagggttcaagtgattctcctgcctcagcctcccaagtagctgggattacaggtcccagccaccacgcctagctaatttttgtatttttagtagagacagcgtttcatcatgttggtcaggctggtctcgaactcctaacctcaggtagtcgacccacctcggcctcccacagtgctgagattacaggcatgagccaccatgccctgctaggagttcacgctttagttggggaaaatatacaataagcaaGCCA-TTTTTAAAATGAGAACTGCAATTAGAGTTAAATGCTACAAAGACAATCTCACAGGAAGATGGGATGTAGAATGATAAGGCTCT----CAGAATAGTAAGAGAAACTATTGCTTCTTACGATGTTTGTCTTTCTTTGTATCAGTGCTCAGCTGAGTCTGCAGTGCTTCAGAGGCAGCTTTCATTTTATAAAAATCTATGATTTCTCCTTCCAGTTGTTTTT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr17 47252043 487 - 99891981 ctgcaacctccacctctggggttcaagtgattctcctgcctcaacctcccaagtggctgggattacaggtaccggccaccatatccagctaatttttgtatttttagtagaggcagggtttcatcattttggtcaggctggttttgaactcctgacctcaggtggtccactcgcctcagcctcccaaagtgctgggattacaggcatgagccaccacaccccgctaggagttcacactttagctagggaaaatatacaataagcaagccaatttttaaaatgagaacttcaatcagagttaaatgctacaaagacaaTCTCACAGGAAGTTGCGATGTAGAATGATAGGACTCT----CAGAATAGTAAGAGAAACTATTATTTCTTACGATGTTTGTCTTTCTTTGTATCGGTGCTCAGCTGAGTCTGCAGTGCTTCAGAGGCAGCTTTCATTTTATAAAAATCTATGATTTCTACTTCTAGTTGTTTTT i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127819294 490 - 192294377 ctgcaacctctacctccggggttcaagtgattctcctgcctcagcctcccaagtagctgggattacaggtaccagtcaccacgcccagataatttttgtatttttagtagagacagggtttcatcattttggtcaggctggtcttgaactcctgacctcgggtggtccacccgcgtcagcctcctaaagtgctgagattataggcatgagccaccacgccctgctaggagttcaca-tttagttggggaaaatatacaataagcaagccaatttttaaaatgagaatttcaatcagagttaaatgccacaaagacaatctcacagaaagttgggatgtagaatgatagggCTCTCAAACAGAATAGTAAGAGAAACTATTATTTCTTACGATGTTTGTCTTTCTTTGTATCGGTACTCAGCTGAGTCTGCAGTGCTTCAGAGGCAGCTTTCATTTTATAAAAATCTATGATTTCTCCTTCCAGTTGTTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012012500v1 39807 485 + 413781 ctgcaacctctacctcc-gggttcaagtgattctcctgcctcagcct-ccaagtagctgggattacaagtaccagt--ccacgcccagat-atttctgtatttttagtagagacagggtttcatcattttggtcaggctggtcttgaactcctgacctcgggtggtccacccgcgtcagcctcctaaagtgctgagattataggcatgagccaccacgccctgctaggagttcaca-tttagttggggaaaatatacaataagcaagccaatttttaaaatgagaatttcaatcagagttaaatgccacaaagacaatctcacagaaagttgggatgtagaatgatagggCTCTCAAACAGAATAGTAAGAGAAACTATTATTTCTTACGATGTTTGTCTTTCTTTGTATCGGTACTCAGCTGACTCTGCAGTGCTTCCGAGGCAGCTTTCAGTTTATAAAAATCTATGATTTCTCCTTCCAGTTGTTTTT i macNem1.NW_012012500v1 I 22 M 934 s chlSab2.chr21 124233671 491 - 127223203 ctgcaacctctacctccggggttcaagtgattctcctgcctcggcctcccaagtagctgggattacaggtaccagtcaccacgcccagataatttttgtatttttaatagagacagggtttcatcattttggtcaggctagtcttgaactcctgacctcgggtggtccacccgcgtcagcctcctaaagtgctgggattataggcatgagccaccacgcccggctaggagttcacactttagttggggaaaatatacaataagcaagccaatttttaaaatgagaatttcaatcagagttaaatgctacaaagacaatctcacagaaagttgggatgtagaatgatagggCTCTCAAACAGAATAGTAAGAGAAACTATTATTTCTTACGATGTTTGTCTTTCTTTGTATCGGTACTCAGCTGAGTCTGCAGTGCTTCAGAGGCAGCTTTCAGTTTATAAAAATCTATGATTTCTCCTTCCAGTTGTTTTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 135916 491 - 148006 ctgcaacctctacctctggggttcaagtgattctcctgcctcagcctcccaagtagctgggattataggtaccagtcaccacgcccagataatttttgtatttttagtagagacagggtttcatcattttggtcaggctggtcttgaactcctgacctcgggtggtccacccgcgtcagcctcctaaagtgttggcattataggcatgagcaaccacgccctgctaggagttcacactttagttggggaaaatatacaataagcaagccaatttttaaaatgagaatttcaatcagagttaaatgctacaaagacaatctcacagaaagttgggatgtagaatgatagggCTCTCAAACAGAATAGTAAGAGAAACTATTATTTCTTACGATGTTTGTCTTTCTTTGTATCGGTACTCAGCTGAGTCTGCAGTGCTTCAGAGGCAGCTTTCATTTTATAAAAATCTATGATTTCTCCTTCCAGTTGTTTTT i manLeu1.NW_012100344v1 C 0 C 0 a score=840339.000000 s hg38.chr3_KI270784v1_alt 7299 497 + 184404 TCTCTTCCTCGAGCTTCCTTATCTCCTCCTGTTGAATCATTTTAAGATGCTCGAACTTGTCCTGCAGCTGTGAAACCAATGTGCAGTTGTGACACCAAAG--CAGTGTGGCTGAACACCTAAAAGAATACGCTTTTTTTCTGATTATCAAACAAACCCAAATCATCACAGTAGAGCACGATCTTAATAACAATCTCAAAAACTCAGGAGTAAACACTCAGATATGGAAtttttcttttctttcttttttccttttataagatggagtctcactctgttgcccaggctggagtgcactggtgcgatctcagctcactgcaacctccatctcccagttcaagtgattctcctgcctcagcctcttgagtagctgggactataggcatgcatcaccactacaggcgtgtgccaccacacctggctaatttttgtatttttagtagagatggggttttgccatgatggccaggctggtctcgaactcctgacctcaggtgatc s panTro5.chr1 222288958 496 + 228573443 TCTCTTCCTCAAGATTCCTTATCTCCTCCTGTTGAATCATTTTAAGATGCTCAAATTTGTCCTGCAGCTGTGAAACCAATGTGCAGTTGTGACACCAAAG--CAGTGTGGCTGAACACCCAAAAGAATATGCTTTTTT-CTGATTATCAAACAAACCCAAATCATCACAGTAGAGCACGATCTTAATAACAATCTCAAAAACTCAGGAGTAAACACTCAGATATGGAAtttttcttttctttcttttttccttttataagatggagtctcactctgttgcccaggctggagtgcactggtgcgatctcagctcactgcaacctccatctcccagttcaagtgattctcctgcctcagcctcttgagtagctgggactacaggcatgcaccaccactacaggcgtgtgccaccacacctggctaatttttgtatttttagtagagatggggttttgccatgttggccaggctggtctcgaactcctgacctcaggtgatc i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015413v1 1647733 495 + 3967317 TCTCTTCCTCGAGCTTCCTTATCTCCTCCTGTTGAATCATTTTAAGATGCTCGAACTTGTCCTGCAGCTGTGAAACCAATGTGCAGTTGTGACACCAAAG--CAGTGTGGCTGAACACCTAAAAGAATATGCTTTTTT-CTGATTATCAAACAAACCCAAATCATCACAGTAGAGCACGATCTTAATAACAATCTCAAAAACTCAGGAGTAAACACTCAGATATGGAAtttttcttttctttcttttttccttttataagatggagtctcactctgttgcccaggctggagtgcactggtgcgatctcagctcactgcaacctccatctcccagttcaagtgattctcctgcctcagcctcttgagtagctgggactataggcatgcaccaccactacaggcgtgtgccaccacacctggctaatttttgtatttttagtagagatgggg-tttgccatgttggccaggctggtctcgaactcctgacctcaggtgatc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr17 47252530 479 - 99891981 TCTCTTCATCGAGCTTCCTTATCTCCTCCTGTTGAATCATTTTAAGGTGCTCGAACTTGTCCTGCAGCTGTGAAACCAATGTGCAGTTGTGACACCAAAGCACAGTGTGGCTGAACACCCAAAAGAATATGCTTTTTT-CTAATTATCAAACAAACCCAAATCATCACAGTAGAGCATGATCTTAATAACAATCTCAAAAACTCAGGAGTAAACACTGAGATATGGAAtttttcttttctttcttttttccttttttgagatggagtctcactctgctgcccaggctggagtgcagtggcgcgatctcagctcactgcaacctccatctcctggtttgagtgattctcctgcctcagcctcttgagaagctgggattacaggcatgca-------------------ccaccacgcccagctaatttttgtatttttaataaagatggggtttcaccatgttggccaggctggtctttaactcctaacctcaggtgatc i nomLeu3.chr17 C 0 M 100 s macFas5.chr3 127819784 476 - 192294377 TCTCTTCCTCGAGCTTCCTTATCTCCTCCTGTTGAATCATTTTAAGATGCTCGAACTTGTCCTGCAGCTGTGAAACCAATGTGCAGTTGTGACACCAAAGCACAGTGTGGCCGAACAACCAGAAGAACATGCTTTTTT-CTG---ATCAAACAAACCCAAATCATCAGAGGAGAGCATGATCTTAATAACAATCTCAAAAACTCAGGAGTAAACACTTAAATATGGAAtttttcttttctttcttttttccttttttgagatggagtctcactctgttgcccaggctggagtacagtggcacaatcttggctcactgcaacctccatttcctggttccaatgattctcctgcctcagcctcgcgagaagctgggactacaggcacgca-------------------ccaccatgcctggctaatttttgtacttttagtagagacggggtttcaccatgttggccaggctggtcttgagctcctgaccgcaggtgatc i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124234162 476 - 127223203 CCTCTTCCTCGAGCTTCCTTATCTCCTCCTGTTGAATCATTTTAAGATGCGCGAACTTGTCCTGCAGCTGTGAAACCAATGTGCAGTTGTGACACCAAAGCACAGTGTGGCTGAACACCCAGAAGAACATGCTTTTTT-CTG---ATCAAACAAACCCAAATCATCAGAGGAGAGCATGATCTTAATAACAATCTCAAAAACTCAGAAGTAAACACTTAGATACGGAAtttttcttttctttcttttttccttttttgagatggagtctcactctgttgcccaggctggagtacagtggcacaatcttggctcaccgcaacctccatttcctggttccaatgattctcctgcctcagcctcccgagaagctgggactacaggcacgca-------------------ccaccatgcccggctaatttttgtacttttagtagagacggggtttcaccatgttggccaggctggtcttgagctcctgacctcaggtgatc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 136407 476 - 148006 TCTCTTCCTCGAGCTTCCTTATCTCCTCCTGTTGAATCATTTTAAGATGCTCGAACTTGTCCTGCAGCTGTGAAACCAATGTGCAGTTGTGACACCAAAGCACAGTGTGGCTGAACACCCAGAAGAACATGCTTTTTT-CTG---ATCAAACAAACCCAAATCATCAGAGGAGAGCATGATCTTAATAACAATCTCAAAAACTCAGGAGTAAACACTTAGATATGGAAtttttcttttctttcttttttccttttttgagatggagtctcactctgttgcccaggctggagtacagtggcacaatcttggctcactgcaacctccatttcctggttccaatgattctcctgcctcagcctcccgagaagctgggactacaggcacgca-------------------ccaccatgcccagctaatttttgtacttttagtagagacggggtttcaccatgttggccaggctggtcttgagctcctgacctcaggtgatc i manLeu1.NW_012100344v1 C 0 C 0 e macNem1.NW_012012500v1 40292 934 + 413781 M a score=378513.000000 s hg38.chr3_KI270784v1_alt 7796 293 + 184404 ctcccgctttggcctcccaaagACtttttt----------tttttttt----aatatagagacaagttctcagtacgttgcccaggatggtctcaaactcctgagctcaagtgatcctcccacctcagcttcccaaagtgctgggactgactggatgcagtggctcatgcttgtaaactcagcactttgggaggccaaggtgggaggatcgcttgagcccaggagttcaagaccagactgggtgatataacACAATAGTCAACTTCaacaggagagagaatctgtaaacttgaatatagatcttccg s panTro5.chr1 222289454 293 + 228573443 ctcccgctttggcctcccaaagACtttttt----------tttttttt----aatatagagacaagttctcagtatgttgcccaggctggtctcaaactcctgagctcaagtgatcctcccacgtcagcttcccaaagtgctgggactgactggatgcagtggctcacgcttgtaaactcagcactttgggaggccaaggtgggaggatcgcttgagcccaggagttcaagaccagactgggtgatataacAcaatagtaaacttcaacaggagagagaatctgtaaacttgaatatagatcttctg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015413v1 1648228 293 + 3967317 ctcccgctttggcctcccaaagACtttttt----------tttttttt----aatatagagacaagttctcagtatgttgcccaggctggtctcaaactcctgagctcaagtgatcctcccacctcagcttcccaaagtgctgggactgactggatgcagtggctcatgcttgtaaactcagcactttgggaggccaaggtgggaggatcgcttgagcccaggagttcaagaccagactaggtgatataacacaatagtaaacttcaacaggagagagaatctgtaaacttgaatatagatcttctg i gorGor5.CYUI01015413v1 C 0 C 0 s macFas5.chr3 127820260 303 - 192294377 ctcctgctttggcctcccaaaTACTTTCTTTCTttctttcttttcttt----aatatagagacaaggtctcactatgttgcccaggctgttctcaaactcctgagctcaagtgatcctcccacctcagcttcccaaagtgctgggactgactgaatgcagtggcttatgcttgtaatctcagcactttgggaggccaaggcagaaggatcgcttgagcccaggagttcaagaccagactgggcaatataacAcaatagtaaacttcaacaggaaagagcatctgtaaaattgaatatagatcttctg i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124234638 303 - 127223203 ctcctgctttggcctcccaaaTACTTTCtttctttctgtctttttttt----aatatagagacaaggtctcactatgttgcccaggctggtctcaaactcctgagctcaagtgatcctcccacctcagcttcccaaagtgctgggaGTgactgaatgcagtggcttatgcttgtaatctcagcactttgggaggccaaggcagaaggatcgcttgagcccaggagttcaagaccagactgggcaatataacAcaatagtaaacttcaacaggaaagagcatctgtaaaattgaatatagatcttctg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 136883 307 - 148006 ctcctgctttggcctcccaaaTACTTTCTTTCTTTCtttctttctttttttaaatatagagacaaggtctcactatgttgcccaggctggtctcaaactcctgagctcaagtgatcctcccacctcagcttcccaaagtgctgggactgactgaatgcagtggcttatgcttgtaatctcagcactttgggaggccaaggcagaaggatcgcttgagcccaggagttccagaccagactgggcaatataacAcaatagtaaacttcaacaggaaagagcatctgtaaaattgaatatagatcttctg i manLeu1.NW_012100344v1 C 0 C 0 e macNem1.NW_012012500v1 40292 934 + 413781 M e nomLeu3.chr17 47253009 100 - 99891981 M a score=190711.000000 s hg38.chr3_KI270784v1_alt 8089 116 + 184404 aaattatccagtcagaggacagagaaaaaaagaataaaagagagaaaagaaggctgggtgtggtggctcaagcctgtaatcccaacactttgggaggccgaggcaggcagattaag s panTro5.chr1 222289747 116 + 228573443 aaattatccagtcagaggacaaagaaaaaaagaataaaaaagagaaaagaaggctgggcgtggtggctcaagcctgtaatcccaacactttgggaggccgaggcaggcagattaag i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015413v1 1648521 116 + 3967317 aaattatccagtcagaggacaaagaaaaaaagaataaaaaagagaaaagaaggctgggcgtggtggctcaagcctgtaatcccaacactttgggaggctgaggcaggcagattaag i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr17 47253109 106 - 99891981 aaattatccagtgagaggacaaagaaaaaa----------agagaaaagacggccaggcgtagtggctcacacctgtaatcccagcactttgggaggctgaggcaggcagatcaca i nomLeu3.chr17 M 100 C 0 s macFas5.chr3 127820563 116 - 192294377 aaattatccagccagaggacaaagaataaaataataaaaaagagaaaagaagaccaggcgtggtggctcacgcctgtaatcccagcactttggtaggccaaggcaggcagatcaca i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124234941 116 - 127223203 aaattatccagtcagaggacaaagaataaaataataaaaaagagaaaagaagaccgggcgtggtggctcacgcctgtaatcccagcactttggtaggccaaggcaggcagatcaca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 137190 116 - 148006 aaattatccagtcagaggacaaagaataaaataataaaaaagagaaaagaagactgggcgtggtggctcatgcctgtaatcccagcactttggtaggccaaggcaggcagatcaca i manLeu1.NW_012100344v1 C 0 C 0 e macNem1.NW_012012500v1 40292 934 + 413781 M a score=29540.000000 s hg38.chr3_KI270784v1_alt 8205 11 + 184404 aggtcaggagt s panTro5.chr1 222289863 11 + 228573443 aggtcaggagt i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015413v1 1648637 11 + 3967317 aggtcaggagt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr17 47253215 11 - 99891981 aggtcaggagt i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127820679 11 - 192294377 aggtcaggagt i macFas5.chr3 C 0 C 0 s macNem1.NW_012012500v1 41226 11 + 413781 aggtcaggagt i macNem1.NW_012012500v1 M 934 C 0 s chlSab2.chr21 124235057 11 - 127223203 aggtcaggagt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 137306 11 - 148006 aggtcaggagt i manLeu1.NW_012100344v1 C 0 I 218 a score=352546.000000 s hg38.chr3_KI270784v1_alt 8216 153 + 184404 tcaagaccagcctgtccaacatgacaaagccccatctctactaaaaatacaaaaattagccgggtgtggtggcacacacctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttggagtgcaat s panTro5.chr1 222289874 153 + 228573443 tcaagaccagcctggccaacatgacaaaaccccatctctactaaaaatacaaaaattagccgggtgtggtggcacacacctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttggagtgcaat i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015413v1 1648648 153 + 3967317 tcaagaccagcctggccaacatgacaaaaccccatctctactaaaaatacaaaaattagccgggtgtggtggcacacacctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttggagtgcaat i gorGor5.CYUI01015413v1 C 0 N 0 s nomLeu3.chr17 47253226 149 - 99891981 tcaagaccagcctggccaacatagtggaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggcacacgcctgtagtccaagctatttgggaggctgaggcaggagaatcacttgaacccaggaggcagaggttgcagtg---- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127820690 146 - 192294377 tcaagaccagcctggccaacatagtgaaaccccatctctactaaaaatacaaaaagtagctgggtgtggtggcacacacctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaacccaggaggcagaggttgca------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012012500v1 41237 146 + 413781 tcaagaccagcctggccaacatagtgaaaccccatctctactaaaaatacaaaaagtagctgggtgtggtggcacacacctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaacccaggaggcagaggttgca------- i macNem1.NW_012012500v1 C 0 C 0 s chlSab2.chr21 124235068 146 - 127223203 tcaagaccagcctggccaacatagtgaaaccccatctctactaaaaatacaaaaagtagctgggtgtggtggcacacacctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaacccaggaggcagaggttgca------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 137535 146 - 148006 tcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggcatgcacctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaacccaggaggcagaggttgca------- i manLeu1.NW_012100344v1 I 218 C 0 a score=95708.000000 s hg38.chr3_KI270784v1_alt 8369 62 + 184404 gtgagccgagaccaca-cattacactccagcctgggtgacagagcatgactctgtctcaaaaa s panTro5.chr1 222290027 62 + 228573443 gtgagccgagaccaca-cattgcactccagcctgggtgacaaagcaggactctgtctcaaaaa i panTro5.chr1 C 0 C 0 s nomLeu3.chr17 47253375 60 - 99891981 ---agctgagaccatgccattgcactctagcctgggcaacagagagagactccatctcaaaaa i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127820836 63 - 192294377 gtgagccaagactataccaatacactccagcctgggcagcagagagagactccatctcaaaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012012500v1 41383 63 + 413781 gtgagccaagactataccaatacactccagcctgggcagcagagagagactccatctcaaaaa i macNem1.NW_012012500v1 C 0 I 20 s chlSab2.chr21 124235214 63 - 127223203 gtgagccaagactataccaatacactccagcctgggcagcagagagagactccatctcaaaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 137681 63 - 148006 gtgagccaagactataccaatacactccagcctgggcagcagagagagactccatctcaaaaa i manLeu1.NW_012100344v1 C 0 C 0 a score=7162.000000 s hg38.chr3_KI270784v1_alt 8431 10 + 184404 gaaaaaaaaa s panTro5.chr1 222290089 10 + 228573443 aaaaaaaaaa i panTro5.chr1 C 0 I 9 s nomLeu3.chr17 47253435 10 - 99891981 aagaaaaaaa i nomLeu3.chr17 C 0 I 1 s macFas5.chr3 127820899 9 - 192294377 -agagacaga i macFas5.chr3 C 0 I 5 s chlSab2.chr21 124235277 9 - 127223203 -agagacaga i chlSab2.chr21 C 0 I 3 s manLeu1.NW_012100344v1 137744 9 - 148006 -agagacaga i manLeu1.NW_012100344v1 C 0 I 3 e macNem1.NW_012012500v1 41446 20 + 413781 I a score=1085702.000000 s hg38.chr3_KI270784v1_alt 8441 603 + 184404 agagacagagaaaagaaagccaacaagacaccattaagcaaaccattgtcaggttatgggagtttgagaaggaaagtagagaaaggagaataaagcttattt----aaagaatggctgacaactgcctaaatcatgggaaagatttagacatctaaatccatgaagcttaaagattcctaaagaggttcaaaccaaatagatactcaccaagtcacaatataatcaaatagtcaaaagtta------------------------------------------------------------------------------------------------------------------------aagaaactttgcaggtcaggacagaatcgaataatacattcaaagtgctgaaagaaaaaaactgccagcaactaatactatgtctgacaaagctgtccttcagaaaggaaaaagaaataatgtgtttcctcgacaaacaaagctgagggcattcaggaccactaggtctaccttaaaaaaa-tgcttaacggagtttttcaagtaaaaat----gaaTGAAGTTgggagcggtggctcatgcctgtaatcc---cattttgggaggctgaggtgggtggatcacctgaggtcgggaggtcaagaccagcctggccaacatggcaaaaccccacctccagtaaaaatacaaaaaattagccaggtatgaagg---cca s panTro5.chr1 222290108 604 + 228573443 agagacagagaaaagaaagccaacaagacaccattaggcaaaccattgtcaggttatgggagtttgagaaggaaagtagagaaaggagaagaaagcttattt----aaggaatggctgaaaactgcctaaatcatgggaaagatttagacatctaaatccatgaagcttaaagattcctaaagaggttcaaaccaaatagatactcaccaagtcacaatataatcaaatagtcaaaagtta------------------------------------------------------------------------------------------------------------------------aagaaactttgcaggtcaggacagaatcgaataatacattcaaagtgctgaaagaaaaaaactgccagcaactaatactatgtctgacaaagctgtccttcagaaagaaagaagaaataacgtgtttcctcgacaaacaaagctgagggcattcaggaccagtagatctaccttaaaaaaaatgcttaagggagtttttcaagtaaaaat----gaaTGAAGTTgggagctgtggctcatgcctgtaatcc---cattttgggaggccgaggtgggtggatcacctgaggtcgggaggtcaagaccagcctggccaacatggcaaaaccccacctccagtaaaaatacaaaaaattagccaggtatgaagg---cca i panTro5.chr1 I 9 C 0 s nomLeu3.chr17 47253446 702 - 99891981 agagggagagaaaagaaagccaatgagacaccattaggcaaaccactgtcaggttatgggagtttgagaaggaaagtagagaaaggagaagaaagcttatttaaagaaagaatggctgtaaactgtctaaatcatgggaaagatttagacatccaaatccatgaagcttaaagattcctaaagaggttcaaaccaaatagatactcaccaagtcacaatataatcaaatagtcaaaagtcaaagattttttaaaatgttgaagaggcaagag--------------------------------aaaagtggcatgacatagacaagagaatcttcattagactgtcagcagatttctcagaagaaactttgcaagtcaggagagaatcaaaaaatacattcaaagtgctgaaag-aaaaaactgccagcaactaatactatgtctgacaaagctatccttcagaaagaaagaagaaataacatgtttcctcgacaaacaaagctgagggaattcaggaccactaggtctaccttaaaagaaatgcttaagggagtttttcaagtaaaaatgaaagaatgCAgctgggcatagtggctcatgcctgtaatcccggcattttgggaggccga---gggtggatcacctgaggtcaggaggtcaagaccagcctggccaacatggcaaaaccccatctctaccaaaaatacaaaaaattatccaggtgtggcggtgccca i nomLeu3.chr17 I 1 N 0 s macFas5.chr3 127820913 699 - 192294377 agagagagagaaaagaaagccaatgagacacgattaggcaaaccactgtcaggttatgggagtttgacaaagaaagtagagaaaggaaaagaaagcttatttaaagaaagaatggctaaaaactgcctaaatcatgggaaagatttagacaaccaaatacatgaagcctaaagattcctaaagaggttcaaaccaaatagatactcacaaagtcacaatataatcaaatagtcaaaagtcaaagattttttaaaatgttgaagaggcaagag--------------------------------aaaagtggcatgacacagacaagagaatcttcattagactatcagcagatttctcacaagaaactttgcaggtcaagagagaatcaaataatacattcaaagtgctgaaagaaaaaaactgccagcaactaatactatgtctgacaaagctatccttcagaaagaaagaagaaataacatgttccctagacaaacaaagctgagggaattcaggaccactaggtctaccttaaaaaaa-tgcttaagggagtttttcaagtaaaaatcaaagaatgaAGTTGTAcgcagtggttcatgcctgtaatcc---cattttgggaggccgaggtgggtggatcacctgaggtcaggaggtcaagaccagcctggccaacatggcaaaaccccatcactactaaaaatacaaaaaattagccaggtgtggtgg---cgG i macFas5.chr3 I 5 N 0 s macNem1.NW_012012500v1 41466 702 + 413781 agagagagagaAAAGAAAGCCAatgagacacgattaggcaaaccactgtcaggttatgggagtttgacaaagaaagtagagaaaggaaaagaaagcttatttaaagaaagaatggctaaaaactgcctacatcatgggaaagatttagacaaccaaatacatgaagcctaaagattcctaaagaggttcaaaccaaatagatactcacaaagtcacaatataatcaaatagtcaaaagtcaaagattttttaaaatgttgaagaggcaagag--------------------------------aaaggtggcgtgacatagacaagagaatcttcattagactatcagcagatttctcacaagaaactttgcaggtcaagaaagaatcaaataatacattcaaagtgctgaaagaaaaaaactgccagcaactaatactatgtctgacaaagctatccttctgaaagaaagaagaaataacatgttccctagacaaacaaagctgagggaattcaggaccactaggtctaccttaaaaaaa-tgcttaagggagtttttcaagtaaaaacgaaagaatgaAGTTgggcgcggtggctcatgccaataatcccagcattttgggaggccaaggtgggtggattgcctgaggtcaggaggtcaagaccagcctggccaacatggcaaaaccccatcactactaaaaatacaaaaaattagccaggtgtggtgg---cgG i macNem1.NW_012012500v1 I 20 I 3 s chlSab2.chr21 124235289 699 - 127223203 agagagagaaaaaagaaagccaatgagacaccattaggcaaaccactgtcaggttatgggagtttgacaaagaaagtagagaaaggagaagaaagcttatttaaagaaagaatggctaaaaactgcctaaatcatgggaaagatttagacaaccaaatacatgaagcctaaagattcctaaagaggttcaaaccaaatagatactcacaaagtcacaatataatcaaatagtcaaaagtcaaagattttttaaaatgttgaagaggcgagagaaaagtggcatgacatacacaagagaatcttc--------------------------------attagactatcagcagatttctcagaagaaactttgcaggtcaagagagaatcaaataatacattcaaagtgctgaaagaaaaaaactgccaacaactaatactatgtctgacaaagctatccttccgaaagaaagaagaaataacatgtttcctcgacaaataaagctgagggaatgcaggaccactaggtctaccttaaaaaaa-tgcttaagggagtttttcaagtaaaaatcaaagaatgaAGTTGTAcgcagtggttcctgcctgtaatcc---cattttgggaggccgaggtgggtggatcacctgaggtcaggaggtcaagaccagcctggccaacatggtaaaaccccatcactactaaaaatacaaaaaattagccaggtgtggtgg---cgG i chlSab2.chr21 I 3 I 3 s manLeu1.NW_012100344v1 137756 699 - 148006 agagagagaaaaaAGAAAGCCAatgagacaccattaggcaaaccactgtcaggttatgggagtttgacaaagaaagtagagaaaggaaaagaaagcttatttaaagaaagaatggctaaaaactgcctaaatcatgggaaagatttagacaaccaaatacgtgaagcctaaagattcctaaagaggttcaaaccaaatagatactcacaaagtcacaatataatcaagtagtcaaaagtcaaagattttttaaaatgttgaagaggcaagag--------------------------------aaaagtggcatgacatagacaagagaatcttcattagactatcagcagatttctcagaagaaactttgcaggtcaagagagaatcaaataatacattcaaagtgctgaaagaaaaaaactgccagcaactaatactatgtctgacaaagctatccttcagaaagaaagaagaaataacatgtttcctcgacaaacaaagctgagggaattcaggaccactaggtctacctttaaaaaa-tgcttaagggactttttcaagtaaaaatcagagaatgaAGTTGTAcgcagtggttcatgcctgtaatcc---cattttgggaggccgaggtgggtggatcacctgaggtcaggaggtcaagaccagcctggccaacatggcaaaaccccatcactactaaaaatacaaaaaattagccaggtgtggtgg---cgG i manLeu1.NW_012100344v1 I 3 I 3 a score=78822.000000 s hg38.chr3_KI270784v1_alt 9044 78 + 184404 ctgagatcgtgccactgcactccagcctgggtgacaagagtcaaactacatttcaaaa----acaaaaaacaaaacaaACAA s panTro5.chr1 222290712 78 + 228573443 ctgagatcgtgctactgcactccagcctgggtgacaagagtcaaactacatttcaaaa----acaaaaaacaaaacaaACAA i panTro5.chr1 C 0 C 0 s nomLeu3.chr17 46741937 49 - 99891981 ctgagatcgcaccactgcactccagcct-----------gccaaactgcatctcaaaa----aa------------------ i nomLeu3.chr17 N 0 C 0 s macFas5.chr3 127668056 55 - 192294377 ctgagatcgcaccactgcactccagcc-----------ggccaaactgcatctcaaaa----aaaaaaaa------------ i macFas5.chr3 N 0 C 0 s macNem1.NW_012012500v1 42171 66 + 413781 ctgagattgtgccactgtactccagactgggtgacaggagccaaactgcatctcaaaa----aaaaaaaa------------ i macNem1.NW_012012500v1 I 3 C 0 s chlSab2.chr21 124235991 70 - 127223203 ctgagattgtgccactgcactccagcctgggtgacaggagccaaactgcatctcaaaaaaagaaaaaaaa------------ i chlSab2.chr21 I 3 C 0 s manLeu1.NW_012100344v1 138458 64 - 148006 ctgagattgtgccactgcactccagcctgggtgacaggagccaaactgcatctcaa------aaaaaaaa------------ i manLeu1.NW_012100344v1 I 3 C 0 a score=123111.000000 s hg38.chr3_KI270784v1_alt 9122 73 + 184404 AAAAAA-CAAAACTTGAGGCCTGGCCTTCTGCTCCTCTCCAACCTCCCCTTCTCTGGGCCCAAGCCACCTT----------------GGC s panTro5.chr1 222290790 74 + 228573443 AAAAAAACAAAACTTGAGGCCTGGCCTTCTGCTCCTCTCCAACCTCTCCTTCTCTGGGCCCAAGCCACCTT----------------GGC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4203574 73 + 4392246 aaaaaa-caaaaCTTGAGGCCTGGTCTCGTGCTCCCCTCCCATCCCCCCTTCCGTGGGTCCAAGCTGCCTT----------------GGC i gorGor5.CYUI01015383v1 N 0 C 0 s nomLeu3.chr17 46741986 73 - 99891981 aaaaaa-caaaaCTTGAGGCCTGGCCTCCTGCTCCCCTCCCATCCCCCCTTCTGTGGGTCCAAGGTGCCTT----------------GGC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127668111 82 - 192294377 --------aaaaCTTAAGGCCTGGCCTCCTGCTCCCCTCCCACCCTCCCTTCTGTAGGTCCAAGCTGTCTTAGGTTGGGGGGGCTGAGGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012012500v1 42237 70 + 413781 --aaaa-caaaaCTTGAGGCCTGGCCTGCTACTCTCCTCCCACCC-CCCTTCTCTGGGCCCAAGCCACCTT----------------GGC i macNem1.NW_012012500v1 C 0 C 0 s chlSab2.chr21 124236061 65 - 127223203 --------aaaaCTTGAGGCCTGGCCTCCTACTCTCCTCCCACCC-CCCTTCTCTGGGCCCAAGCCACCTT----------------GGC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 138522 65 - 148006 --------aaaaCTTGAGGCATGGCCTCCTACTCTCCTCCCACTC-CCCTTCTCTGGGCCCAAGCCATCTT----------------GGC i manLeu1.NW_012100344v1 C 0 C 0 a score=4857806.000000 s hg38.chr3_KI270784v1_alt 9195 1708 + 184404 TGAGGAGGGGGC-GAGGAGGTGTGAGCCCCTGCCAGGAACCCCCTGCCCGGACCAAGTGCTCGGCCCCCAGGC---------CTGCGTTCAGTGAGGCCTCCCGTGGCGTCAGCATGTTCGTGTGGAGGAATGTGGAAGGTCACTCTGCGGCCGTGTTCTCCTGGTACTCCATCCCCTTCCTGACC-CCTCCCTGCAGCCACACGAGGCCCAGCAACCTGCCAGTCACTCAGTGGCCTCCAACCAGAGAAAACAACCTGCCAAGTTGGCAGCCGTTGCTCATGAGCGTCCACCAGGTGGGACAGGGAGTGTTGACCCTGGGCAGCCCCCTGGAGCCACCTGCCCTGAAAGCCCAGGGCCCGCAACCCCACACACTTTGGGGGTGGTGGAACCTGGTAAAAGCTCACCTCCCACCATGGAGGAGGAGCCCTGGGCCCCTCAGGGGAGTCCCTGCTGGACAGTGAGACAGAGAATGACCATGATGATGCTTTCCTCTCCATCATGTCTCCTGACACCCAGTTGCCTCTACCACTCAGATGATGTCAGGCCCAGTCCCTCAGTGCCCTGCGCAAGGAACAGGACTCATCTTCTGAGAAGGATGGACGCAGCCCCAACAAATCAGACAAGGACCACATCCGGTGGCCCATGAGTGGCGCTCATGATCTTCAGCAGGCGGCACCAGGCCCTGGCGGGGCGCACCAGGGTCATCCCAACCAGGATAACCGGACCGTCAGCCAGATGCTGAGCGAGCGGTGGTACACCCTGGGGCCCAATGAGATGCAGAAAT---ACAACCTGGCCTTCCAGGTGAAGGTGGCCCACTTGCAACAAGGACCGAAAGAAGTCCAGCTCAGAGGCCAAGCCCACAAGCCAGGGGCTAGCAGGAGTGTAACAAGGGCTCGTGGGAGCGGAGCATATCAGAGACGGGCACTGCCACTGCCCCTGGGGTGTCCTCTGAACTCCTGTCAGTTGCAGCCCAAACACTCCAGAGCTCGGATACCAAGGAGCAGCTTCTGTGGGGCAGAACGGCTGCACACAGTCAGGGAACCTGGCTCAGCCTGG-CCCAAGCCTTCTCCCACAGCGGGGTACACAGCCTGGACGGCAGGGAAATAGACCGTCAGGCACTACGGGAACTGACACAGGTGGTGTCTGGCACTGCATCATACTCTGGCCCAAAGCCTTCTACTCAGCATGGAGCTCCAGGCCACTTTGCAGCCCCTGGTGAGGGA--------GGTGACCCGTGGGCAGCCCTGCTGCCGCCCACGTGAGCTGCTCATTCCCAGCACATGGCCAGCGAGGTCATAGCGAGTGACGAAGAGCACACGGTCATCCATGAGGAGGAGGGGGTGATGATGTCATTGCTGATGATGGCTTTAGCACCACCGACACCGATCTCAAGTTCAAGGAGTGGGTGACCGAC--TGAGAGTGGGGACAACTCTGGGGAGGAGCCAGAGGGCAACAAGGGCTTTGGTGGGAAGGTATTTGCACCTGTCATTCCTTCCTCCTTTA-CTCCTGCCGCCCCTTGCTGGATCCTGAGCCCCCAGGGTCCCCC-GATCCACCTGCAGCTTTTGGC--AGTCTATGGTCACACCCTGTCCTCCTCCTACACATACTCGGATGCTTCCTCCTCAACCTTGGCACCCACCTCCTTCTTACTGGGCCCAGGAGCCTTCAAAGCCCAGGAGTCTGGTCAACGCAGCAGAG-CGGGCCCCCTACGGCCCCAA-CCCCT s panTro5.chr1 222290864 1711 + 228573443 TGAGGAGGGGGC-GAGGAGGTGTGAGCCCCTGCCAGGAACCCCCTGCCCGGACCAAGTACTCGGCCCCCAGGC---------CTGCGTTCAGTGAGGCCTCCCGTGGCGTCAGCATGTTCGTGTGGAGGAATGTGGAAGTTCACCCTGTGGTCGTGTTCCCCTGGTACTCCATCCCCTTCCTGACCACCCCCCCGCAGCCACACAAGGCCCAGCAACCTGCCAGTCACTCAGTGGCCTCCAACCAGAGAAAACAACCTGCCAAGTTGGCAGCTGTTGCTCATGAGCGTCCACCAGGTGGGACAGGGAGTGTTGACCCTGGGCGGCCCCCTGGAGCCACCTGCCCTGAAAGCCCAGGGCCTGCAACCCCACACACTTTGGGGGTGGTGGAACCTGGTAAAAGCTCACCTCCCACCATGGAGGAGGAGCCCTGGGCCCCTCAGGGGAGTCCCTGCTGGACAGTGAGACAGAGAATGACCATGATGATGCTTTCCTCTCCATCATGTCTCCTGACACCCAGTTGCCTCTACCACTCAGATGATGTCAGGCCCAGTCCCTCAGTGCCCTGCGCAAGGAACAGGACTCATCTTCTGAGAAGGATGGACGCAGCCCCAACAAATGGGACAAGGACCACATCTGGTGGCCTATGAGTGGCGGTCATGATCTTCAGCAAGCAGCACCAGGCCCTGGCAGGGTGCACCAGGGTCACCCCAACCAGGATAACCGGACCATCAGCCAGATGCTGAGCGAGCGGTGGTACACCCTGGGGCCCAATGAGATGCAGAAAT---ACGACCTGGCCTTCCGGGTGAAGGTGGCCCACTTGCAACAAGGACCGAAAGAAACCCAGCTCAGAGGCCAAGCCCACAAGCCAGGGGCTAGCAGGAGTGTAACAAGGGCTCGTGGGAGCAGAGCATATCAGAGACGGGCACTGCCACTGCCCCTGGGGTGTCCTCTGAACTCCTGTCAGTTGCAGCCCAAACACTCCAGAGCTCAGATACCAAGGAGCAGCTTCTGTGGGGCAGAACGGCTGCACACAGTCAGGGAACCTGGCTCAGCCTGG-CCCAAGCCTTCTCCCACAGCGGGGTACACAGCCTGGACGGCAGGGAAATAGACCGTCAGGCACTATGGGAACTGACACAGGTGGTGTCTGGCACTGCATCATACTCTGGCCCAAAGCCTTCTACTCAGTATGGAGCTCCAGGCCACTTTGCAGCCCCTGGTGAGGGA--------GGTGACCAGTGGGCAGCCCCGCTGCTGCCCACCTGAGCTGCTCATTCCCAGCACATGGCCAGTGAGGACATAGCAAGTGACGAGGAGCACATGGTCATCCATGAGGAGGAGGAGGTGATGATGTCATTGCTGATGATGGCTTTAGCACCACTGACACCGATCTCAAGTTCAAGGAGTGGGTGACCAAC--TGAGAGTGGGGACAACTCTGGGGAGGAGCCAGAGGGCAACAAGGGCTTTGGTGGGAAGGTATTTGCACCTGTCATTCCTTCCTCCTTTA-CTCCTGCCGCCCCTTGCTGGATCCTGAGCCCCCAGGGTCCCCT-GATCCACCTGCAGCTTTTGGCAAAGTCTATGGTCCCACCCTGTCCTCCTCCTACACATACTCGGATGCTTCCTCCTCAACCTTGGCACCCACCTCCTTCTTACTGGGCCCAGGAGCCTTCAAAGCCCAGGAGTCTGGTCAAGGCAGCAGAG-CGGGCCCCCTACGGCCCCTA-CCCCT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4203647 1720 + 4392246 TGAGGAGGGGGCTGAGGAGGTGTGAGCCCCTGCCAGGAA-CCCCTGCCCAGACCATGTACTTGGCCCACAGGCCCCTGATGTCTGCGTCCAGCAAGGCCTCCGGTGGCGTCAGCATGTTTGTGTGGAAGAACGTGGAACCTTGCTCCGTGGCTCTGTTCTCCTGGTACTCTGTCCCCTTCCTGACC-CCTCCCTGCAGCCACATGAGGCCTAGCAACCTGCCAGTCACTCAGTGGCCTCCAACCAGAGCAAAGAACCTGCCAAGTCAGCAGCTGTTGCTCACGAGCGTCCACCAGGTGGGACAGGGAGTGCTGACCTTGGGCAG-CCCCTGGAGCCACCTGCCCTGAAAGCCCAGGGCCCAGAACCCCACACACTTTGGGGGTAGTGGAACCTGGTAAAAGCCCACCTCCCACCATGAAGGAGGAGCCCTGGGCCCCTCAGGGGAGTCCCTGCTGGACAGTGAGACAGAGAATGACCATGATGATGCTTTCCTCTCCGTTATGTCTCCTGACACCCAGTTGCCTCTACCACTCAGATGATGTCAGGCCCAGTCCCTCAGTGCCCTGCACAAGGAACAGGACTCATCTTCTGAGAAGGATGGATGCAGCCCCAACAAATGGGACAAGGATCACATCCGGTCGCCCATGAGTGGCGGTCATGATCTTCAGCAAGTGGCACCAGATCCTGGCAGGGCGCACCAGGGTCACCCCAACCAGGATAACCGGATCGTCAGCCAGATCCTGAGCGAGCGGTGGTACACCCTGGGGCCCAATGAGACACAGAAGTACCACAACCTGGCCTTCCAGGTGAAGGTGGCCCACTTGCAACAAGGACCGAAAGAAGTCCAGCTCAGAGGCCAAGCCCACAAGCCAGGGGCTAGCAGGAGTGT-ACAAGGGCTCATGGGAGCAGAGCATATCACAGATGGGCACTGCCACTGCCCCTGGGGCGTCCTCTGAACTCCTGTCAGTTGCAGCCCAGACACTCCAGAGCTCGGATACCAAGGAGCAGCTTCTGTGGGGCAGGATGTCTGCACACAGTCAGGGAACCTGGCTCAGCCTGG-CCCAAGCCTTCTCCCACAGGGGGGTACACAGCCTGGATGGCAGGGAACTAGACCATCAGGCACTACAGGAAGTGACACAGGTGGTGTCTGGCACTGCATCATACTCTGGCCCAAAGCCTTCTACTCAGTGTGGAGGTCCAGGCCACTTCGCAGCCCCTGGTGAGGGA--------GGTGACCAGTGGGCAGCCCTGCTGCTGCCCACCTGAGCTGCTCATTCCCAGCACATGGCAAGCGAGGTCATAGCGAGTGACGAGGAGCCCATGGTCATCCATGAGGAGGAGGGGGTGATGATGTCATTGCTGATGACGGCTTTAGCACCGCTGACACTGATCTCAAGTTCAAGGAGTGGGTGACCGAC--TGAGAGTGGGGACAGCTCTGGGGAGGAGCCAGAGGGCAACAAGGGCTTTGATGGGAAGGTATTTGCACCTGTCATTCCTTCTTCCTTTA-CTCCTGCCGCCCCTTGCTGGATCCTGAGCCCCCAGGGTCCCCC-GATTCACCTGCAGTTTTTGGCAAAGTCTATGATCCCACCCCGTCCTCCTCCTACACATACTGGGATGCTTCCTCCTCAACCTTGGCACTCACCACCTTCTTACTGGGCCCAGGAGCCTTCAAACCCCAGGAGTCTGGTCAGGGCAGCAGAG-CGGGCCCCCTACGGCCCCTA-CCCCT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46742059 1707 - 99891981 TGAGGAGGGGGCTGAGGAGGTGTGAGCCCCTGCCGGGAACCCCCTGCCCAGACCATGTACTTGGCCCACAGGCCCCTGATGCCTGCGTCCAGCGAGGCCTCCGGTGGCGTCAGCATGTTCATGTGGAGGAACATGGAACCTTGCTCTGTGGCTGTGTTCTCCTGGTACTCTGTCCCCTTCCTGACC-CCTCCCTGCAGCCGCGTGAGGCCCAGCAACCTGCCAGTCACTCAGTGGCCTCCAACCAGAGCAAAGAACCTGCCAAGTCAGCAGCTGTTGCTCACGAGTGTCCACCAGGTGGGACAGGGAGTGCTGACCCTCGGCGGCCCCCTGAAGCCACCTGCCCTGAAAGCCCAGGGCCCAGAACCCCACACACTTTGGGGGTGGTGGAACCTGGTAAGGGCCCATCTCCCACCACAGAGGAGCAGCCCTGGGCCCCTCAGGGGAGCCCCTGCTGGACAGCGAGACAGAGAATGACCACGATGATGCTTTCCTCTCCGTCATGTCTCCTGACACCCAGTTGCCTCTGCCACTCAGATGACGTCAGGCCCAGTCCTTCAGTGCCCTGCGCAAGGAACAGGACTCATCTTCTGAGAAGGATGGATGCAGCCCCAACAAATGGGACAAGGACCACATCCGGCGGCCTGTGAGTGGCAGTCATAATCTTCAGCAAGTGGCACCAGGCCTTGGCAGGGCGCACCAGGGTCACCCCAATCAGGATAACTGGACCGTCAGCCAGATCCTGAGCGAGCAGTGGTACACCCTGGGGCCCAATGAGATGCAGAAGTACCACTACATGGCCTTCCAGGTGAAGGTGGCCCACTTGCAACAAGGACCGAAAGAAGTCCAGCTCAGAGGCCAACCCCACAAGCCAGGGGCTAGCAGGAGGGC-ACAAGGGTTT-----------GCATGTCAGAGATGGGCACTGCCACTGCCCCTGGGGTGTCCTCTGAGCTCCTGTCAGTTGCAGCCCAGACACTCCAGAGCTCAGATACCAAGGAGCAGCTTCTGTGGGGCAGAATGGCTGCACACAGTCAGGGAACCTGGCTCAGCCTGG-CCCAAGCCTTCTCCTACAGTGGGGTACACAGCCTGGACAGCAGGGAAATGGACTGTCAGGCACTACAGGAACAGACACAGGTGGTGTCTGGCACTGCATCATACTCTGGCCCAAAGCCTTCTATTCA-TATGGAGCTCCAGGCCACTTTGCAGCCCCTGGTGAGGGA--------GGTGACCAGTGGGCAGCCCTGCTGCTGCCCACTTGAGCTGCTCATTCCCAGCACATGGCCAGTGAGGACATAGCGAGTGAT---GAGCACATGGTCATCCATGAGGAGGAGGGGGTGATGATGTCATTGCTGATGACGGCTTTAGCACCACTGACACTGATCTCAAGTTCAAGGAGTGGGTGACCAAC--T--GAGTGGGGACAGCTCTGGGGAGGACCCAGAAGGCAACAAGGGCTTTGGTGAGAAGGTATTTGCACCTGTCATTCCTTCTTCCTTTACCCCCTGCCGCCCCTTCCTGGATCCTGAGCCCCCAGGGTCCCCC-GATCCAACTGCAGTTTTTGGCAAGGTCTATGGTCCCACCCCATCCTCCTCCTCCACATACTTGGATGCTTCCTCCTCAACCTTGGCATCCACCTCCTTCTTACTGGGCCCAGGAGCCTTCAAGGCCCAGGAGTCTGGTCAGGGCAGCAGAG-CGGGCCCCCTACAGCCCCTACCCCCT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55076782 1711 + 185818997 TGAGGAGGGGGCTGAGGAGGTGTGAGAGCCTGCCAGGAACCCCCTGCCGGGACCAAGTACTCGGCCCACAGGCCCCTGATGCCTGCGTCTAGAGAGGCCTCCAGTGGCATCGGCATCTTCATGTGGAGGAACATGGAACTTTGTTCTGTGGCCGTGTTCCCCTGGCACTCTGTCCCCTTCCTGACC-CCTCCCTGTAGCCGCGTGAGGCCCAGCAACCTGCCAGTCACTCAGTGGCCTCCAACCAGACAAAAGAACCTGCCAAGTCAGCAGCGGTTGCTCATGAGCGGCCACCAGGTGGGACAGGGAGTGCTGACCCTGGGCGGCCCCCTGGAACCACCTGCCCTGAAAGCCCAGGGCTTGGACCCCCACACACTTTGGGGGTGGTTGAACCTGGTAAGAGCCCACCTCCCACCATGGAGGAGGAGTCCTGGGCCCCTCAGGGGAGCCCCTGCTGGACAGTGACACAGAGAACGACC---ATGATGCTTTCCTCTCTGTCTTGTCTCCTGACACCCAGTTGCCTCTAGCACCCAGAAGATGTCAGGCCCAGTCCCTCAGTGCTCTGCCT--------GGACTCATCTTCTGAGAAGGATGAATGTAGCCCCAACAAATGGGACAAAGACCACATCCAGCGGCCCGTAAGTGGCGGTCATGATC-TCAGCAAGCAGCACCAAGTCCTGGCGGGGCCCACCAGCATGGCCCCAACCAGGACAACCGGACCGTCAGCCAGATCCTGGGTGAGTGGTGGAACACCCTGGGGCCCAATGAGAAGGAGAAGTACCATGACCTGACCTCCCAGGTGAAGGTGGCCCACTTGCAACAAGGACTGAAAGAAGTCCAGCCTGGAGGCGAAGCCCACAAGCCAGGGGCTGGCAGGAGAGC-ACAAGGGCTCGTGGAAGCAGAGCATGTCAGAGAC-GGCACTGCCAATGCCCCTGGGGTGTTCTCTGAGCTCCTGTCAGTTGCAGCCCAGACACTCCAGAGCTGGGATAGCAAGGAGCAGCTTCTGTGGGGCAGAACAGCTGCCCACAGTCAGGGAATCTGGCTCAGCCTGG-CCTGAGCCTTCTCCCACAGTGGAGTACACAGCCTGGACAGCAAGGAAGTGGACCGTCAGGCACTACAGGAACTGAGGCAGGTGGTGTCTGGTGCTGCATCGTA-TCTGGCCCAAAGCCTTCTGCCTAGTATGGAGCTCCAGGCCACTTTGCAGTCCCTGGTGAAGGA--------GGTGACCAGTGGGCAGCCCTGCTGCTGCCCACTTGAGCTGTTTATTCCCAGCATGTGGCCAGTGAGGACATAGTGAGTGAGCAAGAGCACAGGGTCATCCATGAGGAGGAAGGGGTGATGATGTCATTGCTGATGATGGCTTCAGCACCACTGACACTGATGTCAAGTTCAAGGAGTGGGTGACCAAT--TGAGAGTGGGGGCAGCTCTGGGAAGGAGCCAGAGGGCAACAAGGGCTTTGGTGGGAAGGCATTTGCACCTGTCATCCCTTCCTCCTTTACCCCCTGCCGCCCCTTGCTGGATCCTGAGCCCCCAAGGCCCCCCTGATCCATCTGCGGTTTTTGGCAAAGGCTATGGTCCCGCCCCATCCTGCTCCTCCACATACTCGGATGCTTCCTCCTCAACCTCGGCAGCCACCTCCTTCTCACTGGGCCCAGGAGCCTTCAAGGCTCAGGAGTCTGGTCAGGGCAGCAGAGCAGGCCCCCCTAAGGCTACTA-CCCCC i rheMac8.chr3 N 0 I 1 s macFas5.chr3 127668193 1715 - 192294377 TGAGGAGGGGGCTGAGGAGGTGTGAGAGCCTGCCAGGAACCCCCTGCCGGGACCAAGTACTCGGCCCACAGGCCCCTGATGCCTGCGTCTAGCGAGGCCTCCAGTGGCATCGGCATCTTCATGTGGAGGAACATGGAACTTTGTTCTGTGGCCGTGTTCCCCTGGCACTCTGTCCCCTTCCTGACC-CCTCCCTGTAGCCGCGTGAGGCCCAGCAACCTGCCAGTCACTCAGTGGCCTCCAACCAGACAAAAGAACCTGCCAAGTCAGCAGCGGTTGCTCATGAGCGGCCACCAGGTGGGACAGGGAGTGCTGACCCTGGGCGGCCCCCTGGAACCACCTGCCCTGAAAGCCCAGGGCTTGGACCCCCACACACTTTGGGGGTGGTTGAACCTGGTAAGAGCCCACCTCCCACCATGGAGGAGGAGTCCTGGGCCCCTCAGGGGAGCCCCTGCTGGACAGTGACACAGAGAACGACCATGATGATGCCTTCCTCTCTGTCTTGTCTCCTGACACCCAGTTGCCTCTAGCACCCAGAAGATGTCAGACCCAGTCCCTCAGTGCCCTGCCT--------GGACTCATCTTCTGAGAAGGATGAATGTAGCCCCAACAAATGGGACAAAGACCACATCCAGCGGCCCGTAAGTGGCGGTCATGATCTTCAGCAAGCAGCACCAAGTCCTGGCGGGGCCCACCAGCATGGCCCCAACCAGGACAACCGGACCGTCAGCCAGATCCTGGGTGAGTGGTGGAACACCCTGGGGCCCAATGAGAAGGAGAAGTACCATGACCTGACCTCCCAGGTGAAGGTGGCCCACTTGCAACAAGGACTGAAAGAAGTCCAGCCTGGAGGCGAAGCCCACAAGCCAGGGGCTGGCAGGAGGGC-ACAAGGGCTCGTGGAAGCAGAGCATGTCAGAGAC-GGCACTGCCAATGCCCCTGGGGTGTTCTCTGAGCTCCTGTCAGTTGCAGCCCAGACACTCCAGAGCTGGGATAGCAAGGAGCAGCTTCTGTGGGGCAGAACAGCTGCACACAGTCAGGGAATCTGGCTCAGCCTGG-CCTGAGCCTTCTCCCACAGTGGAGTACACAGCCTGGACAGCAAGGAAGTGGACTGTCAGGCACTACAGGAACTGAGGCAGGTGGTGTCTGGTGCTGCATCGTA-TCTGGCCCAAAGCCTTCTGCCTAGTATGGAGCTCCAGGCCACTTTGCAGTCCCTGGTGAAGGA--------GGTGACCAGTGGGCAGCCCTGCTGCTGCCCACTTGAGCTGTTTATTCCCAGCATGTGGCCAGTGAGGACATAGTGAGTGAGCAAGAGCACAGGGTCATCCATGAGGAGGAAGGGGTGATGATGTCATTGCTGATGATGGCTTCAGCACCACTGACACTGATCTCAAGTTCAAGGAGTGGGTGACCAAT--TGAGAGTGGGGGCAGCTCTGGGAAGGAGCCAGAGGGCAACAAGGGCTTTGGTGGGAAGGCATTTGCACCTGTCATCCCTTCCTCCTTTACCCCCTGCCGCCCCTTGCTGGATCCTGAGCCCCCAAGGCCCCCCTGATCCATCTGCGGTTTTTGGCAAAGGCTATGGTCCCGCCCCATCCTGCTCCTCCACATACTCGGATGCTTCCTCCTCAACCTCGGCAGCCACCTCCTTCTCACTGGGCCCAGGAGCCTTCAAGGCTCAGGAGTCTGGTCAGGGCAGCAGAGCAGGCCCCCCTAAGGCTACTA-CCCCC i macFas5.chr3 C 0 I 1 s macNem1.NW_012012500v1 42307 1715 + 413781 TGAGGAGGGGGCTGAGGAGGTGTGAGCCCCTGCCAGGAACCCCCTGCCCAGACCATGCACTCAGCCCACAGGCCCCTGATGCTTGCATCCAGCGAGGCCTCCCGTGGCCTTGGCTCATTTGTGTAGAGGAACGTGGAACCTCACTCTGTGGCTGTGTTCCCCTGGCACTCTGTCCCTTTCCTGACC-CCTCCCTGCAGTCACATGAGGCCCAGCAACCTGCCAGCCACTCAGTGGCCTCCAACCAGACAAAAGAACCTGCCGAGTTGGCAGCTGTTGCTCATGAGTATCCACCAGGTGGGACAGAGAGTGCTGACCCTGGGCGGCCCCCTGGAACCACCTGTCCTGAAAGCCCAGGGTCCAGACCTCCACACACTTTGTGGGTGGTGGAACCTGGAAAGGGCCCACCTCCCACCACAGACGAGGAGCCCTGGGTCCCTCAGGGGAGCCCCTGCTAGACAGTGAGACAGAGACTGACCATGATGATGCTTTCCTCTCTGTCATGTCTTCTGACACCCAGTTGCCTCTAGCACCCAG-AGGTGTCAGGCCCAGTCCCTCAGTGCCCTGCCCGAGGAACAGGACTCA---TCTGAGAAGGATGGATGCAGCCCCAACAAATGGGACAAGGACCACATCCAGTGGCCCATAAGTGGCAGTCATGATCTTCAGCAAGTGGCACCAGGCCCTGGTGGGGCCCACCAGTGTCACCCCAACCAGGACAACTGGACCATCGGCCAGATCCTGGGTGAGTGGTGGAACACCCTGGGGCCCAATGAGATGCAGAAGTACCATGACCTGACCTCCCAGGTGAAGGTGGCCCACTTGCAACAAGGACCGAACGAAGTCCAGCTCAGAGGCCAAGCCCACAAGCCAGGGGCTAGCAGGAGGGT-ACAAGGGCTTGCAGGAGCGGAGCATGTCAGAGACGGGCATTGCCACTGCCCCTGGGGTGTCCTCTGG--------CAGTTGTATCCCAGACACTCCTGAGCTGGGATACCAAGGAGCAGCTTCTGTGGGGCAGAAGGGCTGCACA----CAGGGAACCTGGCTCAGCCGGGCCCCAAGCCTTCTCCCACAGTGGGGTACGCAGCCTGGACGGCGGGGAAGT-GACCATCAGGCACTACAGGAACTGATGCAGGTGGTGTCTGGCGCTGCATCGGACTCTGGCCCAAAGCCTTCTACCCAGTATGGAGCTCTAGGCCCCTTGGCAGCCCCTGGTGAGGGAGGTGCCTTGGTGGCCAGTGGGCAGCCCCGCTGCTGCCCACCTGAGCTTCTCATTCCCAGCATGTGGCCAGTGAGGACACAGCAAGTGATGAGGAGCACATGGTCATCCGTGAGGAGGAAGGGGTGATGATGTCATTGCTGACGATGGCTTCAGCACCACTGACATTGATCTCAAGTACAAGGAGCAGGTGACTGACAGTGAGAGTGCATACAGCTCTGGGGAGGACCCAGAGAGCAACAAGGGCTTTGGTGGGAAGGTGTTTGCACCTGTCATCTGTTCCTCCTTTATCCCCTGCCACCCCTTGCTGGACCCTGAGCCCCCAGGGTCCCCC-GATCCACCTGC-ATCCTTGGCAAAGGCTATGGTCCCACCCTGTCCTCCTCCTCCATGTACTCGGATGCTTCCTCCTCAA-CTCGGCAGCCACCTCCTTCTCACTGGGCCCAGGAACGTTCAAGGCCCAGGAGTATGGTCAGGGCAGCAGAA-AGGGCCCCCTACGGCCCTCA-CCCCT i macNem1.NW_012012500v1 C 0 I 14 s chlSab2.chr21 124236126 1714 - 127223203 TGAGGAGGGGGCTGAGGAGGTGTGAGCCCCTGCCAGGAACCCCCTGCCCAGACCATGCACTCAGCCCACAGGCCCCTGATGCTTGCATCCAGCGAGGCCTCCCGTGGCCTTGGCTCATTTGTGTAGAGGAACGTGGAACCTTGCTCTGTGGCTGTGTTCCCCTGGTACTGTGTCCCCTTCCTGACC-CCTCCCTGCAGTCACATGAGGCCCAGCAACCTGCCAGTCACTCAGTGGCCTCCGACCAGACAAAAGAACCTGCCGAGTTGGCAGCTGTTGCTCATGAGCATCCACCAGGTGGGACAGGGAGTGCTGACCCTGGGCGGCCCCCTGGAACCACCTGCCCTGAAAGCCCAGGGCTTGGACCCCCATACACTTTGTGGATGGTGGAACCTGGTAAGGGCCCACCTCCCACCACAGACGAGGAGCCCTGGGCCCCTCAGGGGAGCCCCTGCTAGACAGTGAGACAGAGACTGACCATGATGATGCTTTCCTCTCTGTCATGTCTTCTGACACCCAGTTGCCTCTACTACCCAG-AGGTGTCAGGCCCAGTCCCTCAGTGCCCTGCCCAAAGAACAGGACTCA---TCTGAGAAGGATGGATGCAGCCCCAACAAATGGGACAAGGACCACATCCAGTGGCCCATGAGTGGCAGTCATGATCTTCAGCAAGTGGCACCAGGCCCTGGTGGGGCCCACCAGTGTCACCCCAACCAGGACAACTGGACCATCAGCCAGATCCTGGGTGAGTGGTGGAACACCCTGGGGCCCAATGAGATGCAGAAGTACCATGACCTGACCTCCCAGGTGAAGGTGGCCCACTTGCAACAAGGACCGAACAAAGTCCAGCTCAGAGGCCAAGCCCACAAGCCAGGGGCTAGCAGGAGGGT-ACAAGGGCTTGCAGGAGCAGAGCATGTCAGAGATGGGCATTGCCACTGCCCCTGGGGTGTCCTCTGG--------CAGTTGTATCCCAGACATTCCTGAGCTGGGATACCAAGGAGCAGCTTCTATGGGGCAAAACGGCTGCACA----CAGGGAACCTGGCTCAGCTGGGCCCCAAGCCTTCTCCCACAGTGGGGTACGCAGCCTGGATGGCGGGGAAGT-GACCATCAGGCACTACAGGAACTGATGCAAGTGGTGTCTGGTGCTGCATCGGACTCTGGCCCAAAGCCTTCTACCCAGTATGGAGCTCCAGGCCCCTTGGCAGCCCCTGGTGAGGGAGGTGCCTTGGTGGCCAGTGGGCAGCCCCGCTGCTGCCCACCTGAGCTTCTCATTCCCAGCATGTGGCCAGTGAGGACACAGCAAGTGACGAGGAGCACATGGTCATCTGTGAGGAGGAAGGGGTGATGATGTCATTGCTGACGATGGCTTCAGCACCACTGACATTGATCTCAAGTACAAGGAGCAGGTGACTGACAGTGAGAGTGCATACAGCTCTGGGGAGGACCAAGAGAGCAACAAGGGCTTTGGTGGGAAGGTGTTTGCACCTGTCATCTGTTCCTCCTTTATCCCCTGCCACCCCTTGCTGGACCCTGAGCCCCCAGGGTCCCCC-GATCCACCTGC-ATCCTTGGCAAAGGCTATGGTCCCACCCTGTCCTCCTCCTCCATGTACTCGGATGCTTCCTCCTCAA-CTCGGCAGCCACCTCCTTCTCACTGGGCCCAGGAACGTTCAAGGCCCAGGAGTATGGTCAGGGCAGCAGAA-AGGG-CCCCTACGGCCCTCA-CCCCT i chlSab2.chr21 C 0 I 12 s manLeu1.NW_012100344v1 138587 1714 - 148006 TGAGGAGGGGGCTGAGGAGGTGTGAGCCCCTGCCAGGAACCCCCTGCCCAGACCATGCACTCAGCCCACAGGCCCCTGATGCCTGCGTCCAGCGAGGCCTCCCGTGGCCTTGGCTCATTTGTGTAGAGGAACGTGGAACCTCGCTGTGTGGCTGTGTTCCCCTGGTACTCTGTCCCCTTCCTGACC-CCTCCCTGCAGTCACATGAGGCCCAGCAACCTGCCAGCCACTCAGTGGCCTCCAACCAGACAAAAGAACCTGCCGAGTTGGCAGCTGTTGCTTATGAGCATCCACCAGGTGGGACAGAGAGTGCTGACCCTGGGTGGCCCCCTGGAGCCACCTGCCCTGAAAACGCAGGGCTTGGACCCCCATACACTTTGTGGGTGGTAGAACCTGGTAA-GGCCCACCTCCCACCACAGACGAGGAGCCCTGGGCCCCTCAGGGGAGCCCCTGCTAGACAGTGAGACAGAGACTGACCATGATGATGCTTTCCTCTCTGTCATGTCTTCTGACACCCAGTTGCCTCTACCACCCAG-AGGTGTCAGGCCCAGTCCCTCAGTGCCCTGCCCAAGGAACAGGACTCA---TCTGAGAAGGATGGATGCAGCCCCAACAAATGGGACAAGGACCACATCCAGTGGCCCATGAGTGGCAGTCATGATCTTCAGCAAGTGGCACCAGGTCCTGGTGGGGCCCACCAGTGTCACCCCAACCAGGACAAATGGACCATCAGCCAGATCCTGGGTGAGTGGTGGAACACCCTGGGGCCCAATGAGATGCAGAAGTACCATGACCTGACCTCCCAGGTGAAGGTGGCCCACTTGCAACAAGGACCGAACAAAGTCCAGCTCAGAGGCCAAGCCCACAAGCCAGGGGCTAGCAGGAGGGT-ACAAGGGCTTGCAGGAGCGGAGCATTTCAGAGACGGGCATTGCCACTGCCCTTGGGGTGTCCTCTGG--------CAGTTGTATCCCAGACATTCCTGAGCTGGGATACCAAGGAGCAGCTTCTATGGGGCAGAACGGCTGCACA----CAGGGAACCTGGCTCAGCTAGGCCCCAAGCCTTCTCCCACAGTGGGGTACGCAGCCTGGACGGCGGGGAAGT-GACCATCAGGCACTACAGGAACTGATGCAGGTGGTGTCTGGCGCTGCATCGGACTCTGGCCCAAAGTCTTCTACCCAGTATGGAGCTCCAGGCCCCTTGGCAGCCCCTGGTGAGGGAGGTGCCTTGGTGGCCAGTGGGCAGCCCCGCTGCTGCCCACCTGAGCTTCTCATTCCCAGCATGTGGCCAGTGGGGACACAGCAAGTGATGAGGAGCACATGGTCATCCGTGAGGAGGAAGGGGTGATGATGTCATTGCTGACGATGGCTTCAGCACCACTGACATTGATCTCAAGTACAAGGAGCAGGTGACTGACAGTGAGAGTGCATACAGCTCTGGGGAGGACCCAGAGAGCAACAAGGGCTTTGGTGGGAAGGTGTTTGCACCTGTCATCTGTTCCTCCTTTATCCCCTGCCACCCCTTGCTGGACCCTGAGCCCCCAGGGTCCCCC-AATCCACCTGC-ATCCTTGGCAAAGGCTATGGTCCCACCCTGTCCTCCTCCTCCATGTACTCGGATGCTTCCTCCTCAA-CTTGGCAGCCACCTCCTTCTCACTGGGCCCAGGAACGTTCAAGGCCCAGGAGTATGGTCAGGGCAGCAGAA-AGGGCCCCCTACGGCCCTCA-CCCCT i manLeu1.NW_012100344v1 C 0 I 986 a score=437482.000000 s hg38.chr3_KI270784v1_alt 10903 365 + 184404 GGGGATGGGGGCCCAGGGACGCCTTCCAAGGTGGCCTGTTTCCTCCCAATGGATCCTGCCACCTTCTGGTGCAAGAGACCTGAAAGTGTGGGCGACCTGGAGCTACCAGGCTCCTCAGTCATCAGGGTCCCTCCCAATACTAAGGCTTTCCTAGGCAGGAGCTGGGCTGAGCCACCCGGGGGGCAGAGCCTGAA---GAGAAACTGACTGGGCTTTCGGGGTCGGGGCAGAGGGAACCCCACGGACATGGATCCCACACTGGAGGACCCCACCGCGCCCAAATGCAAGATGAGAAGATGCTCCAGCTGCAGTCCAAAGCCCAACACCCCCAAGTGTGCCACGTGTGATGGGGACAGCTTCCCCTTTGC s panTro5.chr1 222292575 365 + 228573443 GGGGATGGGGGCCCAGGGACGCCTTCCAAGGTGACCTGTTTCCTCCCAATGGATCCTGCCACCTTCTGGTGCAAGAGACCTGAAAATGTGGGCGACCTGGAGCTACCAGGCTCCTCAGTCATCAGGGTCCCTCCCAACACTAAGGCTTTCCTAGGCAGGAGCTGGGCTGAGCCACCCGGGGGGCAGAGCCTGAA---GAGAAACTGACTGGGCTTTCGGGGTCGGGGCAGAGGGAATCCCACGGACATGGATCCCACACTGGAGGACCCCACCACGCCCAAATGCAAGATGAGAAGATGCTCCAGCTGCAGTCCAAAGCCCAACACCCCCAAGTGTGCCATGTGTGATGGGGACAGCTTCCCCTTTGC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4205367 352 + 4392246 GGGGGTGGGGGCCCAGGGACGCCTTCCAAGGCGACCTGTTTCCTCCCAATGGATCCTGCCACCTTCTGGTGCAAGAGACCTGAAAGTGTGGGCGACCTGGAGCTACCAGGCCCCTCAGTCATCGCGGTCCCTCCCAACACTAAGGCTTTCCTAGGCAGGAGCTGGGCTGAGCCACCCGGGGGGCAGAGCCTGAAGAGGAGAAACTGACTGGGCTTTGGGGGTCGGGGCAGAGGGAACCCCACGGACATGGATCCCGCACTGGAGGACCCCACCATGCCCAAATGCAAGGTGAGAAGATGCTCCATCTTCAG----------------CCCAAGTGTGCCATGTGTGATGGGGAAAGCTTCCCCTTTGC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46743766 367 - 99891981 GGGGATGGGGGCCCAGGGACGCCTTCCAAGGCGACCTGATTCTTCCCAATGGATCCTGCCACCTTCTGGTGCAAGAGACCTGAAAGTGTGGGCGACCTGGAGCTACCAGGCCCCTCAGTCATCATGGCCCCTCCAAACACTAAGGCTTT-CTAGGCAGGAGCTGGGCTGAGCCACCTGGGGGGCAGAGTCTGAAGAGGAGAAACTGACTGGGTTTTGGGGGTCAGGACAGAGGGAACCCCATGGACATGGATCCTGCACTGGAGGACCCCATCGTGCCCAAATGCAAGATGAGAAGATGCTCCAGCTGCAGCCCGAAGCCCAACACCCCCAAGTGTGCCATGTGCGATGGGGACAGCTTCCCCTTTGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55078494 368 + 185818997 GGGGCTGGGGGCCCAGCGACACCTTCCAAGGCAACCTGGTTCCTCCGAACGGATCCTGCCACCTTCTGGCGCAAGAGACCTGAAAGTGTGGGCGACCTGGAGCCAGGAGGCCCCTCAGTCATAGTGGCCCCTCCCGACAGTAAGGCTTTCCTAGGCAGCAGCTGGTCTGAGCCACCTGGGGGGCTGGGCCTGCAGAGGAGAAACTGACTGGGCTTTGGCGGGCGGGGCAGAGGGAACCCTACGGACATGGAACCCGCACCCGAGGACCCCACCAGTCCCAAATGCAAGATGAGAAGATGCTCCAGCTGCAGCCTGGAGCCCAACACTCCCAAGTGTGCCATGTGCGAGGGGGACAGCTTCCCCTTTGC i rheMac8.chr3 I 1 C 0 s macFas5.chr3 127669909 368 - 192294377 GGGGCTGGGGGCCCAGCGACACCTTCCAAGGCAACCTGGTTCCTCCGAACGGATCCTGCCACCTTCTGGCGCAAGAGACCTGAAAGTGTGGGCCACCTGGAGCCAGGAGGCCCCTCAGTCATAGTGGCCCCTCCCGACAGTAAGGCTTTCCTAGGCAGCAGCTGGTCTGAGCCACCTGGGGGGCTGGGCCTGCAGAGGAGAAACTGACTGGGCTTTGGCGGGCAGGGCAGAGGGAACCCTACGGACATGGAACCCGCACCCGAGGACCCCACCAGTCCCAAATGCAAGATGAGAAGATGCTCCAGCTGCAGCCTGGAGCCCAACACTCCCAAGTGTGCCATGTGCGAGGGGGACAGCTTCCCCTTTGC i macFas5.chr3 I 1 C 0 e manLeu1.NW_012100344v1 140301 986 - 148006 I e chlSab2.chr21 124237840 12 - 127223203 I e macNem1.NW_012012500v1 44022 14 + 413781 I a score=4011.000000 s hg38.chr3_KI270784v1_alt 11268 2 + 184404 CT s panTro5.chr1 222292940 2 + 228573443 CT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4205719 2 + 4392246 CT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46744133 2 - 99891981 CT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55078862 2 + 185818997 CT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127670277 2 - 192294377 CT i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124237852 2 - 127223203 CT i chlSab2.chr21 I 12 C 0 e manLeu1.NW_012100344v1 140301 986 - 148006 I e macNem1.NW_012012500v1 44022 14 + 413781 I a score=541167.000000 s hg38.chr3_KI270784v1_alt 11270 194 + 184404 GTACAGGTGGAGAAGCCGAGGACAGGCTCAGGGAACCGGAGACCGAGAAGGCGCTGTCCTCTTCACTGCACGTACCCTGGACCAGTGCCGGCCCTGATCATGCAGCTCTTCCAGGCCCACTGCTTCTTCCTGTCCACTAGGCCACAGCCGCCCTCCAGGCCCACTATGCACACATCTTCCCCTCCAAGGTTTGT s panTro5.chr1 222292942 194 + 228573443 GTACAGGTGGAGAAGCCGAGGACAGGCTCAGGGAACCGGAGACCGAGAAGGCGCTGTCCTCTTCACTGCACGTGCCCTGGACCAGTGCCGGCCCTGATCATGCAGCTCTTCCAGGCCCACTGCTTCTTCCTGTCCACTAGGCCACAGCCGCCCTCCAGGCCCACTATGCACACATCTTCCCCTCCAAGGTTTGT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4205721 194 + 4392246 GTACAGGTGGAGAAGCCGAGGACGGGCTCAGGGAACTGGAGACCAAGAAGGCGCTGTCCTCTTCACTGCACGCGCCCTGGACCAGTGCCGGCCCTGATCATGCAGCTCTTCCAGGCCCACTGCTTCTTCCCGTCCACTAGGCCACAGCCGCCCTCCAGGCCCACTATGCACACATCTTCCCCTCCAAGGTTTGT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46744135 193 - 99891981 GTACAGGTAGAGAAGCCGAGGACAGGCTCAGGGAACCAGAGACCGAGAAGGCGCTGTCCTGTTCACTGCATGCGCCCTGGACCAGTGCCAGCCCTGATCATGCAGCTCTTCCAGGCCCACTGCTTCTTCCCGTCC-CCAGGCCACAGCCGCCCTCCAGGCCCACTATGCACACATCTTCCCCTCCAAGGTTTGT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55078864 194 + 185818997 GTACAGGTAGATAAGCCAAGGACGGGCTCAGGGAACCGAAGCTGGAGAAGGCGCTGTCCTCCTCACTGCGCGAGTCCTGGACCAGTGTTGGCCCTGGTCATGCAGGTCTTCCAGGCCCACGGCTTCTTCCAGTTCCCCCAGACACAGCCGCCCTCCAGGCCCGCTATGCACACATCTTCCCCTCCAAGGTTTGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127670279 194 - 192294377 GTACAGGTAGATAAGCCAAGGACGGGCTCAGGGAACCGAAGTTGGAGAAGGCGCTGTCCTCCTCACTGCGGGAGTCCTGGACCAGTGTTGGCCCTGGTCATGCAGGTCTTCCAGGCCCACGGCTTCTTCCAGTTCCCCTAGACACAGCCGCCCTCCAGGCCCGCTATGCACACATCTTCCCCTCCAAGGTTTGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012012500v1 44036 192 + 413781 GTACAGGTAGAGAAACCGAGGACTGGCTCAGGGAGCCGGAGTCTGAGAAGGTGCGGTCCTCCTCACTGCGGGCG--CTGGACCAGTGCGGGCCCTGGTCATGCAGCTCTTCCAGGACCACGGCTTCATCCCGTTCCCCAGGGCACAGCCTCCCTCCAGGCCTGCTATGTACCTATCTTCCCCTCCAAGGTTTGT i macNem1.NW_012012500v1 I 14 I 234 s chlSab2.chr21 124237854 192 - 127223203 GTACAGGTAGAGAAACCAAGGACTGGCTCAGGGAGCCGGAGTCTGAGAAGGTGTGGTCCTCCTCACTGCGGGCG--CTGGACCAGTGCGGGCCCTGGTCATGCAGCTCTTCCAGGACCACAGCTTCTTCCCGTCCCCCAGGCCACAGCCACCCTCCAGGCCTGCTATGCATACATCTTCCCCTCCAAGGTTTGT i chlSab2.chr21 C 0 I 234 s manLeu1.NW_012100344v1 141287 192 - 148006 GTACAGGTAGAGAAACCAAGGACTGGCTCAGGGAGCCGGAGTCTGAGAAGGTGCGGTCCTCCTCACTGCGGGCG--CTGGACCAGTGCGGGCCCTGGTCATGCAGCTCTTCCAGGACCACAGCTTCTTCCCGTCCCCCAGGCCACAGCCACCCTCCAGGCCTGCTATGCATACATCTTCCCCTCCAAGGTTTGT i manLeu1.NW_012100344v1 I 986 I 234 a score=1365.000000 s hg38.chr3_KI270784v1_alt 11464 1 + 184404 T s panTro5.chr1 222293136 1 + 228573443 T i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4205915 1 + 4392246 T i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46744328 1 - 99891981 T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55079058 1 + 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127670473 1 - 192294377 T i macFas5.chr3 C 0 C 0 e manLeu1.NW_012100344v1 141479 234 - 148006 I e chlSab2.chr21 124238046 234 - 127223203 I e macNem1.NW_012012500v1 44228 234 + 413781 I a score=230172.000000 s hg38.chr3_KI270784v1_alt 11465 101 + 184404 CTGCCCCTGCCCTGACTCCCAGCCCTGTGGGGGTCCTGACCGCACCTCACCTGGCTCAGACTCTTG--------ACGCTGCCCTGGCT-------------------GCCCCACCACTGCTTCTGCCC s panTro5.chr1 222293137 101 + 228573443 CTGCCCCTGCCCTGACTCCCAGCCCTGTGGGGGTCCTGACCGCACCTCACCTGGCTCAGACTCTTG--------ACGCTGCCCTGGCT-------------------GCCCCACCACTGCCTCTGCCC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4205916 101 + 4392246 CTGCCTCTGCCCTGACTCCCAGCCCTGTGGGGGTCCTGACCGCACCTCACCTGGCTCAGACTCTTG--------ACGCTGCCCTGGCT-------------------GCCCCACCACTGCCTCTGTCC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46744329 100 - 99891981 CTGCCCCTGCCCTGACTCCCAGCCCTGCGGGGGTCCTGACCCCACCTCATCTGGCTCAGACTC-TG--------AGGCTGCCCTGGCT-------------------GCCCCACCACTGCCTCTGCCC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55079059 122 + 185818997 CTGCCCGTGCCCCGACTCCCATCCCCGCGAGGGTCCTGACCACACCTCACCTGGCTGGGGCTC-TGGCGCTGctgccccgccactgcctcgccactgccttgccactgcctcgccactgcctc----- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127670474 124 - 192294377 CTGCCCGTGCCCCGACTCCCATCCCCGCGAGGGTCCTGACCACACCTCACCTGGCTGGGGCTC-TGGCGCTGctgccccgccactgcctcgccactgccttgccactgcctcgccactgcctcTG--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012012500v1 44462 100 + 413781 CTGCCTCTGCCTTGACTCCCAGCCCCACGGGGGTCCTGACCCCACCTCACCCGGCTTGAATTC-TG--------GCTCCGCCCAGGCC-------------------GCCCCACCACTGCTTCTGCCC i macNem1.NW_012012500v1 I 234 I 76 s chlSab2.chr21 124238280 100 - 127223203 CTGCCTCTACCCAGACTCCCAGCCCCACGGGGGTCCTGACCCCACCTCACCCGGCTTGGATTC-TG--------GCTCCACCCAGGCC-------------------GCCCCACCACTGCTTCTGCCC i chlSab2.chr21 I 234 I 76 s manLeu1.NW_012100344v1 141713 100 - 148006 CTGCCTCTGCTCAGACTCCCAGCCCCACGGGGGTCCTGACCCCATCTCACCCGGCTTGGATTC-TG--------GCTCCGCCCAGGCC-------------------GCCCCACCACTGCTTCTGCCC i manLeu1.NW_012100344v1 I 234 I 6 a score=526985.000000 s hg38.chr3_KI270784v1_alt 11566 419 + 184404 GAGAGTCACGTGAGGCTGAGAGTAGGGGCAGGGGCAGCAGTGGTGCCAGTTGGGGGGCGGTCCAGTGGGAGGAGCCTCAGCCTCGCAGGCTGCTCCGTGGGACTGATGACTGCATGATCTTCTGGGCACCTCACGGATCTTCAACTGCAGGTGAAACGGATGCTGGTGGTGGGTGCAGGGCCGCTGGGAGCTGCTGCATGGTTCCCAGAGGCTGGACTGAGGCAGGTGCCAACTGAAGCTGCTGGGGCAGCATGGGCAGGATGTTCTGCACACAAACCTTGGAGAAGAAGATGTGTGCATAGCAGGTccactgctgctgcccctgccctgactcccagccctgcctgaccccacctcaacctgctcaggctctggcacaaccctggctgccctgccactgcctctgccccAGAGTTGGG s panTro5.chr1 222293238 419 + 228573443 GAGAGTCACGTGAGGCTGAGAGTAGGGGCAGGGGCAGCAGTGGTGCCAGTTGGGGGGCGGTCCAGTGGGAGAAGCCTCAGCCTCGCGGGCTGCTCCGTGGGACTGATGACTGCATGATCTTCTGGGCACCTCACGGATCTTCAACTGCAGGTGAAACGGATGCTGGTGGTGGGTGCAGGGCCGCTGGGAGCCGCTGCATGGTTCCCAGAGGCTGGACTGGGGCAGGTGCCAACTGAAGCTGCTGGGGCAGCATGGGCAGGATGTTCTGCACACAAACCTTGGAGAAGAAGATGTGTGCATAGCGGGTCCACTGCTGCTGCCCCTGCCCTGACTCCCAGCCCTGCCTGACCCCACCTCAACCTGCTCAGGCTCTGGCGCAACGCTGGCGGCCCTGCCACTGCCTCTGCCCCAGAGTTGGG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4206017 419 + 4392246 GAGAGTCACGTGAGGCTGAGAGTAGGGGCAGGGGCAGCAGTGGTGCCAGTTGGGGGGCGGTCAAGTGGGAGGAGCCTCAGCCTCGCGGGCTGCTCCGTGGCACTGATGACTGCATGATCTTCTGGGCACCTCACGGATCTTCAACTGCAGGTGAAACGGATGCTGGTGGTGGGTGCAGGGCCGCTGGGAGCTGCTGCATGGGTCCCAGAGGCTGGACTGGGGCAGGTGCCAACTGAAGCTGCTGGGCCAGCATGGGCAGGAGGTTCTGCACACAAACCTTGGAGAAGAAGATGTGTGCATAGCGGGTCCACTGCTGCTCCccctgccctgactcccagccctacctaaccccacctcaccctgctcaggctctgttgcaaccctggctgccctgccactgcctctgcccCAGAGTTGGG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46744429 416 - 99891981 GAGAGTCACGCGAAGCTGAGAGTCGGGGCAGGGGCAGCAGTGGTGCCAGCTGGGGGGCGGTCCAGTGGGAGGTGGCTCAGCCTCGTGGGCTGCTCCGTGGGACTGATGACTGCATGATCTTCTGGGCACCTCACGGATCTTCAACTGCAGGTGAAACGGATGCTGGTGGTGGGTGCAGGGCCGCTGGGAGCCGCTGCATGGGTCCCAGAGGCTGGACTGGGGCAGGTGCCAACTGAAGCTGCTGGGGCAGCATGGGCAGGATGTTCTGCACACAAAGCTTGG---AGAAGATGTGTGCATAGTGGGTCCACTGCTGCTGCCCCTGCCCTGACTCCCAGCCCTGCCTGACCCCACCTCACCGGGCTCAGGCTCTGGCACAACCCTGGCTGCCCTGCCACTGCCTCTGCCCCAGAGTTGGG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55079181 419 + 185818997 TGGAGTCCTGCGAGGCTGGTAGTCGGAGCAGGGGCAGCAGCGGTGCCGTTTGGGGGGCAGTCCAATGAGAGGAGCCTCAGCCCCACGGGCTGCTCGGTGGGAGTGACGACTGCATGACATTCTGGGCACCTCACGGATCTTCAACTGCAGGTGAAACCGATGCTGGTGGTGGGTGCAGGGCCGCTGGGAGCCGCTGCCTGGGTCCCAGAGGCTGGGCTGGGGCAGGTGCCACCTGAAGCTGCTGGAGCAGCGTGGGCAGGATGTTCTGCACACAAACCTTGGAGGAGAAGATGTATGCATAGCTGGTCCACCACTGctgcccctgctctgactcccaggactgcctgaccccacctcaccctgctcatgctctggtgtaaccctggctgccctgccactgcctctgcccCAGAATTGGG i rheMac8.chr3 C 0 I 1 s macFas5.chr3 127670598 417 - 192294377 --GAGTCCTGCGAGGCTGGTAGTCGGAGCAGGGGCAGCAGCGGTGCCGTTTGGGGGGCAGTCCAATGAGAGGAGCCTCAGCCCCACGGGCTGCTCGGTGGGAGTGACGACTGCATGACATTCTGGGCACCTCACGGATCTTCAACTGCAGGTGAAACCGATGCTGGTGGTGGGTGCAGGGCCGCTGGGAGCCGCTGCCTGGGTCCCAGAGGCTGGGCTGGGGCAGGTGCCACCTGAAGCTGCTGGAGCAGCGTGGGCAGGATGTTCTGCACACAAACCTTGGAGGAGAAGATGTATGCATAGCTGGTCCACCACTGCTGCCCCTGCTCTGACTCCCAGGACTGCCTGACCCCACCTCACCCTGCTCATGCTCTGGTGTAACCCTGGCTGCCCTGCCACTGCCTCTGCCCCAGAATCGGG i macFas5.chr3 C 0 I 1 e manLeu1.NW_012100344v1 141813 6 - 148006 I e chlSab2.chr21 124238380 76 - 127223203 I e macNem1.NW_012012500v1 44562 76 + 413781 I a score=66399.000000 s hg38.chr3_KI270784v1_alt 11985 41 + 184404 GCCTTGACAGCCTGGTTGGAAGGGGACACCCCAGCCCTGCC s panTro5.chr1 222293657 41 + 228573443 GCCTTGACAGCCTGGTTGGAAGGGGACACCCCAGCCCTGCC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4206436 41 + 4392246 GCCTTGACAGCCTGGCTGGAAGGGGACACCCCAGCCCTGCC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46744845 41 - 99891981 GCCTCGACAGCCTGGCTGGAAGGGGACACCCCAGCCCTGCC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55079601 41 + 185818997 CCTTGGACAGCCTGGCTGGAAGGGGACTCCCTAGTCCTGAC i rheMac8.chr3 I 1 I 1 s macFas5.chr3 127671016 41 - 192294377 CCTTGGACAGCCTGGCTGGAAAGGGACTCCCTAGTCCTGAC i macFas5.chr3 I 1 I 1 s manLeu1.NW_012100344v1 141819 41 - 148006 GCCTGGACAGCCTGGCTGAAAGGGGACTCCCCAGCTCTGCC i manLeu1.NW_012100344v1 I 6 I 54 e chlSab2.chr21 124238380 76 - 127223203 I e macNem1.NW_012012500v1 44562 76 + 413781 I a score=26533.000000 s hg38.chr3_KI270784v1_alt 12026 27 + 184404 TCAACACCTGGGGGTCTCCATAACTAG s panTro5.chr1 222293698 27 + 228573443 TCAACACCTGGGGGTCTCCATAACTAC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4206477 27 + 4392246 TCAACACCTGGGGGTCTCCATAACTAC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46744886 27 - 99891981 TCAACCCCTGGGTCCCTCCATAATTAC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55079643 27 + 185818997 CCCACCCCCGGGTCCCTCCATAACTAC i rheMac8.chr3 I 1 C 0 s macFas5.chr3 127671058 27 - 192294377 CCCACCCCCGGGTCCCTCCATAACTAC i macFas5.chr3 I 1 C 0 e manLeu1.NW_012100344v1 141860 54 - 148006 I e chlSab2.chr21 124238380 76 - 127223203 I e macNem1.NW_012012500v1 44562 76 + 413781 I a score=53076.000000 s hg38.chr3_KI270784v1_alt 12053 22 + 184404 CACAGGCAGGTGGGCAACCCCA s panTro5.chr1 222293725 22 + 228573443 CACAGGCAGGTGGGCGACCCCA i panTro5.chr1 C 0 I 3 s gorGor5.CYUI01015383v1 4206504 22 + 4392246 CACAGGCAGGTGGGCGACCCCA i gorGor5.CYUI01015383v1 C 0 I 3 s nomLeu3.chr17 46744913 22 - 99891981 CACAGGCAGGTGGGGGACCCCA i nomLeu3.chr17 C 0 I 3 s rheMac8.chr3 55079670 22 + 185818997 CACAGGCAGGTGGGGGACCCCG i rheMac8.chr3 C 0 I 3 s macFas5.chr3 127671085 22 - 192294377 CACAGGCAGGTGGGGGACCCCG i macFas5.chr3 C 0 I 3 s macNem1.NW_012012500v1 44638 22 + 413781 CACAGGCAGGTGGGGGACCCCG i macNem1.NW_012012500v1 I 76 I 3 s chlSab2.chr21 124238456 22 - 127223203 CACAGGTAGGTGGGGGACCCCA i chlSab2.chr21 I 76 I 3 e manLeu1.NW_012100344v1 141860 54 - 148006 I a score=300491.000000 s hg38.chr3_KI270784v1_alt 12075 107 + 184404 AAGATCCCAGGACTCACAGTACCCCCTGAGAACATGGACAGTATGTGGGGGTAGCAATGGAGGGCAGGATGGTTATCTTCTCCCAGGTGAAGCCATTTAATCCTTT-C s panTro5.chr1 222293750 107 + 228573443 AAGATCCCAGGACTCACAGTACCCCCTGAGAACATGGACAGTATGTGGGGGTAGCAATGGAGGGCAGGATGGTTATCTTCTCCCAGGTAAAGCCATTTAATCCTTT-C i panTro5.chr1 I 3 C 0 s gorGor5.CYUI01015383v1 4206529 107 + 4392246 AAGATCCCAGGACTCACAGTACCCCCTGAGAACATGGACAGTATGTGGGGGTAGCAATGGAAGGCAGGATGGTTATCTTCTCCCAGGTAAAGCCATTTAATCCTTT-C i gorGor5.CYUI01015383v1 I 3 C 0 s nomLeu3.chr17 46744938 107 - 99891981 AAGGTCCCAGGACTCACAGTACCCCCTGAGAACATGGACAGTATGTGGGGGTAGGAATGGAGGGCAGGATGGTTATCTTCTCCCAGGTAAAGCCATATCATCCTTT-C i nomLeu3.chr17 I 3 C 0 s rheMac8.chr3 55079695 107 + 185818997 AAGATCCCAGGACTCACAGTACTCCCTGAGGACACGGACAGTATGTGGGGGTAGCAATGGAGGGCAGGATGGTTATCTTCTCCCGGGTAAAGTCATTTCATCCTTT-C i rheMac8.chr3 I 3 C 0 s macFas5.chr3 127671110 107 - 192294377 AAGATCCCAGGACTCACAGTACTCCCTGAGGACACGGACAGTATGTGGGGGTAGCAATGGAGGGCAGGATGGTTATCTTCTCCCGGGTAAAGTCATTTCATCCTTT-C i macFas5.chr3 I 3 C 0 s macNem1.NW_012012500v1 44663 100 + 413781 AAGATCCCAGGACTCATAGTACCCTCTGAGGACACAGACAGTATGTGGGGATAGCA--------TAGGATGGTTATCTCCTCCCGGGTAAAGCCATTTCATCCTTTCC i macNem1.NW_012012500v1 I 3 C 0 s chlSab2.chr21 124238481 99 - 127223203 AAGATCCCAGGACTCATAGTACCCTCTGAGGACACAGACAGTATGTGGGGATAGCA--------TAGGATGGTTATCTCCTCCCGGGTAAAGCCATTTCATCCTTT-C i chlSab2.chr21 I 3 I 19 s manLeu1.NW_012100344v1 141914 99 - 148006 AAGATCCCAGGACTCATAGTACTCTCTGAGGACACAGACAGTATGTGGGGCTAGCA--------TAGGATGGTTATCTCCTCCCGGGTAAAGCCATTTCATCCTTT-C i manLeu1.NW_012100344v1 I 54 I 1 a score=28943.000000 s hg38.chr3_KI270784v1_alt 12182 13 + 184404 AGTTTGGGACGGA s panTro5.chr1 222293857 13 + 228573443 AGTTTGGGACGGA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4206636 13 + 4392246 AGTTTGGGACGGA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46745045 13 - 99891981 AGTTTGGGATAGA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55079802 13 + 185818997 AGTTTGGGGCAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127671217 13 - 192294377 AGTTTGGGGCAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012012500v1 44763 13 + 413781 AGTTTAGGACGGA i macNem1.NW_012012500v1 C 0 I 5 s manLeu1.NW_012100344v1 142014 13 - 148006 AGTTTAGGACGGA i manLeu1.NW_012100344v1 I 1 I 5 e chlSab2.chr21 124238580 19 - 127223203 I a score=370354.000000 s hg38.chr3_KI270784v1_alt 12195 330 + 184404 GTAAGGCCTTCCTCtttttttttttttttttttttttttttttttttgagaccgagtcttgctctgtcgcccaggctggagtgcagtggtgcgatcttggctcactgcaacctcttcccgccgggttcacgccattctcctgcctcagccttccgggtagctaggattacaggtagacgctaccacgtccggctaatttttgtatttttagtacagacggggcttcatcatcttggcca-------ggctgatttcgatctcctgacattgtgatctgcctgcctccccctcccaaagtgctgggattacaggcgtgagccaccacgcctggccAAG s panTro5.chr1 222293870 312 + 228573443 GTAAGGCC------------------tttttttttttttttttttttgagaccgagtcttgctctgtcacccaggctggagtgcagtggtgcgatcttggctcactgcaacctcttcccgccgggttcacgccattctcctgcctcagccttccgggtagctaggattacaggtgcacgctaccacgtccggctaatttttgtatttttagtacagacggggcttcatcatcttggcca-------ggctgatttcgatctcctgacatcgtgatctgcctgcctccccctcccaaagtgctgggattacaggcgtgagccaccacgcctggccAAG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4206649 319 + 4392246 ATAAGGCCTGCCTCt-----------tttttttttttctttttttttgagacggagtcttgctctgtcgcccaggctggagtgcagtggtgcgatcttggctcactgcaacctcttcctgccgggttcatgccattctcctgcctcagccttccgggtagctaggattacaggtgcacactaccacgtccagctaatttttgtatttttagtacagacggggcttcatgatcttggcca-------ggctgatttcgatctcctgacatcgtgatccacctgcctccacctcccaaagtgctgggattacaggcatgagccaccacgcctggccAAG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46745058 322 - 99891981 ATAAGGCCTTCGCC------------TCtttttttttttttttttttgagacggagtctttctctgtcgcccaggctggagtgcagtggtgcgatcttggctcactgcaacctcctcctgctgggttcacgccattctcctgcctcagcctcctgggtagctgggattacaggtgcatgctaccacgtctggctaatttttgtatttttagtagagacggggtttcaccatcttggctaggctgatggctgatttcgat---ctgacatcgtgatccgcccgcccccgcctccaaaagtgctgggattacaggcgtgagccaccgtgcctggccAAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55079815 320 + 185818997 ATAAGGCCTGCTCC--tt--------tctttctttttttttttttttgaaatggagtctcgctctgtcgcccagactggagtgcagtggcgtgatcttggctcactgcaagctccgcctcccacgttgatgccattctcctgcctcagcctcccaagtagctgggattacaggtgcatgctaccacgcccggctaatttttgtatttttagtagagacagggtttcaccatcttggcca-------ggctggtctcgatctcctgaccttgtgatcctcccacctctgcctcccaaagtgctgggattacaggtgtgagccaccgcacctggccAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127671230 322 - 192294377 ATAAGGCCTGCTCCtttt--------tttttttttttttttttttttgaaatggagtctcgctctgtcgcccagactggagtgcagtggcgtgatcttggctcactgcaagctccgcctcccacgttgatgccattctcctgcctcagcctcccaagtagctgggattacaggtgcatgctaccacgcccggctaatttttgtatttttagtagagacagggtttcaccatcttggcca-------ggctggtctcgatctcctgaccttgtgatcctcccacctctgcctcccaaagtgctgggattacaggtgtgagccaccgcacctggccAAG i macFas5.chr3 C 0 C 0 e manLeu1.NW_012100344v1 142027 5 - 148006 I e chlSab2.chr21 124238580 19 - 127223203 I e macNem1.NW_012012500v1 44776 5 + 413781 I a score=112079.000000 s hg38.chr3_KI270784v1_alt 12525 38 + 184404 GCCTGCTCCTCTTATCTATAC--CCCCTACCCCTGCAGCT s panTro5.chr1 222294182 38 + 228573443 GCCTGCTCCTCTTATCTATAC--CCCCTACCCCTGCAGCT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4206968 38 + 4392246 GCCTGCTCCTCTTATCTATAC--CCCCTACCCCTGCAGCT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46745380 38 - 99891981 GCCTACTCCTCTTATGTATAC--CCCCTACCCCTGCAGCT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55080135 40 + 185818997 GCCTGCTCCTCTTATATATATACCCCCTACCCCTGCAGCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127671552 40 - 192294377 GCCTGCTCCTCTTATATATATACCCCCTACCCCTGCAGCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012012500v1 44781 38 + 413781 GCCTGCTCCTTTTTTATATAT--CCCCTACCCCTGCAGCT i macNem1.NW_012012500v1 I 5 I 34 s chlSab2.chr21 124238599 38 - 127223203 GCCTGCTCCTCTTTTATATAT--CCCCTACCCCTGCAGCT i chlSab2.chr21 I 19 I 35 s manLeu1.NW_012100344v1 142032 38 - 148006 GCCTGCTCCTCTTTTATATAT--CCCCTACCCCTGCAGCT i manLeu1.NW_012100344v1 I 5 I 35 a score=15344.000000 s hg38.chr3_KI270784v1_alt 12563 16 + 184404 GTGC-CGGGGGAAAGCT s panTro5.chr1 222294220 16 + 228573443 GTGC-AGGGGGAAAGCT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4207006 16 + 4392246 GTGC-CGGGGGAAAGCT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46745418 16 - 99891981 GTGC-CGGGGGAAAGCT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55080175 17 + 185818997 GTGAGAGGGGGAGAGCT i rheMac8.chr3 C 0 I 13 s macFas5.chr3 127671592 17 - 192294377 GTGAGAGGGGGAGAGCT i macFas5.chr3 C 0 I 13 e manLeu1.NW_012100344v1 142070 35 - 148006 I e chlSab2.chr21 124238637 35 - 127223203 I e macNem1.NW_012012500v1 44819 34 + 413781 I a score=968236.000000 s hg38.chr3_KI270784v1_alt 12579 352 + 184404 GGGCAGTTTCCCTCCTCCGAGCCCCTGTACATACCATGAATTGTGGGACCTTCAGAGCTTTTCACTTTTCGGAAAATAGCTCCTGCTGGGGCTACAAGATGGAGTGTGAAGAGGGCCTTGGGCCACAGGGAGGCGCCTGTGGACTAGGGGGAGTTCATGCACCCC-TTCTTTCCCCAGAGGGGCTGGACTCAGGTGAGTATGGGGGTGGGGGCTCCTGCACTTCGACACAGGCAGCGGGAGGGTTTTCTCCCCATTCCCT-CTGCACTCCCAACTTGAGCTATACTTTTTAAGAAAGTGATTCACCCTGCCTTTGCCCCCTTCCCCAGAACAGAACACGTTGATCGTGGGCGAC s panTro5.chr1 222294236 352 + 228573443 GGGCAGTTTCCCTCCTCCGAGCCCCTGTACATACCATGAATTGTGGGACCTTCAGAGCTTTTCACTTTTCGGAAAATAGCTCCTGCTGGGGCTACAAGATGGAGTATGAAGAGGGCCTTGGGCCACAGGGAGGCGCCTGTGGACTAGGGGGAGTTCATGCACCCC-TTCTTTCCCCAGAGGGGCTGGACTCAGGTGAGTATGGGGGTGGGGGCTCCTGCACTTCGACACAGGCAGCGGGAGGGTTTTCTCCCCATTCCCT-CTGCACTCCCAACTTGAGCTATACTTTTTAAGAAAGTGATTCACCCTGCCTTTGCCCCCTTCCCCAGAACAGAACACGTTGATCATGGGCGAT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4207022 351 + 4392246 GGGCAGTTTCCCTCCTCCGAGCCCCTATACATACCATGAATTGTGGGACCTTCAGAGCTTTTCACTTTTCGGAAAATAGCTCCTGTTGGGGCTACAAGATGGAGTGTGAAGAGGCCCTAGGGCCACAGGGAGGTGCCTGTGGACTAGGGGGAGTTCATGCACCCG-TTCTTTCCCCAGAGGAGCTGGACTCAGGTGAGTATGGTGGTGGGGGCTCCTGCACTTCGACACAGGCAGCGGGAGGGTTTTCTCCCCATTCCCT-CTGCACTCCCAACTTGAGCTATACTTTTTAAGAAAGTGATTCACCCTGCCTTTGCCCCCTT-CCCAGAATAGAACATGTTGATCATGGGCGAT i gorGor5.CYUI01015383v1 C 0 I 3118 s nomLeu3.chr17 46745434 352 - 99891981 GGGCAGTTTCCCTCCTCAGAGCCCCTGTACCTACCATGCAGTGGGGGACCTTCAGAGCTTTTCACTTTTTGGAAAATAGCTCCTGCTGGGGCTACAAGATGGAGTGTGAAGAGGGCCTTGGGCCACAGGGAGGGGCCTGTGGAATAGCGGGAGTTCATGCACCCT-TTCTTTCACCAGAGGGGCTGGACTCAGGTGAGTATGGGGGTGGGGACTCCTGCACTTTGACACAGGCAACGGGAGGGTTTTCTCCCCATTCCCT-CTGCATTCCCAACTTGAGTTGTACTTTTTAAGAAAGTGATTCTCCCTGCCTTTGCCCCCTTCCCCAGAACAGAACACGTTGATCATGGGTGAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55080205 353 + 185818997 CGGCAGTTTCCCTCCTCCCAGCCCCTGTACATAACTTGGAGTGTGTGACCTTCAGAGCTTTCCACTTAATGCAAAATAGCTCCTGCCAGGGCTGCAAGATGGAGTATGGTGCGGGCCTTGGGCCACAGGGAGGCACCTGTGGAACAGGGGGAGTTCATGCACCCCTTTTTTTCCCCAGAGGGGCCGGACTCAGCTTAGTTTGGGGGTGGGGGCTCCTGCACTTTGCTACAGGCACCAGGAGGGTTTCCTCCCCATCCCCT-CTGCCCTCCCAACTTGAGTTGTACTTTTTAAGAAGGTGATTCCCCCTGCCTTTGCCCCCGTCCCCAGAACAGAACATGTTGATCATGTGAGAT i rheMac8.chr3 I 13 C 0 s macFas5.chr3 127671622 353 - 192294377 CGGCAGTTTCCCTCCTCCCAGCCCCTGTACATAACTTGGAGTGTGTGACCTTCAGAGCTTTCCACTTAATGCAAAATAGCTCCTGCCAGGGCTGCAAGATGGAGTATGGTGCGGGCCTTGGGCCACAGGGAGGCACCTGTGGAACAGGGGGAGTTCATGCACCCCTTTTTTTCCCCAGAGGGGCCGGACTCAGCTTAGTTTGGGGGTGGGGGCTCCTGCACTTTGCTACAGGCACCAGGAGGGTTTCCTCCCCATCCCCT-CTGCCCTCCCAACTTGAGTTGTACTTTTTAAGAAGGTGATTCCCCCTGCCTTTGCCCCCGTCCCCAGAACAGAACATGTTGATCATGTGAGAT i macFas5.chr3 I 13 C 0 s macNem1.NW_012012500v1 44853 352 + 413781 GGGCAGTCTTCCTTCTCCGAGCCCCTATACATAACCTAGAGTGTGTGACCTTCAGAGCTTTTCACTTAATGCAACATAGCTCCTGCCAGGGCTGCAAGCTGGAGTGTGGTGCAGGCCTTAGGCCACA-GAAAGTACCTGTGGAATAGGGGTAGTTCATGCACCCC-TTTTTTCCCCAGAGGGGCTGGACTCAGCTTAGTTTGGGGGTGGGGGCTCCTGTACTTTGCCACAGGCACCGGGAGGGTTTTCTGCCCACCCCTTCCTGCCCTTCCAACTTGAGTTGTACTTTCTAAGAAGGTGATTCCCCCTGCCCTTGCCCCCTTCCCCAGAACAGAACATGCTGATCATGTGCAGT i macNem1.NW_012012500v1 I 34 C 0 s chlSab2.chr21 124238672 352 - 127223203 GGGCAGTCTCCCTTCTCCGAGCCCCTGTACATAACCTAGAGTGTGTGACCTTCAGAGCTTTTCACTTAATGCAACATAGCTCCTGCCAGGGCTGCAAGCTAGAGTGTGGTGCAGGCCTTAGGCCACA-GAAAGTACCTGTGGAATAGGGGTAGTTCATGCACCCC-TTTTTTCCCCAGAGGGGCTGGACTCAGGTTAGTTTGGGGGTGGGGGCTCCTGCACTTTGCCACAGGCACCAGGAGGGTTTTCTCCCCACCCCTTCCTGCCCTTCCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTGCCCTTGCCCCCTTCCCCAGAACAGAACATGTTGATCATGTGCAGT i chlSab2.chr21 I 35 C 0 s manLeu1.NW_012100344v1 142105 352 - 148006 GGGCAGTCTCCCTTCTCCGAGCCCCTGTACATAACCTAGAGTGTGTGACCTTCAGAGCTTTTCACTTAATGCAACATAGCTCCTGCCAGGGCTGCAAGCTGGAGTGTGGTGCAGGCCTTAGGCCACA-GAAAGTACCTGTGGAATAGGGGTAGTTCATGCACCTC-TTTTTTCCCCAGAGGGGCTGGACTCAGGTTAGTTTGGGGGTGGGGGCTCCTGCACTTTGCCACAGGCACCAGAAGGGTTTTCTCCCCACCCCTTCCTGCCCTTCCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTGCCCTTGCCCCCTTCCCCAGAACAGAACATGTTGATCATGTGCAGT i manLeu1.NW_012100344v1 I 35 C 0 a score=169119.000000 s hg38.chr3_KI270784v1_alt 12931 63 + 184404 ATTTTTCATTGTGCCAAAAAGTTGCCATGACCGTCATTAAACCTGTTTAACACCAAATAATAA s panTro5.chr1 222294588 63 + 228573443 ATTTTTCATTGTGCCAAAAAGTTGCCATGACCGTCATTAAACCTGTTTAACACCAAATAATAA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4210491 63 + 4392246 ATTTTTCATTGTGCCAAAAAGTTGCCATGACCGTCATTAAACCTGTTTAACACCAAATAATAA i gorGor5.CYUI01015383v1 I 3118 C 0 s nomLeu3.chr17 46745786 63 - 99891981 ATTTTTTATTGTGCCGAAAACTTGCCATGACTGTCATTAAAGCAGTTTAACACCAAATAATAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55080558 63 + 185818997 ATTTTTTATTGTGCCGAGAAGTTGCAATGACCGACATTAAAGCTGTTTAACACCAAATAATAA i rheMac8.chr3 C 0 I 109 s macFas5.chr3 127671975 63 - 192294377 ATTTTTTATTGTGCCGAGAAGTTGCAATGACCGACATTAAAGCTGTTTAACACCAAATAATAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012012500v1 45205 63 + 413781 ATTTATTACTGTGCCGAGAAGCCGCGATGACCAAGATTAAAGCTGTTTAACACCAaataataa i macNem1.NW_012012500v1 C 0 C 0 s chlSab2.chr21 124239024 63 - 127223203 ATTTATTACTGTGCCGAGAAACCGCGATGACCAAGATTAAAGCTGTTTAACACCAaataataa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 142457 63 - 148006 ATTTATTACTGTGCCGAGAAGCCACGATGACCAAGATTAAAGCTGTTTAACACCAaataataa i manLeu1.NW_012100344v1 C 0 C 0 a score=22815.000000 s hg38.chr3_KI270784v1_alt 12994 17 + 184404 GGAAAATAAAATAAAAA s panTro5.chr1 222294651 17 + 228573443 GGAAAATAAAATAAAAA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4210554 17 + 4392246 GGAAAATAAAATAAAAA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46745849 17 - 99891981 TGAAAATAAAATAAAAA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127672038 15 - 192294377 TAATGTAAAACTtga-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012012500v1 45268 17 + 413781 taataataaaataaaaa i macNem1.NW_012012500v1 C 0 N 0 s chlSab2.chr21 124239087 17 - 127223203 taataataaaataaaaa i chlSab2.chr21 C 0 N 0 s manLeu1.NW_012100344v1 142520 17 - 148006 taataataaaataaaaa i manLeu1.NW_012100344v1 C 0 N 0 e rheMac8.chr3 55080621 109 + 185818997 I a score=38893.000000 s hg38.chr3_KI270784v1_alt 13011 69 + 184404 ------------------------ACTCGGGCTTGACGCAGAAACTCACTCCAAATAAATTACCTACCAAAACATTTACATAATGGTGGAAAT s panTro5.chr1 222294668 65 + 228573443 ------------------------ATTCGGGCATGGTGCAGAAACTCACTCCAAATAAATTACCTACCAAAA----TATATAATGGTGGAAAT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4210571 69 + 4392246 ------------------------ATTCGGGCTTGGTGCAGAAACTCACTCCAAATAAATTACCTACCAAAATATTTACATAATGGTGGAAAT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46745866 69 - 99891981 ------------------------CTTAGGGCTTGGTACAGAAAATCAGTACAAATTAATTAACTACCAAAATATTTATATAACGGTGGAAAT i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127672053 93 - 192294377 cctcacgctggtttggcatgatctgttggggcctggtgcggaaactcattctgaaataattacctcccagaatttttatataaTGGTGGCTGC i macFas5.chr3 C 0 I 1 e rheMac8.chr3 55080621 109 + 185818997 I a score=71135.000000 s hg38.chr3_KI270784v1_alt 13080 57 + 184404 ATTCCAAAATTCAATA-TTTTGGGATTTATACACAAAAGATAAACAAATTAGAGGCCA s panTro5.chr1 222294733 57 + 228573443 ATTCCAAAATTCCATA-TTTTGGGATTTATACACAAAAGATAAACAAATTAGAGGCCA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4210640 57 + 4392246 ATTCCAAAATTCAGTA-TTTTGGGATTTATACACAAAAGATAAACAAATTAGAGGCCA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46745935 57 - 99891981 ATTCCAAAATTCCATA-TTTTGGAATTTATACACAAAAGATAAAAAAATTAGAGGCCA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55080730 58 + 185818997 ATTCCAAAATTCCATACTTTTGGAATTTATACACAAAAGATAAAAAAATTAGAggcca i rheMac8.chr3 I 109 I 6161 s macFas5.chr3 127672147 58 - 192294377 ATTCCAAAATTCCATACTTTTGGAATTTATACACAAAAGATAAAAAAATTAGAggcca i macFas5.chr3 I 1 I 5189 a score=25982.000000 s hg38.chr3_KI270784v1_alt 13137 12 + 184404 AGAGGCTGCCGG s panTro5.chr1 222294790 12 + 228573443 AGAGGCTGCCGG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56707350 12 + 162613886 AGAGGCCGCCAA i panPan2.chr7 N 0 C 0 s gorGor5.CYUI01015383v1 4210697 12 + 4392246 AGAGGCTGCCGG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46745992 12 - 99891981 AGAGGCTGCCGG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127677394 12 - 192294377 AGAGGCCGCTAA i macFas5.chr3 I 5189 C 0 s macNem1.NW_012013022v1 8928316 12 - 10413719 AGAGGCTGCCAA i macNem1.NW_012013022v1 N 0 C 0 s chlSab2.chr21 124136742 12 - 127223203 AGAGGCCGCCGA i chlSab2.chr21 N 0 C 0 e rheMac8.chr3 55080788 6161 + 185818997 I a score=76000.000000 s hg38.chr3_KI270784v1_alt 13149 29 + 184404 AAGGGAAAAACGGGGCCTGGAATGGCCGA s panTro5.chr1 222294802 29 + 228573443 AAGGGAAAAACGGGGCCTGGAAAGGCCGT i panTro5.chr1 C 0 C 0 s panPan2.chr7 56707362 29 + 162613886 AAGGGAAAAACTGGGCCTGGAAAGGCCGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4210709 28 + 4392246 AAGGGAAAAACGGGGCCTGGAGAGGCCG- i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46746004 29 - 99891981 AAGGGAAAAACGGGGCCCAGAAAGGCCAT i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127677406 29 - 192294377 AAGGCAAAGGCTAGGCCTGGAAAGGCCGT i macFas5.chr3 C 0 I 4 s macNem1.NW_012013022v1 8928328 29 - 10413719 AAGGGAAAAACTGGGCCTGGAAAGGCCAT i macNem1.NW_012013022v1 C 0 I 1 s chlSab2.chr21 124136754 29 - 127223203 AAGGCAAAGACTGGGCCTGGAAAGGCCGT i chlSab2.chr21 C 0 I 4 s colAng1.NW_012116633v1 738602 29 + 1536524 AAGGGAAAAACTGAGCCTGGAAAGGCCGT i colAng1.NW_012116633v1 N 0 C 0 e rheMac8.chr3 55080788 6161 + 185818997 I a score=890.000000 s hg38.chr3_KI270784v1_alt 13178 1 + 184404 C s panTro5.chr1 222294831 1 + 228573443 T i panTro5.chr1 C 0 C 0 s panPan2.chr7 56707391 1 + 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4210737 1 + 4392246 T i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46746033 1 - 99891981 T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55086949 1 + 185818997 C i rheMac8.chr3 I 6161 C 0 s macFas5.chr3 127677439 1 - 192294377 C i macFas5.chr3 I 4 C 0 s chlSab2.chr21 124136787 1 - 127223203 C i chlSab2.chr21 I 4 C 0 s colAng1.NW_012116633v1 738631 1 + 1536524 T i colAng1.NW_012116633v1 C 0 C 0 e macNem1.NW_012013022v1 8928357 1 - 10413719 I a score=17939.000000 s hg38.chr3_KI270784v1_alt 13179 5 + 184404 GTGAG s panTro5.chr1 222294832 5 + 228573443 GTGAG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56707392 5 + 162613886 GTAAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4210738 5 + 4392246 GTGAG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46746034 5 - 99891981 GTGAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55086950 5 + 185818997 GTGAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127677440 5 - 192294377 GTGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8928358 5 - 10413719 GTAAG i macNem1.NW_012013022v1 I 1 C 0 s chlSab2.chr21 124136788 5 - 127223203 GTGAC i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 738632 5 + 1536524 GTAAG i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 164834 5 + 13147851 GTGAG i saiBol1.JH378167 N 0 C 0 a score=173214.000000 s hg38.chr3_KI270784v1_alt 13184 39 + 184404 GAATGAGCTGGGCCTAAAGAGGCCACTGGCAGGCA-GGAG s panTro5.chr1 222294837 39 + 228573443 GAATGAGCTGGGCCTAAAGAGGCCACTGGCAGGCA-ATAG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56707397 39 + 162613886 GAATGAGCTGGGCCTAAAGAGGTCATTGAAAGGCA-GGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4210743 40 + 4392246 GAATGAGCTGGGCCTAAAGAGGCCACTGGCAGGCAGGGAG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46746039 39 - 99891981 GAATGAGGTGGGCCTGAAGAGGCCACTGGCAGGTG-GGAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55086955 39 + 185818997 GAATGAGCCGGGCCTAACGAGGCCACTGGGAGGCA-GGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127677445 39 - 192294377 GAATGAGCCGGGCCTAACGAGGCCACTGGGAGGCA-TGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8928363 39 - 10413719 GAATGAGCTGGGCCCAAAGAGGCCATTGAAAGGCA-GAAG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 22976 39 - 113584 GAATGAGCCGGGCCTAGTGAGACCACTGGGAGGCA-GGAG i cerAty1.NW_012005081v1 N 0 C 0 s chlSab2.chr21 124136793 39 - 127223203 GAATGAGTTGGGCCTAATGAGGCCACTGGGAGTCA-GGAG i chlSab2.chr21 C 0 I 30 s colAng1.NW_012116633v1 738637 39 + 1536524 GAATGAGCTGGGCCCAAAGAGGCCATTGAAAGGCA-GAAG i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 164839 38 + 13147851 GCCTGATCTTGGCCTAA-GAGGCCATTGGGTGGCA-GGAA i saiBol1.JH378167 C 0 C 0 a score=71601.000000 s hg38.chr3_KI270784v1_alt 13223 27 + 184404 CT-GGACCTGCCGAAGTGGCCGAAAGGC s panTro5.chr1 222294876 27 + 228573443 CT-GGACCTGCCGAAGTGGCCGAAAGGC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56707436 27 + 162613886 CT-GGGCTTGTCGAAGCTGCCAAAAGTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4210783 26 + 4392246 CTGGGACCTGCC-AAGTGGCTG-AAGGC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46746078 27 - 99891981 CT-GGGTCTGCCGAAGTGGCCGAAAGGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55086994 27 + 185818997 CG-GGGCGCGGCGGAGCTGCCGAAAGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127677484 27 - 192294377 CG-GGGCCCGGCGGAGCTGCCGAAAGGC i macFas5.chr3 C 0 I 574 s macNem1.NW_012013022v1 8928402 27 - 10413719 CT-GGGCTTGTCAAAGTTGCCAAAAGGC i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 23015 27 - 113584 CG-GGTCCCGGCGGTGCTGCCGAAAGGC i cerAty1.NW_012005081v1 C 0 C 0 s colAng1.NW_012116633v1 738676 27 + 1536524 CT-GGACTTGTCGAAGCTGCCAAAAGGC i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 164877 27 + 13147851 CT-GGGTGTGTAGACACTGCTGAAAGGC i saiBol1.JH378167 C 0 C 0 e chlSab2.chr21 124136832 30 - 127223203 I a score=30371.000000 s hg38.chr3_KI270784v1_alt 13250 5 + 184404 AGGAG s panTro5.chr1 222294903 5 + 228573443 AGGAG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56707463 5 + 162613886 AGGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4210809 5 + 4392246 AGGAG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46746105 5 - 99891981 AGGAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55087021 5 + 185818997 AGGAG i rheMac8.chr3 C 0 I 783 s macFas5.chr3 127678085 5 - 192294377 AGGAG i macFas5.chr3 I 574 C 0 s macNem1.NW_012013022v1 8928429 5 - 10413719 AGGAG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 23042 5 - 113584 AGGAG i cerAty1.NW_012005081v1 C 0 I 3 s chlSab2.chr21 124136862 5 - 127223203 AGGAG i chlSab2.chr21 I 30 C 0 s colAng1.NW_012116633v1 738703 5 + 1536524 AGGAG i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 164904 5 + 13147851 AGGAA i saiBol1.JH378167 C 0 C 0 a score=9042.000000 s hg38.chr3_KI270784v1_alt 13255 2 + 184404 CT s panTro5.chr1 222294908 2 + 228573443 CT i panTro5.chr1 C 0 C 0 s panPan2.chr7 56707468 2 + 162613886 TT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4210814 2 + 4392246 CT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46746110 2 - 99891981 CT i nomLeu3.chr17 C 0 I 830 s rheMac8.chr3 55087809 2 + 185818997 CT i rheMac8.chr3 I 783 C 0 s macFas5.chr3 127678090 2 - 192294377 CT i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8928434 2 - 10413719 TT i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 23050 2 - 113584 CT i cerAty1.NW_012005081v1 I 3 C 0 s chlSab2.chr21 124136867 2 - 127223203 CT i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 738708 2 + 1536524 TT i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 164909 2 + 13147851 CT i saiBol1.JH378167 C 0 C 0 a score=217259.000000 s hg38.chr3_KI270784v1_alt 13257 62 + 184404 TTGGACTGGGGAGGCCGCAGTGAGGCGAGAGCTAGCTGGGCGTGGAGAGTCC-GCTGTGAGGC s panTro5.chr1 222294910 62 + 228573443 TTGGACTGGGGAGGCCGCAGTGAGGCGAGAGCTAGCTGGGCGTGGAGAGTCC-GCTGTGAGGC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56707470 54 + 162613886 TTGGACTGGGGAGGCTACAGTGAGGCAAG----AGCTGCGTGTGGAGAGTCT-GCTGTG---- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4210816 62 + 4392246 TTGGACT-GGGAGGCCCAAGTGAGGCGAGAGCTAGCTGGGCGTGGAGAGTCCTGCTGTGAGGC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46746942 58 - 99891981 TTGGACTGGGGAGGCCGCAGTGAGGCGAGAGCTGGCTGGGCATGGAGAGTCC-GCTGTG---- i nomLeu3.chr17 I 830 C 0 s rheMac8.chr3 55087811 58 + 185818997 CTGGCCTGGGGAGGCCGCAGTCAGGCGAG----AGCTGGGCGTGGAGAGTCC-GCTGGGAGGC i rheMac8.chr3 C 0 I 931 s macFas5.chr3 127678092 53 - 192294377 CTGGCCTGGGGAGGCCGCAGTCAGGCGAG----AGCTGGGTGTGGGGAGTCC-GCTGG----- i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8928436 53 - 10413719 TTGGACTAGTGAGGCTACAGTGAGGCAAG----AGCTGGGCGTGGAGAGTCC-ACTGT----- i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 23052 52 - 113584 CTGGCCTGGGGAGGCCGCAGTCAGGCGAG----AGCTGGGCGTGGAGAGTCC-GCTG------ i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124136869 58 - 127223203 CTGGCCTGGGGAGGCCGCAGTCAGGCGAG----AGCTGGGCGTGGACAGTCC-GCTGTGAGGC i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 738710 53 + 1536524 TTGGACTAGGGAGGCTACAGTGAGGCAAG----AGCTGGGCGTGGAGAGTTC-CCTGT----- i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 164911 57 + 13147851 -TGGCTTGGTGGGGCCATGGTGAGGCAGA----TGCTGGATGTGAAGAGCCT-GCTGTGAGGC i saiBol1.JH378167 C 0 C 0 a score=284869.000000 s hg38.chr3_KI270784v1_alt 13319 80 + 184404 CGAGGCCGAGGCCGGGCCCGTGCAGGCCTTCGAGAGGCAGGAGGCCGGGCCTGCAAAGG-CCGACTGGAGATCAAGTTCTG s panTro5.chr1 222294972 80 + 228573443 CCAGGCCGAGGCCGGGCCCGTGCAGGCTTTCGAGAGGCAGGAGGCCGGGCCTGCAAAGG-CCGACTGGAGATCAAGTTCTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56707524 77 + 162613886 --AGGTAGAGGCTGGGCCTGTACAGGCCTTAAGAAGGCAGGA-GCTGGGCCTGGAGAGG-CTGACTTGAATTCAAGTTCTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4210878 76 + 4392246 -----TTGAGTCCGGGCCCGTGCAGGCCTTCGAGAGGCAGGAGGCCGGGCCTGCAAAGGCCCGACTGGAGGTCAAGTTCTG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46747000 78 - 99891981 --AGGCAGAGGCTGGGCCTGTGCAGGCCTTCGGGAGGCAGGAGGTCAGGCCTGGAGAGG-CTGAGTGGAGGTCAAGTTCTG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55088800 80 + 185818997 GGAGGCAGAGGCTGGGCCTGTGCAGGCCTTCTGGCGGCAGGAGGCTGGGCCTGGCGAGG-CTGACTGGAGGTCAAGTCCTG i rheMac8.chr3 I 931 C 0 s macFas5.chr3 127678145 79 - 192294377 -GAGGCAGAGGCTGCGCCTGTGCAGGCCTTCGGGCGGCAGGAGGCTGGGCCTGGTGAGG-CCGACTGGAGGTTAAATCCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8928489 78 - 10413719 -GAGGCAGAGGTTGGGCCTGTATAGGCCTTCAGAAGGCAGGA-GCTGGGCCTGGAGAGG-CCGACTTCAGGTCAAGTTCTG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 23104 80 - 113584 GGAGGCAGAGGCTGGGCCTGTGCAGGCCTTCGGGAGGCAGGAGGCTGGGCCGGGCAAGG-CCGACTGGAGGTCAAGTCCTG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124136927 74 - 127223203 ------AGAGGCTGCGCCTGTGCAGGCCTTCGCGAGGCAGGAGGTTGGGCCTGGCGAGG-CCGACTGGAGGTCAAGTCCTG i chlSab2.chr21 C 0 I 1709 s colAng1.NW_012116633v1 738763 78 + 1536524 -GAGGCAGAGGTTGGGCCTGTACAGGCCTTCAGAAGGCAGGA-GCTGGGCCTGGAGAGG-CTGACTTGAGGTCAAGTTCTG i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 164968 40 + 13147851 ---------------------------------------AGAGGTTAGGCCTGCAGAGG-CAGA-TGGGAGCTAGGAGCTG i saiBol1.JH378167 C 0 C 0 a score=57393.000000 s hg38.chr3_KI270784v1_alt 13399 13 + 184404 CGCCTGAAGAGGC s panTro5.chr1 222295052 13 + 228573443 CGCCTGAAGAGGC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56707601 13 + 162613886 GGCCTGAAGAGGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4210954 13 + 4392246 GGCCTGAAGAGGC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46747078 13 - 99891981 GGACTGAAGAGGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55088880 13 + 185818997 GGCCTGAAGAGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127678224 13 - 192294377 GGCCTGAGGAAGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8928567 13 - 10413719 GGCCTGAAGAGGC i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 23184 13 - 113584 GGCCTGAGGAGGC i cerAty1.NW_012005081v1 C 0 I 643 s colAng1.NW_012116633v1 738841 13 + 1536524 GGCCTGAAGGGGC i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 165008 13 + 13147851 GGCCTGGAGAGGC i saiBol1.JH378167 C 0 C 0 e chlSab2.chr21 124137001 1709 - 127223203 I a score=12697.000000 s hg38.chr3_KI270784v1_alt 13412 4 + 184404 TGCC s panTro5.chr1 222295065 4 + 228573443 CGCC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56707614 4 + 162613886 CACC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4210967 4 + 4392246 CACC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46747091 4 - 99891981 CGCC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55088893 4 + 185818997 CGCC i rheMac8.chr3 C 0 I 554 s macFas5.chr3 127678237 4 - 192294377 CGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8928580 4 - 10413719 CACC i macNem1.NW_012013022v1 C 0 C 0 s colAng1.NW_012116633v1 738854 4 + 1536524 CACC i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 165021 4 + 13147851 TGCC i saiBol1.JH378167 C 0 C 0 e cerAty1.NW_012005081v1 23197 643 - 113584 I e chlSab2.chr21 124137001 1709 - 127223203 I a score=23920.000000 s hg38.chr3_KI270784v1_alt 13416 14 + 184404 AAAAGTCAAAAGCA s panTro5.chr1 222295069 14 + 228573443 AAAAGTCAAAAGCG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56707618 12 + 162613886 --AAGTCAAAAGCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4210971 14 + 4392246 AAAAGTCAAAAGCG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46747095 14 - 99891981 AAAAGTCACAAGCA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678241 14 - 192294377 CAGAGGTGTGAGCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8928584 14 - 10413719 AAAAGTCAAAAGCA i macNem1.NW_012013022v1 C 0 C 0 s colAng1.NW_012116633v1 738858 14 + 1536524 AAAAGTCAAAAGCA i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 165025 14 + 13147851 GGCAAGCAGTAGCT i saiBol1.JH378167 C 0 C 0 e cerAty1.NW_012005081v1 23197 643 - 113584 I e rheMac8.chr3 55088897 554 + 185818997 I e chlSab2.chr21 124137001 1709 - 127223203 I a score=37435.000000 s hg38.chr3_KI270784v1_alt 13430 36 + 184404 GGGCCTGCGAAGGCCGCCGAGAGCCATGAGCTGGGC s panTro5.chr1 222295083 36 + 228573443 GGGCCTGGGAAGGCCGCCGAGAGCCATGAGCTGGGC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56707630 27 + 162613886 GGGCCTGAGAAGGCCACCAAGAGGCAT--------- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4210985 36 + 4392246 GGGCCTGGGAAGGCCGCCGAGAGCCATGAGCTGGTC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46747109 36 - 99891981 GGACCGGGGAAGGCCGCCAAGAGGCATAAGCTGGGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55089451 36 + 185818997 GGGCCTGAGGAGGCCGCCCAGAGGCGTGAGCGGGGC i rheMac8.chr3 I 554 C 0 s macFas5.chr3 127678255 4 - 192294377 --------------------------------GGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8928598 4 - 10413719 --------------------------------GGGC i macNem1.NW_012013022v1 C 0 C 0 s colAng1.NW_012116633v1 738872 36 + 1536524 GGGCCTGGGAACGCCACTAAGAGGCATGAGCTGGGC i colAng1.NW_012116633v1 C 0 I 16 s saiBol1.JH378167 165039 30 + 13147851 TCACCTGGGGAGGCCGC-AGGAGGCTTAAGC----- i saiBol1.JH378167 C 0 C 0 e cerAty1.NW_012005081v1 23197 643 - 113584 I e chlSab2.chr21 124137001 1709 - 127223203 I a score=7272.000000 s hg38.chr3_KI270784v1_alt 13466 7 + 184404 TGGGCTG s panTro5.chr1 222295119 7 + 228573443 TGGGCCG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4211021 7 + 4392246 TGGGCTG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46747145 7 - 99891981 TGGGCTG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55089487 7 + 185818997 TGGGCCT i rheMac8.chr3 C 0 I 1 s macFas5.chr3 127678259 7 - 192294377 TGGGCCT i macFas5.chr3 C 0 I 1 s macNem1.NW_012013022v1 8928602 4 - 10413719 CTGG--- i macNem1.NW_012013022v1 C 0 C 0 s saiBol1.JH378167 165069 7 + 13147851 TGGGCCT i saiBol1.JH378167 C 0 C 0 e cerAty1.NW_012005081v1 23197 643 - 113584 I e colAng1.NW_012116633v1 738908 16 + 1536524 I e chlSab2.chr21 124137001 1709 - 127223203 I e panPan2.chr7 56707657 0 + 162613886 C a score=-1390.000000 s hg38.chr3_KI270784v1_alt 13473 1 + 184404 -A s panTro5.chr1 222295126 1 + 228573443 -A i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4211028 1 + 4392246 -A i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46747152 1 - 99891981 -A i nomLeu3.chr17 C 0 C 0 s chlSab2.chr21 124138710 1 - 127223203 -A i chlSab2.chr21 I 1709 C 0 s saiBol1.JH378167 165076 1 + 13147851 C- i saiBol1.JH378167 C 0 C 0 e cerAty1.NW_012005081v1 23197 643 - 113584 I e colAng1.NW_012116633v1 738908 16 + 1536524 I e rheMac8.chr3 55089494 1 + 185818997 I e macNem1.NW_012013022v1 8928606 0 - 10413719 C e macFas5.chr3 127678266 1 - 192294377 I e panPan2.chr7 56707657 0 + 162613886 C a score=138088.000000 s hg38.chr3_KI270784v1_alt 13474 48 + 184404 AAGAGGCCACTGGGAGGCAGGAGGAGCTGGGCCTGGAGAGGCTGACTC s panTro5.chr1 222295127 48 + 228573443 AAGAGGCCACTGGGAGGCAGGAGGAGCTGGGCCTGGAGAGGCTGACTC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56707657 25 + 162613886 -----------------------GAGCTGGGCCTGGACAGGCTGATGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4211029 47 + 4392246 AAGAGGCCACTGGGA-GCAGGAGGAGCTGGGCCTGGAGAGGCTGAGTC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46747153 48 - 99891981 AAGAGGCCACTGGGAGGCAGGAGGAGCTGGGCCTGGAGAGGCTGACTC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55089495 48 + 185818997 AAGAGGCCAGTGGCAGGCAGGAGGAGCTGGGCCTGGAGGGGCTGACCT i rheMac8.chr3 I 1 C 0 s macFas5.chr3 127678267 48 - 192294377 AAGAGGCCAGTGGCAGGCAGGAGGAGCTGGGCCTGGAGGGGCTGACCT i macFas5.chr3 I 1 C 0 s macNem1.NW_012013022v1 8928606 44 - 10413719 -GAAGGCCACCGAGAGGC---ATGAGCTGGGCCTGGACAGGCTGACAG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 23840 48 - 113584 AAGAGGCCAGTGGCACGCAGGAGGAGCTGGACCTGGAGAGGCTGGCCT i cerAty1.NW_012005081v1 I 643 C 0 s chlSab2.chr21 124138711 45 - 127223203 AAGAGGCCACTGGGAGGC---AGGAGTTGGGCCTGGAGAGGCTAACTT i chlSab2.chr21 C 0 C 0 s saiBol1.JH378167 165077 45 + 13147851 AAGAGCCCAGTGTGAGGC---AATTGCTAAGCCTGGAGTTGCCAACTT i saiBol1.JH378167 C 0 C 0 e colAng1.NW_012116633v1 738908 16 + 1536524 I a score=108376.000000 s hg38.chr3_KI270784v1_alt 13522 23 + 184404 GAGGAAGTTTTGCACCTGGAGAG s panTro5.chr1 222295175 23 + 228573443 GAGGAAGTTTTGCACCTGGAGAG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56707682 23 + 162613886 GAGGAAGTTTTGCACCTGGAGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4211076 23 + 4392246 GAGGAAGTTTTGCACCTGGAGAG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46747201 23 - 99891981 GAGGAAGTTTTGCACCTGGAGAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55089543 23 + 185818997 GAGGAAGTTTGGTGGCTGGAGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127678315 23 - 192294377 GAGGAAGTCTGGCAGCTGGAGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8928650 23 - 10413719 GAGAAAGTTTTGCACCTGGAGAG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 23888 23 - 113584 GAGGAAGTCTGGCAGCTGAAGAG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124138756 23 - 127223203 GAGGCAGTTGTGCACCTGGAGAG i chlSab2.chr21 C 0 I 269 s colAng1.NW_012116633v1 738924 23 + 1536524 GAGAAAGTTTTGCACCTGGAGAG i colAng1.NW_012116633v1 I 16 C 0 s saiBol1.JH378167 165122 23 + 13147851 GAGGAAGATTCCAGCCAGGAGAG i saiBol1.JH378167 C 0 I 32 a score=9095.000000 s hg38.chr3_KI270784v1_alt 13545 3 + 184404 GCC s panTro5.chr1 222295198 3 + 228573443 GCC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56707705 3 + 162613886 GCC i panPan2.chr7 C 0 I 90 s gorGor5.CYUI01015383v1 4211099 3 + 4392246 GCC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46747224 2 - 99891981 GC- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55089566 3 + 185818997 GCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127678338 3 - 192294377 GCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8928673 3 - 10413719 GCC i macNem1.NW_012013022v1 C 0 I 90 s cerAty1.NW_012005081v1 23911 3 - 113584 GCC i cerAty1.NW_012005081v1 C 0 C 0 s colAng1.NW_012116633v1 738947 3 + 1536524 GCC i colAng1.NW_012116633v1 C 0 I 90 s saiBol1.JH378167 165177 3 + 13147851 GCT i saiBol1.JH378167 I 32 C 0 e chlSab2.chr21 124138779 269 - 127223203 I a score=33340.000000 s hg38.chr3_KI270784v1_alt 13548 22 + 184404 GTCGAGAGGACGGAGCTGGGCC s panTro5.chr1 222295201 22 + 228573443 GCCGAGAGGACGGAGCTGGGCC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4211102 21 + 4392246 ACCGAGAGGA-GGAGCTGGGCC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46747226 12 - 99891981 ----------CGGAGCTGAGCC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55089569 22 + 185818997 GCGGAGGGGCAGGAGCTGGGCC i rheMac8.chr3 C 0 I 67 s macFas5.chr3 127678341 22 - 192294377 GCGGAGAGGCAGGAGCTGGGCC i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 23914 22 - 113584 GCGGAGAGACAGGAGCTGGGCC i cerAty1.NW_012005081v1 C 0 C 0 s saiBol1.JH378167 165180 22 + 13147851 GCTGAAAGGCAGGAGCTTGGCC i saiBol1.JH378167 C 0 C 0 e colAng1.NW_012116633v1 738950 90 + 1536524 I e chlSab2.chr21 124138779 269 - 127223203 I e macNem1.NW_012013022v1 8928676 90 - 10413719 I e panPan2.chr7 56707708 90 + 162613886 I a score=3965.000000 s hg38.chr3_KI270784v1_alt 13570 14 + 184404 -----------CAGGGAGGCCGACT s panTro5.chr1 222295223 14 + 228573443 -----------CGGGGAGGCTGACT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4211123 14 + 4392246 -----------CGGGGAGGCCGACT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46747238 5 - 99891981 -----------AGGGG--------- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678363 14 - 192294377 -----------GGCAGAGACCGACT i macFas5.chr3 C 0 I 8 s cerAty1.NW_012005081v1 23936 14 - 113584 -----------GGCGGAGGCCGACT i cerAty1.NW_012005081v1 C 0 I 52 s saiBol1.JH378167 165202 23 + 13147851 TCGCGGCGCTGTGGGGAAACAGA-- i saiBol1.JH378167 C 0 C 0 e colAng1.NW_012116633v1 738950 90 + 1536524 I e rheMac8.chr3 55089591 67 + 185818997 I e chlSab2.chr21 124138779 269 - 127223203 I e macNem1.NW_012013022v1 8928676 90 - 10413719 I e panPan2.chr7 56707708 90 + 162613886 I a score=-832.000000 s hg38.chr3_KI270784v1_alt 13584 24 + 184404 TGCTGCTCTTCCAGGCCCACTTCC- s panTro5.chr1 222295237 24 + 228573443 TGCTGCTCTTCCAGGCCCACTTCC- i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4211137 12 + 4392246 TGCAGCTCTTCC------------- i gorGor5.CYUI01015383v1 C 0 C 0 s macFas5.chr3 127678385 19 - 192294377 AGTTGGGCCCGCAGGGTCC------ i macFas5.chr3 I 8 I 26 s saiBol1.JH378167 165225 25 + 13147851 TGCTGGGCCTGGAGAGTCTGCTGTG i saiBol1.JH378167 C 0 C 0 e cerAty1.NW_012005081v1 23950 52 - 113584 I e colAng1.NW_012116633v1 738950 90 + 1536524 I e rheMac8.chr3 55089591 67 + 185818997 I e chlSab2.chr21 124138779 269 - 127223203 I e macNem1.NW_012013022v1 8928676 90 - 10413719 I e nomLeu3.chr17 46747243 0 - 99891981 C e panPan2.chr7 56707708 90 + 162613886 I a score=139174.000000 s hg38.chr3_KI270784v1_alt 13608 36 + 184404 AGGCCGACTTGAGGACGACTTGGGCCTGCAGAGGCC s panTro5.chr1 222295261 30 + 228573443 AGGCCGATTTGAGGACGACTTGGGCCTGCA------ i panTro5.chr1 C 0 C 0 s panPan2.chr7 56707798 36 + 162613886 AGGCCAATTTGAGGATGATTTGGGCCTGCAGAGGTT i panPan2.chr7 I 90 C 0 s gorGor5.CYUI01015383v1 4211149 35 + 4392246 AGGCCGACTTGA-GATGACTTGGGCCTGCAGAGGCT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46747243 36 - 99891981 AAGCCCACTTGAGGATGACTTAGGCCTGCAGAGGCC i nomLeu3.chr17 C 0 I 811 s rheMac8.chr3 55089658 36 + 185818997 AGGCCGACTCGAGGCCAGCGTGGGCCTGCAGAGGCC i rheMac8.chr3 I 67 C 0 s macFas5.chr3 127678430 36 - 192294377 AGGCCGACTCGAGGCCAGCGTGGGCCTGCAGAGGCC i macFas5.chr3 I 26 C 0 s macNem1.NW_012013022v1 8928766 36 - 10413719 AGGCCAACTTGAGGACGATTTGGACCTGCAGAGGTT i macNem1.NW_012013022v1 I 90 C 0 s cerAty1.NW_012005081v1 24002 36 - 113584 AGGCCGACTCGAGGCCAACGTGGGCCTGCAGAGGCC i cerAty1.NW_012005081v1 I 52 C 0 s chlSab2.chr21 124139048 36 - 127223203 AGGCTGACTTCAGGACGATTTGGGCCTGCAGAGGCC i chlSab2.chr21 I 269 I 278 s colAng1.NW_012116633v1 739040 36 + 1536524 AGGCCAACTTGAGGACGATTTGGGCCTGCAGAGGTT i colAng1.NW_012116633v1 I 90 C 0 s saiBol1.JH378167 165250 26 + 13147851 AGGCAGAGTTG----------GGGCCTGTAGAGGCC i saiBol1.JH378167 C 0 C 0 a score=39078.000000 s hg38.chr3_KI270784v1_alt 13644 9 + 184404 GCCGGGAGG s panPan2.chr7 56707834 9 + 162613886 GCTGGGAGG i panPan2.chr7 C 0 I 783 s gorGor5.CYUI01015383v1 4211184 9 + 4392246 GCTGGGAGG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748090 9 - 99891981 GCTGGGAGA i nomLeu3.chr17 I 811 C 0 s rheMac8.chr3 55089694 9 + 185818997 GCCGGGAGG i rheMac8.chr3 C 0 I 35 s macFas5.chr3 127678466 9 - 192294377 ACTGGGAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8928802 9 - 10413719 GCTGGGAGG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 24038 9 - 113584 GCCGGGAGG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124139362 9 - 127223203 GCCAGGAGG i chlSab2.chr21 I 278 C 0 s colAng1.NW_012116633v1 739076 9 + 1536524 GCTGGGAGG i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 165276 9 + 13147851 GATGGGAGG i saiBol1.JH378167 C 0 C 0 e panTro5.chr1 222295291 0 + 228573443 C a score=49972.000000 s hg38.chr3_KI270784v1_alt 13653 20 + 184404 CTGGAGCTAAGCCTGGAGAG s gorGor5.CYUI01015383v1 4211193 20 + 4392246 CCAGAGCTGGGCCTGGAGAG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748099 20 - 99891981 CTGGAGCTGGGCCTGGAGAG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678475 19 - 192294377 -AGGAGCTGGGCCTGGAGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8928811 19 - 10413719 -AAGAGCTAGGCCTGGAGAG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 24047 19 - 113584 -AGGAGCTGGGCCTGGAGAG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124139371 20 - 127223203 CAAGAGCTATGCCTGGAGAG i chlSab2.chr21 C 0 I 983 s colAng1.NW_012116633v1 739085 19 + 1536524 -AAGAGCTAGGCCTGGAGAG i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 165285 20 + 13147851 CAGGAGTTGGACCTGGAATG i saiBol1.JH378167 C 0 C 0 e rheMac8.chr3 55089703 35 + 185818997 I e panPan2.chr7 56707843 783 + 162613886 I e panTro5.chr1 222295291 0 + 228573443 C a score=7123.000000 s hg38.chr3_KI270784v1_alt 13673 4 + 184404 ACTG s gorGor5.CYUI01015383v1 4211213 4 + 4392246 GCCG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748119 4 - 99891981 GCCG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678494 4 - 192294377 GCCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8928830 4 - 10413719 GCTG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 24066 4 - 113584 GCTG i cerAty1.NW_012005081v1 C 0 I 752 s colAng1.NW_012116633v1 739104 4 + 1536524 GCTG i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 165305 4 + 13147851 GCAG i saiBol1.JH378167 C 0 C 0 e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124139391 983 - 127223203 I e panPan2.chr7 56707843 783 + 162613886 I e panTro5.chr1 222295291 0 + 228573443 C a score=3408.000000 s hg38.chr3_KI270784v1_alt 13677 3 + 184404 ACT s gorGor5.CYUI01015383v1 4211217 3 + 4392246 ACT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748123 3 - 99891981 AAG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678498 3 - 192294377 ACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8928834 3 - 10413719 ACT i macNem1.NW_012013022v1 C 0 I 438 s colAng1.NW_012116633v1 739108 3 + 1536524 ACT i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 165309 3 + 13147851 ACT i saiBol1.JH378167 C 0 C 0 e cerAty1.NW_012005081v1 24070 752 - 113584 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124139391 983 - 127223203 I e panPan2.chr7 56707843 783 + 162613886 I e panTro5.chr1 222295291 0 + 228573443 C a score=-6079.000000 s hg38.chr3_KI270784v1_alt 13680 11 + 184404 ---------------TCGGGACGATT----------------- s gorGor5.CYUI01015383v1 4211220 11 + 4392246 ---------------TCGGGACGATT----------------- i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748126 11 - 99891981 ---------------TCAGGACGACT----------------- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678501 10 - 192294377 ----------------CGAGGCCAGC----------------- i macFas5.chr3 C 0 I 1 s colAng1.NW_012116633v1 739111 9 + 1536524 -----------------GGGGGAAGT----------------- i colAng1.NW_012116633v1 C 0 I 2 s saiBol1.JH378167 165312 43 + 13147851 TGAGAAAGATGTCAGTCTGGAGAGGCCACCGAGACGCAGGAAC i saiBol1.JH378167 C 0 C 0 e cerAty1.NW_012005081v1 24070 752 - 113584 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124139391 983 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e panPan2.chr7 56707843 783 + 162613886 I e panTro5.chr1 222295291 0 + 228573443 C a score=14352.000000 s hg38.chr3_KI270784v1_alt 13691 8 + 184404 TGGGCCTG s gorGor5.CYUI01015383v1 4211231 8 + 4392246 TGGGCCTA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748137 8 - 99891981 TTGGCCTG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678512 8 - 192294377 TGGGCCTG i macFas5.chr3 I 1 C 0 s cerAty1.NW_012005081v1 24822 8 - 113584 TGGGCCTG i cerAty1.NW_012005081v1 I 752 C 0 s colAng1.NW_012116633v1 739122 8 + 1536524 TGGGCCTG i colAng1.NW_012116633v1 I 2 I 419 s saiBol1.JH378167 165355 8 + 13147851 TGGGCCTG i saiBol1.JH378167 C 0 C 0 e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124139391 983 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e panPan2.chr7 56707843 783 + 162613886 I e panTro5.chr1 222295291 0 + 228573443 C a score=26634.000000 s hg38.chr3_KI270784v1_alt 13699 17 + 184404 CGGAGGCCGCCGGGAGG s panTro5.chr1 222295291 15 + 228573443 --GAGGCCACCGGGAGG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4211239 17 + 4392246 CAGAGGCCGCCGGGAGG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748145 17 - 99891981 CAGAGACCGCCGGGAGG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678520 17 - 192294377 CTGCGGTCGCCGGGAGG i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 24830 17 - 113584 CAGAGGCCGCCGGGAGG i cerAty1.NW_012005081v1 C 0 I 135 s saiBol1.JH378167 165363 17 + 13147851 AAGAGGCCGCCGAGAGG i saiBol1.JH378167 C 0 C 0 e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124139391 983 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e panPan2.chr7 56707843 783 + 162613886 I a score=36294.000000 s hg38.chr3_KI270784v1_alt 13716 68 + 184404 CCCAAGCTGGGCCTAGAGGAGCCCACCGACCGGAGGCCATTTGGGGCCTGCAGATGTCATCGGAGGGC s panTro5.chr1 222295306 67 + 228573443 CCCAAGCTGGGCCTAGAGGAGCCCAACGACCGGAGGCCGTTTGGGGCCTGCAGATGCCATCGGAGGG- i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4211256 45 + 4392246 CCCAAGCTGGGCCTAGAGGAGCCCACTGACCT----------------------TGCCATTGGAGGG- i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748162 66 - 99891981 CCCAAGCTGGGCCCAGAGGA-CCCACCGACCAGAGGCCATTTGGGGCCTGGAGACGCCGTCGGAGGG- i nomLeu3.chr17 C 0 I 1 s macFas5.chr3 127678537 62 - 192294377 -AGGAGCTGGGCCTGGAGAGGC----TGGCTGCAGGAAGTCTGGGGCGTGGAGACGCCGTCGGAGGG- i macFas5.chr3 C 0 C 0 s saiBol1.JH378167 165380 63 + 13147851 CATGGGCTGTGCCTAAAGTGGC----TGACTTGAGAAAGTTTGGGGCCTGGACAGCCTGTCAGGGGA- i saiBol1.JH378167 C 0 C 0 e cerAty1.NW_012005081v1 24847 135 - 113584 I e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124139391 983 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e panPan2.chr7 56707843 783 + 162613886 I a score=5331.000000 s hg38.chr3_KI270784v1_alt 13784 3 + 184404 CAG s panTro5.chr1 222295373 3 + 228573443 CAG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56708626 3 + 162613886 CAG i panPan2.chr7 I 783 C 0 s gorGor5.CYUI01015383v1 4211301 3 + 4392246 CAG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748229 2 - 99891981 -AG i nomLeu3.chr17 I 1 C 0 s macFas5.chr3 127678599 3 - 192294377 CAG i macFas5.chr3 C 0 C 0 s saiBol1.JH378167 165443 3 + 13147851 CAG i saiBol1.JH378167 C 0 C 0 e cerAty1.NW_012005081v1 24847 135 - 113584 I e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124139391 983 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I a score=53525.000000 s hg38.chr3_KI270784v1_alt 13787 21 + 184404 GAGCTGAGCCTGGAGAGGCCA s panTro5.chr1 222295376 21 + 228573443 GAGCTGAGCCTGGAGAGGCCA i panTro5.chr1 C 0 C 0 s panPan2.chr7 56708629 21 + 162613886 GAGCTGGGCCTGGAGAGGCCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4211304 21 + 4392246 GAGCTGAGCCTGGAGAGGCCA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748231 21 - 99891981 GAGCTGAGCCTGGAGAGGCCA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678602 21 - 192294377 GAGCCGGGCCCGGAGAGGCCA i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124140374 21 - 127223203 GAGCTGAGCCTGGAGAGGCCA i chlSab2.chr21 I 983 I 145 s saiBol1.JH378167 165446 21 + 13147851 GAGCTGGGCCTGGAGAGGCCA i saiBol1.JH378167 C 0 C 0 e cerAty1.NW_012005081v1 24847 135 - 113584 I e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I a score=19433.000000 s hg38.chr3_KI270784v1_alt 13808 20 + 184404 CCGCGAGGCCTGAGCTGGGC s panTro5.chr1 222295397 20 + 228573443 CCGCGAGGCCTGAGCTGGGC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56708650 20 + 162613886 CTGTGAGGCATGAGCTGGGC i panPan2.chr7 C 0 I 602 s gorGor5.CYUI01015383v1 4211325 20 + 4392246 CCGTGAGGCCTGAGCTGGGC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748252 20 - 99891981 CCGTGAGGCCTGAGCTGGGC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678623 10 - 192294377 CCGTGGGGCC---------- i macFas5.chr3 C 0 C 0 s saiBol1.JH378167 165467 13 + 13147851 CCGTGAG-------TTGGGC i saiBol1.JH378167 C 0 C 0 e cerAty1.NW_012005081v1 24847 135 - 113584 I e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140395 145 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I a score=10581.000000 s hg38.chr3_KI270784v1_alt 13828 18 + 184404 CTGGGGAGCTTGGCTTAG s panTro5.chr1 222295417 18 + 228573443 CTGGGGAGCTTGGCTTAG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4211345 18 + 4392246 CTGGGGAGCTTGGCTTCG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748272 18 - 99891981 CTGGGGAGCTTGGCTTGA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678633 8 - 192294377 ----------CGGCTTCA i macFas5.chr3 C 0 C 0 s saiBol1.JH378167 165480 18 + 13147851 CTAATGAGGTTAGTGTGA i saiBol1.JH378167 C 0 C 0 e cerAty1.NW_012005081v1 24847 135 - 113584 I e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140395 145 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e panPan2.chr7 56708670 602 + 162613886 I a score=30537.000000 s hg38.chr3_KI270784v1_alt 13846 27 + 184404 -GGAAGTTGTGGGCCTACCAGGGCCGCT s panTro5.chr1 222295435 27 + 228573443 -GGAAGTTGTGGGCCTACCAGGGCCGCT i panTro5.chr1 C 0 C 0 s panPan2.chr7 56709272 27 + 162613886 -GGAAGTTTTGGGCCTACAAAGGCCTCC i panPan2.chr7 I 602 C 0 s gorGor5.CYUI01015383v1 4211363 27 + 4392246 -GGAAGTTGTGGGCCTACCAGGGCCACT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748290 27 - 99891981 -AGAAGCGGGGGGCCTACCAAGGCCGCC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678641 27 - 192294377 -GGACGTTTGGGGCCTACAAAGGCCGCG i macFas5.chr3 C 0 I 4 s saiBol1.JH378167 165498 28 + 13147851 GGCAGGACCTGGGCCTGTTGAGGCTGCC i saiBol1.JH378167 C 0 C 0 e cerAty1.NW_012005081v1 24847 135 - 113584 I e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140395 145 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I a score=54739.000000 s hg38.chr3_KI270784v1_alt 13873 35 + 184404 -------------GGGAGCTGGGCAGG-------------------AGCTGAGTCCAAAGACGTTGT s panTro5.chr1 222295462 35 + 228573443 -------------GGGAGCTGGGCAGG-------------------AGCTGAGTCCAAAGATGTTGT i panTro5.chr1 C 0 C 0 s panPan2.chr7 56709299 35 + 162613886 -------------AGGAGCTGGGCAGG-------------------AGCTGAGCCAAAAGAGATTGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4211390 35 + 4392246 -------------GGGAGCTGGGCAGG-------------------AGCTGAGTCCAAAGACGTTGT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748317 35 - 99891981 -------------AGGAGCTGGGCAGG-------------------AGCTGAGTCCAAAGAGGTTGT i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678672 35 - 192294377 -------------GGGAGCCGGCCCGG-------------------AGCCGAGCCAAAGGAGGTTGT i macFas5.chr3 I 4 C 0 s cerAty1.NW_012005081v1 24982 35 - 113584 -------------GGGAGCTGGGCCGG-------------------AGCCGAGTCCAAAGAGGTTGT i cerAty1.NW_012005081v1 I 135 I 3182 s saiBol1.JH378167 165526 67 + 13147851 AGGAGGCAGGTAAAAAAGTTGTTCAGGGAAGACCTCCGTGAGGCAAAGCTGGGCCTGGAGAGGCCAC i saiBol1.JH378167 C 0 C 0 e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140395 145 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I a score=3279.000000 s hg38.chr3_KI270784v1_alt 13908 2 + 184404 TG s panTro5.chr1 222295497 2 + 228573443 TG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56709334 2 + 162613886 TG i panPan2.chr7 C 0 I 14 s gorGor5.CYUI01015383v1 4211425 2 + 4392246 TG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748352 2 - 99891981 TG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678707 2 - 192294377 CG i macFas5.chr3 C 0 C 0 s saiBol1.JH378167 165593 2 + 13147851 TG i saiBol1.JH378167 C 0 I 13 e cerAty1.NW_012005081v1 25017 3182 - 113584 I e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140395 145 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I a score=3177.000000 s hg38.chr3_KI270784v1_alt 13910 9 + 184404 GGACCTGGA s panTro5.chr1 222295499 9 + 228573443 GGACCTGGA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4211427 3 + 4392246 ------GGA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748354 3 - 99891981 ------GGA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678709 3 - 192294377 ------TGA i macFas5.chr3 C 0 C 0 s saiBol1.JH378167 165608 9 + 13147851 GGGCCTGGA i saiBol1.JH378167 I 13 C 0 e cerAty1.NW_012005081v1 25017 3182 - 113584 I e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140395 145 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e panPan2.chr7 56709336 14 + 162613886 I a score=4890.000000 s hg38.chr3_KI270784v1_alt 13919 15 + 184404 GTCGGGCCAGAGTCC s panTro5.chr1 222295508 15 + 228573443 GGTGGGCCAGAGTCC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4211430 11 + 4392246 ----GGCCAGAGTCA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748357 11 - 99891981 ----GGCAGGAGCTG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678712 11 - 192294377 ----GGCCGGGGCTG i macFas5.chr3 C 0 C 0 e cerAty1.NW_012005081v1 25017 3182 - 113584 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140395 145 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e panPan2.chr7 56709336 14 + 162613886 I a score=59549.000000 s hg38.chr3_KI270784v1_alt 13934 40 + 184404 GGCCT-GGAGATGCAGCCGGG---AGGAAGAGCTGGGCCCGGAG s panTro5.chr1 222295523 40 + 228573443 GGCCT-GGAGACGCAGCCGGG---AGGAAGAGCTGGGCCCGGAG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56709350 40 + 162613886 GGCCT-GGAGATTCAGCTAGG---AGGAAGAACTGGGCCTGGAG i panPan2.chr7 I 14 I 75 s gorGor5.CYUI01015383v1 4211441 41 + 4392246 GGCCTCGGAGACTCAGCCGGG---AGGAAGAGCTGGGCCCGGAG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748368 40 - 99891981 AGCCT-GGAGACACAGCCGGG---AGGAAGAGCTGGGCCCGCAC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678723 43 - 192294377 GGCCC-GCGGACGCAGCCGGGAGCAGGAGGAGCTGGGCCTGGAT i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124140540 40 - 127223203 GGCCT-GGAGATGCAGCCGGG---AGGAAGAGCTGAGCCTGGAG i chlSab2.chr21 I 145 I 19 e cerAty1.NW_012005081v1 25017 3182 - 113584 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I a score=21423.000000 s hg38.chr3_KI270784v1_alt 13974 27 + 184404 GGGGCGCCGGGAGGCTGCAAGTGGGTC s panTro5.chr1 222295563 27 + 228573443 AGGACGCCGGGAGGCTGCAAGTGGGTC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4211482 27 + 4392246 AGGATGCCGGGAGGCTGCAAGTGGGTC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748408 27 - 99891981 AGGACGCCGGGAGGCTGCAAGTGGGTC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678766 27 - 192294377 GGGAGGCCGGGAGGCCGCGACTGGGCC i macFas5.chr3 C 0 I 1396 e cerAty1.NW_012005081v1 25017 3182 - 113584 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e panPan2.chr7 56709390 75 + 162613886 I a score=13763.000000 s hg38.chr3_KI270784v1_alt 14001 21 + 184404 T-GAGAGGCCAACTTGAGGAGG s panTro5.chr1 222295590 21 + 228573443 T-GAGAGGCCAACTTGAGGAGG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4211509 22 + 4392246 TGGAGAGGCTGACTTGAGGAGG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748435 22 - 99891981 TGGAGAGGCCAACTTGAGGAGG i nomLeu3.chr17 C 0 I 427 s macFas5.chr3 127680189 21 - 192294377 -TGAGGGGCCGGCCTGAGGAAG i macFas5.chr3 I 1396 C 0 e cerAty1.NW_012005081v1 25017 3182 - 113584 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e panPan2.chr7 56709390 75 + 162613886 I a score=2886.000000 s hg38.chr3_KI270784v1_alt 14022 5 + 184404 CCTGG s panTro5.chr1 222295611 5 + 228573443 CCCGG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4211531 5 + 4392246 CCCGG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748884 5 - 99891981 CTTGG i nomLeu3.chr17 I 427 C 0 s macFas5.chr3 127680210 5 - 192294377 TTCGG i macFas5.chr3 C 0 I 60 e cerAty1.NW_012005081v1 25017 3182 - 113584 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e panPan2.chr7 56709390 75 + 162613886 I a score=2431.000000 s hg38.chr3_KI270784v1_alt 14027 6 + 184404 -CTCTGC s panTro5.chr1 222295616 7 + 228573443 CCTCTGC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4211536 7 + 4392246 CCTCTGC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46748889 6 - 99891981 -GCCTGC i nomLeu3.chr17 C 0 I 165 e cerAty1.NW_012005081v1 25017 3182 - 113584 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e macFas5.chr3 127680215 60 - 192294377 I e panPan2.chr7 56709390 75 + 162613886 I a score=1967.000000 s hg38.chr3_KI270784v1_alt 14033 10 + 184404 CTCCCGCATT s panTro5.chr1 222295623 10 + 228573443 CTCCCGTATG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4211543 10 + 4392246 CTCCCACATG i gorGor5.CYUI01015383v1 C 0 C 0 e cerAty1.NW_012005081v1 25017 3182 - 113584 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e macFas5.chr3 127680215 60 - 192294377 I e nomLeu3.chr17 46748895 165 - 99891981 I e panPan2.chr7 56709390 75 + 162613886 I a score=106464.000000 s hg38.chr3_KI270784v1_alt 14043 301 + 184404 GC------------CCAGCTGTTCCTCCTGGCTGCATCTCCC------------ACCTCCCAGCAAACAAGCTCTTTTGGCTCAGCTCCCGCC-----------TGCGTTTGTAGACCCCGAAGTTTCTGCAACCAAGCTCTTCAGACCCACATCCCTTCTCCCAGTGAC-TGAACAGTCCCAGCTCCGGCTGGAGAAGGGCGTCTGCAGACCCCGCTGTTGCCTCCCAGGGGAGTCTCCAGGCCCAGCTCTCGCCCCACCGCGACC-TCCCAGGCCCAAGTCCCTGCCTACCTCCCAGCAGCCCGAGTGCGATCCTGTTCCTCCCTCACGGTGGCCT s panTro5.chr1 222295633 301 + 228573443 GC------------CCAGCTGTTCCTCCCGGCTGCATCTCCC------------GCCTCCCAGCAAACAAGCTCTTTTGGCTCAGCTCCCGCC-----------GGCCTTTGTAGACCCCGAAGTTTCTGCAAGCAAGCTCTTCAGACCCACATCCCTTCTCCCAGTGAC-TGAACAGTCCCAGCTCCGGCTGGAGAAGGGCGTCTGCAGACCCCGCTGTTGCCTCCCAGGGGAGTCTCCAGGCCCAGCTCTCGCCCCACCGCGACC-TCCCAGGCCCAAGTCCCTGCCTACCTCCCAGCAGCCCGCGTGCGACCCTGCTCCTCCCTCACGGTGGCCT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4211553 307 + 4392246 GCGGCCTCTGCAGGCCAGCTGTTTCTCCTGGCTGCATCTCCC-------------CCTCCCAGCAAACAAGCTTTTTTGGCTCAGCTCCCGCC------------GCGTTTGTAGACCCCGAAGTTTCTGCAACCAAGCTCTTCAGACCCACATCCCGCCTCCCAGTACC-TGAACAGTCCCAGCTCCGGCTGGAGAAAGA-GTCTGTAGGCCCCGCTGTTGCCTCCCAGGGGTGTCTCCA-GCCCAGCTCTTGCCCCATCGTGACC-TCCAAGGCCCAAGT-CCTGCCTGCCTCCCAGCAGCCCGCGTGCGACCCTGCTCCT-CCTCACGGTGGCCT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 53108484 320 + 99891981 GC------------CCAGCTCTTCCTCCTGGCTGAGTCTACAGGCACAACTATTGCCTCAC----AACAACCTCTTTTGGCCCAGCTCCTGCCCAGCTCATGGCAGCCACTGTAGGCCCGAAACTTCCTCAAGTCAAACTCTCCAGGCCCACCTTCTGCTTCCCGGTGGCATGTACAGGCCAAGCTTTGACTTGACAACAGTCTCTGCAGGCCCCGCTCTTGCCTCCCAGGGGCCTCTCCAGGCCCAGGTCTTGCCTCACAGCAGCTGCCCCAGGCTGAGGT-TCTGTCTGCCTGTCAGCAGCCT-TGAAAGGCACAGCTCCTCCCTCACACTGGCCT i nomLeu3.chr17 n 165 n 165 e cerAty1.NW_012005081v1 25017 3182 - 113584 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e macFas5.chr3 127680215 60 - 192294377 I e panPan2.chr7 56709390 75 + 162613886 I a score=37697.000000 s hg38.chr3_KI270784v1_alt 14344 214 + 184404 GTTGAGGCAGGGGGTCACGCTGACCTCTGTCCGCGTGGGAGGGGCCGGTGTGAGGC-AAGGGCTCACACTGACCTCTCTCAGCGTGGGA-GGGGCCGGTGTGAGGCAAGGGGCTCACGCTGACCTCTGTCCGCGTGGGAGGGGCCGGTGTGAGGCAAGGGCTCACACTGACCTCTCTCAGCGTGGGAGGGGCCGGGGTGAGGCAAGGGGCTCACGC s panTro5.chr1 222295934 209 + 228573443 GTTGAGGCAGGGGCTCACGCTGACACCTCTCAGCGTGGGAGGGGCCGGTGTGAGGC-AAGGGCTCACGCTGAC----CTCAGCGTGGGA-GGGGCCCGTGTGAGGCAAGGGGCTCACGCTGACCTCTGTCCGCGTGGGAGGGGCCGGTGTGAGGCAAGGGCTCACAGTGACCTCTCTCAGCATGGGAGGAGCCAGTGTGAGGC-AGGGGCTCACGC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4211860 168 + 4392246 GTTGAGGCAGGGGCTCAGGCTGACCTCTGTCAGCCTGGGAGGGGCCGGTGTGAGGCTAGGGGCTCCCACTGACCTCTGTCAGCGTGGGAGGGGGCCGGTGTGAGGCTAGGGGCTCAGGCTGACCTCTGTCAGCGAGGGAGGGGCCGGTGTGAGGCA------------------------------------------------AGGGGCTCAGGC i gorGor5.CYUI01015383v1 C 0 C 0 e cerAty1.NW_012005081v1 25017 3182 - 113584 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e macFas5.chr3 127680215 60 - 192294377 I e nomLeu3.chr17 53108804 165 + 99891981 I e panPan2.chr7 56709390 75 + 162613886 I a score=40748.000000 s hg38.chr3_KI270784v1_alt 14558 715 + 184404 TGACCTCTGTCCGCGTGGGAGGGGCCGGTGTGAGGC-AAGGGCTCACACTGACCTCTCTCAGCGTGGGAGGGGCCGGGGTGAGGCAAGGGGCTCACGCTGACCTCTGTCCGCGTGGGAGGGGCCGGTGTGAGGCAAGGGCTCACACCGACCTCTCTCAGCGTGGGAGGGGCCGGTGTGAGGCAAGGGGCTCACGCTGACCTCTGTCCGCGTGGGAGGGGCCGGTGTGAGGCAAGGGCTCACACTGACCTCTCTCAGCGTGGGAGGGGCCGGTGTGAGGCAAGGGGCTCACGCTGACCTCTGTCCGCGTGGGAGGGGCCGGTGTGAGACAAGGGGCTCAC----ACCTCTCTCAGCGTGGGAGGGGCCGGTGTGAGGCAA-GGGGCTCGGGCTGACCTCTCTCAGCGTGGGAGGGGCCGGTGTGAGACAAGGGGCTCACGCTGACCTCTCTCAGCGTGGGAGGGGCCGGTGTGAGGCAAGGGGCTCGGGCTGACCTCTCTCAGCGTGGGAGGGGCCGGTGTGAGGCAAGGGGCTCACGCTGACCTCTGTCCGCGTGGGAGGGGCCGGTGTGAGGCAA-GGGCTCACACTGACCTCTCTCAGCGTGGGAGGGGCCGGTGTGAGGCAAGGGGCTCACGCTGACCTCTGTCCGCGTGGGAGGGGCCGGTGTGAGGCAAGGGCTCACACTGACCTCTCTCAGCGTGGGAGGGGCCGGTGTGAGGCAA s gorGor5.CYUI01015383v1 4212028 577 + 4392246 TGACCTCTGTCAGCGTGGGAGGGGCCGGTGTGAGGCTAGGGGCTCCCGCTGACCTCTGTCAGCCTGGGAGGGGCCGGTGTGAGGCAAGGGGCTCAGGCTGACCTCTG------------------------------------------------TCAGTGTGGGAGGGGCCGGTGTGAGGCAAGGGGCTCAGGCTGACCTCTG------------------------------------------------TCAGTGTGGGAGGGGCCGGTGTGAGGCAAGGGGCTCAGGCTGACCTCTGTCAGTGAGGGAGGGGCCGGTGTGAGGCAAGGGGCTCAGGCTGACCTCTCTCAGTGTGGGAGGGGCCGGTGTGAGGCAAAGGGGCTCAGG-TGACCTCTGTCAGCGAGGGTGGGGCCGGTGTGAGGCAAGGGGCTCAGGCTGACCTCTCTCAGTGAGGGAGGGGCCGGTGTGAGGCAAGGGGCTCAGGCTGACCTCTCTCAGTGTGGGAGGGGCCGGTGTGAGGCAAGGGGCTCAGGCTGACCTCTGTCAGCGAGGGTGGGGCCGGTGTGAGGCAAGGGGCTCACACTGACCTCTGTCAGCCTGGGAGGGGCCCGTGTGAGGCAAGGGGCTCACG------------------------------------------------CTGACACCTCTCAGCGTGGGAGGGGCCGGTGTGAGGCAA i gorGor5.CYUI01015383v1 C 0 C 0 e cerAty1.NW_012005081v1 25017 3182 - 113584 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e macFas5.chr3 127680215 60 - 192294377 I e nomLeu3.chr17 53108804 165 + 99891981 I e panPan2.chr7 56709390 75 + 162613886 I e panTro5.chr1 222296143 0 + 228573443 C a score=0.000000 s hg38.chr3_KI270784v1_alt 15273 244 + 184404 GGAGCTCGGGCTGACCTCTGTCCGCGTGGGAGGGGCCGGTGTGAGGCAAGGGGCTTGGGCTGACCTCTCTCAGCGTGGGAGGGGCCGGTGTGAGACAAGGGGCACGCTGACCTCTCTCAGCATGGGAGGGGCCGGTGTGAGACAAGGGGCTCGGGCTGACCTCTGTCCGCGTGGGAGGGGCCGGTGTGAGGCAAGGGGCTCACGCTGACCTCTGTCCGCGTGGGAGGGGCCGGTGTGAGGCAAG e cerAty1.NW_012005081v1 25017 3182 - 113584 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e macFas5.chr3 127680215 60 - 192294377 I e nomLeu3.chr17 53108804 165 + 99891981 I e panPan2.chr7 56709390 75 + 162613886 I e gorGor5.CYUI01015383v1 4212605 0 + 4392246 C e panTro5.chr1 222296143 0 + 228573443 C a score=11406.000000 s hg38.chr3_KI270784v1_alt 15517 345 + 184404 GGCTCACACTGACCTCTCTCAGCGTGGGAGGGGCCGGTGTGAGACAAGGGGCTCACGCTGACCTCTGTCCACGTGGGAGGGGCCGGGGTGAGGCAAGGGCTCACACTGACCTCTCTCAGCGTGGGAGGGGCCGGTGTGAGGCAAGGGGCTCACGCTGACCTCTGTCCGCGTGGGAGGGGCCGGTGTGAGGCAAGGGCTCACACTGACCTCTCTCAGCGTGGGAGGGGCCGGTGTGAGGCAAGGGGCTCACGCTGACCTCTCTCA-----------------------AGCGTGGGAGGAGCCGGTGTGAGGCAAGGGCTCACACTGACCTCTCTCAGCGTGGAGTAGCCAGTGTGAGGCAGCGTCACG s gorGor5.CYUI01015383v1 4212605 228 + 4392246 GGCTCACGCTGACCTCTCTCAGCGTGGGAGGGGCCGGTGTGAGGCAAGGGGCTCATG------------------------------------------------CTGACCTCTCTCAGCGTGGGAGGGGCCGGTGTGAGGCAAGGGGCTCACGCTGACCTCTG------------------------------------------------TCAGAGTGGGAGGGACCCGTGTGAGGCAAGGGGCTCACGCTGACACCTCTCAGCTGAGGGGCTCAGTGCCTCTCCAGCGTGGGAGGAGCCAGTGTGTGGCAGGGGCTCATGC-------------------------------------------- i gorGor5.CYUI01015383v1 C 0 C 0 e cerAty1.NW_012005081v1 25017 3182 - 113584 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e macFas5.chr3 127680215 60 - 192294377 I e nomLeu3.chr17 53108804 165 + 99891981 I e panPan2.chr7 56709390 75 + 162613886 I e panTro5.chr1 222296143 0 + 228573443 C a score=2791.000000 s hg38.chr3_KI270784v1_alt 15862 11 + 184404 CTCTGTGCAGG s panTro5.chr1 222296143 11 + 228573443 CTCTGGGCAGG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4212833 11 + 4392246 CTCTGGGCAGG i gorGor5.CYUI01015383v1 C 0 C 0 e cerAty1.NW_012005081v1 25017 3182 - 113584 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e macFas5.chr3 127680215 60 - 192294377 I e nomLeu3.chr17 53108804 165 + 99891981 I e panPan2.chr7 56709390 75 + 162613886 I a score=3721.000000 s hg38.chr3_KI270784v1_alt 15873 10 + 184404 GT-CCAGAGGC s panTro5.chr1 222296154 11 + 228573443 GTGCCAGAGGC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4212844 11 + 4392246 GTACCAGAGGC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749060 10 - 99891981 GC-CCAGAGGC i nomLeu3.chr17 I 165 C 0 e cerAty1.NW_012005081v1 25017 3182 - 113584 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e macFas5.chr3 127680215 60 - 192294377 I e panPan2.chr7 56709390 75 + 162613886 I a score=966.000000 s hg38.chr3_KI270784v1_alt 15883 12 + 184404 ATGAGTTGG-CAT s panTro5.chr1 222296165 13 + 228573443 ATGAGTTGGGCAT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4212855 8 + 4392246 ATGGG-----CAT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749070 12 - 99891981 AGGAGCCTG-GAC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127680275 13 - 192294377 ATGAGCCGGGCCT i macFas5.chr3 I 60 C 0 e cerAty1.NW_012005081v1 25017 3182 - 113584 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e panPan2.chr7 56709390 75 + 162613886 I a score=26636.000000 s hg38.chr3_KI270784v1_alt 15895 30 + 184404 CAA-CAGGCCACCGTGAGGGAGGAGCTGGGC s panTro5.chr1 222296178 30 + 228573443 CAA-CAGGCCACCATGAGGGAGGAGCTGGAC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4212863 30 + 4392246 CAA-CAGGCCACCGTGAGGGAGGAGCTGGGC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749082 31 - 99891981 CAAGGAGGCCACGGTGAGGCAAGAGGTGGGC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127680288 30 - 192294377 AAC-GAGGCCACTGGGAGGCAGGAGCGGGGC i macFas5.chr3 C 0 C 0 s calJac3.chr2 1420401 30 + 204313951 CAA-AAGACCACCGTGAGAGAGGAGATGGGC i calJac3.chr2 N 0 I 30 e cerAty1.NW_012005081v1 25017 3182 - 113584 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e panPan2.chr7 56709390 75 + 162613886 I a score=1432.000000 s hg38.chr3_KI270784v1_alt 15925 9 + 184404 -GCACGCGGG- s panTro5.chr1 222296208 10 + 228573443 CGCACGCGGG- i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4212893 10 + 4392246 TGCACGCGGG- i gorGor5.CYUI01015383v1 C 0 C 0 s macFas5.chr3 127680318 9 - 192294377 --CCGGCGGAG i macFas5.chr3 C 0 C 0 e calJac3.chr2 1420431 30 + 204313951 I e cerAty1.NW_012005081v1 25017 3182 - 113584 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e nomLeu3.chr17 46749113 0 - 99891981 C e panPan2.chr7 56709390 75 + 162613886 I a score=19786.000000 s hg38.chr3_KI270784v1_alt 15934 25 + 184404 CTGCTGGGAGGC---------AGGCAGGGACTTG s panTro5.chr1 222296218 25 + 228573443 CTGCTGGGAGGC---------AGGCAGGGACTTG i panTro5.chr1 C 0 I 1 s gorGor5.CYUI01015383v1 4212903 25 + 4392246 CTGCTGGGAGGC---------AGGCAGGGACTTG i gorGor5.CYUI01015383v1 C 0 I 1 s nomLeu3.chr17 46749113 31 - 99891981 ---CTGGAGGGCCCACTGTTGAGGTAGAGGCTGG i nomLeu3.chr17 C 0 I 1 s macFas5.chr3 127680327 24 - 192294377 CTGCCGAAAGGC---------AGG-AGGAGCTCT i macFas5.chr3 C 0 I 2 s cerAty1.NW_012005081v1 28199 25 - 113584 CTGCTGGGAGGC---------AGGCAGGAACTTG i cerAty1.NW_012005081v1 I 3182 I 96 e calJac3.chr2 1420431 30 + 204313951 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e panPan2.chr7 56709390 75 + 162613886 I a score=2925.000000 s hg38.chr3_KI270784v1_alt 15959 6 + 184404 CCCCGG s panTro5.chr1 222296244 6 + 228573443 CCCCGG i panTro5.chr1 I 1 C 0 s gorGor5.CYUI01015383v1 4212929 6 + 4392246 CCCCGG i gorGor5.CYUI01015383v1 I 1 C 0 s nomLeu3.chr17 46749145 6 - 99891981 CCTCTA i nomLeu3.chr17 I 1 C 0 s macFas5.chr3 127680353 6 - 192294377 CCTGGG i macFas5.chr3 I 2 C 0 e calJac3.chr2 1420431 30 + 204313951 I e cerAty1.NW_012005081v1 28224 96 - 113584 I e saiBol1.JH378167 165617 0 + 13147851 C e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e panPan2.chr7 56709390 75 + 162613886 I a score=7644.000000 s hg38.chr3_KI270784v1_alt 15965 15 + 184404 GAGGCCGCCGTGGGT s panTro5.chr1 222296250 15 + 228573443 GAGGCCGCTGTGGGG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4212935 15 + 4392246 GAGGCCGCCGTGGGG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749151 14 - 99891981 GAGGCCGCCAACAT- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127680359 14 - 192294377 GAGGCCGCAGTCAG- i macFas5.chr3 C 0 C 0 s saiBol1.JH378167 165617 15 + 13147851 GAGGCCACTGTCACT i saiBol1.JH378167 C 0 C 0 e calJac3.chr2 1420431 30 + 204313951 I e cerAty1.NW_012005081v1 28224 96 - 113584 I e colAng1.NW_012116633v1 739130 419 + 1536524 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8928837 438 - 10413719 I e panPan2.chr7 56709390 75 + 162613886 I a score=92846.000000 s hg38.chr3_KI270784v1_alt 15980 35 + 184404 GCAAGAGCTTGGCCTGGAGAGGCCCCTGGGAGGCA s panTro5.chr1 222296265 35 + 228573443 GCAAGAGCTGGGCCTGGAGAGGCCCCTGGGAGGCA i panTro5.chr1 C 0 C 0 s panPan2.chr7 56709465 35 + 162613886 GCAGGAGCTTGGCCTAGAGAGGCCACTGGGAGGCA i panPan2.chr7 I 75 I 55 s gorGor5.CYUI01015383v1 4212950 35 + 4392246 GCAAGAGCTGGGCCTGGAGAGGCCCCTGGGAGGCA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749165 35 - 99891981 GCAGGGGCTGGGCCTGGAGAGGCCCCTAGGAGGCA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127680373 35 - 192294377 GCGAGAGCTGGGCGTGGAGAGTCCGCTGGGAGGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929275 35 - 10413719 GCAAGAGTTGGGCCTGGAGAGGGTGCTAGGAGGCA i macNem1.NW_012013022v1 I 438 C 0 s colAng1.NW_012116633v1 739549 35 + 1536524 GCAAGAGTTGGGCCTGGAGAGGGTGCTAAGAGGCA i colAng1.NW_012116633v1 I 419 C 0 s saiBol1.JH378167 165632 34 + 13147851 -CAGGAGCTGGGCCTGGAGAGGCCACAGGGAGGCA i saiBol1.JH378167 C 0 C 0 e calJac3.chr2 1420431 30 + 204313951 I e cerAty1.NW_012005081v1 28224 96 - 113584 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I a score=18804.000000 s hg38.chr3_KI270784v1_alt 16015 13 + 184404 AGG-CGGGGCCTGC s panTro5.chr1 222296300 14 + 228573443 AGGACGGGGCCTGC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4212985 13 + 4392246 AGA-GTGGGCCTGC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749200 14 - 99891981 AGAGGGGGGCCTGC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127680408 14 - 192294377 GAGGCTGGGCCTGT i macFas5.chr3 C 0 I 630 s macNem1.NW_012013022v1 8929310 14 - 10413719 AGAGCGGGGCCTGC i macNem1.NW_012013022v1 C 0 C 0 s colAng1.NW_012116633v1 739584 14 + 1536524 AGAGCGGGGCCTGC i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 165666 14 + 13147851 AAAGCTGGGCCTGG i saiBol1.JH378167 C 0 C 0 e calJac3.chr2 1420431 30 + 204313951 I e cerAty1.NW_012005081v1 28224 96 - 113584 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e panPan2.chr7 56709500 55 + 162613886 I a score=81511.000000 s hg38.chr3_KI270784v1_alt 16028 55 + 184404 AGAGGCTGTTCTCCAACCA---GTGCTAGAACTGTACAGGCCACCAGGAGGCAGGAG-G s panTro5.chr1 222296314 55 + 228573443 AGAGGCTGTTCTCCAACCA---GTGCTGGGCCTGTACAGGCTACCGGGAGGCAGGAG-G i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4212998 55 + 4392246 AGAGGCCACTCTCCAACCA---TTGCTGGGCCCGTACAGGCCACCGGGCGGCAGGAA-T i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749214 55 - 99891981 AGAGGCTGTTCATCAGCAA---GAGCAGGGCCTCTACAGGCCACCGGGAGGCAGGAG-G i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127681052 59 - 192294377 AAAGGCCGTTTCCCAGACGAATGAGCCGGGCCTAACGAGGCCACTGGGAGGCAGGAGCG i macFas5.chr3 I 630 C 0 s macNem1.NW_012013022v1 8929324 55 - 10413719 AGAGGCTGTTCTCAAGCCA---GAGTTGGGTCTGTACAGGCCACTGCGAGGCAGAAG-G i macNem1.NW_012013022v1 C 0 C 0 s colAng1.NW_012116633v1 739598 55 + 1536524 AGAGGCTGTTCTCAAGCCA---GAGTTGGGTCTGTACAGGCCACCGCGAGGCAGAAG-G i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 165680 55 + 13147851 AGAGGCCACTGTCACTCAG---GAGCTGGGCCTGTCCAAGCCACCGGGAGGCTGAAA-G i saiBol1.JH378167 C 0 C 0 e calJac3.chr2 1420431 30 + 204313951 I e cerAty1.NW_012005081v1 28224 96 - 113584 I e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e panPan2.chr7 56709500 55 + 162613886 I a score=19085.000000 s hg38.chr3_KI270784v1_alt 16083 15 + 184404 TGGGCCCTCAGAGCT s panTro5.chr1 222296369 15 + 228573443 TGGGCCCTCAGAGCT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213053 15 + 4392246 TAGGCCCGAAGAACT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749269 15 - 99891981 TGGGCCTGAAGAGCT i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127681111 15 - 192294377 GGGGCCGGCGGAGCT i macFas5.chr3 C 0 I 271 s macNem1.NW_012013022v1 8929379 15 - 10413719 TGGGCCTAAAGAGCT i macNem1.NW_012013022v1 C 0 C 0 s colAng1.NW_012116633v1 739653 15 + 1536524 TGGGCCTAAAGAGCT i colAng1.NW_012116633v1 C 0 C 0 e calJac3.chr2 1420431 30 + 204313951 I e cerAty1.NW_012005081v1 28224 96 - 113584 I e saiBol1.JH378167 165735 0 + 13147851 C e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e panPan2.chr7 56709500 55 + 162613886 I a score=80284.000000 s hg38.chr3_KI270784v1_alt 16098 59 + 184404 TGGCTGGAGAAAGTTCGGGGC----CTACAAAGGCGG----TTGGGAGCTGGGCAGGAGTTGAGCCA s panTro5.chr1 222296384 59 + 228573443 TGGCTGGAGAAAGTTCAGGGC----CTAGAAAGGCGG----TTGGGAGCTGGGCAGGAGTTGAGCCA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213068 58 + 4392246 TGGCTGGAGAAAGTTC-GGGC----CTACAAAGGCGG----TTGGGAGCTGGGCAGGAGTTGAGCCA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749284 63 - 99891981 TGGCAGGAGAAAGTTAGGGGCATGTATACAAAGGCCG----GTGGGAGCTGGGCAGGAGATGAGCCA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127681397 63 - 192294377 CGGCTTCAGGACGTTTGGGGC----CTACAAAGGCCGCGGAGCGGGAGCTGGGCCGGAGCCGAGCCA i macFas5.chr3 I 271 C 0 s macNem1.NW_012013022v1 8929394 59 - 10413719 TGACTTGAGGAAGTTTTGGGC----CTACAAAGGCTG----GCAGGAGCTGGGCAGGAGCTGAGCCA i macNem1.NW_012013022v1 C 0 C 0 s colAng1.NW_012116633v1 739668 59 + 1536524 TGACTTGAGGAAGTTTTGGGC----CTACAAAGGCTG----GCAGGAGCTGGGCAGGAGCTGAGCCA i colAng1.NW_012116633v1 C 0 C 0 e calJac3.chr2 1420431 30 + 204313951 I e cerAty1.NW_012005081v1 28224 96 - 113584 I e saiBol1.JH378167 165735 0 + 13147851 C e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e panPan2.chr7 56709500 55 + 162613886 I a score=11988.000000 s hg38.chr3_KI270784v1_alt 16157 25 + 184404 AAAGAGCTTGCTTACTTGCTGGGAG s panTro5.chr1 222296443 25 + 228573443 AAAGAGCTTGCTTACTTGCTGGGAG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213126 25 + 4392246 AAAGAGCTTGCTTACTTGCTGGGAG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749347 25 - 99891981 AAAGAGGTTGCTTGCTGGGTGGCAG i nomLeu3.chr17 C 0 I 165 s macFas5.chr3 127681460 17 - 192294377 AAGGAGGTTGT--------CGTGAG i macFas5.chr3 C 0 C 0 e calJac3.chr2 1420431 30 + 204313951 I e cerAty1.NW_012005081v1 28224 96 - 113584 I e saiBol1.JH378167 165735 0 + 13147851 C e colAng1.NW_012116633v1 739727 0 + 1536524 C e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8929453 0 - 10413719 C e panPan2.chr7 56709500 55 + 162613886 I a score=2411.000000 s hg38.chr3_KI270784v1_alt 16182 6 + 184404 GCAGGG s panTro5.chr1 222296468 6 + 228573443 GCCGGG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213151 5 + 4392246 GCA-GG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749537 6 - 99891981 GCTGGG i nomLeu3.chr17 I 165 C 0 s macFas5.chr3 127681477 6 - 192294377 GCAGGG i macFas5.chr3 C 0 I 603 e calJac3.chr2 1420431 30 + 204313951 I e cerAty1.NW_012005081v1 28224 96 - 113584 I e saiBol1.JH378167 165735 0 + 13147851 C e colAng1.NW_012116633v1 739727 0 + 1536524 C e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8929453 0 - 10413719 C e panPan2.chr7 56709500 55 + 162613886 I a score=49196.000000 s hg38.chr3_KI270784v1_alt 16188 93 + 184404 CCGGGAGAGCCCGACTTCAGGACAACTTGGGCCTGCGGCAGTCGCCGGGAGGCCCAACCTTGGCGTGGAGGAGCCCACCGACCGGAGACCATT s panTro5.chr1 222296474 93 + 228573443 CCGGGAGATGCCGACTTCAGGACAACTTGGGCCTGCAGCGGTCGCCGGGAGGCCCAAGCTTGGCGTGGAGGAGCCCATCGACCAGAGACCATC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213156 93 + 4392246 CCGGGAGATGCCGACTTCAGGACAACTTGGGCCTGCAGAGGTCGCCGGGAGGCCCAAGCTTGGCGTGGAGAAGCCCACCGACCGGAGACCATT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749543 91 - 99891981 CCTGGAGAGGCCAACTTCAGGATGACTTGGGCCTGCAGAGGCCGCCGGGAGGCCCAAGTTGGGC--CAAGGAGCCAACAGACCGGAGGCCGTC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127682086 79 - 192294377 CCGGGAG----------CAGGAGGAGCTGGGCCTGGATGGGAGGCCGGGAGGCCGCGACTGGGCCTGGAGGGGCC----GGCCTGAGGAAGTT i macFas5.chr3 I 603 C 0 e calJac3.chr2 1420431 30 + 204313951 I e cerAty1.NW_012005081v1 28224 96 - 113584 I e saiBol1.JH378167 165735 0 + 13147851 C e colAng1.NW_012116633v1 739727 0 + 1536524 C e rheMac8.chr3 55089703 35 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8929453 0 - 10413719 C e panPan2.chr7 56709500 55 + 162613886 I a score=4341.000000 s hg38.chr3_KI270784v1_alt 16281 4 + 184404 TGGG s panTro5.chr1 222296567 4 + 228573443 TGGG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213249 4 + 4392246 TGGG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749634 4 - 99891981 GGGG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55089738 4 + 185818997 TGGG i rheMac8.chr3 I 35 C 0 s macFas5.chr3 127682165 4 - 192294377 CGGG i macFas5.chr3 C 0 C 0 e calJac3.chr2 1420431 30 + 204313951 I e cerAty1.NW_012005081v1 28224 96 - 113584 I e saiBol1.JH378167 165735 0 + 13147851 C e colAng1.NW_012116633v1 739727 0 + 1536524 C e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8929453 0 - 10413719 C e panPan2.chr7 56709500 55 + 162613886 I a score=4950.000000 s hg38.chr3_KI270784v1_alt 16285 3 + 184404 GCC s panTro5.chr1 222296571 3 + 228573443 GCC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213253 3 + 4392246 GCC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749638 3 - 99891981 GCC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55089742 3 + 185818997 GCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127682169 3 - 192294377 GCC i macFas5.chr3 C 0 I 897 s calJac3.chr2 1420461 3 + 204313951 GCC i calJac3.chr2 I 30 C 0 e cerAty1.NW_012005081v1 28224 96 - 113584 I e saiBol1.JH378167 165735 0 + 13147851 C e colAng1.NW_012116633v1 739727 0 + 1536524 C e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8929453 0 - 10413719 C e panPan2.chr7 56709500 55 + 162613886 I a score=40667.000000 s hg38.chr3_KI270784v1_alt 16288 26 + 184404 TGGAGATGCCATCGGAGGGCAGGAGC s panTro5.chr1 222296574 26 + 228573443 TGGAGATGCCATCGGAGGGCAGGAGC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213256 26 + 4392246 TGCAGGTGCCATCGGAGGGCAGGAGC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749641 26 - 99891981 TGGAGATGCCGTCGGAGGGCAGGAGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55089745 26 + 185818997 TGGAGACGCCGTCGGAGGGCAGGAGC i rheMac8.chr3 C 0 I 181 s macFas5.chr3 127683069 26 - 192294377 TGGAGACGCCGTCGCAGGGCAGGAGC i macFas5.chr3 I 897 C 0 s calJac3.chr2 1420464 26 + 204313951 TGAAGAGGCCACGGCGAGGCAGGAGC i calJac3.chr2 C 0 C 0 e cerAty1.NW_012005081v1 28224 96 - 113584 I e saiBol1.JH378167 165735 0 + 13147851 C e colAng1.NW_012116633v1 739727 0 + 1536524 C e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8929453 0 - 10413719 C e panPan2.chr7 56709500 55 + 162613886 I a score=24874.000000 s hg38.chr3_KI270784v1_alt 16314 32 + 184404 TCATCCTGGAGAGGCCACCGTGAGGCCTGACC------ s panTro5.chr1 222296600 32 + 228573443 TCATCCTGGAGAGGCCACCGTGAGGCCTGACC------ i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213282 32 + 4392246 TCATCCTGGAGAGGCCACCGTGAGGCCTGACC------ i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749667 32 - 99891981 TGAGCCTGGAGAGGCCACCGTGAGGCTTGAGC------ i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127683095 32 - 192294377 CGGGCCCGGAGAGGCCACCGTGGGGCCCGGCT------ i macFas5.chr3 C 0 C 0 s calJac3.chr2 1420490 38 + 204313951 TCGGCTAAAAGAGGCTGCCGTGAAACAGAAGCTGCACC i calJac3.chr2 C 0 I 26 e cerAty1.NW_012005081v1 28224 96 - 113584 I e saiBol1.JH378167 165735 0 + 13147851 C e colAng1.NW_012116633v1 739727 0 + 1536524 C e rheMac8.chr3 55089771 181 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8929453 0 - 10413719 C e panPan2.chr7 56709500 55 + 162613886 I a score=71356.000000 s hg38.chr3_KI270784v1_alt 16346 74 + 184404 TGGGCCTGGGGAGCTTGGCTTGAGGAAGCTGTGGGCCGACCAAGGCCGC----CAGGAGATGGGTAGGCACTGAGTCC s panTro5.chr1 222296632 74 + 228573443 TGGGCCTGGGGAGCTTGGCTTGAGGAAGCTGTGGGCCGACCAAGGCCGC----CAGGAGATGGGTAGGCACTGAGTCC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213314 70 + 4392246 TGGGCCTGGGGAGC-TGGCTTGAGGAAGCTGTGGGC---CCAAGGCCGC----CAGGAGATGGGTAGGCACTGAGTCC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749699 74 - 99891981 TGGGCCTGGGGAGCTTGGCTTGAGGAAGCTGTGGGCCTACCAAGGCCGC----CAGGAGCTGGGCAGGAGCTGAGTCC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127683127 65 - 192294377 -------------CCCGGCTTCAGGACGTTTGGGGCCTACAAAGGCCGCGGAGCGGGAGCTGGGCCGGAGCCGAGCCA i macFas5.chr3 C 0 C 0 s calJac3.chr2 1420554 63 + 204313951 TGGGCCTGGAAAGCCCGACCTGAGGAAGGCTGGGGCCTA---------------CGGAGCTGGGCAGGAGTGGGGCCA i calJac3.chr2 I 26 C 0 s saiBol1.JH378167 165735 74 + 13147851 TGGGCTTGGAGAGCTTGACTTGAGGCAGTTTCGGGCCTAAAAATGCCAC----CAGGAGCTAGGCAGGAGCTGAGATG i saiBol1.JH378167 C 0 C 0 e cerAty1.NW_012005081v1 28224 96 - 113584 I e colAng1.NW_012116633v1 739727 0 + 1536524 C e rheMac8.chr3 55089771 181 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e macNem1.NW_012013022v1 8929453 0 - 10413719 C e panPan2.chr7 56709500 55 + 162613886 I a score=170773.000000 s hg38.chr3_KI270784v1_alt 16420 88 + 184404 AAAGAGGTTGTTGAGAGGCAGGAATCGGGCCTGGAGACCCAACC---AGGAAGAAGAGCTGGGCCCGGAGAGAACGCCCGGAGGGTGCAAG s panTro5.chr1 222296706 88 + 228573443 AAAGAGGTTGTTGAGAGGCAGGAGTCGGGCCTGGAGACGCAACC---AGGAAGAAGAGCTGGGCCCGGAGAGGACGCCCGGAGGGTGCAAG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213384 87 + 4392246 AAAGAGGTTGTTGAGAGGCAGGAGTCGGGCCTGGAGAC-CAGCC---AGGAAGAGGAGCTTGGCCCGGAGAGGACGCCCGGAGGGTGCAAG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749773 88 - 99891981 AAAGAGGTTGTTGGGAGGCAGGAGTTGGGCCTGGAGACGCAGCC---AGGAGGAAGAGCTGGGCCCGCACAGGACGCTGGGAGGCTGCAAG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127683192 91 - 192294377 AAGGAGGTTGTCGTGAGGCAGGGGCTGGGCCCGCGGACGCAGCCGGGAGCAGGAGGAGCTGGGCCTGGACGGGAGGCCGGGAGGCCGCGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929453 88 - 10413719 TAAAAGGTTGTTGTGAAGCAGGAGTTGGGCTTGTAGATACAGCC---AGAAGGAAGAGCTAGGCCTGGAGAGGACGCCAGGAGGCAGCAAC i macNem1.NW_012013022v1 C 0 C 0 s colAng1.NW_012116633v1 739727 88 + 1536524 TAAAAGGTTGTTGTGAGGCAGGAGTTGGGCTTGTAGACACAGCC---AGGAGGAAGAGCTAGGCCTGGAGAGGACGCCGGGAGGCAGCAAC i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1420617 87 + 204313951 AACGTTGTCGTTGTGAGGCAGGAGCTGGGTCTGTAGATGCAGCC---GGGAGGAAGAGCTGGGCCCGGAGG-ATTGCCGGGAGGTAGCACC i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 165809 76 + 13147851 AAAGAGGTTGTTGTGAGGCACATGCTGGGCCTCTAGGCACAGCT---GGAAGGAAGATCCGGGGCTCGAGA---CGCCG---------ACT i saiBol1.JH378167 C 0 C 0 e cerAty1.NW_012005081v1 28224 96 - 113584 I e rheMac8.chr3 55089771 181 + 185818997 I e chlSab2.chr21 124140580 19 - 127223203 I e panPan2.chr7 56709500 55 + 162613886 I a score=7825.000000 s hg38.chr3_KI270784v1_alt 16508 5 + 184404 TGGGT s panTro5.chr1 222296794 5 + 228573443 TGGGT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213471 4 + 4392246 T-GGT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749861 5 - 99891981 TGGGT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55089952 5 + 185818997 TGGGC i rheMac8.chr3 I 181 C 0 s macFas5.chr3 127683283 5 - 192294377 TGGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929541 5 - 10413719 TGGGC i macNem1.NW_012013022v1 C 0 C 0 s colAng1.NW_012116633v1 739815 5 + 1536524 TGGGC i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1420704 5 + 204313951 TGCGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 165885 3 + 13147851 TGT-- i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 281252 5 + 373793 TGGGC i cebCap1.NW_016108107v1 N 0 C 0 e cerAty1.NW_012005081v1 28224 96 - 113584 I e chlSab2.chr21 124140580 19 - 127223203 I e panPan2.chr7 56709500 55 + 162613886 I a score=118557.000000 s hg38.chr3_KI270784v1_alt 16513 29 + 184404 CTGGAGAGGCTGACTTGA--------GGAGGTTCTGG s panTro5.chr1 222296799 29 + 228573443 CTGGAGAGGCCGACTTGA--------GGAGGTTCTGG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213475 28 + 4392246 CTGGAGAGGCCGACTTGA--------GGAGGTTCT-C i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749866 29 - 99891981 CTGGAGAGGCCGACTTGA--------GGAGGTTCTGG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55089957 29 + 185818997 CTGGAGGGGCCGGCCTGA--------GGAAGTTCGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127683288 29 - 192294377 CTGGAGGGGCCGGCCTGA--------GGAAGTTCGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929546 29 - 10413719 CTGGAGAGGCCGACTTGA--------GGAAGTTTTGG i macNem1.NW_012013022v1 C 0 I 195 s cerAty1.NW_012005081v1 28320 29 - 113584 CTGGAGAGGCCCACTTGA--------GGAGGTTCTGG i cerAty1.NW_012005081v1 I 96 C 0 s chlSab2.chr21 124140599 29 - 127223203 CTGGAGAGGCCCACTTGA--------GGAAGTTCTGG i chlSab2.chr21 I 19 C 0 s colAng1.NW_012116633v1 739820 29 + 1536524 CTGGAGAGGCTGACTTGA--------GGAAGTTTTGG i colAng1.NW_012116633v1 C 0 I 219 s calJac3.chr2 1420709 34 + 204313951 CTGGAGGGGC---CATGAAAGCAGAAGCACGATCTGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 165888 11 + 13147851 --------------------------GGATACTTTGG i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 281257 29 + 373793 CTAGAGAGGCTGACTTGA--------GGAAGTTTTGT i cebCap1.NW_016108107v1 C 0 C 0 e panPan2.chr7 56709500 55 + 162613886 I a score=37479.000000 s hg38.chr3_KI270784v1_alt 16542 9 + 184404 GCCCGGAGA s panTro5.chr1 222296828 9 + 228573443 GCCCGGAGA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213503 9 + 4392246 GCCCAGAGA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749895 9 - 99891981 GCCCAGGGA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55089986 9 + 185818997 GCCTGGAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127683317 9 - 192294377 ACCTGGAGA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 28349 9 - 113584 GCCTGGAGA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124140628 9 - 127223203 GCCTGGAGA i chlSab2.chr21 C 0 I 141 s calJac3.chr2 1420743 9 + 204313951 GTCCAGAGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 165899 9 + 13147851 GCCCGGAGA i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 281286 9 + 373793 GCCTGGAGA i cebCap1.NW_016108107v1 C 0 C 0 e colAng1.NW_012116633v1 739849 219 + 1536524 I e macNem1.NW_012013022v1 8929575 195 - 10413719 I e panPan2.chr7 56709500 55 + 162613886 I a score=-8950.000000 s hg38.chr3_KI270784v1_alt 16551 5 + 184404 G---------------------------------------------------------------------------GCCG s panTro5.chr1 222296837 5 + 228573443 G---------------------------------------------------------------------------GCCG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213512 5 + 4392246 G---------------------------------------------------------------------------GCCG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749904 5 - 99891981 G---------------------------------------------------------------------------GCCA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55089995 5 + 185818997 G---------------------------------------------------------------------------GCCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127683326 5 - 192294377 G---------------------------------------------------------------------------GCCG i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 28358 5 - 113584 T---------------------------------------------------------------------------GCTG i cerAty1.NW_012005081v1 C 0 C 0 s calJac3.chr2 1420752 80 + 204313951 GACCTCTAAAGGTCTTCGAGAAGTAAAGGGTGAGTGGTGCAGAGGCCTTTTTCATGCTAAAGCTGAGCCTTTACATGCCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 165908 5 + 13147851 G---------------------------------------------------------------------------GCCA i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 281295 5 + 373793 C---------------------------------------------------------------------------GCCG i cebCap1.NW_016108107v1 C 0 I 202 e colAng1.NW_012116633v1 739849 219 + 1536524 I e chlSab2.chr21 124140637 141 - 127223203 I e macNem1.NW_012013022v1 8929575 195 - 10413719 I e panPan2.chr7 56709500 55 + 162613886 I a score=42869.000000 s hg38.chr3_KI270784v1_alt 16556 21 + 184404 CCGGAAGGGAAAAACTGGGCC s panTro5.chr1 222296842 21 + 228573443 CCGGAAGGGAAAAACTGGGCC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213517 21 + 4392246 CCGGAAGGGAAAAACTGGGCC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749909 21 - 99891981 CCGGAAGGGAGAAACTGGGCC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55090000 21 + 185818997 CCAAAAGGCAAAGGCTGGGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127683331 21 - 192294377 CTAAAAGGCAAAGGCTAGGCC i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 28363 21 - 113584 CCAAAAGGCAAAAGCTGAGCC i cerAty1.NW_012005081v1 C 0 I 115 s calJac3.chr2 1420832 21 + 204313951 CTGGGAGAGAGAAGCTGGGTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 165913 21 + 13147851 CCCAGAGGCAGGAGCGGGAAC i saiBol1.JH378167 C 0 C 0 e cebCap1.NW_016108107v1 281300 202 + 373793 I e colAng1.NW_012116633v1 739849 219 + 1536524 I e chlSab2.chr21 124140637 141 - 127223203 I e macNem1.NW_012013022v1 8929575 195 - 10413719 I e panPan2.chr7 56709500 55 + 162613886 I a score=19929.000000 s hg38.chr3_KI270784v1_alt 16577 9 + 184404 TGGAAAGGC s panTro5.chr1 222296863 9 + 228573443 TGGAAAGGC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213538 9 + 4392246 TGGAAAGGC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749930 9 - 99891981 TGGAAAGGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55090021 9 + 185818997 TGGAAAGGC i rheMac8.chr3 C 0 I 140 s macFas5.chr3 127683352 9 - 192294377 TGGAAAGGC i macFas5.chr3 C 0 C 0 s calJac3.chr2 1420853 9 + 204313951 TGGAAAGGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 165934 9 + 13147851 TACAGAGGC i saiBol1.JH378167 C 0 C 0 e cebCap1.NW_016108107v1 281300 202 + 373793 I e cerAty1.NW_012005081v1 28384 115 - 113584 I e colAng1.NW_012116633v1 739849 219 + 1536524 I e chlSab2.chr21 124140637 141 - 127223203 I e macNem1.NW_012013022v1 8929575 195 - 10413719 I e panPan2.chr7 56709500 55 + 162613886 I a score=1832.000000 s hg38.chr3_KI270784v1_alt 16586 6 + 184404 CGTT----GT s panTro5.chr1 222296872 6 + 228573443 CGTT----GT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213547 6 + 4392246 TGTT----GT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749939 6 - 99891981 CGTT----GT i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127683361 10 - 192294377 CGTTCAACAT i macFas5.chr3 C 0 C 0 s calJac3.chr2 1420862 6 + 204313951 TGAC----TT i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 165943 6 + 13147851 CACT----AT i saiBol1.JH378167 C 0 C 0 e cebCap1.NW_016108107v1 281300 202 + 373793 I e cerAty1.NW_012005081v1 28384 115 - 113584 I e colAng1.NW_012116633v1 739849 219 + 1536524 I e rheMac8.chr3 55090030 140 + 185818997 I e chlSab2.chr21 124140637 141 - 127223203 I e macNem1.NW_012013022v1 8929575 195 - 10413719 I e panPan2.chr7 56709500 55 + 162613886 I a score=4467.000000 s hg38.chr3_KI270784v1_alt 16592 5 + 184404 CAGGA s panTro5.chr1 222296878 5 + 228573443 GAGGA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213553 5 + 4392246 GAGGA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749945 5 - 99891981 GAGGA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127683371 5 - 192294377 GACGA i macFas5.chr3 C 0 C 0 s calJac3.chr2 1420868 5 + 204313951 AAGGA i calJac3.chr2 C 0 I 403 e cebCap1.NW_016108107v1 281300 202 + 373793 I e cerAty1.NW_012005081v1 28384 115 - 113584 I e saiBol1.JH378167 165949 0 + 13147851 C e colAng1.NW_012116633v1 739849 219 + 1536524 I e rheMac8.chr3 55090030 140 + 185818997 I e chlSab2.chr21 124140637 141 - 127223203 I e macNem1.NW_012013022v1 8929575 195 - 10413719 I e panPan2.chr7 56709500 55 + 162613886 I a score=6136.000000 s hg38.chr3_KI270784v1_alt 16597 10 + 184404 ATGAGCCCCA s panTro5.chr1 222296883 10 + 228573443 ATGAGCCCCA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213558 10 + 4392246 ATGAGCCCCA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749950 10 - 99891981 ATGAGCCCCA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127683376 8 - 192294377 ATGAGCCG-- i macFas5.chr3 C 0 C 0 e cebCap1.NW_016108107v1 281300 202 + 373793 I e calJac3.chr2 1420873 403 + 204313951 I e cerAty1.NW_012005081v1 28384 115 - 113584 I e saiBol1.JH378167 165949 0 + 13147851 C e colAng1.NW_012116633v1 739849 219 + 1536524 I e rheMac8.chr3 55090030 140 + 185818997 I e chlSab2.chr21 124140637 141 - 127223203 I e macNem1.NW_012013022v1 8929575 195 - 10413719 I e panPan2.chr7 56709500 55 + 162613886 I a score=-330.000000 s hg38.chr3_KI270784v1_alt 16607 2 + 184404 -TG s panTro5.chr1 222296893 2 + 228573443 -TG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213568 2 + 4392246 -TG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749960 2 - 99891981 -TG i nomLeu3.chr17 C 0 C 0 s calJac3.chr2 1421276 2 + 204313951 TT- i calJac3.chr2 I 403 C 0 e cebCap1.NW_016108107v1 281300 202 + 373793 I e cerAty1.NW_012005081v1 28384 115 - 113584 I e saiBol1.JH378167 165949 0 + 13147851 C e colAng1.NW_012116633v1 739849 219 + 1536524 I e rheMac8.chr3 55090030 140 + 185818997 I e chlSab2.chr21 124140637 141 - 127223203 I e macNem1.NW_012013022v1 8929575 195 - 10413719 I e macFas5.chr3 127683384 0 - 192294377 C e panPan2.chr7 56709500 55 + 162613886 I a score=29327.000000 s hg38.chr3_KI270784v1_alt 16609 21 + 184404 GGCCTGAAGAGGCCACTGGCA s panTro5.chr1 222296895 21 + 228573443 GGCCTGAAGAGGCCACTGGCA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213570 21 + 4392246 GGCCTGAAGAGGCCACTGGCA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46749962 21 - 99891981 GGCCTGAAGAGGCCACTGGCA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127683384 21 - 192294377 GGCCTAATGAGGCCACGGGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929770 20 - 10413719 GGCCTGAAGA-GCCACTGGGT i macNem1.NW_012013022v1 I 195 C 0 s calJac3.chr2 1421278 21 + 204313951 GGCCTAAAGAGGCCATGGGGT i calJac3.chr2 C 0 C 0 e cebCap1.NW_016108107v1 281300 202 + 373793 I e cerAty1.NW_012005081v1 28384 115 - 113584 I e saiBol1.JH378167 165949 0 + 13147851 C e colAng1.NW_012116633v1 739849 219 + 1536524 I e rheMac8.chr3 55090030 140 + 185818997 I e chlSab2.chr21 124140637 141 - 127223203 I e panPan2.chr7 56709500 55 + 162613886 I a score=7483.000000 s hg38.chr3_KI270784v1_alt 16630 3 + 184404 GGC s panTro5.chr1 222296916 3 + 228573443 GGT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4213591 3 + 4392246 GGC i gorGor5.CYUI01015383v1 C 0 I 775 s nomLeu3.chr17 46749983 3 - 99891981 GGC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127683405 3 - 192294377 GGC i macFas5.chr3 C 0 I 1 s macNem1.NW_012013022v1 8929790 3 - 10413719 GGC i macNem1.NW_012013022v1 C 0 I 1 s calJac3.chr2 1421299 3 + 204313951 GGC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108107v1 281502 3 + 373793 GGC i cebCap1.NW_016108107v1 I 202 C 0 e cerAty1.NW_012005081v1 28384 115 - 113584 I e saiBol1.JH378167 165949 0 + 13147851 C e colAng1.NW_012116633v1 739849 219 + 1536524 I e rheMac8.chr3 55090030 140 + 185818997 I e chlSab2.chr21 124140637 141 - 127223203 I e panPan2.chr7 56709500 55 + 162613886 I a score=205.000000 s hg38.chr3_KI270784v1_alt 16633 1 + 184404 G s panTro5.chr1 222296919 1 + 228573443 G i panTro5.chr1 C 0 C 0 s nomLeu3.chr17 46749986 1 - 99891981 G i nomLeu3.chr17 C 0 C 0 s calJac3.chr2 1421302 1 + 204313951 A i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108107v1 281505 1 + 373793 A i cebCap1.NW_016108107v1 C 0 C 0 e cerAty1.NW_012005081v1 28384 115 - 113584 I e saiBol1.JH378167 165949 0 + 13147851 C e colAng1.NW_012116633v1 739849 219 + 1536524 I e rheMac8.chr3 55090030 140 + 185818997 I e chlSab2.chr21 124140637 141 - 127223203 I e macNem1.NW_012013022v1 8929793 1 - 10413719 I e macFas5.chr3 127683408 1 - 192294377 I e panPan2.chr7 56709500 55 + 162613886 I e gorGor5.CYUI01015383v1 4213594 775 + 4392246 I a score=15291.000000 s hg38.chr3_KI270784v1_alt 16634 5 + 184404 GGAGC s panTro5.chr1 222296920 5 + 228573443 GGAGC i panTro5.chr1 C 0 I 1180 s nomLeu3.chr17 46749987 5 - 99891981 GGAGC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127683409 5 - 192294377 GGAGC i macFas5.chr3 I 1 C 0 s macNem1.NW_012013022v1 8929794 5 - 10413719 GGAGC i macNem1.NW_012013022v1 I 1 C 0 s colAng1.NW_012116633v1 740068 5 + 1536524 GGAGC i colAng1.NW_012116633v1 I 219 C 0 s calJac3.chr2 1421303 5 + 204313951 GGAAC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108107v1 281506 5 + 373793 GGAAC i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6186236 5 - 15679484 GGAAC i aotNan1.NW_018487315v1 N 0 C 0 e cerAty1.NW_012005081v1 28384 115 - 113584 I e saiBol1.JH378167 165949 0 + 13147851 C e rheMac8.chr3 55090030 140 + 185818997 I e chlSab2.chr21 124140637 141 - 127223203 I e panPan2.chr7 56709500 55 + 162613886 I e gorGor5.CYUI01015383v1 4213594 775 + 4392246 I a score=7788.000000 s hg38.chr3_KI270784v1_alt 16639 3 + 184404 TGG s panTro5.chr1 222298105 3 + 228573443 TGG i panTro5.chr1 I 1180 C 0 s nomLeu3.chr17 46749992 3 - 99891981 TGG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127683414 3 - 192294377 GGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929799 3 - 10413719 TAG i macNem1.NW_012013022v1 C 0 C 0 s colAng1.NW_012116633v1 740073 3 + 1536524 TGG i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421308 3 + 204313951 TGG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108107v1 281511 3 + 373793 TGG i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6186241 3 - 15679484 TGG i aotNan1.NW_018487315v1 C 0 C 0 e cerAty1.NW_012005081v1 28384 115 - 113584 I e saiBol1.JH378167 165949 0 + 13147851 C e rheMac8.chr3 55090030 140 + 185818997 I e chlSab2.chr21 124140637 141 - 127223203 I e panPan2.chr7 56709500 55 + 162613886 I e gorGor5.CYUI01015383v1 4213594 775 + 4392246 I a score=70660.000000 s hg38.chr3_KI270784v1_alt 16642 27 + 184404 GTGTGTAGAAGCTGCTGAAAGGTTGGG s panTro5.chr1 222298108 27 + 228573443 GTGTGTAGAAGCTGCTGAAAGACTGGG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4214369 27 + 4392246 GTGTGTAGAAGCTGCTGAAAGGTTGGG i gorGor5.CYUI01015383v1 I 775 C 0 s nomLeu3.chr17 46749995 27 - 99891981 GCCTGCCGAAGCGGCAGAGAGGCGGGA i nomLeu3.chr17 C 0 I 33877 s macFas5.chr3 127683417 27 - 192294377 GCCCGGCGGAGCTGTCGAAAGGCAGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929802 27 - 10413719 GTGTGTAGAGGCTGCTGAAAGGCAGGG i macNem1.NW_012013022v1 C 0 C 0 s colAng1.NW_012116633v1 740076 27 + 1536524 GTGTGTAGAGGCTGCTGAAAGGCAGGG i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421311 26 + 204313951 GTGTGTAGAGGCTGCTGAAAGGCAGG- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108107v1 281514 26 + 373793 GCGTGTAGAGGCTGCTGAAAGGCAGG- i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6186244 26 - 15679484 GCGTGTAGAGGCTGCTGAAAGGCAGG- i aotNan1.NW_018487315v1 C 0 C 0 e cerAty1.NW_012005081v1 28384 115 - 113584 I e saiBol1.JH378167 165949 0 + 13147851 C e rheMac8.chr3 55090030 140 + 185818997 I e chlSab2.chr21 124140637 141 - 127223203 I e panPan2.chr7 56709500 55 + 162613886 I a score=54535.000000 s hg38.chr3_KI270784v1_alt 16669 22 + 184404 AG----CTTGGCTTGGGGGGTCCACA s panTro5.chr1 222298135 22 + 228573443 AG----CTTGGCTTGGGGGGTCCACA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4214396 21 + 4392246 AG----CTTGGCTT-GGGGGTCCACA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46783899 22 - 99891981 AG----CTTGGCTTGGGGGGACCACG i nomLeu3.chr17 I 33877 C 0 s macFas5.chr3 127683444 25 - 192294377 -GGAGCTCTGGCCTGGGGAGGCCGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929829 21 - 10413719 -G----CTTGGCTTGGGGGGGCCACG i macNem1.NW_012013022v1 C 0 C 0 s colAng1.NW_012116633v1 740103 21 + 1536524 -G----CTTGGCTTGGGGGAGCAACG i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421337 22 + 204313951 AG----CTTGGCTTCTTGGGGCCATC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108107v1 281540 22 + 373793 AG----CTTGGCTTGGTGGGGCCATG i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6186270 22 - 15679484 AG----CTTGGCTTGGTGGGGCCATG i aotNan1.NW_018487315v1 C 0 C 0 e cerAty1.NW_012005081v1 28384 115 - 113584 I e saiBol1.JH378167 165949 0 + 13147851 C e rheMac8.chr3 55090030 140 + 185818997 I e chlSab2.chr21 124140637 141 - 127223203 I e panPan2.chr7 56709500 55 + 162613886 I a score=121469.000000 s hg38.chr3_KI270784v1_alt 16691 30 + 184404 GTGAGGTAGATGCTGGGCGTGAAGAATCTG s panTro5.chr1 222298157 30 + 228573443 GTGAGGCAGATGCTGGGCCTGAAGAATCTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56709555 30 + 162613886 GTGAGGCAGATACTGGGCCTGGAAAGTCTG i panPan2.chr7 I 55 C 0 s gorGor5.CYUI01015383v1 4214417 30 + 4392246 GTGAGGCAGATGCTGGGCCTGAAGAATCTG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46783921 30 - 99891981 GTGAGGCAGATGCTGGGCCTGAAGAATCTG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127683469 30 - 192294377 GTCAGGCGAGAGCTGGGCGTGGAGAGTCCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929850 30 - 10413719 GTGAGGCAGATGCTGGGCCTGGAGAATCTG i macNem1.NW_012013022v1 C 0 C 0 s colAng1.NW_012116633v1 740124 30 + 1536524 GTGAGGCAGATGCTGGGCCTGGAGAATCTG i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421359 30 + 204313951 ATGAGGCAGATGCTGGATGTGAAGAGTCTG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108107v1 281562 30 + 373793 GTGAGGCAGATGCTGGACGTGAAGAGTCTG i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6186292 30 - 15679484 ATGAGGCAGATACTGGCTGTGAAGAGTCTG i aotNan1.NW_018487315v1 C 0 C 0 e cerAty1.NW_012005081v1 28384 115 - 113584 I e saiBol1.JH378167 165949 0 + 13147851 C e rheMac8.chr3 55090030 140 + 185818997 I e chlSab2.chr21 124140637 141 - 127223203 I a score=81270.000000 s hg38.chr3_KI270784v1_alt 16721 12 + 184404 CTGTGAGGCAGA s panTro5.chr1 222298187 12 + 228573443 CTGTGAGGCAGA i panTro5.chr1 C 0 C 0 s panPan2.chr7 56709585 12 + 162613886 CTGTGAGGCAGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4214447 11 + 4392246 CTGTGAGG-AGA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46783951 12 - 99891981 CTGTGAGGCAGA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127683499 12 - 192294377 CTGGGAGGCAGA i macFas5.chr3 C 0 I 1221 s macNem1.NW_012013022v1 8929880 12 - 10413719 CTGTGAGGCAGA i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 28499 12 - 113584 CTGTGAGGCAGA i cerAty1.NW_012005081v1 I 115 C 0 s chlSab2.chr21 124140778 12 - 127223203 CTGTGAGGCAGA i chlSab2.chr21 I 141 C 0 s colAng1.NW_012116633v1 740154 12 + 1536524 CTGTGAGGCAGA i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421389 12 + 204313951 CTGTGAGGCAGA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108107v1 281592 12 + 373793 CTGTGAGGCAGA i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6186322 12 - 15679484 CTGTGAGGCAGA i aotNan1.NW_018487315v1 C 0 C 0 e saiBol1.JH378167 165949 0 + 13147851 C e rheMac8.chr3 55090030 140 + 185818997 I a score=97891.000000 s hg38.chr3_KI270784v1_alt 16733 20 + 184404 CGTTGGGACTGTAGAGGCTG s panTro5.chr1 222298199 20 + 228573443 TGTTGGGACTATAGAGGCCG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56709597 20 + 162613886 GGTTGGGCCTGTAGAGGCCG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4214458 18 + 4392246 TGTTGGGACTGTAGAGGC-- i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46783963 20 - 99891981 TGTTGGGCCTGTAGAGGCGG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127684732 20 - 192294377 AGCTGGGCCTGTACAGGCTG i macFas5.chr3 I 1221 C 0 s macNem1.NW_012013022v1 8929892 20 - 10413719 TATTGGGCCTGTAGAGGCTG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 28511 20 - 113584 GGTTGAGCCTATAGAGGCTG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124140790 20 - 127223203 GGTTGAGCCTATAGAGGCTG i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 740166 20 + 1536524 TGTTGGGCCTGTAGAGGCTG i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421401 20 + 204313951 GGTTAGGCCTGTAGAGGCAG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108107v1 281604 20 + 373793 GGTTAGGCCTGCAGAGGCAG i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6186334 20 - 15679484 GGTCAGGCCTGCAGAGGCTG i aotNan1.NW_018487315v1 C 0 I 306 e saiBol1.JH378167 165949 0 + 13147851 C e rheMac8.chr3 55090030 140 + 185818997 I a score=5032.000000 s hg38.chr3_KI270784v1_alt 16753 2 + 184404 AC s panTro5.chr1 222298219 2 + 228573443 AC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56709617 2 + 162613886 AT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4214476 1 + 4392246 -C i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46783983 2 - 99891981 AC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127684752 2 - 192294377 CC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929912 2 - 10413719 AC i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 28531 2 - 113584 AC i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124140810 2 - 127223203 AC i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 740186 2 + 1536524 AC i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421421 2 + 204313951 AT i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 165949 2 + 13147851 AA i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 281624 2 + 373793 AT i cebCap1.NW_016108107v1 C 0 C 0 e aotNan1.NW_018487315v1 6186354 306 - 15679484 I e rheMac8.chr3 55090030 140 + 185818997 I a score=40274.000000 s hg38.chr3_KI270784v1_alt 16755 6 + 184404 GGGAGG s panTro5.chr1 222298221 6 + 228573443 GGGAGG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56709619 6 + 162613886 GGGAGG i panPan2.chr7 C 0 I 35 s gorGor5.CYUI01015383v1 4214477 6 + 4392246 GGGAGG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46783985 6 - 99891981 GGGAGG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55090170 6 + 185818997 GGGAGG i rheMac8.chr3 I 140 C 0 s macFas5.chr3 127684754 6 - 192294377 GGGAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929914 6 - 10413719 AGGAGG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 28533 6 - 113584 AGGAGG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124140812 6 - 127223203 GGGAGG i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 740188 6 + 1536524 AGGAGG i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421423 6 + 204313951 GAGAGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 165951 6 + 13147851 GGGAGG i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 281626 6 + 373793 GGGAGC i cebCap1.NW_016108107v1 C 0 C 0 e aotNan1.NW_018487315v1 6186354 306 - 15679484 I a score=17107.000000 s hg38.chr3_KI270784v1_alt 16761 3 + 184404 CAG s panTro5.chr1 222298227 3 + 228573443 CAA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4214483 3 + 4392246 CAG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46783991 3 - 99891981 CAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55090176 3 + 185818997 CAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127684760 3 - 192294377 CAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929920 3 - 10413719 CAG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 28539 3 - 113584 CAG i cerAty1.NW_012005081v1 C 0 I 52 s chlSab2.chr21 124140818 3 - 127223203 CAA i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 740194 3 + 1536524 CAG i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421429 3 + 204313951 GAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 165957 3 + 13147851 CAG i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 281632 3 + 373793 CAG i cebCap1.NW_016108107v1 C 0 C 0 e aotNan1.NW_018487315v1 6186354 306 - 15679484 I e panPan2.chr7 56709625 35 + 162613886 I a score=39822.000000 s hg38.chr3_KI270784v1_alt 16764 9 + 184404 AGGCTGGGC s panTro5.chr1 222298230 9 + 228573443 AGGCTGGGC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4214486 9 + 4392246 AGGCTGGGC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46783994 9 - 99891981 GAGCTGGGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55090179 9 + 185818997 AGGCTGGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127684763 9 - 192294377 AAGATGGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929923 9 - 10413719 GAGCTGGGC i macNem1.NW_012013022v1 C 0 C 0 s chlSab2.chr21 124140821 9 - 127223203 GAGTTGGGC i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 740197 9 + 1536524 GAGCTGGGC i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421432 9 + 204313951 GACCTGGGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 165960 9 + 13147851 AAGTTGGGC i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 281635 9 + 373793 GAGCTGGGG i cebCap1.NW_016108107v1 C 0 C 0 e aotNan1.NW_018487315v1 6186354 306 - 15679484 I e cerAty1.NW_012005081v1 28542 52 - 113584 I e panPan2.chr7 56709625 35 + 162613886 I a score=21081.000000 s hg38.chr3_KI270784v1_alt 16773 3 + 184404 CTG s panTro5.chr1 222298239 3 + 228573443 CTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56709660 3 + 162613886 CTG i panPan2.chr7 I 35 C 0 s gorGor5.CYUI01015383v1 4214495 3 + 4392246 CTG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46784003 3 - 99891981 CTG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55090188 3 + 185818997 CTG i rheMac8.chr3 C 0 I 530 s macFas5.chr3 127684772 3 - 192294377 CTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929932 3 - 10413719 CTG i macNem1.NW_012013022v1 C 0 C 0 s chlSab2.chr21 124140830 3 - 127223203 CTG i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 740206 3 + 1536524 CTG i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421441 3 + 204313951 CTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 165969 3 + 13147851 CTC i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 281644 3 + 373793 CTG i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6186660 3 - 15679484 CTG i aotNan1.NW_018487315v1 I 306 C 0 e cerAty1.NW_012005081v1 28542 52 - 113584 I a score=2585.000000 s hg38.chr3_KI270784v1_alt 16776 1 + 184404 G s panTro5.chr1 222298242 1 + 228573443 G i panTro5.chr1 C 0 C 0 s panPan2.chr7 56709663 1 + 162613886 G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4214498 1 + 4392246 G i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46784006 1 - 99891981 G i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127684775 1 - 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929935 1 - 10413719 G i macNem1.NW_012013022v1 C 0 C 0 s chlSab2.chr21 124140833 1 - 127223203 G i chlSab2.chr21 C 0 I 39 s colAng1.NW_012116633v1 740209 1 + 1536524 G i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421444 1 + 204313951 T i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 165972 1 + 13147851 A i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 281647 1 + 373793 G i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6186663 1 - 15679484 G i aotNan1.NW_018487315v1 C 0 C 0 e cerAty1.NW_012005081v1 28542 52 - 113584 I e rheMac8.chr3 55090191 530 + 185818997 I a score=26532.000000 s hg38.chr3_KI270784v1_alt 16777 6 + 184404 AGGGGC s panTro5.chr1 222298243 6 + 228573443 AGGGGC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56709664 6 + 162613886 AGAAGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4214499 5 + 4392246 AGGGG- i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46784007 6 - 99891981 AGAGGC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127684776 6 - 192294377 GGAGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929936 6 - 10413719 AGAGGC i macNem1.NW_012013022v1 C 0 C 0 s colAng1.NW_012116633v1 740210 6 + 1536524 AGAGGC i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421445 6 + 204313951 AGAGGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 165973 6 + 13147851 AGAGGC i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 281648 6 + 373793 AGAGGC i cebCap1.NW_016108107v1 C 0 I 422 s aotNan1.NW_018487315v1 6186664 6 - 15679484 AGAGGC i aotNan1.NW_018487315v1 C 0 C 0 e cerAty1.NW_012005081v1 28542 52 - 113584 I e rheMac8.chr3 55090191 530 + 185818997 I e chlSab2.chr21 124140834 39 - 127223203 I a score=1542.000000 s hg38.chr3_KI270784v1_alt 16783 2 + 184404 CA s panTro5.chr1 222298249 2 + 228573443 CC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56709670 2 + 162613886 CA i panPan2.chr7 C 0 C 0 s nomLeu3.chr17 46784013 2 - 99891981 CA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127684782 2 - 192294377 CA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929942 2 - 10413719 TG i macNem1.NW_012013022v1 C 0 C 0 s colAng1.NW_012116633v1 740216 2 + 1536524 TG i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421451 2 + 204313951 TG i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 165979 2 + 13147851 CG i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6186670 2 - 15679484 CA i aotNan1.NW_018487315v1 C 0 C 0 e cebCap1.NW_016108107v1 281654 422 + 373793 I e cerAty1.NW_012005081v1 28542 52 - 113584 I e rheMac8.chr3 55090191 530 + 185818997 I e chlSab2.chr21 124140834 39 - 127223203 I e gorGor5.CYUI01015383v1 4214504 0 + 4392246 C a score=23661.000000 s hg38.chr3_KI270784v1_alt 16785 8 + 184404 CCAAGATG s panTro5.chr1 222298251 8 + 228573443 CCAAGATG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56709672 8 + 162613886 CCGGGATG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4214504 8 + 4392246 CCAAGATG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46784015 8 - 99891981 CCAAGATG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127684784 8 - 192294377 CTGTAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929944 8 - 10413719 CCAGGACA i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 28594 8 - 113584 CCAGGATG i cerAty1.NW_012005081v1 I 52 C 0 s chlSab2.chr21 124140873 8 - 127223203 CCAGGATG i chlSab2.chr21 I 39 C 0 s colAng1.NW_012116633v1 740218 8 + 1536524 CCAAGAGG i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421453 8 + 204313951 CCGGCATT i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 165981 8 + 13147851 CTGTCAAA i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6186672 8 - 15679484 CCGAGATG i aotNan1.NW_018487315v1 C 0 C 0 e cebCap1.NW_016108107v1 281654 422 + 373793 I e rheMac8.chr3 55090191 530 + 185818997 I a score=150556.000000 s hg38.chr3_KI270784v1_alt 16793 22 + 184404 CAGGAGCTGGGCCTGGAGAGGC s panTro5.chr1 222298259 22 + 228573443 CAGGAGCTGGGCCTGGAGAGGC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56709680 22 + 162613886 CGGGAGCTGGGCCTGGAGAGGC i panPan2.chr7 C 0 I 753 s gorGor5.CYUI01015383v1 4214512 22 + 4392246 CAGGAGCTGGGCCTGGAGAGGC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46784023 22 - 99891981 CAGGAGCTGCGCCTGGAGAGGC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127684792 22 - 192294377 CAGGAGCTGGGTCTTGGAAGGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929952 22 - 10413719 CAGAAGTTGGGCCTGAAGAGGC i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 28602 22 - 113584 CAGGAGCTGGGCCTGGAGAGGC i cerAty1.NW_012005081v1 C 0 I 750 s chlSab2.chr21 124140881 22 - 127223203 CAGGAGCTGGGCCTGGAGAGGC i chlSab2.chr21 C 0 I 751 s colAng1.NW_012116633v1 740226 22 + 1536524 CATGAGCTGGGCCTAAAGAGGC i colAng1.NW_012116633v1 C 0 I 1379 s calJac3.chr2 1421461 22 + 204313951 CAGTAGCTTTGCCTGGGGAGGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 165989 22 + 13147851 CAGGAGCTGGGTCTTGGAAGGT i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 282076 22 + 373793 CAGGAGCTGGGCCTGGAGAGGC i cebCap1.NW_016108107v1 I 422 I 231 s aotNan1.NW_018487315v1 6186680 22 - 15679484 CAGGAACTGGGCCTGAAGAGGC i aotNan1.NW_018487315v1 C 0 I 615 e rheMac8.chr3 55090191 530 + 185818997 I a score=-1276.000000 s hg38.chr3_KI270784v1_alt 16815 5 + 184404 TGCA-----------------------------A s panTro5.chr1 222298281 5 + 228573443 TGCC-----------------------------A i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4214534 5 + 4392246 TGCA-----------------------------A i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46784045 5 - 99891981 TGCC-----------------------------A i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127684814 5 - 192294377 GGCC-----------------------------A i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8929974 5 - 10413719 TGCC-----------------------------A i macNem1.NW_012013022v1 C 0 C 0 s calJac3.chr2 1421483 5 + 204313951 TGCC-----------------------------A i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 166011 34 + 13147851 GGCCGTGAAACAAAAGCCGGCCCTTGGGAGGCAG i saiBol1.JH378167 C 0 C 0 e aotNan1.NW_018487315v1 6186702 615 - 15679484 I e cebCap1.NW_016108107v1 282098 231 + 373793 I e cerAty1.NW_012005081v1 28624 750 - 113584 I e colAng1.NW_012116633v1 740248 1379 + 1536524 I e rheMac8.chr3 55090191 530 + 185818997 I e chlSab2.chr21 124140903 751 - 127223203 I e panPan2.chr7 56709702 753 + 162613886 I a score=56836.000000 s hg38.chr3_KI270784v1_alt 16820 9 + 184404 AGAAGCATG s panTro5.chr1 222298286 9 + 228573443 AGAAGCATG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4214539 9 + 4392246 AGAAGCATG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46784050 9 - 99891981 AGAAGCATG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55090721 9 + 185818997 AGAGGCAGG i rheMac8.chr3 I 530 C 0 s macFas5.chr3 127684819 9 - 192294377 TGAGGCAAA i macFas5.chr3 C 0 I 32 s macNem1.NW_012013022v1 8929979 9 - 10413719 AGAGGCATG i macNem1.NW_012013022v1 C 0 I 1444 s cerAty1.NW_012005081v1 29374 9 - 113584 AGAGGCAGG i cerAty1.NW_012005081v1 I 750 C 0 s chlSab2.chr21 124141654 9 - 127223203 AGAGGCAGG i chlSab2.chr21 I 751 C 0 s manLeu1.NW_012100344v1 33219 9 - 148006 AGAGGCAGG i manLeu1.NW_012100344v1 N 0 C 0 s colAng1.NW_012116633v1 741627 9 + 1536524 AGAGGCAGG i colAng1.NW_012116633v1 I 1379 C 0 s calJac3.chr2 1421488 9 + 204313951 AGAGGCATA i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 166045 9 + 13147851 AGAGGCAGG i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6187317 9 - 15679484 AGAGGCAGG i aotNan1.NW_018487315v1 I 615 C 0 e cebCap1.NW_016108107v1 282098 231 + 373793 I e panPan2.chr7 56709702 753 + 162613886 I a score=59276.000000 s hg38.chr3_KI270784v1_alt 16829 6 + 184404 AGCTGG s panTro5.chr1 222298295 6 + 228573443 AGCTGG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56710455 6 + 162613886 AGCTGG i panPan2.chr7 I 753 C 0 s gorGor5.CYUI01015383v1 4214548 6 + 4392246 AGCTGG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46784059 6 - 99891981 AGCTGG i nomLeu3.chr17 C 0 I 670 s rheMac8.chr3 55090730 6 + 185818997 AGCTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127684860 6 - 192294377 AGCTGG i macFas5.chr3 I 32 C 0 s macNem1.NW_012013022v1 8931432 6 - 10413719 AGCTGG i macNem1.NW_012013022v1 I 1444 C 0 s cerAty1.NW_012005081v1 29383 6 - 113584 AGCTGG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124141663 6 - 127223203 AGCTGG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 33228 6 - 148006 AGCTGG i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 741636 6 + 1536524 AGCTGG i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421497 6 + 204313951 AGCTGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 166054 6 + 13147851 AGCTGG i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6187326 6 - 15679484 AGCTGG i aotNan1.NW_018487315v1 C 0 C 0 e cebCap1.NW_016108107v1 282098 231 + 373793 I a score=40073.000000 s hg38.chr3_KI270784v1_alt 16835 5 + 184404 GCCTG s panTro5.chr1 222298301 5 + 228573443 GCCTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56710461 5 + 162613886 GCCTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4214554 5 + 4392246 GCCTG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46784735 5 - 99891981 GCCTG i nomLeu3.chr17 I 670 C 0 s rheMac8.chr3 55090736 5 + 185818997 GTCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127684866 5 - 192294377 GTCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8931438 5 - 10413719 GCCTG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 29389 5 - 113584 GTCTG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124141669 5 - 127223203 GTCTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 33234 5 - 148006 GTCTG i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 741642 5 + 1536524 GCCTG i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421503 5 + 204313951 GCCTA i calJac3.chr2 C 0 I 357 s saiBol1.JH378167 166060 5 + 13147851 GCCTC i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6187332 5 - 15679484 GCCTG i aotNan1.NW_018487315v1 C 0 C 0 e cebCap1.NW_016108107v1 282098 231 + 373793 I a score=66387.000000 s hg38.chr3_KI270784v1_alt 16840 9 + 184404 GTGAGGTCG s panTro5.chr1 222298306 9 + 228573443 GTGAGGTCG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56710466 9 + 162613886 GTGAGGTTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4214559 9 + 4392246 GTGAGGTCG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46784740 9 - 99891981 GAGAGGCCG i nomLeu3.chr17 C 0 I 701 s rheMac8.chr3 55090741 9 + 185818997 GTGAGGTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127684871 9 - 192294377 GTGAGGTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8931443 9 - 10413719 GTGAGGTCG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 29394 9 - 113584 GTGAGGTTG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124141674 9 - 127223203 GTGAGGTCG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 33239 9 - 148006 GTGAGGTCG i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 741647 9 + 1536524 GTGAGGTAG i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421865 9 + 204313951 GAGAGGCTG i calJac3.chr2 I 357 C 0 s saiBol1.JH378167 166065 9 + 13147851 GTGAGGTTG i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6187337 9 - 15679484 AGGAGGTTG i aotNan1.NW_018487315v1 C 0 C 0 e cebCap1.NW_016108107v1 282098 231 + 373793 I a score=280111.000000 s hg38.chr3_KI270784v1_alt 16849 35 + 184404 ACTTGAGAAAGT----TCAGGGCCTGGAGAGAAGGCTGG s panTro5.chr1 222298315 35 + 228573443 ACTTGAGAAAGT----TCAGGGCCTGGAGAGAAGGCTGG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56710475 39 + 162613886 ACTTGAGAACCTTCTCTCTGGGCCTGGAGAGAAGGCTGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4214568 34 + 4392246 ACTTGAGAAAGC----TCAGGGCCTGGAG-GAAGGCTGG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46785450 35 - 99891981 ACTTGAGAAAGT----TCTGGGCCTGGAGAGAAGGCTGG i nomLeu3.chr17 I 701 C 0 s rheMac8.chr3 55090750 35 + 185818997 ACTTGAGAAAGT----TCTGGGCCTGGAGAGAAGACTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127684880 35 - 192294377 ACTTGAGAAAGT----TCTGGGCCTGGAGAGAAGACTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8931452 35 - 10413719 ACTTGAGAAAGT----TCTGGGCCTGGAGAGAAGGCTGG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 29403 35 - 113584 ACTTGAGAAAGT----TCTGGGCCTGGAGAGAAGACTGG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124141683 35 - 127223203 ACTTGAGAAAGT----TCTGGGCCTGGAGAGAAGACTGG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 33248 35 - 148006 ACTTGAGAAAGT----TCTGGGCCTGGAGAGAAGACTGG i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 741656 35 + 1536524 ACTTGAGAAAGT----TCTGGGCCTGGAGAGAAGGCTGG i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1421874 35 + 204313951 ACTTGTGGACAC----TTTGGGCCTGGATAGGCCACCCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 166074 35 + 13147851 ACTTGAGAAAGT----TCTGGGCCTGGAGAGAAGGCTGG i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6187346 35 - 15679484 ACTTGAGAAAGT----TCTGGATTTGGAGAGAAGGCTGG i aotNan1.NW_018487315v1 C 0 C 0 e cebCap1.NW_016108107v1 282098 231 + 373793 I a score=2165175.000000 s hg38.chr3_KI270784v1_alt 16884 266 + 184404 GAGGCAGGAGCTGGGTCTAAAGAGGCCATTGTAACGATGGAGCTGTGCCTGTGGAGGCTGTTGTGAGGCAGTAGCCTCATCTGCGGAGGCTGCCGTGACGTAGGGTATGGGCCTAAATAGGCCATTGTGAGTCATGAGCTTGGTCTGTAGAGGCTGAC-TGGAGAAAGTTCTGG-GCCTGG---------AGAGGCTGCCGGGAGGTAGGAGCTGGGCCAAAAgatgtaagcaca------tttgcatttattaggcactttatttccattattac-------------------------------------------------------actgtaa s panTro5.chr1 222298350 266 + 228573443 GAGGCAGGAGCTGGGTCTAAAGAGGCCATTGTAACGATGGAGCTGTGCCTGTGGAGGCTGTTGTGAGGCAGTAGCCTCATCTGCGGAGACTGCCGTGACGTAGGGTATGGGCCTAAATAGGCCATTGTGAGTCATGAGCTTGGTCTGTAGAGGCTGAC-TGGAGAAAGTTCTGG-GCCTGG---------AGAGGCTGCCGGGAGGTAGGAGCTGGGCCAAAAgatgtaagcaca------ttcacatttattaggcacttcatttccattattac-------------------------------------------------------actgtaa i panTro5.chr1 C 0 C 0 s panPan2.chr7 56710514 265 + 162613886 GAGGCAGGAGTTGGGCCTAAAGAGGCCATTGTAATGATGGAGCTGGGCCTGTGGAGGCTGCCATGAGGCAGCAGCCTCATCTGTGGAGACTGCCATGAGGTAGGGTATGGGCCTAAATAGGCCATTGTGAGCCACAAGCTTGGCCCGTAGAGGCCGAC-TGGAGAAAGTTCTGG-ACCTGG---------AGAGGCTGCCGGGAGGCAGGAGCTGAGCCAAAAgattcaagcgca------tt-acatttattaggcactttatttccattattac-------------------------------------------------------attgtag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4214602 319 + 4392246 GAGGCAGGAGCTGGGTCTAAAGAGGCCATTGTAACG-TGGAGCTGTGCCTGTGGAGGCTGTTGTGAGGCAGTAGGCTCATCTGCGGAGACTGCCATGAGGT-GGGTATGGGCCTAAATAGGCCATTGTGAGTCATGAGCTTGGTCTGTAGAGGCTGAC-TGGAGAAAGTTCTGG-GCCTGG---------AGAGGCTGCCGGGAAGTAGGAGCTGGGCCAAAAgatttaagcaca------tttacatttattaggcactttatttccattattacaatagataataatatatttaatatattaatatataaATATAATAAAAATAAAtataatataa i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46785485 263 - 99891981 GGGGCAGGAGCTGGGCCTAAAGAGGCCATTGTAACGATGGAGCTGTGCCTGTGGAGGCTGTTGTGCGGCAGTAGCCTCATCTGCAGAGACTGCCGTGAGGTAGGGTATGGGCCTAAATAGGCCATTGTGAGCCATGAGCTTGG-CTATAGAGACCGAC-TGGAGAAAGATCTGG-GCC-AG---------AGAGACTGCCAGGAGGCAGGAACTGGGCCAAAAgactctagcaca------tt-acatttattaggcactttatttccattattac-------------------------------------------------------atcataa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55090785 274 + 185818997 GAGGCAGGAGCTGGGTCTAAAGAGGCCGTTGTAATCATGGAGCTGGGCCAGTGGAGGCTGTTGTGAGGCAGTAGACTCATCCGCGGAGACTGCTGTGAGGTAGGGTGTGGGCCTAAATAGACCATTGTGAGTCATGAGCTTGGTCTGTAGAGGCCGAT-TGGAGAAAGTTTGGG-GCCTGGAGAGGTTGCAGAGGCTGTTGAGAGGCAAGACCTGGGCCAAAAgattcaagtatg------tt-atatttattaggtactttatttcctttattaa-------------------------------------------------------attgtaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127684915 274 - 192294377 GAGGCAGGAGCTGGGTCTAAAGAGGCCGTTGTAATCATGGAGCTGGGCCAGTGGAGGCTGTTGTGAGGCAGTAGACTCATCCGCGGAGACTGCCGTGAGGTAGGGTGTGGGCCTAAATAGACCATTGTGAGTCATGAGCTTGGTCTGTAGAGGCCGAT-TGGAGAAAGTTTGGG-GCCTGGAGAGGTTGCAGAGGCTGTTGAGAGGCAAGACCTGGGCCAAAAgattcaagtatg------tt-atatttattaggtactttatttcctttattaa-------------------------------------------------------attgtaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8931487 232 - 10413719 GAGGCAGGAGCTGGGCCTCAAGAGGCCGTTGTAATGATGGAGCTGGGCCTGTGGAGGCTGT--------------------------------CATGAGGTAGGGTATGGGCCTAAATAGGCCATTGTGAGCCATGAGCTTGACCCGTAGAGGCCGAC-TGGAGAAAGTTCTGG-ACCTGG---------AGAGGCTGCCAGGAGGCAGGAGCTGAGCCAAAAgattcaagcaca------tt-acatttattaggcacttt-tttccattattac-------------------------------------------------------attgtaa i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 29438 271 - 113584 GAGGCTGGAGCTGGGCCTAAAGAGGCTGTCGTAACGATGGAGCTGGGCCTGTGGATGCTGTTGTGAGGCAGTAGCCTCATCTGCGGAGACTGCCGTAAGGTAGGGTATGGGCCTAAATAGACCATTGTGAGTCATGAGCTTGGTCTGTAAAGGCCAAC-TGGAGAAAGTTCTGG-GCCTGG---------AGAGGCTGCCGGGAGGCAAGACCTGGGCCAAAAgattcaagcatattacattt-acatttattaggtactttatttccactattaa-------------------------------------------------------attgtga i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124141718 274 - 127223203 GAGGCAGGAGCTGGCTCTAAAGAGGCCGTGGTAACGATGGAGCTGGGCCTGTGGAGGCTGTTGTGAGGCAGTAGCCTTATCTGTGGAGACTGCTGTGAGGTAGGGCACGGGCCTAAATAGACCATTGTGAGTCATGAGCTTGGTCTGTAGAGGCCGAC-TGGAGAAAGTTCGGG-GCCTGGAGAGGCTGCAGAGGCTGCCGGGAGGCAAGACCTGGGCCAAAAgattcaaccttg------tt-acatttattaggtactttatttccattattaa-------------------------------------------------------attgtga i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 33283 275 - 148006 GAGGCAGGAGCTGGGTCTACAGAGGCCGTTGTAACGATGGAGCTGGGCCTGTGGAGGCTGTTGTGAGGCAGTAGCCTCATCGGCGGAGACTGCCGTGAGGTAGGGTATGGGCCTAAATAGACCATTGTGAGTCATGAGCTTGGTCTGTAGAGGCCGAC-TGGAGAAAGTTCGGGTTCCTGGAGAGGTTGCAGAGGCTGTCGAGAGGCAAGACCTGGGCCAAAAgattcaagtatg------tt-acatttattaggtactttatttccattataaa-------------------------------------------------------attgtaa i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 741691 227 + 1536524 GAGGCAGGAGCTGGGCCTGAAGAGGCCATTGTAATGATGGAGCTGGGCCTGTGGAGGCTGC--------------------------------CATGAGGTAGGGTATGGGCCTAAATAGGCCATTGTGAGCCATGAGCTTGACCCGTAGAGGCCAGT-TGGAGAAAGTTCTGG-ACCTGG---------AGAGGCTGCCAGGAGGCAGGAGCTGAGCCAAAAgattcaagcaca------tt-a-----attaggcacttt-tttccattattac-------------------------------------------------------attgtaa i colAng1.NW_012116633v1 C 0 I 118 s calJac3.chr2 1421909 260 + 204313951 GAGTCAGGAGCTGCAACTAGAAAGGCCATTGTAAGGGAGGAGCTGGGCTTGTGAACACTGCTGCGAGGCGGTAGCCTCAACTGCAAAGACTACCATGAGGTAGGGTATGGGCCTAAATAGGCCATTGTGAGCCATGAG------CTGTGGAGGCCGACATGGAAAAAGTTCTGG-GCCTGG---------AAAGGCTGCGAGGAGGCAGGAGCGCAGCCAAAAgattcaagcaca------tt-acgtttattgggcactttatttccattaatac-------------------------------------------------------attgtaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 166109 265 + 13147851 GCGGCAGGAGCTGGGCCGAAAGAGGCCATTGTAATGACAAGCCTGGGCCTGTGGAGGCTGCCGTGAGGCCGCAGCCTCGACTGCAAAGACTACCATGAGGTAGGGTATGCGCCTAAATAGGCCATTGTGAGCCATGAGCTTGGCCTGTAGAGGCCGACATGGAAGAAGTTCTGG-GCCTGG---------AGAGGCTGCCGGGAGGCAGGAGCAGAGCCAAAAgattcaagcaca------tt-acctttagtgggcactttatttccattattac-------------------------------------------------------att-taa i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 282329 266 + 373793 GAGGCAGGAGCTAGAACTAAAGAGGCCATTGTAAGGGAAGAGCTGGGCCTGTGGAGGCTGCCGTGAGGCAGTAGCCTCAACTGTGAAGACTACCATGAGGTAGGGTATGCGCCTAAATAGGCCATTGCGAGCCATGAGCTTGGTCTGTAGAGGCCGACATGGAAAAAGTTATGG-GTCTGG---------AGAGGCTGCCGGGAGGCAGGAGCGGAGCCAgaagattcaagcaca------tt-acatttattgggcactttatttccattattac-------------------------------------------------------attgtaa i cebCap1.NW_016108107v1 I 231 C 0 s aotNan1.NW_018487315v1 6187381 266 - 15679484 GAGGCAGGAGCTGGGCCTAAAGAGGCCATTATAATGATAAACCTGGGTTTGTGGAGGCTGCCGTCAGGCAGTAGCCTCAACTGCAAAGACTACCATGAGGTAGGGTATGGGCCTAAATAGGCCATTGTGAGCCATGAGCTTGGCCTGTATAGGCCGACATGGAAAAAGTTCTGG-GCCTGG---------AGAGGCTACCGAGAGGCAGGAGCGGAGCCAAAGgattcaagcaca------tt-acatttattgggcactttatttccatcattac-------------------------------------------------------attgtaa i aotNan1.NW_018487315v1 C 0 C 0 a score=1465530.000000 s hg38.chr3_KI270784v1_alt 17150 184 + 184404 tatataataaaataattatagaactcaccataatgtagaattagtgggcgtgtcaagcttgttttcctgcaactggatggtcccacctgagcgtgatgggagaaagtgacagatcaataggtattagactctcataaggac---agcgcaacctcgatccctcacatgcacggttcacaacagggtg s panTro5.chr1 222298616 184 + 228573443 tatataataaaataattatagaactcaccataatgtagaatcagtgggcgtgttaagcttgttttcctgcaactggatggtcccacctgagcgtgatgggagaaagtgacagatcaataggtattagactctcataaggac---agcgcaacctagatccctcacatgcacggttcacaacagggtg i panTro5.chr1 C 0 C 0 s panPan2.chr7 56710779 182 + 162613886 tatataatgaaataattatagaactcaccataatgtagaatcagtggacatgttaagcttattttcctgcaacaagatggtcccatctgaat-tgatggaagaaagtgacagataatcaggtattagattctcatagggac---agcacaacccagatctctcgcatgcacggtttgc-ataggatg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4214921 184 + 4392246 tatataataaaataattatagaactcaccataatgtagaatcagtgggcgtgttaagcttgttttcctgaaactggatggtcccacctgagcgtgatgggacaaagtgacagatcaataggtattagattctcataaggac---agcacaacctagatccctcacatgcacggttcacaacagggtg i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46785748 184 - 99891981 tatctaatgaaataattatagaactcaccataatgtagaatcagtgggcgggttaagcttgttttcctgcgactagatggtcccatctgagcatgatgggagaaagtgacagatcaataggtattagattctcataaggac---agcacaacctagatccctcacatgcacggttcgcaatagggtg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55091059 177 + 185818997 tagatga-aaagtaattatagaactcaccataatgtagaatcagtgggcatgttaagcttgttttcctgcgactagatggtcccatctgagcat------agaaggtgacag---attaggcattagattctcatagggacaaaagcacaacctagatccctcacatgcatggttcacaacagggtg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127685189 177 - 192294377 tagatga-aaagtaattatagaactcaccataatgtagaatcagtgggcatgttaagcttgttttcctgcgactagatggtcccatctgagcat------agaaggtgacag---attaggcattagattctcatagggacaaaagcacaacctagatccctcacatgcatggttcacaacagggtg i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8931719 183 - 10413719 tatataatgaaataattatagaactcaccataatgtagaatcagtgggcatgttaggcttgttttcctgcaacaagacggtcccatctgagcttgacgggagaaagtgacagatcatcaggtattagattctcacagggac---agtgcaacccagatctctcgcatgtatggttcac-ataggatg i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 29709 184 - 113584 tatacagtaaagtaattatagaactcaccataatgtagaatcagtgggcatgttaagcttgttttcctgcgactagatggtcccatctgagcatgacgggagaaagtgacagatcattaggcattagattctcatagggac---agcacaacctagatccctcacatgcacggttcacaacagggtG i cerAty1.NW_012005081v1 C 0 I 2109 s chlSab2.chr21 124141992 184 - 127223203 tatacagtaaagtaattatagaactcaccataatgtagaatcagtgggcatgttaagcttgttttcctgcgactagatggtcccatctgagcgtgacgggagaaagtgacagatcattaggcattagattctcatagggac---agcaaaacctagatgcctcacatgcacggttcacaacagggtg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 33558 177 - 148006 tagat-gaaaagtaattatagaactcaccataatgtagaatcagtgggcatgttaagcttgttttcctgcgactacatggtcccatctgagcat------agaaggtgacag---attaggcattagattctcatagggacaaaagcacaacctagatccctcacatgcacggttcacaacagggtg i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 742036 183 + 1536524 tatataatgaaataattacagaactcaccataatgtagaatcagtgggcatgttaaggttgttttcctgcaacaaggtggtcccatctgagcttgacgggagaaagtgacagatcatcaggtattagattctcacagggac---agtgcaacccagatctcttgcatgcacagttcac-ataggatg i colAng1.NW_012116633v1 I 118 C 0 s calJac3.chr2 1422169 179 + 204313951 tatgtgatgaaataattacagagctcaccgtaatttagaattagtgtcc--attaagcttgttttcctgag-ctagacggtcccatctgagtgtgacaggagaaagtgacagatcatcaggcatt--attctcacagggac---cacgcaaccttgatccctggcatgcatggttcacaatggggtt i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 166374 182 + 13147851 tatataatgaaataattacagaactcaccgtaatttagaattagtacacgtgttaagcttgttttcctgcgactagatattcccatctgagtgtgataggagaaagtgacacatcatcagtcatt--attctcacagggac---catgcaaccttcatccctggcatgtgtggttcacaacagggtt i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 282595 179 + 373793 tagataat-aaataattacagaactcaccataatttagaattagtatac--gttaagcttgttttcctgtgactagatggtcccatctgagtgtgataggagaaagtgacacatcatcaggcatt--attctcacagggac---catgcaaccttcatccctgggatgcatggttcacaatagggtt i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6187647 180 - 15679484 tatataatgaaataattacagaactcaccgtaatttagaattagtacac--gttaaggttgttttcctgcgactagattgtcccatctgagtgtgataggagaaagtgacacatcatcaggcatt--attctcacagggac---catgcaaccttgatccctggcatgcatggttcataatagggtt i aotNan1.NW_018487315v1 C 0 C 0 a score=12898015.000000 s hg38.chr3_KI270784v1_alt 17334 1678 + 184404 cgttctcctatgagcatctaatgctgctgctcatct--gagaaggtggagctcaggcgggaatgtgagcaaaggggagtggctgtaaatacagacgaagcttccctcactccctcactcgacaccgctcacctcctgctgtgtggctccttgcggctccatggctcaggggttggggacccctgCTCAAGTGCATCCAAAGCGACCCTTCCCACACCAGTCTTCACAGTGGTCAAGGGCAGCAACCACTTA----------------------------GCTCCCAAGGCATGTGCCTCAGCTGGCAT-TTCGTCA-----CAATCAACAGTAAGTGGTAGCTTGAGTCACTGTGAGGTCACCTACTGGAAATCACCAGCATCCCATTTCCCACTGGCAAAGAGCTCAGCACTGCCCCCTGGGAAACCAAACCTATGCCCAAATCCCATCTGTGTGGGTTTACCTCCTGGGACCCTTCCTAACAta-----ttagtcagagtccaatcaggaagcataaaccactcaaaagtttaaagtg-gtaaaatttaatacagagaattattcattataacaggtgaacagcataatgagagattg-gctagcacagagtaaagataactctagagaatatgggactagcCCAggccaggcatggtggctcatgcctgaaattccagccattacagaagctaatgcaggaggattgcttaaggccaggagctagagaccgctctggacgacacagtgagaccctgtctctatccaaaagaagaaaaaagttagctgggggtggtggtgcacacttgtagtcccagctactcggaatgctga-----------agtttgagcctgggaggtcaaggctgcagtgaggcatgattatgccactacagtccagcc-ggatgacagagcaagaccctgtctc-----aaagaa---caa---aaCCACA------ACAACCATTTACAGACAGAAAAGAAATAGAGCTAA-----TAAGCTGAGGAAAGATGTTgaaatgtgac----aagtaaagtaatatgaggtcttttgtctatttaaaataatcaaacaaaaaatggcttactaaattataataccctgtgctggcaaaggtgcagtgaaatgggcactttcttatactat-gaggggtggttaaattgtgtataagccttccagggtaaAGcctgtcaattttttaaaataatggagacagggtctcaccatactgccatactgcctcctccaactcttggcctcaagcaatcctcctctcttag----cctcc---------caaagtgctaagattatagctgggaggcacccaaaaccctgtcaatttACATCAAGGGTAAGGAGAATGTCCATTCACCATGACTCACAGTAATCTTACTTC-----------TGGGGAGACAATTCAATCTAAGCAAAAGGTCATCTGTACACACACAGTAAAAATCTGGGAGTAACTGAAGACAGAGTTGGTAAGTGAAATAAGAAACAGTTATAAGAAATTAAACTATGGTATCAATAGGCACCTGG--TAAAAGGTCAGTTGATGTTAGCTGCTACttttttgttgttttgagacagggtctcactctgtcacccaggctggagtgcagaggcctgatcatgactcactgcggtctcagcctccctgggctcaagtgatcctcccacctcagcctcccaagtagctgggactacaggaacatgccaccacactaggctaattcatgtatttttctgtagggatggtgactccc---- s panTro5.chr1 222298800 1676 + 228573443 cgttctcctatgagaatctaatgctgctgctgatct--gagaaggtggagctcaggcgggaatgtgagcaaaggggagtggctgtaaatacagactaagcttccctcactccctcactcgacaccactcacctcctgctgtgtggctccttgcggctccatggctcaggggttggggacccctgCTCAAGTGCATCCAAAACGACCCTTCCCACACCAGTCTTCACAGTGGTCAAGTGCAGCAACCACTTA----------------------------GCTCCCAAGGCATGTGCCTCAGCTGGCAT-TTCATCA-----CAATCAACAGTAAGTGGTAGCTTGAGTCACTGTGAGGTCACCTTCTGGAAATCACCAGCATCCCATTTCCCACTGGCAAAGAGCTCAGCACTGCCCCCTGGGAAACCAAACCTATGCCCAAATCCCATCTGTGTGGGTTTATCTCCTGGGACCCTTCCTAACAta-----ttagtcagagtccaatcaggaagcataaaccactcaaaagtttaaagtg-gtaaaatttaatacagagaattattcattataacaggtgaacagcataatgagagattg-gctagcacaaagtaaagagaactctagagaatataggactagcCCAggccaggcatggtggctcacgcctgaaattccagcaatttgagaagctaatgcaggaggattgcttaaggccaggagctagagaccggtctggacaacacagtgagaccctgtctctatccaaaagaagaaaaaagttagctgggagtggtggtgcacacttgtagtcccagctactcggaatgcgga-----------agtttgagcctgggaggtcaaggctgcagtgaggcatgattatgccactacagtccagcc-tggtgacagagcaagaccctgtctc-----aaagaa---caa---aaCAACA------ACAACCATTTACAGACAGAAAAGAAATAGAGCTAA-----TAAGCTGAGGAAAGATGTTgaaatgtgac----aagtaaagtaatatgagttcttttgtctatgtaaaataatcaaacaaaaaatgacttactaaattatactaccctgtgctggcaaaggtgcagtgaaatgggcactttcttatactat-gaggggtgtttaaattgtgtataagccttccagggtaaAGcctgtcaattttttaaaataatggagacagggtctcaccatactgccatactgcctcctccaactcttggcctcaagcaatcctcctctcttag----cctcc---------caaagtgctaagattatagctgggaggcacccaaaaccctgtcaatttACATCAAGGGTAATGAGAATGTCCATTCACCATGACTCACAGTAATCTTACTTC-----------TGGGGAGACAATTCTATCTAAACAAAAGGTCATCTGTACACACACAGTAAAAATCTGGGAGTAACTGAAGACAGAGTTGGTAAGTGAAATAAGAAACAGTTATAAGAAATTAAACTATGGTATCAATAGGCACCTGG--TAAAAGGTCAGTTGATGTTAGCTGCTACttttttgttgttttgagacagggtctcactctgtcacccaggctggagtgcagaggcctgatcatgactcactgcagtctcagcctccctgggctcaagtgatcctcccacctcagcctcccaagtagctgggactacaggaacatgccaccacactaggctaattcatgtatttttctgtagggatggtgact--c---- i panTro5.chr1 C 0 C 0 s panPan2.chr7 56710961 1681 + 162613886 catgctcctatgagaatctaatgctgctgctgatctgagagaaggcggagctcaggcgggaatatgagcaatggggagtggctgtaaatacagatgcagct--------tccctcactcaacaccactcacctcctgctgtgtggctccttaaatctccatggctcaggggttggggacccctgCTGAAGTGCATCCAAAAGGACCATTCCCACACCAGTCTTCATAGCGGTCAAGTGCAGCAACCACTTA----------------------------GCTCCCAAGGCATGTGCCTCAGCTGGCAT-TTCATCA-----CAATCAACAGTAAGCAGTAGCTTGAGTCATTGTGAGGTCACTTCCTGGAAATCACCAGCATTCCGTTTCCCATTGGCAAGGAGCTCAGCACTGCCCCTTGGATAACCAAACCTATCCCCAAATCCCATCTGTGTGAGTCTATCTCCAGGGACCCTTCTTAGCATA-----TT----Agagtccaaccaggagacataaaccacttaaaagtttaaagtg-gtaaaatttaatacagagaattattcattataacaggggaacagcataatgagagactg-gctagcacaaagtaaagagaactctagagaatataggactagcCCAggcgaggcatggtggctcatgcctgaaattccagcaatttaagaagccaacacaggaggactgcttgaggccgggagctagagattggcctggacaacacagtgagaccctgtctctatccaaaaaaagaaaaaa-ttagctgggagtggtggtgcacacttgtagtcccagctactcaggaagctgaagtgagagaatagtttgagcctgggaggtcaaggctacagtgagtcatgattatgccactacagtcaagcctgggtgacacagcaagaccccatctcaaacaaaacaa---caa---aacaacaacaaCCACAACCATTTACAGACAGAAAAGAAATAGAGCTAA-----TAAGCTAAGGGAAGATGCTGAAATGTGAC--------Caagcaatatgtggtattttatctatttaaaataatcaaacaaaaaataacttattaaattataataccctgtgctggcaaaggtgcagtgaaatggacactttcttatactag-gaggggtgtttaaattgtacaT-AGTCTTCCAAGGTAAAGCTTGGCAatttttta----aatagagacagggtctca--------ccttactgcctcctccaactcttggcctcaagcaatcctcctgtcttag----cct-c---------caaagggctgggattatagccaggaggcaccAAAAACCTTGTCAATGTACATCAAGGGCAATGAGAATGCCCATTCACCATGACTCACAGCAATCTTACTTCTGGAAATACCTTGGGGAGACAATTCAATCTAAACAAAAGGTCATCTGCATAAACACAGTGAAATTCTGGGAGTAATTGAAAACAGAGTGGTTAAGTTAAATAAGAAACAGTTATAAGAAATTATACTATGGTATTTATAGGCACCTGG--TAAAAGGTCAGTTAATGTTAGCTGCTACttttttgttgctttgagacagggtctcactctgtcacccaggctggagtgcagaggcctgatcatgactcactgcagtctcaacctccttggactcaagtgatcttcccacagcagcctcccaagtagctgggactacaggaacatgtcaccacactaggctaattcatgtacttttctgtagggatggtgcct--c---- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4215105 1680 + 4392246 cgttctcctatgagaatctaatgctgctgctcatct--gagaaggtggagctcaggcgggaatgtgagcaaaggggagtggctgtaaatacagacgaagcttccctcactccctcactcgacaccactcacctcctgctgtgtggctccctacggctccatggctcaggggttggggacccctgCTCAAGTGCATCCAAAGCGACCCTTCCCACACCAGTCTTCATAGTGGTCAAGGGCAGCAACCACTTA----------------------------GCTCCCAAGGCATGTGCCTCAGCTGGCAT-TTTGTCA-----CAATCAACAGTAAGTGGTAGCTTGAGTCATTGTGAGGTCACTTCCTGGAAATCACCAGCATCCCATTTCCCACTGGCAAAGAGCTCAGCACTGCCCCCTGGGAAACCAAACCTATGCCCAAATCCCATCTGTGTGGGTTTATCTCCTGGGACCCTTCCTAACAta-----ttagtcagagtccaatcaggaagcataaaccactcaaaagtttaaagtg-gtaaaatttaatacggagaattattcattataacaggtgaacagcataatgagagattg-gctagcacaaagtaaagagaactctagagaatacaggactagcCCAggccaggcatggtggctcatgcctgaaattccagcaatttgagaagctaatgcaggaggattgcttaaggccaggagctagagaccggtctggacaacacagtgagaccctgtctctatccaaaagaagaaaaaagttagctgggagtggtggtgcacacttgtagtcccagctactcggaatgctga-----------agtttgagcctgggaggtcaaggctgcagcgaggcatgattatgccactacagtccagcc-tggtgacagagcaagaccctgtctc-----aaagaa---caa---aacaaca------acaaCCGTTTACAGACAGAAAAGAGATAGAGCTAA-----TAAGCTGAGGAAAGATGTTgaaatgtgac----aagtaaagtaacatgaggtcttttgtctatttaaaataatcaaacaaaaaatgacttactaaattataataccctgtgctggcaaaggtgcagtgaaatgggcactttcttatactat-gaggggtgtttacattgtgtataagccttcccgggtaaagcctgtcaattttttaaaataatggagacagggtctcaccatactgccatactgcctcctccaactcttggcctcaagcaatcctcctctcttag----cctcc---------caaagtgctaagattatagctgggaggcaccCAAAACCCTGTCAATTTACATCAAGGGTAATGAGAATGTCCATTCACCATGACTCACAGTAATCTTACTTC-----------TGGGGAGACAATTCAATCTAAACAAAAGGTCATCTGTACACACACAGTAAAAATCTGGGAGTAACTGAAGACAGAGTTGGTAAGTGAAATAAGAAACAGTTCTAAGAAATTAAACTATGATATCAATAGGCACCTGGTATAAAAGGTCAGTTGATGTTAGCTGCTACttttttgttgttttgagacagggtctcactctgtcacccaggctggagtgcagaggcctgatcatgactcactgcagtctcagcctccctgggctcaagtgatcctcccacctcagcctcccaagtagctgggaatacaggaacatgccaccacactaggctaattcatgtatttttctgtagggatggtgactccc---- i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46785932 1722 - 99891981 catgctcctatgagaatctaatgctgttgctgatctgagagaagggggagctcaggcgggaatgtgagcaatggggagtggctgtaaatacagatgaacct--------tccctcacacgacaccactcatctcctgctgtgtggctccttacagctccatggctcaggggttggggacccctgCTCAAGTGCATCCAAAATGACCCTTCCCATACCAGTCTTCATAGTGGTCAACTGCAGCAACTACTTAGCATAGTGGTCAAATGCAGCTGGCATTTGCTCCCAAGGCATGTGCCTTAGCTGGCATGTGCCTCAGCTGGCAATCAACAGTAAGTGGTAGCTTGAGTCACTGTGAGGTCACTTACTGGAAATCAATAGCATCCCATTTCCCATTGGTAAGAAGCTCAGCACTGCCCCTTGGATAACCAAACCTATGCCCAAATCCCATCTGTGTGGGTTTATCTCCTGGGACCCTTCCTAGGAta-----ttagtcagagtccaatcaggagacataaaccactcaaaagtttgaagtg-gtaaaatttaatacagagaattattcattatgacaggggaacagcataatgagagattg-gctagcacaaagtaaaaagaactctagagaatacaggactagcCCAggccagacatggtggctcatgcctgaaatttcagcaatttgcgaagctaacacaggaggactgcttaaggccaggagctagagaccagcctggacaacacaatgaggccctgtctctacccaaaaaaagaaaaaatttagctgggagtgatggtgcacacttgtagtcccagctactcaggaagctgaagtgggagggtagtttgagcctgggaggtcaaggctgcagtgagtcatgattatgccactatagtcaagcctgggtgacagagcaagaccctgtctc-----aaagaa---caa---aacaaCC---ACCACCACCATTTACAGACAGAAAAGAAATACAGCTAA-----TAA------GAAAGATGTTGAAATGTGAC----AAGTAAAGTAATACGAGGTCTTTTATCTATTTAAAATAATCAAAC-AAAAATAACTTATTAAATTTtaataccctgtgctggcaaa-gtgcagtgaaatgggcactttcttatactat-gaggggtgtttacattgtatataagtcttccagggtaaagcttggcaatTTTTTAAAATAACagagacagggtctcaccatactgccatactgcctcctccaactcctggcctcaagtaatcctcctgccttag----cctcc---------caaagtgctgagattatagctgggaggcatcCAAAACCttgtcaatttacatcaagggtaatgagaatggtcattcaccatgactcacagtaatcttacttctggaaataccttggggagacaattcaatctaaacaaaaggtcatctgtacaaaCACAGTGAAAATCTGGGAGTAACTGAAGACGGAGTGGTTAAGCGAAGTAAGAAACAGTTATAAGAAATTAAACTATGGTATTAATAGGCACTTGG--TAAAAGGTCAGGTGATGTTAGCTGCTACttttttgttgttttgagacagggtctcactctgtcacccaggctggggtgcagaggcctgatcatgactcactgcagtctcagcctccctgggctcaagaaatcctcccacctcagcctcccacctagctggaactacaggaacatgccaccacactaggctaattcttgtatttttctgtacgcatggtgact--c---- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55091236 1674 + 185818997 cgtgctcctatgagaatctaatgctgctgctgacctgagagaaggtggagctcaggcgggaatgtgagcaaagcggagtggctgtaaatacagatgaagct--------tccctcactcactaccactcacctcctgttgtgtggctccttacagctccatggctcaggggttggggacccctgCTCAAGTGCATCCAAAAGGACCCTTCCCACACCAGTCTTCATAGCGGTCAACTGCAGCAACCACTTA----------------------------GCTCCCAAGGCATGTGCCTCAGTTGGCAT-TTCATCA-----CAATCAACAGTAAGTGGTAGCTTGAGTCACTGTGAGGTCACTTACCGGAAATCACCGGCATCCCATTTCCCATTGGCAAGGAGCTCAGCACTGTCCCTTGGAAAATCAAACCTATGCCCAAATCCCACCTGTGTGAGTTTATCTCCTGGGACCCTTCCGAGCAta-----ttagtcagagtccaatcaggagacaaaaaccactcaaaagtttaaagtg-gtaaaatttaatccagagaattattcattgtaacaggggaacagcataatgagagattg-gctagcacaaagtaaagagaactctagaaaaatcaggactagcCCAggccaggcatggtggctcatacccaaaattccagcaatttgagaagctaacacaggaggactgcttaaggccaggagctagagaccggtctggacaacacagtgagaccctgtctctattcaaaaaaagaaaaaaattagctgggagtggtggtacacacttgtagtctcagctactcaggaagctga-----------agtttgatcctgggagatcaaggctgcagtgagtcatgattatgccactacagtcaagcctgggtgacagagcaagaccctgtctc-----aaagaa---caa---aacaaca------acaaCCATTTACAGACAGAAAAGAAATAGAGCTAA-----TAAGCTAAGGAAAGATGTagaaatgtgac----aagtaaagtaatatgaggtcttttaccaatttaaaa-----aaacaaaaaatgac--attaaattgtaataccctgtgctggcaaagatgcagtgaaatgggcactttcttatactac-gaggggtgtttaaattgaatataagccttCCAGGGTAAAGCTTGACaattttttaaaataatagagacagggtctcaccatactgccaaactgcctcctccaactcttggcatcaagcaatccttctggcttag----cctcc---------caaagtgctgagattatagctgggaggcacGCAAAACtttgtcaattgacatcaagggtaatgagaatgtccattcaccatgacttacagtaatcttacttctgcaaataccttggggagacaattcaaTCTAAAC-AAAGGTCATCTGTACAAACACAGTGAAAATCTGGGAGTAACGGAAGACAGAGTGGTTAAGTGAAATAAGAAACAGTTATAAGAAATTAAACCATGGTATTAACAGGCAACTGG--TAAAAGCTCAGTTGATGTTAGCTGCTACttttttgttgttatgagacagtgtctcactctgtcacccaggctggagtgcagaggcttgatcatgactcactgcagtctcagcctccctgggctcaagcgatcctcccacctcagcctcccaagtagctgggactacaggaacatgccaccacactaggctaattcatgtatttttctgtagggatggtgacg--c---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127685366 1672 - 192294377 cgtgctcctatgagaatctaatgctgctgctgacctgagagaaggtggagctcaggcgggaatgtgagcaaagcggagtggctgtaaatacagatgaagct--------tccctcactcactaccactcacctcctgttgtgtggctccttacagctccatggctcaggggttggggacccccgCTCAAGTGCATCCAAAAGGACCCTTCCCACACCAGTCTTCATAGCGGTCAACTGCAGCAACCACTTA----------------------------GCTCCCAAGGCATGTGCCTCAGTTGGCAT-TTCATCA-----CAATCAACAGTAAGTGGTAGCTTGAGTCACTGTGAGGTCACTTACCGGAAATCACCGGCATCCCATTTCCCATTGGCAAGGAGCTCAGCACTGTCCCTTGGAAAATCAAACCTATGCCCAAATCCCACCTGTGTGAGTTTATCTCCTGGGACCCTTCCGAGCAta-----ttagtcagagtccaatcaggagacaaaaaccactcaaaagtttaaagtg-gtaaaatttaatccagagaattattcattgtaacaggggaacagcataatgagagattg-gctagcacaaagtaaagagaactctagaaaaatcaggactagcCCAggccaggcatggtggctcatacccaaaattccagcaatttgagaagctaacacaggaggactgcttaaggccaggagctagagaccggtctggacaacacagtgagaccctgtctctatccaaaaaaagaaaaaaattagctgggagtggtggtacacacttgtagtctcagctactcaggaagctga-----------agtttgagcctgggagatcaaggctgcagtgagtcatgattatgccactacagtcaagcctgggtgacagagcaagaccctgtctc-----aaagaa---------caaaaca------acaaCCATTTACAGACAGAAAAGAAATAGAGCTAA-----TAAGCTAAGGAAAGATGTagaaatgtgac----aagtaaagtaatatgaggtgttttaccaatttaaaat----aaacaaaaaatgac--attaaattgtaataccctgtgctggcaaagatgcagtgaaatgggcactttcttatactac-gaggggtgtttaaattgaatataagccttCCAGGGTAAAGCTTGACaattttttaaaataatagagacagggtctcaccatactgccaaactgcctcctccaactcttggcatcaagcaatccttctggcttag----cctcc---------caaagtgctgagattatagctgggaggcacGCAAAACtttgtcaattgacatcaagggtaatgagaatgtccattcaccatgacttacagtaatcttacttctgcaaataccttggggagacaattcaaTCTAAAC-AAAGGTCATCTGTACAAACACAGTGAAAATCTGGGAGTAACGGAAGACAGAGTGGTTAAGTGAAATAAGAAACAGTTATAAGAAATTAAACCATGGTATTAACAGGCAACTGG--TAAAAGCTCAGTTGATGTTAGCTGCTACttttttgttgttatgagacagtgtctcactctgtcacccaggctggagtgcagaggcttgatcatgactcactgcagtctcagcctccctgggctcaagcgatcctcccacctcagcctcccaagtagctgggactacaggaacatgccaccacactaggctaattcatgtatttttctgtagggatggtgacg--c---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8931902 1680 - 10413719 catgctcctatgagaatctaatgctgctgctgacctgagagaaggtggagctcaggcgggaatgtgagcaaaggggagtggctgtaaatacagatgcagct--------tcccttactcgacaccactcacctcctgctgtgtggctccttatagctccatggctcaggggttggggacccctgCTGATGTACATCCAAAAGGACCGTTCCCACAACAGTCTTCATAGCGGTCAAGTGCAGTAACCACTTA----------------------------GCTCCCAAGGCATGTGCCTCAGCTGGCAT-TTCATCA-----CAATCAATAGTAAGTGGTAGCTTGAGTCACTGTGAGGTCACTTTCTGGAAATCACCAGCATCCCATTTTCCACTGGCAAGGAGCTCAGTATAGTCCCTTGGATAACCAAACTCATGTCCAAATCCCATCTATGTGAGTCTATCTCCAGGGACCCTTCTTAGCAta-----tcagt----gtctaatcaggagatgtaaaccactcaaaaatttaaagtgtgtaaaatttaatacagagaattattcattataacaggggaacaacataatgagagactg-gctagcacaaagtaaagagaactctagagaatgtaggactagcCCTggtcaggcatggtggctcatgcctgaaattccagcaatttaagaagccaacccaggaggactgcttgaggccagaagctagaggctggcctggacaacacagtgagaccctgtctctattcaaaaaaagaaaaaaattagctgggagtggtggtgcacacttgtagtcccagctcctcaggaagctgaagcaaaaggatagtttgatcctgggaggtcaaggctgcagtaagtcatgattatgacactagagtcaagcctgggggacagagcaagaccctgcctc-----aaacaaaaCCAC---CACCATA------ACAACCATTTACAGACAGAAAAGAAATAGAGCTAA-----TAAGCTAAGGAAAGATGTTGAAATGTGAC--------AAAGTAATATGAGGTCTTTTATCTATTTAAAATAATCAAACAAAAAATAACTTATTaaattataataccctgtgctggcaaaggtgcagtgaaatggactccttcttatactat-gaggggtgtttaaattgtacctaagccttccagggtaaAgcttggcaattttttaaaataatagagacagggtcttacttt--------actgcctcctccaactcttggcctcaagcaatcctcctgccttag----ccttc---------caaaatgctgggattatagccaggaggtaccCAAAACCttgtcaatttatatcaagggcaatgagaatgtccattcaccatgactcacagtaatctcacttctggaaatacctt-gggagacaattcaatctaaacaaaaggtcatctgcataaaCACGGTGAAATTCTGGGAGTAATCGAAGACAGAGTGGTTAAGTGAAATAAGAAACAGTTATAAGAAATTATATTATGGTATTTATAGGCACCTAG--TAAAAGGTCAGTTCATGTTAGCTGCTACttttttgttgttttgagacagggtctcactctgtcacccaggcaggagtgcagaggcctgatcatgactcactacagtctcaacctccctgggctcaagtgatcctcccacagctgcttcccaagtagctgagactacaggaacatgccaccacactaggctaattcatgtatttttctgtagggatggtgatt--c---- i macNem1.NW_012013022v1 C 0 C 0 s chlSab2.chr21 124142176 1673 - 127223203 cgtgctcctatgagaatctaatgctgctgctgacctgagagaaggtggagctcaggcgggaatgtgagcaaaggggagtggctgtaaatacagatgaagct--------tccctcactcgataccactcacctgctgttgtgtggctccttacagctccatggctcaggggttggggacccctgCTCAAGTGCATCCAAAAGGACCCTTCCCACACCAGTCTTCATAGCGGTCAAGTGCAGCAACCACTTA----------------------------GCTCCCAAGGCATGTGCCTCAGTTGGCAT-TTCATCA-----CAATCAACAGTAAGTGGTAGCTTGAGTCACTGTGAGGTCACTTACCGGAAATCACCAGTATCCCATTTCCCATTGGCAAGGAGCTCAGCACTGTCCCTTGGAAAATCAAACCTATGCCCAAATCCCATCTGTGTGAGTTTATCTCCCGGGACCCTTCCGAGtata-----ttagtcagagtccaatcaggagacataaaccactcaaaagtttaaagtg-gtaaaatttaatccagagaattattcattgtaacaggggaacagcataatgagagattg-gctagcacaaagtaaagagaactctagagaaatcaggactagcCCAggccaggcatggtggctcatacccaaaattccagcaatttgagaagctaacgcaggaggactgcttaaggccaggagctagagaccggtctggacaacacagtgagtccctgtctctatccaaaaaaagaaaaaacttagctgggagtggtggtgcacacttgtagtctcagctactcaggaagctga-----------agtttgagcctgggagatcaaggctgcagtgagtcatgattatgccactacagtcaagcctgggtgacagagcaagaccctgtctc-----aaagaa---caa---aacaaca------acaaCCGTTTACAGACAGAAAAGAAATAGAGCTAA-----TAAGCTAAGGAAAGATGTAGAAATGTGAC----AAGTAAAGTAATATGAGGTCTTTTACCAATTTAAAAT----AAACAAAAAATGAC--ATTAAATTATAAGACCCTGTGCTGGCAAAGATGCAGTGAAATGGGCACTTTCTTATACTAT-GAGGGGTGTTTAAATTGTATATAAGGCTTCCAGGGTAAAGCTTGACaattttttaaaataatagagacagggtctcaccatactgccaaactgcctcctccaactcttggcatcaagcaatcctcctgtcttag----cctcc---------caaagtgctgagattatagctgggaggcacccaaaaccttgtcaatttACatcaagggtaatgagaatgtccattcaccatgactcacagtaatcttacttctgcaaataccttggggagacaattcaatctaaac-aaaggtcatctgcacaa--aCAGTGAAAATCTGGGAGTAACGGAAGACAGAGTGGTTAAGTGAAATAAGAAACAGTTATAAGAAATTAAACCATGGTATTAACAGGCAACTGG--TAAAAGGTCAGTTGATGTTAGCTGCTACttttttgttgttttgagacagggtctcactctgtcacccaggctggagtgcagaggcctgatcatgactcactgcagtctcagcctccctgggctcaagcgatcctcccacctcagcctcccaagtagctgggactacaggaacatgccaccacactaggctaattcatgtatttttctgtagggatggtgact--c---- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 33735 1679 - 148006 tgtgctcctatgagaatctaatgctgctgctgacctgagggaaggtggagctcaggcaggaatgtgagcaaaggggagtggctgtaaatacagatgaagct--------tccctcactcgataccactcacctcctgttgtgtggctccttacagctccatggctcagggattggggacccGGGCTTAAGTGCATCCAAAAGCACCCTTCCCACACCAGTCTTCATAGCGGTCAAGTGCAGCAACCACTTA----------------------------GCTCCCAAGGCATGTGCCTCAGTTGGCAT-TTCATCA-----CAATCAACAGTAAGTGGTAGCTTGAGTCACTGTGTGGTCACTTACCGGAAATCACCAGCATCCCATTTCCCATTGGCAAGGAGCTCGGCACTGTCCCTTGGAAAACCAAACTTATGCCCAAATCCCATCTGTGTGGGTTTATCTCCCAGGACGCTTTCGAGCAta-----ttagtcagagtacaatcaggagacataaatcactcaaaagtttaaagtg-gtaaaatttaatccagagaattattcattgtaacaggggaacagcataatgagagattatgctagcccaaagtaaagagaactctagagaaatcaggacta-CCCAggccaggcatggtggctcatacccaaaattctagcaatttgagaagctaacacaggaggactgcttaaggccaggagctagagaccggtctggacaacacagtgagaccctgtctctattcaaaaaaagaaaaaacttagctgggagtggtggtgcacacttgtagtctcagctactcaggaagctga-----------agtttgagcctgggagatcaaggttgcagtgagtcatgattatgccactacagtcaagcctgggtgacagagcaagaccctgtctc-----aaagaa---caaaacaacaaca------acaaCCATTTACAGACAGAAAAGGAATAGAGCTAA-----TAAGCTAAGGAAAGATGTagaaatgtgac----aagtaaagtaatatgaggtcttttaccaatttaaaat----aaacaaaaaatgac--attaaattataataccctgtgctggcaaagatgcagtgaaatgggcactttcttatattat-gaggggtgtttaaattgtatataagccttccagggtaaagcttgacaatTTTTTAAAATAAtagagacaaggtctcaccatactgccaaactgcctcctccaactcttgacatcaagcaatcctcctgtcttag----cctcc---------caaagtgctgagattatagctgggaggcaccCAAAACCttgtcaatttacatcacgggtaatgagaatgtccattcaccatgactcacagtaatgttacttctgcaaataccttggggagacaattcaatctaaacaaaaggtcatctgcacaaaCACAGTGAAAATCTGGGAGTAACTGAAGACAGAGTGGTTAAGTGAAATAAGAAACAGTTATAAGAAATTACACCATGGTATTAACAGGCAACTGG--TAAAAGGTCAGTTGATGTTAGCTGCTACttttttgttgttttgagacagtgtctcactctgccacccaggctcgagtgcagaggcctgatcatgactcactgcagtctcagcctccctgggctcaagcgatcctcccacctcagcctcccaagtagctgggactacaggaacatgccaccacactaggataattcatgcatttttctgtagggatggtgact--c---- i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 742219 1678 + 1536524 catgctcctatgagaatctaatgctgctgctgatctgagagaaggcggaggtcaggtgggaatatgagcaatggggagtggctgtaaatacagatgcagct--------tcccttactggacaccactcacctcctgctgtgtggctccttatagctccatggctcaggtgttggggacccctgCTGATGTACATCCAAAAGGACCGTTCCCACAACAGTCTTCATAGCGGTCAAGTGCAGTAACCACTTA----------------------------GCTCCCAAGGCATGTGCCTCAGTTGGCAT-TTCATCA-----CAATCAACAGTAAGTGGTAGCTTGAGTCACTGTGAGGTCACTTTCTGGAAATCACCAGCATCCCATTTTCCCATGGCAAGGAGCTCAGTATAGTCCCTTGGATAACCAAACCCATGTCCAAATCCCATCTGTGTGAGTCTATCTCCAGGGAC-CTTCTTAGCgta---------tcagagtccaatcaggagacataaaccactcaaaaatttaaagtg-gtaaaatttaatacagagaattattcattagaacaggggaacaacataatgagagactg-gctagcacaaagtaaagagaactctagagaatataggactagcCCTggtcaggcatggtggctcatgcctgaaattccagcaatttaagaagccaacacaggaggactgcttgaggccagaagttagaggccggcctggacaacatagtgaaaccctgtctctatccaaaaaaagaataaaattagctgggagtggtggtgcacacttgtagtcccagctcctcaggaagctgaagcaaaaggatagtttgatcctgggaggttaaggctgcagtgagtcatgattatgccactacagtcaagcctgggggacaaagcaagaccctgcctc-----aaacaaaaCCAC---CACCACA------ATAACCATTTACAGACAGAAAAGAAATAGAGCTAA-----TAAGCTAAGGAAAGATGTTgaaatgtgac--------aaagtaatatgaggtcttttatctatttaaaataatcaaacaaaaaatgacttattaaattataataccctgtgctggcaaaggtgcagtgaaatgggcactttcttatactat-aaggggtgtttaaattgtatataagccttccagggtaaAGCTTGTCaattttttaaaataatagagacagggtctcacctt--------actgcctcctccaactcttggcctcaagcaatcctcctgccttag----cctcc---------caaagtgctgggattatagccaggagacaccCAAAACCttgtcaatttacatcaagggtaatgagaatgtccattcaccatgactcacagtaatctcacttctggaaatacctt-gggagacaattcaatctaaacaaaaggtcatctgcataaaCACGGTGAAATTCTGGGAGTAATCGAAGACACAGTGGTTAAATGAAATAAGAAACAGTTATAAGAAATTATATTATGGTATTTACAGGCACCTGA--TAAAAGGTCAGTTCATGTTAGCTGCTACttttttgttgttttgagacagggtctcactctgtcacccaggcaggagtgcagaggcctgatcatgactcattacagtctcaacctccctgggctcaagtgatcctcccacagcagcttcccaagtagctgagactacaggaacatgccaccacactaggctaattcatgtatttttctgtagggatggtgtct--c---- i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1422348 1614 + 204313951 catgctcctaagacaatctaatgttgctgctgatctgagagaaggcagagctcaggcaggaatgtga------------------------------agct--------tccctcactagacatcactcacctcctgctgtgtggctccttacagctccatggctccgggtttggggacctctgCTCAAGTACATTCAAAAGGACCCTTTCCACCCCAGTCATTACAGTGGTCAAGTGCAACAACCACTTA----------------------------GCTCCCAAAGCATGGGCCTCAGCTGGCAT-TTCATCA-----CAATCGACAGTAAGTGGTAGCTTGAGTC---ATAAGGTCCCTCCTC-GAAATCAGCAGTGTCCCATTTCCCATTGGCAAGGAGCTTGGCACTGCCCCTTGGAAAACCAAACCTATGCCCGAATCCCATCTGTGTGGGTCTATCTCCTGGGACCCTTCCTAGAATCAGCTCTGTAATAgagtgcaatcaggagacataaaccactcaaaagtttaaagtg-gtaaaatttaatat-gagaattattcattataacgggggagcagcataatgagagattg-gctagcacaaagtaaagag--ctctagagaatataggactggtcaatgccaggcatggtggctcatgcctgaaattccagcaacctaacaggacaatacaggaggactg-ctgaggccaggagctagagaccggcctgggcagcagagcgagaccctgtctctatccacaaaaagaaaaaacttggctgggtgtggaggtgcacacttgtagtcccagctactcaggaagctggagagggagggtagtttgagcctgggaggtcaaggctgcagtgagtcatgattatgccactacagtcaagcctgggtgacagagcaagaccctgtctc-------agaa---caa---aataaca---aggacaaccatttacaggcagagaa---atagagcTAATAAGCTAAGCTAAGGAAAGGTGTTgaaatgtgacaaataaataaagcaa-atgaggt-ttttatctatttaaaataat-------aaagtaacttattaaagtataataccatgtgctgggaaaggtacggtgaagtgggcactttcttatactgt-gggggatgtttaaattgtacataatccttccaaggtaaagctcagcaattgttttaagTAATAGAGACAGTGTCTCACCATactgc---------------------tggcctcaagcaatcctcctgccttagcctccctccctccttaggcttagtgccgggattatagctgggaggcaccCAACACCTTGTCAATTTACATCAAGGGCAATGAGAATGTCCATTCACCGTGACTCACAGTACTCTCACTTCTGAAAATACCTT-GGGAGACAATTCAACCTAAACCAAAAGTCATCTGCACAA--ACACTGAAAATCTGGGAGTAATTTCAGACAG----GTTAAGTGAAAT---AAACAGTTATAAGAAATTGAATTAGGGTATTTTTAGGCCCCTGG--TGAAAGAGCAGTTAGTGTTAGCTGCTGGttttttgttgttttgagacagggtctcactctgtcacccaggctggagtgcagaggcctgattatgactcactgcagtctcagcctccctggactcaagc--------------------------agctgggactacaggcacatgccaccacgctaggctaattcatgtatttttccactggggtagtgact--c---- i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 166556 1605 + 13147851 catgctcctaagagaatctaatgctgttgctgatctgagagaaggcagagctcaggcaggaatgtga------------------------------agct--------tccctcactagacatcactcacctcttgctgtgtggctacttacagttccatggctcagggtttgggggcctctgCTCAAGTACCTCCAAAAGGACCCTTCCCACACCAGTCATTATAGTGGTCAAGTGCAGCAACCACTTA----------------------------GCTCCCAAAGCATGGGCCTCAGCTGGCAT-TTCATCA-----CAATCAACAGTAAGTGGTAGCTTAAGTCATGATAAGGTCACTCCCC-AAAATCACCAGCATCTCATTTCCCATTGGCAAGGAGCTCAGCACTGCCCCTTGGATAACCAAACCTATGCCC-AATCCCATCTGCGTGGGCCTATCTCCTGGGATCCTTCCTAGCATCAACTCTGTATTAGAGCAcaatcaggagacataaaccactcaaaagtttgaagtg-gtaaaatttaatatagagaattattcatgataacagggga-cagcataatgagagactg-gctagcacaaagtaaagagaactctgcagaatacaggactggcCAAggccaggcatggtggctcgtgcctgaaattccagcaaattaacaggccaatacaggaggattgcctgaggccaggagctagagactggcctaggcaacacagcgagaccctgtctccatccac-aaaaggaaaaacttagctgggtgtgcaggggtacacctgtagtcgcatctactcaggaagctcaagagggagggtagtttgagcctgggaggtcaaggctgcagtgagtcatgatgatgccactatagtcaagcctgggtgacagagcaagaccctgtctc-----aaagaa---caa---aataaca---aaGACAACCATTTACAGACAGAAAA---ATAAAGCTAA-----TAAGCTAAGGAAAGGCATTgaaatgtgac----aaataaagcaacatgaggtcttttatctatttaaaataat-------aaaata----attaaagtataataccatgtgctgggaaaggtacagtgaaatgggcactttcttatactat-ggggggtgtttaaattgtatataatccttcCAAGGTAAAgctcggcaattttcttaaataacagaggcagagtctcaccatactgc---------------------tggcctcaagcaatcctcctgccttag----cctcctcccttagccttagtgctgggattatagctggaaggcaccCAAAACCttgtcagtatatatcaagggcaatgagaatgtccattcaccgtgactcaaagtcaactcacttctggaaatacctt-gggagacaattcaatctaaaccaaaggtcgtctgcacaa--aCAGTGAACATCTGGGAGTAATTTAAGACAG----GTTAAGTGAAAT---AAACAGTTATAAGAAATTGAACTATGGTATTTACAGGCCCCTGG--TAAAAGATCAGTTAATGTTAGCTGCTAGttttttgttgttttgagacagggtctcactctgtcacccaggctggagtgcagaggcctgattatgactcactgcagtctcagcctctgtggactcaagc--------------------------agcagggactacaggcacatgccaccacactaggctaactcatgcatgtttcagttaggatagtgact--c---- i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 282774 1617 + 373793 tg---ttctaagagaatctaatgctgctgctgatctgagagaaggcagagctcaggcgggaatgtga------------------------------agct--------tccctcactggacatcactcacctcctgctgtgtggctccttacagctccatggctcagggtttggggacctctgCTCAAGTACATCCAAAAGGACCCTTTCCACACCAGCCATTATAGCGGTCAAGTGCAGCAACCACTTA----------------------------GCTCCCAGAGCATGGGCCTCAGCTGGCAT-TTCATCA-----CAATCAACAGTAAGTGGTAGCTTGAGTCATGATAAGGTCACTCCCT-GAAATCACCAGCATCCCATTTCCCATAGGCAAGGAGCTCAGCACTGCCCCTTGGATAACCAAACCTGTGCCCAAATCCCATCTGCGTGGGTCTATCTCCTGGGACCCTTCCTAGCATCAACTCtgtattagagtgcaaacaggagacataaaccactcaaaagtttaaagtg-gtaaaatttaatatagagaattattcattataacaggggaacagcataatgagagatca-gctagcacaaagtaaagggaactctagagaatacaggactggcCAAggccaggcatggtggctcatgcttgaaattccagcaacttaacaggccagtacaggaggattgcttgaggccaggagctagagacctgcctgggcagcatagcaagaccctgtctatatccacaaaaagaaaaaacttagctgggtgtggaggtgcacacttgtggtcccagctactcaggaagctgaagagggagggtagtttgagcctgggacgtcaaggctgcagtgagtcatgattatgccactacaatcaagcctgagtaacagagcaagaccctgtctc-----aaagaa---caa---aataaca---aaGACAACCATTTACAGACAGAAAA---ATAAAGCTAATAAGCTAAGATAAGGAAAAACATTGAAATATGAcaaataaataaagcaacatgaggtcttttatctatttaaaataat-------aaaataacctattaaagtataatatcatgtgctggtaaaggtacagtgaaatgggcactttcttatactatgggggggtgtttaaattgtatataacccttcCAAGGTAAAgcttggcaatttttttaagtaatagagacagtgtctcaccatactgc---------------------tggcctcaagcaatcctcctgccttag----cctccctccataggcttagtgctgagattatagctgggaggcaccCAAAACCttgtcaatttatatcaagggcaatgagaatgac----caccataactcacagtaatctcacttctggaaatacctt-gggagacaattcaaTCTAAACCAAAGGTCAACTGCACAA--ACAGTGAAAATCTGGGAGTAATTTAAGACAG----GTTAAGTGAAAT---AAACAGTTATAATAAATTGAACTATGATATTTATAGGCCCCTGG--TAAAAGATCAGTTAATGTTAGCTGCTAGttttttgttgttttgagacagggtctcactctgtcacccaggctggagtgcagaggcctgattatggctcactgcagtctcagccttcctggattcaagt--------------------------agctggggctacaggcacatgccaccacactaggctaattcatgtagttttccatcgggatagtgact--ctc-- i cebCap1.NW_016108107v1 C 0 I 27 s aotNan1.NW_018487315v1 6187827 1617 - 15679484 cgtgctcctaagagaatctaatgctgctgcttatctgagagagggcagagctcaggcaggaatgtga------------------------------agcc--------tccctcactagacatcactcactttctgctgtgtggctccttacagctccatggctctgggttt-gggacctctgCTCAAGTACTTCCAAAAGGACCCTTTCCACACCAGTcattacagtggtcaagtgcagcaaccactta----------------------------gctcccaaagcatgggcctcagctggcat-ttcatca-----caatcaacagtaagtggtagcctgagtcacgataaggtcacgccct-gaaatcaccagcatcccatttcccattggcaaggagctcagcactgcctcttggataaccaaacctatgcccaaatcccatctgtgtgggtctatctcctgggacccttcctagcatcaatTCTGTATTAGAGCAcaatcaggagacataaaccacacaaaagtttaaagtg-gtaaaatttaata--gagaattattcattataacaggggaacagcataatgagagattg-gctagcacaaagtaaagagaactctagagaatataggactagcCAAggccaggcatggtggctcatgcctgaaattccagcaacttaacaggccaatacaggaagattgcttgaggccaggagctagagaccagcctgggcagcatagcaagaccctgtctctatccacaaaaagaaaaaacttagctgggtgtggaggtgcacacttgtagtcccagctactcaggaagctgaagagggagggtagtttgagcctgggaggtcaaggc--atgtaagtcatgattatgccactacagtcaagcctgggtgacagaacaagaccctttttc-----aaagaa---caa---aataaca---aaGACAACCATTTACAGACAGAAAA---ATAGAGCTAATAAGCTAAGATAAGGAAAGGTGTTGAAATGTGACAAATAAATAAAGCAACATGAGGTCTTTTATCTATTTAAAATAAT-------AAAATAACA-ATTAAAGTGtaataccatgtgctgggaaaggtacagtgaaatgggcactttcttatactat-ggggggtgtttaaattgTATATAATCCTTCCAAGGTAAAgctcggcaattttttaaaataatagagacagtgtctcaccatactgc---------------------tggcctcaagcaatcctcctgccttag----cctccttccttagccttagtgctgggattatagctgggaggcaccCAAAACCttgtcaatttatatcaagggcaatgagaatgtccattcactgtgactcacagtaatctcacttctggaaatacctt-gggagacaattcaatctaaaccaaaggtcatctgcacaa--aCAGTGAAAATCTGGGAGTAATTTAAGACAG----GTTAAGTGAAAT---AAACAGTTATAAGAAATTGAACTATGGTATTTATAGGCCCCTGG--TAAAAGATCAGTTAATGTTAGCTGCTAGttttttgttgttttgagacagggtctcactctgtcacccaggctggagtgcagaggcctgattatgactcactgcagtctcagcctccctggtctcaagc--------------------------agctgggactacaggcacatgccactacactaggctaattcatgtatttttccgttggaatagtgact--c--cc i aotNan1.NW_018487315v1 C 0 C 0 e cerAty1.NW_012005081v1 29893 2109 - 113584 I a score=197505.000000 s hg38.chr3_KI270784v1_alt 19012 31 + 184404 cctttgtttccaaggcctatcgcaaactctt s panTro5.chr1 222300476 31 + 228573443 cctttgtttccaaggcctatcgcaaactctt i panTro5.chr1 C 0 C 0 s panPan2.chr7 56712642 31 + 162613886 ctttggtttccgaggcctgtctcaaactctt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4216785 31 + 4392246 cctttgtttccaaggcctatcgcaaactctt i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46787654 31 - 99891981 tctttgtttccgaggcctgtctcaaactctt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55092910 31 + 185818997 cctttgtttccaaggcctgtctcaaactctt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127687038 31 - 192294377 cctttgtttccaaggcctgtctcaaactctt i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8933582 31 - 10413719 ctttggtttccaaatcctgtctgaaactctt i macNem1.NW_012013022v1 C 0 C 0 s chlSab2.chr21 124143849 31 - 127223203 cctttgtttccaaggcctgtctcaaactctt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 35414 31 - 148006 cctttgtttctaaggcctgtctcaaactctt i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 743897 31 + 1536524 ctttggtttccaaatcctgtctgaaactctt i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1423962 31 + 204313951 cctttgtcaatgaggcctgtctcagactctt i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 168161 31 + 13147851 cctttgtcactgaggcctgtctcagattctt i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6189444 29 - 15679484 --tttgtcactgaggcctgtctcagactctt i aotNan1.NW_018487315v1 C 0 C 0 e cebCap1.NW_016108107v1 284391 27 + 373793 I e cerAty1.NW_012005081v1 29893 2109 - 113584 I a score=1389816.000000 s hg38.chr3_KI270784v1_alt 19043 198 + 184404 ggcctc-aagccat-cctcctgcctcagcctcccaaagtgttgcgattaccagtgtgagccaccacacctggccAGCTGCTACTTTTATCAATA---TTATTCTTATTCCACTCA----------------ATTA----------------AAAATTATTATTTTCAAGGCTATGCAACAGTATGTATCCTACAGCGTAATTGTAAAAACATACACAGTCgtcatccctcagtat s panTro5.chr1 222300507 186 + 228573443 ggcctc-aagccatccctcctgcctcagcctcccaaagtgttgcgattaccagtgtgagccaccacacctggccAGCTGCTACTTTTATCAGTA---------TTATTCCACTC--------------------A----------------AAAATTATTATTTTCAAGGCTATGCAACAGTATGTATCCTACAGCGTAATTGTAAAAACATATAcagtcg---tccctcagtat i panTro5.chr1 C 0 C 0 s panPan2.chr7 56712673 202 + 162613886 ggcctc-aagccat-cctcctacctcagcctccgaaagtgttgtgattactggtgtgagccaccacacctggccAGCTGCTACTTTTATTA------------TTATTCCTCTCAATTAAAAATAATTTTCATTA----------------AAAATTATCATTTTCAAGGCTATGGAACAATATGTGTCATACAGCATAATTGTAAAAACATATAcagtca---tccctcggtat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4216816 201 + 4392246 ggcctc-aagccat-cctcctgcctcagcctcccaaagtgttgtgattaccagtgtgagccaccacacctggccAGCTGCTACTTTTAGCAATATTATTATTATTATTCCACTCA----------------ATTA----------------AAAATTATTATTTTCAAGGCTACGCAACAGTATGTATCCTACAGCGTAATTGTAAAAACATATACAGTCgccgtccctcagtat i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46787685 209 - 99891981 ggcctcaaagccat-cctcctgcctcagcctcccaaagtgttgtgattaccggtgtgagccaccacactcggccAGCTGCTACTTTTATCAATA---TTATTATTATTCCACTCAATTAAAATTATTTGTCATTA----------------AAGATTATTATTTTCAAGGCTATGAAACA--ATGTGTCCTGCAGCATAATTGT-AAAACATATAcagtcg---tccctcagtat i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55092941 195 + 185818997 ggcctc-aagccat-cctcctgcctcagcctcccaaagtgttgtgattactggtgtaagccaccacacctggccAGATGCTACTTTTATCAATA---TTATCATTACTCCACTCA----------------GTTA----------------AAAATTATTATTTTCAAGGCTATGTAATACTATGTGTCCTACAGCATAATTGTAAAAACATATAcagtcg---tccctcggtat i rheMac8.chr3 C 0 I 4 s macFas5.chr3 127687069 195 - 192294377 ggcctc-aagccat-cctcctgcctcagcctcccaaagtgttgtgattactggtgtaagccaccacacctggccAGATGCTACTTTTATCAATA---TTATCATTACTCCACTCA----------------GTTA----------------AAAATTATTATTTTCAAGGCTATGTAATACTATGTGTCCTACAGCATAATTGTAAAAACATATAcagtcg---tccctcggtat i macFas5.chr3 C 0 I 4 s macNem1.NW_012013022v1 8933613 201 - 10413719 ggcctc-aagccac-cctcctacctcagcctcccaaagtgttgtgattaccggtgtgagccaccacacctgtccAGCTGCTACTTttat---ta---ttattattattCCACTCA----------------AATAA-------TTTTCATTAAAATTATCATTTTCAAGGTTATGGAACAATATGTGCCCTACAGCATAATTGTAAAAATATATAcagtca---tccctcagtat i macNem1.NW_012013022v1 C 0 I 4 s chlSab2.chr21 124143880 195 - 127223203 ggcctc-aagccat-cctcctgcctcagcctcccaaagtgttgtgattactggtgtaagccaccacacctggccAGCTGCTACTTTTATCAATA---TTATTATTACTCCACTCA----------------GTTA----------------AAAATTCTTATTTTCAAGGCTATGTAACAGTATGTGTCCTACAGCATAATTGTAAAAACATATAcagtcg---tccctcggtat i chlSab2.chr21 C 0 I 4 s manLeu1.NW_012100344v1 35445 192 - 148006 ggcttc-aagccat-cctcctgcctcagcctcccaagg---tgtgattactggtgtaagccaccacacctggccAGCTGCTACTTTTATCAATA---TTATTATTATTCCACTCA----------------GTTA----------------AAAATTATTATTTTCAAGGCTCCGTAACAGTATGTGTCCTACAGCATAATTGTAAAAACACATAcagtca---tccctcggtat i manLeu1.NW_012100344v1 C 0 I 4 s colAng1.NW_012116633v1 743928 207 + 1536524 ggcctc-aagccat-cctcctacctcagcctcccaaagtgttgtgattactggtgtgagccaccacacctgtccAGCTGCTACTTttat---ta---ttattattattCCACTCA----------------ATTAAAAA-TAGTTTTCATTAAAATTATCATTTTCAAGGCTATGGAACAATATGTGTCCTACAGCATAATTGTAAAAACATATAcagtcg---tccctcagtat i colAng1.NW_012116633v1 C 0 I 4 s calJac3.chr2 1423993 207 + 204313951 ggcctc-aggccat-cctcctgcctcagcctcccaaagtgttgtgattaccggtgtcagccaccacatttggccAGCTGCttttt----aaaaa---ttattattattCGACTCA----------------ATTAAAACATATTTGGTACTAACACTATCATTTTCAAGGCTATGGAACAATACGTGTCCTCCAGCATAACTGTAAGAACATCTAcagtca---cccctcagtgt i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 168192 203 + 13147851 ggcctc-aggccat-cctcctgcctcagccacccaaagtgttgtgactaccggtgtgagccaccacacctggccAGCTGCTTTTT--------T---TTATTATTATTCCACTCA----------------ATTAAAAATTATTTGGCCTTAAAACTATCATTTTGAAGGCTATGGAACAATATGTGTCCTACAGCATACTTGTAAAAACATCTAcagtca---gccctcagtat i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 284418 192 + 373793 agcctt-aggccat-catcctgcctcagcctcccaatgtgttgtgactactggtgtgagccaccacacctggccAGCTGCTTTTC---------------CTATTATTCCACTCA----------------AT-------TATTTGGCCTTAAAACTATCATTTTCAAGGCTATGGAACAATATGTGTCCTCCAGCATAATTGTAAAAACATCTAcagtca---tccctcagtat i cebCap1.NW_016108107v1 I 27 C 0 s aotNan1.NW_018487315v1 6189473 204 - 15679484 ggcctc-aggctat-cctcctgcctcagcctcccaaagtgttgtgattgccggtgtgagccaccacacctggccAGCTGCTTTTT-------TT---TTTTCATTATTCGACTCA----------------ATTAAAAATTATTTGGCATTAAAACTATCATTTTCAAGGCTATGGAACAATATGGGTCCTCCAGCATAATTGTAAAAACATCTAcaatca---tcccttagtat i aotNan1.NW_018487315v1 C 0 C 0 e cerAty1.NW_012005081v1 29893 2109 - 113584 I a score=2307820.000000 s hg38.chr3_KI270784v1_alt 19241 259 + 184404 ----acaga----attagttccagcccccc-atctctgcatataccaaaatccatgcttactcacgtttcgctgtcacccctctagaatccacgtatacgaaaattccaaatgttagttgggcatagtggcaagcacctgtagtctcagccacgtgggaggttgaggtgggaggatcgcttcagcctgga--aggttgaggctgcagtcagctgcgatagcactactacactccagccttggacaacagagggagaccctgtctcagaaa s panTro5.chr1 222300693 259 + 228573443 ----acaga----attagtcccagcccccc-atctctgcatataccaaaatccatgcttactcacgtttcgctgtcacccctctggaatccacgtaCacaaaaattccaaatattagttgggcatagtggcaagcacctgtagtctcagccacgtgggaggttgagatgggaggattgcttcagcctgga--aggttgaggctgcagtcagctgtgatagcactactacattccagccttggacaacagagggagaccctgtctcagaaa i panTro5.chr1 C 0 C 0 s panPan2.chr7 56712875 262 + 162613886 ----acagagaggattagttccagcccccc-atctctgcgtataccaaaatccatgcatactcacatttcacagtcagccctctggaacccacatataGGaaaagtccaaatattagttgggcacagtaccaagcacctatagtctcagccacgtaggaggctgaggtgggaggatcgcttgaacctggg--aggttgaggctgcagtcagctgtgatggcaccactacactccagcc-tggacaatagagcaagaccctgtgtcagaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4217017 259 + 4392246 ----acaga----attagttccagcccccc-atctctgcatataccaaaatccatgcttactcacgtttcgctgtcacccctctggaatccacgtatacgaaaattccaaatattagttgggcatagtggcaagcacctgtagtctcagccacgtgggaggttgaggtgggaggatcgcttcagcctgga--aggttgaggctgcagtcagctgcgatagcactactacactccagccttggacaacagagtgagaccctgtctcagaga i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46787894 263 - 99891981 ----acagagagcattagttccagcccccc-atctctgcttataccaaaatccatgcttactcacgtttcgctgtcacccctctggaacccacatataGGaaaattccaaatattagttgggcatagtggcaagcaactatagtctcagccacgtgggaggttgagatggaaggatcgcttgagcctgga--aggttgaggctgcagtcagctgtgatagcactactacactccagccttggacaacagagcgagaccctgtctcagaaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55093140 258 + 185818997 ----acaga----attagttccagcccccc-atctctgcatataccaaaatccatgctgactcacgtttcgccgtcacccctctggaacccacgtataGGaaaattccaaatatgagttgggcatagtggcaagcacctatagtctcagccacgtgggaggctgagacgggaggattgcttgagcctggg--aggttgaggctgcagtcaactgtgatagcactactacactccagac-tggacaacggaacgagactctgtctcagaaa i rheMac8.chr3 I 4 I 1 s macFas5.chr3 127687268 258 - 192294377 ----acaga----attagttccagcccccc-atctctgcatataccaaaatccatgctgactcacgtttcgccgtcacccctctggaacccacgtataGGaaaattccaaatatgagttgggcatagtggcaagcacctatagtctcagccacgtgggaggctgagacgggaggattgcttgagcctggg--aggttgaggctgcagtcaactgtgatagcactactacactccagac-tggacaacagaacgagactctgtctcagaaa i macFas5.chr3 I 4 I 1 s macNem1.NW_012013022v1 8933818 257 - 10413719 ----agagg----attagttccagctcccc-atctctgcatataccaaaatccatgcatactcacgtttcactttcagccctctggaacccacatataggaaaagtcC-AATattagttgggcatagtagcaagcatctatagtctcagccacttgggaggctgaggtgcgaggatcgcttgagcctgcg--aggttgaggttacggtcagctgtgatggcaccactacactccagcc-tggacaatggagcaagaccctgtctcagaaa i macNem1.NW_012013022v1 I 4 I 31 s cerAty1.NW_012005081v1 32002 259 - 113584 ----acaga----attagttccagccccccaatccctgcatataccaaaatccatgcttactcacatttcgccgtcacccctctggaacccacgtataGGaaaattccaaatattagttgggcatagtggcaagcacctatagtctcagccacatgggaggccgagatgggaggatcgcttgagcctggg--aggttgaggctgcagtcaactgtgacagcactaccacactccagcc-tggacaacagagcaagacactgtctcagaaa i cerAty1.NW_012005081v1 I 2109 C 0 s chlSab2.chr21 124144079 258 - 127223203 ----acaga----attagttccagccccac-atctctgcatataccaaaatccatgcttactcacgtttcgccgtcacccctctggaacccacgtataGGaaaattccaaatattagttgggcatagtggcaagcacctatagtctcagccacgtgggaggctgagacggggagactgcttgagcctggg--aggttgaggctgcagtcaactgtgatagcactactacactccagac-tggacaacagaacgagactctgtctcagaaa i chlSab2.chr21 I 4 I 1 s manLeu1.NW_012100344v1 35641 258 - 148006 ----acaga----attagttccagtccccc-atctctgcatataccaaaatccatgctgactcacgtttcaccgtcacccctctggaacccacgtataGGaaaattccaaatattagtttggcatagtggcaagcacctatagtctcagccacgtgggaggctgagatgggaggattgcttgagcctggc--aggttgaggctgcagtcagctgtgatagcactactacactccagac-tggacaacagaacgagactctgtctcagaaa i manLeu1.NW_012100344v1 I 4 I 1 s colAng1.NW_012116633v1 744139 258 + 1536524 ----acaga----attagttccagcccccc-atctctgcatataccaaaatccatgcatactcacgtttcacattcagccctctggaacccacatatCGGaaaagtccaaatattagttgggcatagtagcaagcatctatagtctcagccatttgggaggctgaggtgggaggatcacttgagcctgcg--aggttgaggttacggtcagctgtgatggcgccactacactccagcc-tggacaacggagcaagaccctgtctcagaaa i colAng1.NW_012116633v1 I 4 I 6 s calJac3.chr2 1424200 260 + 204313951 aaagacagg----attacttccagctcccc-atctctgcacataccaaacttcatgcatactcacattt--cagtcagccctctggaacccacgtataggagaagtcgAAATACTGGTTgggcataatggcaaacacctatagtctcagccatttgggaagctgaggtgggaggatcgcttgaacctggg--aggtcatggctgcattcagctgtgatagcaccactgcactgtggca-tggacaatagagcaagaccctgtctcagaag i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 168395 261 + 13147851 aaagagagg----attacttccagctcccc-atctctgcatataccaaaattcatgcatactcacatttcacagtcagccttctggaactcacatataGGaaaagtcgaaatattggtt-ggtataatggcaaacacctacagtctcagccatttgggaagctgagatgggaggatcacttgaacctagg--aggtcacggctgcattcagctgtgatagcacgactgcactctagca-tggacaatagagcaagaccctgtctcagggg i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 284610 261 + 373793 aaagagagg----attacttccagatcctc-atctctgcatataccaaaattcatgcatactcacatttcacagtcaggcctctggaacccacgggctggaaaagtcgAAATATTGATg-ggcataatggcaaacacctacagtctcagccatttgggaagctgaagtgggaggatcacttgaacctggg--aggtcatggctgcattcagctgtgatagcaccactgcattctagca-tggacaatacagcaagactctgtctcagaaa i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6189677 264 - 15679484 aaagagagg----attacttccagctcccc-atctctgcatataccaaaattcatgcatactcacgtttcacagtcggccctctggaactcacgtataGGaaaagtcgaaatattggttgggcataatggcaaacacctacagtctcagccatttgggaagctgaggtgggaggattgcttgaatctggggtaggttatggctgcattcagctgtgatagcaccactatagtctagca-tggacaacagaacaagaccctgtctcagaaa i aotNan1.NW_018487315v1 C 0 C 0 a score=2745.000000 s hg38.chr3_KI270784v1_alt 19500 23 + 184404 aaaataaa---taaataaataaaGCA--- s panTro5.chr1 222300952 17 + 228573443 aaa---------aacaaaataaaaCA--- i panTro5.chr1 C 0 C 0 s panPan2.chr7 56713137 26 + 162613886 aaaacaaaacgaaaaaacaaaaaaTG--- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4217276 20 + 4392246 aaa--aaa----aacaaaataaaaCA--- i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46788157 18 - 99891981 aaa--------aaacaaaataaaaCA--- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55093399 20 + 185818997 ------aaacaaaacaaaacaaaaCA--- i rheMac8.chr3 I 1 C 0 s macFas5.chr3 127687527 20 - 192294377 ------aaacaaaataaaacaaaaCA--- i macFas5.chr3 I 1 C 0 s cerAty1.NW_012005081v1 32261 16 - 113584 ---------caaaacaaaac-aaaCA--- i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124144338 20 - 127223203 ------aaacaaaataaaacaaaaCA--- i chlSab2.chr21 I 1 C 0 s manLeu1.NW_012100344v1 35900 20 - 148006 ------aaaataaataaaacaaaaCA--- i manLeu1.NW_012100344v1 I 1 C 0 s colAng1.NW_012116633v1 744403 16 + 1536524 ----------aaaacaaaacaaaaaa--- i colAng1.NW_012116633v1 I 6 I 9 s calJac3.chr2 1424460 21 + 204313951 -----aaaaCATAATAA---TAACCAACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 168656 23 + 13147851 -----aaaaaaaaaaaa-agaaaacaaTA i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 284871 18 + 373793 -----aaaaaaaag------aaaaCAACA i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6189941 24 - 15679484 -----aaaaaaaaaaaaaagaaaacaaCA i aotNan1.NW_018487315v1 C 0 C 0 e macNem1.NW_012013022v1 8934075 31 - 10413719 I a score=1564991.000000 s hg38.chr3_KI270784v1_alt 19523 166 + 184404 GGTTAGAAACTGTGATGAGGTCTGCTGGGCAAAATTCCATATAAGC-AAAGTATAAATTAATAAAGCAAATCGTGATAAATTAGTACGATTGACTTTCTGGAGTTTCTGACAATAAAAGTAAGGAAAATGCAGAACACAAAGACAGAGAGTAAAAAGAGAAATTAGG s panTro5.chr1 222300969 166 + 228573443 GGTTAGAAACTGTAATGAGGTCTGCTGGGCAAAATTCCACATAAGC-AAAGTATAAATTAATAAAGCAAATCGTGATAAATTAGTACGATTGACTTTCTGGAGTTTCTGACAATAAAAGTAAGGAAAATGCAGAACACAAAGACAGAGAGTAAAAAGAGAAATTAGG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56713163 166 + 162613886 GGTTAGAAATTGTAGTACGGTCTGTTGGGCAAAATTCCATATAAGC-AAAGTATAAATTAATGAAGCAAATGGTGATAAATTAGTATGATTGACTTTCTGGAGTTTCTGACAATAAAGGTAAGAAAAATGCAAAACACAGAGACAGAGGGTAAAAAAAGAAATTAGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4217296 166 + 4392246 GGTTAGAAATTGTAATGAGGTCTGTTGGGCAAAATTCCATATAAGC-AAAGTATAAATAAATAAAGCAAATCGTGATAAATTAGTACGACTGACTTTCTGGAGTTTCTGACAACAAAAGTAAGGAAAATGCAGAACACAAAGACAGAGAGTAAAAAGAGAAATTAGG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46788175 166 - 99891981 GGTTAGAAATTGTAATGAGGTCTGTTGGGCAAAATTCCATATAAGC-AAAGTATAAATTAATAAAGCAAATGGTGATCAATTAGTAAGACTGACTTTCTGGAGTTTCTGACAATAAAAGTAAGAAAAATGCAAAACACAAAGACAGAGGGTAAAAAGAGAAATTAGG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55093419 164 + 185818997 GGTTAGAAATTGTAATGAGGCCTGTTGGGCAAAATTCCATATAAGCAAAAGTATAAATTAATAAAGCAAATGGCGATAAATTAGTATGACTGACTTTCTCGAGTTTCTGACAATAAAGGTAAGAAAAATGCAAAACACAGAGACAGAGGGT---AAAAGAAATTAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127687547 163 - 192294377 GGTTAGAAATTGTAATGAGGCCTGTTGGGCAAAATTCCATATAAGC-AAAGTATAAATTAATAAAGCAAATGGCGATAAATTAGTATGACTGACTTTCTCGAGTTTCTGACAATAAAGGTAAGAAAAATGCAAAACACAGAGACAGAGGGT---AAAAGAAATTAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8934106 166 - 10413719 GGTTAGAAATTGTAGTGAGGTCTATTGGGCAAAATTCCATATAAGC-AAAGTATAAATTAATGAAGCAAATGGTGATAAATTAATATGATTGACTTTCTGGAGTTTCTGACAATAAAGGTAAGAAAAATGCAAAACACAGAGACAGAGGGTAAAAAAAGAAATTAGG i macNem1.NW_012013022v1 I 31 I 799 s cerAty1.NW_012005081v1 32277 160 - 113584 GGTTAGAAATTTTAATGAGGCCTGTTGGGCAAAATTCCATATAAGC-AAAGTATAAATTAATGAAGCAAATGGTGATAAATTAGTACGACTGACTTTCTGGAGTT--TGACAATAAAGGTAAGAAATATGCAAAAC----AGACAGAGGGTAAAAAAAGAAATTAGG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124144358 163 - 127223203 GGTTAGAAATTGTAATGAGGCCTGTTGGGCAAAATTCCATATAAGC-AAAGTATAAATTAATAAAGCAAATGGCGATAAATTAGTATGACTGACTTTCTGGAGTTTCTGACAATAAAGGTAAGAAAAATGCAAAACACAGAGACAGAGGGT---AAAAGAAATTAAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 35920 163 - 148006 GGTTAGAAATTTTAATGAGGCCTGTTGGGCAAAATTCCATATAAGC-AAAGTATAAATTAATAAAGCAAATGGCGATAAATTAGTATGATTGACTTTCTGGAGTTTCTGACAATAAAGGTAAGAAAAATGCAAAACACAGAGACAGAGGGT---AAAAGAAATTAGG i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 744428 164 + 1536524 GGTTAGAAATTGTAGTGAGGTCTGTTGGGCAAAATTCAATATAAGC-AAAGTATAAATTAATGAAGCAAATGGTGATAAATTAGTATGATTGACTTTCTGGAGTTTCTGACAATAAAGGTAAGAAAAATGCAAAAC--AGAGACAGAGGGTAAAAAAAGAAATTAGG i colAng1.NW_012116633v1 I 9 C 0 s calJac3.chr2 1424481 166 + 204313951 GGTTAGAAATTGCAATGAGGGCTGATGGGGAAAATTCCACAGAAGC-AACGTACACATTAATGAAGCAGACGGTGATAAATCAGTACAACTGACTTTCTGGAGTTTCTGACAATAAAGGTAAGAAAAATGCAAAACACAGAGACGGAGCATAAAAAAAGAAATTAAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 168679 166 + 13147851 GGTTAGAAATTGTAATGAGGCCTGTTGGGGAAAATTCCATATAAGC-AAAGTATAAATTAATGAAACAAATAGTGATAAATTAGTACAATTGACTTTCTGGAGTTTCTGACAATAAAGGTAAGAAAAATGCAAAACACAGAGACAGAGCATAAAAAAAGAAATTAGG i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 284889 166 + 373793 GGTTAGAAATTGTAATGAGGGCTGTTGGGGAAAATTCCATATAAGC-AAAGTATAAATTAATGAAGCAAATGGTGATAAATTAGTACAACTCACTTTCTGGAGTTTCTGGTAATAAAGGTAAGAAAAATGCAAAACACAGAGACAGAGCATAAAAAAAGAAATTAGG i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6189965 166 - 15679484 GGTTAGAAATTGTAATGAGGGCTGTTGGGGAAAATTCCATATAAGC-AAAGTTTAAATTAATGAAACAAATAGTGATAAATTAATACAATTAACTTTCTGGAGTTTCCGATAATAAAGGTAAGAAAAATGCAAAACACAGAGACAGAGCATAAAAAAAGAAATTAGG i aotNan1.NW_018487315v1 C 0 C 0 a score=852644.000000 s hg38.chr3_KI270784v1_alt 19689 114 + 184404 AAAGCATTCTACATGTTGAATAGGAAGACACTGGCCATGTTCGTGCAGCGGCAGTATGTCGTGACATGACATACCTTGGAGAGAAGTTAACAGATGAGGAAGTTGATAAAAATC s panTro5.chr1 222301135 114 + 228573443 AAAGCATTCTACATGTTTAATAGAAAGACACTGGCCATGTTCATGCAGCGGCAGTATGTCGTGACATGACATACCTTGGAGAGAAGTTAACAGATGAGGAAGTTGATAAAAATC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56713329 114 + 162613886 GAAGCATTCTACGAGTTTAATAAAATGACACTGGCCATGTTCGTGCAGCAGCAGTATGTCATGATATGACATACCTTGGAGAGAAGTTAACAGATGAGGAAGTTGATAAAAATG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4217462 114 + 4392246 AAAGCATTCTACATGTTTAATAGGAAGACACTGGCCGTGTTCGTGCAACGGCAGTATGTCGTGACATGACATACCTTGGAGAGAAGTTAACAGATGAGGAAGTTGATAAAAATC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46788341 114 - 99891981 AAAGCATACTACATGTTTAATAGAAAGACACTGGCCATGTTCGTGCAGCAGCAGTATGTCATAATATGACACACCTTGGAGAGAAGTTAACAGATGAGGAAGTTGATAAAAATG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55093583 114 + 185818997 AAAGCATTCAACATGTTTAAGAGGAAGACACTGGCCATGTTTGTGCAGCAGCAGTATGTCACGATATGACATACCTTGGAGAGAAGTTAACAGATGAGGAAGTTCATAAAAATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127687710 114 - 192294377 AAAGCATTCAACATGTTTAAGAGGAAGACACTGGCCATGTTTGTGCAGCAGCAGTATGTCACGATATGACATACCTTGGAGAGAAGTTAACAGATGAGGAAGTTCATAAAAATG i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 32437 114 - 113584 AAAGCATTCTACATGTTTAATAGGAAGACACTGGTCATGTTCATGCAGCAGCAGTATGTCATGATATGACGTACCTTGAAGAGAAGTTAACAGATGAGGAAGTTGATAAAAGTG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124144521 114 - 127223203 AAAGCATTCAACATGTTTAAGAGGAAGACACTGGCCATGTTTGTGCAGCAGCAGTATGTCACGATATGACATACCTTGGAGAGAAGTTAACAGATGAGGAAGTTCATAAAAATG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 36083 114 - 148006 AAAGCATTCAACATGTTTAAGAGGAAGACACTGGCCATGTTTGTGCAGCAGCAGTATGTCATGATATGACATACCTTGGAGAGAAGTTAACAGATGAGGAAGTTCATAAAAATG i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 744592 114 + 1536524 GAAGCATTCTACATGTTTAATAAAATGACACTGGCCATGTTCATGCAGCAGCAGTATGTCATGATATGACATACCTTGGAGAGAAATTAACAGATGAGGAAGTTGATAAAAATG i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1424647 108 + 204313951 GAGGCATT-TACGTGTACAATAGGGTGACCCTGGCTGTGTTTGT---GCAGCAGTGTGTCACGATGTGACCTA-CTTGAAGATGAGTTAAC-GACGAGTGAGTTGATAGAAATG i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 168845 112 + 13147851 GAAGCATTCTACATGTACTGTAGGATGACCCTGGCCATGTCTGTGTAGCAGCAGTGTGTCACGATGTGACATA-CTTGGAGAGAAGTTATC-GATGAGTAAGTTGATAAAAATG i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 285055 112 + 373793 GAAGCATTCTACATGTAGAGTAGGATGACCCTGGCCATGTTTGTGTAGCAGCAGTGTGTCACGATGTGACATA-CTTGGAGAGAAGTTAAC-CATGAGTAAGTTGATAAAAATG i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6190131 112 - 15679484 GAAGCATTCTACGTGTACAATAGGATGACCCCGGCCATGTTTGTGCAGCAGCAGTGTGTCACGATGTGACATA-CTTGGAGAGGGGTTAAC-GATGAGTAAGTTGATAAAAATG i aotNan1.NW_018487315v1 C 0 C 0 e macNem1.NW_012013022v1 8934272 799 - 10413719 I a score=100713.000000 s hg38.chr3_KI270784v1_alt 19803 10 + 184404 ATCAGAGAAG s panTro5.chr1 222301249 10 + 228573443 ATCAGAGAAG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56713443 10 + 162613886 ATCAGAGAAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4217576 10 + 4392246 ATCAGAGAAG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46788455 10 - 99891981 ATCAGAGAAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55093697 10 + 185818997 ATCAGAGAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127687824 10 - 192294377 ATCAGAGAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8935071 10 - 10413719 ATCAGAGAAG i macNem1.NW_012013022v1 I 799 C 0 s cerAty1.NW_012005081v1 32551 10 - 113584 ATCCAAGAAG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124144635 10 - 127223203 ATCAGAGAAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 36197 10 - 148006 ATTAGAGAAG i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 744706 10 + 1536524 ATCAGAGAAG i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1424755 10 + 204313951 ATCAGAGGAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 168957 10 + 13147851 ATCAGAGGAg i saiBol1.JH378167 C 0 I 310 s cebCap1.NW_016108107v1 285167 10 + 373793 ATCAGAGGAG i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6190243 10 - 15679484 ATCAGAGGAG i aotNan1.NW_018487315v1 C 0 C 0 a score=1328822.000000 s hg38.chr3_KI270784v1_alt 19813 192 + 184404 CAAAATACTGGTAGCGACACTCAAGTAAACCATGA--AATTTCCATAACTTATGTCAGCAAAGTGGGAATATTGTACAGTGTGTGTTGAAGTTCCTATACAACATTGTTTATCTGCCTTTTGTTTGTTTGT----AAGGAATGTATATACTAAAAGTTCTTCTTGCTGTCAAAAGAATATGCGTGAATAAGTCATTTT s panTro5.chr1 222301259 192 + 228573443 CAAAATACTGGTAGCGACACTCAAGTAAACCATGA--AATTTCCATAACTTATGTCAGCAAAGTGGGAATATTGTACGGTGTGTGTTGAAGTTCCTATACAACAttgtttatctgtcttttgtttgtttgt----AAGGAATGTATATACTAAAAGTTCTTCTTGCTGTCAAAAGAATATGTGTGAATAAGTCATTTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 56713453 185 + 162613886 CCACATACCAATAGCGACAGTCAAGTAAACCACGAAGAATTTACACAACTGATGTCAGCAACGTGGAAATATTGTATAGTGTGTGTTGAAGTTCCTGT---ACATTGTTTATTTGCCT----TTTGTTTGA----AAGAAATCTATCTACT--AAGTTATTCTTGCTATCAAAAGAATATGTGTGAATAAGTCATTTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4217586 192 + 4392246 CAAAATACTGGTAGCGACACTCAAGTAAACCACGA--AATTTCCATAACTTATGTCAGCAAAGTGGGAATATTGTACAGTGTGTGTTGAAGTTCCTATACAACATTGTTTATCTGCCGTTTGTTTGTTTGT----AAGGAATGTATATACTAAAAGTTCTTCTTGCTGTCAAAAGAATATGTGTGAATAAGTCATTTT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46788465 184 - 99891981 CAAAATACTGGTAGCGACACTC----AAACCACGA--AATTTCCATAACTTATGTCAGCAAAGTGGGAATATTGTACAGTGTGTGTTGAAGTTCCTATACAACATTGTTTATCTGCCT----TTTGTTTGT----AAGGAATGTATATACTAAAAGTTCTTCCTGCTGTCAAAAGAATATGTGTGAATAAGTCATTTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55093707 188 + 185818997 CAAAATACTGATAGCGATACTCAAGTAAACCACAA--AATTTCCATAACTCATGTCAGCAAAGTGGGAATATTGTACAGTGTGTGTTGACGTTCCTATACAACACTGTTTATTTGCCTTATGTTTGTTTGC----AAGGAATGTATATACTAAAAGTTCTTCTTGCTGTCAAAAGAATATGTG----TAAGTCATTTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127687834 188 - 192294377 CAAAATACTGATAGCAATACTCAAGTAAACCACAA--AAGTTCCATAACTCATGTCAGCAAAGTGGGAATATTGTACAGTGTGTGTTGACGTTCCTATACAACACTGTTTATTTGCCTTATGTTTGTTTGC----AAGGAATGTATATACTAAAAGTTCTTCTTGCTGTCAAAAGAATATGTG----TAAGTCATTTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8935081 198 - 10413719 CAAATTACTGATAGTGATAGTTAAGTAAACCATAAAGAATTTCCACAACTGATGTCAGCAAAGTGGAAATATTGTACAGTGTGTGTTGAAGTTCCTGTACAACATTGTTTATTTGCCTTTTGTTTGTAAGAAATGAAGAAATGTATCTACTAAAAGTTCTTCTTGCTGTCAAAAGAATATGTGTGAATAAGTCATTTG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 32561 194 - 113584 CAAAATACTGATAGTGATAGTCAAGTAAACCACAAAGAATTTCCATAATTGATGTCAGCAAAGTGGGAATATTGTACAGTGTGTGTTGAAGTTCCCATACAACATTGTTTATTTAGCTTTTGTTTGTTTGT----AAGGAACATATATACTAAAAGTTCTTTTTGTTGTCAAAAGAATATGTGTGAATAAGCCACTTG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124144645 184 - 127223203 CAAAATACTGATAGCAATACTCCAGTAAACCACAA--AATTTCCATAACTCATGTCAGCAAAGTGGGAATATTGTACAGTGTGTGTTGACGTTCCTATACAACACTGTTAATTTGCCTTA----TGTTTGC----AAGGAATGTATATACTAAAAGTTCTTCTTGCTGTCAAAAGAATATGTG----TAAGTCATTTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 36207 188 - 148006 TAAAATACTGATAGCAATACTCAAGTAAACCATGA--AATTTCTATAACTCATGTCAGCAAAGTGGGAATATTGTACGGTGTGTGTTGACATTCCTATACAACATTGTTTATTTGCCTTATGTTTGTTTGC----AAGGAATGTATATACTAAAAGTTCTTATTGCTGTCAAAAGAATATGTG----TAAGTCATCTG i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 744716 190 + 1536524 CAAATTACTGATAGTGATAGTTAAGTAAACCATGAAGAATTTCCACAACTGATGCTAGCAAAGTGGAAATATTGTACAGTGTGTGTTGACGTTCCTATACAACACTG----TTTGCCTTATGTTTGTTTGT----AAGGAATGTATATACTAAAAGTTCTTTTTGTTGTCAAAAGAATATGTGTGAATAAGTCATTTG i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1424765 178 + 204313951 CAAAATACCGAGAGCGATAGTTAAG---------AAGAATCTCCCTGAGCGATGTCAGAAAAGTGGGGATAT--TGCAGTGTGTATTGGAGCTCCTGTACAACACTGTTTATCTGCCTTTTGTCTGT---------AAAAACATATCTACTAAAAGTTCTTCTTGCTGTCAAAAGAGTATGTGGGAATAAATCATTAG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108107v1 285177 192 + 373793 CAAAATACTGATAGTGATAGTTAAGTAAACCACCAAGAATCTCCCTAACTGATGTCAGAAAAGTGAGAATAT--TACAGTGTGTATTGAAGTTCCTGTACAACATTGTTTATTTGCCTTTTGTTTGTTTAG----AAAAAACATAACTACTAAAAGTTCTTCTTGCCGTCAAAAGAATATGTGGGAATAAATCATTAG i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6190253 188 - 15679484 GAAAATACTGATAGCGATAGTTAAGTAAACCACGAAGAATCTCCCT----GATGTTAGAAAAGTGGGAATAC--TACAGTGTGTATTGAAGTTCCTGTACAACACTGTTTATTTGCCTTTTGTTTGTTTGT----AAAAAGCATATCTACTAAAAGGTCTTCTTGCTGTCAAAAGAATATGTGGGAATAAATCATTAG i aotNan1.NW_018487315v1 C 0 C 0 e saiBol1.JH378167 168967 310 + 13147851 I a score=2312201.000000 s hg38.chr3_KI270784v1_alt 20005 251 + 184404 AACTTATTCTTCTGTTTTT---CTTTTATCTTCCTGCCATCATCCCACAGCCTTACTTTAGAAA-TTT-----CTTTTTTAGAAAATTGAACAAGTGCTCCTTGTGGTGGCACATACCTCGAGGAtgggaggcaggggtggaagggtcacttgaggccattagt-ttgacaccagcctggccaaaaaagtgagaccccgtgtctacaaa-acaatttaaaaattagccaagtatcgtcatgtatacctacagtcccagctac s panTro5.chr1 222301451 251 + 228573443 AACTTATTCTTCTGTTTTT---CTTTTATCTTCCTGCCATCATCCCACAGCGTTACTTTAGAAA-TTT-----TTTTTTTAGAAAATTGAACAAGTGCTCCTTGTGGTGGCACATGCCTCGAGGAtgggaggcaggggtggaagggtcacttgaggccattagt-ttgacaccagcctggccaacaaagtgagaccccatgtctacaaa-acaatttaaaaattagccaagtatcgtcatgtatacctacagtcctagctac i panTro5.chr1 C 0 I 3214 s panPan2.chr7 56713638 258 + 162613886 AACTTATTCTTCTGTTTTTCTACTTTTATCTTCCTGCCATCATCTCATAGCCTTACTTTAGAAT-TTTTTT-ATTTTTTTAGAAAATTGAACAAGTGCTCCTTgtggtggctcatacctctaggatggaaggcaggggtagaagggtcacttgaggccaggagt-ttgacaccagcctggccaacaaagtgagaccccatgtctacaaa-ataatttaaaaattagccagatgtcatcatgtatacctacagtcccagctac i panPan2.chr7 C 0 T 3402 s gorGor5.CYUI01015383v1 4217778 251 + 4392246 AACTTATTCTTCTGTTTTT---CTTTTATCTTCCTGCCATCATCCCACAGCCTTACTTTAGAAA-TTT-----TTTCTTTAGAAAATTGAACAAGTGCTCCTTGTGGTGGCACATACCTCTAGGAtgggaggcaggggtggaagggtcacttgaggccattagt-ttgacaccagcctggccaacaaagtgagaccccatgtctacaaa-acaatttaaaaattagccaagtatcgtcatgtatacctacagtcctagctac i gorGor5.CYUI01015383v1 C 0 I 3214 s nomLeu3.chr17 46788649 256 - 99891981 GACTTAATCTTCTGTTTTT---CTTTTATCTTCCTGCCATCATCCCACAGCCTTACTTTAGAAA-TTTTTT-ATTTTTTTAGAAAATTGAACAAGTGTTCCTTGTGGTGGCACATACCTCTAGGAtgggaggcagggatggaagggtcacttgaggccatgagcgttgacaccagcctggccaacaaagtgagaccccatgtctacaaa-acagtttaaaaattagccaagtatcgtcatgtatacctacagtcccagctac i nomLeu3.chr17 C 0 I 4160 s rheMac8.chr3 55093895 258 + 185818997 AACGTATTCTTCTGTTTTTCTATTTTTATCTTCCTGCCATCATCCTACAGCCTTACTTTAGAAA-TGTTTT-ATTTGTTTAGAAAATTGAACAAGTGCTCGTTGTGGCAGCTCCTACCTCTAGGAtgggaggcaggggtgaaagggttacttaaggccaggagt-ttgacaccagccaggccaacaaagtgagaccccgtgtccacaaa-acaatttaaaaattagccaagtgtcgtcatgtatacctatagtcccagctac i rheMac8.chr3 C 0 I 5611 s macFas5.chr3 127688022 258 - 192294377 AACGTATTCTTCTGTTTTTCTATTTTTATCTTCCTGCCATCATCCTACAGCTTTACTTTAGAAA-TGTTTT-ATTTGTTTAGAAAATTGAACAAGTGCTCGTTGTGGCAGCTCCTACCTCTAGGAtgggaggcaggggtgaaagggttacttaaggccaggagt-ttgacaccagccaggccaacaaagtgagaccccatgtccacaaa-acaatttaaaaattagccaagtgtcgtcatgtatacctatagtcccagctac i macFas5.chr3 C 0 I 5148 s macNem1.NW_012013022v1 8935279 258 - 10413719 AACTTATTCTTCTGTTTTTCTACTTTGATCTTTCTGCCATCATCCCACAGCCTTACTATAGAAA-TTTCTT-ATTTTTTTAGAAATTTGAACAAGTGCTTGTTgtggtggctcatacctctaggatgggaggcaggggtggaagggtcactcgaggccaggagt-ttgacaccagcctggccaacaaagtgagaccccatgtctacaaa-acaatttaaaaattagccaggtatcatcatgtatacctacagtcccagctac i macNem1.NW_012013022v1 C 0 T 4082 s cerAty1.NW_012005081v1 32755 259 - 113584 AACTTATTCTTCTGTTTTTCTACTTTTATCTTCCTGCCATCATCCCACAGCCTTACTTTAGAAATTTTTTT-TTTTTTTTAGAAAATTGAACAAGTGCTCGTTgtggtggctcatacctctaggatgggtggcaggggtagaagggtcacttgaagtcaggagt-ttgacagcagccaggccaacaaagtgaggctccatgtctacaaa-acaatttaaaaattagccaagtgtcgtcatgtatacctatagtctcagctac i cerAty1.NW_012005081v1 C 0 I 2778 s chlSab2.chr21 124144829 254 - 127223203 AACATATTCTTCTGTTTTTCTATTTTTATCTTCCTGCCATCATCCTACAGCCTTACTTTAGAAA-TGTTTT-ATTTGTTTAGAAAATTGAACAAGTGCTCATTGTGGCAGCTCATACTTCTAGGAtgggaggcaggggtgaaagggttacttaaggccaggagt-ttgaca----ccaggccaacaaagtgagaccccatgtccacaaa-acaatttaaaaattagccaagtgtcgtcatgtatacctatagtcccagctac i chlSab2.chr21 C 0 T 3397 s manLeu1.NW_012100344v1 36395 258 - 148006 AATTTATTCTTCTGTTTTTCTATTTTTATCTTCCTGCCATCATCCTACAGCCTTACTTTAGAAA-TGTTTT-ATTTGTTTAGAAAATTGAACAAGTGCTCGTTGTGGCAGCTCATACCTCTAGGAtgggaggcaggggtgaaagggttacttgaggccaggagt-ttgacaccagccaggccaacaaagtgagaccccatgtccacaaa-ataatttaaaaattagccaagtgtcgtcatgtatacctatagtcccagctac i manLeu1.NW_012100344v1 C 0 T 3402 s colAng1.NW_012116633v1 744906 245 + 1536524 AACTTATTCTTCTGTTTTTCTACTTTGATCTTTCTGCCATCATCCCACAGCCTTACTTTAGAAA-TTTTTA-ATTTTTTTAGAAATTTGAACAAGTGCTTGTTGTGGTGGCTCATACCTCTAGGATgg-------------aagggtcactcgaggccaggagt-ttgacaccagcctggccaacaaagtgagaccccatgtctacaaa-acaatttaaaaattagccaggtatcatcgtgtatacctacagtcccagctac i colAng1.NW_012116633v1 C 0 T 3492 s calJac3.chr2 1424943 257 + 204313951 AATTTATTCTTTTGTTTTT-CACCTTTATCTTCCTGCCATCATCCCACAGCCTCACTTTAGAAA-TGTTTGTTTTTTTTTAGAAAATTGAACAAGTGTTCATTGTGGTGGATCATACCTCTAGGAtgggaggtgggggtagaagggtcacttgaggccaggagt-ttgacaccagcccgaccaaaaaagtgagaacccatgtctataaa--aattttttaaattaaccaggtgtcatcatttatacctacagtcccagctac i calJac3.chr2 C 0 I 23395 s saiBol1.JH378167 169277 257 + 13147851 AATTTATTCTTCTGTTTTT-TACTTTTATCTTCCTGCCGTCATCCAACAGCCTTACTTTAGAAA-TGTTTA-TTTTTTTTAGAAAATTGAACAAGTGTTCGTTGTGGTGGATCATACCTCTAGGAtgggaggtgggggtagaagggtcacttgaggccaggagt-ttgacaccagcctgaccaacaaagtgagaccccatgtctataaa-caaatttaaaaattaaccaggtattatcatgtatacctacagtcccagctac i saiBol1.JH378167 I 310 I 3045 s cebCap1.NW_016108107v1 285369 258 + 373793 AATTTATTTTTCTGTTTTT-TACTTTTATCTTCCTGCCATCATCCCACAGCCTTACTTTAGAAA-TGTTTA-TTTTTTTTAGAAAATTGAACAAGTGTTCATTGTGGTGGATCATATTTCTAGGAtgggagcccagcatggaagggtcacttgaggccagcagt-ttgacaccagcctaaccaacaaagtgagaccccatgtctataaaaaaaaattaaaaattaaccgggtgtcatcatatatacctacagtcccagctac i cebCap1.NW_016108107v1 C 0 I 12074 s aotNan1.NW_018487315v1 6190441 256 - 15679484 AATTTATTCTTCCTTTTTT-TACTTTTATCTTCCTGCCATCATCCCGCAGCCTTACTTTAGAAA-TGTTTA--TTCTTTTAGAAAATTGAACAAGTGCTCACTGTGGTGGATCATAACTCTAGGAtgggaggccggggtagaagggtcacttgaggccaggagt-ttgacaccagcctgaccaacaaagtaagaccccatgtctataaa-aaaatttaaaaattaaccaggtgtcatcatgtatacctacagtcccagctac i aotNan1.NW_018487315v1 C 0 I 3737 a score=0.000000 s hg38.chr3_KI270784v1_alt 20256 10 + 184404 CTGAACTTAC e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e colAng1.NW_012116633v1 745151 3492 + 1536524 T e rheMac8.chr3 55094153 5611 + 185818997 I e manLeu1.NW_012100344v1 36653 3402 - 148006 T e chlSab2.chr21 124145083 3397 - 127223203 T e macNem1.NW_012013022v1 8935537 4082 - 10413719 T e macFas5.chr3 127688280 5148 - 192294377 I e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56713896 3402 + 162613886 T e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=10424.000000 s hg38.chr3_KI270784v1_alt 20266 12 + 184404 TGAGAAAGTTCA s macNem1.NW_012013022v1 8931455 12 - 10413719 TGAGAAAGTTCT i macNem1.NW_012013022v1 T 4082 C 0 s chlSab2.chr21 124141686 12 - 127223203 TGAGAAAGTTCT i chlSab2.chr21 T 3397 C 0 s manLeu1.NW_012100344v1 33251 12 - 148006 TGAGAAAGTTCT i manLeu1.NW_012100344v1 T 3402 C 0 s colAng1.NW_012116633v1 741659 12 + 1536524 TGAGAAAGTTCT i colAng1.NW_012116633v1 T 3492 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e rheMac8.chr3 55094153 5611 + 185818997 I e macFas5.chr3 127688280 5148 - 192294377 I e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56713896 3402 + 162613886 T e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=69477.000000 s hg38.chr3_KI270784v1_alt 20278 54 + 184404 GGGCCTGGAGAGAAGGCTGGGAGGCAGGAGCTGGGTCTAAAGAGGCCATTGTAA s panPan2.chr7 56710494 54 + 162613886 GGGCCTGGAGAGAAGGCTGGGAGGCAGGAGTTGGGCCTAAAGAGGCCATTGTAA i panPan2.chr7 T 3402 I 192 s macNem1.NW_012013022v1 8931467 54 - 10413719 GGGCCTGGAGAGAAGGCTGGGAGGCAGGAGCTGGGCCTCAAGAGGCCGTTGTAA i macNem1.NW_012013022v1 C 0 C 0 s chlSab2.chr21 124141698 54 - 127223203 GGGCCTGGAGAGAAGACTGGGAGGCAGGAGCTGGCTCTAAAGAGGCCGTGGTAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 33263 54 - 148006 GGGCCTGGAGAGAAGACTGGGAGGCAGGAGCTGGGTCTACAGAGGCCGTTGTAA i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 741671 54 + 1536524 GGGCCTGGAGAGAAGGCTGGGAGGCAGGAGCTGGGCCTGAAGAGGCCATTGTAA i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e rheMac8.chr3 55094153 5611 + 185818997 I e macFas5.chr3 127688280 5148 - 192294377 I e nomLeu3.chr17 46788905 4160 - 99891981 I e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=15809.000000 s hg38.chr3_KI270784v1_alt 20332 18 + 184404 CGATGGAGCTGTGCCTGT s macNem1.NW_012013022v1 8931521 18 - 10413719 TGATGGAGCTGGGCCTGT i macNem1.NW_012013022v1 C 0 C 0 s chlSab2.chr21 124141752 18 - 127223203 CGATGGAGCTGGGCCTGT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 33317 18 - 148006 CGATGGAGCTGGGCCTGT i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 741725 18 + 1536524 TGATGGAGCTGGGCCTGT i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e rheMac8.chr3 55094153 5611 + 185818997 I e macFas5.chr3 127688280 5148 - 192294377 I e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56710548 192 + 162613886 I e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=8517.000000 s hg38.chr3_KI270784v1_alt 20350 16 + 184404 GGAGGCTGTTGTGAGG s macNem1.NW_012013022v1 8931539 16 - 10413719 GGAGGCTGTCATGAGG i macNem1.NW_012013022v1 C 0 C 0 s chlSab2.chr21 124141770 16 - 127223203 GGAGGCTGTTGTGAGG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 33335 16 - 148006 GGAGGCTGTTGTGAGG i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e colAng1.NW_012116633v1 741743 0 + 1536524 C e rheMac8.chr3 55094153 5611 + 185818997 I e macFas5.chr3 127688280 5148 - 192294377 I e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56710548 192 + 162613886 I e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=3677.000000 s hg38.chr3_KI270784v1_alt 20366 16 + 184404 CAGTAGCCTCATCTGC s chlSab2.chr21 124141786 16 - 127223203 CAGTAGCCTTATCTGT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 33351 16 - 148006 CAGTAGCCTCATCGGC i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e colAng1.NW_012116633v1 741743 0 + 1536524 C e rheMac8.chr3 55094153 5611 + 185818997 I e macNem1.NW_012013022v1 8931555 0 - 10413719 C e macFas5.chr3 127688280 5148 - 192294377 I e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56710548 192 + 162613886 I e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=7390.000000 s hg38.chr3_KI270784v1_alt 20382 16 + 184404 GGAGGCTGCCGTGACG s chlSab2.chr21 124141802 16 - 127223203 GGAGACTGCTGTGAGG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 33367 16 - 148006 GGAGACTGCCGTGAGG i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 741743 16 + 1536524 GGAGGCTGCCATGAGG i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e rheMac8.chr3 55094153 5611 + 185818997 I e macNem1.NW_012013022v1 8931555 0 - 10413719 C e macFas5.chr3 127688280 5148 - 192294377 I e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56710548 192 + 162613886 I e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=71877.000000 s hg38.chr3_KI270784v1_alt 20398 88 + 184404 TAGGGTATGGGCCTAAATAGGCCATTGAGAGTCATGAGCTTGGTCTGTAGAGGCTGACTGGAGAAAGTTCTGG-GCCTGGAGAGGCTGC s macNem1.NW_012013022v1 8931555 88 - 10413719 TAGGGTATGGGCCTAAATAGGCCATTGTGAGCCATGAGCTTGACCCGTAGAGGCCGACTGGAGAAAGTTCTGG-ACCTGGAGAGGCTGC i macNem1.NW_012013022v1 C 0 C 0 s chlSab2.chr21 124141818 88 - 127223203 TAGGGCACGGGCCTAAATAGACCATTGTGAGTCATGAGCTTGGTCTGTAGAGGCCGACTGGAGAAAGTTCGGG-GCCTGGAGAGGCTGC i chlSab2.chr21 C 0 I 6706 s manLeu1.NW_012100344v1 33383 89 - 148006 TAGGGTATGGGCCTAAATAGACCATTGTGAGTCATGAGCTTGGTCTGTAGAGGCCGACTGGAGAAAGTTCGGGTTCCTGGAGAGGTTGC i manLeu1.NW_012100344v1 C 0 I 9 s colAng1.NW_012116633v1 741759 88 + 1536524 TAGGGTATGGGCCTAAATAGGCCATTGTGAGCCATGAGCTTGACCCGTAGAGGCCAGTTGGAGAAAGTTCTGG-ACCTGGAGAGGCTGC i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e rheMac8.chr3 55094153 5611 + 185818997 I e macFas5.chr3 127688280 5148 - 192294377 I e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56710548 192 + 162613886 I e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=15323.000000 s hg38.chr3_KI270784v1_alt 20486 34 + 184404 CGGGAGGTAGGAGCTGGGCCAAAAgatgtaagca s macNem1.NW_012013022v1 8931643 34 - 10413719 CAGGAGGCAGGAGCTGAGCCAAAAgattcaagca i macNem1.NW_012013022v1 C 0 C 0 s manLeu1.NW_012100344v1 33481 34 - 148006 CGAGAGGCAAGACCTGGGCCAAAAgattcaagta i manLeu1.NW_012100344v1 I 9 C 0 s colAng1.NW_012116633v1 741847 34 + 1536524 CAGGAGGCAGGAGCTGAGCCAAAAgattcaagca i colAng1.NW_012116633v1 C 0 I 150 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e rheMac8.chr3 55094153 5611 + 185818997 I e chlSab2.chr21 124141906 6706 - 127223203 I e macFas5.chr3 127688280 5148 - 192294377 I e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56710548 192 + 162613886 I e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=340.000000 s hg38.chr3_KI270784v1_alt 20520 3 + 184404 cat s macNem1.NW_012013022v1 8931677 3 - 10413719 cat i macNem1.NW_012013022v1 C 0 C 0 s manLeu1.NW_012100344v1 33515 3 - 148006 tgt i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e colAng1.NW_012116633v1 741881 150 + 1536524 I e rheMac8.chr3 55094153 5611 + 185818997 I e chlSab2.chr21 124141906 6706 - 127223203 I e macFas5.chr3 127688280 5148 - 192294377 I e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56710548 192 + 162613886 I e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=546.000000 s hg38.chr3_KI270784v1_alt 20523 1 + 184404 t s macFas5.chr3 127693428 1 - 192294377 t i macFas5.chr3 I 5148 C 0 s macNem1.NW_012013022v1 8931680 1 - 10413719 t i macNem1.NW_012013022v1 C 0 C 0 s manLeu1.NW_012100344v1 33518 1 - 148006 t i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e colAng1.NW_012116633v1 741881 150 + 1536524 I e rheMac8.chr3 55094153 5611 + 185818997 I e chlSab2.chr21 124141906 6706 - 127223203 I e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56710548 192 + 162613886 I e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=91.000000 s hg38.chr3_KI270784v1_alt 20524 1 + 184404 t s macFas5.chr3 127693429 1 - 192294377 t i macFas5.chr3 C 0 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e colAng1.NW_012116633v1 741881 150 + 1536524 I e rheMac8.chr3 55094153 5611 + 185818997 I e manLeu1.NW_012100344v1 33519 0 - 148006 C e chlSab2.chr21 124141906 6706 - 127223203 I e macNem1.NW_012013022v1 8931681 0 - 10413719 C e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56710548 192 + 162613886 I e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=19855.000000 s hg38.chr3_KI270784v1_alt 20525 34 + 184404 gcatttattaggcactttatttc---cattattacac s panPan2.chr7 56710740 34 + 162613886 acatttattaggcactttatttc---cattattacat i panPan2.chr7 I 192 C 0 s macFas5.chr3 127693430 37 - 192294377 acatatactgtgcactttatttctattattactacat i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8931681 33 - 10413719 acatttattaggcacttttttcc----attattacat i macNem1.NW_012013022v1 C 0 C 0 s manLeu1.NW_012100344v1 33519 34 - 148006 acatttattaggtactttatttc---cattataaaat i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e colAng1.NW_012116633v1 741881 150 + 1536524 I e rheMac8.chr3 55094153 5611 + 185818997 I e chlSab2.chr21 124141906 6706 - 127223203 I e nomLeu3.chr17 46788905 4160 - 99891981 I e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=416459.000000 s hg38.chr3_KI270784v1_alt 20559 437 + 184404 tgtaatatataataaaataattatagaactcaccataatgtagaatcagtgggcgtgttaagcttgttttcctgcaactggatgttcccacctgagcgtgatgggagaaagtgacagatcaataggtattagactctcataaggac---agcgcaacccagatccctcacatgcacagttcacaacagggtgcgttctcctatgagcatctaatgctgctgctcatctgaga--aggtggagctcaggcgggaatgtgagcaaaggggagtggctgtaaatacagacgaagctt-ccctcactccctcactcgac-accgctcacctcctgctgtgtggctccttgcggctccatggctcaggggttggggacccctgCTCAAGTGCATCCAAAACGACCCTTCCCACACCAGTCTTCA------------------CAGTGGTCAAGGGCAGCAACCACTT s panPan2.chr7 56710774 429 + 162613886 tgtagtatataatgaaataattatagaactcaccataatgtagaatcagtggacatgttaagcttattttcctgcaacaagatggtcccatctgaat-tgatggaagaaagtgacagataatcaggtattagattctcatagggac---agcacaacccagatctctcgcatgcacggtttgca-taggatgcatgctcctatgagaatctaatgctgctgctgatctgagagaaggcggagctcaggcgggaatatgagcaatggggagtggctgtaaatacagatgcagctt-ccctcactc--------aac-accactcacctcctgctgtgtggctccttaaatctccatggctcaggggttggggacccctgCTGAAGTGCATCCAAAAGGACCATTCCCACACCAGTCTTCA------------------TAGCGGTCAAGTGCAGCAACCACTT i panPan2.chr7 C 0 I 10408 s macFas5.chr3 127693467 429 - 192294377 tgtaagatataatgaaataattctacaacttactataatgtagactcagtgggatctctgagcttgttttcctgcaacgacactgt-ccatct-agggtgatgggagatagtgatagaacatcaggcattggattctcataaggag---tgcacaacctagatccctcgcatgcacgcttcacaacagggttcgtgcttctatgagaatcgaatgctgctgctcatctgacaggacatggagctcaggtggtcatacaagc-gataggaggggctagaaatacagatgaagtttcccctcactc--------gcctgctgctcacctccggttctatggcccTTT------------------GGTTGGAGACCGCTGCTCAAGTGCATTCGAAAGGATCCATCCCATGCCATTCTTCAGAGTCATCTTTACTGTGGCAGTGGTCAACTGTAGC-ACCCCTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8931714 430 - 10413719 tgtaatatataatgaaataattatagaactcaccataatgtagaatcagtgggcatgttaggcttgttttcctgcaacaagacggtcccatctgagcttgacgggagaaagtgacagatcatcaggtattagattctcacagggac---agtgcaacccagatctctcgcatgtatggttcac-ataggatgcatgctcctatgagaatctaatgctgctgctgacctgagagaaggtggagctcaggcgggaatgtgagcaaaggggagtggctgtaaatacagatgcagctt-cccttactc--------gac-accactcacctcctgctgtgtggctccttatagctccatggctcaggggttggggacccctgCTGATGTACATCCAAAAGGACCGTTCCCACAACAGTCTTCA------------------TAGCGGTCAAGTGCAGTAACCACTT i macNem1.NW_012013022v1 C 0 C 0 s manLeu1.NW_012100344v1 33553 424 - 148006 tgtaatagatga-aaagtaattatagaactcaccataatgtagaatcagtgggcatgttaagcttgttttcctgcgactacatggtcccatctgagcat------agaaggtgacag---attaggcattagattctcatagggacaaaagcacaacctagatccctcacatgcacggttcacaacagggtgtgtgctcctatgagaatctaatgctgctgctgacctgagggaaggtggagctcaggcaggaatgtgagcaaaggggagtggctgtaaatacagatgaagctt-ccctcactc--------gat-accactcacctcctgttgtgtggctccttacagctccatggctcagggattggggacccGGGCTTAAGTGCATCCAAAAGCACCCTTCCCACACCAGTCTTCA------------------TAGCGGTCAAGTGCAGCAACCACTT i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 742031 430 + 1536524 tgtactatataatgaaataattacagaactcaccataatgtagaatcagtgggcatgttaaggttgttttcctgcaacaaggtggtcccatctgagcttgacgggagaaagtgacagatcatcaggtattagattctcacagggac---agtgcaacccagatctcttgcatgcacagttcac-ataggatgcatgctcctatgagaatctaatgctgctgctgatctgagagaaggcggaggtcaggtgggaatatgagcaatggggagtggctgtaaatacagatgcagctt-cccttactg--------gac-accactcacctcctgctgtgtggctccttatagctccatggctcaggtgttggggacccctgCTGATGTACATCCAAAAGGACCGTTCCCACAACAGTCTTCA------------------TAGCGGTCAAGTGCAGTAACCACTT i colAng1.NW_012116633v1 I 150 I 10736 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e rheMac8.chr3 55094153 5611 + 185818997 I e chlSab2.chr21 124141906 6706 - 127223203 I e nomLeu3.chr17 46788905 4160 - 99891981 I e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=299998.000000 s hg38.chr3_KI270784v1_alt 20996 183 + 184404 AGCTCCCAAGGCATGTGCCTCAGCTGGCATTTCGTCACAATCAACAGTAAGTGGTAGCTTGAGTCACTGTGAGGTCACCTACTGGAAATCACCAGCATCCCATTTCCCACTGGCAAAGAGCTCAGCACTGCCCCCTGGGAAACCAAACCTATGCCCAAATCCCATCTGTGTGGGTTTACCTCC s panPan2.chr7 56721611 183 + 162613886 AGCTCGCAGGGCATATGCTTCAGCTAGCATTTCATCACAATCAACAATAAGTGGCAGCTTGAGTCATTGTGAGGTCAGTTCCTGGAAATCACCAGCATCCCGTGTCCCATTGGCAAGGAGCTCAGCTCTGCTCCTTGGATAACCAAACCTGTGCCCAAATCCCATCTGTGTGTGTCTATCTCC i panPan2.chr7 I 10408 C 0 s rheMac8.chr3 55099764 183 + 185818997 AGCTCGCAGGGCATACGCTTCACCTGGCATTTCACCACAATCAACAGTAAGTGGTAGCTTGAGTCATTGTGAGGTCACTTCCTGGAAATCACCAGCATCCTATATCCCATTAGGAAGGAGTTCAGCACTGTTCCATGGATAACCAAACCTATTCCCAAATCCTATCTGTGTGGGTCTATCTCC i rheMac8.chr3 I 5611 C 0 s macFas5.chr3 127693896 183 - 192294377 AGCTCGCAGGGCATACGCTTCACCTGGCATTTCACCACAATCAACAGTAAGTGGTAGCTTGAGTCATTGTGAGGTCACTTCCTGGAAATCACCAGCATCCTATATCCCATTAGGAAGGAGTTCAGCACTGTTCCATGGATAACCAAACCTATTCCCAAATCCTATCTGTGTGGGTCTATCTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8932144 183 - 10413719 AGCTCCCAAGGCATGTGCCTCAGCTGGCATTTCATCACAATCAATAGTAAGTGGTAGCTTGAGTCACTGTGAGGTCACTTTCTGGAAATCACCAGCATCCCATTTTCCACTGGCAAGGAGCTCAGTATAGTCCCTTGGATAACCAAACTCATGTCCAAATCCCATCTATGTGAGTCTATCTCC i macNem1.NW_012013022v1 C 0 C 0 s manLeu1.NW_012100344v1 33977 183 - 148006 AGCTCCCAAGGCATGTGCCTCAGTTGGCATTTCATCACAATCAACAGTAAGTGGTAGCTTGAGTCACTGTGTGGTCACTTACCGGAAATCACCAGCATCCCATTTCCCATTGGCAAGGAGCTCGGCACTGTCCCTTGGAAAACCAAACTTATGCCCAAATCCCATCTGTGTGGGTTTATCTCC i manLeu1.NW_012100344v1 C 0 I 6605 s colAng1.NW_012116633v1 753197 183 + 1536524 AGCTCACACGGCATATGCCTCAGCTGGCATTTCATCACAATCAACAGTAAGTGGTAGCTTGAGTCATTGTGAGGTCAGTTCCTGGAAATCACCAGCATCCCATGTCCCACTGGCAAGGAGCTCAGCACTGCTCCTGGGATAACCAAACCCATGCCCAAATCCCATCTGTGTGGGTCTATCTCC i colAng1.NW_012116633v1 I 10736 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e chlSab2.chr21 124141906 6706 - 127223203 I e nomLeu3.chr17 46788905 4160 - 99891981 I e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=8239.000000 s hg38.chr3_KI270784v1_alt 21179 8 + 184404 TGGGACCC s panPan2.chr7 56721794 8 + 162613886 TGGTACCC i panPan2.chr7 C 0 C 0 s rheMac8.chr3 55099947 8 + 185818997 TGGTACCC i rheMac8.chr3 C 0 T 2284 s macFas5.chr3 127694079 8 - 192294377 TGGTACCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8932327 8 - 10413719 AGGGACCC i macNem1.NW_012013022v1 C 0 C 0 s colAng1.NW_012116633v1 753380 8 + 1536524 TGGTATCC i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e manLeu1.NW_012100344v1 34160 6605 - 148006 I e chlSab2.chr21 124141906 6706 - 127223203 I e nomLeu3.chr17 46788905 4160 - 99891981 I e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=8412.000000 s hg38.chr3_KI270784v1_alt 21187 10 + 184404 TTCCTAACAT s panPan2.chr7 56721802 10 + 162613886 TTCCTAGCAT i panPan2.chr7 C 0 T 2232 s macFas5.chr3 127694087 10 - 192294377 TTCCTAGCAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8932335 10 - 10413719 TTCTTAGCAt i macNem1.NW_012013022v1 C 0 C 0 s colAng1.NW_012116633v1 753388 10 + 1536524 TTCCTAGCAT i colAng1.NW_012116633v1 C 0 T 1604 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e rheMac8.chr3 55099955 2284 + 185818997 T e manLeu1.NW_012100344v1 34160 6605 - 148006 I e chlSab2.chr21 124141906 6706 - 127223203 I e nomLeu3.chr17 46788905 4160 - 99891981 I e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=-292.000000 s hg38.chr3_KI270784v1_alt 21197 2 + 184404 AT s macFas5.chr3 127694097 2 - 192294377 CA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8932345 2 - 10413719 at i macNem1.NW_012013022v1 C 0 I 13545 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e colAng1.NW_012116633v1 753398 1604 + 1536524 T e rheMac8.chr3 55099955 2284 + 185818997 T e manLeu1.NW_012100344v1 34160 6605 - 148006 I e chlSab2.chr21 124141906 6706 - 127223203 I e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56721812 2232 + 162613886 T e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=-513.000000 s hg38.chr3_KI270784v1_alt 21199 13 + 184404 AACCTTCATAACA s macFas5.chr3 127694099 6 - 192294377 ATTCt-------g i macFas5.chr3 C 0 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 33014 2778 - 113584 I e saiBol1.JH378167 169534 3045 + 13147851 I e colAng1.NW_012116633v1 753398 1604 + 1536524 T e rheMac8.chr3 55099955 2284 + 185818997 T e manLeu1.NW_012100344v1 34160 6605 - 148006 I e chlSab2.chr21 124141906 6706 - 127223203 I e macNem1.NW_012013022v1 8932347 13545 - 10413719 I e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56721812 2232 + 162613886 T e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I e panTro5.chr1 222301702 3214 + 228573443 I a score=1092.000000 s hg38.chr3_KI270784v1_alt 21212 2 + 184404 TA s panTro5.chr1 222304916 2 + 228573443 ta i panTro5.chr1 I 3214 C 0 s macFas5.chr3 127694105 2 - 192294377 ta i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 35792 2 - 113584 ta i cerAty1.NW_012005081v1 I 2778 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 169534 3045 + 13147851 I e colAng1.NW_012116633v1 753398 1604 + 1536524 T e rheMac8.chr3 55099955 2284 + 185818997 T e manLeu1.NW_012100344v1 34160 6605 - 148006 I e chlSab2.chr21 124141906 6706 - 127223203 I e macNem1.NW_012013022v1 8932347 13545 - 10413719 I e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56721812 2232 + 162613886 T e gorGor5.CYUI01015383v1 4218029 3214 + 4392246 I a score=1386.000000 s hg38.chr3_KI270784v1_alt 21214 2 + 184404 Ct s panTro5.chr1 222304918 2 + 228573443 ct i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4221243 2 + 4392246 ct i gorGor5.CYUI01015383v1 I 3214 C 0 s macFas5.chr3 127694107 2 - 192294377 tt i macFas5.chr3 C 0 T 2580 s cerAty1.NW_012005081v1 35794 2 - 113584 ct i cerAty1.NW_012005081v1 C 0 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 169534 3045 + 13147851 I e colAng1.NW_012116633v1 753398 1604 + 1536524 T e rheMac8.chr3 55099955 2284 + 185818997 T e manLeu1.NW_012100344v1 34160 6605 - 148006 I e chlSab2.chr21 124141906 6706 - 127223203 I e macNem1.NW_012013022v1 8932347 13545 - 10413719 I e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56721812 2232 + 162613886 T a score=173456.000000 s hg38.chr3_KI270784v1_alt 21216 337 + 184404 tgagaggctgaggtgagacaatcgatttagcccaggagtttgagatcagcctggacgacataactaaatctcatctctaCAaggacgaggtgggaggatcacttgagcccaggaatttgtggccagcctgggcaacaaaagaagaccccatctggccaacatggccaacctggccaccacggtgaaactctgactctacaaaaatgatctgggcatgggtgacatgcgtgtgtagtcctagctacttgggaggttgagatgggaggattgcttgatctcagaaggccaaagctatagtgagctatgatcacatcactgcactccagcctggatggca s panTro5.chr1 222304920 337 + 228573443 tgagaggctgaggtgagacaatcgatttagcccaggagtttgagatcagcctggacaacataactaaatctcatctctacaaggacgaggtgggaggatcacttgagcccaggaatttgtggccagcctgggcaacaaaagaagaccccatctggccgacatggccaacctggccaccgtggtgaaactctgactctacaaaaatgagctgggcatgggtgacatgcatgtgtagtcctagctacttgggaggttgacatgggaggatggcttgatctcagaaggccaaagctacagtgagctatgatcacatcactgcactccagcctagatgaca i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4221245 337 + 4392246 tgagaggctgaggtgagacaatcgatttagcccaggagtttgagatcagcctggacaacataactcaatctcatctctacaaggacgaggtgggaggatcacttgagcccaggaatttgtggccagcctgggcaacaaaagaagaccccatctggccaacacggccaacctggccaccatggcaaaactctgactctacaaaaatgagctgggcatgggtgacatgcatgtgtagtcctagctacttgggaggttgagatgggaggattgcctgatctcaggaggccaaagctatagtgagctatgatcacatcagtgcactccagcctggatgaca i gorGor5.CYUI01015383v1 C 0 C 0 s cerAty1.NW_012005081v1 35796 337 - 113584 cgagaggctgaggtgagacaatcgattttgcccagcagtttgagATCAGCCTGGGTGACACAACTAAATCTCATCTCTACAaggatgaggtgagaggatcacttgagcccaggaatttgtggccagcctgggcaacacaacaagaccccatctggccaacatggccaaactggccaacatggtgaaactccgactctacaaaaatgagctgggcataggtgacatgcaagtgtagtcctagctacttggaaggctgaggagggaggatcgcttgatcacaggagatcaaagctataatgagctatgatcacatcactgcactccagcctggatgaca i cerAty1.NW_012005081v1 C 0 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 169534 3045 + 13147851 I e colAng1.NW_012116633v1 753398 1604 + 1536524 T e rheMac8.chr3 55099955 2284 + 185818997 T e manLeu1.NW_012100344v1 34160 6605 - 148006 I e chlSab2.chr21 124141906 6706 - 127223203 I e macNem1.NW_012013022v1 8932347 13545 - 10413719 I e macFas5.chr3 127694109 2580 - 192294377 T e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56721812 2232 + 162613886 T a score=206425.000000 s hg38.chr3_KI270784v1_alt 21553 269 + 184404 caggaagattctgtctcaaaaaa--aagaaaagaaatat-atatttaatctctgtccctggttcctggcacagagcttc-taaagctcttacaaagacctcagtga--tagatgtgacaggagcatcttttgttttaatatttggtcttggtccc--aggtttct-aacacaagagcctctaagaactttgggatctccagcat-ggtaagaatgcatttgggga---tgttgttgagatgactgggtgact-gcaagctcctaaatttcttcaagaggaggg s panTro5.chr1 222305257 269 + 228573443 cagggagattctgtctcaaaaaa--aagaaaagaaaCat-atatttaatctctgtccccggttcctggtacagagcttc-taaagctcttacaaagacctcagtga--tagatgtgacaggaacatcttttgttttaatatttggtcttggtccc--aggtttct-aacacaagagcctctaagaactttgggatctccagcat-ggtaagaatgcatttgggga---tgttgttgagatgaccgggtgact-gcaagctcctaaatttcttcaagaggaggg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4221582 267 + 4392246 cagg-agattctgtctcaaaaaa--aagaaaagaaatat-atatttaatctctgtccctggttcctggcacagagcttc-taaagctcttacaaagacctcagtga--tagatgtgacaggaacatcttttgttttaatatttggtcttggt-cc--aggtttct-aacacaagagcctctaagaactttgggatctccagcat-ggtaagaatgcatttgggga---tgttgttgagatgactgggtgact-gcaagctcctaaatttcttcaagaggaggg i gorGor5.CYUI01015383v1 C 0 C 0 s macNem1.NW_012013022v1 8945892 280 - 10413719 cagggagattctgtctccaaaaaataagaaaagaaatatagtattacatctctgtccctggtttcttgcacacagcttcttaaagctcttacaaacacctcagtggattgaatgtgataggagtatcttttgttttaatatttggtcttggtcccataggtttctaaacacaagagcatcta--aactttgggttctccagcatgggtaaaatggcatttggggaccttattgttgagatgactgggtgactggcaagctccctaatttcttca-gaggaggg i macNem1.NW_012013022v1 I 13545 I 23 s cerAty1.NW_012005081v1 36133 269 - 113584 cagggagattctgtctcaaaaaa--aagaagagaaatat-gtatttaatctctgtccctggtttctggcacacagcttc-taaagctcttacaaacacctcagtga--tagacgtgataggagtatcttttgttttaacatttggtcttggtccc--aggtttct-aacacaagagcatctaagaactttgggatctccagcat-ggtaagaatgcatctgggga---tgttgttgagatgactgggtgact-gcgagctcctagatttcttcaggaggaggg i cerAty1.NW_012005081v1 C 0 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 169534 3045 + 13147851 I e colAng1.NW_012116633v1 753398 1604 + 1536524 T e rheMac8.chr3 55099955 2284 + 185818997 T e manLeu1.NW_012100344v1 34160 6605 - 148006 I e chlSab2.chr21 124141906 6706 - 127223203 I e macFas5.chr3 127694109 2580 - 192294377 T e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56721812 2232 + 162613886 T a score=4986.000000 s hg38.chr3_KI270784v1_alt 21822 11 + 184404 ctgattaccat s panTro5.chr1 222305526 11 + 228573443 ctgattaccat i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4221849 11 + 4392246 ctgattaccac i gorGor5.CYUI01015383v1 C 0 C 0 s cerAty1.NW_012005081v1 36402 11 - 113584 ctgattgccag i cerAty1.NW_012005081v1 C 0 I 5 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 169534 3045 + 13147851 I e colAng1.NW_012116633v1 753398 1604 + 1536524 T e rheMac8.chr3 55099955 2284 + 185818997 T e manLeu1.NW_012100344v1 34160 6605 - 148006 I e chlSab2.chr21 124141906 6706 - 127223203 I e macNem1.NW_012013022v1 8946172 23 - 10413719 I e macFas5.chr3 127694109 2580 - 192294377 T e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56721812 2232 + 162613886 T a score=223738.000000 s hg38.chr3_KI270784v1_alt 21833 289 + 184404 gcaaccacatggta-agaggcttggaactttcagcctcatg--cactgaactccagggggaagaggggctggagactgacttaatcaccaa---cagccaaaggttttatcaatcatgcttgcataat-aaagcctccataaacaccctgaaaggggtttgcagagctttcagggttgctggacacaggagatgctgggagggtcgcatgttcaacagagggcatgggagctctgtgcccctccgaacttaacttgccctgggtatctttcttttttttgagacaggatcaggctc s panTro5.chr1 222305537 289 + 228573443 gcaaccacatggta-agaggcttggaactttcagcctcatg--cactgaactccagggggaagaggggctggagactgacttaatcaccaa---cagccaaagattttatcaatcatgcttgcataat-aaagcctccataaacaccctgaaaggggtttgcagagctttcagggttgctggacacaggagatgctgggagggtcgcatgttcaacagagggcatgggagctctgtgcccctccgaacttaacttgccctgggtatctttcttttttttgagacaggatcaggctc i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4221860 289 + 4392246 gcaaccacatggta-agaggcttggaactttcagcctcatg--cactgaactccaggaggaagaggggctggagaccgacttaatcaccaa---cagccaaagattttatcaatcatgcttgcataat-aaagcctccataaacaccctgaacggggtttgcagagctttcagggttgctggacacaggagatgctgggagggtcgcatgttcaacagagggcatgggagctctgtgcccctccgaacttaacttgccctgggtatctttcttttttttgagacaggatcaggctc i gorGor5.CYUI01015383v1 C 0 C 0 s macNem1.NW_012013022v1 8946195 287 - 10413719 gcaaccacatgattgagaggcgtggaactttcagcctcatgcccactgaact-caggaggaagaggggctggagac-gacttaatcaccaaacccagccaaa-attttgtcaatcatgcattcacaataaaagcctacataaacaccctgagcagggtttaaagagcttccagggttgctgaacac---agatgctgggagggtggcctgctcaacaga-ggca-gggagcgctgtgcccctcctaacttaccttg-ccTGGGCAtcttccttttttttgagacagggtctggctc i macNem1.NW_012013022v1 I 23 C 0 s cerAty1.NW_012005081v1 36418 286 - 113584 gcaaccacatgatt-agaggcttggaactttcagcctcatg--cactgaactccaggaggaagaggggctggaaactgacttaatcaccaa---tggccaaagattttgtcaatcatgcttgcataat-aaagcctacataaacaccctgaacagggtttaaagagcttccagggttgctgaacac---agatgctgggagggtggcatgctcaacagagggcatgggagcgctgtgcccctcctaacttaccttgccctgggcatcttccttttttttgagacagggtatggctc i cerAty1.NW_012005081v1 I 5 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 169534 3045 + 13147851 I e colAng1.NW_012116633v1 753398 1604 + 1536524 T e rheMac8.chr3 55099955 2284 + 185818997 T e manLeu1.NW_012100344v1 34160 6605 - 148006 I e chlSab2.chr21 124141906 6706 - 127223203 I e macFas5.chr3 127694109 2580 - 192294377 T e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56721812 2232 + 162613886 T a score=140261.000000 s hg38.chr3_KI270784v1_alt 22122 153 + 184404 ttttgtccaagctggagtgcagtggcacaatctcagcttactgt-aacctaagcctccccagtccccagctcaaggtatcctct-catctcagcttccctagtagttggaactctaggtgcacaacaccaca-ccagttattattattatttttta s panTro5.chr1 222305826 153 + 228573443 ttttgtccaagctggagtgcagtggcacaatctcagcttactgt-aacctaagcctccccagtccccagctcaaggtatcctct-catctcagcttccctagtagttggaactctaggtgcacaacaccaca-ccggttattattattatttttta i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4222149 153 + 4392246 ttttgtccaagctagagtgcagtggcacaatctcagcttactgt-aacctaagcctccccagtccccagctcaaggtatcctct-catctcagcttccctagtagttggaactctaggtgcacaacaccaca-ccggttattattattatttttta i gorGor5.CYUI01015383v1 C 0 C 0 s macNem1.NW_012013022v1 8946482 152 - 10413719 ttttgtccaagctagagtgcagtggcacaatctcagttcactgtgaatctaagcctccccagtccccagctcaaggcgtcctctccatctcagcttccctagtagttggaactcta--ggcacaacacaacatccggttaTTGTTAATA-ttttt- i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 36704 153 - 113584 ttttgtccaagctagagtgcagtgtcacaatctcagctcactgt-aatctaagcctccccagtccccagctcaaggcgtcctct-catctcagcttccctagtagttggaactctaggggcacaacacaacatccggttattattactatttttt- i cerAty1.NW_012005081v1 C 0 C 0 s saiBol1.JH378167 172579 139 + 13147851 tcttgcccaggctggagtgcaatcgtgcaatcccaggtcactgc-aacct-------ccacgtcatgggttcaagtaattctcc-tgcctcagcctcctaagtagcagggattacaggtgtgtgtccccatacctggctaatatttgt-------- i saiBol1.JH378167 I 3045 C 0 e aotNan1.NW_018487315v1 6190697 3737 - 15679484 I e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e colAng1.NW_012116633v1 753398 1604 + 1536524 T e rheMac8.chr3 55099955 2284 + 185818997 T e manLeu1.NW_012100344v1 34160 6605 - 148006 I e chlSab2.chr21 124141906 6706 - 127223203 I e macFas5.chr3 127694109 2580 - 192294377 T e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56721812 2232 + 162613886 T a score=1911.000000 s hg38.chr3_KI270784v1_alt 22275 1 + 184404 a s panTro5.chr1 222305979 1 + 228573443 a i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4222302 1 + 4392246 a i gorGor5.CYUI01015383v1 C 0 C 0 s macNem1.NW_012013022v1 8946634 1 - 10413719 a i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 36857 1 - 113584 a i cerAty1.NW_012005081v1 C 0 C 0 s saiBol1.JH378167 172718 1 + 13147851 a i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6194434 1 - 15679484 a i aotNan1.NW_018487315v1 I 3737 C 0 e cebCap1.NW_016108107v1 285627 12074 + 373793 I e calJac3.chr2 1425200 23395 + 204313951 I e colAng1.NW_012116633v1 753398 1604 + 1536524 T e rheMac8.chr3 55099955 2284 + 185818997 T e manLeu1.NW_012100344v1 34160 6605 - 148006 I e chlSab2.chr21 124141906 6706 - 127223203 I e macFas5.chr3 127694109 2580 - 192294377 T e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56721812 2232 + 162613886 T a score=303926.000000 s hg38.chr3_KI270784v1_alt 22276 138 + 184404 ttttttatagagacaggttttcaccatgttgcccaggctggtctcaaactcct-gagtttaagcgatcct--------cccaccttggcctcccaaagtgctgagattacaggcatgagccactgcatccagcatgcacgtctcttt s panTro5.chr1 222305980 138 + 228573443 ttttttatagagacaggttttcaccatgttgcccaggctggtctcaaactcct-gagtttcagcgatcct--------cccaccttggcctcccaaagtgctgagattacaggcatgagccactgcatccagcatgcacgtctcttt i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4222303 138 + 4392246 ttttttatagagacaggttttcaccatgttgcccaggctggtctcaaactcct-gagtttaagcgatcct--------cccaccttggcctcccaaagtgctgagattacaggcatgagccactgcatccagcatgcacgtctcttt i gorGor5.CYUI01015383v1 C 0 C 0 s macNem1.NW_012013022v1 8946635 146 - 10413719 ttttttgtagagaaccg-ttttaccatgttgcccaggctggtctgaaactcctggagtttaagcgatcctcccactcgcccacctcagcctcccaaagtgctgggattacaggcataagccaccacatccagcAtgtacatctcttt i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 36858 137 - 113584 ttttttgtagagacagt-tttcaccatgttgcccaggctggtctgaaactcct-gagtttaagcgatcct--------cccacctcggcctcccaaagtgctgagataacaggcgtgagccaccgcatccagcatgttcatctcttt i cerAty1.NW_012005081v1 C 0 C 0 s saiBol1.JH378167 172719 138 + 13147851 ttttttatagagacagggtttccccacgttgtccaggctgatctcaaactcct-gagtttaagcgatcct--------cccaccttgacctcccaaagcgctgggatcacaggcgtgagccactgcacccagcATGCAcatctcctt i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 297701 138 + 373793 ttttttatagagacagggtttccccatgttgtccaggctgatctcaaactcct-gagtttaagcgatgct--------cccaccttgacctcccaaagtgctgggatcacaggcgtgagccactgcacccagcATGCAcatctcctt i cebCap1.NW_016108107v1 I 12074 C 0 s aotNan1.NW_018487315v1 6194435 138 - 15679484 ttttttatagagacaaggtttcaccatggtgcccaggctgatctcaaactcct-gagtttaagcgatcct--------cccacctcgacctcccaaagtgctggggtcacaggcgtgagccactgcacccggcATGCAcatctcctt i aotNan1.NW_018487315v1 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I e colAng1.NW_012116633v1 753398 1604 + 1536524 T e rheMac8.chr3 55099955 2284 + 185818997 T e manLeu1.NW_012100344v1 34160 6605 - 148006 I e chlSab2.chr21 124141906 6706 - 127223203 I e macFas5.chr3 127694109 2580 - 192294377 T e nomLeu3.chr17 46788905 4160 - 99891981 I e panPan2.chr7 56721812 2232 + 162613886 T a score=294869.000000 s hg38.chr3_KI270784v1_alt 22414 99 + 184404 cattgactgtttctgagatgtatccttcacaatgaaccagtaataggaaatgaactggccagatgtggt-ggctcacatctgtaatcccagcactttcag s panTro5.chr1 222306118 99 + 228573443 cattgactgtttctgagatgtatccttcacaatgaaccagtaataggaaatgaactggccagatgtggt-ggctcacatctgtaatcccagcactttcag i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4222441 99 + 4392246 cattgactgtttctgagatgtatccttcacaatgaaccagtaataggaaatgaactggccagatgtggt-ggctcacatctgtaatcccagcactttcag i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46793065 99 - 99891981 CAttgactgtttctgaaatgtatcctt-gcaatgaaccagtaataggaaatgaactggccagatgtggtgggctcacatctgtaatcctagcactttaag i nomLeu3.chr17 I 4160 C 0 s macNem1.NW_012013022v1 8946781 99 - 10413719 cactggctgtttctgagatgtatcctttacaatgaaccagtaataggaaatgaactggcccgatgtggt-ggctcacatctgtaatcccagcactttaag i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 36995 99 - 113584 cactggttgtttctgagatatatcctttacaatgaaccagtaataggaaatgaactggccagatgcggt-ggctcacatctgtaatcccagcacttcaag i cerAty1.NW_012005081v1 C 0 C 0 s saiBol1.JH378167 172857 99 + 13147851 cactggttgtttctgagatgtgtcctttacagtgaaccaggaataggaaatgaactgaccagatgtggt-ggctcatatctgtaatcccagcactttaag i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 297839 99 + 373793 cactggctgtttctgagatgtgtcctttacggtgaaccaggaataggaaatgaactgaccagatgtggt-ggctcacatctgtaatcccagcactttaag i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6194573 99 - 15679484 cactggctgtttccgagatgtgtcctttacagtgaaccaggaacaggaaatgaactgaccagatgtggt-ggctcacatctgtaatctcagcactttaag i aotNan1.NW_018487315v1 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I e colAng1.NW_012116633v1 753398 1604 + 1536524 T e rheMac8.chr3 55099955 2284 + 185818997 T e manLeu1.NW_012100344v1 34160 6605 - 148006 I e chlSab2.chr21 124141906 6706 - 127223203 I e macFas5.chr3 127694109 2580 - 192294377 T e panPan2.chr7 56721812 2232 + 162613886 T a score=600738.000000 s hg38.chr3_KI270784v1_alt 22513 203 + 184404 aggctgaggtgggaggatcacttgagaccaggaatttgtggccagcctggccaacacaa-caagaccccatct--------atacaaaaaataaaaga----aactagccagatgt-ggtggtgcaggcatgtagtctcagctactagggaggctgaggtgggagaaccactggaacccagacaatcaaggctgcaatgagctatg-------actgcacc---------------------------------------------------att s panTro5.chr1 222306217 203 + 228573443 aggctgaggtgggaggatcacttgagaccaggaatttgtggccagcctggccaacacaa-caagaccccatct--------atacaaaaaataaaaga----aactagccagatgt-ggtggtgcaggcatgtagtctcagctactagggaggctgaggtgggagaaccactggagcccagacaatcaaggctgcaatgagctatg-------actgcacc---------------------------------------------------att i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4222540 203 + 4392246 aggctgaggtgggaggatcacttgagaccaggaatttgtggccagcctggccaacacaa-caagaccccatct--------atacaaaaaataaaaga----aactagccagatgt-ggtggtgcaggcatgtagtctcagctactagggaggctgaggtgggagaaccactggagcccagacaatcaaggctgcaatgagctatg-------actgcacc---------------------------------------------------att i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46793164 199 - 99891981 aggcagaggtgggaggatcacttgagaccaggaatttgtggccagcctgggcaacacaaccaaaaccccatct--------atacaaaaaat-----a----aattagccagatgt-ggtggtgcaggtatgtagtctcagctactagggaggctgaggtgggagaaccattggagcccaggcagtcaaggctgcagtgagctatg-------actgcacc---------------------------------------------------att i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127691529 274 - 192294377 aggatgaggtgggaggatcacttgagcccaggaatttgtggccagcctgggcaacacaa-caagaccccatctggccaacatggtgaaacaccgactacaaaaatgagctaggcatgggtgacatgcatgtgtagtcccagctacttcggaggctgaggtgggagaatcgcttgatctcaggaggtcaaagctataataaactatgatacatcatcgcaccccagcctggatgacacagggagattctgtcccaaaaaaaaagaaaagaaaTATA i macFas5.chr3 T 2580 C 0 s macNem1.NW_012013022v1 8946880 207 - 10413719 aggctgaggtgggaggatcgcttgagcccaggaatttgtggccagactgggcaacataa-caagaccccattt--------ctacgaaaaataaaagaaattaattagccagatgt-agtggtgcagacgtgtagtctcagctaatagggaggctgaggtgggaggaccacttgagcccaggcagtcgaggctgcagtgagctatg-------actgcacc---------------------------------------------------act i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 37094 200 - 113584 aggctgaggtgggaggatcgcttgagcccaggaatctaaggccaacttgggcaacacaa-caagaccccatca--------atgcaaaaaataaaaga----aattagccagatgt-ggtggtacaggcat---gtctcagctactagggaggctgaagtgggagaaccactggagcccaggcagtcaaggctacagtaagctatg-------actgcacc---------------------------------------------------act i cerAty1.NW_012005081v1 C 0 C 0 s saiBol1.JH378167 172956 202 + 13147851 tgactgaggtgggagaattgcttggacccaggaatttgtggccagcctgagcaacaaaa-caagaccctgtct--------caaccaaaaataaaata----aattaaccacatgt-ggtggtacaggcgtgtggtctcagttactagggaggctgaggtgggaggaccacttaaacccaggcagtagaggctgcagtgagctatg-------actacata---------------------------------------------------ct- i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 297938 202 + 373793 tgattaaggtgggagaattgcttggacccaggaatttgtagccagcctgagcaacaaaa-caagaccccatct--------caacaaaaaataaaata----aattagccagatgt-ggtggtgcaggtgtgtggtctcagctactagggaggctgacatgggaggaccacttaaacccaggcagtcgaggctgcagtgaggtatg-------actgcaca---------------------------------------------------ct- i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6194672 202 - 15679484 tgattgaggtgggagaattgcttggacccaggaatttgtggccagcctgagcaacaaaa-caagaccccatct--------caacaaaaaataaaata----aattagccagatgt-ggtggtgcgggtgtgtggtctcagctactagggaggctgaggtgggaggaccacttaaacccaggcagtcgaggctgcagtgagctatg-------actgcaca---------------------------------------------------ct- i aotNan1.NW_018487315v1 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I e colAng1.NW_012116633v1 753398 1604 + 1536524 T e rheMac8.chr3 55099955 2284 + 185818997 T e manLeu1.NW_012100344v1 34160 6605 - 148006 I e chlSab2.chr21 124141906 6706 - 127223203 I e panPan2.chr7 56721812 2232 + 162613886 T a score=351998.000000 s hg38.chr3_KI270784v1_alt 22716 60 + 184404 gcacaccagcctgggcaacaaaataagaccctctctctcagaaa----aaaagaaaataaactg s panTro5.chr1 222306420 60 + 228573443 gcacaccagcctgggcaacaaaataagaccctctctctcagaaa----aaaagaaaataaactg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4222743 60 + 4392246 gcacaccagcctgggcaacaaaataagaccctctctctcagaaa----aaaagaaaataaactg i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46793363 60 - 99891981 gcacaccagcctgggcaaaaaaataagaccctctctctcagaaa----aaaagaaaataaactg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55097671 60 + 185818997 gcacaccagcctgggcaacaaaataagaccgtctctctcagaaa----aaaagaaaataaaCtg i rheMac8.chr3 T 2284 C 0 s macFas5.chr3 127691803 60 - 192294377 gcacaccagcctgggcaacaaaataagaccgtctctctcagaaa----aaaagaaaataaactg i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8947087 55 - 10413719 gcacaccagcctgggcgataaaatgagaccctgtctctcagaaa---------aaaataaactg i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 37294 62 - 113584 gcacaccagcctgggcaacaaaataagagcctctctcttgggaaaaaaaaaagaaaataaac-- i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124148612 60 - 127223203 gcacaccagcctgggcaacaaaataagaccgtttctctcagaaa----aaaagaaaataaactg i chlSab2.chr21 I 6706 C 0 s manLeu1.NW_012100344v1 40765 60 - 148006 gcacaccagcctgggcaacaaaataagaccgtctctctcagaaa----aaaagaaaataaactg i manLeu1.NW_012100344v1 I 6605 C 0 s saiBol1.JH378167 173158 59 + 13147851 gcgcaccagcctgggcaacaaaaagagaccctgtctctcagaaa----acaagaaaac-agctg i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 298140 59 + 373793 gcacaccagtctgggcaacaaaatgagaccttatctctcagaaa----aaaagaaaat-agctg i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6194874 59 - 15679484 gcacaccagcctgggcaacaaaatgagaccctgtctctcagaaa----aaaagaaaac-agctg i aotNan1.NW_018487315v1 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I e colAng1.NW_012116633v1 753398 1604 + 1536524 T e panPan2.chr7 56721812 2232 + 162613886 T a score=4188966.000000 s hg38.chr3_KI270784v1_alt 22776 587 + 184404 tttttctgagttccgtaaactgttctagcaaattattaaacccaagaagacagttacgggaacccccgattggtaacaggttggtcaaaagtat-ggtgacaacttaggacttgccattgtcatctgaagtgaggatggcctcgtgggactgagcccctaacttgtggggtctgtgctaactccaggtagtgtcagaataaagtcatgggatacccagttaatatccagagcactgaagaatctggtgtagaaactccatacgtacattcagtcggaagtgtgtgagtagagacaaacaTGGGC--TTTTCTGTCAC----CTACCTGCTTAACTGCATAGgagaggcaatatgtggtgctcatgaacaaagcaaacattaaagtcagaccagacccaacatttgactcagtcttaatatccaggtgagcctgcgcaaatcattcattattcctaaggttttcatcactccattcataaaatggggataactgtggcacctacatgtgattctgtgagaattaacgaaatattatgcttgGGGTTATTGTGATCATTATACCTGTTCCAAACTATTTGACAAGGACAGTGATGG s panTro5.chr1 222306480 587 + 228573443 tttttctgagttccataaactgttctagcaaattattaaacccaagaagacagttatgggaacccccgattggtaacaggttggtcaaaagtac-ggtgacaacttaggacttgccattggcatctgaggtgaggatggcctcgtgggactgagcccctaacttgtggggtctgtgctaactccaggtagtgtcagaataaagtcatgggatacccagttaatatccagagcactgaagaatttggtgtagaaactccatacatacattcagtcggaagtgtgtgagtagagacaaacatgggt--ttttcTGTCAC----CTACCTGCTTAACTGCATAGgagaggcaatatgtggtgctcatgaacaaagcaaacattaaagtcagaccagacccaacatttgactcagtcttaatatccaggtgagcctgcgcaaatcattcattattcctaaggttttcatcactccattcataaaatggggataactgtggcacctacatgtgattctgtgagaattaacgaaatattatgcttgGGGTTATTGTGATCATTATACCTGTTCCAAACTATTTGACAAGGACAGTGATGG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56719580 590 + 162613886 tttttttgagttctgtaaactgttctagcaaattattaaacccaagaagagggtcatgggaa-ccccgatttgtaacaggttggtcaaaagtacaggtaacaacctaggacttgccattggcatctgaaatgagggtggtctcgtggtactgagcccctaaactgtggggtctgtgtcaactccaggtagtgtcagaataaaattgtgggatacccagttaatatccagagcattggagaacttggtgtagaaactccacacacacattcagtcagaagtgtgtgagtagagactaacatgggc--ttttctttcacCTGTCTACCTGCTTAACTGCATAGgagaggcaatacgtggtgctcatgaacaaagcaaacattaaagtcagaccagacccgacatttgactcagtcttaatatccaggtgagcttgggcaaatcactcattattcctaa-gtcttcatcacttcattcacaaaatggggataactgtggcacctacctgtgattttgtgagaactaatgaaataCTATGATTGGTGTTATTGTGATCATTATACCTATTCTAAACTATTTGACAAGGACAGGGATGC i panPan2.chr7 T 2232 C 0 s gorGor5.CYUI01015383v1 4222803 586 + 4392246 tttttctgagttccgtaaactgttctagcaaattattaaacccaagaagacagttatgggaacccccgattggtaacaggttggtcaaaagtat-ggtgacaacttaggacttgccattggcatctgaagtgaggatggcctcgtgggactgagcccctaacttgtggggtctgtgctaactccaggtagtgtcagaataaagtcatgggatacccagttaatatccagagcactgaagaatttggtgtagaaactccatacatacattcagtcagaagtgtgtgagtagagacaaacaTGGGC--TTTTCTGTCAC----CTACCTGCTTAACTGCATAGgagaggcaatatgtggtgctcatgaacaaagcaaacattaaagtcagaccagacccaacatttgactcagtcttaatatccaggtgagcctgcacaaatcattcattattcctaa-ggcttcatcactccattcataaaatggagataactgtggcacctacatgtgattctgtgagaattaacgaaatattatgcttgGGGTTATTGTGATCATTATACCTGTTCCAAACTATTTGACAAGGACAGTGATGG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46793423 591 - 99891981 tttttctgagttctgtaaactgttgtagcaaattattaaacccaagaatagagttatgggaacccctgacttgtaacaggttggtcaaaagtacaggtgacaacctaggacttgccattagcatctgaagtgaggatggtctcgtgggactgagcccctaacttgtggggtctgtgctaactccaggtagtgtcagaataaaatcgtgggatacccagttaatatccagagcactggagaatttggtgtagaaactccatacatacattcagtcggaagtgtgtgggcagagacaaacatgggc--ttttctttcacCTGTCTACCTGCTTTACTGCATAGgagaggcaatatgtggtgctcatgaacaaagcaagcattaaagtcagaccagacccaacatttgactcagtcttaatatccaggtgagcttgggcaaatcactcattattcctaa-gtcttcatcacttcattcgtaaaatggggataactgtggcaccaacctgtgattctgtgaggattaacgaaatattatgcttgGTGTTATTGTGATCATTATACCTATTCTAAACTATTTGACAAGGACAGTGATGG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55097731 591 + 185818997 tttctctgagttctgtaaactgttctagcaaattattaaacccaagaagagagttatgggaacccctgatttgtaacaggttggtcaaaagtacaggtgacaacctaggacttgccactggcatctcaagtgaggacagtctcgtgggactgagcccctaatttgtggagtctgtgctaagtccaggtagtatcagaataaaatcatgggatacccagttaatatccagagcactggagaatttggtgtagaaactccatacatacattcagtcggaagtgtgtgagtagagacaaacaCGGGC--TTTTCTGTCACCTGTCTACCTGCTTAACTGCATAGgagaggcaatatgtggtgctcatgaacaaagcaagcattaaagtcagaccagacccaacatttgactcagtcttaatatccaggtgagcttgagcaaatcactcattattcctac-gtcttgatcacttcattcataaaatggggataactgtggcacctacctgtgattctgtgagaattactgaaatactatgcttgGTGTTATTGTGATCATTATACCTATTCCAAACTATCTGACAAGGACTGTGATGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127691863 591 - 192294377 tttctctgagttctgtaaactgttctagcaaattattaaacccaagaagagagttatgggaacccctgatttgtaacaggttggtcaaaagtacaggtgacaacctaggacttgccactggcatctcaagtgaggacagtctcgtgggactgagcccctaatttgtggagtctgtgctaagtccaggtagtatcagaataaaatcatgggatacccagttaatatccagagcactggagaatttggtgtagaaactccatacatacattcagtcggaagtgtgtgagtagagacaaacaCGGGC--TTTTCTGTCACCTGTCTACCTGCTTAACTGCATAGgagaggcaatatgtggtgctcatgaacaaagcaagcattaaagtcagaccagacccaacatttgactcagtcttaatatccaggtgagcttgagcaaatcactcattattcctac-gtcttgatcacttcattcataaaatggggataactgtggcacctacctgtgattctgtgagaattactgaaatactatgcttgGTGTTATTGTGATCATTATACCTATTCCAAACTATCTGACAAGGACTGTGATGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8947142 589 - 10413719 tttttctgagttctgtaaactgttctagcaaattattaaacccaagaaggcggtcatgggaacccctgatttataacagattggtcaaaagtacaggtgacaacctaggacttgccattggcatctgaaatgagggtggtctcgtgggactgagcccctcatctgtggggtctgtgccaactccaggtagtgtcagaataaaattgtgggatacccagttaatatccagagcattggagagtttggtgtagaaactccacacacacattcagtcagaagtgtgtgaggagagacaaacacaggc--ttttctttcACCTGTCTACCTGCTTAACTGCATAGgagaggcaacacgtggtgctcatgaacaaagcaagcattaaagtcagaccagacccgacatttgactcagtcttaatatccaggcgagcttgggcaaatcactcattatccctaa-gtcttcatcacgtcattcataaaatggggataactgtggcacctgcctgtgattttatgagaactaatgaaatactatgcttgGTGTTAGTGTGATCATTATACT--ATCCAAACTATCTGACAAGGACTGTGATGG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 37356 582 - 113584 tttttctgagttctgtaaactattctagcaaattattaaacccaagaagagagttatgggaacccctgatttgtaacaggttggtcaaaagtacaggtgacaacctaggacttgccactggcatctgaagtgaggatggtctcgtgggactgagcccctaacttgtggggtctgtgctaactccaggtagtgtcagaataaaatcgtggcatacccagttaatatccagagcattggtgaatttggtgtagaaactccatacatacattcagtcggaagtgtgtgaatagagacaaacaCGGGC--TTTTCTTTCACCTGTCTACCTGCTTAACTGCATAGAagaggcaatacgtggtgctc-------aagcaagcattaaagtcagaccagacccaacatttgactcagtcttaatatccaggtgagcttgggcaaatcactcttcactcccaa-gtcttcatcacttcattcataaaatgaggacaactgtggcacctacctgtgattctgtgagaattaactaaatattatgcttggtgttattgtgatcattatact--atccaaaCTATCTGACAAGGACTGTGATGG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124148672 590 - 127223203 tttctctgagttctggaaactgttctagcaaattattaaacccaagaagagagttatgggaacccctgatttgtaacaggttggtcaaaagtacaggtgacaacctaggacttgccactggcatctgaagtgaggacagtctcgtgggactgagcccctaacttgtggagtctgtgctaagtccaggtagtatcagaataaaatcatgggatacccagttaatatccagagcattggagaatttggtgtagaaactccatacatacattcagtcggaagtgtgtgagtagagacaaacaCGGGC--TTTTCTGTCACCTGTATACCTGCTTAACTGCATAGgagaggcaatatgtggtgctcatgaacaaagcaagcattaaagtcagaccagacccaacacttgactcag-cttaatatccaggtgagcttgagcaaatcactcattattcctat-gtcgtcttcacttcattcataaaatggggataactgtggcacctacctgtgattctgtgagaattactgaaataCTATGTTTGGTGTTACTGTGATCATTATACCTATTCCAAACTATCTGACAAGGACTGTGATGG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 40825 589 - 148006 tttctctgagttctgtaaactgttctagcaaattattaaacccaagaagagagttatgggaacccctgatttataacaggttggtcaaaagtacaggtgacaacctaggacttgccactggcatctgaagtgagg--agtctcgtgggactgagcccctaacttgtggagtctgtgctaagtccaggtagtttcagaataaaattgtgggatacccagttaatatctagagcactggagaatttggtgtagaaactccatacatacattcagtcggaagtgtgtgagtacagacaaacaCGGGC--TTTTCTGTCACCTGTCTACCTGCTTAACTGCATAGgagaggcaatatgtggtgctcatgaacaaagcaagcattaaagtcagaccagacccaacatttgactcagtcttaatatccaggtgagcttgagcaaatcactcattattcctat-gtcttcatcacttcattcataaaatggggataactgtggcacctacctgtgattctgtgagaatcactgaaatactatgcttgGTGTTATTGTGATCATTATACCTATTCCAAACTATCTGACAAGGACTGTGATGG i manLeu1.NW_012100344v1 C 0 C 0 s saiBol1.JH378167 173217 588 + 13147851 tttttctgagttctgtaagctgttccaggaaatgactaaatccacgaggggggtcatggaaacccctgatttgtaacaggttggtcaaaagttcaggtgacaacctagtacttgccactggcatgtgaggtgagggcagtctcatgggactgagcccctaaactgcagggtctgcaccagctccaggtagtgtcagaacaatattgtgggataccaagttaatatccagagcactcaagaatttggtgtagaaactccacacacacattcagtcagaaatgtgtgactagagagaaacacaggc-tttttctttcac----CTACCTGCTTAACTGCACAGgagaagcaatacgtggtgctcatgaacagagcaagcattaaagtcacaccaggccctacatctgactcagtcttaatatccatgtgagcttggtgaaagcactcattatccccaa-gtctttatcacttcattcagaaaatggggctaactgtggcacctgcctgtgattttgggagaattcatgacataatATGCTTGATGTTATTGCGATCATCACAGCTATTCCAAACTATTTGACATGGACAGTGATGG i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 298199 586 + 373793 tttttctgagttctgcaagctgttctaggaaatgactaaatccaagaagggggtcatggaaacccctgatttgtaacaggttggtcaaaagtacaggtgacaacctagtacttaccactggcatgtgaagtgagggtggtctcgtgggactgagcccctaacccgtggggtctgcaccagctccaggtagtgtcagaacaatattgtgggataccaagttaatatccagagcactggagaatttggtgtagaagctccacacacgcattcagtcagaaatgtgtgactagagagaaacacaggcttttttttttcac----ctacCTGCTTAACTGCATAGgagaagcaatacgtcgtgctcatgaacagagcaggcattaaagtcacaccaggccctgcatctgactcagtcttagtatccatgtgagcttgggcgaagcactaattat---caa-gtcttcatcacttcattcagaaaatggggctaactgtggcacctgcctgtgattttgggagaattcatgaaataatATGCTTGATGTTATTGTGATCACCACAGCTATTCCAAACTATTTCACAGGGACAGTGATGG i cebCap1.NW_016108107v1 C 0 C 0 s aotNan1.NW_018487315v1 6194933 588 - 15679484 tttttctgagttctgtaagctgttctagcaaatgactaaatccaagaacggggtcatggaaaccgctgatttgtaacatgttggtcaaaagtacaggtgacaacctagtacttgtcattggcatgtgaagtgagggcagcctcatgggactgagcccctaacctgtagggtctgcgccagctccaggtagtgtcagaacaatattgtgggatactcagttaatatccaaggccctggagaatttggtgtagaaactccacacacacattcagtcagaaatgtgtggctagagagaaacacaggc-ttttttttccCC----CTACCTGCTTAACTGTATAGgagaagcaacacgtggtgctcatgaacagagcaagcattaaagtcacaccaggccctacatctgactcagtcttaatatccatgtgagcttgggtaaaacactcattatccccaa-gtagtcatcacttcattcagaaaatggggctaactgtggcacctgcctgtgattttgggagaattcataaaataTTATGTTTGATGTTATTGTGATCATCACAGCTATTCCAAACCATCTGACAGGGACAGTGATGG i aotNan1.NW_018487315v1 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I e colAng1.NW_012116633v1 753398 1604 + 1536524 T a score=211339.000000 s hg38.chr3_KI270784v1_alt 23363 39 + 184404 ATGAAGACATCAAAAAATCAGAAACTGCAATGAGGTCTC s panTro5.chr1 222307067 39 + 228573443 ATGAAGACATCAAAAAATCAGAAACTGCAATGAGTTCTC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56720170 39 + 162613886 AGGATAACATTAACAGATTAGAAACTGTAATGAGGTCTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4223389 39 + 4392246 ATGAAGACATCAAAAAATCAGAAACTGCAATGAGGTCTC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46794014 39 - 99891981 ATGACAACATCAAAAAATTAGAAACCATAGTGAGATCTC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55098322 39 + 185818997 ATGATAACATGAAAAAATTAGAAACTGTAGTCAGGTCTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127692454 39 - 192294377 ATGATAACATGAAAAAATTAGAAACTGTAGTCAGGTCTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8947731 39 - 10413719 ATGATAACATCAAAACATTAGAAACTGTAGTCAGGTCTC i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 37938 39 - 113584 ATGATAACATCAAAAAATTAGAAACTGTAGTCAGGTCTC i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124149262 39 - 127223203 ATGATAACATCAAAAAATTAGAAACTGTAGTCAGGTCTC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 41414 39 - 148006 ATGATAACATCAAAAAATTAGAAACCATAGTCACGTCTC i manLeu1.NW_012100344v1 C 0 C 0 s saiBol1.JH378167 173805 39 + 13147851 ATGATGACATCACAAGATTAGAAATTGTAATGAGGTCTC i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6195521 39 - 15679484 ATTATGACATCACAAGATTAGAAACTGTAATGAAGTCTC i aotNan1.NW_018487315v1 C 0 C 0 e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e colAng1.NW_012116633v1 753398 1604 + 1536524 T a score=11121.000000 s hg38.chr3_KI270784v1_alt 23402 3 + 184404 TCA s panTro5.chr1 222307106 3 + 228573443 TCA i panTro5.chr1 C 0 C 0 s panPan2.chr7 56720209 3 + 162613886 TTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4223428 3 + 4392246 TCA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46794053 3 - 99891981 TCA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55098361 3 + 185818997 TCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127692493 3 - 192294377 TCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8947770 3 - 10413719 CCA i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 37977 3 - 113584 CCA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124149301 3 - 127223203 TCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 41453 3 - 148006 TCA i manLeu1.NW_012100344v1 C 0 C 0 s aotNan1.NW_018487315v1 6195560 3 - 15679484 TTG i aotNan1.NW_018487315v1 C 0 C 0 e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 753398 1604 + 1536524 T a score=573693.000000 s hg38.chr3_KI270784v1_alt 23405 89 + 184404 GGCAAAATTCCATACAAGCAAATTACTGTGTCTACAAAGCATTCCTGCCACACTTAATTCACCATTCCCTGAACAGAATATGCCATCTT s panTro5.chr1 222307109 89 + 228573443 GGCAAAATTCCATACAAGCAAATTACTGTCTCTACAAAGCATTTCTGCCACACTTAATTCACCATTCCCTGAACAAAATATGCCATCTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 56720212 89 + 162613886 GGCAAAATTCCATACAAGCAAATTACTGTCTCTCCAAAGCATTCCTGCCACACTTAATTCACCATTCCCTGAATAAAATGTGCCATCTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4223431 89 + 4392246 GGCAAAATTCCATACAAGCAAATTACTGTGTCTACAAAGCATTCCTGCCACACTTAATTCACCATTCCCTGAACAAAATACGCCATCTT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46794056 89 - 99891981 GGCAAAATTCCATACAAGCAAATTACGGTCTCTCCAAAGCATTCCTGCCACACTTAATTCACCATTCCCTGAACAAAATGTGCCATCTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55098364 89 + 185818997 GGCAAAATTCCATACAAGCAGACTACTGTCTCTACAAAGCATtcctgccacacttaattcatcattccctgaacaaaatgtgacatctt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127692496 89 - 192294377 GGCAAAATTCCATACAAGCAGACTACTGTCTCTACAAAGCATTCCTGCCACACTTAATTCATCATTCCCTGAACAAAATGTGACATCTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8947773 89 - 10413719 GGCAAAATTCCATCCAAGCAAATTACTGTCTCTACAAAGCATTCCTGCTACACTTAATTCACCATTCCCTGAACAAAATGTGCCATCTT i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 37980 89 - 113584 GGCAAAATTCCATCCAAGCAAATTACTGTCTCTACAAGGCATTCCTGCTACACTTAATTCACCATTCCCTGAACAAAAGTGCCCATCTT i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124149304 89 - 127223203 GGCAAAATTCCATACAAGCAGACTACTGTCTCTACAAAGCATTCCTGCCACACTTAATTCACCATTCCCTGAAAAAAAAGTGACATCTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 41456 89 - 148006 GGCAAAATTCCATACAAGCAGACTACTGTCTCTACAAAGCATTCCTGCCACACTTAATTCAGCATTCCCTGAACAAAATGTGCCATCTT i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 751794 89 + 1536524 GGCAAAATTCCATACAAGCAAATTACTGTCTCTCCAAAGCATTCCCACCACACTTAATTCACCATTTCCTGAACAAAATGTGCCATCTT i colAng1.NW_012116633v1 T 1604 C 0 s aotNan1.NW_018487315v1 6195563 89 - 15679484 GGCAAAATTCCATAGAAGCAAATTACCGTCTCTCCAAAGTATTCCTGCCAAACTTAATTCACCATTTCCTGAACAAAATGTGCCATCTT i aotNan1.NW_018487315v1 C 0 I 8750 e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C a score=2609742.000000 s hg38.chr3_KI270784v1_alt 23494 501 + 184404 CGTTGTTCAGGTCTGTACAGTGCTGGTTTCCCTTCCCGGACAGTTTGCGCTATCCCATCCCGGCCCATTCCCCAtccctccacctccc-ccttccctccccactctcatacaactcttcctcatctttcaggacttggcttcaa-tgtcaccttaactggaagcttctctcactctccagAAGAGCTTCCCATTGCACCTGATGCATGGGAAACATAATTTGATCATTTTTAAGTTACAGTCCAAATCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCACAAGTCTTTCATGGTAGATCCAGCTGGAAGTGACAAAAAGACA-TCTTTTGACATAAAGGGATGACACAGACAGACATAAGTTCTTAAATGTCTTAAATGTTA----TGTGAGAATTAAACAGAATTCAAAGACTTGTGGGGAGCACTTAGG-----AAGTTACTGGGAATGTCAT-GAAGGGTTAAtttg---------------tattttattttattttttgagac--a s panTro5.chr1 222307198 499 + 228573443 CATTGTTCAGGTCTGTACGGTGCTGGTTTCCCTTCCCGGGCAGTTTGCGCTatcccatcccagcccattccccatccctccacctccc-ccttccctccccaCTCTCATACAACTCTTCCTCATCTTTCAGGACTTGGCTTCAA-TGTCACCTTAACTGGAAGCTTCTCTCCCTCTCCAGAAGAGCTTCCCATTGCACTTGATGCATGC--ACTATTATTTGATCATTTTTAAGTTACAGTCCAAATCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGATCCAGCTGGAAGTGACAAAAAGACA-TCTTTTGACATAAAGGGATGACACAGACAGACATAAGTTCTTAAATGTCTTAAATGTTA----TGTGAAAATTAAACAGAATTCAAAGACTTGTGGGGAGCACTTAGG-----AAGTTACTGGGAATGTCAT-AAAGGGTTAAtttg---------------tattttattttattttttgagac--a i panTro5.chr1 C 0 C 0 s panPan2.chr7 56720301 522 + 162613886 CATTGTCCAGGTCTTTACAGTGCTGGTTTCCCTGCCTGGGCAGCTCACTCCATCCCATCCCAGCCCATTCCCCAtccctccacctccc-gcttccctccccactctcatacaactcttcctcatctttcaggacccagcttcag-tgttaccttaactggaagcttctctcacccttcagAAGAGCTTCCCATTGCACTTGAGGCATGC--ACTATTATTTGATCATTTTTGAGTTATAGTCCAAGTCTTTTTGTACCTGAATAAGATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCTGAAGTCTTTCATGGTAGATTCAGCTGGAAGTGACAAAAAGACATTCTTTTGAAAAAGAGGGATGACACAGACAGACATAAGTTCTTAAACGGTTTAAATGATA----TGTGAAAATTTAACAAAATTCAAAGGCTTGTGGGGAATACTTAGGAGGAAAAGTTACTGGGAGTGTTAT-AAAGGGTTAATTTATATTTTATTGTACtttattttattttattttttgagtcaga i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4223520 499 + 4392246 CGTTGTTCAGGTCTGTACGGTGCTGGTTTCCCTTCCCGGGCAGTTTGCGCTATCCCATCCCGGCCCATTCCCCAtccctccacctccc-ccttccctccccactctcatacaactcttcctcatctttcaggacttggcttcaa-tgtcaccttaactggaagcttctctcactctccagAAGAGCTTCCCATTGCACTTGATGCATGC--ACTATTATTTGATCATTTTTAAGTTACAGTCCAAATCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCAGAAGTCCTTCATGGTAGATCCAGCTGGAAGTGACAAAAAGACA-TCTTTTGACATAAACGGATGACACAGACAGACATAAATTCTTAAATGTCTTAAATGTTA----TGTGAAAATTAAACAGAATTCAAAGACTTCTGGGGAACACTTAGG-----AAGTTACTGGGAATGTCAT-AAAGGGTTAAtttg---------------tattttattttattttttgagac--a i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46794145 495 - 99891981 CATTGTTCGGGTCTGTACAGTGAT-GTTTCCCTGCCTGGGCAGCTCACTccatcccatcccagcccattgcccatccctccacctccc-ccttccctccccACTCTCATACAACTCTTCCTCATCTTTCAGGACTTGGCTTCAA-TGTCATCTTAACTGGAAACTTCTCTCAGCCTCCAAAAGAGCTTCCCATTGCACTTGAAGCATGC--ACTATTATTTGATCATTTTTGAGTTATAGTCCAAGTCTTTTTGTACCTGAATAACATGTTACCCAGTCGGTCTCCTTTCCTGGATTCAGAAGTCTTTCATGGTAGATCCAGCTGGAAGTGACAAATACAT--TCTTTTGAAATAAAGGGATGACACAGACAGACCTAAGTTCTTAAACGTCTTAAATGGTA----TGTGAAAATTAAACAAAATTCAAAGACTTGT-GGGAACACTTAGAAGGA-AAGTTACTGGGAATGTCAT-AAAGGGTTAATTTG--------------------TGttttattttttgagac--a i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55098453 510 + 185818997 cattgtccaggtctgtacagtgctggtcttcctgcctgagcagctcacttcatcccATCCCAGCCCATTCTTCAtccctccacctccc-ccttccctccccactctcatacaactcttcctcatctttcaggacttggcttcaagggtcaccttaattggaagcttctctcactgtccagaagagcttcccactgcacttgatgcatgc--actattatttgatcattTTTGAGTTACAGTGCAAGTATTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGATCCTGCTGGAAGTGACAAAAAGACATTCTTTTGAAATAAAGGGATGACACAGATAGACGGAAGTT-TTAAACGTCTTAAATGGTATGCGTGTGAAAATTAAACAAAATTCAAAGACTTGTGGGGAACATTTAGGAGGGAAAGTTACTGGGAATGTCATAAAAGGGTTAATTTG---------------TATTTTAttttattttttgagac--a i rheMac8.chr3 C 0 I 23 s macFas5.chr3 127692585 510 - 192294377 CATTGTCCAGGTCTGTACAGTGCTGGTCTTCCTGCCTGAGCAGCTCACTTCATCCCATCCCAGCCCATTCTTCAtccctccacctccc-ccttccctccccactctcatacaactcttcctcatctttcaggacttggcttcaagggtcaccttaattggaagcttctctcactgtccagAAGAGCTTCCCACTGCACTTGATGCATGC--ACTATTATTTGATCATTTTTGAGTTACAGTGCAAGTATTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGATCCAGCTGGAAGTGACAAAAAGACATTCTTTTGAAATAAAGGGATGACACAGATAGACGGAAGTT-TTAAACGTCTTAAATGGTATGCGTGTGAAAATTAAACAAAATTCAAAGACTTGTGGGGAACATTTAGGAGGGAAAGTTACTGGGAATGTCATAAAAGGGttaatttg---------------tattttattttattttttgagac--a i macFas5.chr3 C 0 I 21 s macNem1.NW_012013022v1 8947862 497 - 10413719 CATTGTCCAGGTCTTTACAGTGTTGGTTTCCCTGCCTGGGCAGCTCCCTCCATCCCATCCCAGCCCATTCCCCAtccctccacctccc-ccttccctctccactctcatacaactcttcctcatctttcaggacccggcttcaa-tgtcaccttaattggaagcttctgtcaccctccagAAGAGCTTCCCATTGCACTTGATGCATGC--ACTGTTATTTGATCATTTCTGAGTCATAGTCCAAGTCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCTGAAGTCTTTCATGGTAGATCCGGCTAGAAGTGACAAAAAGACATTCTTTTGAAAAAGAGGGATGACACAGACAGACATAAGTTCTTAAATGTTTTAAATGGTA----CGTGAAATTTTAACAAAATTCAAAGGCTTGTGGGGAACACTTAGGAGGAAAAGTTACTAGGAATGTTAT-AAAGGGTTAATTTA---------------TATTTGATTGTACttt---------- i macNem1.NW_012013022v1 C 0 I 23 s cerAty1.NW_012005081v1 38069 506 - 113584 CATTGTTCAGGTCTGTACAGTGCTGGTTTCCCTGCCTGAGCAGCTCACTCCATCCAATTCCAGCCCATTCTTCAtccctccacctccg-ccttccctccccactctcatacaactcttcctcatctttcaggacttggcttcaagggtcaccttaactggaagcttctctcactgtccagAAGAGCTTCCCACTGCACTTGATGCATGC--ACTATCATTTGATCATTTTTGAGTTATAGTCCAAGTCTCTTTGTACGTGAATAACATGTTGCCCGGTCAGTCTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGATCCAGCTGGAAGTGACAAAAAGACAATCTTTTGAAATAAAGGGATGACACAGACAGATGTAAGTTCTTCAACGTCTTAAATGGTA----TGTGAAAATTAAACAAAATTCAAAGACTTGTGGGGAACACTTAGGAGGGAAAGTTACTGGGAATGTCAT-AAAGGGTTAATTTG---------------TATTTTAttttattttttgagac--a i cerAty1.NW_012005081v1 C 0 I 8 s chlSab2.chr21 124149393 511 - 127223203 CATTGTCCAGGTCTGTACAGTGCTGGTTTTCCTGACTGAGCAGCTCACTTcatcccatcccagcccattcttcatccctccacctcccCACTTCCCTCCCCACTCTCATACAACTCTTCCTCATCTTTCAGGACTTGGCTTCAAGGGTCACCTTAATTGGAAGCTTCTCTCACTGTCCAAAAGAGCTTCCCACTGCACTTGATGCATGC--ACTATTATTTGATCATTTCTGAGTTACAGTCCAAGTCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGATCCAGCTGGAAGTGACAAAAAGACATTCTTTTGAAATAAAGGGATGACACAGATAGACGGAAGTTCTTAAACGTCTTAAATGGTATGTGTGTGAAAATTAAACAAAATTCAAAGACTTGTGGGGAACACTTAGGAGGGAAAGTTACTGGGAATGTCAT-AAAGGGTTAATTTG---------------TATTTTATTTTACTTTTTGAGAC--A i chlSab2.chr21 C 0 I 25 s manLeu1.NW_012100344v1 41545 504 - 148006 CATTGTCCAGGTCTGTACAGTGCTGGTTTCCCTGCCTGAGCAGCTCACTTcatcccatcccagcccattcttcatccctccacctcccaccttccctccccactctcatACAACTCTTCCTCATCTTTCAGGACTTGGCTTCAAGGGTCACCTTAATTGGAAGCTTCTCTCACTGTCCAAAAGAGCTTCCCACTGCACTTGATGCATGG--AC---TATTTGATCATTTTTGAGTTACAGTCCAAGTCTTTTTGTACCTGAATAACAAGTTGCCCAGTCAGTCTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGATCCAGCTGGAAGTGACAAAAAGACATTCTTTTGAAATAAAGGGATGACACAGATAGACAGAAGTTCTTAAACGTCTTAAATGGTA----TGTGAAAATTAAACAAAATTCAAAGACTTGTGGGGAACATTTAGGAGGGAAAGTTACTGGGAATGTCAT-AAAGGGTTAATTTG---------------TATTTTAttttattttttgagac--a i manLeu1.NW_012100344v1 C 0 I 23 s colAng1.NW_012116633v1 751883 520 + 1536524 CATTGTCCAGGTCTTTACAGTGCTGGTTTCCCTGCCTGGGCAGCTCCCTCCATCCCATCCCAGCccattccccatccctccacctccc-ccttccctccccactctcatacaagtcttcctcatctttcaggacctggtttcaa-tatcaccttaactggaagcttctgtcaccctccagAAGAGCATCCCATTGTACTTGATGCATGC--ACTATTATTTGATCATTTCTGAGTCATGGTACAAGTCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTTTGAAGTCTTTCATGGTAGATCCAGTTGGAAGTGATAAAAAGACATTCTTTTGAAAAAGAGGGATGACACAGACAGACATAAATTCTTACATGTTTTAAATGGTA----TGTGAAAATTTAACAAAATTCAAAGGCTTGTGGGGAACACTTAGGAGGAAAAGTTACTAGGAATGTTAT-AAAGGGTTAATTTATATTTTATTGTACtttattttattttattttttgagac--a i colAng1.NW_012116633v1 C 0 I 2 e aotNan1.NW_018487315v1 6195652 8750 - 15679484 I e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C a score=-2057.000000 s hg38.chr3_KI270784v1_alt 23995 6 + 184404 gtctc-----------------a s panTro5.chr1 222307697 5 + 228573443 gtctc------------------ i panTro5.chr1 C 0 C 0 s panPan2.chr7 56720823 6 + 162613886 gtctc-----------------a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4224019 6 + 4392246 gtctc-----------------a i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46794640 23 - 99891981 ttctttttatttgattttttatt i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127693116 2 - 192294377 ----T-----------------T i macFas5.chr3 I 21 C 0 s macNem1.NW_012013022v1 8948382 6 - 10413719 gtctc-----------------a i macNem1.NW_012013022v1 I 23 C 0 s cerAty1.NW_012005081v1 38583 6 - 113584 atttc-----------------a i cerAty1.NW_012005081v1 I 8 I 9 s colAng1.NW_012116633v1 752405 6 + 1536524 gtctc-----------------a i colAng1.NW_012116633v1 I 2 C 0 e aotNan1.NW_018487315v1 6195652 8750 - 15679484 I e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e rheMac8.chr3 55098963 23 + 185818997 I e manLeu1.NW_012100344v1 42049 23 - 148006 I e chlSab2.chr21 124149904 25 - 127223203 I a score=10010.000000 s hg38.chr3_KI270784v1_alt 24001 2 + 184404 tt s panTro5.chr1 222307702 2 + 228573443 tt i panTro5.chr1 C 0 C 0 s panPan2.chr7 56720829 2 + 162613886 tt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4224025 2 + 4392246 tt i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46794663 2 - 99891981 tt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55098986 2 + 185818997 tt i rheMac8.chr3 I 23 C 0 s macFas5.chr3 127693118 2 - 192294377 Tt i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8948388 2 - 10413719 tt i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 38598 2 - 113584 tt i cerAty1.NW_012005081v1 I 9 C 0 s manLeu1.NW_012100344v1 42072 2 - 148006 tt i manLeu1.NW_012100344v1 I 23 C 0 s colAng1.NW_012116633v1 752411 2 + 1536524 tt i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6195652 8750 - 15679484 I e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e chlSab2.chr21 124149904 25 - 127223203 I a score=943228.000000 s hg38.chr3_KI270784v1_alt 24003 180 + 184404 ctgtcacctaggctggagtgcagtggtgcaatca-ggctcactgcagccttgaccacctgggctcaagtaatcTCACTTAATTTTTATTTGGTTTAAGAA----AGTCTTggttgagggtggtggcttatgcctgtaatctcagcactttgggaggctgagagaggtatattacttgaggccagg s panTro5.chr1 222307704 178 + 228573443 ctgtcacctaggctggagtt--gtggtgcaatca-agctcactgcagccttgaccacctgggctcaagtaatcTCACTTAAGTTTTATTTGGTTTAAGAA----AGTCTTggttgagggtggtggcttatgcctgtaatctcagcactttgggaggctgagagaggtatattacttgaggccagg i panTro5.chr1 C 0 C 0 s panPan2.chr7 56720831 185 + 162613886 ctgttacctaggctggagagcagtggtgtaatcagggctcactgcagcctcaaccacctgggctcgggtaatcTCACTTAATCTTTATTTGGTTTAAGAAACTCAGTCTTggttgagcatagtggcttatgcctacaatctcagcactttgggaggctgagagggatatattacttgaggcaagc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4224027 180 + 4392246 ctgtcacctaggctggagtgcagtggtgcaatca-ggctcactgcagccttgaccacctgggctcaagtaatcTCACTTAATTTTTATTTGGTTTAAGAA----AGTCTTggttgagggtggtggcttatgcctgtaatctcagcactttgggaggctgagagaggtatattacttgaggccagg i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46794665 183 - 99891981 ctgtcacctaggctggagtgcagtggtgcaatcagggctcactgcagcctcgaccccctgggctcaagtaatcTCACTTAATTTTTATTTGGTTTAAGAAAC--GGTCTTggttgagggtggtggcttatgcctgtaatctcagcactttgggaggctgagagaggtatgttacatgaggccagg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55098988 182 + 185818997 ctgtcacctaggctggagtgcagtggtgcaattagggctcgctgcagcctcgaccacctggtctcaagtcatcTCACTTAATTTTTATTTGGTTTAAGGAA-TAAGTCTTggttgagggtggtggcttacgcctgtaatctcagcactttgggaggccgaga--ggtatattacttgaggccagg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127693120 182 - 192294377 ctgtcacctaggctggagtgcagtggtgcaattagggctcgctgcagcctcgaccacctgggctcaagtaatcTCACTTAATTTTTATTTGGTTTAAGGAA-TAAGTCTTggttgagggtggtggcttacgcctgtaatctcagcactttgggaggccgaga--ggtatattacttgaggccagg i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8948390 185 - 10413719 ctgtcacctaggctggagtgcagtggtacaatcagggctcactgcagtctcaacctcctggtctcaagtagtcTCACTTAATCTTTATTTGGTTTAAGAAACTCAGTCTTggttgagcatggtggcttatgcctataatctcagcattttgggaggctgagaggggtatattacttgagtcaagc i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 38600 182 - 113584 ctgtcacctaggctggagagcagtggtgcaaccagggctcgctgcagcctcgaccacctgggctcaagtaatcTCACTTAATTTTTATTTGGTTTAAGAAA-TAAGTCTTggttgagggtggtggcttatgcctgtaatctcagcactttgggaggctgaga--ggtatattacttgaggccagg i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124149929 182 - 127223203 ctgtcacctaggctggagtgcagtggtgcaattagggcttgctgcagcctcgaccacctgggctcaagtaatcTCACTTAATTTTTATTTGGTTTAAGAAA-TAAGTCTTggttgagggtggtggcttatgcctgtaatctcagcactttgggaggccgaga--ggtatattacttgaggccagg i chlSab2.chr21 I 25 C 0 s manLeu1.NW_012100344v1 42074 182 - 148006 ctgacacctaggctggagtgcagtggtgcaaccagggctcgctgcagcctcgaccgcctgggctcaagtaatcTCACTTAATTTTTATTTGGTTtaagaaa-caagtcttggttgagggtggtggcttatggctgtaatctcagcactttgggaggccaaga--ggtatattacttgaggccagg i manLeu1.NW_012100344v1 C 0 M 1530 s colAng1.NW_012116633v1 752413 185 + 1536524 ctgtcacctaggctggagtgcagtggtacaatcagggctcacggcagtctcaacctcctggtctcaagtaatcTCACTTAATCTTTACTTGGTTTAAGAAACTCAGTCTTggttgagcatggtggcttatgcctataatcttagcattttaggaggctgagaggggtatattacttgagtcaagc i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6195652 8750 - 15679484 I e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C a score=2782581.000000 s hg38.chr3_KI270784v1_alt 24183 617 + 184404 agtttgagatcagactgggcaatatattaagaccctgcctctacc-aaaaaACAGAGTGAATGTgtggaagacaatttttccacagactgggaatg-agggaataatttcaggatgattcaagtgcattacatatattgtgcactttatttctattattactacatagtaatatataatgaaatgattctacaactcactataacgtagactcagtgggatctctgagcttgttttcctgcaactagactgtccatctggggtgatgggagacag--taacagaatatcaggca----ttagattctcataaggagtacacaacctagatccctcgcatgcacacttcacaacagagtttgtgctcctgtgagaatctaatgctgctgctgatctgacaggacatggagctcaggtggtcatgcaagcgatgggaggggctagaaatacagatgaagtttcccttcactcgcctgctgctcacctccagctctgtggccctgtGGTTGGAGACCGCTGCTCAAGTGCATTTGAAAGGAACCAACCCACGCCATTCTTCAGAGTCATCTTTACTGCTGCAGTGGTCAACTTGTAGCACCCCTAAGCTCGCAGGACATATGCTTCAA s panTro5.chr1 222307882 617 + 228573443 agtttgagatcagcctgggcaatatattaagaccctgcctctacc-aaaaaACAGAGTGAATGTgtgaaagacaatttttccacagactgggagtg-agggaataatttcaggatgattcaagtgcattacatatattgtgcactttatttctactattactacatagtaatatataatgaaatgattctacaactcactataacgtagactcagtgggatctctgagcttgttttcctgcaactagactgtccatctggggtgatgggagacag--taacagaatatcaggca----ttagattctcataaggagtacacaacctagatccctcgcatgcacacttcacaacagagtttgtgctcctatgagaatctaatgctgctgctgatctgacaggacatggagctcaggtggtcatgcaagcgatgggaggggctagaaatacagatgaagtttcccttcactcgcctgctgctcacctccagctctgtggccctgtGGTTGGAGACCGCTGCTCAAGTGCGTTTGAAAGGATCCATCCCATGCCATTCTTCAGAGTCATCTTTACTGCTGCAGTGGTCAACTTGTAGCACCCCTAAGCTCACAGGACATATGCTTCAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 56721016 618 + 162613886 agtttgagatcagcctgggcaacatattaagaccctgtctctaccaaaaaAACAGAGTGAAtttgtggaagacaacttttccacagactcgaggtgaaggaaatgattttgggatgattcaagtgcattacatatattgtgcactttatttctattattattacattgtaatatataatgaaataattatacaactcactataatgtagaatcagtgggatctctgagcttgttttcctgcatcaagactgttcaactggggtgacgggagacag--tgacagatcatcagcca----ttagattctcacaaggagcgtgcaatctagatccctcacatgcacagttcacaacagggttcgtgctcctatgagaatctaatgctgctgctgatctgacaggacatggtgctcaggtggtcatgggagcgatgggaggggctataaatacagatgaagtttcccctcactcgcccgctgctcacctccggctctatggacctgtGGTTGGAGACCCCTGCTTGAGTGCATTCAAAAGGATCCATCCCATGCCATTCTTCAGAGTCATCTTTACTGCTGCCGTGGTCAA-GTGTAGCACCCCTAAGCTCGCAGGGCATATGCTTCAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4224207 617 + 4392246 agtttgagatcagcctgggcaatatattaagaccctgcctctacc-aaaaaACAGAGTGAATGTgtggaagacaatttttccacagactgggagtg-agggaataatttcaggatgattcaagtgcattacatatattgtgcactttatttctattattactacatagtaatatataatgaaatgattctacaactcactataacgtagactcagtgggatctctgagcttgttttcctgcaactagactgtccatctggggtgatgggagacag--taacagaatatcaggca----ttagattctcataaggagtacacaacctagatccctcacatgcacacttcacaacagagtttgtgctcctatgagaatctaatgctgctgctgatctgacaggacatggagctcaggtggtcatgcaagcgatgggaggggctagaaatacagatgaagtttcccttcactcgcctgctgctcacctccagctctgtggccctgtGGTTGGAGACCGCTGCTCAAGTGCATTTGAAAGGATCCATCCCACGCCATTCTTCAGAGTCATCTTTACTGCTGCAGTGGTCAACTTGTAGCACCCCTAAGCTCGCAGGACATATGCTTCAA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46794848 615 - 99891981 agtttgagatcagtctgggcaatatattaagaccttgtctctacc-aaaaaACAGAGTGAATGTgtggaagacaatttttccacagactgggagtggagggaataatttcaggatgattcaagtgcattacatatattgtgcactttatttccattattattacatcgtaatatataatgaaataattctataactcactataatgtagaatcagtgggatctctgagcttgttttcctgcaactagactgtccatctggggtgatgggagacag--tgacagaacatcaggca----ttagattatcataaggagcgcacaacctagatccctagcgtgcacacttcacaacagggttcgtgctcctgtgagaatctaatgctgctgctgatctgacaggacatggagctcaagtggtcatgcaagtgatgggaggggctagaaatactgatgaagtttcccttcacttgcctgctgctcacctccggctctgtggccctgtGGTTGGAGACTGCTGCTCAAGTGCATTCGAAAGGATCCATCCCATGCCATTCTTC--AGTCATCTTTACTGCTGCAGTGGTCAA-CTCTAGCACCCCTAAGCTTGCAGGGCATATGCTTCAA i nomLeu3.chr17 C 0 I 291 s rheMac8.chr3 55099170 617 + 185818997 aatttgagatcagcctgagcaatatattaagaccctgtctctacc-aaaaaACAGAGTGAATGTgtggaagacaatttttccacagactgggagtggagggaataatttcaggatgattcaaatgcattacatatactgtgcactttatttctattattactacattgtaatatataatgaaataattctacaactcactataatgtagactcagtgggatctctgagcttgttttcctgcaacgacactgtccatctagggtgatgggagatag--tgatagaacatcaggca----ttggattctcataaggagtgcacaacctagatccctcgcatgcacgcttcacaacagggttcgtgcttctatgagaatcgaatgctgctgctcatctgacaggacatggagctcaggtggtcatacaagcgataggaggggctggaaatacagatgaagtttcccctcactcgcctgctgctcacctccggttctatggcccTTTGGTTGGAGACCGCTGCTCAAGTGCATTCGAAAGGATCCATCCCATGCCATTCTTCAGAGTCATCTTTACTGTGGCAGTGGTCAA-CTGTAGCACCCCTAAGCTCGCAGGGCATACGCTTCAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127693302 617 - 192294377 aatttgagatcagcctgagcaatatattaagaccctgtctctacc-aaaaaACAGAGTGAATGTgtggaagacaatttttccacagactgggagtggagggaataatttcaggatgattcaaatgcattacatatactgtgcactttatttctattattactacattgtaagatataatgaaataattctacaacttactataatgtagactcagtgggatctctgagcttgttttcctgcaacgacactgtccatctagggtgatgggagatag--tgatagaacatcaggca----ttggattctcataaggagtgcacaacctagatccctcgcatgcacgcttcacaacagggttcgtgcttctatgagaatcgaatgctgctgctcatctgacaggacatggagctcaggtggtcatacaagcgataggaggggctagaaatacagatgaagtttcccctcactcgcctgctgctcacctccggttctatggcccTTTGGTTGGAGACCGCTGCTCAAGTGCATTCGAAAGGATCCATCCCATGCCATTCTTCAGAGTCATCTTTACTGTGGCAGTGGTCAA-CTGTAGCACCCCTAAGCTCGCAGGGCATACGCTTCAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8948575 618 - 10413719 agtttgagatcagcctgggcaacatattaagaccctgtctctaccaaaaaaacaaaGCGAAtttatggaaggcaatttttccacagactgggggtggagggaattatttcaggatgattcaagtgtattacatatattgtgcactttatttctattattattacattgtaatatataatgaaataattatacaactcactataacatagaatcagtggcatctctgagcttgttttcctgcatcaagactgtccatgtgtggtgacgggagacag--tgacagatcatcagcca----ttagattctcataaagagtgtgcaacctagatccctcacatgcaaagttcacaacagggttcgtgcttctatgagaatctaatgctcctactgatctgacaggacatggagctcaggtggtcatgtgagtgatgggaggggctataaatacagatgtagtttcccctcactcacttgctgctcacctctggctctgtagccctgtGGTTGGAGACCCCTGCTTGAGTGCATTCAAAGGGATCCATCCCATGCCATTCTTCAGAGTCATCTTTACTGCCATCATGGTCAA-ATGTAGCACCCCTAAGCTCACACGGCATATGCCTCAG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 38782 617 - 113584 actttgagatcagcctgggcaatatattaagaccctgtctctaac-aaaaaacaGAGTGAATGTgtggaagacaatttttccacagactgggagtggagggaataatttcaggatgattcaaatgcattacatatactgtgcactttatttctattattactacattgtaatatataatgaaataattctacaactcactataatgtagactcagtgggatctctgagcttgttttcctgcaatgacactgtccatctagggtgatgggagacag--tgatagaacatcaggca----ttagattctcataaggagtgcacaacctagatccctcgcatgcacacttcacaacagggttcgtgcttctatgagaatcaaatgctgctgctcatctgacaggacatggagctcaggtggtcatacaagcgataggaggggctagaaatacagatgaagtttcccctcactcgcctgctgctcacctctggttctatggcccTTTGGTTGGAGACCGCTGCTCAAGTGCATTCGAAAGGATCCATCCCATGCCATTCTTCAGAGTCATCTTTACTGTGGCAGTGGTCAA-CTGTAGCACCCCTAAGCTCGCAGGGCATATACTTCAC i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124150111 619 - 127223203 aatttgagatcagcctgagcaatatattaagaccctgtctctacc-aaaaaACAGAGTGAATGTgtggaagacaatttttccacagactgggagtggagggaataatttcaggatgattcaaatgcattacatatactgtgccctttatttctattattactacattgtaatatataatgaaataattctacaactcactataatgtagactcagtgggatctctgagcttagtttcctgcaacgacactgtccatctagggtgatgggagacagcctgatagaacatcaggca----ttagattctcataaggagtgcacaacctagattcctcacatgcacgcttcacaacagggttcgtgcttctatgagaatcgaatgctgctgctcatctgacaggacatggagctcaggtggtcatacaagcgataggaggggctagaaatacagatgaagtttcccctcacttgcctgctgctcacctccggttctatggccctgtGGTTGGAGACCACTGCTCAAGTGCATTCGAAAGGATCCATCCCATGCCATTCTTCAGAGTCATCTTTACTGCGGCAGTGGTCAA-CTGTAGCACCCCTAAGCTTGCAGGGCAAATGCTTCAC i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 752598 622 + 1536524 agtttgagatcagcctgggcaatatattaagaccctgtctctaccaaaaaaacagaGTGAAtttgtggaagacaatttttacacagactgggggtggagggaatgatttcaggatgattcaagtgtattacatatattgtgcacattatttctattattattacattataatatataatgaaataattatacaactcactataacatagaatcagtggcatctctgagcttgttttcctgcatcaaggctgtccaagtggggtgacgggagacag--tgacagatcatcagccattctttagattctcataaagagcgtgcaacctagatccctcacatgcacagttcacaacagggttcgtgcttctatgagaatcgaatgctgctgctcatctgacaggacatggagctcaggtggtcatgtgagtgataggaggggctataaatacagatgaagtttcccctcactcgcctgctgctcacctctggctctgtggccctgtAGTTGGAGACCCCTGCTTGAGTGCATTCAAAGGGATCCATCCCATGCCATTCTTCAGAGTCATATTTACTGCGGCAGTGGTCAA-CTGTAGCACCCCTAAGCTCACACGGCATATGCCTCAG i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6195652 8750 - 15679484 I e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e manLeu1.NW_012100344v1 42256 1530 - 148006 M a score=24694.000000 s hg38.chr3_KI270784v1_alt 24800 8 + 184404 CTGGCATT--- s panTro5.chr1 222308499 8 + 228573443 CTGGCATT--- i panTro5.chr1 C 0 C 0 s panPan2.chr7 56721634 11 + 162613886 CTAGCATTTCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4224824 8 + 4392246 CTGGCATT--- i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46795754 11 - 99891981 CTGGTATTTCA i nomLeu3.chr17 I 291 C 0 s rheMac8.chr3 55099787 11 + 185818997 CTGGCATTTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127693919 11 - 192294377 CTGGCATTTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8949193 11 - 10413719 GTGGCAATTTC i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 39399 11 - 113584 CGGGCATTTCA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124150730 11 - 127223203 CTGGCCTTTCA i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 753220 11 + 1536524 CTGGCATTTCA i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6195652 8750 - 15679484 I e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e manLeu1.NW_012100344v1 42256 1530 - 148006 M a score=833570.000000 s hg38.chr3_KI270784v1_alt 24808 156 + 184404 TCACA-ATCAACAGTATGTGGCAGCTTGAGTCATTGTGAGCTCACATCCTGGAAATCACCAGCATCCCATATCCCATT-GCAAGGAGCTCAGCACTGCTCCTTGGATAACCAAACCTATTCCCAAATCCCATCTGTGTGCGTCTATCTCCTGGTACCC s panTro5.chr1 222308507 157 + 228573443 TCACA-ATCAACAGTATGTGGCAGCTTGAGTCATTGTGAGCTCACTTCCTGGAAATCACCAGCATCCCATATCCCATTAGCAAGGAGCTCAGCACTGCTCCTTGGATAACCAAACCTATTCCCAAATCCCATCTATGTGCGTCTATCTCCTGGTACCC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56721645 157 + 162613886 TCACA-ATCAACAATAAGTGGCAGCTTGAGTCATTGTGAGGTCAGTTCCTGGAAATCACCAGCATCCCGTGTCCCATTGGCAAGGAGCTCAGCTCTGCTCCTTGGATAACCAAACCTGTGCCCAAATCCCATCTGTGTGTGTCTATCTCCTGGTACCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4224832 157 + 4392246 TCACA-ATCAACAGTATGTGGCAGCTTGAGTCATTGTGAGCTCACTTCCTGGAAATCACCAGCATCCCATATCCCATTAGCAAGGAGCTCAGCACTGCTCCTTGGATAACCAAACCTATTCCCAAATCCCATCTGTGTGCGTCTATCTCCTGGTACCC i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46795765 157 - 99891981 TCACA-ATCAACAGTAAGTGGTAGCTTGAGTCATTGTGAGGTCACTTCCTGGAAATCACCAGCATCCCATATCCCATTAGCAAGGAGCTCAGCACTGCTCCTTGGATGACCAAACCTATTCCCAAATCCCATCTGTGTGGGTCTATCTCCTAGTACCC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55099798 157 + 185818997 CCACA-ATCAACAGTAAGTGGTAGCTTGAGTCATTGTGAGGTCACTTCCTGGAAATCACCAGCATCCTATATCCCATTAGGAAGGAGTTCAGCACTGTTCCATGGATAACCAAACCTATTCCCAAATCCTATCTGTGTGGGTCTATCTCCTGGTACCC i rheMac8.chr3 C 0 I 3224 s macFas5.chr3 127693930 157 - 192294377 CCACA-ATCAACAGTAAGTGGTAGCTTGAGTCATTGTGAGGTCACTTCCTGGAAATCACCAGCATCCTATATCCCATTAGGAAGGAGTTCAGCACTGTTCCATGGATAACCAAACCTATTCCCAAATCCTATCTGTGTGGGTCTATCTCCTGGTACCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8949204 158 - 10413719 ACACATATCAACAGTAAGTGGTAGCTTGAGTCATTGTGAGGTCAGTTCCTGGAAATCACCAGCATCCCATGTCCCACTGGCAAGGAGCTCAGCACTGCTCCGTGGATAACCAAACCCATGCCCAAATCCCATCTGTGTGGGTCTATCTCCTGGTATCT i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 39410 157 - 113584 CCACA-ATCAACAGTAAGTGGTAGCTTGAGTTATTGTGAGGTCACTTCCTGGAAATCACCAGCATCCTATATCCCATTAGGAAGGAGTTCAGCACTGTTCCTTGGATAACCAAACCTATTCCCAAATCCTATCTGTGTGGGTCTATCTCCTGGTACCC i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124150741 157 - 127223203 CCACA-ATCAACAGTAAGTGGTAGCTTGAGTCATTGTGAGGTCACTTCCTGGAAATCACCAGCATCCTATATCCAATTAGGAAGCAGTTCAGCACTGCTCCTTGGATAACCAAGCCTATTCCCAAATCCTATCCATGTGGGTCTATCTCCTGGTACCC i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 753231 157 + 1536524 TCACA-ATCAACAGTAAGTGGTAGCTTGAGTCATTGTGAGGTCAGTTCCTGGAAATCACCAGCATCCCATGTCCCACTGGCAAGGAGCTCAGCACTGCTCCTGGGATAACCAAACCCATGCCCAAATCCCATCTGTGTGGGTCTATCTCCTGGTATCC i colAng1.NW_012116633v1 C 0 C 0 s aotNan1.NW_018487315v1 6204402 157 - 15679484 TCACA-ATGAACAGTAACTGGAAGCTTGAAACATTATGAGGTCCCTTCCTAAAAATCACCTGCATCCCATTTCCCATTGGCAAGGACCTCGACGCTGCCCCTTGGATAACCAAACCTATGCCCAAATCCCATCTGTGTGGGTCTATCTCCTGGGACCC i aotNan1.NW_018487315v1 I 8750 C 0 e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e manLeu1.NW_012100344v1 42256 1530 - 148006 M a score=174690.000000 s hg38.chr3_KI270784v1_alt 24964 35 + 184404 TTCCTAGCATCAATTCtgtatttgtaggagtccaa s panTro5.chr1 222308664 35 + 228573443 TTCCTAGCATCAATTCtgtatttgtaggagtccaa i panTro5.chr1 C 0 C 0 s panPan2.chr7 56721802 35 + 162613886 TTCCTAGCATCAATTCtgtatttgtaggagtccaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4224989 35 + 4392246 TTCCTAGCATCAATTCtgtatttgtaggagtccaa i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46795922 35 - 99891981 TTCCTACCATCAATTCtgtatttgtaggagtccaa i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127694087 35 - 192294377 TTCCTAGCATCAATTCtgtatttgtaggagtccaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8949362 35 - 10413719 TTCCTAGCATCAATTCtgtatttgtaggagtccaa i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 39567 35 - 113584 TTCCTAGCATCAATTCTGTATTTGTAGGAGTCTAA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124150898 35 - 127223203 TTCCTAGCATCAATTCtgtatttgtaggagtccaa i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 753388 35 + 1536524 TTCCTAGCATCAATTCtgtatttgtaggagtccaa i colAng1.NW_012116633v1 C 0 C 0 s aotNan1.NW_018487315v1 6204559 35 - 15679484 TTCCTAGCATCAATTCtgtatttgtcagagtccaa i aotNan1.NW_018487315v1 C 0 T 9268 e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e rheMac8.chr3 55099955 3224 + 185818997 I e manLeu1.NW_012100344v1 42256 1530 - 148006 M a score=2182462.000000 s hg38.chr3_KI270784v1_alt 24999 661 + 184404 tcaggagacacaaaccactcaaaagtttaaactagaatgagcaagatggctcacacctgtaatcccagaactctgggaggccaaggtgggtggactgctttgagctcaggagtttgagaac---------------agtctggg--------------------------aaacatggcgaaacctcgtctctacaaaaaacacaaaaatcagctgggtgtggtggcacttacctgtaatcccagctactcgggaggctgaggcaggagaattgcttgagcctggcaggtggaggctgcagtgagcagaggttgtgccactgtactccagcctgggtgacagtgtgagacccggtatcaaaa---agaaaaa-aCGtatatata-tatatat------atatatatatatatatatgtaaatttaatataaaaagtatt-aattttggccaggca---aaatggctcatgcctgtaatcccagcactttgggaggccaaggcagacagatcacctgaggtcaggagttcgagaccagcctgaccagcacagagaaaccccatctctactaaaaatacaaaattagctgggcatggtggcacatgcctgtaatcccaactactcgggaggctgaggcaggagaattgcttgaacccagaaggtggaggttgcgctgagccgagatagcgccattgcac--------------tccagcctgggcaacaagag s panTro5.chr1 222308699 643 + 228573443 tcaggagacacaaaccactcaaaagtttaaactagaatgagcaagatggctcacacctgtaatcccagcactctgggaggccaaggcgggtggactgctttgagctcaggagtttgagaac---------------agtctggg--------------------------aaacatggcgaaacctcgtctctacaaaaaacacaaaaatcagctgggtgtggtggcacttacctgtaatcccagctactcgggaggctgaggcaggagaattgcttgagcctggcaggtggaggctgcagtgagcagaggttgtgccactgtactccagcctgggtgacagtgtgagacccggtatcaaaa---agaaaaa-acgtatatata-tatatat------------------------gtaaatttaacataaaaagtatt-aattttggccaggca---aaatggctcatgcctgtaatcccagcactttgggaggccaaggcagacagatcacctgaggtcaggagttcgagaccagcctgaccagcatagagaaaccccatctctactaaaaatacaaaattagctgggcatggtggcacatgcctgtaatcccaactactcgggaggctgaggcaggagaatcgcttgaacccggcaggtggaggttgcgctgagccgagatagcgccattgcac--------------tccagcctgggcaacaagag i panTro5.chr1 C 0 C 0 s panPan2.chr7 56721837 639 + 162613886 tcaggagatataaaccattcaaaagtttaaactagaatgggcaaggtggctcaaacctgtaattctagcactttgggaggccaaggcgggtggattgctttgagctcaggagtttgagacc---------------agcctggg--------------------------aagtagggtgaaaccccatctctacaaaaaacacaaaaattagccgggtgtggtggtacatacctgtaatcccagctactcgggagtctgaggc---agaattgcttgagcctggtaagtgaaggttgaagtgagcagagattgtgccactgcactccagcctgggtgacagagtgaaagccagtatcaaaa---aataaaa---gtaagaata-tatatat------------------------gtaattttaatataaaaagtattaaattttggctgggcg---cggtgactcacgcctgtaatcccaggactttgggaggctgaagcaggcagatcacctgaggtcgggagtttgagaccagcttgaccaacatggagaaacaccgcctctactaaaaatacaaaattagctgggcgtggtggcacatacctgtgatttcagctacttgggaggctgaggcagaagaatcgcttgaaactgggaggcggaggttgcagtgagccgagatcacaccattgccc--------------tccagcttgggcaacaagag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4225024 644 + 4392246 tcaggagacacaaaccactcaaaagtttaaactagaatgagcaagatggctcacacctgtaatcccagcactctgggaggccaaggtgggtggactgctttgagctcaggagtttgagaac---------------agtctggg--------------------------aaacacggcgaaacctcgtctctacaaaaaacacaaaaatcagctgggtgtggtggcacttacctgtaatcccagctactcgggaggctgaggcaggagaattgcttgagcctggcaggtggaggctgcagtgagcagaggttgtgccactgtactccagcctgggtgacagtgtgagacctggtatcaaaa---agaaaaa-acgtatatatattatatat------------------------gtaaatttaatataaaaagtatt-aattttggccaggca---aaatggctcatgcctgtaatcccagcactttgggaggccaaggcagacagatcacctgaggtcaggagttcgagaccagcctgaccagcatagagaaaccccatctctactaaaaatacaaaattagctgggcatggtggcacatgcctgtaatcccaactactcgggaggctgaggcaggagaatcgcttgaacccggcaggtggaggttgcgctgagccgagatagcgccattgcac--------------tccagcctgggcagcaagag i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46795957 682 - 99891981 tcaggagacacaaaccactcagaagtttaaacTAGAATGAGCAAggtggctcacacctataatcccagcacttcgggaggccaaggtgggtggattgctttgagctcaggagtttgagacc---------------agtctggg--------------------------aaacatggcgaaaccccatctctacaaaaaacacaaaaattagctcggtgtggcggcatttacctgtaatcccagctactcgggaggctaagtcaggagaattgcttgagcctggcaggtggaggctgcagtgagcagaggttgtgccactgtactccagcctgagtgacagcatgagacctggtatcaaaa---agaaatatatatatatata-tatatatacacacacacacacacacatatatGTaaatttaatatagaaagcatt-aattttggccaggca---caatggctcatgcctgtaatcccagcactttgggaggccaaggcaggcggatcacctgaggtcaggagttccagaccagcctgaccaacatggagaaaccctgtctctactaaaaatacaaaattagctgggcatggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccggcaggcggaggttgcggtgagccgagatagcgccactgcactccagcctgggcaatccagcctgggcaacaagag i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127694122 633 - 192294377 tcaggagacacaaacaactcaaaagtttaaactggaatgagcaaggtggatcacacctgtaatctcagcactttggaaggccaaggtgggtggattgccttgagcttaggagtttgagacc---------------agtctggg--------------------------aaatatggtgaaatcccatctctacaaaaaacacaaaaattagct--acgtggtgggacttacctgtaatcccagcaacgtgggaggctgaggcaggagaattgcttgagcttggcaggtggaggctgcgatgagcagaggttgtgccactgcactccagcctgggtgacagcgtgagacccggtatcaaaa---agaaaaa--------aata-catatat------------------------gtcaatttaatat-aaaagtatt-gattttggccaggcg---aaatggctcatgcctgtaatcccagcactttgggaggccaaggcaggcagatcacctgaggtcaggagttcgagaccagcctgaccaacgcggagaaaccccgtctctaccaaaaatacaaaattagctgggcatggtggcacatggctgtcatcccagttactcaggaggctgaggcaggagaatcacttgaacccggcaggcggagattgcggtgagtcgagatagcgccattgcac--------------tccagcctgggcaacaagag i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8949397 638 - 10413719 tcaggagacataaaccactcaaaagtttaaactagaatgggcacggtggctcaaacttgtaatcctagcactttgggaggccaaggtgggtggatcgctttgagcttaggagtttgagacc---------------aaactggg--------------------------aaacaggacgaaactctgtctctacaaaaaacacaaaaattaggcgggtgtggtggtacatacctgtaatcccagctacttgggaggctgaggcagaagaattgctttagcctggcaagtgaaggttgaagtgagcagagattgtgccactgcactccagcctgggcgacagagtaaaatccggtatcaaaaaataaaagaa--------aaaa-tatgtat------------------------gtaaatttaatataaaaagtatt-aaattttgGCTGGCGGCCAggcggctcacgcctataatcccacgactttgggaggccgaggcaggcagatcacctgaggtcaggagttagaga----cttgaccaacatggagaaaccccgtctctacgaaaaatacaaaattagctgggtgtggtggagcatgcctgtgattccagctacttgggaggctgaggcaggagaattgcttgaacctcggaggcggaggttgcggtgagccgagattgtgccatcgcac--------------tccagcctgggcaacaagag i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 39602 635 - 113584 TCAGGAGACACAATCAACTCAAAAGTTTAAACTAGAATGAGCAAAgtggatcacacctgtaatctcagcaccttgggaggccaaggtgggtgggttg-tttgagctcaggagtttgagaac---------------agtctggg--------------------------aaacatggcgaaaccccatctctacaaaaaacacaaaaattagctcagtgtggtggcacttacctgtaattccagctacgtgggaggctgagacaggagaattgcttgagcttggcaggtggaggctgcagtgagcagaggttgtgccactgcactccagcctgggtgacagcgtgagacccagtatcaaaa---agaaaaa--------aaTA-CATATAT------------------------GTaaatttaatataaaaagtatt-aattttggccaggcg---caatggttcatgcctgtaatcccagcactttgggaggccaagacaggtggatcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatataaaattagctgggcatggtggcacacacctataatcccagctactcgggaggctgaggcaggagaatcgcttgaacctggcaggcagaggttgcggtgagctgagacagcgccattgcac--------------tccagcatgggcaacaagag i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124150933 675 - 127223203 tcaggagactcaaacaactcaaaagtttaaactggaatgagcaaggtggatcacacctgtaatctcagcactttctgaggccaaggtgggtggattgccttgagctcaggagtttgagacctgagaaatatggcgaaatctgggaaatatggcgaaatcccatctctacaaaatatggcgaaatcccatctctacaaaaaacacaaaaattagct--atgtggtggcacttacctgtaatcccagcaacgtgggaggctgaggcaggagaattgcttgagcttggcaggtggaggctgcgatgagcagaggttgtgccactgcactccagcctgggtgacagcgtgagacccggtatcaaaa---agaaaaa--------aata-catatat------------------------gtaaatttaatataaaaagtatt-aattttggccaggtg---aaatggctcatgcctataatcccagcactttgggaggccaagacaggcggatcacctgaggtcaggagttcgagaccagcctgaccaacgtggagaaaccccctctctaccaaaagtacaaaattagctgggcatggtggcacatggctgtcatcccagttactcaggaggctgaggcaggagaatcacttgaacccggcaggcggaggttgcggtgagtcgagatagcgccattgcac--------------tccagcttgggcaacaagag i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 753423 634 + 1536524 tcaggagacataaaccactcaagagtttaaactagaatgggcatggtggttcaaacctgtaatcctagcactttgggaggccaaggcgggtggatcgctttgagctcaggagtttgagacc---------------aaactggg--------------------------aaacaggacgaaaccccgtctctacaaaaaacacaaaaattaggtgggtgtggtggtacatacctgtaatcccagctacttgggaggctgaggcagaagaattgctttagcctggcaagtgaaggttgaagtgagcagagattgtgccactggactccagcttgggcgacagagtaaaatccagtatcaaaaaataaaagaa--------aaaa-tatatat------------------------gtaaatttaatataaaaagtattaaattTTggctgggcg---cagtggctcacgcctataatcccacaactttcagaggccaaggcaggtagatcacctgaggtcaggag--agaga----cttgaccaacatggagaaaccccgtctctactaaaaatacaaaattagctgggtgtggtggagcatgcctgtgattccagctacttgggaggctgaggcaggagaattgcttgaacctcggaggcggaggttgtggtgagctgagattgtgccattgcac--------------tccagcctgggcaacaagag i colAng1.NW_012116633v1 C 0 M 6838 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e rheMac8.chr3 55099955 3224 + 185818997 I e manLeu1.NW_012100344v1 42256 1530 - 148006 M a score=25454.000000 s hg38.chr3_KI270784v1_alt 25660 15 + 184404 tgaaactccatctc-----------a s panTro5.chr1 222309342 15 + 228573443 tgaaactccatctc-----------a i panTro5.chr1 C 0 C 0 s panPan2.chr7 56722476 15 + 162613886 tgaaactccatctg-----------a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4225668 15 + 4392246 tgaaactccatctc-----------a i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46796639 15 - 99891981 tgaaactccatctc-----------a i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127694755 14 - 192294377 tgaaactccatctc------------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8950035 24 - 10413719 caaaactgcatctcaaaaaaaaaa-- i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 40237 14 - 113584 tgaaactccatctc------------ i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124151608 15 - 127223203 tgaaactccatctc----------a- i chlSab2.chr21 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 754057 6838 + 1536524 M e rheMac8.chr3 55099955 3224 + 185818997 I e manLeu1.NW_012100344v1 42256 1530 - 148006 M a score=2271058.000000 s hg38.chr3_KI270784v1_alt 25675 663 + 184404 aaaaaaaaaaaa-----ggtattaatttttacagaggatcagcacaatgagggacacactagcacaaagtaaagacaactctagagaatacggaactagcagaggccaggcattgtggctcatgcctgtaatcccagcaatttgggaagcctaggcaggaggatcgcttgaggccaggagttggagaccaatcagtgctaaatagtgagactctgtgtctacc--aaaaaaa---agagacattagccaggtgtggtggtggtgcacacccgtagttccagctacttgggagtctggggtgggagaaatcccttgagcctgggaagtctacactacagtgagccaagattgtgccactgcactccagcctgggc-gacagagtgagaccctgtctt----agaaaga----a----aaaagaaaagaaaGTGTTAATCCCCCTATGGGAATCTCCTCTTCTCCTGCCCTCTCTGGAACCTCACTTGTCAGTTCTTCCTCCCACTTTCCTGTATCTTTAACCTATCCCCCACTTTTAGCTCCTTCCCATCATCATTTAAATTACTCAAACTTCTTCTGTTTT-----AAAAACCTCTCCCTAAACTCAGGG-----------AG-----------AGGTCTTCTGCACACACATTGAGCCATCTGCTCTTCCCGGTGCCTTCTCT--ACAGCAGCCTGAGCCATGTCTCTAATCTA s panTro5.chr1 222309357 668 + 228573443 aaaaaaaaaaaaaaaaaggtattaatttttacagaggatcagcacaatgagggacacactagcacaaagtaaagacaactctagagaatacggaactagcagaggccaggcattgtggctcatgcctgtaatcccagcaatttgggaagcctaggcaggaggatcgcttgaggccaggagttggagaccaatcagtgctaaatagtgagactctgtgtctacc--aaaaaaa---agagacattagccaggtgtggtggtggtgcacacccgtagttccagctacttgggagtctggggtgggagaaatcccttgagcctgggaagtctacactacagtgagccaagattgtgccactgcactccagcctgggc-gacagagtgagaccctgtctt----agaaaga----a----aaaagaaaagaaaGTGTTAATCCCCCTATGGGAATCTCCTCTTCTCCTGCCCTCTCTGGAACCTCACTTGTCAGTTCTTCCTCCCACTTTCCTGTATCTTTAACCTATCCCCCACTTTTAGCTCCTTCCCATCATCATTTAAATTACTCAAACTTCTTCTGTTTT-----AAAAACCTCTCCCTAAACTCAGGG-----------AG-----------AGGTCTCCTGCACACCCATTGAGCCATCTGCTCTCCCTGGTGCCTTCTCT--ACAGCAGCCTGAGCCATGTCTCTAATCCA i panTro5.chr1 C 0 C 0 s panPan2.chr7 56722491 661 + 162613886 aaaaaaaaaaaa---------ttaattttaatagaggatcagcataatgagggacacaacagcacaaagtaaagacgactcgagagaatacagaactagcagaggccaggcatggtggctcaagcctgtaatctcagcaatttgggaagactaggcaggaggatcgctcaaggcctggagttggagaccagcctgcacaacatagtgagaccctgtgtctacc--aaaaaaa--gaaaaaagttagccaggtgtggtggcggttcacacctgttgttccagctactt-ggagtctggggtgggag-gaccccttgagcctgggaagtctaggctacaatgagccaagatcatgccattgcact----cctggga-gat--agtgagaccctgtctt----agaaaga----aaaagaaaagaaaagaaaGTGCTGATCCCCCTA------------CTTCTCCCGCCCTCTCTGGAACCTCACTTGTCAGTTCTTCCTCCCACTTCCCTGTATCATT-ACCTATCCCCCCCTTTTAGCTCCTTCTCACCATCATTTAAACTAATCAAACTTCTTATATTTTAAAAAAAAAACCTCTCCCTAAACTCAGTGTTTCCCCTACTTT-----------AGGTCTCCAGCACACCCACGGAGCCATCTGCTTTCCCTGGTGCCTTCTCTACACAGCAGCCTGGGCCACGTCTCTAATCCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4225683 664 + 4392246 aaaaaaaaaaaa----aaagattaatttttacagaggatcagcacaatgagggacacactagcacaaagtaaagacaactctagagaatacggaactagcagaggccaggcattgtggctcatgcctgtaatcccagcaatttgggaagcctaggcaggaggatcgcttgaggccaggagttggagaccaatcagtgctaaatagtgagactctgtgtctacc--aaaaaaa---agagacattagccaggtgtggtggtggtgcacacccgtagttccagctacttgggagtctgggatgggagaaatcccttgagcctgggaagtctacactacagtgagccaagattgtgccactgcactccagcctgggc-gacagagtgagaccctgtctt----agaaaga----a----aaaagaaaagaaaGTGTTAATCCCCCTATGGGAATCTCCTCTTCTCCTGCCCTCTCTGGAACCTCACTTGTCAGTTCTTCCTCCCACTTTCCTGTATCTTTAACCTATCCCCCACTTTTAGCTCCTTCCCATCATCATTTAAATTACTCAAACTTCTTCTGTTTT-----AAAAACCTCTCCCTAAACTCAGGG-----------AG-----------AGGTCTCCTGCACACCCATTGAGCCATCTGCTCTCCCTGGTGCCTTCTCT--ATAGCAGCCTGAGCCATGTCTCTAATCCA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46796654 642 - 99891981 aaaaaaaaaaag------gtattaattttagcagaggatcagcataacgagggacacactagcacaaagtaaagacaactctagagaatacagaactagcagaggccaggcactgtggctcatgcctgtaatcccagcaatttgggaagcctaggcaggaggatcacttgaggccaggagttggagacctgtcagcgcaacatagtgagactatctgtctacc--aaaaaaaagaaaaaatattagccaggtgtggtggtggtgcacacctgtaattccagctacttgggagtctgggg--------------------tgggaagtctacactacagtgagccaagatcatgccactgcattccagcctgggc-gacagagtgagaccctgtctt----agaaaga---------aaaagaaaagaaaGTATTAATCCCCCTAAGGGAATCTCCTCTTCTCCTGCCCTCTCTGGAACCTCATTTGTCAGTTCTTTCTCCCACTTCCCTGTATCTTTAACCTATCCCCCACTTTCAGCACCTTCCCACCATCATTTAAATTACTCAAACTTCTTCTATTTT-----AAAAACCTCTCCCTAAACTCAGTG------------------------AGGTCTCCTGCACACCCACTGAGCCATCTGCTCCCCCTGGTGCCttctct--acagaagcctgagccacgtctctaatcca i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127694769 660 - 192294377 aaaagaaaaaaa-----ggtattaattttaacagaggatcagcataatgagggacacactagcacgaagtaaagacatctctagagaatacagaactagcagaggtcaggcattatggctcatgcctgtaatcccagcaatttcggaagcctagacagcaggatcgcttgaggccaggagttggagaccagtcagagcaacatagtgagacgctgtgtctacccaaaaaaaa--gaacaatattagccaggtgtggtggtggtgtacacctgtagttccagctacttgggagtctggggtgggag-gatcccttgagcctgggaagtctacactacagtgagccaagatcatgccactgaactccagcctaggt-gacagagtaagaccctgtctt----ag---------a----aaaagaaaagaaaGTATTAATCCCCCTATGGGAatctcctcttctcctgccctctcaggaacctcacttgtcagttcttcctcccactttcctgtatctttaacctatcccccacttttagctccttcccaccatcatttaaattactcaaacttcttctatttt-----aaaaaCCTCTTCCTAAACTCAGTG-----------AG-----------AGGTCTCCTGCACACCCACTGAGCCATCTGCTCCTCCTGGTGCCTTCGCT--ATAGCAGCCTGAACCATGTCTCTAATCCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8950059 669 - 10413719 aaaaaaaaaaaa-----GGtattaattttaacagaggatcagcataatgagggacactctagcacaaagtaaacaca----aagtaaatatagaactagcagaggccaggcatagtggctcaagcctgtaatcccagcaatttgggaagcctaggcaagaggatcgcttgaggccaggagttggagaccagcctgtgcaacatagtgagaccctgtgtctacc--aaaaaaa--gaaaaaaattagccaggtgtggtcgtggtgcacacctgtagttccagctactt-ggagtctggggtgggag-gaccccttgagcctgggaagtctaggctacagtgagccaagatcatgccattgcact----cctgggc-aat--agtgagaccctgcctt----agaaagaaaaaa----aaaagaaaagaaaGTGCTAATCCCCCTACGGGAATCTCCTCTTCTCCTGCCTTCTCTGGAACCTCACTTGTCAGTTCTTCCTCCCACTTCCCCGTATCATTAACCTATCCCCCGCTTTTAGCTCCTTCCCACCATCACTTAAACTAATCAAACTTCTTATATTTT-----AAAAAACTTTCCCTAAACTCACTG-----------TTTCCCCTGCTTCAGGTCTCCAGTACACCCACTGAGCCATCTGCTTTCCCTGATGCCttctctacacagcagcctggaccacatctctaatcca i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 40251 640 - 113584 aaaagaaaaaaa-----ggtattaattttaacagaggatcagcataatgagggacacactagcataaaataaagacaactttagagaatacagaactagtagaGGTTGCGCATTgtggatcatgcctttaatcccagcaatttgggaagcctaggcaggaggatcgctggaggccaggagttggagaccagtcagcgcaacatagtgagacactgtgtctact--gaaaaaa--gaaaaatattagccaggtgtggtggtggtgcatacctgtagttccagctacttgggagtctggggtgggag-gatcccttgagcctgggaagtctacactacagtgagccaagatcatgccactgcactccagcctgggtggacagagtgagaccctgtctc----ag---------a----aaaagaaaagaaaGTGTTAATCCCCCTATGGGAATCTCCTCTTCTCCTGCCCTCTCAAGAACCTCACTTGTCAGTTCTTCCTCCCACTTTCCTGTATCTTTAACCTATCCCC-------------------CCATCATTTAAATTTCTCAAACTTCTTCTATTTT-----AAAAACCTCTCCCTAAACTCAGTG-----------AG-----------AGGTCTCCTGCACACCCACTGAGCCATCTGTTCCCCCTGGTGCCTTCTCT--ACAGCAGCCTGAGCCATGTCTCTAATCCA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124151623 659 - 127223203 -aaagaaaaaaa-----ggtattaattttaacagaggatcagcataatgagggacacactagcacaaagtaaagacatctctagagaatacagaactagcagaggtcaggcattatggctcatgcctgtaatcccaacaattttggaagcctaggcagcaggatcgcttgaggccaggagttggagaccagtcagagcaacatagtgagacgctgtgtctaccaaaaaaaaa--gaacaatattagccaggtgtggtggtggtgcacacctgtagttccagctacttgggagtctggggtaggag-gatcccttgagcctaggaagtctacactacagtgagccaagatcatgccactgaactccagcctaggt-gacagagtaagaccctgtctt----ag---------a----aaaagaaaagaaaGTGTTAATCCCCCTATGGGAatctcctctcctcctgccctctcaggaaactcacttgtcagttcttcctcccactttcctgtatctttaacctatcccccacttttagctccttcccaccatcatttaaattactcaaacttctgctatttt-----aaaaaCCTCTTCCTAAACTCAGTG-----------AG-----------AGGTCTCCTGCACACCCACTGAGCCATCTGCTCCCCCTGGTGCCTTCGCT--ATAGCAGCCTGAGCCATGTCTCTAATCCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 43792 664 - 148006 AAAAGAAaaaaa-----ggtattaattttaacagaggatcagcataatgagggacaaactagcacaaagtaaagacatctctagagaatacagaactagcagaggtcaggcattatggctcatgcctgtaatcccagcaatttcggaagcctaggcagcaggattgcttgaggccaggagttggagaccagtcagagcaacatagtgagatgctgtgtctaccaaaaaaaaa--gaaacatattagccaggtgtggcggtggtgcacacctgtagttccagctacttgggagtctggggtgggag-gatcccttgagcctgggaagtccacactacagtgagccaagatcatgccactgaactccagcctaggt-gacagagtaagactctgtcttagaaag---------a----aaaagaaaagaaaGTGTTAATCCCCCTATGGGAatctcctcttctcctgccctctcaggaacctcacttgtcagttcttcctcccactttcctgtatctttaacctatcccccacttttagctccttcccaccatcatttaaattactcaaacttcttctatttt-----aaaaacctcttcctaaactcagtg-----------ag-----------aggtctcctgcacacccactgagccatctgctccccttggtgccttctct--atagcagcctgagccatgtctctaatcca i manLeu1.NW_012100344v1 M 1530 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 754057 6838 + 1536524 M e rheMac8.chr3 55099955 3224 + 185818997 I a score=207420.000000 s hg38.chr3_KI270784v1_alt 26338 44 + 184404 TGAATCTCATCATGTTA---C---TCCCCCATTTACATCACTTCTCCTTG s panTro5.chr1 222310025 44 + 228573443 TGAATCTCATCATGTTA---C---TCCCCCATTTACATCACTTCTCCTTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56723152 47 + 162613886 TGAATCTCATCACATTACTCC---TCCCCCATTTACATCACTTCTCCTTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4226347 44 + 4392246 TGAATCTCATCATGTTA---C---TCCCCCATTTACATCACTTCTCCTTG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46797296 44 - 99891981 tgaatctcatcatgtta---c---tcccccatttacatcacttctccttg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55103179 44 + 185818997 TGAATCTCATCACGTTA---C---TCCCCCATTTACATCACTTCTCCTTG i rheMac8.chr3 I 3224 C 0 s macFas5.chr3 127695429 44 - 192294377 TGAATCTCATCACGTTA---C---TCCCCCATTTACATCACTTCTCCTTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8950728 47 - 10413719 tgaatctcattatgtta---ctcttcccccatttacatcactcctccttg i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 40891 44 - 113584 TGAATCTCATCACGTTA---C---TCCCCCATTTACATCAGTTGTCCTTG i cerAty1.NW_012005081v1 C 0 I 211 s chlSab2.chr21 124152282 44 - 127223203 TGAATCTCATCACGTTA---C---TCCCCCATTTACATCACTTCTCCTTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 44456 44 - 148006 tgaatctcatcatgtta---c---tcccccatttacatcacttctccttg i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 754057 6838 + 1536524 M a score=31134.000000 s hg38.chr3_KI270784v1_alt 26382 10 + 184404 CCTCAGGGAT s panTro5.chr1 222310069 10 + 228573443 CCTCAGGGAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 56723199 10 + 162613886 CCTTGGGTAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4226391 10 + 4392246 CCTCAGGGAT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46797340 10 - 99891981 cttcggggat i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55103223 10 + 185818997 CCTCCGGGAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127695473 10 - 192294377 CCTCCGGGAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8950775 10 - 10413719 cctcagggat i macNem1.NW_012013022v1 C 0 C 0 s chlSab2.chr21 124152326 10 - 127223203 CCTCTGGGAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 44500 10 - 148006 cctgggggat i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 40935 211 - 113584 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 754057 6838 + 1536524 M a score=2352019.000000 s hg38.chr3_KI270784v1_alt 26392 542 + 184404 TAAGTCCAAACTCCTTAACAgcccctgctctgccctgccttgcaaggcagcctcactg--cttgcccctctccatttcatctgctatggagtccaactgagcctcatctgccccttgaacgcacactctttctcctctgggagtctctgaagtgggtaatatcctctgcttataatatgcttccccttaaacctctactctcttcctagctagctttgactcctctgtcacttgtccgctttggcatcacctcctcatagaag--------------------------------------------------------------------------------------acttctatgactcccgagATTCTCAGGAGCATGGCAGGTGAAGTGctcctcccatgaatggatggagattagggagtgtgtgttattcatgcttaattcaccagtgcttagctgagtacctggcataaaatagttactGTGGTGGCCAAAGTAATAAC------CCCCACCGCC---ACCAATTGCTCATGTCCtatgttacacagcacagttacagaggaagggggaattaagagtgcagataaaattaatgttgctcatcagctgaccttaaaacaagattatcctgg s panTro5.chr1 222310079 542 + 228573443 TAAGTCCAAACTCCTTAACAGCCCCTGCTCTGCCCTGCCTTGCAAGGCAgcctcactg--cttgcccctctccatttcatctgctatggagtccaactgagcctcatctgccccttgaacgcacactctttctcctctgggagtctctgaagtgggtaacatcctctgcttataatatgcttccccttaaacctctactctcttcctagctagctttgactcctctgtcacttgtccgctttggcatcacctcctcatagaag--------------------------------------------------------------------------------------acttctatgactcccgagATTCTCAGGAGCATGGCAGGTGAAGTGctcctcccatgaatgaatggagattagggagtgtgtgttattcatgcttaattcaccagtgcttagctgagtacctggcataaaatagTTACTGTGGTGGCCAAAGTAATAAC------CCCCACCGCC---ACCAATTGCTCATGTCCTATGTTACACAGCACAAttacataggaagggggaattaagagtgcagataaaattaatggtgctcatcagctgaccttaaaacaagattatcctgg i panTro5.chr1 C 0 C 0 s panPan2.chr7 56723209 528 + 162613886 TAAGTCCAAA-----------CCCCTGCTCTGTCCTGCCTTGCAAGGCAgcctcactg--cttgcccctctccattttacctgctgtagagtccaactgagcctcacctgcaccttgaatgcccactctctctcctctgggagcctctgaagtgggtgatgccctctgcttagaatatgcttccccttaaatctctactctcttcctggctagctttggctcctctgtcacttgtctgctttggcatcatctcctcctggaag--------------------------------------------------------------------------------------ccttccttgactccccagATTCTCAGGAGCATGGGAGGTGAGGTGctcctcccatatacgaatggagattagggaatatgtgttattcatgtttaattcaccagtgcttagctcagtgcctggcacaaaacagtcactGTGGTGGCCAAGGTAATGAC------CCCCA---CC---CCCAATTGCTCATGTCCTATGTTACACCACACAAttacataggaagggggaattaagagtgcagatggaattaatgttgctaatcaggtgactttaaaacaagattatcctgg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4226401 541 + 4392246 TAAGTCCAAACTCCTTAACAGCCCCTGCTCTGCCCTGCCTTGCAAGGCAgcctcactg--cttgcccctctccatttcatctgctatggagtccaactgagcctcatctgccccttgaacacacactctttctcctctgggagtctctgaagtgggtaatatcctctgcttataatatgcttccccttaaacctctactctcttcctagctagcttcgactcctctgtcacttgtccgctttggcatcacctcctcatagaag--------------------------------------------------------------------------------------acttctttgactcccgagATTCTCAGGAGCATGGCAGGTGAAGTGctcctcccatgaatggatggagattagggagtgtgtgttattcatgcttaattcaccagtgcttagctgagtacctggcataaaatagTTACTGTGGTGGCCAAAGTAATAAC------CCCCACCACC---ACCAATTGCTCATGTCCTATGTTACACAGCACAAttacataggaa-ggggaattaagagtgcagataaaattaatgttgctcatcagctgaccttaaaacaagattatcctgg i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46797350 543 - 99891981 taagtccaaactccttaacagcccctgctctgccctgccgtgcaaggcagcctcactg--cttgcccctctccatttcacctgctatggagtccaactgagcctcatctgccccctgaatgcacactc--tctcctctgggagtctctgaagtgggtgatatcctctgcttataatacgcttccccttaaacctctactctcttcctggctagcttcggctcctctgtcacttgtccgctttggcatcacctcctcatggaag--------------------------------------------------------------------------------------acttccttgactccccaGATTCTCAGGAGCATGGCAGGTGAGGTGcttctcccatgaatggatgaagattagggagtgtgtgttattcatgcttaattcaccagtgcttagctcagtacctggcacaaaacagttactGTGGTGGCCAAAGTAATAAC------CCCCCCCTCCCCAACTAATTGCTCATGTCCTATGTTACACAGCACAAttatataggaagggggaattaagagtgcagataaaattaacgttgctcatcagctgaccttaaaacaagatcatcctgg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55103233 521 + 185818997 TAAGTCCAGACTCCTTAACAgcccctgctctgccctgccttgcaaggcagcctcactg--cttgcccctctccatttcacctactatggagtccagctgagcctcatcttt--------------------ctcctctgggactctctgaagtgggtgatgccctctgcttataatacgcttccccttaaacctctactctcttcctggctagcttcagctcctctgtcacttgtccgctttggcatcacctcctcacggaag--------------------------------------------------------------------------------------acttccttgactccccagATTCTCAGGAGCAT-GCAGGTGAGGTGCTCCTCCCGTGAATGGATGgagattagggagagtgtgttattcatgcttaattcaccagtgcttagctcagtacctagcacaaaacagttactGTGGTAGCCAAAGTAATAAC------CCCCACCCCC---ACCAATTGTTCATGTCCTATGTTACACAGCACAAttgcataggaagggggaattaagagtacagataaaattaatgttgaaaatcagctgaccttaaaacaagattatcctgg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127695483 522 - 192294377 TAAGTCCAGACTCCTTAACAGCCCCTGCTCTGCCCTGCCTTGCAAGGCAGCCTCACTG--CTTGCCCCTCTCCATTTCACCTACTATGGAGTCCAGCTGAGCCTCAtcttt--------------------ctcctctgggactctctgaagtgggtgatgccctctgcttataatacgcttccccttaaacctctactctcttcctggctagcttcagctcctctgtcacttgtccgctttggcatcacctcctcacggaag--------------------------------------------------------------------------------------acttccttgactccccaGATTCTCAGGAGCATGGCAGGTGAGGTGCTCCTCCCATGAATGGATGGAGATTAGGGAGAGTGTGTTATTCATGCTTAATTCACCAGTGCTTAGCTCAGTACCTAGCACAAAACAGTTACTGTGGTAGCCAAAGTAATAAC------CCCCACCCCC---ACCAATTGTTCATGTCCTATGTTACACAGCACAAttgcataggaagggggaattaagagtacagataaaattaatgttgaaaatcagctgaccttaaaacaagattatcctgg i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8950785 635 - 10413719 taagtccaaactccttaacagcccctgctctgccctgcattccaaggcagactcactgctcttgcccctctccattttacctgctgtggagtccaactgagcctcatctgccccctgaatgcccactctcactcctctgggaggctctgaagtgggtgatgccctctgcttagaatatgcttccccttaaacctctactctcttcctgggtagcttcggctcctctgtcacttctctgctttggcatcatctcctcctggaagccttccttgactccccagATTCTCAGGAGTATGGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCCTTGACTCCCCAGATTCTCAGGAGTATGGGAGGTGAGGTGctcctcccatatatgaatggagattagggagtatgtgttattcatgtttaattcaccagtgcttagctcagtacctggcacaaaatagtcactGTGGTGGCCAAGGTAACGACAGCCCTCCCACCCCCC---AGCAATAGCTCATGTCCTATGTTACACTGCACAAAtacataggaa-ggggaattaagagtgcagatggaattaatgttgctaatcagctgaccttaaaacaagattatctggc i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 41146 528 - 113584 TAAGTCCAAACTCCTTAACAgcccctgctctgccctgccttgcaaggcagccttactc--------------catttcacctgctatggagtccaactgagcctcatctgtcccctgaatgcactcttt--ctcctctgggagtctctgaagtgggtgatgccctctgcttataatacgcttccccttaaacctctactctcttcctggctagcttcggcttctctgtcacttgtctgctttggcatcacctcctcacagaag--------------------------------------------------------------------------------------acttccttgactcccaagattCTCAGGAGCATGGCAGGTGAGGTGctcctcccatgaatggatggagattagggagagtgtgttattcatgcttaattcaccagtgcttagctcagtacctagcacaaaacagttactGTGGTAGCCAAAGTAATAAC------CCCCACCCCC---ACCAATTGCTCATGTCCTATGTTACACAGCACAAttacataggaagggggaattaagagtgcagataaaattaatgttgctaatcagctgaccttaaaacaagattatcctgg i cerAty1.NW_012005081v1 I 211 C 0 s chlSab2.chr21 124152336 522 - 127223203 TAAGTCCAAACTCCTTAACAGCCCCTGCTCTGCCCTGCCTTGCAAGGCAGCCTCACTG--CTTGCCCCTCTCCATTTCACCTGCTATGGAGTCCAACTGAGCCTCAt------------------cttt--cccctctgggagtctctgaagtgggtgataccctctgcttataatacgcttccccttaaacctctactctcttcctggctagcttcggctcctctgtcacttgtccactttggcatcccctcctcacagaag--------------------------------------------------------------------------------------acttccttgactccccaGATTCTCAGAAGCATGGCAGGTGAGGTGCTCCTCCCATGAATGCATGGAGATTAGGGAGAGTGTGTTATTCATGCTTAATTCACCAGTGCTTAGCTCAGTACCTAGCATAAAACAGTTACTGTGGTAGCCAAAGTAATAAC------CCCCACCCCC---ACCAATTGTTCATGTCCTATGTTACACAGCACAAttacataggaagggggaattaagagtgcagataaaattaatgttgaaaatcagctgaccttaaaacaagattatcctgg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 44510 540 - 148006 taagtctaaactccttaacagcccctgctctgccctgacttgcaaggcagcctcactg--cttgaccctctccatttcacctcctatggagtccaactgagcctcatctgtcccctgaatgcacacttt--ctcctctgggagtctctgaagtgggtgataccctctgcttataatacgcttccccttaaacctcaactctcttcctggctagcttcggctcctctgtcacttgtccgctttggcatcacctcctcacggaag--------------------------------------------------------------------------------------acttccttgactccccaGATTCTCAGGAGCATGACAGGTGAGGTGctcctcccatgaatggatggagattagggagagtgtgttattcatgcttaattcaccagtgcttagctcagtacctagcacaaaacagttactGTGGTAGCCAAAGTAATAAC------CCCCACCCCT---ACCAATTGCTCATGTCCTATGTTACACAGCACAAttgcataggaagggggaattaagagtgcagataaaattaatgttgaaaatcagctgaccataaaacaagattatcctgg i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 754057 6838 + 1536524 M a score=2684071.000000 s hg38.chr3_KI270784v1_alt 26934 506 + 184404 agtatctaggagagcccatgtaattacaagcattctttaaaactggaagagggaggcagaaggttaagaaccagagacggTgggcacaatggctcatgcctgtaataccaatactttgggaggccagggtaggaaaatcccttgagtgcaggagttcaaggtcagccatggcaacata-ctgaggtcccatctctacaacaaaataaaaa----------caaaattcactgagtgtcacgatgcttacctgtagtcccagctactgggaaggctgacatggtaggattgcttgagcctgggagtttgaggctataatgagccatgataggaccactgaactccatcctgagtgacagggcaaggtcctgtttctgaagaaaaaaaGGACATTGGAATCAGGGCCCTCTCCATCCTGAGGTGCCTACAAGGCATCTC-TCTCTGCAAACGAGTAAACATCACCCTCCAACTCCTTACAGAGTGGAGCAACA-GGAAAACTCCTTCACCTCATTTCTGTG s panTro5.chr1 222310621 504 + 228573443 agtatctaggagagcccaggtaattacaagcattctttaaaactggaagagggaggcagaaggttaagaaccagagaaagTgggcacaatggctcatgcctgtaataccaatactttgggaggccagggtaggaaaatcccttgagtgc---agttcaaggtcagccgtggcaacata-ctgaggtcccatctctacaacaaaataaaaa----------caaaattcactgagtgtcacgatgcttacctgtagtcccagctactgggaaggctgacatggtaggattgcttgagcttgggagtttgaggctataatgagccatgataggaccactgaactccatcctgagtgacagggcaaggtcctgtttctgaagaaaaaaaGGACATTGGAATCAGGGTCCTCTCCATCCTGAGGTGCCTACAAGGCACCTC-TCTCTGCAAATGAGTAAACATCACCCTCCAACTCCTTACAGAGTGGAGCAACAGGGAAAACTCCTTCACCTCATTTCTGTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56723737 517 + 162613886 agtatctgggtgagcccatgtaattacaagtgttctttaaatgtggaagagggaggcagaaggttaagaaccagagaTAGTgggcacaatggctcatgcctgtattaccaatactttgggaggccaaggcaggaaaatcccttgagtccaggagttcaaggtcagccctggcaacata-gcaaggccccatctctacaaaaaaaaaaaaaccaaaaaacccagaattccccgagtgtcatggcacttacctatagtcccagctactgggagggatgaggtgggaggatcgcctgagcctgggagtttgaggctacaatgagccattataggaccactgaactccatcctgagtgacacagcaaggtcctgtttctaaagaaaaaaaGGACATTGGAATCAGGGTCCCCTCCATCCTAAGGTACCTACAAGGCATCTCGTCTCTGCAAACAAGTAAACATCATCCTCCAACTCCTCACAGAGTGGAGCAGCA-GGAAAACTCCCTCACTTCATTTCTGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4226942 505 + 4392246 agtatctaggagagcccatgtaattacaagcattctttaaaactggaagagggaggcagaaggttaagaaccagagacggTgggcacaatggctcatgcctgtaataccaatactttgggaggccagggcaggaaaatcccttgagtgcaggagttcaaggtcagccgtggcaacata-ctgaggtcccatctctacaacaaaataaaaa----------caaaattcactgagtgtcacgatgcttacctgtagtcccagctac-gggaaggctgacatggtaggattgcttgagcctgggagtttgaggctataatgagccatgataggagcactgaactccatcctgagtgacagggcaaggtcctgtttctgaagaaaaaaaGGACATTGGAATCAGGGTCCTCTCCATCCTGAGGTGCCTACAAGGCATCTC-TCTCTGCAAACGAGTAAACATCACCCTCCAACTCCTTACAGAGTGGAGCAACA-GGAAAACTCCTTCACCTCATTTCTGTG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46797893 496 - 99891981 agtatctaggagagcccatgtaattacaagcattctttaaaagtggaagagggaggcagaaggttaagaaccagagaCAGTgggcacaatggctcatgcctgtaataccaatactttgggaggccaaggcaggaaaatcccttgagtgcagcagttcaagttcag-cgtggcaacata-gtgcggccccaactctacaaaaaaataaaaa----------caaaattcactgagtgtcatggtgctta---------ccagctattgggaaggctgacgtggtaggattgcttgagcctgggagtttgaggctacaatgagccatgattggaccactgaactccatcctgagtgacagggcaaggtcctgtttctaaagaaaaaaaGGACATTGGAATTAGGGTCCCCTCCATCGTAAGGTAGCTACAAGGCATCTC-TCTCTGCAAATGAGTAAACATCATCCTCCAACTCCTCACAGAGTGGAGCAGCA-GGAAAACTCCCTCACCTCATTTCTGTG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55103754 499 + 185818997 aatatctagaagagtccatgtaattacaagcattctttaaaagtggaagagggaggcagaaggttaagaaccagagaCAGTgggcacaatggctcatgcctgtaataccaatactttgggaggccaaggcaggaaaatcccttgagtgcaggagttcaaggtcagctctggcaacacacttgaggccccatctctacaaaaaaatcacaa----------caagattcactgagtgtcatggtgctcacctgtggtcccagctactgggaaggctgatgtggcaggattgctt--------gagtttgaggctacagtgagccgtgattggaccactgaactccatcctgagtgacaaggcaaggtcctgtttctaaagaaaaaaaCGACATTGGAATCAGGGTCCCCTCCATCCTAAGGTGCCTACAAGGCATCTC-TCTCTGCAAACGAGTAAACATCATCTTCCAACTCCTCACAGAGTGGAGGAGCA-GGAAAACTCCCTCACCTCATTTCTGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127696005 499 - 192294377 aatatctagaagagtccatgtaattacaagcattctttaaaagtggaagagggaggcagaaggttaagaaccagagatagtgggcacaatggctcatgcctgtaataccaatactttgggaggccaaggcaggaaaatcccttgagtgcaggagttcaaggtcagctctggcaacacacttgaggccccatctctacaaaaaaatcacaa----------caagattcactgagtgtcatggtgctcacctgtggtcccagctactgggaaggctgatgtggcaggattgctt--------gagtttgaggctacagtgagccgtgattggaccactgaactccatcctgagtgacaaggcaaggtcctgtttctaaagaaaaaaacgacattggaatcagggtcCCCTCCATCCTAAGGTGCCTACAAGGCATCTC-TCTCTGCAAACGAGTAAACATCATCTTCCAACTCCTCACAGAGTGGAGGAGCA-GGAAAACTCCCTCACCTCATTTCTGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8951420 502 - 10413719 agtatctgggtgagcccatgtaattacaagtgttccttaaatgtggaaaagggaggcagaaggttaagaaccagagaTAGTgggcacaatggctcatgcctgtattaccaatactttgggaggccaagacaggaaaatcccttgagtccaggagttcaaggccagtcctgacaacata-gtgaggcctcatctctacaaaaaaccc--------------caaaattccccaagtgtcatggtgcttagctgtagtcccagctactgggaaggatgaagtgggagggtcacttgagactgggagtttgaggctacaatgagccatgataggacaactgaactccatcctgagtgacagagcaaggtcctgcttctaaagaaaaaaaGGACATTGGAATTAGGGTCCCCTCCATCCTAAGGTGCCTACAAGGCATCTC-TCTCTGCAAATGAGTCAACGTCATCCTCCAACTCCTCACAGAGTGGAGCAGCA-GGAAAACTCCCTCACCTCATTTCTGTG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 41674 506 - 113584 agtatctaggagagcccatgtaattacaagcattctttaaaagtggaagagggaggcagaaggttaagaaccagagaCAGTgggcacaatggctcatgcctgtaataccaatactttgggaggccaaggcaggaaaatctcttgagtgcaggagttcaaggtcagctctggcaacata-gtgaggccccatctctacaaaaaaatcaaaa----------caaaattcactgagtgtcatggtgctcacctgtggtcccagctactgggaaggctgatgtggtaggactgcttgagcctcggagtttgaggctacagtgagccgtgattggaccactgaactccatcctgaatgacagggcaaggtcctgtttctaaataaaaaaacaaCATTGGGATCAGGGTCCCCTCCATCCCAAGGTGCCTACAAGGCATCTC-TCTCTGCAAATGAGTCAACATCATCCTCCAACTCCTCACAGAGTGGAGCAGCA-GGAAAACTCCCTCACCTCATTTCTGTG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124152858 498 - 127223203 aatatctagaagagcccatgtaattacaagcattctttaaaagtggaagagggaggcagaaggttaagaaccagagacagtgggcacaatggctcatgcctgtaataccaatacttcgggaggccaacgcaggaaaatcccgtgagtgcaggagttcaaggtcagccctggcaacacagttgaggccccatctctacaaaaaaatcaaaa----------caaaattcactgagtgtcacggtgctcacctgtggtcccagctactgggaaggctgatgtggcaggattgctt--------gagtttgaggctacagtgagccgtgattggaccactgaactccatcctaagtgacaaggcaaggtcctgtttctaaag-aaaaaacgacattggaatcagggtcCCCTCCATCGTAAAGTGCCTACAAGGCATCTC-TCTCTGCAAACGAGTAAACATCATCTTCCAACTCCTCACAGAGTGGAGGAGCA-GGAAAACTCCCTCACCTCATTTCTGTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 45050 507 - 148006 aatatctagaagagcccatgtaattacaagcattctttaaaagtggaagagggaggcagaaggttaagaaccagagacggTgggcacaatggctcatgcctgtaataccaatactttgggaggccaaggcaggaaaatcccttgagtgcaggagttcaaggtcagccctggcaacacagttgaggccccatctctacaaaaaaatcaaaa----------caaaattcactgagtgtcatggtgctcacctgtagtcccagctactgggaaggctgatgtggtaggattgcttgatcctgggagtttgaggctacagtgagccatgattggaccactgaactccatcctgagtgacagggcaaggtcctgtttctaaagaaaaaaaCGACATTGGAATCAGGGTCCCCTCCATCCTAAGGTGCCTACAAGGTATCTC-TCTCTGCAAACGAGTAAACATCATCCTCCAACTCCTCACAGAGTGGAGCAGTA-GGAAAACTCCCTCAACTCATTTCTGTG i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 760905 502 + 1536524 AGtatctgggtgagcccatgtaattacaagtgttccttaaatgtggaaaagggaggcagaaggttaagaaccagagaTAGTgggcacaatggctcatgcctgtactaccaatactttgggaggccaagataggaaaatcccttgagtccaggagttcaaggccagccctgacaacata-gtgaggcctcatctctacaaaaaaccc--------------caaaattccccaagtgtcatggtgcttacctgtagtcccagctactgggaaggatgaggtgggaggatcacttaagcctgggagtttgaggctacaatgagccatgataggacaactgaactccatcctgagtgacagagcaaggtcctgcttctaaagaaaaaaaGGACATTGGAATCAGAGTCCCCTCCATCCTAAGGTGCCTACAAGGCATCTC-TCTCTGCAAACGAGTAAACATCATCCTCCAACTCCTCACAGAGTGGAGCAGCA-GGAAAACTCCCTCACCTCATTTCTGTG i colAng1.NW_012116633v1 M 6838 I 3278 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C a score=336762.000000 s hg38.chr3_KI270784v1_alt 27440 74 + 184404 CTGCTTGGGAGGCCTGGACAGCCCAATAACCAGCTCCTCGCTGATGAAGCAATCAGGAAATGGCTCGAGTTGAG s panTro5.chr1 222311125 74 + 228573443 CTGCTTGGGAGGCCTGGACAGCCCAATAACCAGCTCCTTGCTGATGAAGCAATCAGGAAATGGCTCCAGTTGAG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56724254 74 + 162613886 CTGCTTGGGAGGCCTGGACAGCCCAATAACCAGCTGCTTGCTGATGAAGCAATCGGGAAATGGCTCGAGTTGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4227447 74 + 4392246 CTGCTTGGGAGGCCTGGACAGCCCAATAACCAGCTCCTTGCTGATGAAGCAATCAGGAAATGGCTCGAGTTGAG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46798389 74 - 99891981 CTGCGTGGGAGGCCTGGACAGCCCAATAACCAGCACCTTGCTGATGAAGCAATTATGAAATGGCTTGAGTTGAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55104253 74 + 185818997 CCACTTGGGAGGTCTGGACAGCCCAATAACCAGCTCCTTGCTGATGATGCAATCAGGAAATGGCTCGAGTTGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127696504 74 - 192294377 CCACTTGGGAGGTCTGGACAGCCCAATAACCAGCTCCTTGCTGATGATGCAATCAGGAAATGGCTCGAGTTGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8951922 73 - 10413719 TGGCTTGGGAGGCCT-GACAGCCCAATAACCAGCTCCTTGCTGATGAAGCAATTGGGAAATGGCTCGAGTTGAG i macNem1.NW_012013022v1 C 0 I 3103 s cerAty1.NW_012005081v1 42180 74 - 113584 TCACTTGGGAGGCCTGGACAGCCCAATAACCAGCTCGTTGCTGATGAAGCAAACAGAAAATGGCTAGAGTTGAG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124153356 74 - 127223203 CCACTTGGAAGGTCTGGACAGCCCAATAACCAGCTCCTTGCTGATGATGCAATCAGGAAATGGCTCGAGTTGAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 45557 74 - 148006 CCACTTGGGAGGTCTGGACAGCCCAATAACCAGCTCCTTGCTGATGATGCAATCAGGAAATGGCTCGAGTTGAG i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 761407 3278 + 1536524 I a score=133660.000000 s hg38.chr3_KI270784v1_alt 27514 34 + 184404 CTAAGGAGAATTTGGATCCTTCCTTTGGTTCTCA s panTro5.chr1 222311199 34 + 228573443 CTAAGGAGAATTTGGATCCTTCTTTTGGTTCTCA i panTro5.chr1 C 0 C 0 s panPan2.chr7 56724328 34 + 162613886 CTAAGGAGAATTTGGATCATTCTTTTGGTTCTCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4227521 34 + 4392246 CTAAGGAGAATTTGGGTCCTTCTTTTGGTTCTCA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46798463 33 - 99891981 CTAA-GAGAATTTGGATCCTTCCTTTGGTTCTCA i nomLeu3.chr17 C 0 M 271 s rheMac8.chr3 55104327 34 + 185818997 CTAAGGAGAATTTGGATCCTTCTTTTGGTTCTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127696578 34 - 192294377 CTAAGGAGAATTTGGATCCTTCTTTTGGTTCTCA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 42254 34 - 113584 CTAGGGAGAATTTGGATCCTTCTTTTGGTTCTCA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124153430 34 - 127223203 CTAAGGAGAATTTGGATCCTTCTTTTGGTTCTCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 45631 34 - 148006 CTAAGGAGAATTTGGATCCTTCTTTTGGTTCTCA i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 761407 3278 + 1536524 I e macNem1.NW_012013022v1 8951995 3103 - 10413719 I a score=51363.000000 s hg38.chr3_KI270784v1_alt 27548 17 + 184404 GTAGGCAGGGTAGGggc s panTro5.chr1 222311233 17 + 228573443 GTAGGCAGGATAGGggc i panTro5.chr1 C 0 C 0 s panPan2.chr7 56724362 17 + 162613886 ATAGGCAGGGTAGGggc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4227555 17 + 4392246 GTAGGCAGGGTAGGggc i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55104361 17 + 185818997 ACAGGCAGGGTAGGggc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127696612 17 - 192294377 ACAGGCAGGGTAGGggc i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 42288 17 - 113584 ATAGGCAGGGTAGGGGC i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124153464 17 - 127223203 ACAGGCAGGGTAGGGgc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 45665 17 - 148006 ATAGGCAGGATAGGGTc i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 761407 3278 + 1536524 I e macNem1.NW_012013022v1 8951995 3103 - 10413719 I e nomLeu3.chr17 46798496 271 - 99891981 M a score=374717.000000 s hg38.chr3_KI270784v1_alt 27565 153 + 184404 caggcatggtggctcatacctgtaatccttgcactgtggggggccaaggtgagaggattgcttgaggccaggagctcaagaccagcctggacaacatagcaagacctgggtggc-acacacctgtggtccctactacttggtaggatgaggtgg s panTro5.chr1 222311250 153 + 228573443 caggcatggtggctcatacctgtaatccttgcactgtggggggccaaggtgagaggattgcttgaggccaggagctcaagaacagcctggacgacatagcaagacctgggtggc-atacacctgtggtccctactacttggtaggatgaggtgg i panTro5.chr1 C 0 C 0 s panPan2.chr7 56724379 153 + 162613886 caggcatggtggctcatatgtgtaatccttgcacttttggaggccaaggtgagaggatcacttgaggccaggagctcaagaccagcctgggcaacatagcgagacccAGGTGGCGATGCACCTGTGGTCCC-ACTACTTGGTAGAATGAGGTGG i panPan2.chr7 C 0 M 528 s gorGor5.CYUI01015383v1 4227572 153 + 4392246 caggcatggtggctcatacctgtaatccttgcactgtggggggccaaggtgagaggattgcttgaggccaggagctcaagaccagcctggacaacatagcaagacctgggtggc-atacacctgtggtccctactacttggtaggatgaggtgg i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55104378 153 + 185818997 caggcatggtggctcatacctgtaatccttgtactgtgggaggccaaggtgagaggattgcttgaggccaggagctcaagaccagcctgggcaacatagcaagacctcggtggc-atgcacctgtggtccctattacttggtaggatgaggtgg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127696629 153 - 192294377 caggcatggtggctcatacctgtaatccttgtactgtgggaggccaaggtgagaggattgcttgaggccaggagctcaagaccagcctgggcaacatagcaagacctcggtggc-atgcacctgtggtccctattacttggtaggatgaggtgg i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124153481 153 - 127223203 caggcatggtggctcatacctgtaatccttgtactgtgggaggccaaggtgagaggattgcttgaggccaggagctcaagatcagcctgggcaacatagcaagacctcggtggc-atgcacctgtggtccctactacttggtaggatgaggtgg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 45682 153 - 148006 caggcatggtggctcatacctgtaatccttgtactgtgggaggccaaggtgagaggattgcttgaagccaggagctcaagaccagcctgggcaacatagcaagatctgggtggc-atgcacctgtggtccctagtacttggtaggatgaggtgg i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 42305 0 - 113584 C e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 761407 3278 + 1536524 I e macNem1.NW_012013022v1 8951995 3103 - 10413719 I e nomLeu3.chr17 46798496 271 - 99891981 M a score=52364.000000 s hg38.chr3_KI270784v1_alt 27718 29 + 184404 gaggattgatcacttgatcccaggagttt s panTro5.chr1 222311403 29 + 228573443 gaggattgatcacttgatcccaggagttt i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4227725 29 + 4392246 gaggattgatcacttgatcccaggagttt i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55104531 29 + 185818997 gaggactgatcacttgatcccaggagttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127696782 29 - 192294377 gaggactgatcacttgatcccaggagttt i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124153634 29 - 127223203 gaggactgattatttgacctcaggagttt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 45835 29 - 148006 gaggactgattacttgaccccaggagttt i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 42305 0 - 113584 C e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 761407 3278 + 1536524 I e macNem1.NW_012013022v1 8951995 3103 - 10413719 I e nomLeu3.chr17 46798496 271 - 99891981 M e panPan2.chr7 56724532 528 + 162613886 M a score=170244.000000 s hg38.chr3_KI270784v1_alt 27747 129 + 184404 caggctgcagtgagccatgatcacaccactgcacttcagcctgggtgacagagccagaccatgtcacaaaaagttag------------------aaaaaaaaaag-------aGAGAGGGAGAgagactatacacaggcaccaccacatttgg s panTro5.chr1 222311432 134 + 228573443 caggctgcagtgagccatgatcacaccactgcacttcagcctgggtgacagagccagaccatgtcacaaaaagttag-------------aaagaaaaaaaaaaaG-------AGAGAGGGAGAGAgactatacacaggcaccaccacatttgg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4227754 134 + 4392246 caggctgcagtgagccatgatcacaccactgcacttcagcctgggtgacagagccagaccatgtcacaaaaagttag-------------aaagaaaaaaaaaGAG-------AGAGAGGGAGAGAgactatacacaggcaccaccacatttgg i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46798767 147 - 99891981 CaggctgcagtgagccatgatcacaccactgcacttcagcctgggtgacagagccagaccatgtctcaaaaagtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaG-------AGAGACGGAGAgagactataggcaggtacccccacatttgg i nomLeu3.chr17 M 271 C 0 s rheMac8.chr3 55104560 99 + 185818997 ------------------------------------ca--------gacagagccagaccatgtctcaaaaagttaa-----------aaaaaaaaaaaaaAAAAagagagagagagagagagagagactataggcaggcaccaccacatttga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127696811 96 - 192294377 ------------------------------------ca--------gacagagccagaccatgtctcaaaaagttaa-----------aaaaaaaaaaaaaAAAAA---AGAGAGAGAGAGAGACAgactataggcaggcaccaccacatttga i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124153663 82 - 127223203 ------------------------------------ca--------gacagagccagactatgtctcaaaaagt---------------------aaaaaaaaaaa-------aaaaAGAGAGAGagactataggcaggcaccaccacatttgg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 45864 81 - 148006 ------------------------------------ca--------gacagagccagaccatgtctcaaaaagt----------------------aaaaaaaaaa-------agaGAGAGAGAGAgactataggcaggcaccaccacatttga i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 42305 0 - 113584 C e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 761407 3278 + 1536524 I e macNem1.NW_012013022v1 8951995 3103 - 10413719 I e panPan2.chr7 56724532 528 + 162613886 M a score=139052.000000 s hg38.chr3_KI270784v1_alt 27876 43 + 184404 ctaatttttaaatattctgtagagacaaggtcttgctaggttg s panTro5.chr1 222311566 43 + 228573443 ctaatttttaaatattctgtagagacaaggtcttgctaggttg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4227888 43 + 4392246 ctaatttttaaatattctgtagagacaaggtcttgctatgttg i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46798914 43 - 99891981 ctaatttttaaatattctgtagcgacaaggtcttgctaggttg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55104659 43 + 185818997 ctaatttttaaatattctgtagagacaaggtcttgctaggttg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127696907 43 - 192294377 ctaatttttaaatattctgtagagacaaggtcttgctaggttg i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 42305 43 - 113584 ctaatttttaaatattctgtggagatgaggtcttgctaggttg i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124153745 43 - 127223203 ctaatttttaaatattctgtagagacaaggtcttgctaggttg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 45945 43 - 148006 ctaatttttaaatattctgtagagacaaggtcttgctaggttg i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 761407 3278 + 1536524 I e macNem1.NW_012013022v1 8951995 3103 - 10413719 I e panPan2.chr7 56724532 528 + 162613886 M a score=926761.000000 s hg38.chr3_KI270784v1_alt 27919 250 + 184404 cccaggctagtctaaaactcctggcatcaggctgggcatggtggctcatgcttgtaatcgcagcactttgggaagctaaggcaggcaaatcacctgaagtctggagttcgagaccagcctggccaacacggtgaaactctgactctatcaaaaatacaaaaatcagctgggcagtagtggcgtgt-------gcctgtagtctcacctactcgggaggctgaggcaggagaatcacttgaacctgggaggtggaggt s panTro5.chr1 222311609 250 + 228573443 cccaggctagtctaaaactcctggcatcaggctgggcatggtggctcatgcttgtaatcccagcactttgggaagctaaggcaggcaaatcacctgaagtctggagtttgagaccagcctggccaacatggtgaaactctgactctatcaaaaatacaaaaattagctgggcagtaatggcgtgt-------acctgtagtctcacctactcgggaggctgaggcaggagaatcacttgaacctgggaggtggaggt i panTro5.chr1 C 0 C 0 s panPan2.chr7 56725061 250 + 162613886 CCCAGGCTGGTCTAAAACTCCTGGCATCAggccaggcgtggtggctcatgcctgcaatcccagcactttgggaggccaaggcaggcaaatcacccgaggtcaggagttcgagaccagcctggccaatgtggcgaaaccccatctctgctaaaaatacaaaaattggccaggcagtagtggcatga-------gcctgtaatcccaggtactcgggaggttgaggcaggagaaccatttgaacctgggaggcagaggt i panPan2.chr7 M 528 C 0 s gorGor5.CYUI01015383v1 4227931 246 + 4392246 cccaggctagtctaaaactcctggcatcaggctgggcatggtggctcatgcttgtaatcccagcactttgggaagctaaggcaggcaaatcacccgaagtctggagttcgagaccagcctggccaacatggtgaaactctgactctatcaaaaatacaaaaattagctgggcagtagtggcgtgt-------acctgtagtctcacctactcgggaggctgaggcaggagaatcac-tgaacctggagg---gaggt i gorGor5.CYUI01015383v1 C 0 I 49 s nomLeu3.chr17 46798957 257 - 99891981 cccaggctggtctaaaactcctgacatcaggctgggcatggtggctcatgcttgtaatcccagcactttgggaggctgaggcaggcaaatcacctgaagtcaggagttcgagaccagcctggccaacatggtgaaactccgactctactaaaaatacaaaaataagccgggcagtagtggcatgtacctgtagcctgtagtctcagctactcaggaggctgaggcaggagaatcacttgaaccttggaggcagaggt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55104702 249 + 185818997 cccaggctggtctaaaactcctggcatcaggctgggcatgggggctcatgcttgtaatcccagcactttgggaggctgaggcaggcaaatcacctgaagtcaggagttcgagaccagcctggccaacatggtgaaactccgactctactaaaaatac-aaaattagccgggcagtagtggcgtgt-------acctgtagtctcagctacttgggaggctgagtcaggagaatcacttgaacctgggaggcggaggt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127696950 249 - 192294377 cccaggctggtctaaaactcctggcatcaggctgggcatgggggctcatgcttgtaatcccagcactttgggaggctgaggcaggcaaatcacctgaagtcaggagttcgagaccagcctggccaacatggtgaaactccgactctactaaaaatac-aaaattagccgggcagtagtggcgtgt-------acatgtagtctcagctacttgggaggctgagtcaggagaatcacttgaacctgggaggcggaggt i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 42348 250 - 113584 cccaggctggtctaaaactcctggcatcaggctgggcatgggggctcatgcttgtaatcccagcactttgggaggctgaggcaggcaaatcacctgaagtcaggagttcgagaccagcctggccaacatggtgaaactctgactctactgaaaatacaaaaattagccgggcagcagtggcgtgt-------acctgtagcctcagctacttgggagagtgaggcaggagaatcacttgaacctgggaggcagaggt i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124153788 248 - 127223203 cccaggctggtctaaaactcctggtgtcaggctgggcatggtggctgatgcttgtaatcccagcactttagaaggctgaggcaggcaaatcacctgaagtcaggagtttgagaccagcctggccaacatggtg--actccgactctactaaaaatacaaaaattagccgggcagtagtggcatgt-------acctgtagtctcagctacttgggaggctgagtcaggagaatcacttgaacctgggaggcggaggt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 45988 248 - 148006 cccaggctggtctaaaactcctggcatcaggctgggcatgggggctcatgcttgtaatcccagcactttagaaggctgaggcaggcaaatcacctgaagtcaggagtttgagaccagcctggccaacatggtg--actccgactctactaaaaatacaaaaattagccgggcagtagtggcgtgt-------acctgtagtctcagctacttgggaggctgagtcaggagaatcacttgaacctgggaggcggaggt i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 761407 3278 + 1536524 I e macNem1.NW_012013022v1 8951995 3103 - 10413719 I a score=107135.000000 s hg38.chr3_KI270784v1_alt 28169 51 + 184404 tgcagtg------gaccccatcac----tgcactccaccctgggtgacagagcgagact--GT s panTro5.chr1 222311859 53 + 228573443 tgcagtg------gaccccatcac----tgcactccaccctgggtgacagagcgagactctgt i panTro5.chr1 C 0 C 0 s panPan2.chr7 56725311 63 + 162613886 tgcagtgagtcaagatcacgtcactgcatgcattccaccctgggtgacaaagtgagactctgt i panPan2.chr7 C 0 C 0 s nomLeu3.chr17 46799214 55 - 99891981 tgcagtgggccaagatcgtaccac----tgcactccaccctgggcaacagagtgaaact---- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55104951 57 + 185818997 tgcagtgggccaagatcgcaccac----tgcactccactctgggccacagagtgagactct-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127697199 57 - 192294377 tgcagtgggccaagatcgcaccac----tgcactccactctgggccacagagtgagactct-- i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 42598 42 - 113584 cgcagtgggcc------------------gcactccaccctgggtgacagagcaag-ctct-- i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124154036 57 - 127223203 tgcagtgggccaagattgtaccac----tgcactccaccctaggcaacagagtgagactct-- i chlSab2.chr21 C 0 I 16 s manLeu1.NW_012100344v1 46236 57 - 148006 tgcagtgggccaagatcgtaccac----tgcactccaccctaggcaacagagtgagactct-- i manLeu1.NW_012100344v1 C 0 I 17 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 761407 3278 + 1536524 I e macNem1.NW_012013022v1 8951995 3103 - 10413719 I e gorGor5.CYUI01015383v1 4228177 49 + 4392246 I a score=-2360.000000 s hg38.chr3_KI270784v1_alt 28220 1 + 184404 -c s panTro5.chr1 222311912 1 + 228573443 -c i panTro5.chr1 C 0 C 0 s panPan2.chr7 56725374 1 + 162613886 -c i panPan2.chr7 C 0 C 0 s rheMac8.chr3 55105008 1 + 185818997 g- i rheMac8.chr3 C 0 I 17 s cerAty1.NW_012005081v1 42640 1 - 113584 g- i cerAty1.NW_012005081v1 C 0 I 2 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 761407 3278 + 1536524 I e manLeu1.NW_012100344v1 46293 17 - 148006 I e chlSab2.chr21 124154093 16 - 127223203 I e macNem1.NW_012013022v1 8951995 3103 - 10413719 I e macFas5.chr3 127697256 0 - 192294377 C e nomLeu3.chr17 46799269 0 - 99891981 C e gorGor5.CYUI01015383v1 4228177 49 + 4392246 I a score=-155.000000 s hg38.chr3_KI270784v1_alt 28221 1 + 184404 a s panTro5.chr1 222311913 1 + 228573443 A i panTro5.chr1 C 0 C 0 s panPan2.chr7 56725375 1 + 162613886 t i panPan2.chr7 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 42641 2 - 113584 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 761407 3278 + 1536524 I e rheMac8.chr3 55105009 17 + 185818997 I e manLeu1.NW_012100344v1 46293 17 - 148006 I e chlSab2.chr21 124154093 16 - 127223203 I e macNem1.NW_012013022v1 8951995 3103 - 10413719 I e macFas5.chr3 127697256 0 - 192294377 C e nomLeu3.chr17 46799269 0 - 99891981 C e gorGor5.CYUI01015383v1 4228177 49 + 4392246 I a score=-16202.000000 s hg38.chr3_KI270784v1_alt 28222 38 + 184404 a---caacaacaaca--acaacaaaaacaaaaacaacaacaa------c s panTro5.chr1 222311914 41 + 228573443 AAaacaacaacaaca--ataacaaaaacaaaaacaacaacaa------c i panTro5.chr1 C 0 C 0 s panPan2.chr7 56725376 32 + 162613886 ----caaaacaaaca-------aacaacaaacaaacaaacaa------a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4228226 46 + 4392246 ---acaacaactccaaaaaaacaaaaaaaaaaaaaaaaacaaaacaaca i gorGor5.CYUI01015383v1 I 49 C 0 s nomLeu3.chr17 46799269 17 - 99891981 ---------------ctatcttaaaaaaaaa-----------------a i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127697256 17 - 192294377 -------------------gtctgaaaaaaaaacag------------- i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 42643 14 - 113584 --------------------taaaaagaaaaaac--------------- i cerAty1.NW_012005081v1 I 2 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 761407 3278 + 1536524 I e rheMac8.chr3 55105009 17 + 185818997 I e manLeu1.NW_012100344v1 46293 17 - 148006 I e chlSab2.chr21 124154093 16 - 127223203 I e macNem1.NW_012013022v1 8951995 3103 - 10413719 I a score=405861.000000 s hg38.chr3_KI270784v1_alt 28260 110 + 184404 aaaaaaaactcctggcatcaagacatcttcctgtct--------tagcctcccaaagccctgggatta-----taCTGTTTCCTATAATTGAAGACACTTGTTCTTATACTGCTTTAAGGTAT s panTro5.chr1 222311955 110 + 228573443 aacaaaaactcctggcatcaagacatcttcctgtct--------tagcctcccaatgccctgggatta-----taCTGTTTCCTATAATTGAAGACACTTGTTCTTATACTGCTTTAAGGTAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 56725408 123 + 162613886 caaaaaaacTCCTGGCATCAAAAGATCTTCCTATCTCACCCTCCCACCCTCCCAATGCCCTGGGATTATTATTTTTTGTTTACTATAATTGAAGACACTTGTTCTTATACTGCTTTAAGATAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4228272 110 + 4392246 aaaaaaaactcctggcatcaagacatcttcctgtct--------tagcctcccaatgccctgggatta-----taCTGTTTCCTATAATTGAAGACACTTGTTCTTATACTGCTTTAAGGTAT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46799286 110 - 99891981 aaaaaaaactcctggcatcaagacatcttcctgtct--------tagcttcccaataccctgggatta-----taTTGTTTCCTATAATTGAAGGCACTCGTTCTTATACTGCTTTAAGGTAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55105026 110 + 185818997 aaaacaaactcctggcatcaacacatcttcctgtct--------tagcctccaaatgccctgggatta-----TGTTGTTTCCTATAATTGAAGACACTTGTTCTTATACTGCTTTAAGGTAT i rheMac8.chr3 I 17 C 0 s macFas5.chr3 127697273 110 - 192294377 aaaacaaactcctggcatcaacacatcttcctgtct--------tagcctccaaatgccctgggatta-----TGTTGTTTCCTATAATTGAAGACACTTGTTCTTATACTGCTTTAAGGTAT i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 42657 109 - 113584 -aaacaaaatcctggcatcaacacatcttcctgtct--------tagcctcccaatgccctgggatta-----taCTGTTTCTTATAATTGAAGACACTTGTTCTTATATTGCTTTAAGGTAT i cerAty1.NW_012005081v1 C 0 I 24 s chlSab2.chr21 124154109 110 - 127223203 aaaacaaactcctggcatcagcacatcttcctgtct--------tagcctcccaatgccctgggatta-----taTTGTTTCCTATAATTGAAGACACTTGTTCTTATACTGCTTTAAGGTAT i chlSab2.chr21 I 16 C 0 s manLeu1.NW_012100344v1 46310 110 - 148006 aaaacaaactcctggcatcaacacatcttcctatct--------tagcctccaaatgccctgggatta-----TGTTGTTTCCTATAGTTGAAGACACTTGTTCTTATACTGCTTTAAGGTAT i manLeu1.NW_012100344v1 I 17 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 761407 3278 + 1536524 I e macNem1.NW_012013022v1 8951995 3103 - 10413719 I a score=20510.000000 s hg38.chr3_KI270784v1_alt 28370 21 + 184404 -AAAGGAAGA-AAaaaaaaacag s panTro5.chr1 222312065 20 + 228573443 -AAAGGAAGA-Aaaaaaaa-cag i panTro5.chr1 C 0 C 0 s panPan2.chr7 56725531 15 + 162613886 -AAAG------AAAAAAAA-CAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4228382 21 + 4392246 -AAAGGAAGA-AAaaaaaaacag i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46799396 15 - 99891981 -AAAG------Aaaaaaaa-ccc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55105136 18 + 185818997 AAAAGGAAa--aaaaaaaa-c-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127697383 18 - 192294377 AAAAGGAAA--AAAAAAAA-C-- i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124154219 20 - 127223203 AAAAGAAAAAGaaaaaaaa-c-- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 46420 19 - 148006 AAAAGAaaaa-aaaaaaaa-c-- i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e cerAty1.NW_012005081v1 42766 24 - 113584 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 761407 3278 + 1536524 I e macNem1.NW_012013022v1 8951995 3103 - 10413719 I a score=5134391.000000 s hg38.chr3_KI270784v1_alt 28391 1485 + 184404 ataatggcaaatgttggtgaaggccgggcatggtggc--agcctgtaattcc-----agaacttagggaggctgaggt----------------------------------------------------------------------gggcagatcacttgaggccaggagtatgagaccagcctgggcaacatggtaaaatcccaccactacagaaaaatataaaaattagccaggcatggtggcgtacacctgtaattttcagctacccaggaggctgagatgagagaatcacttgtgcctgggaggtcacggctgcagtgaactgtgatggcatcattgcactgcggcctgagagacagagcaagcccctatctag--aaaaaaaaa---tgtcagt---------gaagatgtggaggaattggaacccacatacattactggtgggaacataaaattgtgtaaccattttgtttgggtatttcttTTCTTGTCATTTTAATTGGA--------TTTTTAAAAAATCAagacggggtttcactatcttgcccaggctggtcttgaattcacgggctcaagccatcctcctagctgagcctcctgagtagctgggatt---acaggtgtgagccattgcacccaactggtatagccacgttagaaaacattctggcagtttctcaaaaggctaaatgtacagtcatcctataatgcaacaatttcactcctaggcatatatcccagaaaaataaaaatatatgtccacacaaaaac---ttgtacaacaatcttcatagcagcattattcataatgaccaatacatggaatacatggaaacaacccaaatatccaccaactgatgaacagataaacaaaatgcagtgtgtctctaccatggaatact-----gccatagaaggaatgaaatattgatacacactatgacataaaggaactttgaaaacactgtgctaagaggg--aaaaaaagccacaaaagatcacatattgtacaattctatttgtccagattaggcaaatctatagtgacaaaaaaattaatcaatggttgcctaaggct-gggggcaaaggtaggt-gggg---------agagtaggaggtagtggctaaggggtatggatttctctatagggtaatgaaaggttctaaaagtgactgtggtgatcgatgcacag--ctctgtgaatattctaaaacctactgaattgcagatttc----aataaataaagtgaatggtatgtga---atattttaataaagctattaTTTAAAATAATAATAATAGGGggctgggcacaggtggtcatgcctgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgaggtcaggagttttgagcccagtcggagcaacatggcaagatcccgtctctatgata--------aaaaattacctggacatggtggcacatgtctgtagtcccagctacttgggagactgaagtgagagaaccacttgagcccaggagtttgaggctacagtgaaccatgatcatgtcactgtactgtagcctaagcaacagagcaagacgctgtctctgaaaaggaaagaaaac s panTro5.chr1 222312085 1487 + 228573443 ataatggcaaatgttggtgaaggccgggcatggtggc--agcctgtaattcc-----agaacttagggaggctgaggt----------------------------------------------------------------------gggcagatcacttgaggccaggagtatgagaccagcctgggcaacatggtaaaatcccatcactacagaaaaatataaaaattagccaggcatggtggcgtacacctgtaattttcagctactcaggaggctgagatgagagaatcacttgtgcctgggaggtcaaggctgcagtggactgtgatggcatcattgcactgcagcctgagagacagagcaagcccctatctag--aaaaaaaaaaaatgtcagt---------gaagatgtggaggaattggaacccacatacattactggtgggaacataaaattgtgtaaccattttgtttgggtatttcttTTCTTGTCATTTTAATTGGA--------TTTTTAAAAAATCAagacagggtttcactatcttgcccaggctggtcttgaattcatgggctcaagccatcctcctagctgagcctcctgagtagctgggatt---acaggtgtgagccattgcacccaactggtatagccacattagaaaacagtctggcagtttctcaaaaggctaaatgtacagtcatcctataatgcaacaatttcactcctaggcatatatcccagaaaaataaaaatatatgtccacacaaaaac---ttgtacaacaatcttcatagcagcattattcataatgaccaatacatggaatacatggaaacaacccaaatatccaccaactgatgaacagataaacaaaacgcagtgtgtctctaccatggaatact-----gccatagaaggaatgaaatattgatacacactatgacataaaggaactttgaaaacactgtgctaagaggg--gaaaaaagccacaaaagatcacatattgtacaattctatttgtccagattaggcaaatctacagtgacaaaaaaattaatcaatggttgcctaaggct-gggggcgaaggtaggt-gggg---------agagtaggaggtagtggctaaggggtatggatttctctatagggtaatgaaaggttctaaaagtga-tgtggtgatcgatgcacag--ctctgtgaatattctaaaacctactgaattgcagatttc----aataaataaagtgaatggtatgtga---atattttaataaagctattatttaaaaTAATAATAATAGGGggctgggcacaggtggtcatgcctgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgaggtcaggagttttgagcccagtcagagcaacgtggcaagatcccgtctctatgata--------aaaaattagctggacatggtggcacatgtctgtagtcccagctacttgggagactgaagtgagagaaccgcttgagcccaggagtttgaggctacagtgaaccatgatcatgtcactgtactgtagcctgagcaacagagcaagacgctgtctctgaaaaggaaagaaaac i panTro5.chr1 C 0 C 0 s panPan2.chr7 56725546 1516 + 162613886 ATAATAACAAATGTTGGTGAAGGCCGGGCACAGTGGCTTAGCCTGTAA-----------------------------TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgggcagatcacttggggccaggagtaagagaccagcctgagcaacatggtaaaaccccatcactacaaaaaaatataaaaattagccaggcatggtggcatgcacctgtaattatcagctactcaggaggctgagatgagaaaatcacttgtgcctgggaggtcaaggctgcagtgaactgtgatggcgtcactgtgctgcagcctgagagacagagcaagcccctgtctag--aaaaaaaaa-aaagtcagc---------gaagatgtggaggaattggaacccacatacattactgttgggaacataaaatcgtgtaacca--------------cGCTTTTCTTGTCATTTTAATTGGA--------TTTTTAAAAAATCAagacagggtcttgctatcttgcccaggctgatcttgaacttgtgggctcaagccatcctcccaactgagcctcctgagtagctgggact---acaggtgtgagccatcacacccaactggtgtagccactttagaagacaaactggcagtttctcaaaaggctaaatatacagtcatcatataatgcaacaatttcactcctaggcatatatcccagagaaacagaaatatatgtccgcacaaaaac---ttgtacagcaatcttcatagcagcattgttcataatagcc---------aatacgtggaaacaacccaaatgtccaccaactgatgaacagataaacaaaatgcagtgtgtctctaccatggaatattattcagccatacaagaaatgaaatactgatacacactatgacataaaggaactttgaaaacattgtgctaagagggaaaaaaaaagccacaaaagatcacatattgtacaattctatttgtccagattaggaaattctatagtgat-aaaaaatgaatcaatggttgcctaaggctggggggccaaggcaggtagggg---------ggagtaggaggtagtggctaagaggtgtggatttctctatacggtaatgaaaggttctaaaagtgactgtggtgatcgatgcacag--ctctgtgaatattctaaaacctactgaattgcaggtttcaataaataaataaattgaagggtatgtgaatcatattttaatacagctattaTTTAAAATAATAA------GTggctgggcacaggtggtcatgcctgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgaggtcaggag-tttgagcctagtctgagcaatctagcaagatcccatctctatgataaaaaatt-aaaaattagctgggcatggtggcacacgtccgtagtcccagctacctgggagact-------gaggattgcttaagcccaggagtttgaggcaacagtgaaccatgatcatgtcactgtactgcagcctgggtgacagagcaagaccctgtctctaaaaaggaaaga---- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4228403 1484 + 4392246 ataatggcaaatgttggtgaaggccgggcatggtggc--agcctgtaattcc-----agaacttagggaggctgaggt----------------------------------------------------------------------gggcagatcacttgaggccaggagtatgagaccagcctgggcaacatggtaaaatcccatcactacaaaaaaatataaaaattagccaggcatggtggcgtacacctgtaattttcagccactcaggaggctgagatgagagaatcacttgtgcctgggaggtcaaggctgcagtgaactgtgatggcatcattgcactgcggcctgagagacagagcaagcccctatctag--aaaaaaaaa-aatgtcagt---------gaagatgtggaggaattggaacccacatacattactggtgggaacataaaatcgtgtaaccattttgtttgggtatttc-ttTCTTGTCATTTTAAttgga--------tttttaaaaaatcaacacagggtttcactatcttgcccaggctggtcttgaattcatgggctcaagccatcctcctagctgagcctcctgagtagctgggatt---acaggtgtgagccattgcacccaactggtgtagccacgttagaaaacagtctggcagtttctcaaaaggctaaatgtacagtcatcctataatgcaacaatttcactcctaggcatatatcccagaaaaataaaaatatatgtccacacaaaaac---ttgtacaacaatcttcatagcagcattattcataatgaccaatacatggaatacatggaaacaacccaaatatccaccaactgatgaacagataaacaaaatgcagtgtgtctctaccatggaatact-----gccatagaaggaatgaaatattgatacacactatgacataaaggaactttgaaaacactgtgctaagaggg--aaaaaaagccacaaaagatcacatattgtacaattctatttgtccagattaggcaaatctatagtgacaaaaaaattaatcaatggttgcctaaggct-gggggcgaaggtaggt-gggg---------agagtaggaggtagtggct-aggggtatggatttctctatagggtaatgaaaggttctaaaagtgactgtggtgatcgatgcacag--ctctgtgaatattctaaaacctactgaattgcagatttc----aataaataaagtgaatggtatgtga---atattttaataaagctatta-TTAAAATAATAATAATAGGGggctgggcacaggtggtcatgcctgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgaggtcaggagttttgagcccagtcggagcaacgtggcaagatcccgtctctatgata--------aaaaattagctggacatggtggcacatgtctgtagtcccagctacttgggagactgaagtgagagaaccgcttgagcccaggagtttgaggctacagtgaaccatgatcatgtcactgtactgtagcctgagcaacagagcaagacgctgtctctgaaaaggaaagaaaac i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46799411 1475 - 99891981 ataacgacaaatgttggtaaaggccgggcatggtggctcagcctgtaattcc-----agaactttgggaggctgaggt----------------------------------------------------------------------gggcagatcacttgaggccaggagtatgagaccaacctaggcaacatggtaaaatcccatc------------tataaaaattagccagg-atggtggcatacacctgtaattttcagctactcaggaggctgagatgagagaatcatttgtgcctgggaggtcaaggctgcaatgaactgtgatggcatcgttgcgctgcagcctgagagacagagcaagcccctgtctag--aaaaaaaaaaaatgtcagt---------gaagatgtggaggagctggaacccacatacattagtggtgggaacattaaatcgtgtaaccactttgTTTGGGTAGTTCTGTTCTTGTCATTTTAATTGGA-------ttttttttttaatcaagacagggtttcactatcttgcccaggctggtcttgaatttattggctcaat---tcctcccagccgagcctcctgagcagctgggatt---acaggtgtgagccattgcacccaactggtgtagccactttagaaaacagtgtggcagtttctcaaaaggctaaatgtacagtcatcatataatgcaacaatttcactcctaggcatatatcccagagaaataaaaatgtatgtccacacaaaaac---ttgtacaacaatcttcatagcagcattattcataatggcc---------aatacatggaaacaacccaaatgtccatcaactgatgaacagataaacaaaatgcagtgtgtctctaccatgtaatatt-----gccatagaaggaatgaaatattgatacacactatgacataaaggaactttgaaaacactgtgctaagaggg--aaaaaaagccacaaaagatcacatattgtacaattctatttgtccagattaggcaaatctatagtgac-gaaaaatgaatcaatggctgcctaaggct-ggtggccaaggcaggt-tggg---------ggagtaggaggtagtggctaaggggtatggatttctctacagggtaatgaaaggttctaaaagtgactgtggtgatcgatgcacag--ctctgtgaatattctaaaacctactgaattgcagatttc----aataaataaagtgaatggtatgtgaatcatattttaataaagctattaTTTAAAATAATAATAATAGGGggctgggcacaggtggtcatgcctgcctgtaatcccagcactttgggaggctgaggcaagaggatcacttgaagtcagtagttttgagcccagtctgagcaacctggcaagatcctgtctctatgataaaaaatgaaaaaattagctggacatggtggcacatgtctgtagtcccagctacttgggagactgaagtgggagaactgcttgagcccaggagtttgaggct-cagtgaaccaagatcatgtcactgtactgcagcctgagcaacacagcaagaccctgtctctgaaaaggaaagaaaac i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55105154 1447 + 185818997 ataatgacaaatgttggtgaaggccaggcatggtggctcagcctgtaattcc-----agaactttgggaggctgaggt----------------------------------------------------------------------gggcagatcactcaaggccaggagtatgagaccagcctgggtgacatggtaaaatccgatcactccaaaaatatataaaaattagccaggcgt--------------------------------------tgagatgagagaatcacttgtgcctgggaggtcaaggctgcagtg-actgtgatggtgtccttgggctgcagcctgaaagacagagc-agcccctatctag--aaaaaaaaataatgtcagtgaagatgtggaagatgtggaggaattggaacccacatacattactggtgggaacataaaatcgtgtaaacactttgTTTGGGTATTTCTTTTCCTGTCATTTTAATTAGA----ttttttttttttaaatcaagacagggtttcactatcttgcccaggctggtcttgaattcatgggctcaat---tcctcccatcggagcctcctgagtagctgggatt---acaggtgtgagccatcacacccaactggtgtagccacttaagaaaacagtctggcagtttctcaaaaa-------gtacagtcagcatataatgcaacaatttcactcctaggcatatatcccagagaaataaaaatatatatccacacaaatatatattgtacaacaatcttcatagcagcattattcataatggcc---------aaaacatggaaacaacccaaatgtccactaactgatgaacagataaacaaaatgcagcgtgtctctaccatggaatattactcagccataggagg-atgaaatattgatacacactatgacataaagcaactttgaaaacattgtgctaagaggg--aaaaaaagccacaaaagatcacatattgtacaattctatttgtccaaattaggcaaatctatagcgacaaaaaaatgaatcaatggttgcctaaggct-gggagccaaggcaggt-tggg---------ggagtaggaggtagtggctaaggggtatggatttctctatagggtaataaaaggttctaaaagtgactgtggtgatcgatgcacag--ctc--tgaatattctaaaacctactgaattgcagatttc----aataaataaagtgaatggcatgtgaataatattttaacaaagctattaTTTAAAATAATAATAATAGGGggctgggcacaggtagtcatgcctgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgaggtcaggagttttgagccaagtctgagcaacctggcaagatcccatctctacaataaaaaatgaaaaaat-------------tggcacacgtctgtagtcccagctacttgggagactgaagtgggagaactgcttgagcccaggagtttgaggctacagtgaaccatgaccacgtcactgtactgcagcctgagcaacagagcaagactctgtctctaaaaaggaaagaaaac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127697401 1447 - 192294377 ATAATGACAAATGTTGGTGAAggccaggcatggtggctcagcctgtaattcc-----agaactttgggaggctgaggt----------------------------------------------------------------------gggcagatcactcaaggccaggagtatgagaccagcctgggtgacatggtaaaatccgatcactccaaaaatatataaaaattagccaggcgt--------------------------------------tgagatgagagaatcacttgtgcctgggaggtcaaggctgcagtg-actgtgatggtgtccttgggctgcagcctgaaagacagagc-agcccctatctag--aaaaaaaaaTAATGGCAGTGAAGATGTGgaagatgtggaggaattggaacccacatacattactggtgggaacataaaatcgtgtaaacactttgtttgggtatttCTTTTCCTGTCATTTTAATTAGA----ttttttttttttaaatcaagacagggtttcactatcttgcccaggctggtcttgaattcatgggctcaat---tcctcccatcggagcctcctgagtagctgggatt---acaggtgtgagccatcacacccaactggtgtagccacttaagaaaacagtctggcagtttctcaaaaa-------gtacagtcagcatataatgcaacaatttcactcctaggcatatatcccagagaaataaaaatatatatccacacaaatatatattgtacaacaatcttcatagcagcattattcataatggcc---------aaaacatggaaacaacccaaatgtccactaactgatgaacagataaacaaaatgcagcgtgtctctaccatggaatattactcagccataggagg-atgaaatattgatacacactatgacataaagcaactttgaaaacattgtgctaagaggg--aaaaaaagccacaaaagatcacatattgtacaattctatttgtccaaattaggcaaatctatagcgacaaaaaaatgaatcaatggttgcctaaggct-gggagccaaggcaggt-tggg---------ggagtaggaggtagtggctaaggggtatggatttctctatagggtaataaaaggttctaaaagtgactgtggtgatcgatgcacag--ctc--tgaatattctaaaacctactgaattgcagatttc----aataaataaagtgaatggcatgtgaataatattttaacaaagctattaTTTAAAATAATAATAATAGGGGGCTGGGCACAGGTAGTCATGCCTgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgaggtcaggagttttgagcctagtgtgagcaacctggcaagatcccatctctacaataaaaaatgaaaaaat-------------tggcacacgtctgtagtcccagctacttgggagactgaagtgggagaactgcttgagcccaggagtttgaggctacagtgaaccatgaccacgtcactgtactgcagcctgagcaacagagcaagactctgtctctaaaaaggaaagaaaac i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 42790 1515 - 113584 ataatgacaaatgttggtgaaggccaggcatggtggctcagcctgtaattctttttaagaattttgggaggctgaggt----------------------------------------------------------------------gggcagctcccttgaggccaggagtatgagaccagcctaagcaacatggtaaaatcccatcactacaaaaaaatataaaaattagccaggcatggtggcgtacacctgtaattttcagctactcaggagcctgagatgagagaatcacttgtgaccgggaggtcaaggctgcagtgaactgtgatggcatcattgcactgtagcctgagagacagagcaagcccctatctag-aaaaaaaaaataatgtcagt---------gaagatgcagaggaattggag-ccacatacattactggtgggaacataaaagcgtgtaatcac----tttggGTATTTCTTTTCTTGTCATTTTAATTAGAttctttttttttttttaaatgaagacagggtttcactatcttgcccaggctggtcttgaattcatgggctcaagccatcctcccatcttagcctcctgagtagctaggattacaacaggtgtgagccatcgcacccaactggtgtagccactttagaaaacagtctggcagtttctcaaaaggctaaacgtatagttatcatataatgcaacaatttcactcctaggcatatatcccagaaaaataaaaatatatgtccacacaaaaac---ttgtacaacaatcttcatagcagcattattcacagtggcc---------aaaacatggaaacaacccaaatatccaccaactgatgaacagataaacaaaatgcagtgtgcctctaccacggaatattactcagccacagaaggaatgaaacattgatacacactatgacataaagaaactttgaaaacgttgtgctaagaggggaaaaaaaagccacaaaagatcacatattgtacaattgcatttgaccagattaggcaaatccatagtgac-aaaaaatgaatcaaaggttgcctaaggct-ggaggccaaggcaggt-ggggggagtagaaggagtagaaggtagtggctaaggggtatggatttctctatagggtaataaaaggttctaaaagtcactgtggtgatcgatgcacagctctc--tgaatattctaaaacctactgaattgcagatttc----aataaataaagtgaatggcatgttaataatattttaataaagccattatttaaaaTAATAATAATAGGGggctgggcacaggtggtcatgccagcctgtaatcccagcactttgggaggctgagtcaggaggatcacttgaggtcaggagttttgagcccagtctgagcaacctggcaagatcccatctctatgataaaaaatgaaaaaattagctgggcatggtggcacacgcctgtagtcccagctatttcggagactgaagtgggagaactgcttgagtccaggagtttgaggctacagtgaaccatgaccatgtcattgtactgcagcct----aacagagcaagaccctgtctctaaaaaggaaagaaaac i cerAty1.NW_012005081v1 I 24 C 0 s chlSab2.chr21 124154239 1447 - 127223203 ataatgacaaatgttggtgaaggccaggcatggtggctcagcctgtaattcc-----agaactttgggaggctgaggt----------------------------------------------------------------------gggtagatcactcaaggccaggagtatgaggccagcctgggcgacacggtaaaatccgatcactccaaaaatatataaaaattagccaggcat--------------------------------------tgagatcagagaatcacttgtgcctgggaggtcaaggctgcagtg-actgtgatggtgtccttgggctgcagcctgagagacagagc-agcccctatctag--aaaaaaaaataatggcagtgaagatgtggaagatgtggaggaattggaacccacatacattactcgtgggaacatcaaatcgtgtaaacactttgTTTGGGTACTTCTTTTCCTGTTATTTTAATTAGA----ttttttttttttaaatcaagacagggtttcactatcttgcccaggctggtcttgaattcatgggctcaat---tcctcccatcggcgcctcctgagtagctgggatt---acaggtgtgagccatcacacccaactggtgtagccacttaagaaaacagtctggcagtttctcaaaat-------gtacagtcagcatataatgcaacaatttcactcctaggcatatatcccagagaaataaaaatatatatccacacaaatatatattgtacaacaatcttcatagcagcattattcataatggcc---------aaaacatgaagacaacccaaatgtccaccaactgatgaacagataaacaaaatgcagcgtatctctaccacggaatattactcagcaataggacg-atgaaatattgatacacactatgacataaaggaactttgaaaacattgtgctaagaggg--aaaaaaagccacaaaagatcacatattgtacaattctatttgtccagattaggcaaatctatagcgacaaaaaaatgaatcaatggttgcctaaggct-gggagccaaggcaggt-tggg---------ggagtaggaagtagtggctaaggggtatggatttctctatagggtaataaaaggttctaaaagtgactgtggtgatcgatgcacag--ctc--tgaatattctaaaacctactgaattgcagatttc----aataaataaagtgaaaggcatgtgaataatattttaataaagctattaTTTAAAATAATAATAATAGGGGGCTGGGCACAGGTAGTCATGCCTgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgaggtcaggagttttgagcccactctgagcaacctggcaagatcccatctctacgataaaaaatgaaaaaat-------------tggcacacgtctgtagtcccagctacttgggagactgaagtgggagaactgcttgagcccaggagtttgaggctacagtgaaccatgaccacgtcactgtactgcagcctgagcaacagagcaagactctgtctctaaaaaggaaagaaaac i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 46439 1446 - 148006 ataatgacaaatgttggtgaaggccaggcatggtggctcagcctgtaattcc-----agaactttgggaggctgaggt----------------------------------------------------------------------gggcagatcactcaaggccaggagtatgagaccagcctgggcgacatggtaaaatccgatcactccaaaaatatataaaaattagccaggcgt--------------------------------------tgagatgagagaatcacttgtgcctgggaggtcaaggctgcagtg-actgtgatggtgtccttgggctgcagcctgagagacagagc-agcccctatctagaaaaaaaaaaataatggcagtgaagatgtggaagatgtggaggaactggaacccacatacattactcgtgggaacatcaaatcgtgtaaacactttgtttgggtatttcttTTCCTGTCATTTTAATTAGAtt--tttttttttttttaatcaagacagggtttcactatcttgcccaggctggtcttcaattcatgggctcaat---tcctcccatcggagcctcctgagtagctgggatg---acaggtgtgagccatcacacccaactggtgtagccacttaagaaaacagtctggcagtttctcaaaaa-------gtacagtcagcatataatgcaacaatttcactcctaggcatatattccagagaaataaaaatatatatccacacaaatatatattgtacaacaatcttcatagcagcattattcataatggcc---------aaaacatggaaacaacccaaatgtccaccaactgatgaacagataaacaaaatgcagcgtgtctctaccatggaatattactcagccataggagg-atgaaatattgatacacactataacataaaggaactttgaaaacattgtgctaagaggg--aaaaaaagccacaaaagatcacatattgtacaattctatttgtccaaattaggcaaatctatagtgacaaaaaaatgaatcaatggttgcctaaggct-gggagccaaggcaggt-tggg---------ggagtaggaggtagtggctaaggggtatggatttctctatagggtaataaaaggttctaaaagtgactgtggtgatcgatgcacag--ctc--tgaatattctaaaacctactgaattgcagatttc----aataaataaagtgaatggcatgtgaataatattttaacaaagctattaTTTAA---AATAATAATAGGGGGCTGGGCACAGGTAGTCATGCCTgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgaggtcaggagttttgagcccagtctgagcaacctggcaagatcccacctctacaataaaaaatgaaaaaac-------------tggcacacgtctgtagtcccagctacttgggagactgaagtgggagaactgcttgagcccaggagttcgaggctacagtgaaccatgaccacgtcactgtactgcagcctgagcaacagagcaaga--ctgtctctaaaaaggaaagaaaac i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 761407 3278 + 1536524 I e macNem1.NW_012013022v1 8951995 3103 - 10413719 I a score=1335654.000000 s hg38.chr3_KI270784v1_alt 29876 301 + 184404 aaaTGCaagtttttatcactttgtgagtgtagccaagttggaggagaaatagacaataataaaagagcactgaataatgacagtgagtggctggttaggctcagttgctagctaaatggctTCTAAAAAATTC---AATAAAGTTACAGCTCTGGGGACAGTCATGTAGTCAAAGAATGAAGGCGAAATTCATTACAATTGCCCATGGTCTTTATTTACATGCCTTCTAGTGAAAAATTCCTAAGTGCCTAAACAGCAAGTCTGCAATGATAGCAGCTGTTTATTAAAGACTACAAAAAAGAAA s panTro5.chr1 222313572 301 + 228573443 aaaTGCaagtttttatcactttgtgagtgtagccaagttggaggagaaatagacaataataaaagagcactgaataatgacggtgagtagctggttaggctcagttgctagctaaatggctTCTAAAAAATTC---AATAAAGTTACAGCTCTGGGGACAGTCATGTGGTCAAAGAATGAACGCTAAATTCATTACAATTGCCCATGGTCTTTATTTACATGCCTTCTAGTGAAAAATTCCTAAGTGCCTAAACAGCAAGTCTGCAATGATAGCAGCTGTTTATTAAAGACTACAAAAAAGAAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 56727062 304 + 162613886 aaaTACaagtttttatcactttgtgagtgtagccaagtttgaggagaaatagacaagaataaaagagcactgaataacgagagtaagtggctggtaaggcccagttgctagctaagtggctTCTGAAACATTCATTAGTAAAGTTAAAGCTCTGGGTACAGTCATGCAGTCAAAGAATGAATGCTAAATTCATTACAAATGCTGATGGTCTTTCTTTACATGCCTTCTAGTGAAAAATTCCTAAGTGCCTAAATAGCAAGTCTGCAATGATAGCAGCTGTTTATTAACGACTACAAAAAAGAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4229887 301 + 4392246 aaaTGCaagtttttatcactttgtgagtgtagccaagttggaggagaaatagacaataataaaagagcactgaataatgacggtgagtggctggttaggctcagttgctagctaaatggctTCTAAAAAATTC---AATAAAGTTACAGCTCTGGGGACAGTCATGTAGTCAAAGAATGAATGCTAAATTCATTACAAATGCCCATGGTCTTTATTTACATGCCTTCTAGTGAAAAATTCCTAAGTGCCTAAATAGCAAGTCTGCAATGATAGCAGCTGTTTATTAAAGACTACAAAAAAGAAA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46800886 304 - 99891981 aaaTGCaagtttttatcactttgtgagtgtagccaagttggaggagaaatagacaataataaaagagcactgaataacgagggtgagtggctgattaggctcggttgctagctaagtggctTCTAAAAAATTCATTAGTAAAGTTATAGCTCTGGGGACAGTCATGCAGTCAAAGAATGGATGGTAAATTCATTACAAAGGCCCATGGTCTTTCTTCACATGCCTTCTAGTGGAAAATTCCTAAGTGCCTAAATAGCAAGTCTGCAACGATAGCAGCTGTTTATTAAAGACTACAAAAAAGAAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55106601 300 + 185818997 aaaTGCAAGTTTGTATCCCTTTGTGAGTGTAGCCAAGTTGGAGGAGAAATAGACAAGAACAAAAGAGCACTGAATAAGGAGGGTGAGTGGCTGGTTAGGCTTGGTTGCTAGTTAAGTGGTTTCTAAAGAATTCATTAGTAAAGTTACAGCTCTGGGGACAGTCATG----CAAAGAATGAATGCTAAATTCATTACAAATACCCATGATCTTTCTTTACATGCCTTCTAGTGAAAAGTTCCTAAGTGCCTAAATAGCAAGTCTGCAACAATAGCAGCTGTTTGCTAAAGACTACGAAAAAGAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127698848 300 - 192294377 aaaTGCAAGTTTGTATCCCTTTGTGAGTGTAGCCAAGTTGGAGGAGAAATAGACAAGAACAAAAGAGCACTGAATAAGGAGGGTGAGTGGCTGGTTAGGCTTGGTTGCTAGTTAAGTGGTTTGTAAAGAATTCATTAGTAAAGTTACAGCTCTGGGGACAGTCATG----CAAAGAATGAATGCTAAATTCATTACAAATACCCATGATCTTTCTTTACATGCCTTCTAGTGAAAAATTCCTAAGTGCCTAAATAGCAAGTCTGCAACAATAGCAGCTGTTTGCTAAAGACTACGAAAAAGAAA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 44305 304 - 113584 aaaTGCaagtttgtatcactttgtgagtgtagccaagttggaggagaaataggcaagaacaaaacagcactgaataaggagggtgagtggctggttaggctcagttgctagctaagtggctTCTAAAAACTTCATTAGTAAAGTTACAGCTCTGGGGACAGTCATGTAGTCAAACAATGAATGCTAAATTCATTACAAATACCCATGGTCTTTCTTCACATGCATTCTAGTGAAAAATTTCTAAGTGCCTAAATAGCAAGTCTGCAAAGATAGCAGCTGTTTATTAAAGACTACAGAAAAGAAA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124155686 298 - 127223203 aaaTGCAAGTTTATATCCCTTTGTGAGTGTAGCCAAGTTGGAGGAGAA--AGACAAGAACAAAAGAGCACTGAATAACCAGGGTGAGTGGCTGGTTAGGCTCGGTTGCTAGCTAAGTGGTTTCTAAAGAATTCATTAGTAAAGTTACAGCTCTGGGGACAGTCATG----CAAAGAATGAATGCTAAATTCATTACAAATGCCCATGATCTTTCTTTACATGCCTTCTAGTGAAAAGTTCCTAAGTATCTAAACAGCAAGTCTGCAACAATAGCAGCTGTTTGTTAAAGACTACGAAAAAGAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 47885 300 - 148006 aaaTGCaagtttgtatccctttgtgagtgtagccaagttggaggagaaatagacaagaacaaaagagcactgaataaggagggtgagtggctggttaggcttggttgctagctaagtgGTTTCTAAAGAATTCATTAGTAAAGTTACAGCTCTGGGGACAGTCACG----CAAAGAATGAATGCTAAATTCATTACAAATACCCATGATCTTTCTTTACATGACTTCTAGCGAAAAGTTCCTAAGTACCTAAACAGCAAGTCTGCAACAATAGCAGCTGTTTGCTAAAGACTACGAAAAAGAAA i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 764685 304 + 1536524 aaatacaagtttttatcactttgtgagtatagccaagtttgaggagaaatagacaagaaaaaaagagcactgaacaatgagagtaagtggctggttaggcccagttgctagctaagtggctTCTGAAAAATTCATTAGTAAAGTTACAGCTCTAGGGACAGTCATGCAGTCAAAGAATGAATGCTAAATACATTATAAATGCCGACGGTCTTTCCTTACACGCCTTCTAGTGAAAAATTCCTAAGTGCCTAAATAGCAAGTCTGCAATGATAGCAGCTGTTTATTAAAGACTACAAAAAAGAAA i colAng1.NW_012116633v1 I 3278 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1425200 23395 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e macNem1.NW_012013022v1 8951995 3103 - 10413719 I a score=394383.000000 s hg38.chr3_KI270784v1_alt 30177 90 + 184404 TGGAggccgggcgtggttgttcacatctgtactccttgaattttgggaggctgaggcaggcagattgcctgaggtcaggagctc--cagagg s panTro5.chr1 222313873 90 + 228573443 TGGAggccgggcgtggttgctcacatctgtactccttgaattttgggaggctgaggcaggcagactgcccgaggtcaggagctc--cagagg i panTro5.chr1 C 0 C 0 s panPan2.chr7 56727366 90 + 162613886 TGGAggctgggcatggtggctcatgcctgtaatccctgcactttgggaggctgaggtgggcagatcacctgaggtcaggagttt--gagacc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4230188 90 + 4392246 TGGAggccgggcgtggttgctcacatctgtactccttgaattttgggaggctgaggcaggcagattgcctgaggtcaggagctc--cagagg i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46801190 90 - 99891981 TGGAGTCCCAGAgtggtggctcatgtctgtaatccctgcactttgggaggctgaggcaggcagatcacttgaattcaggagttc--gagaag i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55106901 90 + 185818997 TGGAggccggccatggtggttcacatctgcaatccctgcactttgggaggctgaggcaggcagatcaactgaggtcaggagtcc--gagaga i rheMac8.chr3 C 0 I 2 s macFas5.chr3 127699148 90 - 192294377 TGGAggccggccatggtggttcacatctgcaatccctgcactttgggaggctgaggcaggcagatcaactgaggtcaggagtcc--gagaga i macFas5.chr3 C 0 I 2 s cerAty1.NW_012005081v1 44609 90 - 113584 TGGAggccgggcatgttgactcacgtctctaatccctgcactttgggaggctgaggcaggcagatcacctgaggtcaggagctt--gaggca i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124155984 90 - 127223203 TGGAggccggccatggtggctcacatctgcaatccctgcacttttggaggctgaggcaggcagatcacctgaggtcaggagtcc--aagatg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 48185 92 - 148006 TGGAggccggccatggtggctcacatctgcaatccctgcactttgggaggctgaggcaggcagatcacctgaggtcaggagtcccagagacg i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 764989 90 + 1536524 TGGAggctgagcatggtggctcatgcctgtaatccttgaactttgggaggctgaggctggcagatcacgtgaggtcaggagttc--gagacc i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1448595 90 + 204313951 TCTCAgccaggtacagtggcttatacctttaatccaagcactttgggagtccaaggcaggcaaataaccagaggtcaggagttc--aagaac i calJac3.chr2 I 23395 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e saiBol1.JH378167 173844 0 + 13147851 C e macNem1.NW_012013022v1 8951995 3103 - 10413719 I a score=1157622.000000 s hg38.chr3_KI270784v1_alt 30267 189 + 184404 agcctggccaacatggtgaaatcccatctctactaaaaatacaaaaattagctgggtatggtggcgggcacctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccagaaggtgaaggttgcagtgagccaaaatcgcaccattgcactccagcctgggtgacaagagaaagac s panTro5.chr1 222313963 189 + 228573443 agcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggtatggtggcgggcgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacccagaaggtgaaggttgcagtgagccaaaatcgcaccattgcactccagcctgggtgacaagagaaagac i panTro5.chr1 C 0 C 0 s panPan2.chr7 56727456 187 + 162613886 agcctggccaacacggtgaaaccctatctctactaaaaatacaaaaattagatgggtgtggtggcgggcacctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacccagaaggcagaggttgcagtgagccaaaatcacgccattgca--ccagcctgggcgacaaaagcaagac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4230278 188 + 4392246 agcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagct-ggtatggtggcgggcgcctgtaatctcagctactcgggaggctgaggcaggagaattgcttgaacccagaaggtgaaggttgcagtgagccaaaatcgcaccattgcactccagcctgggtgacaagagaaagac i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46801280 182 - 99891981 agcctggccaacatggtgaaaccccatctctact--aaatacaaaaatcatctgggca-----gtgggcacctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacccagaaggcaagggttgcagtgagccaaaatcgcaccattgcactccaggctgggcgacaagagcaagac i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55106993 189 + 185818997 agcctggccaacatggtgaaaccccgtctctactacaaatacaaaaattagctgggtgtggtggcgggcacccataatcccagctactcgggaggctgaggcaggagaactgcttgaacccagaaggcaagggttacagtgagctaaaatcgcaccattgcactccagcctgggcgacaagagcaagac i rheMac8.chr3 I 2 C 0 s macFas5.chr3 127699240 189 - 192294377 agcctggccaacatggtgaaaccccgtctctactacaaatacaaaaattagctgggtgtggtggcgggcacccataatcccagctactcgggaggctgaggcaggagaactgcttgaacccagaaggcaagggttacagtgagctaaaatcgcaccattgcactccagcctgggcgacaagagcaagac i macFas5.chr3 I 2 C 0 s macNem1.NW_012013022v1 8955098 188 - 10413719 agcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagatgggtgtggtggcgggcgcct-taatctcagctactcaggaggctgaggcctgagaattgcttgaacccagaaggcggaggttgcagtgaggcaaaatcgcgccattgcactccagcctgggcgacaaaagcaagac i macNem1.NW_012013022v1 I 3103 I 21 s cerAty1.NW_012005081v1 44699 189 - 113584 agcctggccaacatggtgaaaccctgtctccactaaaaatacaaaaattagcagggtgtggtggcaggtgcctgcaatttcagctatttgggaggctgaggcaggagaattgcctgaacccagaaggcaaaggttgcagccagccaaaatcgcaccattgcactccagcctaggtgacaacagcaagac i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124156074 189 - 127223203 agcctggccaacatggtgaaactgtgtctctactaaaaatacaaaaattagctgggtgtggtggcgggcacccataatcccagctactcgggaggctgaggcaggagaactgcttgaacccagaaggcaagggttacagtgagctaaaatcgcatcattgcactccagcctgggcgacaagagcaagac i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 48277 189 - 148006 agcctggccaacatagtgaaaccccgtctctactaaaaatacaaaaatcagctgggtgtggtggcgggcacccataatcccagctacttgggaggctgaggcaggagaactgcttcaacccagaaggcaagggttacagtgagctaaaattgcaccactgcactccagcctgggcgacaagagcaagac i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 765079 188 + 1536524 agcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagatgggtgtggtggcagacgcct-taatcccagctactcaggaggctgaggcatgagaattgcttgaacccagaaggcggaggttgcagtgaggcaaaatcacgccattgcactccagcctgggcgacaaaagcaagac i colAng1.NW_012116633v1 C 0 I 17 s calJac3.chr2 1448685 189 + 204313951 atcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagctgggcatggtggcacacacctgtaatcccagctactccagaggctgaggcaggagaatcgcttgaacccaggaggcagaatttgcagtgaccagagatcatgccattgtactccaggatgggcaacaagagcaaaac i calJac3.chr2 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e saiBol1.JH378167 173844 0 + 13147851 C a score=38786.000000 s hg38.chr3_KI270784v1_alt 30456 27 + 184404 tcttatcttaaaa---aaaaaaa---gaaaaaa s panTro5.chr1 222314152 30 + 228573443 tcttatcttaaaa---aaaaaaaaaagaaagaa i panTro5.chr1 C 0 C 0 s panPan2.chr7 56727643 21 + 162613886 ac-catctttaaa---aaataaa--------aa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4230466 26 + 4392246 tcttatcttaaaa---aaaaaaa----aaaaaa i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46801462 22 - 99891981 tc-catcttaaaa---aaaaaaa-------aaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55107182 27 + 185818997 tc-tatcttaaac--aaaaaaaa---agaaaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127699429 27 - 192294377 tc-tatcttaaac--aaaaaaaa---agaaaaa i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 44888 22 - 113584 tc-tatctt-------aaaaaaa---aaaaaaa i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124156263 29 - 127223203 tc-tatcttaaacaaaaaaaaaa---agaaaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 48466 26 - 148006 tc-tatcttaaac---aaaaaaa---agaaaaa i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 765284 13 + 1536524 tt-tttttt-------AAAAA------------ i colAng1.NW_012116633v1 I 17 C 0 s calJac3.chr2 1448874 26 + 204313951 tc-catctcagaa---aaaaaat---aaaataa i calJac3.chr2 C 0 T 22649 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e saiBol1.JH378167 173844 0 + 13147851 C e macNem1.NW_012013022v1 8955286 21 - 10413719 I a score=27613.000000 s hg38.chr3_KI270784v1_alt 30483 8 + 184404 aagaaaTG s panTro5.chr1 222314182 8 + 228573443 aagaaaTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56727664 8 + 162613886 taaaaaaG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4230492 8 + 4392246 aagaaaTG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46801484 8 - 99891981 aaaaaaTG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55107209 8 + 185818997 aagaaaTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127699456 8 - 192294377 aagaaaTG i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 44910 8 - 113584 aagaaaTG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124156292 8 - 127223203 aagaaaTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 48492 8 - 148006 aagaaaTG i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1448900 22649 + 204313951 T e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 765297 0 + 1536524 C e macNem1.NW_012013022v1 8955286 21 - 10413719 I a score=1652851.000000 s hg38.chr3_KI270784v1_alt 30491 323 + 184404 GCATCTTCTTCAAGAATTACATCGTGTTTCATGATAAAGAAGCTCTAATTTTGCATTTGTTCAAGTATTGATGAGATTTACCCAATATGACACCCATCTTGGATAAAATGCAAACAACACAATTTCATTTTCTCATTAA-CAAAACCGATTAAGTAGTCTaatataaattgcgatcttatt-aaaaactgatccgatttaaaaaattatggaattatggagccaataagatgttacaacctgttccaagggaaattccaaaatccacacatatctgagaccatcaagtatgatgaaatatatttgATTACTATATTGAAAAATAA s panTro5.chr1 222314190 323 + 228573443 GCATCTTCTTCAAGAATTACATCGTGTTTCATGATAAAGAAGTTCTAATTTTGCATTTGTTCAAGTATTGATGAGATTTAGCCAATATGACACCCATCTTGGATAAAATGCAAACAACACAATTTCATTTTCTCATTAA-CAAAACCGATTAAGTAGTCTAATATAAATTCTGATCTTATT-AAAAACTGATCAGATTTAAAAAATTATGGaattatggagccaataagatgttacaacctgttccaaggggaattccaaaatccacacatatctgagaccatcaagtatgacgaaatatatttgATTACTATATTGAAAAATAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 56727672 322 + 162613886 GCATCTTCTTCAAGAATGACATAGTGTTTCATGATAAAGAAGCCCTAATTTTGCATTTGTTCAAGTATTGATTTGATTTAGCAAATATGACACCAATCTTGGATAAAGTGCGAACA--ACAATTTCATTTTCTCCTTAATCAAAACTGATTAGGTAGTCTAATACCAATTCTGATCTTATT-AAAAACTGATAAGATTAAAAAAATTAGGGaatgatggagccaataagatgttacaacctgttctaaggagaattccaaaacccacacatatttgagaccattaagcatgatgaaatatatctgATTACTATATTTAAAAATAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4230500 322 + 4392246 GCATCTTCTTCAAGAATTACATCGTGTTTCATGATAAAGAAGCTCTAATTTTGCATTTGTTCAAGTATTGATGAGATTTAGCCAATATGACACCCATCTTGGATAAAATGCAAACAACACAATTTCATTTTCTCATTAA-CAAAACCGATTAAGTAGTCTAATATCAATTCTGATCTTATT-AAAAACTGATCAGATT-AAAAAATTATGGaattatggagccaataagatgttacaacctgttccaaggggaattccaaaatccacacatatctgagaccatcaagtatgatgaaatatatttgATTACTATATTGAAAAATAA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46801492 322 - 99891981 GCATCTTCTTAAAGAATGACATCGTGTTTCATGATAAAGAAGCTCTAATTTTGCGTTTGTTCAAGTATTGATTAGATTTAGCCAATATGACATCAATCTTGGATAAGGTGCAAACAACACAGTTTCATTTTCTTATTAA---AAACTGATTAGGTAGTCTAATATCAATTCTGACCTTATTAAAAAACTGATCAGATTAAAAAAATTATGGaatgatggagccaataagatgttacaacctgttccaaggggaattccaaaacccacacatatttgagaccatcaaacatgatgaaatatatttgATTACTATATTGAAAAATAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55107217 321 + 185818997 GCATCTTCTTCAAGAATGACATAGTTTTTCATGATA---AAGCTCTAATTTTGCATTTGTTCAAGTATTGATTAGAATTACCCAATATGACACCAATCTTGGATAAAGTGCAAACAACATAATTTCATTTTCTCAATAATCAAAACTGACGAGGTAGTCTAATATCAATTCTGATCTTATt-aaacacggatcagattttaaaaataatggaatgatggagcaaataagatgttacaacctgttccaaggggaattccaaaacccacacatatctgagaccatcaagtatgatgaaatatatttgATTACTATACTGAAAAATAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127699464 321 - 192294377 GCATCTTCTTCAAGAATGACATAGTTTTTCATGATA---AAGCTCTAATTTTGCATTTGTTCAAGTATTGATTAGAATTACCCAATATGACACCAATCTTGGATAAAGTGCAAACAACATAATTTCATTTTCTCAATAATCAAAACTGACGAGGTAGTCTAATATCAATTCTGATCTTATT-AAACACGGATCAGATTTTAAAAATAATGGaatgatggagcaaataagatgttacaacctgttccaaggggaattccaaaacccacacatatctgagaccatcaagtatgatgaaatatatttgATTACTATACTGAAAAATAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8955307 323 - 10413719 GCATCTTTTTCAAGAATGACATAGTGTTTCATGATAAAGAAGCCTTAATTTTGCATTTGTTCAAGTATTGATTCGATTTAGCAAATATGACAACAGACTTGGATAAAGTGCAAACAACACAATTTCATTTTCTCCTTAATCAAAACTGATTAGGTAGTCTAATATCAATTCTGATCTTATT-AAAAACTGATAAGA-TAAAAAAATTAGGGaatgatggagccaataagatgttacaacctgttccaaggagaattccaaaacccacacatatctgagaccattaagtatgatgaaatatatttgATTACTATATTTAAAAATAA i macNem1.NW_012013022v1 I 21 C 0 s cerAty1.NW_012005081v1 44918 313 - 113584 GCATCTTCTTCAAGAATGACATAGTATTTCATGATA---AAGCTCTAATTTTGCATTTGTTCAAGTATTGATTAGATTTACCCAACATGACACCAATCTTGGATAAAGTGCAAACAACACAATTTCATTTTCTCAATAATCACAACTGACTAGGTAGTCTAATATCAATTCTGATCTTATT-CAAAACTGATCAGA-TTAAAAAATTATGGaatgatggagcaaataagatgttacaacctgttccaaggggaattccaaaatccacacatatctgagacc-------atgatgaaatatatttAATTACTATATTGAAAAATAA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124156300 321 - 127223203 GCATCTTCTTCAAGAATGACATAGTTTTTCATGATA---AAGCTCTAATTTTGCATTTGTTCAAGTATTGATTAGAATTACCCAATATGACACCAATCTTGGATAAAGTGCAAACAACACAATTTCATTTTCTCAATAATCAAAACTGACGAGGCAGTCTAATATCAATTCTGATCTTATt-aaacacggatcagattttaaaaataatggaatgatggagcaaataagatgttacaacctgttccaaggggaattccaaaacccacgcatatctgagaccatcaagtatgatgaaatatatttgATTACTATACTGAAAAATAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 48500 321 - 148006 GCATCTTCTTCAAGAATGACATAGTTTTTCATGATA---AAGCTCTAATTTTGCATTTGTTCAAGTATTGATTAGAATTACCCAATATGACACCAATCTTGGATAAAGTACAAACAACACAATTTCATTTTCTCAATAATCAAAACTGACTAGGTAGTCTAATATCAATTCTGATCTTATT-AAACAATGATCAGATTTTAAAAATTATGGaatgatggagcaaataagatgttacaacctgttccaaggggaattccaaaacccacgcatatctgagaccatcaagtatgatgaaatatatttgATTACTATACTGAAAAATAA i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 765297 323 + 1536524 GCATCTTTTTCAAGAATGACATAGTGTTTCATGATAAAGAAGCCTTAATTTTGCATTTGGTCAAGTATTGATTCGATTTAGCAAATATGACAACAGACCTGGATAAAGTGCGAACAACACAATTTCATTTTCTCCTTAATCAAAACTGATTAGATAGTCTAACATCAATTCTGATCTTATT-GAAAACTGATAAGG-TAAAAAAATTAGGGaatgatggagccaataagatgttgcaacctgttccaaggagaattccaaaacccacacatatctgagaccatcaagtatgatgaaatatatttgATGACTATATTTAAAAATAA i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1448900 22649 + 204313951 T e saiBol1.JH378167 173844 0 + 13147851 C a score=1216140.000000 s hg38.chr3_KI270784v1_alt 30814 213 + 184404 ACTGATTACATAGC---CAACAATTGGACAGGGGTCTCCTCATCCACAGCCACACAAACCCGATCATGCAGCTGTATGGTTACAAGGCCTACATAGCCTAGAAGGGACTGGTCTGACTTGAGAT--------------TTCAtttgtatttgtattttgagacagggtcccactctgtcacccaggatggagtgcagtggtataatcatagctcactgcaaccttgacca s panTro5.chr1 222314513 213 + 228573443 ACTGATTACATAGC---CAACAATTGGACAGGGGTCTCCTCATCCACAGCCACACAAACCCGATCATGCAGCTATATGGTTACAAGGCCTACATAGCCTAGAAGGGACTGGTCTGACTTGAGAT--------------TTCAtttgtatttgtattttgagacagggtcccattctgtcacccaggatggagtgcagtggtataatcatagctcactgcaaccttgacca i panTro5.chr1 C 0 C 0 s panPan2.chr7 56727994 221 + 162613886 ACTGATTATATAGCCAACAACAATTGGGCAGGGGTCTCCTCATCCACAGCCACACAATCCTGATCACGCAGCTATGTGGTTGCAAGGCCTGCGTAGCCTAGAAGGGACTGGTCTGACTTGAGATTTCA---------CTTCATTCATAtttgtattttgagacagggtcctgctctgtcacccaggctggagtgcagtggtataatcatagctcactgcagccttgaccA i panPan2.chr7 C 0 I 22 s gorGor5.CYUI01015383v1 4230822 213 + 4392246 ACTGATTACATAGC---CAACAATTGGACAGGGGTCTCCTCATCCACAGCCACACAAACCCGATCATGCAGCTATGTGGTTACAAGGCCTACATAGCCTAGAAGGGACTGGTCTGACTTGAGAT--------------TTCAtttgtatttgtattttgagacagggtcccactctgtcacccaggatggagtgcagtggtataatcatagctcactgcaaccttgacca i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46801814 221 - 99891981 ACTGATTATATAGCCAATAACAATTGGACAGGGGTCTCCTCATCCACAGCCACACAAACCCGATCATGCAGCTATGTGGTTGCAAGGCCTACATAGCCTAGAAGGGACTGGTCTGACTTGAGATTTCG---------TTTCAtttgtatttgtattttgagacagggtcccactctgtcacccaggatggagtgcaatggtataatcatagctcactgcagccttgacca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55107538 220 + 185818997 ACTGATTATAAAGCCAACAACAATTGGGCAGGGGTCTCCT-ATCCACAGCCACACAAACCCGATCATGCCACTATGTGGTTGCAAGGCCTACATAGCCTAGAAGGGACTGGTCTGACTTGGGAtttca---------tttcatttgtatttatattttgagacagggtcccactgtgtcacccaggatggagtgcagtggtataatcatagctcactgcagccttgacca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127699785 220 - 192294377 ACTGATTATAAAGCCAACAACAATTGGGCAGGGGTCTCCT-ATCCACAGCCACACAAACCCGATCATGCCACTATGTGGTTGCAAGGCCTACATAGCCTAGAAGGGACTGGTCTGACTTGGGATTTCA---------TTTCATTTGTATTTATAttttgagacagggtcccactgtgtcacccaggatggagtgcagtggtataatcatagctcactgcagccttgacca i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8955630 212 - 10413719 ACTGATTATATAGCCAATAACAATTGGGCAGGGGTCTCCTCATCCACAGCCACACA---------ATGCGGCTCTGCGGTTGCAAGGCCTGCATAGCCTAGAAGGGACTGCTCTGACTTAAAatttca---------cttcattcatatttgtattttgagacagggtcctgctctgtcacccaggctggagtgcagtggtataatcatagatcactacagctttgacca i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 45231 210 - 113584 ACTGATTACATAGCCAACGACAATCAGGCAGGGGTCTCCTCATCCATAGCCACACAAACCCGATCATGCCACTATGTGGTTACAAGGCCTACATAGCCTAGAAGGGACTGGTCTGACTTGAGAtttc--------------------atttgcattttgagacagcatcccactgtgtcacccaggatggagtgcagtggtataatcatagctcattgtagtcttgatca i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124156621 220 - 127223203 ACTGATTATAAAGCCAACAACAATTGGGCAGGGGTCTCCT-ATCCACAGCCACACAAACCCGATTATGCCACTATGTGGTTGCAAGGCCTACATAGCCTAGAAGGAACTGGTCTGACGTGGGatttca---------tttcatttgtatctatattttgagacagggtcccactgtgtcacccaggatggagtgcagtggtataatcatagctcactgcagccttgacca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 48821 221 - 148006 ACTGATTATAAAGCCAACAACAGTTGGGCAGGGGTCTCCTCATCCACAGCCACACAAACCCGATCATGCAGCTATGTGGTTGCAAGGCCTACATAGCCTAGAAGGGACTGGTCTGACTTGGGatttca---------tttcatttgtatttatattttgagacagggtcccactgtgtcacccaggatggagtgcagtggtataatcatagctcactgcagccttgacca i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 765620 198 + 1536524 ACTGATTATATAGCCA---ACAATTGGGCAGGGGTCTCCTCATCCACAGCCACACAAACCCGATCATGCC--------------------ACATAGCCTAGAAAGGACTGGTCTGACTTGAGATTTCA---------TTTCATTTGTAAttctattttgagacagggtcccactgtgtcacccaggatggagtccagtggtataatcatagctcactgcagctttgacca i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1426251 221 + 204313951 ACTGATTAGTCAGGGAACAACA-CTGGGCAGGGGTCTCCTCATTCCCAGTGACAAAAACCCCACTGCACCACTCCGGGGTTGCAAGGGCTGCAGAGCCAAAAG------GCTCTGACTTGAGATTTCATTATTTTTCTTGTAtttctatttgtattgtgagacaaggtcctgc--tgtcacccaggctggagtgcagttgtgcacttatagctcactgcagcctcaacct i calJac3.chr2 T 22649 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e saiBol1.JH378167 173844 0 + 13147851 C a score=1641924.000000 s hg38.chr3_KI270784v1_alt 31027 366 + 184404 actgggctcaagagatgctcctgcctcagctgcccccatacctgggaatacaggcaagtaccaccatgtcaggc----atttttttc------------atttttg--tagagagagaagacttgctatgttgcccaagctggcctcaaactcctagaatc-aagagatctgcccatctcagccacatgagtaactggggccataggtacataccatcatgcctggcTATATTTATTTTCTTTTATTAAATTTATttttttta-----tttttgtagagaggag--gtcttgctgtgttgcccaggctgctctcaaactcatggccttaaaacatactcccatctctgcctctcaaactgttggaactataggtgtgagccactgtacctgg s panTro5.chr1 222314726 364 + 228573443 actgggctcaagagatgctcctgcctcagccgcccccatacctgggaatacaggcaagtaccaccatgtcaggc----acttttttc------------atttttg--tagagagagaagacttgctatgttgcccaagctggcctcaaactcctagaatc-aagagatctgcccatctcagccacatgagtaactggggccataggtacataccatcatgcctggcTACATTTATTTTATTTTTTTAA-TTTAttttttt-a-----tttttgtagagaggag--gtcttgctgtgttgcccaggctgctctcaaactcgtggccttaaaacatactcccatctctgcctctcaaactgttggaactataggtgtgagccactgtacctgg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4231035 361 + 4392246 actgggctcaagagatgctcctgcctcagctgcccccatacctgggaatacaggcaagtaccaccatgtcaggc----atttttttc------------atttttg--tagagagagaagtcttgctatgttgcccaagctggcctcaaactcctagaatc-aagagatctgcccatctcagccacatgagtaactggggccataggtacataccatcatgcctggcTATATTTATTTTA-----TTAAATTTATttttttta-----tttttgtagagaggag--gtcttgctgtgttgcccaggctgctctcaaactcatggccttaaaacatactcccatctctgcctctcaaactgttggaactataggtgtgagccactgcacctgg i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46802035 357 - 99891981 actgggcttaagagatgctcctgcctcagccgacccaatacctgggaatatgggcaagtactaccatgtcaggc----atttttttt----ttttttcaatttttg--tag-------agtcttgatatgttgcccaagctggcctcaaactcctagaatcaaagagatctgcccatctcagcctcctgagtaactggggccataggtaca---catcatgcctggcTATATTTATTTTA-----TTAAAtttatttctttta-----tttttgtaga---gcg--gtcttgctatgttacccaggctgctctcaaactcatggccttaaaacatactcccatctctgcctctcaaactgttggaactataggtgtgagacactgcacctgg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55107758 363 + 185818997 agtgggctcaagagatgctcctgcttcagctgccccaatacctggaaatacaggcaagtaccaccatgtcaggc----ttttaaaaa---ttattattaatttttt--tagagagagaagtcttaatatgtggcccaagctggcctcaaactcctagcctc-aagagatctgcccacctcaacctccTGAG------------TAGGTACACACCACCATTCCCGGCTATATTTATTTTATTTTATTAAATTTCTTTCtttta-----tttttgtagagaggag--gccttgctacgttgcccaggctgctctcaaactcatggccttaaaacacactcccatctctgcctctcaaactgttggaactataggtgtgagccactgcccctgg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127700005 363 - 192294377 agtgggctcaagagatgctcctgcttcagctgccccaatacctggaaatacaggcaagtaccaccatgtcaggc----ttttaaaaa---ttattattaatttttt--tagagagagaagtcttaatatgtggcccaagctggcctcaaactcctagcctc-aagagatctgcccacctcaacctccTGAG------------TAGGTACACACCACCATTCCCGGCTATATTTATTTTATTTTATTAAATTTCTTTCtttta-----tttttgtagagaggag--gccttgctacgttgcccaggctgctctcaaactcatggccttaaaacatactcccatctctgcctctcaaactgttggaactataggtgtgagccactgcccctgg i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8955842 360 - 10413719 actaggctcaagagatcatcctgcctcagctgcaccagtacctgggaatacaggcaagtatcaccatatcaggc----ttttaaaaa-----------aatttttttatagagagagaagtcttgctatg-------agctggcctcaaactcctagcctc-aagagatctgcccacctcagcctcctgagtaactggggccataggtacacactaccatgcccagctatatttattttattttattaaatttCttt-tttca-----tttttgtagagaggag--gtcttgctatgttg-caaggctgttctcgaactcatggccttgaaacatacgcccatctctgcctctcaaactgttggaactataagtgtgagccactgcacctgg i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 45441 365 - 113584 actgggctcaagagatgttcctgcctcagccgccccaatacctgggaatacaggcaagtaccaccatgtcaggc----tttttaaaa----------caatttttt-gcagagagagaagtcttgctatgttgcccaagccggcctcaaactcctagcctc-aagagatctacccacctcagcctcctgagtaactggggccatgggtacacatcaccatgcccggcTATATTTATTTTATTTTATTAAATTTC----tttta-----tttttgtagagaggag--gtcttgctatgttgcccaggctgctctcaaactcatggccttaaaacatactcccatctctgcctctcaaactgttggaactataggtgtgagccactgACACTGA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124156841 363 - 127223203 actgggctcaagagatgctcctgcttcagctgccccaatacctggaaatacaggcaagtaccaccatgtcaggc----tttttaaaa---ttattattaatttttt--tagagagagaagtcttaatatgtggcccaagctggcctcaaactcctagcctc-aagagatctgcccacctcagcctcctgag------------taggtatacaccaccatgcccggctatatttattttattttattaaatttCTTTCtttta-----tttttgtagagaggag--gtcttactatgttgcccaggctgctctcaaactcatggccttaaaacatactcccatctctgcctctcaaactgttggaactataggtgtgagctactgcccctgg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 49042 363 - 148006 actgggctcaagagatgctcctgcttcagctgccccaatacctggaaatacaggcaagtaccaccatgtcaggc----ttttaaaaa---ttattattaatttttt--gagagagagaagtcttaatatgtggcccaagctggcctcaaactcctagcctc-aagagatctgcccacctcagcctcctgag------------taggaacacaccaccattcccggctatatttattttattttattaaatttCTTTCtttta-----tttttgtagagaggag--gccttgctatgttgcccaggctgctctcaaactcatggccttaaaacatactcccatctctgcctctcaaactgttggaactataggtgtgagccactgcccctgg i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 765818 370 + 1536524 actaggctcaagagatcatcctgcctcagctgcaccagtacctgggaatacaggcaagtatcaccatatcaggc----ttttttttttttttttttttaattttta--tagagagagaagtcttgctatg-------agctggcctcaaactcctagcctc-aagagatctgcccacctcagcctcctgagtaactggggccataggtacacaccaccatgctcagATATATTTATTTTATTTTATTAAATTTCTttttttca-----tttttgtagagaggag--gtcttgctatgttg-caaggctgttctcgaactcatggccttaaaatatacacccatctctgcctctcaaactgttggaactataggtgtgagctactgcccctgg i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1426472 368 + 204313951 tgtgggatcaagccatcttcctgcctcagct-ccccagtg-ctggtcctatagttgagtgccaccatacctggctatttttttaaaa-----------attttttg--tagagtgaggagtcttgctatgttgcccattttggcttcaaactcctgacctc-aagacatctgctcacctcaacctcctgagtagctgggactacaaatacacatcaccatgcctagcT-TATTTATTTTATTTTCTTTAAT-------TTTGAAAAATAttttgtagaggggaaatatattcttatgttgcccaggctgttctcaaactcctgcttttaaacggtactcccatctctgctttccaaacagctgggactacaggcataagccactgcacTGCG i calJac3.chr2 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e saiBol1.JH378167 173844 0 + 13147851 C e panPan2.chr7 56728215 22 + 162613886 I a score=3575386.000000 s hg38.chr3_KI270784v1_alt 31393 650 + 184404 ccTGACTTGGGA-TTTCTTTTATCTA-GCATCCTTTACTTGGTAGGATTGGGAAAAGCAGTAGTGTTTTTTAAAATTACTTAATAATTCAATCAGAATCAAACtcaaccttgaccactgccttctctcacagctcacatccagtctgtcaggaaatcctactgactgacttcaacatgtatccagg-------------------------------------------ctctaaccatctctcaccaccaccatgaaccccg---------------tcaggatcactatcatctcccaccgggatgttgccacagcttggctcccatgcttctacccaaatcttcccatagtctttctcaactcggcagccaggtc-gtgcttttaaatcaggagacggatcatgtcgcctctctgctcagaa------------gc--------------------cctcg---gtggttcccattttagtcagagcaaaagccaaagcc------ccagcaatagcgtcccagggcttacacgatctgtaccgatcccagcccagcaactccctggcctcctcgctgacttcgctcc----atctctttgctccactggcctccttccagagcctcagacacaccagagagtttcctcctaatgcctttatcctgttgactcagcctacaatgctcttccctcagcaccttggccagctccatcacctgcttcaaacttttgctcaatattcacttatgagg s panTro5.chr1 222315090 654 + 228573443 ccTGACTTGAGA-TTTCTTTTATCTA-GCATCCTTTACTTGGTAGGATTGGGAAAGGCAGTAGTGTTTTTTAAAATTACTTAATAATTCAATCAGAATCAAACtcaaccttgaccactgccttctctcacagcccacatccagtctgtcaggaaatcctactgactgacttcaacatgtatccagg-------------------------------------------ctctaaccatctctcaccaccaccgtgaacccgg---------------tcaggatcactatcatctcccaccgggatgttgccacagcttggcccccatgcttctacccaaatcttcccatagtctttctcaacttggcagccaggtt-atgcttttaaatcaggagacagatcatgtcgcctctctgctcagaa------------gc--------------------cctcg---gtggttcccattttagtcagagtaaaagccaaagcc------ccagcaatagcgtcccagggcttacacgatctgtaccgatcccagccctgcaacttcctggcctcctcgctgacttcgctccctctatctctttgctccactggcctccttccagagcctcaaacacaccagagagtttcctcctaatgcctttatcctgttgactcagcctacaatgctcttccctcagcaccttggccagctccatcacctgcttcaaacttttgctcaatattcacttatgagg i panTro5.chr1 C 0 C 0 s panPan2.chr7 56728237 606 + 162613886 CCTGACTTGCGA-TTTCTTTAATCTG-GCATCCTTTACTTGGTAGGATTGGGAAAGGCTGTAGTGTTTTCAAAAATTACTTAATAATTCAATTAGAACCAAACtcaaccttgactcctgccttctctcacagcttacatccagtctgtcaggaaatcctattgactgact------------------------------------------------------------------------------------------------------------------------tcatctcccgcctggatgttgccaaatctcagcccccctgcttctacccaaatcttcccacagtctttctcaactcagcagccagggg-gtgcttttaaatcaggagaaagatcacgatgcttctctgctcagaacccacccccaacac--------------------ccccacccacagttcccatttcagtcagagtaaaagccaaagcc------ccagcaatagcct-ccagggcttacatgatctgtactgatcccagcccagcaactccctggcctcctcgcctgcttcactccctctatctctttgctcctctggcctccttccagagcctcagacacaccagggagtttcctcctaatgcctttatcctgttgactcagcctacggtggtcttccctcagcaccttggccagctccatcacctgcttcaaacttttgctcaattttcacttatgagg i panPan2.chr7 I 22 C 0 s gorGor5.CYUI01015383v1 4231396 654 + 4392246 ccTAACTTGAGA-TTTCTTTTATCTA-GCATCCTTTACTTGGTAGGATTGGGAAAGGCAGTAGTGTTTTTTAAAATTACTTAATAATTCAATCAGAATCAAACtcaaccttgaccactgccttctctcacagctcacatccagtctgtcaggaaatcctactgactgacttcaacatgtatccagg-------------------------------------------ctctgaccatctctcaccaccaccgtgaacccgg---------------tcaggatcactatcatctcccagcgggatgttgccacagcttggcccccatgcttctacccaaatcttcccatagtctttctcaacttggcagccaggtc-gtgcttttaaatcaggagacagatcacgtcgcctctctgctcagaa------------gc--------------------cctcg---gtggttcccattttagtcagagtaaaagccaaagcc------ccagcaatagcgtcccagggcttacacgatctgtaccgatcccagcccagcaactccctggcctcctcgctgacttcgctccctctatctctttgctccactggcctccttccagagcctcagacacaccagagagtttcctcctaatgcctttatcctgttgactcagcctacaatgctcttccctcagcaccttggccagctccatcacctgcttcaaacttttgctcaatattcacttatgagg i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46802392 654 - 99891981 ccTGACTTGAGA-TTTCTTTTATCTA-GCATCCTTTACTTGGTAGGACTGGGAAAGGCAGTAGTGTTTTTAAAAATTACTTAATAATTCAATTAGAATCAAACtcaaccttgacccctgccttctctcaccgctcacatccagtctgtcaggaaatcctactgactgacttcaatatgtatccagg-------------------------------------------ctctgaccatctctcaccaccaccgtgcacccgg---------------tcaggatcaatatcctctcccaccgggatgttgccacagcttggcccccatgcttctacccaaatcttcccacagtctttctcaacttggcagccagggt-gtgcttttaaatcaggagacagatcgtattgcctctctgcacagaa------------cc--------------------tctcg---gtgattcccattttagtcagagtaaaagcgaaagcc------ccagcaacagtgtcccagggcttacacgatctgtaccgatcccagcccagctactccctggcctcctcgccgacttcgctccctctatctctttgctccactggcctccttccagagcctcagacacaccagggaatttcctcctaatgcctttatcctgttgactcagcctacaatgctcttccctcagcactttggccagctccatcatctgcttcaaacttttgctcaatattcacttatgagg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55108121 647 + 185818997 ccTGACTTGGGA-TTTTTTAAATCTA-CATTCCTTTACTTGGTAGGATTGCAAAAGGCAGTAGGGTTTTT-----TTAATCAATAATTTAATTAGAATCAAACtcaaccttgacccctgctttctctcgcagctcacatccagtctgtcaggaaatcctattgactgacttcaacatgaatccatg-------------------------------------------ctctgaccatctctcaccaccactgtgcaccagg---------------tcaggaccactatcatctcgcactgggatgttgccacagcttggcccccatgcttctacacaaatcttcccagagtctttctcaacttggcagccagggc-gtgc-tttaaattaggagacagatcatgtcgcctctctgctcagaa------------cc--------------------cctcg---gtggttcccattttagtcagagtaaaa-ccaaagcc------ccagcaatagcatcccagggcttacgcgatctgtaccaatcccagcccagcaactccctggcctcctcgccaactttgctccctctttctctttgctccactgacctccttccagagcttcagacacaccagggagtttcctcctaatgcctttatcctgttgactcaggctacgatgctcttccttcagcaccttggccagctccatcatctgcttcaaacttttgctcaatattcacttatgagg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127700368 648 - 192294377 ccTGACTTGGGA-TTTTTTAAATCTA-CATTCCTTTACTTGGTAGGATTGCAAAAGGCAGTAGGGTTTTTT----TTAATCAATAATTTAATTAGAATCAAACtcaaccttgactcctgctttctctcgcagctcacatccagtctgtcaggaaatcctattgactgacttcaacatgaatccatg-------------------------------------------ctctgaccatctctcactaccactgtgcaccagg---------------tcaggaccactatcatctcgcactgggatgttgccacagcttggcccccatgcttctacacaaatcttcccagagtctttctcaacttggcagccagggc-gtgc-tttaaattaggagacagatcatgtcgcctctctgctcagaa------------cc--------------------cctcg---gtggttcccattttagtcagagtaaaa-ccaaagcc------ccagcaatagcatcccagggcttacgcgatctgtaccaatcccagcccagcaactccctggcctcctcgccaactttgctccctctttctctttgctccactgacctccttccagagcttcagacacaccagggagtttcctcctaatgcctttatcctgttgactcaggctacgatgctcttccttcagcaccttggccagctccatcatctgcttcaaacttttgctcaatattcacttatgagg i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8956202 609 - 10413719 ccTGACTTGAGA-TTTCTTTAATCTA-GCATCCTTTACTTGGTAGGATTGGGAAAGGCAGCAGTGTTTTTTAAAATTACTTAATAATTCAATTAGAACCAAACtcaaccttgactcctgccttctctcacagctcacatccagtctgtcaggaaatcctattgactgact------------------------------------------------------------------------------------------------------------------------tcatcttccacctgaatattgccacactttagaccccctgcttctacccaaatcttcccacagtctttctcaactcagcagccagggaggtgcttttaaatcaggaaaaagatcacgttgcttctctgctgagaa------------cc--gccccaccccacccccgaccccc---acggttcccatttcggtcagagtaaaagccaaagcc------ccagcaatagcct-ccagtgcttacacgatctgtactgatcccagcccagcaactccctgg-ctcctcccctacttctctttctgtatctctttgcccctctggcctccttccagagcctcagacacaccagggagtttcctcctaatgcctttatcctgttgactcagcctacagtgctcttctctcagcaccttggccagctccatcgcctgcttcaaacttttgctcaattttcacttatgagg i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 45806 651 - 113584 CCTGACTTGGGATTTTTTTTTATCCA-GCATCCTTTACTTGGTAGGATTGGGAAAGGCAGTAGGGTTTTTA----AAAATTAATAATTCAATTAGAATCAAACtcaaccttgacccctgccttctctcacagctcacatccagtctgtcaggaaatcctattgactgacttcaacatgtatccagg-------------------------------------------ctctgaccatctctcactaccaccatgcactcgg---------------tcaggaccactatcatctcccatcggggtgttgccacagcttggcccccatgattctacccaaatcttcccagagtctttctcaacttggcagccagggc-atgcttttaaatcaggagacagatcatgtcgcctctctgctcagaa------------cc--------------------cctcg---gtggttcccattttagtcagagtaaaagccaaagcc------ccagcaatagcatcccagggcttacgtgatctgtactgattccagcccagcaactccctggtctcctcgctgacttcacttcctctatccctttgctccactggcctccttccagagcctcagacacaccagggagtttcctcctaatgcctttatcctgttgactcagcctacaatgctcttccttcagcaccttggccagctccatcacctgcttcaaacttttgctcaatattcacttatgagg i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124157204 649 - 127223203 ccTGACTTGGGA-TTTTTTTAATCTAGCATTCCTTTACTTGGTAGGATTGCGAAAGGCAGTAGGGTTTTTT----T-AATTAATAATTTAATTAGAATCAAACtcaaccttgacccctgccttctctcacagctcacatccagtctgtcaggaaatcctattgactgacttcaacatgcatccagg-------------------------------------------ctctgaccatctctcactaccaccgtgcaccagg---------------tcaggaccactatcatctctcactgggatgttgccacagcttggcccccatgcttctacacaaatcttcccagagtctttctcaacttggcagccagggc-gtgc-tttaaatcaggagacagatcatgtcgcctctctgctcagaa------------cc--------------------cctcg---gtggttcccattttagtcagagtaaaagccaaagcc------ccagcaatagcgtcccagggcttacacgatctgtaccgatcccagcccagcaactccctggcctcctcgccaacttcgctccctctctctctttgctccactgacctccttccagagcttcagacacaccagggagtttccttctaatgcctttatcctgttgactcagcctacagtgctcttccctcagcaccttggccagctccatcatctgcttcaaacttttgctcaatattcacttaggagg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 49405 648 - 148006 ccTGACTTGGGA-TTTTTTTAATCTA-CATTCCTTTACTTGGTAGGACTGCAAAAGGCAATAGGGTTTTTT----TAAATCAATAATTTAATTAGAATCAAACtcaaccttgacccctgctttctctcgcagctcacatccagtctgtcaggaaatcctattgactgacttcaacatgaatccagg-------------------------------------------ctctgagcatctctcaccaccaccgtgcaccagg---------------tcaggaccactatcatctctcactgggatgttgccacagcttggcccccatgcttctacacaaatcttcccagagtctttctcaacttggcagccagggt-gtgc-tttaaatcaggagacagatcatgtcgcctctctgctcagaa------------cc--------------------cctcg---gtggttcccattttagtcagagtaaaa-ccaaagcc------ccagcaatagcatcccagggcttacgcgatctgtaccaatcccagcccagcaactccctggcctccttgccaactttgctccctctctctctttgctccactgacctccttccagagcttcagacacaccagggagtttccttctaatgcctttatcctgttgactcagcctacaatgctcttccttcagcaccttggccagctccatcatctgcttcaaacttttgctcaatattcacttATGAGG i manLeu1.NW_012100344v1 C 0 I 2702 s colAng1.NW_012116633v1 766188 612 + 1536524 ccTGACTTGGGA-TTTTTTTAATCTA-GCATCCTTTACTTGGTAGGATTGGGAAAGGCAGCAGTGTTTTGAAAAATTACTTAATAATTCAATTAGAACAAAACtcaatcttgactcctgccttctctcacagctcacatccattctgtcaggaaatcctattgactgact------------------------------------------------------------------------------------------------------------------------tcatcttccacctggatactgccacactttagcccccctgcttttacccaaatctttccacagtctttttcaactcagcagccaggggggtgcttttaaatcaggaaaaagatcacgttgcttctctgctgagaa------------ctccgccccaccctaccccccaccccc---acggttcccatttcagtcagagtaaaagccaaagcc------ccagcaatagcct-ccagggcttacatgatctgtactgatcccagcccagcacctccctggcctccttgccttcttcactccctctatctctttgcccctctggccttcttccagagcctcagacataccagggagtttcctcctaatgcctttatcctgttgactcagcctacagtgctcttccctcagcaccttggccagctccatcacctgcttcaaacttttgctcaattttcactcatgagg i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1426840 685 + 204313951 CCTAAA--GAGA-TTTCTTTAATCTA-GCATCCCATTCTTGGTAAGATTGGGAAAGGCAGTAGTGTTTTAAAAAATTACTTAATAATTCAATaaaactgaaacctagctttgacccctgc-ttctctcacaccccacatccagtctgtcaggaaatcctattgactgtgttcaccgtgtactgaagatccccacccggcagctccctggcctcctcctctatttctctcctccgaccatctctcaccaccgccgttaccctggtcaggaccactgtcatcaggaccactatcatctcccacc----tgttgtcacagcttggcccccatccttctacccaaatcttcccacagtctttctcaactcagcagccagaga-gtgcttttcaattgagggacagatcatattgcctttctgctcagaa------------cc--------------------ctcct---gcagatcccatc----tctgagtaaaagccaacgcccctctgccagcagtaacctcccagggcttacaggatctctactgatccctgtccagcaactccctggcctcctctccaaagtctctccctctgtcc---tgctccactggcctcccttcagagcctcagacacacc-----------------tgacactattctgtggtttctgcctacaatgctcgtccctcagcaccttggccagctccttcccctccttcaagtctttgct--gttttcacttaggagg i calJac3.chr2 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e saiBol1.JH378167 173844 0 + 13147851 C a score=64118.000000 s hg38.chr3_KI270784v1_alt 32043 13 + 184404 ccaaccctgacca s panTro5.chr1 222315744 13 + 228573443 ccaaccctgacca i panTro5.chr1 C 0 C 0 s panPan2.chr7 56728843 13 + 162613886 ccaaccctgacca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4232050 13 + 4392246 ccaaccctgacca i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46803046 13 - 99891981 ccaaccctgacca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55108768 13 + 185818997 ccaaccctgacca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127701016 13 - 192294377 ccaaccctgacca i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8956811 13 - 10413719 ccaaccctgacca i macNem1.NW_012013022v1 C 0 I 3228 s cerAty1.NW_012005081v1 46457 13 - 113584 ccaaccctgatca i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124157853 13 - 127223203 ccaaccctgacca i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 766800 13 + 1536524 ccaatcctgacca i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1427525 8 + 204313951 ccacccca----- i calJac3.chr2 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e saiBol1.JH378167 173844 0 + 13147851 C e manLeu1.NW_012100344v1 50053 2702 - 148006 I a score=252168.000000 s hg38.chr3_KI270784v1_alt 32056 60 + 184404 ctctacttaacactgccatctgtccccattcccaccatgctcAtttctttctttcttttt------------------- s panTro5.chr1 222315757 60 + 228573443 ctctacttaatactgccatctgtccccattcccaccatgctcAtttctttctttcttttt------------------- i panTro5.chr1 C 0 C 0 s panPan2.chr7 56728856 56 + 162613886 ctctacctaacattgccatctgtccccattcccagcatgctcA----tttctttcttttt------------------- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4232063 60 + 4392246 ctctacttaacactgccatctgtccccattcccaccatgctcAtttctttctttcttttt------------------- i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46803059 60 - 99891981 ctctgcttaacactgccatctgtccccattcccaccatgctcAtttctttctttcttttt------------------- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55108781 60 + 185818997 ctctactcaacattgccatttgtccccattcccatcatgctcAtttctttctttcttttt------------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127701029 60 - 192294377 ctctactcaacattgccatttgtccccattcccatcatgctcAtttctttctttcttttt------------------- i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 46470 60 - 113584 ctctactcaacattgccatttgtccccattcccaccatgctcAtttctttctttcttttt------------------- i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124157866 60 - 127223203 ctctactcaacattgccatttgtccccattcccaccaTGCTCAtttctttctttcttttt------------------- i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 766813 60 + 1536524 ttctacttaacattgccatctgtccccattcccaccatgctcctttctctttttcttttt------------------- i colAng1.NW_012116633v1 C 0 I 3341 s calJac3.chr2 1427533 79 + 204313951 ttctatttaacactaccatctgtgcccattactaccACATTCACTTCTTTCtttctctctttttttttcttttgttttg i calJac3.chr2 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e saiBol1.JH378167 173844 0 + 13147851 C e manLeu1.NW_012100344v1 50053 2702 - 148006 I e macNem1.NW_012013022v1 8956824 3228 - 10413719 I a score=509292.000000 s hg38.chr3_KI270784v1_alt 32116 141 + 184404 gaaacaagatcttgctttattgcccaggctggagtacactggtgcaatcacagctcacagcaacttcaacctcccaggcttaaacaatcctcccgcctc---agccaccctaggaactgagactacagctgcatgccacaacac s panTro5.chr1 222315817 144 + 228573443 gaaacaaggtcttgctttattgcccaggctggagtacactggtgcaatcacagctcacagcaacttcaacctcccaggcttaaacaatcctcctgcctcctcagccaccctaggaactgagactacagctgcatgccacaacac i panTro5.chr1 C 0 C 0 s panPan2.chr7 56728912 141 + 162613886 gagacggggtcttgctctattgcccaggctgaagtacagtggtgcaatcacagctcacagcaacctcaatgccctaggcttaaacaatcctcctgtttc---agcctccctaggagctgagactacaggtgcacgccagaacac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4232123 141 + 4392246 gaaacaaggtcttgctttattgcccaggctggagtacactggtgcaatcacagctcacagcaacttcaacctcccaggcttaaacaatcctcccgcctc---agccaccctaggaactgagactacagctgcatgccacaacac i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46803119 141 - 99891981 gaaacaaggtcttgctctattgcccaggctggagtacagtggtgcaatcacagctcacagcaacttcaacctcccaggcttaaacaattctcccacctc---agcttccctaggaactgagactacagctgcatgccacaacac i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55108841 141 + 185818997 gaaacaaggtcttgctctattgcccaggctggagtacagtggtgcaatcatagctcacagcaacctcaacctcctgggcttaaacaatcctcccgcctc---agcctccctaggaactgagactacagctgcatgcaacaacac i rheMac8.chr3 C 0 I 4 s macFas5.chr3 127701089 141 - 192294377 gaaacaaggtcttgctctattgcccaggctggagtacagtggtgcaatcatagctcacagcaacctcaacctcccgggcttaaacaatcctcccgcctc---agcctccctaggaactgagactacagctgcatgcaacaacac i macFas5.chr3 C 0 I 2688 s cerAty1.NW_012005081v1 46530 141 - 113584 gaaacaaggtcttgctttattgctcaggctgaagtacagtggtgcaatcacagcttacagcaacctcaatctcccaggtttaaacaatcctcccgcctc---agcctccctaggaactgaggctacagctgcatgccacaacac i cerAty1.NW_012005081v1 C 0 I 4 s chlSab2.chr21 124157926 141 - 127223203 gaaacaaggtcttgctctattgcccaggctggagtacagtggtgcaatcatagctcacagcaacctcaacctcccaggcttaaacaatcctcctgcctc---agcctccctaggaactgagactacagctgcatgcaacaacac i chlSab2.chr21 C 0 I 4 s calJac3.chr2 1427612 141 + 204313951 gagagaagatctcactctgtcaccaaggctggagtggagtggtgcaatcacagctcactgcaacctcaaattcccaggctcaagcaatcctcccacctc---agccttcctagtagctgaagctataggtgcatgccatcatgc i calJac3.chr2 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 766873 3341 + 1536524 I e manLeu1.NW_012100344v1 50053 2702 - 148006 I e macNem1.NW_012013022v1 8956824 3228 - 10413719 I a score=2606008.000000 s hg38.chr3_KI270784v1_alt 32257 1006 + 184404 atggct--tttattttttttt------------------tttt----gagacggagt----ctcggtc-----gcccaggctgaagtgtaagggtgcgatcttggctcactgcaatgtctgccttttgggttcaagtgattctct-------gcctcccaagtagctgggattacaggcacccaccaccacacctggctaatgtttgtatttttagtagagatggggtttcaccatcttggctaggctggtct-tgaacttctgacctc--gtgatccaccctcctcggcctcccaaag-tgctgggattacaggcgtgagccactgcgcctggcctttaaaaaaatatttttttt-agacatgaggtctcattatgttgcccaggctggtcttaagctcctgggcttaagcgatcctcccacctcagcctcctaaagttctgggattacaggcgtgagcaactgTAACATGAGGTCCCAGCTTCgtgttcatt-ttttgttgttgctacaacaaagtaccctacatttagtggcatcaaacaccacaaatctaccatcttacagttctgggggccagaagccc-aactaggtctattaaggctaaagtcaaggtgtcagagaggctgcattccttctgggggaggctctagacagaatgtgctcctttgccttttccagcttctagaagccacccccattcct--tgacttacctcg-----------tgactccatattcaaggccagaagtgcagcatcttcaaatctccctctctgacctcttcttccattaccacatcactttctctaattctgactctcctacctca----ttctcttataaagatccttgtgattGGTgggtatgggggctcccatctgtaatcccaacattttgggaggccaaagaggaaggattgcttgaggccaagagtta-gagatcagcctggggaaaataggaaga---tcctgcctttacaaaat--taaaat------cagctggacatggtgatgcatgcctgtagttccagctactggagaggctaaggtgggaggattgctttagcctaggagg s panTro5.chr1 222315961 1016 + 228573443 atggct--ttttttttttttt------------------ttttttttgagacggagt----ctcggtc-----gcccaggctgaagtgtaagggtgcgatcttggctcactgcaatgtctgccttttgggttcaagtgattctct-------gcctcccgagtagctgggattacaggcacccaccaccacacctggctaatgtttgtatttttagtagaaatgcggtttcaccatcttggctaggctggtct-tgaacttctgacctc--gtgatccaccctcctcggcctcccaaag-tgctgggattacaggcgtgagccactgcgtctggccttttaaaaaat-tttttttt-agatatgaggtctcattatgctgcccaggctggtcttaagctcctgggcttaagcgatcctcccacctcagcctcctaaagttctgggattacaggcgtgagcaactgTAACATGAGGTCCCAGCTTCATGTTCAtt-ttttgttgttgctacaacaaagtaccctacatttagtggcatcaaacaccacaaatctaccatcttacagttctgggggccagaagccc-aactaggtctattaaggctaaagtcaaggtgtcagaggggctgcactccttctgggggaggctctagacagaatgtgctcctttgccttttccagcttctagaagccacccccattcct--tgacttacctcg-----------tgactccatattcaaggccagaagtgcagcatcttcaaatctccctctctgacctcttcttccattaccacatcactttctctaattctgactctcctacctcc----ttctcttataaagatccttgtgattGGTgggtatgggggctcccatctgtaatcccaacattttgggaggccaaagaggaaggattgcttgaggccaagagttaagagatcagcctggggaaaataggaaga---ccctgcctttacaaaat--taaaattaaaatcagctggacatggtgatgcacgcctgtagttccagctactggagaggctaaggtgggaggattgctttagcctaggagg i panTro5.chr1 C 0 C 0 s panPan2.chr7 56729053 1018 + 162613886 ctagc----taattttttttt------------------ttgt-----agacagagtcttactctgtc-----acctaggctggagtgcaatggcatgatcttggctcactgaaacctctgcctcccggattcaagtgattctct-gcctcagcctcccaagtagctgggattacaggtgcacaccacctcactgggcttatttttgtatttttagtagagacggggtttcaccatctttgccaggctggtct-tgaactcctgacctc--atgatccacccccctcggcctcccaaag-tgctgggattacaggcgtgaaccaccgtgcctagccttttctttaaa-atttttgt-agacatgaggtctcactatgttgcccaggctggtcttaagctcctgggcttcagcaatcttcccacctcagcctcccaaattgctgggattacaggcgtgagcaactgc---------ccctggcTTCAtgttcatt-tctccttgctgctgcaacaaactaccctacatttagtggcttaaaacatcagaaatctaccatcttacagttctggggcccagaaaccc-agctaggtctagtaaggctaaagtcaaggtgtcagaggggctgcattcctttt---ggaggctctagagagaatgtgctcccttgccttttccagtttctagaagccacccccattcct--tgactcaccttgaagatggcccctgactccatcttcaaagtcagaagtgcagcatcttcaaatcttcctctctgacctcttctttcatcaccacatctccttctctaattctgactctcctacctcc---tttctcttataaagatccttgtgattGGTgggcatgggggctcccatctataatcccaacattttgggaggccaaagaggaaggaatgcttgaggccaagagttc-aaaatcagccttggcatcatagcaaga---ccctgcctttacaaaat--taacattaaaatcagctgggcatggtgatgcacatctgtagtcccagctactggagaggtgaaggtgggaggattgctttagcttaggagg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4232264 1009 + 4392246 atggct--ttttttttttttt------------------tttt---tgagacggagt----ctcggtc-----gcccaggctgaagtgtaagggtgcgatcttggctcactgcaatgtctgccttttgggttcaagtgattctct-------gcctcccgagtagctgggattacaggcacccaccaccacacctggctaatgtttgtatttttagtagagatggggtttcaccatcttggctaggctggtct-tgaacttctgacctc--gtgatccaccctcctc-gcctcccaaag-tgctgggattacaggcgtgagccactgcgcctggccttttaaaaaaa-tttttttt-agacatgaggtctcattatgttgcccaggctggtcttaagctcctgggcttaagcgatcctcccacctcagcctcctaaagttctgggattacaggcgtgagcaactgTAACATGAGGTCCCAGCTTCATGTTCAtt-ttttgttgttgctacaacaaagtaccctacatttagtggcatcaaacaccacaaatctaccatcttacagttctgggggccagaagccc-aactaggtctattaaggctaaagtcaaggtgtcagaggggctgcattccttct-ggggaggctctagacagaatgtgctcctttgccttttccagcttctagaagccacccccattcct--tgacttacctcg-----------tgactccatattcaaggccagaagtgcagcatcttcaaatctccctctctgacctcttcttccattaccacatcactttctctaattctgactctcctacctcc----ttctcttataaagatccttgtgattGGTgggtatgggggctcccatctgtaatcccaaca-tttgggaggccaaagaggaaggattgcttgaggccaagagtta-gagatcagcctggggaaaataggaaga---ccctgcctttacaaaat--taaaattaaaatcagctggacatggtgatgcacgcctgtagttccagctactggagaggctaaggtgggaggattgctttagcctaggagg i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46803260 1028 - 99891981 ctggctaatttttttcttttt------------------tttt----gagacggagt----ttcagtc-----gcccaggctgaagtgcaacagtgcaatctcagctcactgcagtgtctgcctttcgggttcaagtgattctct-gcctcagcctcccgagtagctgggattaca----cccaccaccacacctggctgatttttgtgtttttagtagagatggggtttcaccatcttggccaggctggtct-tgaacttctgacctt--gtgatccacccacctcggcctcccaaag-tgctaggattacaaatgtgagccaccacgcccggcctttttaaaaaa-attttttt-agacatgaggtctcattatgttgcccaggctggtcttaagctcctgggctcaagcaatcctcttacctcagcctcctaaagtcctgggattacaggcatgagcaactgTAACATGAAGCCCTGGCTTtatgttcattatttacttgctgctacaacaaactaccctatatttagtggcttgaaacaccataaatctaccaccttacagttctaggggccagaagccc-aactagatctattaaggctaaagtcaaggtgtcagaggggcgacattccttct---ggagactctagatagaatgagcttctttgccttttccagcttctagaagccacccccattcct--tgactcaccctgaagatggcccctgactccatattcaaggccagaagtgcagcatcttcaaatctccctctctgacctcttcttccatcaccacatctccttctctaattctgactctcctacctccttgtttctcttataaagatccctgtgattGGTgggcatgggggctcccatttgtaatcccaacactttgggaggccaaagaggaaggattgcttgaggccaagagttc-aagatcagcctagggaacataggaaga---ccctgcctttacaaaat--taaaattaaaatctgctggacatggtgatgcacgcctgtagttccagctactggagaggctaaggtaggaggatcactttagcctaggagg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55108986 1024 + 185818997 ctaatt--ttttttttttttt------------------tttt----gagacagagt----ctcagtc-----atccaggctgaagtgtaacagcacgatctcggcttgctgcaaagtctgcctttcaggttcaagtgattctct-gcctcagcttcctgagtagctgggattacagg-------caccacacctggctaattttcgtatttttagtagagatggggtttcaccatattggccaggctggtct-tgaacttctgacctt--gtgatccaaccccctcggcctcctaaaagtgctgggatcacaaatgtgagccaccgcgcccggcctttttaaaaaa-actttttt-agacatgaagtctcattatattgcccaggctggtcttaagctcctgggctcaagcgatcctcctacctcagcctcccaaagtgctgggattacaggcatgagcaactgTAACATAAAGCCCCAGCTTCAtgttcatt-ttttcttgctgctacaacaaactaccctatatttagtggtttgaaacaccacaaatctaccaccttacagttctggggtccagaagccc-aactagatatattaaggctaaagtc-aggtgtcaaaggggctgcattccttct---ggaggctctagagagaatgtgctcccttgccttttccagcttctagaagccacccccattcct--tgactcatcttgaagatggcccctgactccatattcaaggccagaagtgcagcatcttcaaatctccctctctgacctcttcttccatcaccacatctccttctctaactctgactctcctacctccttctttctcttataaagatccttgtgattGGTgggcatgggggctcccatctgtaatcccaacactttgggaggccaaagagaaaggaatgcttgaggccaagagttt-gagaccagtctggggaacataggaagacccccctgcctttacaaaat--taaaattaaaatcagctggacatggtgatgcatgcctgtagttccagctactggagaggctaaggt-ggaggatcgctttagcctaggagg i rheMac8.chr3 I 4 C 0 s cerAty1.NW_012005081v1 46675 1028 - 113584 cttttt--ttatttttatttt------------------tttt----gagagacagt----ctcggtc-----gcccaggctgaagtgcaatggcgcgatctcggctcactgcaatgtctgccttttgggttcaagtgattctct-gactcagcttcccgagtagctgggattacaggcacccatcaccacacctggctgatttttgtatttttagtagagatggggtttcaccatcttggccaggctggtct-tgaacttctgacctt--gtgattcaccctcctcagcctcccaaac-tgcagggattacaaaagacagccaccacgcctagcctttaaaacaaa-ttttttttaagacatgaggtctcattatgttgcccaggttagtcttaagctcctgggctcaagtgatcctcccacctcagcctcctaacatcctgggattataggtgtgagcaactgTAACATGAAGCTCTGGCTTCAtgttcatt-ttttcttgctgctacaacaaaagaccctacatttagtgccttcaaacaccataaatctaccatcttaccgttctgggggccagaagccc-aactaggtctattaaggctaaagtc-aggtgtcagaggggctgcattccttct---ggaggctctagagagaatgtgctcccttgccttttccagcttctagaagccacccccaatctt--tgactcacattgaagttggcccctgatgccatattcaaggccagaagtgcagcatcttcaaatctccctctctgacctcttcttccatcaccacatctccttctctaattctgactctcttacctgcttctttctcttataaagatccttgtgattGGTgggcatgggggctcccatctgtaatcccaacactttgggaggccaaagaggaaggaatgtttgaggtcaagagctt-gagatcaacctagggaacataggaaga---ccctgcctttacaaaat--taaaattaaaatcagctggacatggtgatgcacgcctgtagttccagctactggacaggctaaggt-ggaggatcgcgttagcctaggagg i cerAty1.NW_012005081v1 I 4 C 0 s chlSab2.chr21 124158071 1018 - 127223203 ctaatt--ttttttttttttt------------------tttt----gagacagaat----ctcagtc-----atccaggctgaagtgtaacaacgctatctcggctcgctgca--gtctgcctttcaggttcaagtgattctct-gcctcagcttcctgagtagctgggattacagg-------caccacacctggctaatttttgtatttttagtagagatggggtttcaccatcttggccaggctggtct-tgaacttctgacctc--atgatccaaccccctcagactcctaaaagtgctgggatcacaaatgtgagccaccgcgcccggcctttttaaaaaa-actttttt-agacatgaggtctcattatgttgcccaggctggtcttaagctcctgggctcaagcgatcctcctacctcagcctcccaaagtgctgggattacaggcatgagcaactgTAACATAAAGCCCCAGCTTCAtgttcatt-ttttcttgctgctacaacaaactaccctatatttagtggcttgaaacaccacaaatctaccaccttacagttctggggtccagaagccc-aactagatatattaaggctaaagtc-aggtgtcagaggggctgcattccttct---ggaggctctagagagaatgtgctccgttgtcttttccagcttctagaagcca-ccccattcct--tgactcatcttgaagatggcccctgactccatattcaaggccagaagtgcagcatcttcaaatctccctctctgacctcttcttccatcaccacatctccttctctaactctgactctcctacctccttctttctcttataaagatccttgtgattGGTgggcatgggggctcccatctgtaatcccaacactttgggaggccaaagagaaaggaatgcttgaggccaagagttc-gagaccagtctggggaacacaggaaga---ccccgcctttacaaaat--taaaattaaaatcagatggacatggtgatgcacgcctgtagttccagctactagagaggctaaggt-ggaggatcgctttagcctaggagg i chlSab2.chr21 I 4 C 0 s calJac3.chr2 1427753 1036 + 204313951 ctggct--tattttttatttttaatttaatttagttttatttc----aaaatggagt----ttcactcttcttgcttagcctggagtgcaatggtgcaatcccaggtcactgcaacctccacctcgtgggtttaagtgattctcctgccttggcctcccaagtagctgggattacaggtaagtgccaccatgcctggctaatttttgtatttttagtagaggtggggttttgccatgttggtcaggctgatctaaaaactcctgacctcaggtgatctaccctcctcaacctcccaaag-agctgggattacaggagtgaggcactgtgcctggctaatttaa-----ttttttgt-agagacagggtctc-ctatgttgtccaggcttgtcttgaactcctggcctcaagtgttcctcctgcctgaa-ttcctaaagtgctgagattactgacatcggccaccat---------gcctggcTTCATGTTTAtt-tcttcttgctgctacaacaaactcccctacatttagccacttaaaacaccacaaatataccatcttacatttctgggggtcagaagcccaaacgaggtctattaaggctaaagtgaaggtgtcagcagggctgcattccttct---ggaggctctgaa------gtgttcccttggcttttctggcttctgaaagccaccccccctcctccctgcttttttggatcatggcccctgactccatcttcaaagac--aagtgaagcatcttcaaatctccctctctgatctctgcttccatcaccccattttctgctccaattctgattcttttaccctc---tttcttttataaggacctttgagattgctgcgcatggtggctttcatccataagcccaattctttgggaggtcaaggtaggaggaacgcttgaggcccagagttt-gaaactagcatggacaacatagtgaga--cccccacctctaagaaagtataaaaaaaaaattagccagacatggcagtgagtgcctgtagtcccagctacttcagaggctgaggtgagatgattgctttagcccaggaAG i calJac3.chr2 C 0 I 1901 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 766873 3341 + 1536524 I e manLeu1.NW_012100344v1 50053 2702 - 148006 I e macNem1.NW_012013022v1 8956824 3228 - 10413719 I e macFas5.chr3 127701230 2688 - 192294377 I a score=3441005.000000 s hg38.chr3_KI270784v1_alt 33263 1555 + 184404 tcaaggctgcagtgagctatgatcacatcactgcactccagcctcagtggcagagtgagactctgtctccgatataagaaaagaaatatacatttggtctctgcccctggttcctggcatagagcttccaaagctcttataaagcccttcgtgacagaggtaataggagcattttctgttttgatatttagtcttagtcccaggttcctgacacaagggcctctaag------------------gtctttcagatctgcagcatggtaagaatgcatgtgggatgctgttgagctaacggggtggctgcaagctccgagactgcttcaggaggagggctagctgccagagaaagcaaccaca-tttttttttta---------------aaacagagtttggctcttgtagcccaggctggagtgcaatggcacaatctcagctcgctacaacctccacctcccgggttcaagcaattctcctgcctcggcctcccgagtagctggaattataggggtgtgccacaatgcctagctaactgttgttatttttagtagaaacggggtttcaccatgttggtcaggctggtctcaaactcttgacctcaagtggtccatgtgcctcagccttccaaactgctaggattacaggagtgagccaccgcacctggccccaaccacattttttgaggcttggaactttcagcctcacctgctgaactccaggaggcaaaaggaactggagattgacttaactaccaatggccagtgattttatcaatcatgcctccataaaca-cccaaacagcagggtttggagag-cttctgtgttgctaaacacaaggaggtcctgggagggtagtgtgcccaacagagggcatggaagctctgtgcccctccccacttaccttgtcctgtgcatctctttcattggctgttcctgagatggagccattacattgagccagtaatagaaaataaggtggccagatgcactggctcatgcccgtaatcccagcactttgggaggcagaggt-gggcggaatcacttgagcctaggaatttgagaccaacctgggcaacataagaagaccccatctatacaaaaaataaaagaaattagccaaatgtggtggtgggaaccctgtaattccagctacttgagaggctgaagcaggagaatcacttgagccctggatgttgaggcttcaa-taagctatgattgcaccactgcacaccagcttggacaacagagcgaggccctgtctcttaaaaa---------gaaaagaaaaaaaa----------cttgtttttctaagttctgtgagttgttctagtaaataattaaactcaacaagagggtcatgggaaaccctgatttctaactggttggtcaaaatacaggtgacaacctaggacttgcaactggcatctgaagtgagggtggtcttgtgggactgagcccctaacctgtgggttctgtgctaactctaggtagtgtcagaatggaattgtgggatacgcggttggcatccagagagttggagaactggtgtagaaactctgcacacacatttggtcagaagtctgtgagtagagagaaac s panTro5.chr1 222316977 1522 + 228573443 tcaaggctgcagtgagctatgatcacatcactgcactccagcctcagtggcagagtgagactctgtctccaatataagaaaagaaatatacatttggtctctgcccctggttcctggcatagagcttccaaagctcttataaagcccttcgtgacagaggtaataggagcattttctgttttgatatttagtcttagtcccaggttcctgacacaagggcctctaag------------------gtctttcagatctgcagcatggtaagaatgcatgtgggatgctgttgagctaacagggtggctgcaagctcctagactgcttcaggaggagggctagctgccagagaaagcaaccaca-tttttttttaa---------------aaacagagtttggctcttgtagcccaggctggagtgcaatggcacaatctcagctcactacaacctccacctcccgggttcaagcaattctcctgcctcggcctcccgagtagctggaattatagggatgtgccacaacacctagctaactgttgttatttttagtagaaacagggtttcaccatgttggtcaggctggtctcacactcttgacctcaagtggtccatgtgcctcagccttccaaactgctaggattacaggagtgagccaccgcacctggccccaaccac---ttttgaggcttggaactttcagcctcacctgctgaact------------------------------taactaccaatggccaatgattttatcaatcatgcctccataaaca-cccaaacagcatggtttggagag-cttctgtgttgctaaacacaaggaggtcctgggagggtagtgtgcccaacagagggcatggaagctctgtgcccctccccacttaccttgtcctgtgcatctctttcattggctgttcctgagatggagccattacattgagccagtaatagaaaataaggtggccagatgcgctggctcatgcccgtaatcccagcactttgggaggcagaggt-gggcggaatcacttgagcctaggaatttgagaccaacctgggcaacataagaagaccccatctatacaaaaaataaaagaaattagccaaatgtggtggtgggaaccctgtaattccagctacttgagaggctgaagcaggagaatcacttgagccctggaggttgaggcttcaa-tgagctatgattgcaccactgcacaccagcttggacaacagagcgaggccctgtctcttaaaaa---------gaaaagaaaaaaaa----------cctgtttttctaagttctgtgagttgttctagtaaataattaaactcaagaagagggtcatgggaaaccctgatttctaactggttggtcaaaatacaggtgacaacctaggacttgcaactggcatctgaagtgagggtggtcttgtgggactgagcccctaacctgtgggttctgtgctaactctaggtagtgtcagattggaattgtgggatacgcggttgatatccagagagttggagaactggtgtagaaactctgcacacacatttggtcagaagtctgtgagtagagagaaac i panTro5.chr1 C 0 C 0 s panPan2.chr7 56730071 1549 + 162613886 tcaaggctgcagtgagctacgatcacatcactgcactccagcctgggtaggagagtgagactctgtctcaaatataagaaaagaaatatatatttggtatttgcccc-ggttcctggcacaaagcttctaaagctcttataaagtccttagtgatagaggtaataggagcaccttctgttttaatatttggtcttagtcccaggttcctgacacaaggacctctaag------------------ttctttcagatctgcagcatggtaagaaagcatgtgggatgctgttgagatgcctgggtggctggaagttcctagactgcttc---agaagggctggttgccagagaaaccaaccacatttttttttttt---------------aaatggagtttggctcttgcagcccaggctggagtgcaatgggacaatctcggctcaccacaacctccgcctcccgggttcaagctattctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccatgaccagctaatttttg-tatttttagtagagacggggtttcatcatgttggtaaggctggtcttgaactcctgacatcaggtgatctgcccacctcggcctcccaaagtgttgggattacaggcgtgagccaccgtgcccaaccccaaccacattttttgaggcttggaactttcagccttactggctgaactccaggaggcaaaaggggctggagattgacttaaccaccaatggccaatgattttatcaatcatgcctccataaaaatcctaaacaacagggtttggagag-cttctgtgttgctgaacacaaggaggtgctgggagggtagcatgcccaacagagggcatggaagctctgtgcccctccccacttaccctg--caatacatctctctcattggctgttcctgagatgcagcctttacactgagccagtaatagaaaataaactggccagatgtggtggctcatgcctgtaatcccggcactttcggaggcagaggt-ggg-ggaatcacttgagcccaggaatttgagaccagactgggcaatgtaacaagaccccatctatacaaaaaattaagaaaattagccagatgtggtggtgggaaacttgtaattccagctacttgagaggctgaagcaggaaaatcacttgagccctggaggttgaggcttcaa-tgagctatgattgcaccagtgcactccagcctgggcaacagaacgagaccctgtctcttaaaaa---------aaaaggaaaaaaac----------cctgtttttctaagttctgtgagttgttctagcaaataattaaacccaagaagagggtcatgggaacccctgatttctaactggttggtcaaaatacaggtgacaacctaggacttgcaactagcatctaaagtgaggttggtctcgtgggactgagcccctaatctgtagggtctgcactaactccaggtagtgtcaggatggaactgtgggatatgcagttggtatccagagagttggagaattggtgtagaaactctgcactcacatttggtcagaagtgtgtgagtagagagaaac i panPan2.chr7 C 0 I 6 s gorGor5.CYUI01015383v1 4233273 1550 + 4392246 tcaaggctgcagtgagctatgatcacatcactgcactccagcctcagtggcagagtgagactctgtctccaatataagaaaagaaatatacatttggtctctgcccctggttcctggcatagagcttccaaagctcttataaagcccttcgtgacagaggtaataggagcattttctgttttgatatttagtcttagtcccaggttcctgacacaagggcctctaag------------------gtctttcagatctgcagcatggtaagaatgcatgtgggatgctgttgagctaacagggtggctgcaagctcctagactgcttcaggaggagggctagctgccagagaaagcaaccaca-tttttttttt----------------aaacggagtttggctcttgtagcccaggctggagtgcaatggcacaatctcagctcactacaacctccacctccc-ggttcaagcaattctcctgcctcggcctcccgagtagctggaattatagggatgtgccacaacgcctagctaattgttgttatttttagtagaaacggggtttcaccatgttggtcaggctggtctcaaactcctgacctcaagtggtccatgtgcctcagccttccaaactgctaggattacaggagtgagccaccgcacctggccccaaccacattttttgaggcttggaactttcagcctcacctgctgaactccaggaggcaaaaggaactggagattgacttaactaccaatggccaatgattttatcaatcatgcctccataaaaa-cccaaacagcagggtttggagag-cttctgtgttgctaaacacaaggaggtcctgggagggtagtgtgcccaacagagggcatggaagctctgtgcccctccccacttaccttgtcctgtgcatctctttcattggctgttcctgagatggagccattacattgagccagtaatagaaaataaggtggccagatgcgctggctcatgcc-gtaatcccagcactttgggaggcagaggt-gggcggaatcacttgagcctaggaatttgagaccagcctgggcaacataagaagaccccatctatacaaaaaataaaagaaattagccaaatgtggtggtgggaaccctgtaattccagctacttgagaggctgcagcaggagaatcacttgagccctggaggttgaggcttcaa-tgagctatgattgcaccactgcacaccagcctggacaacagagcgaggccctgtctcttaaaaa---------gaaaagaaaaaaa-----------cctgtttttctaagttctgtgagttgttctagtaaataattaaactcaagaagagggtcatgggaaaccctgatttctaactggttggtcaaaatacaggtgacaacctaggacttgcaactggcatctgaagtgagggtggtcttgtgggactgagcccctaacctgtgggttctgcgctaactctaggtagtgtcagaatggaattgtgggata-gcggttggtatccagagagttggagaactggtgtagaaactctgcacacacatttggtcagaagtctgtgagtagagagaaac i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46804288 1554 - 99891981 tcaaggttgcagtgagctatgatcacatcactgcactccagccttggtggcagagtgagactctgtctcaaatataagaaaagaaatacacatttggtctctgcccctggttcctggcatagagcttctaaagctcttataaagtccctagtgacagaggtaataggagcactttctgttttaatatttagtcttagtcccacgttcctgacacaagggcctctaaggtctttcagatctgtagcgtctttcagatctgtagcatggtaagaatgcaagtgggatgctgttgagctgacagggtggctgaaagctcctagactgcttcaggaggagggctggctgccagaggaaccaaccaca-ttttttttt-----------------aaatggagcttggctcttgtagccgaagctgg-----aacggcacaatctcagctcactgcaacctccacctcccacgttcaagcaattctcctgcctccgcctcctgagtagctggaattatagggatgcaccacaatgcccagctaatttttgttatttttagtagagacggggtttcaccatgttggtcaggctggtctcaaactcctgacctcaagtgatccacatgcctcggcctcccaaagtgctaggattacaggcatgagccaccgcgcccggccccaaccacattttttgaggcttggaactttcatcctcacctgctgaactccaggaggcaaaagggattggagactgacttaactaccaatggcca--------atcaatcatgcctccataaaaa-ctcaaataacggggtttggagaaccttccgtgtcgcggaactcagaagag---caggagagtagcgagcccaacagagggcacggaagctctgagcccctcgacaa-tacgttgtcatgtgcatctatttcactggttgttcctgagatggagcctttacgttgagccagtaatagaaaataagctggccagatgtggtggctcatgcctgtaatcccagcactttgggaggcagaggt-gggcggaatcacttgagcctaggaatttgagaccagcctgggcaacataagaagaccccatctatacaaaaaataaaagaaattagccagatgtggtggtggaaaccctgtaattccagctacttgagaggctgaagcaggagaatcacttgagccctggaggctgaggcttcaattgagctatgaccgcaccactacacaccagcttggacaacagagtgaggccctgtctctt-aaaa---------gaaaagaaaaaaa-----------cctgtttttctaagttctgtgagttgttctagtaagtaattaaactcaagaagagggtcatgggaaaccctgatttctaactggttggtcaaaattcaagtgacaacctaggacttgcaattggcatctgaactgagggtggtcttgtgggactgagcccctaacctgtggggtctgcactaactccaggtattgtcagaatggaactgtgggatacgcagttggtatccagacagttggagaattcgtgtagaaactccacacacacatttggtcagtagtgtgtgagtagagagaaac i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55110010 1557 + 185818997 tcaaggctgcagtgagctatgatcacatcaccatactccagcctcagtggcagagcgagactctatctcaaatataagaaaagaaatatacatttggtctctgcccctggttcctggcatagagcttctaaagctgttatagagtccttagtgaccgaggtaacaggagcatttcctgttttaatatttagtcttagtcccagtttcctgacacaagggcctctaag------------------gtctttcagatctgcagcatggtaagaatgcatgtgggatgctgttgagctgacagagtggctgcaagctcccagactgcttcaggaggagggctggctgccagaggaaccaaccaca-ttttttttttt---------------aaacggagtttggctcttgtagtccaggctggagtgcaatggcacaatctcagctcactgcaacctccgcctcccaggttcaagcaattctcctacctcggcctcctgagtagctggaattatagggatgtgccacaatgcccagctaatttttg-tatttttagtagagatggggtttcaccatgttggtcaggctggtttcaaaatcctgacctcaagtgatctgcacgcctcggcctccccaagtgctaggattacaggcatgagccactgcgcccagccccaaccacatttcttgaggcttggaactttcagcctcacctgccgaactccaggaggcaaaagggactggagattgacttagctaccaatggtca--------atcaatcatgcctccataaaaa-cccaaacaacagggtttggagaa-cttctgtgtcgctgaacacaaggaggtgctgggagggtagtgtgcccaacagagggcatggaagctctgtgcccctccccacttaccttgccctgtgcacctctttcactggctgttcctgagatggagcctttacattgagccagtaacagaaaataagctggccagatgaggtggctcatgcctgtaatcctagcactttgggaggcagaggtagggggaaatcacttgagtctaggaatttgagaccagcttgggcaacataacaagaccccatctatacaaaaaataaaagaaattagccagatgtggtggtgggaaccctgtaattccagctacttgagaggctgaggcaggagaatcacttgagccctggaggttgaggcttcaa-tgagctatgattgcaccactgcacgccagcctggacaacagagcaaggccctgtcttttaaaaa---------aaaagaaagaaagaaaaggaaatacctgtttttctaagttctgtgagttgttctagcaaataactaaactgaagaagagagtcatgggaaaccctgatttctaactggttggtcgaaatacaggtgacaacctaggacttgcaattggcatctgaagtaagggtggtcttgtgggactgagcccctaacctgtgaggtctgcactaaccccaggtagtgttggaatggaattgtggaatacgcagttggtatccagagagttggagaaccggtgtagaaactccacacatacatttggttagaagtgtgtgagtagagaaaaac i rheMac8.chr3 C 0 I 6 s cerAty1.NW_012005081v1 47703 1537 - 113584 tcaaggctgcagtgagctatgatcacatcactgcactccagcctcagtggcagagtcagactctgtctcaaatataagaaaagaaatatatatttggtctctgcccctggttcctggcatagagcttctaaagctcttataaagcccttagtgacaaaggtaataggagcattttctgttttgatatttagtcttagtcccaggttcctaacacaggagcctctaag------------------ggctttcagatctgcagcatggtaagaatgcatgcgggatgctgttgaactgacagagtggctgcaagctcctagactgcttcagaaggagggctggctgccagaggaaccagccgca-tttttttttttttttttttttttttgagacggagtctcgctc-tgtcgcccaggctggagtgcagtggcacaatctcagctcactgcaacctccgcctcctgggttcaagcaattcttctgcctcagtctcctgagtagctggaattatagggatgtgccataacgcccagctaatttttgttatttttagtagagacggggtttcaccatgttggtcaggctgatctcaaactcctgacctcaaatgaatcacatgcctcggcctcccaaactgctaggattacaggcgtgagctgccgcgcccggcctcaaccacattttttgaggcttggaactttcagcctcacctgctgaactccaggaggcaaaaggaactggagattgacttaactagcaatgaccaatgattttatcaatcatgcctccataaaaa-cccaaacagcagggtttggagag-cttccacattgctgaacacaaggaggtgctgggagggtagcgtgcccaacagagggcatggaagctctgtgcccctccccacttaccttgtcctgtgcatctctttcattggctgttcctgagatggagcctttacattaagccagtaatagaaaataagctgg-cacatgcggtggttcatgcttgtaatcccaggactctgggaggcagaggt-gggcggaatcacttgagcttaggaatttgagaccagcttgggaaacataagaagaccccatctatacaaaaaat-----aaattagccagatgtggtggtgggaactctgtaattccagctccttgagaggctgaagcaggagaatcacttgagccctggaggttgaggcttcaa-tgagctacgactgcaccattgcactccagcctggacaacagagcgaggccctgtctcttaaaaa---------aaaaaaaaagaaaagaaaaaaaatcctgcttttctaagttctgt------------------------------------gtcatgggaaaccctgatttctaactggttggtcgaaatacaggtgacaacctaggacttgcaattggcatctgaagtgagggtggtctcgtgggactgagcccctaacctgtgaggtctgcattaacccgaggtagtattggaatggaattatggaatacgcagttggtatccagagagttggagaattggtgtagaaactccacacacacatttggtcagaagcatgtgagtagagagaaac i cerAty1.NW_012005081v1 C 0 I 6 s chlSab2.chr21 124159089 1566 - 127223203 tcaaggctgcagtgagctgtgatcacatcaccatactccagcctcagtggcagagcgagactctgtctcaaatataagaaaagaaatatacatttggtctctgcccctggttcctggcatagaacttctaaagctcttatagagtccttagtgaccgaggtaacaggagcatttcctgttttaatatttagtcttagtcccagtttcctgacacaagggcctctaag------------------gtctttcagatctgcagcatggtaagaatgcatgtgggatgctgttgagctgacacagtggctgcaagctcccagactgcttcaggaggagggctggctgccagaggaaccaaccaca-tttattttttt---------------aaacggagtttggctcttgtagcccaggctggagtgcaatggcacaatctcagctcactgcaacctctgcctcccaggttcaagcaattctcctacctcggcctcctgagtaggtggaattatagggatgtgccacaacgcccagctaatttttg-tatttttagtagagatggggtttcaccatgttggtcaggctggtttcaaaatcctgacctcaagtgatccgcacgcctcggcctcccaaagtgctaggattacaggcatgagccactgcacccagcctcaaccacatttcttgaggcttgaaactttcagcctcacctgccgaactccaggaggctaaagggactggagattgacttagctaccaatggtca--------atcaatcatgcctccataaaaa-cccaaacaacagggtttggggaa-cttctgtgtcgctgaacacaaggaggtgctgggagggtagcgtgcccaacagagggcatggaagctctgtgcccctccccacttaccttgccctgtgcacctctttcactggctgttcctgagatggagcctttacattgagccagtaacagaaaataagctggccagatgaggtggctcatgcctgtaatcctagcactttgggaggcagaggtggggggaaatcacttgagtctaggaatttgagaccagcttgggcaacataacaagaccccatctatacaaaaaataaaagaaattagcctgatatggtggtgggaaccctgtaattccagctacttgagaggctgaggcaggagaatcacttgagccctggaggttaaggcttcaa-tgagctacgattgcaccactgcatgccagcctggacaagagaacaaggccctgtctttaaaaaaaaaaaaaagaaaagaaagaaaggaaaggaaaaacctgtttttctaagttctgtgagttgttctagcaaataactaaactcaagaagagagtcatgggaaaccctgatttctaactggttggtcgaaatacaggtgacaacctaggacttgcaattggcatctgaagtaagggtggtctcgtgggactgagcccctaacctgtgaggtctgcactaaccccaggtagtgtcaaaatggaattgtggaatacgcagttggcatccagagagttggagaattggtgtagaaactccacacacacatttggttagaagtgtgtgagtagagaaaaac i chlSab2.chr21 C 0 I 6 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1428789 1901 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 766873 3341 + 1536524 I e manLeu1.NW_012100344v1 50053 2702 - 148006 I e macNem1.NW_012013022v1 8956824 3228 - 10413719 I e macFas5.chr3 127701230 2688 - 192294377 I a score=1353.000000 s hg38.chr3_KI270784v1_alt 34818 3 + 184404 Gtg s panTro5.chr1 222318499 3 + 228573443 Gtg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4234823 3 + 4392246 Gtg i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46805842 3 - 99891981 atg i nomLeu3.chr17 C 0 I 1100 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1428789 1901 + 204313951 I e cerAty1.NW_012005081v1 49240 6 - 113584 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 766873 3341 + 1536524 I e rheMac8.chr3 55111567 6 + 185818997 I e manLeu1.NW_012100344v1 50053 2702 - 148006 I e chlSab2.chr21 124160655 6 - 127223203 I e macNem1.NW_012013022v1 8956824 3228 - 10413719 I e macFas5.chr3 127701230 2688 - 192294377 I e panPan2.chr7 56731620 6 + 162613886 I a score=273119.000000 s hg38.chr3_KI270784v1_alt 34821 1063 + 184404 ttgcaggaagtcagggaccccaaacggagggactggctgaagccacagcagaagaatataaattgtgaagatttcatggacatttattagttccccaaattaatacttctataatttcttaggcctgtcattactgcaatctctgaacataaattgtgaagatttcatggacacttatcacttccccaatcaatacccttgtgattttctatgcctgtcttta-----atctcttaatccgctcatcttcgtaagctgaggatgaatgtccccgcaggaccctgtgataattgcgttaactgcacaagttgtttaaacaatatgaaacctgggcaccttgaaaaaagaacaggataacagcaatttcagggaacaagggagataaccttaaactctggctgcctgtgggccgggttgaacagagccatatttctcttctttcaaaagcaaataggagaagtattgctgaattctttttctcagcaaagaacatccctgagaaagagaatgcatccctaaggggaggcctctgaaatggccgctttggggacggctgtcttttacagtcatagataagggatgaaataagccctgggttcgcgtggcgctcccaggcttatcaggacaaggaaattcccgcctaataaatgttggtcagatgggttgtctgctctcaaaccctttctcctgataagatgttatcaatgacaatgcgcgcccgaaacttcattagcaattttaatttcgccccagtcctgtggtcctgtgatcttgccctgcctccatttgccttgtgatattttattaccttgtgaagcatgtgatctctgtgacccacaccctattcgtacactccctcaccttttgaaaatcactaataaaaacttgttggttttgcggcttggggggcatcacggaacctgccgacgtgtgatgtctcccctggacatccagctttaaaatttctctcttttgtactctttccctttatttctcagactggctgacactcagggaaaatagaaaagaacctacatgaaatatcaggggtgaatttcccccgataTC s panTro5.chr1 222318502 1068 + 228573443 ttgcgggaagtcagggaccccaaacagagggactggctgaagccacggcagaagaacataaattgtgaagatttcatggacatttattagttccccaaattaatacttctataatttcttaggcctgtctttactgcaatctctgaacataaattgtgaagatttcatggacacttatcacttccccaatcaatacccttgtgatttcctatgcctgtctttactttaatctcttaatccggtcatcttcgtaagctgaggatgaatgtccccgcaggaccctgtgataattgcgttaactgcacaagttgtttaaacaatatgaaacctgggcaccttgaaaaaagaacaggataacagcaatttcagggaacaagggagataaccttaaactctggctgcctgtgggccgggtggaacagagccatatttctcttctttcaaaagcaaataggagaaatattgctgaattctttttctcagcaaagaacatccctgagaaagagaatgcatccctaaggggaggcctctgaaatggccgctttggggacggctgtcttttacagtcgtagataaaggatgaaataagccctgggtttgcgtggcgctcccaggcttatcaggacaaggaaattcccgcctaataaatttttgtctgatgggttgtctgctctcaaaccctttctcctgataagatgttatcaatgacaatgcgtgcccgaaacttcattagcaattttaatttcgccccggtcctgtggtcctgtgatcttgccctgcctccatttgccttgtgatattttattaccttgtgaagcatgtgatctctgtgacccataccctattcgtacactccctccccttttgaaaatcactaataaaaacttgttggttttgtggcttggggggcatcacggaacctgctgatgtgtgatgtctcccctggacacccagctttaaaatttctctcttttgtactctttccctttatttctcagaccggctgacactcagggaaaatagaaaagaacctacatgaaatatcaggggtggatttcccCGGATATC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4234826 1048 + 4392246 ttgcgggaagtcaggga-cccaaacggagggaccggctgaagccacggcagaagaacataaattgtgaagatttcatggacatttattagttccccaaattaatacttctataatttctt-ggcctgtctttactgcaatctctgaacataaattgtgaagatttcatggacacttatcacttccctaatcaatacccttgtgatttcctatgcctgtctttactttaatctcttaatccggtcatcttcgtaagctgaggatgaatgtccccgcaggaccctgtgataattgcgttaactgcacaagttgtttaaacagtatgaaacctgggcaccttgaaaaaagaacaggataacagcaatttcagggaacaa-ggagataaccttaaactctggctgcctgtgggcc-ggtggaacagagccatatttctcttctttcaaaagcaaataggagaaatattgctgaattctttttctcagcaaagaacatccctgagaaagagaatgcatccctaa-gggaggcctctgaaatggccgctttgggga-ggctgtcttttacagt--tagataagggatgaaataagccctgggctcgcgtggc-ctcccaggcttatcaggacaaggaaatt-ccgcctaataaattttggtcagatgggttgtctgctctcaaaccctttctcctgataagatgttatcaatgacaatgcgtg-ccgaaacttcattagcaattttaatttcgccccg--tctgt-gtcctgtgatcttgccctgcctccatttgccttgtgatattttattaccttgtgaagcatgtgatctctgtgacccacaccctattc-tacactccctccccttttgaaaatcactaataaaaacttgttggttttgcg--cttgggggcatcac-gaacctgcc-acatgtgatgtctcccctggacacccagctttaaaatttctctcttttgtactctttccctttatttctcagaccggccgacactcagggaaaatagaaaagaacctacatgaaatatc-ggggtgaatttcccccgataTC i gorGor5.CYUI01015383v1 C 0 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1428789 1901 + 204313951 I e cerAty1.NW_012005081v1 49240 6 - 113584 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 766873 3341 + 1536524 I e rheMac8.chr3 55111567 6 + 185818997 I e manLeu1.NW_012100344v1 50053 2702 - 148006 I e chlSab2.chr21 124160655 6 - 127223203 I e macNem1.NW_012013022v1 8956824 3228 - 10413719 I e macFas5.chr3 127701230 2688 - 192294377 I e nomLeu3.chr17 46805845 1100 - 99891981 I e panPan2.chr7 56731620 6 + 162613886 I a score=2871.000000 s hg38.chr3_KI270784v1_alt 35884 8 + 184404 ACACTGGC s panTro5.chr1 222319570 8 + 228573443 ACACGGGC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4235874 8 + 4392246 ACACGGGC i gorGor5.CYUI01015383v1 C 0 C 0 s macFas5.chr3 127703918 8 - 192294377 acaTGAGT i macFas5.chr3 I 2688 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1428789 1901 + 204313951 I e cerAty1.NW_012005081v1 49240 6 - 113584 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 766873 3341 + 1536524 I e rheMac8.chr3 55111567 6 + 185818997 I e manLeu1.NW_012100344v1 50053 2702 - 148006 I e chlSab2.chr21 124160655 6 - 127223203 I e macNem1.NW_012013022v1 8956824 3228 - 10413719 I e nomLeu3.chr17 46805845 1100 - 99891981 I e panPan2.chr7 56731620 6 + 162613886 I a score=6876.000000 s hg38.chr3_KI270784v1_alt 35892 2 + 184404 TC s panTro5.chr1 222319578 2 + 228573443 TC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56731626 2 + 162613886 TC i panPan2.chr7 I 6 C 0 s gorGor5.CYUI01015383v1 4235882 2 + 4392246 TC i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55111573 2 + 185818997 TC i rheMac8.chr3 I 6 C 0 s macFas5.chr3 127703926 2 - 192294377 TC i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 49246 2 - 113584 tc i cerAty1.NW_012005081v1 I 6 C 0 s chlSab2.chr21 124160661 2 - 127223203 TC i chlSab2.chr21 I 6 C 0 s manLeu1.NW_012100344v1 52755 2 - 148006 TC i manLeu1.NW_012100344v1 I 2702 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e calJac3.chr2 1428789 1901 + 204313951 I e saiBol1.JH378167 173844 0 + 13147851 C e colAng1.NW_012116633v1 766873 3341 + 1536524 I e macNem1.NW_012013022v1 8956824 3228 - 10413719 I e nomLeu3.chr17 46805845 1100 - 99891981 I a score=474011.000000 s hg38.chr3_KI270784v1_alt 35894 89 + 184404 TTCTCTCACCTGTCTACCTGCTTAACTTAATAGgagaggcaatgcatggtgctcatgaacaaggcaagcattaaagtcagaccaga-cta s panTro5.chr1 222319580 89 + 228573443 TTCTCTCATCTGTCTACCTGCTTAACTTAATAGgagaggcaatgcatggtgctcatgaacaaggcaagcattaaagtcagaccaga-cta i panTro5.chr1 C 0 C 0 s panPan2.chr7 56731628 90 + 162613886 TTCTCTCACTTGTCTACCTGCTTAACTGCATAGgagaggcaatgcatggtgctcatgaacaaagcaagcattaaagtcaaacaagaccca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4235884 89 + 4392246 TTCTCTCACCTGTCTACCTGCTTAACTGCATAGgagaggcaatgcatggtgctcatgaacaaggcaagcattaaagtcagaccaga-cta i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55111575 90 + 185818997 TTCTCTCACCTGTCTACCTGCTTAACTGCATAGgagagacagtgcatggtgctcatgaacaaggcaagcattaaagtcagaccagaccta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127703928 90 - 192294377 TTCTCTCACCTGTCTACCTGCTTAACTGCATAGgagagacaatgcatggtgctcatgaacaaggcaagcattaaagtcagaccagaccta i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8960052 90 - 10413719 TTCTCTCACCTGTCTACCTGCTTAACTGCATAGgagagacaatgcatggtgctcatggaaaaagcaagcattaaagtcaaacaagaccca i macNem1.NW_012013022v1 I 3228 C 0 s cerAty1.NW_012005081v1 49248 90 - 113584 ttctcttacCTGTCTACCTGCTTAACTGCATAGgagagacagtgcacggtgctcatgaacaaggcaagcattaaagtcagatcagaccta i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124160663 90 - 127223203 TTCTCTCACCTGTCTACCTGCTTAACTGCATAGgagagacagtgcacggtgctcatgaacaaggcaagcattaaagtcagaccagaccta i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 52757 90 - 148006 TTCTCTTACCTGTCTACCTGCTTAACTGCATAGgagagacagtgcatggtgctcatgaacaaggcaagcattaaagtcagaccagaccta i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 770214 90 + 1536524 TTCTCTCACCTGTCTACCTGCTTAACTGCATGGgagagacaatgcatggtgttcatgaacaaggcaagcattaaagtcagaccagaccta i colAng1.NW_012116633v1 I 3341 C 0 s calJac3.chr2 1430690 86 + 204313951 ttttctcACCTG----CCTCCTTAACTGCAGAGGAGACGCAGTGCGTGGTGCTCATGAACAGAGCAAGCGTTAGAGTCACACCAGGCCCT i calJac3.chr2 I 1901 C 0 e aotNan1.NW_018487315v1 6204594 9268 - 15679484 T e cebCap1.NW_016108107v1 298785 0 + 373793 C e saiBol1.JH378167 173844 0 + 13147851 C e nomLeu3.chr17 46805845 1100 - 99891981 I a score=921763.000000 s hg38.chr3_KI270784v1_alt 35983 159 + 184404 acatttgactcagtcctaatattcaggtgagcttgggcaaatcgctcattaaccccaagtcttcatcattttgtgcatataatggggataactgtggcacccacctgt--ttttgtgagaatcaatgaaatattatgcttgATGTTATTGTGATCATGAT-----------A s panTro5.chr1 222319669 159 + 228573443 acatttgactcagtcctaatattcaggtgagcttgggcaaatcgctcattaacgccaagtcttcatcattttgtgcatataatggggataactgtggcacccacctgt--ttttgtgagaatcaatgaaatattatgcttgATGTTATTGTGATCATGAT-----------A i panTro5.chr1 C 0 C 0 s panPan2.chr7 56731718 172 + 162613886 acatttgactcagtcttaatatccaggtgagcttgggcaaatcacttattatccacaagtcttcatcattttgtgtgtaaaatggagataactgtggcacctatctgtgattttgtgagaactaatgaaatactatgattggtgttattgtGATCATTATACCTATTCTAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4235973 159 + 4392246 acatttgactcagtcttaatattcaggtgagcttgggcaaatcgctcattaaccccaagtcttcatcattttgtgcatataatggggataactgtggcacccacctgt--ttttgtgagaatcaatgaaatattatgcttgATGTTATTGTGATCATGAT-----------A i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55111665 159 + 185818997 acatttgactcagtcttaatatccaggcgagcttgggcaaatcgctcattaaccccaagtcttcatcatttcatgcataaaatggggataactgtggcacctacctgt--ttttgtgagaattaatgaaatactatgctcgatgttattgtgatcatcat-----------a i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127704018 159 - 192294377 acatttgactcagtcttaatatccatgtgagcttgggcaaatcgctcattaaccccaagtcttcatcatttcatgcataaaatggggataactgtggcacctacctat--ttttgtgagaattaatgaaatactatgcttgatgttattgtgatcatcat-----------a i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8960142 172 - 10413719 atatttgactcagtcttaatatccaggtgagcttgggcaaatcacttattatccccaagtcttcatcattttgtgtgtaaaatggggataactgtggcacctacctgtgattttgcgagaactaatgaaatactatgcttgATGTTATTGTGATTATTATACCTACTCCAAA i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 49338 159 - 113584 acatttgactcagtcttaataaccaggtgagcttgggcaaatcgctcattaacaccaagtcttcatcattttgtgcataaaatggggataactgtggcacctacctgt--ttttgtgaaaattaatgaaatattatgcttgatgttattgtgatcatcac-----------a i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124160753 159 - 127223203 acatttgactcagtcttaatatccaggtgagcttgggcaaatcgctcattaaccccaagtcttcatcatttcgtgcataaaatggggaaaactgtggcacctacctgt--ttttgtgagaattaatgaaatactatgctcgatgttattgtgatcatcat-----------a i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 52847 159 - 148006 acatttgactcagtcttaatatccaggtgagcttgggcaaatcgctcattaacaccaagtcttcatcatttcgtgcataaaatggggaaaactgtggcacctacctgt--ttttgtgagaattaatgaaatactatcctcgatgttattgtaatcatcat-----------a i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 770304 172 + 1536524 acatttgactcagtcttaatatccaggtgagcttgggcaaatcacttattatccccaagtcttcatcattttgtgtgtaaaatggggataactgtggcaccgacctgtgattttgcgagaactaatgaaatactatgcttgATGTTATTGTGATCATTATACCTATTCCAAA i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1430776 157 + 204313951 ACATCCGCCTCAGTCTTAATA-CTATGTGAGCGTGGGCAAA--GCTCGGTATCCCCAAGTCTTCATCACTTCGTTCAGCAAATGGGGCTAACTGTGGCGCCTGCCTGAGATTTT-GGAGAATTCATGAAACATTATGCTTGATGTTACTGTGACCATCAC-----------A i calJac3.chr2 C 0 I 11862 s aotNan1.NW_018487315v1 6195326 161 - 15679484 acatctgactcagtcttaatatccatgtgagcttgggtaaaacactcattatccccaagtagtcatcacttcattcagaaaatggggctaactgtggcacctgcctgtgattttgggagaattcataaaataTTATGTTTGATGTTATTGTGATCATCAC-----------A i aotNan1.NW_018487315v1 T 9268 I 11 e cebCap1.NW_016108107v1 298785 0 + 373793 C e saiBol1.JH378167 173844 0 + 13147851 C e nomLeu3.chr17 46805845 1100 - 99891981 I a score=76304.000000 s hg38.chr3_KI270784v1_alt 36142 14 + 184404 CTATCTGACAAGGG s panTro5.chr1 222319828 14 + 228573443 CTATCTGACAAGGG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56731890 14 + 162613886 CTATTTGACAAGGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4236132 14 + 4392246 CTATCTGACAAGGG i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55111824 14 + 185818997 ctgtttgacaagta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127704177 14 - 192294377 ctgtttgacaagta i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8960314 14 - 10413719 CTATCTGACAAGGA i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 49497 14 - 113584 ctgtttgacaagga i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124160912 14 - 127223203 ctgtttgacaagta i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 53006 14 - 148006 ctgtttgacaagta i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 770476 14 + 1536524 CTATTTGACAAGGA i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1442795 14 + 204313951 CTATTTGACAGGCA i calJac3.chr2 I 11862 C 0 s aotNan1.NW_018487315v1 6195498 14 - 15679484 CCATCTGACAGGGA i aotNan1.NW_018487315v1 I 11 I 27399 e cebCap1.NW_016108107v1 298785 0 + 373793 C e saiBol1.JH378167 173844 0 + 13147851 C e nomLeu3.chr17 46805845 1100 - 99891981 I a score=43443.000000 s hg38.chr3_KI270784v1_alt 36156 9 + 184404 CAGTGATGC s panTro5.chr1 222319842 9 + 228573443 CAGTGATGC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56731904 9 + 162613886 CAGGGATGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4236146 9 + 4392246 CAGTGATGC i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55111838 9 + 185818997 cagtgaggc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127704191 9 - 192294377 cagtgaggc i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8960328 9 - 10413719 CAGTGATGC i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 49511 9 - 113584 cagtgaTGT i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124160926 9 - 127223203 cagtgaggc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 53020 9 - 148006 cagtgaggc i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 770490 9 + 1536524 CAGTGATGT i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1442809 9 + 204313951 CAGTGATGG i calJac3.chr2 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e cebCap1.NW_016108107v1 298785 0 + 373793 C e saiBol1.JH378167 173844 0 + 13147851 C e nomLeu3.chr17 46805845 1100 - 99891981 I a score=227730.000000 s hg38.chr3_KI270784v1_alt 36165 41 + 184404 ATGATAACATCAAAAAATTAGAAACTGTAATGAGGTCTCTT s panTro5.chr1 222319851 41 + 228573443 ATGATAACATCAAAAAATTAGAAACTGTAATGAGGTCTCTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 56731913 41 + 162613886 ATAATAACGTCAACAGATTAGAAACTGTAATGAGGTCTCTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4236155 41 + 4392246 ATGATAACATCAAAAAATTAGAAACTGTAATGAGGTCTCTT i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55111847 39 + 185818997 atgataaCATCAAAAACTTAGAAACTGTAATGAGG--TCTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127704200 39 - 192294377 atgataaCATCAAAAACTTAGAAACTGTAATGAGG--TCTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8960337 41 - 10413719 ATGATAACATCAACAGATTAGAAATTGTAATGAGTTCTCTC i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 49520 39 - 113584 ATGATAACATCAAAAACTTAGAAACTGTAATGAGG--TCTC i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124160935 39 - 127223203 atgataaCATCAAAAACTTAGAAACTGTAATGAGG--TCTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 53029 39 - 148006 atgataaCATCAAAAACTTAGAAACTGTAATGAGG--TCTT i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 770499 41 + 1536524 ATGATAACATCAACAGATTAGAAATTGTAATGAATTCTCTC i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1442818 41 + 204313951 ATGATGACATCACAAAATTAGAAACTGTAGTGAGGTCTCTT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108107v1 298785 41 + 373793 ATGATGACATCACAAGATTAGAAACTGTAATGAGGTCTCTT i cebCap1.NW_016108107v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e saiBol1.JH378167 173844 0 + 13147851 C e nomLeu3.chr17 46805845 1100 - 99891981 I a score=2990653.000000 s hg38.chr3_KI270784v1_alt 36206 427 + 184404 GGGCAAAATTCCATACAGGCAAATTACTGTCTCTACAAAGCATTTCTGCCACACTTAATTCACCATACCCTGAAC-AAAATGTGCCATCTTCATTGTTCAGGTCTGTATAGTGCTGGTTTCCCTGCCTGGGCAGCTCACTccatcccatcccagcccaatccccatccctccacctcccccttccctccccaCTCTCATACAACTCTTCCTTATCTTACAGGACTTGGCTTCAATGTCACCTTAACTGGAAGCTTCTCTCCCTCTCCAGAAGAGCTTCCGATTGCACTTGATGCATGCACTATTATTTGATCATTTTTGAGTTACAGTCCAAGTCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTTTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGGTCCAGCTAGAAGTGACAAAAAGAC s panTro5.chr1 222319892 427 + 228573443 GGGCAAAATTCCATACAAGCAAATTACTGTCTCTACAAAGCATTTCTGCCACACTTAATTCACCATTCCCTGAAC-AAAATATGCCATCTTTATTGTTCAGGTCTGTATAGTGCTGGTTTCCCTGCCTGGGCAGCTCACTccatcccatcccagcccaatccccatccctccacctcccccttccctccccaCTCTCATACAACTCTTCCTTATCTTACAGGACTTGGCTTCAATGTCACCTTAACTGGAAGCTTCTCTCCCTCTCCAGAAGAGCTTCCGATTGCACTTGATGCATGCACTATTATTTTATCATTTTTGAGTTACAGTCCAAGTCTTTTTGTACCTGAATAACAAGTTGCCCAGTCAGTTTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGGTCCAGCTAGAAGTGACAAAAAGAC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56731954 427 + 162613886 GGGCAAAATTCCATACAAGCAAATTACTGTCTCTCCAAAGCATtcctgccacacttaattcaccattccctgaat-aaaatgtgccattttcattgtccaggtctttacagtgctggtttccctgcctgggcagctcactccaacccattccaGCCCATTCCCCACccctccacctcccccttccctccccactctcatgcaactcttcctcatctttcaggacccggtttcaatgttatcttaactggaagcttctctcaccctccggAAGAGCTTCCCATTGCACTTCATGCATGTACTGTTATTTGACCATTTTTGTGTTATAGTTCAAGTCTTTTTGTACCTGAATAAGATGTTGCCCAGTCAGTCTCTCTTCCTGGACTCTGAAGTCTTTCATGGTAGATTCAGCTGAAAGTGACATAAAGAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4236196 427 + 4392246 GGGCAAAATTCCATACAAGCAAATTACTGTCTCTACAAAGCATTTCTGCCACACTTAATTCACCATTCCCTGAAC-AAAATGTGCCATCTTCATTGTTCAGGTCTGTATAGTGCTGGTTTCCCTGCCTGGGCAGCTCACTccatcccatcccagcccaatccccatccctccacctcccccttccctccccaCTCTCATACAACTCTTCCTTATCTTACAGGACTTGGCTTCAATGTCACCTTAACTGGAAGCTTCTCTCCCTCTCCAGAAGAGCTTCCCATTGCACTTGATGCATGCACTATTATTTGATCATTTTTGAGTTACAGTCCAAGTCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTTTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGGTCCAGCTAGAAGTGACAAAAAGAC i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55111886 417 + 185818997 GGGCAAAACTCCATA---------TACTGTCTCTACAAAGCATTCCTGCCACACTTAATTCACCATTCCCTGAAC-AAAATGTGACATCTTCATTGTCCAGGTCTGTACAGTGCTGGTTTCCTTGCCTGAGCAGCTCACTccatcccatcccagcccattcctcatccctccacctcctccttccctcccCACTCTCATACAACTCTTCCTCATCTTTCAGAACCTGGCTTTAATGTCACCTTAACTGGAAGCTTCTCTCACCCTCCAGAAGAGCTTCCCATTGCACTTGATGCATGCACTATTATTTGATCATTTTTGAGTTATAGTCCAAGTCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGATCCAGCTGG-AGTGACAAAAATAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127704239 417 - 192294377 GGGCAAAACTCCATA---------TACTGTCTCTACAAAGCATTCCTGCCACACTTAATTCACCATTCCCTGAAC-AAAATGTGACATCTTCATTGTCCAGGTCTGTACAGTGCTGGTTTCCTTGCCTGAGCAGCTCACTccatcccatcccagcccattcctcatccctccacctcctccttccctcccCACTCTCATACAACTCTTCCTCATCTTTCAGAACCTGGCTTTAATGTCACCTTAACTGGAAGCTTCTCTCACCCTCCAGAAGAGCTTCCCATTGCACTTGATGCATGCACTATTATTTGATCATTTTTGAGTTATAGTCCAAGTCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGATCCAGCTGG-AGTGACAAAAATAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8960378 428 - 10413719 AGGCAAAATTCCATACAAGCAAATTACCGTCTCTCCAAAGCATTCCCACCATACTTAATTCACCATTCCCTGAACAAAAATGTGCCATCTTCATTGTCCAGGTCTTTACAGTGCTGGTTTCCCTGCCTGGGCAGCTCCCTCCATCCCATCCCAGCccattccccatccctccacctcccccttccctctccactctcatacaactcttcctcatctttcaggacctggcttcaatgtcaccttaactggaagcttctctcaccctctggaagagtttcccattgcatttgatgcatgtactgttatttgaccattTTTGAGTCATAGTCCAAGTCTTTTTGTACCTGAATAAGATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCTGAAGTCTTTCATGGTAGATTCAGCTGGAAGTGACAAAAAGAC i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 49559 427 - 113584 AGGCAAAATTCCAGACAAGCAAATGACCATTTCTCCAAAGCATTCCTGCCACACTTAATTCACAATTCTCTGAAC-AAAATGTGCCATCTTCATTGTTCAGGTCTGTACAGTGCTGGTTTCCCTGCCTGGGCTGCTCACTccatcccatcccagcccattcctcatccTTTCAcctctcccttccctccccactctcatacaactcttcctcatctttcaggacctggcttcaatgtcaccttaactggaagcttctctcaccctccagaagagcttctcactgcacttgatgcatgcactatcatttgatcatttttgagttacagtgcaagtctttttgtatctgaataacatgttgcccagtcagtctctcttcctggactctgaagtctttcatggtagATCCAGGTGGAAGTGACAAAAAGAC i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124160974 417 - 127223203 GGGCAAAACTCCAAA---------TACTGTCTCTACAAAGCATTCCTGCCACACTTAATTCACCATTCCCTGAAA-AAAATGTGCCATCTTCATTGTCCAGGTCTGTACAGTGCTGGTTTCCCTGCCTGGGCTGCTCACTccatcccatcccagcccattcctcatccctccACGTCCcccttccctccccactctcatacaactcttcctcatctttcaggacctggcttcaatgtcaccttaactggaagcttctctcaccctccagAAGAGCTTCCCATTGCACTTGATGCATGCACTATTATTTGATCATTTTTGAGTTATAGTCCAAGTCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGATCCAGCTGG-AGTGACAAAAATAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 53068 417 - 148006 GGGCAAAACTCCATA---------TACTGTCTCTACAAAGCATTCCTGCCACACTTAATTCACCATTCCCTGAAC-AAAATGTGCCATCTTCATTGTCCAGGTCTGTACAGTGCTAGTTTCCTTGCCTGAGCAGCTCACTCCATCCCATCCCAGCCCATTCCTCAtccctccacctcctccttccctccccactctcatacaactcttcctcatctttcagaacctggctttaatgtcaccttaactggaagcttctctcaccctccagAAGAGCTTCCCATTGCACTTGATGCATGCACTATTATTTGATCACTTTTGAGTTATAGTCCAAGTCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGATCCAGCTGG-AGTGACAAAAATAC i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 770540 427 + 1536524 AGGCAAAATTCCATACAAGCAAATTACTGTCTCTCCAAAGCATTCCCACCACACTTAATTCACCATTCCCTGAAC-AAAATGTGCCATCTTCCTTGTCCAGGTCTGTACAGTGCTGGTTTTCCTGCCTGGGCTGCTCACTCCATCCCATCCCAGCccattccccatccctctgcctcccccttcccttcccactctcatacaactcttcctcatctttcaggacctggcttcaatgtcaccttaactggaagcttctctcaccctacagaagagcttcccattgcacttgatgcatgtactgttatttgaccattTTTGAGTCATAGTCCAAGTCTTTTCGTACCTGAATAACATGCTGCCCAGTCAGTCTCTCTTCCTGGTCTCTGAAGTCTTTCACGGTAGCTTCAGCTGGAAGTGACAAAAAGAC i colAng1.NW_012116633v1 C 0 I 486 s calJac3.chr2 1442859 421 + 204313951 TGGCAAAATTCCATACAAGCAAATTACTGTCTCTCCAAAGtattcctgccacacttaattcagcattccctgaag-aacatgtgccatcttaattgtccaggtctttacagagctgctttccctgccgggaa----cgctccatcccATCCCAGCCCACTCCCCATGCCTCCACCTCCCCCTTCCCTCCCCACTCTCATACAACTTTTCCTCATCTTTCAAACCCCGGCTTTAACATCACCTTATCTAGAAGCTGCCCTCACTCCCCAGAAGTGCTTCCCACTGCTCTTGAGGCATGCACTATTATTTGATCATTATTGAGTTATTGTCCAAGTCTTTTTGTACCTGAGTAACATGCTGCCCAGTCAG--TCTCTTCCTGGACTCTGAAGTCTTTCATGGTAAATCCAGCTGGAAGTGACATAAAGAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 173844 418 + 13147851 AGACAAAATTCCATACAAGCAAATTACTGTCTCTCCAAAGTATTCCTGCCACACTTAATTCACCATTCCCTGAAC-AAAATGTGCCGTCTTAATTGTCCAGGCCTTCACAGAGCTGCTTTCCCTGCTGGGAC----CACTCCATCCCACCTCAG-CCACTCCCCATGCCTCCACCT-CGCCTTCCCTACCCACTCTCATACAGCTCTTCCTCATCCTCCAGAACCCGGCTGCAGCATCACCTCATCTGGAAGCTGCTCTCACCCTCCAGAAGTGCTTCCCATTGCACTTGACGCATGCACTATTATTTGATCACTTCTGAGTTATCGTCCAAGTC-TTTTGTACCTGAATAACATGCTGCCCAGTCAG--TCTCTTCCTGGACTCTGAAGTCTTTCATGGTAGATCCAGCTGGAAGTGACAAAAAGAC i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 298826 419 + 373793 GGGCGAAATTCTATACAAGCAAATTACTCTCTCTCCAGAGTATTCCTGCCACACTTAATTCACCATTCCCTGTGC-AAAATGTGCCATCTTAATTGTCCAGGCCTTCACAGAGCTGCTTTCCCTGCCAGGAA----CACTCTATcccaccccag-ccgctccccatgcctccacctctcccttccctccccACTCTCATACAGCTGCTCCTCATCCTCCAAACCCCGGCTTCAGTGTCACCTCATCTGGAAGCTGCTCTCGCCCTCCAGAAGTGCTTCCCATTGCACTGGACGCATGCACTATTATTTGATCACTTTTGAGTTATTGTCCAAATC-TTTTGTACCTGAATAACCTGCTGCCCAGTCAG--TCTCTTCCTGGACTCTAAAGTCTTTCATGGTAGATCCAGCTGGAAGTGACAAAAAGAC i cebCap1.NW_016108107v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e nomLeu3.chr17 46805845 1100 - 99891981 I a score=-201.000000 s hg38.chr3_KI270784v1_alt 36633 4 + 184404 A---TTT s panTro5.chr1 222320319 4 + 228573443 A---TTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 56732381 7 + 162613886 ATTCTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4236623 4 + 4392246 A---TTT i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55112303 7 + 185818997 ATTCCTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127704656 7 - 192294377 ATTCCTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8960806 7 - 10413719 Attcttt i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 49986 7 - 113584 ATTCTTT i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124161391 7 - 127223203 ATTCCTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 53485 7 - 148006 ATTCCTT i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1443280 4 + 204313951 ATTC--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 174262 4 + 13147851 ATTC--- i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 299245 4 + 373793 ATTC--- i cebCap1.NW_016108107v1 C 0 I 25 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e colAng1.NW_012116633v1 770967 486 + 1536524 I e nomLeu3.chr17 46805845 1100 - 99891981 I a score=15115.000000 s hg38.chr3_KI270784v1_alt 36637 21 + 184404 A----AAAAAAAAAAAAAA--------------------------------GAGGGA- s panTro5.chr1 222320323 25 + 228573443 a----aaaaaaaaaaaaaaa----------------------------aaaGAGGGA- i panTro5.chr1 C 0 C 0 s panPan2.chr7 56732388 25 + 162613886 a----aaaaaaaagaaaaaa----------------------------aaaGAGGGA- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4236627 22 + 4392246 A----AAAAAAAAAAAAAA-------------------------------AGAGGGA- i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55112310 34 + 185818997 G----aaaaaaaaaaaacaagaaaataaa-------------------aaaGAGGGA- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127704663 34 - 192294377 G----aaaaaaaaaaaacaagaaaataaa-------------------aaaGAGGGA- i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8960813 28 - 10413719 -----------------------------tttttttttttttttttttAAAGAGGGA- i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 49993 26 - 113584 a----aaaaaaaaaaaaaaaa---------------------------aaaGAGGGA- i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124161398 36 - 127223203 Ga--aaaaaaaaaaaaacaagaaaagaaa-------------------aaaGAGGGA- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 53492 35 - 148006 G---aaaaaaaaaaaaacaagaaaagaaa-------------------aaaGAGGGA- i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1443284 20 + 204313951 -TTG-AAAAATA------------------------------------AAAGAAGGAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 174266 21 + 13147851 -TTGAAAAAATA------------------------------------AAAGAAGGAA i saiBol1.JH378167 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e cebCap1.NW_016108107v1 299249 25 + 373793 I e colAng1.NW_012116633v1 770967 486 + 1536524 I e nomLeu3.chr17 46805845 1100 - 99891981 I a score=37902.000000 s hg38.chr3_KI270784v1_alt 36658 8 + 184404 TGACACAG s panTro5.chr1 222320348 8 + 228573443 TGACACAG i panTro5.chr1 C 0 C 0 s panPan2.chr7 56732413 8 + 162613886 TGACACAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4236649 8 + 4392246 TGACACAG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46806945 8 - 99891981 TGACACAG i nomLeu3.chr17 I 1100 C 0 s rheMac8.chr3 55112344 8 + 185818997 TGACACAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127704697 8 - 192294377 TGACACAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8960841 8 - 10413719 TGACACAG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 50019 8 - 113584 CGACACAG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124161434 8 - 127223203 TGACACAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 53527 8 - 148006 TGACACAG i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1443304 4 + 204313951 TGAC---- i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 174287 4 + 13147851 TGAC---- i saiBol1.JH378167 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e cebCap1.NW_016108107v1 299249 25 + 373793 I e colAng1.NW_012116633v1 770967 486 + 1536524 I a score=283873.000000 s hg38.chr3_KI270784v1_alt 36666 39 + 184404 ACAGACATCAGCACTT-AAAAGTTTTAAACGATATGTGAA s panTro5.chr1 222320356 39 + 228573443 ACAGACATCAGCACTT-AAAAGTTTTAAATGATACGTGAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 56732421 39 + 162613886 ACAGACATCAGTACTT-AAAAGTTTTAAATGGTATGTGAA i panPan2.chr7 C 0 I 4 s gorGor5.CYUI01015383v1 4236657 39 + 4392246 ACAGACATCAGCACTT-AAAAGTTTTAAACGATATGTGAA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46806953 39 - 99891981 ACAGACATCAGTACTT-AAAAGTTTTAAATGGTATGTGAA i nomLeu3.chr17 C 0 I 4 s rheMac8.chr3 55112352 39 + 185818997 ACATACATCAGTACTT-AAAAGTTTTAAATGGTATGTGAA i rheMac8.chr3 C 0 I 4 s macFas5.chr3 127704705 39 - 192294377 ACAGACATCAGTACTT-AAAAGTTTTAAATGGTATGTGAA i macFas5.chr3 C 0 I 4 s macNem1.NW_012013022v1 8960849 39 - 10413719 ACAGACATCAGTACTT-AAAAGTTTTAAATCGTATGTGAA i macNem1.NW_012013022v1 C 0 I 4 s cerAty1.NW_012005081v1 50027 40 - 113584 ACAGATATCAGTACTTAAAAAGTTTTAAATGGTATGTGAA i cerAty1.NW_012005081v1 C 0 I 4 s chlSab2.chr21 124161442 39 - 127223203 ACAGACATCAGTACTT-AAAAGTTTTAAATGGTATGTGAA i chlSab2.chr21 C 0 I 4 s manLeu1.NW_012100344v1 53535 39 - 148006 ACAGACATCAGTACTT-AAAAGTTTTAAATGGTATGTGAA i manLeu1.NW_012100344v1 C 0 I 4 s calJac3.chr2 1443308 39 + 204313951 AAGGACATCAGTATTT-AGAAGTTTTAAATGGTATGTGGA i calJac3.chr2 C 0 I 4 s saiBol1.JH378167 174291 39 + 13147851 ATGGACATCAATACTT-AGAAGTTTTAAATGGTATGTGGA i saiBol1.JH378167 C 0 I 4 s cebCap1.NW_016108107v1 299274 39 + 373793 AGGGACATCAGTACTT-AGAAGTTTTAAATGGTATGTGGA i cebCap1.NW_016108107v1 I 25 I 4 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e colAng1.NW_012116633v1 770967 486 + 1536524 I a score=2184057.000000 s hg38.chr3_KI270784v1_alt 36705 280 + 184404 AAACAAAATTTAAGGGCTTCTAGGAGAAATGTAGGAGGGAAGGTGTTACTGGGAAATATGATAGAAGGTTAAt----------ttttattttattttat-ttttagagaaagggtcttgctctatcacctaggctggactgcagtggtgcaatcacagttaactgcagcctcaacctccagggcttgagcaatattcccatctAAtttttattttgtttaagaaatgcagtcttgctc--ttagcaaagctaaagtgcaatggtgtgatcatagcttac---tgcagcctcaacct s panTro5.chr1 222320395 275 + 228573443 AAACAAAATTTAAGGGCTTCTAGGAGAAATGTAGGAGGGAAGGTGTTACTGGGAAATATGATAGAAGGTTAAt----------ttttattttatttt------tagagaaagggtcttgctctatcgcctaggctggactgcagtggtgcaatcacagttaactgcagcctcaacctccagggcttgagcaatattcccatctAAtttttattttgtttaagaaatgcagtcttgctc--ttagcaaagctaaagtgcaatggtgtgatcatagcttac---tgcagcctcaacct i panTro5.chr1 C 0 C 0 s panPan2.chr7 56732464 281 + 162613886 AAACAAAATTCAAGGGCTTCTAGGAAAAATGTAGGAGGGAAGGTGTCACTGGGAAATATGATA-AAGGGTAAt----------ttttattttattttat-tttttgagaaagggtcttgctctattgccaaggctgtactgcagtagtgcgatcacagctcactgcagcctcaacctcctgggctcaagaaatcttcccacctGAtttttattttatttaagaaacacagtcttactctgttaccaaagctggagtgcagtggtatgatcatagcttac---tgcagcctcaacct i panPan2.chr7 I 4 C 0 s gorGor5.CYUI01015383v1 4236696 280 + 4392246 AAACAAAATTTAAGGGCTTCTAGGAGAAATGTAGGAGGGAAGGTGTTACTGGGAAATATGATAGAAGGTTAAt----------ttttattttattttat-ttttagagaaagggtcttgctctatcgcctaggctggactgcagtggtgcaatcacagttaactgcagcctcaacctccagggcttgagcaatattcccatctAAtttttattttgtttaagaaatgcagtcttgctc--ttagcaaagctaaagtgcaatggtgtgatcatagcttac---tgcagcctcaacct i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46806996 275 - 99891981 AAACAAAATTCAAGGGCTTCTAGGAGAAATGTAGGAGGGAATGTGTTACTGGGAAATATGATAGACGGTTAAt----------ttttattttatttt------tagagaaagggtcttgctctatcgcctagactggactgcagtggtgcaatcacagttaactgcagcctcaacctccagggctcgagcaatattcccatctAATGtttattttatttaagaaacacagtcttgctc--ttaccaaagctaaagtgcagtggtataatcatagcttac---tgcagcctcaacct i nomLeu3.chr17 I 4 C 0 s rheMac8.chr3 55112395 280 + 185818997 AAACAAAATGCAAGGGCTTCCAGCAGAAACATAGGAGGGAAAGTGTTACTAGGAAATATAACAGAAGGTTACt----------ttttattttattttat-ttttagaaaaagggtcttgctctatcgcctaggctgggctgcagtggtgcaatcacagttaactgaagcctcaacctccagggctccagcaatattcccatctAAtttttattttatttaagaaacacagtcttgctc--ttaccaaagctaaagtgcagtggtgtgatcatagcttac---tgcagcctcaacct i rheMac8.chr3 I 4 C 0 s macFas5.chr3 127704748 280 - 192294377 AAACAAAATGCAAGGGCTTCCAGCAGAAACATAGGAGGGAAAGTGTTACTAGGAAATATAACAGAAGGTTACt----------ttttattttattttat-ttttagaaaaagggtcttgctctatcgcctaggctggactgcagtggtgcaatcacagttaactgaagcctcaacctccagggctcgagcaatattcccatctAAtttttattttatttaagaaacacagtcttgctc--ttaccaaagctaaagtgcagtggtgtgatcatagcttac---tgcagcctcaacct i macFas5.chr3 I 4 C 0 s macNem1.NW_012013022v1 8960892 284 - 10413719 AAACAAAATTCAAGGGCTTCTAGGAAAAACGTAGGAGGGATGGTGTCACT-GGGAATATGATAAAGGGTTAAt----------ttttagtttattttgt-tttttgagaaagggtcttgctctgtcgcctcggctgtactgcagtggtgcaatcacagctcactgcagccttaacctcctgggcttgagcaatcttcccatctAAtttttattttatttaagaaacgcagtcttactctgttaccaaagctggagtgcagtggtgtgatcatagcttacaaatatagcctcaacct i macNem1.NW_012013022v1 I 4 C 0 s cerAty1.NW_012005081v1 50071 290 - 113584 AAACAAAATTCAAGGGCTTCTAGGAGAAACATAGGAGGGAACGTGTTACTGGGAAATATGATAGAAGGTTAATttttattttattttattttattttat-tttTAgagaaaggatcttgctctatcgcctaggctggactgcagtggtgcaatcacagttaactgcagcctcaacctccacggttcaagcaatattcccatctAAtttttattttatttaagaaacacagtcttgctc--ttaccaaagctaaagtgtagtggtgtgatcatagcttac---tgcagcctcgacct i cerAty1.NW_012005081v1 I 4 C 0 s chlSab2.chr21 124161485 280 - 127223203 AAACAAAATGCAAGGGCCTCCAGCAGAAACGTAGGAGGGAAAGTGTTACTAGGAAATATAACAGAAGGTTACt----------tttaattttattttat-ttttagaaaaagggtcttgctctatcgcctaggctggactgcagtggtgcaatcacagttaactgaagcctcaacctccagggctcgagcaatattcccatctAAtttttattttatttaagaaacacagtcttgctc--ttaccaaagctaaagtgcagtggtgtgatcatagcttac---tgcagcctcaacct i chlSab2.chr21 I 4 C 0 s manLeu1.NW_012100344v1 53578 280 - 148006 AAACAAAATGCAAGGGCTTCCAGCAGAAACGTAGGAGGGAAAGTGTTACTAGGAAATATAACAGAAGGTTACT----------TTTTATTTTATTTTAT-TTTTAGAAAAAGGGTCTTGCTCTATCGCCTAGGCTGGGAAGCAGTGGGGCAATCACAGTTAACTGAAGCCTCAACCTCCAGGGCTCGAGCAATATTCCCATCTAAtttttattttatttaagaaacacagtcttgctc--ttaccaaagctaaagtgcagtggtgtgatcatagcttac---tgcagcctcaacct i manLeu1.NW_012100344v1 I 4 C 0 s colAng1.NW_012116633v1 771453 276 + 1536524 AAACAAAATTCAAGGGCTTCTAGGAAAAACATAGGAGGGATGGTGTCACT-GGGAATATGATAAAGGGTTAAt---------------ttttattttat-tttttgagaaagggtcttgctctgtcgcctaggctgtactgcagtggtgcgatcacagctcactgcagccttaacctcctgggctagagcaatattccCATTTAAtttttattttatttaagaaacgcagtcttactctgttaccaaagctggagtgcagtggtgtgatcatagcttac---tgtagcctcaacct i colAng1.NW_012116633v1 I 486 C 0 s calJac3.chr2 1443351 281 + 204313951 AAGCAAAACTCAAGAGCTTCTAGGAAAAACATAGGAGGGAAGGTGTTACTGGGAAATATGCTAAAGAGTTCAT----------GtttattttactttatatttttgagaaagaatcttgctctatcgccttggctggactgcaatggtaccatcacagctcactgcagcctcagcctccagaggttcagccatcttccATCCTAAtttttatcttatttaagaaacacagtcttactg--tgactaaggctggagtgcagtggtatgatcacagctcac---tgcagcctcagcct i calJac3.chr2 I 4 I 1636 s saiBol1.JH378167 174334 281 + 13147851 AAGCAAAACTCAAGAGCTTCTAGGAAAAACACAGGAGGGAAGGCATTACTGGGAAATATGCTAAAGAGTTAAT----------Gtttattttattttacgtttttcagaaagaatcttgctctattgccttggctggactgcagtggtaccctcacagctcactgcagcctcaacctccagagcttcagcaatcttccaacctaatttttatcttatttaagaaacacagtcttactg--ttaccaaagctggagtgcagtggtgtgatcatagcttac---tgcagcctcagcct i saiBol1.JH378167 I 4 C 0 s cebCap1.NW_016108107v1 299317 279 + 373793 AAGCAAAATTCAAGAGCTTCTAGGAAAAACATAGGAGGGAAGGCGTTACTGGAAAATATGCT--AGAGTTAAT----------GTTCAttttattttatgtttttgagaaagaatcttgctctatcgccttggctggactgcagtggtaccatcacagctcactgcagcctcaacctccagagcttcagcaatcttccAATCTAATGTTTATTTTATTTAAGAAATGCAGTCTTActg--ttaccaaagctggagtgcagcggtgtgatcatagcttac---tgtagcctcagcct i cebCap1.NW_016108107v1 I 4 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I a score=1113551.000000 s hg38.chr3_KI270784v1_alt 36985 164 + 184404 tctagactcaagtgatcctccagtcttagcctccccagtagctcggactacaggtgtgcactgcaacgtgtagctca--tttttttttt---ttaatttttagtagagacaaagtgtcacta-tgttgaccaggttggtggtgatctcctacactcaggcagttctctca s panTro5.chr1 222320670 163 + 228573443 tctagactcaagtgatcctccagtcttagcctccccagtagctcggactacaggtgtgcactgcaacctgtagctc---tttttttttt---ttaatttttagtagagacaaagtgtcacta-tgttgaccaggttggtggtgatctcctacactcaggcagttctctca i panTro5.chr1 C 0 C 0 s panPan2.chr7 56732745 162 + 162613886 cctaggctcaagtgatcctccagtctcagcctccctaggagctgggactacaggtgtccaccacaatgtccagctc----atttttttt---ttaattttcagtagagacaaagtgtcatta-tgttgaccaggctgatggtaatctcctaccctcaagcagttctccca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4236976 164 + 4392246 tctagactcaagtgatcctccagtcttagcctccccagtagctgggactacaggtgtgcactgcaacgtgtagctca--tttttttttt---ttaatttttagtagagacaaagtgtcacta-tgttgaccaggttggtggtgatctcctacactcaggcagttctctca i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46807271 166 - 99891981 tctaggctcaagtgatccttcagtcttagcctccccagtagctgggactacaggtgtgcactgcaatgtgtagctcatttttttttttt---ttaatttttagtagagacaaagtgttgcta-tgttgaccaggctggtggtgatctcctacacgcaggcagttctccca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55112675 162 + 185818997 tctaggctcaagtgatcctccagtcttagcctccccagtacctgggactataggtgtacagtgcaatgtgtagctca--attttttttt-----aatttttagtagagacaaagtgtcgcta-tgttgaccaggctggtggtgatctcccacactcaggcagtcctccca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127705028 162 - 192294377 tctaggctcaagtgatcctccagtcttagcctccccagtagctgggactataggtgtacagtgcaatgtgtagctca--atattttttt-----aatttttagtagagacaaagtgtcgcta-tgttgaccaggctggtggtgatctcccacactcaggcagtcctccca i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8961176 165 - 10413719 cctagggtcaagagatcttctagtctcagcctcccctgtagctgggactacaggtgtgcactacaatgtcaagctca--tttttttttt--ttaaatttttagtagagacaaagtgtcgtta-tgttgaccaggctggtggtaatctcctaccctcaagcagttctccca i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 50361 167 - 113584 tctaggctcaagtgatcctccagtcttagcctccccagtagctgggactacaggtgtacagtgcaatgtgtagctca--tttttttttttttttaatttttagtagagacaaagtgtcgcta-tgttgaccaggctggtggtgatctcccacactcaggcagttctccca i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124161765 161 - 127223203 tctaggctcaagtgatcctccagtcttagcctccccagtacctgggactacaggtgtgcagtgcaatgtgtagctca--at-ttttttt-----aatttttagtagagacaaagtgttgcta-tgttgaccaggctggtggtgatctcccacactcaggcagttctccca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 53858 162 - 148006 tctaggctcaagtgatcctccagtcttagcctccccagtagctgggactataggtgtacagtgcaatgtgtagctca--atattttttt-----aatttttagtagagacaaagtgtcgcta-tgttgaccaggctggtggtgatctcccacactcaggcagtcctccca i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 771729 165 + 1536524 tctaggctcaagtgatcctccagtcttagcctccccagtagctgggactacaggtgtacactacaatgtcaagctca--tttttttttt---taaatttttagtagaagaaaagtgtcgttattgttgaccagattggtggtaatctcctaccctcaagcagttctccca i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 174615 161 + 13147851 cctaggctcaagtgatcctccagtcaca-tctccccagtagctggaaccacaggtgtgcactgcaatgtgcagctca--ttttactttt-----aaattttagcagacacaaagtgccgcta-tgttgaccaggctggtggtgatcccctaccctcaagcagttctccca i saiBol1.JH378167 C 0 I 643 s cebCap1.NW_016108107v1 299596 161 + 373793 cctaggctcaagtgatcctccagtcaca-cctccccagtagctgggaccacaggtgtgcaccataatgtccagctca--ttttattttt-----aaattttagcagagacaaagtgccgcta-tgttgaccaggctggtggtgatcccctaccctcaagcagttctccca i cebCap1.NW_016108107v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1443632 1636 + 204313951 I a score=2595842.000000 s hg38.chr3_KI270784v1_alt 37149 385 + 184404 cctcagccttccaaaatgctgggattacaggtgtcagctgc-------------------------cacacctggcTGA----GGGGGTTAATTTTTAATTATATAAAGAGCTCAAAGCaaatattagaaggagcctaaatgcctccagcagttgactggtactggtaaattgtgatacat-ccatataataaaatattatgcaaccatgaaaaggattaagatagatcaataggtattggcacaaatgtccacgaaatatGAAAATATGAAGTGATGTTCAATCACCATGTACGTATCTTGAAGGATATGGCCCATTTTCTCAACTGCAATTATTTCCTGAGATAAGATTATGGGTCTAAAGAGTGAAGGACATTTTTCACTTAT---TTA----AAAGTATTTATCATTTTTATAATTTA s panTro5.chr1 222320833 385 + 228573443 cctcagccttgcaaaatgctgggattacaggtgtgagctgc-------------------------cacacctggcTGA----GGGGGTTAATTTTTAATTATATAAAGAGCTCAAAGCaaatattagaaggagcctaaatgcctccagcagttgactggtactggtaaattgtgatacat-ccatataataaaatattatgcaaccatgaaaaggattaagatagatcaataggtattggcacaaatgtccacgaaatatGAAAATATGAAGTGATGTTCAATCACCATGTACGTATCTTGAAGGATATGGCCCATTTTCTCAACTGCAATTATTTCCTGAGATAAGATTATGGGTCTAAAGAGTGAAGGACATTTTTCACTTAT---TTA----AAAGTATTTATTATTTTTATAATTTA i panTro5.chr1 C 0 C 0 s panPan2.chr7 56732907 378 + 162613886 cctcagccttccaaagtgctggaattacaggtgtgagctgc-------------------------cacatctggcTGA----GGGGGTTAATTTTTAATTATATAAAGAGCTCAAagcaaatagtagaaggagcctaaatgcctatagcggctg------actggtaaactgtgatacat-ccatataataaaatattatgcaaccatgaaaaggattaagaaagatcaataggtattgtcatagatgtccatgaaatatgaaaatgtgaagtgaTGTCCAATTAGCCT----GTATCTTGAAAAATATGGCCCTTTTTCTCAATAGCAATTATTTCCTGAGATAAGATTATGGGTCTAAAGAGCAAAGGAAAATTTTCACTTCTTTCTTA----AAAATATTTACTATTTTTATAATTTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4237140 383 + 4392246 cctcagccttccaaaatgctgggattacaggtgtgagctgc-------------------------cacacctggcTGA----GGGGGTTAATTtttaat--tataaagagctcaaagcaaatattagaaggagcctaaatgcctccagcagttgactggtactggtaaattgtgatacat-ccatataataaaatattatgcaaccatgaaaaggattaagatagatcaataggtattggcacaaatgtccacgaaatatGAAAATATGAAGTGATGTTCAATCACCATGTATGTATCTTGAAGGATATGGCCCATTTTCTCAATTGCAATTATTTCCTGAGATAAGATTATGGGTCTCAAGAGTGAAGGACATTTTTCACTTAT---TTA----AAAGTATTTATTATTTTTATAATTTA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46807437 378 - 99891981 cctcagccttccaaagtgctgggattacaggtgtgagctgc-------------------------cacacctggcTGA----GGGGGTTAATTTTTAAT--TATAAAGAGCTCAAAGCaaatattagaaggagcctaattgcctacagcagctg------actggtaaattgtgatacat-ccatataataaaa---tatgtaaccatgaaaaggattaagacagatcaataggtattggcacaaatgtccatgaaatatgaaaatgtgaagtgaTGTTCAATCACCGTGTATGTATCTTGAAGGATATGGCCCATTTTCTCAATAGCAATTATTTCCTGAGATAAGATTATGGGTCTAAAGAGTGAAGGAAATTTTTCACTTCT---TTATTTTAAAGTATTTACTATTTTTATAATTTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55112837 407 + 185818997 cctcaactttccgaagtgctgggattacaggT-TGACCTGCCTATAACACCACACAGGTGTGACCTCACACCTGGCTGA----GGGGGTTAACTTTTAATTATATAaagagctcaaaggaaatattagaaggagcctaaatgcctacagcagctg------atgagtaaactgtgatacat-ctacataacaaaatattatgcaaccatgaaaagcattaagatagatcaataggtattggcacaaatgtccacgaaacatgaaaatgtgaagtgaTGTTCAATTACCATGTATGTATCTTGACGGACATGGCCCATTTTCTCAATAGCAATTATTTCCTGAGATAAGATTATGGGTCTAAAGACTGAAGGAAATTTTTCACTTAT---TTATTTAAAATTATTTACTATTTTTATAATTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127705190 407 - 192294377 cctcaactttccaaagtgctgggattacaggT-TGACCTGCCTATAACACCACACAGGTGTGACCTCACACCTGGCTGA----GGGGGTTAACTTTTAATTATATAaagagctcaaaggaaatattagaaggagcctaaatgcctacagcagctg------atgagtaaactgtgatacat-ctacataacaaaatattatgcaaccatgaaaagcattaagatagatcaataggtattggcacaaatgtccacgaaatatgaaaatgtgaagtgaTGTTCAATTACCATGTATGTATCTTGACGGACATGGCCCATTTTCTCAATAGCAATTATTTCCTGAGATAAGATTATGGGTCTAAAGACTGAAGGAAATTTTTCACTTAT---TTATTTAAAAGTATTTACTATTTTTATAATTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8961341 383 - 10413719 cctcagccttccagagtgctgcgattacaggtgtgagctgc-------------------------cacacctggcTGAGGGGGGGGGTTAATTTTTAATTATATAAAGAGCTCAAAGCaaatattagaaggagcctaaatgcctacagcagttg------acttataaattgtgatacat-ccatataataaaatattatgcaaccatgaaaaggatt----taaagcaataggtattggcatagatattcacaaaatatgaaaatgtgaagtgaCGTCCAATTAGCCTATATGTATCTTGAAGAATATGGCCCATTTTCACAATAGCAATTATTTCCTGAGATAAAATTGTGGGTCTAAAGAGTAAAGGAAATTTTTCACTTGT---TTATTTAAAAGTATTTACTATTTTTATAATTTA i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 50528 382 - 113584 tctcaaccttccgaagtgctgggattacaggtgtgagctgc-------------------------cacacctggcTGA----GGGGTTTAATTTTTAATTATATAAAGAGCTCAAAGCaaatattagaaggagcctaaatgcctacagcagttg------actagtaaattgtgatacat-ccatgtaataaaatatcatgcaaccatgaaaaggattaagatagatcaataggtattggcacaaatgtccacgaaatatGAAAATGTGAAGTTATGTTCAATCACCATGTATGTATCTTGAAGGATATGGCCCATTTTCTCAACAGCAATTATTTCCTGAGATAAGATTATGGGTCTAAAGAGTAAAGGAAAATTTTCACTTCT---TCATTTAAAAATGTTTACTATTTTTATAATTT- i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124161926 408 - 127223203 cctcaaccttccaaagtgctgggattacaggtgtgaCCTGCCTGTAACACCACACAGGTGTGACCTCACACCTGGCTGA----GGGGGTTAATTTTTAATTATATAAAGAACTCAAAGCaaatattagaaggagcctaaatgcctacagcagctg------atgagtaaactgtgatacat-ctatataacaaaatattatgcaaccatgaaaaggattaagatagatcaataggtattggcacaaatgtccacgaaatatgaaaatgtgaagtgaTGTTCAATTACCATGTATGTATCTTGAAGGATATGGCCCATTTTCTCAATAGCAATTATTTCCTGAGATAAGATTATGGGTCTAAAGACTGAAGGAAATTTTTCACTTAT---TTATTTAAAAGTATTTACTATTTTTATAATTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 54020 408 - 148006 cctcaactttccaaagtgctgggattacaggtgtgaCCTGCCTGTAACACCACACAGGTGTGACCTCACACCTCGCTGA----GGGGGTTAACTTTTAATTATATAaagagctcaaaggaaatattagaaggagcctaaatgcctacagcagctg------atgagtaaactgtgatacat-ctacataacaaaatattatgcaaccatgaaaagcattaagatagatcaataggtattggcacaaatgtccacgaaatatgaaaatgtgaagtgaTGTTCAATCACCATGTATGTGTCTTGAAGGATATGGCCCATTTTCTCAATAGCAATTATTTCCTGAGATAAGATTATGGGTCTAAAGACTGAAGGAAATTTTTCACTTAT---TTATTTAAAAGTATTTACTATTTTTATAATTTA i manLeu1.NW_012100344v1 C 0 M 1687 s colAng1.NW_012116633v1 771894 379 + 1536524 cctcagccttccaaagtgctgtgattacaggtgtgagctgc-------------------------cacacctggcTGA----GGGGGTTAATTTTTAATTATATAAAGAACTCAAAGcaaatattagaaggagcctaaatgcctacagcagctg------actgacaaattgtgatacat-ccatataataaaatattatgcaaccatgaaaaggatt----taaagcaataggtattggcatagatgtccacaaaatatgaaaatgtgaagtgaCGTCCAATTAGCCTGTATATATCTTGAATAATATGGCCCATTTTCACAATAACAATTATTTCCTGAGATAAAATTGTGGGTCTAAACAGTAAAGGAAATTTTTCACTTCT---TTATTTAAAAGTATTTACTATTTTTATAATTTA i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 175419 366 + 13147851 cctcagcctcccaaagtactgggattacaggcttgagccac-------------------------tgtgcccggccCA----GGGGGTTAATTTTTAATGATATAAAGAGCTCAAAGCaaatattagaaggagcctaaatgcctacagcagctg------actggtaaattataatacatcccatataataaaacattatgcaaccgtgaaaaggattaagatagatcaataggtattggcacagatgtccatgaaatatGAAAATGACAAGTGATATCCAATTAGCCTGTATGTATCTTGAAGAATATGGC---------------CAATTATTTCCTGAGATAAGA---TGGGTCTACAGAGTGAAGGAAGTTTTTCACGTCT---TTATTTAACAGTATTTACTATTTTTATAATTTA i saiBol1.JH378167 I 643 C 0 s cebCap1.NW_016108107v1 299757 366 + 373793 cctcagccttccaaagtgctgggattacaggtgtgagctgc-------------------------cacacccggcTGA----GGGGGTTAATTTTTAATGATATAAAGAGCTCAAAGCAAGTattagaaggagcctaaatgcctacggtggctg------actggtaaattataatacatcccgtataataaaacattatgcaaccatgaaaaggattaagatagatcaataggtattggcacagatatccatgaaatatGAAAATGACAAGTGATATCCAATTAGCCTGTATGTATCTTGAAGAATATGGC---------------CAATTTTTTCCTGAGATAAGA---TGCATCTAAAGAGTGACGGAAGTTTTTCACTTCT---TTATTTGAAAGTATTTACTATTTTTATAATTTA i cebCap1.NW_016108107v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1443632 1636 + 204313951 I a score=1010175.000000 s hg38.chr3_KI270784v1_alt 37534 182 + 184404 ATAAAA--GATTAAAC----AGATCATTGAATTAGTAAAAGACAAAGTAACTCTATAAATAAATGGAAAAGACACAGATACCccaggcatggtggctcatgcttataatacc-agtactttgggagggggtggt-gggggg-attgcttgaggccaggagttccagaccagcctaagaaacaaagcaagac s panTro5.chr1 222321218 179 + 228573443 ATAAAA--GATTAAAC----AGATCATTGAATTAGTA---GACAAAATAACTCTATAAATAAATGGAAAAGACACAGATACCccaggcatggtggctcatgcttataatacc-agtactttgggagggggtggt-gggggg-attgcttgaggccaggagttccagaccagcctaagaaacaaagcaagac i panTro5.chr1 C 0 C 0 s panPan2.chr7 56733285 183 + 162613886 AAGAGATTAAATAAAT----AGATCATCAAATTAGTAAAAGACACATTAACTCTATAAATAAATGGAGAAGTCACAGACAGCccaggcatggtggctcacacttataatacc-agcactttgggagggggtcg--gggagg-attgcttgagggcaggagttccagaccagcctggaaaacatagcaagac i panPan2.chr7 C 0 I 56 s gorGor5.CYUI01015383v1 4237523 182 + 4392246 ATAAAA--GATtaaac----agatcattgaattagtaaaagacaaagtaactctataaataaatggaaaagacacagataccccaggcatggtggctcatgcttataatacc-agtactttgggagggggtggt-gggggg-attgcttgaggccaggagttccagaccagcctaagaaacaaagcaagac i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46807815 183 - 99891981 ATAAAA--GATTAAAC----AGATCATTGAATTAGTAAAAGACAAACTAACTCTATAAATAAATGGAAATGACATGGACAGCccaggcatggtggctcatgcttgtaatacc-agtactttgggacggggcatt-ggggggaatcgcttgaggccaggagttccagaccagcctaagaaacaaagcaagac i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55113244 182 + 185818997 GTAAAA--GATTAAAC----AGATCATCGCATTAGTAAAAGACAAATTAATTCTATAAACAAATGGAAAAGACACGGACAGCccaggcatggtggctcacacttataatact-agtattttgggaggggttggt-gggggg-attgctggaggccaggagtccccgaccagcctaagaaacaaaggaagac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127705597 182 - 192294377 ATAAAA--GATtaaac----agatcatcgcattagtaaaagacaaattaattctataaacaaatggaaaagacacggacagcccaggcatggtggctcacacttataatact-agtattttgggaggggttggt-gggggg-attgctggaggccaggagtccccgaccagcctaagaaacaaaggaagac i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8961724 185 - 10413719 AT--GA--GATTAAACAAATAGATCATCAAATTAGCAAAATACACATTAACTCTATAAATAAATGGAAAAGACACAGACAGCccaggcatggtggctcacacttacaataccaagcactttgggagagggtggt-ggcagg-attgtttgaggccaggagttccagaccagcctgggaaacatagcaagac i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 50910 178 - 113584 ----AA--GATTAAAC----AGATCATCAAATTAGTAAAAGACAAATTAACCCTATAAATAAATGGAAAAGA-ATGGACACCccagacatggtggctcatgcttataatacc-agtactttgggaggggatggtggggggg-atcgcttgagggcaggagttccagaccagtctaagaaacaaagtaagac i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124162334 182 - 127223203 GTAAAA--GATtaaac----agatcatcgcattactaaaagacaaattaattctataaacaaatggaaaagacacggacagcccaggcatggtggctcacgcttataatact-agtattttgggagggggtggt-gggggg-atcgcttgaggccaggagtcccagaccagcctaagaaacaaaggaagac i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 772273 182 + 1536524 ATAAAA--GATTAAAC----AGATCATCACATTACTAAAAGACAGATTAATTCTATAAATAAATGGAAAAGACACAGACAGCccaggcatggtggctcacacttacaatatg-agcactttgggagagggtggt-aggagg-attgtttgaggccaggagttccagaccagcctgggaaacatagcaagac i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 175785 182 + 13147851 ATACAA--GATTAAATAAATAGATCATTAAATTAGCAAAAGACACATTAACTCT----ATAAACAGAAAAGATATGGACAGCccagccatggtgggtcatgcttataatacc-agcagtttgggagggggcagt-gggagg-atcacttgaggccaggaattccagaccagcctgggaaacatagcaagac i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 300123 186 + 373793 ATACAA--GATTAAATAAATAGATCATCAAATTAGTGAAAGACACATTAACTCTATAAATAAACAGAAAAGACATGGACAGCCCAGCCATAgtggctcatgcttataataac-agccctttgggagggggcagt-gggagg-atcgcttgaggccaggaattccagaccagccagggaaacatagcaagac i cebCap1.NW_016108107v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1443632 1636 + 204313951 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M a score=587604.000000 s hg38.chr3_KI270784v1_alt 37716 134 + 184404 ctcctctctagt--------------aaaaat--aaaaaaataaaaataattggccaggcatagtggcatgtgcctatagtcccaactactgaggtggaag-gatcacctgagcctaggaggtcaaggctgc--agtgagttgaga------ctgtgcc s panTro5.chr1 222321397 134 + 228573443 ctcctctctagt--------------aaaaat--aaaaaaataaaaatagttggccaggcatagtggcatgtgcctatagtcccaactactgaggtggaag-gatcacctgagcctaggaggtcaaggctgc--agtgagttgaga------ctgtgcc i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4237705 134 + 4392246 ctcgtctctagt--------------aaaaat--aaaaaaataaaaataattggccaggcatagtggcatgtgcctatagtcccaactactgaggtggaag-gatcacctgagcctaggaggtcaaggctgc--agtgagttgaga------ctgtgcc i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46807998 130 - 99891981 cttgtctctact--------------aaaaat--taaaaaaaaa------ttggccaggcatagtggcatgtgcctatagtcccaactactgaggtggaag-gatcacctgagcccaggaggtcaaggctgcagagtgagttgaga------ctgtgcc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55113426 129 + 185818997 cttgtctctact--------------aaaaat--taaaaaaaaaa-----ttggccaggcatagtggcatgtgcccataaacccaactactgaggtggaag-gatcacctgagaccaggaggtcaagactgc--agtgagttgaga------ctgtgcc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127705779 129 - 192294377 cttgtctctact--------------aaaaat--taaaaaaaaaa-----ttggccaggcatagtggcatgtgcccataaacccaactactgaggtggaag-gatcacctgagaccaggaggtcaagactgc--agtgagttgaga------ctgtgcc i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8961909 135 - 10413719 gttgtctccact--------------aaaaat--aaaaaataaaa-----atagccagacatggtggcatgtgcctatagtcccagctactgaggtggaag-gatcacttgagtccaggaggtcaaggctgt--ggtgagttgagactctgcctgggcc i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 51088 132 - 113584 ctcgtctgtact--------------aaaaacaataaaacaaaaa-----ttggccaggcatagcggcatgtgcctacagtcccaactactgaggtggaagttatcacctgagcctaggaggtcaaggctgc--agtgagttgaga------ctgtgcc i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124162516 128 - 127223203 gtcgtctctact--------------aaaaat--taaaaa-aaaa-----ttggccaggcatagtggcatgtgcccataaacccacctactgaggtggaag-gatcgcctgagaccaggaggtcaagactgc--agtgagttgaga------ctgtgcc i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 772455 129 + 1536524 actgtctccact--------------aaaaat--aaaaaataaaa-----atagccagacatggtggtatgtgcctatagtcccagctactgaggtggaag-gatcacttgagtccaggaggtcaaggctgt--ggttagttgaga------ctgtgcc i colAng1.NW_012116633v1 C 0 I 1908 s saiBol1.JH378167 175967 143 + 13147851 ctcatctttactgaaaaaaaaaaaaaaaaaaa--aaaaaaaaaaa-----ttagccaggcatggtggcatgtgcctatagtcccagttactgaggtggaag-gatcacctaaacccaggaggtcaaggctgc--agtgatttgaga------gtgtacc i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 300309 124 + 373793 ctcatcttcact-------------------a--aaaataaaaaa-----ttagccaggcgtggtggcatgttcctacagtccctgttactgaggtggaag-gatcacctgaacacaggaggtcaaggctgc--agtgagtcaaga------ccttacc i cebCap1.NW_016108107v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1443632 1636 + 204313951 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M e panPan2.chr7 56733468 56 + 162613886 I a score=389046.000000 s hg38.chr3_KI270784v1_alt 37850 126 + 184404 actacactgaagcctaggagacagagcgagacttcatctcaaaaaaaaaaaaaaa----------gg------acaataaagaaaTAAAGCTAATAAGCTAACATAAGGAAAGATA----AAATATGTGACAAATAggctgggcac s panTro5.chr1 222321531 129 + 228573443 actacactgaagcctaggagacagagcgagacttcatctcaaaaaaaaaaaaaaa--aaa-----GG------ACAATAAAGAAATAAAGCTAATAAGCTAACATAAGGAAAGACA----AAATATGTGACAAATAggctgggcac i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4237839 129 + 4392246 actacactgaagcctaggagacagagcgagacttcatctcaaaaaaaaaaaaaaa--aaa-----gg------acaataaagaaataaagctaataagctaacataaggaaagata----aaatatgtgacaaataggctgggcgc i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46808128 131 - 99891981 actacactcaagcctgagagacagagcaagacttcatctcaaaaaaaaaaaaaaaaaaaa-----gg------acaataaaGATATAAAGCTAATAAGCTAACATAAGGAAAGATA----GAACATGTGACAAACAggccaggtgc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55113555 135 + 185818997 actacactcaagcctgggagacagagcgagacttcatctcaaaaaaagaaaaaaaaaaaa-AAAAGG------ACAATAAAGAAACAAAGCTAATAAGCTAACACAACGAAAGATA----AAACATGTGACAAACAggccaggtac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127705908 134 - 192294377 actacactcaagcctgggagacagagcgagacttcatctcaaaaaaaaaaaaaaaaaaaa--aaagg------acaataaagaaacaaagctaataagctaacacaacgaaagata----aaacatgtgacaaacaggccaggtac i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8962044 131 - 10413719 actacactcaagcctggaagacacagtgagacttagtcttaaaaaaaaaaaaaaaaaaaa------g------acaataaaGAAATAAAGCTAATAAGCTAACAAAAGAAAAGATA---TTAAAATGTGACAAACAggacgggcac i macNem1.NW_012013022v1 C 0 I 1 s cerAty1.NW_012005081v1 51220 132 - 113584 actacactcaagcctgggagacagagcaagacttcatctcaaaaaaaaaaaaaaaaaaga--------------caataaagaaATAAAGCTAATAAGCTAACATAAGAAAACATAAAAAAAAAAGGTGACAAATAggctgggcga i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124162644 136 - 127223203 actacactcaagcctgggagacagagcgagacttcatctcaaaaaaagaaaaaaaaaagaaaaaagg------acaataaagaaacaaagctaataagctaacacaaggaaagata----aaacatgtgacaaacaggccaggtac i chlSab2.chr21 C 0 C 0 s saiBol1.JH378167 176110 94 + 13147851 actgtactcaagcctgggctacaaagcaaaacagggtctcaaaaaaaaaaaGCGG---GG-----GGGGGGGTGCAATAAAGAAATAAAGCTA--------------------------------------------gctgggcac i saiBol1.JH378167 C 0 C 0 s cebCap1.NW_016108107v1 300433 88 + 373793 actatattcaagcctgggcaacagagagagacttggtcttaaaaaaaaaaaaTAT---GG-----GG------GCAATAAAGAAATAAAGCTA--------------------------------------------gctgggcac i cebCap1.NW_016108107v1 C 0 I 22 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1443632 1636 + 204313951 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M e panPan2.chr7 56733468 56 + 162613886 I a score=8868.000000 s hg38.chr3_KI270784v1_alt 37976 3 + 184404 -atg s panTro5.chr1 222321660 3 + 228573443 -atg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4237968 3 + 4392246 -atg i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46808259 3 - 99891981 -gtg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55113690 3 + 185818997 -gtg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127706042 3 - 192294377 -gtg i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8962176 3 - 10413719 -gtg i macNem1.NW_012013022v1 I 1 C 0 s cerAty1.NW_012005081v1 51352 3 - 113584 -gtg i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124162780 3 - 127223203 -gtg i chlSab2.chr21 C 0 C 0 s saiBol1.JH378167 176204 4 + 13147851 agta i saiBol1.JH378167 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e cebCap1.NW_016108107v1 300521 22 + 373793 I e calJac3.chr2 1443632 1636 + 204313951 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M e panPan2.chr7 56733468 56 + 162613886 I a score=58799.000000 s hg38.chr3_KI270784v1_alt 37979 17 + 184404 gctcacagctgtaat-ca s panTro5.chr1 222321663 17 + 228573443 gctcacagctgtaat-ca i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4237971 17 + 4392246 gctcacagctgtaat-ca i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46808262 17 - 99891981 gctcacgcctgtaat-cc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55113693 17 + 185818997 gctcacacctctaat-cc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127706045 17 - 192294377 gctcacacctctaat-cc i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8962179 18 - 10413719 gctcatgcctgtaatccc i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 51355 17 - 113584 gctcatgcctgtaat-cc i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124162783 17 - 127223203 gctcacacctctaat-cc i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1445268 16 + 204313951 gctcacacc-gtaat-cc i calJac3.chr2 I 1636 I 1 s saiBol1.JH378167 176208 17 + 13147851 gctcacacctgtaat-cc i saiBol1.JH378167 C 0 I 1 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e cebCap1.NW_016108107v1 300521 22 + 373793 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M e panPan2.chr7 56733468 56 + 162613886 I a score=480027.000000 s hg38.chr3_KI270784v1_alt 37996 104 + 184404 agcactttgggaggccaaggcgggtagatcac--gagatcaggagttcgagaccagcctgatcaacatggtgaaaccacgtttctactaaaaatacaaa--------aa----ttaac s panTro5.chr1 222321680 104 + 228573443 agcactttgggaggccaaggcgggtagatcac--gagatcaggagttcgagaccagcctgatcaacatggtgaaaccacgtttctactaaaaatacaaa--------aa----ttagc i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4237988 107 + 4392246 agcactttgggaggccgagg-gggtagatcac--gaggtcaggagttcgagaccagcctgatcaacatggtgaaaccacgtttctactaaaaatacaaa--------aattagttagc i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46808279 103 - 99891981 agcactttgggaggctgaggtgggtagatcac--gaggtcaggagttcgagaccagcctgatcaacatggtgaaaccccatctgtact-aaaatacaaa--------aa----ttagc i nomLeu3.chr17 C 0 M 1249 s rheMac8.chr3 55113710 104 + 185818997 agcactttgggaggccgaggcgggtagatcac--gaggtcaggagtttgagaccagcctgatcaatacggtgaaaccccatctctactaaaaatacaaa--------aa----ttagc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127706062 104 - 192294377 agcactttgggaggccgaggcgggtagatcac--gaggtcaggagtttgagaccagcctgatcaatacggtgaaaccccatctctactaaaaatacaaa--------aa----ttagc i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8962197 104 - 10413719 agcactttgggaggctgaggtgggtggatcat--gagttcaggagttcaagaccagcctgatgagtatggtgaaaccctgtctctactaaaaatgcaaa--------aa----ttagt i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 51372 104 - 113584 agcactttgggagggtgaggcgggtagatcac--aaggtcaggagttcgagaccggcctgatcaacatggtgaaaccccgtttctactaacaatacaaa--------aa----ttagc i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124162800 104 - 127223203 agcactttggaaggccgaggcaggtagatcac--gaggtcaggagtttgcgaccagcctgatcaatacggtgaaaccccatctctactaaaaatacaaa--------aa----ttagc i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1445285 114 + 204313951 agcactttgagaggctgagtcaggtggatcactcgaggtctggagtttgagaccatcctgaccaacatggagaaaccctatctctactgaaaatatgaaattagctgaa----ttagc i calJac3.chr2 I 1 C 0 s saiBol1.JH378167 176226 114 + 13147851 agcactttgagaggctgagtcaggtggatcccttgaggttgggagttcgagacaagcctgaccaacatggagaaaccctatttctagtaaaaatacgaaattagccaaa----ttagc i saiBol1.JH378167 I 1 C 0 s cebCap1.NW_016108107v1 300543 105 + 373793 agcacgttgagaggctgagtcaggtggatcacttgaggtccagagttccagaccagtctgaccaacatggagaagccctctctctactaaaaatacaa---------aa----ttagc i cebCap1.NW_016108107v1 I 22 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M e panPan2.chr7 56733468 56 + 162613886 I a score=56267.000000 s hg38.chr3_KI270784v1_alt 38100 12 + 184404 caggcatggtgg s panTro5.chr1 222321784 12 + 228573443 caggcatggtgg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4238095 12 + 4392246 cgggcatggtgg i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55113814 12 + 185818997 caggcgtggtgg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127706166 12 - 192294377 caggcgtggtgg i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8962301 12 - 10413719 caggcatggtgg i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 51476 12 - 113584 caggcgtggtgg i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124162904 12 - 127223203 caggcgtggtgg i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1445399 12 + 204313951 caggtatggtgg i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 176340 12 + 13147851 caggtatggtgg i saiBol1.JH378167 C 0 I 10873 s cebCap1.NW_016108107v1 300648 12 + 373793 caggtatggtgg i cebCap1.NW_016108107v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M e nomLeu3.chr17 46808382 1249 - 99891981 M e panPan2.chr7 56733468 56 + 162613886 I a score=351128.000000 s hg38.chr3_KI270784v1_alt 38112 114 + 184404 catatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggc--acaggttgc-----agtgagccgagatcacaccactgcactccagcctggtcgac s panTro5.chr1 222321796 114 + 228573443 catgtgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggc--acaggttgc-----agtgagccgagatcacaccactgcactccagcctggtcgac i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4238107 114 + 4392246 catgtgcctgtaatcccagctactcagaaggctgaggcaggagaatcgcttgaacctgggaggc--acaggttgc-----agtgagccgagatcacaccactgcactccagcctggtcgac i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55113826 111 + 185818997 tgtgtgcctgtaatctcagctactcaggaggctaaggc---agaattgcttgaaccttggaggc--agaggttgc-----agtgagccaagatcataccactgcactatagcctgggtgac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127706178 111 - 192294377 tgtgtgcctgtaatctcagctactcaggaggctgaggc---agaattgcttgaaccttggaggc--agaggttgc-----agtgagccaagatcataccactgcactatagcctgggtgac i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8962313 113 - 10413719 caggcacctgtaatcccagctattcaggaggctgaggcaggagaattgcttgaacctgggaggc--ggaggttgc-----agtgagccaagatcatgccactgcactccagcct-ggtgac i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 51488 121 - 113584 cgtgtgcctataatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcagagaggttgcagtgtagtgagccgacatcatgccactgcactccagcctgggcaac i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124162916 111 - 127223203 tgtgtgcctgtaatctcagctactcaggaggctgaggc---agaattgcttgaacctgggaggc--agaggttgc-----agtgaaccaagatcataccactgcactagagcctgggcgac i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1445411 114 + 204313951 cgcatgcctgtaatcccacccacttgggagactaaggcaggagaatggcttgaatctaagagaa--ggaggttgc-----agtgagcagagatcgcgccatagcactctagtctggacaac i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108107v1 300660 114 + 373793 tgcatgcctgtaatcacagctactcaggaaactgaggcaggggaatggcttgaatctaagagaa--ggaggttgt-----ggttagcagagatcatgccattgtactccagtctggacaac i cebCap1.NW_016108107v1 C 0 I 76 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M e nomLeu3.chr17 46808382 1249 - 99891981 M e panPan2.chr7 56733468 56 + 162613886 I a score=67811.000000 s hg38.chr3_KI270784v1_alt 38226 31 + 184404 -agagcgagactgtgtct-caaaaaa-----------------------------gaaaaaa-- s panTro5.chr1 222321910 31 + 228573443 -agagcgagactgcatct-caaaaaa-----------------------------gaaaaaa-- i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4238221 31 + 4392246 -agagcgagactgcgtct-caaaaaa-----------------------------gaaaaaa-- i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55113937 31 + 185818997 -agagcgagactgtgtct-caaaaaa-----------------------------aaaaaaa-- i rheMac8.chr3 C 0 I 307 s macFas5.chr3 127706289 31 - 192294377 -agagcgagactgtgtct-caaaaaa-----------------------------aaaacaa-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8962426 31 - 10413719 -agagcaagactctgtct-caaaaaa-----------------------------aaaataa-- i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 51609 31 - 113584 -agagcgagactgcgtct-caaaaaa-----------------------------aaaaaaa-- i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124163027 32 - 127223203 -agagcgtgactgtgtctacaaaaaa-----------------------------aaaaaaa-- i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1445525 63 + 204313951 aagagtgaaacttcatct-caaagaaaGCAAGCAAGCAAGCTAATAAGCTAACATAAGAAAATA i calJac3.chr2 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e cebCap1.NW_016108107v1 300774 76 + 373793 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M e nomLeu3.chr17 46808382 1249 - 99891981 M e panPan2.chr7 56733468 56 + 162613886 I a score=-2372.000000 s hg38.chr3_KI270784v1_alt 38257 3 + 184404 gaa- s panTro5.chr1 222321941 3 + 228573443 gaa- i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4238252 3 + 4392246 gaa- i gorGor5.CYUI01015383v1 C 0 C 0 s macFas5.chr3 127706320 2 - 192294377 -aa- i macFas5.chr3 C 0 I 305 s macNem1.NW_012013022v1 8962457 2 - 10413719 -aa- i macNem1.NW_012013022v1 C 0 I 3 s cerAty1.NW_012005081v1 51640 1 - 113584 --G- i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124163059 3 - 127223203 aaa- i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1445588 3 + 204313951 -TAT i calJac3.chr2 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e cebCap1.NW_016108107v1 300774 76 + 373793 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I e rheMac8.chr3 55113968 307 + 185818997 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M e nomLeu3.chr17 46808382 1249 - 99891981 M e panPan2.chr7 56733468 56 + 162613886 I a score=631.000000 s hg38.chr3_KI270784v1_alt 38260 2 + 184404 TG s panTro5.chr1 222321944 2 + 228573443 TG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4238255 2 + 4392246 tg i gorGor5.CYUI01015383v1 C 0 C 0 s macNem1.NW_012013022v1 8962462 1 - 10413719 -a i macNem1.NW_012013022v1 I 3 I 1 s calJac3.chr2 1445591 2 + 204313951 TA i calJac3.chr2 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e cebCap1.NW_016108107v1 300774 76 + 373793 I e cerAty1.NW_012005081v1 51641 0 - 113584 C e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I e rheMac8.chr3 55113968 307 + 185818997 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M e chlSab2.chr21 124163062 0 - 127223203 C e macFas5.chr3 127706322 305 - 192294377 I e nomLeu3.chr17 46808382 1249 - 99891981 M e panPan2.chr7 56733468 56 + 162613886 I a score=1219.000000 s hg38.chr3_KI270784v1_alt 38262 1 + 184404 G s panTro5.chr1 222321946 1 + 228573443 G i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4238257 1 + 4392246 g i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55114275 1 + 185818997 G i rheMac8.chr3 I 307 C 0 s macFas5.chr3 127706627 1 - 192294377 g i macFas5.chr3 I 305 C 0 s macNem1.NW_012013022v1 8962464 1 - 10413719 a i macNem1.NW_012013022v1 I 1 C 0 s chlSab2.chr21 124163062 1 - 127223203 g i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1445593 1 + 204313951 A i calJac3.chr2 C 0 I 3 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e cebCap1.NW_016108107v1 300774 76 + 373793 I e cerAty1.NW_012005081v1 51641 0 - 113584 C e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M e nomLeu3.chr17 46808382 1249 - 99891981 M e panPan2.chr7 56733468 56 + 162613886 I a score=1502044.000000 s hg38.chr3_KI270784v1_alt 38263 461 + 184404 GTGAC------aaagtaataataggaggtctttcattt----------atcacacagaaaataacttgttaaattataata-cctgtgtgggcgaaggtgcagtgaaatggcca-ttttcttgtagtattagtggtgtttaaaatgtatataagccttccagcataaagcttggaaaTTTt-ttttaaatcatacagacagtgactcattatactgcctcctccaactcctggcctcaagcaatcctcccacctcagcctcccaaagtgctggaat--tacaggctgacagccaccatgcctgaaagctttgcaatttacatcgagggtaataagaatgctcatgccctgtgactcacagtaatctcacttctggaaatttcacctttggatataattcaacctaaacaaaaggtcatatgcacaaaCACAGTGAAAATCTGGGAGTAATTTTTTTCTCTTTTTTTAAaaaaa-tatggaatg s panTro5.chr1 222321947 462 + 228573443 GTGAC------AAAGTAATAATATGAGGtctttcattt----------atcacacagaaaataacttgttaaattataata-cctgtgtgggcgaaggtgcagtgaaatggcca-ttttcttgtagtattagtggtgtttaaaatgtatataagccttccagcataaagcttggaaaTTTt-ttttaaatcatacagacagtgactcattatactgcctcccccaactcctggcctcaagcaatcctcccacctcagcctcccaaagtgctggaat--tacaggctgacagccaccatgcctgaaagctttgcaatttacatcaagggtaataagaatgctcatgccctgtgactcacagtaatctcacttctggaaatttcacctttcgatataattcaacctaaacaaaaggtcatatgcacaaaCACAGTGAAAATCTGGGAGTAATTTTTTTCTCTTTTTTAAAAaaaaatatggaatg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4238258 460 + 4392246 gtgac------aaagtaataatatgaggtctttcattt----------atcacacagaaaataacttgttaaattataata-cctgtgtgggcgaaggtgcagtgaaatggcca-ttttcttgtagtattagtggtgtttaaaatgtatataagccttccagcataaagcttggaaaTTTt-ttttaaatcatacagacagtgactcattatactgcctcctccaactcctggcctcaagcaatcctcccacctcagcctcccaaagtgctggaat--tacaggctgacagccaccatgcctgaaagctttgcaatttacatcaagggtaataagaatgctcatgccctgtgactcacagtaatctcacttctggaaatttcatctttggatataattcaacctaaacaaaaggtcatatgcacaaaCACAGTGAAAATCTGGGAGTAATTTTTTTCTCTTTTTTAAaaaaa--tatggaatg i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55114276 455 + 185818997 GTGAC------AAAG---TAATATGAAGTCTTTTATTT----------ATCACACAGAAAATAACTTGTTAAATTATAATA-CCTGTGCCAGTGAAGGTGCAGTGAAATGGCCA-TTTTCTTGTACTATCAGTGCTGTTTAAATTGTATACAAACCTTCCAGGATAAAGCTTGGAAATTTT-TTTAAAATAAtacagacagtgactcattatactgcctcctccaactcctggcctcaagcagtcctcccacctcagcctcccaaagtgctggaat--tacaggctgacagccaccatgcctgaaagcttggcaatttacatcaagggtaataagaatgcacatacc--gtcactcacagtaatctcacttccggaaatatcatctttggatataattcaacctaaacaaaaggtgatatgcacaaaCACAGTGAAAATCTAGAAGTAATTTTTTTCTCATTTTTTAaaaaa--tatggaatg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127706628 455 - 192294377 gtgac------aaag---taatatgaagtcttttattt----------atcacacagaaaataacttgttaaattataata-cctgtgccagtgaaggtgcagtgaaatggcca-ttttcttgtactatcagtgctgtttaaattgtatacaaaccttccaggataaagcttggaaatttt-tttaaaataatacagacagtgactcattatactgcctcctccaactcctggcctcaagcagtcctcccacctcagcctcccaaagtgctggaat--tataggctgacagccaccatgcctgaaagcttggcaatttacatcaagggtaataagaatgcacatacc--gtcactcacagtaatctcacttccggaaatatcatctttggatataattcaacctaaacaaaaggtgatatgcacaaaCACAGTGAAAATCTGGGAGTAATTTTTTTCTCATTTTTTAaaaaa--tatggaatg i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8962465 474 - 10413719 GTGACAAATG-AAAA---TAGTATGAGGTCTTTTATTTATTAAAAATAATTAAACAGAAAATAACTTGTTAAATTATAATACCCTGTGCTGGCAAAGGTGCAGTGAAATGCGCA-TTTTCTTATCCTATTGGTGATGTTTAAATTGTATATAAGCCTTCCAGGGTAAAGCTTAGCAATTTT-TTAAAAATAAtacagacagtgactcactatactgcctcctccaactcctggcctcaagcaatcctcccacctcaacctcccaaagtgctgggat--tataggccgacagccaccATGACTGaaagctcagcaatttgcatcaagtgtaataagaatgctcatgccctgtgactcacagtaatctcacttctggaaataccatctttggatataattcaacctaaacaaaagctcatacgcacaaaCACAGTGAAAATCTCGGAGTATTTTTTTTTCTCTTTTTAAAaaaat-tgcggaatg i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 51641 451 - 113584 GTGAC------ATAG---TAATATGAGATCTTTTATTT----------ATCATACAGAAAATAACTTGTTA------AATA-CATGTGCCCATGAAGGTGCACTGAAACGGCCA-TTTTCTTGTAGTATTAATGGTGTTTACACTGTATATAAGCCTTCCAGGATAAGGCTTGGAaatttt-tttta---aatacacacagtgattcattatactgcctcctccaactcctggcctcaagtaatcctgccaccttagcctcccaaagtgctggaattatataagctgacagccaccatgcctgaaagctcggcaatttacatcaagggtaataagaacgctcatatcctgtgattcacagtaatctcacttctggaaatatcatctttggatataattcaacctaaacaaaaggtgatatgcacaaaCACAATGAAAATCTGGGAGTAATTTTTTTCTCTTTTTTTAAaaaaa-tacggaatg i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124163063 457 - 127223203 gtgac------aaag---taatatgaagtcttttattt----------atcacacagaaagtaacttgttaaattataata-cctgtgccagtgaaagtgcagtgaaatggcca-ttttcttgtactatcagtggtgtttaaattgtatataaaccttccgggataaagcttggaaatttt-tttaaaataatacagacagtgactcattatactgcctcctccaactcctggcctcaagcaatcctcccacctcagcctcccaaagtgctggaat--tataggctgacagctgccatgcctgaaagcttggcaatttacatcaagggtaataagaatgctcataccctgtcactcacagttatctcacttccggaaatattatctttggatataattcaacctaaacaaaaggtgatatgcacaaaCACAGTGAAAATCTGGGAGTAATTTTTTTCTCATTTTTTAaaaaa--tatggaatg i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1445597 460 + 204313951 GTGACAAAAATAAAG---CAATATGAGGTCttttatttattaaaaataatcaaacaaaaaataactttttaaGTTataataccctgtgccggcaaaggtgcagtgaaatgagca-ttttcttatactattagtggtgtttaaattgtatataagccttccagcgtaaagcttggaaatTTTACAAAAATTGAT----ACAGTTACTCACTATAGAGCCTCCCCCaactcctggcctcaagcaatcctcccacctcagcctcccaaagtggtggaat--tataggccgacagccaccatgcctgAAAGCTGGGCAATTTACATCAAGTGTAATAAGAATACTAATGCCTTGTGACTCACAGTAGTCTCATTTCTGGAAATATCAACTATGGATATAATTCAACCTGTTTCAAAAGTCACATGCACAAACACA-----------GGAGTAATATTTTTCTCTGTTTTAAaaaca--tatggaatg i calJac3.chr2 I 3 C 0 s cebCap1.NW_016108107v1 300850 455 + 373793 GTGACAAAAATAAAG---TAATATGAGGTCT----TTTATTAAAAATAATCAAACAAAAAATAACTTTTTAAGTTATAATACCCTGTGCTAGCAAAGGTGCAGTGAAATGGGCATTTTTTTTATACTATTAGTGGTGTTTAAATTGTATATAAGCCTTCCAGGGTAAAGCTTGGAAATTTT-TAAAAAATGAT----ACAGTTGCTCACTATGCAGCCTCCCCCaactcctggcctcaagcaatcctcccacctcagcctcccaaagtgctggaat--tataggctgacagccaccATGGCTgaaagctgggcaatttacatcaagtttaataagaatgctaatgccctgagactcacagtaatctcatttctggaaatatcacctttggatataattcaacctgaacaaaaggtcatatgcacaaaCACA-----------GGAGTAATATTTTTCTCTG-TTTAAaaaca--tatggaatg i cebCap1.NW_016108107v1 I 76 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M e nomLeu3.chr17 46808382 1249 - 99891981 M e panPan2.chr7 56733468 56 + 162613886 I a score=337291.000000 s hg38.chr3_KI270784v1_alt 38724 77 + 184404 cttcacaaatttgc-atgtcattctttcacagaggccgtgccaatctctctattgttccaacttaagtatgtgtgcta s panTro5.chr1 222322409 73 + 228573443 cttcacaaatttgc-atgtcattctttcacagaggccgtgccaatct----attgttccaacttaagtatgtgtgcta i panTro5.chr1 C 0 C 0 s panPan2.chr7 56733524 77 + 162613886 cttcgcaaatttgc-atgtcattcttgcacagaggccatgcctatctctctattgttccaactttagtatatgtgcta i panPan2.chr7 I 56 C 0 s gorGor5.CYUI01015383v1 4238718 77 + 4392246 cttcacaaatttgc-atgtcattctttcacagaggccatgccaatctctctattgttccaacttaagtatgtgtgcta i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55114731 77 + 185818997 cttcacaaatttgc-atgtcattctttcacagaggccatgccaaactctctattgttccaacttaagtacatgtgcta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127707083 77 - 192294377 cttcacaaatttgc-atgtcattctttcacagaggccatgccaaactctctattgttccaacttaagtacatgtgcta i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8962939 76 - 10413719 cttcacaaatttgcaatgtcattcttgcacagaggccatgccaatctctctat--gttcaactttagtatatgtgcta i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 52092 77 - 113584 cttcacaaatttgc-acatcattctttcacagaggccatgccaatctctctattgttccaacttaagtacgtgtgcta i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124163520 77 - 127223203 cttcacaaatttgc-atgtcattctttcacagaggccatgccaaactctctattgttccaacttaagtacatgtgcta i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1446057 77 + 204313951 cttcacaaatttgc-atgtgattcttgcacagaggccatgccaatttttctattgttccagcttcagtatatgtgcta i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108107v1 301305 77 + 373793 cttcacaaatttgc-atgtcattcttacacagaggccatgccaatctttctattgttccaactttagtatatgtgcta i cebCap1.NW_016108107v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M e nomLeu3.chr17 46808382 1249 - 99891981 M a score=383006.000000 s hg38.chr3_KI270784v1_alt 38801 72 + 184404 ctgaggcaagcaTGAGTAATTTAAGATAGAGTGGTTAAGTGAAATAAGGAAGAATTATGGAGAATTTAAAAA- s panTro5.chr1 222322482 72 + 228573443 ctgaggcaagcaTGAGTAATTTAAGATAGAGTGGTTAAGTGAAATAAGGAAGAATTATGGAGAATTAAAAAA- i panTro5.chr1 C 0 C 0 s panPan2.chr7 56733601 72 + 162613886 ccgaagcaagcaTGAGTAATTTAAGATAAAGTGGTTAAGTGAAATAAGGAAGAGTTACGGGGAATTTAAAAA- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4238795 72 + 4392246 ctgaggcaagcaTGAGTAATTTAAGATAGAGTGGTTAAGTGAAATAAGGAAGAATTATGGAGAATTTAAAAA- i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46809667 72 - 99891981 CTGAAGCAAGCATGAGTAATTTAAGATAGAGTGGTTAAGTGAAATAAGGAAGAGTTACGGGGAATTTAAAAA- i nomLeu3.chr17 M 1249 C 0 s rheMac8.chr3 55114808 72 + 185818997 ctgaagcaagcaTGAGTAATTTAAGATAGAGTGGTTAAGTGAAATAAGGAAGAGATATGGGGAATTTAAAAA- i rheMac8.chr3 C 0 I 1 s macFas5.chr3 127707160 72 - 192294377 ctgaagcaagcaTGAGTAATTTAAGATAGAGTGGTTAAGTGAAATAAGGAAGAGATATGGGGAATTTAAAAA- i macFas5.chr3 C 0 I 1 s macNem1.NW_012013022v1 8963015 72 - 10413719 ccgaagcaagcaTGAGTAATTTAAGATAGGGTGGTTACATGGAATAAGGAAGAGTTATGGGGAATTTAAAAA- i macNem1.NW_012013022v1 C 0 I 1 s cerAty1.NW_012005081v1 52169 72 - 113584 ctgaagcaagcaTGAGTAATTTAAGATAGAGTGGTTAAGTGAAATAAGGAAGAGTTATGGGGAATTTAAAAA- i cerAty1.NW_012005081v1 C 0 I 1 s chlSab2.chr21 124163597 72 - 127223203 ctgaagcaagcaTGAGTAATTTAAGATAGAGTGGTTAAGTGAAATAAGGAAGAGATATGGGGAATTTAAAAA- i chlSab2.chr21 C 0 I 3475 s calJac3.chr2 1446134 71 + 204313951 ctgaagcaagcaTGAGTAATTTAAGATCGAGCGGGTAAGTGAAAGAAGAAAGAGTTATGGGAAATT--ATAAA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108107v1 301382 73 + 373793 ctgaagcaagcaTGAGTAATTTAAGATAGAGTGGGTAAGTGAAATAAGGAAGAGTCATGGGGAATTTAAAAAA i cebCap1.NW_016108107v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M a score=580313.000000 s hg38.chr3_KI270784v1_alt 38873 122 + 184404 TCTATGCTATTTATAggcacctagtaacagctcagtaaatattagctgctacta----------------------------ttATTATTTTTATGGTAATTTCACTCAATTAAAAACTGTCGTTAAAAATTACCATTGTCATGGAACAT s panTro5.chr1 222322554 122 + 228573443 TCTATGCTATTTATAGGCACCTAGTAACAGCTCAGTAAATATTAGCTGCTACTA----------------------------TTATTATTTTTATGGTAATTTCACTCAATTAAAAACTGTCATTAAAAATTACCATTGTCATGGAACAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 56733673 122 + 162613886 TCTATGGTATTTATAGGGATCTCATAACAGCTCAGTAAATATTAGCTGCTACTT----------------------------TTATTATTTTTATGGTAATTCCACTCAATTAAAAATTGTTGCTAAAAATTACCATTGTCATGGAACAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4238867 122 + 4392246 TCTATGCTATTTATAGGCACCTAGTAACAGCTCAGTAAATATTAGCTGCTACTA----------------------------TTATTATTTTTATGGTAATTTCACTCAATTAAAAACTGTCATTAAAAATTACCATTGTCATGGAACAT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46809739 122 - 99891981 TCTATGGTATTTATAggcacctagtaacagctcagtaaatattagctgctacta----------------------------ttATTATTTTTATGGTAATTTCACTCAGTTAAAAATTGTTATTAAAAACTAACATTGTCATGGAATGG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55114881 107 + 185818997 TCTATAGTACTTATAGGCACCTAGTAACAGCTCAGCAAA-------------------------------------------TTATTATTTTTATGGTAATTTCACTCAATTAAAAATTGTCATTAAAAATTACCATTGTCATGGAACAT i rheMac8.chr3 I 1 C 0 s macFas5.chr3 127707233 107 - 192294377 TCTGTGGTACTTATAGGCACCTAGTAACAGCTCAGCAAA-------------------------------------------TTATTATTTTTATGGTAATTTCACTCAATTAAAAATTGTCATTAAAAATTACCATTGTCATGGAACAT i macFas5.chr3 I 1 C 0 s macNem1.NW_012013022v1 8963088 149 - 10413719 -CTATGGTATTTATAGGCACCTAGTAACAGCTCAGTAAATATTAGCTGCtacttttattattattattatttttttttacttttattatttttatggtaatttCACTCAATTAAAAATTGTCACTAAAAATTACCATTGTGATGGAACAT i macNem1.NW_012013022v1 I 1 C 0 s cerAty1.NW_012005081v1 52242 121 - 113584 -CGATGGTATTTATAGGTACCTAGTAATAGCTCAGTAAATATTAGCTGCTACTA----------------------------TTATTATGTTTATGGTAATTTCACTCAATTAAAAATTGTCATTAAAAATTACTATTGTCATGGAACAT i cerAty1.NW_012005081v1 I 1 C 0 s chlSab2.chr21 124167144 107 - 127223203 TCTATGGTACTTATAGGCACCTAGTAACAGCTCAGCAAA-------------------------------------------TTATTATTTTTATGGTAATTTCACTCAATTAAAAATTGTCATTAAAAATTACCATTGTCATGCAACAT i chlSab2.chr21 I 3475 C 0 s calJac3.chr2 1446205 122 + 204313951 TCAATGCTATTTATAGGTACCTAGTAACAGCTCAGAATATATTAGCTGCTACTT----------------------------TTATTCTTTTTATGGTAATTCCACTTCATTAAAAATTGTCATTAAAAATTACCACTGTCATGGAACAT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108107v1 301455 122 + 373793 TCTATGGTATTTATAGGCACATAGTAACAGCTCAGTATATATTAGCTGCTACTT----------------------------TTATTATTTTTATGGTAATTCCACTTATCTAAAAATTGTCGTTAAAAATTACCACTGTCATGGAACAT i cebCap1.NW_016108107v1 C 0 I 639 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M a score=97035.000000 s hg38.chr3_KI270784v1_alt 38995 25 + 184404 AATGTCTCCTACTGTATAATTGT-AG s panTro5.chr1 222322676 25 + 228573443 AATGTCTCCTACTGTATAATTGT-AA i panTro5.chr1 C 0 C 0 s panPan2.chr7 56733795 25 + 162613886 AATGTATCCTACAGTATAACTGT-AA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4238989 25 + 4392246 AATGTCTCCTACTGTATAATTGT-AA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46809861 25 - 99891981 AATGTATCCTACAGTATAATTGT-AA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55114988 25 + 185818997 AATGTACCCTACAGTATAATTGT-AA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127707340 25 - 192294377 AATGTACCCTACAGTATAATTGT-AA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8963237 26 - 10413719 AATGTATCCTACAGTATAATTGTAAA i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 52363 25 - 113584 AATGTACCCTATAGTATAATTGC-AA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124167251 25 - 127223203 AATGTATCCTACAGTATAATTGT-AA i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1446327 25 + 204313951 CCTGTATTTAACAGTATAATTGT-AA i calJac3.chr2 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e cebCap1.NW_016108107v1 301577 639 + 373793 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M a score=18018.000000 s hg38.chr3_KI270784v1_alt 39020 3 + 184404 AAA s panTro5.chr1 222322701 3 + 228573443 AAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 56733820 3 + 162613886 AAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4239014 3 + 4392246 AAA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46809886 3 - 99891981 AAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55115013 3 + 185818997 AAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127707365 3 - 192294377 AAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8963263 3 - 10413719 AAA i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 52388 3 - 113584 AAA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124167276 3 - 127223203 AAA i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1446352 3 + 204313951 AAA i calJac3.chr2 C 0 I 680 s cebCap1.NW_016108107v1 302216 3 + 373793 AAA i cebCap1.NW_016108107v1 I 639 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M a score=416996.000000 s hg38.chr3_KI270784v1_alt 39023 77 + 184404 CAGATACAATttgtcccttggtatat-ggggggattagttccagctctcccatttctgtgtataccaaaatccacgca s panTro5.chr1 222322704 77 + 228573443 CAGATACAATttgtcccttggtatat-ggggggattagttccagctctcccatttctgtgtataccaaaatccacgca i panTro5.chr1 C 0 C 0 s panPan2.chr7 56733823 77 + 162613886 CAGATACAATttgtcccttggtatat-ggggggattggttccagctcctccatttctatgtataccaaaatccacaca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4239017 76 + 4392246 CAGATACAATttgtcccttggtatat-ggggggattagttccagctctcccatttctgtgtataccaaaatcca-gca i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46809889 77 - 99891981 TAGATACAATttgtcccttggtatat-ggggggattaattccagctcccccatttctgtgtataccaaaatccatgca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55115016 77 + 185818997 CAGATACAATttgtcccttggtatat-ggggagattagttccagctaccccatttctgtgtataccaaaatccatgcg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127707368 77 - 192294377 CAGATACAATttgtcccttggtatat-ggggagattagttccagctaccccatttctgtgtataccaaaatccatgcg i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8963266 78 - 10413719 CAGATATAATttgtcccttggtatatgggggagattggttccagctcttccatttctgtgtataccaaattccacata i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 52391 77 - 113584 CAGATACAATttgtcccttggtatgt-ggggggattagttccagctcccccatttctgtgtataccaaaatccaagca i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124167279 77 - 127223203 CAGATACAATttgtccattggtatat-ggggggattagttccagctaccccatttctgtgtataccaaaatccatgcg i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1447035 77 + 204313951 CAGATACAATttgtttcttggtgtat-ggggggattggttccagttcctccatttctgtgtataccaaaatccatgca i calJac3.chr2 I 680 C 0 s cebCap1.NW_016108107v1 302219 77 + 373793 CAGATACAagttgtcccttggtatat-ggggggattggttccagctcctccatttttgtgtataccaaaatccatgca i cebCap1.NW_016108107v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I e manLeu1.NW_012100344v1 54428 1687 - 148006 M a score=1799542.000000 s hg38.chr3_KI270784v1_alt 39100 304 + 184404 tactcaagttttcgaagtcagtcctgtggaatc----------cacata-taACACAA------------------------------------------------ATGGGaaaattagtgaggtgtggtgacaagcacctgtagtcccagctacttgtgaggctgaggcaggaggattgcttgagcccaggaggttgaggctgcagtgagccataattgcaccactgcactccagtctgggcaacagagtgagacAGAAGGTTGACTTTTTAATAGAATTTTTCTGTTCACTTGAAGATATGGTCAGGATTGTGGCATATGAAAATTCTTCATAAAATAACTATCTAATCCAATTAATGCTG s panTro5.chr1 222322781 304 + 228573443 tactcaagttttcgaagtcagtcctgtggaatc----------cacata-taACACAA------------------------------------------------ATGGGaaaattagtgaggtgtggtgacaagcacctgtagtcccagctacttgtgaggctgcggcaggaggattgcttgagcccaggaggttgaggctgcagtgagccataattgcaccactgcactccagtctgggcaacagagtgagacAGAAGGTTGACTTTTTAAtagaatttttctgttcacttgaagatatggtcaggattgtggcatatgaaaattcttcataaaataactatctaatccaattaatgctg i panTro5.chr1 C 0 C 0 s panPan2.chr7 56733900 297 + 162613886 tactcaagttttc-cagtcagtcctggggTATTGAGAGAGA--TATATA-tatataaa------------------------------------------------atgagaaaattagtgaggtgtggtgacaagcacctgtagtcccagctacttgtgaggctgagtcaggaggattgcttgagc--------------ctgcagtgagccataattgcaccactgcactccagtctgggcaacagagtgagacAGAAGGTTGACTGTTTAAtagaatttttctgttgacttgaacatatggtcaggactgtggtatatgaaaattcttcataagataactatctaatccaattaatgctg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4239093 303 + 4392246 cactcaagttttcgaagtcagtcctgtggaatc----------cacata-taACACAA------------------------------------------------ATGGGaaaattagtgaggtgtggtgacaagcacctgtagtcccagctacttgtgaggctgaggcaggaggattgcttgagcccaggaggttgaggctgcagtgagccataattgcaccactgcactccagtctgggcaacagagtgagacAGAAGGTTGACTTTTTAAtagaatttttctgttcacttgaagatatggtcaggattgtggcatatgaaaattcttcataaaataacta-ctaatccaattaatgctg i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46809966 305 - 99891981 tactcaagtttttgaagtcagtcctgtggaatc----------cacatcttaaaaaaa------------------------------------------------atgggaaaattagtgaggtgtggtgacaagcacccgtagtcccagctacttgtgaagctgaggaaggaggactgcttgagcccaggaggttgaggctacagtgagccataagtgcaccactgcagtccagtctgggcaacagagtgagacAGAAGGTTGACTTTTTAATCGAATTTTTCTGTTCACTTGAAGATACGGTCAGGACTGTGGCATACGAAAATTCTTCATAAAATAACTATCTAATCCAATTAATGCTG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55115093 304 + 185818997 tactcaagttttcaaagtcagtcctgtggaatc----------caaata-tTTaaaaa------------------------------------------------atggaaaaattagtgaggtgtggtgacaagcacctgtagtcccagctacctgtgaggttgaggcaggaggactgcttgaacccaggaggttgaggctgcagtgagccataattgcaccactgcagtccagtctgggcaacagagtgagacAGAaggttcactttttaatagaatttttctgttcacttgaagatatggtcaggactgtggcataggaaaattcttcataaaataactatctaatgcaattaatgctg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127707445 304 - 192294377 tactcaagttttcaaagtcagtcctgtggaatc----------caaata-tTTaaaaa------------------------------------------------atggaaaaattagtgaggtgtggtgacaagcacctgtagtcccagctacctgtgaggttgaggcaggaggactgcttgaacccaggaggttgaggctgcagtgagccataattgcaccactgcagtccagtctgggcaacagagtgagacAGAAGGTTCACTTTTTAATAGAATTTTTCTGTTCACTTGAAGATATGGTCAGGACTGTGGCATAGGAAAATTCTTCATAAAATAACTATCTAATGCAATTAATGCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8963344 361 - 10413719 tactcaagttttc-gagtcagtcctgaggTATCGAGatatatatatata-tataaaaaatatatatgtgtgtgtgtgtgtgtgtaaatgtgtgtatatatatatatatGAGaaaattagcgaggtgtggtgacaagcacttgtagtcccagctacttgtgaggctgagtcaggaggattgcttgagcccaggagattgaggctgcagtgagccataattgcaccactgcactccattctgggcaacagagtgagacAGAAGGTTGACTGTTTAAtagaatttttctgttgacttgaagatatagtcaggactgtggcatatgaaaattcttcataagataattatctaatccaattaatcctg i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 52468 286 - 113584 tactcaaatATTCAAAGTGAGTCCTgtggaatc----------c-caca-caaaacaa------------------------------------------------atgggaaaatgagtgaggggtggtgacaagcccctgaagtcccagctacttgtgag-----------------gcttgagcccaggaggttgaggctgcagtgagccataattgcaccactgcactccagtatgggcaacagagtgagacAGAaggttcactttttaatagaatttttctgttcacttgaagatatggtcaggattgtggcataggaaaattcttcataaaataactatctagtccaattaacgctg i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124167356 304 - 127223203 tactcaagtttttgaagtcagtcctgtggaatc----------caaata-tTTaaaaa------------------------------------------------atggaaaaattagtgaggtgtggtgacaagcacctgtagtcccagctacctgtgaggttgaggcaggaggactgcttgagcccaggaggttgaggctgcagtgagccataattgtactactgcagtccagtctgggcaacagagtgagacAGAAGGTTCACTTTTTAATAGAATTTTTCTGTTCACTTGAAGATAAGGTCAGGACTGTGGCATAGGAAAATTCTTCATAAAATAACTATCTAATGCAATTAATGCTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 56116 304 - 148006 TACTCAAGTTTTCGAAGTCAGTCCTGTGGAATC----------CAAATA-TTTaaaaa------------------------------------------------atgggaaaattagtgaggtgcggtgacaagcacctgtagtcccagctacctgtgaggttgaggcaggaggactgcttgaacccaggaggttgaggctgcagtgagccataattgcaccactgcagtccagtctgggcaacagagtgagacAGAaggttcactttttaatagaatttttctgttcacttgaagatatggtcaggactgtggcataggaaaattcttcataaaataactatctaatgcaattaatgctg i manLeu1.NW_012100344v1 M 1687 C 0 s calJac3.chr2 1447112 301 + 204313951 tattcaagttttcgaagtcagacctgtggaatc----------cacata-taGGaaaa------------------------------------------------attagaaaactagtaaactgtggtgacaagcatctctagttgcagctacttgtgaggcagaggc---aggactgcttgagcccagaaggttgaagctgcagtgagccataactgtaccactgcactcccatctgggcaacagagtgagacAGAAGGTTGACTTTTTAATAGAATTTTTCTATTCACTTAAAGATATGGTCAGGATGGTGGCAGATGAAAATTCTTCATACAATAATTATCTAATCCAATTAATGCCG i calJac3.chr2 C 0 I 14456 s cebCap1.NW_016108107v1 302296 304 + 373793 tactcaagtgtttgaagtcagacctgtggaatt----------cacata-taGGaaaa------------------------------------------------attagaaaactagtgagttgtggtgacaagcacctgtagtcccagctacttgtgagtctgaggcaggaggattgcttgagcccaggaggctgaggttgcagtgagccataattgcaccactgcacgcctgtctgggcaacagaatgagaAAGAAGGTTGACTTTTTAATACAAATTTTCtgttcacttgagaatatggtcagaactgcggcatatgaaaatttttcataaaataattgtgtaatccaattaatgata i cebCap1.NW_016108107v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I a score=69696.000000 s hg38.chr3_KI270784v1_alt 39404 13 + 184404 GAATTGGGAACAG s panTro5.chr1 222323085 13 + 228573443 gaattgggaacag i panTro5.chr1 C 0 C 0 s panPan2.chr7 56734197 13 + 162613886 gaattgggaacag i panPan2.chr7 C 0 I 300 s gorGor5.CYUI01015383v1 4239396 13 + 4392246 gaattgggaacag i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46810271 13 - 99891981 GAATTAGGGACAG i nomLeu3.chr17 C 0 I 71 s rheMac8.chr3 55115397 13 + 185818997 gagttggggacag i rheMac8.chr3 C 0 I 71 s macFas5.chr3 127707749 13 - 192294377 GAGTTGGGGACAG i macFas5.chr3 C 0 I 71 s macNem1.NW_012013022v1 8963705 13 - 10413719 gaattgggaacag i macNem1.NW_012013022v1 C 0 I 300 s cerAty1.NW_012005081v1 52754 13 - 113584 gaattgggaacag i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124167660 13 - 127223203 GAGTTGGGGACAG i chlSab2.chr21 C 0 I 71 s manLeu1.NW_012100344v1 56420 13 - 148006 gagttggggacag i manLeu1.NW_012100344v1 C 0 I 71 s cebCap1.NW_016108107v1 302600 13 + 373793 gaattgggaagag i cebCap1.NW_016108107v1 C 0 I 71 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I a score=673286.000000 s hg38.chr3_KI270784v1_alt 39417 150 + 184404 CAGAAGTGTCATCTCAGAGCTACTCA---CAATGAAAGGTGATGTCTGGGGCTCAGGTGTGTTGAGGTCCCCATGCCTGGACTATGGGTGCTGAGTGGGATTTACTTGTCCATCCATTTTCTATATTCCAGCACTGGGAAACTAGGG---------------------------------------------------------------------------------------------------------------------------------------------ACAGTA s panTro5.chr1 222323098 232 + 228573443 cagaaGTGTCATCTCAGAGCTACTCATCACAATGAAAGGTGATGTCTGGggctcaggtgtgttgaggtccccatgcctggactatgggtgctgagtgggatttacttgtccatccattttctatattccagcactgggaaactagggtttatccatcttaataagatgtcattta-----------------------------------------aattccacttcgcaagaacCACA---------------------AATGGAAGAAAGGCCATGAAACCGCAGGACAGTA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4239409 229 + 4392246 cagaaGTGTCATCTCAGAGctactca---caatgaaaggtgatgtctggggctcaggtgtgttgaggtccccatgcctggactatgggtgctgagtgggatttacttgtccatccattttctatattccagcactgggaaactagggtttatccatcttgataagatgtcattta-----------------------------------------aattccacttcgcaagaacCACA---------------------AATGGAAGAAAGGCCATGAAACCGCAGGACAGTA i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46810355 229 - 99891981 CAGAAGTACCATCTCAGAGCTACTCA---CAATGAAAGGTGATCTCTGGGGCTCAGATGTGTTGAGGTCTCCATGCCTGGGATATAGGTGGTGAGTGGGACTTACTTGTCTATCCATTTTCTATATTCCAGCACTGGGAAACTAGGGTTTATACATCTTGATAAGATGTCATTTA-----------------------------------------AATTCCACTTGGCAAGAACCGCA---------------------AATGGAAGAAAGGCCATGAAACCACAGGACAGTA i nomLeu3.chr17 I 71 C 0 s rheMac8.chr3 55115481 229 + 185818997 cagaagtgtcatctcagagctactca---caatgaaaggtgacgtctggggctcaggtgtgttgaggtccctatgcctgggctatgggtgctgagtgggacttacttgtgcatccattttctctattccagcaccaggaaacttgggtttatccatcttgataagatgtcattgaaattccacttggcaagaacCAC-----------------------------------------A---------------------AATGGAAGAAAGGCCATGAAACCACAGGACAGTA i rheMac8.chr3 I 71 C 0 s macFas5.chr3 127707833 229 - 192294377 CAGAAGTGTCATCTCAGAGCTACTCA---CAATGAAAGGtgacgtctggggctcaggtgtgttgaggtccctatgcctgggctatgggtgctgagtgggacttacttgtgcatccattttctctattccagcaccaggaaacttgggtttatccatcttgataagatgtcattgaaattccacttggcaagaacCAC-----------------------------------------A---------------------AATGGAAGAAAGGCCATGAAACCACAGGACAGTA i macFas5.chr3 I 71 C 0 s cerAty1.NW_012005081v1 52767 229 - 113584 cagaaGTGTCATCTCAGAGCTACTCA---CAATGAAAGGtgacgtctggggctcaggtgtgttgagatccccatgcctgggctatggctgcagagtgggacttacttgtccatccattttctctattccagcactgggaaacttgggtttatccatcttgataagctgtcattgaa---------------------attccacttggcaagaacCA--------------------CA---------------------AATGGAAGAAAAGCCATGAAACCACAGGACGGTA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124167744 229 - 127223203 CAGAAGTGTCATCTCAGAGCTACTCA---CAATGAAAGGTGATGTCTGGggctcaggtgtgttgaggtccccatgcctgggctatgggtgctgagtgggacttacttgtccatccattttctctagtccagcaccaggaaacttggatttatccatcttgataagatgtcattgaaattccacttggcaagaacCAC-----------------------------------------A---------------------AATGGAAGAAAGGCCATGAAACCACAGGACAGTA i chlSab2.chr21 I 71 C 0 s manLeu1.NW_012100344v1 56504 229 - 148006 cagaagtgtcatctcagagctactca---caatgaaaggtgatgtctggggctcaggtgtgttgaggtccccatgcctgggctatgggtgctgagtgggacttacttgtccatccattttctctattccagcactgggaaacttgggtttatccatcttgataagatgtcattgaa-------------------at--tccacttggcaagaacCA--------------------CA---------------------AATGGAAGAAAGGCCATGAAATCACAGGACAGTA i manLeu1.NW_012100344v1 I 71 C 0 s cebCap1.NW_016108107v1 302684 229 + 373793 cagaagtgtcatctcagtgctactca---caatgaaaggtgatgtctggggcccaggtgtgttgaggtccccatgcctgggctatgggtgctgagtgggacttacttgtccatccattttctatattccagcactggaaaacttgggattatccatcttgataagatttcatttaa--------------------------------------------------------------atttcacttggcaagaacCACAAATGGAAGAAAGGCCATGAAACCACAGGATCGTA i cebCap1.NW_016108107v1 I 71 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 772584 1908 + 1536524 I e macNem1.NW_012013022v1 8963718 300 - 10413719 I e panPan2.chr7 56734210 300 + 162613886 I a score=4216939.000000 s hg38.chr3_KI270784v1_alt 39567 709 + 184404 CTTGTTCTCAAGGGAATCTTCAGCTTAGGTGGCTCTGTAAAAGAGAAATTACATCATTGAAAAATCGTCGCAggtcaggtgaggtggctcatacct-ataatcccagcccactgggagactaaggcaggaggattccgtgaggccaggagttcaagaccag--------cctgagcaacacagtgaaacctcatctct--acaaaaaattagaaaatgaactgggtgcggtaaaacattcgtatagtcccagctactctggaggctgaaataggaggat---cgcttgagcccaggaagtggaagctgcagtgagctctgatctcaccactgcactctagccttggtgacagagtgagaccctgtctca--------aGacacacacaaacacacac----------------------------------------acacacacacacac---CCA-----------------------------------------ATCTCACTCTGTCCAGCCTT--GACTAATCAAAAGGGCCTTCTGGTTACAGAAGAGGTATGCTCTTTTGTAGGACAGGGAGAGACCAGCAAGCTTGTTCACAGACTTTTCCTCATCCTCTGCTTAGTTTTCCAAGAACCCTCACAGTGGAAATGGAGTCTCTGGGAAAATGACCTAAATCTTTGGGTTACCAGGGGAGAAATATGCCTCCTTTGTCAATTAATAAATGGAACATCTGCCTTAAAATCCAGGGAGTTCTGCTAGAATGAATCACTCCCT-AAGACCCTGACCAATGCATGGAACATGAAAAACTGAAGTTT s panTro5.chr1 222323330 702 + 228573443 CTTGTTCTCAAGGGAATCTTCAGCTTAGGTGGCTCTGTAAAAGAGAAATTACATTGTTGAAAAATCGTCGCAggtcaggtgaggtggctcatacct-ataatcccagcccactgggagactaaggcaggaggattccgtgaggccaggagttcaagaccag--------cctgagcaacacagtgaaacctcatctct--acaaaaaattagaaaatgaactgggtgcggtaaaacattcgtatagtcccagctactctggaggctgaaataggaggat---cgcttgagcccaggaagtggaagctgcagtgagctctgatctcaccactgcactccagcttgggtgacagagtgagaccctgtctca--------aGacacacacaaacacacac----------------------------------------acCCCC-----------CCA-----------------------------------------ATCTCAGTCTGTCCAGCCTT--GACTAATCAAAAGGGCCTTCTGGTTACAGAAGAGGTATGCTCTTTTGTAGGACAGGGAGAGACCAGCAAGCTTGTTCACAGACTTTTCCTCATCCTCTGCTTAGTTTTCCAAGAACCCTCACAGTGGAAATGGAGTCTCTGGGAAAATGACCTAAATCTTTGGGTTACCAGGGGAGAAATATGCCTCCTTTGTCAATTAATAAATGGAACATCTGCCTTAAAATCCAGGGAGTTCTGCTAGAATGAATCACTCCCTTAAGACCCTGACCAATGCATGGAACATGAAAAACTGAAGTTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 56734510 757 + 162613886 CTTGTTCTCAAGGGAATCTTCAGCTTAGGTGGCTCTGTAAAAGAGGAATCACATTGTTGAAAAATCATCGTAGGTCAGCTGAggtggcccatacct-ataatcccagcccattgggagactaaggcaggaggatcccatgaggccaggagttcaagaccag--------cctaggcaacacagtgaaacctcatctct--acaaaaaattagaaaatgagctgggtgcagtggcacattcctatagtcccagctactctgcaggctcaagtgggaggatgaaagtggaagctgcagaagtggaagctgcagtgagctctgatctcaccactgcactccagcctgggtgaca----gagaccctgtctcaacatacacatacatacatacacacacac----------------------------------------acacacacacacac---ccatgcacgcacgcagacacatgcagacacacacacacacCCTCATCTCAATCTGTCCAGCCTT--GACTAAAGAAAAGGATCTGCTGGTTACAGAAGAGGTATGCTCTTTTGTAGGACAGGGAGGGACCAGCAAACTTGTTCACAGTCTTTTCCTCATCCTCTGCTTAGTTTTCCAAGAACCCTCACAGTGGAAACAGAGTCCCTGGGAAAAGGACCTAAATCTTTATATTACCAGGGGAGAAATATGCCTCCTTTGTCAATTAATAAATAGAATACCTGCCTTAAAATCGAGGGAGTTCTGCTAGAATGAATCACTCCCT-ATGACCCCGACCTATGCAGGGAACATGAAAAACTGGAGTTT i panPan2.chr7 I 300 C 0 s gorGor5.CYUI01015383v1 4239638 713 + 4392246 CTTGTTCTCAAGGGAATCTTCAGCTTAGGTGGCTCTGT-AAAGAGAAATTACATTGTTGAAAAATCGTCGCAggtcaggtgaggtggctcatacct-ataatcccagcccactgggagactaaggcaggaggattccgtgaggccaggagttcaagaccag--------cctgagcaacacagtgaaacctcatctct--acaaaaaattagaaaatgaactgggtgcggtaaaacattcgtatagtcccagctactctggaggctgaaataggaggat---cgcttgagcccaggaagtggaagctgcagtgagctctgatctcaccactgcactccagcctgggtgacagagtgagaccctgtctcaaGACA---acacacacacacacacacac----------------------------------------acacacacacacac---cac-----------------------------------------aTCTCAGTCTGTCCAGCCTT--GACTAATCAAAAGGGCCTTCTGGTTACAGAAGAGGTATGCTCTTTTGTAGGACAGGGAGAGACCAGCAAGCTTGTTCACAGACTTTTCCTCATCCTCTGCTTAGTTTTCCAAGAACCCTCACAGTGGAAATGGAGTCTCTGGGAAAATGACCTAAATCTTTGGGTTACCAGGGGAGAAATATGCCTCCTTTGTCAATTAATAAATGGAACATCTGCCTTAAAATCCAGGGAGTTCTGCTAGAATGAATCACTCCCT-AAGACCCTGACCTATGCATGGAACATGAAAAACTGAAGTTT i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46810584 698 - 99891981 CTTGTTCTCAAGGGAATCTTCAGCTTAGGTGACTCTGTAAAAGAGAAATTACATTGTTGAAAAATCATCGCAGGTCATTTGAggtggctcatacct-ataatcccagcccactgggagactaaggcaggaggatcccctgaggccaggagttcaaggccag--------cctgggcaacacagtgaaatctcatctct--acaaaaaattagaaaatgagctgggtgtggtaacacattcctatagtcccagctactctggaggctgaaataggaggat---cgcttgagcccaggaagtggaagctgcagttagctctgatctcaccactgcactccagcctgggtgacagagtgacaccctgtctca--------aCATACACACACCCACACAC----------------------------------------ACCCTC-------------------------------------------------------ATCTCAGTCTGTCCAGCCTT--GACTAATCAAAAGGGTCTTCTGGTTACAGAAGAGGTATGCTCTTTTGTAGGACAGGGAGAGACCAACAAGCTTGTTCACAGCCTTTTCCTCATCCTTTGCTTAGTTTTCCAAGAACCCTCATAGTGGAAACAGAGTCCTTGAGAAAATGACCTAAATCTTTAGGTTACCAGGGGAGAATTATGCCTCCTTTGTCAATTAATAAATGGAACACCTGCCTTAAAATCCAGGGAGTTCTGCTAGAATGAATCACTCCCT-AAGACCCTGACCTATGCAGGGAACATGAAAAACTGTAGTTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55115710 734 + 185818997 CTTGTTCTCAAGGGAATCTTTAGCTTAGGTGGCTCTGTAAAAGAGAAAGTATACTGTTGAAAAATCATTGCAggtcaggtgaggtggctcatacct-ataatgccag-ccactgagagacaaaagcaggaggatcccatgaggccaggagttgaagaccagtgaaatctcttgggcaacacagtgaaaactcatctct--acaaaaaattagaaaatgagctgggtgtggtaacacattcctatactccgagctactctggaggctgaaataggaggat---cgcttgagcccaggaagtagaagctgtagtgagctctgatctcaccacagaactccagcctgggtgacagagtgagaccctgtctcaacacacacacacacacacacacacacacacacacac--------------------------------acacacacacacacacCCTC-----------------------------------------ATCTCAGTCTGCCCAGCCTT--AACTAATCAAAAGGGTCTTCTGGTTACAGAAGAGGTATGCTCTTTTATAGGACAGGGAAAGACCAGCAAGCTTGTTCACAGCCTTTTCCTCATCCTCTGCTTAG-TTTCCAAGAACCCTCACAGTGAAAACAGAGTCCCTGGGAAAACAACCTAAATCTTTAGGTTACCAGGGGAGAAATATGCCTCCTTTGTCAATTAATAAATGGAACACCTGCCTTAAAATCCAGGGAGTTCTGCTAGAATGAATCACTCCCT-AAGACCTTGACCTATGCAGGAAACATGAAAAACTGGAGTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127708062 732 - 192294377 CTTGTTCTCAAGGGAATCTTTAGCTTAAGTGGCTCTGTAAAAGAGAAAGTATATTGTTGAAAAATCATTGCAggtcaggtgaggtggctcatacct-ataatgccag-ccactgagagacaaaagcaggaggatcccatgaggccaggagttgaagaccagtgaaatctcttgggcaacacagtgaaaactcatctct--acaaaaaattagaaaatgagctgggtgtggtaacacattcctatactccacgctactctggaggctgaaataggaggat---cgcttgagcccaggaagtagaagctgcagtgagctctgatctcaccacagaactccagcctgggtgacagagtgagaccctgtctcTacacacacacacacacacacacacacacacacac----------------------------------acacacacacacacacCCTC-----------------------------------------ATCTCAGTCTGCCCAGCCTT--GACTAATCAAAAGGGTCTTCTGGTTACAGAAGAAGTATGCTCTTTTATAGGACAGGGAGAGACCAGCAAGCTTGTTCACAGCCTTTTCCTCATCCTCTGCTTAG-TTTCCAAGAACCCTCACAGTGAAAACAGAGTCCCTGGGAAAACAACCTAAATCTTTAGGTTACCAGGGGAGAAATATGCCTCCTTTGTCAATTAATAAATGGAACACCTGCCTTAAAATCCAGGGAGTTCTGCTAGAATGAATCACTCCCT-AAGACCTTGACCTATGCAGGAAACATGAAAAACTGGAGTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8964018 751 - 10413719 CTTGTTCTCAAGGTAATATTCAGCTTAGCTGGTTCTGTAAAAGAGGAATCACATTGTTGAAAAATCACTGCAggtcagctgaggtggtccatacct-ataatcccagcccatcagaagactaaggcaggaggatcctgtgaggccaggagttcaagaccag--------cctgggcaacacagtgaa-----atctct--acaaaaaattagaaaatgagctgggtgcggtggcactttcctatagtcccagttactctggaggccgaagtgggaggatgaaagtggaagctgcagaagtggaagctgcagtgagctctgatctcaccgttgcactacagcctgggtgacagagtgagaccctgtctcaaCATATacatacatacatacacacacacacacacacacgc--------atgcacacagccacatgcagacacacacacacacacCCTC-----------------------------------------ATCTCAGTCTGTCCAGACTTTAGACTAAAGAAAAGGGTCTTCTGGTTACAGAAGAGGTATGCTCTTTTGTGGGACAGGGAGGGACCAGCAACTTTGTTCACGGTCTTTTCCTCATCCTCTGCTTAGTTTTCCAAGAACCCGCACAGTGGAAACAGAGTGTCTGGGAAAG-GACCAAAATCTTTAGACTACCAGGGGAGAAATACACCTCCTTTGTCAATTAATAAATAGAACACCTGCCTTAAAAGCCAGGGAGTTCTGCTAGAATGAATCACTCCCT-ACGACCCTGACCTATGCAGGGAACATGAAAAACTGGAGTTT i macNem1.NW_012013022v1 I 300 C 0 s cerAty1.NW_012005081v1 52996 709 - 113584 CCTGTTCTCAAGGGAATCTTTAGCTTAGGCGGCTCTGTAAAAGAGAAAGTACATTGTTGAAAAATCATTGCAGATcaggtgaggtggctcatactg-ataatcccag-ccactgggagacaaaggcaggaggaccctgtgaggccaggagttcaagaccag--------cctgggcaacacagtgaaacctgatctcc--acagaaaattagaaaatgaactgggtgtggtaacacattcctacagtcccagctactctggaggctgaaataggaggat---cgcttgagcccaagaagtggaagcttcagtgagctctgatctcaccacagaactccagcctgggtgacagagtgagaccctgtctcaacacacacacacacaaac--------------------------------------------------acacacacacacacacCCTC-----------------------------------------ATCTCAGTCTGCCCAGCCTT--GACTAATCAAAAGGGTCTTCTGGTTACAGAAGAGGTATACTCTTTTGTAGGACAGGGAGAGACTAGCAAACTTGTTTACAACCTTTTCCTCATCCTCTGCTTAGTTTTCCAAGAACTCTCACAGTGGAAATGGAGTCCCTGAGAAAATGACCTAAATCTTTAGGTTACCAGGGGAGAAATATGCCTCCTTTGTCAATTAATAAATGGAACACCTGCCTTAAAATCCAGGGAGTTCTGCTAGAATGAATCACTCCCT-AAGACCTTGACCTATGCAGGAAACATGAAAAACTGGAGTTT i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124167973 718 - 127223203 CTTGTTCTCAAGGGAATCTTTAGCTTAGGTGGCTCTGTAAAAGAGAAAGTACATTGTTGAAAAATCATTGCAggtcaggtgaggtggctcatacct-ataatgccag-ccactgagagacaaaggcaggaggatcccgtgaggccaggagttcaagaccag--------cctggacaacacagtgaaacctcatctct--acaaaaaattagaaaatgagctgggtgtggtaacactttcctatactccaagctactctggaggctgaaataggaggat---cacttgagcccaggaagtagaagctgcagtgagctctgatctcaccacagaactccagcctgggtgacagagtgagaccctgtctcaacacacacacacacacacacacacacac----------------------------------------acacacacacacacacacTC-----------------------------------------ATCTCAGTCTGCCCAGCCTT--GACTAACCAAAAGGGTCTTCTGGTTACAGAAGAGGTATGCTCTTTTATAGGACAGGGAGAGACCAGCAAGCTTGTTCACAGCCTTTTCCTCATCCTCTGCTTAG-TTTCCAAGAACCCTCACAGTGAAAACAGAGTCCCTGGGAAAACAACCTAAATCTTTAGGTTACCAGGGGAGAAATATGCCTCTTTTGTCAATTAATAAATGGAACACCTGCCTTAAAATCCAGGGAGTTCTGCTAGAATGAATCACTCCCT-AAGACCCTGACCTATGCAGGGAACATGAAAAACTGGAGTTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 56733 714 - 148006 CTTGTTCTCAAGGGAATCTTTAGCTTAGGTGGCTCTGTAAAAGAGAAAGTATACTGTTGAAAAATCATTGCAggtcaggtgaggtggctcatacct-ataatgccag-ccactgagagacaaaagcaggaggatcccatgaggacaggagttgaagaccagtgaaatctcttggacaacacagtgaaacctcatctct--acaaaaaattagaaaatgagctgggtgtggtaacacattcctatactccgagctactctggaggctgaaataggaggat---cgcttgagcccaggaagtagaagctgtagtgagctctgatctcaccacagaactccagcctgggtgacagagtgagaccctgtctca------------acacacacacacacac----------------------------------------acacatacacacacacCCTC-----------------------------------------ATCTCAGTCTGCCCAGCCTT--GACTAATCAAAAGGGTCTTCTGGTTACAGAAGAGGTATGCTCTTTTATAGGACAGGGAAAGACCAGCAAGCTTGTTCACAGCCTTTTCCTCATCCTCTGCTTAG-TTTCCAAGAACCCTCACTGTGAAAACAGAGTCCCTGGGAAAACAACCTAAATCTTTAGGTTACCAGGGGAGAAATATGCCTCCTTTGTCAATTAATAAATGGAACACCTGCCTTAAAATCCAGGGAGTTCTGCTAGAATGAATCACTCCCT-AAGACCTTGACCTATGCAGGAAACATGAAAAACTGGAGTTT i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 774492 756 + 1536524 CTTGTTCTCAAAGGCATCTTCAGCTTAGGTGGTTCTGTAAAAGAGGAATCACATTGTTGAAAAATCACCGCAGGTCAGCTGAggtggtccatacct-ataatcccagcccatcaggagactaaggcaggaggatcccgtgaggccaggagttcaagaccag--------cctgggcaatacagtgaa-----atctct--acaaaaaattagaaaatgagctgggtgtggtggcacattcctatagtcccagctactctggaggctgaagtgggaggatgaaagtggaagctgcagaagtggaagctgcagtgagctctgatctcaccactgcactccagcctgggtgacagagtgagaccctgtctcaacatacacatacatacatacatacatacacacacacacacacacacagatgcacacagccacatgc--agacacacacacacCCCCTC-----------------------------------------ATCTCAGTCTGTCTAGACTT--GACTAAAGAAAAGGGTCTTCTGGTTACAGAAGAGGTATGCTCTTTTGTGGGACAGGGAGGGACCAGCAACCTTGTTCATGGTCTTTTCCTCATCCTCTGCTTAGTTTTCCAAGAACCCTCACAGTGAAAACAGAGTCCCTGGAAAAAGGACCAAAATCTTTAGACTACCAGGGGAGAAATACGCCTCCTTTGTCAATTAATAAATAGAACACCTGCCTTAAAATCCAGGGAGTTCTGCTAGAATGAATCACTCCCT-ACGACCCTGACCTATGCAGGGAACATGAAAAACTGGAGTTT i colAng1.NW_012116633v1 I 1908 C 0 s cebCap1.NW_016108107v1 302913 708 + 373793 CTTGTTCTCAAGACAATCTTCAGCTTGGGTGCTTCTATAAAAGAGGAATTACATTGTTGAAAACTCATCACAggtcaggtgaggtgcatgatacctaataatcccagcccactgggagactaaggcaggaggatccggt--------gagttcaagaccag--------ccttggcaacacagtgaaacctcatctctagaaaaaaaattagaaaatcagctgggtatggtggcacattcctatagtcccagctactctggaggcttaagtgggaggat---tgcttgggctcaggaagtggaagctgctctgagctctgatctcatcactgcactccagcctgggtgaca---tgaaactgtgtctcaacacacacacacacacacacacacacacac--------------------------------------acacacacacacacacacTC-----------------------------------------TTCTCAGTCTGTTCAGCCTT--GACTAATGAAAAAGGTCTTCTGGTTATAAAAGAGGTGAGCTTTTTTGTAGGACAGGGAAGGAGTAGCAAGCTTATTCACAGCC-GTTCCTCATCCTCTGCTCAGTTTTCCAACAACCTTCACAGTGGAAAGGGAGTCCCTGGGGAAAGGACCTAAATCTTCAGGTTCCCAGAGGAGAAATATGTCTCCTTTGTCAAGT-----ATGGAACACCTGCCATTAGAATCAGGGAGTTCTGCTAGCATGAATCACTCCCT-ATGACCCTGACCTATGCAGGGAACATGAGAAACTGGAGTTT i cebCap1.NW_016108107v1 C 0 N 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I a score=352202.000000 s hg38.chr3_KI270784v1_alt 40276 75 + 184404 AActgggcgcggtggatcacgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctgaggtcaaa s panTro5.chr1 222324032 75 + 228573443 AActgggcacggtggatcacgcctgtaatcccagcactttgggaggctgaggcgggcagatcacctgaggtcaaa i panTro5.chr1 C 0 C 0 s panPan2.chr7 56735267 74 + 162613886 ggccaggcgcagtggctcacacctgtaatcccagcactttgggaggccgaggc-ggtggaccatctgaggtcagg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4240351 75 + 4392246 AActgggcgcggtggatcacgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctgaggtcaaa i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46811282 75 - 99891981 AActgggcacggtggatcatgcctgtaatcccagcactttgggaggccgacgcaggtggatcacctgaggtcaaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55116444 71 + 185818997 AAccaggcgcggtggctcacgcctgtaatcccagtactttgggaggccgaggcggatggatcatctgaggt---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127708794 71 - 192294377 AAccaggcgcggtggctcacgcctgtaatcccagtactttgggaggccgaggcggatggatcatctgaggt---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8964769 74 - 10413719 ggctgggcacagtggctcacacctgtaattctagcactttgggaggccaaggcgg-cggaccacctgaggtcagg i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 53705 75 - 113584 AAccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaaggtgggcggattacctgaggtcaaa i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124168691 75 - 127223203 AAccagacgcggtggctcacgcctgtaatcccagtacttcggaaggccgaggcagatggatcatctgaggtcaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 57447 75 - 148006 AAccaggtgcagtggctcatgcctgtaatcccagtactttgggaggccaaggcggatggatcatctgaggtcaaa i manLeu1.NW_012100344v1 C 0 I 6611 s colAng1.NW_012116633v1 775248 74 + 1536524 ggctgggcacagtggctcacacctgtaatcccagcactttgggaggctgaggcag-cgaaccacctgagatcagg i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I a score=16480.000000 s hg38.chr3_KI270784v1_alt 40351 13 + 184404 agttctagatcag s panTro5.chr1 222324107 13 + 228573443 agttctagatcag i panTro5.chr1 C 0 C 0 s panPan2.chr7 56735341 13 + 162613886 agttcgagaccag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015383v1 4240426 13 + 4392246 agttctagatcag i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55116515 4 + 185818997 ---------caaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127708865 4 - 192294377 ---------caaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8964843 13 - 10413719 agttcgagacaag i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 53780 13 - 113584 agttctagatcag i cerAty1.NW_012005081v1 C 0 C 0 s colAng1.NW_012116633v1 775322 13 + 1536524 agttcaagacaag i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e manLeu1.NW_012100344v1 57522 6611 - 148006 I e chlSab2.chr21 124168766 0 - 127223203 C e nomLeu3.chr17 46811357 0 - 99891981 C a score=32406.000000 s hg38.chr3_KI270784v1_alt 40364 5 + 184404 cctgg s panTro5.chr1 222324120 5 + 228573443 cctgg i panTro5.chr1 C 0 C 0 s panPan2.chr7 56735354 5 + 162613886 cctgg i panPan2.chr7 C 0 I 33229 s gorGor5.CYUI01015383v1 4240439 5 + 4392246 cctgg i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46811357 5 - 99891981 cctgg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55116519 5 + 185818997 cctgg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127708869 5 - 192294377 cctgg i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8964856 5 - 10413719 cctgg i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 53793 5 - 113584 cctgg i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124168766 5 - 127223203 cctgg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 64133 5 - 148006 cctgg i manLeu1.NW_012100344v1 I 6611 C 0 s colAng1.NW_012116633v1 775335 5 + 1536524 cctgg i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I a score=603478.000000 s hg38.chr3_KI270784v1_alt 40369 133 + 184404 ccaacatggtgaaaccccgtctctactaaaaatacaaaaattagttgggcatggtggtggacacctgtaatcccagctacttgggaggctgaggcaggaaaatcgcttgaacccggaaggcggaggttgcagt s panTro5.chr1 222324125 133 + 228573443 ccaacatggtgaaaccccgtctctactaaaaatacaaaaattagttgggcatggtggtggacacctgtaatcccagctactcgggaggctgaggcaggaaaatcgcttgaacccagaaggtggaggttgcagt i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4240444 132 + 4392246 ccaacatggtgaaaccccgtctctactaaaaatacaaaaattagttgggcatggtggtggac-cctgtaatcccagctactcgggaggctgaggcaggaaaatcgcttgaacccggaaggcggaggttgcagt i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46811362 133 - 99891981 ccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtagtggtggacgcctgtaatcccagctactcgggaggctgaggcagggaaattgcttgaatctggaaggcggaggttgcagt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55116524 133 + 185818997 ccaacatggtgaaaccccgcctctactaaaactacaaaaattagctgggcgtggtggtggacgcctgtaatcccagctactccagaggctgaggcaggaaaatcacttgaacccagaaggcggaggttgcaat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127708874 133 - 192294377 ccaacatggtgaaaccccgcctctactaaaactacaaaaattagctgggcgtggtggtggacgcctgtaatcccagctactccagaggctgaggcaggaaaatcacttgaacccagaaggcggaggttgcaat i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 8964861 133 - 10413719 ccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccgggtgtggtagtggatgtgtgtaatcccagctacttaggaggcagaggcaggaaaatcacttgaacccaggaggcagaggttgcagt i macNem1.NW_012013022v1 C 0 I 57134 s cerAty1.NW_012005081v1 53798 133 - 113584 ccaacatggtgaaaccccatctctaccagaaatacaaaacttagctgggcgtggtggtggacgcctataatcccagctactcaggaggctgaggcaggaaaatcgcttgaacctggaaggcggaggtggcagt i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124168771 133 - 127223203 ccaacatggtgaaaccccgcctctactaaaactacaaaaattagctgggcgtggtggtggacgcctgtaatcccagctactccagaggctcaggcaggaaaatcgcttgaacccagaaggcggaggttgcaat i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 64138 133 - 148006 ccaacatggtgaaaccccgcctctactaaaactacaaaaattagctgggcgtgatggtggacgcctgtaatcccagctactccagaggctgaggcaggaaaatcacttgaacccagaaggcggaggttgcaat i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 775340 133 + 1536524 ccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggtgtggtagtggatgtgtgtaattccagctactcaggaggcagaggcaggaaaatcacttgaacccaggaggcagaggttgcagt i colAng1.NW_012116633v1 C 0 I 37458 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e panPan2.chr7 56735359 33229 + 162613886 I a score=3861781.000000 s hg38.chr3_KI270784v1_alt 40502 1319 + 184404 TACTTCTAGAAG---AATTTCCATTAGCCCTTTGAAATCCTTCAACATTCATGAAGGCCAAAGAGTTTTCACCTAATTTAATCTGATGGGTATGTGACCAGAGTCTTTCTAGGGAATAGAGACTCCCAAACAGTTCGACTGGGAAGTGAGGAGAGAATTTATTACTC-AAAACCAAAGGGAAATGAAAAGAGGCCAACATAGAATGTCATTATTCTTTCTTGGCGGGGAATGGATTCCAGAGTCATTCTGTGACCTTTAC-----ATGACCTCCTTATTAGCATCTAAAAGCTTCCAGTGTAGGATGCAGCCAGCTAGGTTCTCTTCTAATGTAATAAAATTTGCTTCGGCAAATCTTATGCAGAGCCATCTCCAGGCTCCAGAAACAATAGGCTATAAATTACTGGATCTCCCATTTGATACAATGAAGTATGAGCATGGTCCTGAATGACTCCTCTACATACTACTCTGGGTGGCTTGAAGTGAATTTGATACAAGAACTGGAGCGAGGGCAAAGCAGAGCTAGATCTAGGATTAATGTGCTTGGGCCCAGCTCCTCACTACTCACCTATGAGTCTAGTTCCAGAACCCAAGTAGAGGATGGGGAAACAAGGCTCCTGACTTTTTTTCCCTAATGTCTG-CATCTCTTTCACA-TTTCTTATCTCCTTGCAAAGAAACTAAACAGGCTCAACTGAAATAACTAAATGATTAAACCCTATACAGAGACTCTCCAAAGACTGACAAAATATCATTCAAGACTGTTACACAGACAACCTTGAGGATGACTTGATGTACCAGTGATCTACAATATTTGGGATCATTCCAAATTCCCATCAAGGATCTGCCTATATCAACAAAGGAGCCAAGGACCAACCATTCAAATGGGCCATGCTGCCAAGCC-tttttttttttttttttAACAATGCCATCTCTTCATATTGTTCCATTTAACAAAACTGCAGCCCTTCATCTATCCTTAAGTCCCTTGGCCAATGGTACAGGGCCAGAGTATGCTACTCCCTAGCAGGAAATCAACAGGATGACCTACTAAACACCATTCAGAAGATGCTAAGACCCATGAATTGCAACAGGAAAGAAAAGACAGAGAATTAGTCAGACAGGTACATGCTGTGCCAAAAATGCACTACAGCCCCCACCCAATTCTGCCTAATCCT--AGCTGGGCTGACACCAACCTGATGAGACAGGCCTATAAGATCTCAAACTAAAACAGAAACTCCTGAACTGGGTTCTTTCGAGCCCAGGAAGCAGCAGTAAATCATTAAAGAACAGATAAGTTCTTAAGGTGA-GGGAGAGTTTCAGATAAATGG s panTro5.chr1 222324258 1320 + 228573443 TACTTCTAGAAG---AATTTCCATTAGCCCTTTGAAATCCTTCAACATTCACGAAGGCCAAAGAGTTTTCACCTAATTTAATCTGATGGGTATGTGACCAGAGTCTTTCTAGGGAATAGAGACTCCCAAACAGTTCAGCTGGGAAGTGAGGAGAGAATTTATTACTC-AAAATCAAAGGGAAATGAAAAGAGGCCAACATAGAATATCATTATTCTTTCTTGGCAGGGAATGGATTCCAGAGTCATTCTGTGACCTTTAC-----ATGACCTCCTTATTAGCATCTAAAAGCTTCCAGTGTAGGATGCAGCCAGCTAGGTTCTCTTCTAATGTAATAAAATTTGCTTCGGCAAATCTTATGCAGAGCCATCTCCAGGCTCCAGAAACAATAGGCTATAAATTACTGGATCTCCCATTTGATACAATGAAGTATGAGCACGGTCCTGAATGACTCCTCTACATACTACTCTGGGTGGCTTGAAGTGAATTTGATACAAGAACTGGAGCGAGCGCAAAGCAGAGCTAGATCTAGGATTAATGTGCTTGGGCCCAGCTCCTCACTACTCACCTATGAGTCTAGTTCCAGAACCCAAGTAGAGGATGGGGGAACAAGGCTCCTGACTTTTTTTCCCTAATGTCTG-CATCTCTTTCACA-TTTCTTATCTCCTTGCAAAGAAACTAAACAGGCTCAACTGAAATAACTAAATGATTAAACCCTATACAGAGAATCTCCAAAGACTGACAAAATATCATTCAAGACTGTTACACAGACAACCTTGAGGATGACTTGATGTACCAGTGATCTACAATATTTGGGATCATTCCAAATTCCCATCAAGGATCTCCCTATATCAACAAAGGAGCCAAGGACCAACCATTCAAATGGGCCCTGCTGCCAAGCCtttttttttttttttttttACAATGCCATCTCTTCATATTGTTCCATTTAACAAAACTGCAGCCCTTCATCTATCCTTAAGTCCCTTGGCCAATGGTACAGAGCCAGAGTATGCTACTCCCTAGCAGGAAATCAACAGGATGACCTACTAAACACCATTCAGAAGATGCTAAGACCCATGAATTGCAACAGGAAAGAAAAGACAGAGAATTAGTCAGACAGGTACATGCTGTGCCAAAAATGCACTACAGCCCCCACCCAATTCTGCCTAATCCT--AGCTGGGCTGACACCAACCTGATGAGACAGGCCTATAAGATCTCAAACAAAAACAGAAACTCCTGAACTGGGTTCTTTCGAGCCCAGGAAGCAGCAGTAAATCATTAAAGAACAGATAAGTTCTTAAGGTGA-GGGAGAGTTTCAGATAAATGG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4240576 1317 + 4392246 TACTTCTAGAAG---AATTTCCATTAGCCCTTTGAAATCCTTCAACATTCATGAAGGCCAAAGAGTTTTCACCTAATTTAATCTGATGGGTATGTGACCAGAGTCTTTCTAGGGAATAGAGACTCCCAAACAGTTCAGCTGGGAAGTGAGGAGAGAATTTATTACTC-AAAATCAAAGGGAAATGAAAAGAGGCCAACATAGAATGTCATTATTCTTTCTTGGCGGGGAATGGATTCCAGAGTCATTCTGTGACCTTTAC-----ATGACCTCCTTATTAGCATCTAAAAGCTTCCAGTGTAGGATGCAGCCAGCTAGGTTCTCTTCTAATGTAATAAAATTTGCTTCAGCAAATCTTATGCAGAGCCATCTCCAGGCTCCAGAAAC-ATAGGCTATAAATTACTGGATCTCCCATTTGATACAATGAAGTATAAGCACGGTCCTGAATGACTCCTCTACATACTACTCTGGGTGGCTTGAAGTGAATTTGATACAAGAACTGGAGCGAGCGCAAAGCAGAGCTAGATCTAGGATTAATGTGCTTGGGCCCAGCTCCTCACTACTCACCTATGAGTCTAGTTCCAGAACCCAAGTAGAGGGTGGGGAAACAAGGCTCCTGAC-TTTTTTCCCTAAT-TCTG-CATCTCTTTCACA-TTTCTTATCTCCTTGCAAAGAAACTAAACAGGCTCAACTGAAATAACTAAATGATTAAACCCTATACAGAGAATCTCCAAAGACTGACAAAATATCATTCAAGACTGTTACACAGACAACCTTGAGGATGACTTGATGTACCAGTGATCTACAATATTTGGGATCATTCCAAATTCCCATCAAGGATCTGCCTATATCAACAAAGGAGCCAAGGACCAACCATTCAAATGGGCCCTGCTGCCAAGCCtttttttttttttttttttACAATGCCATCTCTTCATATTGTTCCATTTAACAAAACTGCAGCCCTTCACCTATCCTTAAGTCCCTTGGCCAATGGTACAGAGCCAGAGTATGCTACTCCCTAGCAGGAAATCAACAGGATGACCTACTAAACACCATTCAGAAGATGCTAAGACCCATGAATTGCAACAGGAAAGAAAAGACAGAGAATTAGTCAGACAGGTACATGCTGTGCCAAAAATGCACTACAGCCCCCACCCAATTCTGCCTAATCCT--AGCTGGGCTGACACCAACCTGATGAGACAGGCCTATAAGATCTCAAACTAAAACAGAAACTCCTGAACTGGGTTCTTTCGAACCCAGGAAGCAGCAGTAAATCATTAAAGAACAGATAAGTTCTTAAGGTGA-GGGAGAGTTTCAGATAAATGG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46811495 1210 - 99891981 TACTTCTAGAAA---AACTTCCAACAGCCGTTTGAAATCCTTCAACATTCATTAAGGCCAAAGAGTTTTCACCTAATTTAATCTGATGGGTATGTGACCAGAGTCTTTCTAGGGAATAGAGACTCCCAAACTGTTCAGCTGGGAAGTCAGGAGAGAATTTATTACTG-AAAATCAAAGGGAAATGAAAAGAGGCCAATCTAGAATGTCATTATTCTTTTTTCGGGGGGAATGGATTCCAGAGTCATTTTGTGACCTTTAC-----ATGACCTC---ATTAGCATCTAAAAGCTTCCAATGTAGGATGCAGCCAGCTAGGTTCTCTTCTAATGTAATAAAATCTGCTTCGGCAAAGCTTATGCAGAGCCATCTCCAGACTCCAGAAATAATAGGCTATAAATTACTGGATCTCCCATTTGATATAATGAAGTATAAGCACGGTCCTGAATGACTCCTCTACATACTACTCTGGGTGGCTTGAAGTGAATTTGACACAAGAACTGGAGCGAGTGCAAAGCAGAGCTAGATCTAGGATTAATGCGCTTGGGCCCACCTCCTCACTACTCACC--TGAGTCCAGTTCCAGAATCCAAGTAGAGGGTGGGGAAACAAGGCTCCTGGC---GTTTCCCTAATGTCTG-CATCTCTTTCACATTTTCTTACCTCCTTGCAAAGAAACTAAACAGGCTCGACTGAAATAACTAAATGATTAAACCCTATGCAGAGAATCTCC-AAGATTCACAAAATATCATTCAAGACTGTTACACAGACAACCTTGAGGATGACTTGATGTACCAGTGATCTACAATATTTGGGATCATTCCAAATTCTCATCAAGGATCTGCCTATATCAACACGGGAGCCAAGGACCAACCATTCGAATGGGCCCTGCTGCCAAGCC--------TTTTTTTTTTTACAATGCCATCTCTTCATATTGTTCCGTTTAACAAAACTGCAGCCTGTCACCCATCCTTAAGTCCCTTGGCCAATGGTACAGAGCCAGAGTATGCTACTCCCTAGCAGGAAATCAACAGGATGACCTACTAAACACCATTCAGAAGATACTAAGACCCATGAATTGCAACAGG-----AAAGACAGAGAATTAGTCAGACAGGTACATGCTGTGCCCAAAATGCACTACAACCCCCACTTATTTCTGCCTAATCCT--AGCTGGGCTGACACCAGCCTGAT-----------------------------------------------------------------------------------------CAGATAAGTTCTTGAGGTGA-AGGAGAGTTTCAGATAAATGG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55116657 1299 + 185818997 TACTTCT---AG---AATTTCCATTAGCCCTTTGAAATCCTTCAACATTCATTAAGGTCAAAGAGTTGTCACCTAATTTAATCTGATGGGCATGTGATCAGAGTCTTTCTAGGGAATAGAGACTCCCAAACTGTTCAGCTGGGAAGTGAGGAGATAATTTATTACTC-AAAATCAAAGGGAAACGAAAAGAGGCCAACCTAGAGCGTCATTATTCTTTCTTGGCAGGGAATGGATTCCAGAGTCATTTTGTGACCTTTACCTTCTGTGACCTCCTTATTAGCATCTAAAAGCTTCCAGCATAGGATGCAGCCAGCTAGGTTCTCTTCTAATGTAATAAAATCTGCTTCAGCAAAGCTTATGCAGAGCCATCTCCAGACTCCAGAAATAACAGGCTATAAATTACTGGATCTCCCATTTGATATAATAAAGTATAAGCACGCTCCTGAATGACTCCTCTACATACTACTCTGGGTGACTTGAAGTGAATTTGATTCAAGTACTGGAGCGAGTGCAAAGCAGAGCTAGATCTAGGATTAATGTGCTTGGGCCCAGCTCCTCACTACTCACCTATGAGTACAGTTCCAGAACCTAAGTAGAGGGTGGGGAAACAAGGCTCCTGGC-TTTTTTCCCTAATGCCTGCCATCTCTTTCAGA-TTTCTTATTTATTTGCAAAGAAACTAAACAGGCTCGACTAAAAAAACTAAATGATTAAACCCTACACAGAGAATCTCCAAAGATTCACAAAATATCATTCAAGACTGTTAGAAAGACAGCCTTGAGGATAACTTGATGTACCAGTGATCTACAATATTTGGGATCATTCCAAATTCCCGTCAAGGATCTGCCTGTATCAACACAGGGACAAAGGACCAACCATTCAAATGGGCCCTGCTGCCAA------------------------AATGCCATCTCTTCATATTGTTCCATTTAACAAAACTGCAGCCTGTCATCTATCCTTAAGTCCCTTGGCCAATGGTACAGTGCCAGAGTATGCTACTCCCTAGTAGGAAATCAACAGGATGACCTACTAAACACCATTCAAAAGATGCTAAGGCCCATGAATTGCAACAGGAAAGAAAAGACACATAATTAGTCAGACAGGTACATGCTGGGCCAAAAATGCACTACAACCCCCACCCAATTCTGCCTAATCCT--AGCTGGGCTGACACCAACCTGATGAGTCAGGCCTACAAGATCTCAAACTAAAACAGAAACTCCTGAACTGGGTTCTTGCAAACCCAGGAAGCAGCAGTAAACCATTAAAGAACAGATAAGGTCTGGAGGTGAGGGGGGAGTTTCAGATAAATGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127709007 1299 - 192294377 TACTTCT---AG---AATTTCCATTAGCCCTTTGAAATCCTTCAACATTCATTAAGGTCAAAGAGTTGTCACCTAATTTAATCTGATGGGCATGTGATCAGAGTCTTTCTAGGGAATAGAGACTCCCAAACTGTTCAGCTGGGAAGTGAGGAGATAATTTATTACTC-AAAATCAAAGGGAAACGAAAAGAGGCCAACCTAGAGCGTCATTATTCTTTCTTGGCAGGGAATGGATTCCAGAGTCATTTTGTGACCTTTACCTTCTGTGACCTCCTTATTAGCATCTAAAAGCTTCCAGCATAGGATGCAGCCAGCTAGGTTCTCTTCTAATGTAATAAAATCTGCTTCAGCAAAGCTTATGCAGAGCCATCTCCAGACTCCAGAAATAACAGGCTATAAATTACTGGATCTCCCATTTGATATAATAAAGTATAAGCACGCTCCTGAATGACTCCTCTACATACTACTCTGGGTGACTTGAAGTGAATTTGATTCAAGTACTGGAGCGAGTGCAAAGCAGAGCTAGATCTAGGATCAATGTGCTTGGGCCCAGCTCCTCACTACTCACCTATGAGTACAGTTCCAGAACCTAAGTAGAGGGTGGGGAAACAAGGCTCCTGGC-TTTTTTCCCTAATGCCTGCCATCTCTTTCAGA-TTTCTTATTTATTTGCAAAGAAACTAAACAGGCTCGACTAAAAAAACTAAATGATTAAACCCTACACAGAGAATCTCCAAAGATTCACAAAATATCATTCAAGACTGTTAGAAAGACAGCCTTGAGGATAACTTGATGTACCAGTGATCTACAATATTTGGGATCATTCCAAATTCCCGTCAAGGATCTGCCTATATCAACACAGGGACAAAGGACCAACCATTCAAATGGGCCCTGCTGCCAA------------------------AATGCCATCTCTTCATATTGTTCCATTTAACAAAACTGCAGCCTGTCATCTATCCTTAAGTCCCTTGGCCAATGGTACAGTGCCAGAGTATGCTACTCCCTAGTAGGAAATCAACAGGATGACCTACTAAACACCATTCAGAAGATGCTAAGGCCCATGAATTGCAACAGGAAAGAAAAGACACATAATTAGTCAGACAGGTACATGCTGGGCCAAAAATGCACTACAACCCCCACCCAATTCTGCCTAATCCT--AGCTGGGCTGACACCAACCTGATGAGTCAGGCCTACAAGATCTCAAACTAAAACAGAAACTCCTGAACTGGGTTCTTGCAAACCCAGGAAGCAGCAGTAAACCATTAAAGAACAGATAAGGTCTGGAGGTGAGGGGGGAGTTTCAGATAAATGA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 53931 1303 - 113584 TACTTCT---AGAATAATTTCCATTAGCCCTTTGAAATTCTTTAACATTCATTAAGGCCAAAGAGTTTTCACCTAATTTAATCTGATGGGTATGTGACCAGAGTCTTTCTAGGGAATAGAGACTCCCAAACTGTTCAGCTGGGAAGTGAGGAGATAATTTATTACTC-AAAATCAAAGGGAAATGAAAAGAGGCCAACCTAGAATGTCATTATGCTTTCTTGGCAGGGAATGGATTCCAGAGTCATTCTGTGACCTTTAC-----ATGACCTCCTTATTAGCATCTAAAAGCTTCCAGTGTAGGATGCAGCCAGCTAGGTTCTCTTCTAATGTAATAAAATCTGCTTCAGCAAAGCTTATGCAGAGCCATCTCCAGACTCCAGAAATCACAGGCTATAAATTACTGGATCTCCCATTTGATATAATGAAGTATAAGCATGGTCCTGAATGACTCCTCTACATACTACTCTGGGTGGCTTGCAGTGAATTTGATACAAGAACTGGAGAAAATGCAAAGCAGAGCTAGATCTAGGATTAATGTGCTTGGGCCCAGCTCCTCACTACTCACCTATGAGTACAGTTCCAGAACCCAAGTAGAGGGTGGGGAAACAAGGCCCCTGGC-TTTTTTCCCTAATGTCT-CCATCTCTTTCACA-TTTCTTATCTCCTTGCAAAGAAACTAAACAGGCTCGACTAAAATAATTAAATGATTAAACCCTATACAGAGAATCTCCAAAGAGTCACAAAATATCATTCAAGACTGTCACACAGACAACCTTGAGGATGACTTGATGTACCAGTGATCTA---------ATATCATTCCAAATTCCCATCAAGGATCTGCCTATACCAACACAGGAGCCAAAGATCAACCATTCAAATGGGCCCTGCTGTCAAGCC---------TTTTTTATTTACAATGCCATCTCTTCATATTGTTCCGTTTAACAAAAATGCAGCCTGTCATCTACCCTTAAGTCCATTGGCCAATGGCACAGAGCCAGAGTATGCTATTCCCTAGCAGGAAATCAACAGGATGACCTACTAAATACCATTCAGAAGATGTTAAGACCCATGAATTGCAGCAGGAAAGAAAAGACAGATAACTAGTCAGCCAGGTACATGCTGTGCCAAAAATGCACTACAGCCCCCACCCAATTCTGCCTAACCCTAGAGCTGGGCTGACACCAACCTGATGAGACAGGCTTATAAGATCTCAAACTAAAACAGAAACTCCTGAACTGGGTTCTTGCAAACCCAGGAAGCAGCAGTAAACCATTAAAGAACAGATAAGTTCTTGAGGTGA-GGGAGAGTTTCAGAAAAATGG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124168904 1303 - 127223203 TACTTCTAGAAG---AATTTCCATTAGCCCTTTGAAATCCTTCAACATTCATTAAGGTCAAAGAGTTATCACCTAATTTAATCTGATGGGTATGTGACCAGGGTCTTTCTAGGGAATAGAGACTCCCAAACTGTTCAGCTGGGAAGTGAGGAGATAATTTATTACTCAAAAATCAAAGGGAAACGAAAAGAGGCCAACCTAAAGCGTCATTATTCTTTCTTGGCAGGGAATGGATTCCAGAGTCATTCTGTGACCTTTACCTTCTGTGACCTCCTTATTAGCATCTAAAAGCTTCCAGCATAGGATGCAGCCAGCTAGGTTCTCTTCTAATGTAATAAAATCTGCTTCAGCAAAGCTTATACAGAGCCTTCTCCAGACTCCAGAAATAATAGGCTATAAATTACAGGATCTCCCATTTGATATAATAAAGTATAAGCACGCTCCTGAATGACTCCTCTACATACTACTCTGGGTGACTTGAAGTGAATTTGATTCAAGTACTGGAGCAAGTGCAAAGCAGAGCTAGATCTAGGATTAATGTGCTTGGGCCCAGCTCCTCACTACTCACCTATGAGTACAGTTCCAGAACCTAAGTAGAGGGTGAGGAAACAAGGCTCCTGGC-TTTTTTCCCTAATGCCTGCCATCTCTTTCAGA-TTTCTTATTTCTTTGCAAAGAAACTAAACAGGCTCGACTAAAAAAACTAAATGATTAAACCCTACACAGAGAATCTCCAAAGATTCACAAAATATCATTCAAGACTGTTAGAAAGACAGCCTTGAGGATAACTTGATGTACCAGTGATCTACAATATTTGGGATCATTCCAAATTCCCGTCAAGGATCTGCCTATATCAACACAGGGACAAAGGACCAACCATTCAAATAGGCCCTGCTGCCAA------------------------AATGCCATCTCTTCATATTGTTCCATTTAACAAAACTGCAGCCTGTCATCTATCCTTAAGTCCCTTGGCCAATGGTACAGAGCCAGAGTATGCTACTCCCTAGCAGGAAATCAACAGAATGACCTACTAAACACCATTCAGAAGATGCTAAGGCCCATGAATTGCAACAGGAAAGAAAAGACAGATAATTAGTCAGACAGGTACATGCTGGGCCAAAAATGCACTACAATCCCCACCCAATTCTGCCTAATCCT--AGCTGGGCTGACACCAACCTGATGAGTCAGGCCTATAAGATCTCAAACTAAAACAGAAACTCCTGAACTGGGTTCTTGCAAACCCAGGAAGCAGCAGTAAACCATTAAAGAACAGATAAGGTCTGGAGGTGAGGGGGGAGTTTCAGATAAATGA i chlSab2.chr21 C 0 I 1517 s manLeu1.NW_012100344v1 64271 1299 - 148006 TACTTCT---AG---AATTTCCATCAGCCCTTTGAAATCCTTCAACATTCATTAAGGTCAAAGAGTTGTCATCTAATTTAATCTGATGGGTATGTGACCAGAGTCTTTCTAGGGAATAGAGACTCCCAAACTGTTCAGCTGGGAAGTGAGGAGATAATTTATTACTC-AAAATCAAAGGGAAATGAAAAGAGGCCAACCTAGAGCGTCATTATTCTTTCTTGGCAGGGAATGGATTCCAGAGTCATTCTGTGACCTTTACCTTCTGTGACCTCCTTATTAGCATCTAAAAGCTTCCAGTGTAGGATGCAGCCAGCTAGGTTCTCTTCTAATGTAATAAAATCTGCTTCAGCAAAGCTTATGCAGAGCCATCTCCAGACTCCAGAAATCACAGGCTATAAATTACTGGATCTCCCATTTGATATAATAAAGTATAAGCACGCTCCTGAATGACTCCTCTACATACTACTCTGGGTGACTTGAAGTGAATTTGATTCAAGTACTGGAGCGAGTGCAAAGCAGAGCTAGATCTAGGATTAATGTGCTTGGGCCCAGCTCCTCACTACTCACCTATGAGTACAGTTCCAGAACCTAAGTAGAGGGTGGGGAAACAAGGCCCCTGGC-TTTTTTCCCTAATGCCTGCCATCTCTTTCAGA-TTTCTTATTTCCTTGCAAAGAAACTAAACAGGCTCGACTAAAAAAACTAAATGATTAAACCCTACACAGAGAATCTCCAAAGATTCACAAAATATCATTCAAGACTGTTAGAAAGACAGCCTTGAGGATAACTTGATGTACCAGTGATCTACAATATTTGGGATCATTCCAAATTCCTGTCAAGGATCTGCCTATATCAACACAGGGACAAAGGACCAATCATTCAAATGGGCCCTGCTGCCAA------------------------AATGCCATCTCTTCATATTGTTCCATTTAACAAAACTGCAGCCTGTCATCTATCCTTAAGTCCCTTGGCCAATGGTACAGTGCCAGAGTATGCTACTCCCTAGTAGGAAATCAACAGGATGACCTACTAAACACCATTCAGAAGATGCTAAGGCCCATGAATTGCAACAGGAAAGAAAAGACAGATAATTAGTCAGACAGGTACATGCTGGGCCAAAAATGCACTACAACCCCCACCCAATTCTGCCTAATCCT--AGCTGGGCTGACACCAATCTGATGAGTCAGGCCTGTAAGATCTCAAACTAAAACAGAAACTCCTGAACTGGGTTCTTGCGAACCCAGGAAGCAGCAGTAAACCATTAAAGAACAGATAAGGTCTGGAGGTGAGGGGGGAGTTTCAGATAAATGA i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=3415666.000000 s hg38.chr3_KI270784v1_alt 41821 1108 + 184404 AATGCTGGTAGAACACAGGGCCCAAAGGAGCAAAAGTTAACCTAAGCCCAGGTAGAACCTTGTTTACTAGAGTATTAGGCATGGGTTTGGGCAACTATTCTAACCAGAGAAACTGGCTTCAGTGAGGGCAAGTTGGCAATCCAAGGTATAGCATGCATAGGGCTGGCAAAATTCAGGGTGACTGAAGCAAAAGCTTCATAACCAGAAAGACCACATCTGGGGGTAGAGCACAAAACTCTCAAGAGATGAATCTTTGTAAGAGTGAGGCAGAACTATATAGCAGTTTTAGGAGATCTGTTGGTGCCCAGCAAGAGCTCCAAACGGGCTATATGCAGGGATGCAGGCTGTAGTCTCAGGAGAGGAGGTTCACAAAAGTCATTCAGTCCAAGACCTCAAACTGTGttctctactaaaaggaatcaaggttccctagagaaatggctgactccatgtatggtgcagtatattgatcctggaacatctgttttgccagaaagcaaggaagccatcaaagtccaacaggatcacgtcaaaaagacatgaaagtcaacttgaagagataattattaacctagatgagacaatgtaagcatccaaaacaataaagactgcaatggcctgaaatacatcaaatgcaaacaataatctatgagttcataatggtattcagaaaaaaaaa---ctactggtcattagagggaaggttactaggtcactaacttactactctgaaaagtgacttaagatgagaggtagggtggagaattagctatttattcagtctttcctgtacaaacataaatttttagggAGATTGAAGCagatgaaacaaatct--ggaaaaatggaggtaactgcttaatctgcgggttgggtgcatggaggttcaacatatttcttttgtgtatatttgaaCCCCCTAC--AAAAAAAGCACAAGACAGAATGTGAGCCAAGCAGCTTAGGGTTTAGGCAAGGCTTCTGCCTACAAGAGACACTAGGATATGAGGGGTAGTTTTAGCCCTAATGGGCTGAGCCAACTGGAGGTATATAGGGAAGTGCTAAATTGCAGAGGTATCATGTTGCCCAGCACTTGATCAAATCCTAGATCCTAGG s panTro5.chr1 222325578 1108 + 228573443 AATGCTGGTAGAACACAGGGCCCAAAGGAGCAAAAGTTAACCTAAGCCCAGGTAGAACCCTGTTTACTAGAGTATTAGGCATGGGTTGGGGCAACTATTCTAACCAGAGAAACTGGCTTCAGTGAGGGCAAGTTGGCAATCCAAGGTATAGCATGCATAGGGCTGGCAAAATTCAGGGTGACTGAAGCAAAAGCTTCAGAACCAGAAAGACCACATCTGGGGGTAGAGCACAAAACTCTCAAGAGATGAATCTTTGTAAGAGTGAGGCAGAACTATATAGCAGTTTTAGGAGATCTGTTGGTGCCCAGCAAGAGCTCCAAACGGGCTATATGCAGGGATGCAGGCTGTAGTCTCAGGAGAGGAGGTTCACAAAAGTCATTCAGTCCAAGACCTCAAACTGTGttctctactaaaaggaatcaaggttccctagagaaatggctgactccatgtatggtgcagtatattgatcctggaacatcttttttgccagaaagcaaggaagccatcaaagtccaacaggatcacgtcaaaaagacatgaaagtcaacttgaagagataattattaacctagatgagacaatgtaagcatccaaaacaataaagactgcaatggcctgaaatacatcaaatgcaaacaataatctatgagttcataacggtattcagaaaaaaaaa---ctactggtcattagagggaaggttactaggtcactaacttactactctgaaaaatgacttaagatgagaggtagggtggagaattagctatttattcagtctttcctgtacaaacataaatttttagggAGATTGAAGCAGACGAAACAAATCT--GGAAAAATGGAGGTAACTGCTTAATCTGCGGGTTGGGTGCATGGAGGTTCAACATATTTCTTTTGTGTATATTTGAACCCCCTAC--AAAAAAAGCACAAGACAGAATGCGAGCCAAGCAGCTTAGGGTTTAGGCAAGGCTTCTGTCTACAAGAGACACTAGGATATGAGGGGTAGTTTTAGCCCTAATGGGCTGAGCCAACTGGAGGTATATAGGGAAGTGCTAAATTGCAGAGGTATCATGTTGCCCAGCACTTGATCAAATCCTAGATCCTAGG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4241893 1106 + 4392246 AATGCTGGTAGAACACAGGGCCCAAAGGAGCAAAAGTTAACCTAAGCCCAGGTAGAACCTTGTTTACTAGAGTATTAGGCATGGGTTGGGGCAACTATTCTAACCAGAGAAACTGGCTTCAGTGAGGGCAAGTTGGCAATCCAAGGTATAGCATGCATAGGGCTGGCAAAATTCAGGGTGACTGAAGCAAAAGCTTCAGAACCAGAAAGACCACATCT-GGGGTAGAGCACAAAACTCTCAAGAGATGAATCTTTGTAAGAGTGAGGCAGAACTATATAGCAGTTTTAGGAGATCTGTTGGTGCCCAGCAAGAGCTCCAAATGGGCTATATGCAGGGATGCAGGCTGTAGTCTCAGGAGAGGAGGTTCACAAAAGTCATTCAGTCCAAGACCTCAAACTGTGttctctactaaaaggaatcaaggttccctagagaaatggctgactccatgtatggtgcagtatattgatcctggaacatcttttttgccagaaagcaaggaagccatcaaagtccaacaggatcacatcaaaaagacatgaaagtcaacttgaagagataattattaacctagatgagacaatgtaagcatccaaaacaataaagactgcaatggcctgaaatacatcaaatgcaaacaataatctatgagttcataatggtattcagaaaaaaaaa---ctactggtcagtagagggaaggttactaggtcactaacttactactctgaaaagtgacttaagatgagaggtagggtggagaattagctatttattcagtctttcctgtacaaacataaatttttagggAGATTGAAGCagacgaaacaaatct--ggaaaaatggaggtaactgcttaatctgcgggttgggtgcatggaggttcaacatatttcttttgtgtatatttgaaCCCCCTAC--AAAAAAAGCACAAGACAGAATGT-AGCCAAGCAGCTTAGGGTTTAGGCAAGGCTTCTGCCTACAAGAGACACTAGGATATGAGGGGTAGTTTTAGCCCTGATGGGCTGAGCCAACTGGAGGTATATAGGGAGGTGCTAAATTGCTGAGGTATCATGTTGCCCAGCACTTGATCAAATCCTAGATCCTAGG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46812705 1111 - 99891981 AATGCTGGTAGAACACAGGGCCCAAAGGAGCAAAAGTTAACCTAAGCCCAGGTAGAACCTTGTTTACTAGAGTATTAGGCATGGGTTGGGGCAACTATTCTAACCAGAGAAACTGGCTTCAGTGAGAGCAAGTTGGCAATCCAAGGTATGGCATGCACAGGGCTGGTGAAATTCAGGGTGACTGAAACAAAAGCTTCAGAACCAGAAAGACCACATCTGGGGGTAGAGCACAAAACTCTCAAGAGATGAATCTTTGTAAGAGTGAGGCAGAACTATACAGCAGTTTTAGGAGATCTGTTGGTGCCCAGCAAGAGCTCCAAACGGGCTATATGCAGGGATGCAGGCTGTAGTCTCAGGACAGGAGGTTCACAAAAGTCATTCAGTCCAAGACCCCAAACTGTGttctctactaaaaggaatcaaggccccctagagaaatggctgactccatgtatgctgcagtacatagatcctggaacatcttttttgccagaaagcaaggaagacatcaaagtccaacaggatcacgccaaaaagacataagagtcaacttgaacagataattattaacctagatgagacaatgtaagcatccaaaacaaaaaagactgcaatggcctgaaatacatcaaatgcaaacaataatctatgagttcataatggtattcagaaaaaaaaaaacctattggtcactagagtgaaggttaccaggtcacgaacttattaccctgaaaagtgacttaaaatgagaggtaaggtggagaattagctatttattcagtttttcctgtacaaacataaccttttagggAGATTGAAGCagatgaaacgaatct--ggaaaaatggaggtaactgcttaatctgcgggttgggtacatgaaggttcatcatatttcttttgtgtatatttgaaCCCCCTACAGAAAAAAAGCACAAGAC--AATGTGAGCCAAGCAGCTTAGGGTTTAGGCAAGGCTTCTGCCTACAAGAAACACTAGGATATGAGGGGTAGTTTTAGCCCTGATGGGCTGAGCCAACTGGAGGTATATAAGGAGGTGCTAAGTTGCAGAGGTATCATGTTGCCCAGCACTTGATCAAATCCTAGATCCTAGG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55117956 1104 + 185818997 AATGCTGGTAGAACACAGGGCCCAAAGGAGCAAAAGTTAACCTAAGCCCAGGTAGAACCTTGTTTACTAGAGTACTAGGCACGGGGTGTGGCAACTATTCTAACCAAAGA----GGCTCCACTGGGTGTGGGTTAGCAATCCAAAGTATGGCATGTATAGGGCTGGTGGAATTCAGGGGGACTGAAACAAAAGCTTCAGAACCAGAAAGACCACATCTGGGGACACAGCACAAAACTCTCAAGAGATGAATCTTTGTAAGTGTGAGGCAGAACTATGTAACAGTATCAGGAGATCTGCTGGTGCCCAGCGAGAGTTCCAAATGGGCTATATGCAGGGATGCAGGCTGTGGTCTCAGAAGAGGAGGTTCACAAAAGTCATTCAGTCCAAGACCCCAAACTGTGttctctactaaaaggaatcaaggccacctagagaaatggctgactccatgtatggtacagtatattgatcctggaacatcttttttgccagaaagcaaggaagtcatcaaagtccaacaggatcacatcaaaaagacaggagcgtcaacttgaagagataattattaacctcgatgagacaatgtaagcatccaaaacaataaagactgcaatggcctgaaatacatcaaatgcaaacaataatctatgagttcatgatggtattcagaaaaaaaaa---ctattggtcactagagggaaggttactaggtcactaacttactactctgaaaagtgacttaaaatgagaggtagggtggagaattagctatttattcagtttttcccttacaaacataaatttttagggagattaaagcagatgaaacaaatct--ggaaaaatggaggtaactgcttaatcggagggttgggtacgtggaggttcatcctatttcttttgtgtatgtttgaaCCCCCTAC--AAAAAAAGCACAAGACAGAATGTGAGCCAAGCAGCTTAGGGTTCAGGCAAGGCTTCTGCCTACAAGAGACACTAGGATATGAGGGGTAGTTTTAGCCCTGATGGGCTGAGCCAACTGGAGGTACATAGGGAGGTGCTAAATTGCAGAGGTATCATGCTGCCCAGCACTTGATCAAATCCTAGATGCTAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127710306 1104 - 192294377 AATGCTGGTAGAACACAGGGCCCAAAGGAGCAAAAGTTAACCTAAGCCCAGGTAGAACCTTGTTTACTAGAGTATTAGGCACGGGGTGTGGCAACTATTCTAACCAAAGA----GGCTCCACTGGGTGTGGGTTAGCAATCCAAAGTATGGCATGTATAGGGCTGGTGGAATACAGGGTGACTGAAACAAAAGCTTCAGAACCAGAAAGACCACATCTGGGGACACAGCACAAAACTCTCAAGAGATGAATCTTTGTAAGTGTGAGGCAGAACTATGTAACAGTATCAGGAGATCTGCTGGTGCCCAGCGAGAGTTCCAAATGGGCTATATGCAGGGATGCAGGCTGTAGTCTCAGAAGAGGAGGTTCACAAAAGTCATTCAGTCCAAGACCCCAAACTGTGttctctactaacaggaattaaggccccctagagaaatggctgactccatgtatggtacagtatattgatcctggaacatcttttttgccagaaagcaaggaagtcatcaaagtccaacaggatcacatcaaaaagacaggagcgtcaacttgaagagataattattaacctcgatgagacaatgtaagcatccaaaacaataaagacaacaatggcctgaaatacatcaaatgcaaacaataatctatgagttcatgatgatattcagaaaaaaaaa---ctattggtcactagagggaaggttactaggtcactaacttactactctgaaaagtgacttaaaatgagaggtagggtggagaattagctatttattcagtttttcccttacaaacataaatttttagggagattaaaGCagatgaaacaaatct--ggaaaaatggaggtaactgcttaatcggagggttgggtacgtggaggttcatcctatttcttttgtgtatgtttgaaCCCCCTAC--AAAAAAAGCACAAGACAGAATGTGAGCCAAGCAGCTTAGGATTTAGGCAAGGCTTCTGCCTACAAGAGACACTAGGATATGAGGGGTAGTTTTAGCCCTGATGGGCTGAGCCAACTGGAGGTACATAGGGAGGTGCTAAATTGCAGAGGTATCATGCTGCCCAGCACTTGATCAAATCCTAGATACTAGG i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 55234 1103 - 113584 AATGCTGGTAGAGCACAGGGCCCAAAGGAGCAAAAGTTAACCTAAGCCCAGGTAGAAACTTGTTTACTAGAGTATTAGGCATGGGTCGTGGCAACTATTCTAACCAGAGAAATTGGCTCCAGTGAGGGCGGGTTAGCAATCCAAAGTACGGCATGCATAAGGCTGGTGAAATTCAGGGTGATTGAAACAAAAGCTTCAGAACCAGAAAGACCACATCTGGGGGTAGAGCACAAAACTCTCAAGAGATGAATCTTTGTAAGAGTGAGGCAGAACTACATAGCAGTTTTAGGAGATCTGTTAGTGCTCAGCAAGAGCTCCAAACGAGCTATATGCAAAGATGCAGGCTGTAGTCTCAGGAGAGGAGGTTCAC--AAGTCATTCAGTCCAAGATCCCAAACTGTGttctctactaaaaggaatcaagtccccctagagaaatggctgactccatgtacagtacagtatattgatcc--aaacatctttttggccagaaagcaaggaagccatcaaagtctaacaggatcatgtcaaaaagacaggagagtcaacttgaagagataattattaacctagatgagacaatgtaagcatccaaaacaataaagactgcaatggcctgaaatacatcaaatgcaaacaataatctatgagttcacaatggtattcag--aaaaaaa---ctattggtcactagagggaaggttattaggttactaacttactactctgaaaagtgacttaaaatgagaggtagggtggagaattagctatttattcagtttttcccttacaaacatacatttttagggggattgaagaagatgaaacaaatctaaaaaaaaatggaggtaactgcttaatctgcggattgggtacatggaggttcatcatatttcttttgtgcatatttaaaCCCCCTCC--AAAAAAAGCACAAGACAGAATGTGAGCCAAGCAGCTTAGGGTTTAGGCAAGGCTTCTGCCTACAAGAGACACTAGGATATGAGGGGTAGTTTTAGCCCCGATGGGCTGAGCCAACTGGAGGTACATAGCG-GGTACTAAATTGCAGAGGTATCATGTTGCCCAGCACTTGATCGAATCCTAGATGCTAGG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124171724 1105 - 127223203 AATGCTGGTAGAACACAGGGCCCAAAGGAGCAAAAGTTAACCTAAGCCCAGGTAGATCCTTGTTTACTAGAGTACTAGGCACGGGGTGTGGCAACTATTCTAACCAAAGA----GGCTCCACTGGGGGTGGGTTAGCAATCCAAGGTATGGTATGCATAGGGCTGGTGGAATTCAGGGGGACTGAAACAAAAGCTTCAGAACCAGAAAGACTATATCTGGGGACACAGCACAAAACTCTCAAGAGGTGAATCTTTGTAAGAGTGAGGCAGAACTATATAGCAGTTTCAGGAGATCTGCTGGTGCCCAGCGAGAGCTCCAAATGGGCTATATGCAGGGATGCAGGCTGTAGTCTCTGAAGAGGAGGTTCACAAAAGTCATTCAGTCCAAGACCCCAAACTGTGttctctactaaaaggaatcaaggccccctagagaaatggctgactccatgtatggtacagtatattgatcctggaacatcttttttgccagaaagcaaggaagtcatcaaagtccaacaggatcacatcaaaaagacaggagagtcaacttgaagagataattattaacctcgatgagacaatgtaagcatccaaaacaataaagactgcaatggcctgaaatacatcaaatgcaaacaataatctatgagttcatgatggtattcagaaaaaaaaa--tctattggtcactagagggaaggttactaggccactaacttactactctgaaaagtgacttaaaatgagaggtagggtggagaattagctatttattcagttttttccttacaaacataaatttttagggagattaaagtagatgaaacaaatct--ggaaaaatggaggtaactgcttaatcggagggttgggtacatggaggttcatcctatttcttttgtgtatgtttgaaCCCCCTAC--AAAAAAAGCACAAGACAGAATGTGAGCCAAGCAGCTTGGGGTTTAGGCAAGGCTTCTGCCTACAAGAGACACTAGGATATGAGGGGTAGTTTTGGCCCTGATGGGCTGAGCCAACTGGAGGTACATAGGGAGGTGCTAAATTGCAGAGGTATCATGTTGCCCAGCACTTGATCGAATCCTAGATACTAGG i chlSab2.chr21 I 1517 C 0 s manLeu1.NW_012100344v1 65570 1104 - 148006 AATGCTGGTAGAACACAGGGCCCAAAGGAGCAAAAGTTAACTTAAGCCCAGGTAAAACCTTGTTTACTAGAGTATTAGGCATGGGGTGTGGCAACTATTCTAACCAAAGA----GGCTCCACTGGGGGTGGGTTAGCAATCCAAAGTATGGCATGTATAGGGCTGGTGGAATTCAGGGTGACTGAAACAAAAGCTTCAGAACCAGAAAGACCACATCTGGGGACACAGCACAAAACTCTCAAGAGATGAACCTTTGTAAGAGTGAGGCAGAACTATATAACAGTATCAGGAGATCTGCTGGTGCCCAGCGAGAGTTCCAAATGGGCTATATGCAGGGATGCAGGCTGTAGTCTCAGAAGAGGAGGTTCACAAAAGTCATTCAGTCCAAGACCCCAAACTGTGttctctactaaaaggaatcaaggccccctagagaaatggctgactccatgtatggtacagtatattgatcctggaacatcttttttgccagaaagcaaggaagtcatcaaagtccaacaggatcacatcaaaaagacaggagcgtcaacttgaagagataattattaacctcgatgagacaatgtaagcatccaaaacaatgaagactgcaatggcctgaaatacatcaaatgcaaacaataatctatgagttcatgatggtattcagaaaaaaaaa---ctattggtcactagagggaaggttactaggtcactaacttactactctgaaaagtgacttaaaatgagaggtagggtggagaattagctatttattcagtttttcccttacaaacataaatttttagggagattaaagcagatgaaacaaatct--ggaaaaatggaggtaactgcttaatcggagggttgggtacgtggaggttcatcctatttcttttgtgtatgtttgaaCCCCCTAC--AAAAAAAGCACAAGACAGAATGTGAGCCAAGCAGCTTGGGGTTCAGGCAAGGCTTCTGCCTACAAGAGACACTAGGATATGAGGGGTAGTTTTAGCCCTGATGGGCTGAGCCAACTGGAGGTACATAGGGAGGTGCTAAATTGCAGAGGTATCATGCTGCCCAGCACTTGATCGAATCCTAGATGCTAGG i manLeu1.NW_012100344v1 C 0 M 722 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=520073.000000 s hg38.chr3_KI270784v1_alt 42929 258 + 184404 TCTGCTTGGTGGCATGCTTCCTAGGTAGTGGATCTGAGGCTACCTATAGAACTTCCTTTGCAGTCATAGTTCGCTCAGAAACTACAAAAGTGCTTGCTCTTGAAAATGGA----gtctttgtccatttcatgcttctataaaagaataccacagactgcataatttataaaaaggaaaa------------aaggaaggaaagaaaaaaggaagggaggagggaaggagggaa--aaagggaaggaggga------------ag-------gaaaggaaggaagggaaagaa-gga s panTro5.chr1 222326686 254 + 228573443 TCTGCTTGGTAGCATGCTTCCTAGGTAGTGGATCTGAGGCTACCTATAGAACTTCCTTTGCAGTCATAATTCGCTCAGAAACTACAAAAGTGCTTGCTCTTGAAAATGGA----gtctttgtccatttcatgcttcaataaaagaataccacagactgcataatttataaaaaggaaaa------------aaggaaggaaagaaaaaaggaaggaaggagggaaggagggaa--aaagggaaggaggga------------ag-------ga----aaggaagggaaagaa-gga i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4242999 241 + 4392246 TCTGCTTGGTAGCATGCTTCCTAGGTAGTGGATCTGAGGCTACCTATAGAACTTCCTTTGCAGTCATAATTCGCTCAGAAACTACAAAAGTGCTTGCTCTTGAAAATGGA----gtctttgtccatttcatgcttctataaaagaataccacagactgcataatttataa-----------------------------aaggaaaaaaggaaggaaggagggaaggagggaa--aaagggaaggaggga------------ag-------gaaaggaaggaagggaaagaa-gga i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46813816 257 - 99891981 TCTGCTTGGTAGCATACTTCCTAAGTGGTGGATCTGAGGCTACCTATAGAACTTCCTTTGCAGTCATAATTCGCTCAGAAATTACAGAAGTGCTTGCTCTTGAAAATGGA----gcctttgtccatttcatgctgctataaaagaatgccacagactgcataatttacaagaaggaaaa------------aaggaaggagggaaggaggaaag---ggagggaaggaggaaaggaagggaaggaaggga------------ag-------aaagggaaggaatggaaggaa-gca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55119060 282 + 185818997 ACTGCTTGGTAGCATGCTTCCTAGGTGGTGGATCTGAGGCTACCTACAGAACTTCCTTTGCAGTCGTAATTCGCTCAGAAACTACAAAAGGGCTTGCTCTTGAAAATGGAGTCGgtctttgtccatttcatgctgctataaaagaatgccacagactgcataatttacgagaaggaaaa------------aaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaa--ggaaggaaggaaggaaggaaggaaggaaagggaagggaagggaaggaagggagggaaggga i rheMac8.chr3 C 0 I 58 s macFas5.chr3 127711410 281 - 192294377 ACTGCTTGGTAGCATGCTTCCTAGGTGGTGGATCTGAGGCTACCTACAGAACTTCCTTTGCAGTCGTAATTCGCTCAGAAACTACAAAAGGGCTTGCTCTTGAAAATGGAGTCGgtctttgtccatttcatgctgctataaaagaatgccacagactgcataatttacgagaaggaaaaaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaa--ggaaggaaggaagga------------aagggaagggaagggaaggaagggagggaa-gga i macFas5.chr3 C 0 I 58 s cerAty1.NW_012005081v1 56337 247 - 113584 ACTGTTTGGCAGCATGCTTCCTAGGTAGTGGATCTGAGGCTACCTATAGAACTTCCGTTGCAGTCATAATTCGCTCAGAAACTACAAAAGGGCTTGCTCTTGAAAATGAAGTCtgtctttgtctatttcatgctgctataaaagaatgccacagactgcataatttatacaaagaaaaa------------caggaatgaaggaa--------------aaaaaaggaaggaa--ggagggaaggagaga------------aa--------aagggaaggagggaaggaaa-gga i cerAty1.NW_012005081v1 C 0 I 40 s chlSab2.chr21 124172829 265 - 127223203 ACTGCTTGGTAGCATGCTTCCTAGGTGGTGGATCTGAGGCTACCTACAGAACTTCCTTTGTAGTCATAATTCGCTCAGAAACTACAAAAGGGCTTGCTCTTGAAAATGGAGTCGgtctttgtccatttcatgctgctataaaagaatgccacagactgcataatttatgagaaggaaaa------------aAGAaaggaaggaa----ggaaggaaggaaggaaggaaggaa--ggaaggaaggaagga------------aggggaagggaagggaaggaagggagggaa-gga i chlSab2.chr21 C 0 I 285 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e manLeu1.NW_012100344v1 66674 722 - 148006 M e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=170088.000000 s hg38.chr3_KI270784v1_alt 43187 128 + 184404 -aaggaaggaagggaaagagagaaagagggaaggaggaagggagggaaggagggagggagggagagagagagggagggaggggaagggaagaaaa------------------gggaagagaagggaaaggagg-----------------------------------aagaaaaggaaag s panTro5.chr1 222326940 108 + 228573443 -aaggaaggaagggaaagagagaaagagggaaggaggaagggagggaag--------------------gagggagggaggggaagggaagaaaa------------------gggaggagaagggaaaggagg-----------------------------------aagaaaaggaaag i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4243240 128 + 4392246 -aaggaaggaagggaaagagagaaagagggaaggaggaagggagggaaggagggagggagggagagagagagggagggaggggaagggaagaaaa------------------gggaggagaagggaaaggagg-----------------------------------aagAAAAGGAAAG i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46814073 141 - 99891981 -aaggaaaggaagga---agggaaagagggaaggaggaagggagggaag----gaggtagggagagggagagggagggaggggaagggaacagaa------------------gggaggagcagggaaaggaggaaga---------------aaaggaaaggaaaggaaagaaaaggaaag i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55119400 158 + 185818997 aagggaaggaagggaaagagggaaagagggaaggaggaagggagggaag----gagggagggggagagagaggaagggaggggaaaggaagagaa------------------cggaagaacagggaagggaagggaa--gcgaagggaacggaaaggaacggaacggaaaggaacggaaag i rheMac8.chr3 I 58 I 8 s macFas5.chr3 127711749 158 - 192294377 aagggaaggaagggaaagagggaaagagggaaggaggaagggagggaag----gagggagggggagagagaggaagggaggggaaaggaagagaa------------------cggaagaacagggaagggaagggaa--gcgaagggaacggaaaggaacggaacggaaaggaaaggaaag i macFas5.chr3 I 58 I 8 s cerAty1.NW_012005081v1 56624 178 - 113584 aagaaaggaagggaaggaagggaaagagggaaggaggaagggagagaag----gaggcagggagagagagagagtgggaggggaagggaagagaagggaggagaagggaagagaggaagaaaagggaggagaagggaaaggaggaaggaaaggaaaggaaaggaaaggaaaggaaaggaaag i cerAty1.NW_012005081v1 I 40 I 36 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e manLeu1.NW_012100344v1 66674 722 - 148006 M e chlSab2.chr21 124173094 285 - 127223203 I e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=76717.000000 s hg38.chr3_KI270784v1_alt 43315 40 + 184404 gaaaggaataaattttatttcttaacagttctggatgtta s panTro5.chr1 222327048 40 + 228573443 gaaaggaataaattttatttcttaacagttctggatgtta i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4243368 40 + 4392246 GAaaggaataaattttatttcttaacagttctggatgtta i gorGor5.CYUI01015383v1 C 0 C 0 s nomLeu3.chr17 46814214 38 - 99891981 gaaaggaaGAAATTTTATTCTT--ACAGTTCTGGATGTTA i nomLeu3.chr17 C 0 M 285 s rheMac8.chr3 55119566 39 + 185818997 Gaaaggaagaaactttatttctt-gtagttctggatgcta i rheMac8.chr3 I 8 C 0 s macFas5.chr3 127711915 39 - 192294377 Gaaaggaagaaactttatttctt-gtagttctggatgcta i macFas5.chr3 I 8 C 0 s cerAty1.NW_012005081v1 56838 39 - 113584 aaaggaaaggaaatttatttctt-acagttctggatgcta i cerAty1.NW_012005081v1 I 36 C 0 s chlSab2.chr21 124173379 39 - 127223203 Gaaaggaagaaactttatttctt-atagttctggatgcta i chlSab2.chr21 I 285 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e manLeu1.NW_012100344v1 66674 722 - 148006 M e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=312861.000000 s hg38.chr3_KI270784v1_alt 43355 174 + 184404 ggaagtccaaggttgaggggcctgcatctggtaagggtcttcttgctgcatcatcccactacagaaggcagaaggaaaagagagtgcaagaaagcaagagggcaaaaggggctgaactctgttttataataagcccactctgtgattactaatctattaccacaataacaacat s panTro5.chr1 222327088 174 + 228573443 ggaagtccaaggttgaggggcctgcatctggtaagggtcttcttgctgcatcatcccactacagaaggcagaaggaaaagagagtgcaagaaagcaagagggcaaaaggggctgaactctgttttataataagcccactctgtgattactaatctattaccacaataacaacat i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4243408 174 + 4392246 ggaagtccaaggttgaggggcctgcatctggtaagggtcttcttgctgcatcatcccactacagaaggcagaaggaaaagagagtgcaagaaagcaagagggcaaaaggggctgaactctgttttataataagcccactctgtgattactaatctattaccacaataacaacat i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55119605 174 + 185818997 tgaaatccaaggttgaggggcctgcatctagtagggatcttcttgctgcatcatcccacgacagaaggcagaaggacaagagagtgcaagacagcaagagggcaaaaggggctgaactctcttttataataagaccactctgtgattacttatctattaccataataacaacat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127711954 174 - 192294377 tgaaatccaaggttgaggggcctgcatctagtagggatcttcttgctgcatcatcccacgacagaaggcagaaggacaagagagtgcaagacagcaagagggcaaaaggggctgaactctcttttataataagaccactctgtgattacttatctattaccataataacaacat i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 56877 174 - 113584 gaaattccaaggttgaggggactgcatctggtaagggtcttcttgctgcatcatcccacgacaaaaggcagaaggaaaagagactgcaagaaagcaagacagcaaaaggggctaaactctcttttataataaacccactctgtgattacttatctattaccacaataacaacat i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124173418 174 - 127223203 tgaaatccaaggttgaggggcctgcatctagtagggatcttcttgctgcatcatcccacgacagaaggcagaaggacaagagagtgcaagacagcaagagggcaaaaggggctgaactctcttttataataagaccactctgtgattacttatctattaccataataacaacat i chlSab2.chr21 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e manLeu1.NW_012100344v1 66674 722 - 148006 M e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e nomLeu3.chr17 46814252 285 - 99891981 M e panPan2.chr7 56735359 33229 + 162613886 I a score=771605.000000 s hg38.chr3_KI270784v1_alt 43529 317 + 184404 taactcattcatgaaggctattttattaggccccacatcccaactgttgcattgaggattgagtttccagcacataaactttgggggacacatttaaaccatagcaGAGCACTTAGGTTAATTCAACTAAGAGGAGCTGGGAAAATCAAAGGCATGAGAAAGACAGCAAAAGCTAGCAGAGAGAAATGCATAGGTTAAGGAAAAAAGTCACAGTGAATCCTGTAGTGCAGGCTACTTTATCAAAAGCACCTAAAAAAGATCTCATTAACTCCCCCAGCTCACCTCCACGCACATCTAAAGAGCCACACACAGCACCA s panTro5.chr1 222327262 317 + 228573443 taactcattcatgaaggctattttattaggccccacatcccaactgttgcattgaggattgagtttccagcacataaactttgggggacacatttaaaccatagcaGAGCACTTAGGTTAATTCAACTAAGAGGAGCTGGGAAAATCAAAGGCATGAGAAAGACAGCAAAAGCTAGCAGAGAGAAATGCATAGGTTAAGGAAAAAAGTCACAGTGAATCCTGTAGTGCAGGCTACTTTATCAAAAGCACCTAAAAAAGATCTCATTAACTCCCCCAGCTCACCTCCACCCACATCTAAAGAGCCACACACAGCACCA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4243582 316 + 4392246 taactcattcatgaaggctattttattaggccccacatcccaactgttgcattgaggattgagtttccagcacataaactttgggggacacatttaaaccatagcaGAGCACTTAGGTTAATTCAAC-AAGAGGAGCTGGGAAAATCAAAGGCATGAGAAAGACAGCAAAAGCTAGCAGAGAGAAATGCATAGGTTAAGGAAAAAAGTCACAGTGAATCCTGTAGTGCAGGCTACTTTATCAAAAGCACCTAAAAAAGATCTCATTAACTCCCCCAGCTCACCTCCACCCACATCTAAAGAGCCACACACAGCACCA i gorGor5.CYUI01015383v1 C 0 C 0 s rheMac8.chr3 55119779 317 + 185818997 taactcattcatgagggctctcttattaggccccacatcccaactgttgcattgaggattgagtttccagcacataaactttgggggacacacttaaaccacagcaGAGCACTTATGTAAATTCAACCACGAGGAGCTGGGAAAATCAAAGGCATGAGAAAGACAGCAAAGGCTAGCAGAGAAATACGCGCAGGTTAAGGAAAAAAGTCAGAGTGAATCCTGTAGTGCAGGCTACTTTATCAAAAGCACCTAAAAAAGATCTCATTAACTGCCCCAACTCACCTCCACCCACATCTAAAGGGCCACACACAGCACCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127712128 317 - 192294377 taactcattcgtgagggctctcttattaggccccacatcccaactgttgcattgaggattgagtttccagcacataaactttgggggacacacttaaaccacagcaGAGCACTTATGTAAATTCAACCACGAGGAGCTGGGAAAATCAAAGGCATGAGAAAGACAGCAAAGGCTAGCAGAGAAATACGCGCAGGTTAAGGAAAAAAGTCAGAGTGAATCCTGTAGTGCAGGCTACTTTATCAAAAGCACCTAAAAAAGATCTCATTAACTGCCCCAACTCACCTCCACCCACATCTAAAGGGCCACACACAGCACCA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 57051 316 - 113584 taactcattcatgagggctctcttattaggccccacatcccaactgttgcattgaggattgagtttccagcacataaactttggagaatgtatttaaaccacagcaGAGCACTTACGTAAATTCAACCAAGTGGAGCTGGGAAAATCAAAGGCATGAGAAAGATAGCAAAGGCTAGCAGAGAAATATGCTCAGG-TAAGGAAAAAAGTCACAATGAATCCAGTAGTGCAGGCTACTTTATCAAAAGCACCTAAAAAAGATCTCATTAACTGCCCCAACTCACTTCCACCCACATCTAAATGGCCACACACAGCACCA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124173592 317 - 127223203 taactcattcatgagggctctcttattaggccccacatcccaactgttgcattgaggattgagtttccagcacataaactttgggggacacacttaaaccacagcaGAGCACTTACGTAAATTCAACCAAGAGGAGCTGGGAAAATCAAAGGCATGAGAAAGACAGCAAAGGCTAGCAGAGAAATACGCACAAGTTAAGGAAAAAAGTCACAGTGAATCCTGTAGTGCAGGCTACTTTATCAAAAGCACCTAAAAAAGATCTCATTAACTGCCCCAACTCACCTCCACCCACATCTAAAGGGCCACACACAGCGCCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 67400 317 - 148006 taactcattcatgagggctctcttattaggccccacatcccaactgttgcattgaggattgagtttccagcacataaactttgggggatacatttaaaccacagcaGAGCACTTATGTAAATTCAACCACGAGGAGCTGGGAAAATCAAAGGCATGAGAAAGACAGCAAAGGCTAGCAGAGAAATACGCACAAGTTAAGGAAAAAAGTCACAGTGAATCCTGTAGTGCAGGCTACTTTATCAAAAGCACCTAAAAAAGATCTCATTAACTGCCCCAACTCACCTCCACCCACATCTAAAGGGCCACACACAGCGCCA i manLeu1.NW_012100344v1 M 722 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e nomLeu3.chr17 46814252 285 - 99891981 M e panPan2.chr7 56735359 33229 + 162613886 I a score=2489277.000000 s hg38.chr3_KI270784v1_alt 43846 836 + 184404 CCAAAGGCAGCACAATGAGAACAGCATTCTCCTCAACAGACAAGCTGGGAGTATCTAGACACCTGACCTCAATAGCTCCAGAACAGCCCTAAAACATTTCCTCCCTAACCACCACTCAAGTCACCAGCTTGGAAAGTATTAAGAAAACCCAAATCCTGACACACCACTATGAAACAACTTAAAACAGCAAAGAACAACCCATTTAAACAGCAATGCCAGCTGTT-GGGAAAAAAAGGAACAATGAGTAGAGGAGAAACAGACCTCTCGGGGTCCACCAAGACCCAGTCTCTCAGCTTCAGCACTTTTAAATGCAGAATCCATACCCCTCTGGGGCCTGTGGAGCTCCACAAGGCATGTCGTCCTCAAAGATAAATGAGCAGGCAAGCTGGCTAGAAAACCACTAAGGGTATTTATTCTTTAAAGAATCTTTATAGGGTCAAAGAAGAATGGGTCCTAACTGGCTATGTGAACTCCCCACAGATTCTGAGGATGATGTCAGTATCCCTTTCCAGATGTGTTTAACACTTTGCAGTCACTTGTATTCCTGCCACTGAGTGCCAGTGCTTTGCTAATTTGAACTGATTCCAGCTCACGCTGACCCCAGCTCCCTGGAT---GTTACCATTAGCCAAGACTGACACCCATACTGTACCCTTTCAAAGAGTCCTAAAAACAGCTCTTCACCTACTCTTCCAAGACAAGTAAAAATGACTGCCAAAGAAATGGGGAAAAAAGATTCAGAGAGTGAAAACAATTAATATACTAACAAGAGAGCAAAAAGCAAAGGGGGAGGAGAAACTAGGAAAATCATATATGGGCTCTCACCTATTTCCAAAGCT s panTro5.chr1 222327579 835 + 228573443 CCAAAGGCAGCACAATGAGAACAGCATTCTCCTCAACAGACAAGCTGGGAGTATCTAGACACCTGACCTCAATAGCTCCAGAACAGCCCTAAAACATTTCCTCCCTAACCACCACTCAAGTCACCAGCTTGGAAAGTATTAAGAAAACCCAAATCCTGACACACCACTATGAAACAACTTAAAACAGCAAAGAACAACCCATTTAAACAGCAATGCCAGCTGTT-GGGAAAAAAAGGAACAATGAGTAGAGGAGAAACAGACCTCTCGGGGTCCACCAAGACCCAGTCTCTCAGCTTCAGCACTTTTAAATGCAGAATCCATACCCCTCTGGGGCCTGTGGAGCTCCACAAGTCATGTCGTCCTCAAAGATAAATGAGCAGGCAAGCTGGCTAGAAAACCACTAAGGGTA-TTATTCTTTAAAGAATCTTTATAGGGTCAAAGAGGAATGGGTCTTAACTGGCTATGTGAACTCCCCACAGATTCTGAGGATGATGTCAGTATCCCTTTCCAGATGTGTTTAACACTTTGCAGTCACTTGTATTCCTGCCACTGAGTGCCAGTGCTTTGCTAATTTGAACTGATTCCAGCTCACGCTGACCCCAGCTCCCTGGAT---GTTACCATTAGCCAAGACTGTCACCCATACTGTACCCTTTCAAAGAGTCCTAAAAACAGCTCTTCACCTACTCTTCCAAGACAAGTAAAAATGTCTGCCAAAGAAATGGGGAAAAAAGATTCAGAGAGTGAAAACAATTAATATACTAACAAGAGAGCAAAAAGCAAAGGGGGAGGAGAAACTAGGAAAATCATAGATGGGCTCACACCTATTTCCAAAGCT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015383v1 4243898 832 + 4392246 CCAAAGGCAGCACAATGAGAACAGCATTCTCCTCAACAGAC-AGCTGGGAGTATCTAGACACCTGACCTCAATAGCTCCAGAACAGCCCTAAAACAGTTCCTCCCTAACCACCACTCAAGTCACCAGCTTGGAAAGTATTAAGAAAACCCAAATCCTGACACACCACTATGAAACAACTTAAAACAGCAAAGAACAACCCATTTAAACAGCAATGCCAGCTGCT-GGGAAAAAAAGGAACAATGAGTAGAGGAGAAACAGACCTCTTGGGGTCCA-CAAGACCCAGTCTCTCAGCTTCAGCACTTTCAAATGCAGAATCCATACCCCTCTGGGGCCTGTGGAGCTCCACAAGGCATGTCGTCCTCAAAGATAAATGAGCAGGCAAGCTGGCTAGAAAACCACTAAGGGTA-TTATTCTTTAAAGAATCTTTATAGGGTCAAAGAGGAATGGGTCTTAACTGGCTATGTGAACTCCCCACAGATTCTGAGGATGATGTCAGTATCCCTTTCCAGATGTGTTTAACACTTTGCAGTCACTTGTATTCCTGCCACTGAGTGCCAGTGCTTTGCTAATTTGAACTGATTCCAGCTCACGCTGACCCCAGCTCCCTGGAT---GTTACCATTAGCCAAGACTGTCACCCATACTGTACCCTTTCAAAGAGTCCTAAAAACAGCTCTTCACCTACTCTTCCAAGACAAGTAAAAATGTCTGCCAAAGAAATGGGGAAAAAAGATTCAGAGAGTGAAAACAATTAATATACTAACAAGAGAGTAAAAAG-AAAGCGGGAGGAGAAACTAGGAAAATCATATGTGGGCTCACACCTATTTCCAAAGCT i gorGor5.CYUI01015383v1 C 0 N 0 s nomLeu3.chr17 46814539 836 - 99891981 CCAAAGGCAGCACAATGAGAACAGCATTCTCGTTAATAGACGAGCTGTGGGTATCCAGACACGTGACCTCAACAGCTCCAGAACAGCCCTAAAACAGCTCCTCCCTAACCATCACTCAAGTCACCAGCTGGGAAAATATTCAGAAAACCCAAATCTTGACACACCACTATGAAACAACTT-AAACAGCAAAGAACAACCCATTTAAACAGCAATGCCAGCTGCT-GGGAAAAAAAGGAACAATGAGTAGAGGAAAAGCAGACCTCTTGGGGTCCACCAAGATCCAGTCTCTCAGCTTCAGCACTTTCAAATGCAGAATCCATACCCCTCTGGGGCCTGTGGAGCTCCACGAGGCAGGTTGTCCTCAAAGATAAATGAGCAGCCAAGCTGGCCAGAAAACCACTAAGCGTA-TTATTTTTTAAAGAATCTTTATAGGGTCAAAGAGGAATGGGTCTT-ATAGGCGATGTCTATTCCCCACAGATTCTGAGGATGATATCAGTATCCCTTTCCAGATGTGTTTAACACTTTGTGGTCGCTTGTATTCCTGCCACTGAGTGCCAGTGCTTTGCTAATTTGAACTGATTCCAACTCACGCTGACCCTGGCTCCCTGGATCTGGTTACCATTAGCCAAGACTGTCATCCATACTGTACCCTTTTAAAGAGTCCTAAAAACAACTCTTCACCTACTCTTCCAAGACAAGTAAAAATGTCTGCCAAAGAAATGGAGAAAAAAGATTGAGAGAGAGAAAACAATTAACATACTAACAAGAGAGCAGAAAGCGAAGCGGGAGGAGAAACTAGGAAAATCATATGTGGGCTCACACCTATTTCCAAAGCT i nomLeu3.chr17 M 285 C 0 s rheMac8.chr3 55120096 828 + 185818997 CCAAAGGCAGCACAATGAGAACAGCATTCTCCTCAACAGACGAGCTGTGAGTATCCATACACCTAA-CTCAATAGCTCCAGAACAGCCCTAAAACAGCTCCTCCCTAACCACCACTCAAGTCACCAGCTGGGAAAGTATTCAGAAAACCCAAATCCT-ACACACCACTACCAAACAAATT-AAACGGCAAAGAACAACCCATTTAAACAGCAATGCCAGTTGCTGGGGAGAAAAAGGAACAATGAGTAAAGGAAAAGCAGACCTCTTGGGGTCCACCAAGACCGAGTTTCTCAGCTTCAGCACTTTCAAATGTAGAAT-------CCTCTGGGGATTGTGGAGCTCCACGAGGCATGTTGTCCTCAAAGATAAATAAGCAGGCAAGCTGGCTAGAAAATTGCTAAGGGTA-TTATTCTTCAAAGAATCTTTATAGGGTCAAACAGGAATGTGTCTT-ACGGGCTATGTGTATTCCCCACAGATTCTGAGGATGATGTCAGTATCCCTTTCCAGATGTGTTGAATAATTTGCGGTCACTTGTATTCCTGCCACTGAGTACCATAATTTTGCTAATTTGAACTGATTCCAGCTCACACTGACCCCGGCTCCCTGGATCTGGTTACCATTAGCCAAGACTGTCATCCATATTGTACCCTTTCAAAGAGTCCTAAAAAGAGCTCTTCACCTACTCTTCCAAGACAAGTAAAAATGTCTGCCAAAGAAATGGGGAAAAAAGATTGAGAGAGAGAAAACAATTAACATACTAACAAGAGAGCAAAAAGCGAAGGGGAAGGAGAAACTAGGAAAATCATACATGGGCTCACACCTATTTCCAAAGCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127712445 828 - 192294377 CCAAAGGCAGCACAATGAGAACAGCATTCTCCTCAACAGACGAGCTGTGAGTATCCATACACCTAA-CTCAATAGCTCCAGAACAGCCCTAAAACAGCTCCTCCCTAACCACCACTCAAGTCACCAGCTGGGAAAGTATTCAGAAAACCCAAATCCT-ACACACCACTACCAAACAAATT-AAACGGCAAAGAACAACCCATTTAAACAGCAATGCCAGTTGCTGGGGAGAAAAAGGAACAATGAGTAAAGGAAAAGCAGACCTCTTGGGGTCCACCAAGACCGAGTTTCTCAGCTTCAGCACTTTCAAATGTAGAAT-------CCTCTGGGGATTGTGGAGCTCCACGAGGCATGTTGTCCTCAAAGATAAATAAGCAGGCAAGCTGGCTAGAAAATTGCTAAGGGTA-TTATTCTTCAAAGAATCTTTATAGGGTCAAACAGGAATGTGTCTT-ACGGGCTATGTGTATTCCCCACAGATTCTGAGGATGATGTCAGTATCCCTTTCCAGATGTGTTGAATAATTTGCGGTCACTTGTATTCCTGCCACTGAGTACCATAGTTTTGCTAATTTGAACTGATTCCAGCTCACACTGACCCCGGCTCCCTGGATCTGGTTACCATTAGCCAAGACTGTCATCCATATTGTACCCTTTCAAAGAGTCCTAAAAAGAGCTCTTCACCTACTCTTCCAAGACAAGTAAAAATGTCTGCCAAAGAAATGGGGAAAAAAGATTGAGAGAGAGAAAACAATTAACATACTAACAAGAGAGCAAAAAGCGAAGGGGAAGGAGAAACTAGGAAAATCATACATGGGCTCACACCTATTTCCAAAGCT i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 57367 831 - 113584 CCAAAGGCAGCACAATGAGAACAGCATT---CTCAACAGACGAGCTGTGAGTATCCATATACCCGA-CTCAACAGCTCCAGAACAGCCCTAAAACAGCTCCTCCCTAACCACCACTCAAGTCACCAGCTGGGAAACTATCCAGAAAATCCAAATCCTGACACACCACTACCAAACAACTT-AAACAGCAAAGAACAACCCATTTAAACAGCAATGCCAGCTGCC-AGGAAAAAAAGGAACAATGAGTAGAGGAAAAGCAGACCTCTTGGGGTCTACCAAGATCCAGTCTCTCAGCTTTAGCACTTTCAAATGCAGAATTCATACACCTCTGGGGCCTGTGGAGCTCCACAAGGCATGTTGTCCTCAAAGATAAACAAGCAGGCAAGCTGGCTAGAAAACCGCTAAGGGTA-TTATTCTTTAAAGAACCTTTATAGGGTCAAAAAGGAATGGGTCTT-ACAAGCTATGTGTATTCCCCACAGATTCTGAGGATGATGTCAGTATCCCTTTCCAGATGTGTTTAACACTTTGCGGTCACTTGTATTCCTGCCACTGAGTGCCAGTGCTTTGCTAATTTGCACTGATGCTAGCTCACGCTGACCCTGGCTCCCTCGATCTGGTTACCATTAGCCAAGACTGTCATCCATACTGTACCCTTTCAAAGAATCCTAAAAACAGCTCTTCACCTACTCTTCCAAGACAAGTAAAAATGTCTGCCAAAGAAATGAGGAAAAAAGATTCAGAGAGAAAAAACAATTAACATACTAACAAGAGAGCAAAAAGCGAAGGGGGAGGAGAAACTAGGAAAATCATATATGGGCTCACACCTATATCCAAAGC- i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124173909 829 - 127223203 CCAAAGGCAGCACAATGAGAACAGCATTCTCCTCAACAGACGAGCTGTGAGTATCCATACACCTAA-CTCAACAGCTCCAGAACAGCCCTAAAACAGCTCCTCCCTAACCACCACTCAAGTCACCAGCTGGGAAAGTATTCAGAAAACCCAAATCCTGACACACCACTTCCAAAAAAATT-AAACGGCAAAGAACAACCCATTTAAACAGCAATGCCAGTTGCCAGGAAAAAAAAGGAACAATGAGTAGAGGAAAAGCAGACCTCTTGGGGTCCACCAAGACCAAGTTTCTCAGCTTCAGCACTTTCAAATGCAGAAT-------CCTCTGGGGCCTGTGGAGCTCCACGAGGCATGTTGTCCTCAAAGATAAATAAGCAGGCAAGCTGGCTAGAAAATTGCTAAGGGTA-TTATTCTTCAAAGAATCTTTATAGGGTCAAACAGGAATGTGTCTT-ACGGGCTATGTGTATTCCCCACAGATTCTGAGGATGATGTCAGTATCCCTTTCCAGATGTGTTGAACAATTTGCGGTCACTTGTATTCCTGCCACTGAGTACCAGTGCTTTGCTAATTTGAACAGATTCCAGCTCACACTGACCCCGGCTCCCTGGATCTGGTTACCATTAGCCAAGACTGTCATCCATATTGTACCCTTTCAAAGAGTCCTAAAAAGAGCTCTTCACCTACTCTTCCAAGACAAGTAAAAATGTCTGCCAAAGAAATGGGGAAAAAAGATTGAGAGAGAGAAAACAATTAACATACTAACAAGAGAGCAAAAAGCGAAGGGGAAGGAGAAACTAGGAAAATCATACATGGGCTCACACCTATTTCCAAAGCT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 67717 828 - 148006 CCAAAGGCAGCACAATGAGAACAGCATTCTCCTCAACAGACAAGCTGTGAGTATCCATACACCTGA-CTCAACAGCTCCAGAACAGCCCTAAAACAGCTCCTCCCTAACCACCACTCAAGTCACCAGCTGGGAAAGTATTCAGAAAACCCAAATCCT-ACACACCACTACCAAACAAATT-AAATGGCAAAGAACAACCCATTTAAACAGCAATGCCAGTTGCTGGGAAAAAAAAGGAACAATGAGTAGAGGAAAAGCAGACCTCTTGGGGTCCACCAAGACCGAGTTTCTCAGCTTCAGCACTTTCAAATGTAGAAT-------CCTCTGGGGACTGTGGAGCTCCACGAGGCATGTTGTCCTCAAAGATAAATAAGCAAGCAAGCTGGCTAGAAAATTGCTAAGGGTA-TTATTCTTCAAAGAATCTTTATAGGGTCAAACAGGAATGTGTCTT-ACGGGCTATGTGTATTCCCCACAGATTCTGAGGATGATGTCAGTATCCCTTTCCAGATGTGTTGAATAATTTGCGGTCACTTGTATTCCTGCCACTGAGTACCAGTGTTTTGCTAATTTGAACTGATTCCAGCTCACACTGACCCCGGCTCCCTGGATCTGGTTACCATTAGCCAAGACTGTCATCCATATTGTACCCTTTCAAAGAGTCCTAAAAAGAGCTCTTCACCTACTCTTCCAAGACAAGTAAAAATGTCTGCCAAAGAAATGGGGAAAAAAGATTGAGAGAGAGAAAACAATTAACATACTAACAAGAGAGCAAAAAGCGAAGGGGGAGGAGAAACTAGGAAAATCATACATGGGCTCACACCTATTTCCAAAGCT i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=277214.000000 s hg38.chr3_KI270784v1_alt 44682 102 + 184404 GGGCTAATGTCCTTTTGCTTGTGTCTGAATAAGGCACCAATTTTAAGCTGCTAATG-AAAAAAAAAGAAAAAGAGAA----AGAAGCAGGCCCAggctgggcgcagt s panTro5.chr1 222328414 103 + 228573443 GGGCTAACGTCCTTTTGCTTGTGTCTGAATAAGGCACCAATTTTAAGCTGCTAATGAAAAAAAAAAGAAAAAGAGAA----AGAAGCAGGCCCAggctgggcgcagt i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 35043 102 - 1329735 GGGCTAATGTCCTTTTGCTTGTGTCTGAATAAGGCACCAATTTTAAGCTGCTAATG-AAAAAAAAAGAAAAAGAGAA----AGAAGCAGGCCCAggctgggcgcagt i gorGor5.CYUI01015648v1 N 0 C 0 s nomLeu3.chr17 46815375 101 - 99891981 GGACTAACATCCTTTTGCTTGTGTCTGAATAAGGCATCAATTTTAAGCTGCTAACG--AAAAAAAAGAAAAAGAGAC----AGAAGCAGGCCTAggccgggcgcggt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55120924 107 + 185818997 GGGCTAATATTCTTTTGCTTGTGTCTGAGTAAGTCACCAATTTTAACCTGCTaatgaaaaagaaaagaaaaagagaatgaaagaagCAGGCCCAGGACGGGCACGGT i rheMac8.chr3 C 0 I 15 s macFas5.chr3 127713273 107 - 192294377 GGGCTAATATTCTTTTGCTTGTGTCTGAGTAAGTCACCAATTTTAACCTGCTAATGAaaaagaaaagaaaaagagaatgaaagaaGCAGGCCCAGGACGGGCACGGT i macFas5.chr3 C 0 I 5 s cerAty1.NW_012005081v1 58198 97 - 113584 GGGCTAATATTCTTTTGCTTATGTCTGAATAAGGCACCAATTTTAAGCTGCTAATGAAAA--AAAAGAAAAAG--------AGAAGCAGGCCCAggccaggcacggt i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124174738 103 - 127223203 GGGCTAATATTCTTTTGCTTGTGTCTGAGTAAGTCACCAATTTTAACCTGCTAATGAAAAAAA----AAAAAGAGAATGAAAGAAGCAGGCCCAGGCCGGGCACGGT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 68545 107 - 148006 GGGCTAATATTCTTTTGCTTGTGTCTGAGTAAGTCACCAATTTTAACCTGCTaatgaaaaaaaaaagaaaaagagaatgaaagaagCAGGCCCAGGCCGGGCACGGT i manLeu1.NW_012100344v1 C 0 I 15 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=2100.000000 s hg38.chr3_KI270784v1_alt 44784 1 + 184404 g s panTro5.chr1 222328517 1 + 228573443 g i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 35145 1 - 1329735 g i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46815476 1 - 99891981 g i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127713385 1 - 192294377 G i macFas5.chr3 I 5 C 0 s cerAty1.NW_012005081v1 58295 1 - 113584 g i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124174841 1 - 127223203 G i chlSab2.chr21 C 0 I 15 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e rheMac8.chr3 55121031 15 + 185818997 I e manLeu1.NW_012100344v1 68652 15 - 148006 I e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=6609.000000 s hg38.chr3_KI270784v1_alt 44785 8 + 184404 gctcatgc s panTro5.chr1 222328518 8 + 228573443 gctcatgc i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 35146 8 - 1329735 gctcatgc i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46815477 8 - 99891981 gctcatgc i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127713386 8 - 192294377 ATTAAAGT i macFas5.chr3 C 0 I 1 s cerAty1.NW_012005081v1 58296 8 - 113584 gctcacgt i cerAty1.NW_012005081v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e rheMac8.chr3 55121031 15 + 185818997 I e manLeu1.NW_012100344v1 68652 15 - 148006 I e chlSab2.chr21 124174842 15 - 127223203 I e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=2800.000000 s hg38.chr3_KI270784v1_alt 44793 1 + 184404 c s panTro5.chr1 222328526 1 + 228573443 c i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 35154 1 - 1329735 c i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46815485 1 - 99891981 c i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55121046 1 + 185818997 c i rheMac8.chr3 I 15 C 0 s macFas5.chr3 127713395 1 - 192294377 c i macFas5.chr3 I 1 C 0 s cerAty1.NW_012005081v1 58304 1 - 113584 c i cerAty1.NW_012005081v1 C 0 C 0 s manLeu1.NW_012100344v1 68667 1 - 148006 c i manLeu1.NW_012100344v1 I 15 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e chlSab2.chr21 124174842 15 - 127223203 I e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=760415.000000 s hg38.chr3_KI270784v1_alt 44794 258 + 184404 tgtaatcccagcactttgggaggccgaggcgggtggatcacccaaggtcaggagttctagaccagcctggtcaacatggtgaaacaccatctctactaaaaatacaaaaaattagccaagcatggtggcgcatgcctgtaaatccagctactaaggaagctgaggcaggagaattgcttgaacctggaaggcagagaatgtggtgacctgagatcacgtcattgccctcaagccACGGCAATGAGAACAAAATTCGGT s panTro5.chr1 222328527 258 + 228573443 tgtaatcccagcagtttgggaggccgaggcgggtggatcacccaaggtcaggagttctagaccagcctggtcaacatggtgaaacaccatctctactaaaaatacaaaaaattagccaggcatggtggcgcatgcctgtaaatccagctactcaggaggctgaggcaggagaattgcttgaacctggaaggcagagaatgtggtgacctgagatcacgccattgccctcaagccacgccaatgagaacaaaattcggt i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 35155 258 - 1329735 tgtaatcccagcactttgggaggccgaggcgggtggatcacccaaggtcaggagttctagaccagcctggtcaacatggtgaaacaccatctctactaaaaatacaaaaaattagccaggcatggtggcgcatgcctgtaaatccagctactaaggaggctgaggcaggagaattgcttgaacctggaaggcagagaatgtggtgacctgagatcacgtcattgccctcaagccacggcaatgagaacaaaattcggt i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46815486 257 - 99891981 tgtaatcctagcactttgggaggccaacacgggtggatcacccaaggtcaggagttcgagaccagcctggtcaacatggtgaaacatcatctctactaaaaatacaaaaaattagctgggcatggtggtgcctgcctgtaaacccagcttctcgggaggctga-gcaggaaaatagcttgaacccagaaggcagagaatgtgatgacctgagatcacaccattgccctcaagccagggcaatgacagcaaaattcggt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55121047 250 + 185818997 tgtaatcctagcactttgggaggccgaggcgggtggatcaccccaggtcaggagttcaagaccagcctggtcaacctggtgaaacaccatctctactaaaaacacaaaaaattagctgggcatggtggcgcatgcctgtaaacccagctactcgggaggccga-gcaggagaacagcttgaac-------gtagagaatgtgatgacctgagatcacatcattgccctcaagccggggcaatgagagcaaaactcggt i rheMac8.chr3 C 0 I 12 s macFas5.chr3 127713396 250 - 192294377 tgtaatcctagcactttgggaggccgaggcgggtggatcaccccaggtcaggagttcgagaccagcctggtcaacctggtgaaacaccatctctactaaaaacacaaaaaattagctgggcatggtggcgcatgcctgtaaacccagctactcgggaggccga-gcaggagaacagcttgaac-------gtagagaatgtgatgacctgagatcacatcattgccctcaagccagggcaatgagagcaaaactcggt i macFas5.chr3 C 0 I 3 s cerAty1.NW_012005081v1 58305 258 - 113584 tgtaatcccagcactttgggaggccaaggcaggtggatcacccaaggtcaggagttcgagaccatcctcgtcaacctggtgaaacaccatctctactaaaaatacaaaaaattagctaggcatggtggcgcatgcctgtaaacccagctactcaggaggctgaggcaggagaattgcttgaacctggaaggcagagaatgtggtgacttgagatcatgccatcacccttaagccagggcaatgagagcaaaattcagt i cerAty1.NW_012005081v1 C 0 I 3 s chlSab2.chr21 124174857 257 - 127223203 tgtaatcctagcacttagggaggccgaggcaggtggatcaccccaggtcaggagttcgagaccagcctggtcaacctggtgaaacaccatctctactaaaaatacaaaaaattagctgggcatggtggcgcatgcctgtaaacccagctactcgggaggccaa-gcaggagaacagcttgaacccagaaggcagagaatgtgatgacctgagatcacaccattgccctcaagccagggcaatgagagcaaaactcggt i chlSab2.chr21 I 15 I 3 s manLeu1.NW_012100344v1 68668 257 - 148006 tgtaatcctagcactttgggaggccgaggcgggtggatcaccccaggtcaggagttcgagaccagcctggtcaacctggtgaaacaccatctctactaaaaatacaaaaaattagctgggcatggtggtgcacgcctgtaaacccagctactcgggaggccga-gcaggagaacagcttgaacccggaacgcagagaatgtgatgacctgagatcacatcattgccctcaagccagggcaatgagagcaaaactcggc i manLeu1.NW_012100344v1 C 0 I 3 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=2782.000000 s hg38.chr3_KI270784v1_alt 45052 26 + 184404 Aaaaacaaaacaaaacaaaacaaaac---------- s panTro5.chr1 222328785 16 + 228573443 ----------caaaacaaaacaaaac---------- i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 35413 21 - 1329735 Aaaaa-----caaaacaaaacaaaac---------- i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46815743 18 - 99891981 ct--------caaaaaaaaaaaaaaa---------- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127713649 15 - 192294377 ----------aaaagaaaaaaaaaa----------- i macFas5.chr3 I 3 C 0 s cerAty1.NW_012005081v1 58566 26 - 113584 ----------aaaaacaaaacaaaacaaaaccaaaa i cerAty1.NW_012005081v1 I 3 C 0 s chlSab2.chr21 124175117 9 - 127223203 ----------aaaag-aaaa---------------- i chlSab2.chr21 I 3 C 0 s manLeu1.NW_012100344v1 68928 10 - 148006 ----------aaaagaaaaa---------------- i manLeu1.NW_012100344v1 I 3 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e rheMac8.chr3 55121297 12 + 185818997 I e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=553048.000000 s hg38.chr3_KI270784v1_alt 45078 230 + 184404 aaaacCACCATAAAATAACTCAGACTTAATTAAATACAACCCTAGTGGTGAATGACT-----------------AAAGATGGATTACTCATAACAGAGATTGAACA-GTCCAATA-AGAATCCAGGAATCTTACCTTTTAATAACAAAA---AAATCCTTTCCTTCTAAAGTAACATCCTCTCAAGGCCAGGA--ATTCCAT-TAGTAG-AAAGCC-TTCCTAAA---AAACAAAATTCCTggc--caggcatgggttcacg s panTro5.chr1 222328801 228 + 228573443 aaaaCCACCATAAAATAACTCAGACTTAATTAAATACAACCCTAGTGGTGAATGACT-----------------AAAGATGGATTACTCATAACAGAGAT--AACA-GTCCAATA-AGAATCCAGGAATCTTACCTTTTAATAACAAAA---AAATCCTTTCCTTCGAAAGTAACAACCTCTCAAGGCCAGGA--ATTCCAG-TAGTAG-AAAGCC-TTCCTAAA---AAACAAAATTCCTggc--caggcatgggttcacg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 35434 228 - 1329735 aaaacCACCATAAAATAACTCAGACTTAATTAAATACAACCCTAGTGGTGAATGACT-----------------AAAGATGGATTACTCATAACAGAGAT--AACA-GTCCAATA-AGAATCCAGGAATCTTACCTTTTAATAACAAAA---AAATCCTTTCCTTCGAAAGTAACATCCTCTCAAGGCCAGGA--ATTCCAT-TAGTAG-AAAGCC-TTCCTAAA---AAACAAAATTCCTggc--caggcatgggttcacg i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46815761 244 - 99891981 aaa---aacataaaataaCTCAGATTTCATTAAATACAACCCTAGTGGCGAATGACTATTGGTCAACAATAAAAAAAGATGGATTACTCAGAACAGAGATT-AAGA-GTCCAATA-AGAATCCAAGAATCTTACCTTTAAATAACAAAAT--AAATCCTTTCCTTGGAAAGTAATATCCTCTGAAGGCCAGGA--ATTCCAT-TAGTAG-ACAACC-TTCTTAAA---AAAAAAAATTCCTggc--caggcatgggttcatg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55121309 241 + 185818997 aaaaaaGCCATAAAATAACTCAGATTTCATTAAATACAACCCTAGTGGTGAATGACTACTGGTCAACAAT-AA-AAAGATGGATTACTCAGAACAGAGATT-AAGA-GTCCAGTA-AGAATCCAGGAATCTTACCCTTAAATAATGAAGG--AAATTCTTTCCTTGGAAAGTAATATCCTCTC-AGGCCAGGA--ACT-CAT-TAGTAG-ACAGCC--TTTTAAA---AAA-AACATTTCTggc--cgggcatgggttcacg i rheMac8.chr3 I 12 C 0 s macFas5.chr3 127713664 238 - 192294377 ------GCCATAAAATAACTCAGATTTCATTAAATACAACCCTAGTGGTGAATGACTACTGGTCAACAATAAA-AAAGATGGATTACTCAGAACAGAGATT-AAGA-GTCCAGTA-AGAATCCAGGAATCTTACCCTTAAATAATGAAGG--AAATTCTTTCCTTGGAAAGTAATATCCTCTC-AGGCCAGGA--ACTCCAT-TAGTAG-ACAGCC-TTTTTAAA---AAA-AACATTTCTggc--cgggcatgggttcacg i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 58592 247 - 113584 ----aaaaCATAAAATAACTCAGACTTAATTAAATACAACCCTAGTGGT--ATGACTATTGGTCAACAATAAA-AAAGATGGATTACTCAGAACAGAGATA-CAGACGTCCTGTACAGAATCCCAAGATCTTA-CCTTCATTAACGAAAGACAAATCCTTTCCTT-AAAAGTAATA--CCTCA-AGGCCAGGAATACTCCATCTAGTAGAACAGCCCCTCTTAAAAACAAA-GACCTTTCTGGCTTCAGGCAtggg-tcacg i cerAty1.NW_012005081v1 C 0 I 25 s chlSab2.chr21 124175126 244 - 127223203 aaaaaaGCCATAAAATAACTCAGATTTCATTAAATACAACCCTAGTGGTGAATGACTACTGGTCAACAATAAA-AAAGATGGATTACTCAGAACAGAGATT-AAGA-GTCCAGTA-AGAATCCAGGAATCTTACCCTTAAATAATGAAAG--AAATCCTTTCCTTGGAAAGTAATATCCTCTC-AGGCCAGGA--ACTTCAT-TAGTAG-ACAGCC-TTCTTAAA---AAA-AACATTTCTggt--cgggcatgggttcacg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 68938 244 - 148006 aaaaaaGCCATAAAATAACTCAGATTTCATTAAATACGACCCTAGTGGTGAATGACTACTGGTCAACAATAAA-AAAGATGGATTACTCAGAACAGAGATT-AAGA-GTCCAGTA-AGAATCCAGGAATCTTACCCTTAAATAATGAAGG--ACATTCTTTCCTTGGAAAGTAATATCCTCTC-AGGCCAGGA--ACTCCAT-TAGTAG-ACAGCC-TTTTTAAA---AAA-AACATTTCTggc--cgggcatgggtttacg i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=76920.000000 s hg38.chr3_KI270784v1_alt 45308 58 + 184404 tctgtaatctcagcactctgggaggccgaggcgggaagatcacttgatatcaggagtc s panTro5.chr1 222329029 58 + 228573443 tctgtaatctcagcactctgggaggccgaggcggaaagatcacttgatgtcaggagtc i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 35662 58 - 1329735 tctgtaatctcagcactctggaaggccgaggcgggaagatcacttgatgtcaggagtc i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46816005 27 - 99891981 cttgtaatcccagcactttgggaggc-------------------------------t i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55121550 48 + 185818997 cctctaatcccagcactttggagggctgaggcaggaagatcacctgag---------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127713902 48 - 192294377 cctctaatcccagcactttggagggctgaggcaggaagatcacctgag---------- i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124175370 48 - 127223203 cctctaatcccagcactttgggaggctgaggcaggaagatcacctgag---------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 69182 48 - 148006 cctctaatcccagcactttgggaggctgaggcaggaagatcacctgag---------- i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e cerAty1.NW_012005081v1 58839 25 - 113584 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=4877.000000 s hg38.chr3_KI270784v1_alt 45366 8 + 184404 gaggcggg s panTro5.chr1 222329087 8 + 228573443 gaggcggg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 35720 8 - 1329735 gaggcggg i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46816032 8 - 99891981 gaggcagg i nomLeu3.chr17 C 0 C 0 s cerAty1.NW_012005081v1 58864 6 - 113584 gaggc--g i cerAty1.NW_012005081v1 I 25 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e saiBol1.JH378167 176352 10873 + 13147851 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e rheMac8.chr3 55121598 0 + 185818997 C e manLeu1.NW_012100344v1 69230 0 - 148006 C e chlSab2.chr21 124175418 0 - 127223203 C e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e macFas5.chr3 127713950 0 - 192294377 C e panPan2.chr7 56735359 33229 + 162613886 I a score=3853.000000 s hg38.chr3_KI270784v1_alt 45374 5 + 184404 aagat s panTro5.chr1 222329095 5 + 228573443 aagat i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 35728 5 - 1329735 aagat i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46816040 5 - 99891981 aggat i nomLeu3.chr17 C 0 C 0 s cerAty1.NW_012005081v1 58870 5 - 113584 aggaa i cerAty1.NW_012005081v1 C 0 C 0 s saiBol1.JH378167 187225 5 + 13147851 AATat i saiBol1.JH378167 I 10873 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e calJac3.chr2 1447413 14456 + 204313951 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e rheMac8.chr3 55121598 0 + 185818997 C e manLeu1.NW_012100344v1 69230 0 - 148006 C e chlSab2.chr21 124175418 0 - 127223203 C e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e macFas5.chr3 127713950 0 - 192294377 C e panPan2.chr7 56735359 33229 + 162613886 I a score=750173.000000 s hg38.chr3_KI270784v1_alt 45379 233 + 184404 cacttgac-----gtca--ggagttcgagactggcccag-ccaacatggtgaaaccgcatctccactaaaaatacaaaaattagcctggtg-tggtggtgggca-cctgtaatcccagtgacttgggaggct-aaggcaggagaatttcttgaacccaggaggcagaggttgcagtgaccagcaaggttgcgccattgcaccccagcctgggcgataagagtgaaaactccatctc--------aaaaaaaa s panTro5.chr1 222329100 233 + 228573443 cacttgac-----gtca--ggagtttgagactggcccgg-ccaacatggtgaaaccccatctccactaaaaatacaaaaagtagcctggtg-tggtggtgggca-cctgtaattccagcgacttgggaggcc-aaggcaggagaatttcttgaacccaggaggcagaggctgcagtgaccagcaaggttgcgccattgcaccccagcctgggcgataagagtgaaaactccatctc--------aaaaaaaa i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 35733 233 - 1329735 cacttgac-----gtca--ggagttcgagactggcccgg-ccaacatggtgaaaccccatctccactaaaaatacaaaaattagcctggtg-tggtggtgggca-cctgtaatcccagcgacttgggaggct-aaggcaggagaatttcttgaacccaggaggcagaggttgcagtgaccagcaaggttgcgccattgcaccccagcctgggcgataagagtgaaaactccatctc--------aaaaaaaa i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46816045 231 - 99891981 cacctgag-----gtca--ggagttcgagactggcctgg-ccaacatggtgaaaccccatctccactaaaaatacaaaaattagcctgacg-tggtggtgggca-cctataatcccagcgacccaggagggt-aaggcaggagaatcacttgaacccaggaggcagaggttgcagtgagc--caaggtcgtgccattgcactccagcctgggtgacaagagtgaaaactctgtctc--------aaaaaaaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55121598 219 + 185818997 -------------gtca--ggagttcaagaccggccagg-ccaacatggcgaaaccccatctccactaaaaatacaaaaattagcctggcg-tggtgctgggca-cctgtaatcccagcaactcaggaggctaaaggcagaagaatcgcttgaacccaggaggcagaggttgcagtgagc--caaggtcgcgccattgcactccagcctgggtgacaagagtgaaaa--ctgtctc-----------aaaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127713950 218 - 192294377 -------------gtca--ggagttcaagaccggcctgg-ccaacatggcgaaaccccatctccactaaaaatacaaaaattagcctggca-tggtgctgggca-cctgtaatcccagcaactcgggaggctaaaggcagaagaatcgcttgaacccaggaggcagaggttgcagtgagc--caaggtcgcgccattgcactccagcctgggtgacaagagtgaaaa--ctgtctc------------aaaa i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 58875 236 - 113584 gatccaacctgaggtca--ggagttcaagaccggcctggcccaacatggcgaaaccccatctccactaaaaata-aaaaatt-gcctggcgatggtg--gggcaccctagtatccca-caacttgggag--ctaaggcaggagaatcgcttgaacccaggaggcaagagttgcagtgagc--caaggtggca-cattgcactcc-gcct--gcgacaagagtgaaac-tccatctcaaaaaaagaaaaaaaa i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124175418 220 - 127223203 -------------gtca--ggagttcaagaccggcctgg-ccaacatggcgaaaccccatctccactaaaaatacaaaaattagcctggcg-tggtgctgggca-cctgtaatcccagcaactcgggaggct-aaggcagaagaatcacttgaacccaggaggcagaggttgcagtgagc--caaggtcacgccattgcactccagcctgggcgacaagagtgaaaactctgtctg-----------aaaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 69230 219 - 148006 -------------gtca--ggagttcaagaccagcctgg-ccaacatggcgaaaccctatctccactaaaaatacaaaaattagcctggcg-tggtgctgggca-cctgtaatcccaacaactcggaaggct-aaggcagaagaattgcttgaacccaggaggcagaggttgcagtgagc--caaggtcacgccattgcactccagcctgggcgacaagaatgaaaactctgtct------------caaaa i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1461869 202 + 204313951 CACTTAAT-----ATCACCTAagttgaagaccagcctgg-ccaacacggaaaaatcccatctctactaataatatgaaaattaccctggca-tggtggcaggca-actgt-----------------------gaggcaggagaactgcttgaagccaggag---------acagtgagc--cagaatcacaccattccactctaacctgggcaacaagaatgaaaactccatctc--------aagaaaaa i calJac3.chr2 I 14456 C 0 s saiBol1.JH378167 187230 199 + 13147851 cacctaag-----gtca--ggagttcaagaccagcctgg-ccaacatggaaaaatcccatctctaccaataatacaaaaattagcctggca-tggtggcagaca-accgt-----------------------gaggcaggagaactgcttgcagccaggag---------acaatgagc--cagaatcacaccactgcactctaacct-ggcaacaagaatgaaaactccttctc--------aagaaaaa i saiBol1.JH378167 C 0 C 0 e aotNan1.NW_018487315v1 6195512 27399 - 15679484 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=660287.000000 s hg38.chr3_KI270784v1_alt 45612 149 + 184404 -------aaaaaaaaaaaaaaaTTCCTTTGGGAAGGCCTTCTACAT-AAAAATCTTCAACATGAGACTGGAAAAAAGGGTATGGGATCATCACCGGACCTTTGGCTTTTACAGCTCGAGCTATAAGAACAAAAAGAAAAAGGGATATCATTTAAACA s panTro5.chr1 222329333 142 + 228573443 -------aaaaaaaaa-------TCCTTTGGGAAGGCCTTCTACAT-AAAAATCTTCAACATGAGACTGGAAAAAAGGGTATAGGATCATCACCGGACCTTTGGCTTTTACAGCTCGAGCTATAAGAACAAAAAGAAAAAGGGATATCATTTAAACA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 35966 141 - 1329735 -------aaaaaaaaT-------TCCTTTGGGAAGGCCTTCTACAT-AAAAATCTTCAACATGAGACTGGAAAAAAGGGTATGGGATCATCACC-GACCTTTGGCTTTTACAGCTCGAGCTATAAGAACAAAAAGAAAAAGGGATATCATTTAAACA i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46816276 146 - 99891981 -------aaaaaaaaa---aaaTTCCTTTGGGAAGGCCTTCTACAT-AAAAATCTTCAACATGAGACTGGAAAAAAGGGTATGGGACCATCCTTGGACCTTTGGCTTTTACAGCTGGAGCTACAAGAACAAAAAGAAAAAGGGATATCATTTAACCA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55121817 142 + 185818997 -------aaaaaaaaT-------TCCTTTGGGAAGAACTTCTACAT-AAAAATCTCCAACATGAGATTGGAAAAAACGGTATGGGATCATCCCCGGACCTTTGGCTTTTACAGTTGGAGCTATAAGAACAAAAAGAAAAAAGGATGTCATTTAAACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127714168 142 - 192294377 -------aaaaaaaaT-------TCCTTTGGGAAGAACTTCTACAT-AAAAATCTCCAACATGAGATTGGAAAAAACGGTATGGGATCATCCCCGGACCTTTGGCTTTTACAGTTGGAGCTATAAGAACAAAAAGAAAAAAGGATGTCATTTAAACA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 59111 141 - 113584 -------aaaaaaaaT-------TTCCTTTGGAAG-GCTTCTACATAAAAAATCTTCAACCATGAACTGGAAAAAAGGGTATGGGATCATCACTGGACC-TTGGCTTTTACAGCTCGAACTATAAGGACAAAAAGAAAAAGGGATATCATTTAAACA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124175638 142 - 127223203 -------aaaaaaaaT-------TCCTTTGGGAAGAACTTCTACAT-AAAAATCTCCAACATGAGACTGGAAAAAACGGTATGGGATCATCCCCGGACCTTTGGCTTTTACAGTTGGAGCTATAAGAACAAAAAGAAAAAAGGATGTCATTTAAACA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 69449 142 - 148006 -------aaaaaaaaT-------TCCTTTGGGAAGAACTTCCACAT-AAAAATCTCCAACATGAGACTGGAAAAAACGGTATGGGATCATCCCCGGATCTTTGGCTTTTACAGTTGGAGCTATAAGAACAAAAAGAAAAAAGGATGTCATTTAAACA i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1462071 141 + 204313951 ------gaaaacaaaT-------TCCTTTGGGAAGTCCTTCTACAT-TCACATCT-CAACATGAGACTGGACAAAAGGGTATGGGATCATCACCAGACCTTTGGCTTTTACAGCTTGACCTATAAGGAC-AAAAGAAAAAGGGATACCATTTAAACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 187429 138 + 13147851 ------gaaaaC---T-------TCCTTTGGGAAGGCCTTCTACAT-TCACATCT-CAACATGAGACTGGACAAAAGGGTATGGGATTATCACCAGACCTTTGGCTTTTACAGCCTGACCTATAAGGAC-AAAAGAAAACAAGATATCATTTAAACA i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6222911 147 - 15679484 aaaaagaaaaaaaaaT-------TCCTTTGGGAAGCCCTTTTACAT-TCACATCT-CAACATGAGACTGGACAAAAGGGTATGGGATCATCACCAGACCTTTGGCTTTTACAGCTTGACCTATAAGGAC-AAAAGATAAAGGGATATCATTTAAACA i aotNan1.NW_018487315v1 I 27399 I 367 e colAng1.NW_012116633v1 775473 37458 + 1536524 I e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=143960.000000 s hg38.chr3_KI270784v1_alt 45761 38 + 184404 CGGTATGTAGAAAAGAATAATTATTGAATCTGTACTGG s panTro5.chr1 222329475 38 + 228573443 CAGTATGCAGAAAAGAATAATTATTGAATCTGTACTGG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 36107 38 - 1329735 CAGTATGTAGAAAAGAAtaattattgaatctgtactgg i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46816422 38 - 99891981 CAATATATAGAAAAGAATAATTATTGAATCTGTATTGG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55121959 38 + 185818997 CAATATGTAGAAAAGCATAATTATTGAATCTGTATTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127714310 38 - 192294377 CAATATGTAGAAAAGCATAATTATTGAATCTGTATTGG i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 59252 38 - 113584 CAATATATAGAAAAGAATAGTTACTGAATCTGTATTGG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124175780 38 - 127223203 CAATATGTAGAAAAGCACAATTATTGAATCTGTATTGG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 69591 38 - 148006 CAATATGTACAAAAGCATAATTATTGAATCTGTATTGG i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1462212 35 + 204313951 CAATTTGTAGGTAAGGATA---ATTGAATCTGTATTGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 187567 35 + 13147851 CAATTTGTAGGTAAGAATA---ATTGAATCTGTATTGC i saiBol1.JH378167 C 0 I 313 e aotNan1.NW_018487315v1 6223058 367 - 15679484 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=40161.000000 s hg38.chr3_KI270784v1_alt 45799 7 + 184404 TCTTTAA s panTro5.chr1 222329513 7 + 228573443 TGTTTAA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 36145 7 - 1329735 tctttaa i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46816460 7 - 99891981 TCTTTAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55121997 7 + 185818997 TCTTTAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127714348 7 - 192294377 TCTTTAA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 59290 7 - 113584 TCTTTAA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124175818 7 - 127223203 TCTTTAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 69629 7 - 148006 TCTTTAA i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1462247 7 + 204313951 TCTTTAA i calJac3.chr2 C 0 I 1436 s saiBol1.JH378167 187915 7 + 13147851 TCTTTAA i saiBol1.JH378167 I 313 C 0 s aotNan1.NW_018487315v1 6223425 7 - 15679484 TCTTTAA i aotNan1.NW_018487315v1 I 367 C 0 e colAng1.NW_012116633v1 775473 37458 + 1536524 I e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=692467.000000 s hg38.chr3_KI270784v1_alt 45806 161 + 184404 CTTTTACACTTTGATCTTTAATTCTGTTATTGTGATTGAGTCCAAAGAAAAACAGTATGAGTAAAATAAAAAGAACACCAAAAATGCTAATATTCTGTTTACCGAAGTCTGTAGTGAAATATCCCATTAAATccaagtgcagtga--cacacccataatccca s panTro5.chr1 222329520 160 + 228573443 CTTTTACACTTTGATCTTTAATTCTGTTATTGTGATTGAGTCCAAAGAAAAATAGTATGAGTAAAATAAAAAGAACACCAAAAATGCTAATATTCTGTTTACCAAAGTCTGTAGTGAAATATCCCATTAAATccaagtgcagtga--cacacccataatccc- i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 36152 161 - 1329735 cttttacactttgatctttaattctgttattGTGATTGAGTCCAAAGAAAAATAGTATGAGTAAAATAAAAAGAACACCAAAAATGCTAATATTCTGTTTACCAAAGTCTGTAGTGAAATATCCCATTAAATccaagtgcagtga--cacacccataatccca i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46816467 161 - 99891981 CTTTTACACTTTGATCTTTAAT--TGTTATTGTAACTGAGTCCAAAGAAAAATGGTATGCGTGAAATAAAAAGAACACCAAAAATGCTAATATTCTGTTTATCAAAGTCTGTAGTGAAATATCCCATTAAATccaagtgcagtgactcacacccataatccca i nomLeu3.chr17 C 0 I 39 s rheMac8.chr3 55122004 162 + 185818997 CTTTTATACTTTGATCTTTAATTCTGTTCTTGTTACTGAGTCCAAAGAAAAATAGTATGAGTAAAATAAAAAGAACACCATAAATGCTAATATTCTGTTTATCAAAGTCTGCAGTGAAATATCCCATTAAATccaagtgcagtgactcacacccataatccc- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127714355 162 - 192294377 CTTTTATACTTTGATCTTTAATTCTGTTCTTGTTACTGAGTCCAAAGAAAAATAGTATGAGTAAAATAAAAAGAACACCATAAATGCTAATATTCTGTTTATCAAAGTCTGCAGTGAAATATCCCATTAAATccaagtgcagtgactcacacccataatccc- i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 59297 162 - 113584 CTTTTACATTTTGATCTTTAATTCTGTTATTGTAATTGAGTCCAAAGAAAAATAGTATGAGTAAAACAAAAAGAACACCAAAAATGCTAATATTCTGTTTATCAAAGTCTGTAGTGAAATATCCCATTAAATccaagtgcagtgactcacacccataatccc- i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124175825 162 - 127223203 CTTTTATACTTTGATCTTTAATTCTGTTCTTGTTACTGAGTCCAAAGAAAAATAGTATGAGTAAAATAAAAAGAACACCATAAATGCTAATATTCTGTTTATCAAAGTCTGCAGTGAAATATCCCATTAAATccaagtgcagagactcacacccataatccc- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 69636 162 - 148006 CTTTTATACTTTGATCTTTAATTCTGTTCTTGTTACTGAGTCCAAAGAAAAATAGTATGAGTAAAATAAAAAGAACACCATAAATGCTAATATTCTGTTTATCAAAGTCTGCAGTGAAACATCCCATTAAATccaagtgcagtgactcacacccataatccc- i manLeu1.NW_012100344v1 C 0 C 0 s saiBol1.JH378167 187922 159 + 13147851 CTTTTGTAATTTGATCTTTACTTCTATGATTGTAATTGAGTCCAAAGAAAAATAGTATGAGTAAAAT---AAGAACACCCCAAATGGTAATATTCTGTTTATCAATGTCTGCTGTAAAATATCCCATTACAGGCAAgtgcagtgtctcacacctataatctc- i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6223432 159 - 15679484 CTTTTGTAATTTGATCTTTACTTCTATGATTGTAAATGAGTCCAAAGAAAAATAGTATGAGTAAAAT---AAGAACACCAAAAATGCTAATATTCTGTTTATCAAAGTCTGCTGTAAAATATCCCGTTACAgccaagtgcagtgtctcacacctataatctc- i aotNan1.NW_018487315v1 C 0 C 0 e calJac3.chr2 1462254 1436 + 204313951 I e colAng1.NW_012116633v1 775473 37458 + 1536524 I e macNem1.NW_012013022v1 8964994 57134 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=761774.000000 s hg38.chr3_KI270784v1_alt 45967 138 + 184404 agcactttgggaggctgaggcgggtgaatctcctgaagtcaggagttcaaggccagcctggccaacatggtgaaaccccaactctactacaaatacaaaaattaggcaggcgtggtggcagaggcct-gtaatcccagc s panTro5.chr1 222329680 138 + 228573443 agcactttgggaggctgaggcgggtgaatctcctgaagtcaggagttcaaggccagcctggccaacatggtgaaaccccaactctactacaaatacaaaaattaggcaggcgtggtggcagaggcct-gtaatcccagc i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 36313 138 - 1329735 agcactttgggaggctgaggcgggtgaatctcctgaagtcaggagttcaaggccagcctggccaacatggtgaaaccccaactctactacaaatacaaaaattaggcaggcgtggtggcagaggcct-gtaatcccagc i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46816667 98 - 99891981 agcactttgggatgctgaggcaggtgaatctcctgaggtcaggagttcgaggccagcctggtcaacatggt----------------------------------------gtgatggcaggggcct-ataatcccagc i nomLeu3.chr17 I 39 C 0 s rheMac8.chr3 55122166 138 + 185818997 agaactttgggaggctgaggcgggtgaatctcctgaggtcaggtgtccaaggtcagcctggtcaacatggtgaaaccccaactctactacaaatacaaaaattaggcaggcgtggtggcaggggtct-ataatcccagc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127714517 138 - 192294377 agaactttgggaggctgaggcgggtgaatctcctgaggtcaggtgtccaaggtcagcctggtcaacatggtgaaaccccaactctactacaaatacaaaaattaggcaggcgtggtggcaggggtct-ataatcccagc i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9022128 138 - 10413719 agcactttggaaggctgaggtgggcagatcacctgaggttgggagttcgagaccagcctggccaacatggtgacaccgcagctctaatacaaatataaaaattaggcgggtgtgatggcaggtgcct-gtaatcccagc i macNem1.NW_012013022v1 I 57134 C 0 s cerAty1.NW_012005081v1 59459 138 - 113584 agcactttgggaggctgaggcgggtgaatctcctgaggtcaggagttcgaggccagtctggccaaaatggtgaaacgccaactctacgacaaatacaaaaatgaggcagccgtggtggcaggggtct-gtaatcccagc i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124175987 138 - 127223203 agaactttgggaggctaaggcgggtgaatctcctgaagtcaggtgtccgaggtcagcctggtcaacatggtgaaaccccaactctactacaaatacaaaaattaggcaggcgtggtggcaggggtct-ataatcccagc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 69798 138 - 148006 agaactttgggaggctgaggcgggtgaatctcctgaggtcaggtgtccaaggtcagcctggtcaacatggtgaaaccccaactctactacaaatacaaaaattaggcaggcgtggtggcaggggtct-ataatcccagc i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 812931 138 + 1536524 agcagtttggaaggctgaggtgggcagatcacctgaggttgggagttcaagaccagcctggccaacatggtgacaccccaactctactacaaatataaaaattaggcgggcgtgatggcaggtgcct-gtaatcccagc i colAng1.NW_012116633v1 I 37458 C 0 s saiBol1.JH378167 188081 139 + 13147851 agcacttcgggaggccaacacaggtgaatcacctgaggtcaggagttcaagaccagcctcaccaacatggagaaatcctgactctactaaaaatacaaaaagtagccagtcatggtagcacatgcctggtaatcccagc i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6223591 139 - 15679484 agcactttgggaggccaacacaggtgaatcacctgaggtcaggagttcaagaccagcctgaccaacatggggaaatcccaactctactaaaaatacaaaaagtagctaggcatggtagcacatgcctggtaatcccagc i aotNan1.NW_018487315v1 C 0 I 11 e calJac3.chr2 1462254 1436 + 204313951 I e panPan2.chr7 56735359 33229 + 162613886 I a score=45430.000000 s hg38.chr3_KI270784v1_alt 46105 9 + 184404 tacttagga s panTro5.chr1 222329818 9 + 228573443 tacttagga i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 36451 9 - 1329735 tacttagga i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46816765 9 - 99891981 tacttagga i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55122304 9 + 185818997 tactcagga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127714655 9 - 192294377 tactcagga i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9022266 9 - 10413719 tacttggga i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 59597 9 - 113584 tacttagga i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124176125 9 - 127223203 tactcagga i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 69936 9 - 148006 tactcagga i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 813069 9 + 1536524 tacttggga i colAng1.NW_012116633v1 C 0 C 0 s saiBol1.JH378167 188220 9 + 13147851 aactcaaga i saiBol1.JH378167 C 0 I 2 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e panPan2.chr7 56735359 33229 + 162613886 I a score=3421995.000000 s hg38.chr3_KI270784v1_alt 46114 840 + 184404 ggctgaggcagg--------------------------------gagaattgcttgaacccaggaggt-gagcttgccatgagctgagatcataccactgcactccagcgtgggtgacagaacaaaacttcaacctccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaC--------AGCTAGC---------AGGTGACATTTGCTATAGGGAGTAGGGAGACTAGGGATATGATCTTGCTGCAATCTTTCCATTTTAGTAAATCTAAACAAGTGTGAATCCATTCTGTTTCGTCCCCACTCCACTCCAGAGCCAAAA----CAAGAAAATCAATTATATTTCTAGTTCTTTAAAAACATATCTAACTAAATCATCTAATTAAAAGATAATATGCATGGTTCCATACTCTAAAAGAAAA---CTTATGTCCTGCATATCATGGACATTTGATGAATGCTTATTCAGTTGACTGGTGTAGACTTCAATAATAACCTGTTCAATGCATTATACCAGATGAATCTTGCATCTCAAAAGTAGAACAAATATTGTTCTTTCAGTTTTGTCTACCCATAAATGCAATATTTAC------------------TAATAAAAAGAAAATGAGTTTATTGTTCTAGAGAGTATGAGAATTTTGACAACATGAATTCTCCTGTCCTAGGACATAATTAATACTTAGAGGCATACTATTTCATGTGGAAGCTACCATT-----AAATCAATGTTAAGTGTTA----ATTACCTCACATAATCTTCTAATCTGACTT--GACTGAAGACGTACCTGACAAAGTTGATTTATCAAGTTGTAAATCTTCACCTGTTGAATTCATAAGTTCATGTCTGAAAGGTGAGAATAAATACTTAATATTCATTAGGCAATATTCAGCAAAGTAATATCCACTAGTA s panTro5.chr1 222329827 832 + 228573443 ggctgaggcagg--------------------------------gagaattgcttgaacccaggaggt-gagcttgccatcagctgagatcataccactgcactccagcgtgggtgacagaacaaaacttcaacctcc--aaaaaaaaaaaaaaaaaaaaaaaaaaaaC--------AGCTAGC---------AAGTGACATTTGCTA-------TGGGGAGACTCGGGATATGATCTTGCTGCAATCCTTCCATTTTAGTAAGTCTAAAC-AGTGTGAATCCATTCTGTTTCGTCCCCACTCCACTCCAGAGCCAAAA----CAAGAAAATCAATTACATTTCTAGTTCTTTAAAAACATATCTAACGAAATCATCTAATTAAAAGATAATATGCATGGTTCCATACTCTAAAAGAAAA---CTTATGTCCTGCATATCATGGACATTTGATGAATGCTTATTCACTTGACTGGTGTAGACTTCAATAATAACCTGTTCAATGCATTATGCCAGATGAATCTCGCATCTCAAAAGTAGAACAAATATTGTTCTTTCAGTTTTGTCTACCCATAAATGCAATATTTAC------------------TAATAAAAAGAAAATGAGTTTATTGTTCTAGAGAGTATGAGAATTTTGACAACATGAATTCTCCTGTCCTAGGACATAATTAATACTTAGAGGCATACTATTTCATGTGGAAGCTACCATT-----AAATCAATGTTAAGTGTTA----ATTACCTCACATAATCTTCTAATCTGACTTAAGACTGAAGATGTACCTCACAAAGCTGATTTATCAAGTTGTAAACCTTCACCTGTTGAATTCATAAGTTCATGTCTGAAAGGTGAGAATAAATACTTAATATTCACTAGGCAATATTCAGCAAAGTAATATCCACTAGTA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 36460 822 - 1329735 ggctgaggcagg--------------------------------gagaattgcttgaacccaggaggt-gagcttgccatgagctgagatcataccactgcactccagcgtgggcgacagaacaaaacttcaacctcc------------aaaaaaaaaaaaaaaaaaC--------AGCTAGC---------AGGTGACATTTGCTA-------TGGGGAGACTAGGGATATGATCTTGCTGCAATCCTTCCATTTTAGTAAATCTAAAC-AGTGTGAATCCATTCTGTTTCGTCCCCACTCCACTCCAGAGCCAAAA----CAAGAAAATCAATTATATTTCTAGTTCTTTAAAAACATATCTAACTAAATCATCTAATTAAAAGATAATATGCATGGTTCCATACTCTAAAAGAAAA---CTTATGTCCTGCATATCATGGACATTTGATGAATGCTTATTCAGTTGACTGGTGTAGACTTCAATAATAACCTGTTCAATGCATTATGCCAGATGAATCTTGCATCTCAAAAGTAGAACAAATATTGTTCGTTCAGTTTTGTCTACCCATAAATGCAATATTTAC------------------TAATAAAAAGAAAATGAGTTTATTGTTCTAGAGAGTATGAGAATTTTGACAACATGAATTCTCCTGTCCTAGGACATAATTAATACTTAGAGGCATACTATTTCATGTGGAAGCTACCATT-----AAATCAATGTTAAGTGTTA----ATTACCTCACATAATCTTCTAATCTGACTTAAGACTGAAGACGTACCTCACAAAGCTGATTTATCAAGTTGTAAATCTTCACCTGTTGAATTCATAAGTTCATGTCTGAAAGGTGAGAATAAATACTTAATATTCACTAGGCAATATTCAGCAAAGTAATATCCACTAGTA i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46816774 858 - 99891981 ggctgaagcagggagaattgcttgaacccaggaggtgagcttgcgagaattgcttgaacccaggaggt-gagcttgccatgagctgagatcacaccaatgcactccagcgtgggcgacagaacaaaactccatcttac----------------caaaaaaaaaagaaC--------AGCTAGC---------AGGTGACATTTGCTA-------TGGGGAGACCAGGGATATGATCTTGTGACAATCCTTCCATTTTAGTAAATCTAAAC-AGTGTGATTCCATTCTGTTTCATCCCCACTCCACTCCAGAGCCAAAA----CAAGAAAATCAATTATGTTTCTGTTTCTTTAAAAACATATCTAACTAAATCATCTAATTAAAAGACAATATGCATGGCTCCATACTCTAAAAGAAAACTTCTTATGTCCTGTGTACCATGGACATTTGATGAATGCTTGTTCAGCTGACTGGTGTAGACTTCAATAATAACCTGTTCGATGCATTATGCCAGATAAATCTTGTATCTCAAAAGTAGGACAAATATTGTTCTTTCAGTTTTGTCTACCCA-AAATGCAATATTTACATGTATTT-ATAATGGGTTAATAAAAAGAAAATGAGTTTATTGTTCTAGAGAGTATGAGAA-TTTGAAAACATGAATTCTCCTGTCGTGGCACATAATTAATAATTAGAGGCAT-----------TGGAAGCTACCATTAAAAGAAATCAATGTTAAGCATTA----ATTACTTCACATAATCTTCTAACCTGACTTAAGACCGAAGACCTACCTCACGAAGCTGATTTATCAAGTTGTAAATCTTCACCTGCTGAATTCATAAGTTCATGTCTAAAAGGTGAG----AATACTTAATATTCACTAGGCAATATTCAGCAAAGTAATATCCACTAGTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55122313 835 + 185818997 ggctaaggcagg--------------------------------gagaactgcttgaacccaggaggt-gagcttgccatgagctgagatcacaccactgcacttcagcatgggcgacagaacaaaactccgtcttaa------------aaaaaaaaaaaaaa-------------TGCTAGC---------ACGTGACATTTGCTA-------TGGGGAGACTAGGGATATGATCTTGCTGCAGTCCTTCCATTTTAGTAATTGCAAAC-AGTGTGATTCCATTCTGTTTCATCCCCACTCCACTCCAGAGCCAAAA----TAAGAAAATCAATTATATTTCTATTTCTTTAAAAACATATCTAACTAAATCATCTAATTAAAAGATAATATGCACGGCTCCATACTAGTAAAAACAACTTCTTATGTCCTGAGTATCATGGACATTTGATGAATGCTTGTTCAGTTGACTGGTGTAGACTTCAATAATAACCTGTTCGATGCATTATGCCACATTAATCTTGCATCTCAAAAGTAGGACAAATACTGTTCTTTCAGTTTTGTCTAGCCA-AAATGTAGTATTTACACGTATTTAAAAATGGGTTAATAAAAAGAAAATGAGTT---TGTTCTAGAGAGTATAAGAATTTTGAAAACGTGAATTCTCCTGTCCTGGCACATAGTTAATACTTAGAGGCATATTATTTCATGTAGAAGCTACCATTAAAAGAAATTAATGTTAAAC--------ATTACTTCACATAATCTTCTAACCTGACTTAAGACTGAAGACCTACCTCACGAAGCTGATTTATCAAGTTGTAAATCTTCACCTGTTGAATTCATAAGTTCATCTCTGAAAGGTAAGAATAAATACTTAATATTCAATAGGCAATATTCAGCAAAGTAATATCCACCAGTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127714664 837 - 192294377 ggctaaggcagg--------------------------------gagaactgcttgaacccaggaggt-gagcttgccatgagctgagatcataccactgcacttcagcatgggcgacagaacaaaactccatcttaa------------aaaaaaaaaaaaaaaa-----------TGCTAGC---------ATGTGACATTTGCTA-------TGGGGAGACTAGGGATATGATCTTGCTGCAGTCCTTCCATTTTAGTAATTGCAAAC-AGTGTGATTCCATTCTGTTTCATCCCCACTCCACTCCAGAGCCAAAA----TAAGAAAATCAATTATATTTCTATTTCTTTAAAAACATATCTAACTAAATCATCTAATTAAAAGATAATATGCACGGCTCCATACTAGTAAAAACAACTTCTTATGTCCTGAGTATCATGGACATTTGATGAATGCTTGTTCAGTTGACTGGTGTAGACTTCAATAATAACCTGTTCGATGCATTATGCCACATTAATCTTGCATCTCAAAAGTAGGACAAATACTGTTCTTTCAGTTTTGTCTAGCCA-AAATGTAGTATTTACACGTATTTAAAAATGGGTTAATAAAAAGAAAATGAGTT---TGTTCTAGAGAGTATGAGAATTTTGAAAACGTGAATTCTCCTGTCCTGGCACATAGTTAATACTTAGAGGCATATTATTTCATGTAGAAGCTACCATTAAAAGAAATTAATGTTAAAC--------ATTACTTCACATAATCTTCTAACCTGACTTAAGACTGAAGACCTACCTCACGAAGCTGATTTATCAAGTTGTAAATCTTCACCTGTTGAATTCATAAGTTCATCTCTGAAAGGTAAGAATAAATACTTAATATTCACTAGGCAATATTCAGCAAAGTAATATCCACCAGTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9022275 854 - 10413719 gcctgaggcagg--------------------------------aagaattgcttgaacctgggaggtggagggtgcaatgagttgagatcacaccactgcactccagcgtgggcgacagagcaaaactccatctcaa------------aaaaaaaaaaaaaaaaaaaaaaaGAACAGCTAGC---------AGGTGCCATTTGGTA-------TGGGGAGACTACGCATATAATCTTGCAGCAATCCTTCCATTTTAGTAAATCTAAAC-AGTGTGATTCCATTCTGTTTTGTCCCCACTCTACTCCAGAGCCAAAACAAGTAAGAAAATCAGTTATATTTCTGTTTCTTTCAAAACACATCTAAC----------AATTAAGAGACGATATGCATGGCTCCATATTCTAAAAGGAAACCTCTTATATCCTGGGTATCATGGACATTTGATGAATGTTTGCTCAGTTGTTTGGTGCAAGCTTCAATAATAACCTGTTCAATGCATTATGCCAGATAAATCTTGCATCTCAAAAGTAGGAAAAATATTGTTCTTTTAGTTCTGTCTACCCATAAATGCAACATTTACATGTATTT-ATAATGGGTTAATAAAAATAAAGTGAATTTACTGTTCTAGAGAGTATTAGAATTTTGACAACATGAATTCTCCTGTCCTGGCATGTAATTAAAAGTTAGAGGAATATTATTTCATGTGGAAGATACCATTAAAAAAAATCAATGTTAAGCATTAAATAATTATTTTACATAATCTTCTAATCTGACTTAAGACTGAAGACCTACCTCCTGAAGCTGGTTTATCAAGTTGTAAATCTTCATGTGTCGAACTCACAAGTTCATGTCTGCAAGGTGAGAATAAATACTTAATATTCACTAGGCAATATTCAGCAAAGTAATATCCATTAGTA i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 59606 854 - 113584 ggctgaggcagg--------------------------------gagaattgcttgaacccaggaggt-aaggttgccatgagctgagatcgtaccactgcactccagcatgggtgatagaacaaaactccatcttaa------------aaaacaaaaaacaaaaaaC--------AGCTAGCAGGTGACATAGGTGACATTTGCTA-------TGGGGAGACTAGGGATATGATCTTGCTGCAATCTTTCCATTTTATTAAATCTAAAC-AGTGTGATTCCATTCTGTTTTATCCCCACTCCACTCCAGAGCCAAAA----CAAGAAAATCAAT--TATTTCTATTTCTTTAAAAACATATCTAACTAAGTCATCTAATTAAAATATAATATGCACGGCTCCATACTCTAAAAGAAAACTTGTTATGTCCTGCATATCATGGACATTTGATGAATGCTTGTTCAGTGGACTGGTGTAGACTTCAATAATAACCTGTTCAATGCATTATGCCAGATAAATCTGGCATGTCAAAAGTAGGACAAATATTGTTCTTTCAGTTTTGTCTACCTATAAGTGCAATATTTACATGTATTT-ATAACGGGTTAATAAAAAGAAAATGAGTTTCTTATTCTAAAGAGTATGAGAATTTTGACAACATGAATTCTCCTGTCCGAGGACATAATTAATACTCAGAGGCATATTACGTCATGTGGAAGCCACCATGAAAAGAAATCAATGTTACGCGTTA----ATTACTTCACATAATCTTCTAATCTGACTTAAGACTGAAAACGTACCTCACGAAGCTGATTTATCAAGTTGTAAATCTTCACCTGTTGAATTCATAAGTTCATGTCTGAAAGGTGACAATAAATACTTAATATTCACTAGTCAATATTCAGTAAAGTAATATCCACCAGTA i cerAty1.NW_012005081v1 C 0 I 3049 s chlSab2.chr21 124176134 829 - 127223203 ggctaaggcagg--------------------------------gagaactgcttgaacacaggaggt-gagcttgccatgagctgagatcataccactgcactccagcatgggcgacagaacaaaactccatcttaa------------aaaaaaaaaaaaa--------------aGCTAGC---------ACGTGACATTTGCTA-------TGGGGAGACTAGGGATATGATCTTGCTGCAATCCTTCCATTTTAGTAATTGCAAAC-AGTGTGATTCCAT--TGTTTCATCCCCACTCCACTCCAGAGCCAAAA----TAAGAAAATCAATTATATTTCTATTTCTTTAAAAACATATCTAACTAAATCATCTAATTAAAAGATAATATGCATGGCTCCATACTAGTAAAAAAAACTTCTTATGTCCTGAGTATCATGGACATTTGATGAATGCTTGTTCAGTTGACTGGTGTAGACTTCAATAATAACCTGTTCGATGCATTATGCCACATTAATCTTGCATCTCAAAAGTAGGACAAATACTGTTCTTTCAGTTTTGTCTAGCCA-AAATGTAGTATTTACACGTATTTAAAAATGGGTTAATAAAAAGAAAATGAGTT---TGTTCTAGAGAGTATGAGAATTTTGAAAACATGAATTCTCCTGTCCTGGCACATAATTAATACTTAGAGGCATATTATTTCATGTGGAAGCTACCATTAAAAGAAATTAATGTTAAAC--------ATTACTTCACATAATCTTCTAACCTGACTTAAGACTAAAGACCTACCTCATGAAGCTGATTTATCAAGTTGTAAATCTTCACCTGTTGAATTCATAAGTTCATCTCTGAAAGGTAAGAATAAATACTTAATATTCACTAAGCAATATTCAGCAAAGTAATATCC---AGTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 69945 833 - 148006 ggctaaggcagg--------------------------------gagaactgcttgaacccaggaggt-gagcttgccatgagctgagatcacaccactgcacttcagcatgggcgacagaacaaaactccatcttaa------------aaaaaaaaaaaaa--------------aGCTAGC---------ACGTGACATTTGCTA-------TGGGGAGACTAGGGATATGATCTTGCTGCAATCCTTCCATTTTAGTAATTGCAAAC-AGTGTGATTCCATTCTGTTTCATCCCCACTCCACTCCAGAGCCAAAA----TAAGAAAATCAATTATATTTCTATTTCTTTAAAAACATATCTAACTAAATCATCTAATTAAAAGATAATATGCACGGCTCCATACTAGTAAAAAAAACTTCTTATGTCCTGAGTATCATGGACATTTGATGAATGCTTGTTTAGTTGACTGGTGTAGACTTCAATAATAACCTGTTCGATGCATTATGCCACATTAATCTTGCATCTCAAAAGTAGGACAAATACTGTTCTTTCAGTTTTGTCTAGCCA-AAATGTAGTATTTTCACGTATTTAAAAATGGGTTAATAAAAAGAAAATGAGTT---TGTTCTAGAGAGTATGAGAATTTTGAAAACGTGAATTCTCCTGTCCTGGCACATAATTAATACTTAGAGGCATATTATTTCATGTGGAAGCTACCATTAAAAGAAATTAATGTTAAAC--------ATTACTTCACATAATCCTCTAACCTGACTTAAGACTGAAGACCTACCTCACGAAGCTGATTTATCAAGTTGTAAATCTTCACCTGTTGAATTCATAAGTTCATCTCTGAAAGGTAA-AATAAATACTTAATATTCACTAGGCAATATTCAGCAAAGTAATATCCACTAGTA i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 813078 843 + 1536524 gcctgaggcagg--------------------------------aagaattgcttgaacctgggaggtggagggtgcaacgagttgagatcacaccacttcactccagcgtgggcgacagagcaaaactccatctcac------------aaaaaaaaaaaaaaaaaaaaagaaC--AGCTAGC---------AGGTGCCATTTGGTA-------TGGGGAGACTATGCATATAATCTTGCAGCAATCCTTCCACACT---------AAAC-AGTGTGATTCCATTCTGTTTTGTCCCCACTCTACTCCAGAGCCAAAACAAGTAAGAAAATCAGTTATATTTCTATTTCTTTCAAAACACATCTAAT----------AATTAAGAGATGATATGCATGGCTCTATATTCTAAAAGGAAACCTCTTATATCCTGGGTATCATGGACATTTGATGAATGTTTGCTCAGTTGTTTGGTGCAAGCTTCAGTAATAACCTGCTCAATGCATTATGCCAGATACATCTTGCATCTCAAAAGTAGGAAAAATACTGTTCTTTTAGTTCTGTCTATCCATAAATGCAACATTTACATGTATTT-ATAATGGGTTAATAAAAATAAAATGAGTTTACTGTTCTAGAGAGTATTAGAATTTTGACAACATGAATTCTCCTGTCCTGGCATATAATTAAAAGTTAGAGGAATATTATTTCATGTGGAAGATACCATTAAAAAAAATCAATGTTAAGCATTAAATAATTATTTTACATAATCTTCTAATCTGACTTAAGACTGAAGACCTACCTCCTGAAGCTGGTTTATCAAGTTGTAAATCTTCATGTGTCGAACTCACAAGTTCATGTCTGCAAGGTGAGAATAAATACTTAATATTCACTAGGCAATATTCAGCAAAGTAATATCCATTAGTA i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e saiBol1.JH378167 188229 2 + 13147851 I e panPan2.chr7 56735359 33229 + 162613886 I a score=321619.000000 s hg38.chr3_KI270784v1_alt 46954 95 + 184404 CATATTTAATATTTCATCATGAACTGCGGGTGTGAAGAGAAAAGACAggctgggcacagtggctcacacctgtaatcccagcagtttgggaggcc s panTro5.chr1 222330659 95 + 228573443 CATATTTAATATTTCATCATGAACTGCGGGTGTGAAGAGAAAAGACAggctgggcacagtggctcacacctgtaatcccagcagtttgggaggcc i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 37282 95 - 1329735 CATATTTAATATTTCATCATGAACTGCGGGTGTGAAGAGAAAAGACAggctgggcacagtggctcacacctgtaatcccagcagtttgggaggcc i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46817632 95 - 99891981 CATATTTAGCATTTCATCACCAAGGGTGGGTGTGAAAAGAAAAGACAgactgggcacggtggctcacgcctgtaattccagcactttgagaggcc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55123148 95 + 185818997 TATATTTAACATTTCATCACCAAGGGTGGGTGTGAAAAGAAAAGACAgactgggcacagtggctcacgcctgtaatcccaacactttgggaggcc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127715501 95 - 192294377 TATATTTAACATTTCATCACCAAGGGTGGGTGTGAAAAGAAAAGACAgactgggcacagtggctcacgcctgtaatcccaacactttgggaggcc i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9023129 89 - 10413719 CATATTTAACATTTAATCACCAAGGGTGGCTTTGGAAAGAAAAGACAggctgggcacagtggctcacacctgtaatcccaacact------gact i macNem1.NW_012013022v1 C 0 C 0 s chlSab2.chr21 124176963 95 - 127223203 TATATTTAACATTTCATCACCAAGGGTGGGTATGAAAAGAAAAGACAgactgggcacagtggctcacgcctgtaatcccaacactttgggaggcc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 70778 95 - 148006 CATATTTAACATTTCATCACCAAGGGTGGGTGTGAAAAGAAAAGACAgactgggcacagtggctcacgcctgtaatcccaacactttgggaggcc i manLeu1.NW_012100344v1 C 0 I 3623 s colAng1.NW_012116633v1 813921 89 + 1536524 CATATTTAACATGTAATCACCAAGGGTGGCTTTGGAAAGAAAAGACAggctgggcacagtggctcacagctgtaatcccaacact------gact i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e cerAty1.NW_012005081v1 60460 3049 - 113584 I e saiBol1.JH378167 188229 2 + 13147851 I e panPan2.chr7 56735359 33229 + 162613886 I a score=20214.000000 s hg38.chr3_KI270784v1_alt 47049 6 + 184404 gaggca s panTro5.chr1 222330754 6 + 228573443 gaggca i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 37377 6 - 1329735 gaggca i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46817727 6 - 99891981 aaggca i nomLeu3.chr17 C 0 I 3560 s rheMac8.chr3 55123243 6 + 185818997 gaggta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127715596 6 - 192294377 aaggta i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9023218 6 - 10413719 gaggca i macNem1.NW_012013022v1 C 0 C 0 s chlSab2.chr21 124177058 6 - 127223203 aaggta i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 74496 6 - 148006 aaggca i manLeu1.NW_012100344v1 I 3623 C 0 s colAng1.NW_012116633v1 814010 6 + 1536524 gaggca i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e cerAty1.NW_012005081v1 60460 3049 - 113584 I e saiBol1.JH378167 188229 2 + 13147851 I e panPan2.chr7 56735359 33229 + 162613886 I a score=302652.000000 s hg38.chr3_KI270784v1_alt 47055 85 + 184404 ggcagatcatgaggtcaggagttcgagaccagcctggccaacatggtaaaaccccgtctgtactaaaagtacaataattagctgg s panTro5.chr1 222330760 85 + 228573443 ggcagatcatgaggtcaggagttcgagaccagcctggccaacatggtaaaaccccgtctgtactaaaagtacaataattagctgg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 37383 85 - 1329735 ggcagatcatgaggtcaggagttcgagaccagcctggccaacatggtaaaaccacgtctgtactaaaagtacaataattagctgg i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46821293 85 - 99891981 ggcagatcatgaggtcaggagttcgaggccagcctggccaacatggtgaaaccctgcctctactaaaaatacaaaaattagccag i nomLeu3.chr17 I 3560 C 0 s rheMac8.chr3 55123249 85 + 185818997 ggcagatcttgaggtcaggagttcaagaccagtctgaccaacatggtcaaaccccgtctctactaaaaatacaaaaattagccaa i rheMac8.chr3 C 0 I 3753 s macFas5.chr3 127715602 85 - 192294377 ggcagatcttgaggtcaggagttcaagaccagtctgaccaacatggtcaaaccccgtctctactaaaaatacaaaaattagccaa i macFas5.chr3 C 0 I 3752 s macNem1.NW_012013022v1 9023224 85 - 10413719 ggcagatcacaaggtcaggagttcgagaccagtctggccaacatggtgaaaccccatctctactaaaaatacaaatattagccag i macNem1.NW_012013022v1 C 0 C 0 s chlSab2.chr21 124177064 85 - 127223203 ggcagatcttgaggtcaggagttcaagaccagtctgaccaacatggtcaaaccccgtctctactaaaaatacaaaaattagccaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 74502 85 - 148006 ggcagatcatgaggtcaggagttcgaggccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaacattaaccat i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 814016 85 + 1536524 ggtagatcacaaggtcaggagttcgagaccagtctggccaacatggtgaaaccccatctctactaaaaaaacaaaaattagccag i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e cerAty1.NW_012005081v1 60460 3049 - 113584 I e saiBol1.JH378167 188229 2 + 13147851 I e panPan2.chr7 56735359 33229 + 162613886 I a score=203329.000000 s hg38.chr3_KI270784v1_alt 47140 55 + 184404 gcatggtggcaggcacctgtaatcccagctactcgggaggctgaggcaggagaat s panTro5.chr1 222330845 55 + 228573443 gcatggtggcaggcacctgtaatcccagctactcgggaggctgaggcaggagaac i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 37468 55 - 1329735 gcatggtggcaggcacctgtaatcccagctactcgggaggctgaggcaggagaat i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46821378 55 - 99891981 gcatggtggcaggcacctgtaatcccagctactcaggaggctgaggcaggagaat i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55127087 55 + 185818997 gcatggttgcaggcacctgtaatcccagctactcaggaggctgaggcaggagaat i rheMac8.chr3 I 3753 C 0 s macFas5.chr3 127719439 55 - 192294377 gcatggtggcaggcacctgtaatcccagctactcaggaggctgaggcaggagaat i macFas5.chr3 I 3752 C 0 s macNem1.NW_012013022v1 9023309 55 - 10413719 gcattgtggcagatgcttataatcccaggtactcaggaggctgagctaggagaat i macNem1.NW_012013022v1 C 0 I 2187 s chlSab2.chr21 124177149 55 - 127223203 gtgtggtggcagatgcctgtaatcctagatactcaggaggctgaggcaggagaat i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 74587 55 - 148006 gcatggtggcaggcacctgtaatcccagctactcaggaagctgaggcaggagaat i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 814101 55 + 1536524 gcattgtggcaggtgcttgtaatcccagctactcaggaggctaagctaggagaat i colAng1.NW_012116633v1 C 0 I 2173 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e cerAty1.NW_012005081v1 60460 3049 - 113584 I e saiBol1.JH378167 188229 2 + 13147851 I e panPan2.chr7 56735359 33229 + 162613886 I a score=71586.000000 s hg38.chr3_KI270784v1_alt 47195 29 + 184404 tgcctgaacccaggaggtggaggttgcag s panTro5.chr1 222330900 29 + 228573443 tgcctgaacccaggaggtggaggttgcag i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 37523 29 - 1329735 tgcctgaacccaggaggtggaggttgcag i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46821433 29 - 99891981 tgcctgaatccaggaggtggaggttgcag i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55127142 29 + 185818997 tgcctgaacccaggaggtggatgttgcag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127719494 29 - 192294377 tgcctgaacccaggaggtggatgttgcag i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124177204 29 - 127223203 tgcctgaacccaggaggcagagattgcag i chlSab2.chr21 C 0 I 1997 s manLeu1.NW_012100344v1 74642 29 - 148006 tgcctgaacccaggaggtggatgttgcag i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e cerAty1.NW_012005081v1 60460 3049 - 113584 I e saiBol1.JH378167 188229 2 + 13147851 I e colAng1.NW_012116633v1 814156 2173 + 1536524 I e macNem1.NW_012013022v1 9023364 2187 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=1332217.000000 s hg38.chr3_KI270784v1_alt 47224 766 + 184404 aaaccattatcacgccactgcattccagcctgggcaagagagcaagattctgtc------------tcCATCAATCAATCAATAAAAATATAAGGAGGAAGcatttactgtgtatttatatgtctggtattatgtgaagcactttactatcttatcaaatcttcgggacagatcttcagttctcatgaccacaaaagaggatactaaagctcagacaggagaagagacgtggccaGCCTGTGTCCCCAGGGCCTATGGTCTTACCACTAG--------GTTACAGTGTTTCCAGATATCACATGTTGTGAGATTTTTGCTTTAAAATGAACCAAAAAAAAACCAAAGGTGAAAAAGGCATAAGCTATTAAAAAGTGGGAGAAACACTAAGAGAACCTTAAGCATGTAACTAAAAATATTATGGAAATGTTATTGAATTCATTAGCAAATTTAGTGCTAGGTTTTCATTGAGGAGTAGGTTATATTACTCATGATGAAG--AAAAATGTTCATTTTAAGTATATTAACATAAATACCATCAATATTGTTTATCATGCTTAAATGTTCACTTAAAGCAATTCAGTTAAAATTCTGCATATCATACAATTTTATAGTTTGCTAGTAGGTTACAAGTAAATAGTCACCCAAATAAAA-----------ACATCA--TGTTTTCCAC-----------------------------TGGTTGTTGCTCTTTTTTAGGTGAGTATTTGATGTATACCAACAGAGAGAGGATAATAACAAATCGCTAATTTCTTTCATCACTATATAAAGGTGGCTTCAGGATAGAATAGTATCAGG s panTro5.chr1 222330929 766 + 228573443 aaaccatgatcacgccactgcattccagcctgggcaagagagcaagattctgtc------------tcaaTCAATCAATCAATAAAAATATAAGGAGGAAGcatttactgtgtatttatatgtctggtattatgtgaagcactttactatcttatcaaatcttcgggacagatcttcagttctcacgaccacaaaagaggatactaaagctcagacaggagaagagacgtggccaGCCTGTGTCCCCAGGGCCTATGGTCTTACCACTAG--------GTTACAGTGTTTCCAGATATCACATGTGGTGAGATTTTTGCTTTAAAATGAACC-AAAAAAAACCAAAGGCGAAAAAGGCATAAGCTATTAAAAAGTGGGAGAAACACTAAGAGAACCTTAAGCATGTAACTAAAAATATTATGGAAATGTTATTGAATTCATTAGCAAATTAAATGCTAGGTTTTCATTGAGGAGTAGGTTATATTACTCATGATGAAG--AAAAATGTTCATTTTAAGTATATTAACATAAATACCATCAATATTGTTTATCATGTTTAAATGTTCACTTAAAGCAATTCAGTTAAAATTCTGCATATCATACAATTTTATAGTTTGCTAGTAGGTTACAAGTAAATAGTCACCCAAATAAAA-----------ACATCATGTGTTTTCCAC-----------------------------TGGTTGTTGCTC-TTTTTAGGTGAGCATTTGATGTATACCAACAGAGAGAGGATAATAACAAATCACTAATTTCTTTCATCACTATATAAAGGTGGCTTCAGGATAGAATAGTGTAAGG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 37552 763 - 1329735 aaaccattatcacgccactgcattccagcctgggcaagagagcaagattctgtc------------tcaaTCAATCAATCAATAAAAATATAAGGAGGAAGcatttactgtgtatttatatgtctggtattatgtgaagcactttactatcttatcaaatcttcgggacagatcttcagttctcatgaccacaaaagaggatactaaagctcagacaggagaagagacgtggccaGCCTGTGTCCCCAGGGCCTATGGTCTTACCACTAG--------GTTACAGTGTTTCCAGATATCACATGTTGTGAG-TTTTTGCTTTAAAATGAACC-AAAAAAAACCAAAGGTGAAAAAGGCATAAGCTATTAAAAAGTGGGAGAAACACTAAGAGAACCTTAAGCATGTAACTAAAAATATTATGGAAATGTTATTGAATTCATTAGCAAATTTAGTGCTAGGTTTTCATTGAGGAGTAGGTTATATTACTCATAATGAAG--AAAAATGTTCATTTTAAGTACATTAACATAAATACCATCAATATTGTTTATCATGTTTAAATGTTCACTTAAAGCAATTCAGTTAAAATTCTGCATATCATACAATTTTATAGTTTGCTAGTAGGTTACAAGTAAATAGTCACCCAAATAAAA-----------ACATCA--TGTTTTCCAC-----------------------------TGGTTGTTGCTC-TTTTTAGGTGAGCATTTGATGTATACCAACAGAGAGAGGATAATAACAAATCGCTAATTTCTTTCATCACTATATAAAGGTGGCTTCAGGATAGAATAGTATCAGG i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46821462 783 - 99891981 aaagcacaatcacgccactgcattccagcctgggcaaaagagcaagattctgtctcaatcaatcaatcaatcaatcaatcaatAAAAATataaagaggaagcatttactgtgtatttatatgcccagtattacgtgaagcactttactatcttatcaaatcttcgggatagatcttcagttctcatgaccaccaaagaggacactagagctcagacatgagaagagacatggccaGCCTGTGTCCCCAGGGCCTACGGTCTTACCACTAG--------GTTACAGTGTTTCCAGTTATCACATGTTGTGAGATTTTTGCTTTAAAATGAACC-AAAAAGAACCAAAGGTGAAAAAGGCATAAGCTATTAAAAAGTGGGAGAAACACTAAGAGAACCTTAAGCACATAACTAAAAATATTATGGAAATGTTATTGAATTCATTAGCAAATTTAATTCTAGATTTTCACTGAGGAGTAGGTTATATTATTCATGATGAAG-AAAAAATGTTC-----AAGTATATTAACATAAATACCATCAATATGGTTTATCACGTTTAAATGTGCACTTAAAGCAATTCAGTTAAAATTCTGCATATCATACAATTTTATAGTCTGCTAGTAGGTTACAAGTAAATAGTCATCCAAATAAAAACAGTTAAAACACATGA--TGTTTTCCAC-----------------------------TGGTTGTTGCTC-TTCTTAGGTGAGCATTTGATATATACCAACAGAGAGAGGATAATAACAAATTGCTAATTTCTTTCATCATTATATAAAGGTGGCTTCAGGATAGAATGGTATAagg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55127171 780 + 185818997 aaaccacgatcacaccactgcattccagcctgggtgaaacagcaagattctgtc----------------tcaaTCAATCAATAAAAATGTAAGAAGGAAGcatttactgtgcatgtatatgcctggtattatgtgaagcactttactgtcttatcaaatcttcaggatagatcttcagttctcatgaccacaaaagaggacactaaagctcagacaggagaagagacatggccaGCCTGTGTCCCCAGAGCCTACAGTCTTACCACCAGGTGAGACCGTTACACTGCTTCCAGGTATCACATGTTGTGAGATTTTTACTTTAAAATGAACC-AAAAAAAACCAAAGGCAAAAAAGGCATAAGCTATTAAAAAGTGGGAGAAACACTAAGAGAACCTTAGGCACGTAACTAAAAATATTATGGAAATGTTACTGAATTCATTAGCAAATTTAATTCTAGATTTTCATTGAGGAGTAGGTTATATTGCTCATGATAAAGAAAAAAATGTTCACTTTAAGTATATTAACATAAATACCATCAATATGGTTTATCATGTTTAAACGTTCACTTAAAGCAATTCAGTTAAAATTCTGCATCTCATACAATTTTATAGTTTGCTAGTAGGTTACAAGTAAATAGTCATCCAAGTAAAAACAGTAAAAC-ACATGA--TGTTTTCCAC-----------------------------TGGTTATTGCTC-TTTTTAGGTAAGCACTTGATATATACCAACAGACAGAGGATAATAACAAATTGCTAATTTCTTTCATCATTATACAAAGGTGGCTTCCGGACAGAATAGTGTAAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127719523 780 - 192294377 aaaccacgatcacaccactgcattccagcctgggtgaaacagcaagattctgtc----------------tcaaTCAATCAATAAAAATGTAAGAAGGAAGcatttactgtgcatgtatatgcctggtattatgtgaagcactttactgtcttatcaaatcttcaggatagatcttcagttctcatgaccacaaaagaggacactaaagctcagacaggagaagagacatggccaGCCTGTGTCCCCAGAGCCTACGGTCTTACCACCAGGTGAGACCGTTACACTGCTTCCAGGTATCACATGTTGTGAGATTTTTACTTTAAAATGAACC-AAAAAAAACCAAAGGCAAAAAAGGCATAAGCTATTAAAAAGTGGGAGAAACACTAAGAGAACCTTAGGCACGTAACTAAAAATATTATGGAAATGTTACTGAATTCATTAGCAAATTTAATTCTAGATTTTCATTGAGGAGTAGGTTATATTGCTCATGATAAAGAAAAAAATGTTCACTTTAAGTATATTAACATAAATACCATCAATATGGTTTATCATGTTTAAACGTTCACTTAAAGCAATTCAGTTAAAATTCTGCATCTCATACAATTTTATAGTTTGCTAGTAGGTTACAAGTAAATAGTCATCCAAGTAAAAACAGTAAAAC-ACATGA--TGTTTTCCAC-----------------------------TGGTTATTGCTC-TTTTTAGGTAAGCACTTGATATATACCAACAGACAGAGGATAATAACAAATTGCTAATTTCTTTCATCATTATACAAAGGTGGCTTCCGGACAGAATAGTGTAAGT i macFas5.chr3 C 0 C 0 s manLeu1.NW_012100344v1 74671 809 - 148006 aaaccacgatcacaccactgcattccagcctgggtgaaacagcaagattctgtc----------------tcaaTCAATCAACAAAAATGTAAGAAGGAAGcatttactgtgcatgtatatgcctggtattacgtgaagcactttactgtcttatcaaatcttcaggatagatcttcagttctcatgaccacaaaagaggtcactaaagctcagacaggagaagagacatggccaGCCTGTGTCCCCAGAGCCTACGGTCTTACCACCAGGTGAGACCGTTACACTGCTTCCAGGTATCACATGTTGTGAGATTTTTACTTTAAAATGAACC-AAAAAAAACCAAAGGCAAAAAAGGCATAAGCTATCAAAAAGTGGGAGAAACACTAAGAGAACCTTAAGCACGTAACTAAAAATATTATGGAAATGTTACTGAATTCATTAGCAAATTTAATTCTAGATTTTCATTGAGGAGTAGGTTATATTGCTCATGATAAAGAAAAAAATGTTCACTTTAAGTATATTAACATAAATACCATCAATATGGTTTATCATGTTTAAACGTTCACTTAAAGCAATTCAGTTAAAATTCTGCATCTCATACAATTTTATAGTTTGCTAGTAGGTTACAAGTAAATAGTCATCCAAGTAAAAACAGTAAAAC-ACATGA--TGTTTTCCACTGGTTATTGCTCTTTTTAGGTAAGCACTTTGGTTATTGCTC-TTTTTAGGTAAGCACTTGATATATACCAACAGACAGAGGATAATAACAAATTGCTAATTTCTTTCATCATTATACAAAGGTGGCTTCAGGACAGAATAGTGTAAGT i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e cerAty1.NW_012005081v1 60460 3049 - 113584 I e saiBol1.JH378167 188229 2 + 13147851 I e colAng1.NW_012116633v1 814156 2173 + 1536524 I e chlSab2.chr21 124177233 1997 - 127223203 I e macNem1.NW_012013022v1 9023364 2187 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=114208.000000 s hg38.chr3_KI270784v1_alt 47990 86 + 184404 GCAATGATGAATTTGAAATCTAACATCAATTCAGTGATGCATCAAGATAAAAGTAGAGACAACAGGGGCACCTTGGTGAGTACTGA s panTro5.chr1 222331695 86 + 228573443 ACAATGATGAATTTGAAATCTAACATCAATTCAGTGATGCATCAAGATAAAAGTAGAGACAATAGGGGCACCTTGGTGAGTACTGA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 38315 86 - 1329735 GCAATGATGAATTTGAAATCTAACATCAATTCAGTGATGCATCAAGATAAAAGTAGAGACAATAGGGGCACCTTGGTGAGTACTGA i gorGor5.CYUI01015648v1 C 0 C 0 s rheMac8.chr3 55127951 86 + 185818997 GCAATGACGAATTTGAAATCTAATGTCAACTCAGTGATGCAGCAAGATAAAAGTAGAGACAATAGGGGCACCTTGGTGAGTACTGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127720303 86 - 192294377 GCAATGACGAATTTGAAATCTAATGTCAACTCAGTGATGCAGCAAGATAAAAGTAGAGACAATAGGGGCACCTTGGTGAGTACTGA i macFas5.chr3 C 0 C 0 s manLeu1.NW_012100344v1 75480 86 - 148006 GCAATGACGAATTTGAAATCTAATGTCAACTCAGTGATGCAGCAAGATAAAAGTAGAGACAATAGGGGCACCTTGGTGAGTACTGA i manLeu1.NW_012100344v1 C 0 M 979 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e cerAty1.NW_012005081v1 60460 3049 - 113584 I e saiBol1.JH378167 188229 2 + 13147851 I e colAng1.NW_012116633v1 814156 2173 + 1536524 I e chlSab2.chr21 124177233 1997 - 127223203 I e macNem1.NW_012013022v1 9023364 2187 - 10413719 I e nomLeu3.chr17 46822245 0 - 99891981 C e panPan2.chr7 56735359 33229 + 162613886 I a score=49740.000000 s hg38.chr3_KI270784v1_alt 48076 60 + 184404 ACAt----tttatttatttatttattttgagatggagttttgctctttttgcccaggctacagt s panTro5.chr1 222331781 60 + 228573443 ACAt----tttatttatttatttattttgagatggagttttgctctttttgcccaggctagagt i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 38401 60 - 1329735 ACAt----tttatttatttatttattttgagatggagttttgctctttttgcccaggctagagt i gorGor5.CYUI01015648v1 C 0 C 0 s rheMac8.chr3 55128037 63 + 185818997 -Ctttttatttatttatttatttattttgagatggagttttgctccttttgcccaggctagagt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127720389 63 - 192294377 -Ctttttatttatttatttatttattttgagatggagttttgctccttttgcccaggctagagt i macFas5.chr3 C 0 C 0 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e cerAty1.NW_012005081v1 60460 3049 - 113584 I e saiBol1.JH378167 188229 2 + 13147851 I e colAng1.NW_012116633v1 814156 2173 + 1536524 I e manLeu1.NW_012100344v1 75566 979 - 148006 M e chlSab2.chr21 124177233 1997 - 127223203 I e macNem1.NW_012013022v1 9023364 2187 - 10413719 I e nomLeu3.chr17 46822245 0 - 99891981 C e panPan2.chr7 56735359 33229 + 162613886 I a score=281312.000000 s hg38.chr3_KI270784v1_alt 48136 244 + 184404 gcaatggtgccaacctcgcctcactgcaacctctgcctcctgggttcaagcgattctcctgccttggcctcccgaatagctgggattacagacatgcgccaccacacccgtctaattttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcgaactcccgacct-agatatctgcctgccttggcctcccaaagtgctgggattacaggtgtgagccaccgcgcccag-----------------------------------------------A s panTro5.chr1 222331841 243 + 228573443 gcaatggtg-caacctcggctcaccacaacctctgcctcctgggttcaagcgattctcctgccttggcctcccgaatagctgggattacagacatgtgccaccacacccgtctaattttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcgaactcccgacct-agatatctgcctgccttggcctcccaaagtgctgggattacaggtgtgagccaccgcacccag-----------------------------------------------A i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 38461 243 - 1329735 gcaatggtg-caacctcggctcaccgcaacctctgcctcctgggttcaagcgattctcctgccttggcctcccgaatagctgggattacagacatgcgccaccacacccgtctaattttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcgaactcccgacct-agatatctgcctgccttggcctcccaaagtgctgggattacaggtgtgagccaccgcgcccag-----------------------------------------------A i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46822245 290 - 99891981 gcaatggct-caatcttggctcactgcagcctctgcctcccaggttcaagcgattctcctgcctcagcctcctgagtagctgggattacagacatgcgccaccacgctcgtctaattttgtatttttagtagagatggggtttctccatgttggtcaggctggtcttgaactcccgacct-agatatctgcctgccttagcctcccaaagtgctgggattacaggcgtaagccactgcacccagcGTATTTTAAGTATTTTTATCTTCCACTTTTTATTTATCTGGGTCCAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55128100 236 + 185818997 gcaatggtg-caatctcggctcaccacaacctctgcctcacgggttcaagcgatcctcctgcctcagcctcccaagtagcagggattacagacatgtgcc--------catctaattttctatttttagtagagatggggtttctccacattggtcaggctggtcttgaacgcccgacctcaagtatctgcctgtctcgacctctcaaagtgctgggattacaggcgtgagccaccatgcccgg-----------------------------------------------A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127720452 236 - 192294377 gcaatggtg-caacctcggctcaccacaacctctgcctcacgggttcaagcgatcctcctgcctcagcctcccaagtagcagggattacagacatgtgcc--------catctaattttgtatttttagtagagatggggtttctccacattggtcaggctggtcttgaacgcccgacctcaagtatctgcctgtctcgacctctcaaagtgctgggattacaggcgtgagccaccatgcccgg-----------------------------------------------A i macFas5.chr3 C 0 C 0 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e cerAty1.NW_012005081v1 60460 3049 - 113584 I e saiBol1.JH378167 188229 2 + 13147851 I e colAng1.NW_012116633v1 814156 2173 + 1536524 I e manLeu1.NW_012100344v1 75566 979 - 148006 M e chlSab2.chr21 124177233 1997 - 127223203 I e macNem1.NW_012013022v1 9023364 2187 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=122868.000000 s hg38.chr3_KI270784v1_alt 48380 56 + 184404 TGAATTCCAAATTTAACAAAGCAGACTAAGAGAAACAATTCATTTAAAAAAATAAT s panTro5.chr1 222332084 56 + 228573443 TGAATTCCAAATTTAACAAAGCAGACTAAGAGAAACAATTCATTTAAAAAAATAAT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 38704 56 - 1329735 TGAATTCCAAATTTAACAAAGCAGACTAAGAGAAACAATTCATTTAAAAAAATAAT i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46822535 56 - 99891981 CGAATTCCAAATTTAACAAAGCAGACTAAGAGAAACAATTCATTTAAAAAAATGAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55128336 56 + 185818997 CGAATTCCAAATTTAATGAAGCAGACTAAGAGAAACAATTCATTTTAAAAAATAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127720688 56 - 192294377 CGAATTCCAAATTTAACGAAGCAGACTAAGAGAAACAATTCATTTTAAAAAATAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9025551 56 - 10413719 TGAATACCAAATTTAACAAAGCAGATTAAAAGAAAAAATTAGTTTCAAAAAATAAT i macNem1.NW_012013022v1 I 2187 C 0 s colAng1.NW_012116633v1 816329 56 + 1536524 TGAATACCGAATTTAACAAAGCAGATTAAGAGAAAAAATTAGTTTCAAAAAATAAT i colAng1.NW_012116633v1 I 2173 C 0 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e cerAty1.NW_012005081v1 60460 3049 - 113584 I e saiBol1.JH378167 188229 2 + 13147851 I e manLeu1.NW_012100344v1 75566 979 - 148006 M e chlSab2.chr21 124177233 1997 - 127223203 I e panPan2.chr7 56735359 33229 + 162613886 I a score=337088.000000 s hg38.chr3_KI270784v1_alt 48436 301 + 184404 ATTTggccaggcatggtggctcacacctataatcccagcactttgggaggctgaggtgagtggatcaggaggtcagcagttcaagaccagcctagccaagatcatgaaaccccgtctctactaaaaatacaaaaatcagccaggcgtggtggctggtgcctgtaatcctagctgctcgggaggctgaggcagagaactgcttgaacccgggaggcggaggttgcagtgagccgagatcgtgccactgcactccagcctgggtgacagagtgaggctccgtctcaaaaaaaataaataaaTA s panTro5.chr1 222332140 301 + 228573443 ATTTggccaggcgtggcggctcacacctgtaatcccagcactttgggaggctgaggtgagtggatcaggaggtcagcagttcaagaccagcctagccaagatcatgaaaccccgtctctactaaaaatacaaaaatcagccaggcgtggtggctggtgcctgtaatcctagctgctcaggaggctgaggcagagaactgcttgaacccgggaggcggaggttgcagtgagccgagatcgtgccactgcactccagcctgggcgatagagtgaggctccgtctcaaaaaaaataaataaaTA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 38760 301 - 1329735 ATTTggccaggcatggcggctcacacctgtaatcccagcactttgggaggctgaggtgagtggatcaggaggtcagcagttcaagaccagcctagccaagatcatgaaaccccgtctctactaaaaatacaaaaatcagccaggcgtggtggctggtgcctgtaatcctagctgctcgggaggctgaggcagagaactgcttgaacccgggaggcggaggttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagtgaggctccgtctcaaaaaaaataaataaata i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46822591 273 - 99891981 ATTTggccaggcacagtggctcacacctgtaatgccagcacttttggaggccaaggcgggtggatcaggaggtcaggagttcaaaaccagcctggccaagatcgtgataccctgtctctactgaaaatacaaaaatcagcgaggcatggtggctgacgcctgtaattccagctgctcagg------------------------acgcgggaggctgaggttgcagtgagctgagatcgtgccactgcactccagcctgggcaatagagcgaggctctgtctcaaaaaa---aaat-aata i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55128392 288 + 185818997 ATTTggccaggcacggtggctcacacctgtaatcccagcactttgggaggctgaggcaggtgga--------tcagcagttcaagaccagcctggccaagatcatgatacc--gtctct--taaaaatacaaaaatcagccagacgtggtggctggcgcctgtaaacccagctgctcaggaggctgaggcagagaactgcttcaacccaggaggcagaggttgcaatgagcagagatcacaccactgcactccagcctgggtgacagagtgaggctctgtctcaaaaaaTAATAAT-AATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127720744 288 - 192294377 ATTTggccaggcacggtggctcacacctgtaatcccagcactttgggaggctgaggcaggtgga--------tcagcagttcaagaccagcctggccaagatcatgatacc--gtctct--taaaaatacaaaaatcagccagacgtggtggctggcgcctgtaaacccagctgctcaggaggctgaggcagagaactgcttcaacccaggaggcagaggttgcaatgagcagagatcacaccactgcactccagcctgggtgacagagtgaggctctgtctcaaaaaaTAATAAT-AATA i macFas5.chr3 C 0 C 0 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e cerAty1.NW_012005081v1 60460 3049 - 113584 I e saiBol1.JH378167 188229 2 + 13147851 I e colAng1.NW_012116633v1 816385 0 + 1536524 C e manLeu1.NW_012100344v1 75566 979 - 148006 M e chlSab2.chr21 124177233 1997 - 127223203 I e macNem1.NW_012013022v1 9025607 0 - 10413719 C e panPan2.chr7 56735359 33229 + 162613886 I a score=201098.000000 s hg38.chr3_KI270784v1_alt 48737 91 + 184404 ATTCAATGAAATTCCTAAGATCCAGGGCTTTGCAATAAATATGTAAATAAATTTCCAATCTCCATACTGAAAGTTTAAAAGAAATGCTA----AC s panTro5.chr1 222332441 91 + 228573443 ATTCAATGAAATCCCTAAGATCCAGGGCTTTGCAATAAATATGTAAATAAATTTCCAATCTCCATACTGAAAGTTTAAAAGAAATGCTA----AC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 39061 91 - 1329735 aTTCAATGAAATCCCTAAGATCCAGGGCTTTGCAATAAATATGTAAATAAATTTCCAATCTCCATACTGAAAGTTTAAAAGAAATGCTA----AC i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46822864 87 - 99891981 aTTCAATGAAATCCCTAAGATCCAGGGCTTTGCAATAAATATGTAAATAAATTCCCAATCTCCATGCTGAAAGTTTAAAAGAAATG--------C i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55128680 89 + 185818997 ATTCAGTGAAATCCCTAAGATCCAGGGCTTTGCAATAAATATGTAAATAAATTCCCAATCTCCATGCTGAAAGTTTAAAAGAAATGCTA------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127721032 89 - 192294377 ATTCAGTGAAATCCCTAAGATCCAGGGCTTTGCAATAAATATGTAAATAAATTCCCAATCTCCATGCTGAAAGTTTAAAAGAAATGCTA------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9025607 91 - 10413719 ATTCAATTAAATTCCTAAGATCCAGGGCTTTGCAATAAATATGTAAATAAATCCCCAATATCCATGCTGAAAGTTTAAAAGAAATGCTAAC---- i macNem1.NW_012013022v1 C 0 C 0 s colAng1.NW_012116633v1 816385 91 + 1536524 ATTCAATTAAATCCCTAAGATCCAGGGCTTTGCAATAAATATGTAAATAAATCCCCAATATCCATGCTGAAAGTTTAAAAGAAATGCTA--AC-- i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e cerAty1.NW_012005081v1 60460 3049 - 113584 I e saiBol1.JH378167 188229 2 + 13147851 I e manLeu1.NW_012100344v1 75566 979 - 148006 M e chlSab2.chr21 124177233 1997 - 127223203 I e panPan2.chr7 56735359 33229 + 162613886 I a score=96360.000000 s hg38.chr3_KI270784v1_alt 48828 34 + 184404 TAATAACTAAAGAAATACAACTTTTCCTCAGCTT s panTro5.chr1 222332532 34 + 228573443 TAATAACTAAAGAAATACAACTTTTCCTCAGCTT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 39152 34 - 1329735 TAATAACTAAAGAAATACAACTTTTCCTCAGCTT i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46822951 34 - 99891981 TAATAATTAAAGAAATACAACTTTTCCTTAGCTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55128769 32 + 185818997 --ATAATTAAAGAAACACAACTTTTCCTTAGCTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127721121 32 - 192294377 --ATAATTAAAGAAACACAACTTTTCCTTAGCTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9025698 33 - 10413719 -GATAATTAAACAAATACAACTTTTCCTCAGCTT i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 63509 34 - 113584 TAATAATTAAAGAAATACAACTTTTCCTTAGCAT i cerAty1.NW_012005081v1 I 3049 C 0 s colAng1.NW_012116633v1 816476 33 + 1536524 -GATAATTAAAGAAATACAACTTTTCCTCAGCTT i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e saiBol1.JH378167 188229 2 + 13147851 I e manLeu1.NW_012100344v1 75566 979 - 148006 M e chlSab2.chr21 124177233 1997 - 127223203 I e panPan2.chr7 56735359 33229 + 162613886 I a score=761637.000000 s hg38.chr3_KI270784v1_alt 48862 347 + 184404 TGCAGCAATCTAGAAACAAAGTGTG-----------TAGAC----ACTACAAAGCACCTTACAAGGAGAAACATGTAAGGATGGCATGACTCGCCGGCAGCCCTGGGCTTGTCCACGGTACCCCCATGATGAACAGTAACTCCACTGTGTAAACGCCCATGAACATAAGATTACAAGACTTTTCCAGTTTAGACATACCATATTTTCTTTCAGACAATTCTTCAGTTTGTTTACGTAGATCAGCGATACGATGATTCCATTTCTCTGAAAACCAAGCAAAAGTTGCTTCTCAATAACACGTCCCTATGTCAGAGCAGCACTAACGTATAATGACTGATTTCATATATTTTACATTCTAACAG s panTro5.chr1 222332566 347 + 228573443 TGCAGCAATCTAGAAACAAAGTGTG-----------TAGAC----ACTACAAAGCACCTTACAAGGAGAAACGTGTAAGGATGGCATGACTCGCCGGCAGCCCTGGGCTTGTCCACGGTACCCCCATGATGAAGAGTAACTCCATTGTGTAAACACCCATGAACATAAGATTACAGGACTTTTCCAGTTTAGACATACCATATTTTCTTTCAGACAATTCTTCAATTTGTTTACATAGATCAGCGATACGATTATTCCACTTCTCTGAAAATCAAGCAAAAGTTGCTTCTCAATAATACGTCCCTATGTCAGAGCAGCACTAACGTATAATGACTTATTTCATATATTTTACATTCTAACGG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 39186 346 - 1329735 TGCAGCAATCTAGAAACAAAGTGTG-----------TAGAC----ACTACAAAGCACCTTACAAGGAGAAACGTGTAAGGATGGCATGACTCGCCGGCAGCCCTGGGCTTGTCCACGGTACCCCCATGATGAACAGTAACTCCATTGTGTAAACGCCCATGAACATAAGATTACAGGACTTTTCCAGTTTAGACATACCATATTTTCTTTCAGACAATTCTTCAATTTGTTTACGTAGATCAGCGATACGA-GATTCCATTTCTCTGAAAATCAAGCAAAAGTTGCTTCTCAATAATACGTCCCTATGTCAGAGCAGCACTAACGTATAATGACTGATTTCATATATTTTACATTCTAACAG i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46822985 345 - 99891981 TGCAGCAATCTAGAAACAAAGAATG-----------TTTCT----AATATTA--CACCTTACAAGGAGAAACGTGTAAGAATGGCATGACTCAGCGGCAGCCCTGGGCTTGTCCACGGTACCCCCATGATGAACAGTAACTTCATTGTGTAAATGCTCATGAACAAAGGATTACATGACTTTTCCAGTTTAGACATATCATATTTTCTTTCAGACAATTCTTCAACTCGTTTACGTAGATCAGTGATAAGATTATTCCACTTCTCTAAAAATTGAGCAAAAGTTGATTCTCAATAATACGTCCCTATGTCAGAGCAGCACTAACATATAAGAACTTATTTCATATATTTTACATTATAACAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55128801 357 + 185818997 TGCAGCAATTTAGAAACAGAGAGTGTTTCCAATATTTAGAC----ACTACGAAGCACCTGACAAGGAGAAACGTGTAAGGA-GGCATGACTCACCGGCAGCCCTGGGCCTGTCCACGGTACCCCCATGATGAAGAGTAACTCCACTGTGTAAATGCTCATGAACACAGGATTACAGGACTTTTCCAGTTTAGACATACCATATTTTCTTTCAGACAATTCTTCAACTTGCTTATGTAGATCAGCAATACGATTATTCCATTTCTCTGAAAACTGAGCAAAAGCGGATTCTCAATAATACATCCCTATGTCAGAGCAGCACTAACATATAAGAACTTATTTCATATATTTTACATTCTAACAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127721153 357 - 192294377 TGCAGCAATTTAGAAACAGAGAGTGTTTCCAATATTTAGAC----ACTACGAAGCACCTGACAAGGAGAAACGTGTAAGGA-GGCATGACTCACCGGCAGCCCTGGGCCTGTCCACGGTACCCCCATGATGAAGAGTAACTCCACTGTGTAAATGCTCATGAACACAGGATTACAGGACTTTTCCAGTTTAGACATACCATATTTTCTTTCAGACAATTCTTCAACTTGCTTATGTAGATCAGCAATACGATTATTCCATTTCTCTGAAAACTGAGCAAAAGCTGATTCTCAATAATACATCCCTATGTCAGAGCAGCACTAACATATAAGAACTTATTTCATATATTTTACATTCTAACAG i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 63543 357 - 113584 TGCAGCAATCTAGAAACAAAGAATGTTTCCAATATTTAGAC----ACTACAAAGCACCTGACAAGGAGAAATGTGTAAGGA-GGCATGACTCACCGGCAGCCCTGGGCCTGTCCACGATACCCCCATGATGAAGAGTAACTCCACTGTGTAAATGCTCATGAACACAGGATTACAGGACTTTTCCAGTTTAGACATACCATATTTTCTTTCAGACAATTCTTCAACTTGCTTATGTAGATCAGCAATACGATTATTCCATTTCTCTGAAAATCGAGCAAAAGTTGATTCTCAATAATACGTCCCTATGTCAGAGCAGCACTAACATATAATGACTTATTTCATATATTTTATATTCTAACAA i cerAty1.NW_012005081v1 C 0 C 0 s colAng1.NW_012116633v1 816509 353 + 1536524 TGCAGTAATCTAGAAACAAAGAATGTTTCTAATATTTAGACAGAAACTACAAAGCAACTTACAAGGAGAGACGTGTAAGGATGGCAGGATTCACCAGGAGCCCTGGGCTTGTCCACAGTACCCCCATGATAAACAATAACTCCACTGTGTAA------ATGAACAAAGTATCACAGGACTTTTCCAATTTAAACATACCGTATTTTCTTTCAGACAATTCTTCAACTTGTTTATATAGATCAGCAATACGATTATTCCATTTCTCTGAAAACTGAGCAAAAGTTGATTCTCAATAATATGTCCCTAGGTCAGAGCAGCACTAACATAT---GACTTATTTCCTACATTTTACATACTAACAG i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e saiBol1.JH378167 188229 2 + 13147851 I e manLeu1.NW_012100344v1 75566 979 - 148006 M e chlSab2.chr21 124177233 1997 - 127223203 I e macNem1.NW_012013022v1 9025731 0 - 10413719 C e panPan2.chr7 56735359 33229 + 162613886 I a score=1441392.000000 s hg38.chr3_KI270784v1_alt 49209 577 + 184404 TCCATATCATTTTACTGCTTTC--AAGAAAAAATTTCCCCTTCTTGGTGGTTCTTAGAATTGGTTTAATGGGAGACTATTAGAGAAGC-------------------------------------TGAAAAGCAGGAGGGCAGAAAAGTTCAATCAAATTAAACACAATAACAGGGAGGTCACAATGAGGCGGTCTCCAGGGGTCTTTTAGCAAACTTCCTAAAACATGTCTCAGCTGTGT-GA-AATAAGACTTTACAGCAgccgggt-gcagtggtgcaggcctgtaatcccagcactttg-gcagcagaggcaggcggatcactttgagctcagggcaacatagccaaaa-cccccctccctagccc---------------cacccccaccccgtccctaccaaaaatacaaaac--agcagggcatggtggcgggcgcctgtagtcccagctactcaggaggctgag-gcagg-agaatcacctgaacccaggaggcagacattgcagtgagccaaga-tcacgccactgccagcctggatgacagagcaagactccacctcaaaaa------aaaacaaaaacaaaaaC------ACAAGGT---TAAGAGG-GACCCCCGACCTTACAGATACAAGTTTAAGAGGGACCC s panTro5.chr1 222332913 574 + 228573443 TCCATATCATTTTACTGCTTTC--AAGAAAAAATTTCCCCTTTTTGGTGGTTCTTAGAATTGGTTTAATGGGAGACTATTAGAGAAGC-------------------------------------TGAAAAGCAGGAGGGCAAAAAAGTTCAATCAAATTAAACACAATAACAGGGAGGTCACAATGAGGCGGTCTCCCGGGGTGTTTTAGCAAACTTCCTAAAACATGTCTCAGCTGTGT-GA-AATAAGACTTTACAGCAgccgggt-gcagtggtgcaggcctgtaatcccagcactttg-gcagcagaggcaggcggatcgctttgagctcagggcaacatagccaaaa-cccccctccctagccc---------------cacccccaccccgtccctaccaaaaatacaaaac--agcagggcatgatggcaggcgcctgtagtcccagctactcaggaggctgag-gcagg-agaatcacctgaacccaggaggcagacattgcagtgagccaaga-tcacgccactgctagcctggatgacagagcaagattccacctc--aaa------aaaacaaaaac-aaaaC------ACAAGAT---TAAGAGG-GACCCCCAACCTTACAGATACAAGTTTAAGAGGGACCC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 39532 573 - 1329735 TCCATATCATTTTACTGCTTTC--AAGAAAAAATTTCCCCTTTTTGGTGGTTCTTAGAATTGGTTTAATGGGAGACTATTAGAGAAGC-------------------------------------TGAAAAGCAGGAGGGCAGAAAAGTTCAATCAAATTAAACACAATAACAGGGAGGTCACAATGAGGCGGTCTCCAGGGGTCTTTTAGCAAACTTCCTAAAACATGTCTCAGCTGTGT-GA-AATAAGACTTTACAGCAGCC-ggt-gcagtggtgcaggcctgtaatcccagcactttg-gcagcagaggcaggcggatcgctttgagctcagggcaacatagccaaaa-cccccctccctagccc---------------cacccccaccccgtccctaccaaaaatacaaaac--agcagggcatggtgg-gggcgcctgtagtcccagctactcaggaggctgag-gcagg-agaatcacctgaacccaggaggcagacattgcagtgagccaaga-tcacgccactgctagcctggatgacagagcaagactccacctc--aaa------aaaacaaaaacaaaaaC------ACAAGAT---TAAGAGG-GACCCCCGACCTTACAGATACAAGTTTAAGAGGGACCC i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46823330 575 - 99891981 TCCATATCATTTTACTACTTTC--AAAAAAATTTTTCCCTTTTTTGGTGGTTCTTAGAATTGGTTCAATGGGAGACTGTCAGAGAAGA-------------------------------------TGAAAAACAGGAGGGCAGAAAAGTTCAATCAAATTAAACACAGTAACAGGGAGGCCACAATGAGGAGGTCTCCAGGTGTCTTTTAGCAAACTTCCTAAAACATGTCTCAGCTGTGTGGA-AAGAAGACTTTACAGCAgccaagt-gtggtggtgcaggcctgtaatcctagcactttg-gcagcagaggcaggaagactgctttgagctcatggcaacatagccaaaa-cctccctccccacccc---------------ca-------cccatctctaccaaaaatacaaaac--tgcagggcgtggtggcaggtgcctgtagtcccagctactcaggaggctgag-gcagg-agaattgcttgaacccaggatgcagacattgcagtaagctgaga-ctgcaccactgccagcctggacgacagagcaagactccacctc--aaaaaagacaaaacaaaaacaaaaaC------ACAAGGT---TAAGAGG-GACCCCAGATCTTAAAGATACAAGTTTAAGAAGGATCC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55129158 555 + 185818997 TCCACATCATTTTACTGCTTTC--AAAAAAAAATTTCCCTTCTTTGGCGGTTCTTAGAATTGGTTTAATGAGAGACTATTAGAGAAGCT------------------------------------TGAAAAGCAAG-GAGCAGAAAACGTCAATCAAATTAAACACGGTAACAGGGACG-CACAA-GAGGA-GTCTCCAGGG--TTTTTAGCGAACTT-CTAAAAC-TGTCTAGCCTGTGT-GG-AATAACAC-TTACAGCAgctgggtggtggtggtgcaggctgttaatccta-cacttcgcgcagcagaggcaggcggatggc-ttgagctcagggtaacatagccaaaa---ctccctcccacccc------------------------accatctctaccaaaaatacaaaac--agccaggcatggtggtgggtg-ctatagtcccatctactcaggaggctgagagcaggaagaatcacttgaacccaggaagcagacgttgcagtgagccgagacccatggcactgccagcctgggagacagagc-acactccacctc--aaaaa--gaaaaacaaaaacaaAAAA--------CAGGT---TAAAGGA----CCCAGACCTTAAAGGTACAAGTTTAAGA-GGACCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127721510 574 - 192294377 TCCACATCATTTTACTGCTTTC--AAAAAAAAATTTCCCTTCTTTGGCGGTTCTTAGAATTGGTTTAATGAGAGACTATTAGAGAAGC-------------------------------------TGAAAAGCAGGAGGGCAGAAAAGTTCAATCAAATTAAACACGGTAACAGGGAGGCCACAATGAGGAGGTCTCCAGGGGTCTTTTAGGAAACTTCCTAAAACATGTCTCAGCTGTGT-GGAAATAAGACTTTACAGCAgctgggt-gtggtggtgcaggcctgtaatcctagcacttcg-gcagcagaggcaggcagatggctttgagctcagggtaacatagccaaaaactcccctccccacccc---------------ca-------cccatctctaccaaaaatacaaaac--agccaggcatggtggtgggtgcctatagtcccatctactcaggaggctgag-gcagg-agaatcacttgaacccaggaagcagacattgcagtgagccgaga-ccatgctactgccagcctggatgacagagcaacactccacctc--aaaaaagaaaaaacaaaaaCAAAAAC--------AAGGT---TAAAGGG-GACCCCAGACCTTAAAGGTACAAGTTTAAGAGGGACCC i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 63900 573 - 113584 TCCACATCATTTTACTGCTTTCAAAAAAAAAAACTTCCCTTTTTTGGTGGT--TTAGAATTGGTTTAATGGGAGATTATTAGAGAAGC-------------------------------------TGAAAAGCAGGAGGGCAGAAAAGTTCAATCAAATTAAACACGGTAACAGGAAGGCCACAATGAGGAGGTCTCCAGGGGTCTTTTAGCAAACTTCCTGAAACATGTCTCAGCTGTGT-GA-AATAAGACCGTACAGCAgccgggt-gtagcggtgcaggcctgtgatcctagcactttg-gcagcagagacaggcggatcgctttgagccaagggcaacacagccaaaa-ccccactccccatccc---------------ca-------cctgtctccaccaaaaatacaaaac--agccgggcacggtggcgggcgcctgtagtctcagctactcaggaggctgag-gcagg-agaatcgcttgaacccaggaggcagacgttgcagtgagccgaga-ccacgccactgccagcctggatggcagagcaagactccatctc--aaaaaacaaaaaaacaaaaaaaaCAC--------AAGCT---TAAGGGGGGACCCCAGACCTTACAGATACAAGTTTAAGAGGGACCC i cerAty1.NW_012005081v1 C 0 C 0 s manLeu1.NW_012100344v1 76545 572 - 148006 TCCACATCATTTTACTGCTTTC--AAAAAAAAATTTCCCTTCTTTGGTGGTTCTTAGAATTGGTTTAATGGGAGACTATTAGAGAAGC-------------------------------------TGAAAAGCAGGAGGGCAGAAAAGTTCAATCAAATTAAACACGGTAACAGGGAGGCCACAATGAGGAGGTCTCCAGCGGTCTTTTAGCAAACTTCCTAAAACATGTCTCAGCTGTGT-GGAAATAAGACTTTACAGCAgccgggt-gcggtggtgcaggcctgtaatcctagcacttcg-gcagcagaggcaggtggatggctttgagctcagggtaacatagccaaaa-cccccctccccacccc---------------ca-------cccatctctaccaaaaatacaaaac--agccaggcatggtggtgggtg---------ccatctactcaggaggctgag-gcagg-agaatcacttgaacccaggaagcagacattgcagtgagccgaga-ccatgctactgccagcctggacgacacagcaacactccacctc--aaaaaagaaaaaacaaaaacaaaaacaaaaacaTAAGGT---TAAAGGG-GACCCCAGACCTTAAAGGTACAAGTTTAAAAGGGACCC i manLeu1.NW_012100344v1 M 979 C 0 s colAng1.NW_012116633v1 816862 624 + 1536524 TCCATATCATTTTACTGCTTTT--GGAAACATTTTTCCCTTTTTTGGTGGTTCTTAGGATTAGTTTAATGGGAGACTATAAGAGAAGTTTTAAAGTTTAGTACCTCTTTTTAACCTTTTAATTTCTGAAAAGCAGGAAGGCAGAACAGATCAATCAAATTAAACACGAAAACAGGGAGACCACAATGAGGAGGTCTCCGGGGGTCTTTTAGCAAACTTCCTAAAACATGTCTCAGCTGTGT-GGAAATAAGATTTTACAGTGG-------CTggtggtgcaggcctgtaatactagcacttcg-ggaacagaggtgggcggatcactttgagctctgggcaacaaagcaaaaa-cccctctcccctccccaactccttgcctccgcc-------ctcatctctaccaaaaatacaaaacttagctggacatggtggcaggtgcctgtagtcccagctattcaggagactgag-gcagg-agaatcacttgaacccaggaggcggatgttgcagtgagccaagg-ccgcaccactgccagcctgggtgacagagcaagactccgtctc--aaaaaagaaaaaaagaaaaaaaaaaa--------aGGTTAAGTAAGAGG-GACCCCAGACCTTAAAAATACAAGTTTAAGAGGGACCC i colAng1.NW_012116633v1 C 0 I 344 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e saiBol1.JH378167 188229 2 + 13147851 I e chlSab2.chr21 124177233 1997 - 127223203 I e macNem1.NW_012013022v1 9025731 0 - 10413719 C e panPan2.chr7 56735359 33229 + 162613886 I a score=2113080.000000 s hg38.chr3_KI270784v1_alt 49786 955 + 184404 CCAAGCAAAAAATGCCAACCCTTTTTCTCCCAATCATTGAAACACCAGGAGGGTGTAACAGTTTTGCAGCCTAGCtgtagcaggctgatgcccccaagatgcccatatcctaatcccgggaactggtgaacatgaccttatatggcaaaaggagctttgcagatataatgaagttaagggtctt----tggctttt------ggggttgatgtactcactcggatccttgtaagagcagagcaggtgat-ggagag-ggtgggaggtgtagtgacagaagcaggaaactccagtcattcgagacgggcagcacaagctgaggagtgcaggccacctctacggccaggaaacggattctcccgcagagcctcggaagctaccgaccctgctcccaccttgactcagtaggacttactgtagaattctggccttcagacctgtaagggaatacattttggttgttttaagtcactaagtgtgtggtaatttgttgcagcagccacaggaaactagtaTTGTAGTGAAGCCTCAAAACCCCCCTGAAGGggctgggctcagtggctcatgcctgtaatcccagcactttgggaggccgacatgggtggatcacttgaggtcaggagttcgagaccagcccagccaacatggtgaaatgccatctatacaaaaaatacaaaaactagccgggcatggtggcacatgcctgtaatctcagctactcaggaggctgagacaggagaattgtttgaaccc----a------ggggggcagaggttgcagtgaactgagattccaccactgcactccagcctgggtgacag-agcgacgctccatctcgaaaac-aaaacaaaacaa---aaaaaCCCCACCT---GAAGGTTTCCAGTTCTGCCAGCACTCTCCCACCCAACCCCCAGAAACAGACATTCCATTGCTGTGGGCCATGGACAGGCAGAAGGAAGCACCTCCTCATGGCAGAGG s panTro5.chr1 222333487 955 + 228573443 CTAAGCAAAAAATGCCAACCCTTTTTCTCCCAATCATTGAAACACCAGGAGGGTGTAACAGTTTTGCAGCCTAGCtgtagcaggctgatgcccccaagatgcccatatcctaatcccgggaactggtgaacatgaccttatatggcaaaaggggctttgcagatataatgaagttaagggtctt----cggctttt------ggggttgatgtactcactcggatccttgtaagagcagagcaggtgatgggagag-ggtgggaggtgtagtgacagaagcaggaaactccagtaattcgagacgggcagcacaagctgaggagtgcaggccacctctacggccaggaaacggattctcccgcagagcctcggaagccaccgaccctgctcccaccttgactcagtaggacttactgtagaattctggccttcagacctgtaagggaatacattttcgttgttttaagtcactaagtgtgtggtaatttgttgcagcagccacaggaaactagtaTTGTAGTGAAGCCTCAAAACCCCCCTGAAGGggctgggctcagtggctcatgcctgtaatcccagcactttgggaggccgaggtgggtggatcacttgaggtcaggagctcgagaccagcccagccaacatggtgaaatgccatctatacaaaaaata-aaaaactagccaggcatggtggcacatgcctgtaatctcagctactcaggaggctgagacaggagaattgtttgaaccc----a------gtggggcggaggttgcagtgaactgagattccaccactgcactccagcctgggtgacag-agagacgctccatctcgaaaac-aaaacaaaacaa---aaaaaCCCCACCT---GAAGGTTTCCAGTTCTGCCAGCAGTCTCCCACCCAACCCCCAGAAGCAGACATTACATTGCTGTGGGCCATGGACAGGCAGAAGGAAGCACCTCCTCATGGCGGAGG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 40105 949 - 1329735 CTAAGCAAAAAATGCCAACCCTTTTTCTCCCAATCATTGAAACACCAGGAGGGTGTAACAGTTTTGCAGCCTAGCtgtagcaggctgatgcccccaagatgcccatatcctaatcccgggaactggtgaacatgaccttatatggcaaaagg-gctttgcagatataatgaagttaagggtctt----tggctttt------ggggttgatgtactcactcggatccttgtaagagcagagcaggtgat-ggagag-ggtgggaggtgtagtgacagaagcaggaaactccagtcattcgagacgggcagcacaagctgaggagtgcaggccacctctacggccaggaaacagattctcccgcagagcctcggaagccaccgaccctgctcccaccttgactcagtaggacttactgtagaattctggccttcagacctgtaagggaatacattttggttgttttaagtcactaagtgtgtggtaatttgttgcagcagccacaggaaactagtaTTGTAGTGAAGCCTCAAAA-CCCCCTGAAGGggctgggctcagtggctcatgcctgtaatcccagcactttgggaggccgaggtgggtggatcacttgaggtcaggagttcgagaccagcccagccaacatggtgaaatgccatctatac-aaaaatacaaaaactagccgggcatggtggcacatgcctgtaatctgagctactcaggaggctgagacaggagaattgtttgaaccc----a------ggggggcggaggttgcagtgaactgagattccaccactgcactccagcctgggtgacag-ag-gatgctccatctcgaaaac-aaaacaaaacaa---aaaaaCCCCA-CT---GAAGGTTTCCAGTTCTGCCAGCAGTCTCCCACCCAA-CCCCAGAAGCAGACATTCCATTGCTGTGGGCCATGGACAGGCAGAAGGAAGCACCTTCTCATGGCAGAGG i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46823905 972 - 99891981 CTAAGCAAAAAATGCCAACCCTTTTTCTCCCAATCATTGAAACACCAGGAGGGTGTAATAGTTTTGCAGCCTAGCtgtagcaggctgatgcccccaagatgcccatatcctaatcccgggaaccagtgaacatgaccttatatggcaaaaggggctttgcagatataatgaagttaagggtctt----tggcttgtactggcggggctgatgtactcacccggatccttatgagagcagagaaagtgat-ggagag-ggtgggaggtatagtgatggaagcaggaaactccagtcattcgagacggggagcacaagctgagaagtgcaggctgcctccggggccaggaaatggattctcccacagagcctcggaaggcaatgaccctgctcccaccttgcctcagtgggagttactttagaattctggctttcagaaccgtaagggaatacatttgtgttgttttaagtcattaagtgtgtggtaatttgttgcagcagccataggaaactagtaTTGTAGTGAAGCCTCAAAACCCACCTGAAGGggctgggctcggtggctcatgcctgtaatcccagcactttgggaggccgaggtgggcggatcacttgaggtcaagagttcgagaccagcctggccaacatggcgaaacgccgtctctacaaaaaatacaagaattagccgggcatggtggcacatgcctgtaatctcagcaacccaggaggctgagatgtgagaactgtttgaacccgtggg------tgggggtggaggttgcagtgagctgagattgcgccactgcactccagcctgggtgacag-agtgaggctccatctcgaaaataaaaacaaaacaaaccaaaaaTCCCACCTGAAGAAGGTTTCCCGTTCTGCCAGCGGTCTCCCACCCAACCACCAGAAGCAGACATTCCATTGCTGTGGGTCATGGACAGGCAGAAGGAAGCGCCTCCTCATGGCAGAGG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55129713 968 + 185818997 CTAAGCAAAAATTG-CAACCCTTTTTCTCTCAATCTTTGCAACACCAGGA-GGTGTAACAAGTTTGCAGCCTAGCtgtagcaggctgatgcccccaagatg-ccatatcctaacccc-gaaactggtgaacatgaccttgtatggcaaaaggggctttgcagatataatgaagttaagggtctttggctggcttgtactggcggggttaatgtactcacccggatccttataagagcagagaaggtgat-ggagag-ggtgggaggtgtagtgacggaagcaggaaactccagtcattcaggacatgcagcacaagctgagaagtgcaggccgcctccagggccaggagacagattcgcccgcagagcctcagaaggcaacaaccctgctcccaccttgcttcagtgggacttactttagaattctggtcttcagaactgtaagggaatacatttgtgttgttttaagtcactaagtgtgtggtaatttgttgcagcagccacgggaaccta-----gtaGTAAAGCCTCAAAACCCATCTGAAGGggctgggctcggtggctcatgtctgtaatcccagcactttgggaggccgaggaggagagatcacttgaggtcaggagttcaagaccagcctggccaacgtggcgaagtgccatctctacaaaaaatacaaaaattagccgggcatggtggcacatacctgtaatctcagctactcaggaggctgagacatgagaattgtttgcacct----ggggtt-ggggggtggaggctgcaatgagctgagattgcaccactgcactcccgcctgggtgacaagagcgaggctctatctcgaaaacaaaaacaaaacaaactaaaaaaCCCACCTGAAGAA-GTTTCCAGTTCTGCCAGCAGTCCCCCACCCAACCCTTGGAAGCAGACATTCCATTGCTGTGGGCCATGGACAGGCAAAAGGAAGCACCTCCTCGTGGCAGAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127722084 972 - 192294377 CTAAGCAAAAAATGCCAACCCTTTTTCTCTCAATCTTTGCAACACCAGGAGGGTGTAACAGTTTTGCAGCCTAGCtgtagcaggctgatgcccccaagatgcccatatcctaatcccgggaactggtgaacatgaccttgtatggcaaaaggggctttgcagatataatgaagttaagggtctttggctggcttgtactggcggggttaatgtactcacccagatccttataagagcagagaaggtgat-ggagag-ggtgggaggtgtagtgacggaagcaggaaactccagtcattcaggacatgcagcacaagctgagaagtgcaggccgcctccagggccaggagacagattctcccgcagagcctcagaaggcaacaaccctgctgccaccttgcttcagtgggacttactttagaattctggtcttcagaactgtaagggaatacattcgtgttgttttaagtcactaagtgtgtggtaatttgttgcagcagccacgggaaccta-----gtaGTAAAGCCTCAAAACCCATCTGAAGGggctgggctcggtggctcatgtctgtaatcccagcactttgggaggccgaggaggagagatcacttgaggtcaggagttcaagaccagcctggccaacgtggcgaagtgccatctctacaaaaaatacaaaaattagccgggcatggtggcacatacctgtaatctcagctactcaggaggctgagacatgagaattgtttgcacct----ggggtt-ggggggtggaggctgcaatgagctgagattgcaccactgcactcccgcctgggtgacaagagcgaggctctatctcgaaaacaaaaacaaaacaaactaaaaaaCCCACCTGAAGAA-GTTTCCAGTTCTGCCAGCAGTCCCCCACCCAACCCTTGGAAGCAGACATTCCATTGCTGTGGGCCATGGACAGGCAAAAGGAAGCACCTCCTCGTGGCAGAGG i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 64473 941 - 113584 CTAAGCAAAAAAAGTGAACCCTTTTTTTCCCAATCATTGAAACACCAGGAGGGTGTAATAGTTTTGCGGCTTAGCtgtagcaggctgatgcccccaagatgcccacatcctaatcccaggaactggtgaacataaccttatatagcaaaaggggctttgcagatataatgaagttaagggtctttggctggcttgtaccggcagggttgatgtactcacccggatccttataagagcagagcaggtgat-ggagagcggagggaggtatagtg---------ggaaactccagtcatttgagacaggaagcacaagctgaggagtgcatgctagctccagggccaggaaatggattctcctgcagagcctcggaaggcatcgaccctgctcccaccttgactcagtgggacttactgtagaattctggccttcagaactgtaagggaatatatttgggttgttttaa---------------gtaatttgttgcagcagctacaggaaactagtGTTGTAGTGAAGCCTCAAAACCCACCTGAAGGggctgggctcggtggctcatgcctgtaatcccagcactttgagaggctgaggtgggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggcaaaatgccatctatacaacaaacacaaaaattagccaggcatggtgggacatgcctgtaatctcagctactcaggaggctgagacatgagaattgtttgaaccc----g------gggggacagaggttgcagtgagctgagattgcgccactgtactccagcctgggtgacac-agcgacgctccatctcggaaac-aaaacaaaaaaaaCT-------CCTCCTGAAGAAGGTTTCCAGTTCCGCCAGCAGTCCCCTACCCAACCCCCAGAAGCAGACATTCTCTTGCTGTGGGCCATGAACAGGCAGAAGGAAGTGCCTCTTCATGGCACAGG i cerAty1.NW_012005081v1 C 0 C 0 s manLeu1.NW_012100344v1 77117 974 - 148006 CTAAGCAAAAAATGCCAACCCTTTTTCTCTCAATCTTTGAAACACCAGGAGGGTGTAACAGTTTTGCAGCCTAGCtgtagcaggctgatgcccccaagttgcccatatcctaatcctgggaactggtgaacatgaccttgtatggcaaaaggggctttgcagatataatgaagttaagggtctttggctggcttgtactggcagggttgatgtactcacccggatccttaaaagagcagagaaggtgat-ggagag-ggtgggaggtgtagtgacggaagcaggaaactctagtcattcaggacgtgcagcacaagctgagaagtgcaggccgcctccagggccaggagacagattcgcccgcagagcctcagaaggcaacaaccctgctgccaccttgcttcagtgggacttactttagaattctggtcttcagaactgtaagggaatacatttgcgttgttttaagtcactaagtgtgtggtaattcgttgcagcagccacgggaaccta-----gtaGTAAAGCCTCAAAACCCATCTGAAGGggctgggctcggtggctcatgtctgtaatcccagcactttgggaggccgaggaggagagatcacttgaggtcaggagttcaagaccagcctggccaacgtggcgaagtgccgtctctacaaaaaatacaaaaattagccaggcatggtggcacatacctgtaatctcagctacttaggaggctgagacatgagaattgtttgcacct----ggggttgggggggtggaggctgcaatgagctgagattgcaccactgcactcccgcctgggtgacaagagggaggctctatctcgaaaacaaaaacaaaacaaaccaaaaaaCCCACCTGAAGAAGGTTTCCAGTTCTGCCAGCAGTCCCCCACCCAACCCTCGGAAGCAGACATTCCATTGCTGTGGGCCATGGACAGGCAAAAGGAAGCACCTCCTCGTGGCAGAGG i manLeu1.NW_012100344v1 C 0 M 2570 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e saiBol1.JH378167 188229 2 + 13147851 I e colAng1.NW_012116633v1 817486 344 + 1536524 I e chlSab2.chr21 124177233 1997 - 127223203 I e macNem1.NW_012013022v1 9025731 0 - 10413719 C e panPan2.chr7 56735359 33229 + 162613886 I a score=694298.000000 s hg38.chr3_KI270784v1_alt 50741 420 + 184404 CCTACCCAGGAGAAACCCAAGGGAAGGCACTACTGGGCTGGCCCCTCTCTGCCAAGGCCATAttc-----------------tttttttttttgaggc-cagtttcactctgtctcccagactggagtgcaggggcacaatctcggctcacttcgacctctgcctccccagttcaagtgattctcctgcctcagtctcctgagtagctgggatgacaggagtgtagcatgcctagctaatttttgtatttctagtagagatgcggttttgccatgttgcccaggctggactcgaactccttgcctcaagtagtccacctgtctcagccccgcaaagtgctggtattacaggagtgagccactgcacccagcATTTGCCAAGACCTTTGATGGCAGGCTTTTTCCAGGTGATCAGTCCTTGTCTGGTCTGGCTCTGCCC s panTro5.chr1 222334442 427 + 228573443 CCTACCCAGGAGAAACCCAAGGGAAGGCACTGCTGGGCTGGCCCCTCTCTGCCAAGGCCATAttc-----ttttt-----tttttttttttttgaggc-cagtttcactctgtctcccagactggagtgcaggggcacaatctcagctcacttcgacctctgcctccccagttcaagtgattctcctgcctcagtctcctgagtagctgggattacaggagtgtagcatgcctagctaatttttgtatttctagtagagatggggttttgccatgttgcccaagctggactcgaactccttgcctcaagtagtccacctgtctcagccccgcaaagtgctgggattacaggagtgagccactgcacccagcATTTGCCAAGACCTTTGATGGCAGGCTTTTTCCAGGTGATCAGTCCTTGTCTGGTCTGGCTCTGCCC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 41054 416 - 1329735 CCTACCCAGGAGAAACCCAAGGGAAGGCACTGCTGGGCTGGCCCCTCTCTGCCAAGGCCATAttc------------------ttttttttttgaggc-cagtttcactctgtctcccagactggagtgca-gggcacaatct-ggctcacttc-acctctgcctccccagttcaagtgattctcctgcctcagtctcctgagtagctgggattacaggagtgtagcatgcctagctaatttttgtatttctagtagagatgcggttttgccatgttgcccaggctggactcgaactccttgcctcaagtagtccacctgtctcagccccgcaaagtgctggtattacaggagtgagccactgcacccagcATTTGCCAAGACCTTTGATGGCAGGCTTTTTCCAGGTGATCAGTCCTTGTCTGGTCTGGCTCTGCCC i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46824877 430 - 99891981 CCTACCCAGGAGGAACCCAAGAGAAGGCACTGCCGGGCTGGCCC--CTCTGCCAAGGCCATAttc-----tttttttttgtttttttttttttcagacacagtttcactctgtctcccagactggagtgaa-tggcacaatctcggctcacttcgacccctgcctcccgggtttaagcaattctcctgcctcagcctcccgagtagctgggattacaggagcgtagcacgcctagctaatttttgtatttttagtagagatggggttttgccatgttgcccaggctagactcgaactcctggcctcaagtgattcacctgtctcagcctcccaaactgctgggattacaggactgagccaccgcacccagcACTTGCCAAGACCTTTGATGGCAGGCTTTTTCCAGGTGATCAGTCCTTGTCTGGTCTGGCTCTGCCC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55130681 433 + 185818997 CCTACCCAGGAGAAACCCAAGGGAAGGCACTGCCTGGCCAGGCT--CTCTGCCAAAGCCATATTATGGTGttttttgtttttgtttttgttttgagacacagtttcactctgtctcccagactggagtgcagtggcacaatcttggctcacttcgacctctgcctccccagtttaagcaattctcctgcctcagcctcctgagtagctggaattacaggaacatagcacgcctagctaa--tttttatttttagtagagatggggttttgccatgttgcccaggctagacttgaacaccttacctcaagtgatccacctgtctcagcctcccaaactgctgggattacaggagtgagccaccgcacccagcACTCGCCAAGGCCTTTGATGGCAGGCTTTTTCCAGGGGATCAGTCCTGGTCTGGTCTGGCTCTG-CC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127723056 435 - 192294377 CCTACCCAGGAGAAACCCAAGGGAAGGCACTGCCTGGCCAGGCT--CTCTGCCAAAGCCATATTATGGTGttttttgtttttgtttttgttttgagacacagtttcactctgtctcccagactggagtgcagtggcacaatcttggctcacttcgacctctgcctccccagtttaagcaattctcctgcctcagcctcctgagtagctggaattacaggaacatagcacgcctagctaatttttttatttttagtagagatggggttttgccatgttgcccaggctagacttgaacaccttacctcaagtgatccacctgtctcagcctcccaaactgctgggattacaggagtgagccaccgcacccagcACTCGCCAAGGCCTTTGATGGCAGGCTTTTTCCAGGGGATCAGTCCTGGTCTGGTCTGGCTCTG-CC i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 65414 420 - 113584 CCTACCCAGGAGAAACCCAAGGGAAGGCACTGCCAGGCTGACCC--CTCTGCTAAGGCCATA----------------ttcttctctttttttgcagcccagtctcactctgtctcccagactggagtgcagtggcacaatcttggctcacttcaacctctgcctccccagttcaagtgattctcctgcctcagcctcctgagtagctgggatgacaggagcgtagcttgcctagctattttttctatttttagtagagatggggttttgcgatgttgcccaggctggactcgaactccttgcctcaagtagtccacctgtctcagcctcccaaactgctgggattacagtagtgagccaccgcacccagcACTCACTAATACCTTTGATGGCAGGCTTTTTCCAGGGGATCAGTCCTGGTCTGGTCTGGCTCTGCCC i cerAty1.NW_012005081v1 C 0 C 0 e aotNan1.NW_018487315v1 6223730 11 - 15679484 I e calJac3.chr2 1462254 1436 + 204313951 I e saiBol1.JH378167 188229 2 + 13147851 I e colAng1.NW_012116633v1 817486 344 + 1536524 I e manLeu1.NW_012100344v1 78091 2570 - 148006 M e chlSab2.chr21 124177233 1997 - 127223203 I e macNem1.NW_012013022v1 9025731 0 - 10413719 C e panPan2.chr7 56735359 33229 + 162613886 I a score=3600.000000 s hg38.chr3_KI270784v1_alt 51161 1 + 184404 C s panTro5.chr1 222334869 1 + 228573443 C i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 41470 1 - 1329735 C i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46825307 1 - 99891981 C i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55131114 1 + 185818997 C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127723491 1 - 192294377 C i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 65834 1 - 113584 C i cerAty1.NW_012005081v1 C 0 C 0 s saiBol1.JH378167 188231 1 + 13147851 C i saiBol1.JH378167 I 2 C 0 s aotNan1.NW_018487315v1 6223741 1 - 15679484 C i aotNan1.NW_018487315v1 I 11 C 0 e calJac3.chr2 1462254 1436 + 204313951 I e colAng1.NW_012116633v1 817486 344 + 1536524 I e manLeu1.NW_012100344v1 78091 2570 - 148006 M e chlSab2.chr21 124177233 1997 - 127223203 I e macNem1.NW_012013022v1 9025731 0 - 10413719 C e panPan2.chr7 56735359 33229 + 162613886 I a score=1446428.000000 s hg38.chr3_KI270784v1_alt 51162 444 + 184404 ACTCTCCTTCTCACCTAGTTGGAATCCCTAGCTACTTTTCAGTAGAGGAGAGTGTGTACCCCAATCCCAGCTTGGT-----TCAGATCTGCATTTAACTCATGGAACCTGGCTGCTC-CCCAGGTTCTGA------AGAAAAAAACGGTCTCTCTGT---GGGTATGATAAAGGATGGGCCTGTCCCCA------------------GGACCCTGTGAGAGGGAAGCCCAATGTCCCACCAGGTTGGCAGGGCTGGGGAAGGGAAAGTGTTATGGCAGCCCCAAGAAAAAAAAGAGGCAGCAGAGGGAGCAGGACAGCGCTCACATGGAACTCATGCCACTGCC----TGAGGGGAGGGAGGAGTGCACGCCAGTGACGTCAGGGGGCAGAGAGGCGCAGTTCCAGGGCGGCTTTCCCCCTCACTTCCTGCCATGTTACTCTGATCGCCTCCAGGTGAGCCTGCCCACTTTGTGCCCA-----------GGG s panTro5.chr1 222334870 448 + 228573443 ACTCTCCTTCTCACCTAGTTGGAATCCCTAGCTACTTTTCAGTAGAGGAGAGTGTGTACCCCAATCCCAGCTTGGT-----TCAGATCTGCATTTAACTCATGGAACCTGGCTGCTC-CCCAGGTCCTGA------AGAAAAAAAGGGTCTCTCTGT---GGGTATGATAAAGGATGGGCCTGTCCCCA------------------GGACCCTGTGAGAGGGAAGCCCAATGTCCCACCAGGTTGGCAGGGCTGGGGAAGGGAAAGTGTTATGGCAGCCCCAAGAAAAACAAGAGGCAGCAGAGGGAGCAGGACAGCACTCACATGGAACTCATGCCACTGCCTGAGTGAGGGGAGGGAGGAGTGCACGCCAGTGACGTCAGGGGGCAGAGAGGCGCAGTTCCAGGGCAGCTTTCCCCCTCACTTCCTGCCATGTTACTCTGATCGCCTCCAGGTGAGCCTGTCCACTTTGTGCCCA-----------GGG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 41471 445 - 1329735 ACTCTCCTTCTCACCTAGTTGGAATCCCTAGCTACTTTTCAGTAGAGGAGAGTGTGTACCCCAATCCCAGCTTGGT-----TCAGATCTGCATTTAACTCATGGAACCTGGCTGCT--CCCAGGTCCTGA------AGAAAAAAACGGTCTCTCTGT---GGGTATGATAAAGGATGGGCCTGTCCCCA------------------GGACCCTGTGAGAGGGAAGCCCAATGTCCCACCAGGTTGGCAGGGCTGGGGAAGGGAAAGTGTTATGGCAGCCCCAAGAAAAAAAAGACGCAGCAGAGGGAGCAGGACAGCGCTCACATGGAACTCATGCCACTGCCTGAGTGA-GGGAGGGAGGAGTGCACGCCAGTGACGTCAGGGGGCAGAGAGGCGCAGTTCCAGGG-GGCTTTCCCCCTCACTTCCTGCCATGTTACTCTGATCACCTCCAGGTTAGCCTGCCCACTTTGTGCCCA-----------GGG i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46825308 452 - 99891981 ACTCTCCCTCTCACCAAGTTGGAATCCCTAGCTACTTTTCAGTAGAGGAGAGTGTGTACCCCAATCCCAGCTTGGTATGGGTCAGATCTGCATTTAACTCATGGAACCTGGCTGCTCAACTAGGCCCTGA------AGAAAAAAAGGGTC-CTCTGT---GGGTATGATACAGGATGGGCCTGTCCCCA------------------GGACCCTGTGAGAGAGTAACCCAATGTCCCACCAGGTTGGCAGGGCTGGGGAAGGGAAAGTGTTATGACAGCCCTAAGAAAAAAAAGAGGCAGCAGAGGGAGCAGAACAGCGCTCACATGGAACTCATGCCACTGCCTGAGTGAGGGGAGGGAGGAGTGCAC-TCAGTGACGTGAGGGGGCAGAGAGGCGCGGTTCCAGGGCGGCTTTCCCCTTCACTTCCTGCCATGTTACTCTGATCTCCTCCAGGTGAGCCTGTCTACTTTGTGCCTA-----------GGG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55131115 453 + 185818997 ACTCTCCCTCTCACCTAGCTGGAATCCCTAGCTCCTTCTCAGTAGAGGAGAGTGTGGACCCCAACCCCAGCTTGGTATGGTTCAGATCTGCGTTTCACTCATGGAACCTGGCTGCTC-CCCAAGCCGTGG------AGAAAAACAGGGTCTCTCTGC---AGGTATGATACAGGATGGGCCTGTCCCCA------------------GGACCCTGTGAGAGGGAAGCCCAATGTCCCACCAGACTGGCAGAGCTGGGAAAGAGAAAGTTTTATGCTAGCCCTAAGGAAAAAAACAGGCAGCAGAGGAAGCAGGACAGCACTCACATGGAACCCATGTCACTGCCTGAGTGAGGTGAGGGAGGAGTGCACCCCAGTGACATGAGGGGGAAGAGAGGCGCGGTTCTAGGGCAGCTTTCCCCCTCATTTCCTCCCATGTTACTCTGATCCCCTCCAGGTGAGCCTGCCCACTTTGTGCCCA-----------GGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127723492 453 - 192294377 ACTCTCCCTCTCACCTAGCTGGAATCCCTAGCTCCTTCTCAGTAGAGGAGAGTGTGGACCCCAACCCCAGCTTGGTATGGTTCAGATCTGCGTTTCACTCATGGAACCTGGCTGCTC-CCCAAGCCGTGG------AGAAAAACAGGGTCTCTCTGC---AGGTATGATACAGGATGGGCCTGTCCCCA------------------GGACCCTGTGAGAGGGAAGCCCAATGTCCCACCAGATTGGCAGAGCTGGGAAACAGAAAGTTTTATGATAGCCCTAAGGAAAAAAACAGGCAGCAGAGGAAGCAGGACAGCACTCACATGGAACCCATGTCACTGCCTGAGTGAGGTGAGGGAGGAGTGCACCCCAGTGACATGAGGGGGAAGAGAGGCGCGGTTCTAGGGCAGCTTTCCCCCTCATTTCCTCCCATGTTACTCTGATCCCCTCCAGGTGAGCCTGCCCACTTTGTGCCCA-----------GGA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 65835 463 - 113584 ACTCTCCCTCTCACCTAGTTGGAATCCCTAACTACTTTTCAGTAGAGGACAGTGTATACCCCAATCCTAGCTTGGTATGGTTCAGATCTGCATTTAACTCATGGAACCTGGCTGTTC-CCAAGGCCCTGA------AGAAAAAAAGGGTCTCTCTGT---GGGTGTGATACAGGATGGGCCTGTCCCCA------------------GGACCCCGTGAGGGGGAAGTCCAATGTCCCACCAGGTTGGCAGGGCTGGGGAAGGGAAAGTATTATGGTAGCCCCAAGAAGAAAAAGAGGCAGCAGAGGCAGCAGGACATCACTCCCATGGAACTCATGCCACTGCCTGAGTGAGTGGAGGGAGGAGTGCA-CCCAGTGACGTCAGGGGGCAGAGATGCATGGTTCCAGGGTGGCTTTCCCCCTCACTTCCTGCCATGTTACTCTGATCCCCTCCAGGTGAGCCTGCCCACTTTGTGCCCAGGGTTGCCGCTGGG i cerAty1.NW_012005081v1 C 0 C 0 s calJac3.chr2 1463690 457 + 204313951 ACTCTCCCTCTCACCAAGTTGGAATCCCTAGCTACTTTTCAGAAGAGCAGAGTGTGTACCCCAATCCCAGCTTAGTATGGTTCACATCTGCATTTAACTCATAAAACCTGGCTACTC-CCCATGCCCTGG----AGAAAAAAAAAAGGTCTCTCTGTGGTGGGTATCATTCAGGATGGGACTGTTCCCATTCAGGATGGGCCTGCCCTGACCCTATGAGAAGGAAGCCCAGTTTCCCACCAGGTTGGCAGGGCTAGGAAAAGGAACGTGTTATAGTAGCCCCAAGACCAAAAAGAGGCAGCAGAGAGAGTAGGACAGCACTCCTAAGGAACTTATGCTGCTGCCTGAGTGAGGTGAGGAAAGAGTGCACCTCAGTGGCATGGGGGGTCAGAGAGGTGAGGTTCCAGGCTGGCTTTCCTCCTCATTTCCTGCCATGTTCCTCTGATCCC-------------------CTCCAGGCAAG-----------CAG i calJac3.chr2 I 1436 I 11 s saiBol1.JH378167 188232 467 + 13147851 ACTCTCCCTCTTACCAAGTTGGAATCCCTAGCTACTTTTCAGAAGAGCAGAGTGTGTACCCCAATCCCAGCTTAGTATGGTTCACATCTGCATTTAACTCATAAAACCTGGCTGCTC-CCCATGCCCTGGAAAAAAAAAAAAAAAAGGTCTCTCTGTGGTGGGT----------ATGGGACTGTCCCCATTCAGGAGGGACCTGCCCAGACTCAGTGAGAAGGAAGCCCAATTTCCCACCAGGTTGGCAGGGCTAGGAAAAGGAATGTGTTATAGTAGCCCCAAGACCAAAAAGAGGCAGCAGAGAGAGCAGAACAGTACTCCCATGGAACTCATGCTGCTGCCTGAGTGAGATGGGGAAAGAGTGCACCCCAGTGACATGAGGGGGCAGAAAGGTGAGGTTCCAAGCTGGCTTTTCACTTCACTTCCTGCCATGTTCCTCTGATCTC---CAGGTGAGACTGCCCACTTTGGGCCTA-----------GGG i saiBol1.JH378167 C 0 I 11 s aotNan1.NW_018487315v1 6223742 476 - 15679484 ACTCTCCCTCTCACCAAGTTGGAATCCCTAGCTACTTTTCAGAAGAGCAGAGTGTGTACCCCAATCCCAGCTTGGTATGGTTCACATCTGCATTTAACTCATAAAATCTGGCTGCTC-CCCAGGCCCTAG--AGAAAAAAAAAAAAGGTCTCTCTGTGGGGGGTATCATTCAGGATGGGACTGTCCCCATTCAGGATGGGCCTGCGCTGACCCTATGAGAAGGAAGCCCAATTTCCCACCGGGTTGGCAGGGCTAGGAAAAGGAACGTGTTATAGTAGCCCCAAGACCAAAAAGAGGCAGCAGAGAGAGCAGGACAGCACTCGCATGGAACTCATGCTGCTGCCTGAGTGAGGTGAGGAAAGAGTGCACC-CAGTGACATGGAGGG-CAGGGAGGTGAGGTTCCAGGCTGGCTTTCCTCCTCACTTCCTGCCATGTTCCTCTGATCCCCTCCAGGTGAGCCTGCCCACTTTGGGCCCA-----------GGG i aotNan1.NW_018487315v1 C 0 I 37 e colAng1.NW_012116633v1 817486 344 + 1536524 I e manLeu1.NW_012100344v1 78091 2570 - 148006 M e chlSab2.chr21 124177233 1997 - 127223203 I e macNem1.NW_012013022v1 9025731 0 - 10413719 C e panPan2.chr7 56735359 33229 + 162613886 I a score=49780.000000 s hg38.chr3_KI270784v1_alt 51606 22 + 184404 GCCTGTAGAAAACCACAG-CTCC s panTro5.chr1 222335318 22 + 228573443 GCCTGTAGAAAACCACAG-CTCC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 41916 22 - 1329735 GCCTGTAGAAAACCACAG-CTCC i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46825760 22 - 99891981 GCCTGTAGAAAACCACAG-CTCC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55131568 22 + 185818997 GCCTGTAGAAAAACACAG-CACC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127723945 22 - 192294377 GCCTGTAGAAAAACACAG-CACC i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 66298 22 - 113584 GCCTGTAGCCAAACACAG-CTCC i cerAty1.NW_012005081v1 C 0 C 0 s calJac3.chr2 1464158 22 + 204313951 GCCTGTACCCAAACGCAG-CCCC i calJac3.chr2 I 11 C 0 s saiBol1.JH378167 188710 23 + 13147851 GCCCGTACCCAAATGCAGCCCCC i saiBol1.JH378167 I 11 C 0 e aotNan1.NW_018487315v1 6224218 37 - 15679484 I e colAng1.NW_012116633v1 817486 344 + 1536524 I e manLeu1.NW_012100344v1 78091 2570 - 148006 M e chlSab2.chr21 124177233 1997 - 127223203 I e macNem1.NW_012013022v1 9025731 0 - 10413719 C e panPan2.chr7 56735359 33229 + 162613886 I a score=796787.000000 s hg38.chr3_KI270784v1_alt 51628 241 + 184404 CCATGGTTATGGCCCCAGGAGTGGGGCAGAGCAGGGAGGAGTCCTGCACAGAGGAGAGGCAGGGGCAGGAGGGAGTGGGCCTCAAACTCCAGGA-GGGGGCCCTTCTCATGGGTCCTGCTTTCTGGCTTCTCCTTCCTTACCCCTGGGCTGATCACTTGGGGAAGAACTGAGACAAAGTTTCTCACCCTCAGGCCCAAAGGGTTTAATTACtgggcccttagggaggtg---tgagccccctgaa s panTro5.chr1 222335340 241 + 228573443 CCATGGTTATGGCCCCAGGAGTGgggcagggcagggaggagtcctggacagaggagaggcaggggcaggAGGGAGTGGGCCTCAAACTCCAGGA-GGGGGCCCTTCTCATGGGTCCTGCTTTCTGGCTTCTCCTTCCTTACCCCTCGGCTGATCACTCGGGGAAGAACTGAGACAAAGTTTCTCACCGTCAGGCCCAAAGGGTTTAATTACtgggcccttagggaggtg---tgagccccctgaa i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 41938 240 - 1329735 CCATGGTTATGGCCCCAGGAGTGGGGCAGAGCAGGGAGGAGTCCTGG-CAGAGGAGAGGCAGGGGCAGGAGGGAGTGGGCCTCAAACTCCAGGA-GGGGGCCCTTCTCATGGGTCCTGCTTTCTGGCTTCTCCTTCCTTACCCCTGGGCTGATCACTCGGGGAAGAACTGAGACAAAGTTTCTCACCCTCAGGCCCAAAGGGTTTAATTACtgggcccttagggaggtg---tgagccccctgaa i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46825782 238 - 99891981 CCATGGTTATGGCCCCAGGAGTGGggcagagcagggaggagtcctggacagag--gaggcaggggcaggagggagTGGGCCTCAAACTCCAGGA-GGGGGTCCTTCTCATGGTTCCTCCTTTTTGGTTTTTTCTTCCTTA-CCCTGGGCTGATCACCCGAAGAAGAACTGAGGCAAGGTTTCTCACCCTCAGGTCCGAGGGGTTCAATTACCCGGCCCTTAGCGAGTTG---TGAGCCCCCTGAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55131590 242 + 185818997 AAATGGTTATGGCCCCAGGAGTGGGGCACAGCAGGGAGGAGTCGTGGACAGAGGACAGGCAGGGG-AGGAGGGAGTGGGCCTCAAACTCCAGGA-GGGGGCCCTTCTCATGGGTCCTCCTTTTTGGCTTCTCCTTCTTTA-CCCTGGGCTGATCACCCAGGGAAGAACTGAAGcaaggtttctcaccctcaggtccaagggattcaactaccgggcccttagggaggtgtgatgagccccctgaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127723967 242 - 192294377 AAATGGTTATGGCCCCAGGAGTGGGGCACAGCAGGGAGGAGTCGTGGACAGAGGACAGGCAGGGG-AGGAGGGAGTGGGCCTCAAACTCCAGGA-GGGGGCCCTTCTCATGGGTCCTCCTTTTTGGCTTCTCCTTCTTTA-CCCTGGGCTGATCACCCAGGGAAGAACTGAAGCAAGGTTTCTCACCCTCAGGTCCAAGGGATTCAACTACCGGGCCCTTAGGGAGGTGTGATGAGCCCCCTGAA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 66320 241 - 113584 CGATGGTTATGGCCCCAAGAGTGGGGCAGAGCAGGGAGTAGTCCCGGACAGAGGAGAGGCAGGGGCAGGAGGGAGTGGGACTCAAACTGCAGGA-GGGGGTCCTTCTCATGGGTCCTGCTTTTGGGCTTCTCCTTCTTTACCCCTGGGTTGATCACTCGGGGAAGAAATGAGATAAGGTTTCTCACCATCAGGCCCAAGGGGTTTAATTACGGggcccttagggaggtg---tgagccccctgaa i cerAty1.NW_012005081v1 C 0 C 0 s calJac3.chr2 1464180 238 + 204313951 CGATGGCCATGGCCCCAGGAGC--GGCGCAGCAGGGAAGAGTCCCGGACAGAGGAGAGGCAGGCC-AGGAAACAGT-GGCCTCTGACTCCAGGAGGGGGGCCCTGCTCATGGATCCTGCTTTCTGGCCTCTTCTCCCTTACTCCTGGGCTGATCACCTGGGGAAGAACTGAGGCAAGGTTTCTCACCCTCAGGTCTGAGGGGTTCAATTACCAAGCccttagggaggtg---tgagccccctgaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 188733 239 + 13147851 CCATGGCCATGGCCCCAGGAGC--GGCAGAGCAGGGAAGAGTCCTGGACAGAGGAGAGGCAGGGC-AGAAAAGAGTGGGCCTCTAACTCCAGGAGGGGGGCCCTGCTCATGGGTCCGGCTTTCTGGCCTCTTCTCCCTTACTCCTGGACTGATCACCTGGGGAAGAAGTGAGGCAAGGTTTCTCACCCTCAGGTCTGAGGGGCTCAATTACCGAGCccttagggaggtg---tgagccccctgaa i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6224255 239 - 15679484 CCATGGCCATGGTCCCGGGAGA--GGCAGAGCAGGGAAGAGTCCTGGACAGAGGAGAGGCAGGGC-AGGAAAGAGTGGGCCTCTAACTCCAGGAGGGGGGCCCTGCTCATGGGTCCTGCTTTCTGGCCTCTTCTCCCTTACTCCTGGGCTGATCACCTAGGGAAGAACTGAGGTAAGGTTTCTCACCCTCAGGTCTGAGGGGTTCAATTTCCgagctcttagggaggtg---tgagccccgtgaa i aotNan1.NW_018487315v1 I 37 C 0 e colAng1.NW_012116633v1 817486 344 + 1536524 I e manLeu1.NW_012100344v1 78091 2570 - 148006 M e chlSab2.chr21 124177233 1997 - 127223203 I e macNem1.NW_012013022v1 9025731 0 - 10413719 C e panPan2.chr7 56735359 33229 + 162613886 I a score=16983.000000 s hg38.chr3_KI270784v1_alt 51869 7 + 184404 aggatgc s panTro5.chr1 222335581 7 + 228573443 aggatgc i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 42178 6 - 1329735 aggatg- i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46826020 7 - 99891981 AGGATGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55131832 7 + 185818997 aggatgc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127724209 7 - 192294377 AGGATGC i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 66561 7 - 113584 aggatgc i cerAty1.NW_012005081v1 C 0 C 0 s calJac3.chr2 1464418 7 + 204313951 atgatgc i calJac3.chr2 C 0 C 0 s aotNan1.NW_018487315v1 6224494 7 - 15679484 atgatgc i aotNan1.NW_018487315v1 C 0 C 0 e saiBol1.JH378167 188972 0 + 13147851 C e colAng1.NW_012116633v1 817486 344 + 1536524 I e manLeu1.NW_012100344v1 78091 2570 - 148006 M e chlSab2.chr21 124177233 1997 - 127223203 I e macNem1.NW_012013022v1 9025731 0 - 10413719 C e panPan2.chr7 56735359 33229 + 162613886 I a score=222399.000000 s hg38.chr3_KI270784v1_alt 51876 142 + 184404 aagg-------ttttgttt-----tgttttgtttttt-gagacagagtttcgctcctgtcgcccaggctggagtgcagtggtgtgatctcaccacactacaacctgcgcctcccaggttcaagtgattctcctgcctcagcctctggagta-gctg s panTro5.chr1 222335588 142 + 228573443 aagg-------ttttgttt-----tgttttgtttttt-gagacagagtttcgctcctgtcgcccaggctggagtgcagtggcgtgatctcaccacactacaacctgtgcctcccaggttcaagtgattctcctgcctcagcctccggagta-gctg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 42184 142 - 1329735 aagg-------ttttgttt-----tgttttgtttttt-gagacagagtttcgctcctgtcgcccaggctggagtgcagtggcgtgatctcaccacactacaacctgcgcctcccaggttcaagtgattctcctgcctcagcctctggagta-gctg i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46826027 148 - 99891981 AAGG-------tttttttttttggttttttgttttttggagacggagtttcactcttgtcacctaggctggagtacagtggtgcgatctcacctcactgcaacctccacctcccaggttcaagtgattctcctgcctcagcctccagagta-gcca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55131839 154 + 185818997 aagggttttgtttttgttt--ttgttttttgttttttggagatggagtttcgctcttgtcaccaaggctggagtgcagtggtgcaatctcacctcactgcaacctctgccccccgggttcaagtgaatctcctgcctcagcctccagagtaggctg i rheMac8.chr3 C 0 I 20 s macFas5.chr3 127724216 154 - 192294377 AAGgtttttgtttttgttt--ttgttttttgttttttggagatggagtttcgctcttgtcaccaaggctggagtgcagtggtgcaatctcacctcactgcaacctctgccccccgggttcaagtgaatctcctgcctcagcctccagagtaggctg i macFas5.chr3 C 0 I 9 s cerAty1.NW_012005081v1 66568 142 - 113584 aagg-------ttttgttt-----tgttttgtttttt-gagacggagtttcgcttctatcacccaggttggagtacagtggtgcaatcttaccacactgcaacctccacctcccgggttcaagtaattctcctgcctcagcctccagagta-gctg i cerAty1.NW_012005081v1 C 0 C 0 e aotNan1.NW_018487315v1 6224501 0 - 15679484 C e calJac3.chr2 1464425 0 + 204313951 C e saiBol1.JH378167 188972 0 + 13147851 C e colAng1.NW_012116633v1 817486 344 + 1536524 I e manLeu1.NW_012100344v1 78091 2570 - 148006 M e chlSab2.chr21 124177233 1997 - 127223203 I e macNem1.NW_012013022v1 9025731 0 - 10413719 C e panPan2.chr7 56735359 33229 + 162613886 I a score=5975.000000 s hg38.chr3_KI270784v1_alt 52018 6 + 184404 ggatta s panTro5.chr1 222335730 6 + 228573443 ggatta i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 42326 6 - 1329735 ggatta i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46826175 6 - 99891981 ggatta i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127724379 6 - 192294377 aggcca i macFas5.chr3 I 9 I 5 s cerAty1.NW_012005081v1 66710 6 - 113584 ggatta i cerAty1.NW_012005081v1 C 0 C 0 e aotNan1.NW_018487315v1 6224501 0 - 15679484 C e calJac3.chr2 1464425 0 + 204313951 C e saiBol1.JH378167 188972 0 + 13147851 C e colAng1.NW_012116633v1 817486 344 + 1536524 I e rheMac8.chr3 55131993 20 + 185818997 I e manLeu1.NW_012100344v1 78091 2570 - 148006 M e chlSab2.chr21 124177233 1997 - 127223203 I e macNem1.NW_012013022v1 9025731 0 - 10413719 C e panPan2.chr7 56735359 33229 + 162613886 I a score=-49.000000 s hg38.chr3_KI270784v1_alt 52024 1 + 184404 c s panTro5.chr1 222335736 1 + 228573443 c i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 42332 1 - 1329735 c i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46826181 1 - 99891981 c i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55132013 1 + 185818997 a i rheMac8.chr3 I 20 C 0 s macFas5.chr3 127724390 1 - 192294377 a i macFas5.chr3 I 5 C 0 s cerAty1.NW_012005081v1 66716 1 - 113584 c i cerAty1.NW_012005081v1 C 0 C 0 e aotNan1.NW_018487315v1 6224501 0 - 15679484 C e calJac3.chr2 1464425 0 + 204313951 C e saiBol1.JH378167 188972 0 + 13147851 C e colAng1.NW_012116633v1 817486 344 + 1536524 I e manLeu1.NW_012100344v1 78091 2570 - 148006 M e chlSab2.chr21 124177233 1997 - 127223203 I e macNem1.NW_012013022v1 9025731 0 - 10413719 C e panPan2.chr7 56735359 33229 + 162613886 I a score=326632.000000 s hg38.chr3_KI270784v1_alt 52025 156 + 184404 aggtggctgccaccacgcctggctaattttttgtatttttagtagagacagggtttcgccatgttgggcaggctggtcttgaactcctgacctcaggtgatccgactggctccgcctcccaaagttctgggatcaca-----tcagccactgtgcttggcc s panTro5.chr1 222335737 156 + 228573443 aggtggctgccaccacgcctggctaattttttgtatttttagtagagacagggtttcgccatgttgggcaggctggtcttgaactcctgacctcaggtgatccgactggctccgcctcccaaagttctaggattaca-----tgaggcactgtgcttggcc i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 42333 155 - 1329735 aggtggctgccaccacacctggctaattttttgtattttta-tagagacagggtttcgccatgttgggcaggctggtcttgaactcctgacctcaggtgatccgactggctccgcctcccaaagttctgggattaca-----tgagccactgtgcttggcc i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46826182 157 - 99891981 aggtggcccccaccacatctgac----tttttgtatttttagtagagatggggtttctccatgtcgggcaggctggtcttgaactcctgacctcaggtgatccaaccggctcagcctcccaaagttctgggattacaggtgttgagccactgcacttggcc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55132014 155 + 185818997 aggtggccgccaccacgc----ctaattttttgcatttttagtagagatgaggtttcgccatgttgggcacgctggtctcgaactcctgacctcaggtgatccgaccagctcggcctcccaaagttctgggattataggcg-tga-ccactgcgcttggcc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127724391 155 - 192294377 aggtggccaccaccacgc----ctaattttttgcatttttagtagagatgaggtttcgccatgttgggcacgctggtctcgaactcctgacctcaggtgatccgaccagctcggcctcccaaagttctgggattacaggcg-tga-ccactgcgcttggcc i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 66717 157 - 113584 aggtggctgccaccatgcctggctaattttttgtagttttagtagagacagggttt---catactgggcaggctggtctcgaactcctgacctcaggtgatccaaccggcttcgcctcccaaagttctgggaccataggcg-tgagtcactgcgctcgacc i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124179230 156 - 127223203 aggtggccgccaccacgc----ctaattttttgcatttttagtagagatggggtttcgccatgttgggcacgctggtctcgaactcctgacctcaggtgatccgaccggctcggcctcccaaagttctgggattacaggcg-tgagccactgcgcttggcc i chlSab2.chr21 I 1997 C 0 e aotNan1.NW_018487315v1 6224501 0 - 15679484 C e calJac3.chr2 1464425 0 + 204313951 C e saiBol1.JH378167 188972 0 + 13147851 C e colAng1.NW_012116633v1 817486 344 + 1536524 I e manLeu1.NW_012100344v1 78091 2570 - 148006 M e macNem1.NW_012013022v1 9025731 0 - 10413719 C e panPan2.chr7 56735359 33229 + 162613886 I a score=17515.000000 s hg38.chr3_KI270784v1_alt 52181 7 + 184404 acgatga s panTro5.chr1 222335893 7 + 228573443 acgatga i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 42488 7 - 1329735 acgatga i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46826339 7 - 99891981 ATGATGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55132169 7 + 185818997 acaatgc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127724546 7 - 192294377 ACAATGC i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 66874 7 - 113584 acagtgc i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124179386 7 - 127223203 ACAATGC i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 817830 7 + 1536524 acgatgc i colAng1.NW_012116633v1 I 344 C 0 s saiBol1.JH378167 188972 7 + 13147851 atgataa i saiBol1.JH378167 C 0 C 0 e aotNan1.NW_018487315v1 6224501 0 - 15679484 C e calJac3.chr2 1464425 0 + 204313951 C e manLeu1.NW_012100344v1 78091 2570 - 148006 M e macNem1.NW_012013022v1 9025731 0 - 10413719 C e panPan2.chr7 56735359 33229 + 162613886 I a score=869848.000000 s hg38.chr3_KI270784v1_alt 52188 178 + 184404 aaggttttgtgtggagagcatgtacatgcctttctgggaaaacagtccacagctcttattctcagcaggcttcacggtgaaaaaaggttagaacTCTTGCTACAGAGCTGTGGAAGCAGCCAGGTGAGGGGCCTGCCAAGGGCACTCTGGGCACTACCTGGGCACTCTCGAGCCCATC s panTro5.chr1 222335900 178 + 228573443 aaggttttgagtggagagcatgtacatgcctttctgggaaaacagtccacagctcttattctcagcaggcttcacggtcaaaaaaggttaTAACTCTTGCTACAGAGCTGTGGAAGCAGCCAGGTGAGGGGCCTGCCAAGGGCACTCTGGGCACTACCTGGGCACTCTCAAGCCCATC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 42495 177 - 1329735 aaggttttgtgtgg-gagcatgtacatgcctttctgggaaaacagtccacagctcttattctcagcaggcttcacggtcaaaaaaggttagaacTCTTGCTACAGAGCTGTGGAAGCAGCTAGGTGAGGGGCCTGCCAAGGGCACTCTGGGCACTACCTGGGCACTCCCGAGCCCATC i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46826346 178 - 99891981 AAGGTTTTGCATGGAGAGCATGTACATGCCTTTCTGGGAAAACAGTCCACAGCTCTTATTCTCGGCAGGCTCCACAGTCAAAAAGGGTTAGAATTCTTGCTACAGAGCTGCGGGAGCGGCTAGGTGAGGGGCCTGCCAAGGGCATTCCGGAGACTACCTGGGCACCCCTGAGCCCACT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55132176 173 + 185818997 aaggttttgcatggagagcatgtacatgcctttct-ggaaaacagtccacagct--tattctcagcaggctccacagtcaaaaaaggttagaacTCTTGCTACAGAGCTGTGGGAGCACCTAGGTGAGGGGCCTGCCAAGGGCATTCTAGGGACTACCTGGGCA--CCCGAGCCCACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127724553 173 - 192294377 AAGGTTTTGCATGGAGAGCATGTACATGCCTTTCT-GGAAAACAGTCCACAGCT--TATTCTCAGCAGGCTCCACAGTCAAAAAAGGTTAGAACTCTTGCTACAGAGCTGTGGGAGCACCTAGGTGAGGGGCCTGCCAAGGGCATTCTAGGGACTACCTGGGCA--CCCGAGCCCACT i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 66881 176 - 113584 aaggttttgtgtggacagcgtgtacatgcctttctgggaaaacagtgcacagctcctattctcagcaggctc--cagtcaaaaaaggttagaacTCTTGCTACAGAGCTGTGAGAGCAGCTAGGTGAGGGGCCTGGCAAGGGCACTCTGGGGACGACCTGGGTACTCCTGAGCCCACT i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124179393 175 - 127223203 AAGGTTTTGCATGGACAGCATGTACATGCCTTTCT-GGAAAACAGTCCACAGCT--TATTCTCAGCAGGCTCCACAGTCAAAAAAGGTTAGAACTCTTGCTACAGAGCTGTGGGAGCACCTAGGTGAGGAGCCTGCCAAGGGCATTCTGGGGACTACCTGGGCACCCCTGAGCCCACT i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 817837 174 + 1536524 aaggttttgtgtggagagcgtgcacatgtgtttctgggaaaatggtccacagct--ctttctcagcaggctccata--caaaaacggttagaacTCTTGCTACAGAGCTGTGGGAGCAGCTAGGTGAGGGGCCTGCCAAGGGCACTCTGGGGACTACCTGGGCAGTCTTGAGCCCACC i colAng1.NW_012116633v1 C 0 I 24 s calJac3.chr2 1464425 178 + 204313951 aaggttttgtgtgaagagtgtgcacatgcatttctgggaaaatggtccacagctctcatttttgtcaggctccatattcaaaaaaggttagaacTCTTGCTACAGAGCTGTGGAAGCAGCTAGGTGAGGGACCTGCCAAGGGTGCTCTGGGGACTAGCTGGACACTCCTGAGCCCACT i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 188979 178 + 13147851 aaggttttgtgtggagagtgtgcatatgcgtttctgggaaaacggtccacagctctcatttttcacaggctccatattcaaaaaaggttaGAATTCTTGCTACAAAGCAGTGGAAGCAGCTAGGTGAGGGGCCTGCCAAGGGTGCTCTGGAGACGACCTGGGCCCTCCTGAGCCCACT i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6224501 178 - 15679484 aaggttttgtgtggagagtgtgcacatgcatttctgggaaaacggtccacagctctcatttttggcaggctcaatattcaaaaaaggttagaacTCTTGCTACAGAGTTGTGGAAGCAGCTAGGTGAGGGGCCTGCCAAGGGTGCTCTGGGGAGTACCTGGGCACTCCTGAGCCCACT i aotNan1.NW_018487315v1 C 0 C 0 e manLeu1.NW_012100344v1 78091 2570 - 148006 M e macNem1.NW_012013022v1 9025731 0 - 10413719 C e panPan2.chr7 56735359 33229 + 162613886 I a score=16473.000000 s hg38.chr3_KI270784v1_alt 52366 4 + 184404 ATCC s panTro5.chr1 222336078 4 + 228573443 ATCC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 42672 4 - 1329735 ATCC i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46826524 4 - 99891981 GTCC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55132349 4 + 185818997 GTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127724726 4 - 192294377 GTCC i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 67057 4 - 113584 ATCC i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124179568 4 - 127223203 GTCC i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1464603 4 + 204313951 GTCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 189157 4 + 13147851 GTCC i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6224679 4 - 15679484 GTTC i aotNan1.NW_018487315v1 C 0 C 0 e colAng1.NW_012116633v1 818011 24 + 1536524 I e manLeu1.NW_012100344v1 78091 2570 - 148006 M e macNem1.NW_012013022v1 9025731 0 - 10413719 C e panPan2.chr7 56735359 33229 + 162613886 I a score=1520067.000000 s hg38.chr3_KI270784v1_alt 52370 294 + 184404 CCTAGGCAGGCTGCACTGCTTGGTATTTGCAGAGCTGAGGGGGTGGGGCATGTGGGGACTGTGAAATCGCCCTGAGATGACCCACAGTCCTCAGCTAGGAAGTGAGCGCTGCATCTCCTGCAGCGTCCTCCATCCCTAGAGCCATGGGGCCAGGAGAACCGGCCCTTGCAGCAAGTGAAAAGCCTATTATTGATTCCCTCCCTAGCCATGTAGACAG-TGAACC-ACGACACTCATATCAGGTAAATGCCTTGTTCTCTGTTACCAAGGTAACCAGTAGGCATTCCCAGATACAGC s panTro5.chr1 222336082 294 + 228573443 CCTAGGCAGGCTGCACTGCTTGGTATTTGCAGAGCTGAGGGGGTGGGGCATGTGGGGACTGTGAAATCGCCCTGAGATGACCCACAGTCCTCAGCTGGGAAGTGAGCGGTGCATCTCCTGCAGCGTCCTCCATCCCTAGAGCCATGGGGCCAGGAGAACTGGCCCTTGCAGCAAGTGAAAAGCCTATTATTGACTCCCTCCCTAGCCATGTAGACAG-TGAACC-AAGACACTCATATCAGGTAAATGCCTTGTTCTCTGTTACCGAGGTAACCAGTAGGCATTCCCAGATACAGT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 42676 293 - 1329735 CCTAGGCAGGCTGCACTGCTTGGTATTTGCAGAGCTGAGGGGGTGGGGCATGTGGGGACTGTGAAAT-GCCCTGAGATGACCCACAGTCCTCAGCTGGGAAGTGAGCAGTGCATCTCCTGCAGCGTCCTCCATCCCTAGAGCCATGGGGCCAGGAGAACTGGCCCTAGCAGCAAGTGAAAAGCCTATTATTGATTCCCTCCCTAGCCATGTAGACAG-TGAACC-AAGACACTCATATCAGGTAAATGCCTTGTTCTCTGTTACCAAGGTAACCAGTAGGCATTCCCAGATACAGT i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46826528 294 - 99891981 CCTAGGCAGGCTGCGCTGCTTGTTATTTGCAGAGCTGAGGGGGTGGGGCATGTGGGAACCGTGAAATTGCCCTGAGATGACCCACAGTCCTCAGCTGGGAAGTGAGGGGTGCATCTCCTGCAGCGTCCTCCATCCCTAAAGCCATGGGGCCAAGAGAATTGGCCCTAGTAGCAAGTGAAAAGCCTATTACTGGCTCCCTCCTTGGCCATACAGACAG-TGAACC-ACGGTACTCGTATCAAGTAAATGCCTTGGTCTCTGTCACCGAGGTGACCAGTAGGCATTCCCAGGTACAGT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55132353 294 + 185818997 CCTAGGCAGGCTGCACTGCTTGGTATTTGCAGAGCTGAGGGGGTGGGGCACGTGGGGACTGTGAAATTGCCCTGAGATGACCCACAGTCCTCAGCTGGGAAGCGAGGGGTACATCTCCTGCAGCATCCTCCATCCCTAGA-CCATGGGGCCAGGAGAACTGATCCTTTCAGCAAGTCAAAAGCCTATTACTGACTTCTTCCCTGGCCATGTAGACAGTTGAACC-AGGGCAGTCATATCAAGTAAATGCCTTGGTCTCTGTCACCCAGGTGACCAGTAGGCATTCCCAGGTGCAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127724730 294 - 192294377 CCTAGGCAGGCTGTACTGCTTGGTATTTGCAGAGCTGAGGGGGTGGGGCATGTGGGGACTGTGAAATTGCCCTGAGATGACCCACAGTCCTCAGCTGGGAAGCGAGGGGTACATCTCCTGCAGCATCCTCCATCCCTAGA-CCATGGGGCCAGGAGAACTGATCCTTTCAGCAAGTCAAAAGCCTATTACTGACTTCTTCCCTGGCCATGTAGACAGTTGAACC-AGGGCAGTCATATCAAGTAAATGTCTTGGTCTCTGTCACCGAGGTGACCAGTAGGCATTCCCAGGTGCAGT i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 67061 293 - 113584 CCTAGGCAGGCTGCGCTGCTTGGTATTTGCAGAGCTG-GGGGGTCGGGCACGTGGGGACTGTGAAATTGCCCTGAGATGACCCACAGTTCTCAGCTGGGAAGGGAGGGGTGTGTCTTCTGCAGTGTCCTCCATCCCTAGAGCCATGGGGCCAGGAGAACTGGTCCTTGCAGCAAGTCAAAAGTCTATTATTGACTCCCTCCCTGGCCATGTAGACAG-TGAACC-AGGGCACTCATATCAAGTAAATGCCTTGGTCCCTGTCACCGAGGTGACCAGTAGGCATTCCCAGGTGCAGT i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124179572 293 - 127223203 CCTAGGCAGGCTGCGCTGCTTGGTATTTGCAGAGCTGAGGGGGTGGGGCACGTGGGGACTGTGAAATTGCCCTGAGATGACCCACAGTCCTCAGCTGGGAAGGGAGGGGTGCATCTCCTGCAGCATCCTCCATCCCTAGA-CCANGGGGCCAGGAGAACTGATCCTTTCAGCAAGTCAAAAGCCTATTACTGACTTCTTCCCTGGCCATGTAGACAG-TGAACC-AGGGCAGTCATATCAAGTAAATGCCTTGGTCTCTGTCACCGAGGTGACCAGTAGGCATTCTCAGGTGCAGT i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 818035 295 + 1536524 CCTAGGCAGGCTGTGCTGCTTGGCATTTGCAGAGCTGAGGGGATGGGGCATGCAGGGACTGTGAAATTGCCCTGAGATGACCCACAGTCCTCAGCTGGGAAGTGAGGGGTGTGTATCCTGCAGCATCCTCTATCCCTAGGGCCATGGGGCCAGGAGAACTGGTCCTTGCAGCAAGTCAAAAGCCTATTACTGATTTCTTCCCTGGCCATGTAGACAG-TGAACCAAAGGCACTCATATCAAGTAAATGCCTTGGTCTCTGTGACCGAGGTGGCCAGTAGGCATTCCCAGGTGCAGG i colAng1.NW_012116633v1 I 24 C 0 s calJac3.chr2 1464607 292 + 204313951 CCTAGGTAGGCTGTGCTGCTTGGTATTTGCAGAGGTAACAGGGTGGGGCGTGCAGGGACTGTGAAATTGCCCTGAGATGACTCACAGGCCTCAGCTGGGACGTGAGGCGTACAT---CTGCAGCATCCTCCATCCCTAGAGCCATGGGGCCAGGAGAACTAGCCCTTGCAGTAAGTGAAAAGCCTATTATTGACTCCCTCCCTGGCCATGCAGACAG-TGAACCAAGGGCACTCATATCAAGTAAATGTCTTGGTCTCTGTGACCGAGGTGACCAGTAGGCATTCCCAGGTGCAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 189161 291 + 13147851 CCTAGGGAGGCTGTGCTGCTTGGTATTTGCAGAGGTAACGGGGTGGGGCATGCAGGGAC--TGACATTGCCC--AGATGACCCACAGGCCTCAGCTGGGAGGTGAGGGGTGCATCTCCTGCAGCATCCTCCCTCCCTAGAGCCATGGTGCCAGGAGAACTGGCCCTGGTAGTAAGTGAAAAGCCTATAATTGACTCCCTCCCTGGCCACGCAGACAG-TGAACCAAGGGCACTCATATCAAGTAAATGCCTTGGTCACTGTGACCAAGGTGACCAGTAGGCATTCCCAGGTGCAGG i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6224683 295 - 15679484 CCTAGGTAGGCTGTGCTGCTTGGTATTTGCAGAGGTAACGGGGTGGGGCATGCAGGGACTGTGAAATTGCCCTGAGATGACCCACAGGCCTCAGCTGGGAAGTTAGGGGTGCATCTCCTGCAGCATCCTCCATCCCTAGAGCCATGGGGCCAGGAGAAATAGCCCTTGCAGCAGGTGAAAAGCCTATAATTGACTCCCTCCCTGGCCACGCAGACAG-TGAACCAAGGGCACTCATATCAAGTAAATGCCTTGGTCTCTGTGACTGAGGTGACCAGTAGGCATTCCCAGGTGCAGG i aotNan1.NW_018487315v1 C 0 C 0 e manLeu1.NW_012100344v1 78091 2570 - 148006 M e macNem1.NW_012013022v1 9025731 0 - 10413719 C e panPan2.chr7 56735359 33229 + 162613886 I a score=1757039.000000 s hg38.chr3_KI270784v1_alt 52664 279 + 184404 GAAGGTCCTCACACCAAGACATGCACCTGGCCACCTGAGGAAAGAGAAAGGACTATCTGAGGGGATGGGGCTGAGCTGGGTGTGGAGTGGTCCTTGTGGGTCTTGGAGAGTGGGAGGGGGAGCAGCATGAGCCAGGCCTCGAGGCAGAAGGACAACCAGGAGACAGCCT-GGAAAAAGTGCTGGACCCACAAGGGCTCAAGGCTGGCCAGAG-GGGAGGTGGGATAGGCTGTAAAGTCCTGAGGTCTGAAGATTGGCCCTGGCAGGAAGAAACCAGGTAAG s panTro5.chr1 222336376 279 + 228573443 GAAGGTCCTCACACCAAGATATGCACCTGGCCACCTGAGGAAAGAGAAAGGACTATCTGAGGGGATGGGGCTGAGCTGGGTGTGGAGTGGTCCTTGTGGGTCTTGGAGAGTGGGAGGGGGAGCAGCATGAGCCAGGCCTCGAGGCAGAAGGACAACCAGGAGACAGCCT-GGAAAAAGTGCTGGACCCACAAGGGCTCAAGGCTGGCCAGAG-GGGAGGTGGGATAGGCTGCAAAGTCCTGAGGTCTGAAGATTGGCCCTGGCAGGAAGAAACCAGGTAAG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 42969 278 - 1329735 GAAGGTCCTCACACCAAGATATGCACCTGGCCACCTGAGGAAAGAGAAAGGACTATCTGAGGGGATGGGGCTGAGCTGGGTGTGGAGTGGTCCTTGTGGGTCTTGGAGAGTGGGAGGGGGAGCAGCATGAGCCAGGCCTCGAGGCAGAAGGACAACCAGGAGACAGCCT-GGAAAAAGTGCTGGACCCACAAGGGCTCAAGGCT-GCCAGAG-GGGAGGTGGGATAGGCTGCAAAGTCCTGAGGTCTGAAGATTGGCCCTGGCAGGAAGAAACCAGGTAAG i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46826822 279 - 99891981 GAAGGT-CTCACACCAAGATATGCACCTGGCCACCTGAGGAAAGAGAAAGGACTATCCAAGGGGATGGGGCTGAGCTGGGTGTGGAGTGGTCCTTGTGGGTCTTGGTGAGTGGGAGGGGGAGCAGCATGAGCCAGGCCTCAAGGCAGAAGGACAACCAGGAGACAACCT-GGAAAATGTGCTGGACCCACAAGGGCTCAAGGCTGGCTAGAGAGGGAGGTGGGATAGGCTGGAAAGTCCTGAGGTCTGAAGATTGGCCCTGGCAGGAAGAAACCAGGTAAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55132647 280 + 185818997 GAAGGTCCTGACACCAAGATATGCACCTGGCCACCTGAGGAAAGAGAAAGGACTATCCAAGGGGATGGGGCTGAGCTGGGTGTGGAGTGGTCCTTGTGGGTCTTGGTGAGTGGGAGGGGGAGCAGCATGATCCAGACCTTGAGGCAGAAGGACAACCAGGAGACAGCCT-GGAAAATGTGCTGGACCCACAAGGGCTCAAGGCTGGCCAGAGAGGGAGGTGGGATAGGCTGGAAAGTCCTGAGGTCTGAAGATTGGCCCTGGCAGAAAGAAGCCAGGTAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127725024 280 - 192294377 GAAGGTCCTGACACCAAGATATGCACCTGGCCACCTGAGGAAAGAGAAAAGACTATCCAAGGGGATGGGGCTGAGCTGGGTGTGGAGTGGTCCTTGTGGGTCTTGGTGAGTGGGAGGGGGAGCAGCATGATCCAGACCTTGAGGCAGAAGGACAACCAGGAGACAGCCT-GGAAAATGTGCTGGACCCACAAGGGCTCAAGGCTGGCCAGAGAGGGAGGTGGGATAGGCTGGAAAGTCCTGAGGTCTGAAGATTGGCCCTGGCAGAAAGAAGCCAGGTAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9025731 277 - 10413719 GAAGGTCCTGACACCAACATATGCACCTGGTCACCTGAGGAAAGAGAAAGGACTATCCAAGGGGATGGGGCTGAGCTGGGTGTGGAGTGGTCCTTATGGGTCTTGGTGAGCAGGATGGGGAGGAGCATGAGCCAGGCCTCAGGGC---AGGACAACCAGGAGACGGCCT-GGAAAAAGTGCTGGACCCACGAGGCTTCAAGGCTGGCCAGAGAGGGAGGCAGGATAGGCTGGGAAGTCCCGAGGTCTGAAGATTGGCCCTGGCAGGCAGAAACCAGGTAAG i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 67354 280 - 113584 GAAGGTCCTGACACCAAGATATGCACCTGGTCACCTGAGGAAAGAGAAAGGACTATCCGAGGGGATGGGGCAGAGCTGGGTGTGGAGTGGACCTTGTGGGTCTTGGTGAGTGGGAGGGGGAGCAGCATGAGCCAGGCCTTGAGGCAGAAGGACAACCAGGAGACAGCCT-GGAAAATGTGCTGGACCCACAAGGGCTCAAGGCTGGCCAGAGGGGGAGGTGGGATAGCCTGTAAAGTCTTGAGGTCTTAAGATTGGCCCTGGCAGGAAGAAACCAGGTAAG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124179865 280 - 127223203 GAAGGTCCTGACACCAAGATATGCACCTGGCCACCTGAGGAAAGAGAAAGGACTATCCAAGGGGATGGGGCTGAGCTGGGTGTGGAGTGGTCCTTGTGGGTCTTGGTGAGTGGGAGGGGGAGCAGCATGAGCCAGACCTTGAGGCAGAAGGACAACCAGGAGAGAGCCT-GGAAAATGTGCTGGAGCCACAAGGGCTCAAGGCTGGCCAGAGAGGGAGGTGGGATAGGCTGGAAAGTCCTGAGGTCTGAAGATTGGCCCTGGCAGAAAGAAGCCAGGTAAG i chlSab2.chr21 C 0 C 0 s colAng1.NW_012116633v1 818330 277 + 1536524 GAAGGTCCTGACACCAACATATGCACCTGGTCACCTGAGGAAAGAGAAAGGACTATCTAAGGGGATGGGGCTGAGCTGGGTGTGGAGTGGTCCTTATGGGTCTTGGTGAGCAGGACGGGGAGCAGCATGAGCCAGGCCTCAGGGC---AGGACAACCAGGAGATGGCCT-GGAAAAAGTGCTGAACCCACAAGGCTTCAAGGCTGTACAGAGAGGGAGGCGGGATAGGCTGGGAAGTCCCGAGGTCTGAAGATTGGCCCTGGCAGGCAGAAACTAGGTAAG i colAng1.NW_012116633v1 C 0 I 37 s calJac3.chr2 1464899 280 + 204313951 GAACCTCCTGACACTAAGTTATGCACCTGGTCACCTGAGGAAAGAGAAAGGACTATCCGAGGGGATGGGGCTGAGCTGGGTGTGGAGTAGTCCTTGTGGGTCTCGGTGAGTGGGAGGGGGAGCAGCATGACCCAGGCCTCGTGGCAAAAGGACAACCAGGAGACAGTCT-GGAAAAAGTGCTGAACCCATGAGGGTTCAAGGCTGGCCAGAGAGGAAGGTGGGGTCGACTGGGAAGTTCCAAGGTCTGAAGATGGGCCCTGGAAGGCAGAAACCAGTTACG i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 189452 277 + 13147851 GAATCTCCTGACACCAAAATATGCACCTGGTAACCTGAGGAAAGAAAAAGGACTATCCGATGGGATGGGGCTGAGCTGGGTGT---GTGGTCCTTGTGGGTCTTGGTGAGTGGGAGGGGGAGCAGCATGACCCAGGCCTCGCAGCAAAAGGACAACCAGGAGACAGTCT-GGAAAAAGTGCTGGATCCACGAGGGTTCAAGGCTGGCCAGAGAGGGAGGTGGGGTAGACTGGGAAGTTCTGAGGTCTGAAGAGGGGCACTGGAAGGCAGAAACCAGTTAAG i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6224978 281 - 15679484 GAACCTCCTGACACCAAGATATGCACCTGGTCACCTGAGGAAAGAGAAAGGATTATCCGAGGGGATTGAGCTGAGCTGGGTGTGGAGTGATCCTTGTGGGTCTTGGTGAGTGGGAGGGATAGCAGCATGACCCAGGCCTCATGACAAAAGGACAACCAGGAGACAGTCTGGGAAAAAGTGCTGGACCTACAAGGGTTCAAGGCTGGCCAGAGAGGGAAGTGGGGTAGATTGGGAAGTTCCAAGGTCTGACGATGGGCCCTGGAAGGCAGAAACCAGGTAAG i aotNan1.NW_018487315v1 C 0 C 0 e manLeu1.NW_012100344v1 78091 2570 - 148006 M e panPan2.chr7 56735359 33229 + 162613886 I a score=32454.000000 s hg38.chr3_KI270784v1_alt 52943 5 + 184404 GTGGG s panTro5.chr1 222336655 5 + 228573443 GTGGG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 43247 5 - 1329735 GTGGG i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46827101 5 - 99891981 GTGGG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55132927 5 + 185818997 GTGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127725304 5 - 192294377 GTGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9026008 5 - 10413719 ATGGG i macNem1.NW_012013022v1 C 0 I 32 s cerAty1.NW_012005081v1 67634 5 - 113584 GTGGG i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124180145 5 - 127223203 GTGGG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 80661 5 - 148006 GTGGG i manLeu1.NW_012100344v1 M 2570 C 0 s calJac3.chr2 1465179 5 + 204313951 GTGGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 189729 5 + 13147851 GTGCA i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6225259 5 - 15679484 GTGGG i aotNan1.NW_018487315v1 C 0 C 0 e colAng1.NW_012116633v1 818607 37 + 1536524 I e panPan2.chr7 56735359 33229 + 162613886 I a score=145160.000000 s hg38.chr3_KI270784v1_alt 52948 30 + 184404 GTGTTA-------CCTACACCCTCAGGGCCAGATGCA s panTro5.chr1 222336660 30 + 228573443 GTGTTA-------CCTACACCCTCGGGGCCAGATGCA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 43252 30 - 1329735 GTGTTA-------CCTACACCCTCGGGGCCAGATGCA i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46827106 30 - 99891981 GTGTTA-------CCTACACCCTGGGGGCCAGATGCA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55132932 30 + 185818997 GTGTTA-------CCCGCACCCTGGGGGCCAAGTGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127725309 30 - 192294377 GTGTTA-------CCCGCACCCTGGGGGCCAAGTGCA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 67639 37 - 113584 GTGTTACCTCTACCCTGTACCCTGGGGGCCAGGTGCA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124180150 30 - 127223203 GTGTTA-------CCTGCACCCTGGGGGCCAAGTGCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 80666 30 - 148006 GTGTTA-------CCTGCACCCTGGGGGCCAAGTGCA i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1465184 30 + 204313951 CAGTCA-------CCCGCACCCTGGGGGCCAGATGCA i calJac3.chr2 C 0 I 1 s saiBol1.JH378167 189734 30 + 13147851 TAGTTA-------CCTGCACCCTGGGGGCCAGGTGCA i saiBol1.JH378167 C 0 I 1 s aotNan1.NW_018487315v1 6225264 30 - 15679484 CAGTTA-------CCTGCATCCTGGGGGCCAGGTGCA i aotNan1.NW_018487315v1 C 0 I 6 e colAng1.NW_012116633v1 818607 37 + 1536524 I e macNem1.NW_012013022v1 9026013 32 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=281863.000000 s hg38.chr3_KI270784v1_alt 52978 115 + 184404 GGCCAGAGCCAGCCAATTACCAGGCCCTTAGGGAGGTGTGAGCCCCTTGAAATGATGCAAG---------------GttttttgtttttgttttggagacggagtttcgctcttgtcacacaggctggCA s panTro5.chr1 222336690 115 + 228573443 GGCCAGAGCCAGCCAATTACCAGGCCCTTAGGGAGGTGTGAGCCCCTTGAAATGACTCAAG---------------GttttttgtttttgttttggagacggagtttcgctcttgtcgcacaggctggaA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 43282 114 - 1329735 GGCCAGAGCCAGCCAATTACCAGGCCCTTA-GGAGGTGTGAGCCCCTTGAAATGATGCAAG---------------CttttttgtttttgttttggagacggagtttcgctcttgtcgcacaggctggCA i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46827136 110 - 99891981 GACCAGATCAGGCCAATTACCGGGCCCTTAGGGAGGTGTGAGCCCCCTGAAGTGATGGAAG---------------GGt-----ttttttttttggagacagagctttgctcttgtcgcacaggctggCA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55132962 112 + 185818997 GGCCAGATCAGGCCAATTACCGGGCCCTTAGAGAGATGTGAGCCCCTTGAAATAGTGGAAG------------------ttttttttttttttttgagacggagtttcgctcttctcgcacaggctggCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127725339 112 - 192294377 GGCCAGATCAGGCCAACTACCGGGCCCTTAGAGAAATGTGAGCCCCTTGAAATAGTGGAAG------------------ttttttttttttttttgagacggagtttcgctcttctcgcacaggctggCA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 67676 130 - 113584 GGCCAGAGCAGGCCAATTACCAGGCCCTTAGGGAGGTGTGAGCCCCCTGAAATGATGCAAGGTGTttttgttttgttttgttttgttttgttttTGAAGCAGAGTTTTGCTCTTGTCATACAGGTTGGCA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124180180 109 - 127223203 GGCCAGATCAGGCCAATTACCAGGCCCTTAGGGAGATGTGAGCCCCTTGAAATGGTGGAAG---------------------GttttttttttttgagacggaatttcactcctcttgcacaggctggCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 80696 110 - 148006 GGCCAGATCAGGCCAATTACCGGGCCCTTAGGGAGATGTGAGCCCCTTGAAATGGTGGAAG--------------------ttttttttttttttgagacggagtttcgctcttctcgcacaggctggCA i manLeu1.NW_012100344v1 C 0 C 0 e aotNan1.NW_018487315v1 6225294 6 - 15679484 I e calJac3.chr2 1465214 1 + 204313951 I e saiBol1.JH378167 189764 1 + 13147851 I e colAng1.NW_012116633v1 818607 37 + 1536524 I e macNem1.NW_012013022v1 9026013 32 - 10413719 I e panPan2.chr7 56735359 33229 + 162613886 I a score=27918.000000 s hg38.chr3_KI270784v1_alt 53093 5 + 184404 CCTTT s panTro5.chr1 222336805 5 + 228573443 CCTTT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 43396 5 - 1329735 CCTTT i gorGor5.CYUI01015648v1 C 0 C 0 s nomLeu3.chr17 46827246 5 - 99891981 CCTTG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55133074 5 + 185818997 CCTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127725451 5 - 192294377 CCTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9026045 5 - 10413719 CCTTA i macNem1.NW_012013022v1 I 32 C 0 s cerAty1.NW_012005081v1 67806 5 - 113584 CCTTT i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124180289 5 - 127223203 CCTTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 80806 5 - 148006 CCTTT i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 818644 5 + 1536524 CCTTA i colAng1.NW_012116633v1 I 37 C 0 s calJac3.chr2 1465215 5 + 204313951 CCTTA i calJac3.chr2 I 1 C 0 s saiBol1.JH378167 189765 5 + 13147851 CCTTA i saiBol1.JH378167 I 1 C 0 e aotNan1.NW_018487315v1 6225294 6 - 15679484 I e panPan2.chr7 56735359 33229 + 162613886 I a score=4577375.000000 s hg38.chr3_KI270784v1_alt 53098 670 + 184404 GCCCAGAGCAGGCACCAAGACTTCTGGCTCTGGGTGT-GACCTCAGTCTGGGTAAAAGCCCCAGCCCCCACCAGCACCACCTACCCCCTAGACTACTTCAGGTGCTGAGCCCAAGCCAGGGGCAGGAAGCTAAACTGATGCCTAGGGTAATCCCAACAAAGTCCCTGGTTCCCCGC-AGCTATGGGGCTGACGGGGAATTACAGCCCAAA-CCCCAGATGCTGGCTCTCAAACTAACACTGAGCCCTCAGTGCCCAcagggagatacaatcagcgcactttccagatggggaaatgggatcagagaagtgcaacagccttgcccaatgccccagaccagGGCTCCAGGCCCAGAGTGTTCTTTTGTCACTGTGTTCAGAGGGCAGCAGCTGCTGTGATGTACCCACCTGAGCCTGGCAGCTTTCTCCAACTTTGGAAGCCCAGGAGCATGGCCCCTGTCCACAGATGCACCTGGCATGAGGCGTGCCCAGAGGGACAGAGGCAGATGAGTTTCGTCTCCTCCACTGGATTGTGAGGGCCTAGAAGCAGACAAGGGTCAGCTTGAGAA--------------------------GGCAGTGAACAGCGAGCAGCCTGAGGCAGTGCCCCTCTGGATGGATGCGCAGTGCCTGGATGGAACCTGGCTCAGACAGAGCTCAGTTCTGCAGGTC-CCTG-AGGCA s panTro5.chr1 222336810 670 + 228573443 GCCCAGAGCAGGCACCAAGACTTCTGGCTCTGGGTGT-GACCTCAGTCTGGGTAAAAGCCCCAGCCCCCACCAGGACCACCTACCCCTTAGACTACTTCAGGTGCTGAGCCCAAGCCAGGGGCAGGAAGCTAAACTGATGCCTAGGGTAATCCCAACAAAGTCCCTGGTTCCCCGC-AGCTATGGGGCTGACGGGGAATTACAGCCCAAA-CCCCAGATGCTGGCTCTCAAACTAACAGTGAGCCCTCAGTGCCCACAGGGAGATACAATCAGCGcactttccagatggggaaatgggatcagagaagtacaacagccttgcccaatgccccagaccagggcTCCAGGCCCAGAGTGTTCTTTTGTCACTGTGTTCAGAGGGCAGCAGCTGTTGTGATGTACCCACCTGAGCCTGGCAGCTTTCTCCAACTTTGGAAGCCCAGGAGCATGGCCCCTGTCCACAGATGCACCTGGCATGAGGCGTGCCCAGAGGGACAGAGGCAGATGAGTTTCgtctcctccactggattgtgagggcctagaaggAGACGAGGGTCTGCTTGGGAA--------------------------GGCAGTGAATAGCGAGCAGCCTGAGGCAGTGCCCCTCTGGATGGATGCGCAGTGCCTGGATGGAACCTGGCTCAGACAGAGCTCAGTTCTGCAGGTC-CCTG-AGGCA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015648v1 43401 668 - 1329735 GCCCAGAGCAGGCACCAAGACTTCTGGCTCTGGGTGT-GACCTCAGTCTGGGTAAAAGCCCCAGCCCCCACCAGGACCACCTACCCCCTAGACTACTTCAGGTGCTGAGCCCAAGCCAGGGGCAGGAAGCTAAACTGATGCCTAGGGCAATCCCAACAAAGTCCCTGGTTCCCCGC-AGCTATGGGGCTGACGGGGAATTACAGCCCAAA-CCCCAGATGCTGGCTCTCAAACTAACACTGAGCCCTCAGTGCCCACAGGGAGATACAATCAGCGCAC-ttccagatggggaaatgggatcagagaagtgcaacagccttgcccaatgccccagaccagGGCTCCAGGCCCAGAGTGTTCTTTTGTCACTGTGTTCAGAGGGCAGCAGCTGCTGTGATGTATCCACCTGAGCCTGGCAGCTTTCTCCAACTTTGGAAGCCCAGGAGCATGGCCCCTGTCCACAGATGCACCTGGCATGAGGCGTGCCCAGAGGGACAGAGGCAGATGAGTTTCGTCGCCTCCACTGGATTGTGAGGGCCTAGAAGGAGACAAGGGTCTGCTTGAGAA--------------------------GGCAGTGAATAGCGAGCAACCTGAGGCAGTG-CCCTCTGGATGGATGCGCAGTGCCTGGATGGAAACTGGCTCAGACAGAGCTCAGTTCTGCAGGTC-CCTG-AGGCA i gorGor5.CYUI01015648v1 C 0 N 0 s nomLeu3.chr17 46827251 670 - 99891981 GCCCAGAGCAGGCACCAAGATTTCTGGCTCTGGGTGTGGACCTCAGTGTGGGGAAAAGCCCCAACCCCCACCAGGACCACCTGCCCCCTAGACTGCTTCAGATGCTGAGCCCAAGCCAGGGGCAGGAAGCTAGACTGATGCCTAGGGT-ATCCCGACAAAGTCCCTGGTTCCCCCC-AGCTATGGGGCTGAAGGGGAATTACAGCCCAAA-CCCCAGATACTGGCTCTCAAACTAACACTGAACCCTTAGTGCCCAcagggagatacaatcagcgcactttccagatggggaaatgggctcagagaagtgcaacagccttgcccaatgccccaGACCAGGGCTCCAGGCCCAGAGTGTTCTTTTATCACTGTGTCCAGAGGGCAGCAGCTGCTGTGATGTACCCACTTGAGCCTGGCAGCTTTCTCCAACTTTGGAAGCCCAGGAGCATGGCCCCTGTCCACAGATGCACCCGGCATGAGATGCGCCCAGAGGGACAGAGGCAGATGAGTTTCGTCTCCTCCACTGGGTTGTGAGGGCCTAGAAGGAGACAAGGGTCTGCCTGAGAA--------------------------GGCAGTGAATAGTGAGCAACCTGGGGCGGTTTCCATCTGGATGGATCCGCAGTACCTGGATGGAACCCTGCTCAGACAGAGCTCAGTTCTGCAAGTC-CCTG-AGGCA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55133079 652 + 185818997 GCCCAGAGCAGGCACCAACATTTCTGGCTCTGGGTGT-GACCTCAGAGTGGGGAAAATCCCCAACCCCCACCAGGACCACCTGCCGCCTAGACTACTTCAGATGCTGAGCCCAAGCCAGGGGCAGGAAGCTAGAATGACACCTAGGTTAATCCTGACAAAGTCCCTGGCTACCCCC-AGCTACAGGGCTGAAGGGGAATTACAGCCCAAA-CCCCGGAAGCTGACTCT----CTAACACTGAGCCCTCAGTGCCCACAGGGAGATAGAATCAGCACACTATCCAGATGGGGAAATGGGCTCCGAGAAGTGCAAGAGCCTTGCCCGATGCCCCAGACCAGGGCTCCAGGCCCAGAGTATTCTTTTGTCACTGTGTCCAGAGGGCAGCAGCTGCTCTAATGTACCTACCTGAGCCTGGCAACCTTCTCCAACTTCGGAAGCCCAGGAGCATGGCCCATGTCCACTGATGCACTTGGCATGAGACGCAACCAGAGGGATGGAGGCAGATGAGTTTCACCTCCTCCACTGGATTGTGAGGGCCTAGAAGGAGACAAGGCTCTGCTTGAGAA--------------------------GACAGTGGATA--------------GTGGTTTCCCTCTGGATGGATCTCCAGTGCCTGGATGGGACCTGGCTCAGACAGAGCACAGTTCTGCAGGTC-CCTG-AGGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127725456 652 - 192294377 GCCCAGAGCAGGCACCAACATTTCTGGCTCTGGGTGT-GACCTCAGAGTGGGGAAAATCCCCAACCCCCACCAGGACCACCTGCCGCCTAGACTACTTCAGATGCTGAGCCCAAGACAGGGGCAGGAAGCTAGAATGACACCTAGGTTAATCCTGACAAAGTCCCTGGCTACCCCC-AGCTACAGGGCTGAAGGGGAATTACAGCCCAAA-CCCCGGAAGCTGACTCT----CTAACACTGAGCCCTCAGTGCCCACAGGGAGATAGAATCAGCACACTATCCAGATGGGGAAATGGGCTCCGAGAAGTGCAAGAGCCTTGCCCGATGCCCCAGACCAGGGCTCCAGGCCCAGAGTATTCTTTTGTCACTGTGTCCAGAGGGCAGCAGCTGCTCTAATGTACCTACCTGAGCCTGGCAACCTTCTCCAACTTCGGAAGCCCAGGAGCATGGCCCATGTCCACTGATGCACTTGGCATGAGACGCGACCAGAGGGATGGAGGCAGATGAGTTTCACCTCCTCCACTGGATTGTGAGGGCCTAGAAGGAGACAAGGCTCTGCTTGAGAA--------------------------GACAGTGGATA--------------GTGGTTTCCCTCTGGATGGATCTCCAGTGCCTGGATGGGACCTGGCTCAGACAGAGCACAGTTCTGCAGGTC-CCTG-AGGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9026050 668 - 10413719 GCCCAGAGCAGGCGCCAAGATTTCTGGCTCTGGGTGT-GACTTCAGTCTGGGGAAAAGCCCCAACCCCCACCAGGACCACCTGCCCCCCAGAGTACTTCAGATGCTAAGCCCAAG-CAGGGGCAGGAAGCTGGAGTGATGCCTGGGGT-ATCCCAACAAAGTCCCT-GCTACCCCCAAGCTATGGGGCTAAAGGGGGATTACAGTCCAAA-CCCCACATGCTGGCTCTCAAACTAACACTGAGCCCTCAGTGCCcaaagggagattcaatcagcacactttccagatgggaaaatgacctcagagaagtggaagagccttgcccaatgccccagaccagggctcta-gcccagagtgttcttttgtcactgtgtccagAGGGCAGCAGCTACTCTGATGTACCCACCTAAGCCTGGCAACTTTCTCCAACTTTGGAAGCCCAGGAGCATGGCCTGTGTCCACAGATGCACCTGGCATGAGGCGTACCCAGAGAGACAGAGGCAGATGAGTTTCGCTTTCTCCACTGGATTGTGACGGCCTCCAAGGAGACAAAGATCTGCTTGTGAA--------------------------GGCAGCGGACAGTGAGCAACTGGGGGTGGTTTAACTCTAGATGGATCTGCAGTGCCTGGATGGAACCTGGCTCAGACAGAGCTCAGTTCTGCAGGTC-ACTGCAGGCA i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 67811 668 - 113584 GCCCAGAGCAGGTACCATGATTTCTGGCTCTGGGTGT-GACCTCAGTCTGGGGAAAAGCCCCAATCCTCACCAGGACCATCTGCCACCTAGACTACTTCAGATGCTGAGCCCAAGCCAGGGGCAGGAAGCTGGCCTGATGCTTGGGGT-ATCCCGACAAAGTCCCTGGTTCCCCCC-AGCTATGGGGCTGAAGGGGAATTATAGCCCAAA-CCCCAGATGTTGGTTCTCAAACTAACACTGAGCCCTCAGTGCCCACagggagatagaatcagcacacttttcagatggggaaatgg-ctcagagaagtgcaagagccttgcccaatgccccagaccagggcTCCAGGCCCAGAGTGTTCTTTTGTCACTGTGTCCAGAGGGCAGCAGCTGCTCTGATGTACCCACCTGAGCCTGACAGCTTTCTCCAACTTTGGAAGCCCAGGAGCATGGCCCAGGTCCACAGATGCACCTGGCATGAGGTGCGCCCAGAGGGACAGAGGCAGATGAGTTTCGTCTCCTCCACTGGAATGTGAGGGCCTAGAAGGAGACAAGGGTCTGCTTGAGAA--------------------------GGCACTGAATAGTGAACAACTTGGGGCGGTTTCCCTCTGGATGGGTCTGCAGTGCCTGGATGGAACCTGGCTCAGACAGAGCTCAGTTCTGCAGGTC-CCTG-AGGCA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124180294 652 - 127223203 GCCCAGAGCAGGCACCAACATTTCTGGCTCTGGGTGT-GACCTCAGAGTGGGGAAAAGCCCCAACCCCCACCAGGACCACCTGCCGCCTAGACTACTTCAGATGCTGAGCCCAAGCCAGGGGCAGGAAGCTAGAATGACACCTAGGTTAATCCTGACAAAGTCCCTGGCTCCCCCC-AGCTATGGGGCTGAAGGGGAATTACAGCCCAAA-CCCCAGATGCTGACTCT----CTAACACTGAGCCCTCAGTGCCCACAGGGAGATAGAATCAGCACACTATCCAGATGGGGAAATGGGCTCCAAGAAGTGCAAGAGCCTTGCCCGATGCCCCAGACCAGGGCTCCAGGCCCAGAGTATTCTTTTGTCACTGTGTCCAGAGGGCAGCAGCTGCTCTGAGGTACCCACCTGAGCCTGGCAGCTTTCTCCAACTTCGGAAGCCCAGGAGCATGGCCCATGTCCACTGATGCACCTGGCATGAGCCGCGACCAGAGGGACGGAGGCAGATGAGTTTCACCTCCTCCACTGGATTGTGAGGGCCTAGAAGGAGACAAGGCTCTGCTTGAGAA--------------------------GACAGTAGATA--------------GTGGTTTCCCTCTGGATGGATCTCCAATGCCTGGATGGGACCTGGCTCAGACAGAGCACAGTTCTGCAGGTC-CCTG-AGGCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 80811 652 - 148006 GCCCAGAGCAGGCACCAACATTTCTGGCTCTGGGTGT-GACCTCAGAGTGGGGAAAATCCCCAACCCCCACCAGGACCACCTGCCGCCTAGACTACTTCAGATGCTGAGCCCAAGCCAGGGGCAGGAAGCTAGAATGACACCTAGGTTAATCCTGACAAAGTCCCTGGCTCCCCCC-AGCTACGGGGCTGACGGGGAATTACAGCCCAAA-CCCCAGATGCTGACTCT----CCAACACTGAGCCCTCAGTGCCCACagggagatagaatcagcacactatccagatggggaaatgggctcagagaagtgcaagagccttgcccgacgccccagaccagggctccaggcacagaGTATTCTTTTGTCACTGTGTCCAGAGGGCAGCAGCTGCTCTAATGTACCTACCTGAGCCTGGCAACCTTCTCCAACTTCGGAAGCCCAGGAGCATGGCCCATGTCCACTGATGCACTTGGCATGAGGCGCGACCAGAGGGACGGAGGCAGATGAGTTTCACCTCCTCCACTGGATTGTGAGGGCCTAGAAGGAGACAAGGCTCTGCTTGAGAA--------------------------GACAGTGGACA--------------GTGGTTTCCCTCTGGATGGATCTCCAATGCCTGGATGGGACCTGGCTCAGACAGAGCACAGTTCTGCAGGTC-CCTG-AGGCA i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 818649 669 + 1536524 GCCCAGAGTAGGCACCAAGATTTCTGGCTCTGGGTGT-GACCTCAGAGTGGGGAAAAGCCCCAACCCCCATCAGGACCACCTGCCCCCCAGAGTACTTCAGATGCTGAGCCCAAG-CAGGGGCAGGAAGCTGGACTGATGCCTGGGGT-ATCCCAACAAAGTCCCTGCTTCCCCCA-AGCTATGGGGCTAAAGGGGGATTACAGCCCAAA-CCCCATATGCTGGCTCTCAGACTAACACTGAGCCCTCAGTGCCCAAAGGGAGAttcaatcagcacactttccagatgggaaaatgacctcagagaagtgcaagagccttgcccaatgccccaGACCAGGGCTCTAGGCCCAGAGTGTTCTTTTGTCACTGTGTCCAGAGGGCAGCAGCTGCTCTAATGTACCCACCTGAGCCTGGCAACTTTCTCCAACTTTGGAAGCCCAGTAGCATGGCCCATGTCCACAGATGCACCTGGCATGAGGCGCACCCAGAGGGACAGAGGCACATGAGTTTCACTTCCTCCACTGGATTGTGAGGGCCTCCAAGGAGACAAAGATCTGCTTGTGAA--------------------------GGCAGCGGACAGTGAGCAACCTGGGGTGGTTTAACTCTAGATGGATCTGCAGTGCCTAGATGGGACCTGTCTCAGACAGAGCTCAGTTCTGCAGGTCACTTG-AGGCA i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1465220 687 + 204313951 GCCCAGAGCAAACACCAAGATTTCTGGCACTGGGTGT-GACCTCAGTTTGGGGAGAAGCCCCAAGCCCCACCAGGACCACCTGCCCCTCAGACTACTTCAGATAATGAGCCGAAGCCAGGGGCAGGAAGCTAGACTGATGCCTACGGCGATCCCAACAAAGTCCCTGGTTCTCCCC-AGCTATGGGGCTGAAGGGGAATTACAGCCCAAACCCCCAGATGCTGGCTCTGAAACTAACCCTGAGCTCTCAGTGCCCGTAGGGAGATACAATCAGCACGCTTTCCAGATAGAGAAATGGGCTCAGAGAAGTGCAAGAGCCTTAACCCATTCCCCAGACCAGGG-TCCAGGCCCAGAGTATTCTTTTGTCACTGTGTCCACAGGGCAGCAGGTGCTCTGATGTATCCATCTGAGCCTGGTGACTTTCTCCAACTTTGGAAGCCCAGGAGCATGACCCATGTCCACAGATGTACCTGGCATGAAGCACGCCCA--------GAGGCAGATGAGTtttgcctcctccactggattgtgagagcctcgaaggggacaaggatcTGCATGAGAAAGCCCTTGAGAC-ATCCCACAAAGCTGGCAGCAGACAGTGAGCAATCTGGGACAGTTTCCCTCTGGATGGATCCACAGTGCCTGGATGGGACCTGGCTCAGACAGAGGTCAGTTCTGCaggtc-actg-aggca i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 189770 685 + 13147851 GCCCAGAGCAGACACCAAGATTTCTGGCTCTGGGCAT-GACCTCAGTTTGGGGAGAAGTCCCAAGCCCCACCAGGACCACCTGCCCCTCAGACTGCTTCAGATGCTGAGCCCAAGCCAGGGGTAGGAAGTTAGACTGATGCCTAGGGCAATCGTGACAAAGTCCCTGGTTTTCCCC-AGCTATGGGGCTGAAGGAGAATTATAGCCCAAACCCCCAGATGCTGGCTCTGAAACTAACACTGGGCCCTCAGTGCCCACAGGGAGATGCAATCAGCACACTTTCCAGATGGAGAAATGGGCTCAGAGCAGTCT--GAACCTTAACCCATTCCCCAGACCAGGG-TCCAGGCCCAGACTATTCTTTTGTCACTGTGTCCACAGGGCAGCAGGTGCTCTGGTGTACCCACCGGAGCCTGGTGACTTTCTCCAACTTTGGAAGCCCAGGAGCATGACCCACGTCCACAGATGTACCTGGCATGAGGCACGCCCA--------GAGGCAGATGAGTtttgcctcctccactggatcgtgagagcctcaaaggggacaaggatcTGCATGAGAAAGCCCTTGAGAC-GTCGCACAAAGCTGGCAGCAGACAGTGGGCAACCTGGGGCAGTTTCCCTCTGGATGGATCCACAGTGCCTGGATGGGACCTGGCTCAGACAGAGCTCAGTTCTGCAGGTC-ACTG-AGGCA i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6225300 686 - 15679484 GCCCAGAGCAGGCACCAAGATTTCTGGCACTGGGTGT-GACCTCAGTTTGGGGAGAAGCCCCAAGCCCCACCAGGACCACCTGCCCCTCAGCCTACTTCAGATGCTGAGCCCAAGTCAGGAGCAGGAAGCTAGACTGATGCCTAGGGCAATCCTGACAAAGTCCCTGGTTCTCCCC-AGCTATGGGGCTGAAGGGGAATTATAGCCCAAACCCCCAGATGCTGGCTCTGAAACTAACACT-AGCCCTCAGTGTCCACAGGGAGATACAATCAGCACGCTTTCCAGATGGAGAAATAGGCTCAGAGAAGTACAAGAAACTTAACGCATTCCCTAGACCAGGG-TCCAGGCCCAGAGTATTCTTTTGTCACTGTGTCCACAGGGCAGCAGGTGCTCTGATGTACCCACCTGAGCCTGGTGACTTTCTCCAACTTTGGAAGCCCAGGAGCATGACCCATGTCCACAGATGTACCTGGCATGAGGCAC-CCCA--------GAGGCAGATGAGTTTTGCCTCCTCCACTGTATTGTGAGAGTTTTGAAGGGGACAAGGATCTGCATGAGAAAGCCCTTGAGACAATCACACAAAGCTGGCAGCAGACAGTGAGCAACCTGGGACAGTTTCCCTCTGCATGGATCCACAGTGCCTGGATGGGACCTGGCTCAGACAGAGCTCAGTTCTGCAGGTC-ACTG-AAGCA i aotNan1.NW_018487315v1 I 6 C 0 e panPan2.chr7 56735359 33229 + 162613886 I a score=631919.000000 s hg38.chr3_KI270784v1_alt 53768 89 + 184404 TGGAGAGTTcacagctaccaagtgtaggagtctggattcaaagccaatggcgtcactccaaagtccctgccctagcccctgga------------------ccaccc s panTro5.chr1 222337480 89 + 228573443 TGGAGAGTTcacagctaccaagcgtaggagtctggattcaaagccaacggcgtgactccaaagtccctgccctagcccctgga------------------ccaccc i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015140v1 6382872 89 - 8676498 TGGAGAGTTcacagctaccaagtgtaggagtctggattcaaagccaacggcgtgactccaaagtccctgccctagcccctgga------------------ccaccc i gorGor5.CYUI01015140v1 N 0 C 0 s nomLeu3.chr17 46827921 107 - 99891981 TGGAGaggtcacagttaccaagcgtaggagtctggattcaaagccaacagcgtgactccaaagtccctgccctatcccctggatcactcacctctcGGGAGCCACCC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55133731 107 + 185818997 CGGAGAGTTcacagctactaagtgtaggagtctaaattcaaagccaatagcgtgactccaaagtccctgccctagcccctggaccacccacctctcGGGATTCACCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127726108 107 - 192294377 CGGAGAGTTcacagctactaagtgtaggagtctaaattcaaagccaatagcgtgactccaaagtccctgccctagcccctggaccacccacctctcGGGATTCACCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9026718 106 - 10413719 CGGAaaggtcacagctaccaagtgtaggagtctggattcaaagccaacagcatgactccaaagtccctgccctagcccctggaccacccacctctc-GGAGTCACCC i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 68479 107 - 113584 TGGAGAGTTcacagctaccaagtgtaggagtctggattcaaagccaacagcgtgactccaaagtccctgccctagcccctggaccactcacttctcGGGATTCACCC i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124180946 107 - 127223203 CGGAGAGTTcacagctactaagtgtaggagtctaaattcaaagacaacagcgtgactccaaagtccctgccctagcccctggaccacccacctctTGGGATTCACCC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 81463 107 - 148006 CGGAGAGTTcacagctactaagtataggagtctaaattcaaagccaacagcatgactccaaagtccctgccctagcccctggaccacccacctctcGGGATTCACCC i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 819318 100 + 1536524 TGGAaaggtcacagctaccaagtataggag------ttcaaagccaacagcataactccaaagtctctgccctagcccctggaccacctacctctc-GGAGTCACCC i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1465907 94 + 204313951 tggagaggtcacagctaccaagtgtaggaatctgtattcaaggcccacagcatgactccaaagtccctggacca------------ctTACCTCTCAGAA-TCACCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 190455 89 + 13147851 TGGAGAGATcacagccaccaagtgtagaagtctggattcaaggccaacagtgtgactccaaagtccctgcccta-----------------gtccctgga-ccactc i saiBol1.JH378167 C 0 I 3 s aotNan1.NW_018487315v1 6225986 106 - 15679484 TGGAGaggtcacagctaccaagtgcaggagtctggattcaaggccaacagcgtgactccaaagtccctgccctagtccctggaccactcacctctcGGAA-TCACCC i aotNan1.NW_018487315v1 C 0 C 0 e panPan2.chr7 56735359 33229 + 162613886 I a score=1191683.000000 s hg38.chr3_KI270784v1_alt 53857 210 + 184404 tTGCAGGCCCATCAGATGCCCAGGCCAGCAGCACAG-CCGGCCAAGACCAGGGAAACTTGGGGAGCCTCAGAGCA-CCCCCAGGTATTCCAACCTAACCCTGGTGCCCC-GCCTCTCACCACCCTTCTTCCTGCTTTAACCTCAA-CCCTACACAAAGCCTGGGCCACTTAATGTGGCATCAAACAGACGCCTCAATAAATC---AGTCTAATCTCG----- s panTro5.chr1 222337569 211 + 228573443 tTGCAGGCCCATCAGATGCCCAGGCCAGCAGCACAG-CCGGCCAAGACCAGGGAAACTTGGGGAGCCTCAGAACA-CCCCCAGGTATTCCAACCTAACCCTGGTGCCCC-GCCTCTCACCACCCTTCTTCCTGCTTTAACCTCAACCCCTACACAAAGCCTGGGCCACTTAATGTGGCATCAAACAGATGCCTCAATAAATC---AGTCTAATCTCG----- i panTro5.chr1 C 0 I 4 s gorGor5.CYUI01015140v1 6382961 214 - 8676498 tTGCAGGCCCATCAGATGCCCAGGCCAGCAGCACAG-CCGGCCAAGACCAGGGAAACTTGGGGAGCCTCAGAGCA-CCCCCAGGTATTCCAACCTAATCCTGGTACCCCTGCCTCTCACCACCCTTCTTCCTGCTTTAACCTCAACCCCTACACAAAGCCTGGGCCACTTAATGTGGCATCAAACAGATGCCTCAATAAATC-AGAGTCTAATCTTG----- i gorGor5.CYUI01015140v1 C 0 I 2 s nomLeu3.chr17 46828028 211 - 99891981 TTGCAGGGTCATCAGATGCCCAGGCCAGCAGCACAG-CCAGCCAGGACCAAGGAAACTTGGGGAGCCTCAGAGCA--CCCCAGGTATTCCAACCTAATCCTGGCATACCTGCCTTTCACTACCCTTCTTCCTGCTTTCACCTCACCCCCTACACAGAGCCTGGGCCACCTAATGTGGCATCAAACAGATGCCTCAATAAATC---AGTCTAATTTTC----- i nomLeu3.chr17 C 0 I 7 s rheMac8.chr3 55133838 203 + 185818997 TTGCAGGCTCATCAGATGCCCAGGCCAGCAGCACAG-CCAGCCAGGACCAGGGAAACTTGAGAAGCCTCAGAGCA-CCCCCAAGTATTCCAATCTAATCCTGGCACCCCTGCCTCTCACCACCCttcttcctgttttaacctcaccgcctacacagagcctgggccactt------------aacagatgcctcaataaatCAAGAGTCTAATCTTC----- i rheMac8.chr3 C 0 I 10 s macFas5.chr3 127726215 203 - 192294377 TTGCAGGCTCATCAGATGCCCAGGCCAGCAGCACAG-CCAGCCAGGACCAGGGAAACTTGAGAAGCCTCAGAGCA-CCCCCAAGTATTCCAATCTAATCCTGGCACCCCTGCCTCTCACCACCCttcttcctgttttaacctcaccgcctacacagagcctgggccactt------------aacagatgcctcaataaatCAAGAGTCTAATCTTC----- i macFas5.chr3 C 0 I 9 s macNem1.NW_012013022v1 9026824 214 - 10413719 TTGCAAGCTCATCAGATGCTCAGGCCAGCAGCACAG-CTGGCCAGGGCAAGGGAAACCTGGGGAACCTCAGAGGA-CCCCTAGGTATTCCAACCTAATCCTGGCACCACTGCCCCTCACCATCCTTCTTCCTGCGTTAACCTTACCCCCTACACAGAGCCTGGGCCACTTAACTTGGCATCAAACAGATGCCTCAATAAATC-AGAGTCTGATCTTC----- i macNem1.NW_012013022v1 C 0 I 9 s cerAty1.NW_012005081v1 68586 214 - 113584 TTGCAGGCTCATCAGATGCCCAGGCCAGCAGCACAG-CCGGCCAGGACCAGGGAAACTTGGGGAGCCTCAGAGAA-CCCCCAGGTATTCCAATCTAATCCTGGCACCCCTGCCCCTCACTACCCTTCTTCCTGCTTTAACCTCAACCCCTACACAGAGCCCGGGCCACTTAACACGACATCAAACAGATGCCTCAATAAATC-AGAGTCTAATCTTC----- i cerAty1.NW_012005081v1 C 0 I 8 s chlSab2.chr21 124181053 201 - 127223203 TTGCAGGCTCATCAGATGCCCAGGCCAGCAGCACAG-CCGGCCAGGACCAAGGAAACTTGGGAAGCCTCAGAGTA-CCGCCAGGTATTCCAACCTAAACCTGGCA-CCCTGCCTCTCACCACCCttcttcctgttttaacctcaccgcctacacag-gcctgggccactt------------aacagatgcctcaataaatCAAGAGTCTAATCTTC----- i chlSab2.chr21 C 0 I 8 s manLeu1.NW_012100344v1 81570 203 - 148006 TTGCAGGCTCATCAGATGCCCAGGCCAGCAGCACAG-CCAGCCAGGACCAGGGAAACTTGAGAAGCCTCAGAGCA-CCCCCAAGTATTCCAATCTAATCCTGGCACCCCTGCCTCTCACCACCCttcttcttgctttaacctcaccgcctacacagagcctgggccactt------------aacagatgcctcaataaatCAAGAGTCTAATCTTC----- i manLeu1.NW_012100344v1 C 0 I 8 s colAng1.NW_012116633v1 819418 214 + 1536524 TTGCAAGCTCATCAGATGCTCAGGCCAGCAGCACAG-CTGGCCAGGGCCAGGGAAACTTGGGGAACCTCAGAGGA-CCCCTAGGTATTCCAAACTAATCCTGGCACCACTGCCCCTCACCATCCTTCTTCCTGCATTAACCTTACCCCTTACACAGAGCCTGGGCCACTTAACTTGGCATCAAACAGATGCCTCAATAAATC-AGAGTCTGATCTTC----- i colAng1.NW_012116633v1 C 0 I 8 s calJac3.chr2 1466001 219 + 204313951 TTGCAAGCTCATCAGATGCCCAGGCCAGCAACACAGACAAGCCAGGGCCAAAGAAATGTGGGAAGCCTTGGAACACCCCCCACGTATTCCAACTTAATCCTGGCACCCTTGCGCCTCGCCACCCTTCTTCCTGCTTCAACCTCACCCCCTACACAGAGCCTGGTCCActtaagttggcatcaattagatgccttgataaatc---agtctgatcttcttgag i calJac3.chr2 C 0 C 0 s aotNan1.NW_018487315v1 6226092 220 - 15679484 TTGCAAGCTCATCAGATGCCCAGACCAGCAACACAGACAAGCCAGGGCCAAAGAAATGTGGGAAGCCTTGGAACA-CCCCCAGGTATTCCAACTTAATCCTGGCACCCTTGCGCCTCACCACCCTTCTTCCTGCTTCAACCTCACCCCCTACATAGAGCCTGGTCCACTTAACTTGGCATCAATCAGATGCCTTGATAAATC-AGAGTCTGATCTTCTTGGG i aotNan1.NW_018487315v1 C 0 C 0 e saiBol1.JH378167 190544 3 + 13147851 I e panPan2.chr7 56735359 33229 + 162613886 I a score=762689.000000 s hg38.chr3_KI270784v1_alt 54067 110 + 184404 --AAAAAAAAAAGAC------TTAACAGATATACAATTGCACGTTAGAATGCTAAAGACCATAAACATAGAACAACTTAAAGTACATATAAATTCAACATATATCCAATCATTGTAAC s panTro5.chr1 222337784 110 + 228573443 --AAAAAAAAAAGAC------TTAACAGATATACAATTGCACGTTAGAATGCTAAAGACCATAAACATATAACAACTTAAAGTACATATAAATTCAATATATATCCAATCATTGTAAC i panTro5.chr1 I 4 C 0 s panPan2.chr7 56768588 110 + 162613886 --AAAAAAAAAAGAC------ATAAGAGATATACAGTTGCAAGTTAGAATGCTAAAGAACATAAACATAGAACAACTTAATGTACATATAAATTCAATATATATCCAATCATTGTGAC i panPan2.chr7 I 33229 C 0 s gorGor5.CYUI01015140v1 6383177 110 - 8676498 --AAAAAAAAAAGAC------TTAACAGATATACAATTGCACGTTAGAATGCTAAAGACCATAAACATATAACAACTTAAAGTACATATAAATTCAATATATATCCAATCATTGTGAC i gorGor5.CYUI01015140v1 I 2 C 0 s nomLeu3.chr17 46828246 115 - 99891981 --aaaaaaaaaaaacaaaaaaaaaaCAGATATACAGCTGCAAGTTATAATGCTAAAGAACATAAACATATAACAACTTAAAGTACATATAAA-TCAATAGATATCCAATCACTGTGAC i nomLeu3.chr17 I 7 C 0 s rheMac8.chr3 55134051 110 + 185818997 --AAAAAAAAAAGAC------TTGACAGATATATAGTTGCAAGTCAGAATGCTAAAGAATATAAACATATAACAAGTTAATGTACGTATAAATTCAATATACATCCAATCATTGTGAC i rheMac8.chr3 I 10 C 0 s macFas5.chr3 127726427 110 - 192294377 --AAAAAAAAAAGAC------TTGACAGATATATAGTTGCAAGTCAGAATGCTAAAGAATATAAACATATAACAAGTTAATGTACGTATAAATTCAATATACATCCAATCATTGTGAC i macFas5.chr3 I 9 C 0 s macNem1.NW_012013022v1 9027047 110 - 10413719 --AAAAAAAAAAGAC------TTAACAGATACACAATTGCAAGTTAGAATACTAAAGAACATAAACATACAACAACTTAATGAACATATAAATTCAATATATAGCCAATCATTGTAAC i macNem1.NW_012013022v1 I 9 C 0 s cerAty1.NW_012005081v1 68808 110 - 113584 --AAAAAAAAAATAC------TTCACATATATATAATTGCAAGTTAGAATGCTAAAGAACATAAACATATAACAACTTAAAGTACACATAAATTCAATATATATTCAATCATTTTGAC i cerAty1.NW_012005081v1 I 8 C 0 s chlSab2.chr21 124181262 110 - 127223203 --AAAAAAAAAAGAC------TTAACAGATATATAGTTGCAAGTCAGAATGCTAAAGAATATAAACATATAACAAGTTAATGTACATATAAGTTCAATATACATCCAATCATTGTGAC i chlSab2.chr21 I 8 C 0 s manLeu1.NW_012100344v1 81781 110 - 148006 --AAAAAAAAAAGAC------TTAACAGATATATAGTTGCAAGTCAGAATGCTAAAGAATATAAACATATAACAAGTTAATGTACATATAAATTCAATATACATCCAATCATTGTGAC i manLeu1.NW_012100344v1 I 8 C 0 s colAng1.NW_012116633v1 819640 110 + 1536524 --AAAAAAAAAAGAC------TTAACAGATATACAGTTGCAAGTTAGAATACTAAAGAACATAAACATACAACAACTTAATGAACATATAAATTCAATATATAGCCAATCATTGTAAC i colAng1.NW_012116633v1 I 8 C 0 s calJac3.chr2 1466220 112 + 204313951 gaaaaaaaaaaagac------tttaCAGATACACAGTTGCAAGTCAGAATGCTAAAGAACATAAACATATAACAACCTAATGTACATATACATTCATTATATAACCAATCATTGTGAC i calJac3.chr2 C 0 I 315 s aotNan1.NW_018487315v1 6226312 110 - 15679484 G--AAAAAAAAAGAC------TTTACAGATATACAGTTGCAAGTCAGAATGCTAAAGAACATAAACATATAACAACCTAATGTACATATAAATTCAATATATATCCAATCATTGTGAC i aotNan1.NW_018487315v1 C 0 C 0 e saiBol1.JH378167 190544 3 + 13147851 I a score=106394.000000 s hg38.chr3_KI270784v1_alt 54177 20 + 184404 TATGACACAGTAGAATATTA s panTro5.chr1 222337894 20 + 228573443 TATGACACAGTAGAATATTA i panTro5.chr1 C 0 C 0 s panPan2.chr7 56768698 18 + 162613886 --TGACACAGTAAAATATTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015140v1 6383287 20 - 8676498 TATGACACAGTAGAATATTA i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46828361 20 - 99891981 TATGACCCAGTAGAATATTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55134161 20 + 185818997 TATGACACAGTAGAATATTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127726537 20 - 192294377 TATGACACAGTAGAATATTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9027157 20 - 10413719 TATGACATAATAGAATATTA i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 68918 20 - 113584 TATGACACAGTAGAATATTA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124181372 20 - 127223203 TATGACACAGTAGAATATTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 81891 20 - 148006 TATGACACAGTAGAATATTA i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 819750 20 + 1536524 TATGACATAATAGAATATTA i colAng1.NW_012116633v1 C 0 C 0 s aotNan1.NW_018487315v1 6226422 5 - 15679484 --------------ATATT- i aotNan1.NW_018487315v1 C 0 C 0 e calJac3.chr2 1466332 315 + 204313951 I e saiBol1.JH378167 190544 3 + 13147851 I a score=4632498.000000 s hg38.chr3_KI270784v1_alt 54197 684 + 184404 AAATACTATTTTCAAAATGTATACAAGCTTAATGTTCTATGTATTCAAACTATTTATTCAAAATACAAATCATCAACATAAATTGCCACTAA-----TATTCAGTCCCTTCACAGG--ACATGATTCACTGGGAGTTAATCAATTAGCAGCCGGCAGGCAGTGACACACCACAAAAATGAAAACCAAGAGGTGAAA------TAGTTCTGAAATA---AAGGTT-----TTAAAGCTAACAGAAATCACTGAATTACTAAGTCATTAGCACTAATTTTGAGCCAACTAACTAATTAATATGAGATGATACAATGTCCTATACTTTGGTAAATACAGACTATGTTTA-AACAATGTCTGTAACGTGACTTGT-AAAATGCTCCTGGCTTTACAAAGATGTGATTAAGATGTAG-TAACACATGCTAAACCATTTCCCCCTGCA---GAGCATGTGGTAACTTTCATCAGTCACACTGAGAGTCCAGAAGATAAAGGAAAAGGTCATGGATTTCGCTGAGAACTTACCAGAGTTGAACTCCCTCATTTTCCGTTCCCCAGCATTGGCGGGTTCTGGGACTGGTGGCTGTGGTGGCTCGTTGGTCTTTG-TCTCTTAGAAGGTGGGGAATAATCATCATCTTG----AAAAAG-AAAAAATGGTCATTACTGAAGGAACCATCTTAG-GTTACAGCCACCTCTGGGTCAATTCCCAACATT s panTro5.chr1 222337914 686 + 228573443 AAATACTATTTTCAAAATGTATACAAGCTTAATGTTCTATGTATTCAAACTATTTATTCAAAATACAAATCATCAACATAAATTGCCACTAA-----TATTCAGTCCCTTCACAGGACACATGATTCACTGGGAGTTAATAAATTAGCAGCCGGCAGGCAGTGACACACAGCAAAAATGAAAACCAAGAGGTGAAA------TAGTTCTGAAATA---AAGGTT-----TTAAAGCTAACAGAAATCACTGAATTACTAAGTCATTAGCACTAATTTTGAGCCAACTAACTAATTAATATGAGATGATACAACGTCCTATACTTTGGTAAATACAGACTATGTTTA-AACAATGTCTGTAACGTGACTTGT-AAAATGCTCCTGGCTTTACAAAGATGTGATTAAGATGTAG-TAACACATGCTAAACCATTTCCCCCTGTA---GAGCATGTGGTAACTTTCATCAGTCACATTGAGAGTCCAGAAGATAAAGGAAAAGGTCATGGATTTCGCTGAGAACTTACCAGAGTTGAACTCCCTCATTTTCCGTTCCCCAGCATTGGCGGGTTCTGGGACTGGTGGCTGTGGTGGCTCGTTGGTCTTTG-TCTCTTAGAAGGTGGGGAATAATCATCATCTTG----AAAAAG-AAAAAATGGTCATTACTGAAGGAACCATCTTAG-GTTACAGCCACCTCTGGGTCAATTCCCAACATT i panTro5.chr1 C 0 C 0 s panPan2.chr7 56768716 686 + 162613886 AAATACTATTTTCAAAATGTATACAAGCTTAATGTTCTATTTATTCAAACTATTTATTTAAAATACAAATCATCAACATAATTTGCCACTAAAATCTCATGCAGTCCCTTCACAGGACACATGATCCACTGGGAGTTAATAAATTAGCAGCTGGCAGGCAGTGACACACAGCAAAAATGAAAACCAAGAGGTGAAA------CAGTTTTGAAATAAAGAAGGTT-----TTAAAGCTAAGAGAAATTATTGAATTACTAAGTCATTAGCACTAATTTTGAGCC----AACTAATTAATATGAGATGATACAACGTCCTATGCTTTGGTAAATTCAAACTATGTTTA-AACACTGTCTGTAATGTGACTTTC-AAAATGCTCCTGGCTTTACAAAGATGAGATTATAATGTAG-TAATACATGCTAAAGCATTTCCCCCTGCA---GAACATGTTCTAACTTTCATCAGTCACATTGAGAGTCCAGAAGATGAAGGAAAAGGTCATGGATTTCGCTGAGAACTTACCAGAGCTGAACTCCCTCACTTTCCGTTCCCCAGCATTGGCAGGTTCCAGGACTGGTGGCTGTGGTGGCTCGTTGGTCTTTGTTCTCTTAGAAGGTGGAGAATAATCATCATCTTG----AAAAAG---AAAATGGTGATTATTGAAGGAACCATCTTAGAGTTACAGCCACCTGCGGGTCAA----CAACATT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015140v1 6383307 686 - 8676498 AAATACTATTTTCAAAATGTATACAAGCTTAATGTTCTATGTATTCAAACTATTTATTCAAAATACAAATCATCAACATAA-TTGCCACTAA-----TATTCAGTCCCTTCACAGGACACATGATTCACTGGGAGTTAATAAATTAGCAGCCGGCAGGCAGTGACACACAGCAAAAATGAAAACCAAGAGGTGAAA------TAGTTCTGAAATA---AAGGTT-----TTAAAGCTAACAGAAATCACTGAATTACTAAGTCATTAGCACTAATTTTGAGCCAACTAACTAATTAATATGAGATGATACAATGTCCTATACTTTGGTAAATACAGACTATGTTTA-AACAATGTCTGTAACGTGACTTGTCAAAATGCTCCTGGCTTTACAAAGATGTGATTAAGATGTAG-TAACACATGCTAAACCATTTCCCCCTGCA---GAGCATGTGGTAACTTTCATCAGTCACATTGAGAGTCCAGAAGATAAAGGAAAAGGTCATGGATTTCGCTGAGAACTTACCAGAGTTGAACTCCCTCATTTTCCGTTCCCCAGCATTGGCGGGTTCTGGGACTGGTGGCTGTGGTGGCTCGTTGGTCTTTG-TCTCTTAGAAGGTGGGGAATAATCATCATCTTG----AAAAAG-AAAAAATGGTCATTACTGAAGGAACCATCTTAG-GTTACAGCCACCTCTGGGTCAATTCCCAACATT i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46828381 685 - 99891981 AAATACTATTTTCAAAATGTATGCAAGCTTAATGTTCTATTTATTCAAAC----TATTCAAAATACAAATCATCAACATAATTTGCCACTAATATCTCATGCAGTCCCTTCAGAGGACACATGATTCACTGGGAGTTAATAAATTAGCAGCTGGCAGGCAGTGACACACAGCAAAAATGAAAACCAAGAGGTGAAA------TAGTTCTGAAAG----AAGATT-----TTAAAGCTAAGAGAAATTATTGAATTACTAAGTCATTACCACTAATTTTGAGCC----AACTAACTAATATGAGATGATACAGTATCCTATGCTTTGGTAAATACAAACTATATTTA-AACACTGTCTGTAATGTGACTTTC-AAAATGCTCCTGGCTTTACAAAGATGTGATTAAAATGTAG-TAATACATGCTAAAGCGTTTCCCCCTGCA---GAGCATGTTGTAACTTTCATCAGTCACATTGAGAGTTCAGAAGATGAAGAAAAAGGTTGTGGATTTCACTGAGAACTTACCAGAGTTGAACTCCCTCACTTTCTGTTCCCCAGCATTGGCGGGTTCCGGGACTGGTGGCTGTGGTGGCTCATTGGTCTTTGGTCTCTTAGAAGGTGGAGAATCATCATCATCTTG----AAAAAGAAAAAAATGGTCATTACTGAAGGAACCATCTTATAGTTACAGCCACCTCCAGGTCAATTCCCAACATT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55134181 684 + 185818997 AAATACTATTTT-AAAATTTTTACAAGCTTAATATTCTATTCATTCAAACTATTTATTTAAAATACAAATCATCAACATAATTTGCTACTAA-ATCTCATGCAGTCCCTTCACAGGACACATGAACCACTGGGAGTTAATAAATTAGCAGCTGGTAGGCAGTGACACACAGCAAAAATGAAAACCAAGAGGTGAAA------TGGTTCTGAAATAAAGAAGGTT-----TTAAAGCTAAGAGAAATCATTGAATTACTAAGTCATTAGCACTAATTTTAAG----CCAACTAATTAATATGAGATAATACAATGTCCTATGCTTTGGTAAATTCAAACTATATTTA-AACACTGTCTGTAATGTGACTTTC-AAAATGCTCCTGGCCTTACAAAGATGAGATTACAATGTAG-TAATACATGCTAAAGCGTTTCCCCCTGCA---AAGCATGTTGTAACTTTCATTAGTCACATTGAGAGTCCAGAAGATGAAGGAAAAGGTTGTAGATTTTGCTGAGAACTTACCAGAGTTGAACTCCTTCACTTTCCGTTGCCCAGCATTGGCGGGTTCCAAGAGTGGTGGCTATAGTGGCTCGTTGGTCTTTGGTCTCTTAGAAGGTGGAGAATCATCATCATCTTG----AAAAAG---AAAATGGTCATTATTGAAGGAACCATTGTAGAGTTACAGCCACCTCCTGGTCAA----CAACATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127726557 685 - 192294377 AAATACTATTTT-AAAATTTTTACAAGCTTAATATTCTATTCATTCAAACTATTTATTTAAAATACAAATCATCAACATAATTTGCTACTAAAATCTCATGCAGTCCCTTCACAGGACACATGAACCACTGGGAGTTAATAAATTAGCAGCTGGTAGGCAGTGACACACAGCAAAAATGAAAACCAAGAGGTGAAA------TGGTTCTGAAATAAAGAAGGTT-----TTAAAGCTAAGAGAAATCATTGAATTACTAAGTCATTAGCACTAATTTTAAG----CCAACTAATTAATATGAGATAATACAATGTCCTATGCTTTGGTAAATTCAAACTATATTTA-AACACTGTCTGTAATGTGACTTTC-AAAATGCTCCTGGCCTTACAAAGATGAGATTACAATGCAG-TAATACATGCTAAAGCGTTTCCCCCTGCA---AAGCATGTTGTAACTTTCATTAGTCACATTGAGAGTCCAGAAGATGAAGGAAAAGGTTGTAGATTTCGCTGAGAACTTACCAGAGTTGAACTCCTTCACTTTCCGTTGCCCAGCATTGGCGGGTTCCAAGAGTGGTGGCTATAGTGGCTCGTTGGTCTTTGGTCTCTTAGAAGGTGGAGAATCATCATCATCTTG----AAAAAG---AAAATGGTCATTATTGAAGGAACCATTGTAGAGTTACAGCCACCTCCTGGTCAA----CAACATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9027177 684 - 10413719 AAATACTATTTTCAACATGTATACAAGCTTAATGATCTATTTA-----------TATCCAAAATATGAATCATCAACATAATTTGCCACTAATATCTCATTCAGTCCCTTCACAGGACACATGATCCACTAGGAGTTAACAGATTAGCAGCTGACAGGCAGTGACACACAGCAAAAACGAAAATGAAGAGATGAAA------TAGCTTTGAAATAAAGAAGGTT-----TTAAAGCTAAGAGAAACCATTGAATTATTAAGTCATTAGCACTAATTTTGAGTCAACTAACTAATTAATGTGAGATGAAACAATGTCCTATGCTTTGGTAAATTCGAACGATGTTTA-AACAATGTCTATAATGTGACTTTC-AAAAAGCTCCTGGCTTTACAAAGGTGAGATTATAATGTAG-TAATA-ATGCTAAAGCATGTCCCCCTGCAGATGAGCATGTTGTAACTTTCATCAGTCACACTGAGAGTCCAGAAGATGAAGGAAAAGGTCGTGGATTTCACTGAGAACTTACCAGAGTTGAACTCCCTCACTTTCTGTTGCCCAACATTGGCAGGTTCTGGAACTGGTGGCTGTGGTGGCTCGTTGGTCTTTGGTCTCTTAGAAGATGGAGAATCATCATCATCTTG----AAAAAG---AAAATGGTCATTACTGAAGGAATCATCTTAG-GTTACAGCCACCTCCTAGTCAATTCCCAACATT i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 68938 687 - 113584 AAATACTATTTTCAAAATGTATACAAGCTTAATGTTCTATTTATTCAAATTGCTTACTCAAAATACAAATCATCAACATAATTTGCCACTAA-----CATTCAGTCCCTTCACAGGACACATGATCCACTGGGAGTTAATAAATTAGCAGCTGGCAGGCAGTGACACACAGCAAAAATGAAAACCAAGAGGTGAAA------TAGTTCTGAAATA---AAAGTT-----TTAAAGCTAAGAGAAATCACTGAATTACTAAGTCATTAGCACTAATTTTGAGCCAACTAACTAATTAATATGAGATGATATAATGTCCTATGCTTTGGTAAATACAAACTATGTTTA-AACAATGTCTGTAACGTGACTTTC-AAAATGCTCCTGGCTTTACAAAGATGTGATTAAAATGTAG-TAATACATGCTAAAACATTTCCCCCTGCA---GAGAATGTTGTAACTTTCATCAGTCACATTGACAGTCCAGAAGATGAAGGAAAAGGTTGTGGATTTCACTGAGAACTTACCAGAGTTGAACTCCCTCACTTTCTGTTGCCCAGCATTGGCAGGTTACGGGACTGGTGGCTGTGGTGTCTCATTGGTCTTTGGTCTCTTAGAAGGTGGGGAATAATCATCATCTTG----AAAAAG-AAAAAATGGTCATTACTGAAGGAACCATCTTAG-GTTACAGCCACCTCCGGGTCAATTCCCAACATT i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124181392 684 - 127223203 AAATACTATTTT-AAAATTTTTACAAGCTTAATATTCTATTCATTCAAACTATTTATTTAAAATACAAATCATCAACATAATTTGCTACTAAAATCTCATGCAGTCCCTTCACAGGACACATGATCCACTGGGAGTTAATAAATTAGCAGCTGGTAGGCAGTGACACACAGCAAAAATGAAAACCAAGAGGTGAAA------TGCTTCTGAAATAAAGAAGGTT-----TTAAAGCTAAGAGAAATCATTGAATTACTAAGTCATTAGCACTAATTTTAAG----CCAACTAATTAATATGAGATAATACAATGTTCTATGCTTTGGTAAATTCAAACTATATTTA-AACACTGTCTGTAATGTGACTTTC-AAAATGCTCCTGGCCTTACAAAGATGAGATTACAATGCAG-TAATACATGCTAAAGCGTTTCCCCCTGCA---GAGCATGTTGTAACTTTCATTAGTCACATTGAGAGTCCAGAAGATGAAGGAAAAGGTTGTAGATTTCGCTGAGAACTTACCAGAGTTGAACTCCTTCACTTTCCGTTGCCCAGCATTGGCGGGTTCCAAGAGTGGTGGCTATAGTGGCTCGTTGGT-TTTGGTCTCTTAGAAGGTGGAGAATCATCATCATCTTG----AAAAAG---AAAATGGTCATTATTGAAGGAACCATCATAGAGTTACAGCCACCTCCTGCTCAA----AAACATT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 81911 685 - 148006 AAATACTATTTT-AAAATTTTTACAAGCTTAATATTCTATTCATTCAAACTATTTATTTAAAATACAAATCATCAACATAATTTGCTACTAAAATCTCATGCAGTCCCTTCACAGGACACATGAACCACTGGGAGTTAATAAATTAGCAGCTGGTAGGCAGTGACACACAGCAAAAATGAAAACCAAGAGGTGAAA------TGGTTCTGAAATAAAGAAGGTT-----TTAAAGCTAAGAGAAATCATTGAATTACTAAGTCATTAGCACTAATTTTAAG----CCAACTAATTAATATGAGATAATACAATGTCCTATGCTTTGGTAAATTCAAACTATATTTA-AACACTGTCTGTAATGTGACTTTC-AAAATGCTCCTGGCCTTACAAAGATGAGATTACAATGCAG-TAATACACGCTAAAGCGTTTCCCCCTGCA---AAGCATGTTGTAACTTTCATTAGTCACATTGAGAGTCCAGAAGATGAAGGAAAAGGTTGTAGATTTCGCTGAGAACTTACCAGAGTTGAACTCCTTCACTTTCCGTTGCCCAGCATTGGTGGGTTCCAAGAGTGGTGGCTATAGTGGCTCATTGGTCTTTGGTCTCTTAGAAGGTGGAGAATCATCATTATCTTG----AAAAAG---AAAATGGTCATTATTGAAGGAACCATCGTAGAGTTACAGCCACCTCCTGGTCAA----CAACATT i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 819770 691 + 1536524 AAATACTATTTGCAAAATGTATACAAGCTTAATGATCTATTTA-----------TATCCAAAATATGAATCATCAACATAATTTGCCACTAATATCTCATTCAGTCCCTTCACAGGACACATGATCCACTAGGAGTTAACAGATTAGCAGCTGACAGGCTGTGACACACAGCAAAAACGAAAATGAAGAGATGATATTTTTTTTGTTTTGAAATAAAGAAAGTT-----TTAAAGCTAAGAGAAACCATTGAATTACTAAGTCATTAGCACTAATTTTGAGCCAACTAACTAATTAATGTGAGATGAAACAATATCCTATGCTTTGGTAAATTCAAACCATGTTTA-AACAATGTCTATAATGCGACTTTC-AAAAAGCTCCTGGCTTTACAAAGGTGAGATTATAATGTAG-TAATACATGCTAAAGCATGTGCCCCTGCAGATGAGCATGTTGTAACTTTCATCAGCCACACTGAGAGTCCAGAAGATGAAGGAAAAGGTCGTGGATTTCACTGAGAACTTACCAGAGTTGAACTCCCTCACTTTCTGTTGCCCAACATTGGCAGGTTCTGGAACTGGTGGCTGTGGTGGCTCGTTGGTCTTTGGTCTCTTAGAAGATGGAGAATAATCATCATCTTG----AAAAAG---AAAATGGTCATTACTGAAGGAATCACCTTAG-GTTACAGCCACCTCCTAGTCAATTCCCAACATT i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1466647 664 + 204313951 AAATACTATTTTCAAAATGTATACAAGCTTAATGTTCTATT-------------TATTCAAAATACGAACCATCAACTTAATTTGCCACTAG------------TCCCTTCACAAAACACATGATCCACTGGGAGTTAACGGATTAGCAACTGACAGGCAGTGACACACAGGAATAAGGAAAACCAAGAGGCGAAA------CCGTTCTGAAGTAAAGAAGGTT-----TTAACGCAAAGAGAAATCAGAGAATTACTAAGTGATTAGCACTAATTCTGACCCAACTAACTAATTAATATGAAATGATGCAATGTCCTATGCTTTGGTAAATTCAAGCTATATTTCTAACAATGTTTGTAACGTGACTTTC-GAAATGCTCCTGGCTCTACAAAGATGAGATTATAATGTAGTTAATACAGGCTAAAGCATTTCCCCCTGCT---GAGCATGTTGTAACTTTCAACAGTCACATTGGGCGTCCAGAAGATGAAGGTAAAGGTTG----------TGGTAACTTACCGAAGTTGAATTTC-TCACCCTCCGTTGCCCAGTATTGGCAGGTTCTGGAACTGGTGGCTATGGTAGCTTGTTGGTCTTTGGTCTCTTAGAAGGTGGAGAACCATCATCATCTTGAAAAAAAAAA---AAAATGGCCACTACTGAAGGAACCATCTTAGAGTTACAGCTAGCTCCCAGTCAATTCCCAACATT i calJac3.chr2 I 315 C 0 s aotNan1.NW_018487315v1 6226427 673 - 15679484 AAATATTATTTTCAAAATGTATACAAGCTTAATGTTCTATT-------------TATTCAAAATACAAACCATCAACTTAATTTGCCACTAG------------TCCCTTCACAAAACACATGATGCACTGGGAGTTAACAGATTAGCAACTGACAGGCAGTGACACACAGCAGTAAGGAAAACCAAGAGGTGAAA------TAGTTCTGAAATAAAGAAGGTTTTCTCTTAACGCTAAGAGAAATCATGGAATTACTAAGTCATTAGTACTAATTTTGACCCAACTAACTGATTAATATGAAATGATGCAATGCCCTATGCTTTGGTAAATTCAAACTATATTTAAAACAATGTTTGTGACATGACTTTC-GAAATGCTCCTGGCTCTACAAAGATGAGATTATAATGTAGTTAATACAGGCTAAAGCATTTCCCCCTGCA---TAGCATGTTGTAACTTTCATCAGTCACATTGAGAGTCCAGAAGATGAAGGTAAAGGTTGTGGATTTCGCTGGTAACTTACCAAAGTTGAACCCC-TCACTTTCTGTTGCCCAGCATTGGCAGGTTCTGGAA-TGGTGGCTATGGTAGCTTGTTGGTCTTTGGTCTCTTAGAAGGTGGAGAACCATCATCATCTTG-----AAAAA---CAAATGGCCACTACTGAAGGAACCACCTTAGAGTTACAACTAGCTCCCGGTCAATTCCCAACATT i aotNan1.NW_018487315v1 C 0 C 0 e saiBol1.JH378167 190544 3 + 13147851 I a score=14898.000000 s hg38.chr3_KI270784v1_alt 54881 2 + 184404 CA s panTro5.chr1 222338600 2 + 228573443 CA i panTro5.chr1 C 0 C 0 s panPan2.chr7 56769402 2 + 162613886 CA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015140v1 6383993 2 - 8676498 CA i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46829066 2 - 99891981 CA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55134865 2 + 185818997 CA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127727242 2 - 192294377 CA i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9027861 2 - 10413719 CA i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 69625 2 - 113584 CA i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124182076 2 - 127223203 CA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 82596 2 - 148006 CA i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 820461 2 + 1536524 CA i colAng1.NW_012116633v1 C 0 C 0 s aotNan1.NW_018487315v1 6227100 2 - 15679484 CA i aotNan1.NW_018487315v1 C 0 I 444 e calJac3.chr2 1467311 0 + 204313951 C e saiBol1.JH378167 190544 3 + 13147851 I a score=247151.000000 s hg38.chr3_KI270784v1_alt 54883 56 + 184404 AAAGCTGAGCAGGGCTTTAAAGCTATCT----TATTAATAATTATTTCTGTATTGCGAAC s panTro5.chr1 222338602 56 + 228573443 AAAGCTGAGCAGGGCTTTAAAGCTATCT----TATTAATAATTATTTCTGTATTGCGAAC i panTro5.chr1 C 0 C 0 s panPan2.chr7 56769404 60 + 162613886 AAAGCTGAACGGGGCTTTAAAGCTATTTTGAGTATTAATAATTATTTCTGTATTGTGATC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015140v1 6383995 55 - 8676498 AAAGCTGAGCAGGGCTTTAAAGCTATCT----TATTAATAATTATTTCTGTATTGC-AAC i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46829068 60 - 99891981 AAAGCTGAGCAGGGCTGTAAAGCTATTTTGAGTATTAATAATTCTTTCTGTATTGTGAAC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55134867 60 + 185818997 AAAGTTGAGTGGAGGTTTAAAGGTATTTTGAGTATTAATAATTATTTCTCTATTGTGACC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127727244 60 - 192294377 AAAGTTGAGTGGAGGTTTAAAGGTATTTTGAGTATTAATAATTATTTCTCTATTGTGACC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9027863 58 - 10413719 AAAGGTAAGTGGC--TTTAAAACTATTTTGAGTATTAATAATTATTCCTGTATTATGATC i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 69627 60 - 113584 AATGCTGAGCAGGGCTTTAAAGCTATTTTGAGTATTAATAATTATTTCTGTATTGTGAAC i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124182078 60 - 127223203 AAAGTTGAGTGGAGGTTTAAAGGTATTTTGAGTATTAATAATTATTTCTCTATTGTGACC i chlSab2.chr21 C 0 I 17 s manLeu1.NW_012100344v1 82598 60 - 148006 AAAGTTGAGTGGAGGTTTAAAGGCATTTTGAGTATTAATAATTATTTCTCTATTGTGACC i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 820463 58 + 1536524 AAAGGTAAGTGGC--TTTAAAACTATTTTGAGTATTAATAATTATTCCTGTATTATGATC i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6227102 444 - 15679484 I e calJac3.chr2 1467311 0 + 204313951 C e saiBol1.JH378167 190544 3 + 13147851 I a score=33462.000000 s hg38.chr3_KI270784v1_alt 54939 8 + 184404 TTCAGCAT s panTro5.chr1 222338658 8 + 228573443 TTCAGCAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 56769464 8 + 162613886 TTCAGCAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015140v1 6384050 8 - 8676498 TTCAGCAT i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46829128 8 - 99891981 TTCAGCAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55134927 8 + 185818997 TTCAGCAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127727304 8 - 192294377 TTCAGCAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9027921 8 - 10413719 ATTAGCAT i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 69687 8 - 113584 TTCAGCAT i cerAty1.NW_012005081v1 C 0 C 0 s manLeu1.NW_012100344v1 82658 8 - 148006 TTCAGCAC i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 820521 8 + 1536524 ATCAGCAT i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6227102 444 - 15679484 I e calJac3.chr2 1467311 0 + 204313951 C e saiBol1.JH378167 190544 3 + 13147851 I e chlSab2.chr21 124182138 17 - 127223203 I a score=2605826.000000 s hg38.chr3_KI270784v1_alt 54947 504 + 184404 ACTTTTTTCTAGTTACATTTGAAATGTTATTCTTTTGGGATGTGCTCAAGTGAGTACTGCTTTTTCCTCTGCCTTGCTTCATTACTTTTTAGTTTCCTTCATTTGAATCATCATTGTAAGTCTCCCCTTCTCCTCAAATAACTTTCAAATTGCTGCCAAGAACTATGTTCTATCTTAAGGCTTTTGAGAAAAAACTTTCAATGAAGATAGCCACCTAAAGTTATACAAATATAGAAGAAACGGGATAAAATAAAGCTTAGATTGGAAAAAATATTTAAGATTCTACAAAATT----CACGCGTAAACAAGGGAAGCTGAGTAATTGTATGTTCAAATACTTTTAACAAGTGCAAAACATGTAGGCTTaaagaaatagagctggccaggcatggtggttcacgcctgtaattccaacagtttgggaggccgaggcaggcagataacttgaggtcaggaattcgagaccagcctggccaacagagtgaaaccctctctctactaaaaata s panTro5.chr1 222338666 503 + 228573443 ACTTTTTCCTAGTTACATTTGAAATGTTATTCTTTTGGGATGTGCTCAAGTGAGTACTGCTTTTTCCTCTGCCTTGCTTCATTACTTTTTAGTTTCCTTCATTTGAATCATCATTGTAAGTCTCCCCTTCTCCTCAAATAACTTTCAAATTGCTGCCAAGAACTATG-TCTATCTTAAGGCTTTTGAGAAAAAACTTTCAATGAAGATAGCCGCCTAAAGTTATACAAATATAGAAGAAACGGGATAAAATAAAGCTTAGATTGGAAAAAATATTTAAGATTATACAAAATT----CACACGTCAACAAGGGAAGCTGAGTAATTGTATGTTCAAATACTTTTAACAAGTGCAAAATATGTAGGCTTAAAGAACTAGAGCTggccaggcatggtggttcacgcctgtaattccaacagtttgggaggccgaggcaggcagataacttgaggtcaggaattcgagaccagcctggccaacagagtgaaaccctctctctactaaaaata i panTro5.chr1 C 0 C 0 s panPan2.chr7 56769472 505 + 162613886 ACTTTTTTCTAGTTTCATTTGAAATTTTATTCTTTTGGGATGTGCTCAAGTGAATACTGCTTTTTC--CTGTCTTGCTTCATTATTTTTTAGTTTGCTTCATTTGAGTCATCATTATAAATCTCCCCTTCTCCTCAAATAACTTTCAAATTGATGCCAAGAACTATATTCTATTTTCAGGCTGTTGAGAAAAAACTTTCAATGAAGACAGCCACCTAAAGCTATACAAATATAGAAGAAAGGGGATAAAATAAAGCTTAGATTGGAAACAA-ATTTAAGATTATACAAAATTCAAGCATACATAAACAAGGGAAGCTGGATAATTATATGTTCAAATACTTTTAACACGTGCAAAATGTGTAGACTTAAAGAAATAGGGCTggccaggcgtggtggctcatgcctataattccaacactttgggaggccaaggcaggcggagcacttgaggtcaggaattcaagaccagcctggccaacatggtgaaaccccatctctactaaaaata i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015140v1 6384058 499 - 8676498 ACTTTTTTCTAGTTACATTTGAAATGTTATTCTTTTGGGATGTGCTCAAGTGAATACTGCTTTTTCCTCTGTCTTGCTTCATTACTTTTTAGTTTGCTTCATTTGAATCATCATTGTAAGTCTCCCCTTCTCCTCAAATAACTTTCAAATTGCTGCCAAGAACTATGTTCTAT-TTAAGGCTTTTGAGAAAAAACTTTCAATGAAGATAGCC-CCTAAAGTTATACAAATATAGAAGAAACGGGATAAAATAAAGCTTAGATTGGAAAAAATATTTAAGATTATACAAAATT----CA-GCATAAACAAGGGAAGCTGAGTAATTGTAT-TTCAAATACTTTTAACAAGTGCAAAACATGTAGGCTTAAAGAAATAGAGCTggccaggcatggtggttcacgcctgtaattccaacagtttgggaggccgaggcaggcagataacttgaggtcaggaattcgagaccagcctggccaacagagtgaaaccc-ctctctactaaaaata i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46829136 506 - 99891981 ACTTTTT-CTAGTTACATTTGAAATTTTATTCTTTTGGGATGTACTCAAGTGAATACTGCTTTTTCCTCTGTCTTGTTTTATTACATTTTACTTTGCTTCATTTGAATCATCATTATAAGTCTCCCCTTCTCCTCAAATAACTTTCAAATTGCTGCCAAGAACTATGTTCTATTTTAAGGCTTTTGAGAAAAAACTTTCAATGAAAATAGCCACCTAAAGTTATACAAATATAGAATAAACAGGATAAAATAAAGCTTAGATTGGAAAAAATATTTAAGATTATACAAAATTCAAGCACACATCAACAAGGGAAGCTGAGTAATTCTATGTTCAAATACTTTTAACA-GTGCAAAATGTGGAGGCTTAAAGAAATAGGGCTggccaggcatggtggttcatgcctgtaattccaacactttgggaggccgaggcaggccaatcacttatggttaggaattcgagaccagccttgccaaaacagtgaaaccccacctctactaaaaata i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55134935 503 + 185818997 ACTTTTTTCTAGTTACATTTGAAATGTTATTCTTTTGGGACGTGCTCAAGTGAATACTGCTTTTTCCTCCGTCTTGCTTCATTACTTTTGAGTTTGCTTCATTTGAGTCATCATTATAAATCTTCCCTTCTCCTCAAATAACTTTCAAATTGTTGCCAAGAACTGTATTCTATTTTAAGGCTTTTGAGAAAAATCTTTCAATGAAGACAGCCACCTAAAGCTATACGAATATAG----AAGGGGATAAAATAAAGCTTAGATTGGAAAAAA-ATTCAAGATTATACAAAATTCAAGCATACATAAACAAGGGAAGCTGGATAATTGTATGTTCAAATACTTTTAATATGTGCAAAATGTGTAGGGTTaaagaaatagagctggccaggtatggtggctcacgcctgtaattccaacactttgggaggccaaggcaggcagagcacttgaggtcaggaattcgagaccagcctggcctacacggtgaaaccccatctctactaaaaata i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127727312 503 - 192294377 ACTTTTTTCTAGTTACATTTGAAATGTTATTCTTTTGGGACGTGCTCAAGTGAATACTGCTTTTTCCTCCGTCTTGCTTCATTACTTTTGAGTTTGCTTCATTTGAGTCATCATTATAAATCTTCCCTTCTCCTCAAATAACTTTCAAATTGTTGCCAAGAACTGTATTCTATTTTAAGGCTTTTGAGAAAAATCTTTCAATGAAGACAGCCACCTAAAGCTATACGAATATAG----AAGGGGATAAAATAAAGCTTAGATTGGAAAAAA-ATTCAAGATTATACAAAATTCAAGCATACATAAACAAGGGAAGCTGGATAATTGTATGTTCAAATACTTTTAATATGTGCAAAATGTGTAGGGTTAAAGAAATAGAGCTggccaggtatggtggctcacgcctgtaattccaacactttgggaggccaaggcaggcagagcacttgaggtcaggaattcgagaccagcctggcctacacggtgaaaccccatctctactaaaaata i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9027929 508 - 10413719 ACCTTTTTCTAGTTGCATCTGAAATTTTATTTTTTGGGGATGTGCTCGAGTGAATACTGTTTTATCCTCTGTCTTGCTTCATTATTTTTTAGTTTGCTTCATTTGAATCATCATTACAAATCTCCCCTTGCCCTCAAATAACTCTGAAATTGCTGCCAAGAACTATATTCTATTTTAAGGCTTTTCAGAAAAAACTTTCAACAAAGACAGCCACCGAAAGTTATACAAATACAGAAGAAAGGGGATATAATAAAGCTTAGACTGGAAAAAATATTTAAGCTTATACAAAATTCAAGCATACATAAACAAGGGAAGCTGGATAATTGTATGTTCAAATACTTTTAATAAGTGCAAAACGTATATGCTTAAAGAAATAGGGCTggccgggcgtgttggctcatgcctgtaattccaacactttgggaggccgaggcaggctgattacttgaggtcaggaattcgagaccagccttgccaacatggtgaaaccccatctctactaaaaata i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 69695 500 - 113584 ACTTTTTTCTAGTTACATTTGAAATGTTATTCTTTTGGGATGTGCTCAAGTGAATACTGCTTTTTCCTCTGTCTTGCTTCACTACTTTTTAGTTTGCTTCATTTGAATCATCATTGTAAGTCTCCCCTTCTCCTCAAATAGCTTTCAAATTGCTGCCAAGAACAATAATCTATTTTAAGGCTTTT--GAAAAAACTTTCAATGAAGATAGCCACCT--AGTTATACAAATACAGAAGAAACGGGATAAAATAAAGCTTAGATTGGAAAAAATATTTAAGATTATACAAAATTCAAG----CATCAACAAGGGAAGCTGGGTAATTGTATGTTCAAATACTTTTAACAAGTGCAAAATGTGTAGCCTTAAAGATATAGGGCTggccaggcatggtggttcacgcctgtaattccaacactttgggaggccgaggtaggctgatcacttgaggtccggaattggagaccagccttgccaacatggtgaaaccccaactctactaaaaaca i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124182155 503 - 127223203 ACTTTTTTCTAGTTACATTTGAAATGTTATTCTTTTGGGATGTGCGCAAGTGAATACTGCTTTTTCCTCCGTCTTGCTTCATTACTTTTGAGTTTGCTTCATTTGAATCATCATTATAAATCTTCCCTTCTCCTCAAATAACTTTCAAATTGTTGCCAAGAACTGTATTCTATTTTAAGGCTTTTGAGAAAAATCTTTCAATGAAGACAGCCACCTAAAGCTATACGAATATAG----AAGGGGATAAAATAAAGCTTAGATTGGAAAAAA-ATTCAAGATTATACAAAATTCAAGCATACATAAACAAGGGAAGCTGGATAATTGTATGTTCAAATACTTTTAATATGTGCAAAATGTGTAGGCTTAAAGAAATAGAGCTggccaggtatggtggctcacgcctgtaattccaacactttgggaggccaaggcaggcagagcacgtgaggtcaggaattcgagaccagcctagcctacatggtgaaaccccatctctactaaaaata i chlSab2.chr21 I 17 C 0 s manLeu1.NW_012100344v1 82666 503 - 148006 ACTTTTTTCTAGTTACATTTGAAATGTTATTCTTTTGGGATGTGCTCAAGTGAATACTGCTTTTTCCTCCGTCTTGCTTCATTACTTTTGAGTTTGCTTCATTTGAGTCATCATTATAAATCTTCCCTTCTCCTCAAATAACTTTCAAATTGTTGCCAAGAACTGTATTCTATTTTAAGGCTTTTGAGAAAAATCTTTCAATGAAGACAGCCACCTAAAGCTATACGAATATAG----AAGGGGATAAAATAAAGCTTAGATTGGAAAAAA-ATTCAAGATTATACAAAATTCAAGCATACATAAACAAGGGAAGCTGGATAATTGTATGTTCAAATACTTTTAATATGTGCAAAATGTGTAGGCTTAAAGAAATAGAGCTggccaggtatggtggctcacgtctgtaattccaacactttgggaggccaaggcaggcagagcacttgaggtcaggaatttgagaccagcctggcctacacggtgaaaccccatctctactaaaaata i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 820529 507 + 1536524 ACCTTTTTCTAGTTACATCTGAAATTTTATTTTTTTGGGATGTGCTCGAGTGACTACTGTTTTATCCTCTGTCTTGCTTCATTATTTTTTAGTTTGCTTCATTTGAATCATCATTACAAATCTCCCCTTGCCCTCAAATAATTCTGAAATTGCTGCCAAGAACTATATTCTGTTTTAAGGTTTTTCAGAAAAAACTTTCAACAAAGACAGCCACCTAAAGTTATACAAATACAGAAGAAAGGGGATATAATAAAGCTTAGATTGGAAAAAA-GTTCAAGATTATACAAAATTCAAGCATACATAAACAAGGGAAGCTGGATAATTGTATGTTCAAATACTTTTAATAAGTGCAAAACATATATGCTTAAAGAAATAGGGCTggctgggcgtgtttgctcatgcctgtaattccaacactttggaaggccaagacaggcagatcacttgaggtcaggaattcaagaccatcctggccaacatggtgaaacctcatctctactaaaaata i colAng1.NW_012116633v1 C 0 C 0 e aotNan1.NW_018487315v1 6227102 444 - 15679484 I e calJac3.chr2 1467311 0 + 204313951 C e saiBol1.JH378167 190544 3 + 13147851 I a score=202588.000000 s hg38.chr3_KI270784v1_alt 55451 34 + 184404 caaaaattaggccaggagtgatggctcatgcctg s panTro5.chr1 222339169 34 + 228573443 caaaaattaggccaggagtgatggctcatgcctg i panTro5.chr1 C 0 C 0 s panPan2.chr7 56769977 34 + 162613886 caaatattaggctgggcgcggtggcttatgcctg i panPan2.chr7 C 0 I 20 s gorGor5.CYUI01015140v1 6384557 34 - 8676498 caaaaattaggccaggagcgatggctcatgcctg i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46829642 34 - 99891981 caaaaattaggccaggagccgtggctcacacctg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55135438 34 + 185818997 caaaaattaggctgggcgcggtggctcatgcctg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127727815 34 - 192294377 caaaaattaggctgggcgcggtggctcatgcctg i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9028437 34 - 10413719 caaaaattaggctgggcgtggtggctcacacctg i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 70195 34 - 113584 caaaaattagggcaggagcggtggctcacgcctg i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124182658 34 - 127223203 caaaaattaggttgggcgcggtggctcatgcctg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 83169 34 - 148006 caaaaattaggctgggcgcggtggctcatgcctg i manLeu1.NW_012100344v1 C 0 C 0 s colAng1.NW_012116633v1 821036 34 + 1536524 caaaaattaggccgggcgtggtggctcacacctg i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1467311 34 + 204313951 CATAAATTAggccaggcacagtggctcatgcctg i calJac3.chr2 C 0 C 0 e aotNan1.NW_018487315v1 6227102 444 - 15679484 I e saiBol1.JH378167 190544 3 + 13147851 I a score=1209650.000000 s hg38.chr3_KI270784v1_alt 55485 261 + 184404 tgatcccagcactttgagaggccgaggcgggtagatcacctgaggtcaggagtttg-agaccagcctaaccaacatagggaaaccccgtctctactaaaactacaacattagccgggtgtggtggcacatgcctgtaatcccagctactcgggaggct------gaggcaggagaatcccttgaacccaaaaggcaaagattgtggtgagccgagattgtgccattgcactccagcctgggcaaaaacagcgaaactccgtctc-aaaa s panTro5.chr1 222339203 259 + 228573443 tgatcccagcactttgagaggccgaggcgggtagatcacctgaggtcaggagtttg-agaccagcctaaccaacatagagaaaccccgtctctactaaaactacaacattagccgggtgtggtggcacatgcctgtaatccaagctactcgggaggct------gaggcaggagaatcccttgaacccgaaaggcaaagattgtggtgagccgagattgtgccattgcactccagcctaggcaacaacagcaaaactccgtctc---aa i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015140v1 6384591 258 - 8676498 tgatcccagcactttgagaggccgaggcgggtagatcacctgaggtcaggagtttg-agaccagcctaaccaacatagagaaaccccgtctctactaaaa-tacaacattagccgggtgtggtggcacatgcctgtaatcccagctactcgggaggct------gaggcaggagaatcccttgaacccgaaaggcaaagattgtggtgagccgagattgtgccattgcactccagcctgggcaacaacagcgaaactccatctc---aa i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46829676 268 - 99891981 taatcccagcactttgagaggccgaggcaggtagatcacccgaggtcaggagtttg-agaccagcctgaccaacataaagaaatcttgtctctactaaaaatacaacattagccgggtgtggtggtgcatgcctgtaatccctgctacttgggaggctgaggcagaggcagaagaatcacttgaacctgaaaggcaaaggttgtggtgagctgagatcgtgccattgcactccagcctgggcaacaagagtgaaactccatctcaaaaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55135472 262 + 185818997 tgatcccagcactttgggaggccaagaaggctagatcacctgaggtcgggagtttagagaccagcctgaccaaaatagagaaatcccgtctctactaaaaatacaatattagccaggcacggtggcgcatgcctgtaaacccagctactcagggcact------gaggcaggagaatcgcttgaacccaaaaggcaaaggttgcagtgagacgagatcgtgccattgcactccagcctgggcaacaagagtgaaactccgtctc-aaaa i rheMac8.chr3 C 0 I 266 s macFas5.chr3 127727849 262 - 192294377 tgatcccagcactttgggaggccaagaaggctagatcacctgaggtcgggagtttagagaccagcctgaccaaaatagagaaatcccgtctctactaaaaatacactattagccaggcgcggtggcgcatgcctgtaaacccagctactcagggcact------gaggcaggagaatcgcttgaacccaaaaggcaaaggttgcagtgagacgagatcgtgccattgcactccagcctgggcaacaagagtgaaactccgtctc-aaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9028471 260 - 10413719 taattccagaactttgggaagctgaggtgggcggatcacctgaggtcgggagttca-agatcagcctgactaacatggagaaaccctctctctattaaaaatacaaaattagccaggtatggtggcacatgcatgtaatcccagctactcaggagact------gaggcaggagaatcacttgaacccaggagacggaggttgcagtaagccaagatgatgacattgtactctagcctgggcaacaagagc-aaactctgtctc-aaaa i macNem1.NW_012013022v1 C 0 C 0 s cerAty1.NW_012005081v1 70229 261 - 113584 tgatcctgggactttgagaggccaatgtgggtagatcacctcaggttgggagtttg-agaccagcctaaccaacatagagaaaccccatctctaccaaaaacacaacgttagccaggcgtggtggcacatgcctgtaatcacaactactcgggaggct------gaggcaggataactgcttgaacctgaaaggcaaagattgtggtgagctgagattgtgccactacactccagcctaggcaacaaaagcgaaactccgtctc-aaaa i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124182692 262 - 127223203 tgatcccagcactttgggaggccaaggcggctagatcacctgaggtcgggagtttagagaccagcctgaccaaaacagagaaatcccgtctctactaaaaatacaatattagccaggcgcggtggcgcatgcctgtaaacccagctactcagggcact------gaggcaggagaatcgcttgaacccaaaaggcaaaggttgcagtgagacgagattgtgccattgcactccagcctgggcaacaagagtgaaactccgtctc-aaaa i chlSab2.chr21 C 0 I 261 s manLeu1.NW_012100344v1 83203 262 - 148006 tgatcccagcactttgggaggccaagaaggctagatcacctgaggttgggagtttagagaccagcctgaccaaaatagagaaatcccgtctctactaaaaatacaatattagccaggggcggtggcacatgcctgtaaacccagctactcagggcact------gaggcaggagaatcgcttgaacccaaaaggcaaaggttgcagtgagacgagatcgtgccattgcactccagcctgggcaacaagagtgaaactccgtctc-aaaa i manLeu1.NW_012100344v1 C 0 I 368 s colAng1.NW_012116633v1 821070 260 + 1536524 taattctagaactctgggaagctgaggtgggcggatcacctgaggtcgggagttca-agatcagcctgactaacatggagaaatcctgtctctattaaaaatacaaaattagccaggtatggtagcacatgcatgtaatcccagctactcaggagact------gaggcaggagaatcacttgaacccaggaggcagaggttgcagtaagctgagatgatgacattgtacgctagcctgggcaacaagagc-aaactctgtctc-aaaa i colAng1.NW_012116633v1 C 0 C 0 s calJac3.chr2 1467345 250 + 204313951 taatcccaaaattttgggaggctgaggcaggcagatcgcctgaggtcaggagtttg-agatcagcctgcctagcacagagaaaccccgtctctactaaaaatgcaaaattagcaggtcatggtgg----tgcccataatcccagctactcgggaggct------gacacaagacaatcccttgaacccaagaggtggagattgcagtgagccgagatcacataattgcactccagcctgg--aacaagagcaaaactccagct------ i calJac3.chr2 C 0 C 0 e aotNan1.NW_018487315v1 6227102 444 - 15679484 I e saiBol1.JH378167 190544 3 + 13147851 I e panPan2.chr7 56770011 20 + 162613886 I a score=7516.000000 s hg38.chr3_KI270784v1_alt 55746 7 + 184404 aaaaaaa s panTro5.chr1 222339462 7 + 228573443 aaaaaaa i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015140v1 6384849 7 - 8676498 aaaaaaa i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46829944 7 - 99891981 caaaaag i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127728111 5 - 192294377 --gacaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9028731 5 - 10413719 --acaaa i macNem1.NW_012013022v1 C 0 I 177 s cerAty1.NW_012005081v1 70490 7 - 113584 caaaaaa i cerAty1.NW_012005081v1 C 0 I 119 s colAng1.NW_012116633v1 821330 7 + 1536524 acaaaaa i colAng1.NW_012116633v1 C 0 I 1 e aotNan1.NW_018487315v1 6227102 444 - 15679484 I e calJac3.chr2 1467595 0 + 204313951 C e saiBol1.JH378167 190544 3 + 13147851 I e rheMac8.chr3 55135734 266 + 185818997 I e manLeu1.NW_012100344v1 83465 368 - 148006 I e chlSab2.chr21 124182954 261 - 127223203 I e panPan2.chr7 56770011 20 + 162613886 I a score=546.000000 s hg38.chr3_KI270784v1_alt 55753 1 + 184404 a s panTro5.chr1 222339469 1 + 228573443 a i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015140v1 6384856 1 - 8676498 a i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46829951 1 - 99891981 a i nomLeu3.chr17 C 0 C 0 e aotNan1.NW_018487315v1 6227102 444 - 15679484 I e calJac3.chr2 1467595 0 + 204313951 C e cerAty1.NW_012005081v1 70497 119 - 113584 I e saiBol1.JH378167 190544 3 + 13147851 I e colAng1.NW_012116633v1 821337 1 + 1536524 I e rheMac8.chr3 55135734 266 + 185818997 I e manLeu1.NW_012100344v1 83465 368 - 148006 I e chlSab2.chr21 124182954 261 - 127223203 I e macNem1.NW_012013022v1 9028736 177 - 10413719 I e macFas5.chr3 127728116 0 - 192294377 C e panPan2.chr7 56770011 20 + 162613886 I a score=25327.000000 s hg38.chr3_KI270784v1_alt 55754 17 + 184404 aagaaaaaattagccag s panTro5.chr1 222339470 17 + 228573443 aagaaaaaattagccag i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015140v1 6384857 17 - 8676498 aagaaaaaattagccag i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46829952 17 - 99891981 aaacaaaaattagccag i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127728116 14 - 192294377 ---caaaaattagccag i macFas5.chr3 C 0 C 0 s colAng1.NW_012116633v1 821338 17 + 1536524 aaaaaagtattagccag i colAng1.NW_012116633v1 I 1 I 146 s calJac3.chr2 1467595 17 + 204313951 gaaaaaaaattagccag i calJac3.chr2 C 0 C 0 e aotNan1.NW_018487315v1 6227102 444 - 15679484 I e cerAty1.NW_012005081v1 70497 119 - 113584 I e saiBol1.JH378167 190544 3 + 13147851 I e rheMac8.chr3 55135734 266 + 185818997 I e manLeu1.NW_012100344v1 83465 368 - 148006 I e chlSab2.chr21 124182954 261 - 127223203 I e macNem1.NW_012013022v1 9028736 177 - 10413719 I e panPan2.chr7 56770011 20 + 162613886 I a score=4302.000000 s hg38.chr3_KI270784v1_alt 55771 6 + 184404 gcatgg s panTro5.chr1 222339487 6 + 228573443 gcgtgg i panTro5.chr1 C 0 I 67 s gorGor5.CYUI01015140v1 6384874 5 - 8676498 g-gtgg i gorGor5.CYUI01015140v1 C 0 I 67 s nomLeu3.chr17 46829969 6 - 99891981 gcatgg i nomLeu3.chr17 C 0 I 63 s macFas5.chr3 127728130 6 - 192294377 gagtgg i macFas5.chr3 C 0 I 63 s calJac3.chr2 1467612 6 + 204313951 gcgtgg i calJac3.chr2 C 0 C 0 e aotNan1.NW_018487315v1 6227102 444 - 15679484 I e cerAty1.NW_012005081v1 70497 119 - 113584 I e saiBol1.JH378167 190544 3 + 13147851 I e colAng1.NW_012116633v1 821355 146 + 1536524 I e rheMac8.chr3 55135734 266 + 185818997 I e manLeu1.NW_012100344v1 83465 368 - 148006 I e chlSab2.chr21 124182954 261 - 127223203 I e macNem1.NW_012013022v1 9028736 177 - 10413719 I e panPan2.chr7 56770011 20 + 162613886 I a score=80651.000000 s hg38.chr3_KI270784v1_alt 55777 108 + 184404 --------------------------------------------------------------tgaagttgcggtgagctgagactgcaccattgcactccagcctgggtagtagagcaagaccctgtctca------------------aaaaaaaaaaaaaaaaaaaaa----------------------------------------------------aaaaaaaaagagagagag s panTro5.chr1 222339560 96 + 228573443 --------------------------------------------------------------tgaagttgccgtgagccgagactgcaccattgcactccagcctgggtagcagagcaagaccctgtctca------------------aaaaaaaaaaaaaaaaaaaaa----------------------------------------------------------------aGAGAG i panTro5.chr1 I 67 C 0 s gorGor5.CYUI01015140v1 6384946 89 - 8676498 --------------------------------------------------------------tgaagttgcggtgagccgagactgcaccattgcactccagcctgggtaacagagcaagaccctgtctca------------------aaaaaaaaaaaaaa-----------------------------------------------------------------------agagag i gorGor5.CYUI01015140v1 I 67 C 0 s nomLeu3.chr17 46830038 160 - 99891981 --------------------------------------------------------------tgaagttgcggtgagccgagattgtaccactgcacttcagcctgggtaacagagcaaaaccctgtaaga------------------aagaaagagggagaaagagagagagacagaaagcgagagagagagagaaagagagagatgaaaggaagaaaggaagaaaacaaagaaagaa i nomLeu3.chr17 I 63 C 0 s macFas5.chr3 127728199 113 - 192294377 --------------------------------------------------------------agaagttgtggttagccgagatcacataactgtactcaagcctgggtaacagagcaagaccctgtctcaacaaaaaagaaaagaaagaagaaaagaagaaagaaaagg----------------------------------------------------------------aagga- i macFas5.chr3 I 63 I 65 s cerAty1.NW_012005081v1 70616 91 - 113584 --------------------------------------------------------------tgaagttgtggtgagccgagatcacaccattgcactccagcctgggtaacagagcaagaccctgt----------------------aaaaaaagaaaaatgaaaaga----------------------------------------------------------------aaaga- i cerAty1.NW_012005081v1 I 119 C 0 s calJac3.chr2 1467618 136 + 204313951 tggtgcctgtaatcccagctactcaggaggccgaggcaggagaattgcttgatacgggaggcagaagttgcagtgagccaagatcacacgactgcactccagcctgggtaacagagcaaaatccagtctaa------------------aaaaa-------------------------------------------------------------------------------------- i calJac3.chr2 C 0 C 0 e aotNan1.NW_018487315v1 6227102 444 - 15679484 I e saiBol1.JH378167 190544 3 + 13147851 I e colAng1.NW_012116633v1 821355 146 + 1536524 I e rheMac8.chr3 55135734 266 + 185818997 I e manLeu1.NW_012100344v1 83465 368 - 148006 I e chlSab2.chr21 124182954 261 - 127223203 I e macNem1.NW_012013022v1 9028736 177 - 10413719 I e panPan2.chr7 56770011 20 + 162613886 I a score=26557.000000 s hg38.chr3_KI270784v1_alt 55885 14 + 184404 agaaagaaagaaag s panTro5.chr1 222339656 14 + 228573443 AGAGAGAAAGAAAG i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015140v1 6385035 14 - 8676498 agaaagaaaGAAAG i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46830198 14 - 99891981 agaaagaaagaaag i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55136000 14 + 185818997 agaaagaaagaaaA i rheMac8.chr3 I 266 I 1 s macFas5.chr3 127728377 14 - 192294377 ggaaggaaAGAAAA i macFas5.chr3 I 65 I 1 s cerAty1.NW_012005081v1 70707 10 - 113584 aGGAAGAAAG---- i cerAty1.NW_012005081v1 C 0 C 0 s calJac3.chr2 1467754 13 + 204313951 -ggaagcaagaaGT i calJac3.chr2 C 0 C 0 s aotNan1.NW_018487315v1 6227546 14 - 15679484 agaaaGCAAGAAGT i aotNan1.NW_018487315v1 I 444 C 0 e saiBol1.JH378167 190544 3 + 13147851 I e colAng1.NW_012116633v1 821355 146 + 1536524 I e manLeu1.NW_012100344v1 83465 368 - 148006 I e chlSab2.chr21 124182954 261 - 127223203 I e macNem1.NW_012013022v1 9028736 177 - 10413719 I e panPan2.chr7 56770011 20 + 162613886 I a score=241172.000000 s hg38.chr3_KI270784v1_alt 55899 44 + 184404 aGGGCTACATTATTTATGAAACAGATACTGTTAACTCAGTCACC s panTro5.chr1 222339670 44 + 228573443 AGGGCTACATTATTTATGAAACAGATACTGTTAACTCAGTCACC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015140v1 6385049 44 - 8676498 AGGGCTACATTATTTATGAAACAGATACTGTTAACTCAGTCACC i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46830212 44 - 99891981 aGGGCTAAATTATTTACGAAACAGATACTGTTGACTCAGTCACC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55136015 44 + 185818997 AGGGATACATTATTTATGAAACAGATACTGTTGACTCAGTTACC i rheMac8.chr3 I 1 C 0 s macFas5.chr3 127728392 44 - 192294377 AGGGATACATTATTTATGAAACAGATACTGTTGACTCAGTTACC i macFas5.chr3 I 1 C 0 s macNem1.NW_012013022v1 9028913 44 - 10413719 AGGGCTATATTATTTATGAAACAGATACTGTTGACTCAGTCACC i macNem1.NW_012013022v1 I 177 C 0 s cerAty1.NW_012005081v1 70717 44 - 113584 ATGGTTACATTATTTATGAAACACATACTATTAACTCAGTCACC i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124183215 44 - 127223203 AGGGATACATTATTTATGAAACAGATACTGTTGACTCAGTTACC i chlSab2.chr21 I 261 C 0 s colAng1.NW_012116633v1 821501 44 + 1536524 AGGGCTATATTATTTATGAAACAGAAACTGTTGACTCAGTCATC i colAng1.NW_012116633v1 I 146 C 0 s calJac3.chr2 1467767 44 + 204313951 AGGGCTACATTATTTATGAAACAGATACTGTTGACTCAGTCACC i calJac3.chr2 C 0 C 0 s aotNan1.NW_018487315v1 6227560 44 - 15679484 AGGGCTACATTATTTATGAAACAGATACAGTTGACTCAGTCACC i aotNan1.NW_018487315v1 C 0 C 0 e saiBol1.JH378167 190544 3 + 13147851 I e manLeu1.NW_012100344v1 83465 368 - 148006 I e panPan2.chr7 56770011 20 + 162613886 I a score=57132.000000 s hg38.chr3_KI270784v1_alt 55943 8 + 184404 AGAAAGCC s panTro5.chr1 222339714 8 + 228573443 AGAAAGCC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015140v1 6385093 8 - 8676498 AGAAAGCC i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46830256 8 - 99891981 AGACAGCC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55136059 8 + 185818997 AGAAAGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127728436 8 - 192294377 AGAAAGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012013022v1 9028957 8 - 10413719 AGAAAGCC i macNem1.NW_012013022v1 C 0 N 0 s cerAty1.NW_012005081v1 70761 8 - 113584 AGAAAGCC i cerAty1.NW_012005081v1 C 0 C 0 s chlSab2.chr21 124183259 8 - 127223203 AGAAAGCC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 83833 8 - 148006 AGAAAGCC i manLeu1.NW_012100344v1 I 368 C 0 s colAng1.NW_012116633v1 821545 8 + 1536524 AGAAAGCC i colAng1.NW_012116633v1 C 0 N 0 s calJac3.chr2 1467811 8 + 204313951 AGAAAGCC i calJac3.chr2 C 0 C 0 s aotNan1.NW_018487315v1 6227604 8 - 15679484 AGAAAGCC i aotNan1.NW_018487315v1 C 0 C 0 e saiBol1.JH378167 190544 3 + 13147851 I e panPan2.chr7 56770011 20 + 162613886 I a score=1068378.000000 s hg38.chr3_KI270784v1_alt 55951 263 + 184404 TGTGTATAAATGAGCAGTGAGATATTCAAGCACAGCAC--ACACACACTTCTCAGGACAGCTGTCGTGAGTGTTCCATGCTCGTTTCCTTCTGGATACATCAGCAACTCACTCTGCTATGATC-CTGC--AATACAT--CTCATGTTAGAATTAGAGACATCTGggccaggcaca---gtggctgacg-cctgtaatcctaacactttgg--gaagccgaggcaggcag-atc-acctaaggtcaggagttcgagaccagcctggccaacatggtgaa s panTro5.chr1 222339722 263 + 228573443 TGTGTATAAATGAGCAGTGAGATATTCAAGCACAGCAC--ACACACACTTCTCAGGACAGCTGTCGTGAGAGTTCCATGCTCGTTTCCTTCTGGATACATCAGCAACTCACTCTGCTATGATC-CTGC--AATACGT--CTCATGTTAGAATTAGAGACATCTGggccaggcaca---gtggctgacg-cctgtaatcctaacactttgg--gaagccgaggcaggcag-atc-acctaaggtcaggagttcgagaccagcctggccaacatggtgaa i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015140v1 6385101 262 - 8676498 TGTGTATAAATGAGCAGTGAGATATTCAAGCACAGCAC--ACACACACTTCTCAGGACAGCTGTCGTGAGAGTTCCA-GCTCGTTTCCTTCTGGATACATCAGCAACTCACTCTGCTATGATC-CTGC--AATACAT--CTCATGTTAGAATTAGAGACATCTGggccaggcaca---gtggctgacg-cctgtaatcctaacactttgg--gaagccgaggcaggcag-atc-acctaaggtcaggagttcgagaccagcctggccaacatggtgaa i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46830264 263 - 99891981 TGTGTATAAATGAGCAGTGAGATACTCAAGCATAGCGC--ACACACACTACTCAGGACAGCTGTCGTGAGAGTTCTATGCTCACTTCCTTCTGGATACACCAGCAACTCACTCTGCTATGATC-CTGC--AATACAT--CTCATGTTAAAATTAGAGACATCTGgaccaggcaca---gtggctcacg-cctgtaatcccaacactttgg--gaggccgaggcaggtag-atc-acctgaggtcaggagttcgagaccagcctggacaacatggtgaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55136067 263 + 185818997 TGTGTATAAATGAGCAGTGAGGTATTCAAGCACAGCAC--ACACACACTACTCAGGGCAGCTGTTGTGAGAGTTCCATGCTCATTTCCTTGTGGATATACCAGCAACTCACTCTGCTATGATC-CTGC--AATACAT--TTCACGTTAGCATTAGAGACATCTGggccaggtgcg---atggctcaca-cctgaaataccaacactttgg--gaggccgaggcagacac-atc-acctgaggtcaggagttccaggccagaccggccaacatggtgaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127728444 263 - 192294377 TGTGTATAAATGAGCAGTGAGGTATTCAAGCACGGCAC--ACACACACTACTCAGGGCAGCTGTTGTGAGAGTTCCATGCTCATTTCCTTGTGGATATACCAGCAACTCACTCTGCTATGATC-CTGC--AATACAT--TTCACGTTAGCATTAGAGACATCTGggccaggtgcg---atggctcaca-cctgaaataccaacactttgg--gaggccgaggcagacac-atc-acctgaggtcaggagttccaggccagaccggccaacatggtgaa i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 70769 274 - 113584 TGTGTATAAATGAGCAGTGAGATATTCAAGCACAGCAC--ACACACACTTCTCAAGACAGCTGTCGTGAGAGTTCCATGCTCATTTCCTTCCGGATACATCAGCAACATCATCTGCTATGATCTCTGCCAAGTACATCCTCCATGTTAAAATTAGAGACATCTGGGCTTgg-gcacacgtggctcatgccctgtaatcctaacactttggaaaagccagaggcaggcag-atcaacctaaggtcaggagttcgagaccagcctggcaaatatggtgaa i cerAty1.NW_012005081v1 C 0 I 1077 s chlSab2.chr21 124183267 263 - 127223203 TGTGTATAAATGAGCGGTGAGGTATTCAAGCACAGCAC--ACACACACTACTCAAGGCAGCTGTTGTGAGAGTTCCATGCTCATTTCCTTGTGGATATACCAGCAACTCACTCTGCTATGATC-CTGC--AATACAT--CTCACGTTAGCTTTAGAGACATCTGggccaggcaca---gtggctcatg-cctgtaatcccaacactttgg--gaggccgaggcagacac-atc-acctgaggtcaggagttccaggccagaccggccaacatggtgaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 83841 262 - 148006 TGTGTATAAATGAGCAGTGAGGTATTCAAGCACAGCAC--ACACACACTACTCAGGCCAGCTGTTGTGAGAGTT-CATGCTCATTTCCTTGTGGATATACCAGCAACTCACTCTGCTATGATC-CTGC--AATACAT--CTCACGTTAGCATTAGAGACATATGCgcccggcgcg---atggctcaca-cctgtaataccaacactttgg--gaggccgaggcagacac-atc-acctgaggtcaggagttccaggccagaccggccaacatggtgaa i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1467819 260 + 204313951 TGTGTATAAATGACCTGTGAGATATTCAAACACAGCAA--ACACACACAACTCAAGACAGCTGTTGTGAGAGTTCCATGCTCATTTCCTTGTGGATACGCCAGCAACTCATT---CTATGATC-CTCT--GATAAAC--CTCATGTTAGAATTAGAGACATCTGggtcaggcac----gtgactcaca-actgtaatcccaatagtttgg--gaagccaaggcaggcagaatc-acctgaggtcaggagttcaagaccagcctggccaacatggtgaa i calJac3.chr2 C 0 C 0 s aotNan1.NW_018487315v1 6227612 262 - 15679484 TGTATATAAATGACCAGTGAGATATTCAAGCACAGAAAACACACACACAACTCAAGACAGCCGTTGTGAGAGTTCCATGCTCATTTCCTTGTTGATACGCCAGCAACTCATT---CTATGATC-CTCT--GATAAAT--CTCATGTTAGAATTAGAGACATCTGGGTCAGACAC----gtgactcaca-cctgtaatcccaacagtttgg--gaagccgaggcaggcagaatc-acctgaggtcaggagttcaagaccagcctggccaacatggtgaa i aotNan1.NW_018487315v1 C 0 C 0 e saiBol1.JH378167 190544 3 + 13147851 I e panPan2.chr7 56770011 20 + 162613886 I a score=597619.000000 s hg38.chr3_KI270784v1_alt 56214 175 + 184404 atgctgtctctaccaaaaataca-aaaaattagctgggcatggtggcgcgcgcctgtaatcccagctactcgggagcctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagatcgtgccactgcactccagcatgggggacggagcaaggctctgtc s panTro5.chr1 222339985 175 + 228573443 acgctgtctctaccaaaaataca-aaaaattagctgggcatggtggcatgcgcctgtaatcccagctactcgggagcctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccgagatcgtgccactgcactccagcatgggggatggagcaaggctctgtc i panTro5.chr1 C 0 I 2 s gorGor5.CYUI01015140v1 6385363 173 - 8676498 acgctgtctctaccaaaaataca-aaaaattagctgggcatggtggcgtgc-cctgtaatcccagctactcgggagcctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccgagatcgtgccactgcactcc-gcatgggggacagagcaaggctctgtc i gorGor5.CYUI01015140v1 C 0 I 11 s nomLeu3.chr17 46830527 174 - 99891981 acgctgtctgtatcgaaaatac--aaaaattagcctggcgtggtggcgcgtgcctataatcccagctactcggaagcctgaggcagaagaatcgcttgaacctgggaggtggaggttgcagtgagctgagatcatgccactgcactccagcctgggtgacagagcaagactctgtc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55136330 176 + 185818997 acaccatctctatcaaaaaaatacaaaaattagccaggtgtggtggcacgtgcctgtaatcccagctactcaggagcctgaggcaggagaatcccttgaacccaggaggtagaggttgcagtgagccgagattatgccactgcactccagcctgggcgacagagcaaggctccatc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127728707 176 - 192294377 acaccatctctatcaaaaaaatacaaaaattagccaggtgtggtggcacgtgcctgtaatcccagctactcaggagcctgaggcaggagaatcccttgaacccaggaggtagaggttgcagtgagccgagattatgccactgcactccagcctgggcgacagagcaaggctccatc i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124183530 176 - 127223203 acgccatctctatcaaaaaaatacaaaaattagccaggcatggtggcacgtgcctgtaatcccagctactcaggagcctgaggcaggagaatcccttgaacccgggaggtagaggttgcagtgagccgagattatgccactgcactccagcctgggcgacagagcaaggctccatc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 84103 176 - 148006 acgccgtctctatcaaaaaaatacaaaaattagccaggtgtggtggcacgtgcctgtaatcccagctactcaggagcctgaggcaggagaatcccttgaacccgggaggtagaggttgcagtgagccgagattatgccactgcactccagcctgggcgacagagcaaggctccatc i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1468079 176 + 204313951 accccatctctatcaaaaatacaaaaaaattagcctggcatggctgcacatgtctgtgctcccagctactcgggagcctgaggcaggagaattgcttgaacctggaaggtggaggttgcagtgagctgagaccatgccactgccttccagcctggaagacagaggaacactctgtc i calJac3.chr2 C 0 I 21 s aotNan1.NW_018487315v1 6227874 174 - 15679484 accccatctctaccaaaaatac--aaaaattagccaggcatggtcgcacacatctgtactcccagctactcgggagcctgaggcaggagaattgcctgaatctggaaggtagaggttgcagtgagctgagaccatgccactgccctccagcctggaagacagagcaagactctgtc i aotNan1.NW_018487315v1 C 0 I 28 e cerAty1.NW_012005081v1 71043 1077 - 113584 I e saiBol1.JH378167 190544 3 + 13147851 I e panPan2.chr7 56770011 20 + 162613886 I a score=-12875.000000 s hg38.chr3_KI270784v1_alt 56389 17 + 184404 aaaaaaaaaaaaacaga s panTro5.chr1 222340162 17 + 228573443 aaaaaaaaaaaaacaga i panTro5.chr1 I 2 C 0 s gorGor5.CYUI01015140v1 6385547 17 - 8676498 aaaaaaaaaaaaacaga i gorGor5.CYUI01015140v1 I 11 C 0 s nomLeu3.chr17 46830701 8 - 99891981 ---------tcccccca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55136506 1 + 185818997 ----------------t i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127728883 1 - 192294377 ----------------t i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124183706 1 - 127223203 ----------------t i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 84279 1 - 148006 ----------------t i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1468276 7 + 204313951 --AAAAAAA-------- i calJac3.chr2 I 21 C 0 e aotNan1.NW_018487315v1 6228048 28 - 15679484 I e cerAty1.NW_012005081v1 71043 1077 - 113584 I e saiBol1.JH378167 190544 3 + 13147851 I e panPan2.chr7 56770011 20 + 162613886 I a score=44342.000000 s hg38.chr3_KI270784v1_alt 56406 23 + 184404 aaaagaaaaagaaaaAAGAATTA s panTro5.chr1 222340179 23 + 228573443 aaaagaaaaaGAAAAAAGAATTA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01015140v1 6385564 23 - 8676498 aaaagaaaaagaaaaaaGAATTA i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46830709 23 - 99891981 ccaaaaaaaagaaaaaagaaTTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55136507 21 + 185818997 c--aaaaaaaaaagagagaaTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127728884 21 - 192294377 c--aaaaaaaaaagagagaaTTA i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124183707 23 - 127223203 caaaaaaaaaaaagagagaaTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 84280 23 - 148006 caaaaaaaaaaaagagagaaTTA i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1468283 5 + 204313951 ------------------AATTC i calJac3.chr2 C 0 C 0 s aotNan1.NW_018487315v1 6228076 23 - 15679484 aaaacaaaaaaaaaaCACAATTA i aotNan1.NW_018487315v1 I 28 C 0 e cerAty1.NW_012005081v1 71043 1077 - 113584 I e saiBol1.JH378167 190544 3 + 13147851 I e panPan2.chr7 56770011 20 + 162613886 I a score=105727.000000 s hg38.chr3_KI270784v1_alt 56429 27 + 184404 GAGACATCTGGATCAAATCAGCTG-------------CCA s panTro5.chr1 222340202 27 + 228573443 GAGACATCTGGATCAAATCAGCTG-------------CCA i panTro5.chr1 C 0 C 0 s panPan2.chr7 56770031 40 + 162613886 GNGACATCTGGATCAAATCAGCTGCCACTGTCATCTTCCA i panPan2.chr7 I 20 C 0 s gorGor5.CYUI01015140v1 6385587 27 - 8676498 GAGACATCTGGATCAAATCAGCTG-------------CCA i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46830732 40 - 99891981 GAGACATCTGGATCAAATCAGCTGCCACTGTCATCTTCTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55136528 40 + 185818997 GAGACAAATGGATCAAATCAGCTGCCACCATCATCTTCTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127728905 40 - 192294377 GAGACAAATGGATCAAATCAGCTGCCACCATCATCTTCTA i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124183730 40 - 127223203 GAGACAAATGGATCAAATCAGCTGCCACCATCATCTTCTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 84303 40 - 148006 GAGACAAATGGATCAAATCAGCTGCCACCATCATCTTCTA i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1468288 27 + 204313951 CAGACATCTGGATCAAATAAGCTGCCA------------- i calJac3.chr2 C 0 I 2 s aotNan1.NW_018487315v1 6228099 27 - 15679484 GAGACATCTGGATCAAATCAGCTGCCA------------- i aotNan1.NW_018487315v1 C 0 I 188 e cerAty1.NW_012005081v1 71043 1077 - 113584 I e saiBol1.JH378167 190544 3 + 13147851 I a score=169842.000000 s hg38.chr3_KI270784v1_alt 56456 51 + 184404 GTC----------TCGCAAAGTGTCGGGTAACATCCTATTAAGCTTGCTGCTTACACATCA s panTro5.chr1 222340229 51 + 228573443 GTC----------TCGCAAAGTGTCGGATAACATCCTATTAAGATTGCTGCTTACGCATCA i panTro5.chr1 C 0 C 0 s panPan2.chr7 56770071 51 + 162613886 GTC----------CTGCAAAGAGTCAGATAACGTCCTATTAAGATTGCTGCTCACACATCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015140v1 6385614 51 - 8676498 GTC----------TCGCAAAGTGTCGGGTAACATCCTATTAAGATTGCTGCTTACACATCA i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46830772 51 - 99891981 GTC----------CTGAAAAGTGTCAGGTAACATCCTATTAAGATTGCGGCTCACATATCA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55136568 51 + 185818997 GTC----------CTGCAAAGTGTCAGGTAACGTCCTATTAAGATTGCTGCACACACATCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127728945 51 - 192294377 GTC----------CTGCAAAGTGTCAGGTAACGTCCTATTAAGATTGCTGCACACACATCA i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124183770 51 - 127223203 GTC----------CTGCAAAGTGTCAGGTAACGTCCTATTAAGATTGCTGCACACACATCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 84343 51 - 148006 GTC----------CTACAAAGTGTCAGGTAACGTCCTACTAAGATTGCTGCACACACATCA i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1468317 61 + 204313951 GTCATTTTCCAGTTCCCCAAGTGTCAGGTAATAACCTATTAAGATTGCTGCTCACACACCA i calJac3.chr2 I 2 C 0 e aotNan1.NW_018487315v1 6228126 188 - 15679484 I e cerAty1.NW_012005081v1 71043 1077 - 113584 I e saiBol1.JH378167 190544 3 + 13147851 I a score=235016.000000 s hg38.chr3_KI270784v1_alt 56507 64 + 184404 TCTATAAAATACTGAAAATATCATTTTAAGAA----ATCttttttttattttgagacagagttttgct s panTro5.chr1 222340280 64 + 228573443 TCTATAAAATACTGAAAATATCATTTTAAGAA----ATCttttttttattttgagacagagttttgct i panTro5.chr1 C 0 C 0 s panPan2.chr7 56770122 63 + 162613886 TCTATAAAATACTGAAAATATCATTTTAAGAA----ATC-ttttttaattttgagagggagtttcgct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015140v1 6385665 64 - 8676498 TCTATAAAATACTGAAAATATCATTTTAAGAA----ATCttttttttattttgagacagagttttgct i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46830823 64 - 99891981 TCAATAAAATACTGAAAATATCATTTTAAGAA----ATCTTTTTTTAATTTTGAGACGCAGTTTTGCT i nomLeu3.chr17 C 0 I 138 s rheMac8.chr3 55136619 68 + 185818997 TCTATAAAATACTGAAAATATCATTTTAGGAAttttttttttttttaattttgagatggagtttcatt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127728996 68 - 192294377 TCTATAAAATACTGAAAATATCATTTTAGGAAttttttttttttttaattttgagatggagtttcact i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124183821 65 - 127223203 TCTATAAAATACTGAAAATATCATTTTAGGAA---tttttttttttaattttgagatggagttttact i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 84394 66 - 148006 TCTATAAAATACTGAAAATATCATTTTAGGAA--ttttttttttttaattttgagatggagtttcact i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1468378 61 + 204313951 TCTAT-AAATACTGAAAATATCATTTTAAGAA----Attttatttt--ttttgagatggagtatggct i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 190547 62 + 13147851 tctATAAAATACTGAAAATTTCATTTTAAGCA----Attttatttt--ttttgagatagaatatggct i saiBol1.JH378167 I 3 C 0 e aotNan1.NW_018487315v1 6228126 188 - 15679484 I e cerAty1.NW_012005081v1 71043 1077 - 113584 I a score=455670.000000 s hg38.chr3_KI270784v1_alt 56571 114 + 184404 c---gttgcccaggctggagtgcaatggtgcgatctcagctcactgcaatctctgccccctgggttcaagcaattctccttcctcagcctcctgagtagctgggattacaggcatgc s panTro5.chr1 222340344 114 + 228573443 c---gttgcccaggctggagtgcaatggtgcgatctcagctcactgcaacctctgccccctgggttcaagcaattctgcttcctcagcctcctgagtagctgggattacaggcatgc i panTro5.chr1 C 0 C 0 s panPan2.chr7 56770185 116 + 162613886 ct-tgttgcccaggctggagtgcaatggcctgatctgggctcaccgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgagtagctaggattacaggcatgc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015140v1 6385729 114 - 8676498 c--tgttgcccaggctggagtgc-atggtgcgatctcagctcactgcaacctctgccccctgggttcaagcaattctccttcctcagcctcctgagtagctgggattacaggcatgc i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46831025 114 - 99891981 ---tgtcacccaggctggagcacagtggcatgatctctgctcactgcaacctctgcctcccaggttcaagcgattctcatgcctcagcctcctgagaagctgggattacaggtgccc i nomLeu3.chr17 I 138 C 0 s rheMac8.chr3 55136687 116 + 185818997 -cttgttgcccaagctggaatgcaacggcctgttctcggctcactgcaacctccgcctcctgggttcaagcaattctgctgcttcagcctcccgagtagctgggattacaggcatgc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127729064 116 - 192294377 -cttgttgcccaagctggaatgcaacggcctgttctcggctcactgcaacctccgcctcctgggttcaagcaattctgctgcttcagcctcccgagtagctgggattacaggcatgc i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124183886 116 - 127223203 -cttgttgcccaagctggaatgcaacggcctgttcttggctcactgcaacctccgcctcctgggttcaagcaattctgctgcctcagcctcccgagtagctgggattacaggcatgc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 84460 116 - 148006 -cttgttgcccaagctggaatgcaacggcctgttctcggctcactgcaacctccgcctcctgggttcaagcaattctgctgcctcagcctcccgagtagctgggattacaggcatgc i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1468439 115 + 204313951 -ctttttgcctaggctggagtgcaatggtgcgatctcagttcactgcaacttctgcctcc-gggttcaagcaattctcctgcctcagcctactgagtagctgggattaaaggcatgc i calJac3.chr2 C 0 I 418 s saiBol1.JH378167 190609 114 + 13147851 -c-ttttgcccaggctgaaatgcaatggtgcgatctcagctcactgcaacctccgcctcc-gggttcaatcaattctcctgcctcagcctactgagtagctggggttaagggcatgc i saiBol1.JH378167 C 0 C 0 e aotNan1.NW_018487315v1 6228126 188 - 15679484 I e cerAty1.NW_012005081v1 71043 1077 - 113584 I a score=64639.000000 s hg38.chr3_KI270784v1_alt 56685 19 + 184404 accaccacgcctggctaat s panTro5.chr1 222340458 19 + 228573443 accaccacgcctggctaat i panTro5.chr1 C 0 C 0 s panPan2.chr7 56770301 19 + 162613886 accaccacacttcattaat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015140v1 6385843 19 - 8676498 accaccacgcctggctaat i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46831139 19 - 99891981 accaccacaccaggctaat i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55136803 19 + 185818997 accaccatgtctgtttaat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127729180 19 - 192294377 accaccatgtctgtttaat i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124184002 19 - 127223203 accaccatgtctgtttaat i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 84576 19 - 148006 accaccatgtctgtttaat i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1468972 19 + 204313951 accaccacacctggccAAG i calJac3.chr2 I 418 I 107 s saiBol1.JH378167 190723 19 + 13147851 atcactacacccagctaat i saiBol1.JH378167 C 0 C 0 e aotNan1.NW_018487315v1 6228126 188 - 15679484 I e cerAty1.NW_012005081v1 71043 1077 - 113584 I a score=397010.000000 s hg38.chr3_KI270784v1_alt 56704 118 + 184404 tt-------------tgtattttcagttgagacagggtttctccatattggtcaggctggtctcgaactcctgacctcaggtgatccactgaccttggcctccc-aaagtgctgggattacaggtgtgagcc s panTro5.chr1 222340477 118 + 228573443 tt-------------tgtattttcagtagagacagggtttctccatattggtcaggctggtctcaaactcctgacctcaggtgatccactgaccttggcctccc-aaagtgctgggattacaggtgtgagcc i panTro5.chr1 C 0 C 0 s panPan2.chr7 56770320 119 + 162613886 tt-------------tgtatttttagtagagacagggtttctccatgttggtcaggctggtcttgaactcccaacttcaggtgatccacccacctcagcctcccaaaagtgctgggattacaggcgtgagcc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015140v1 6385862 118 - 8676498 tt-------------tgtattttcagtagagacagggtttctccatattggtcaggctggtctcgaactcctgacctcaggtgatccactgaccttggcctccc-aaagtgctgggattacaggtgtgagcc i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46831158 131 - 99891981 ttttttttatatatatatattcttagtagagatggtgttacatcatgttgcccaggcttgtctcaaactactgatgtcaagtgatccacccgcctccgcttccc-aaagtgctgggattacaggcgtgagcc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55136822 117 + 185818997 tt-------------tgtatttttagaagaggcagggtttctccatgttggtcaggctggtcttgaactcccgacttcaggtgat-cacccaccttggcctccc-aaagtgctggaattacaggtgtgagcc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127729199 117 - 192294377 tt-------------tgtatttttagaagaggcagggtttctccatgttggtcaggctggtcttgaactcccgacttcaggtgat-cacccaccttggcctccc-aaagtgctggaattacaggtgtgagcc i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124184021 117 - 127223203 tt-------------tgtatttttagaagaggcagggtttctccatgttggtcaggctggtcttgaactcccgacttcaggtgat-cacccaccttggcctccc-aaagtgctggaattacaggtgtgagcc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 84595 117 - 148006 tt-------------tttatttttagaagaggcagggtttctccatgttggtcaggctggtcttgaactcccgacttcaggtgat-cacccaccttggcctccc-aaagtgctggaattacaggtgtgagcc i manLeu1.NW_012100344v1 C 0 C 0 s saiBol1.JH378167 190742 118 + 13147851 tt-------------tgtaattttagtagagatggggtttctccatgttggtcaggctggtctcaaactaccgacctcaggtgatccgcccatctcagcctgac-aaagtgctgggattacaggtgtgaacc i saiBol1.JH378167 C 0 C 0 e aotNan1.NW_018487315v1 6228126 188 - 15679484 I e calJac3.chr2 1468991 107 + 204313951 I e cerAty1.NW_012005081v1 71043 1077 - 113584 I a score=844140.000000 s hg38.chr3_KI270784v1_alt 56822 233 + 184404 accatgcctagccAA------GAAACCCTTATTTTAA---AACA------Agccaggcgcggtggctcatgcctataatcccagcactttgggaagccaaggcaggtggatcacttgac-gtcagtagtttgagaccagcccgggcaacatgttgtaaccccatctctactaaaaat--------atattt-------taaaaattagctgggcatggtggtgggcacctgtaatcccagcttctcaggaggctgaggcaggag s panTro5.chr1 222340595 234 + 228573443 accatgcctagccAA------GAAACCCTTATTTTAA---AACA------Agccaggcgcggtggctcatgcctataatcccagcactttggggagccaaggcgggtggatcacttgactatcagtagtttgagaccagcctggacaacatgttgtaaccccatctctactaaaaat--------atattt-------aaaaaattagctgggcgtggtggtgggcacctgtaatcccagcttctcaggaggctgaggcaggag i panTro5.chr1 C 0 C 0 s panPan2.chr7 56770439 242 + 162613886 accgcgcctggccAA------GAAATCCTTCTTTAAAG--AAAA------ggccaggctcggtggttcacgactataatttcagcactttgggaggccaaggtgggtggatcacttgag-gtcagtagtttgagaccagcctgggcaacatgatgtaaccccatctctactaaaaataaaaaaacaaacaa-------aaaaaattagccgggtgtagtggtgggcacctgtaatcccagcttctcaggaggctgaggcaggag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015140v1 6385980 230 - 8676498 accatgcctagccAA------GAAACCCTTATTTGAA---AACA------Agccaggcgc-gtggctcatgcctataatcccagcactttgggaagccaaggcgggtggatcacttgac-gtcagtagtttgagaccagcctgggcaacatgttgtaaccccatctctactaaaaat--------atattt-------aaaaaattagctggg-gtggtggtgggcacctgtaatccc-gcttctcaggaggctgaggcaggag i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46831289 240 - 99891981 actgcgcctggACAA------GAAATCTTTATTTAAA---AACA------ggccaggtgcagtggctcacgcctgtaatcccagcactttgggaagcggaggcgggtggatcacttgac-atcagtagtttgagacaagcctgggcaacatgatgtaacaccatctctactaagaat--------atatatatataaaaaaaaattagcctggtgtggtggtgggcacctgtaatcccagcttctcaggaggctgaggcatgag i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55136939 237 + 185818997 accacgcctggccAA------GAAATCCTTATTTTAAA--AAAA------ggccaggctcagtggctcacgcctataatttcagtactttgggaggccaaggcaggtgaatcacgtcag-gtcagtagtttgagaacagcctgggcaacatgatgtaatcccatctctactaaaaat-----aataattta-------aaaaaattagctgggtgtggtggtgggcacctgtaatcccagcttctcaggaggctgaggcaggag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127729316 237 - 192294377 accacgcctggccAA------GAAATCCTTATTTTAAA--AAAA------ggccaggctcagtggctcacgcctataatttcagtactttgggaggccaaggcaggtgaatcacgtcag-gtcagtagtttgagaacagcctgggcaacatgatgtaatcccatctctactaaaaat-----aataattta-------aaaaaattagctgggtgtggtggtgggcacctgtaatcccagcttctcaggaggctgaggcaggag i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124184138 237 - 127223203 accacgcctggccAA------GAAATCCTTATTTTAAA--AAAA------ggtcaggctcagtggctcacgcctataatttcagtactttgggaggccaaggcgggtgaatcacttcag-gtcagtagtttgagaacagcctgggcaacatgatgtaatcccatctctactaaaaat-----aataattta-------aaaaaattagccaggtgtggtggtgggcacctgtaatcccagcttctcaggaggctgaggcaggag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 84712 237 - 148006 accacgcctggccAA------GAAATCCTTATTTTAAA--AAAA------ggccaggctcagtggctcacgcctataatttcagtactttgggaggccaaggcgggtgaatcacttcag-gtcagtagtttgagaacagcctgggcaacatgatgtaatcccatctctactaaaaat-----aataattta-------aaaaaattagccgggtgtggtggtgggcacctgtaatcccagcttctcaggaggctgaggcaggag i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1469098 254 + 204313951 acca-gcctgaccaacatggtgaaaccccgtcttaaaaaGAAAACAACAACActgggctcagtggctcacacctataatctcagcacttagggaggctgaagtgggtgtatcacttgac-gtcaagagtttgagacaggcccgggcatcatgatgaaaccccatctctactaaaaaa-tacaaaaaaagaa-------aaaaaattagccatgtgttgtggtgggcacctgtaatcccagcttctcaggaggctgaggcaggag i calJac3.chr2 I 107 C 0 s saiBol1.JH378167 190860 229 + 13147851 accacacctggccAA------GAAATCTTTATTTAAA---AACACACTGGggccaggcatggtggctcacacctgtaatctaagcactt-tggaagctaaggtgggcagatcacctgag-gtcaggagttcaagaccagcatgaccaacatggtgaaacccagtctt-----------------aaaaaaa-------aaaaaaCTggccaggcacagtggctcaagcctgtaatcccagcactttgggagggtggatcatgag i saiBol1.JH378167 C 0 I 806 e aotNan1.NW_018487315v1 6228126 188 - 15679484 I e cerAty1.NW_012005081v1 71043 1077 - 113584 I a score=313022.000000 s hg38.chr3_KI270784v1_alt 57055 116 + 184404 aaccacttgaacctgggaggtggaggttgcagtgagcggagatcatgccactgcactctagcctgggtgacaatagaaagactccatctc--aaaaacaaaacaaaacaaaacaaaac s panTro5.chr1 222340829 111 + 228573443 aatcacttgaacctgggaggtggaggttgcagtgagtggagatcacgccactgcactctagcctgggtgacaacagaaagactccatctc--a-----aaaacaaaacaaaacaaaac i panTro5.chr1 C 0 C 0 s panPan2.chr7 56770681 105 + 162613886 aatcgcttaaacctgggaggcggaggttgcagtgagtggagatcatgccactgcactccagcctgggcaacaacagcaagactccatctc--a-----aaaa------aacacaaaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015140v1 6386210 111 - 8676498 aatcacttgaacctgggaggtggaggttgcagtgagtggagatcatgccactgcactccagcctgggtgacaatagaaagactccatctc--a-----aaaacaaaacaaaacaaaac i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46831529 104 - 99891981 aatcgcttgaacctgggaggcagaggttgcagtgagcagagatcatgccactgtgctccagcctgggtgacaacagcgagactccatcgc--a-----aaa-------aaaccaaaaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55137176 105 + 185818997 aatctcttgaatctgggaggcggaggtggcagtgagtggagatcatgccactgcactctagcctgggcaacaat-gcaaaacttcatctcaaa-----aaa-------aaaacaaaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127729553 105 - 192294377 aatctcttgaatctgggaggcggaggtggcagtgagtggagatcatgccactgcactctagcctgggcaacaac-gcaaaacttcatctcaaa-----aaa-------aaaacaaaaa i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124184375 103 - 127223203 aatctcttgaatctgggaggcggaggtggcagtgagtggagatcatgccactgcactctagcctgggcaacaac-acaaaacttcatctc--a-----aaa-------aaaacaaaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 84949 103 - 148006 aatctcttgaatctgggaggtggaggtggcagtgagtggagatcatgccactgcactctagcctgggcaacaac-gcaaaacttcatctc--a-----aaa-------aaaacaaaaa i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1469352 95 + 204313951 aattgcttcaacctgggtagaggagattgcagtgaacagagatcatgccactacactccagcctgagcaaccacagtgagactccaactc--a-----aag-------a--------- i calJac3.chr2 C 0 C 0 e aotNan1.NW_018487315v1 6228126 188 - 15679484 I e cerAty1.NW_012005081v1 71043 1077 - 113584 I e saiBol1.JH378167 191089 806 + 13147851 I a score=58940.000000 s hg38.chr3_KI270784v1_alt 57171 49 + 184404 aaaaAACCACTAAAAAAAAGACTCCATTTc-aaaaacaaaa-ctaaaacca s panTro5.chr1 222340940 49 + 228573443 aaaaaaCCACTAAAAGAAAGACTCCATTTc-aaaaacaaaa-ctaaaacca i panTro5.chr1 C 0 C 0 s panPan2.chr7 56770786 39 + 162613886 caaaaaC-----------AGACTCCATCTC-aaaaaaaaaatcaaaaaaca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015140v1 6386321 49 - 8676498 aaaaaaCCACTAAAAAAAAGACTCCATTTc-aaaaacaaaa-ctaaaacca i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46831633 33 - 99891981 caaaaaC-----------AGACTCCATTTa-aaaaa------acaaaaaca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55137281 35 + 185818997 caaaaaC-----------AGACTCCATCTC-aaaaa--aaa-tcaaaaac- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127729658 35 - 192294377 caaaaaC-----------AGACTCCATCTC-aaaaa--aaa-tcaaaaac- i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124184478 36 - 127223203 caaaaac-----------agactccatctcaaaaaa--aaa-tcaaaaac- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 85052 35 - 148006 caaaaaC-----------AGACTCCATCTC-aaaaa--aaa-tcaaaaac- i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1469447 21 + 204313951 --------------aaaaagactccatcta-aaaaa--------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 191895 30 + 13147851 -AAAAAA----AAAAAAAAGACTCCATGTA-AAAAA--------------- i saiBol1.JH378167 I 806 C 0 e aotNan1.NW_018487315v1 6228126 188 - 15679484 I e cerAty1.NW_012005081v1 71043 1077 - 113584 I a score=97271.000000 s hg38.chr3_KI270784v1_alt 57220 29 + 184404 aaaac-acaacacaa-aTGTAGTACACAAAT s panTro5.chr1 222340989 29 + 228573443 aaaac-acaacacaa-aTGTAGTATACAAAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 56770825 30 + 162613886 aaaacaaaaaaacaa-aTGTGGTATGGAAAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015140v1 6386370 29 - 8676498 aaaac-acaacacaa-aTGTAGTATACAAAT i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46831666 29 - 99891981 aaaac-aaaacacaa-aTGTGGTATGGAAAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55137316 29 + 185818997 aaaac-aaaaaacaa-aTGTGGTATGGAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127729693 29 - 192294377 aaaac-aaaaaacaa-aTGTGGTATGGAAAT i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 72120 29 - 113584 AAAAC-AAAACACAA-ATGTGGTATGGGAAT i cerAty1.NW_012005081v1 I 1077 C 0 s chlSab2.chr21 124184514 29 - 127223203 aaaac-aaaaaacaa-aTGTGGTATGGAAAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 85087 29 - 148006 aaaac-aaaaaacaa-aTGTGGTATGGAAAT i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1469468 17 + 204313951 -------------aa-aTGTGGTATGGCAAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 191925 18 + 13147851 -------------AACACGTGGTATGGCAAA i saiBol1.JH378167 C 0 C 0 e aotNan1.NW_018487315v1 6228126 188 - 15679484 I a score=2830251.000000 s hg38.chr3_KI270784v1_alt 57249 466 + 184404 GAAAATAATTACTGTGTTAAACACAGTTTCATAGAAAATAAAAGACCAATCAAATacaataagctgcctttttagatgggta----tgttattcttctttcacagctaaagaaacaggctcagagaatgttatttgattggaccGTGTTGCA--TTTCTGGACAGTGCAGCTGAGATCAGACTTTGTGTGTAACTCCACTAGCCTACCAGGGTGCCTCTCATAAAGGTAAGAAATGTAAATTTGGCCTAATATACAAAGTTGCCAGGGCAGCACTGGGTCAATTCTACATACAGTACTTCTATGTTCATCAAGGGAAAC--------------------CTTAAGGGAAAGTGAAAATGCTTCTAGAAGGCGACTGGACACCAGCGCCTTTGCTTGTTGCCTTTGGGCTCTTCTTCTAAGGCCAACAGTGACCTGAAATTATTGACTGGCTTTTCCAATCAAGTGGACAAAATGGTACCAAGGTCGCCAACA s panTro5.chr1 222341018 464 + 228573443 GAAAATAATTACTGTGTTAAACACAGTTTCATAGAAAATAAAAGACCAATCAAATacaataagctgcctttttagatggg------tgttattcttctttcacagctaaagaaacgggctcagagaatgttatttgattggaccGTGTTGCA--TCTCTGGACAGTGCAGCTGAGATCAGACTTTGTGTGTAACTCCACTAGCCTACCAGGGTGCCTCTCATAAAGGTAAGAAATGTAAATTTGGGCTAATATACAAAGTTGCCAGGGCAGCACTCGGTCAATTCTACATACAGTACTTCTATGTTCATCAAGGGAAAC--------------------CTTAAGGGAAAGTGAAAATGCTTCTAGAAGGCGACTGGACACCAGCGCCTTTGCTTGTTGCCTTTGGGCTCTTCTTCTAAGGCCAACAGTGACCTGAGATTATTGACTGGCTTTTCCAATCAAGTGGACAAAATGGTACCAAGGTCGCCAACA i panTro5.chr1 C 0 C 0 s panPan2.chr7 56770855 451 + 162613886 GAAAA----TACTGTGTTAAAGACAGTTTCAT-GCAAATAAAAGACCACTCAAATACAATAAGCTGTCTTTTTagatgggtataattgttattcttatttaacagctaaagaaacaggctcagagaatgttatttgattGGACTGTGTTGCA--TCTCTGAACAGTGCAGCTGAGATCAGACTTCATGTGTAACTCCACTACCCTACCAGGATGCCTCTCATAAAGGTAAGAAATGTAAATTTGGCCTAATATACAAAGTTGCCAGGGCAGCACTGGGTCAGTTCTACATATAGTACTTCTACGTTCATCAACGGAAAC--------------------TTTAAGGGAAGGTGAAAACGCTTCTAGAAGGCGACTGGACACCAAC-------------GCCTTTGGGCTCTTCTTCTAAGGCCAATAGTGACCT-AAATTATTGACTGACTGCTTCAATCAAGTGGACAAAAAGGTACCAAGGCCGCCAACA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015140v1 6386399 465 - 8676498 GAAAATAATTACTGTGTTAAACACAGTTTCATAGAAAATAAAAGACCAATCAAATACAATAAGCTGCCTTTTTagatgggta----tgttattcttcttttacagctaaagaaacgggctcagagaatgttatttgattggaccGTGTTGCA--TCTCTGGACAGTGCAGCTGAGATCAGACTTTGTGTGTAACTCCACTAGCCTACCAGGGTGCCTCTCATAAAGGTAAGAATTGTAAATTTGGCCTAATATA-AAAGTTGCCAGGGCAGCACTGGGTCAATTCTACATACAGTACTTCTATGTTCATCAAGGGAAAC--------------------CTTAAGGGAAAGTGAAAATGCTTCTAGAAGGCGACTGGACACCAGCGCCTTTGCTTGTTGCCTTTGGGCTCTTCTTCTAAGGCCAACAGTGACCTGAAATTATTGACTGACTTTTCCAATCAAGTGGACAAAATGGTACCAAGGTCGCCAACA i gorGor5.CYUI01015140v1 C 0 C 0 s nomLeu3.chr17 46831695 468 - 99891981 GAAAATAATTACTGTGTTAAACACAGTTTCGTAGAAAATAAAAGACCACTCAAATACAATAaactgtctttttagatgggcataattgttattcttattttacagctaaagaaacaggctcagagaatgttatttgattggaccGTGTTACATCTCTCTGGACAGTGCAGCTGAGATCAGACTTCGTGTGTAATTCCACTAGCCTACCAGGGTGCCTCTCATAAAGGTAAGAAATGTAAATTTGGCCTAATATACAAAGTTGCCAGGGCAGCACTGGGTCAATTCTACATACAGTACTTCTATGTTCATCAAGGGACAC--------------------CTTAAGGGAAAGCGAAAATGCTACTAGAAGGCGACTGGACACCAGCACATTTGCTTGTTGCCTTTGGGCTC----TCTAAGACCAAAAGTGACCTGAAATTATTGACTGACTTTTCCAATCAAGTGGACGAAATGGTATCAAGGTCGCCAACA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 55137345 470 + 185818997 GAAAATAATTACTGTGTTAAAGACAGTTTCATAGAAAATAAAAGACCACTCAAATACAATAAGCTGTCTTTTTAGATGAGTATAattgttattcttactttacagctaaagaaacgggctcagagaatgttatttgattggaccgtgttgca--tctctggacagtgcagctgagatcagactgtgtgtgtaactccaCTAGCCTACCAGGGTGCCTCTCACAAAGGTAAAAAATGTAAATTTGGCCTAATATACAAAGTTGCCAGGGCAGCACTGGGTCAATTCTACATACACTACTTCTATGTTCATCAAGGGAAAC--------------------TTTAGGGGAAGGTGAAAATGCTTCTAGAAGGTAACTGGACACCAGCACCCTTGCTTGTTGCCTTTGGGCTCTTCTTCTAAGACCAATAGTAACCTGAAATTATTGACTGACTGCTCCAATGAAGTGGACAAAAGGGTACCAAGGTCGCCAACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 127729722 470 - 192294377 GAAAATAATTACTGTGTTAAAGACAGTTTCATAGAAAATAAAAGACCACTCAAATacaataagctgtctttttagatgagtataattgttattcttactttacagctaaagaaacgggctcagagaatgttatttgattggaccGTGTTGCA--TCCCTGGACAGTGCAGCTGAGATCAGACTGTGTGTGTAACTCCACTAGCCTACCAGGGTGCCTCTCACAAAGGTAAAAAATGTAAATTTGGCCTAATATACAAAGTTGCCAGGGCAGCACTGGGTCAATTCTACATACACTACTTCTATGTTCATCAAGGGAAAC--------------------TTTAGGGGAAGGTGAAAATGCTTCTAGAAGGTAACTGGACACCAGCACCCTTGCTTGTTGCCTTTGGGCTCTTCTTCTAAGACCAATAGTAACCTGAAATTATTGACTGACTGCTCCAATGAAGTGGACAAAAGGGTACCAAGGTCGCCAACA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012005081v1 72149 458 - 113584 GAAAATAATTACTGTGTTAAACACAGTTTCGTTGAAAATAAAAGACCACTCAAATACAATAGGCTGTCTTTTTagatgggta----tgttattcttattttaccgctaaagaaacgggcttagagaatgttacttgattggaccGTGTTGCA--TCTCTGGACAGTGCAGCTGAGATCAGACTTCATGTGTAACTCCACTAGCTTGCCAGGGTGCCTCTCATAAAGGTAAGAAATGTAACTTTGGCCTAACATACAAAGCTGCCAGGGCAGCACCGGGTCAATTCTACATAGATTACTTCTATGTTCGTCAAAGGAAAC--------------------CTTAAGGGAAGGTACAAATGCATCTATAAGGTGACTGGACACGAGCGCCTTTCCTTGTTGTCTTTGGGCTCTTCTTCTAAGGCCAACAGTGACCTGAAATT--------AATTTTCCAATCAAGTGGACAAAATGGTACGAAGGTCGCCAACA i cerAty1.NW_012005081v1 C 0 N 0 s chlSab2.chr21 124184543 468 - 127223203 GAAAATAATTACTGTGTTAAAGACAGTTTCATAGAAAATAAAAGACCACTCAAATacaataagctgtctttttagatgaatataattgttattcttactttacagctaaagaaacgggctcagagaatgttatttgattggaccGTGTTGCA--TCTCTGGACAGTGCAGCTGAGATCAGACTGTGTGTGTAACTCCACTAGCCTACCAGGGTGCCTCTCACAAAGGTAAAAAATGTAAATTTGGCCTAATATAC--AGTTGCCAGGGCAGCACTGTGTCAATTCTACATACAGTACTTCTATGTTCATCAAGGGAAAC--------------------TTTAAGGGAAGGTGAAAATGCTTCTAGAAGGTAACTGGACACCAGCACCCTTGCTTGTTGCCTTTGAGCTCTTCTTCTAAGACCAATAGTAACCTGAAATTATTGACTGACTGCTCCAATGAAGTGGACAAAAGGGTACCAAGGTCGCCAACA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012100344v1 85116 470 - 148006 GAAAATAATTACTGTGTTAAAGACAGTTTCATAGAAAATAAAAGACCACTCAAATACAATAAGCTGTCTTTTTAGATGAATATAattgttattcttactttacagctaaagaaacgggctccgagaatgttatttgattggaccgtgttgca--tctctggacagtgcagctgagatcagactgtgtgtgtaactccaCTAGCCTACCAGGGTGCCTCTCACAAAGGTAAAAAATGTAAATTTGGCCTAATATACAAAGTTGCCAGGGCAGCACTGGGTCAATTCTACATACACTACTTCTATGTTCATCAAGGGAAAC--------------------TTTAAGGGAAGGTGAAAATGCTTCTAGAAGGTAACTGGACACCAGCACCCTTGCTTGTTGCCTTTGGGCTCTTCTTCTAAGACCAATAGTAACCTGAAATTATTGACTGACTGCTCCAATGAAGTGGACAAAAGGGTACCAAGGTTGCCAACA i manLeu1.NW_012100344v1 C 0 C 0 s calJac3.chr2 1469485 468 + 204313951 GAAAATAATTACTGTGTTAAAGACAGTTTCATAGAAAATGAAAAACCACCAAAATACAATAAGCTGTCTTTTTATATGGGTATAattgttattcttattttacagctaaagaaacggactcagagaatgttatttgattgaaccatgttgca--tctctggacagtgcagctgaga-cagacttcgtgcataactccacttgtctaccagggcACCTCTCATAAAGGTAAGGCATGTATATTTGGCCCAATATACAAAGCTGCTGGGGAAGCACTGGGTCAACTCTACA-ACAGTACTTCCAAGTTTATCAAGGGAAAC--------------------CAGAAGGGAAGGTGAAAATGCTTCTAGAAGGCAACTGGACATCAGCGCCCTTGCTTGTTGCCTTTGGGCTCTTCCTCTAAGGCCAACAGTGACCTGAAATTCTTGACTGACAGTTCCAATCAACTGGAGAAAATGGTACCAAGGTCGCCAACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378167 191943 487 + 13147851 GAAAACAATTACTGTGTTAAAGACAGTTTCATAGAAAATGAAAAACCACCCAAATACAATAAGCTGTCTTTTTATAtgggtataattgttattcttattttacagctaaagaaacagactcagagaatgttatttgattgaaccatgttgca--tctctggacagtgcag-tgaga-cagacttcgtgcataactccacttgtctgccagggcACCTCTCATAAAGGTAAGGTATGTATATTTGGCCCAGTATACAAAGGTGCTGGGGAAGCACTGGGTCAACTCTACA-ACAGTACTTCCAGGTTCATCAAAGGAAGTACTTCCCTTAAGGTGAAGTACTTAAGGGAAGGTGAAAATGCTTCTAGAAGGCAACTAGACACCAGCGCCCTTGCTTGTCGCCTTTGGGCTCTTCCTCTAAGGCCAAGAGTGACCTGAAATTCTTGACTGACAGTTCCAATCAACTGGAGAAAATGGTGCCAAGGTCACCAACA i saiBol1.JH378167 C 0 C 0 s aotNan1.NW_018487315v1 6228314 469 - 15679484 GAAAACAATTACTGTGTTAAAGACAGTTTCATAGAAAATGAAAAACCACCCAAATACAATAAGCTGTCTTTTTATATGGGTATAattgttattcttattttacggctaaagaaacggactcagagaatgttatttgattgaaccgtgttgca--tctctggacagtgcagcagaga-cagatttcatgcataactccacttgtctaccagggcACCTCTCAGAAACGTAAGGCATGCATATTTGACCCAATATACAAACCTGCTGGGGAAGCACTGGGTCAATTCTACATACAGTACTTTCAAATTCATCAAGGGAAAC--------------------CTTAAGGGAAGGTGAAAATTCTTCTAGAAGGCAACTGGACACCAGCGCCCTTGCTTGTTGCCTTTGGGCTCTTCCTCTAAGGCCAACAGTGACCTGAAATTTTTGACTGACAGTTCCAATCAACTGGAGAAAATAGTACCAAGGTGGCCAACA i aotNan1.NW_018487315v1 I 188 C 0 a score=12606.000000 s hg38.chr3_KI270784v1_alt 57715 2 + 184404 TC s panTro5.chr1 222341482 2 + 228573443 TC i panTro5.chr1 C 0 N 0 s panPan2.chr7 56771306 2 + 162613886 TC i panPan2.chr7 C 0 N 0 s gorGor5.CYUI01015140v1 6386864 2 - 8676498 TC i gorGor5.CYUI01015140v1 C 0 N 0 s nomLeu3.chr17 46832163 2 - 99891981 TC i nomLeu3.chr17 C 0 N 0 s rheMac8.chr3 55137815 2 + 185818997 TC i rheMac8.chr3 C 0 N 0 s macFas5.chr3 127730192 2 - 192294377 TC i macFas5.chr3 C 0 N 0 s chlSab2.chr21 124185011 2 - 127223203 TC i chlSab2.chr21 C 0 N 0 s manLeu1.NW_012100344v1 85586 2 - 148006 TC i manLeu1.NW_012100344v1 C 0 N 0 s calJac3.chr2 1469953 2 + 204313951 TC i calJac3.chr2 C 0 N 0 s saiBol1.JH378167 192430 2 + 13147851 TC i saiBol1.JH378167 C 0 N 0 s aotNan1.NW_018487315v1 6228783 2 - 15679484 TC i aotNan1.NW_018487315v1 C 0 N 0 a score=2524.000000 s hg38.chr3_KI270784v1_alt 57717 12 + 184404 GATGTAG-AACAT s panTro5.chr17 4389 13 + 83181570 GATGTAGCAACAT i panTro5.chr17 N 0 C 0 s gorGor5.CYUI01000093v1 11911 12 - 2320194 GATGTAG-AACAT i gorGor5.CYUI01000093v1 N 0 C 0 a score=146847.000000 s hg38.chr3_KI270784v1_alt 57729 317 + 184404 CGATGTTCTACAACATTGCTTAACGCAAGGGGA--GACGCTCCTGACTCAGAGTGTTTAA-TTGCTCACCTACTTCTTTTTCTGCCCTCTTGGGCTTCTGAAATGAAAAGAACCCTGGGGTGATACAGTGAGTCAAAGGGGTG-CCAGCCGCATCACAGCAAAA-TAGATTCCTAAAAAATCCCTGGCCT-AAGATGACAGCCTT-GGCTGGATCAGTTTGAATGTG-CTGATAGTGGACATGGTAGAATGAAGGTGGTT-GAAATGTTCATATTAAAGAACTTCCACCCAGATTGCAAGAAAAGAGAGAAGAATGGAGACGGCAG s panTro5.chr17 4402 317 + 83181570 CGATGTTCTACAACATTGCTTAACGCAAGGGGAATGACGCTCCTGACTCAGAGTGTTTAAATTGCTCACCTACTTCTTT--CTGCC-TCTTGGGCTTCTGAAATGAAAAGAACC-TGGGGTGATACAGTGAGTCAAAGGGGTGGCCAGCCGCATCACAGCAAAAATAGATTCCTAAAA--TCCCTGGCCTTAAGATGACAGCCTTTGGCTGGATCAGTTTGAATGTGGCTGATAGTGGACATG-TAGA-TGAAGGTGGTTTGAAATGTTCATATTAAAGAACTTTCCACCAGATTGCAAGAAA-GAGACAGGAATGGAGATGGCAG i panTro5.chr17 C 0 I 17 s gorGor5.CYUI01000093v1 11923 317 - 2320194 CGATGTTCTACAACATTGCTTAACGCAAGGGGA--GACGCTCCTGACTCAGAGTGTTTAA-TTGCTCACCTACTTCTTTTTCTGCCCTCTTGGGCTTCTGAAATGAAAAGAACCCTGGGGTGATACAGTGAGTCAAAGGGGTG-CCAGCCGCATCACAGCAAAA-TAGATTCCTAAAAAATCCCTGGCCT-AAGATGACAGCCTT-GGCTGGATCAGTTTGAATGTG-CTGATAGTGGACATGGTAGAATGAAGGTGGTT-GAAATGTTCATATTAAAGAACTTCCACCCAGATTGCAAGAAAAGAGAGAGGAATGGAGATGGCAG i gorGor5.CYUI01000093v1 C 0 C 0 s nomLeu3.chr21 44635889 315 + 86207423 CGACATTCTACAACATTGCTTAACACAAGGGGA--GACGCTCCTGACTC--AGTGTTTAA-TTGCTCACCTACTTCTTTTTCTACCCTCTTGGGCTTCTAAAATGGAAAGGACCCAGGGGTGATACAGTGAGTCAAAGGGGTG-CCAGCCACGTCACAGCAAAA-TAGATTCCTAAAAAATCCCTGGCCT-AAGATGACAGCCTT-GCCTGGATAAGTTTGAATGTG-CTGATAGTGGACATGGTAGAATGAAGGTGGTT-GAAATGTTCATATCGAAGAACTTCCACCAAGATTGCAAGAAAAGAGAGAGGAATGGAGATGGCAG i nomLeu3.chr21 N 0 C 0 a score=2628.000000 s hg38.chr3_KI270784v1_alt 58046 17 + 184404 CACAAGCCCCTACAATA s gorGor5.CYUI01000093v1 12240 16 - 2320194 CACGAGCCCCTACAA-A i gorGor5.CYUI01000093v1 C 0 C 0 s nomLeu3.chr21 44636204 17 + 86207423 CAAGAGTCCCTATAATA i nomLeu3.chr21 C 0 C 0 e panTro5.chr17 4719 17 + 83181570 I a score=484146.000000 s hg38.chr3_KI270784v1_alt 58063 1094 + 184404 AAAGCAGATGTTTT-GA-GATCAGTTATATTTCTTCTGACAAAAATTAAAGACAGAAACCAAAGTTTAGCCTGAGACTACAATTAATTGGGCAATAAGCCAGAGGCACATATGGCATAAGACAGATTTAAACATTTCTCCCTGATATTAATACAAACACTAAAATTACAAATAC-ATGGATTCC--AAATAAAACAAATATTT-AAAAAATTTAATGAATAAACACTGGGGTCTACAGTAGTATTTGAAGGAGATCTCACAAACAGGTTTG-GTTTTTGAAGGTTAGAACTGGTGGTCTAGAGA-AT-TCATTTCATTCCAGAGAAAGAAAGAGAGGAATTTCTTGGGTTCCTTCAGGAATGCGTCTAGCTTTGCCTCATCTTTGTTTGAACTATGGATACGGCAGAAGAAAACATAAGGATTTCACAGATTTAAGTTGCAAAAAGTCAC-TGGGTTCTCTAAGAAGTCTGGGATTCTTCTGCTGGAAAAATAAGTTTGTTGAGAAAAAATGAGTTGGA-GGAGGCTGTTATTGAAGTGAAGCAGAATTGTTTTTACTAATCTGCTTATTACCCACTCTGTA-GTGTGGAAACAAATTATTCATGCACAAG-GTCCTCTTACTGTT-CCTAGAATGCAGTGGAAAGAGAACAGATTAGTTTTCCTCCCTCAGAACACAACCCCTAGAAACATCCTACCT--CAGATGAGATATTGCC-TAATTATTTTCAAAAGACAGTGAAAC--ATC-ATGGATGTAAA-TG-TTTGCTACAAAATAAATACATGCTAGA-AACAGAAGCATCTGGGTCA--CAGCTATATTAGAGCT--ACCTGTGTTCCCCTGTCACTGACATTAAAACAAAAATGTC-CAATACAATCATTCAC-AGCGTGGGAGAGGGGAAGTTGAAGGATGGAAAGGCCAGGCATAAAAGGATTTCAGAATTTCCGTCCATAAGGAAGTGGCTTTGTGCACTGTCTGTTACTGCGTGCAAGGTGAAATTTGAAGAATGAAAAC-GTGCAGTAACAAGGGC-TCCTTTGTCCAACTCACCTCTCCAG-ATACCAAG-TTTCAGACATGTTGCA-TTTGAATTGAAAGGTTGATATAATTTTTTTAAAAGAAC s panTro5.chr17 4736 1100 + 83181570 AAAGCAGATGTTTTTGATGATCAGTTATATTTCTTCTGAACAAAATTAAAGACAGAAACCAAAGTTTAGCCTGAGACTACAATTAAT--GGCAATAAGCCAGAGGCACA-ATGGCA-ATAACAGATTTAAACCTTCTCCGCTGATATTAATACAAACACTAAAATTACAAATACCATGGATTTCGCAAATAAAACAAATATTTTAAAAAATTTAATGAATAAACACTGGGGTCTACAGTAGTATTTGAAAGGGATCTCACAAACAGGTTTGCGTTTTTGAAG-TTAGAACTGGTGGTCTAGAGAGATGTCATTTCATTCCAGAGAA-GAAAGAGAGGAATT-CTTGG-TTCCTTCAGGAATGCGTCTACTTTGGCCTCATCTTTGTT-GAACTATG-ATACGGCAGAAGAAAACATGAGGATTTCACAGATTTACGGTGCAAAAAGTCACCTGGGTTCTCTAAGAAGTCTGGGATTCTTCTGGCTGAAAAATAAGTTTGTTGAGAAAAA-TGAGTTGGACGGAGGCTGTTAT-GAAGTGAAGCAGAATTGTTTTTACTAATCTGCTTAATACCCACTCTGTAAGTGTG-AAACAAATTATTCATGCACAAGAGTCCTCGTACTGTTTCCTAGAATGCAGTG-AAAGAGAACAGATTAGTTT-CCTCCCTCAGAACACAACC--TAGAAACAATCTACCTGTCAGATGAGATATTGCCGTAATTATTTTCAAA-GACAGTGAAAGCAATCGATGGATGTAAAATGCTTTGCTGCAAAATAAATACATGCTAGATAACAGAA-CATCTGG-TCAGACAGCTATATTAGAGCGTAATCTGTGTTCCCCTGTCACTGACATTAAAACAAAAATGTCGCAATACAATCATTCACGAGCATGAGAG---GGAAGTTAAAGGATGGAAAGGCCAGGCATAAAAGGATTTCAGAATTTCCATCCATAAGGAAGTGGCTTTGTGCACT-TCTGTTACTGCGTGCAAGG-GAAATTTGAAGAATGAAAACGGTGCAGTAACAAGGGCTTCCTTTGTCCAA-TCA-CTCTCCAGAATAGCAAGTTTTCAGACATGTTGCATTTTAAATTTGAAGGTTGATA-AATTTTTTTAAAGAAAC i panTro5.chr17 I 17 I 13 s gorGor5.CYUI01000093v1 12256 1090 - 2320194 AAAGCAGATGTTTT-GA-GATCAGTTATATTTCTTCTGACAAAAATTAAAGACAGAAACCAAAGTTTAGCCTGAGACTACAATTAATTGGGCAATAAGCCAGAGGCACATATGGCA-TAGACAGATTTAAACATTTCTCCCTGATATTAATACAAACACTAAAATTACAAATAC-ATGGATTCC--aaataaaacaaatatgt-aaaaaa-ttaatgaataaaCACTGGGGTCTACAGCAGTATTTGAAGGAGATCTCACAAACAGGTTTG-GTTTTGAAGG-TTAGAACTGGTGGTCTAGAGA-AT-TCATTTCATTCCAGAGAAAGAAAGAGAGGAATTTCTTGGGTTCCTTCAGGAATGCGTCTAGCTTTGCCTCATCTTTGTTTGAACTATGGATATGGCAGAAGAAAACATGAGGATTTCACAGATTTAAGGTGCAAAAAGTCAC-TGGGTTCTCTAAGAAGTCTGGGATTCTTCTGCTGGAAAAATAAGTTTGTTGAGAAAAAATGAGTTGGA-GGAGGCTGTTATTGAAGTGAAGCAGAATTGTTTTTACTAATCTGCTTATTACCCACTCTGTA-GTGTGGAAACAAATTATTCATGCACAAG-GTCCTCTTACTGTT-CCTAGAATGCAGTGGAAAGAGAACAGATTAGTTTTCCTCCCTCAGAACACAACCCCTAGAAACATCCTACCT--CAGATGAGATATTGCC-TAATTATTTTCAAAAAACAGTGAAAC--ATC-ATGGATGTAAA-TG-TTTGCTGCAAAATAAATACATGCTAGA-AACAGAAGCATCTGGGTCA--CAGCTATATTAGAGCT--ACCTGTGTTCCCCTGTCACTGACATTAAAACAAAAATGTC-CAATACAATCATTCAC-AGCGTGGGAGAGGGGAAGTTGAAGGATGGAAAGGCCAGGCATAAAAGGATTTCAGAATTTCCGTCCATAAGGAAGTGGCTTTGTGCACTGTCTGTTACTGCGTGCAAGGTGAAATTTGAAGAATGAAAAC-GTGCAGTAACAAGGGC-TCCTTTGTCCAACTCACCTCTCCAG-ATACCAAG-TTTCAGACATGTTGCA-TTTTAATTGAAAGGTTGATATAATTTTTTTAAAGAAC- i gorGor5.CYUI01000093v1 C 0 C 0 s nomLeu3.chr21 44636221 1091 + 86207423 AAAGCAGATGTTTT-GA-GATCAGTTACATTTCTTCTGACAAAAATTAAAGACAGAAACCAAAGTTTAGCCTGAGGCTACAATTAATTGGGCAATAAGCCAGAGGCACATATGGCA-TAGACAGATTTAAACATTTCTCCCTTATATTAATACAAATAATAAAATTACAAATAC-TTTGATTCC--AAATAAAACAAATATTT-AAAAATTTTAATGAATAAACACTGGGGTCTACAGTAGTATTTGAAGCAGATCTCATAAACAGGTTTG-TTTCTGAAGG-TTAGAACTGATGGTCTAGAGA-AT-TCAGTTCATTCCAGAGAGAGAAAGAGAGGAATTTCTTAGGTTCCTTCAGAAATGCGTCCAGCTTTGCCTCATCTTTGTTTGAACTATGGATACAGCAGAAGAAAACATGAGGATTTCACAGATTTAAGGCGCAAAAAATCAC-GGGGTTCTCTAAGAAGTCTGGGATTTTTCTGCTGGAAAAATACGTTTGCTGAGAAAAAATGAGTTGGA-GGAGGGTGTTATTGAAGTGAAGCAGAATTGTTTTTACTAATCTGCTTATTACCCGCTCTGTA-GTGTGGAAACAAATTATTCATACACAAG-GTCCTCTTACTGTT-CCTAGAATGCAGTGGAAAGAGAACAGATTAGTTTTTCTCCCTCAGAAAACAACCACTAGAAACATCCTACCT--CAGATGAGATATTGCC-TAATTATTTTAAAAAGACAGTGAAAA--ATC-ATGGATGTAAA-TG-TTTGCTGCAAAATAAACACATGCTAGA-AACAGAAGCATCTGGTTCA--CAGCTATATTAGAGCT--ACCTGTGTT-CCCTGTCAATGAGATTAAAACAGAAATGTC-CAATACAATCATTCAC-AGCGTGGGAGAGGGGAAGCTGAAGGATGGAAAGGCCAGGCATAAAAGGATTTCAGAATTTCAGTCCATAAGGACGTGGCTTTGTGCATTGTCTGTTACTGTGAGCAAGGTGAAGTTTGGAGAATGAAAAC-GTGCAGCAATAAGGGC-TCCTTTGTCCATCTCACCTCTCCAG-GTGCCAAG-TTTCACACATGTTGCA-TTTTAATTGAAATGTTGATATCATTTTTTTTAAAGAAC i nomLeu3.chr21 C 0 C 0 a score=4022.000000 s hg38.chr3_KI270784v1_alt 59157 15 + 184404 ACTTGCGGTGTTTGA s gorGor5.CYUI01000093v1 13346 15 - 2320194 ACTTGCGGTGTTTGA i gorGor5.CYUI01000093v1 C 0 C 0 s nomLeu3.chr21 44637312 15 + 86207423 ACTTGCAGTGTTTGA i nomLeu3.chr21 C 0 C 0 e panTro5.chr17 5836 13 + 83181570 I a score=128039.000000 s hg38.chr3_KI270784v1_alt 59172 301 + 184404 AGTGA-CAAAGGCT-GCTGTGACAAAAAAGCAGGGAAAGGGAATTTTTTTTT--TAAAAGCAaacaacaacaacaaaaaccccacagaaaagcaaacaacaaacaaacaaaaaacaGAGGAAGAAGTTGAACACCCCGGGCTGT-GACTACTTCCAGGAAGGGGCTAC-AAGAGGCAGTTGGAAATTCTATTTGTTTT--GCAACTGTGGGTTTTCCGGCCTGCTTCCTTTCTAAAGTATATT-ACTCTGCTTTTGGTTCATGAAGTTATCCATTTCTGTTTTCTGGAA-CAGctatgtattttctttatc------------------- s panTro5.chr17 5849 304 + 83181570 AGTGAGCAAAGGCTGGCTGTGACAAAAAGCAAGGGAAAGGGAATTTTTTTTTAATAAAGGCAaacaacaacaacaaaacccccacagaaaagc-aacaacaaacaaacaaaaaacaGA-GAAGAAG-TGAATA-CCTGGGCTGTGGGCTACTTCCAG--AAGGGCTACTAAGAGGCAGTTGGAAATTCTATTTGTTTTTGGCAACTGTGCGTTTCGCGGCCTGCTTCCTTTCTAAAGTATATTAACTCTGATTTTGGTTCGTGAAGTTATCCAATCTGTTTTTCTGGAAGCAGCTA-GTATTTTCTTTATC------------------- i panTro5.chr17 I 13 I 17 s gorGor5.CYUI01000093v1 13361 301 - 2320194 AGTGA-CAAAGGCT-GCTGTGACAAAAAAGCAGGGAAAGGGAATTTTTTTTT--TAAAAGCAAACAACAACAACAAAAACCCCACAGAAAAGCAAACAACAAACAAACAAAAAACAGAGGAAGAAGTCGAACACCCTGGGCTGT-GACTACTTCCAGGAAGGGGCTAC-AAGAGGCAGTTGGAAATTCTATTTGTTTT--GCAACTGTGGGTTTTCCGGCCTGCTTCCTTTCTAAAGTATATT-ACTCTGCTTTTGGTTCATGAAGTTATCCATTTCTGTTTTCTGGAA-CAGctatgtattttctttatc------------------- i gorGor5.CYUI01000093v1 C 0 C 0 s nomLeu3.chr21 44637327 315 + 86207423 AATGA-CAAAGGCT-GCTGTGACAAAAAAGCAGGGAAAGGGAATTTTTTTTT-aaaaaagcaaacaacaccaacaaaaaccccacagaaaagcaagc----aacaaacaaaaaacaG--GAAGAGTTCAAACACCCTGGGCTAT-GACTACTTCCAGGAAGGGGCTAC-AAGAGGCAGTTGGAAATTCTATTTGTTTT--GCAACTGTGGGTTTTCCGGCCTGCTTCCTTTCTAAAGTATATT-ACTCTGCTTTTGCTTCATGAAGTTATCCATTTCTGTTTTCTGGAA-CAGCTATGTATTTTCTTtatctatcatctatctacctacc i nomLeu3.chr21 C 0 C 0 a score=4232.000000 s hg38.chr3_KI270784v1_alt 59473 16 + 184404 tatcatctatctatcc s gorGor5.CYUI01000093v1 13662 16 - 2320194 tatcatctatctatct i gorGor5.CYUI01000093v1 C 0 C 0 s nomLeu3.chr21 44637642 16 + 86207423 tatcatctatctatct i nomLeu3.chr21 C 0 C 0 e panTro5.chr17 6153 17 + 83181570 I a score=103101.000000 s hg38.chr3_KI270784v1_alt 59489 236 + 184404 atttaccatctatcttttctacctttc-GCTATCAAGA-GCTTGTGTCAAGCAGGATAGAATTC-CAGTGTA-TGTTCACTCTA-CCGTTTAAAACAA-GAGCTCTTGT-GGGCATTCTC--CATCACATCATAAACCTGA-GCTTTCTAAAAcagagtgtggcaaactaccatgcatgg-accatgtctgac-acagtct-gcgtttgtaagtaaagttg-taatgggacacagccaatacatgtgtta s panTro5.chr17 6170 247 + 83181570 ATTTACCATCTATCTTTCTCACCTTTCGGCTATCAAGAGGCTTGGGCAAAGCAGGATAGAATTCGCAGTGTATTGTTCACTCTAGCCATTTAAAACAAGGAGCTCTTGTAGGGCATTCTCGGCATCACATCATAAATCTGAGGCTTTCT-AAAcagggtgtggcaaactaccatgcatgacgctatgtctgacaacagtctggcgtttgt-agtaaagttgaaaatgggacacagccaata-atgtgtta i panTro5.chr17 I 17 C 0 s gorGor5.CYUI01000093v1 13678 236 - 2320194 atttaccatctatcttttctacctttc-GCTATCAAGA-GCTTGGGTCAAGCAGGATAGAATTC-CAGTGTA-TGTTCACTCTA-CCATTTAAAACAA-GAGCTCTTGT-AGGCATTCTC--CATCACATCATAAACCTGA-GCTTTCTAAAAcagggtgtggcaaactaccatgcatgg-accatgtctgac-acagtct-gcgtttgtaagtaaagttg-taatgggacacagccaatacatgtgtta i gorGor5.CYUI01000093v1 C 0 C 0 s nomLeu3.chr21 44637658 236 + 86207423 atttactatctatctTTTCTACCTTTC-GCTATCAAGA-GCGTGAGTCAAGCAGGACAGAATTC-CAATGTA-TATTCACTCTA-CCATTTAAAACAA-GAGCTCTCGT-AGGCATTCTC--CATCACATCATAAACCTGA-GCTTTCTAAAAcagggtgtggcaagctaccatgcatgg-accatgtctgac-acagtct-gcgtttgtaagtaaagttg-taatgggacacagccaATACATGTGTTa i nomLeu3.chr21 C 0 I 11042 a score=181615.000000 s hg38.chr3_KI270784v1_alt 59725 426 + 184404 ca-taatgtct-ctggctacttt--catggtataatggaagagctgagtca-ttgagagagagaccatatggcttggaa-aacttaaaatatttaacat-ttagccccttgcagaaaatacttgctgactcttgTTTTAAAAGAT-CTCTGTT-TAGAAT-GCTA-CCTATTGCGTTCTGGATAGAATCACAACTC-TTTACCACAATTGACACAGCTTCAgccctgcttctatatccagcctc-atctatttctgctcctcctccttattttccttctggccatgctgatggattgtcagcttcccagatgtgcaagaatctctcctcccttcc-caacatt-ctcatg-ctctccctctgcct-ctcaa-gaacttc-ctgcc--ccatctctcatgacaaatcctttctacattctttaagatgcagcccctttgctccttcct s panTro5.chr17 6417 432 + 83181570 cattaatgtctcctggctacttttccat-gtataatggaagagctgagtcatttgagagagagaccatatggcttggaacaacttaaaa-attt-acatattagcccc-tgcagaaaata-ttgctgactcttgTTTTAAAAGATACTCTGTTGTAGAATGGCTAGCCTATTGCGTTCTGGA-AGAATCAGAACTCTTTTACCACAATCGACACAGCTTCAG-CCTGCTTCTATAT-CAGCCTCAATCTATTTCTGCTCCTCCTCCTTATTT--CCTCTGGCCATGCTGATGGATTGTCAGCTTCCCAGATGTGCGAGAATCTCTCCTCCCTTCCACAACATTACTCATGCCTCTCCCTCTGCCTGCTCAAGGAACTTCTCTGCCCGCCATCTCTCATGACAAATCCTTT-TACATTCTATAAGATGCA--CCCTTTG--CCTTCCT i panTro5.chr17 C 0 I 30 s gorGor5.CYUI01000093v1 13914 425 - 2320194 ca-taatgtct-ctggctacttt--catggtataatggaagagctgagtca-ttgagagagagaccatatggcttggaa-aacttaaaatatttaacat-ttagccccttgcagaaaatacttgctgactcttgTTTTAAAAGAT-CTCTGTT-TAGAAT-GCTA-CCTATTGCGTTCTGGATAGAATCACAACTC-TTTACCACAATCGACACAGCTTCAgccctgcttctatatccagcctc-atctatttctgctcctcct-cttattttccttctggccatgctgatggattgtcagcttcccagatgtgcgagaatctctcctcccttcc-caacatt-ctcatg-ctctccctctgcct-ctcaa-gaacttc-ctgcc--ccatctctcatgacaaatcctttctacattctttaagatgcagcccctttgctccttcct i gorGor5.CYUI01000093v1 C 0 C 0 s nomLeu3.chr20 23129 426 + 85365473 TA-TAATGTCT-CTGGCTACTTT--CATGGTAAAATGGAATAGCTGAGTCA-TTGAGAGAGGGACCATAtggcttggaa-aacttaaaatatttaacat-ttagccctttgcagaaaatatttgctgactcttgTTTTAGAAGAT-CTTTGTT-TAGAAT-GCTA-CCTATTGCCTTCTGGGTAGAATCACAACGC-TTTACCACAGTCAACACAGCTTCAGCCCTGCTTCTATATCCAGCCTC-ATCTATTATTTCTGCTGCTTCTCATTTTCCTTCTGGCCATGCTGATGGATTGTCAGCTTCCCAGATGTGCGAGAATCTCTCCTCCCTTCC-CGACATT-CTCATG-CTTTCCCTCTGCCT-CTCAA-GAACTTC-CTGTC--CCATCTCTCATGACAAATCTCTTCTTCATTCTTTAAGATGCAGCCCCTTTGCTCCTTCCT i nomLeu3.chr20 n 11042 C 0 a score=8120.000000 s hg38.chr3_KI270784v1_alt 60151 32 + 184404 taaggatgtctgtctggctctattttgggtga s gorGor5.CYUI01000093v1 14339 32 - 2320194 taaggatgtctgtctggctctattttgggtga i gorGor5.CYUI01000093v1 C 0 C 0 s nomLeu3.chr20 23555 32 + 85365473 TAAGGGCGTCTGTCTGGCTTCATTTTGGGTGA i nomLeu3.chr20 C 0 C 0 e panTro5.chr17 6849 30 + 83181570 I a score=363735.000000 s hg38.chr3_KI270784v1_alt 60183 850 + 184404 cgtgc-tccttctg-catctcccagagccagcctgtgtgtgtcagctacaacatttctttgcatctctgtgtcATATATCACCAAATCT-GCCTAAGCTTGCATGAGTCACTGCATGAC-AACTTCAGACTCCACCAGCATTG-TCCCCACTAACCACAAGGCTTAGACATTCGTCCAGTATGCTCGGGGTTGTGGGGTGGTAGCAGTAACCAGCTGGTGACCAT-CATTTCTTACATCAGAATCAAATCTGTAG-ATCTCTGC-CATTCGT-AAGTATTTGGAGTTTAAAATTAGC-ATAAAGATTTTCCTTAAAATAAGAACAAATGGCTTGAGTAGGCTTTTGGAACATA----GGATGTTTCCACTG-GTTCATTTCTGTGTTCAATATTCCCACATGAATCTAA-ACAC-gactctgctctta-gtagctatgtgaccctgg-gaaagtcactcaatctcccgcagctaaattttgttgtgtg-ag-taatgag----gagttgtgatttgtatttagagaataa-taacaaacaaa-aggcatttagctttctggaacctggt-atgtagtagaacctcatgaaa--tactagctctgt-tGATAAAACTAGACTGAAAGAAGC-TTTCAAAGTCAACA-ACAGTTTGAGGCAGTGAAGG-ACGTAGAGGAGAA------GCTGCTGCTGCAGCCTGTAGCTCCTGGAAGCC-CGTTTAGTCCATGATTTAGCAG-GAATGCATTACCCTTCCA-TGAGG-AGGCACTGCCCACAGAAACCAACGCC--ATTCTTTGAAGACAAACATGTCTTAATAGCCTTTACATTATGTAATAGTGTAATACAAATAATAATT-TA-TTATTAGTAATAATGTGAAATTATTTACAGTa s panTro5.chr17 6879 875 + 83181570 CGTGCTTCCTTCTGCCATCT-CCAGAG-CAGCCTGTGTGTGTCAGCTACAACATTTCTTTGCATCTCTGTGTCATATATCACCAAATCTGGGCTAAGCTTGCATGAGTCACTGCATGACAAACTTCAGACTCCACCAGCATTGCTCCCCACTAACCAAAAGGCTTAGACATTCGTCCAGTATGCTCGGGGTTGTGGGGT-GTAGCAGTAACCAGCTGGTGACCATGCATTTC-TACATCAGAATCAAATCTGTAGAATCTCTGCGCATTCATAAAGTATTTGGAGTTTAAAATTAGCAATAAAGA-TTTCCTT-AAATAAGAACAAATGGCTTGAGTAGGCTTTGCGAACATAGGGGGGATGTTTCCACTGCGTTCATTTCTGTGTTCAATATTCCCACATGAATCTAATACACGgactctgctcttacgtagctatgtgaccctggcgaaagtcactcaatctccctcagctaaattttgttgtgtgtagttaatgaggaGAGAGTTGTGATTTGTATTTAGTGAATAATTAACAAACAAATAGGCA-TTAGCTTTCTGGAACCTGGTAATGTAGTAGAACCTCATGAACATTACTAGCTCTGTCTGAT-AAACTAGACTGAAAGAAGCTTTTCAAAGTCAACATACAGTTTGAGGCAGTGAAGGCACGT-GAGGAGAA------AGCGCTGCTGCG--CTGTAGCT-CTGGAAGCCGCGTTT-GTCCAT-ATTTAGCAGCGAATGCATTACCCTTCCATTGAGGAAGGCACTG-CCACAGAAACCAG-GCCGGATTCTTTGAAGACAAACATGTCTTAATAGCCTTTACATTATGTAAT-GTGTAATACAAATAATAATTCTATTTATTAGTAATAATGTGAAATTATTTACAGCC i panTro5.chr17 I 30 C 0 s gorGor5.CYUI01000093v1 14371 848 - 2320194 cgtgc-tccttctg-catctcccagac-cagcctgtgtgtgtcagctacaacatttctttgcatctctgtgtcATATATCACCAAATCT-GCCTAAGCTTGCATGAGTCACTGCATGAC-AACTTCAGACTCCACCAGCATTG-TCCCCACTAACCACAAGGCTTAGACATTCGTCCAGTATGCTCGGGGTTGTGGGGTGGTAGCAGTAACCAGCTGGTGACCAT-CATTTCTTACATCAGAATCAAATCTGTAG-ATCTCTGC-CATTCAT-AAGTATTTGGAGTTTAAAATTAGC-ATAAAGATTTTCCTTAAAATAAGAACAAATGGCTTGAGTAGGCTTTTGGAACATA----GGATGTTTCCACTG-GTTCATTTCTGTGTTCAATATTCCCACATGAATCTAA-ACAC-gactctgctctta-gtagctatgtgaccctgg-gaaagtcactcaatctccctcagctaaattttgttgtgtg-ag-taatgaggagagagttgtgatttgtatttagtgaataa-taacaaacaaa-aggcatttagctttctggaacctggt-atgtagtagaacctcatgaaa--tactagctctgt-tGATAAAACTAGACTGAAAGAAGC-TTTCAAAGTCAACA-ACAGTTTGAGGCAGTGAAGG-ACGTAGAGGAGAA------GCTGCTGCTGCAGCCTGTAGCTCCTGGAAGCC-CGTTTTGTCCATGATTTAGCAG-GAATGCATTACCCTTCCA-TGAGG-AGGCACTGCCCACAGAAACCAAGGCC--ATTC-TTGAAGACAAACATGTCTTAATAGCCTTTACatta--taatagtgtaatacaaataata--t-ta-ttattagtaataatGTGAAATTATTTACAGTa i gorGor5.CYUI01000093v1 C 0 C 0 s nomLeu3.chr20 23587 849 + 85365473 CGTGC-TCCTTCTG-CATCTCCCAGAG----CCAGCATGTGTCAGCTACGGCATTTCTTTGC----CTGTGTCGTATATCACCAAATCT-GCCTAAGCTTGTGTGAGTCACTGCATGAC-AACTTCAGACTCCACCAGCATTG-TCCGCACTAACCACGAGGCTTAGACATTTGTCCAGTAAGCTCAGGGTTGTGGGGTGGTAGCAGTAACCAGCTGGTGAGCAT-TATCTCTTACATCAGAATCAAATCTGTAG-ATCTCAGC-CATTCAT-AAGTATTTGGAGTTTAAAATTAGC-ATAAAGATTTTCCTTAAAATAAGAATAAATGGCTTGAGTAGGCTTTTGGAACATA----GGATATTTCTGCTG-GTTCATTTCGGTGTTCAGTATTCCCACATGAAtctaa-acat-gactctgctctta-gtagctgtgtgaccctgg-gaaagtcactcaatctctctcagctaaattttgttgtgtg-ag-taatgagaagagagttgtgatttgtatttagtgagtaa-taacaaacaaa-aggcatttggctttctggaacctggt-atgtagtagatcctcatgaaa--taccagctctgt-tGATAAAACTAGACCGAAAGGAGC-TTTCAAAGTCAACA-ACAGCATCATGCAGTGAAGG-ACGTGGATGAGAAgctgctgctgctgctgcagcctgcagctcctgGAGGCC-CGTTTTGTCCATGATATAGCAG-GAACGCACTACCTTTCCA-TGAGG-AGACACTGCCCACAGAAACAAAGGCT--ATTCTTTGAAGACAAACATGTTTTAATCATCTTTACATTACGtaatagtgtaataaaaataataatt-ta----ttaataataatataaaattatttatatta i nomLeu3.chr20 C 0 I 3958 a score=5271.000000 s hg38.chr3_KI270784v1_alt 61033 35 + 184404 ccctaaccctaaacctaa-ccctaatcctaacccta s panTro5.chr17 7754 35 + 83181570 Tcctaaccct-aacctaacccctaatcctaacccta i panTro5.chr17 C 0 I 346 s gorGor5.CYUI01000093v1 15219 34 - 2320194 cccaaaccctaaccctaa-ccctaaccctaaccca- i gorGor5.CYUI01000093v1 C 0 C 0 e nomLeu3.chr20 24436 3958 + 85365473 I a score=30433.000000 s hg38.chr3_KI270784v1_alt 61068 594 + 184404 accctaaccctaac----accctaaccctaa---aaccctaaccctaaccctaaccctaat----cctaaccctaatccttacccttacccttaccctgaccctaaccctaatc---cttacccttatcctacccctaacccttaacccctaacccctaaccctaacccttaacccaaaccataaccctaaaacgctaaccctaaccctcaccctcacc-cctcacccctcacccaaaccataatccctaacccctaactcttaacccctaaccctaacccttgaccctaacccttgacccaaac----ccctgaccctgacccttaacccttaaccctaaccctaacccttaaccctaaccctaaccctaacccctaaacctaacccttaaccttcatcctcaccctcacccacacccctaaccctaaccctaaccctaaccctaaccctaacccctgaccctgacccttaacccttaaccctaaccctaacccttaaccctaaccctaaccctaacccctaaacctaacccttaaccttcatcctcaccctcacccacacccctaaccctaaccctaaccctaaccctaaccctaaccctaaccctaaccc s gorGor5.CYUI01000093v1 15253 583 - 2320194 acccaaaccacaaccctaaccctaaccctaacccaaccctaaccctaaccc-aaccctaacccaaccaaaccctaaccctaaccc-aaccctaaccctaaccctaaccctaccctaacctaccctaaccctaaccctaaccc-taacccctaaccc--aaccctaacc--taaccctaaccctaaccctaaa--cctaaccctaaccctaaccctaaccaccctaaccct-accctaacccta--ccctaa-ccctaac-cctaacccctaaccc-aaccc-taaccctaacc--taaccctaaccctaccctaaccctaaccc-taaccct--accctaaccctaaccc-taaccctaaccctaaccctaacccttaaccctaaccc-taaccctaaccctaaccctaaccc-taaccctaaccctaaccctaaccccaaccctaaccctaa-ccctaaccctaacccctaaccctaacccctaacccttaacc-taaccctaaccctaaccctaacccct-aacccaacccctaacc-caaccctaaccctaaccctaacccc-aaccctaaccctaaccc-aaccctaaccctaaccctaaccctaaccc i gorGor5.CYUI01000093v1 C 0 N 0 e nomLeu3.chr20 24436 3958 + 85365473 I e panTro5.chr17 7789 346 + 83181570 I a score=0.000000 s hg38.chr3_KI270784v1_alt 61662 836 + 184404 taaccctaaccttcatcctcaccctcacccacatccctaaccctaaccctaaccctaaccctaacccctaaccctaaccctcaccctcacccctcacccctcacccaaaccataatccctaagccttaactcttaacccctaaccctaacacttgaccctaacccttgacccaaacccctgaccctgaccctgacccttaacccttaaccctaacccctaaccctaaccctaaccctaacccttaaccctaaccctaaccctaacccctaacccttaaccttcatcctcaccctcacccacacccctaaccctaacccctaacccctaacccaaacccgaaccctaaaccctaacactaaacccaaccagaaacctaacctgaaccctaacccgaaccataaacctgaaccctaaacccgaaccctaaccctaaccctaaccctaaccctaaccctaacccgaaccctaaccctaacccaaccctaaccctaaccctaaccctaaaccctaacactaaacccaaccagaaccctaacctgaaccctaacccgaaccataaacctgaaccctaaacccgaaccctaaccctaaccctaaccctaatccttaccctaaccctaaccctaaccctaaccctacccttatcctacccctaacccttaacccctaacccctaaccctaacccttaaccctaaccataaccctaaaacgctaaccctaaccctcaccctcacccctcacccctcacccaaaccataatccctaacccctaactcttaacccctaaccctaacccttgacccaaacccctgaccctgacccttaacccttaat e nomLeu3.chr20 24436 3958 + 85365473 I e panTro5.chr17 7789 346 + 83181570 I a score=20819.000000 s hg38.chr3_KI270784v1_alt 62498 357 + 184404 ccttaaccctaacccctaaccctaac-cctaaccctaacccctaaccctaacccttaaccttcatcctcaccctcacccacacccctaaccctaacccctaacccaaacccgaaccctaaaccctaacactaaacccaacca-gaaccctaacctgaaccctaacccgaaccataaacctgaaccctaaacccgaacc-----ctaaccataacccaaacccgaacccgaaccctaacccctaacccctaaccctaaccctaccctaacccaaccctaacccaaccctaactctagccctagccctagcc-cta-gccctaagccctaagcctaaccccaaccccaaccccaaccctaacccta---ac s panTro5.chr17 8135 356 + 83181570 ccttgaccctaaccgctaacactaacgccttaccctaagccctaacactaacctgcaaccctcatcctcaccctcacct-caccc-taaccctaacct-taacccaaaccctaaccctaa--cctaac-ccaaacccaaccgcgaaaccctacctgaacc-taacc-gaaccataaacctgaaccctaaacccgaaccgaaccctaaccataaccagaacccaaacccgaaccctaacccctaaccc-taacc-taacc-taccctaacccaaccctaacccaaccctaactctagccctagccctagccgctaagccctaagcc-taagcctaaccc-aaccccaaccccaacccaaccccaacctac i panTro5.chr17 I 346 C 0 e nomLeu3.chr20 24436 3958 + 85365473 I a score=26316.000000 s hg38.chr3_KI270784v1_alt 62855 161 + 184404 ccttcctcagcctcTCAACCTGCTTGGGTTACAGGTATGAGCCCGGGTGCCTGGCc-aaacattccattttatatgtatatgctaggaatgaataatctctaaaccaaat-tatgaaaa-ttctacct--taaataata-ccaatag--caatattatacttag-gaata s panTro5.chr17 8491 168 + 83181570 ccttcctcagcctcTCAACCTGCTTGGGTTACAGGTATGAGCCCGGGTG-CTGGCC-AAACATTCCATTTTATATGTATATGCTAGGAATGAATAATATCTAAACCAAATGTATGAAGATTTCTACCTCATAAACAATATCCAATAGAATATTATTATACTTAGCGAATA i panTro5.chr17 C 0 I 96 s calJac3.chr8 91742295 162 - 128169293 cctgcctcagcctcccaaaatgctgggattactggcataagccaccatgcttggccAAaaaaatccattttatatgtatacaccagcaatgaataatctgaaaacaaaat-tacaaaaa-ttccactg--caaataata-ccaatag--caataatatacttag-gaata i calJac3.chr8 N 0 C 0 e nomLeu3.chr20 24436 3958 + 85365473 I a score=4884.000000 s hg38.chr3_KI270784v1_alt 63016 78 + 184404 aatggaatgaaacgacaagacttagatgagggaaattataagacattacttaaggaaattaaacttccaataaatgta s calJac3.chr8 91742457 78 - 128169293 aatgtaatcaaagggtaagacttagaaggggaaaattataagatattgcttaaggaaattaaagaccaaataaatgta i calJac3.chr8 C 0 C 0 e nomLeu3.chr20 24436 3958 + 85365473 I e panTro5.chr17 8659 96 + 83181570 I a score=26451.000000 s hg38.chr3_KI270784v1_alt 63094 136 + 184404 aaaatgta-----tcttatttgtggatttgtagaccaca-ttgttaagtttcccaaagtacacaaagcaatccgtggattcgatgttattcctacaaaaatcccaaaggccttgggacagaagtggataagctgatcctgat s panTro5.chr17 8755 141 + 83181570 AAAATGTATATCTTCTATtttgtggatttgtagaccaca-ttgttaagtttcccaaagtacacgaagcaatccgtggattcaatgttattcctacaaaaatcccaaaggccttgggacagaagtggataagctgatcctgat i panTro5.chr17 I 96 C 0 s calJac3.chr8 91742535 136 - 128169293 aaaacatg-----tc-atatcatggatctgaaaaccatattttttaagtttgccaaactacacaaagcaatctacagattcagtgttattcctatgaaaatcccaaaggtcttgggacagaaatgagaaagctgatcctaat i calJac3.chr8 C 0 I 73 e nomLeu3.chr20 24436 3958 + 85365473 I a score=1746.000000 s hg38.chr3_KI270784v1_alt 63230 3 + 184404 cac s panTro5.chr17 8896 3 + 83181570 cac i panTro5.chr17 C 0 C 0 s calJac3.chr8 91742744 3 - 128169293 cac i calJac3.chr8 I 73 C 0 s cebCap1.NW_016107703v1 360615 3 - 2125214 cac i cebCap1.NW_016107703v1 N 0 C 0 e nomLeu3.chr20 24436 3958 + 85365473 I a score=511305.000000 s hg38.chr3_KI270784v1_alt 63233 712 + 184404 atcccaatttcaaattttattacaaaggaacagtaataaaaacagtgggatccttgcacaggaataaacagaaagatcaactgaattgaattgggagtccagacagaaaacaatacctctatgctcaactgattttagacaaggtccattaccagtaaattggggaaagaatcctgtcctcaacaagtgatgtaaggcaacttgctatccacataaagggaaatgaaattgtatccttacctcataccacat-aaaaaattaacttacaatggatcaaagaccaaaacaggtgaaaactaaaaactctggaagaaaacgtacagttaagcattcatgaccttacacatagcaatagtttcctacatctgacaccaaaagcacagaccacaaaaggaaaaataaatcaatttatttcctcaaaattcacaacttttatgtctcagaagacatgaagaaaaaagttgaaagacaaAA-TGTTATAAtaggaaaaacaactgtcttatagtatactctcaacactcaacacagaacacttctgttaccagatacatggg-ttttttccccacacagaccaaatcttgggtaccagctgggtgtcctacagtgcaatccaattgtgacagtaaatggagaaagcatcagaccccacaggctaagggctcagtcctaGGAATACACGTCATGCCCcttgttgcttgcaaat-ttaaatgac s panTro5.chr17 8899 712 + 83181570 atcccaatttcaaattttattacaaaggaacagtaataaaaacagtgggatcctcgcacaggaataaacagaaagatcaactgaattgaattgggagtccagacagaaaacaatacctctatgctcaactgattttagacaaggtccattaccagtaaattggggaaagaatcctgtcctcaacaagtgatgtaaggcaacttgctatccacataaagggaaatgaaattgtatccttacctcataccacat-aaaaaattaacctacaatggctcaaagaccaaaacaggtgaaaactaaaaactctggaagaaaacatacagttaagcattcatgaccttacatgtagcaatagtttcctacatctgacaccaaaagcacagaccacaaaaggaaaaataaatcaatttaattcctcaaaatttacaacttttacgtctcagaagacatgaagaaaaaagttgaaagacaaAA-TGTTATAAtaggaaaaacaactgtcttatagtatactctcaacactcaacacaaaacacttctgttaccagatacatggg-ttttttccccacacagaccaaatcttgggtaccagctgggtgtcctacagtgcaacccaattgtgacagtaaatggagaaagcatcagaccccacaggctaaggactcagtcctaGGAATACACGTCATGCCCcttgttgcttgcaaat-ttaaatgac i panTro5.chr17 C 0 C 0 s calJac3.chr8 91742747 700 - 128169293 atcccaacttcaaatcttactacaaagcaatagtaatcaaaacagcatgatactggcacaagaataaacagaaagatcaattg-----aattgggagtccagacataaaacaatacctccatgctcaactgattttagacaagatccatatccattaaattggggaaaaaatgctgtcctcaacaagtgatgtaaggcaacttgctgtccacacagagggaaatgaaattgcatccttacctattaccacataaaaaaattaacttaaaatggatcgaagacctaaatattacaaaacctaaaactctataagaaaacaaacagttaaaccttcatgaccttggatgtagcagtagtttcttagatctgacaccgaaaccacaaaccacaaaaggaaaaataaatcaattgatttcctcgaaattcaaaacttttacgcctcagaagacatgaaaa-aaaaattgaaagacaaAATTGTTATAAtaggaaaaacaactgtcttctattatgctctcaacactcaacaccaaacacttctgttaacagaggcatggg-ttttttccccacacagaccaaatcttgggtaccaactaagtgt---------caatccaattctgacactaactggagaaagcatcagaccccacaggctaagagctcactcctaGGAATGCAGGTCATGCCTCTTGTTGCTTGTGTTTGTCAACTGAC i calJac3.chr8 C 0 I 5 s cebCap1.NW_016107703v1 360618 713 - 2125214 atcccaatttcaaaccttattacaaagcaatagtaatcaaaatgccatgaaactggcacaaaaataaacagaaagatcaattgaattaaattgggaatccagacataaaacaatacctctatgctcaaatgattttacacaaggtccataatcattaaattggggaaataatgctgtcctcaacaagtgatgtaaggcaactttctatccacttaaagagacacgaaattatatccttaacttatgccacatgaaaaaattaacttaaaatggatcaaagacctaaatatggaaaaaccaaaaaatctagaagaaaacgtacagttaaaccttcatgaccttggatgtagcaatagtttcttagatctcacatcaaaactacaaaccacaaaaggaaaagtaaatcaattgatttcctcaaaattcaaaacttttatgcctcagaagacatgaaga-aaaagttgaaagacaaAATTGTTATAAtaggaaaaacaactgtcttctagtatactctcaacgctcaacacagaacacttctgttaacagatgcatggg-ttttcttcccaaacagaccaaatcttgggtaccagctgggtgtcctacagtgcaatccaattctgacactaactggagaaagtatcagaccccacaggctaagggttcagtcctaggaactcaggtcatgcctcttgttgcttgcaaat-tcagttgac i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487412v1 55461 704 + 1028614 atcccaatttcaaaccttattacaaagcaatagtaatcaaaa--gtgtgacaccggcacaagaatcaacagaaagaccaattgagttgaattgggagtccagacataaaacaatgcctccaggctcaactgattttagacaagatccatgaccattaaattgcagcaaaaatgctgtcctcaacaagtgatgtaaggcaacttgctatccacataaagggaaatgaaattgtgtacttgcctattaccacataaaaaaattaacttgaaatggatcaaagacctaaatatggcaacactaagaactctagaagaaaacatacagttaaaccttcatgaccttggatgaggcgatagtttcttagatttgacacca-------aaaccacaaaaggaaaaataaatcaatagatttcctcaaaattcaaaacttttataccacagaagacatgaagacaaaagctgaaagacaaAATTGCTTTAACaggaaaaacaactgtcttctagtacactctgaacattcaacacagaacactcctgttaacagatgcatgggtttttttccccacacagaccaaatcttgggtaccagttaagtgtcctacagtacaat-cagttctgacactatctagagaaagcatcaga-cacacaggctaagggctcagtcctaggaatgcaggtcatccctcttgttgtttgcaaat-tcaactgac i aotNan1.NW_018487412v1 N 0 C 0 e nomLeu3.chr20 24436 3958 + 85365473 I a score=7002.000000 s hg38.chr3_KI270784v1_alt 63945 13 + 184404 aaacacaaggatg s panTro5.chr17 9611 13 + 83181570 aaacacaaggatg i panTro5.chr17 C 0 C 0 s cebCap1.NW_016107703v1 361331 13 - 2125214 aaacacaaggatg i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487412v1 56165 13 + 1028614 gaacacaaggatg i aotNan1.NW_018487412v1 C 0 C 0 e calJac3.chr8 91743447 5 - 128169293 I e nomLeu3.chr20 24436 3958 + 85365473 I a score=72146.000000 s hg38.chr3_KI270784v1_alt 63958 93 + 184404 gtaaaaagaaagtgactttatgccagagcttagctgaagggaacatacaggctcttgccttaagggaagcgcttccactttctgggcagaaag s panTro5.chr17 9624 93 + 83181570 gtaaaaagaaagtgactttatgccagagcttagctgaagggaatgtacaggctcttgccttacgggaagcgcttccactttctgggcagaaag i panTro5.chr17 C 0 C 0 s calJac3.chr8 91743452 93 - 128169293 gtaaaaagaaagtgactttatgccagaactcagcagaaggaaacatagaggctcttgccttaaggaaacagcttccactttcggggcagaaag i calJac3.chr8 I 5 C 0 s cebCap1.NW_016107703v1 361344 93 - 2125214 gtaaaaagaaagtgactttatgccatagcctagctgaagggaacatacaggctcttgccttaagggaactgcttccactttcagggcagaaag i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487412v1 56178 93 + 1028614 gtaaaaagaaagtgactttatgccagagcttagctagagggaacatacaggctcttcccttaaagaaatcctttccactttgggggcagaaag i aotNan1.NW_018487412v1 C 0 I 11 e nomLeu3.chr20 24436 3958 + 85365473 I a score=-280.000000 s hg38.chr3_KI270784v1_alt 64051 9 + 184404 -cggggc-ttc s panTro5.chr17 9717 10 + 83181570 -cggggctttc i panTro5.chr17 C 0 C 0 s calJac3.chr8 91743545 10 - 128169293 tgggagattt- i calJac3.chr8 C 0 I 7 s cebCap1.NW_016107703v1 361437 10 - 2125214 caggagcttt- i cebCap1.NW_016107703v1 C 0 I 7 e aotNan1.NW_018487412v1 56271 11 + 1028614 I e nomLeu3.chr20 24436 3958 + 85365473 I a score=97222.000000 s hg38.chr3_KI270784v1_alt 64060 143 + 184404 ggacttgccagaatggcatgca-ggggatgaggtgaggaggtgcggggtctatgggacatgctctgatgttttctccattaggtggtcttgctagcaccaccacgggcagagccaggttgtaaattgactgttgtctgctgcca s panTro5.chr17 9727 143 + 83181570 ggacttgccagaatggcatgca-ggggatgaggtgaggaggtgcggggtctatgggacatgctctgatgttttctccattaggtggtcttgctagcaccaccatgggcagagccaggttgtaaattgactgttgtctgctgcca i panTro5.chr17 C 0 C 0 s calJac3.chr8 91743562 140 - 128169293 ggacttcacaggatggtatgca-ggggatggggtgaggaggtgcagggtctatgggacttgctctgacgttttatccattaagtggtcttgccaacaccaccacaggcagagctgggttgt-aactgactgttg--tcttggca i calJac3.chr8 I 7 C 0 s cebCap1.NW_016107703v1 361454 133 - 2125214 ggagttggcagaatggcatgca-ggggatggggcgaggaggtgcagggtctatgggacttgctctgatgttttatccattaggtggtcttgctagcaccaccacaggcagagctacattgtaaattgactattg---------- i cebCap1.NW_016107703v1 I 7 C 0 s aotNan1.NW_018487412v1 56282 140 + 1028614 ggactttgcagaatggcatgcagggggatagggtgaggaggtgcagggtctatgggacttgctctgatgtttaatccattaggtagt----caagcaccaccccaggcagaggcaggttgtaaactgactgttgtctcttgtta i aotNan1.NW_018487412v1 I 11 I 32 e nomLeu3.chr20 24436 3958 + 85365473 I a score=12371.000000 s hg38.chr3_KI270784v1_alt 64203 32 + 184404 atctcctggtgggggagagatagggaagtgcc s panTro5.chr17 9870 32 + 83181570 atctcctggtgggggagagatatggaagtgcc i panTro5.chr17 C 0 C 0 s calJac3.chr8 91743702 31 - 128169293 atctcctggtgggggagag-tttggagatgcc i calJac3.chr8 C 0 I 1 s cebCap1.NW_016107703v1 361587 31 - 2125214 -tctcctggtggaggagagctcctgaggtgcc i cebCap1.NW_016107703v1 C 0 I 1 e aotNan1.NW_018487412v1 56422 32 + 1028614 I e nomLeu3.chr20 24436 3958 + 85365473 I a score=219523.000000 s hg38.chr3_KI270784v1_alt 64235 313 + 184404 agtttgtttcaaggtttggtccctggaacttacaagtaatcacacagttggaaaagtttgcagtataggaagtgtctggtggagagacagtaaagcttataattgcattcctaaagagct-------aaatgcaggaacagcaaaatggtaaaactaattcatttcttctttaagaaaatatgggtactcagttacaagactgtaaccacttaagatgccaaccacaaacagtaggttcccaggttaccttctgtctgactttgctacagattggaggctcccacaatacccttattgggttcagcaatttgctacataa s panTro5.chr17 9902 313 + 83181570 agtttgtttcaaggtttggtccctggaacttttaagttatcacacagttggaaaagtttgcagtataggaagtgtctggtggagagacagtaaagcttataattgcattcctaaagagct-------aagtgcaggaacagcaaaatggtaaaactaattcatttcttctttaagaaaatatgggtagtcagttacaagactgtaaccatttaagatgccaaccacaaacagtaggttcccaggttaccttctgtctgactttgctacagattggaggctcccacaacacccttattgggttcagcaatttgatacatca i panTro5.chr17 C 0 C 0 s calJac3.chr8 91743734 320 - 128169293 agtttatttaaaggtttggtccctggaacttctaagtaaacacacagtaagaaaagtttccagtgtaggaagtgtctggtggagagacagtaaagcttataattgcattcctaaacagctaagtaggaagtgcagaaaaaggaaaacagtaaacgtaattcattttttctttaagaaaatatgggtactcagttataagactgtaactacttaagatgccaatcacaaatagtaggttcccaggttaccttctgcctaacttggctatagattggaggctcccacaacacccttattgggttcagcaatttactacagca i calJac3.chr8 I 1 C 0 s cebCap1.NW_016107703v1 361619 310 - 2125214 agtttgtttcaaggtttggtttctggaacttctgagtaaacacat----agaaaagtttgcagtgta-gaagtgtctggcagagagacagtaaagcttataattgaattcctaaagagctatgtaggaagtgcaggaaaagaaaagtggtaaaagtagttcatttcttccttacgaaaatacgggtactcagttacaagac--taactattaaagatgcccatcacaaa---taggttcccaggttaccctctgtctgacttggctacagattggaggttcccacaatacccttattgggttcagctatttactacagca i cebCap1.NW_016107703v1 I 1 C 0 s aotNan1.NW_018487412v1 56454 311 + 1028614 actttgattcaaggttttgtccctggaacttctaagtaaacacacagttagaaaagtttccagcgtaggaagtgtctagtggagag--agaaacacttataattgcattcctaaagagcaaagtaggaagtgaaggaaaaggaaaacagtgaaagtaattcattttttctttaagaaaatacgggtactcagttacaagac------tacttaagata-caattacaaacagtaggtttccaggttaccgtctgtctgacttggctacagactggaggctctgaaaacactcttactgggttcagcaatttactacaaca i aotNan1.NW_018487412v1 I 32 C 0 e nomLeu3.chr20 24436 3958 + 85365473 I a score=35342.000000 s hg38.chr3_KI270784v1_alt 64548 46 + 184404 ca---ttacaca---acccatgaaagcagtgtacttactattcctgactcat s panTro5.chr17 10215 46 + 83181570 ca---ttacaca---acccatgaaagcagtgtacttactattcctgactcat i panTro5.chr17 C 0 C 0 s nomLeu3.chr20 28394 49 + 85365473 ca---gtacacagttatccatgaaaacagtgtacttactattgctgacttat i nomLeu3.chr20 I 3958 C 0 s calJac3.chr8 91744054 46 - 128169293 ca---ttacaga---actcacaaaagcagtatacttaccattgctgacttat i calJac3.chr8 C 0 C 0 s cebCap1.NW_016107703v1 361929 36 - 2125214 ca---ttacaga---acctatgaaaacagtgcacttactagt---------- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487412v1 56765 47 + 1028614 cattgttgtaga---acccatgaaa--agtgtacttactattgctgacttat i aotNan1.NW_018487412v1 C 0 C 0 a score=1015951.000000 s hg38.chr3_KI270784v1_alt 64594 693 + 184404 taccaaggatcttttaaatgctacaaatgaaaagccagatgaagagatgcacaaggtgaggtatatggaaggaatgcaggcctcccatgccctcgccagat-atgatcctccc-agtatct-cctgtgttgggagagcaacacagatgctctcccaaccctgtcctttattacacaggcagattggttacgtctgtggccataggtgatcaactcaaccatcagcacctctccccttcacagagacgggacgggggaagaaatttcaaatcctctcatgacaaggttgcttcccttggcagccagacccactgaggctgtccaggtgcccccagccatcaatcatttcattagcatacgaaagacacattacttcgtacattcccaaggcttagcgctctgtttcaggacactgcagcagagaccacacattaACTCTTATTACGTTCCAacaacctataaaatggaag-aaaatgtctgcacattagatacttcatcagtgtctgttatccagaatgtataaagaacttttacaactccatagcaaagacaacccaatctaaaaattgacaaaagactttaatacacacttcaccaacaagcacatgaaaagatgcttagcatcatta-ccataattaaaaccataaagagataacccttaactcacacaagaatagttatactaaaaactaacaa-g s panTro5.chr17 10261 693 + 83181570 taccaaggatcttttaaatgctacaaatgaaaagccagatgaagagatgcacaaggtgaggtatatggaaggaatgcaggcctcccatgccctcgccagat-atgatcctccc-agtatct-cctgtgttgggagagcaacacagatgctctcccaaccctgtcctttattacacaggcagattggttacgtctgtggccataggtgatcaactcaaccatcagcacctctccccttcacagagacgggacgggggaagaaatttcaaatcctctaatgacaaggttgcttcccttggcagccagccccactgaggctgtccaggtgcccccagccatcaatcatttcattagcatacgaaagacacattacttcgtacattcccgaggcttagcgctctgtttcaggacactgcagcagagaccacacattaACTCTTATTACGTTCCAacaacctataaaatggaag-aaaatgtctgcacattagacacttcatcagtgtctgttatccagaatgtataaagaacttttacaactccacagcaaagacaacccaatctaaaaattgacaaaagactttaatacacacttcaccaacaagcacatgaaaagatgcttaacatcatta-ccataattaaaaccataaagagataacccttaactcacacaagaatagttatactaaaaaataacaa-g i panTro5.chr17 C 0 I 7966 s nomLeu3.chr20 28443 694 + 85365473 taccaaggatcttttaaatgctacaaattaaaagccagatgaagagatgcacagggtgaggtatgtggaagggatgcacatctcccattccctctccagat-atgatcctccc-agtatct-cctgtgttgagagagcaacacagacgctctcccaaccctgtcctttattacacaggcagattggttacattagtggccataggtgatcaactcaaccttcagcacctctccccttcacagagacaggagaggggaagaaatttcaaatcctgtaatgacaaggttggttcccttggcagccagccccactgaggctgtccaggtacccccagccatcaatcatttcattagcatacgaaagacacatcacttcgtacattcccaaggcttagcgctctgtttcaggacactgcggcaaagaccacacattaACTCTTATTATGTTCCAataacccataaaatggaagaaaaaaatctacacattagatacttcattagtgtctgttatccagaatgtataaataacttttacaactccacaacaaagacaaccaaatctaaaaattgacgaaagactttaatacacacttcaccaataaacacatgaaaagatgcttaacatcatta-tcataattaaaaccatgaagagataccccttaactcacacaagaatagttatactaaaaaataacaa-c i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91744100 672 - 128169293 taccaaggatatttcaaaggctacaaatgaacaaccaaatgaagagatgcacaaggtgaggtatgtgaaagaggtgcaagcctcctaagccctctccagat-atgattctccc-atcatctccccatatt----cagcaacacagatgctctcctaaccctgtcctttattatgcaggcagattggttgcatcagtggccataggtgatcaactcaaccatcagcacctctctccttcacagagatgggaggggagatgaaatttcaaatcctctaatgacaaggttggttcctttggaagccagccccactgagggtgtccaggtgcccccagccatcagttatctcattagcatacaaaagacaca-----tcatatgttccaaaggcttattgctctgtttcagaacaccacagcagagaccacacattaACTCTTACGATGTTCCAataacacacaaaatggaag-aaacaatctgcacattagatacttcaaaagtgtctgttatccagaatgtgtaaataatttttacaactcaacaacaaagacaacccaatctaaaaaatgac-aaggactttcatacacactgcaccaacaagcacctgaaaagatgcttaacatcattagtcataattaaaaccat----aaaaaacccttaaatcacactataatagttatactaaa----------g i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 65553 683 + 223797 taacaaggatattttaaaggctacaagtgaacaaccagatgaagagatgcacaaggtgag----gtggaagaggtgcaagcctcccatgccctctccagataatgattctccc-agcaactccctatatt----cagcaacacagacactctcctaaccctgtcctttattacacaggcagattggttgcatcggtggccataggtgatcaactcaaccaccagcacctctctccttcacagagatgggaggggagatgaaatttcaaatcctttaatgacaaggttggtt-ctttggaagccagccccactgagggtgtccaggtgcccccagccatcagttatctcattagcatacgaaagacaca-----tcatatgttccaaaggtttattgctctgtctcaggatactgcagcagagaccacacattaACTCTTATGATGTTCCAataacccacaaaatggaag-aaaaaatctgcacattagatactttaaaagtgtctgttatccagaatgtataaatagcttttacaacttaacaacaaagacaacccaatctaaaaaatgacaaaggactttcatacactctgcaccaacaagcacctgaaaagatgcttaacatcgttagtcataattaaaaccataaaaaaaaaaaccttaaatcacacaagagtagttatactaaaaaaaaaaaatg i saiBol1.JH378358 N 0 C 0 s cebCap1.NW_016107703v1 361965 653 - 2125214 -gcca----------aaaggctacagatgaacagctagatggagagttgcacaaggtgagatatatggaagggatgcaggtctcccatgccctctccagat-atgatcctccc-agcatctccccatgtt----cagcaacacagacactctctcgatcctgtcctttattacgcaggcagactggttacatcagtggccataggtgatcaa---------------ctctccccttcagagagatgggagggaggatgaaatttcaaatcctttaatgacaaggttggttcctttggcagccagccccactgaggctgtccagatgcccccagccattggtcatgttattagcatacaaaagacacatcacttcatacattctaaaggcttagcactctgtctcaggacacttcggcagagaccacacattaACTCTTATTATGTTCCAATaacccacaaaatggaag-aaatcatctgcacattaaatacttcataagtgtctgttatgcataatgtataaacaacttttac-----aacaaaaaagacaatccaatctaaaaattgacaaaggactttaatacacact---tcaacaagcacctgaaaagatgcttaatatcattagtcataatgaaaaccataaagagataccccttagctcacactagaatagttatactaaaaaaag-----g i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487412v1 56812 679 + 1028614 taccaaggatattttaaaggctgcaaatgaacagccagatgaagagatgcacaaggtgaggtggatggaaggggtgca-gcctcccatgccctctccagat-atgaccctcccaagcatctccctgtgtt----cagcaacacagatgctctgccaaccctgtcgttttttacacaggcaaattggttacatcaggggccacaggtgatcaactcaaccgtcagcacctctacccttcgcagagatgggaggggagatgaaatttcaaatcctctaatgacaagtttggttcctttggtagccaggcccactgagg---------cacccccagccatcagtcatctcatcagcacacgaaagacacatcacttcatacattccaaaggCTTAGCGCTTTGCCTCAGGACACTGGAGCAGAGACCACGCATGAACTCTTATTATGTTCCAataacccacaaaatggaagaaaaaaatcttcacatcagatacttcgtaagtgtctgttatccagaatatataaataacttttacaactcaacaacaaagacaacccaacctaaaaattgacaaaggactttaatacacacttcaccagcaagcacctaaaaagatgcttaacataattgctcataattataaccataaagagatacctcttaactcacactagaa----tacactaaaaaaacacaa-g i aotNan1.NW_018487412v1 C 0 C 0 a score=411416.000000 s hg38.chr3_KI270784v1_alt 65287 375 + 184404 tgttgacaaagatgtgcagaaactt-gaactcttaaacactgcttgtgacaatatgaaatggtgcagcctacgtgtgaaataatttgatgtttcctcataaagttacaaatatatttaccatatgagtcaataattccattcctaggtatataccccaaagacctgaaaacaactgttcaaacaaaaacctgtatgctctttaaatgtgtcaaggtcataaatacgcaggaaagtctggggaacagttccaggaaaagaaaactGGATCCTAATGAAAAAAAAAAAAA-------TACACATTATACTCCCAAGTGTGGCATGAGGTAAAAGTGAAGTGAGTTTGTGGACCGAATTATCATGGAGGAAcaatgctgatttcct s nomLeu3.chr20 29137 374 + 85365473 tgttgacaaagatgtgcagaaactt-gaactcttaaacactgcttgtgacaatacgaaatggtgcagcctatgtgtaaaataattgggtgtgtcttcataaagttacaaataaatttaccatatgactcaatgattccattcctcggtatataccccaaagacctgaaaacaggtgttcaaacaaaaacctatatactctttaaatgtgtcaaggtcataaatatgcaggaaagtctggggaacagttccaggaaaagaaaactGGATCAGAATGAAAAAAAAAAAAA-------ACCACATTATACTCCCAAGTGTT-CAGGAGGTAAAAGTGAAGTGAGTTTGTGGACTGAATTATCATGTAGGAACAATGCTGATTTCCT i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91744772 379 - 128169293 tgttaacaaagatgtgcagaaactt-gaacccttaaacactgcttgtgacaatatgaaatggtgcagtctatgtgtaaaataatttggtgtttcttcaaacagttaccaatagatttacaatatgactcaatgattccattcctaggcatatatcccaaagacctgaagacaggtgttcaaacaaaaacttgtaTGCTCTTTAAATGTGTCAAGGTGACAAATATGCAGGACAGTCTGGGGAACAGTTCCAGGAAAAGAAAACTGGATCAGGATGGAAAAAAAAAAAAAAAA---CACACATTATACTCCTAGGtggggcaggaggtaaaagtgaaatgagattgtagactgcattatcatataggaaccatgctgatttcct i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 66236 378 + 223797 tgttaacaaagatgtgcagaaactt-gaacccttaaacactgcttgtgacaatatgaaacggtgcagtctatgtgtaaaataatttggtgtttctt----cagttaccaatagatttacagtatgactcaatgattccattcctaggcatataccccaaagacctgaagacaggtgttcaaacaaaaacttgtaTGCTCTTTAAATGTGTCAAGGTGACAAATATGCAGGAAAGTCTGGGGAACAGTTCCAGGAAAAGAAAACTGGATCAGAATGAAAAAAAAAAAAAAAAAAAGAACACATTATACTCCTAGGTGGGGCGGGAggtaaaagtgaaatgagtttgtagactgaattatcatataggaaccatgctgatttcct i saiBol1.JH378358 C 0 C 0 s cebCap1.NW_016107703v1 362618 366 - 2125214 tgttggcaaagatgagcagaaactt-gaacacttaaacactgtttgtgacaatatgaaatggtgtagcctatgtgtaaaagaatctggtgtttcttcaaacagttacaaatagatttaccatatgactcaatgattccattcctaggtatataccctaaagacctgaaaacacatgttcaaataaaaatttgtaTGTTCTTTAAATGTGTCGAGGTCATAAATATGCAGGAAAGTCTTGGAAACAGTTCCAGAAAAAGAAAGCCAGATCAGAATGAAAA----------------AACACATTATACTCCTAGGTGGGGGAGGAggtaaaagtgaaatgagtttgtagactgaattatgatgtaggaaccacgccaatttcct i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487412v1 57491 363 + 1028614 tgttgacaaagatgtgcacaaactcaaaacacttaaacactgcttgtgacaatatgaaa---tgcagcctatgtgtaacataagttgatgtttcttcaaagagatacaaatagatttaccatgggactcaataattccattcctaggtatataccccaaagacccgaagacaggtgttcaaacaaaaacttctaTGCTCTTTAAATGTGTCAAGGTCATAAATATGCAGGAAAGTATTGGGAACAGTTCCAGGAAAAGAAAACTGGATCGGAATGAAA-----------------AACACATGATACTGCCAGGTGAGGCAGGAGGCAAAAGTGAAGTGAGTCTGTAGACTGAATCATCATGTAGGAACCACGCTGATTTCCT i aotNan1.NW_018487412v1 C 0 I 67 e panTro5.chr17 10954 7966 + 83181570 I a score=198158.000000 s hg38.chr3_KI270784v1_alt 65662 265 + 184404 gatctaggggttatgtggtagttacctgggagagtgtccatgctttcagtacaacataccggagtatttTGTGGGACACTgcaaatctggtacagcaataactgttggggaacctaagggaagaaacaagttgtactttgtactactactggaagttgcctagaaatatgacattattggaaaataaGTTACTTTTTAAAACAACCATGTCAATACCATGCCAGGAAAGCAGACACATCATTAAAATCCATTACAGAGGCTATAG s nomLeu3.chr20 29511 265 + 85365473 GATCTAGGAGTTACGTGGTAGTTACCTGGGATAGTATCCATGCATTCCATACAATATACCGGAGTATTTTGTGGGACACTGCAAATCTGGTACAGCGATAACTGTTGGGGAATCTAAGGGAAGAAACAAGTTATACTTTGTACTTCTACTGGAAGTTCCCTAGAAATATGACATTATTGGCAAGTAAATTACTTTTTAAAACAACCATATCAATACCATGCCAGGAAAGCAGACACATCATCAAAATCCATTACAGAGGCTATAG i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91745151 265 - 128169293 gatctaggacttatttggtggttacctgggagagtgtctatactttgggtaaaatatactaaagtatttTGTGGGACATTGTAAATCTGGTACAGCAATAATTGCTGTGGAAGCTAAGAGAAGAAACAAGTTATACTTTGTACTGCTACTGGAAGTTTCCTAGAAGTATGACATTATTGGAAAGTAAATAACTTTTTAAAACAACCATATCAATACCATGCCAGGAAAGCAGAGACCTCATCAAAATCCATTATAGAGGCTACAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 66614 265 + 223797 gatctaggagttatgtggtggttacctgggagagtgtctatactttgggtaaaatatactgaagtatttTGTGGAACACTGTAAATCTGGTACAGCAATAATTGCTGCGGAAGCTAAGAGAAGAAACAAGTTATACTTTGTACTGCTACTGGAAGTTTCCTAGAAGTATGACATTATTAGAAAGTAAATTACTTTTTAAAACAACCGTATCAGTACCATATCAGGAAAACAGAGACCTCACCAAAATCCATTATAGAGGCTATAG i saiBol1.JH378358 C 0 C 0 s cebCap1.NW_016107703v1 362984 259 - 2125214 gatctagggattatgtggtggttacctgggagagtgtctgtgctttgggtaaaatatattgaagtatttTGTGGGACACTGTAAATCTGGTATAGTAATAACTGCTGGAGAATCTAAGAGAAGAAACAGGTTGTACTTTGTACTGCTACTGGAAGTTTCCTAGAAGTATAATATTATTGGAAA-CCAGTTATTTTTTAAAACGACCAT-----TTCCATGCCAGGAAAGCAGAGACATGATCAAAATCCATTATAGAGGCTACAG i cebCap1.NW_016107703v1 C 0 C 0 e aotNan1.NW_018487412v1 57854 67 + 1028614 I e panTro5.chr17 10954 7966 + 83181570 I a score=108881.000000 s hg38.chr3_KI270784v1_alt 65927 97 + 184404 TTCAGCCAAAGCTGTAAAACCCTTAAAAAAGTCTCAATGTCAACAGAGTCCACTTAGTAGATATGATTATATTTATTGGTATTAGAGGCCACTGTGT s nomLeu3.chr20 29776 97 + 85365473 TTCAGCCAAAGCTGTGAAACCCTTTAAAAAGTCTCAATGTCAACAGACTTCACTTAGTAGATATTATTACATTTATTAGTATTAGAGGCTACTGTGT i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91745416 97 - 128169293 TTCAGCCAAAGCTGTGAAATCCTTATAAAAGTCTCAATGTCAACAGAGTCCACTTTGTAGATATTATTACATTTATTAGTATTAGAGGCTATTGTGC i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 66879 96 + 223797 TTCAGCCAAAGCTGTGAAACCCTTATAAAAGTCTCAATGTCAACAGACTCCACTTTGTAGATATTGTTATA-TTATTAGTATTAGAGGCTACTGTGA i saiBol1.JH378358 C 0 C 0 s cebCap1.NW_016107703v1 363243 97 - 2125214 TTCAGTCAAAGTTGTGAGACCCTTATAAAAGTCTCAATGTCAACAGAGTCCTCTTAGTAGATATGATTATATTTATTGGTATTAGAGGCTACTGTGT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487412v1 57921 94 + 1028614 TTCAGCCACAGCTGTGAAACCCTTATGGAAGTCTCAATGTCAAGAGAGTCCACTTGGTAGATA---TTATATTTATTAGTATTAGAGGCTACTGTGT i aotNan1.NW_018487412v1 I 67 I 21 e panTro5.chr17 10954 7966 + 83181570 I a score=33583.000000 s hg38.chr3_KI270784v1_alt 66024 53 + 184404 CAATATATTACTGTTAGGGCATGCTATGGATATTTAGATTAGTGTTAGGGAAT s nomLeu3.chr20 29873 53 + 85365473 GGATATACTAGTGTTAGGGCACGGTATGGATATTTAGATAAGTGTTAGGGAAT i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91745513 52 - 128169293 AGATATATTAGTGTTGTGGCATGGTGTGGATA-TTAGATTAGTGTTAGGGCAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 66975 52 + 223797 GGATATATTAGTGTTGTGGCATGGTGTGGATA-TTAGATTAGTGTTAGGGCAT i saiBol1.JH378358 C 0 C 0 s cebCap1.NW_016107703v1 363340 50 - 2125214 GAATATATTAGTGTTATGGCATG--ATGGCTA-TTAGATTAGTGTTAGGGCAT i cebCap1.NW_016107703v1 C 0 C 0 e aotNan1.NW_018487412v1 58015 21 + 1028614 I e panTro5.chr17 10954 7966 + 83181570 I a score=22303.000000 s hg38.chr3_KI270784v1_alt 66077 23 + 184404 GGTGTGGATATTGTATCGGTGTT s nomLeu3.chr20 29926 23 + 85365473 GGTGTGGATATTGTATTGGTGTT i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91745565 23 - 128169293 GATGTGGATATTTTACTGGTGTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 67027 23 + 223797 GGTGTGGATATTATACTGGCATT i saiBol1.JH378358 C 0 C 0 s cebCap1.NW_016107703v1 363390 23 - 2125214 GGTGTGGATATGATTTTCGTGTT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487412v1 58036 23 + 1028614 GGTGTGTGTATTATATTGGTGTT i aotNan1.NW_018487412v1 I 21 C 0 e panTro5.chr17 10954 7966 + 83181570 I a score=8829.000000 s hg38.chr3_KI270784v1_alt 66100 16 + 184404 GGGGAATGGTGCAGAT s nomLeu3.chr20 29949 16 + 85365473 GGGGAATGGTGCAGAT i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 363413 16 - 2125214 GGGAAATGGTGCAGAT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487412v1 58059 16 + 1028614 GGGGAATGGTGCAGAT i aotNan1.NW_018487412v1 C 0 C 0 e calJac3.chr8 91745588 0 - 128169293 C e saiBol1.JH378358 67050 0 + 223797 C e panTro5.chr17 10954 7966 + 83181570 I a score=24673.000000 s hg38.chr3_KI270784v1_alt 66116 35 + 184404 ATTACATTAGTGTTAGGGCATGGTGTGGATATTAT s panTro5.chr17 18920 35 + 83181570 ATTACATCAGTGATAGGGCATGGTGTGGATATTAT i panTro5.chr17 I 7966 I 251 s nomLeu3.chr20 29965 35 + 85365473 ATTACATTAGTGTTAGGACATGGTGTGGATACTAT i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 363429 32 - 2125214 ATTACATTAGTGTTAGGGCATGGTGTGGAT---AT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487412v1 58075 35 + 1028614 ACTACTTTAGTGTTAGGGCACAGTGTGGATATGAT i aotNan1.NW_018487412v1 C 0 C 0 e calJac3.chr8 91745588 0 - 128169293 C e saiBol1.JH378358 67050 0 + 223797 C a score=16872.000000 s hg38.chr3_KI270784v1_alt 66151 20 + 184404 TACATTAGTATTAGAAGCGA s panTro5.chr17 19206 20 + 83181570 TACATTAGTATTGGAAGCGA i panTro5.chr17 I 251 C 0 s nomLeu3.chr20 30000 20 + 85365473 TACATTAGTATTAGAAGCGA i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 363461 20 - 2125214 TACATAAGTATTAGAAGCGA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487412v1 58110 20 + 1028614 TACATTAGTATTAGAAGCAA i aotNan1.NW_018487412v1 C 0 C 0 e calJac3.chr8 91745588 0 - 128169293 C e saiBol1.JH378358 67050 0 + 223797 C a score=13060.000000 s hg38.chr3_KI270784v1_alt 66171 10 + 184404 TGGTGTGGAT s panTro5.chr17 19226 10 + 83181570 TGGTGTGGAT i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01004482v1 0 10 - 30167 TGGTGTGGAT i gorGor5.CYUI01004482v1 N 0 C 0 s nomLeu3.chr20 30020 10 + 85365473 TGGTGTAGAT i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 363481 10 - 2125214 TGGTGTGGAT i cebCap1.NW_016107703v1 C 0 I 2 s aotNan1.NW_018487412v1 58130 10 + 1028614 TGGTGTGGGT i aotNan1.NW_018487412v1 C 0 C 0 e calJac3.chr8 91745588 0 - 128169293 C e saiBol1.JH378358 67050 0 + 223797 C a score=22385.000000 s hg38.chr3_KI270784v1_alt 66181 33 + 184404 TAGATCAGTGATAGGGCATGGTGTGGATATTAT s panTro5.chr17 19236 33 + 83181570 TAGATCAGTGATACGGCATGGTGTGGATATTTT i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01004482v1 10 32 - 30167 TAGATCAGTGATA-GGCATGGTGTGGATATTAT i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 30030 33 + 85365473 TAGATCAGTGTTAGAGCATGGTGTGGATATTAT i nomLeu3.chr20 C 0 C 0 s aotNan1.NW_018487412v1 58140 30 + 1028614 ---ATTAGTGTTAGGGTATGGTGTGGAGATTAT i aotNan1.NW_018487412v1 C 0 I 8 e cebCap1.NW_016107703v1 363491 2 - 2125214 I e calJac3.chr8 91745588 0 - 128169293 C e saiBol1.JH378358 67050 0 + 223797 C a score=146009.000000 s hg38.chr3_KI270784v1_alt 66214 300 + 184404 TACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCTGTGATCGGGCATGGTGTGGATATTACTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTACTACATTAGTATTGGAAGCCATGGTGTGGATTAGATCACTGATAGGGCATGGTGTGGATATTATCACATTAGTATTGGAAGTGATGGTGTGGACTAGATCAGTGATAGGGCA s panTro5.chr17 19269 300 + 83181570 TACATTAGTATTGGAAGCGATGGTGGGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGTAGATTATTACATTAGTATTGGAAGCAATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTACTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGCTGTGGATAGTATTACATTAGTATTGGAAGAGATGGTGTGGACTAGATCAGTGATAGGGCA i panTro5.chr17 C 0 I 251 s gorGor5.CYUI01004482v1 42 299 - 30167 TACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGA-TAGATCAGTGATAGGGCA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 30063 300 + 85365473 TACATTAGTATTAGAAGCAATGGTGTGGATTAGATCAGTGTTAGAGCATGGTGTGGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGACCATGGTGTGGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGACCATGGTGTGGATATTATTGCATTAGTATTAGAAGCAATGGTGTGGATTAGATCAGGGTTAGAGCATGGTGTGGATATTATTACATTAGTATTAGAAGCAATGGTGTGGATTAGATCAGTGTTAGAGCA i nomLeu3.chr20 C 0 C 0 e aotNan1.NW_018487412v1 58170 8 + 1028614 I e cebCap1.NW_016107703v1 363491 2 - 2125214 I e calJac3.chr8 91745588 0 - 128169293 C e saiBol1.JH378358 67050 0 + 223797 C a score=96035.000000 s hg38.chr3_KI270784v1_alt 66514 198 + 184404 TGGTGTGGATATTACTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGTTAGGGCATGGTGTGGATAT------------------------TATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTACTACATTACTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGA s panTro5.chr17 19820 198 + 83181570 TGGTGTGGATATTAGCATATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGCCATGGTGTGGATAT------------------------TACTACATAAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGCTGTGGATATTATTACATTAGTATTGGACGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGA i panTro5.chr17 I 251 I 937 s gorGor5.CYUI01004482v1 341 222 - 30167 TGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATTTATTTTTTTTTTTTTAGGATGTGTATATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 30363 198 + 85365473 TGGTGTGGATATTATTACATTAGTATTAGAAGCAATGGTGTGGATTAGATCAGTGTTAGAGCATGGTGTGGATAT------------------------TATTACATTAGTATTAGAAGTGATGGTGTAGATTAGATCAGTGTTAGGGCATGGTGTGGATATTATTACATTAGTATTAGAAGTGATGGTGTAGATTAGATCAGTGTTAGGGCATGGTGTGGA i nomLeu3.chr20 C 0 C 0 e aotNan1.NW_018487412v1 58170 8 + 1028614 I e cebCap1.NW_016107703v1 363491 2 - 2125214 I e calJac3.chr8 91745588 0 - 128169293 C e saiBol1.JH378358 67050 0 + 223797 C a score=85150.000000 s hg38.chr3_KI270784v1_alt 66712 394 + 184404 TATTATTACATTAGTATTGGAAGCGATGGTGTGGAGTACATCAGTGTTAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGCTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGCTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGG-----ACTAGATCAGTGATAG--GGCATGCTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGG-----ACTAGATCAGTGATAG--GGCATGCTGTGGATATTATTACATTAGTA s gorGor5.CYUI01004482v1 563 393 - 30167 TATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTAT-ACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGG-----ACTAGATCAGTGATAG--GGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGG-----ACTAGATCAGTGATAG--GGCATGGTGTGGATATTATTACATTAGTA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 30561 408 + 85365473 TATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGAGCATGGTGTGGATATTATTGCATTAGTATTAGAAGCAATGGTGTGGATTAGATCAGGGTTAGAGCATGGTGTGGATATTATTGCATTAGTATTAGAAGCAATGGTGCGGATTAGATCAGTGTCAGACCATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGACCATGGTTTAGATATTATTGCATTAGTATTAGAAGCGATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTTTAGATATTATTACATTAGTA i nomLeu3.chr20 C 0 C 0 e aotNan1.NW_018487412v1 58170 8 + 1028614 I e cebCap1.NW_016107703v1 363491 2 - 2125214 I e calJac3.chr8 91745588 0 - 128169293 C e saiBol1.JH378358 67050 0 + 223797 C e panTro5.chr17 20018 937 + 83181570 I a score=7504.000000 s hg38.chr3_KI270784v1_alt 67106 122 + 184404 TTGGAAGTGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCATTGATAGGGCATGGTGCGAATATTAT---ATGGGT s nomLeu3.chr20 30969 125 + 85365473 TTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGACCATGGTTTAGATATTATTACATTAGTATTAGAAGCGATGGTGTGGATTAGATCAGGGTTAGACCATGGTTTAGATATTATTGCATTAGT i nomLeu3.chr20 C 0 I 170 e aotNan1.NW_018487412v1 58170 8 + 1028614 I e cebCap1.NW_016107703v1 363491 2 - 2125214 I e calJac3.chr8 91745588 0 - 128169293 C e saiBol1.JH378358 67050 0 + 223797 C e gorGor5.CYUI01004482v1 956 0 - 30167 C e panTro5.chr17 20018 937 + 83181570 I a score=671.000000 s hg38.chr3_KI270784v1_alt 67228 11 + 184404 GTTAGGGCACA s nomLeu3.chr20 31264 11 + 85365473 GTTAGAGCATG i nomLeu3.chr20 I 170 C 0 e aotNan1.NW_018487412v1 58170 8 + 1028614 I e cebCap1.NW_016107703v1 363491 2 - 2125214 I e calJac3.chr8 91745588 0 - 128169293 C e saiBol1.JH378358 67050 0 + 223797 C e gorGor5.CYUI01004482v1 956 0 - 30167 C e panTro5.chr17 20018 937 + 83181570 I a score=31165.000000 s hg38.chr3_KI270784v1_alt 67239 149 + 184404 GTGTGGATATTATTACATTAATATTGGAAGCGATGGTGTGG-----ATTACATCAGTGTTAG--GGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTACATCAGTGTTAGGGCATGGTGTGGATATTATTACATTAGTT s panTro5.chr17 20955 149 + 83181570 GTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGG-----ATTAGATCAGTGTTAG--GGCATGATGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTACATCAGTGATAGGGCATGGTGTGGCTATTATTACATTAGTA i panTro5.chr17 I 937 C 0 s nomLeu3.chr20 31275 156 + 85365473 GTTTAGATATTATTGCATTAGTATTAGAAGCGATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGACCATGGTTTAGATATTATTACATTAGTA i nomLeu3.chr20 C 0 C 0 e aotNan1.NW_018487412v1 58170 8 + 1028614 I e cebCap1.NW_016107703v1 363491 2 - 2125214 I e calJac3.chr8 91745588 0 - 128169293 C e saiBol1.JH378358 67050 0 + 223797 C e gorGor5.CYUI01004482v1 956 0 - 30167 C a score=8547.000000 s hg38.chr3_KI270784v1_alt 67388 18 + 184404 TTGGAAGCGATGGTGTGG s panTro5.chr17 21104 18 + 83181570 TTGGAAGCGATGGTGTGG i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01004482v1 956 18 - 30167 TTGGAAGCGATGGTGTGG i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 31431 18 + 85365473 TTAGAAGTGATGGTTTAG i nomLeu3.chr20 C 0 I 180 e aotNan1.NW_018487412v1 58170 8 + 1028614 I e cebCap1.NW_016107703v1 363491 2 - 2125214 I e calJac3.chr8 91745588 0 - 128169293 C e saiBol1.JH378358 67050 0 + 223797 C a score=726.000000 s hg38.chr3_KI270784v1_alt 67406 2 + 184404 AT s panTro5.chr17 21122 2 + 83181570 AC i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01004482v1 974 2 - 30167 AT i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 31629 2 + 85365473 AT i nomLeu3.chr20 I 180 C 0 e aotNan1.NW_018487412v1 58170 8 + 1028614 I e cebCap1.NW_016107703v1 363491 2 - 2125214 I e calJac3.chr8 91745588 0 - 128169293 C e saiBol1.JH378358 67050 0 + 223797 C a score=15315.000000 s hg38.chr3_KI270784v1_alt 67408 25 + 184404 TACATCAGTGTTAG--GGCATGGTGTG s panTro5.chr17 21124 25 + 83181570 TAGATCAGTGATAG--GGCATGGTGTG i panTro5.chr17 C 0 N 0 s gorGor5.CYUI01004482v1 976 25 - 30167 TACATCAGTGTTAG--GGCATGGTGTG i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 31631 27 + 85365473 TACATTAGTATTAGAAGTGATGGTGTG i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 363493 25 - 2125214 TAGATTAATGTTAG--GGTATGGCGTG i cebCap1.NW_016107703v1 I 2 C 0 e aotNan1.NW_018487412v1 58170 8 + 1028614 I e calJac3.chr8 91745588 0 - 128169293 C e saiBol1.JH378358 67050 0 + 223797 C a score=15985.000000 s hg38.chr3_KI270784v1_alt 67433 37 + 184404 AATATTATATAGGTGTTAGGACACGGTGTGGATATCA s gorGor5.CYUI01004482v1 1001 37 - 30167 GATATTATATGGGTGTTAGGGCACGGTGTGGATATCA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 31658 37 + 85365473 GATATTATACTGGTGTTAGGGCACGGTGTGGATATCA i nomLeu3.chr20 C 0 I 1 s cebCap1.NW_016107703v1 363518 37 - 2125214 GCTACTATATTGATGTTAAGACACGGTGTAGCTATCA i cebCap1.NW_016107703v1 C 0 C 0 e aotNan1.NW_018487412v1 58170 8 + 1028614 I e calJac3.chr8 91745588 0 - 128169293 C e saiBol1.JH378358 67050 0 + 223797 C a score=273.000000 s hg38.chr3_KI270784v1_alt 67470 1 + 184404 T s gorGor5.CYUI01004482v1 1038 1 - 30167 T i gorGor5.CYUI01004482v1 C 0 C 0 s cebCap1.NW_016107703v1 363555 1 - 2125214 T i cebCap1.NW_016107703v1 C 0 C 0 e aotNan1.NW_018487412v1 58170 8 + 1028614 I e calJac3.chr8 91745588 0 - 128169293 C e saiBol1.JH378358 67050 0 + 223797 C e nomLeu3.chr20 31695 1 + 85365473 I a score=3288.000000 s hg38.chr3_KI270784v1_alt 67471 7 + 184404 AGTAATG s gorGor5.CYUI01004482v1 1039 7 - 30167 AGTAATG i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 31696 7 + 85365473 AGTAATG i nomLeu3.chr20 I 1 C 0 s cebCap1.NW_016107703v1 363556 7 - 2125214 ATTAATG i cebCap1.NW_016107703v1 C 0 C 0 e aotNan1.NW_018487412v1 58170 8 + 1028614 I e calJac3.chr8 91745588 0 - 128169293 C e saiBol1.JH378358 67050 0 + 223797 C a score=910.000000 s hg38.chr3_KI270784v1_alt 67478 1 + 184404 T s gorGor5.CYUI01004482v1 1046 1 - 30167 T i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 31703 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 363563 1 - 2125214 T i cebCap1.NW_016107703v1 C 0 I 1 s aotNan1.NW_018487412v1 58178 1 + 1028614 T i aotNan1.NW_018487412v1 I 8 C 0 e calJac3.chr8 91745588 0 - 128169293 C e saiBol1.JH378358 67050 0 + 223797 C a score=602829.000000 s hg38.chr3_KI270784v1_alt 67479 421 + 184404 AGGGCAC---------------------AGTGTGATTATTATATTAGAGGCCACTGTAAGAATATATATTAACAGCCACTGTGTCTTGGACGTTGACAATGATATTAGGGTGTACTCCAAACAGTGAGATTTGGGGGTTTTATTTTTCTAGATGAATTTCTTCCTCTGCTGAGTACTCTAAAGACTCACTCCTTGGCACTCAGGGCCGTGGACAGG-AGCTTTTTACTCACCAATGAAGAACACCAAGTTAACACGACCCTCGTGCTGCCCTGAGGAAGCTGAAGCTCCTCGCTGCTTCTGGCACCTCAGCGGGAAGTTGG-TTGGGGCGGGATCGCGCGCCCTCTGGTGGCGCCATGGTTCAGCACAGACGCTCTTGCTCACAGTTTCTCGGCGGATGTGCGCC---CCCTCCTGGCTGTCCTGAAATACCTATAAAATTCAATAT s gorGor5.CYUI01004482v1 1047 420 - 30167 AGGGCAC---------------------AGTGTGATTATTATATTAGAGGCCACTGTAAGAATATATATTAGCAGCCACTGTGTCTTGGACGTTGACAATGATATTAGGGTGTACTCCAAACAGTGAGATTTGGGG-TTTTATTTTTCTAGATGGATTTCTTCCTCTGCTGAGTACTCTAAAGACTCACTCCTTGGCACTCAGGGCCGTGGACAGG-AGCTTTTTACTCACCAATGAAGAACACCAAGTTAACACGACCCTCGTGCTGCCCTGAGGAAGTTGAAGCTCCTCGCTGCTTCTGGCACCTCCGCGGGAAGTTCG-TTGGGGCGGGATCGCGCGCCCTCTGGTGGCTCCGTGGTTCAGCACAGACGCTCTTGCTCACAGTTTCTCGGCGGATGTGCGCC---CCCTCCTGGCTGTCCTGAAATACCTATAAAATTCAATAT i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 31704 443 + 85365473 AGGGCACATGACTACACAGTAATGTAATAATGTGATTATTATATTAGAGGCCACGGTAAGAATATATATTAGCAGCCACTGTGTCTTGGACGTTGACAATGATATCAGGGTGTGCTCCAAACAGTGAGATTTGGTGGTTTTATTTTTCTAGATGAATTTCTTCCTCTGCTGAGTACTCTAAAGACTCACTCCTCGGCACTCAGGGCCGTGGACAGGAAGCTTTTTACTCACCAATGAAGAACACCAAGTTAACACGACCCTCGTGCTGCCCTGAGGAAGGTGAAGCTCCTCGCCGCTTCTGGCACCTCAGCGGGAAGTTGG-TTGGGGCGGGATCGCGCGCCCTCTGGTGGCGCCATGGTTCAGCACAGACGCTCTTGCTCACAGTTTCTCGGCGGATGCGCGCC---CCCTCCTGGCTGTCCTGAAATACCTATAAAATTCAATAT i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91745588 417 - 128169293 AGGGCAT---------------------GGTGTGATTACTATATTAGAGGCCACTGTGACAATATATATTAGCAGCCACTGTGTCTTGGACACTGACA---ATATCAGGGTCTAGTCAAAACAGTGGGATTTAAGGGTTTCATTTTTCTAGATGGATTTCTTCCTCTGCTGAGTACTCTCTAGACTCTCTCCTCTGTACTCAGGGCGGCGGACAGGAAGCTTTTTACCCACCAATAAACAACACCAAGTTGACAAGACCCCCATGCTGCCCTGAGGAAGATAAAGCTCCTTGCTGCTTCTGGCACCTCAGAGGGAAGTTGGTCAGGAGTCCGTGCATGCCCCCTCTGGTGGCACCAGGGCTCAGCACAGA------TGCTCACAGTTTCACAGCGGATGTGCACCTCTCCCCCACAGATGTCCTGAAATACCTATAAAATTCAATAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 67050 417 + 223797 AGGGCAC---------------------AGTGTGATTACCATATTAGAGGCCACTGTGAGAATATATATTAGTAGCCACTATGTCTTGGACACTGACA---ATATCAGGGTTTAGTCAAAACAGTGGGATTTAAGGGTTTCATTTCTCTAGATGGATTTCTTCCTCTGCTGAGTACTCTCTAGA--CTTTCCTCTGCAGTCAGGGCGGCAGACAGGAAGCTTTTTACCCACCAATAAACGACACCAAGTTGACACGACCCTCATGCTGCCCTGAGGAAGATAAAGCTTCTTGCTGCTTCTGGCACCTCAGAGGGAAGTTGGTCAGGAGTGGGTACATGCGCCCTCTCGTGGCACCAGGGCTCAGCACAGACACTGTTGCTCACAGTTTCACAGTGGATATGTAC----CCCCACCAGATGTCCTGAAATACCTATAAAATTCAATAT i saiBol1.JH378358 C 0 C 0 s cebCap1.NW_016107703v1 363565 386 - 2125214 AAGGCAT---------------------GGTGTGATTATTATATTAGAGGCCACCGTGAGAACATGTATT---AGCCACTGTGTCTTGGACGTTGATAATGATATCAGGGAATAGTCAAAACAGTGGGATTTGGGGGTTTCATTTTT-----TGAATTTCTTCCTCTGCTGAGTACTCTAAAGACTCTCTCCTCTGCACTCAGGGCTGTAGACAGGAAGCTTTTTACTCACCAATGAACGACACCAAGTTGACACGACCCTCATGCTGCCCTGAGGAAGATAAAGCTCCTGGCTGCTTTTGACACCTCAGAGGGAAGCTGGTCGGGGGTGGGTTCGTG----------------------------CAGACGCTCTTGCTCACAGTTTCTCGGCAGAGGTGCGCC---CCCTCCTGGCTGTCCTGAAAT-CCTATAAAATTCAATAT i cebCap1.NW_016107703v1 I 1 C 0 s aotNan1.NW_018487412v1 58179 416 + 1028614 AGGGCAC---------------------AGGATGATTATTATATTAGAGGCCACTGTGAGAATATGTGTTAGCAGCCACTGTGTCTTAGACATTGACA---ATATCAGGGTGTAGTCAAA--AATGGGATTTGAGGGCTTCATTTTTCTAGATGAATTTCTTCCTCTGCTGAGTACTCTAAAGAC-CTCTCCTCTGCACTCAGGGCCATGGACAGGAAGCTTTTTACTCACTAATGAACGACACCAAGTTGACATCACCCTCGTGCTTCTCTGAGGAAGATAAAGCTCCTTGCTGCTTCTGGAACCTCAGAGGGAAGTTGA-CTGGGGTGGCTTCGTGCGCCCTCTGGTGGTGCCAGGGCTCAGCACAGACGCTCTCACTCACAGCTTCTCAGTGGGTACGCGCC---CCCTCCTGGTTGTCCTGAAGTACCTATAAAAGTCAATAT i aotNan1.NW_018487412v1 C 0 I 303 a score=229553.000000 s hg38.chr3_KI270784v1_alt 67900 147 + 184404 TCAGTTTATTCAGTGTCATAATTTTGGAAATTCAAACCGAAATAAAGGCCAGTATATCCATACccttcccataaatggtgatggaagaattatttggaagccatatagaatgaaatgactctatacacaaattaaaacac-----------------------------------------aaaaacc s gorGor5.CYUI01004482v1 1467 146 - 30167 TCAGTTTATTCAGTGTCATAATTTTGGAAATTCAAACCGAAATAAAGGCCACTATATCCATACccttcccataaatggtgatggaagaattatttggaagcca-atggaatgaaatgactctatacacaaattaaaacac-----------------------------------------aaaaacc i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 32147 188 + 85365473 TCAGTTTATTCAGTGTCATAATTTTGGAAATTCAAACCAAAATAAAGTCCACTATATCCATATCCTTCCCATAAATGGTGATGGAAGAATTATTTGGAAGCCATATAGAATAAAATGAGTGCATACACAAATTAAAACACAAAAACCTAAAACTTAAAGTATAATAATAAAAAAATTTAAAaaaaacc i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91746005 147 - 128169293 TCAGTTTATTCAATGTCATAATTTTGGAAATTCAAACTAAAATGAAGCTCACTATAACCATAtccttccaaaaaatggtgatggaagaattatttggaagccatatagaatgaaatgaatgtacacacaaattaaaacac-----------------------------------------aaaaacc i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 67467 147 + 223797 TCAGTTTATTCAATGTCATAATTTTGGAAATTCAAACTAAAATGAAGCCCACTATAACCATATCCTTCCAAAAAATGGTGATGGAAGAATTATTTGGAAGCCATATAGAATGAAATGAATGTACACACCAATTAAAACAC-----------------------------------------AAAAAcc i saiBol1.JH378358 C 0 I 3872 s cebCap1.NW_016107703v1 363951 146 - 2125214 TCAGTTTTTTCAGTGCCATAATTATGGAAATTCAAACCGAAATGAAGCCCACTATATCCatatccttcccaaaactggtgatggaagaatcacttggaagccatatagaatgaaatgaatgtatacacaaattaaaacac-----------------------------------------aaaacc- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487412v1 58898 147 + 1028614 TCAGTTTATTCAATGCCATAAGTTGGGAAATTCAAACCAAAATGAAACCCACTATATCCatatccttcccaaaaatgctgatgaaagaattatttggaaaccatatagaatgaaatgaatgtacacaaaaattaaaacac-----------------------------------------aaaaacc i aotNan1.NW_018487412v1 I 303 C 0 a score=602170.000000 s hg38.chr3_KI270784v1_alt 68047 689 + 184404 tactcaaaatactccagagactacaacttcaattgcaaaactataaataacctaaaagaaaacctaagagacattggatctggtgttgagtttttacacacagcatcaagtgccaattcgtgaaaatactgaga--ac---agactttataaaactaaattttctactatgaaaaaccctattcagagaacaaaaagacaagacacactgtcagaagatatttacaaaatacaaacgtgattttaaaaactgtattgaaaatacacaaagaactcttcaaacgaacactaagaaaactaaaaacccaaataaaactgggtaaatatctgaacagacatccagccaaataaaatatatagatagcaggccaggt---gtggtggctcatgcctataaccccagcactttgggaggctgaggcgggtgagtcacctgaggtcaggaatttgagatcagcctggccaacatagtgataccccc--------tctctactaaaaa---tacaaaaaaattagccaggcatggtggtgggtgcctgtaatcccagctacttgggaggctgatgcaagagaattgcttgaacat---tggaggtagaggttgcagtgacccaagatcacgccactgcactccagcctgagtgacagaacgagactctatctcaat---aaaaaaaaa--------------------------------------agaaaaaagaaaaaaaag-------aaaatatacagatag s gorGor5.CYUI01004482v1 1613 684 - 30167 tactcaaaatagtccagagactacaacttcaaatgcaaaact----ataatctaaaagaaaacctaagagacattggatctggtgttgagttttaacacacagcatcaagtgccaattcgtgaaaatactgaga--ac---agactttataaagctaaattttctactatgaaaaaccctattcagagaacaaaaagacaagacacactgtgagaagatattta-aaaatacaaacgtgattttaaaaactgtattgaagatacacaaagaactcttcaaacgaacactaagaaaactaaaaacccaaataaaactgggtaaatatctgaacagacatccagccaaataaaatgtatagatagcaggccaggt---gtggtggctcatgcctataaccccagcactttgggaggctgaggcgggtgagtcacctgaggtcaggaatttgagatcagcctggccaacatagtgataccccc--------tctctactaaaaa---tacaaaaaaattagccacgcatggtggtgggtgcctgtaatcccagctacttgggaggctgatgcaagagaattgcttgaacat---cggaggtggaggttgcagtgacccaagatcacgccactgcactccagcctgagtgacagaacgagactctatctcaat---aaaaaaaaa--------------------------------------agaaaaaagaaaaaaaag-------aaaatatacagatat i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 32335 689 + 85365473 tactcaaaatagtccagagactataatttcaaatgcaaaact----ataatctaaaggaaaacctaagtgacactggagttggtgttgagttttaacacatagcatcaaatgccaattcgtgaaaatactgagaacac---agactttataaaactaaattttctactgtgaaaaaccctattcagagaacaaaaacacaggacacactttgagaagatatttacaaaatacaaacgtgattttaaaaactgtactgaaaatacacaaagaactcttcaaaggaacactaagaaaactaaaaaccc-aataaaactgggtaaatatatgaacagacacccagcaaaagaaaatgtatagatagcaggccaggt---gtggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggtgagtcacctgaggttaggaattcgagatcagcctggccaacatagtgataccccc--------tctctactaaaaa---tac-aaaaaattagccaggcgtggtggtgggtgcctgtaatcccacctacttgggaggctgatgcaggagaatggcttgaacat--gggggggtggaggttacagtgagccaaaatcccgccactgcactccagcctgagtgacagaacgagactccatctccattaaaaaataaaa--------------------------------------agaaaaaagaaaaaaacc-------aaaatatacagatag i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91746152 677 - 128169293 tactcaaaacagtccagagactataacttaaaatgcaaaactataaaaaatcaaaaataaaatctatgtaatattgggtttggtgttgagttttaacacacaacatcaaacaccaattcatgaaaatattcataacacagaagactttataaaactcaattctctactgtgaaaaatcttattcagag---aaaaagacaagacagactgtgagaagacatttacaaaatacatatgtgatttgaaaaactgtattgaaaatacacaaataactctttaaaggaacact---------aaaaattt----taaact-------------------------------------------------ggctggac---acagtggctcacacctgcagtcccagcactttaggaagccgaggcaggcagatca--tgaggtcaggagttcaaaaccagactgggtggtatagtaaaccccccccccaccatctctactaaaa----tac-aaaaaattagccaggcaaggtggcatgcaattgtaatcccagctacttggtaggctgaggtggaa-aattgcttgaacca---agggagcagagattgtactgagccaaaattctgccactgcacttcagcctgcgtgacagagtgaaactccatttcaaa---ataaaaaaaaaaaactaaaatgaaaaacccaattaaaactgggtaaatgtctgaacagacacccagccaaagaaaatatacagatag i calJac3.chr8 C 0 I 1261 s cebCap1.NW_016107703v1 364097 687 - 2125214 tactcaaaatagtccagagactataatttaaaatgc-aaactataaaagatctaaaagaaaatctatgtgacactggggttggtgttgagttctaacatataaaatcaaatgccaattcgtgaaaatgttcataacac---agactttacaaaactcaattttcttctgtgaaaaatcctatccagagaacaaaaagacaagacagactgtgagaagatatttacaaaatacatatgtgattttaaaaactgtattaaaaatacacaaagaactcttcaaaggaacactaaaataaccaaaaaccc----cagactgggtaagtacctgaactgacacccagccaaagaaaata-----atc-caggcgaggc---gtgatgactcatgactgtaatcccagtactctgggagactaaagcaggtggatcatctggggtcaggaattcaagatcagcctggccaacatggtgaaaccccc--------tctctactaaaaatatttt-aaaaa--tagccaggcatggtggttggtgcctgtaatcccagctacttgggcagctgaggcaaaataattgcttgaacaagagaggaggtggaggttgcagtgagcagaaactgcaccactgcactccagcctgggtgacagagtgagaagctgtctcaaa---ataaataaa----------------------------------taaataaataaataaataacca-------aaaatatacagatag i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487412v1 59045 659 + 1028614 tactcaaaatagtccaaagactataattggaaatgcaaaactataaaaacccttaaaaaaaatctatgtgacattgggtttggtgttgagttttcacacacagcatcaaattccaattcatgacaacagtcataacac---agactttataaaaatcaattttctactgtgaaaaatcctattcagag---aaaag--------agactgtgagaagatatttacaaaatacatatgtgattttaaaaactgtattgaaaatacacaaataactcttcaaaggaacactaaaa-----ctaaaatt----aaaatggggtaaatatctgaacagacacccagccaaataaaaca--cagatagcatgctgggcattgtggtggctcatgcctgtaatcccatcactttgggaggctgaggcggctggatcacctaaggtcaggagtttcagatcagcatggccaacatggtgaaaaccccc-------tctctactaaaaa---tat-aaaatattagccagacgtggtggtgtgcgcctgtaatcccagctacttgggaggctgaggcaaaagaattgcttgaacat---gggaggcagagtttgcagtgagctgacattgcaccattgcactccagcctgaatgacagagtgagacactgtgtcaaa---aaaaaaaaa---------------------------------------------------aacgg-------aaaatatagagatag i aotNan1.NW_018487412v1 C 0 C 0 e saiBol1.JH378358 67614 3872 + 223797 I a score=670502.000000 s hg38.chr3_KI270784v1_alt 68736 959 + 184404 cacataatcacacaaaaggatgctcaatat---atctcattaggagactgcaaattaaaataatgctgagatatcactgcacacctagtacaactgtgggactct-t-aaaaaagctcaacagtaaaaattggaggttgaagaacaataggtacggccattcattactggcagaatgcatgaatgggtacagccactttgggaaatagtttgacagtttttcccaaagataaacaagtcttaccttacaatccaacaaatgca-cccctaaattgtgtatgtttagacagctgctttgaaaaattatgttcaaacaaaaactagcatgtaattatatacgagccactctactcataatggccaaaacttgaagtaatcagaacgttcttcaatagctgaatgcataatcaatttgaagtacaaccatgcaatggaataccattcaccaacagaaaggaatgaactgtcaatccatgaaaacaaatgaatgaatcttgcatctatgttgctaagtaaagggtggcagtatgaagatgctatacattatatgactccattcatataacattctggaaaaagcacaaccaaagagatgatagtcagatcagtgactgt-ctggggtggggatttgaagtattctgtatgctacttcagtagtggatatctgacactatgcatttgataaaacccacagaattttaatgcacaaagaacaaatcacaacctacacaaattaaattatttaggatgtggaagtatctaaggacaaaatacagagtgcaaccaagaatctaactgtattaccaatgtatgttgcaagtggtgggccaaaggtgctgagc----------tggaaatgagtagaatccatagactaaaaacaaaacgtactatatacacgaacagtggactctattttataaagttatttcccatagggataatagttaattttgaaactactataTCtgtaa s gorGor5.CYUI01004482v1 2297 957 - 30167 cacataatcacacaaaaggatgctcaatat---atctcattaggagactgcaaattaaaataatgctgagatatcactgcacacctagtacaactgtggtactct-t-aaaaaagctcaacagtaacaattggaggttgaagaacaataggtacggccattcattactggcagaatgcatgaatgggtacagccactttgggaaatagtttgacagtttttcccaaagataaacaagtcttaccttacaatccaacaaatgca-cccctaaattgtgtatgtttagacagctgctttgaaaaattatgttcaaacaaaaactagcatgtaattatatacgagccactctactcataatggccaaaacttgaagtaatcagaacgttcttcaatagctgaatgcataatcaatttgaagtacaaccatgcaatggaacaccattcaccaacagaaaggaatgaactgtcaatccatgaaaacaaatgaatgaatcttgcatctatgttgctaagtaaagggtggcagtatgaagatg-tatacattatatgactccattcatataacattctggaaaaagcacaaccaaagagatgatagtcagatcagtgactgt-ctggggtggggatttgaagtattctgtatgctgcttcagtagtggatatctgacactatgcatttgataaaacccacagaattttaatgcacaaagaacaaatcacaatctacacaaattaaatgatttaggatgtggaagtatctaaggacaaaatacagagtgcaaccaagaatcgaactgtattaccaatgtatgttgcaagtggtgggccaaaggtgctgagc----------tggaaatgagtagaatccatagactaaaaacaaaacgtactatatacac-aacagtggactctattttataaagttatttcccatagggataatagttaattttgaaactactatatCtgtaa i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 33024 958 + 85365473 cacataatcacacaaaaggatgctcaatat---atctcattaggagactgcaaattaaaataatgctgagatatcactgcacacctagtagaactgtgggactct-taaaaaaagctcaacaataacaactggagattgaagaacaataggtacggtcattcattgctggcagaatgcatgaatgggtacagccactttgggagatagtttggcagtttttcccaaagataaacaagtcttaccttacaatccaacaaatgca-cccctaaattgtatatgtttagacagctgctttgaaaaattatgttcaaacaaaaactagcatgtaattatatacaagccactctactcataatggccaaaatttaaagtaatcagaacgttctacaatagctgaatgcataatcaatttgaagtacaaccatgcaatggaataccattcagcaacagaaaggaatgaactgtcaatccatgaaaagaaatgaacgaatcttggatgtatgttgctaagtaaagggtggcagtatgaagatgctttacattatatgactccattcatatgacattctggaaaaagcacaaccaaagacatgatcgtcagatcagtgcctct-ctggggttgggatttgaagtattccgtatggtactccagtagtggatatctgacactatgcatttgataaaacccatagaattttaatgcacaaagaacaaatcacaatctacacaaattaaattatttaggatgtggaagtatctaaggacaaaatacagactgcaaccaagaatctaactgtattaccaatgtatgttgcaagtggtgggccaaaggtgctgagc----------tggaaatgcatagaatccatagactaaaaacaaaatgtactatacaca--aacagtggactctattttataaacttatttcccatagagataatagttaattttgaaaccactatatCtgtaa i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 364784 882 - 2125214 caaataatcatacaaaagaatgctcaacatcaagtctcattagaagactgcaaatgaaaataacactgagagatcactgcacacttagtagaactgcaggactctaa-aaaaaagctcaacaataacaattagaggttgaagaacaataggtactgtcattctgtgctggtagaatgcattaat-ggtacagccactttgggagatagtttggcagtttttcccaaagataaacaagtcttatc-tactatccaacaaatgca-cccctaaattgtatatgtttagacagctgctttgaaaaattattttcaaacaaaaacta------------------------------------------------------------------------------gcataatcaacttgaagaacaaccaagcaatggaataccattcagcaacagaaaggaatgaactttcaacccatgaaaataaatgaatgaatcttg----tacattgctaagtgaaggctggcagtatgaagacactgtatattatatgactccattcatatgacattctggaaaaggcacaactacagagatgataatcagatgagtgactgtcccagggtggggatttgaagtattctctatggtactttagtggtagatacctgacactatgcatttgataaaacccatagaattttaaagcacaaa-aagaaatcacaatctaca-----caaattatttaggttgtggaagtatctaaggatgaaatatagggtgcaacaaagaatctaactgtattaccaatgtatgttgcaagtggtgggccaaaagtgctgacctaagtcattctggaaattagtcgaatctatagactaaaagcaaaatgtagtgtacaca--aaaagcggactctattttataaagttatttctcatagggttaatagttaattttgaaaccactatatctgtaA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487412v1 59704 878 + 1028614 caaataatcacacaaaaggatgctcgatagcatgtcttattaggagactgcagattaaaataacactgagataccactgtacacctggtagaactgtaagacttt-a-agaaaagttcaacaa--------ggaggttgaagaacaataggtgct-tcattcattgctggtaaaatgcattaat-ggtacagccagtttgggagatagtttggcagtttttcccaaagataaacaagtcttacc-tacaatccaacaaatgcaccccctaaattgtgtatgttcaaacagctgctttgaaaaattattttcgaacaaaaacta------------------------------------------------------------------------------gcataatcaacttgaattacaaccatgcaatggaataccattccataacagaaaggaatgaactttcaattcatgaaaatgaatgaatcttgcatg----tgtgtttctaagtgaaaggtgtcagtatgaagatgctattcatgatgtgactccattcatatgacatgctggaaaaggcacaactacagagatgataatcagatgagtgactgt-ctggggcggggatttgaagtattctgtacggtaccttagtggtggatacctgacactatgcctttgataaaacccatagaattttaaattacaaagaacaaatcacaacctacagaaattaaattatttaggttgtggaagtatctaaggacaaaatacagagggcaatcaagaatctaattggattatcaatgtatgttgcaaatggtgggccaaaggtactgacctaagtcattttggaaatgagtagaatccacagactaaaagcaaaatgtactatacaca--aacagtggactctattgtataaagttatgtcccatagggataatagttaattttgaaaccactgtaTCtgtaa i aotNan1.NW_018487412v1 C 0 C 0 e calJac3.chr8 91746829 1261 - 128169293 I e saiBol1.JH378358 67614 3872 + 223797 I a score=1029896.000000 s hg38.chr3_KI270784v1_alt 69695 942 + 184404 aaagaa-aaataaccatgattttcctctatactatcaaca-ctccacttttaacagcaaattgtggggggtggggggtgtttcccataccaaccaatattccaactctctggaaaacaattgggtatcctgtaattcaactgtgacactgattacctggagttagtatacaccctacaggttaagggcttagtaacaccagactgtccacaacctcagatgccaatcacaagtagtgaatccccagtttacccaaacttctatatgacttggctagaaactaggcattcctacaccccctcttcaggtttgacaatttgctatgatggcttatggaact--aggaaatacttacttatgtttactagttattatggtctcaatgtgtgtac----a-cccccaccccaaattcctattttgaaatgtaatccccaaagggatggtattcagaggtaaccgagaggtgatcggatcatgagagtgctgtcctcatgaatgaaaccagtgcccttataaaagcatctaggagcccgtttccccattctgccatgtcacgacat-gctagaaggcactatctatgatagatgagccctcactagacatcaaatctgtcagccttgatctggaactttccaaattccatattttaggaatttttatggaagcttcatcatgtagacatgacggattattaactcaatttccagtcccttcacaccctcaaaggattgcatgttaagctaaaagttacaaccttcttatcatggcttggtctttctggtgaccatcccc-atcctgaaaccacccaggaacccacagag----tgtccttattagaacagaagccattcctattatccaggagattccaagagatttaggaactctgcgtcaggaaccagggccaaagaccaaatattagaacacaagatgctcctagcacccctactgttc s gorGor5.CYUI01004482v1 3254 941 - 30167 aaagaa-aaataaccatgattttcctctatactatcaaca-ctccacttttaacagcaaattgtggggggtggggggtgtttcccataccaaccaatattccaactctctggaaaacaattgggtatcctgtaattcaactgtgacactgattacctggagttagtatacaccctaca-gttaagggcttagtaacaccagactgtccacaacctcagatgccaatcacaagtagtgaatccccagtttacccaaacttctatatgacttggccagaaactaggcattcctacaccccctcttcaggtttgacaatttgctatgatggcttatggaact--aggaaatacttacttatgtttactagttattatggtctcaatgtgtgtac----a-cccccaccccaaattcctattttgaaatgtaatccccaaagggatggtattcagaggtaaccgagaggtgatcggatcatgagagtgctgtcctcatgaatgaaaccagtgcccttataaaagcatctaggagcccgtttccccattctgccatgtcacgacat-gctagaaggcactatctatgatagatgagccctcactagacatcaaatctgtcagccttgatctggaactttccaaattccaTATTTTAGgaatttttatggaagcttcatcatgtagacatgacggattattaactccatttccagtcccttcacaccctcaaaggattgcatgttaagctaaaagttacaaccttcttatcatggcttggtctttctggtgaccatcccc-atcctgaaaccatccaggaacccacagag----tgtccttattagaacagaagccattcctattatccaggagattccaagagatttaggaactctgcgtcaggaaccagggccaaagaccaaatattagaacacaagatgctcctagcacccctactgttc i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 33982 943 + 85365473 aaataa-aaataaccatgattttcctctatactatcaaca-cttcacctttaacagcaaattgtggggggtggggggtgtttcccacaccaaccaattttccaaccctctggaaaacaattgggtgtcctataattcaactatgacactgattacctggagttagtatagaccctacaggttaagggcttagtaacaccagactgtccccaacctcagatgccaatgacaagtagtgaatccccagtttacccaaacttctatatgacttggctagaaactaggcattccgacaccccctcttcaggtttgataatttgctatgatggcttatggaact--aggaaatacttacttatgtttactagttattatggtctcaatgtgtatac----accccccaccccaaattcctattttgaaatgtaatccccaaagcgatggtattcagaggtaattgagaggtgatcagatcatgagggtgctgtcctcatgaatgaaaccagtgcccttataaaagcgtctaggggcccgtttccccattctgccatgtcaggacat-gctagaaggcactatctatgatagatgagccctcactagacatcaaatctgtcagccttgatctggaactttccggattccaTATTTTAGgaattcttatggaaacttcatcatgtagacatgatggattattaactcaatctccagtcccttcacaccctcaaaggactgcatgttaagttaaaagttacaagcttcgtatcatggcttggtctttctggggaccatgccc-atcctgaaaccatccaggaacccacagag----tgtccttattagaacggaagccattcctattatccaggagattccaagggatttacgaactctgtgtcaggaaccagggccaaagaccaaatattagaacacaagatgctcctagcaccccttttgttc i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91748090 933 - 128169293 aaagaacaaataaccctgattttcctctatactttcaacacttccacttctgacagcaattttgagtggggg-gagatgtttccca---caaccaattttccaatgctctggacaataattgggtgtcctataatttcattatgacattaattagctggagttcatacagaccctacaggttaagggtttaggaatatcacactgtccccgacctcaggtgccaatcaaaagtagtgaatccccagtttatgcaaacttctgtatgacttggctagaaatgaggcactcctacacccttccctcaggtttgataattttgtatgatggcctatggaactcaggaaaacacttacccatgtttattagttactatggtctcaatgtgtgtat----a-cc----ctccaaattcctatgttaaaatgtaatcctcaaagggatggtattcagaggtaatagagaggtgattggatcatgagggtgctgccctcatcaatgaaaccagcacccttataaaagaatctagaagcttttttccccattctgccatgtcagaatatggctagaaggcactatctatgagggatgagccgtctctagacatcaaatctgtcagacttgatctgggacttttcagattccatattttaggaatttttatggaagcttcatcatatagacatgattgattattaactcaatctcccgtcccttcaaaccctcaaaggattgcatgtaaagctaagagttacaagcttcttattatggcttggtccttctggtggccatcccccatcctgaaaccatccaggaacccacagag----ggtcctt------acagaagacatttctatcactcaggagattccaa-ggatttaggaactctgcttcaggaaccagggccaaagaccaaatattagaacacgagatgtttctagcacccctattgttc i calJac3.chr8 I 1261 C 0 s cebCap1.NW_016107703v1 365666 932 - 2125214 Aaagaa-aaacaaccctgattttcctctatattctcaaca-ttccacttctgacagcaaattaggatggggg-g-gatgtttcccacaccaacaaatttgccaactctttggacaacaattgggtgtcctataattcaattatgacattaattacctggagttcttacagactctacaggttaagggcttagtaacaccagactgtccccagcctcagatgccaatcaaaagtattggatccccagtttgcccaaacatctatatgacttggctagaaactaggcactcctacatcccctcctcaggtttgataatttgctataatggtttatgaaactcgggaaa-----cacttatgtttgctagttaccatggtctcaatgtttgtataccga-cc----ccccaaattcctatgttgaaacataaaccccaaaggaatggtattcagagataatttagaggtgattggatcatgcaggtgctgccctcattaatgaaaccagtgcccttttaaataaatctaggagcctttttccccattctgccatgtcagggcatggctagaaggcactatctacgaggtaggagccctcattagacatcgaatctgtcaggcttgatctggaactttgcagattccatattttaggaatttttatggaagcttcaacatgtagatgtgattgattattaactcaatctccagtcccttcacaccctcaaaggattacatgtgaagctaaaagttacatgcttcttatcatggcttggtctttctggtgaccatcccctatcctgaaaccatccaggaacccatagag----ggtcctt------acagaagacattcctatca-tcaggagattccaagggatttaggaactctgtgtcaggaaccaggaccaaagaccaaatataagaacacaagatgttcctagcacccctattgttc i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487412v1 60582 902 + 1028614 aaagaa-aaataaccctgattttcctctgtactctcaaca-cttcatttctgacagcaaattggggtgggggtgggttgtttcctacaccaaccaattttccaactctctggaaaacaattgggtgtcctataattcaattacaacattaattacctatagttcg---------tacagtttaagggcttagtaacaccagactgtccccaacctcagatgccaatcaaaagtagtgaatccccagtttacccaaacttctatatgacttggcttgaaactagtcactcctacacccactcctcaggtttgacaatttgctataatggcttacggatctcagggaaacacttacttatgtttactagttactatggtctcaatgtgtgtat----a-cc----ctccaaattcctatgttgaaacgta------aaagggatggtattcagaggtaattgagaggtgactggatcatgagggtgctgcccttat----------------------aaagaatctaggagcctttttcccc-ttttgccatgtcaggacatggctagaaggcactatctctgaaggacgagccctcactagacatcaaatctgtcagacttgatctgggactttccagattccatattttaggtattttaatagaaacttcatcatgtagacatgatcaattattaactaaatctccagtcccttcacaccctcaaaggattgcatgtgaagctaaaagttacaagcttcttatcatggcttggtctttctggtgactatccccaatcctgaaatcaaccaggaacccacagagggacggtcctt------acagaagacattcctatcactcaggagattccaaagaatttaggaactttgcatcaggaaccagggccaaagaccaaatattagaacacaagatgttcctagcacccctatttttc i aotNan1.NW_018487412v1 C 0 C 0 e saiBol1.JH378358 67614 3872 + 223797 I a score=171793.000000 s hg38.chr3_KI270784v1_alt 70637 117 + 184404 aggaaattataatagttttagaagctctgtaccaggaactgcagacacagaccaaacatatatttcttattaagtcccaaCCTGGAATCTTGATCAAGAATGAATTCCTTGTTCCCA s gorGor5.CYUI01004482v1 4195 117 - 30167 aggaaattataatagttttagaagctctgtaccaggaactgcagacacagaccaaacatatatttcttattaagtcccaaCCTGGAATCTTGATCAAGAATGAATTCCTTGTTCCCA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 34925 117 + 85365473 aggaaattataatagttttaggagctctgtaccaggaactgcagacagagaccaaacatatatttcttattaAGTCCCTACCTGGAATCTTGATCAAGAACGAATTCCTTGTTCCCa i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91749023 115 - 128169293 agtaaataataaaagttttaggagctctctattaggaactacagacagagaccaaac--atatttctcattaaattgcaaCCTGGAATATAGATCAAAAATGAATTCCTTGTTCCCA i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 71486 115 + 223797 aaaaaattataaaagttttagaagtgctgtatcaggaactgcagagagagaccaaac--atatttctcattaaatcccaaCCTGGAATATAGATCAAAAATGAATTCCTTGTTCCCA i saiBol1.JH378358 I 3872 C 0 s cebCap1.NW_016107703v1 366598 108 - 2125214 aggaaattataaaagttttaaaagtgctttatcaggaactggagacagagaccaagc--atatttctcattaaatcccaaCCTGGAATCT-------GAATGAATTATTTGCTCCCA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487412v1 61484 115 + 1028614 aggaaattataaaagtttcaggagctctgtatcaggaactggagacaaagaccaaat--atatttctcattaaatcCCCACCTGGAATGTAGATCAAGAATGAATTCCTTGTTCCCA i aotNan1.NW_018487412v1 C 0 I 34 a score=17124.000000 s hg38.chr3_KI270784v1_alt 70754 18 + 184404 GTGGTACAAGGGATGaaa s gorGor5.CYUI01004482v1 4312 18 - 30167 ATGGTACAAGGGATGaaa i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 35042 18 + 85365473 atggaacaagggatgaaa i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91749138 18 - 128169293 ATGGACCAAGGCATGaaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 71601 18 + 223797 ACGGACCACGGCATGaaa i saiBol1.JH378358 C 0 C 0 s cebCap1.NW_016107703v1 366706 18 - 2125214 ATGGGACAAGGGATAaaa i cebCap1.NW_016107703v1 C 0 C 0 e aotNan1.NW_018487412v1 61599 34 + 1028614 I a score=10690.000000 s hg38.chr3_KI270784v1_alt 70772 13 + 184404 tgaatggcagata s gorGor5.CYUI01004482v1 4330 13 - 30167 taaatggcagata i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 35060 13 + 85365473 taaatggcagata i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91749156 13 - 128169293 taaatggcaaaca i calJac3.chr8 C 0 C 0 s cebCap1.NW_016107703v1 366724 13 - 2125214 taaatggcagata i cebCap1.NW_016107703v1 C 0 C 0 e aotNan1.NW_018487412v1 61599 34 + 1028614 I e saiBol1.JH378358 71619 0 + 223797 C a score=19004.000000 s hg38.chr3_KI270784v1_alt 70785 94 + 184404 gtaggagccaggttcctcactattacagtgagaagtcacagataaaaaac-agggaagcctagagtggtctctgtcatcatgagtcagaatgtat s calJac3.chr8 91749169 95 - 128169293 gtgggagccaggttcctcactgttagagtgagaaattacagataagaaatgggggaagcctagaatgatctctgtgctaatggatccgaatatat i calJac3.chr8 C 0 I 754 s cebCap1.NW_016107703v1 366737 95 - 2125214 gtgggaaccaggttccagactgttagagtgagaagttccagataagaaatgggggaagcctggaatgatctctgtgataatgggtcagaatatat i cebCap1.NW_016107703v1 C 0 C 0 e aotNan1.NW_018487412v1 61599 34 + 1028614 I e saiBol1.JH378358 71619 0 + 223797 C e nomLeu3.chr20 35073 0 + 85365473 C e gorGor5.CYUI01004482v1 4343 0 - 30167 C a score=91.000000 s hg38.chr3_KI270784v1_alt 70879 1 + 184404 a s cebCap1.NW_016107703v1 366832 1 - 2125214 a i cebCap1.NW_016107703v1 C 0 I 2314 e aotNan1.NW_018487412v1 61599 34 + 1028614 I e calJac3.chr8 91749264 754 - 128169293 I e saiBol1.JH378358 71619 0 + 223797 C e nomLeu3.chr20 35073 0 + 85365473 C e gorGor5.CYUI01004482v1 4343 0 - 30167 C a score=0.000000 s hg38.chr3_KI270784v1_alt 70880 308 + 184404 cggcagatggtaggagccaggttcctcactattacagcgagaagttacagataaaaaacagggaagcctagagtggtctctgtcatcaggagtcagaatgtatacggcagatggtaggagccaggttcctcactattacagcgagaagttacagataaaaaacagggaagcctagagtggtctctgtcatcaggagtcagaatgtatacggcagatggtaggagccaggttcctcactattacagcgagaagttacagataaaaaacagggaagcctagagtggtctctgtCATCAGGAGTCAGaatg e aotNan1.NW_018487412v1 61599 34 + 1028614 I e cebCap1.NW_016107703v1 366833 2314 - 2125214 I e calJac3.chr8 91749264 754 - 128169293 I e saiBol1.JH378358 71619 0 + 223797 C e nomLeu3.chr20 35073 0 + 85365473 C e gorGor5.CYUI01004482v1 4343 0 - 30167 C a score=508.000000 s hg38.chr3_KI270784v1_alt 71188 13 + 184404 tatacggcagatg s saiBol1.JH378358 71619 13 + 223797 taaatggcaaaca i saiBol1.JH378358 C 0 C 0 e aotNan1.NW_018487412v1 61599 34 + 1028614 I e cebCap1.NW_016107703v1 366833 2314 - 2125214 I e calJac3.chr8 91749264 754 - 128169293 I e nomLeu3.chr20 35073 0 + 85365473 C e gorGor5.CYUI01004482v1 4343 0 - 30167 C a score=1050.000000 s hg38.chr3_KI270784v1_alt 71201 3 + 184404 gta s gorGor5.CYUI01004482v1 4343 3 - 30167 gta i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 35073 3 + 85365473 gta i nomLeu3.chr20 C 0 C 0 s saiBol1.JH378358 71632 3 + 223797 gtt i saiBol1.JH378358 C 0 C 0 e aotNan1.NW_018487412v1 61599 34 + 1028614 I e cebCap1.NW_016107703v1 366833 2314 - 2125214 I e calJac3.chr8 91749264 754 - 128169293 I a score=545593.000000 s hg38.chr3_KI270784v1_alt 71204 768 + 184404 ggagccaggttcctcactattacagtgagaagttacagataaaaaat-agggaagcctagagtggtctctgtcatcatgagtcagaatatatatataca---------acgtaagtataaactcacatttagcttaacatatacatagatggttccacatagaaacctttataattaagtgggtacatataagttagaagacacacatatatttctttgcactgtcagctgtaagtgtcatgatgcaatgaccacatttagtggccagatgtaagtttttcataccattctctaacaaaagaaatcagggctattag-aagaaatagctgaaactaggactgggacagaa-aatatatgagccagggtacttttgaagtaacagaaataaattataaaaaaa----------aa-acatgaaattatgtaaaagaagccagtggaaagagctaccaatggccaca-ggtatgaacaaagagcaacaaaatactgtacaattagataacaaccaaaagattaaagtaactatctgtggacccatactggtataaataaatgattaaacagatatgcaaatgggctgaatagaaatctcttatacagaagaattccaaatacctgatacaga----cagccatcaaggaggtggggctaactccccactcctttaagtatgagctctgcatgatgacttcctccaaaagcatacatacaatatagacatgggaaaaaagtaacttcacagtgaaaaacctgaaaacactgcctcaaccaagtgataaaagttaacatt s gorGor5.CYUI01004482v1 4346 766 - 30167 ggagccaggttcctcactattacagtgagaagttacagataaaaaat-agggaagcctagaatgatctctgtcataatgagtcagaatatatatataca---------acataagtataaactcacatttagcttaacatatacatagatggttccacatagaaacctttataattaagtgggtacatataagttagaagacacacatatatttctttgcactgtcagctgtaagtgtcatgatgcaatgaccacatttagtggccagatgtaagtttt-cataccattctctaacaaaagaaatcagggctattag-aagaaatagctgaaactaggactgggacagaa-aatatatgagccagggtacttttgaagtaacagaaataaattataaaaaaa----------aa-ccatgaaattatgtaaaaggagccagtggaaagagctaccaatggccaca-ggtatgaacaaagagcaacaaaatactgtacaattagataaca-ccaaaagattaaagtaactatctgtggacccatactggtataaataaatgattaaacagatatgcaaatgggctgaatagaaatctcttatacagaagaattccaaatacctgatataga----cagccatcaaggaggtggggctaactccccactcctttaagtatgagctctgcatgatgacttcctccaaaagcatacatacaatatagacatgggaaaaaagtaacttcacagtgaaaaacctgaaaacactgcctcaaccaagtgataaaagttaacatt i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 35076 779 + 85365473 ggggccaggttcctcactcttagagtgagaagttacagataagaaat-ggggaagcctagaatgatctctgtgacaatgagtcactatatatatacatatatatatatatatatgtataaactcacatttagcttaatatatacacagatggtcccacatagaaacctttataattaagtgggtacatataagttagaagacgcacatatatttctttgcactgtcagctgtgagggtcatgatgcaatgagcacatttagtggccagatgtaagtttttcataccattctctaacaaaggaaatcaggggtctttg-aagaaatggctgaaactaggactgggacagaa-aatatacgagccagggtacttttgaagtaacagaaggaaactataaaaaaa----------aatacatgaaattatgtcaaaggagccagtggaaagaactcccaatggccaca-ggtataaacagacagcaacaaaacactgtagaattagataacaaccaaaacattaaagtgactatctgagtatccatactgctataaataaatgattaaatagatatgcaaatgggctgaatagaaatctcttatacagaagaattccaaatacctgatagacac--tcagccatcaaggaggtggggctaacttcccactcc-ttaagtatgggctctgcatgatgacttcctccaaaagcgtacatacaatatagacatgggaaaaaaggaacttcacagtgaaaaacctgagaacactgcctcagccaggtgataaaagttaacatt i nomLeu3.chr20 C 0 C 0 s saiBol1.JH378358 71635 743 + 223797 ggagccaggttcctcactgttagagtgagaagttacagataaaaaatgggggaaacctagaatgatctctgtgct-atggatctgaatatatat------------------aagtataaactcacatttagcttaatatatacacagatagttccacatagaaaactataaaattaagtggatac--ataatttagaatacacacatatatttctttgcactgtcagctgtgagggacatgatgcaataatcacatttagtggccagatgtaagtttttaa-aacattctctaacagaggaaatcagggctctttg-aaaaaatggctgaaactaggactgggacagaacaatacatgagccagtatacttttgaaataac--aaagaaattgtaaataaa--------taaataaatgaaattatgtcaaaggaaccagtggaaagcgctctcaatggccacagggtatgaacaaagagcaacaaaatattgtagaattcaacaacaaccaaaagattaaagtaa----ctgagtgtccatattggtataaacaaacgattaaatagatacac-catgggctgaatagaaattttttatacagaagaattttaaataactgatacagacattcagctatcaaggacatgtggctaaccccccactcc-ttaggtgtgggctctgcgtgttgacttcctcc--------------aatatagacatggaaaaaaagtaacttcacagcaagaaatctgaaaacattatctcaaccaggtgatcaaagctgacatt i saiBol1.JH378358 C 0 C 0 s aotNan1.NW_018487412v1 61633 778 + 1028614 ggagccaagttcctcactgttagagtgagaagttacagataagaaatgagggaagcctggaataatctctgtgataatggatcagaatatatata----------------gaagcataaactcacatttagcttaatacatacataaatggttccacgtagaaacatttataattaagtgggtacatataagttagaatatatacatatatttccttgccctttcagctgtgtgggtcatgatgcaatgtccgcatttagtggccagatgtaagtttttaataccattctttaacgaaagaaatcagggctctttgaaaaaaatggctgaaactaggactgggacagaa-aatacataagccaggatacttttgaagtaacagaaagagactgtaaataaatacatacgtacatacatgaaattatgtcaaaggacccaatggaaagagctcccaatggcgacagggtatgaacaaagagcaacaaaacagtgtagaattggataacaaccaaaacattaaagtaactatctgagtgtccataatggtataaataaatgattaaatagatacataaatgggctgaatagaaatctcttatacagaagaattccaaatacctgatatagacactcagccatcaaggaggtggggctgactccccactcc-tcaagtgtgggctctgcatggtgacctcctccaaaagcatacataaaatgtagacatggggaaaaagtaacttcacagtgagaaacctgaaaacactacctcagccaggtgatcgaagttaacaat i aotNan1.NW_018487412v1 I 34 C 0 e cebCap1.NW_016107703v1 366833 2314 - 2125214 I e calJac3.chr8 91749264 754 - 128169293 I a score=41330.000000 s hg38.chr3_KI270784v1_alt 71972 32 + 184404 aatggtgataacacatcttgagagcgtgAAGT s gorGor5.CYUI01004482v1 5112 32 - 30167 aatggtgataacacatcttgagagcatgAAGT i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 35855 32 + 85365473 aatggtgataacacatcctgagagcatgaagt i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91750018 32 - 128169293 aaTGGTGATAACACATCTTGAGAGCATGAATT i calJac3.chr8 I 754 C 0 s saiBol1.JH378358 72378 32 + 223797 aatggtgataatacatcttgagagcatgAAGT i saiBol1.JH378358 C 0 C 0 s aotNan1.NW_018487412v1 62411 32 + 1028614 aatggtgataccacatcttgagagcatgAAGT i aotNan1.NW_018487412v1 C 0 C 0 e cebCap1.NW_016107703v1 366833 2314 - 2125214 I a score=544769.000000 s hg38.chr3_KI270784v1_alt 72004 331 + 184404 GACTAGACTAGCACTtgcaaaccaaaaataaaattcaaagatctttcccccaacca----------------cctctccaccaggggacaccaaagttaacctggaagactggttcaggctatgatgggaaagaggtggtcagacacgcctcattatgccctcctcccttttggaattcaggaaaagccaatcagcatttaacatcaacac-aaccttaaatctgataagaaacatttacaatctattctctctgaagcctgctacctggaagcttcatttccatgataaaaccttggtctccataaccccttaacataacccagacactcctttctattgatagtaa s panTro5.chrUn_NW_015975002v1 116 331 + 14113 GACTAGACTAGCACTtgcaaaccaaaaataaaattcaaagatctttcccacaacca----------------cctctccaccaggggacaccaaagttaacctggaagactggttcaggctatgatgggaaagaggtggtcagacatgcctcagtatgccctcctcccttttggaattcaggaaaagccaatcagcatttaacatcaacac-gaccttaaatctgataagaaacatttacaatctattctctctgaagcctgctacctggaagcttcatctccatgataaaaccttggtctccataaccccttatcataacccagacactcctttctattgatagtaa i panTro5.chrUn_NW_015975002v1 N 0 C 0 s gorGor5.CYUI01004482v1 5144 331 - 30167 GACTAGACTAGCACTtgcaaaccaaaaataaaattcaaagatctttcccacaacca----------------cctctccaccaggggacaccaaagttaacctggaagactggttcaggctatgatgggaaagaggtggtcagacatgcctcatgatgccctcctcccttttggaattcaggaaaagccaatcagcatttaacatcaacac-aacctaaaatctgataagaaacatttacaatctattctctctgaagcctgctacctggaagcttcatctccatgacaaaaccttggtctccataaccccttatcatagcccagacactcctttctattgatagtaa i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 35887 330 + 85365473 gactagaatagcacttgcaaaccaaaaatacaattcaaaggtccttcccacaacca----------------tctctccaccaggggacaccaacgttaacctggaagactggttcaggctatgaagggaaagaggtggtcagagatgcctcattatgccctcctcccttttggaattcaggaaaagccaatcagcatttaacatcaacag-gaccttaaatctgataagaaacatttacaatctattctctctaaagcctgctacctggaagcttcatctccacgataaaaccttggtctccat-accccttatcataacccagacacacctttctattgataataa i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91750050 348 - 128169293 AACTAGAATAGCACTtgaaaatcaaaaataaaattcaaaggcccttcccccaaccatctgtataaactccctcctcttcaccagaggacaccaaagttaacctggaagtctggtttaggccatgacgggaaagaggtggtcagacctgcctcattatgccctcctcccttttggaattcaggaaaagatgattagcatttaacatcaacacagaccttaaatctggtaagtaatatttataatctattctctctgaagcctgctaccttgaggcttcatctgcctgataaaattttggtctccataaccccttatcataacccagacactcctttccattgataataa i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 72410 348 + 223797 AACTAGAATGGCACTtgcaaatcaaaaataaaattcaaaggcccttcccccaaccatctgtataggctccctcctcttcactaggggacaccaaagttaacctggaagactggtttaggccatgatgggaaagaggtggtcagacctgcctcattatgccctcctcccttttggaattcaggaaaagccaattcgcatttaacatcaacacagaccataaatctggtaagtaatatttataatctattctctctgaagcctgctaccttgaggcttcatctgcatgataaaatgttgctctccataaccgcttatcataacccagacactcctttccattgataataa i saiBol1.JH378358 C 0 C 0 s aotNan1.NW_018487412v1 62443 347 + 1028614 GACTAGAACAGCACCtgcaaaccaaaaataaaattcaaaggctcctccccaaatcatccgtatagactccctcctctccaccaggggacaccaaagttaacctggaagataggttcaggctttgatgggaaaggggtggtcagacttgcctcattatgccctcctcccttttggaattcaggaaaagccaatcagcatttagtttcttatcagacctaaaatctaatgagaaacatttacaatctattctctctgaaa-ctgctacctggagacttcatctgcatgataaaaccctggtctccataacccattatcatgacccagacactcctttctattgataataa i aotNan1.NW_018487412v1 C 0 I 17 e cebCap1.NW_016107703v1 366833 2314 - 2125214 I a score=12216.000000 s hg38.chr3_KI270784v1_alt 72335 13 + 184404 gtctttcaacaaa s panTro5.chrUn_NW_015975002v1 447 13 + 14113 gtctttcaacaaa i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 5475 13 - 30167 gtctttcaacaaa i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 36217 13 + 85365473 ctctttcaacaaa i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91750398 13 - 128169293 ttctttcaattaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 72758 13 + 223797 ttatttcaattaa i saiBol1.JH378358 C 0 C 0 e aotNan1.NW_018487412v1 62790 17 + 1028614 I e cebCap1.NW_016107703v1 366833 2314 - 2125214 I a score=1101918.000000 s hg38.chr3_KI270784v1_alt 72348 721 + 184404 ctgccaatcagaaaaattttaaatgtacctataacctggaagccccccccccaccctaatccattgggttgtcccaccttcctggaccgaaccaatatatatcttaaatacacttgattgatgtctcctatctccctaaaatgtatagaaccaacctgcaccccaacgaccttgggcacatgttctcagggtctcctgagggctgtgtcaagggccatggtcactcatatttggctcagaatacatctcttaaaatattttacagtc-tttgactctttttgtggacacactacacatctgctctgcttcccccaaacccctaaacccaggctgattatgagaaaaa-ccccaagtaaaccacaatggagg-acattctacacaatacctgaccgatcctcctaacactgttccaggtcctcagaagtaaagtctgagagattgtcacagccaagaagagcctgacatgatgactaaatgtcctatgggatcctagataggatcctgggagagaaaaaggcagaactaagggaaaccaaataagatgtgagcttatttaataatatagtaatatccagtcattaagtatgacaagaaatgatgtaagatgttggtcaggagtggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggcggatcacctgagatcaggagttcaagaccagcctggccaacgtggtgaaacctca s panTro5.chrUn_NW_015975002v1 460 720 + 14113 ctgccaatcagaaaaattttaaatgtacctataacctggaagccccacccc-accctaatcctttgggttgtcccacctttctggaccgaaccaatatatatcttaaatacacttgattgatgtctcctatctccctaaaatgtatagaaccaacctgcaccccaacgaccttgggcacatgttctcagggtctcctgagggctgtgtcatgggccatggtcactcatatttggctcagaatacatctcttcaaatattttacagtc-tttgactctttttgCGGACAcactacacatctgctctgcttcccccaaacccctaaacccaggctgattatgagaaaaa-ccccaagtaaaccacaatggagg-acattctacacaatacctgaccaatcctcctaacactgttccaggtcctcagaagtaaagtctgagagactgccacagccaagaagagcctgacatgatgactaaatgtcctatgggatcctagataggatcctgggagagaaaaaggcagaactaagggaaaccaaataagatgtgagcttatttaataatatagtaatatccagtcattaactatgacaagaaatgatataagatgttggtcaggagtggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctaagatcaggagttcaagaccagcctggccaacgtggtgaaacctca i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 5488 720 - 30167 ctgccaatcagaaaaattttaaatgtacctataacctggaagccccacccc-accctaatccattgggttgtcccacctttctggaccgaaccaatatatatcttaaatacacttgattgatgtctcctatctccctaaaatgtatagaaccaacctgcaccccaacgaccttgagcacatgttctcagggtctcctgagggctgtgtcaagggccatggtcactcatatttggctcagaatacatctcttcaaatattttacagtc-tttgactctttttgtggacacactacacatctgctctgcttcccgcaaacccctaaacccaggctgattatgagaaaaa-ccccaagtaaaccacaatggagg-acattctacacaatacctgaccaatcctcctaacactgttccaggtcctcagaagtaaagtctgagagactgtcacagccaagaagagcctgacatgatgactaaatgtcctatgggatcctagataggatcctgggagagaaaaaggcagaactaagggaaaccaaataagatgtgagcttatttaataatatagtaatacccagtcattaagtatgacaagaaatgatgtaagatgttggtcaggagtggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctgagatcaggagttcaagaccagcctggccaacgtggtgaaacctca i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 36230 720 + 85365473 ctgccaatcagaagaattttaaatgtacctataacctggaagccctacccc-accctaatccattgggttgtcccacctttctggaccgaaccaatatatatcttaaatacacttgattgatgtctcctgtctccctaaaatgtatagaaccaacctgcaccccaaacaccttggacacatgttctcagggtctcctgagggctgtgtcatgggccatggtcactcatatttggctcagaatacatctcttcaaatattttacagac-tttgactctttttgCGGACAcactacacatctgatctgcttcccccaaaccactaaacccagtctgattatgagaaaaa-ccccaagtaaaccacaatggaga-acattctacacaatacctgaccaatcctcctaacactgctccacatcctcagaagtaaagtctgagagactgtcacagccaagaagagcctcaaatgatgactaaatgtcgtatgggatcctagataggatcctgggagagaaaaaggaagaactaagggaaaccaagtaagatgtgagcttatttaataatatagtaacatccagtcattaactatgacaacaaatgatataagatgttggtcaggagtggtggctcatgcctgtaatcccagcactttgggaggctaaggcgggcagatcacctgagatcaggagttcaagaccagcctggccaacatggtgaaacctca i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91750411 681 - 128169293 tttccaatcagaaaatgtttcaaattacctataacctaaaagttccacttc-accctaacccactgggttgtcccacctttctggaccaaaccaatatatagcttaaatacatttgattgatgtcttctatctccctaatatgtatagaaccaagttgtatcc-----------------------cagggtctcctgagggctgtgtcataggacatggtcactcatatttggctcagattacatctcttcaaatgttttacagacttttaactctttttgtggacacactacacatctgatctacttccccaaaacccataaccccagtctaactatgagaaaaa-catcaagtaaaccaaaatggagg--------acacaatacctaaccaatcctcctaacactgtttcagggcctcagaagaaaagtctgagagactctcacagcaaggaatagccagacatgacaact-aatgttctcttggatcccagctagaatcctgggacaaaaaaaggcagaactaagagaaaccaaataaaatgtgagcttatttaataatatgttaatatccagtcattaactgtgaa---aaactatgtaagatgttggc------cagttgctcatgcctgcaatcccagcactttgggaggccgaggcaggcaaattacctgaggtcaggagttggagaccaacctgcccaacatgatgaaacctca i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 72771 691 + 223797 ttgccaatcagaaaatgtttca----acctataacctaaaagccccacttc-accctaacccactgggttgtcccacctttctggaccaaaccaatatatagcttaaatacatttgattgatgttttctatctccctaataggtatagaaccaagttgcatcc-----------------------cagggtctccagagggctgtgtcataggacatggtcactaatatttggctcagaatacatctcttcaaatattttacagac-tttaactctttttgtggacaCACTACACATCtgatctgcttcccccaaacccataaccccagtctaactgtgagaaaaa-catcaagtaaaccaaaatggaggaccaatctacacaataccttaccaatcctcctaacattgtttcagggcctcagaagaaaagtctgagagactctcacagcaaagaagagcctgacatgataactaaatgttctctgggatcctagctagaatcctggaacaggaagaggcagaactaagagaaaccaaataaaatgtgagcttatttaataatatgttaatatccagtcattaactgtgaa---aaatgatgtaagacgttggccgggtgcagtggctcatgcctgcaatcccagtactttggaaggccgaggcaggcaaatcacctggggtcagaagttaaagaccaacctgcccaacatggtgaaacctca i saiBol1.JH378358 C 0 C 0 s aotNan1.NW_018487412v1 62807 676 + 1028614 ctgccaataataaaatgtttaaatctacctataacctg-----------------------cac------------cctttccagactgaactgatatacatcttaaacacatctgattgatgtctcctatctccctgaaatgtacagaaccaagctgcacccaaaccaccttgagcacatgttctcagggtctcctgagggctgtgtcacaggccacggtcactcatatttggctcagaatacatctcttcaaatatttcacagac-tttgactctttttgtggacaCACTACATATCtgatctgcttcccccaaacccataaccacagtctaattatgaaaaaaatcaccaagtaaaccacaatggagg-acattctacacaatacctcaccaatcctcctaacactgttccaggtcctcagaaggaaagtctgtgagactgtcacagccaagaagagcctgacatggtgactaaatgtcctgtgggatcccagacaggatcctgggacagaaaaaggcagaactaggagaaaccaaataaaatgtgagcct--------atatagtaatatccggtcatcaactgtgac---aaatgatgtgagatgttggccaggcatggtgggtcatgcctgtaatcccagcattttgggaggcagaggcgggaggatcacctgaggtcaggggttccagaccaacctggccaacatggtgaaacccta i aotNan1.NW_018487412v1 I 17 C 0 e cebCap1.NW_016107703v1 366833 2314 - 2125214 I a score=862617.000000 s hg38.chr3_KI270784v1_alt 73069 483 + 184404 tctctactaaaaatacaaaaattagccgggcatgatggcaggcgcctgtaataccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcagtgagccgagatcacgccactgcactccagcctggtt--------gagactctgtctgaaaaaaaaaaaaaaaaaaaaaaaagatgtta--aacctatctgatacatgttggtatgttaaaaagcggggaaactaggttgcgtctacatgggaaatctgcattttcttcccaatttctgtatgaatctaaaactaatttaaaataaaacctctatttaaaaaTTGTAA-TTTTTTCAGATATCTGCTAAATTATTTGTACTAAAAAT---TAGTAATTGACAGTAACTACTACTACTTTTAAAAATAAGAGCATTCATGATACTGCAAAGTAAATTATACAGAC-------TAATATATACTTTCAAAGAAATGCCCCTTTTACATGTTTTA s panTro5.chrUn_NW_015975002v1 1180 476 + 14113 tctctactaaaaatacaaaaattagccgggcgtgatggcaggcgcctgtaataccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggcggaggttgcagtgagccgagatcatgccactgcactccagcctggtt--------gagactctgtctggaaaaaaaaaaaaaaaa-------gatgtta--aacctatctgatacatgttgatatgttaaaaagaggggaaactaggttgcgtctacatgggaaatctgcattttcttcccaatttctgtatgaatctaaaactaatttaaaataaaacctctatttaaaaaTTGTAA-TTTTTTCAGATATCTGCTAAATTATTTCTACTAAAAAT---TAGTAATTGGCAGTAACTACTCCTACTTTTAAAAATAAGAGCATTCATGATACTGCAAAGTAAATTATACAGAC-------TAATACATACTTTCAAAGAAATGCCCCTTTTACATGTTTTA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 6208 482 - 30167 tctctactaaaaatacaaaaattagccgggcatgatggcaggcgcctgtaataccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcagtgagccgagatcacgccactgcactccagcctggtt--------gagactctgtctggaaaaaaaaaaaaaaaa-aaaaaagatgtta--aacctatctgatacatgttgatatgttaaaaagaggggaaactaggttgcatctacatgggaaatctgcattttcttcccaatttctgtatgaatctaaaactaatttaaaataaaacctctatttaaaaaTTGTAA-TTTTTTCAGATATCTGCTAAATTATTTGTACTAAAAAT---TAGTAATTGACAGTAACTACTCCTACTTTTAAAAATAAGAGCATTCATGATACTGCAAAGTAAATTATACAGAC-------TAATATATACTTTCAAAGAAATGCCCCTTTTACATGTTTTA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 36950 473 + 85365473 tctctactaaaaatacaaaaattagacgggcgtgatggcaggcgtctgcaataccagctactcaggaggctgaggcaggagaatcgctggaacctgggaggcggaggttgccgtgagccgagatcgcaccactgcactccagcctgggt--------gagactctgtctgaaaaaaaaaaaa------------gatgtta--aacatatctgatacatattgatatgttaaaaagaggggaaactaggttgcgtctacatgggaaatctgcattttcttcccaatttctgtgtgaatctataactaatttaaaataaaacctttatttaaaaaTTGTAA-TTTTTTCAGATTTCTGCT-AATTATTTGTACTAAAAATTAGTAGTAATTGACACTAACTACTGCTACTTTTAAAAATAAGAGCATTCAAGATACTGCAAAGTAAATTATGCAGAC-------TAATACATAATTTCAAAGAAATGCCCCTTTAACATGTTTTA i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91751092 458 - 128169293 tctctactaaaaatacaaaaattagccaggcatgatggcaggtgcctgtaatcctagcctctcaggaggctggggcaggagaatcacttgaacatggaagg-ggaggatgcagtgagctgagatcatgccactgtactacagcctgggtgacagagggagactcagtctcaaaaaaaaa------------------gttaataacataactgatacatgttcatatgttaataagaagggaaacc-ggttggaaatacatgggaaatctgcattatcttcccaattttagtgtgaatccaaaactaacttaaaataaaatctttattaaaaacttgta--ttttttaaaGTATCTGCT----TATTTGTACTATT-AG---TAGAAATTGACACTAACTACTCCGACTTTTTAAAGTAAGAGCATTCATGCT--------ATAAATTATGCAGAC-------TAATACATAATTTCAAAGAAATGCCTC-TTTACATGCTTTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 73462 461 + 223797 tctccactaaaaatacaaaaattagccgagcatgatggcaggtgcctgtaatcctagcctctcagaaggctggggcaggagaatcacttgaacctggaaggaggaggatgcagtgagccaagatcatgccactgtactacagcctaggtgacagagcgagactcagtctc-aaaaaaaa------------------gttaataacataactgatacatattcatacgttaataagaagagaaactaggttgggcatacatgggaaatctgcattatcctcccaattttagtgtgaatccaaaactaact-----taaaatctttattaaaaaattgta--ttcttaaaaaTATTTGCT----TATTTGTACTATT-AG---TAGAAATTGACACTAACTACTCCTACTTTTTAAAGTAAGAGCATTCATGCT--------ATAAATTATGCAGACTAATATATAATATATAATTTCAAAGAAATGCCTC-TTTAAATGGTTTA i saiBol1.JH378358 C 0 C 0 s cebCap1.NW_016107703v1 369147 476 - 2125214 tctctcctaaaaatacaaaaattagctaggcattatggcaggcacctgtaatctcagctacttgggagactgaggcaggagagttgcttgaagctgggaggcagaggctgcagtgagctgagatcacaccaatgcactccagcctgggc----aagcaagactccatctcaaaaaaaaaaa-------------GATATTAATAACATATCTGATACATGTTGATatgttaataaaaggggaaactaggttgagtctacacaggaaatctgcattttcttcccaatttctgtgtgaatctaacagtaatttaaaataaaacatttattaaaaaaCTATAATTTTTTTCAAATATTGGCTTAACTATTTGTACTAAT-AG---TAACAATTTACACTAACTACTCCTACTTTTTAAAATAAGGGCATTCATGATGCTGCAAAGTAAATTATGAAAAC-------TAGTATATAATTTCAAGGAAATGCCTCTTTTACCTGTTTTA i cebCap1.NW_016107703v1 I 2314 I 436 s aotNan1.NW_018487412v1 63483 468 + 1028614 tctctactaaaaatacaaaaattagccaggcgagatggcaggcacctgtaatcccagctactcgggaggctgaggcaggagagtcacttgaacccagaaggcagaggttgcaatgacctgagatcacaccactgcactacaacctgggc----gagcgagactccatctgaaaaaaaaaaa-------------gatgttaacaacatatctgatacatgttgatatattaataagaggtaaaacttcgttgggtctacataggaaatctgcattttcttcccaatttctgcgtgaatctaaaactaatttaaaataaaacctttattaaaaaaTAA----TTTTTCCAAATATCTTCTTAATTATTTGTACTAGTAAG---TAGTAACAGATACTAACTACTCTTATTTTTTAAAATAAGAGCATTCATGATGCTGCAAAGTAAATTATACAAAG-------TA----ATAATTTCAA-GAAATGCCTCTTTTACATGTTTTT i aotNan1.NW_018487412v1 C 0 C 0 a score=425643.000000 s hg38.chr3_KI270784v1_alt 73552 301 + 184404 TGTTAAGATAACATATATGTGTAAACATGGTCA---TATCATTTTCCTTATGGTGTAGTTCACTCTCTAAGAAAGCTGGTCATCTTAGAACCAGGGAAAAAAATTCACATTTTGGAGACTATTTCAATTTACGGCTGGACGTTTTC-AAAGTATGACTTTG------CG---AAAAAAAAAAAAG----TT-------CAAATTGATTCATTGTGACTGGATCACTTATTCTAATGAA-TGCTTGCCTTTATTTTGTTTCCCAGCATTCCTTTCAGCTACGATACAACAGAAGCAAATATTTGCCACT-GGAAAAAATATTCAAAga s panTro5.chrUn_NW_015975002v1 1656 302 + 14113 TGTTAAGATAACATATATGTGTAAACATGGTCG---TATCATTTTTCTTATGGTGTAGTTCACTCTCTAAGAAAGCTGGTCATCTTAGAACCAGGGAAAAAAATTCACATTTTGGAGACTATTTCAATTTACGGCTGGATGTTTTC-AAAGTATGACTTTG------TG--AAAAAAAAAAAAAG----TT-------CAAATTGATTCCTTGTGACTGGATCACTTATTCTAATGAA-TGCTTGCCTTTATTTTGTTTCCCAGCATTTCTTTCAGCTACGATACAACAGAAGCAAATATTTGCCACT-GGAAAAAATATTCAAAga i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 6690 302 - 30167 TGTTATGATAACATATATGTGTAAACATGGTCA---TATCATTTTTCTTATGGTGTAGTTCACTCTCTAAGAAAGCTGGTCATCTTAGAACCAGGGAAAAAAATTCACATTTTGGAGACTATTTCAATTTACGGCTGGACGTTTTC-AAAGTATGACTTTG------TG--GAAAAAAAAAAAAG----TT-------CAAATTGATTCATTGTGACTGGATCACTTATTCTAATGAA-TGCTTGTCTTTATTTTGTTTCCCAGCATTCCTTTCAGCTATGATACAACAGAAGCAAATATTTGCCACT-GGAAAAAATATTCAAAga i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 37423 298 + 85365473 TGTTAAGATAACACATACGTGTAAACATATTCA---TATCATTTTTCTTATGGTGTAGTTCACTCTCTAAGAAAGCTGGTCATCTTAGAACCAGGG-AAAAAATTCACATTTTGGAGACTATTTCAATTTACGGCTGGACGTTTTC-AAAGTATGACTTCG------TGAAAAAAAAAAAAAAAG----TT-------CAAATTGATTCATTGTGACTGGATCACTTATTCTAATGAA-TGCTTGTC-----TTTGTTTCCCAGCATTCCTTTCAGCCACGATACAACAGAAGCAAATATTTGCCACT-GGAAAAAATATTCAAAga i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91751550 310 - 128169293 TGTTAAAATAATACATATGTGTAAACATGTTTATTATATCTTTTCCTTTGTGGTATGGTTCACTCTCTAAGAAAGCTGGTCACCTTAGAACCAGGG-AAAATATTTACATTTTGGACACTATTTCAATTGATCGGTGAACATTTTCAAAAGGATGACTTTG------CA--GAAAAAAAAAAAAACCA-TTCAAATAGCAAATTGATTAATTGTGACTGGATCACTTATTCTAATGAATTACTTGTC-------TGTTTCTCAGCATTCCTTTTAGCTACAATACAACAGAAGCAAATATTTGCCACTGGAAAAAAATATTCAGAGA i calJac3.chr8 C 0 I 748 s saiBol1.JH378358 73923 319 + 223797 TGTTAAAATAATACACATGTGTAAACATGTTTATTGTATCTTTAATTTTGTGGTGTGGTTCACTCTTTAAGAAAGCTGGTCACCTTAGAACCAGGA-AAAAAATTTACATTTTGGACACTATTTCAATTTACCAGTGAACATTTTCAAAAGGATGACTTTGTGCAGTTG--GCGGAGGGGGGGGACCAGTTCAAACAGCAAATTGATTCATTGTGACTGGATCACTTATTCTAATGAATTGCTTGTC-----TTTGTTTCCCAGCATTCCTTTTAGCTATAATACAACAGAAGCAAATATTTGCCGCTGGAAAAAAATATTCAGAGA i saiBol1.JH378358 C 0 C 0 s aotNan1.NW_018487412v1 63951 295 + 1028614 TGTTAAAATAACACATACATGTAAACATACTTA---TATCTTTTTTCTCATAGCGTGGTTCACTTTCTAGGAAGGCTGGTCACCTTCAAACCAGGA-AAAA-ATTCACATTTTGGAGACTCTTTCAATTTACAGCTGGACATTTTCAAAACTACAACTTTG------TA--AAAAAAGAG---------TTCACATAGCAA--------ATTGTGACTGGATCACTTATTCTAATGAA-TGCTTGTCTTTATTTTGTCTCCTATCATTCCTTTTAGCTACAATACAACAGAAGCAAATATTTGCAACT-GAAAAAAATATTCAAAGA i aotNan1.NW_018487412v1 C 0 C 0 e cebCap1.NW_016107703v1 369623 436 - 2125214 I a score=2865.000000 s hg38.chr3_KI270784v1_alt 73853 2 + 184404 ca s panTro5.chrUn_NW_015975002v1 1958 2 + 14113 ca i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 6992 2 - 30167 ca i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 37721 2 + 85365473 ca i nomLeu3.chr20 C 0 C 0 s saiBol1.JH378358 74242 2 + 223797 CA i saiBol1.JH378358 C 0 I 768 s aotNan1.NW_018487412v1 64246 2 + 1028614 CA i aotNan1.NW_018487412v1 C 0 I 667 e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91751860 748 - 128169293 I a score=1071.000000 s hg38.chr3_KI270784v1_alt 73855 3 + 184404 ctc s panTro5.chrUn_NW_015975002v1 1960 3 + 14113 ctc i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 6994 3 - 30167 ctc i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 37723 3 + 85365473 ctg i nomLeu3.chr20 C 0 C 0 e aotNan1.NW_018487412v1 64248 667 + 1028614 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91751860 748 - 128169293 I e saiBol1.JH378358 74244 768 + 223797 I a score=285699.000000 s hg38.chr3_KI270784v1_alt 73858 239 + 184404 ttaggttaatctatagctgatgacagtcagtctagtctacatagcaagcagcttcaagatatgattacttagctaagc-gggaaatgggacgtgactgctgcctcattcccacgcctctctggacctgataatttagaggaagctcacattcgcaagataaaaattttcttttccttctcaGTATTAAATATGCTGTCACAATAGAAGAAAGCTTTACTGACTTCTTAAATGACGTGTTG s panTro5.chrUn_NW_015975002v1 1963 239 + 14113 ttaggttaatctatagctgatgacagtcagtctagtctacatagcaagcagcttcaagatatgattatttagctaagc-gggaaatgggacgtgactgctgcctcattcccacgcctctctggacctgataatttagaggaagctcacatttgcaagataaaaattttcttttccttctcaGTATTAAATATGCTGTCACAATAGAAGAAAGCTTTACTGACTTCTtaaatgatgtgttg i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 6997 239 - 30167 ttaggttaatctatagctgatgacagtcagtctagtctatatagcaagcagcttcaagatatgattacttagctaaga-gggaaatgggacgtgactgctgcctcattcccacgcctctctggacctgataatttagaggaagctcacattcgcaagataaaaattttcttttctttctcaGTATTAAATATGCTGTCACAATAGAAGAAAGCTTTACTGACTTCTtaaatgatgtgttg i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 37726 240 + 85365473 ttaggttaatctacagctgatgacagtcagtctagtctacatagcaagcagcttcaagatatgattacttagctaagcggggaaatgggacgtgactgctgcctcattcccacgcctctctggacctgataatttagaggaagctcacattcgcaaaataaaaagtttctttgctttctcaGTATTAAATATGCTGTCACAATAGAAGAAAGCTTTACTGACTTCTtaaatgatgtgttg i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91752608 240 - 128169293 ttaggttaatttatagctgatgtcagtcagtctagtctacatagcaagcagcttcgagagatgactacacagctaagaggggaaattggatgtgactgctgcctcattcccatgcctctctggacctgataatttaaagaaagctcacgttcatcagataaaacatttactttcttTCTCCATATTGAATATGTTGTCACAATAAAAGAAAGCTTTATTGATTTCTGAaatgatatgttg i calJac3.chr8 I 748 C 0 s saiBol1.JH378358 75012 240 + 223797 ttaggttaatttatagctgatgtcagtcagtctagcctacaaagcgagcagctttgagagatgactacgcagctaagaggggaagttggatgtgactgctgcctccttcccatgcctctctggacctgataatttagagaaagctcacgttcatcacataaaacatttattttctttctcaATATTGAATATGTTGTCGCAATAAAAGAAAGCTTTATTGATTTCTGAaatgatatgttg i saiBol1.JH378358 I 768 C 0 e aotNan1.NW_018487412v1 64248 667 + 1028614 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I a score=26855.000000 s hg38.chr3_KI270784v1_alt 74097 36 + 184404 AGACCGGAACCCTAAAATGATAGTTACTGAGGATAG s panTro5.chrUn_NW_015975002v1 2202 36 + 14113 agaccggaaacctaaaatgatagttactgagaatag i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 37966 36 + 85365473 agaccggaaacctaaaatgatagttactgagaatag i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91752848 36 - 128169293 agaccggaaacccaaagtaatagtgatttagagtag i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 75252 36 + 223797 agaccggaaacccaaaataatagtgacttagagtag i saiBol1.JH378358 C 0 C 0 e aotNan1.NW_018487412v1 64248 667 + 1028614 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I e gorGor5.CYUI01004482v1 7236 0 - 30167 C a score=8089.000000 s hg38.chr3_KI270784v1_alt 74133 15 + 184404 TGCTAATGCCCTAAG s nomLeu3.chr20 38002 15 + 85365473 tgctaatgccctaag i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91752884 15 - 128169293 tgctgatgccctaag i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 75288 15 + 223797 tgctgatgccctaag i saiBol1.JH378358 C 0 C 0 e aotNan1.NW_018487412v1 64248 667 + 1028614 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I e gorGor5.CYUI01004482v1 7236 0 - 30167 C e panTro5.chrUn_NW_015975002v1 2238 0 + 14113 C a score=0.000000 s hg38.chr3_KI270784v1_alt 74148 96 + 184404 ACCGGAAACCTAAAATGATAGTTACTGAGAATAGTGCTAATGCCctaagaccggaaacctaaaatgatagttactgagaatagtgctaatgcccta e aotNan1.NW_018487412v1 64248 667 + 1028614 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91752899 0 - 128169293 C e saiBol1.JH378358 75303 0 + 223797 C e nomLeu3.chr20 38017 0 + 85365473 C e gorGor5.CYUI01004482v1 7236 0 - 30167 C e panTro5.chrUn_NW_015975002v1 2238 0 + 14113 C a score=3188.000000 s hg38.chr3_KI270784v1_alt 74244 36 + 184404 agaccggaaccctaaaatgatagttactgagaatac s gorGor5.CYUI01004482v1 7236 36 - 30167 agaccggaaacctaaaatgatagttactgagaatac i gorGor5.CYUI01004482v1 C 0 C 0 e aotNan1.NW_018487412v1 64248 667 + 1028614 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91752899 0 - 128169293 C e saiBol1.JH378358 75303 0 + 223797 C e nomLeu3.chr20 38017 0 + 85365473 C e panTro5.chrUn_NW_015975002v1 2238 0 + 14113 C a score=4147.000000 s hg38.chr3_KI270784v1_alt 74280 16 + 184404 tgctaatgccctaagg s panTro5.chrUn_NW_015975002v1 2238 16 + 14113 tgctaatgccctaagt i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 7272 16 - 30167 tgctaatgccctaagt i gorGor5.CYUI01004482v1 C 0 C 0 e aotNan1.NW_018487412v1 64248 667 + 1028614 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91752899 0 - 128169293 C e saiBol1.JH378358 75303 0 + 223797 C e nomLeu3.chr20 38017 0 + 85365473 C a score=1054515.000000 s hg38.chr3_KI270784v1_alt 74296 1026 + 184404 ttttagtcacaccctcacctaggcaggaacccaaccaaaaggggagaactgtggaacaaaCtacgggaggtcattgtttcggtcaccactcccgcattaggccacactgagcaggcaaaaccagaatggagacactcacgctgaatgacacacaacgaagctgaaactttaaggaagtagatagatcccaaaagagctccctttttccctgaagagattccagtctacctgagtcagcataaagaagtcccctctgctttaattcttaccaaaacaagtaacttgaagtaatctgttattaacaaatcagttgttattttctattgctctattt--------ccgccttacacaacacagtgttctgctattgcccagagggcactGAG------ACC-AAATAAAACTTGAAAATGCCACACTGAAAGCAAATaagtcctaataactcaatttacaacgataacaaagagtgacaccaatgcccaaagttttgatcaatatctcaaaattgagaggctgaccaaaagggaggaattcttacatcaaacaacatttgggCTCTAGAAGCCTCCCAAGGAGTCCTTGTAAAGAGT-----CGCggccgggcgccgtggctcacgcctgtaatcccggcactttgggaggccgagacgggtggatca--tgaggtcaggaaatcgagaccatcatggcttacaaggtgaaacccagtctctactaa--------------------------------------------aaaaaaa---tacaaa----aaaattagccggacttggtggcggcagcctgcagtcccagctactcgggaggccgggacaggagaatgacatgaacccgggaggcggagcttgctgtgagctgagatcgcgccactgcactccagcctgggcgac-agagcgagactccgcctc-----aaaaaagaaaaaagaagaagaacaagaagaa------tcgca-acctaatttagtatagaaacaaactgtaaatctgacttgggaatgtatcatggtaacaaatagcggcggttcagccaatcacatcagccgagtgtcagtcaatggccggcagccagctgttc s panTro5.chrUn_NW_015975002v1 2254 1023 + 14113 ttttagtcacaccctcacctaggtaggaacctaaccaaaaggggagaaCtgttgaacaaattacgggaggtcattgttttggtcacaactcctgcattaggccacactgagcaggcaaaaccagaatggagacactcacgctgaatgacacacaacgaagctgaaactttaaggaagcagatagatcccaaaagagctccctttttccctgaagagactccagtctacctgagtcagcataaagaagtcccctctgctttaattcttaccaaaacaagtaacttgaagtaatctgatattaacaaatcagttgttattttctattgctctattt--------ccgccttacacaacacagtgttctgctattgcccagagggcactGAG------ACC-AAATAAAACTTGAAAATGCCACACTGAAAGCAAATaagtcctaataactcaacttacaacgataacaaagagtgacaccaatgcccaaagttttgatcaatatctcaaaattgagaggctgaccaaaagggaggaattcttacatcaaacaacatttgggCTTTAGAAGCCTCCCAAGGAGTCCTTGTAAAGAGT-----CGCggccgggcaccgtggctcacgcctgtaatcccggcactttgggaggccgagacgggtggctca--tgaggtcaggaaatcgagaccatcatggcttacaaggtgaaacccagtctctactaa--------------------------------------------aaaaaaaaaatacaaa----aaaattagcgggacttggtggcggcagcctgcagtcccagctactcgggaggccgggacaggagaatggcatgaacccgggaggcggagcttgctgtgagctgagatcgcgccactgcactccag-------------agcgagactccgccta-----aaaaaaaaaGAaagaagaagaagaagaagaagaagaaTCgca-acctaatttactatagaaacaaactgaaaacctgacttgggaatgtatcattgtaacaaatagcggcggttcagccaatcacatcagccgagtgtcagtcaatggccggcagccagctgttc i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 7288 1024 - 30167 ttttagtcacaccctcacctaggtaggaacctaaccaaaaggggagaaCtgttgaacaaattacgggaggtcattgttttggtcacaactcccgcattaggccacactgagcaggcaaaaccagaatggagacactcacgctgaatgacacacaacaaagctgaaactttaaggaagtagatagatcccaaaagagctccctttttccctgaagagattccagtctacctgagtcagcataaagaagtcccctctgctttaattcttaccaaaacaagtaacttgaagtaatctgatattaacaaatcagttgttattttctattgctctattt--------ccGCCTTACACAACACAGTGTTCTGCTATTGCCCAGAGGGCACTGAG------ACC-AAATAAaacttgaaaatgccacactgaaagcaaataagtcctaataactcaatttacaacgataacaaagagtgacaccaatgcccaaagttttgatcaatatctcaaaattgagaggctgaccaaaagggaggaatTCttacatcaaacaacatttgggctttagaagcctcccaaggagtccttgtaaagagt-----cgcggccgggcgccgtggctcacgcctgtaatcccggcactttggga-gccgagacgggtggatca--tgaggtcaggaaatcgagaccatcatggcttacaaggtgaaacccagtctctactaa--------------------------------------------aaaaaaa---tac-aa----aaaattagccggacttggtggcggcagcctgcagtcccagctactcgggaggccgggacaggagaatggcatgaacccgggaggcggagcttgctgtgagctgagatcgcgccactgcactccagcctgggcgac-agagcgagactccgcctc-----aaaaaagaaaaaagaagaagaagaagaagaa------tcgca-acctaatttagtatagaaacaaactgaaaatctgacttgggaatgtatcatggtaacaaacagcggcggttcagccaatcacatcagccgagtgtcagtcaatggccggcagccagctgttc i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 38017 1032 + 85365473 ttttagtcacaccctcacctaggtaagaacctaaccaaaaggcgagaaCtgttgaacaaattacaggaggtcactgttttggtcagaactcctgcattaggccacactgggcaggccaaaacagaatggagacactcatgctgaatgacacacaacgaagctgaaactttaaggaagtagatagatcccaaaagagctccctttttccctgaagagattccaatctacctgagtcagcataaagaagtcccctctgctttaattcttaccaaaacaagtaacttgaagtaatctgatattaacaaatcagttgttattttctattgctctgttt--------ccgccttaaacaacacagtgttctgctattgcccagaaggcactAAG------ACC-AAATAAAACTTGTAAATGCCACACTGAAAGCAAATAAGTCCTAATAACTCAATTTACAATAATAACAAACAGTGACACCAATGCCCAAAGTTTTGATCAATATCTAAAAATTGAGAAGCTGGCCAAAAGGGAGGAATTCTTACATCAAACTACATTTGGGCTTTAGAAGCATCCCAAAGAGTCCTTGTAAAGAAT-----CGCggccgggtgccgtggctcacgcctgtaatcctggcactttgggaggccaagacgggtggatca--cgaggtcaggaaatcgagaccatccaggcttacaaggtgaaacccagtctatactaa--------------------------------------------aaaaaaa--atacaaa----acaattggccggacgtggtggcggcagcctgtagtcccagctactcgggaggccggggcaggagaatggcatgaacccgggaggcggagcttgcagtgagctgaaatcgcgccactgcactccagcatgggccac-agagcgagactccacctcaaaaaaaaaaaaaaaaaaaaaaaaGGAGAAGAAgaa------tcgca-acctactttagtatacaaacaaactgaaaatctgacttgggaatgtatcattgtaacaaatagcggaggttcagccaatcatatcagccgagtgtcagccaatggcaggcagccagctgttc i nomLeu3.chr20 C 0 I 2094 s calJac3.chr8 91752899 1075 - 128169293 ttttgctcacactctcacctcggtgagaacctaaccaaagatggag-aCtgttaaacaaattatgggaagacactgttttggtctgaactcctgcaatgggccactttgaacaggcccaaccacaatggagacagtcatgctgaatgccacacaaccaagctgaaactttacggaagcagatagattgcaaaagcgatcactttttccctgaagagattccagtctaccagagttagcataaggaagtcccctcggctttaattctaaccaaaacaagtaac----------ctgatattaaccaatcagttgttattttccattgttctgtttctttgttcccacctt-----acatagtattctgctattgcccagggggcgctAAGAACAACAACAAAAAAAAACTTGTAAATGCCAAACTGAAAACAAAAACATccaaataacccaatttacaatggtagcaaagagtgacatcaatgctcagagctttggtaaatatctcaaaattgagaggctga-ggaaggggaagaatTTTTATATCAAACTACATTTGGGCTTTAGAAGCCTCCAAAGGAGTCATTGTAAAGAACTACAACGTggccaggagtgttggctcatgcctgtaatccaggcactttaggaggctgaggcagaaggatcacctgagttcggaggtttgggaccagcctgaccaacatggggaaagcccgactctactgaaaatacaaaattatataagctgacagacattgtaaggaaaaaaaaaagaaaaaaaacaaaaaacaaaattagtcgaatgtggtggcacatgcctgtaatcccacctacttggaaggctcaggcaggagaatcgcttgaacctgggaggcagagttagtgatgagctgagattgcactattgcactcaagcctgggcaataagagcaaaa--------------aacaaaacgaaacaaaacaaaaaACAAAACa------ctgcattcctaatttagtatataaagcaactgaaaacctgacttgggaatttatcattgtaacaaagagcagaggttcagccaatcacatcagcggagtgtcaaccaatggcaggcagccagctgttc i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 75303 1051 + 223797 ttttgttcacactctcacctaggtg-----------------------CGgttaaacaaattatgggaagacactgttttgctctgaactcctgcaataggccacactgaacaggcctaaccacaatggagacagtcatgctgaatgccacacaacaaagctgaaactctacggaagcagatagatcgcaaaagcgatcgctttttccctgaagagattccagtctaccagagtaagcataagaaagtccccttggctttaactctaaccaaaacaagtaacctgaagtaatctgatattaaccaatcagttgttattttctatcattctgtttctttgttcccaccttaca-aacatagtgttctgctcttgtccagtagggGCTAAG------ACCAAAAGAAAACTTGTAAATGCCAAACTGAAAGC-ACAACATccaaataacccaatttacaatggtagcaaagagtgacatcaatgctcaaagctttggtaaatatctcaaaattgagaggctgacaaaaggggaagaatTTTTACATCAAACTACATTT-GGCCTTAGAAGCCTCCAAAGGAGTCCTTGTAAAAAACTGTCACCTggccaggagtggtggctcaggcctgtaatccaggcactttaggaggctgaggcagaaggatcacctgagttcggaggcttgggaccagcctgaccaacatggagaaagcccgactctactaaaaacacaaaattatataagctgacagacattgtagg--------aaaaaaaaaaaagaaaatacaaaattagttggatgtggtggcacatgtctgtaatcccagtaagtgggaaggctcaagcaggagaatcgcttgaacctgggaggcagagttagcaatgagctgagactgcaccattgcactcaagcctgggcaacaagagcaaaa--------------aacaaaacaaaatgaaacaaaaaaCAAAgaa------ctgca-tcctaatttagtacataaacaaactgaaaacctgacttgggaatttatcattgtaacaaggagcagaggttctgccaatcacatcagctgagtgtcagccaaaggcaggcagccagctgttc i saiBol1.JH378358 C 0 C 0 e aotNan1.NW_018487412v1 64248 667 + 1028614 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I a score=1186557.000000 s hg38.chr3_KI270784v1_alt 75322 1038 + 184404 aaaacaagttccaagaaggcaaatccgggctgtaaccaggtctgtaaccaatccagccacctctatacctcacttctgtcttctgtatgtcacttt-ttttctctggctataaatataacccgcacatgttgtgtggcagatcattctgaaccatttttggtctggactgctgcctgattctagaaccacaaaaaaa-gccaattaagatctgcaaacccacatttgttgtaattttgtattttaacaGTTGTGCCCTACAAAAGACATTAAGCTGAAATTAA-TTAAAAATCATTTACGGTCATGATTAGGTCATAAAAAATTGTCAAACATAACAATTCTTCAAAAAA-AGCTAAAAAGTATATTTTAAAAACATTGTTGATGGAaaaaagagtgcaaaagtagataggaaaattatgtacaaaactaaaaacagaggagaaattaaaagtcaaat---------aattgcatcaaactggaaaccta-gaaaaaatgggtgatttcctagtaaaaatacacattaacaaaatgggcactgaaataaggcaactatgaatataccaattagcatagaaaagctaagaaaggtccttaaagatctcccagtggaaaaaggccccaggaccatctgggtccatagctTAGTGTAAGCTGAC-TTAACTAAATGTGATTTTACACTCGTGCattgcatacatacgatggtggtcccatgagataaaaatggagctgaaaaattccttcctagccatcttgtcataagctcatggctcaacgcattaccttttctctgttctgataccatgaaaggaaaataaatctcaggacccccaaatcactaagccaagggaaaagtcaagctgggagctatgtcaggcaaacctgcc-ctcattctattcctaa----gatagctacaaagataaaaagctacatacctcactcacaatttgcccacaaagaatttccttttggacaaaggacagacagcactcaaagtcatcc--------ctcacctgagacagatgcatatctgattgcttcctctgccctattatttat s panTro5.chrUn_NW_015975002v1 3277 1039 + 14113 aaaacaagttccaagaaggcaaatccgggctgtaaccaggtctgtaaccaatccagccacctctatacctcacttctgttttctgtatgtcacttt-ttttctctggctataaatttaacctgcacatattgtgtggcagatcattcggaaccatttttggtctggactgctgcctgattctagaaccacaaaaaaaagccaattaagatctgcaaacccacatttgttgtaattttgtattttaacaGTTGTGCCCTACAAAAGACATTAAGCTGAAATTAA-TTAAAAATCATTTACGGTCATGATTAGGTCATAAAAA-TTGTCAAACATAA---TTCTTCAAAAAA-AGCTAAAAATTATATTTTAAAAATATTGTTGATGGAAAAAAGAGTGCAAAAGTAGATAGGAAAATTATGTACAAAACTAAAAACAGAGGAGAAATTAAAAGTCAAAT---------AATTGCATCAAACTGGAAACCTA-GAAAAAATGGGTGATTTCCTAGTAAAAATACACATTAACAAAATGGGCACTGAAATAAGGCAACTATGAATATACCAATTAGCATAGAAAAGCTAAGAAAGGTCCTTAAAGATCTCCCAGTGGAAAAAGGCCCCAGGACCATCTGGGTCCATAGCTTAGTGTAAGCTGAC-TTAACTAAATGTGATTTTACACTAGTGCattgcatacatatgatggtggtcccatgagataaaaatggagctgaaaaattccttcctagccatcttgtcataagctcatggctcaacgcattaccttttctctgttttgataccatgaaaggaaaataaatctcaggacccccaaatcactaagccaagggaaaagtcaagctgggagctatgtcaggcaaacctgcc-ctcattctattcctaactaagatagctacaaagataaaaagctacatacctcactcacaatttgcccacaaagaatttccttttggacaaaggacagacagcactcaaagtcatcc--------ctcacctgagacagatgcatatctgattgcttcctctgccctattatttat i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 8312 1040 - 30167 aaaacaagttccaagaaggcaaatccgggctgtaaccaggtctgtaaccaatccagccacctctatacctcacttctgttttctgtatgtcacttt-ttttctctggctataaatataacccgcacatgttgtgtggcagatcattctgaaccatttttggtctggactgctgcctgattctagaaccacaaaaaaaaagccattaagatctgcaaacccacatttgttgtaattttgtattttaacaGTTGTGCCCTACAAAAGACATTAAGCTGAAATTAA-TTAAAAATCATTTAC-GTCATGATTAGGTCATAAAAAATTGTCAAACATAACAATTCTTCAAAAAA-AGCTAAAAAGTATATTTTAAAAATACTGTTGATGGAAAAAAGAGTGC-AAAGTAGATAGGAAAATTATGTACAAAACTAAAAACAGAGGAGAAATTAAAAGTCAAAT---------AATTGCATCAAACTGGAAACCTA-GAAAAAATGGGTGATTTCCTAGTAAAAATACACATTAACAAAATGGGCACTGAAATAAGGCAACTATGAATATACCAATTAGCATAGAAAAGCTAAGAAAGGTCCTTAAAGATCTCCCAGTGGAAAAAGGCCCCAGGACCATCTGGGTCCATAGCTTAGTGTAAGCTGAC-TTAACTAAATGTGATTTTACACTCGTGCATTGcatacatatgatggtggtcccatgagataaaaatggagctgaaaaattccttcctagccatcttgtcataagctcatggctcaacaaattactttttctctgttctgataccatgaaaggaaaataaatctcagga-ccccaaatcactaagccaagggaaaagtcaagctgggagctatgtcaggcaaacctgcc-ctcattctattcctaactaagatagctacaaagataaaaagctacatacctcactcacaatttgcccacaaagaatttccttttggacaaaggacagacagcactcaaagtcatcc--------ctcacctgagacagatgcatatctgattgcttcctctgccctattatttat i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 41143 1039 + 85365473 aaaacaagttccaagaaggcaaatctgggctgtaaccaggtctgtaaccaatccagccatctccatacctcacttctgttttctgtatgtcacttt-ttttctctggctataaacataa----cacatgttgtgtggcagatcattctgaaccatttttggtctggattgctgcctgattctagaaccacaaaaaaaagccaattaagatctgcaaacccacatttgttgtaattttgtattttaacaGTTGTGCCCTGCAAAAGACATTAAGCTGAAATTAA-TTAAAAATCATTTACGGTCATGATTAGGTCATAAAAAATTGTCAAACATAACAATTCTTCAAAAAA-AGCTAAAAAGTATATTTTTAAAATATTGTTGATGGAAAAATGAGTGCAAAAGTAGATAGGAAAACTATGTACAAAACTAAAAACAGAGGAGAAATTAAAAGTCAAAT---------AATtgcatcaaactggaaaccta-gaaaaaatgggtgatttcctagtaaaaatacacattaacaaaatgggcactgaagtaaggcaactatgaatagaccaattagcatagaaaagctcggaaaggtccttaaagatctcccagtggaaaaaggccccaggaccatctgggtccatagcTTAGTGTAAGCTGAC-TTAACTAAATGTGAGTTTACACTCGTGCattgcatacatctgatagtggtcccatgagataaaaatggagctgaaaaattccttcctagccatcttgtcataagctcatggctcaacacattaccttttatgtgttttgataccatgaaaggaaaataaatctcaggacccccaaatcaccaagccaagggaaaagtcaagctgggagctatgtcaggcaaacttgcc-ctcattctattcctaagtaagatagctacaaagataaaaagctacatacctcactcacaatttgcccacaaagaatttcctttaggacaaaggacagacagaatgcaaagtcatcc--------ctcacctgagaccaatgcatatctgattgcttcctctgccctattgtttat i nomLeu3.chr20 I 2094 C 0 s calJac3.chr8 91753974 1049 - 128169293 aaaacaggttccttgaagagaaatgc-ggctgtaaccaactctttaaccaatccagccatctctatacctcacttctgttttctgtatgtcactttcctttctctggctataaatataccctgcacatgtcgtgtggcagagcattctgaaccatttttggtctggacagctgcccgattctacaaccacaaacgaaagccaattaagatttgtaaacctacatttgttgtaattatgtcttttaacaGTTGGATCCTGCAAAAGACATTAAGCTAAAATTAA-TAAAAAATCATTTAAGGTCATAATTAGGTCATAAGAAATTGTCA-----AACGATTCTTCAAAAAACAGCTAAAAAGTGTATTTTAAAAATATTGTTGAT---AAAAAAAGTACAAAAGTAGATAGAAAAATTATGGACAAAACTAAAAAC--AGGAGAAATTAAAAGTAAAATAAGAGAACCAATTGCATCaaactgaaaaccttaaaaaaaatggacgatttcctagtaaaaatacacattaacaaaatgggcaatgaagtaaggcaactaccaacagaacaattagaatagaaaagcttggaaaggtccttaaagatctcccagtagaaaagag-ccaaggaccatctgggttcatagctTAGTGTAAGCTGACTTTAACTAAATGTGATTTTATAGGCATGCatcacgtacat--gatagtggttccatgagataataatgtagctgaaaaatttcttcctagccatcttgtcataagctcatggctcaactcattacctgatctaagttttgataccttaaaaggaaaataaatctcaaaacccccaaatcactaagccaagggaaaagtcaagctgggagctatgtcaagcaaatctgcctctcattctattactaaataagagcgccacaaagataaaaatctacatacctccctcacaatttgtccacaagtaatttccttgtggacaaaaaacaaacagaactc--agtcatccctctgaggctcactggagacaaatgtatatttaattgattcctctgtcctattgtttat i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 76354 1029 + 223797 aaaacaggttccgtgaagggaaaagcaggctgtaaccagctctttaaccaatccagccatctctatacctcacttctgttttctgtatgtaactttcctttctctggctataaatatatcctgtacatgtcgtgtggcagacctttctgaaccatttttggtctggactgctgcctgattctacaaccacaaacaaaagccaattaagatctgtaaacctacatttgttgtaattctgtcttttaacaGTTGGATCCTGCAAAAGACATTAAGCTGAAATTAATTAAAAAATCATTTAAGGTCATAATTAGGTCATAAGAAATTGTCAAAC--AACAATTCTTTAAAAAACAGCTAAAAAGTATATTTTTTAAATATTGTTGAT----AAAAAAGTGCAAAAGTAGATAGAAAAATTATGGGCAAAACTAAAAAC--AGGACAAATTAAAAGTAAAATAAAAGAATCAACTGCATCAAACTGAAAACCTT-AAAAAAATGAGTGATATCCTAGTAAAAATACACATTAACAAAATGGGTAATGAAGTAAGGCAACTATGAATAGAACAATTAGCATAGAAAAGCTTGGAAAGGTCCTTAAAGATCTCCCAGTGGAAAAGAG-CCAAGAACCATCTGGGTTCACAGCTTAGTGTAAGCTGACTTTAACTAAATGTGATTTTACAGTCATGCatcacatacat--gatggtggttccatgagataatagtggagctgaaaagttccttcctagccatcttgttgtaagctcatggctcaatgcat-------------------taTCTtaaaaggaaaataaatctcagaaccccgaaatcactaagccaagagaaaagtcaacctgggagctatttcaagaaaacctgcctctcattctattactaaataagagagacacaaagataaaaatctacatacctccctcacaatttgcccacaagtaattttcttgtggacaaa----aaacagaactc--actcatccctctgaggctcactggagacaaatgtatatttaagtgattcctctgccctattgtatat i saiBol1.JH378358 C 0 C 0 e aotNan1.NW_018487412v1 64248 667 + 1028614 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I a score=1109669.000000 s hg38.chr3_KI270784v1_alt 76360 777 + 184404 gtaaaaatgcagattcattgagccagactaaattgtgtat--tcagtggaaggctgatgaaggattcaaaagaatgcaaccttttgtctctaacctacttctgacctggaagcacccccacttcctgcttccagttgtcccgccttactgggccaaatgac---------tgtacatcttac---acgtctcatgtatccctaaaatgtacaaaagcaagctctaccctggccaccttggacacacgtcgtcaggacctcctgaggc----tgtgtcatgggcgtgtccttaatcttggcaaaataagctttctaaattgactgagacctgtctcagatattctgggatcacaatctacaatcac-catggtgttatggttgactacagcattcagtacagagacatgctgtacaggttcgtagcctgggagcaataggcta--tactatgtaacttaggtgtggagtgggctacaccatctaagttttataaggacactctacagtgttcacacaaagatgaaatcacctaaggacagatttctcagaaagtat-aacatcgttacgagatgcct----------------------------------------------------------------------------------------------gagtgTATTTTAAATGGTCAAAGCCTAGGAG--AAAAAAAGAAACTTAACTCTTGTTATGGGTTAATAACAAAGCTTAAGAGAGTTAAcatatttcatctaatctaagatgccaatgatt-aaaagacattactttatgcaccatcacaaataggttgccaattaaacCGACTTTCTGAAT---AACACACAAATGTGAATTTACTTCTATTAATGCCAGGAAAGTAAA s panTro5.chrUn_NW_015975002v1 4316 777 + 14113 gtaaaaatgcagattcattgagccagactaaattgtgtat--tcagtggaaggctgatcaaggattcaaaagaatgcaaccttttgtctccaacctacttctgacctggaagcacccccacttcctgcttccagttgtcccgccttactgggccaaatgac---------tgtatatcttac---acgtctcatctatccctaaaatgtacaaaagcaagctctaccctggccaccttggacacatgtcgtcaggacctcctgaggc----tgtgtcaagggtgtgtccttaatcttggcaaaataagctttctaaattgactaagacctgtctcagatattctgggatcacaatctacaatcac-catggtgttatagttgactgcagcattcagtacagagacatgctgtacaggttcgtagcctgggagcaataggcta--tactatgtaacttaggtgtggagtgggctacaccatttaagttttataaggacactctacagtgttcacacaaagatgaaatcacctaaggatagatttctcagaaagtat-aacatcgttacgagatgcct----------------------------------------------------------------------------------------------gagtgTACTTTAAATGGTCAAAGCCTAGGAG--AAAAAAAGAAACTTAACTCTTGTTATGGGTTAATAACAAAGCTTAAGAGAGTTAAcatagttcatctaatctaagatgccaatgatt-aaaaaacattattttatgcaccatcacaaataggttgccaattaaacCGACTTTCTGAAT---AACACACAAATGTGAATTTACTTCTATTAATGCCAGGAAAGTAAA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 9352 777 - 30167 gtaaaaatgcagattcattgagccagactaaattgtgtat--tcagtggaaggctgatgaaggattcaaaagaacgcaaccttttgtctctaacctacttctgacctggaagcacccccacttcctgcttccagttgtcccgccttactgggccaaatgac---------tgtacatcttac---acgtctcatgtatccctaaaatgtacaaaagcaagctctaccctggccaccttggacacacatcgtcaggacctcctgaggc----tgtgtcacgggcgtgtccttaatcttggcaaaataagctttctaaattgactgagacctgtcccagatattctgggatcacaatctacaatcac-catggtgttatggttgactacagcattcagtacagagacatgctgtacaggttcgtagcctgggagcaataggcta--tactatgtaacttaggtgtggagtgggctacaccatctaagttttataaggacactctacagtgttcacacaaagatgaaatcacctaaggacagatttctcagaaagtat-aacatcgttacgagatgcct----------------------------------------------------------------------------------------------gagtgTATTTTAAATGGTCAAAGCCTAGGAG--AAAAAAAGAAACTTAACTCTTGTTATGGGTTAATAACAAAGCTTAAGAGAGTTAAcatatttcatctaatctaagatgccaatgatt-aaaagacattattttatgcaccatcacaaataggttgccaattaaactGACTTTCTGAAT---AACGCACAAATGTGAATTTACTTCTATTAATGCCAGGAAAGTAAA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 42182 778 + 85365473 gtaaaaatgcagattcattgagccggactaaattgtgtat--tcagtggaaggctgatcaaggattcaaaagaatgcaaccttttgtctctaacctacttctggcctggaagcacccccacttcctgcttccagttgtcctgccttactggaccaaatgac---------tgtacatcttac---acgtctcatgtatccctaaaacgtataaaagcaagctctaccctggccaccttgggcacatgttgtcaggacctcctgaggc----tgtgtcatgggcgtgtccttaatcttggcaaaataagctttctaaattgactgagacctgtctcagatattctgggatcacaatctgcaatcac-cacggtgtt-tggctgactacagcgttcagtacagagacatgttgtacaggtttgtggcctgggagcaataggcta--tactatgtagcttaggtgtggagtgggctacaccatctaggttttctaagaacactctacagtgttcgcacaaagatgaaatcacctaaggacagatttctcagaaagtat-aacatcgttacaagatgctt----------------------------------------------------------------------------------------------gagtgTATTTTAAATGGTCAAAGCCTAGGAGAAAAAAAAAGAAACTTAACTCTTGTTATGGGTTAACAACAAAGCTTAATAGAGTTAAcatatttcatctaatctaagatgccagtgatt-aaaagacattattttatgcaccatcacaaataggttgccaattaaacCGACTTTCTGAAT---AACACACCAATGTGAATTTACTTCTGTTAATGCCAGGAAAGTAAA i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91755023 825 - 128169293 gtaaaaatgaagattcactaagccagactaaattgtgtattctcggtggaaggctgatcaagggttcaaaagaatgcaaccttttgtgtcttatctacttctgacttggaagcaccaccacttcctgcttccagtggtcacaccttactggaccaaacaac---------tacacatattaattgatgtgt---------------------aaaacaagcactacactgaccaccatggacatatgttgtcaggacctcctgaggcggtgtgtgtaatgggcgtgtccttaaccttggcaaaatacactttctaaat----tgagacctgtctcagatattttgggttcacaatccacaattgcacatggtgttatagttaactacagcatttagtacagtgacatgctgtccaggttggtagcctgggagcaacaggcta--taccgtataacttaggtgtgaagtgggatacacaatctaggcttgataaggaca--ctgaggtgttcattaaaaaataaaatcacctaaagacaaatgtctcagaaagtatccctatcgttGGGACATGCTTCTGCGTATTTTCTTCTTTTTTAAATTTTACTTTGTATTTTTCCTTTGCT------------------TCAGACATAGATGGTTGTTTGAACCTTGTGTATATTTTAAATAGCCAAAGCCTAGGAG--AAAAAAAGAAACTCAATTTCTGTTATAGTTTAAT---AAAGCTTAATAGAGTTAATAtgttccttctaatctgagatgccaatgatt-aaaagacattattttatgcac------aaataggttgccaattaaacCGAC-TTCTGAAT---AACAAA--AATGTAACTTTACGTGTATTAATACCAGGAATGAAAA i calJac3.chr8 C 0 I 273 s saiBol1.JH378358 77383 814 + 223797 gtaaaaatgaagattcactgagccagactaaattgtgtat--tcagtggaaggct-------ggttcaaaagaatgaaaccttttgtctcttacctacttctgacctggaagcacccccacttccagcttccagttgtcacgccttactggaccaaacaac---------tacacatattaattgatgtgt---------------------aaaacaagcgctacactgaccaccatggacacctgttgtcaggacctcctgaggc--tgtgtgtaatgggcttgtccttaaccttggcaaaatatgctttctaaat----tgagacctatctcagatattttgggttcacaATCCACAATTGCAcatggtgttatagttaactacagcatttaatacagtgacatgctgtccagtttggtagcctgggagcaataggcta--tatcgtataacttagatgtggagtgggatacaccgtctaggtttgataaggaca--ctgaggtgttcattcaaaaataaaatcacctaaagacaaatgtctcagaaagtattcatatcattGGGACATGCTTCTGTGTATTTTGTTCTTTTTTAAAT------------------GTCACTTTATATTTTTCCTTTGCCTCAGACATAGATGGTTGTTTGAACTTCGTGTGTATTTTAAATGGCCAAAGCCTAGGAG------AAATAAACTCAATTCCTGTTATAATTTAAT---AAAGCTTAATAGAGTTAACa--ttccatctaatctaagatgccaatgatt-aaaagacattattttatgcaccattaaaaataagttgccaattaaactGAA-TTCTGGAT---AACAAA--AATGTGAATTTGCTTGTATTAATGCCAGGATAGTAAA i saiBol1.JH378358 C 0 C 0 s aotNan1.NW_018487412v1 64915 782 + 1028614 gtaaaaatgcagattcactaagtcagactaaattgtgatt--gcagcgtaaggcggatcaaggaagcaaaagaatgcaaccttttgtctcttctctacttctgacctggaagcaccaccacttcctgcttctagttattccgccttactggaccaaatgactgtacatcttacacatattgattggtgtctcatgtctccctaaaatgtataaaagcaagctctaccctgaccactttgggcacatgttgtcaggacctgctgaggc----tgtatcatgagcatgtccttaaccttagcaaaataagctttctaaattgactgagacctgtctcagatattttgggatcacaatccacaatcac-catggtgtgaaaggtggctacagcattcagtacagagacctgctatacaggtttgcagcctgggagcaataggctatgtatcatataacttacgtgtg--------tacaccatctggtttttataacgacactctatggtgttcgcacaatgatgaaatca-ctaagaacaaatttctcagaaagtatccacatcgttaggagatgctt----------------------------------------------------------------------------------------------gagtgTATTTGAAATGATTAAAGCCTGGGAGAAAAAAAAAGAAAATCAATTCCTGTTACGGTTTAATAACAAAGCTTAAAAAAGTTAACATATTTC-----ATCTAGAATGCCAATGATTAAAAAGACATTATTTTATGCACCATCACAAATAGGTTGCCAATCGAACTCACTTTCTGAATAACAACAAA--AATGTGAATTCACTTCTACTAATGCCAGGAAAGTAAA i aotNan1.NW_018487412v1 I 667 C 0 e cebCap1.NW_016107703v1 369623 436 - 2125214 I a score=20914.000000 s hg38.chr3_KI270784v1_alt 77137 22 + 184404 ATGAAAAATAAATTATGGTTTT s panTro5.chrUn_NW_015975002v1 5093 22 + 14113 ATGAAAAATAAATTATGGTTTT i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10129 22 - 30167 ATGAAAAATAAATTATGGTTTT i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 42960 22 + 85365473 ATGAAAAATAAATGACGGTTTT i nomLeu3.chr20 C 0 C 0 s saiBol1.JH378358 78197 21 + 223797 ATG-AAAAGGAGTTATGGGttt i saiBol1.JH378358 C 0 I 262 s aotNan1.NW_018487412v1 65697 21 + 1028614 ATG-AAAATGAATTATGGTTTT i aotNan1.NW_018487412v1 C 0 C 0 e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91755848 273 - 128169293 I a score=12290.000000 s hg38.chr3_KI270784v1_alt 77159 14 + 184404 GACATGTTAAAGCA s panTro5.chrUn_NW_015975002v1 5115 14 + 14113 GACAtgttaaagca i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10151 14 - 30167 GACAtgttaaagca i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 42982 14 + 85365473 GACATGTTAAAGCA i nomLeu3.chr20 C 0 C 0 s aotNan1.NW_018487412v1 65718 14 + 1028614 CACATGTTAAAGCA i aotNan1.NW_018487412v1 C 0 I 15 e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91755848 273 - 128169293 I e saiBol1.JH378358 78218 262 + 223797 I a score=6119.000000 s hg38.chr3_KI270784v1_alt 77173 12 + 184404 AATACGGCGGGG s panTro5.chrUn_NW_015975002v1 5129 12 + 14113 aataaggcgggg i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10165 12 - 30167 aatacggcgggg i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 42996 12 + 85365473 AATAAGGCGGGG i nomLeu3.chr20 C 0 C 0 e aotNan1.NW_018487412v1 65732 15 + 1028614 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91755848 273 - 128169293 I e saiBol1.JH378358 78218 262 + 223797 I a score=1000.000000 s hg38.chr3_KI270784v1_alt 77185 1 + 184404 G s panTro5.chrUn_NW_015975002v1 5141 1 + 14113 g i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10177 1 - 30167 g i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 43008 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s aotNan1.NW_018487412v1 65747 1 + 1028614 G i aotNan1.NW_018487412v1 I 15 C 0 e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91755848 273 - 128169293 I e saiBol1.JH378358 78218 262 + 223797 I a score=364572.000000 s hg38.chr3_KI270784v1_alt 77186 275 + 184404 TTAGCCTGAGGCCTTCCCTAAGCAAACAGAAACCGAACTTGGAGGCATTTGAACTGACTTAAAAAAATTAACAAACCAACCACAGTCAATGCCAAAAAGCCCAGCAGCCAGTTGGCTGTATGACTAGGGCCGCTGAGGGAACCATCCCCACAACAGGCGGTGGCCTAGCTGGAGCCACTGAGGAGCCTCACTTAGGGGCCA-CCCTAAGAGCTCgaagccccaagcc--gatttccgttctggtgcttcccgcgtgattcatgaaccattcctttgct s panTro5.chrUn_NW_015975002v1 5142 275 + 14113 ttagcctgaggccttccctaagcaaacagaaaccgaacttggaggcatttgaactgacttaaaaaaattaacaaaccaaccacagtcaatgccaaaaagctcagcagccagttggctgtatgactagggacgctgagggaaccattcccacaacaggcggtcgcctagctggagccactgaggagcctcacttaggggcca-ccctaagagctcaaagccccaagcc--gatttccgttctggtgcttcctgcgtgattcatgaaccattcctttgct i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10178 275 - 30167 ttagcctgaggccttccctaagcaaacagaaaccgaacttggaggcatgtgaactgacttaaaaaaattcacaaaccaaccacagtcaatgccaaaaagcccagcagccagttggctgtatgactagggacgctgagggaagcatccccaccacaggcggtcgcctagctggagccactgaggagcctcacttacgggcca-ccctaagagctcgaagccccaagcc--gacttccgttctggtgcttcctgcgtgattcatgaaccattcctttgcc i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 43009 275 + 85365473 TTAGCCTGAGGCCTTCCCTAAGCAAACAGAAACCGAACTGGGAGGCATTTAAACTGACTTAAAAAAATTAACAAACCAACCACAGTCCGCGCCAAAAAGCCCGGCAGCCGGTT-GCTGTGTGACTAGCGACGCTGAGGGCACCATCCCCACAGCAGGCGGTCGCCTAGCTGGAGCCACTGAGGAGCCTCCCTTAGGGGCCACCCCTAAGAGCTGGAAGCCCCACGCC--CTTCTCCGTCCTGGGGCTTCCTGCGTGACTCATGCCCCATTCCTTTGCT i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91756121 270 - 128169293 TTAGCCT---GTCTTGCCTAAGCAAACAAAAGCCAAACTTGGAGGCATTTAAACTGACTTAACA----TGACAAATCAACCACAGTCAATAACAAAACGCCCCGCCGCCAGGTGGCTGTCTCACTAGGCATGCTGCGGGAACCACCCACCCAGCAGG-GGTGGCCTAGCTGAAgccaataaaaaacctcactcagctgccaccactaaaagctggacgctccaagccctgttttcccttctggtgctccgtgcgtgattcatgaattgttcatttgct i calJac3.chr8 I 273 C 0 s saiBol1.JH378358 78480 265 + 223797 TTAGTCT---GTCTTTCCTAAGCAAACAAAAGCCAAACTTGGAGGCATTTAAACTGACTTGACA----TTACAGATCAACCACAGCCAATAACAAAACGCCCAGCCGCCAGGTGGCTGTATGACTCGGGATGCTAAGGGAACCACCCACCCAACAGG-GGTGGCCTA----AAGTCAA-AAAAATCCTCCCTCAGCTGCCACCACTAAAAGCTGGAAGCTCCAAGCCCTGTTTTcccttctggtgctttgtgcgtggttcacgaaccattcatttgct i saiBol1.JH378358 I 262 C 0 s aotNan1.NW_018487412v1 65748 276 + 1028614 TCAGCCTGAGGTCTTCCCTAAGCAAACGGAAACTGAACTTGGAGGCATTTGAACTGACCAAAAA--ATTAACCAGCCAGCCACAGTCAATGACGAAAAGCCCAGCCGCAAGTTGGCTGTATGACTAGAGACGCGGAGAAAACCATCCCTACAACAGGCGGTCGGCCAGCTGGAGCCAGTTAGAAACCTCACTAAGCTGCCACCACTAAAAGCTCGAAGCTCCAAGTCCTGTTTTCCTTTCTGGTGCTTCAGGCGTGATTCATGGATCATTCCTTTGCT i aotNan1.NW_018487412v1 C 0 N 0 e cebCap1.NW_016107703v1 369623 436 - 2125214 I a score=74565.000000 s hg38.chr3_KI270784v1_alt 77461 76 + 184404 gaaataaactccgcttaaatttattttacctcaaa---tccttttaaca----AAGTCCAGTATTTACACTTAAAATACGGTT s panTro5.chrUn_NW_015975002v1 5417 80 + 14113 gaaataaactccgcttaaatttattttacctaaaa---tccttttaacaGACAAAGTCCAGTATTTACACTTAAAATACGGTT i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10453 80 - 30167 gaaataaactccgcttaaatttattttacctaaaa---tcctgttaacaGACAAAGTCCAGTATTTACACTTAAAATACGGTT i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 43284 80 + 85365473 GACAGAAACTCCGCTTACATTTATTTTGCCTCAAA---TCCTTTTAACAGACAAAGTCCAGTATTTGCACTTACGATACGGTC i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91756391 79 - 128169293 caaataaactctgcttaaatttattttgcctaaaagtctcctttgaaca----AAGTACACTATTTACACTTAAAATAATGTG i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 78745 79 + 223797 caattaaactctgcttaaatttattttgcctaaaagtctcctttgaaca----AACTACACTATTTACACTTAAAATAATGTG i saiBol1.JH378358 C 0 C 0 e cebCap1.NW_016107703v1 369623 436 - 2125214 I a score=103407.000000 s hg38.chr3_KI270784v1_alt 77537 68 + 184404 GTGAAAACTCACATCTACATCTGCTCTTCAATATTTTTCAAGTACTTTAACACTCTAAGAAAAACGAG s panTro5.chrUn_NW_015975002v1 5497 68 + 14113 GTGAAAACTCACATCTACATCTGCTCTTCAATATTTTTCAAGTACTTTAACACTCTAAGAAAAACGAG i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10533 68 - 30167 GTGAAAACTCACATCTACATCTGGTCTTCAATATTTTTCAAGTACTTTAACACTCTAAGAAAAACGAG i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 43364 68 + 85365473 GTAAAAACTCACATCTACATCTGCGCTTCGATATTTTTCGAGTACTTTAATACTGTAAGAAAAACGAG i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91756470 65 - 128169293 GTGAAAACTCACATCTCCATCTGCTCTTCAATATTTTTCAAGTAC-TCAACCC--TAAGAAAAACCAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 78824 65 + 223797 GTGAAAACTCACATCTCCATCTGCTCTTAAGTAGTTTTCAAGTAC-TCAACAC--TAAGAAAAACGAG i saiBol1.JH378358 C 0 C 0 s cebCap1.NW_016107703v1 370059 67 - 2125214 GTGAAAACTCACATCTCCATCTGCTCTTCAATAGTTTTCAAGTAC-TCAACACTGTAAGAAAAACGAg i cebCap1.NW_016107703v1 I 436 I 166 a score=148710.000000 s hg38.chr3_KI270784v1_alt 77605 134 + 184404 CCACTGGAACGCAAATAAAAGCAAGTCGTGGGGTGCGCGTCTCCCTGGGGCTCTCCATGTTGCCCTCAGGGTTTCTCCCTTCTCTGTCCCGGATCCACCCCAAACAAACCCAAATTGGTCAAAAAT--TAAAAAAT s panTro5.chrUn_NW_015975002v1 5565 134 + 14113 CCACTGGAGCGCAAATAAAAGCAAGTCGTGGGGTGCGCGTCTCCCTGGGGCTCTCCATGTTGCCCTCAGGGTTTCTCCCTTCTCTGTCCCGGATCCACCCCAAACAAACCCAAATTGGTCAAAAAT--TAAAAAAT i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10601 134 - 30167 CCACTGGAACGCAAATAAAAGCAAGTCGTGGGGTGCGCGTCTCCCTGGGGCTCTCCATGTTGCCCTCAGGGTTTCTCCCTTCTCTGTCCCGGATCCACCCCAAACAAACCCAAATTGGTCAAAAAT--TTAAAAAC i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 43432 134 + 85365473 CCACTGGAACGCAAATAAAAGCAAGTCGTGGGGTGCGCGTCTCCCTGGGGCTCCCCGTGTTGCCCTCAGGGGTCCTCCCTTCTCTGTCCCGGATCCACCCCAAACAAACCCAAATTGGGCAAAAAC--TAAAAATT i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91756535 130 - 128169293 CCACTGGAACGTGAATAAAACCAAGCAGTGGGGTGCGCGGCTCCCCGGGGCTCCCCGCACTGCTCTCAGGGTTTCTCCCTTCTCTGTTGCAGATCCACCC----CAAACCCAAATTGGTAAAAAAA--TTAAAAAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 78889 130 + 223797 CCACTGGAACGTGAATAAAACCAAGT-GTGGGGTGCGCGGCTCCCTGGGGCTCCCCGCGCTGCTCTCAGGG-TTCTCCCTTCTCTGTCGCAGATCCACCC----CAAACCCACATTGGTAAAAAAAATTTAAAAAT i saiBol1.JH378358 C 0 I 330 e cebCap1.NW_016107703v1 370126 166 - 2125214 I a score=132687.000000 s hg38.chr3_KI270784v1_alt 77739 132 + 184404 GAAACAACTCAGGTATGCTGTAATAATGAATAACAAAGCCACTTAATGATGGGCCACTTTGTAAAATAAAATAAATACAACTTGAGAAAGTGGAGCGCGAGGCAGCGCGGCCTCCTCAGCACT--GAGCCGGGA s panTro5.chrUn_NW_015975002v1 5699 132 + 14113 GAAACAACTCAGGTATGCTGTAATAATGAATAACAAAGCCACTTAATGATGGGCCACTTTGTAAAATAAAATAAATACAACTTGAGAAAGTGGAGCGCGAGGCAGCGCGGCCTCCTCAACACT--GAGCCGGGA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10735 132 - 30167 GAAACAACTCAGGTATGCTGTAATAATGAATAACAAAGCCACTTAATGATGGGCCACTTTGTAAAATAAAATAAATACAACTTGAGAAAGTGGAGCGCGAGGCAGCGCGGCCGCCTCAGCACT--GAGCCGGGA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 43566 132 + 85365473 GAAACAACTCAGATATGCTGTAACGATGAATAACAAAACCACTTAATGAAGGGCCACTTTGTAAAAGAAAATAAATACAACTCGAGAAAGTGGAGCGCAAGGCAGCGCGGCCTCCCCAGCGCT--GAGCAGGGA i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91756665 130 - 128169293 GAAACAACTCAGGTGTGCTGTAATAGTGAACATCAAAGCCACTCAGTGAAGGGCCACTTTGTAAACGAAAATAAATACAACTTGCGAAACTAAAGC-CA-CGCAGCGCAGCCTCCTC-ACACTCAGGGCGCTG- i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 79349 132 + 223797 GAAACGACTCAGGTGTGCTGTAATAATGACCATCAAAGCCACTCAATGAAGGGCCACTGTGTAAACGAAAATAAATGCAACTTGCGAAACTAAAGC-CAGGGCGGCGCGGCCTCCACGGCACTCAGAGCCCCG- i saiBol1.JH378358 I 330 C 0 e cebCap1.NW_016107703v1 370126 166 - 2125214 I a score=107426.000000 s hg38.chr3_KI270784v1_alt 77871 79 + 184404 CAGAAAGCTTTTTCCTCACCTTTCCTCGGGCAGC-CTCGGGGACCATGAAGCCACAGCTTCCCCAGTCGTTCCTGAGGAG s panTro5.chrUn_NW_015975002v1 5831 79 + 14113 CAGAAAGCTTTTTCCTCACCTTTCCTCGGGCAGC-CTCGGGGACCATGAAGCCACAGCTTCCCCAGTCGTTCCTGAGGAG i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10867 78 - 30167 CGGAAAGC-TTTTCCTCACCTTTCCTCGGGCAGC-CTCGGGGACCATGAAGCCACAGCTTCCCCAGTCGTTCCTGAGGAG i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 43698 79 + 85365473 CAGAAAGCTCTTTCCTCACCTTTCCTCAGGCAGC-CTCGGGGGCCATGAAGCCACAGCTTCCCCAGTCGTTCCTGAGGAG i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91756795 70 - 128169293 CAGAAAGCTTGTTTCTCACCTTTCCTCAGGCAGC-TTTGGGGGTCCTGAAGCCA-CGTTTCCCCAGTCGCTC-------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 79481 72 + 223797 CAGAAAGCTTTTTTCTCACCTTTCCTCAGGCAACTTTTGGGGGTCCTGAAGCCGCCGTTTCCCCAGTCGCTC-------- i saiBol1.JH378358 C 0 C 0 s cebCap1.NW_016107703v1 370292 78 - 2125214 CAGAAAGCTTTTTCTTCACCTTTCCTC-GGCAGC-CTCTGGGGTTCTGCAGCCACAGCTTCCCCAGTCAGTCCTGAGGAG i cebCap1.NW_016107703v1 I 166 I 5187 a score=149837.000000 s hg38.chr3_KI270784v1_alt 77950 130 + 184404 CTGAGGAGAAGGAGGCTGGGTCGTCCCTGGCCACGGTCCCCAGGTGTTCCTAGAGAGCCAGCGGCGTCTCCCGAGTGGGTCCTGAGGAGGAGGAGGCTGGGCCCTCT-CAGGTGTCCCTGTAGGGATGACG s panTro5.chrUn_NW_015975002v1 5910 130 + 14113 CTGAGGAGAAGGAGGCTGGGTCGTCCCTGGCCACGGTCCCCAGGTGTTCCTATAGAGCCAGCGGCGTCTCCCGAGTGGGTCCTGAGGAGGAGGAGGCTGGGTCCTCT-CAGGTGTCCCTGTAGGGATGGAG i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10945 130 - 30167 CTGAGGAGAAGGAGGCTGGGTGGTCCCTGGCCACGGTCCCCAGGTGTTCCTATAGAGCCAGCGGCGTCTCCCGAGTGGGTCCTGAGGAGGAGGAGGCTGGGTCCTCT-CAGGTGTCCCTGTAGGGATGACG i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 43777 129 + 85365473 CTGAGGAGAAGGAGGCTGGGTCGTCCCCGGCCACGG-CCCCAGGTGTTCCTATAGAGACAGTGGCGTCTCCCCAGTGGGTCCTGAGGAGGAGGAGGCGGGGTCCTCT-CAGGTGTCCCTGGAGGGATGGCG i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91756865 131 - 128169293 CCGAGGAAGACGAGGCTGGGTCCTCCCTGGGCACAGTCCCAAGGTGTCCCTGTAGGAACAGTGGCGTCTCCCAGGTAGGTCCTGAGGAGGAAGAGGCAGGGTCCTCTCCAGGTGTCCCTGTAGGGATGGCG i calJac3.chr8 C 0 I 132 s saiBol1.JH378358 79553 131 + 223797 CCGAGGAAGAGGAGGCTGGGTCCTCCCTGGGCACAGTCCCCAGGTGTCCCTGTAGGAACAGTGGCGTCTCCCAGGCAGGTCCTGAGGAGGAAGAGGCAGGGACCTCTCCAGGTGTCCCTGTAGGCATGGCG i saiBol1.JH378358 C 0 I 138 e cebCap1.NW_016107703v1 370370 5187 - 2125214 I a score=254340.000000 s hg38.chr3_KI270784v1_alt 78080 244 + 184404 GCGCCTCCTGCGTAGGTCCTGAGGAGACGGCTCGGCTCCGCCCCCTGGAGCCGCAGGCCGTCTGTGCCGGAACCCGGGCGCCGCTTGAGGTTCTGTGAGGCGGCAT-CGCGCCCCCTGACGGCCGTCGCAGGCGGTGCAGGATGCTCAGGTGCTCGCGGTCGAGCTGTGGCCTCGCCCCTCCGG---------TGGATCTCCGAAGTTCACTGTTCGGACAATTACACGCCATGACTTTTGAAAAACCTGCTGA s panTro5.chrUn_NW_015975002v1 6040 244 + 14113 GCGTCTCCTGCGTAGGTCCTGAGGAGGCGGCTCGGCTCCGCCCCCTGGAGCCGCAGGGCGTCTGTGCCGGAACCCGGGCGCCTCTTGAGGTTCTGTGAGGCGGCAT-CGCGCCCCCTGACGGCCGTCGCAGGCGGTGCAGGATGCTCAGGTGCTCGCGGTCAAGCTGTGGCCTCGCCCCTCCGG---------TGAATCTCCGAAGTTCACTGTTCTGACAATTACACGCCATGACTTTTGAAAAACCAGCTGA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 11075 244 - 30167 GCGCCTCCTGCGTAGGTCCTGAGGAGGCGGCTCGGCTCCGCCCCCTGGAGCCGCCGGGCTTCTGTGCCGGAACCCGGGCGCCTCTTGAGGTTCTGTGAGGCGGCAT-CGCGCCCCCTGACGGCCGTCGCAGGCGGTGCAGGATGCTCAGGTGCTCGCGGTTGAGCTGTGGCCTCGCCCCTCCGG---------TGGATCTCCGAAGTTCACTGTTCTGACAATTACACGCCATGACTTTTGAAAAACCAGCTGA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 43906 244 + 85365473 GCGCCTCCTGGGTAGGTCCTGAGGAAGCGGCTCGGCTCCGCCCCCTGGAGGCGCAGGGCATCTGTGCCGGAACCCGGGCGCCTCTTGAGGTTCTGTGAGGCGGCGT-CGCGCCCCCTGACGGCCGTCGCGGGAGGTGCAGGATGCTCAGGTGCTCGCGGTCGAGCTGTGGCCTCGCCCCTCCGG---------TGAGTCTCCGAAGTCCGCTGTTCTGACAATTACACGCCATGACTTTGGAAAAACCAGCTGA i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91757128 240 - 128169293 GCGCCTCCTGGGTAGGTCCTGAGGAAGAGGCTCAGCTCCGCCCCCTGGAGACACACGGCGTCTGCGCGGGAACACGGGCGCCTCTCGA-------------TGCGTTCACACCCACTGCTGGCCATCGCACGTGGTGCGGAACGCTCAGGTGCTCGCAGTTGAGCTGTAGCAGTGTCCCTCCCACAGACCTT-GGAATCTCTGAAGTCCACGGTTCTGACAATTCCACGCCATGGGTTTTGAAAAATCAGCTGA i calJac3.chr8 I 132 C 0 s saiBol1.JH378358 79822 238 + 223797 GCGCCTCCTGGGCAGGTCCTGAGGAAGAGGCTCGGCTCCGCCCCCTGGAGACACAGGGCGTCTGCGCGGGAACGC-GGCGCCTCTCG---------------GCGTGCACGCCCCCTGCCGGCCATCGCAGGCGGCGCGGACCGCTCAGGTGCTCGCGGTGGAGCTGCGGCAGCGTCCCCCACGCAGACCCTGGGAGTCTCCGAAGTCCACGGTTCTGACAATTCCACTCCATGGCTGTTGAAAAATCAGCTGA i saiBol1.JH378358 I 138 I 7146 e cebCap1.NW_016107703v1 370370 5187 - 2125214 I a score=952.000000 s hg38.chr3_KI270784v1_alt 78324 2 + 184404 gg s panTro5.chrUn_NW_015975002v1 6284 2 + 14113 gg i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 11319 2 - 30167 gg i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 44150 2 + 85365473 gg i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91757368 2 - 128169293 AA i calJac3.chr8 C 0 I 108 e cebCap1.NW_016107703v1 370370 5187 - 2125214 I e saiBol1.JH378358 80060 7146 + 223797 I a score=65844.000000 s hg38.chr3_KI270784v1_alt 78326 134 + 184404 ccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcgcgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtct----ctacaaaaaacaaaaa--aacaaaa s panTro5.chrUn_NW_015975002v1 6286 131 + 14113 ccgggcgcggtggctcacgcctgtaatcccagcactttgggaggtcgaggcgggcggatcgcgaggtcagcagatcgagaccatcctggctaacacggtgaaaccccgtct----ctacaaaaaaaaaaaa--aa---aa i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 11321 133 - 30167 ccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcgcgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtct----ctacaaaaaaaaaaaaccaa---aa i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 44152 135 + 85365473 ccgggcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcggatcgcgaggtcaggagatcaagaccatcctggctaacacggtgaaaccccgtctcccccccccaaaaaaaaata--ca---aa i nomLeu3.chr20 C 0 C 0 e cebCap1.NW_016107703v1 370370 5187 - 2125214 I e calJac3.chr8 91757370 108 - 128169293 I e saiBol1.JH378358 80060 7146 + 223797 I a score=52333.000000 s hg38.chr3_KI270784v1_alt 78460 71 + 184404 aaaaattagccgggagtggtggcgggcgcctatagttccagctactcgggaggctaaggcaggagaatcgc s panTro5.chrUn_NW_015975002v1 6417 71 + 14113 aaaaattagccgggagtggtggcgggcccctatagttccagttactcgggaggctgaggcaggagaatcgc i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 11454 71 - 30167 aaaaattagccgggagtggtggagggcgcctatagttccagctactcgggaggctgaggcaggagaatcgc i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 44287 71 + 85365473 aaaaattagccgggcgtggtggcacgcgcctatagttccagctactcgggaggctgaggcaggagaatcgc i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91757478 71 - 128169293 TGGAATTggccaggcgcggtggctcacgcctataatcccagcacttcgggaggccgaggcaggtggatcac i calJac3.chr8 I 108 I 6337 e cebCap1.NW_016107703v1 370370 5187 - 2125214 I e saiBol1.JH378358 80060 7146 + 223797 I a score=16383.000000 s hg38.chr3_KI270784v1_alt 78531 31 + 184404 ttgaacccgggagggggaggtttcagggagc s panTro5.chrUn_NW_015975002v1 6488 31 + 14113 ttgaacccgggagggggaggtttcagggagc i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 11525 31 - 30167 ttgaacccgggagggggaggtttcggggagc i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 44358 31 + 85365473 ttgaacccgggagggggaggttgcagtgagc i nomLeu3.chr20 C 0 I 6717 e cebCap1.NW_016107703v1 370370 5187 - 2125214 I e calJac3.chr8 91757549 6337 - 128169293 I e saiBol1.JH378358 80060 7146 + 223797 I a score=4134.000000 s hg38.chr3_KI270784v1_alt 78562 5 + 184404 cTCCT s panTro5.chrUn_NW_015975002v1 6519 5 + 14113 cTCCT i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 11556 5 - 30167 cTCCT i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 51106 5 + 85365473 CTGCC i nomLeu3.chr20 I 6717 C 0 s calJac3.chr8 91763886 5 - 128169293 CTGCC i calJac3.chr8 I 6337 C 0 s saiBol1.JH378358 87206 5 + 223797 CTGCC i saiBol1.JH378358 I 7146 C 0 e cebCap1.NW_016107703v1 370370 5187 - 2125214 I a score=13755.000000 s hg38.chr3_KI270784v1_alt 78567 7 + 184404 CTAAACA s panTro5.chrUn_NW_015975002v1 6524 7 + 14113 CTAAACA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 11561 7 - 30167 CTAAACA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 51111 7 + 85365473 CTAAACA i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91763891 7 - 128169293 CTAAACA i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 87211 7 + 223797 CTAAACA i saiBol1.JH378358 C 0 C 0 s cebCap1.NW_016107703v1 375557 7 - 2125214 CTAAACA i cebCap1.NW_016107703v1 I 5187 C 0 a score=6600.000000 s hg38.chr3_KI270784v1_alt 78574 1 + 184404 G s panTro5.chrUn_NW_015975002v1 6531 1 + 14113 G i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 11568 1 - 30167 G i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 51118 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33893983 1 + 185818997 G i rheMac8.chr3 N 0 C 0 s macFas5.chr3 33509911 1 + 192294377 G i macFas5.chr3 N 0 C 0 s macNem1.NW_012019910v1 4271689 1 - 9440265 G i macNem1.NW_012019910v1 N 0 C 0 s cerAty1.NW_012002954v1 16860632 1 - 21915920 G i cerAty1.NW_012002954v1 N 0 C 0 s manLeu1.NW_012101810v1 17400 1 - 2515279 G i manLeu1.NW_012101810v1 N 0 C 0 s calJac3.chr8 91763898 1 - 128169293 G i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 87218 1 + 223797 G i saiBol1.JH378358 C 0 C 0 s cebCap1.NW_016107703v1 375564 1 - 2125214 G i cebCap1.NW_016107703v1 C 0 C 0 a score=6205091.000000 s hg38.chr3_KI270784v1_alt 78575 1065 + 184404 AAAAGACCGACCCCTAGTCAGTGTTTTATTTTCCCTGATGACCGCAGGCCATGAACTTATGGAACAATAACGTAATTAGGCTCTTGGACCCAGGGAAGTAGCTCCATGCCACCTGCCCTCATTTGCTGAGCATTTTGGTTTCTCGGATCTGCTACTCAGTTTCCAGTCTCCTCCTCCCTGCCAATGCTGCCAGCGTGCCTCTTCTGCAAGCAGCAACCGCCTTCCACCTTCCATTCTCTACTCTTTAGCCATCATCTGGCTGGACTTTTCAGAATGGACTGCAAAGGAGAATAAACTGGCTGAGTCTGAGGGTGCACTCACGTGCAAAGTTGCAAGCTTTAATGTACCCATCTTGGCAGATTTTGGCTCCTTAGAGTTCTTTCTCATTTGGGGATCTCATGTGCCCTCTGATGAGGTGGGCTCACTGACTGTCCGCGCTGGTGGCATCTGGCAGCACCTTGTCACGTGCACCTAGGTAAGAACC-TGGCTGCACCTGATGCTTAGCCAAACGGGGAACCCACAGTTCTGTGTATCAGGTGACGTTTAATCTCTGGAGGTTAATGAACGTGAGGGAGCGATACTGTCTGGGACTCTCCACATATTGCGTCTGAGTCACTGAAGGAAAAGAATGTGGGGTCTGTTTGCTGGGACTGGACACCTCCATAATCACATGCTCCATGAAATGCAGGCAGGAGATCTCGCTTTCTACCTCTGGGATGGGAGTGTGCAGTTTCAGAATGAGACTAGCCCACACAACTGACT----ATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATATCTTAATCACAAACACTCTTCTGGTTTTTAGAAATGTGAATGTTATTTACACTAGGTT---AAAAAACCTGAATATCCAACAGCATGACACCGACTAAAGAAATACTGGCGCACTCTGGAAC-CTTGCACACCACTTATTGGCATGGGAACAATGGGAACACGCCTATGCAAAGATGTGCATGGAAATTAGAAGAATGCAACACTGTAGAACAGATGTGACTAGGTGCATGATCAAGAGCACACAAGACCA s panTro5.chrUn_NW_015975002v1 6532 1069 + 14113 AAAAGACCGACCCCCAGTCAGTGTTTTATTTTCCCTGATGACCGCAGGCCATGAACTTATGGAACAATAACGTAATTAGGCTCTTGGACCCAGGGAAGTAGCTCCATGCCACCTGCCCTCATTTGCTGAGCATTTTGGTTTCTCGGATCTGCTACTCAGTTTCCAGTCTCTTCCTCCCTGCCAATGCTGCCAGCGTGCCTCTTCTGCAAGCAGCAACCGCCTTCCACCTTCCATTCTCTACTCTTTAGCCATCATCTGGCTGGACTTTTCAGAACGGACTGCAAAGGAGAATAAACTGGCTGAGTCTGAGGGTGCACTCACGTGCAAAGTTGCAAGCTTTAATGTACCCATCTTGGCAGATTTTGGCTCCTTAGAGTTCTTTCTCATTTGGGGATCTCATGTGCCCTCTCATGAGGTGGGCTCGCTGACTGTCTGCGCTGGTGGCATCTGGCAGCACCTTGCCACGTGCACCTAGGTAAGAACC-TGGCTGCACCTGATGCTTAGCCAAATGGGGAGCCCACAGTTCTGTGTATCAGGTGATGTTTAATCTCTGGAGGTTAATGAACGTGAGGGAGCGATACTGTCTGGGACTGTCCACATATTGCGTCTGAGTCACTGAAGGAAAAGAATGTGGGGTCTGTTTGCTGGGACTGGACACCTCCATAATCACATGCTCCGTGAAATGCAGGCAGGAGATCTCGCTTTCTACCTCTGGGATGGGAGTGTGCAGTTTCAGAATGAGACTAGCCCACACAACTGACTCTTTATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATATCTTAATCACAAACACTCTTCTGGTTTTTAGAAATGTGAATGTTATTTACACTAGGTT---AAAAAACCTGAATATCCAACAGCATGACACCGACTAAAGAAATACTGGCGCACTCTGGAAC-CTTGCACACCACTTATTGGCATGGGAACAATGGGAACACGCCTATACAAAGATGTGCATGGAAATTAGAAGAATGCAACACTGTAGAACAGATGTGACTAGGTGCATGATCAAGAGCACACAAGACCA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 11569 1069 - 30167 AAAAGACTGACCCCCAGTCAGTGTTTTATTTTCCCTGATGACCGCAGGCCATGAACTTATGGAACAATAAGGTAATTAGGCTCTTGGACCCAGGGAAGTAGCTCCATGCCACCTGCCCTCATTCGCTGAGCATTTTGGTTTCTCGGATCTGCTACTCAGTTTCCAGTCTCTTCCTCCCTGCCAATGCTGCCAGCGTGCCTCTTCTGCAAGCAGCAACTGCCTTCCACCTTCCATTCTCTACTCTTTAGCCATCATCTGGCTGGACTTTTCAGAATGGACTGCAAAGGAGAATAAACTGGCTGAGTCTGAGGGTGCACTCACGTGCAAAGTTGCAAGCTTTAATGTACCCATCTTGGCAGATTTTGGCTCCTTAGAGTTCTTTCTCATTTGGGGATCTCATGTGCCCTCTGATGAGGTGGGCTCACTGACTGTCTGCGCTGGTGGCATCTGGCAGCACCTTGTCACGTGCACCTAGGTAAGAACC-TGGCTGCACCTGATGCTTAGCCAAACGGGGAACCCACAGTTCTGTGTATCAGGTGATGTTTAATCTCTGGAGGTTAATGAACGTGAGGGAGAGATACTGTCTGGGACTCTCCACATACTGCGTCTGAGTCACTGAAGGAAAAGAATGTGGGGTCTGTTTGCTGGGACTGGACACCTCCATAATCACATGCTCCATGAAATGCAGGCAGGAGATCTCGCTTTCTACCTCTGGGATGGGAGTGTGCAGTTTCAGAATGAGACTAGCCCACACAACTGACTCTTTATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATATCTTAATCACAAACACTCTTCTGGTTTTTAGAAATGTGAATGTTATTTACACTAAGTT---AAAAAACCTGAATATCCAACAGCATGACACCGACTAAAGAAATACTGGCGCACTCTGGAAC-CTTGCACACCACTTATTGGCATGGGAACAATGGGAACACGCCTATGCAAAGATGTGCATGGAAATTAGAAGAATGCAACACTGTAGAACAGATGTGACTAGGTGCATGATCAAGAGCACACAAGACCA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 51119 1053 + 85365473 AAAAGACTGACCCCCAGTCAGTGTTTTATTTTCCCTGATGACCGCAGGCCATGAACTTATGGAACAATAAGGTAATTAGGCTCTTGGACCCAGGGAAGTAGCTCCATGCCACCTGCCTTCATTTGCTGAGCATTTTGGTTTCTCGGATATGCTACTCAGTTTCCAGTCTCTTCCTCCCTGCCAATGCCGCCAGCGTGCCTCTTCTGCAAGCAGCAACCGCCTTCCACCTTCCATTCTCTACTCTTTAGCCATCATCTGGCTGGACTTTTCAGAATGGACTGCAAAGGAGAATAAACTGGTTGGGTCTGAGGGTGCACTCACGTGCAAAGTTGCAAGCTTTATTCTATCCATCTTGGCAGATTTTGGCTCCTTAGAGTTCTTTCTCATTTGGGGATCTCATGTGCCCTCTGATGAGGTGGGCTCACTGACTGTCTGCACTGGTGGCATCTGGCAGCACCTTGTCACATGCACATAGGTAAGAACC-TGGCTGCACCTGATGCTTAGCCAAAGGCGGAGCCCGCAGTTCTGTGTATCAGGTGATGTTTAATCTCTGGAGGTTAATGAACATGAGGGAGCAATACTGTCTGGGACTGTCCACATATTGCGTCTGAGTCACTGAAGGAAAAGAATGCAGGGTCTGTTTGCTGGAACTGGACACCTCCATAATCACATGCCCCATGAAAGGCAGGC---ACATCTCGCTTTCTACCTCTGGGATGGGAGTGTGCAGTTTCAGAATGAGACTAGCCCACACAACTGACT----ATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATATCTTAATCACAAACACTCTTCTGGTTTTTAGAAATGTGAATGTTATTTATACTAGGTT---AAAAAGCCTGAATATCCAACAGCATGACACCGACTAAAGAAATACTGGCGCACTCTGGAAA-CTTGCAGACCACTTATTGGC---------ATGGGAACACGTCTATGCAAAGATGTGCATGGAAATTAGAAGAATGCAACACTGTAGAACAGATGTGACTAGGTGCATGATCAAGAGCACACAAGACCA i nomLeu3.chr20 C 0 I 104 s rheMac8.chr3 33893984 1024 + 185818997 AAAAGACTGACCCCCAGTCAGTGTTTTATTTTCCCTGACGACCGCAGGGCGTGAACTTACTGAACAAAAAGGTAATTAGGCTCTTGGACCCAGGCAAGTAGCTCCATAGCACCTGCCCTCATTTGTTGAGCATTTTGGTTTCTCAGATCTGCTGCTCAGTTTCCAGTCTCTTCCTCCCTGCCAATGCCACCAACGTGCCTCTCCTTCCAGCACCAACTGCCTTCCACCTTCCATTCTCTGGTCTTTAGCCACGATCTGCCTGGACTTTTCAGAATGGACTGCAAAGGAGAATAAACTGGCTGAGTCTGAGGGTG-ACTCATGTGCAAAGCTGCAAGCTTTGCTGTACCCGTCTTGGCAGCTTTGGGCTCCATAGAGTTCCTTCTCATTTGGGGA------------TCTGACGAGGTGGGCTCGCTGCCTGTCTGCACTGGTGGCATCTGGTAGCACCTTGTCACGTGCACATAGGTAAGCACCGTGGCTGCACCTGACGCTTAGCCAAACGGGGAGCCTGCATTTCTGTGTGTCAGGTGATACGTAACCTCCAGAGGTTAATGAACGTGAGGGAAAGATAATATCTGGGCCTGTCCACATACTGCGTCTGAGTCAGTGAAAGAAAAGAATGTGGGGTCTGTTTGCTGAGACTGGACACCTCCATAATCTCATGCTCCATGAAAGGCAGGCAGGAGGTCTCGCTTTCTACCTCTGGGACATG------------CAGAATAAGACTAGCCCACACAACTGACCCTTTATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATATCTTAATCACAAACACTCTTCTGTTTTTCAGAAATGTGAATGTTATTTATACTAGGTT---AAAAAACCCGAATATCCAACAGCATGACACCGACTAAAGAAA--------CACTCTGGAAC-CTTGCAGACCACTCATTGGCACGGGAACAATGGGAACGTGCCTATGCAAAGATGTGTGTGGAAATTAGAAGAATGCAACACTGTAGGACGGACGTGACT-------------AAAACACACAGGACCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33509912 1024 + 192294377 AAAAGACTGACCCCCAGTCAGTGTTTTATTTTCCCTGACGACCGCAGGGCGTGAACTTACTGAACAAAAAGGTAATTAGGCTCTTGGACCCAGGCAAGTAGCTCCATGGCACCTGCCCTCATTTGTTGAGCATTTTGGTTTCTCAGATCTGCTGCTCAGTTTCCAGTCTCTTCCTCCCTGCCAATGCCACCAACGTGCCTCTCCTTCCAGCACCAACTGCCTTCCACCTTCCATTCTCTAGTCTTTAGCCACGATCTGCCTGGACTTTTCGGAATGGACTGCAAAGGCGAATAAACTGGCTGAGTCTGAGGGTG-ACTCATGTGCAAAGCTGCAAGCTTTGCTGTACCCGTCTTGGCAGCTTTGGGCTCCATAGAGTTCCTTCTCATTTGGGGA------------TCTGACGAGGTGGGCTCGCTGCCTGTCTGCACTGGTGGCATCTGGTAGCACCTTGTCACGTGCACATAGGTAAGCACCGTGGCTGCACCTGACGCTTAGCCAAACAGGGAGCCTGCATTTCTGTGTGTCAGGTGATACGTAACCTCCAGAGGTTAATGAACGTGAGGGAAAGATAATATCTGGGCCTGTCCACATATTGCGTCTGAGTCAGTGAAAGAAAAGAATGTGGGGTCTGTTTGCTGAGACTGGACACCTCCATAATCTCATGCTCCATGAAAGGCAGGCAGGAGGTCTCGCTTTCTACCTCTGGGACATG------------CAGAATAAGACTAGCCCACACAACTGACCCTTTATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATATCTTAATCACAAACACTCTTCTGTTTTTCAGAAATGTGAATGTTATTTATACTAGGTT---AAAAAACCCGAATATCCAACAGCATGACACCGACTAAAGAAA--------CACTCTGGAAC-CTTGCAGACCACTCATTGGCATGGGAACAATGGGAACGTGCCTATGCAAAGATGTGCGTGGAAATTAGAAGAATGCAACACTGTAGGACGGACGTGACT-------------AAAACACACAGGACCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4271690 1024 - 9440265 AAAAGACTGACCCCCAGTCAGTGTTTTATTTTCCCTGACGACTGCAGGGCGTGAACTTACTGAACAAAAAGGTAATTAGGCTCTTGGACCCAGGCAAGTAGCTCCATGGCACCTGCCCTCATTTGTTGAGCATTTTGGTTTCTCAGATCTGCTGCTCAGTTTCCAGTCTCTTCCTCCCTGCCAATGCCACCAACGTGCCTCTCCTTCCAGCACCAACTGCCTTCCACCTTCCATTCTCTAGTCTTTAGCCACGATCTACCTGGACTTTTCGGAATGGACTGCAAAGGAGAATAAACTGGCTGAGTCTGAGGGTG-ACTCATGTGCAAAGCTGCAAGCTTTGCTGTACCCGTCTTGGCAGCTTTGGGCTCCATAGAGTTCCTTCTCATTTGGGGA------------TCTGACGAGGTGGGCTCGCTGCCTGTCTGCACTGGTGGCATCTGGTAGCACCTTGTCACGTGCACATAGGTAAGCACCATGGCTGCACCTGACGCTTAGCCAAACGGGGAGCCTGCATTTCTGTGTGTCAGGTGATACGTAACCTCCAGAGGTTAATGAACGTGAGGGAAAGATAATATCTGGGCCTGTCCACATACTGCGTCTGAGTCAGTGAAAGAAAAGAATGTGGGGTCTGTTTGCTGAGACTGGACACCTCCATAATCTCATGCTCCATGAAAGGCAGGCAGGAGGTCTCGCTTTCTACCTCTGGGACATG------------CAGAATAAGACTAGCCCACACAACTGACCCTTTATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATATCTTAATCACAAACACTCTTCTGTTTTTCAGAAATGTGAATGTTATTTATACTAGGTT---AAAAAACCCGAATATCCAACAGCATGACACCGACTAAAGAAA--------CACTCTGGAAC-CTTGCAGACCACTCATTGGCACGGGAACAATGGGAACGTGCCTATGCAAAGATGTGCGTGGAAATTAGAAGAATGCAACACTGTAGGACGGACGTGACT-------------AAAACACACAGGACCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16860633 1024 - 21915920 AAAAGACTGACCCCCAGTCAGTGTTTTATTTTCCCTGACGACCGCAGGGCATGAACTTACTGAACAAAAAGGTAATTAGGCTCTTGGACCCAGGCAAGTAGCTCCATGGCACCTGCCCTCATTTGTTGAGCATTTTGGTTTCTCAGATCTGCTGCTCAGTTTCCAGTCTCTTCCTCCCTGCCAATGCCACCAACGTGCCTCTCCTTCCAGCACCAACTGCCTTCCACCTTCCATTCTCTAGTCTTTAGCCACAATCTGCCTGGACTTTTCGGAATGGACTACAAAGGAGAATAAACTGGCTGAGTCTGAGGGTG-ACTCACGTGCAAAGCTGCAAGCTTTGCTGTACCCATCTTGGCAGCTTTGGGCTCCATAGAGTTCCTTCTCATTTGGGGA------------TCTGACGAGGTGGGCTCGCTGCCTATCTGCGCTGGTGGCATCTGGTAGCACCTTGTCACGTGCACATAGGTAAGCACCGTGGCTGCACCTGACGCTTAGCCAAACGGGGAGCCTGCATTTCTGTGTGTCAGGTGATACGTAACCTCCGGAGGTTAATGAACGTGAGGGAAAGATAATATCTGGGCCTGTCCACATATTGCATCTGAGTCAGTGAAGGAAAAGAATGTGGGGTCTGTTTGCTGAGACTGGACACCTCCATAATCTCATGCTCCATGAAAGGCAGGCAGGAGGTCTTGCTTTCTACCTCTGGGACGTG------------CAGAATAAGACTAGCCCACACAACTGACCCTTTATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATATCTTAATCACAAACACTCTTCTGTTTTTCAGAAATGTGAATGTTATTTATACTATGTT---AAAAAACCCGAATATCCAACAGCATGACACCGACTAAAGAAA--------CACTCTGGAAC-CTTGCAGACCACTCATTGGCACGGGAACAATGGGAACATGCCTATGCAAAGATGTGCGTGGAAATTAGAAGAATGCAACACTATAGGACGGACGTGACT-------------AAAACACACAGGACTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 956 1024 - 21531802 AAAAGACTGACCACCAGTCAATGTTTTATTTTCCCTGATGACTGCAGGGCGTGAACTTATGGAACAAAAAGGTAATTAGGCTCTTGGACCCAGGCAAGTATCTCCATGGCACCTGCCCTCATTTGTTGAGCATTTTGGTTTCTCAGACCTGCTGCTCAGTTTCCACTCTCTTCCTCCCTGCCAATGCCACCAGCGTGCCTCTCCTTCCAGCACCAACTGCCTTCCACCTTCCATTCTCTAGTCTTTAGCCACAATCTGCCTGGACTTTTCAGAACGGACTGCAAAGGAGAATAAACTAGCTGAGTCTGAGGGTG-ACTCACGTGCAAAGCTGCAAGCTTTGCTGTACCCGTCTTGGCAGCTTTGGGCTCCATAGAGTTCCTTCTCATTTGGGGA------------TCTGATGAGGTCGGCTCGCTGTCTGTCAGTGCTGGTGGCATCTGGTAGCACCTTGTCACGTGCACATAGTTAAGCACCGTGGCTGCACCTGATGCTTAGCCAAATGGGGAGCCTGCATTTCTGTGTGTCAGGTGATACGTAACCTCCGGAGGTTAATGAACGTGAGGGAAAGATAATATCTGGGCCTGTCCACATATTGCGTCTGAGTCAGTGAAGGAAATGAATGTGGGGTCTGTTTGCTGAGACTGGACACCTCCATAATCTCATGCTCCATGAAAGGCAGGCAGGAGGTCTCGCTTTCTACCTCTGGGATGTG------------CAGAATAAGACTAGCCCACACAACTGACCCTTTATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATATCTTAATCACAAACACTCTTCTGTTTTTCAGAAATGTGAATGTTATTTATACTAGGTT---AAAAAACCCGAATATCCAACAGCATGACACCGACTAAAGAAA--------CACTCTGGAAC-CTTGCAGACCACTCATTGGCATGGGAACAATGGGAACGTGCCTATGCAAAGATGTGTGTAGAAATTAGAAGAATGCAACACTGTAGGACAGATGTGACT-------------AGACCACAAAGGACCG i chlSab2.chr28 N 0 C 0 s manLeu1.NW_012101810v1 17401 1024 - 2515279 AAAAGACTGACCCCCAGTCAGTGTTTCATTTTCCCTGATGACCGCAGGGCGTGAACTTACTGAACAAAAAGGTAATTAGGCTCTTGGACCCAGGCAAGTAGCTCCATGGCACCTGCCCTCATTTGTTGAGCATTTTGGTTTCTCAGATCTGCTGCTCAGTTTCCAGTCTCTTCCTCCCTGCCAATGCCACCAACGTGCCTCTCCTTCCAGCACCAACTGCCTTCCACCTTCCATTCTCTAGTCTTTAGCCACGATCTGCCTGGACTTTTCGGAATGGACTGCAAAGGAGAATAAACTGGCTGAGTCTGAGGGTG-ACTCACGTGCAAAGCTGCAAGCTTTGCTGTACCCATCTTGGCAGCTTTGGGCTCCATAGAGTTCCTTCTCATTTGGGGA------------TCTGACGAGGTGGGCTCGCTGCCTGTCTGCGCTGGTGGCATCTGGTAGCACCTTGTCACGTGCACATAGGTAAGCACCGTGGCTGCACCTGACGCTTAGCCAAACGGGGAGCCTGCATTTCTGTGTGTCAGGTGATACGTAACCTCCAGAGGTTAATGAACGTGAGGGAAAGATAATATCTGGGCCTGTCCACATATTGCGTCTGAGTCAGTGAAGGAAAAGAATGTGGGGTCTGTTTGCTGAGACTGGACACCTCCATAATCTCATGCTCCATGAAAGGCAGGCAGGAGGTCTTGCTTTCTACCTCTGGGACGTG------------CAGAATAAGACTAGCCCACACAACTGACCCTTTATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATTCACTAAGATGATATCTTAATCACAAACACTCTTCTGTTTTTCAGAAATGTGAATGTTATTTATACTAGGTT---AAAAAACCCAAATATCCAACAGCATGACACCGACTAAAGAAA--------CACTCTGGAAC-CTTGCAGACCACTCATTGGCACGGGAACAATGGGAACGTGACTATGCAAAGATGTGCGTGGAAATTAGAAGAATGCAACACTGTAGGACAGATGTGACT-------------AAAACACACAGGACCG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr8 91763899 1055 - 128169293 AAAACACTGACCCCCAGACAATGTTTTATTTTCCTTGATGACCGCAGGCCATAAACTCATGGAACAATAAAGTTATTAGGCTCTTGGACCTAAGGAAGTAGCTCCATGGCACCTGTCCTCCTTTGCTGGACATTTTGGTTTCTCAGATGTGCCACTCAGTTTCCAGCCTCTTCCTCCCTGACAATGCTGCCAGCATGCCTCTCCAGCAAGCAGCAGTGGCCTTGCATATTCCATTCTCTACTCTTTAGCCATCATATGGCTGGACTTTTCATAACAGACTGCAAAGGAGAATAACCTGGGTGAGTGTGAGGATGCACTCACATGCAAAGTTACAAGCTTTACTGTACCCAACTTGGCAGATTTTGGCTCCTCAGAGTTCCTTCTCATTTGGGGATCTGATTCGCCCTCTGATAAGGTGGACTCGCTGACCATCTGGGATGGTAGCATCTGGAAGCACCTTGTCATGTGCACATAGGTAAGGATC----CTGCACCTGACACTTGACCAAATGGGGAGCCTGCAGTTCTATGTATCAGGTGATATTTAATCTCTAGATGTTAATGAATGTGAGGGAGAGATACCACCTGGGCCTGGCCACATATTGCATCTAAGTCACTGAGGGAAAAGAATATGGGGTCTCTTTGCTGGGACTGGACACCTCCATAATTACATGC-TCATGAAAGGCAGCCGGGAGGTCTCATTTTCTACCTCTGGGATGTGAGTGTGTTGTTTCAGAATGAGAATAGCCCACACAACTGACCCTTTATTTGTCAAACAGGAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATGTCTTAATCAC--ATACTCTTCCATTTTTTAGAAATGTTAATGTTATTTATACTAGGTT--AAAAAAACTTGAATATCCAACAGCATGGCACTGACTGAAGAAATACTGGCACACACTGGAATTCTTGCAGACCACTTACTGGG---------ATGGGAACATGCCTATGCAAAG-TGTGCATGGAAATTAGAAGAATGCAACTTCGTGGAACAGACGAGACTAGGTGCATCATGAAGAACACAGAAGACTG i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 87219 1059 + 223797 AAAACACTGACCCCCAGTCAATGTTTTATTTTCCTTGATGACTGCAGGCCATAAACTCATGGGACAATAAAGTAATTAGTTTCTTGGATCTAAGGAAGTAGCTCCATGGCACCTGTCCTCATTTGCTGGACATTTTGGTTTCTCAGATGTGCTACTCAGTTTCCAGCCTCTTCCTCCCTGATGATGCTGCCAGCGTGCCTCTCCTGCAAGCAGCAGGAGCCTTGCATATTCCATTCTCTACTGTTTAGCCATCATATGGCTGGACTTTTCATGACAGACTGCAAAGGAGAATAACCTGGCTGAGTCTGAGGATGCACTCACATGCAAAGTTGCAAGCCTTAGTCTACCCAACTTGGCAGATTTTGGTTCCTCAGAGTTCTTTCTCGTTTGGGGATCTGATGTGCCCTCTGATAAGGTGGACTCACTGACTTTCTGGGCTGGTAGCATCTGGAAGCACCTTGTCAGGTGCACATAGGTAAGGACA----CTGCACCTGATGCTTCACCAAATGGGGAGTCTGCAGTTCTATGTATCAGGTGATATTTAACCTCCAGATGTTAATGAATGTGAAGGAGAGATACTGTCTGGGCCTGACCACATATTGCGTCTGAGTCACTGAGGAAAAAGAATGTGAGGTCTCTTTGCTGGGACTGGACACCTCCATAATTACATGCTTCATGAAAGGCAGGCAGGAATTCTCATTTTCTACCTCTGGGATGTGAGTGTGTTGTTTCAGAATGAGCATAGCCCACACAACTGACCCTTTATTTGTCAAAGAGGAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATGTCTTAATCAC--ACACTCTTCCATTTTTTAGAAGTGTTAATGTTATTTTTACTAGGTTAAAAAAAAACTTGAATATCCAACAGCATGGCACTGACTGAAGAAATACTGGCACACACTGGAACTCTTGCAGACCACTTGCTGGG---------ATGGGAACATGCCTATGCAAAGATGTGCATGGAAATTAGAAGAATGCAACATCGTGGAATAGATGAGACTAGGTGCATGATGAAGAACACAGAAGACTG i saiBol1.JH378358 C 0 C 0 s cebCap1.NW_016107703v1 375565 1054 - 2125214 GAAAGACTGACCCCCAGTCAATGTTTCAGTTGCCTTGATGACTGCAAGCCATGAACTCGTGGAACAATAAAGTAATCAGGCTCTTGGACCCAGGGAAGTAGCTCCATGCTACCCACCCTTATTTGCTGGGCATTTTGGTTTCTCAGATCTGCTGCTCTGTTTCCATCCTCTTCCTCCCTGCCAATGCTGCCAACATGCCTCTCCTGCAAGCAGCAACTGCCTTCCATCTTCCATTCTCTACTCTTCAGCCATCATCTGGCTGGACTTTTCAGAACAGACTGCAAAGGAGAATAACCTGGCTGAGTC------TGCACTCACATGCAAAGTTGCAAGCTTTACTGTACCCATCTTGGCAGATGTTGGCTCCTAGGAGGGCTTTCTCATTTGGGGATCTGATGTGCCCTCTGATGAGGTGGGCTTGCTGACTGTCTGGGCTGGTGGCATCTAGCAGCACCTCGTCACTTGCACATAGGTAAGCACCATGGCTGCACTCGATGCTTTGCCAGATGGGGACCCCACAGTTCTATGTATCAGGTGATCTTTAATCTCTGGAGGTTTAAGAATGTGAGGGAGGGATACTATCTGGG-CTGGCCACATACTGCATCTGAGTCAGTGAGGGAAAAGAATGCGGGGCCTGTTTGCTGGGACTGGAAACCTCCATAATCACATGCTCCGTGAAAGGCAGGCAGGAGGTCTCATTTTCTATCTCTGGAATGTGAGTGTGCAGTTTCAGAATGAGAATAGTCCACACAACTTACTCTTTCTTTGGAAAAGATAAACAAAATCAGATGCAGCAATTTGATATCCACTAAGATAGCATCTTAATCACAAACACTCTTCTGTTCTTAAGCAATGTTCATGTTATCTATACTAGGTT---AAAAAATCTGAATATCCAACAGCATGGCACTGACTGAAGAAATACTGGTGCACTCTGGAACCCTTGCAGACCACTAATTGGC---------ATGGGAACATGCCTATGCAAAGATGTGTATGGAAATTAAAAGAATACAACATAGTGGAACAGATGTGACGAGGTGCATGATCAACAGC-CACAAGACTG i cebCap1.NW_016107703v1 C 0 C 0 a score=54485.000000 s hg38.chr3_KI270784v1_alt 79640 15 + 184404 AGCCTGCCTCTGCAC s panTro5.chrUn_NW_015975002v1 7601 15 + 14113 AGCCTGCCTCTGCAC i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 12638 15 - 30167 AGCCTGCCTCTGCAC i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 52276 15 + 85365473 CGCCTGCCTCTGCAC i nomLeu3.chr20 I 104 C 0 s rheMac8.chr3 33895008 15 + 185818997 CGTCTGCCTCTGCAC i rheMac8.chr3 C 0 I 69 s macFas5.chr3 33510936 15 + 192294377 CGTCTGCCTCTGCAC i macFas5.chr3 C 0 I 33 s macNem1.NW_012019910v1 4272714 15 - 9440265 CGTCTGCCTCTGCAC i macNem1.NW_012019910v1 C 0 I 69 s cerAty1.NW_012002954v1 16861657 15 - 21915920 CGTCTGCCTCTGCAC i cerAty1.NW_012002954v1 C 0 I 69 s chlSab2.chr28 1980 15 - 21531802 CGTCTGCCGCTGCAC i chlSab2.chr28 C 0 I 33 s manLeu1.NW_012101810v1 18425 15 - 2515279 CGTCTGCCTCTGCAC i manLeu1.NW_012101810v1 C 0 I 69 s calJac3.chr8 91764954 8 - 128169293 CATCTGCC------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 88278 8 + 223797 CACCTGCC------- i saiBol1.JH378358 C 0 C 0 s cebCap1.NW_016107703v1 376619 8 - 2125214 CTCCTGCC------- i cebCap1.NW_016107703v1 C 0 C 0 a score=45039.000000 s hg38.chr3_KI270784v1_alt 79655 37 + 184404 ACACAAGACAGCGCCTGAGTCTGCACCACATGACGGG s panTro5.chrUn_NW_015975002v1 7616 37 + 14113 ACACAAGACCGCGCCTGAGTCTGCACCACGTGACGGG i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 12653 37 - 30167 ACACAAGACCGCGCCTGAGTCTGCACCACGTGACGGG i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 52291 37 + 85365473 ACACAAGACCGCACCTGCCTCTGCACCACGTGACGGG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33510984 36 + 192294377 ACACAAGACTCTGTCTGCCTCTACTCCCCGTGATGG- i macFas5.chr3 I 33 C 0 s chlSab2.chr28 2028 36 - 21531802 ACACAAGACTGCGTCTGCCTCTACACCCCGTGACGG- i chlSab2.chr28 I 33 C 0 s calJac3.chr8 91764962 18 - 128169293 -------------------TCTGCACAATGTGACGAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 88286 18 + 223797 -------------------TCTGCACCATGTGACAAG i saiBol1.JH378358 C 0 C 0 s cebCap1.NW_016107703v1 376627 18 - 2125214 -------------------TCTGCTCCACATGACAAG i cebCap1.NW_016107703v1 C 0 C 0 e cerAty1.NW_012002954v1 16861672 69 - 21915920 I e rheMac8.chr3 33895023 69 + 185818997 I e manLeu1.NW_012101810v1 18440 69 - 2515279 I e macNem1.NW_012019910v1 4272729 69 - 9440265 I a score=334189.000000 s hg38.chr3_KI270784v1_alt 79692 65 + 184404 ACCACTGTGGAGCAAGCCTGGGAG---------ATTCTGATGTAGGCAGCAGAGGCGTCACTTAGGGACCAGAC s panTro5.chrUn_NW_015975002v1 7653 65 + 14113 ACCATTGTGGAGCAAGCCTGGGAG---------ATTCTGATGTAGGCAGCAGAGGCGTCACTTAGGGACCAGAC i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 12690 65 - 30167 ACCATTGTGGAGCAAGCCGGGGAG---------ATTTTGATGTAGGCAGCAGAGGCGTCACTTAGGGACCAGAC i gorGor5.CYUI01004482v1 C 0 N 0 s nomLeu3.chr20 52328 36 + 85365473 ACCATTGAGGAGCAAGTCTGGGGG--------------------------------------TAGGGACCAGGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33895092 65 + 185818997 ACTGTTGTGGAACAAGCCCAGGGG---------ATTCTGGTGAGGGCAGCAGTGGCGTCACTTAGGGACCAGGC i rheMac8.chr3 I 69 C 0 s macFas5.chr3 33511020 65 + 192294377 ACCATTGTGGAACAAGCCCAGGGG---------ATTCTGGCGAGGGCAGCAGTGGCGTCACTTAGGGACCAGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4272798 65 - 9440265 ACCGTTGCGGAACAAGCCCAGGGG---------ATTCTGGTGAGGGCAGCAGTGGCGTCACTTAGGGACCAGGC i macNem1.NW_012019910v1 I 69 C 0 s cerAty1.NW_012002954v1 16861741 65 - 21915920 ACCATTGTGGAACAAGCCCAGGGG---------ATTCTGGTGAGGGCAGCAGTGGCGTCACTTAGGGACCAGGC i cerAty1.NW_012002954v1 I 69 C 0 s chlSab2.chr28 2064 65 - 21531802 ACCGTTGTGGAACAAGCCCGGGGG---------ATTCTGGTGAGGGCAGCAGTGGCGTCACTTAGGGACTAGGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 18509 65 - 2515279 ACCGTTGTGGAATAAGCCCAGGGG---------ATTCTGGTGAGGGCAGCAGTGGCGTCACTTAGGAACCAGGC i manLeu1.NW_012101810v1 I 69 C 0 s calJac3.chr8 91764980 74 - 128169293 AACATTGTGGAGCAAGCCTGTGGGCTGGTTCAGATTCTGATGTAGGCAGCAGTGGCGTCATTTAGGGACCAGGC i calJac3.chr8 C 0 C 0 s saiBol1.JH378358 88304 74 + 223797 AACAGTGTGGAGCAAGCCTGTGGGCTGGTGCAGATTCTGATGTAGGCAGCAGTGGCGTCACTTAGGGACCAGGC i saiBol1.JH378358 C 0 C 0 s cebCap1.NW_016107703v1 376645 74 - 2125214 ACCATTGTGGAGCAAGCCTGGGGGATGGCTCAGATTCTGATGTAGGCAGCCGTGATGTCACTTAGGGACCAGGT i cebCap1.NW_016107703v1 C 0 C 0 a score=199024.000000 s hg38.chr3_KI270784v1_alt 79757 43 + 184404 TTCCGTGGG-AAACCACCATCTCCTTCCAACCCAGATGCGCTTC s panTro5.chrUn_NW_015975002v1 7718 43 + 14113 TTCCGTGGG-AAACCACCATCTCCTTCCAACCCAGATGCACTTC i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 52364 43 + 85365473 TTCCGTGGG-AAACCACCATCTCCTTCCCACCTAGATGCACTTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33895157 42 + 185818997 TCCCGTGGG-AATCC-CCATCTCCTTCCAACCTAGATGCACTTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33511085 42 + 192294377 TCCCGTGGG-AATCC-CCATCTCCTTCCAACCTAGATGCACTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4272863 42 - 9440265 TCCCGTGGG-AATCC-CCATCTCCTTCCAACCTAGATGCACTTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16861806 42 - 21915920 TTCCGTGGG-AATCC-CCATCTCCTTCCAACCTAGATGCACTTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 2129 42 - 21531802 TTCCGTGGG-AATCC-CCATCTCCTTCCAACCTAGATACACTTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 18574 42 - 2515279 TTCCGTGGG-AATCC-CCATCTCCTTCCAACCTAGATGCACTTC i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr8 91765054 43 - 128169293 TTCCATGGGTAACCC-CCATCTCCTCCCAACCCAGGTGCAATTC i calJac3.chr8 C 0 N 0 s saiBol1.JH378358 88378 43 + 223797 TTCCACAGGTAACCC-CCATCTCCTCCCAACCCAGGTGCACTTC i saiBol1.JH378358 C 0 C 0 s cebCap1.NW_016107703v1 376719 43 - 2125214 TTCCACAGGTAAGCC-CCACCTCCTCCAAACCTAGATGTGCTTC i cebCap1.NW_016107703v1 C 0 C 0 a score=1459008.000000 s hg38.chr3_KI270784v1_alt 79800 339 + 184404 ATGGCAAACGCGAGCAGATGAAGGTCATGTAGGAGACGAAAGAACTCGCTCCCCAAGCCCGTAGGCCTTTGTCCTCCACCCATGGACCGAAGCATCTTGTTAGATGAGGGCCGCCCGCAGCCAGAGCCGGCGG-AGAACCTGCCACGGAGCAGGTGTCCGTAAAGAACTGCTGACTGTCACTGTCCCTACTTGGGGGCCACTGGGGGATCTGATGCATCTCACTACCCTTTGTAAAGGAATTATTGAAAATGTCAGCCCTCTAACAAGGCATAGGTTGATTAGTTACAGGATTTAACATTTCTATTTTAAAAGGCAGCATTGAAGAACGTCTTTACAAAG s panTro5.chrUn_NW_015975002v1 7761 339 + 14113 GTGGGAAACGCGAGCAGATGAAGGTCATGTAGGAGACGAAAGAACTCGCTCCCCAAGCCCATAGGCCTTTGTCCTCCACCCATGGACCGAAGCATCTTGTTAGATGACGGCCGCCCGCAGCCAGGGCCGGCGG-AGAACCTGCCATGGAGCAGAGGTCCGTAAAGAACTGCTGACTGTCACTGTCCCTACTTGGGGGCCACTGGGGGATCTGATGCATCTCACTACCCTTTGTAAAGGAATTATTGAAAATGTCAGCCCTCTAACAAGGCATAGGTTGATTAGTTACAGGATTTAACATTTCTATTTTAAAAGGCAGCATTGAAGAATGTCTTTACAAAG i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 52407 339 + 85365473 ATGGGAAAGGAGAGCAGATGAAGGTCACGTAGGAGACGGAAGACCGTGCTCCCCAAGCCCACAGGCCTTTGTCCTCCACCCATAGACCGAAGCATCTTGTTAGATGAGGGCCACCCGCAGCCAGGGCTGGAGG-AGGACCTGCCACAGAGCAGGTGTCCGTAAAGAGCTGCTGACCGTCACTGTCCCTACCTGGGGGCCACTGGGGGATCTGACGCATCTCACTGCCCTTTGTAAAGGAGTTATTGAAGACATCAGCCCTCTAACAAGGCATAGGTTGGTTAGTTACAGGATTTAACATTTCTATTTTAAAAGGCAGCATTGAACAGTGTCTTTACAAAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33895199 339 + 185818997 ATGGGAAAGGTGAGCAGGTGAAGGTCATGTAGGAGACGGAAGAACTCACTCCCCAAGCCCGTAGGCCTTTGTCCTCCACCCATGGACAGAAGCATCTTGTTAGATGAGGGCTGCCCACAGCCAGGGCTGCAGG-AGAACCTGCCACGGAGCGAGTGTAAGTAAAGAACCACTGACTGTCACCGTCCCTACTTGGGGGCCGCTGAGAGATCTGACACGTCTCACTGCCCTTCGTAAAGTAATTATTGGAAAAGTCAGTCCTCCAACAAGGCATAGGTTGGTTAGTTACAGGATTTGACGTTTGTATTTTAAAAGGCAGCATTGAAGAGTGTCTTTATAAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33511127 339 + 192294377 ATGGGAAAGGTGAGCAGGTGAAGGTCATGTAGGAGACGGAAGAACTCACTCCCCAAGCCCGTAGGCCTTTGTCCTCCACCCATGGACAGAAGCATCTTGTTAGATGAGGGCTGCCCACAGCCAGGGCTGCAGG-AGAACCTGCCACGGAGCGAGTGTCAGTAAAGAACCGCTGACTGTCACCGTCCCTACTTGGGGGCCGCTGAGAGATCTGACACGTCTCACTGCCCTTCGTAAAGTAATTATTGGAAAAGTCAGTCCTCCAACAAGGCATAGGTTGGTTAGTTACAGGATTTGACGTTTGTATTTTAAAAGGCAGCATTGAAGAGTGTCTTTATAAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4272905 339 - 9440265 ATGGGAAAGGTGAGCAGGTGAAGGTCATGTAGGAGACGGAAGAACTCACTCCCCAAGCCCGTAGGCCTTTGTCCTCCACCCATGGACAGAAGCATCTTGTTAGATGAGGGCTGCCCACAGCCAGGGCTGCAGG-AGAACCTGCCACGGAGCGAGTGTCAGTAAAGAACCGCTGACTGTCACCGTCCCTACTTGGGGGCCGCTGAGAGATCTGACACGTCTCACTGCCCTTCGTAAAGTAATTATTGGAAAAGTCAGTCCTCCAACAAGGCATAGGTTGGTTAGTTACAGGATTTGACGTTTGTATTTTAAAAGGCAGCATTGAAGAGTGTCTTTATAAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16861848 339 - 21915920 ATGGGAAAGGTGAGCAGGTGAAGGTCATGTAGGAGACGGAAGAACTCACTCCCCAAGCCCGTAGGCCTTTGTCCTCCACCCATGGACAGAAGCATCTTGTTAGATGAGGGCTGCCTACAGCCAGGGCTGCAGG-AGAACCTGCCACGGAGCGAGTGTCAGTAAAGAACCGCTGACTGTCACCGTCCCTACTTGGGGGCCGCTGGGAGATCTGACGCGTCTCACTGCCCTTCGTAAAGTAATTGTTGGAAAAGTCAGTCCTCCAACAAGGCATAGGTTGGTTAGTTACAGGATTTGACGTTTGTATTTTAAAAGGCAGCATTGAAGAGTGTCTTTATAAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 2171 339 - 21531802 ATGGGAAAGGTGAGCAGGTGAAGGTCATGTAGGAGACGGAAGAACTCTCTCCCCAAGCCCGTAGGCCTTTGTCCTCCACCCATGGACAGAAGTATCTTGTTAGATGAGGGCTGCCCACAACCAGGGCTGCAGG-AGAACCTGCCACGGAGTGAGTGTCAGTAAAGAACCGCTGGCTGTCACCATCCCTACTTGGGGGCCACTGGGAGATCTGACGTGTCTCACTGCCCTTCGTAAAGTCATTGTTGGAAAAGTCAGTCCTCCAACAAGGCGTAGTTTGGTTAGTTACAGCATTTGACGTTTGTATTTTAAAAGGCAGCATTGGAGAGTGTCTTTATAAAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 18616 339 - 2515279 ATGGGAAAGGTGAGCAGGTGAAGGTCATGTAGGAGACGGAAGAACTCACTCCCCAAGCCCGTAGGCCTTTGTCCTCCACCCATGGACAGAAGCATCTTGTTAGATGAGGGCTGCCCACAGCCAGGGCTGCAGG-AGAACCTGCCACGGAGCGAGTGTCAGTAAAGAACCGCTGACTGTCACCGTCCCTACTTGGGGGCTGCTGGGAGATCTGACGCATCTCACTGCCCTTCGTAAAGTAATTGTTGGAAAAGTCAGTCCTCCAACAAGGCATAGGTTGGTTAGTTACAGGATTTGACGTTTGTATTTTAAAAGGCAGCATTGAAGAGTGTCTTTATAAAG i manLeu1.NW_012101810v1 C 0 C 0 s saiBol1.JH378358 88421 335 + 223797 CTGGGAAAGGCAAGCAGATGAAGTTCATGTAG---ATGAAGGAACTCATTCCTCAAGCCCGTAGGCTTTTGTCTGCTGCCTATGGACATAGGCATCTAATCAGATAGGGGTCACCCACAGCAAGGGCTGGAGG-AGAACCTGCCATGGAGTGGGTGTCGGTAAAGAACTGCTGACTGTCGCTGTCCCTACTTGGAGGCCAGTGGGGGATCTGACACATCTCA-TGTCCTTGGTAAAGTAATTACTAAAAATGTCAGCCCTCCAACAAGGCATAGGTTGATTAGTTATAGCATTTAACATTTCTATTTTAAATGACAGCATTGAAAAGCATCTTTGTAAAG i saiBol1.JH378358 C 0 N 0 s cebCap1.NW_016107703v1 376762 339 - 2125214 CTGGGAAAGGCGAGAAGATGAAGGTCGTGTAGGACACGAAAGAACTTGCTCCCCAAGCCCATAGGCCTTTGTCTTCCACCCATGGACCGAAGCACCTTGTTAGATGGGGGCTGCCCACAGCCAGGGCTGGGGGAAGAACCTGCCATGGAGCAGGTATCAGTAAATGACTGCTGACTGTCACTGTTCCTACTTGGGGGCCAGTGGGAGATCAGACACATCTCACTCCCCTTTGTAAAGTGATTATTGAAAACGTCAGCTGTCTAACAAGGCATAGGTTGCTTAGTTATATAATTTAACATTTCTATTTTAAAAGGCAGCCTTGAAGAGTGTCTTT-TAAAG i cebCap1.NW_016107703v1 C 0 C 0 a score=5856936.000000 s hg38.chr3_KI270784v1_alt 80139 1673 + 184404 GCTGTACAAAACCTGCCATATTCTTTGTCACACAGATTGACTCATGTGCAATGCAGCCATTTGATGAAACACTGGCATTTACCAGATGTAAACTTATTAGCAGACGACAACTAGAAATAGTGTGCTGGATGTGCCCGTTTATTTAT----------ATGAATATAACCATCTCTCTAGATGCATCGAAAGATACACAACATGAGAT-CCACTTTATTTCTACAAGTTTATGATCAGGTGGTCAGGACAGGGAAAGAAGAGGAAAAAACTTTAAATCATGGACCTTTATTCTTAGACACCTTTATCCTACATACACAAGGGACATGCATGGTTGAAATAACGGAAACAAG-TGGATAAAAGTGAAAGTAACTTAAACAGCTTTACCCAGGAATGCCCAATTCAGGTGCTGCAGAGAAGAGCATGAGAACCGGGTGTCTTCAGGACAGGTGTGCATCTGGGAGCAGAGTGGGCGTTCATCAGCAGGGAGGAGAAAGGCCTGGGTCGGGGGACACTGGGGCTGCTGTCCCAGAGGCTGGCAGTGTAGCTCTGAACCCCCAAGACTTCACTGAGTCTCCCCTCAACCACCTAAACCAGAATAAACTGATGTAGCAGGACTCCTCAAACACTGTGCAGGGTCTCCATGTCCTCGATGGCCCCTGATGAGCCACAGTACCCTCAGGTCCTGGTGAAGGAGCTGGTGCTGCCTCCTGCCTTTCCCCACATGGGGTCCTGCAGCTCATCCCACACAGCCTCAGATTCCCTCTACAGAACCTGCCCACAGATGTCTTCCGAGACCGGCAATACTGGGAGGCCTGTGGCCC-AGACCCAGGAGGAACCAGCTGAGAGGCTCCGTGGAGGTATCGCTGATGGTGTAACCAGAATGAAAATGCCCACTTCTGTTCTGCTCCCTGAGAACAACTGTCAAGCCAGCATGAGTTTCCAGTTGGAACTATTCCTTTTCTCCCCATGTTTGTCGCTGTTTTAATGGACATTGCCTGGCTATTAAATCCCCCGATGAACTCACTTTGAAAATTATCTATTGCACTGGGCACCCTTTCAGGAATCACTGAGTGTTAA-TTTTCTCAGTCTGAGTGATAATTTATGAGTCAAACAAGGACAGATCTGAAGCCAGAGGCTGCTCCTGTTGGGAAATCCCTGAGGATGATGTTCCAGGGAAGCCTCCAGCCTTGGGAGTCCCGTGGAACTGAGCCAGCCCAGGTCATGAAGGGAGCTGGTGCCAGACACTGACT---GGGGACCTGCTGGCCTCTGGGCAGACCGCTCTGTCCCTGCACCTGGCCTGCCAGGTATCcctgtgcagtcataccaagtcctgtgctcagaagggccccagagtagtttaaagctctgctgccgcc-cctggaagctcatgattttgaacaacaacaacaaaaaaaaacccacgttttccactcggccccacacattatgtggccTGCGCAGCTGTCAGGCTGTGGCCACAGTGCTGGCATCTCTCACACAATGAAGGCTGCTGGAGTCCTGGCTGGCTTGTTTTGACTCTTTTGTGAGGCCCACACCTAAGCTAAACACTCACGTGCCCCC-ACGCTGACTCCCCACACTCTAAAGCATGAATCTGCCCCTTCAGCTGGGAGAGGGTCCTCGTGTCATCTGGGTTTTTGGAGAGAAGGTCAAGGGAGCCTGGGTTC s panTro5.chrUn_NW_015975002v1 8100 1673 + 14113 GCTGTACAAAACCTGCCATATTCTTTGTCACACAGATTGACTCATGTGCAATGCAGCCATTTAATGAAACACTGGCATTTACCAGATGTAAACTTATTAGCAGACGACAACTAGAAATAATGTGCTGGATGTGCCCGTTTATTTAT----------ATGAATATAACCATCTCTCTAGATGCATCGAAAGATACACAACATGAGAT-CCACTTTATTTCTACAAGTTTATGATCAGGTGGTCAGGACAGGGAAAGAAGAGGAAAAAACTTTAAATCATGGACCTTTATTCTTAGACACCTTTATCCTACATACACAAGGGACATGCATGGTTGAAATAATGGAAACAAGGTGGATAAAAGTGAAAGTAACTTAAACTGCTTTACCCAGGAATGCCCAATTCAGGTGCTGCAGAGAAGAGCATGAGAACCGGGTGTCTTCAGGACAGGTGTGCCTCTAGGAGCAGAGTGGCCATTCATCAGCAGGGAGGAGCAAGGCCTGGGTCGGGGGACACTGGGGCTGCTGTCCCAGAGGCTGGCAGCGTAGCCCTGAACCCCCAAGGCTTCACTGAGTCTCCCCTCAACCACCTAAACCAGAATAAACTGATGTAGCAGGACTCCTCAAACACTGTGCAGGGTCTCCATGTCCTCGATGGCCCCTGATGAGCCACAGTACCCTCAGGTCCTGGTGAAGGAGCTGGTGCTGCCTCCTGCCTTTCCCCACGTGGGGTCCTGCAGCTCATCCCACACAGCCTCAGATTCCCTCTACAGAACCTGCCCACAGATGTCTTCCGAGACCGGCAATACTGGGAGGCCTGTGGCCC-AGACCCAGGAGGAACCAGCTGAGAGGCTCCGTGGAGGTATCGCTGATGGTGTAACCAGAATGAAAATGCCCACTTCTGTTCTGCTCCCTGAGAACAACTGTCAAGCCAGCATGAGTTTCCAGTCGGAACTTTTCCTTTTCTCCCCATGTTTGTCGCTGTTTTAATGGACATTGCCTGGCTATTAAATCCCCCGATGAACTCACTTTGAAAATTATCTATTGCACTGGGCACCCTTTCAGGAATCACTGAGTGTTAA-TTTTCTCAGTCTGAGTGATAATTTATGAGTCAAACAAGGACAGATCTGAAGCCAGAGGCTGCTCCTGTTGGGAAATCCCTGAGGATGATGTTCCGGGGAAGCCTCCAGCCTTGGGAGTCCCGTGGAACTGAGCCAGCCCAGGTCATGAAGGGAGCTGGTGCCAGACACTGACT---GGGGACCTGCTGGCCTCTGGGCAGACCGCTCTGTCCCTGCACCTGGCCTGCCAAGTATCcctgtgcagtcataccaagtcctgtgctcagaagggccccagagtagtttaaagttctgctgccgcc-cctggaagctcatgattttgaacaacaacaacaaaaaaaa-cccacgttttccactcggccccacacattatgtggccTGCGCAGCTGTCAGGCTGTGGCCACAGTGCTGGCATCTCTCACACAATGAAGGCTGCTGGAGTCCTGGCTGACTTGTTTTGACTCTTTTGTGAGGCCCACACCTAAGCTAAACACTCACGTGCCCCC-ACGCTGACTCCCCACACTCTAAAGCATGAATCTGCCCCTTCAGCTGGGAGAGGGTCCTCGTGTCATCTGGGTTTTCGGAGAGAAGGTCAAAGGAGCCTGGGTTC i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 52746 1672 + 85365473 GATGTATAAAATCTGCCATATCCTTTGTCACACAGATTGACTCATGTGCAATGCAGCCATTT-ATGAAACACTGGCATTTACCAGATGTAAACTTATTAGCAGATGGCAACTACAGATAATGTGCTGGATGTGCACATTTATTTAT----------ATGAATATAACCATCTCTCTAGATGCATCAAAAGATGCACAACATGAGAT-GCAATTTATTTCTACAAGTTCATGGTTAGGTGGTCAGGACAGGGAAAGAAGAGGAAAAAACTTTAAATCATGGTGCTTTATTCTTAGACACCTTTACCCTGTATACACAAGGGACATGCATGGTTGAAATAACGGAAACAAGGTGGATAAAAG-GAAAGTAACTTAAACTGATTTACCCAGGGATGCCCAGTTCAGGTGCTGCAGAGAAGAGCATGAGAACCGGGTGTCTTCAGGACGGGTGTGCATCTAGGAGCAGAGTGGGCGTTCGTCAGCACGGAGGAGCAAGTCCTGGGTCGGGGGACACTGGGGCTGCTGTCCCAGAGGCTGGCAGTGTAGCCCTGAACCCCCAAGACTTCACTGAGTCTCCCCTCAACCACCTAAACTGGAATAAACTGATGTAGCAGGACTCCTCAAACACCGTACAGGACCTCCATGTCCTCGATAGCCCCTGATGAGCCACGGTACCCTCAGGTCCTGGTGAAGGAGCTGGTGCTGCCTCCTGCCTTTCCCCACATGGGGTCCTGCAGCTCATCCCCCACAGCGTCAGATTCCCTCTACGGAACCTGCCCACAGATGTCTTCCGAGACCGGCAATGCGGGGAGGCCTGTGGCCC-AGACCCAGGAGGAACCAGCTGAGAGGCTCCGTGGAGGCATCGCTGATGGTGTAACCAGAATGAAAATGCCCACTACTGTTCTGCTCCCTGAGAACAAGTGTCAAGCCAGCATGAGTTTCCAGTGGGAACTTTTCCTTTTCTCCCCATATTGGTCGCTGTTTTAATGGACATTGCCTGGCTATTAAATCTCCCTATGAACTCACTTTGAAAATTATCTATTGCATTGGGCACCCTTTCAGGAATCACTGAGTGTTAATTTTTCTCAGTCTGAGTGATAATTTATGAGTCAAACAAGGACAGATCTGAAGCCAGAGGCTACTCCTGTCGGGAAATCCCTGAGGATGATGTTCCGGGGAAGCCTCCAGCCTTGGGAGTCCCCTGGAACTGAGCCAGCCCAGGTCATGAAGGGAGCTGGTGCCAGACACTGACT---GGGGACCTGCTGGCCTCTGGGCAGACCGCTCTGTCCATGCACCTCGCCTGCCAGGTATCcctgtgcagtcataccaagtcctgtgctcagaagggccccagagtagtttaaagttctgctgccgcc-cctggaagctcatgattttgaacaacaaca--aaaaaaaaccccacgttttccacttggccctacacattatgtggcctgtGCAGCTGTCAGGCTGTGGCCACGGTGCTGGCATCTCTCACACAGTGAAGGCTGCTGGAGTCCTGGCTGACTTGTTTTAACTCTTTTGAGAGGCCCACACCTAAGCTAAACACTCACGTGCCCCCTACGCTGACTCCCCACACTCTAAAGCATGAATCTGCCCCTTCAGCTGGGAGCGGGTCCTTGTGTCATCTGGGTTTTTGGAAAGAAGGTCAAGGGAGCCTGGGTTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33895538 1598 + 185818997 GATGTACAAAACCTGTCACA--CTCTGCCACACAGATGGACTTATGTGCAATGTAGCCATTTAATGAAACACTGGCATTTACCAGATGCAAACTTACTAG-AGACGACAACTAGAAATGATGTGCTGGATGCGCAGGTTTACTTAT----------ATGAATATAACCATCTATCTGGATGCATCAAAAGATACACAACATGAGATGCCGATCTATTTCTACTAGTTCATGATCAGGAGGTCAGGACAGGGAAGGAAGAGG-AAACACTTTGACTCATGGTCCTTTATTCTTAGATGCCGTCATCCTGCATATGCAAGGGACATGCATGGCTGAAATAATGGAAACAAAGTGGATAAAAGTGAAAGTAACTTAAACTGAGTCACCCAGGAATGCCCAATTCAGGTGCTGCAGAGAAGGGCATGAG-ACCGGGTGTCTTCAGGACAGGTGCACATCTAGGAGCGGAGTGGGCGTTCTTCAGCAGGGAGGAGTAAGGCCTGGGTCCGGGAACACTGGGGCTGCTGTCCCAGAGGCCGGCAGTGGAGCCCTGAACCCCCAAGACTTCACTGAGACTCCCCTCAGCCACCTAAACTGGGATAAACCAATGTAGCCAGACTCCTCGAACACCGTACAGGGTCTCCAGGTCCTCAAGGGCCCCTGACGAGCCACAGTCCCCTCAGGTCCTGGTGAAAGAGCTGGTGCTGCCTCCTGCCTTTCCCTGCATGGGATCCCACAGCTCATCCCCCACAGCCTCAGATTCCCTCTGCAGAACCTGCCCACAGATGTCTTCTGAGGCTGGCAACACTGGGAGGCCTGTGGCCC-GGACCCAGGAGGAACCGGCTGAAAGGCTGCGTGAAGGCATCGCTGAT-GCCTCCCCAGAGTGAAAATGCCCACTTCTGTTCTGC-CGCCGAGAACAACGGTCAAGCCAGCGTGAGTTTCTGGTTGGAACT-TTCCCTTCCTCCCCATGTTTGTCGCTGTTTTAATGGACATTGCCTGGCTATTAAATCTCCTGATGAACTCACTTTGAAAATTATCTATTGCACTGGGCACCCTTTCAGGAATCACTGACTGTCAA-TTTCCTCAGTCTGAGTGATAATCTATGAGTCAAGCAAGGACAGATCTGAGGCCAGAGGCTGCTCCTCTTGGGAAATCCCTGAGGATGATGCTCCGGGGAGGCCTCCAGCCTTGGGAGTCCCCTGGAACTGAGCCAGCCC-------------AGCTGGTGCCAGA---------------------------------------CTCTGTCCCTGCACCTGGCCTGCCAGGTATCcctgtgcggtcataccaagccctgtgctcagaagggccccggaatagtgtaacgttctgctgctgccacctggaagatcatgatgttgagcaa---------------------AATTTCCACTCGGCCCCACACATTACGTGGCCTGCCCAGCTGTCAGGCTGGGGCCATGGTGCTGGCGTCTCTCACCCAGTGAAGGTTGCTGCAGTCCTGGCTGACTTGTTTTGACTATTTTGTGAGGCCCACACCTGAGCTAAACACTCACGTGCCACCCACGCTGACTCCCCCCACTCTACAGCACGAACCTGCCCCTTCAGCTGGGGGAGGGTCTCCATGTCATC-AGGTTTTGGGAGAGAAGATCAAGGGAGCCTGGGTTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33511466 1634 + 192294377 GATGTACAAAACCTGTCACA--CTCTGCCACACAGATGGACTCATGTGCAATGTAGCCATTTAATGAAACACTGGCATTTACCAGATGCAAACTTACTAG-AGACGACAACTAGAAATGATGTGCTGGATGTGCAGGTTTACTTAT----------ATGAATATAACCATCTATCTGGATGCATCAAAAGATACACAACATGAGATGCCGATCTATTTCTACTAGTTCATGATCAGGAGGTCAGGACAGGGAAGGAAGAGG-AAACACTTTGACTCATGGTCCTTTATTCTTAGATGCCGTCATCCTGCATATGCAAGGGACATGCATGGCTGAAATAATGGAAACAAAGTGGATAAAAGTGAAAGTAACTTAAACTGAGTCACCCAGGAATGCCCAATTCAGGTGCTGCAGAGAAGGGCATGAG-ACCGGGTGTCTTCAGGACAGGTGCACATCTAGGAGCGGAGTGGGCGTTCTTTAGCAGGGAGGAGCAAGGCCTGGGTCCGGGAACACTGGGGCTGCTGTCCCAGAGGCCGGCAGTGGAGCCCTGAACCCCCAAGACTTCACTGAGACTCCCCTCAGCCACCTAAACTGGGATAAACCAATGTAGCCAGACTCCTCGAACACCGTACAGGGTCTCCAGGTCCTCAAGGGCCCCTGACGAGCCACAGTCCCCTCAGGTCCTGGTGAAAGAGCTGGTGCTGCCTCCTGCCTTTCCCTGCATGGGATCCCACAGCTCATCCCCCACAGCCTCAGATTCCCTCTGCAGAACCTGCCCACAGATGTCTTCTGAGGCTGGCAACACTGGGAGGCCTGTGGCCC-GGACCCAGGAGGAACCAGCTGAAAGGCTGCGTGAAGGCATCGCTGAT-GCCTCCCCAGAGTGAAAATGCCCACTTCTGTTCTGC-CGCCGAGAACAACGGTCAAGCCAGCTTGAGTTTCTGGTTGGAACT-TTCCCTTCCTCCCCATGTTTGTCGCTGTTTTAATGGACATTGCCTGGCTATTAAATCTCCTGATGAACTCACTTTGAAAATTATCTATTGCACTGGGCACTCTTTCAGGAATCACTGACTGTTAA-TTTCCTCAGTCTGAGTGATAATCTATGAGTCAAGCAAGGACAGATCTGAGGCCAGAGGCTGCTCCTCTTGGGAAATCCCTGAGGATGATGCTCCGGGGAGGCCTCCAGCCTTGGGAGTCCCCTGGAACTGAGCCAGCCC-------------AGCTGGTGCCAGACACTGACT---GGGGACCTGCAGGCCTCAGGGCAGACTGCTCTGTCCCTGCACCTGGCCTGCCAGGTATCcctgtgcggtcataccaagccctgtgctcagaagggccccggaatagtgtaacgttctgctgctgccacctggaagatcatgatgttgagcaa---------------------actttccactcggccccacacattacgtggcctgcccAGCTGTCAGGCTGGGGCCATGGTGCTGGTGTCTCTCACCCAGTGAAGGTTGCTGCAGTCCTGGCTGACTTGTTTTGACTATTTTGTGAGGCCCACACCTGAGCTAAACACTCACGTGCCACCCACGCTGACTCCCCCCACTCTACAGCACGAACCTGCCCCTTCAGCTGGGGGAGGGTCTCCATGTCATC-AGGTTTTGGGAGAGAAGATCAAGGGAGCCTGGGTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4273244 1633 - 9440265 GATGTACAAAACCTGTCACA--CTCTGCCACACAGATGGACTCATGTGCAATGTAGCCATTTAATGAAACACTGGCATTTACCAGATGCAAACTTACTAG-AGACGACAACTAG-AATGATGTGCTGGATGCGCAGGTTTACTTAT----------ATGAATATAACCATCTATCTGGATGCATCAAAAGATACACAACATGAGATGCCGATCTATTTCTACTAGTTCATGATCAGGAGGTCAGGACAGGGAAGGAAGAGG-AAACACTTTGACTCATGGTCCTTTATTCTTAGATGCCGTCATCCTGCATATGCAAGGGACATGCATGGCTGAAATAATGGAAACAAAGTGGATAAAAGTGAAAGTAACTTAAACTGAGTCACCCAGGAATGCCCAATTCAGGTGCTGCAGAGAAGGGCATGCG-ACCGGGTGTCTTCAGGACAGGTGCACATCTAGGAGCGGAGTGGGCGTTCTTCAGCAGGGAGGAGCAAGGCCTGGGTCCGGGAACACTGGGACTGCTGTCCCAGAGGCCGGCAGTGGAGCCCTGAACCCCCAAGACTTCACTGAGACTCCCCTCAGCCACCTAAACTGGGATAAACCAATGTAGCCAGACTCCTCGAACACCGTACAGGGTCTCCAGGTCCTCAAGGGCCCCTGACGAGCCACAGTCCCCTCAGGTCCTGGTGAAAGAGCTGGTGCTGCCTCCTGCCTTTCCCTGCATGGGATCCCACAGCTCATCCCCCACAGCCTCAGATTCCCTCTGCAGAACCTGCCCACAGATGTCTTCTGAGGCTGGCGACACTGGGAGGCCTGTGGCCC-GGACCCAGGAGGAACCGGCTGAAAGGCTGCGTGAAGCCATCGCTGAT-GCCTCCCCAGAGTGAAAATGCCCACTTCTGTTCTGC-CGCCGAGAACAACGGTCAAGCCAGCTTGAGTTTCTGGTTGGAACT-TTCCCTTCCTCCCCATGTTTGTCGCTGTTTTAATGGACATTGCCTGGCTATTAAATCTCCTGATGAACTCACTTTGAAAATTATCTATTGCACTGGGCACCCTTTCAGGAATCACTGACTGTTAA-TTTCCTCAGTCTGAGTGATAATCTATGAGTCAAGCAAGGACAGATCTGAGGCCAGAGGCTGCTCCTCTTGGGAAATCCCTGAGGATGATGCTCCGGGGAGGCCTCCAGCCTTGGGAGTCCCCTGGAACTGAGCCAGCCC-------------AGCTGGTGCCAGACACTGACT---GGGGACCTGCGGGCCTCAGGGCAGACTGCTCTGTCCCTGCACCTGGCCTGCCAGGTATCcctgtgcggtcataccaagccctgtgctcagaagggccccggaatagtgtaacgttctgctgctgccacctggaagatcatgatgttgagcaa---------------------ACTTTCCACTCGGCCCCACACATTACGTGGCCTGCCCAGCTGTCAGGCTGGGGCTATGGTGCTGGCGTCTCTCACCCAGTGAAGGTTGCTGCAGTCCTGGCTGACTTGTTTTGACTATTTTGTGAGGCCCACACCTGAGCTAAACACTCACGTGCCACCCACACTGACTCCCCCCACTCTACAGCACAAACCTGCCCCTTCAGCTGGGGGAGGGTCTCCATGTCATC-AGGTTTTGGGAGAGAAGATCAAGGGAGCCTGGGTTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16862187 1634 - 21915920 GATGTACAAAACCTGTCACA--CTCTGCCCCACAGATGGACTCATGTGCAACGTAGCCATTTAATGAAACACTGGCATTTACCAGATGCAAACTTACTAG-AGACGACAACTAGAAATGATGTGCTGGATGCGCAGGTTTACTTAT----------ATGAATATAACCATCTATCTGGATGCATCAAAAGATACACAACATGAGATGCCGATCTATTTCTACTAGTTCATGATCAGGAGGTCAGGACAGGGAAGGAAGAGG-AAACACTTTGACTCATGGTCCTTTATTCTTAGATGCCGTCATCCTGCATATGCAAGGGACATGCATGGCTGACATAATGGAAACAAAGTGGATAAAAGTGAAAGTAACTTAAACTGAGTCACCCAGGAATGCCCAATTCAGGTGCTGCAGAGAAGAGTATGAG-ACCGGGTGTCTTCAGGACAGGTGCACATCTAGGAGCGGAGTGGGCATTCTTCAGCAGGGAGGAGCAAGGCCTGGGTCCGGGAACACTGGGGCTGCTGTCCCAGAGGCCGGCAGTGGAGCCCTGAACCCCCAAGACTTCACTGAGACTCCCCTCAGCCACCTAAACTGGAATAAACCAATGTAGCCAGACTCCTCAAACACCGTACAGGGTCTCCAGGTCCTCAAGGGCCCCTGACGAGCCACAGTCCCCTCAGGTCCTGGTGAAGGAGCTGGTGCTGCCTCCTGCCTTTCCCTGCATGGGATCCCACAGCTCATCCCCCACAGCCTCAGATTCCCTCTGCAGAACCTGCCCACAGATGTCTTCTGAGGCTGGCAACACTGGGAGGCCTGTGGCCC-GGACCCAGGAGGAATCGGCTGAAAGGCTGCGTGAAGGCATCACTGAT-GCCTCCCCAGAGTGAAAACGCCCACTTCTGTTCTGC-CGCCGAGAACAACGGTCAAGCCAGCTTGAGTTTCTGGTCGGAACT-TTCCCTTCCTCCCCATGTTTGTCGCTGTTTTAATGGACATTGCCGGGCTATTAAATCTCCTGATGAACTCACTTTGAAAATTATCTATTGCACTGGGCACCCTTTCAGGAATCACTGACTGTTAA-TTTCCTCAGTCTGAGTGATAATCTATGAGTCAAGCAAGGACAGATCTGAGGCCAGAGGCTGCTCCTGTTGGGAAATCCCTGAGGATGATGCTCCGGGGAGGCCTCCAGCCTTGGGAGTTCCCTGGAACTGAGCCAGCCC-------------AGCTGGTGCCAGACACTGACT---GGGGACCTGTGGGCCTCAGGGCAGACTGCTCTGTCCCTGCACCTGGCCTGCCAGGTATCcctgtgcggtcataccaagccctgtgctcagaagggccctggaatagtgtaacgttctgctgctgccacctggaagatcatgatgttgagcaa---------------------ACTTTCCACTCGGCCCCACACATTACGTGGCCTGCCCAGCTGTCAGGCTGGGGCCATGGTGCCGGCGTCTCTCACCCAGTGAAGGCTGCTGCAGTCCTGGCTGACTTGTTTTGACTATTTTGTGAGGCCCACACCTGAGCTAAACACTCACGTGCCACCCACGCTGACTCCCCTGACTCTACAGCATGAACCTGCCCCTTCAGCTGGGGGAGGGTCTCCATGTCATC-AGGTTTTGGGAGAGAAGATCAAGGGAGCCTGGGTTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 2510 1638 - 21531802 GATGTACAAAACCTGTCACA--CTCTGCCACACAGATGGACTCATGTGCAATGTAGCCATTTAATGAAACACTGGCATTTACCAGATGCAAACTTACTAG-GGATGACAACTAGAAATGATGTGCTGGATGCACTGGTTTACTTAT----------ATGAATATAACCATCTATCTGTATGCATCAAAAGATACACAACATGAGATGCCGATCTATTTCTACTAGTTCATGATCAGGAGGTCAGGACAGGGAAGGAAGAGG-AAACACTTTGACTCATGGTCCTTTATTCTTAGATGCCGTCATCCTGCATATGCAAGGGACATGCATGGCTGAAATAATGGAAACAAAGTGGATAAAAGTGAAAGTAACTTAAACTGATTCACCCAGGAATGCCCAATTCAGGTGCTGCAGAGAAGAGCATGAG-ACCGGGTGTCTTCAGGACAGGTACACATCTAGGAGTGGAGTGGGCATTCTTCAGCAGGGAGGAGCAAGGCCTGGGTCTGGGGACACTGGAGCTGCTGTCCCAGAGGCCGGCAGTGCAGCCCTGAACCCCCAAGACTTCACTGAGACTCCCCTCAGCCACCTAAACTGGAATAAACCGATGTAGCCAGACTCCTCAAACACCGTACAGGGTCTCCAGGTCCTCAAGGGCCCCCAACAAGCCACAGTTCCCTCAGGTCCTGGTGAAGGAGCTGGTGCTGCCTCCTGCCTTTCCCCGCATGGGATCCTGCAGCTCATCCCCCACAGTCTCAGATTACCTCTGCAGAACCTGCCGACAGATGTCTTCTGAGGCCGGCAACACTGGGACGCCTGTGGCCCGGGACCCAGGAGGAACCGGCTGAGAGGCTGTGTGAAGGCATCGCTGAT-GCCTCCCCAGAGTGAAAATGCCCACTTCTGTTCTGC-CCCCGAGAACAACGGTCAAGCCAGCTTGAGTTTCCGCTCGGAACT-TTCCGTTCCTCCCCATGTTTGTCGCTGTTTTAATGGACATTGCCTGGCTATTAAATCTCCTGATGAACTCACTTTGAAAATTATCTATTGCACTGGGCACCCTTTCAGGAATCACTGACTGTTAA-TTTCCTCAGTCTGAGTGATAATCTACGAGTCAAGCAAGGACAGATCTGAGGCCAGAGGCTGCTCCTGTTGGGAAATCCCTGAGGATGATGCTCCGGGGAGGCCTCCAGCCTTGGGAGTCCCCTGGAACTGAGCCAGGCC-------------AGCTGGTGCCAGACACTGACTGGGGGGGACCTGCGGGCCTCAGGGCAGACTGCTCTGTCCCTGCACCTGGCCTACCAGGTATCcctgtgtggtcataccaagccctgtgctcagaagggccccagaatagtttaacgttctgctgctgctgcctggaagatcatgatgttgagcaa---------------------cctttccactcggccccacacattacgtggcctgcccAGCTGTCAGGCTGGGGCCATGGTGCCAGTGTCTCTCACCCAGTGAAGGCTGCTGCAGTCCTGGCTGACTTGTTTTGACTATTTCGTGAGGCCCACACCTGAGCTAAACACTCACGTGCCACCCACGCTGACTCCCCCCACTCTACAGCACGAACCTGCCCCTTCAGCTGGGGGAGGGTCTCCATGTCATA-GGGTTTTGAGAGAGAAGATCAAGGAAGCCTGGGTTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 18955 1634 - 2515279 GATGTACAAAACCTGTCACA--CTCTGCCCCACAGATGGGCTCATGTGCAATGTAGCCATTTAATGAAACACTGGCATTTACCAGATGCAAACTTACTAG-AGACGACAACTAGAAATGATGTGCTGGATGCGCAGGTTTACTTAT----------ATGAATATAACCATCTATCTGGATGCATCAAAAGATACACAACATGAGATGCCGATCTATTTCTACTAGTTCATGATCAGGAGGTCAGGACAGGGAAGGAAGAGG-AAACACTTTGACTCATGGTCCTTTATTCTTAGATGCCGTCATCCTGCATATGCAAGGGACATGCATGGCTGACATAATGGAAACAAAGTGGATAAAAGTGAAAGTAACTTAAACTGAGTCACCCAGGAATGCCCAATTCAGGTGCTGCAGAGAAGAGCATGAG-ACCGGGTGTCTTCAGGACAGGTGCACATCTAGGAGCGGAGTGGGCATTCTTCAGCAGGGAGGAGCAAGGCCTGGGTCCGGGAACACTGGGGCTGCTGTCCCAGAGGCCGGCAGTGGAGCCCTGAACCCCCAAGACTTCACTGAGACTCCCCTCAGCCACCTAAACTGGAATAAACCAATGTAGCCAGACTCCTCAAACACCGTACAGGGTCTCCAGGTCCTCAAGGGCCCCTGACGAGCCACAGTCCCCTCAGGTCCTGATGAAGGAGCTGGTGCTGCCTCCTGCCTTTCCCTGCATGGGATCCCACAGCTCATCCCCTACAGCCTCAGATTCCCTCTGCAGAACCTGCCCACAGATGTCTTCTGAGGCTGGCAACACTGAGAGGCCTGTGGCCC-GGACCCAGGAGGAACCTGCTGAAAGGCTGCGTGAAGGCATCGCTGAT-GCCTCCCCAGAGTGAAAACGCCCACTTCTGTTCTGC-CGCCGAGAACAACGGTCAAACCAGCCTGAGTTTCTGGTCGGAACT-TTCCCTTCCTCCCCATGTTTGTCGCTGTTTTAATGGACATTGCCTGGCTATTAAATCTCCTGATGAACTCACTTTGAAAATTATCTATTGCACTGGGCACGCTTTCAGGAATCACTGACTGTTAA-TTTCCTCAGTCTGAGTGATAATCTATGAGTCAAGCAAGGACCGATCTGAGCCCAGAGGCTGCTGCTGTTGGGAAATCCCTGAGGATGATGCTCCGGGGAGGCCTCCAGCCTTGGGAGTCCCCTGGAACTGAGCCAGCCC-------------AGCTGGTGCCAGACACTGACT---GGGGACCTGCGGGCCTCAGGGCAGACTGCTCTGTCCCTGCACCTGGCCTGCCAGGTATCcctgtgcggtcataccaagccctgtgctcagaagggccccggaatagtgtaacgttctgctgctgccacctggaagatcatgatgttgagcaa---------------------ACTTTCCACTCGGCCCCACACATTACGTGGCCTGCCCAGCTGTCAGGCTGGGGCCATGGTGCCGGCGTCTCTCACCCAGTGAAGGCTGCTGCAGTCCTGGCTGACTTGTTTTGACTATTTTGTGAGGCCCACACCTGAGCTAAACACTCACGTGCCACCCACGCTGACTCCCCCCACTCTACAGCACGAACCTGCCCCTTCAGCTGGGGGAGGGTCTCCATGTCATC-AGGTTTTGGGAGAGAAGATCAAGGGAGCCTGGGTTC i manLeu1.NW_012101810v1 C 0 C 0 s cebCap1.NW_016107703v1 377101 1653 - 2125214 GATGTACAAAACCTGTCACATTCTCTGTCACACAGATTGACTCATGTGCCACGTAGCCATTTAATGAAACACTGGCATTTACCAGATATAAGCTTATTAGCAGATGACAACTAGCAATAATGTGCTAGATGTGCACATTTGTTTATCCACTGAATCATGAATATAACCATCTCTCTAGGTGCATCAAAAGATACACAACATGAGATGCCAATTTATTTCTACGAGTTTGTGATCAGGTGGTCAGGGCAGGGAAAGAAGAGG-AAAAACTTTAAATCACAGTCCTTTATTCTTAGAAACATTTATCCTACATACACAAGGGACATATATGACTGGAATCATGGAAACAAAGTGGATAAAAGTGAAAGTAACTTAAAGAGATTTACCCAGGATTGCCTAATTCAGGTGCTTCAGGGAAGAGCATGAGAACTGGGTGTCTCCAGGACAGGTGTGCATCTAGGAGCAGAGTGGGCGTTCATCAGCGGGGAGGAGCAAGGCCTGGGGCAGGGGATACTGGGGCTGCTGTCCCATAGGCCAGAAGTGTGGCTCTGAACCCCCCAGAGGTCACTGAGGTGCCCCTCGACCACTTAAACTGGAATAAACAGCTTTCACCAGACTCCTCAAACACCACACAGGCTCTCTATGTCCTCGAGGG-CCCTGATGAGCCACAGTCCCCTCACATCCTGGTGAAGGGGTTGGTGCTGCCTCCTGC----CCCCACATGGGATCCTGCAGCTTATCACCCACAGCCTCAGTTTCCCTCTACAGAGCCTCCACACAGACGTCTTCTGAGGCCAACAATACTGGGAGGCCTGTGGCCC-AGACCCAGGGGCAACCAGCTAAGAGGCTCCATGGAGGCTTCGCCAGTGGTCTCCCTGGAGTGGAAATGCCCACTTCTATTCTGTGCCCTGAGAACAGCTGTCAAGCCAGCATGAGTTCCCAGTCAGAACTTTTCCATTCATGCCCATGTTTGTTGCTGTTTTAATGGACATTGCCTGGCTGTTAAATCTCCTGATGAACTCAAGTTGAAAATGATCTGTTCCAATATGCACCCTTTCAGTAATCACTGAGTGTTAA-TTTTCTCAGTCTGAGTGATAATTTGTGAGTCAAACAAGGACAGATCTGAGGTCAGAGGCTGCTCCCGTTGGGAAATGCCTGAGGATGATGTTCTGGGGA-------AGTTTTGGGATTCCCCTAGGACTGCACCAACCCAGGTCATGAAGGGAGCTGATGCCAGACACTGAGT---GGGGACCTGCTGGCTTCTGGACAGACCACTCTGTCCCTGAACCTGGCCTGCCAGTTACCcctgtgtggt-----caagtcttgtgctcagaagggccccagaatagtttaatgttctgctgctgccatctggaacctcatgattttgaacaa-----------aaaaatccacgtttaacacttggctctacacattatgtggcctgcccAGTTTTCAGGCTGGGGCCATGGTGCTGGCCTCTCTCACACACTGAAGGCTGCTGGAGTCTTGGCTAACTTGTTTTGACTCTT--GTGAGGCACACATCTGAGATAAACACTCAAGCGCCCCCAATGCTAACTCCCCTGACTCTACAGCATGAATCTGTCCCTTCAGCTGTGGGAGGGTCCTCATGTCATCTGGGTTTTGGGAG---AGGTCAAGGGAGCCTGGGTTC i cebCap1.NW_016107703v1 C 0 C 0 a score=100350.000000 s hg38.chr3_KI270784v1_alt 81812 22 + 184404 TAGTTCTTCAGTAATCAAGAGT s panTro5.chrUn_NW_015975002v1 9773 22 + 14113 TAGTTCTTCAGTAATCAAGAGT i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01015914v1 0 22 - 432965 TAGTTCTTCAGTAATCAAGAGT i gorGor5.CYUI01015914v1 N 0 C 0 s nomLeu3.chr20 54418 22 + 85365473 TAGTTCTTCAGTTATCCAGAGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33897136 22 + 185818997 TAGTTCTTCAGTCATCCAGAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33513100 22 + 192294377 TAGTTCTTCAGTCATCCAGAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4274877 22 - 9440265 TAGTTCTTCAGTCATCCAGAGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16863821 22 - 21915920 TAGTTCTTCAGTCATCCAGAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 4148 22 - 21531802 TAGTTCTTCAGTCATCCAGAGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 20589 22 - 2515279 TAGTTCTTCAGTCATCCAGAGT i manLeu1.NW_012101810v1 C 0 I 4 s cebCap1.NW_016107703v1 378754 22 - 2125214 TAGTTCTTTAGTTATCTAGAGT i cebCap1.NW_016107703v1 C 0 C 0 a score=14817.000000 s hg38.chr3_KI270784v1_alt 81834 4 + 184404 AAGG s panTro5.chrUn_NW_015975002v1 9795 4 + 14113 AAGG i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01015914v1 22 4 - 432965 AAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 54440 4 + 85365473 GAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33897158 4 + 185818997 GAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33513122 4 + 192294377 GAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4274899 4 - 9440265 GAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16863843 4 - 21915920 GAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 4170 4 - 21531802 GAGG i chlSab2.chr28 C 0 C 0 s cebCap1.NW_016107703v1 378776 4 - 2125214 GAGG i cebCap1.NW_016107703v1 C 0 C 0 e manLeu1.NW_012101810v1 20611 4 - 2515279 I a score=124812.000000 s hg38.chr3_KI270784v1_alt 81838 149 + 184404 GTCTTACCTGTT-----CACAGGTCCCCGTGGCTGCTTTACAGAAAGCAGGAAGTGGCCACTTCAGCCACACGGCTGCATTTCCAGCTCAGTCCAGGCAGAGCTGCACCCTGCCTTGCACCTCTGCAGATCCTGAGGGGAGTCCTTAACTGAGC s panTro5.chrUn_NW_015975002v1 9799 149 + 14113 GTCTTACCTGTT-----CACAGGTCCGCGTGGCTGCTTTACAGAAAGCAGGAAGTGGCCACTTCAGCCACATGGCTGCATTTCCAGCTCAGTCCAGGCAGAGCTGCACCCTGCCTTGCACCTCTGCAGATTCTGAGGGGAGTCCTTAACTGAGC i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01015914v1 26 149 - 432965 GTCTTACCTGTT-----CACAGGTCCCTGTGGCTGCTTTACAGAAAGCAGGAAGTGGCCACTTCAGCCACACGGCTGCATTTCCAGCTCAGTCCAGGCAGAGCTGCACCCTGCCTTGCACCTCTGCAGATCCTGAGGGGAGTCCTTAACTGAGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 54444 148 + 85365473 GTCTTACCTGTT-----CACAGGTCCCTGTGGCTGCTTTACAGAAAGCAGGAAGTGGCCACTTCAGCCACATGGCTGCATTTCCAGCTCAGTCCAGGCAGAGCTGCACCCTGCCTTGCACCTCTGCAGATTCTG-GGGGAATCCTTAACTGAGC i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 378780 154 - 2125214 GTCTTACATGTCCCCAACCCAGGTCCCTGTGGCTGCTTTGCAGAAAGGAAGAAGTGGCCACTTCAGCCACACAGCTGCATTTCCAGCTCAGTCCAAGTAGAGCTGTGCCCTGCCATGCACCTCTGCAGATTCTGGTTGGAATCCTTAACTAAGC i cebCap1.NW_016107703v1 C 0 I 2449 e cerAty1.NW_012002954v1 16863847 0 - 21915920 C e rheMac8.chr3 33897162 0 + 185818997 C e manLeu1.NW_012101810v1 20611 4 - 2515279 I e chlSab2.chr28 4174 0 - 21531802 C e macNem1.NW_012019910v1 4274903 0 - 9440265 C e macFas5.chr3 33513126 0 + 192294377 C a score=11841.000000 s hg38.chr3_KI270784v1_alt 81987 22 + 184404 CAGGGCGAGTCCTGGGGGCACT s panTro5.chrUn_NW_015975002v1 9948 22 + 14113 CAGGGCGAGTCCTGGGGGCACT i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01015914v1 175 22 - 432965 CAGGGTGAGTCCTGGGGGCACT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 54592 22 + 85365473 CAGGGCGAGTCCTGGGGGCACA i nomLeu3.chr20 C 0 C 0 e cebCap1.NW_016107703v1 378934 2449 - 2125214 I e cerAty1.NW_012002954v1 16863847 0 - 21915920 C e rheMac8.chr3 33897162 0 + 185818997 C e manLeu1.NW_012101810v1 20611 4 - 2515279 I e chlSab2.chr28 4174 0 - 21531802 C e macNem1.NW_012019910v1 4274903 0 - 9440265 C e macFas5.chr3 33513126 0 + 192294377 C a score=35528.000000 s hg38.chr3_KI270784v1_alt 82009 40 + 184404 CTGCCCCTG---------------GGCAGGCCCTGAATCTCCTCTGCTCCCACAC s panTro5.chrUn_NW_015975002v1 9970 55 + 14113 CTGCCCCTGTGGACACTGCCCCTGGGCAGGCCATGAATCTCCTCTGCTCCCACAC i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01015914v1 197 55 - 432965 CTGCCCCTGTGGACACTGCCCCTGGGCAGGCCCTGAATCTCCTCTGCTCCCACAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 54614 55 + 85365473 CTGCCCCTGTGGACACTGCCCCCGGGCAGGCCATGAATCTCCTCTGCTCCCACAC i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 381383 40 - 2125214 CTGCCCCTG---------------GGCAGGCCATGAGTTTCCTCTGCTCCCACAC i cebCap1.NW_016107703v1 I 2449 I 13 e cerAty1.NW_012002954v1 16863847 0 - 21915920 C e rheMac8.chr3 33897162 0 + 185818997 C e manLeu1.NW_012101810v1 20611 4 - 2515279 I e chlSab2.chr28 4174 0 - 21531802 C e macNem1.NW_012019910v1 4274903 0 - 9440265 C e macFas5.chr3 33513126 0 + 192294377 C a score=27162.000000 s hg38.chr3_KI270784v1_alt 82049 55 + 184404 TCTAGAGTTCAACGGGTCTCAGGGGCTCTGCCTGAGG-----ACTGCCCTTCAACCAGGT s panTro5.chrUn_NW_015975002v1 10025 55 + 14113 TCTAGAGTTCAACAGGTCTCAGGGGCTCTGCCTGAGG-----ACTGCCCTTCAACCAGGT i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01015914v1 252 55 - 432965 TCTAGAGTTCAACAGGTCTCAGGGGCTCTGCCTGAGG-----ACTGCCTTTCAACCAGGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 54669 60 + 85365473 TCTAGAGTTCGGCAGGTCTCAGGGGCTCTACCTGCAGAGCACACTGCCCTTCAACCAGGT i nomLeu3.chr20 C 0 C 0 e cebCap1.NW_016107703v1 381423 13 - 2125214 I e cerAty1.NW_012002954v1 16863847 0 - 21915920 C e rheMac8.chr3 33897162 0 + 185818997 C e manLeu1.NW_012101810v1 20611 4 - 2515279 I e chlSab2.chr28 4174 0 - 21531802 C e macNem1.NW_012019910v1 4274903 0 - 9440265 C e macFas5.chr3 33513126 0 + 192294377 C a score=178871.000000 s hg38.chr3_KI270784v1_alt 82104 289 + 184404 ATTCGTAATTTCCCCAAGACCCAGGCTTGCTGAGTCACTCAGTTACCTGAATGCCTTTTTCACAAAGGGATGACTGTGCTGCTCCGTCTTCCTTCTTTTTTGTTTGCGAGGCCACAGGGAAATCTGGATCCTCTGGTGAAAAAGCAAATCCAGTtgct-----------------gctgctgctgctgctgctgctgctgctgctgctgctgcCAGTTCTTGTAAATGTCCTCACTT----GGTTTCTGGGCAGCAACTTCCTTGACTTGCCTGGGGAGCGGATCTGAGCTGCATTTACCAGGCCATGCC s panTro5.chrUn_NW_015975002v1 10080 278 + 14113 ATTCGTAATTTCCCCAAGACCCAGGCTTGCTGAGTCACTCAGTTACCTGAATGCCTTTTTCACAAAGGGATGACTGTGCTGCTCCGTCTTCCTTCTTTTTTGTTTGCGAGGCCACAGGGAAATCTGGATCCTCTGGTGAAAAAGCAAATCCAGTTTct-----------------gctgctg-----------gctgctgctgctgctgctgcCGGTTCTTGTAAATGTCCTCACTT----GGTTTCTGGGCAGCAACTTCCTTGACTTGCCTGGGGAGCGGATCTGAGCTGCATTTACCAGGCCATGCC i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01015914v1 307 306 - 432965 ATTCGTAATTTCCCCAAGACCCAGGCTTGCTGAGTCACTCAGTTACCTGAATGCCTTTTTCACAAAGGGATGACTGTGCTGCTCCGTCTTCCTTCTTTTTTGTTTGCGAGGCCACAGGGAAATCTGGATCCTCTGGTGAAAAAGCAAATCCAGTttcttcttcttcttcttcttctctgctgctgctgctgctgctgctgctgctgcCGCCGCCAGTTCTTGTAAATGTCCTCACTT----GGTTTCTGGGCAGCAACTTCCTTGACTTGCCTGGGGAGCGGATCTGAGCTGCATTTACCAGGCCATGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 54729 265 + 85365473 ATTCATAATTTCCCCAAGACCCAGGCTTGCTGAGTCACTCAGTTACCTGAACGTC--TTTCACGAAGGGATGACTGTGCTGCTCCGTCATCC-TCTTTTTTGTTTGCGAGGCCACAGGGAA------ATACTCTGGTGAAAAAGCAAATCCAGTTTct-----------------tct---------------tcttctgctgctgctgctgctgGTTCTTGTAAATGTCCTCACTT----GGTTTCTGGGCAGCAACTTCCTTGACTTGCCTGGGGAGTGGATCTGAGCTGCATTTACCAGGCCACGCC i nomLeu3.chr20 C 0 C 0 s otoGar3.GL873611 2090982 261 - 8137123 ATTCATAATTTCTATGAGACTCAGCTTTGCTGAATGACTCAGATACATGAATGTT--TTTCACAA---GACGACTGTGCTGTCATTGTTTCT---TATTTCACTTGTGCAGTTACAGGGAGATCTGGGTACTCTGGTGAAAAGGCAAAACATGTTTCT-----------------------------------------GCTATTAGTGCTGTTGGTTCTTGTCAATGTCCTCATTTACAAGTTGCCTCAAAGGCAACTCCCTTGGCTTTGCTGAGGAATGAATCTGAGCTGCATTAACCAGGTGGTACC i otoGar3.GL873611 N 0 C 0 e cebCap1.NW_016107703v1 381423 13 - 2125214 I e cerAty1.NW_012002954v1 16863847 0 - 21915920 C e rheMac8.chr3 33897162 0 + 185818997 C e manLeu1.NW_012101810v1 20611 4 - 2515279 I e chlSab2.chr28 4174 0 - 21531802 C e macNem1.NW_012019910v1 4274903 0 - 9440265 C e macFas5.chr3 33513126 0 + 192294377 C a score=658356.000000 s hg38.chr3_KI270784v1_alt 82393 646 + 184404 CAGGGGAAGTGATCAGTGTGGGACCGTGAAGCTGGATTTCCCCAGGAGCTCCCTCCAAGCTTCTGGGATGATGATAAGACTCGGGATGAACCAAGGATCTCGAACCATGG-ACAATGTGA-AGTCTAGACCCAGTGGAGGAAGAGAAAGGCTACGG---GAAGGGCAGGCTTCACGttactgagcatccgctacctgccacacactttcacgtggccttattctgtgtgtttctcacagcacccttgagaaatagagactacgatcacatcttttacataaaagaaaaccaccatccagggaggcgaagtcccttgctcaCAGACtgtcatgtgggaagctctctggatgcaatgattgatgtcctccagttgcagtaccaggcaagctgtcccagagttcatggagcggaaaggctcgagaagcaactgaggatgctcgaatcacaggtttataaaatccattcgtaaaacacagcaagaagctgagggaaggagatgggagggccgtatgacctgattcctgtgctgtcaacattcatcgg-ttctcttctttctctgctagtcaacctcacccactcaggtgtgaccacgaggaccagagccgaggtctgggcaagagtgctcacagctgaaggg--------cttatgacacacac s panTro5.chrUn_NW_015975002v1 10358 642 + 14113 CAGGGGAAGTGATCAGTGTGGGACCGTGAAGCTGGATTTCCCCAGGAGCTCCATCCAAGCTTCTGGGATGATGATAAGACTCGGGATGAACCAAGGATCTTGAACCATGGGACAATGTGA-AGTCTAGACCCAGTGGAGGAAGAGAAAGGCTACGG---GAAGGGCAGGCTTCACtttactgagcatccgctacctgccacacactttcacgtggc-ttattctgtgtgtttctcacagcacccttgagaaatagagactacgatcacatcttttacataaaagaaaaccaccatccagggaggcgaagtcccttgctcaCAGACtgtcatgtgggaagctctctggatgcaatgat----gtcctccagttgcagtaccaggcaagctgtcccagagttcatggagcggaaaggctcgagaagcaactgaggatgcttgaatcacaggtttataaaatccattcgtaaaacacagcaagcagctgagggaaggagatgggagggccgtatgacctgattcctgtgctgtcaacattcatcgg-ttctcttctttctctgctagtcaacctcaccccctcaggtgtgaccacgaggaccagagccgaggtctgggcaagagtgctcacagctgaaggg--------cttatgacacacac i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01015914v1 613 643 - 432965 CAGGGGAAGTGATCAGTGTGGGACCGTGAAGCTGGATTTCCCCAGGAGCTCCCTCCAAGCTTCTGGGATGATGATAAGACTCGGGATGAACCAAGGATCTCGAACCATGGGACAATGTGA-AGTCTAGACCCAGTGGAGGAAGAGAAAGGCTACAG---GAAGGGCAGGCTTCACGTTACTGAGCATCCGCTACCTGCCACAcactttcacgtggccttattctgcgtgtttctcacagcacccttgagaaatagagactacgatcacatcttttacataaaagaaaaccaccatccagggaggcgaagtcccttgctcaCAGACtgtcatgtgggaagctctctggatgcaatgat----gtcctccagttgcagtaccaggcaagctgtcccagagttcatggagcggaaaggctcgagaagcaactgaggatgctcgaatcacaggtttataaaatccattcgcaaaacacagcaagaagctgagggaaggagatgggagggccgtatgacctgattcctgtgctgtcaacattcatcgg-ttctcttctttctctgctagtcaacctcacccactcaggtgtgaccacgaggaccagagccgaggtctgggcaagagtgctcacagctgaaggg--------cttatgacacacac i gorGor5.CYUI01015914v1 C 0 I 20920 s nomLeu3.chr20 54994 646 + 85365473 CAGGGGAAGTGATCAGTGTGGGACTGTGAAGCTGGATTTCCCCAGGAGCTCCCTCCAAGCTTCTGGGATGATGATAAGACTCGGGACGAACCAAGGATCTCGAACCATGGGACAATGTGA-AGTCTAGACCCAGTGAAGGAAGAGAAAGGCTGCGGGACGAAGGGCAGGCTTCACAttactgagcgtccgctatctgccacacactttcacgtggccttattctgtgtgtttctcacagcacccttgagaagtagagacgacgatcacatcttttacataaaagaaaaccaccatccagggaggcaaagtcccttgctcaCAGACtgtcatgtgggaagctctctggatgcaatggt----gtcctccagctgcagtaccgggccagctgtcccagagttcacggagcggaaaggctcaaggagcaacttaggatgcttgaatcacaggtttataaaatccattcgtaaaacacagcaggcagctgagggaaggagatgggagggccatacgacctgattcctgtgctgtcaacattcttcag-ttctcttctttctctgctagtcaacctcacccccttaggtgtgaccacgaggaccagagctgaggtccgggcaagagtgctcacagctgaaggg--------gttatgacacacac i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 381436 641 - 2125214 CAGGGGCAGTGATCAGTGTCGGGGTGTGAAGCTGGATTTCTCCAGGAGCTCCCTCCAAGCTTTTTGGGTGATGATAAGACTTGGGATGAATTCAGGATCTCAAACCAAGGGACAATGTGA-AGTCTAGACCCAGTGGAGGAAGAGAAAGGCTACGGGAAGAAGGGCAGGCTTCACAttactgagcatccattatctgccacacacttccacgtgtc-ttattttatgcatttctcacaacagccttgagaagtagaaattacaatcacatcttttacagaagagaaaaacaccttcca-ggaggtgaagtcccttgctcatagaccaTGAtgtgggaagctctccggatgcaatggt----gtcctccagttgcagtatcaagcaagctattccagagttcatagaatggaaaggtttgagaagcaatttaaggtgcttgaatcagaggtttataaaatccattcataaaacacagcgagaagctgagggaaggagatgggAGGGCCACATGACCCGATTTCTGTGTTGCAAACATCCATCGGTTTCTCTTCTTTCTCTGCCAGT----TTCACCCACTCAGGTGTGACCACAAGGACGAGAGCCGAGGTGTGGGCAAGAGTGCCCACAGATGAAGGT--------CCTGTGACACACAC i cebCap1.NW_016107703v1 I 13 C 0 s otoGar3.GL873611 2091243 613 - 8137123 CAGGGCCA-TGATCAGTGTGGGAGTGTGGCATTAGATCTCCCCAGGAGCTCCTTGCAAGCTTCTGAGATGATTGTGAGACAT-GCCTGGACCAGAGATCCC-AACCACCAGACAGTGTGGCAGTCTAGACCCAGCAGAGGAC-AGAAAGGCTGTGG---GAA-GGCAGATTTCATATCACCCAGCACTTATCACCTGCCACACACT--CATGTGCC-TTACTCTATTTTGTCTGCACACCAATCTGGAGAAGAAGAGATTATTCTCACATCTTTTACAAAGGAGAAAGCAGCCA-CCAGGGAGGTGAAGTCCCTT-TTCACAGGCtgtcagatgggaagtcctctgaatgagatgat----atcctccagttacagtaccaggcaagctatccctgagctcatggaacaggaaggctcac--agcacct-aatctgcttgaatca-------ACCAAA---------AAGGTGCTGGGAGGAG-TAGGGGAAGGAGA-Gggaaggccatattacccgattcccaag-tgcaaacattcacagg-ttctctt-------tgccagtcagcctcacctgttcgtgtgtgaccatgaggaccagagccgaggtctgaacaagagcatccaccactgcagggacccaggtcctgtgatacacag i otoGar3.GL873611 C 0 C 0 e cerAty1.NW_012002954v1 16863847 0 - 21915920 C e rheMac8.chr3 33897162 0 + 185818997 C e manLeu1.NW_012101810v1 20611 4 - 2515279 I e chlSab2.chr28 4174 0 - 21531802 C e macNem1.NW_012019910v1 4274903 0 - 9440265 C e macFas5.chr3 33513126 0 + 192294377 C a score=888233.000000 s hg38.chr3_KI270784v1_alt 83039 1414 + 184404 cggctcaacgggacagacatgggacaagtgtgcctgatcatggtggagttgccaagaagcagctgtcgcactgccatgggttctacgtgtttcttgggcagaggacgcatgggaccagaatgggcaccaggaat-ggTGGTGAACAAAGGCCCCATGGTTCTGCATGTTTAGGTGTCTCTTGTATAAAGGCACATTGTGAATTGAACATTTAGTGCCCAGGAGCCTCATGCATATTAAGTATCTCTTGGCCCTTGTGTCTCTTCCTTCCCACATGTAACATACCTGTTCTCTGTAACTATCTAT---TCTGAACGTATCTAAAAACCATGTCTTGCCTGTGTTATACAAACCACATGCATACTCACGTTCTCTGATGTAGCTGAAGGTTTCCTAAGGCCAGGGCACATTTCAGGGTCACATAG-AGTGGAGAGAGGGACCAAAATAGCCTTGCTCTGTTTGAC-TCCCAGCCGAGATGTCTGCTGGGCAGCACTGCCTCTGTAGGCTCTAATGGGGGAAGGGAGCTCAGGGGAGCCTCTGGGGCTGGGCAGGCTACCAGAGGGTGTGGACATTTGGATGGACCCTGACGGAGGACTTGGGTTTCCTTGGGAGGAAGTGTCAGGAAGGGCATCTGGGGCTGAGAGCACTGTGTGAGCAACAGAAGGAAGGAAACTGTGGCTGGCTGGGAAGGGATGGTATGGG-GGACAGGGTGAGACTTCTGGCCCTGGGTGCTCAGATGAAGACCTGGGGTTGCCTAGTGGCTGGAAACACACACCAGCTGTGGCAACTTGACCTCTGGGATGTGAGTGTGCAGGCAGCTGCTGAGAACGGCTGTGGATTTGGAGATGTGGCTACAGGGAATGGGCAATGGATTCATCTGGGAATTCTGCAGGCAGTGGCCCATAG-----------------AGGAAACAGCCTGGAAATGAGACTGCAGATACGTGCTAAAGAGGCTGGAGGAACAGTGACCCCAGTACAAGTTTATGGATCTTATCCACAATCTAAAGAAATGGAGGCCAAATGG--------------------CTTTTGAAATTCTAAGATACATGCAGAGGAA---GAGTAA-TGCTTCATGGGAGAGTCAGACTCTTACTGGCAGTGACGCTACACGGTAGAGCTCTG-TTCCTCCTGCCCATGTCTGTGGTTGGGGCTGGGGT-AGTGCACAA------ACATGATGCTGATGAGGCCCAAGCATTGTTGGAAAAGAATTCAGCAGCTGCCACAAGAATCTTGAATCCGTGGGTGAAGACCTTGACTTTCTCTGGGACCAATGTGGTCAAGAACAAAGTAAAATCATGACAAC-AAACACTGTTCAGTTTTCCAAATATAAGCTATTTTAAATACTCTACATTTACCCTCAAAGACTGACATAACTTAGAATAACTTTTATAACAGCAAGGATGAGAACTAAAACTTAAATTGTAAATACAA s panTro5.chrUn_NW_015975002v1 11000 1414 + 14113 cagctcaatgggacagacatgggacaagtgtgcctgatcatggtggagttgccaagaagcagctgtcgcactgccatgggttctacgtgtttcttgggcagaggacgcatgcgaccagaatgggcaccaggaat-ggtggtgaacgaAGGCCCCATGGTTCTGCATGTTTAGGTGTCTCTTGTATAAAGGCACATTGTGAATTGAACATTTAGTGCCCAGGAGCCTCATGCATATTAAGTATCTCTTGGCCCTTGTATCTCTTCCTTCCCACATGTAACATACCTGTTCTCTGTAACTATCTAT---TCTGAACGTATCTAAAAACCATGTCTTGCCTGTGTTATACAAACCACATGCATACTCACGTTCTCTGATGTAGCTGAATGTTTCCTAAGGCCAGGGCACATTTCAGGGTCACATAG-AGTGGAGAGAGGGACCAAAATAGCCTTGCTCTGTTTGAC-TCCCAGCCGAGATGTCTGCTGGGCAGCACTGCCTCTGTAGGCTCTAATGGGGGAAGGGAGCTCAAGGGAGCCTCTGGGGCTGGGCAGGCTACCAGAGAGTGTGGACATTTGGGTGGACCCTGACGGAGGACTTGGGTTTCCTTGGGAGGAAATGTCAGGAAGGGCATCTGGGGCTGAGAGCACTGTGTGAGCAACAGAAGGAAGGAAACTGTGGCTGGTTGGGAAGGGATGGTATGGG-GGACAGGGTGAGACTTCTGGCCCTGGGTGCTCAGATGAAGACCTGGGGTTGCCTAGTGGCTGGAAACACACACCAGCTGTGGCAACTTGACCTCTGGGATGTGAGTGTGCAGGTAGCTGCTGAGAACGGCTGTGGATTTGGAGATGTGGCTACAGGGAATGGGCAATGGATTCATCTGGGAATTCTGCAGGCAGTGGCCCATAG-----------------AGGAAACAGCCTGGAAATGAGACTGCAGATACGTGCTAAAGAGGCTGGAGGAACAGTGACCCCAGTACAAGTTTATGGATCTTATCCACAATCTAAAGAAATGGAGGCCAAATGG--------------------CTTTTGAAATTCTAAGATACATGCAGAGGAA---GAGTAA-TGCTTCATGGGAGAGCCAGACTCTTACTGGCAGTGACGCTACACAGTAGAGTTCTG-TTCCTCCTGCCCATGTCTGTGGTTGGGGCTGGGGT-AGTGCACAA------ACATGACGCTGATGAGGCCCAAGCATTGTTGGAAAAGAATTCAGCAGCTGCCACAAGAATCTTGAATCCGTGGGTGAAGACCTTGACTTTCTCTGGGACCAATGTGGTCAAGAACAAAGTAAAATCATGACAAC-AAACACTGTTCAGTTTTCCAAATATAGGCTATTTTAAATACTGTACATTTACCCTCAAAGACTGACATAACTTAGAATAACTTTTATAACAGCAAGGATGAGAACTAAAACTTAAATTGTAAATACAA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 55640 1411 + 85365473 cggctcgatgggacagacatgagacaagtgtgcccgatcgtggcggggctgccaagaagcagctgtcgcactgccatgggttctacgtgtttcttgggcagaggacacatgggaccagaatgggcaccaggaat-ggtggtgaacgaAGGCCCCATGGTTCTGCATGTTTAGGTGTCTCTTGTATAAAGGCACCTTGTAAATTGAACATTTAGTGACCAGAAGCCTCATGCATATTAAGTATCTCTTGGCCCTTGTGTCTCTTCCTTCCCACATGTAACATGCATGTTCTCTGTAACTATCTAT---TCTGAACGTACCTAAAAACCATGTCTTGCCTGTGTTATACAAACCACATGCATACTCCTGTTCTCTGATGTAGCCGAATGTTTCCTAAGGCCAGGGCACATTTCAGGGTCACATGG-AGTGAAGAGAGGGGCCAAAATAGCCTTGCTCTGTCTGAC-TCCGAGCCAAGATGTCTACTGGTCAGCACTGCCTGTGTAGGCTGTGATGGGGGAAGGGAGCTCAGAGGAGCCTCTGGGGCTGGGCAAGCTACCAGAGAGTGTGGACATTTGGGTTGACCCTGACGGATGACTTGGGTTTTCTTGGGAGGAAGTGTCAGGAAGGGCATCTGGGGCTGAGAGCACTGTGTGGGCAACAAAAGGAAGGAAAC--TGGCTGGCTGGGAAGGGCTGGTATGGG-GGACAGGGTGAGACTTCTGGCCCTGGGTGCTCAGATGAAGACCTGGGGTTGCCTAGTGGCTGGAAACACACGCCAGCTGTGGCAACTTGACCTCTGGGATGTGAGTGTGCAGGCAGCTGCTGAGAACGGCTGTGGATTTGGAGATGTGGCTACGGGGAATGGGCAATGGATTCATCTGGGAATTGTGCAGGCAGTGGCCCATGG-----------------AGGAAACAGCCTGGAAATGAGACTGCAGATACGTGCTGAAGAGGCTGGAGGAACAGTGACCCCAGTACAAGTTTATGGATCTTATCCACAATCTAAAGAAAGGGAGGCCAAATGG--------------------CTTTTGAAATTCTAAAATACATGCAGAGGAA---GAGTCA-TGCTTCATGGGAGAACCAGACTCTTACTGGCAGTGACGCTACAGCGTAGAGCTCCG-TTCCTCCTACCCATGTCTGTGGTTGGGGCTGGGGC-AGTGCACAA------ATACGACGCTGACGAGGCCCAAGCATTGTTGGAAAAGAATTTAGCAGCTGCCAC-AGAATCTTGAATCCGTGGGTGAAGACCTTGACTTTCTTTGGCATCAATGTGGTCAAGAACAAAGTAAAATCATGACAAC-AAAAATTGTTCAGTTTTCCAAATATAAACTATTTTAAATACTTCACATTTATCCCCAAAGACTGACATAACTTAGAATAATTTTTATAGCAGCAAGGGTGAGAACTAAAACTTAAATTGTAAATACAA i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 382077 1408 - 2125214 TGGCTCAGTGGGACAGACATGGGACAAGTGTGTCTGATGGTAGTAGGGCTGCC---AAGCAGCTGTCACACTGCCAC-AGTTCTACATgtttcctggacagatgacacatgggaccaacatgggcgccatgaat-ggtggtgaacgaAGACCCCAGGGTTCTGCATGTTTAGGTGCCTCTTGTATAAAGGCACATGG-----TGGACATTTCCTGCCCAGGAGCCTCATGCATATTAATTATCTCTTGACCCTTGCGTCTCTTCTCTTC--CATGTAACATGCATGTTCTCTGTAACCATGTAT---TCTGAATGTATCTAAAAATAATGTCTTGCCTGTGTGATACAAATCACATGCATATTCACGTTCTCTGATGTAGCTG-ATGTTCCCTAAGGCCAGGGCACATTTcagggtcatatag-agcagagagaggggccaagagagtcttgctctgtctgac-tccaagtcaagatgtctactaggcagcactgcctctgcaggctttaaatgggaaagggagttcagaggaagctctgggcctgggcaggctcccagagggcgtggacatttgagttgaccctgatggatgacttggatttccttacgagaaagtgtcaggaagggcatctggggctgagagcactgtgtgagcaacagaaggaaggaaACTGTGGCTGGCTGCGAAGGGATGGTATCGG-GGACGGGGTGAGACCTCTGGCCGTGGGTGCTCAAATGAAGACCTGGGGCTGCCTAGTGGCTGGAAGCACAGACCAGTTGCGGCAGCTTGACCTCCAGCA-----------AGACAGCTGCTAAGAACAGCTGTGGATTTCGAGATGTGGCTCCAGGGAAT-GGCAAGGGATTCCTCTGGGAATTCTACAGGCAGTGGTCCATGGAAGATGGAAACTCCCTTAGGAAATAGCCTGGAAATGAGACTGCAGATACATGCTAAAGAAGGTGGAAGAACAGTGACCCTAGTACAGGTTTATGGATCTTATCCATAATCTAAGGAAATGGAGGCCAAATGG--------------------CTTTTGAAACTCTAAAATACATGCAGTGGAA---GAGTCA-TGCTTCATGGGAGAACCAGACTCTTACAGGCAGTGAGGCTGCTCCGTGGAGCTCCA-TTCTTCCTACCCATGTCTGTGGTTGGGGATGGGATAAGTGCACAA------ATATGATGCTGATGAGGCCCAAGCATTGTAGGAAAAGAATTTAGCAGCTGCCACAGGAATCTTGAATCCACAGGTGAAAACCTTGACTTTCTTTGGGATCAGTGTGGTCAGGAACAAAGTAAAATCATGGCAAT-AAAAATTGTTCAGTTTTCCAAATATAAGCTCTTTCAAATACTCCAAATTTATCCTCAAAGATTGACATAACTTAGAATAATTTTTATGACAGCAAGGGTGAGAACTAAAACTTAAATTATAAATACAA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2091856 1333 - 8137123 tggcctgat-agacaaacatagca-atgtgtgcctggccacagtggagctgcc---aggcagctgccccacagccgcaggtgttacgtgtttcctgggcagaggacacctgggactgaaatgggcaccatcagtgggtggcGAGCACAGACCTCCAGATGCTGCATGT---------------------------------------------------------------GCATGAAGTATCCCTTGGCCCTC-TGTCTCTTCCTGCCCATATGTAACACGCATGTGCTCTATAATTACCTTTCTACCTGAATATATCTGAA---CAGATCCTGCCTGTATTGTATAAACC-CAAGCACACTCATCTTCTCCAATGTAATTGAATGTTCTCTAA-GCCAAGTCTTATATCAGACTCACACAGCACTAGCGTGAGGGGCTAGGATAGCCTTGCTCTTTCTCACACCCCAGCC---------------TAGTGTTCCCTCCATGGGCTCTCATGAGAGGAGGGAACTCAGAAGAGC----AGTCCTGGG----------------GTAGA------GGTTGACCTTGAAAGATGACTTCAATTTCCTCTGGAGAAGGTGTCAGGGAAGAAATGTGAGGCTGAGAGGACAGTGTGGGCCAAGGAAGGAAGGAAAC--CAGAGTACTGGGAGAGACTGCTGTTGGCACACAAGGCAAGACCTCCAGGCCTGGGTGCTCAGCTGAAGACCTGGGGTTACCTTGTGCCAGGAATTATATGCTAGCTGCAGCAGCATGACCCCCAATA-----------AGGCAGCTGCCGAGGAAAGCTGTGGCTTTGTAGACAGGACTGCAGGAAACAGGCAATGGATGAATCTGGGAATTCTGCAGATGGTGA-CTGTGGAGGATGCAGCTTCTTCCACAAAGCAGGCTGAGAAGGAGACTGCAGAGATACAATAAAGAGGAAGAAAGAACAGTGACCCAAGGATAGGTTTGTGGAGCATATA---GATCTAAAGGAATGGAGGCCAAAAGGTCTTCCTGAAATCTAGCAAATTTTAGAAACTCTGAAATGCATGCAGAAGAAAAGGAGTCACTACCTCAAGGAAGA-CTAGATTCTTA---GCAGTGAAGCCGCACCGCAGAGCTTCGCTCCCTCCTGCTTGTATCTGCCG-TGGGGCTGATGT-ATTGTGTGAGTGAATATGTGATACCAATGAAGTCCAAGCATTGTCAGAAAAAAATTTGGCAACTGGCTCAGAAATCTTGAATTTGTACATAGAGACCTTGACTTTCTTTGGACTAAACATGGCCAAGAACAAAGCAAAATGTTGGCAATAAAAAAATGTTCAGTTTTCTGAATGCAGGCTATTTTAAACACTCCAAATTTCTCCTGAAAGACTGAGATAATTTCAAATAATGTTTATAATAGCAAGAATGATAATTACAACTTAAATTATAAATACTA i otoGar3.GL873611 C 0 I 154 e cerAty1.NW_012002954v1 16863847 0 - 21915920 C e rheMac8.chr3 33897162 0 + 185818997 C e manLeu1.NW_012101810v1 20611 4 - 2515279 I e chlSab2.chr28 4174 0 - 21531802 C e macNem1.NW_012019910v1 4274903 0 - 9440265 C e macFas5.chr3 33513126 0 + 192294377 C e gorGor5.CYUI01015914v1 1256 20920 - 432965 I a score=135198.000000 s hg38.chr3_KI270784v1_alt 84453 202 + 184404 TTTTATTTATAAAAACAAAGTTAGCTTCAAATATTTTATGAACTAGTAGAATTTTAACCTTTTGTCACATTTCCCAGCAAAATAAATAATTCTTTTTTTC-------ACTTCTAGTCTGTCAGAAGAAAAGTCTTAGCTGAAATGGCCAGAAACTCTGAGGCACACTCCGGAGGCTGCTTCCGGGGCACCTCGGCATGG-CCGCTTTTCC s panTro5.chrUn_NW_015975002v1 12414 202 + 14113 TTTTATTTATAAAAACAAAGTTAGCTTCAAATATTTTATGAACTAGTAGAATTTTAACCTTTTGTAACATTTCCCAACAAAGTAAATAATTCTTTTTTTC-------ACTTCTAGTCTGTCAGAAGAAAAGTCTTAGCTGAAATGGCCAGAAACTCTGACGCACACTCCGGAGGCTGCTTCCGGGGCACCTCGGCACGG-CCGCTTTTCC i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 57051 202 + 85365473 TTTTATTTACAAAAACAAAGTTAGCTTCAAATATTTTATGAACTAGTAGAATTTTAACCTTTTGTCACATTTCCCAACAAAGTAAATAATTCTTTTTTTC-------ATTTCTAGTCTGTCAGAAGAAAAGTCTTAGCTGAAATGGCCAGAAACTCTGAGGCACGCTCCGGAGGCTGCTTCCGGGGCACTTCGGCGTGG-CCACTTTTCC i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 383485 208 - 2125214 TTTTATTTATAAAAA-GAAGTTAGCTTCAAATATTTTACGAACTAGTAAAATTTTAACTTTTTGTCACATTTCCCAACAAAGTAAATAATTCTTTTTTTTTTTTTTAATTTCTAGTCTGTCAGAAGAAAAGTCCTAGCTGAAATGGCCAGAAACTGTGAGGTACTCTCCAGAAGCTGCATCCGGGGTACATCAGCATGG-CTGTTTTTCC i cebCap1.NW_016107703v1 C 0 I 37 s otoGar3.GL873611 2093343 196 - 8137123 TTTTATTTATGAAAACAAAATTAGCtttaaatattttat----taatagaattttaa-tttttGTCACATTTCCCAGCAAAATAAGTGCAT-TTTTCTTC-------ATTTGTATTCTGTCAGAAGAAAACTCTTGGCTGACTTGGTCA-AAACTGTAAGTTTTCCTGTGGGGTCTGTCTCCCAGCCACTTCGGCAGGGTCCACTTTCCC i otoGar3.GL873611 I 154 C 0 e cerAty1.NW_012002954v1 16863847 0 - 21915920 C e rheMac8.chr3 33897162 0 + 185818997 C e manLeu1.NW_012101810v1 20611 4 - 2515279 I e chlSab2.chr28 4174 0 - 21531802 C e macNem1.NW_012019910v1 4274903 0 - 9440265 C e macFas5.chr3 33513126 0 + 192294377 C e gorGor5.CYUI01015914v1 1256 20920 - 432965 I a score=4006.000000 s hg38.chr3_KI270784v1_alt 84655 13 + 184404 -ATGCCGGCCCTCA s panTro5.chrUn_NW_015975002v1 12616 13 + 14113 -ATCCCGGCCCTCA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 57253 13 + 85365473 -GTCCTGGCCCTCA i nomLeu3.chr20 C 0 C 0 s otoGar3.GL873611 2093539 14 - 8137123 TTCTCTGACTCTCA i otoGar3.GL873611 C 0 I 9 e cebCap1.NW_016107703v1 383693 37 - 2125214 I e cerAty1.NW_012002954v1 16863847 0 - 21915920 C e rheMac8.chr3 33897162 0 + 185818997 C e manLeu1.NW_012101810v1 20611 4 - 2515279 I e chlSab2.chr28 4174 0 - 21531802 C e macNem1.NW_012019910v1 4274903 0 - 9440265 C e macFas5.chr3 33513126 0 + 192294377 C e gorGor5.CYUI01015914v1 1256 20920 - 432965 I a score=161597.000000 s hg38.chr3_KI270784v1_alt 84668 620 + 184404 CTTGATGCGGTCCAGCAGGGTTGAAATtgtttgaaatgcttgttcccagtgcggtaaagaaatagcacttgaatgtaaatttaatttcctcagcaaggcc------------atttttatttttttttaatttctgcagaaagtgtacactcgccagcagttttgccacaacagtatactgagcaaaggagacagggtcatttataacctgatgcatccaccctactgctgtgtccagtttccagtggctggaacgggacctcacattctgtatttgtcccgattggctagcaatttagaacttttttaaagaggaaaaggcagaggagaacgaaggaaggaggaaataacttgtggaatgctgaaaaaagtaaaaacaccttcgaataaagaagaggaacaggcaatgacctaaagcttgcttggactagtataagcatgccagggcaaatatttaggctaaattgtgggagctaagaacataaagtacattgatttctttattagggctagcagatatttaagaatgttagcacaggtctttgaataaattttgcttctaagagaagttactatttatttctaatgagatgggaaggaaagtctttgaagaggaaactctactttttaca s panTro5.chrUn_NW_015975002v1 12629 620 + 14113 CTTGATGCGGTCCAGCAGGGTTGAAATtgtttgacatgcttgttcccagtgcggtaaagaaatagcacttgaatgtaaatttaatttcctcagcaaggcc------------atttttatttttttttaatttctgcagaaagggtacactcaccagcagttttgccacaagagtatactgagcaaaggagacagggtcatttataacctgacgcatccaccctactgctgtgtccagtttccagtggctggaacgggacctcacattctgtatttgtcccgattggctagcaacttagaacttttttagagaggaaaaggcagaggagaacaaaggaaggaggaagtaacttgtggaatgctgaaaaaagtaaaaacaccttcgaataaagaagaggaacaggcaatgacctaaagcttgcttggactagtataagcatgccagggcaaatatttaggctaaattgtgggagctaagaacataaagtacattgattcctttattagggctagcagatatttaagaatgttagcacaggtctttgaataaattttgcttctaagagaagttactatttatttctaatgagatgggaaggaaagtctttgaagaggaaactctactttttaca i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 57266 628 + 85365473 CTTGACGCGGTCCAGCAGGGTTGAAACtgt----aatgcttgttcccggtgccgtaaagaaatagcacttgaacgtaaatttaatttcctcagcaaggccttttttttttttttttttttttttttttactttctgcagaaagggtacactcgccagcagttttgccacaagagtaaaccgagcaaaggagacagggtcatttataacctgacgcgtccaccctactgctgtgtccgttttccagtggctggaatgggacctcacgttctgtatttgtcccgattggctagcaacttagaacttttttaaagaggacaaggcagaagagaacaaaggaaggaagaagtaacttgtggaatgctgaaaaaagtaaaaacaccttcagataaggaagaggaacaggcaatgacctaatgcttgcttggactggtataagcatgccagggcaaatatttaggctaaattgtgggagctaagaacataaggtacattgatttctttattagggctagcagatatttaagaatgttagcacaggtctttgaataaattttgcttctaagagaagttactatttatttctaatgagatgggaaggaaagtctttgaagaggaacctctactttttaca i nomLeu3.chr20 C 0 C 0 e otoGar3.GL873611 2093553 9 - 8137123 I e cebCap1.NW_016107703v1 383693 37 - 2125214 I e cerAty1.NW_012002954v1 16863847 0 - 21915920 C e rheMac8.chr3 33897162 0 + 185818997 C e manLeu1.NW_012101810v1 20611 4 - 2515279 I e chlSab2.chr28 4174 0 - 21531802 C e macNem1.NW_012019910v1 4274903 0 - 9440265 C e macFas5.chr3 33513126 0 + 192294377 C e gorGor5.CYUI01015914v1 1256 20920 - 432965 I a score=389612.000000 s hg38.chr3_KI270784v1_alt 85288 598 + 184404 GAAGTAGGAACTTAGACTTACAGTTTGCACATTGACAAACTTGTTTTCCTTCCGTACAC----GAGGGGTTTATGATCCTCTGTTGCAACTGATTTGTCTTATGTAACTTCAAGAGTTACTCGTCAACCTA----------CTTAGTATTCTGGACTTTTCGGGAAATGGCAATTTGCCTTCCTATTTAGTGGAAGGGATACTGAGACTGCACTTTTTCTTACGCCAAGAAGTGCACAGTGTCATTGCAATGTCAACATCAGGGAGATCTCAGCCAGTGTGAAATAATTAGATCATCCACTCAAAATTCTTAGTTACATCTTTTTAACATTTTCTTCACACTTCTTAAAAGCAGCTTAACAAGAATtgcattagtcagggttttccagagaaacagaaaagagagaaggagatgtccagaattgtctcatgtgattacagagg-------------------------------------ctagaatccaaggaagagtggcttga-------------------gtccaggggcagaattccctcttcccctgggaggtcagtatttcttcctttaaggccttcaactgattggatgagacccacccacattatggagcataatctgctttactaaaagtatactggcttaaatgctaatttcatct s panTro5.chrUn_NW_015975002v1 13249 598 + 14113 GAAGTAGGAACTTAGACTTACAGTTTGCACATTGACAAACTTGTTTTCCTTCCGTACAC----GAGGGGTTTATGATCCTCTGTTGCAACTGATTTGTCTTATGTAACTTCAAGAGTTACTCGTCAACCTA----------CTTACTATTCTGGACTTTTCGGGAAATGGCAATTTGCCTTCCTATTTAGTGGGAGGGATACTGAGACTGCACTTTTTCTTACCCCAAGAAGTGCACAGTGTCATTGCAATGTCAACATCAGGGAGATCTCAGCCAGTGTGAAATAATTAGATCATCCACTCAAAATTCTTAGTTACATCTTTTTAATATTTTCTTCACACTTCTTAAAAGCAGCTTAACAAGAATtgcattagtcagggttttccagagaaacagaaaagagaggaggagatgtccagaattgtctcgtgtgattacagagg-------------------------------------ctagaatccaaggaagagtggcttga-------------------gtccaggggcagaattccctcttcccctaggaggtcagtatttcttcctttaaggccttcaactgattggatgagacccacccacattatggagcataatctgctttactaaaagtatactggcttaaatgctaatttcatct i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 57894 595 + 85365473 GAAGTAGGAACTTAGACTTACAGTTTGCACATTGACAAACTTGTTTTCCTTCCGTACAT----GAGGGGTTTATGATCCTCTGTTGCAACTGATTTGTCTTATGTAAACTCAAGAGTTACTGGTCAACCTA----------CTTAGTATTCTGGACTTTTTGGGAAATGGCAGTTTGCCTTCCTATTTAGTGGGAGGGATACGGAGACTGCACTTTTTCTTATCCCAAGAAGTGCACAGTGTCATTGCAATGTCACCATCAGGGAGATCTCAGCCAGTGTGAAATAATTAGATCGTCCACTCAAAATTCTTAGTTACATCTTTTTAATATTTTCTTCACAATTCTTGAAAGCAGCTTAACAAGAATtgcattagtcagggttttccagagaaacaaaaaagagaggaggagatgtccagaattgtctggtgtgattacagagg-------------------------------------ctagaaTCCAAGGAAGAGCGGCTT---------------------gtccaggggcagaattccctctt-ccctgggaggtcagtatttcttcctttaaggccttcaactgattggatgagacccacccacactacggcacataacctgctttactaaaagtatgctggcttaaatgctaatttcatct i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 383730 576 - 2125214 GAAGTAGGAACTTAGATTTATGGTTTGCACATTGACAAACTTGTTTTCCTTCTGTATAT----GAGGGGTTTATGATCCTCTGTTGCAACTGATTTGTCGTATGTAAATTCAAGAGTTACTGATCAACCAA----------TTTAGTATTCTGGGCTTTTGAGGAAATGGTAATTTGCCTTCCTAATTAGTAAGAGGGATACTGAGACTGCACTTTTTCTTACTCCAAGAAGTACACAGTATCATTGCAATGCCAACATCAGGAAGATCTTGGTTAGTGCAAAATAATAATGTCACCGAC------------------TCTTTTTACTTTTTTCTTCACACGTCTTGAAAGCAGCTTAACAAGAATtgtattagtcagggttttccagagaaacag----gaGACGAGGAGATGTCCAGGAATGTCTCATGTGATTACAGagg-------------------------------------ctagaatccaaggaagagtggctgga-------------------gtccagaggcagaattctctcttcccttgggaggtcagtatatcttcctttaatgatatcaacagattggatgaggctcacccacattatggagcataatctgctttgctaaatgtatactggcttaaatgctaatttaatct i cebCap1.NW_016107703v1 I 37 C 0 s otoGar3.GL873611 2093562 641 - 8137123 GAAGCAGGGACTTAGA------GCTTGCCCGTTGACAAATGTCTTTTTCTTCAGTTCGTTGTGTAAGGGTTTATGATCCCTTGTTGCAATTGACTTGTCTCATGTAAATTAATGAATTA-TGGTTAACTAATAGCCATATTTTTAATATTCTGAACTTTTCAGGAAATGATAATTTTCCTTCCTAAAAAGTAGGAAGGATAGTGAGACTACGCTTTTTCTTATCCCAAGAAGTGCGTAGTATCTTTGCAATGCCAGGGCAAGGCAAATCTCAGCCAATATGAAATGACAAAATTACCCGTTCAAAATTCTTGATTATATTCACTTTGTATTTTCTTCACACTTCTTCAAAGAAGCTTAATAGGAATTGCCttagtccaggttctccagagaaacagaagagaaagggagagattttgaggattggcttgtgagattatggaagatggcaagtctcaggtctacagggcaggtcagctaaccagggacccagggaagagttggtggacccagctcagtctctagctatctattggcagaattccctctt--------------------tttttctgaaggtctccaattaattggatgaggctcacccacactatggagagtaatctgctttactcaaactatgatggtttaaacattaattacatct i otoGar3.GL873611 I 9 I 47 e cerAty1.NW_012002954v1 16863847 0 - 21915920 C e rheMac8.chr3 33897162 0 + 185818997 C e manLeu1.NW_012101810v1 20611 4 - 2515279 I e chlSab2.chr28 4174 0 - 21531802 C e macNem1.NW_012019910v1 4274903 0 - 9440265 C e macFas5.chr3 33513126 0 + 192294377 C e gorGor5.CYUI01015914v1 1256 20920 - 432965 I a score=131704.000000 s hg38.chr3_KI270784v1_alt 85886 266 + 184404 gaaaaataccacagaataatg-ttgaccaagtactgggAGAGGCCTTTTCCTTCATCTTTTGGTAAATTGCAATCCCTGGGTATATTCACATTTGAAACTCAAATGTGGGCATTGGCTACTGCAGGCCTTTCCCGGCTCAATGGAGTGCAGACAGGGGAGGCACAGGAGTGACTCCACTGTGTGAAGAGAAGACTGATGAGGGCCCGTGTGGCACCTCAGGTAGGGTCTGCACTGTCTGGACTATGGTCAGGCCCCTGCCTGAGCCA s panTro5.chrUn_NW_015975002v1 13847 266 + 14113 gaaaaataccacagaataatg-ttgaccaagtactgggAGAGGCCTTTTCCTTCATCTTTTGGTAAACTGCAATCCCTGGGTATATTCACATTTGAAACTCAAATGTGGGCATTGGCTACTGCAGGCCTTTCCCGGCTCAATGGAGTGCAGACAGGGGAGGCACAGGAGTGACTCCACTGTGTGAAGAGAAGACTGATGAGGGCCCGTGTGGCACCTCAGGTAGGGTCTGCACTGTCTGGACTATGGTCAGGCCCCTGCCTGAGCCA i panTro5.chrUn_NW_015975002v1 C 0 N 0 s nomLeu3.chr20 58489 266 + 85365473 gaaaaataccacagaataatg-ttgaccaagtactgggAGAGGCCTTTTCCTTCACCTTTTGGTAAATTGCAATCCCTGGGTATATTCACATTTGAAACTCACATGTGGGCATTGGCCACTGCAGGCCTTTCCCGGCTCAACGGAGTGCGGACAGGGGAGGGGCAGGAGTGATGCAACTGTGTGAAGAGAAGACTGATGAGGGCCCATGTGGCACCTCAGGTAGGCTCTGCACTGTCTGGACTACGGTCAGGCCCCTGCCTGAGCCA i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 384306 265 - 2125214 gaaaaatatcacagactaatgtttgaccaagtactgggAGAGGTCTTTTCATTCATCTTTTGGTAAATTGCAATCCCCGGG--TATTCACATTTAAAACTCAAATGTGGGTGTTGGCCACAGCAGGCCTTCCCCTGCTCCATGGAGTGCAGATGGGGTAGGCACAGGAGTGACTTTACTGTGTGAAAAGAAGACTGAAGAGGGCCCACATGACACCTCAGGCAGGGTCTGCACTGTCTGGACTATGATCAGGCCCCTGCCTGAGCCA i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2094203 47 - 8137123 I e cerAty1.NW_012002954v1 16863847 0 - 21915920 C e rheMac8.chr3 33897162 0 + 185818997 C e manLeu1.NW_012101810v1 20611 4 - 2515279 I e chlSab2.chr28 4174 0 - 21531802 C e macNem1.NW_012019910v1 4274903 0 - 9440265 C e macFas5.chr3 33513126 0 + 192294377 C e gorGor5.CYUI01015914v1 1256 20920 - 432965 I a score=104414.000000 s hg38.chr3_KI270784v1_alt 86152 476 + 184404 GCCCTGCTCTCCAGTGTCCCCAAGGAATCCCTGAAACTAGCATCTCATGGAGGAGATAGACGATGCAGGAGGTCCCCTGTGCCCAGAACAAATGGTACAACAAGG-CCCTCTGTTCCCCAAACTGGTCTCAGCAAACTTTCCCCACAGCTTGGATCTGGGCAGGTCACAGGGCCCAAACCTCATGACCAGCAGTGCTGGACCAGG-GGGCTAGAAGGGCAGGTGGAGCTCTCTGACGACATTGTGGAGAGGAGGGGTGCCAGGCAAGGGGTGTCCAGGCAGGGGGTGTCCAGGATACTGTCCTGAGAGCCTCTCCAGGGACAGATGCCCTTAGGGGCAGAGAAAAA---GGCAACCGGGGAGACCAGAGGAGTCTGATGCAGATAAGGAGGGGCTCTGTCCAGTGATGTTTCTCCACAATGAGCTCTCCCGAGGACAAGCAGCCTGCTTTATAGGCTAACCCCACTGCACAGTGAGAAGAC s nomLeu3.chr20 58755 478 + 85365473 GCCCTCCTCTCCAGAGTCCCCAAGGAATCCCTGAAACTAGCATCTCATGGAGGAGACAGATGACGCAGGAGGTCCCCTGGGTCCAGAACAAATGGTACAACATGGCCCCTCTGTTCCCCAAACTGGTCTCAGCAAACTTTCCCCACAGCTTGGATCTGGGCAGGTCACAGGGCCCAAACCTCAGGACCAGCAGTACTGGACCAGGTGGGCTAGAAGGGAAGGCAGAGCTGTCTGACGACATTGTGGAGAGGAGGAGTGCCAGGCAAGGGGTGTCCAGGCAAGGGGTGTCCAGGATGCTGTCCTGAGAGCCTCTCCAGGGACAGGCGCCCTTAGGGGCAGAGAAAAA---GGCAACAGGGGAGACCAGAGGAGTCTGATGCAGATAAGGAGGGGCTCTGTCCAGTGATGTTTCTCCGCAATGAGCTCTCCCAAGGGCATGCAGCCTGCTTTATAGGCAAACCCCATTGCACAGTGAGAAGAC i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 384571 454 - 2125214 GCCCTGCTCTCCCATGTCCCCAAGGAATCCCTGAAAGTAGCATCCCATGGAGGAGAGCGATGATGCAGGAAGTCCCCTGGGCTCAGGATAAATGGTACAACATGGCCCCTCCCATCCCCAAACTGGTCTCAGCAAACTTTCCCCAAAGCCTGGAT------------CAGGGCCCAAACCTCAGGATCAGCAGTGAGGGACCAGCCGGGCTAGAAGGGCAGGCAAAGCTGCCTGAAGACATTGTGGAAATGAGGGATGTCAGGCAA---------------GGGGTGTCCAGGATGCTGTCCTGAGAGCCTCTCCAGGGACAGGTGCCCTTAGGGGCAGAGAAAAAGGCGGCAGCAGGGGAGACTGGAGGAGTCTGATACAGATGAAGAGGGGCTGTGTCCAGTGATGTTTCTCCACAATGATCTCTCCCTGGGGTGTGCAGTCTGCTTTACAGGCGAATCTCACTGCACAGAGAGAAGAC i cebCap1.NW_016107703v1 C 0 I 206 e otoGar3.GL873611 2094203 47 - 8137123 I e cerAty1.NW_012002954v1 16863847 0 - 21915920 C e rheMac8.chr3 33897162 0 + 185818997 C e manLeu1.NW_012101810v1 20611 4 - 2515279 I e chlSab2.chr28 4174 0 - 21531802 C e macNem1.NW_012019910v1 4274903 0 - 9440265 C e macFas5.chr3 33513126 0 + 192294377 C e gorGor5.CYUI01015914v1 1256 20920 - 432965 I a score=850.000000 s hg38.chr3_KI270784v1_alt 86628 11 + 184404 GAAGACTTCGG s nomLeu3.chr20 59233 11 + 85365473 GAAGCCTTCGG i nomLeu3.chr20 C 0 C 0 e otoGar3.GL873611 2094203 47 - 8137123 I e cebCap1.NW_016107703v1 385025 206 - 2125214 I e cerAty1.NW_012002954v1 16863847 0 - 21915920 C e rheMac8.chr3 33897162 0 + 185818997 C e manLeu1.NW_012101810v1 20611 4 - 2515279 I e chlSab2.chr28 4174 0 - 21531802 C e macNem1.NW_012019910v1 4274903 0 - 9440265 C e macFas5.chr3 33513126 0 + 192294377 C e gorGor5.CYUI01015914v1 1256 20920 - 432965 I a score=39458.000000 s hg38.chr3_KI270784v1_alt 86639 180 + 184404 AACTCAGTTCCCTAGAACCTCTTCTCTCCCTGCATAGTCCGGCCCTATTGGTCCCTTCTGGTCTTGAAGGTCTTTAATGGAAACAAACCGCAAGGCCAAGGCCAGACCTGCCTGCC-CTTCATGCCCATCTCCACGCAGCAGTTGAGTGTGGACTCTGCCTCCCCTGTCCCCCGAACAGTG s nomLeu3.chr20 59244 179 + 85365473 AACTCAGTTCCCTAGAACCTCTTCTCTCCCTGCGTAGTCCGGCCCCATTGGTCCCTTCTAGTCTTGAAAGTCTTTATTGGAAACAAACCACAAGGCCAAGGCCAGACCTGCCTGCC-CTTCATGCCCACCCCTGCGCAGCAG-CGAGTGTGGACTCTGCCTCCCCAGTCCCCCGAACAGTG i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 385231 179 - 2125214 AACTCAGTTTCCTAGAAGCTTTTCTCTCCCTGCATAGGCCAGCCCTGTGGGTCCCTTCTGGTCTTTAAGGTCTTTCTTGGAAACAAACCACAAGGCCAAGGCCAGATCTGCCTGCCTCCTCATGCCCACCCCTGGGCAGTAG-AGAGTGTGGACTCTGCTTCCCATG-CCCCTGACCAGTG i cebCap1.NW_016107703v1 I 206 C 0 e otoGar3.GL873611 2094203 47 - 8137123 I e cerAty1.NW_012002954v1 16863847 0 - 21915920 C e rheMac8.chr3 33897162 0 + 185818997 C e manLeu1.NW_012101810v1 20611 4 - 2515279 I e chlSab2.chr28 4174 0 - 21531802 C e macNem1.NW_012019910v1 4274903 0 - 9440265 C e macFas5.chr3 33513126 0 + 192294377 C e gorGor5.CYUI01015914v1 1256 20920 - 432965 I a score=18126.000000 s hg38.chr3_KI270784v1_alt 86819 50 + 184404 AGTCCCCACCAGCCCCTCCAGGGACACAGTGCCA-GCTCTGCAGCCCTCCC s nomLeu3.chr20 59423 50 + 85365473 AGTCCCCACCAGCCCCTCCAGGGACATAGTGCCA-GCTCTGCAGTCCTCCC i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 385410 51 - 2125214 AGTCTTCATCAGCCCCTATGGGGACACAGTGCCAGGCTGTGCAGCCCTCCC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2094250 51 - 8137123 AGCCCCCGTCAGCCCCTCCAAGGACATAGGGGCATGCCACACTGCCCTCTC i otoGar3.GL873611 I 47 C 0 e cerAty1.NW_012002954v1 16863847 0 - 21915920 C e rheMac8.chr3 33897162 0 + 185818997 C e manLeu1.NW_012101810v1 20611 4 - 2515279 I e chlSab2.chr28 4174 0 - 21531802 C e macNem1.NW_012019910v1 4274903 0 - 9440265 C e macFas5.chr3 33513126 0 + 192294377 C e gorGor5.CYUI01015914v1 1256 20920 - 432965 I a score=1455448.000000 s hg38.chr3_KI270784v1_alt 86869 428 + 184404 GTCCCTCTGTCCATTCTTCTGCAGGCAGGATGGGCACTGTGGCTGGAGGAAGGCTCCTGATCCACTGCTTTGGGGGAA---TCTGATTTAGCACTCTACAGGGAACCCAACAGAGATCCAAAGCTGAGTACTGATTCAGAGAAAGAACATTTCTGCTAAGCTTAGGGCCTCAGGGAGGACAGATAATTATCTAAAGTTGACAGAACAATCAATTTTCTGGGTCTGAAGTTTACAAACAAAATCCCTCTCCTTTGAAGGCAGATTAGCCATGGAAACACCTTCTACATT-GCCTGCCTAAATGGTTTGTCTCTGCAATCAATCTCTCTATTCTTTAAAACAGAATTAGGATAATTTGCATAATTGTTTCTTGTCTCAGAGAAATCTTACGGGGAGGCTGTCTCCAGACAACCAGCAGCCTGGGCTCCAGG------------ACG---------------------- s nomLeu3.chr20 59473 442 + 85365473 ATCCCTCTGTCCATTCTTCTGCAGGCAGGATGGGCACCGTGGCTGGAGGAAGGCTCCTGATCCACTGCTTTGCGGGAA-TCTCTGATTTAGCGCTCCACAGGAAACCCAACAGAGATCCAAAGCTGAGTACTGATTCAGAGAAAGAACATTTCTGCTAAGCTTAGGGCCTCAGGCAGGACAGGTAATTATCTAAAGTTGACAGAACAATCAATTTTCTGGGTCTGAAGTTTACAAACAAAATCCCTCTCCTTTGAAGGCAGATTAGCCATGGAAACACCTTCTACATT-GCCTGCGTAAATGGTTTGTCTCTGCAATCAATCTCTCTATTCTTTAAAACAGAATTAGGATAATTTGCATAATTGCTTCTTGTCTCAGAGAAACCTTACGGGGAGCCTGTCTTCAGATAACCAGCAGCCTGGGCTCCAGGCTGGGTTGTTTCCTG---------------------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33897162 428 + 185818997 GTCCCTCTGTCCATTTTCCTGCAGGCAGGGTGGACACTGTGACTGGAGGAAGGTTCCTGATCCACTGCTTTGGGGGGAATCTCTGATTTAG-ACTCCACAGGGAACCCAACAGAGATCCAAAGCC-AGTACTGATTCAGAGAAAGAACATTTCTGCTAAGCTTAGTGCCTCAGGGAGGACAGATAATTACCTAAAGTTGACAGAACAATCAATTTTCCGGGTCTGAAGTTTACAAACAAAATCCCTCTCCTTTGAAGGCAGATTAG-CGTGGAAACACCTTCTGCATT-GCCTGCGTCAATGGTCTGTCTCTTCAATCAATCTCTCTATTCTTTAAAACAGAATTAGGATAATTTGCATAATTGTTTCTTGTCTCAGAGAAATCTTACGGGGAGGCTGTCTTCAGATAACCAGCAGCCTGGGCTCCAGG------------CTG---------------------- i rheMac8.chr3 C 0 I 2 s macFas5.chr3 33513126 428 + 192294377 GTCCCTCTGTCCATTCTCCTGCAGGCAGGGTGGACACTGTGACTGGAGGAAGGTTCCTGATCCACTGCTTTGGGGGGAATCTCTGATTTAG-ACTCCACAGGGAACCCAACAGAGATCCAAAGCC-AGTACTGATTCAGAGAAAGAACATTTCTGCTAAGCTTAGTGCCTCAGGGAGGACAGATAATTACCTAAAGTTGACAGAACAATCAATTTTCCGGGTCTGAAGTTTACAAACAAAATCCCTCTCCTTTGAAGGCAGATTAG-CGTGGAAACACCTTCTGCATT-GCCTGCGTCAATGGTCTGTCTCTTCAATCAATCTCTCTATTCTTTAAAACAGAATTAGGATAATTTGCATAATTGTTTCTTGTCTCAGAGAAATCTTACGGGGAGGCTGTCTTCAGATAACCAGCAGCCTGGGCTCCAGG------------CTG---------------------- i macFas5.chr3 C 0 I 2 s macNem1.NW_012019910v1 4274903 427 - 9440265 GTCCCTCTGTCCATTCCCCTGCAGGCAGGGTGGACACTGTGACTGGAGGAAGGTTCCTGATCCACTGCTTTGGGGGGAATCTCTGATTTAG-ACTCCACAGGGAACCCAACAGAGATCCAAAGCC-AGTACTGATTCAGAGAAAGAACATTTCTGCTAAGCTTAGTGCCTCAGGGAGGACAGATAATTACCTAAAGTTGACAGAACAATCAATTTT-CGGGTCTGAAGTTTACAAACAAAATCCCTCTCCTTTGAAGGCAGATTAG-CGTGGAAACACCTTCTGCATT-GCCTGCGTCAATGGTCTGTCTCTTCAATCAATCTCTCTATTCTTTAAAACAGAATTAGGATAATTTGCATAATTGTTTCTTGTCTCAGAGAAATCTTACGGGGAGGCTGTCTTCAGATAACCAGCAGCCTGGGCTCCAGG------------CTG---------------------- i macNem1.NW_012019910v1 C 0 I 6 s cerAty1.NW_012002954v1 16863847 428 - 21915920 GTCCCTCTGTCCATTCTCCTGCAGGCAGGGTGGACACTGTGACTGGAGGAAGGCTCCTGATCCACTGCTTTGGGGGGAATCTCTGATTTAG-ACTCCACAGGGAACCCAACAGAGATCCAAAGCC-AGTACTGATTCAGAGGAAGAACATTTCTGCTAAGCTTAGTGCCTCAGGGAGGACAGATAATTACCTAAAGTTGACAGAACAATCAATTTTCTGGGTCTGAAGTTTACAAACAAAATCCCTCTCCTTTGAAGGCAGATTAG-CGTGGAAACACCTTCTGCATT-GCCTGCGTCAATGGTCTGTCTCTTCAATCAATCTCTCTATTCTTTAAAACAGAATTAGGATAATTTGCATAATTGTTTCTTGTCTCAGAGAAATCTTACGGGGAGGCTGTCTTCAGATAACCAGCAGCCTGGGCTCCAGG------------CTG---------------------- i cerAty1.NW_012002954v1 C 0 I 2 s chlSab2.chr28 4174 428 - 21531802 GTCCCTCTGTCCATTCTCCTGCAGGCAGGGTGGACACTGTGGCTGGAGGAAGGCTCCTGATCCACTGCTTTGGGGAGAATCTCTGATTTAG-ACTCCACAGGGAACCCAACAGAGATCCAAAGCC-AGTACTGATTCAGAGAAAGAACATTTCTGCTAAGCTTAGTGCCTCAGGGAGGACAGATAATTACCTAAAGTTGACAGAACAATCAATTTTCTGAGTCTGAAGTTTACAAACAAAATCCCTCTCCTTTGAAGGCAGATTAG-CGTGGAAACACCTTCTGCATT-GCCCGCGTCAATGGTCTGTCTCTGCAATCAATCTCTCTACTCTTTAAAACAGAATTAGAATAATTTGCATAATTGTTTCTTGTCTCAGAGAAATCTTACGGGGAGGCTGTCTTCAGATAACCAGCAGCCTGGGCTCCAGG------------CTG---------------------- i chlSab2.chr28 C 0 I 2 s manLeu1.NW_012101810v1 20615 428 - 2515279 GTCCCTCTGTCCATTCTCCTGCAGGCAGGGTGGACACTGTGACTGGAGGAAGGCTCCTGATCCACTGCTTTGGGGGGAATCTCTGATTTAG-ACTCCACAGGGAACCCAACAGAGATCCAAAGCC-AGTACTGATTCAGAGAAAGAACATTTCTGCTAAGCTTAGTGCCTCAGGGAGGACAGATAATTACCTAAAGTTGACAGAACAATCAATTTTCTGGGTCTGAAGTTTACAAACAAAATCCCTCTCCTTTGAAGGCAGATTAG-CGTGGAAACACCTTCTGCATT-GCCTGCGTCAATGGTCTGTCTCTTCAATCAATCTCTCTATTCTTCAAAACAGAATTAGGATAATTTGCGTAATTGTTTCTTGTCTCAGAGAAATCTTACGGGGAGGCTGTCTTCAGATAACCAGCAGCCTGGGCTCCAGG------------CTG---------------------- i manLeu1.NW_012101810v1 I 4 I 2 s cebCap1.NW_016107703v1 385461 427 - 2125214 ATCCCTCTGTCCTTTCTTCTGCAGGCAGGATGGACAC--TGGCTGGAGGAAGCCTCCTGGTCCACTGCTTTGGGGGAA-TCTCTGACTTAGCACTCCACAGAGAACCCAGCAGAAATCCAAAGCT-GAGACTCATTCAGAGAAAGAACATTTCTGCTAAGCTTAGTGCCTCAGGGGGGACAGATAATTGTCTAAAGTTGGCAGAACAATCAGTTTTCTGGGTCTGAAGTTTACAAACAAAATCCCTCCCCTTTGAAGGCAGGTTAGCAATGGAAACATCTTCTTCATT-GCCTATATAAATGGTTTGTCTCTGCAGTCAATTTCCCTATTCTTTAAAACAGAAATAGGATAAATTGCATAATTGCTTCTTGTCTCAGAGAAATCTCACTGGGAAGCTGTCTTCAGATAACCAGCAGCCTGGGCTCCAGG------------CTT---------------------- i cebCap1.NW_016107703v1 C 0 I 12 s otoGar3.GL873611 2094301 410 - 8137123 GTCCTTCTGC-----------AAGGCAGGATGGACACTGCTGCTGGACACAGGCTCCTGATCCACTCCTTCAGGATAG---TCTGCATTAG--CTTCACACGGGACCAGGCAGA-ATGCGAAGCTGAGCCCTGACTCAGAGAAAGAACA-CTCTGCTAAGTTTAGTGCTGCGGGGAGGACAGATAATTATCGCACA--GGCAGCGCAATCAATTTTCTGTGTGTGAAGTTTACAAACAAAATCTCTCT-TTGTGAAGACAGATTAGCATTGGAAACACCTTCTACATCAGTCTGTATAAATGGTTTGTCTCTGCAATTCATCTCTCTA---TTTACAACA---------------GCATAAATGTTTCTTGTCTC--AGAAATCTGAGCGGGATGTTGTCTTCAGGTAAC---TAGCCCGGGCTCCAGC------------TTGCGCCAGCAGAGGGAAAGTCACG i otoGar3.GL873611 C 0 C 0 e gorGor5.CYUI01015914v1 1256 20920 - 432965 I a score=-12636.000000 s hg38.chr3_KI270784v1_alt 87297 8 + 184404 ------------ACGCCAAA------- s nomLeu3.chr20 59915 8 + 85365473 ------------AGGCCAAA------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33897592 4 + 185818997 ------------TTGT----------- i rheMac8.chr3 I 2 C 0 s macFas5.chr3 33513556 4 + 192294377 ------------TTGT----------- i macFas5.chr3 I 2 C 0 s cerAty1.NW_012002954v1 16864277 4 - 21915920 ------------TTGT----------- i cerAty1.NW_012002954v1 I 2 C 0 s chlSab2.chr28 4604 4 - 21531802 ------------TTGT----------- i chlSab2.chr28 I 2 C 0 s manLeu1.NW_012101810v1 21045 4 - 2515279 ------------TTGT----------- i manLeu1.NW_012101810v1 I 2 C 0 s cebCap1.NW_016107703v1 385900 8 - 2125214 ------------AGGCCAAA------- i cebCap1.NW_016107703v1 I 12 C 0 s otoGar3.GL873611 2094711 27 - 8137123 ATGAAAGAGCTGATTTCAGAGAACAAA i otoGar3.GL873611 C 0 C 0 e macNem1.NW_012019910v1 4275330 6 - 9440265 I e gorGor5.CYUI01015914v1 1256 20920 - 432965 I a score=1454462.000000 s hg38.chr3_KI270784v1_alt 87305 488 + 184404 CCCACAGGCAGCCTTGCGGTAag---------------------------gctccaggctctagagccaaagg-ctctaggtcagaggctcCA----CCTGGGACCCCTGCGCCCTCCCTGCCAGGGCGGCAGAGGGAGCCACATCCCTGAAAGCCTCTGGCTTAGGGACCTCAGAATTCCCACCTCTGATAAGGTAATGAAATGAGCCAAGGTTGGTAAAAATCTGTGAACAAACTGGCCTACAGTGGCTAAAACCAGAGGGAGAAAAATAATGTGATAAACCCCC-AAACCAGCCATCCTGGGAA-----GT----TTCAAGGGGC-------GGCTGCACTCCTGACT---------------CCTCCCCAGCCTCCTGGAGCTGCCCAGGTGAGCAGACAGAGTTTTG----AGAGCTG-----------------------------GTACTGAG----------------ACTCTGTGCCTGGAGAC--AGACACTGGGCAGGGACCCTCAACTTTCCTGTCCGTTTTGCGCAGAGAG------TCAGAAACAG--ATGCTGGGGAGCAGCCAGCAAGCAGAGGGCTGCCTGTCTCAGAGGCAGG s nomLeu3.chr20 59923 480 + 85365473 CCCAGAGGCAGCCTTGC-ATAag---------------------------gctccaggctctacagccaaagg-ctctaggtcagaggctcCG----CCTGGGGCTCCTGCACCCTCCCTGCCAGGGCGGCAGTGGGAGCCACATCCATGAAAACCTCTGGCTTAGGGACCTCAGAATTCCCACCTCTGATAAGTCAATGAAATGAGCCAAAGTTGGTAAAAATCTGTGAACAAACGGGCCTACAGTGGCTAAAACCAGAGGGAGAAAAATAATGTGATAAACCCCCAAAACCAGCCATCCTGGGAA-----GT----TTC--GGGGC-------TGCTGCGCTCCTGACT---------------CCTCCCCCGCCTCCTGGAGCTGCCCAGGTGAGCAGACAGAGTTTTG----AGAGCTG-----------------------------GTACTGAG----------------ACTCTGTGCCTGGAGAC--GGACACTGGGCAGGAACCCTCAACTTTCCTGTCCTTTTTGCGCAGTGAG------TCAGAAACAG--ATTCTGGGGA------AGCAAGCAGAGGGCTGCCTGTCTCAGAGGCAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33897596 483 + 185818997 TTCGCAGGCAGCCTTGCAGCGAG---------------------------GCTCCAGGCTCTAGAGCCAAAGG-CCTTAGGTCAGAGGCTCCA----CCTGGGGCTCCTGGGCCCTCCCTGCCAGGGCCACAGTGGGAGCCATATCCATGAAAGCCTCTGGTTTAGGGACCTCAGAATTCTCCCCTCTGATAAGTTAATGAAATGAGCCGAAGTTGGTAAAACTCTGTGAACAAACTGGCCTACAGTGGCTAAAACTGGAGGGAGAAAACTAATGTGATAACCCCCA-AAACCAGCCACCCTGGGAA-----GT----TTCAGGGGGC-------TGCTGCACTCCTGGCT---------------CCTCCCCCGCCTCCTGCAGCTGCCCAGGTGAGCAAATGGAGCTTTG----AGAGCTG-----------------------------GTGCTGAG----------------ACTCTGTGCCTGGAGAC--AGACACTGGACGGGAACCCTCAACTTTCCTGTCCTTTTTGC---CAGAG------TTGGAAAC----ATGCTGGGGAACAGCGGGCAAGCAGAGGATTGTCTGTCTCAGACGCAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33513560 483 + 192294377 TTCGCAGGCAGCCTTGCAGCGAG---------------------------GCTCCAGGCTCTAGAGCCAAAGG-CCTTAGGTCAGAGGCTCCA----CCTGGGGCTCCTGGGCCCTCCCTGCCAGGGCCACAGTGGGAGCCACATCCATGAAAGCCTCTGGTTTAGGGACCTCAGAATTCTCCCCTCTGATAAGTTAATGAAATGAGCCGAAGTTGGTAAAACTCTGTGAACAAACTGGCCTACAGTGGCTAAAACTGGAGGGAGAAAACTAATGTGATAACCCCCA-AAACCAGCCACCCTGGGAA-----GT----TTCAGGGGGC-------TGCTGCACTCCTGGCT---------------CCTCCCCCGCCTCCTGCAGCTGCCCAGGTGAGCAAATGGAGCTTTG----AGATCTG-----------------------------GTGCTGAG----------------ACTCTGTGCCTGGAGAC--AGACACTGGACGGGAACCCTCAACTTTCCTGTCCTTTTTGC---CAGAG------TTGGAAAC----ATGCTGGGGAACAGCGGGCAAGCAGAGGATTGTCTGTCTCAGACGCAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4275336 483 - 9440265 TTCGCAGGCAGCCTTGCAGCGAG---------------------------GCTCCAGGCTCTAGAGCCAAAGG-CCTTAGGTCAGAGGCTCCA----CCTGGGGCTCCTGGGCCCTCCCTGCCAGGGCCACAGTGGGAGCCACATCCATGAAAGCCTCTGGTTTAGGGACCTCAGAATTCCCCCCTCTGATAAGTTAATGAAATGAGCCAAAGTTGGTAAAACTCTGTGAACAAACTGGCCTACAGTGGCTAAAACTGGAGGGAGAAAACTAATGTGATAACCCCCA-AAACCAGCCACCCTGGGAA-----GT----TTCAGGGGGC-------TGCTGCACTCCTGGCT---------------CCTCCCCCGCCTCCTGCAGCTGCCCAGGTGAGCAAATGGAGCTTTG----AGAGCTG-----------------------------GTGCTGAG----------------ACTCTGTGCCTGGAGAC--AGACACTGGACGGGAACCCTCAACTTTCCTGTCCTTTTTGC---CAGAG------TTGGAAAC----ATGCTGGGGAACAGCGGGCAAGCAGAGGATTGTCTGTCTCAGACGCAGG i macNem1.NW_012019910v1 I 6 C 0 s cerAty1.NW_012002954v1 16864281 483 - 21915920 TTCGCAGGCAGCCTTGCAGCGAG---------------------------GCTCCAGGCTCTAGAGCCAAAGG-CCTTAGGTCAGAGGCTCCA----CCTGGGGCTCCTGGGCCCTCCCTGCCAGGGCCACAGTGGGAGCCACATCCATGAAAGCCTCTGGTTTAGGGACCTCAGAATTCCCCCCTCTGATAAGTTAATGAAATGAGCCGAAGTTGGTAAAACTCTGTGAACAAACTGGCCTACAGTGGCTAAAACTGGAGGGAGAAAACTAATGTGATAACCCCCA-AAACCAGCCACCCTGGGAA-----GT----TTCAGAGGGC-------TGCTGCACTCCTGGCT---------------CCTCGCCCGCCTCCTGCAGCTGCCCAGGTGAGCAAATGGAGCTTTG----AGAGCTG-----------------------------GTGCTGAG----------------ACTCTGTGCCTGGAGAC--AGACACTGGACGGGAACCCTCAACTTTCCTGTCCTTTTTGC---CAGAG------TTGGAAAC----ATGCTGGGGAACAGCGGGCAAGCAGAGGATTGTCTGTCTCAGACGCAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 4608 480 - 21531802 TTCGCAGGCAGCCTTGCAGCGAG---------------------------GCTCCAGGCTCTAGAGCCAAAGG-CCTTAGGTCAGAGGCTCCA----CCTGGGACTCCTGGGCCCTCCCTGCCAGGGTCGCAGTGGGAGCCACATCCATGAAAGCCTCTGGTTTAGGGACCTCAGAATTCCCCCCTCTGATAAGTTAATGAAACGAGCC---GTTGGTAAAACTCTGTGAACAAACTGGTCTACAGTGGCTAAAACTGGAGTGAGAAAACTAATGTGATAACCCCCA-AAACCAGCTACCCTGGGAA-----GT----TTCAGGGCGC-------TGCTGCACTCCTGGCT---------------CCTCCCCCGCCTACTGCAGCTGCCCAGGTGAGGAAATGGAACTTTG----AGAGCTG-----------------------------GTGCTGAG----------------ACTCTGTGCCTGGAGAC--ACACACTGGACGGGGACCCTCAACTTTCCTGTCCTTTTTGC---CAGAG------TTGGAAAC----ATGCTGGGGAACAGCAGACAAGCAGAGGATTGTCTGTCTCAGATGCAGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 21049 483 - 2515279 TTCGCAGGCAGCCTTGCAGCGAG---------------------------GCTCCAGGCTCTAGAGCCAAAGG-CCTTAGGTCAGAGGCTCCA----CCTGGGGCTCCTGGGCCCTCCCTGCCAGGGCCACAGTGGGAGCCACATCCATGAAAGCCTCTGGTTTAGGGACCTCAGAATTTCCCCCTCTGATAAGTTAATGAAATGAGCCGAAGTTGGTAAAACTCTGTGAACAAACTGGCCTACAGTGGCTAAAACTGGAGGGAGAAAACTAATGTGATAACCCCCA-AAACCAGCCACCCTGGGAA-----GT----TTCAGGGGGC-------TGCTGCACTCCTGGCT---------------CCTCCCCTGCCTCCTGCAGCTGCCCAGGTGAGCAAATGGAGCTTTG----AGAGCTG-----------------------------GTGCTGAG----------------ACTCTGTGCCTGGAGAC--AGACACTGGACGGGAACCCTCAACTTTCCTGTCCTTTTTGC---CAGAG------TTGGAAAC----ATGCTGGGGAACAGCGGGCAAGCAGAGGATTGTCTGTCTCAGAGGCAGG i manLeu1.NW_012101810v1 C 0 C 0 s cebCap1.NW_016107703v1 385908 483 - 2125214 CCCACAGGCAGCCTTGCAGTGAA---------------------------GCTCCAGTCTCTTGAGCCAAAGG-CCCTAGATCAAAGCCTCCA----CCTGGGGCTCCTGTGCCCTCCCTGCCAGCGTGGCAGTGGGAGCCACATCCCTGAAAGCCTCTGGATTAGGGACCTCAGAACTCCCACCTCTGATGAGTTAATGAAATGAACCAAAGTTGGCAAAAATCTGTGAACAAACTGACCTACAGTGGCTAAAATCAGAAGGAGAAAACTAACATGATAAACCTCAAAAACCAGCCATCCTGGGAAGTAAGGT----GACAAGGGGC-------TGCTGTGCTCCTGAGT---------------CCTCCCCCACCTCCTGGAGCTCCCCAGGTGAGCAGACAGAGTCTT--------------------------------------------TTTAG----------------ACTCTGTACCTGGAAAG--AGACACTGGGTGGGCACCCTCAACTTTCCTGTCCTTTTTGCACAGTGAG------TCAGAAACAG--ATGCTAGGGAGCAGCCAGCAAGCAAAGGACTGTCTGTCTCAGATGCAGA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2094738 584 - 8137123 CCAACAGGCAGCCATG--GTGAGTGGAGCAACCCAGGGGCCGCCTCAGCAGCTCCAGGTCCTAGAGCTGCAGGCCCCTTTGTCAGAGGAGTCACCTCCCTGAGGCTCTGCGAACCTCTCTACCATGTCCA---TGAAAGCTCCTT-------AGCCTCTGTCTTGGGAACCTCTGAATCCCTACCT-TGATAAGTTAATAAAATGAGCCAAAGATGGCAAAAATCAGTGAAAAAACCGGCCTGTGTTAGCGAAAGTAAGAAGGGGAAAGCTAATGTGATGGACTTCT--AACTGCAAGTCCTATAAA-----GTAAGATTAAAGAGAAAACACTgggcagcacctgtggctcaaaggagtagggcgccggtcccatatcctggaggtggcaggtt---caaacccagccccggccaaaaactgcaaaaaaaAAAAAAGGAGAAAACCCTGCCCTGCCAGGCTCCTATTCCTCCCCTGCTCAGTGCCCAGAGACAGAGAAACTGGGTACGCA-CCTCAACTTTTACTTCCTTTATGGATCCAGGGTGAGTTTTGGAAGCAGGAACCTTGGAGAACC---AGTGAAAGGAGAGCCGCCTGCCTCAGAAGTGGG i otoGar3.GL873611 C 0 I 64591 e gorGor5.CYUI01015914v1 1256 20920 - 432965 I a score=2956.000000 s hg38.chr3_KI270784v1_alt 87793 3 + 184404 AGC s nomLeu3.chr20 60403 2 + 85365473 AG- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33898079 3 + 185818997 AGC i rheMac8.chr3 C 0 I 28446 s macFas5.chr3 33514043 2 + 192294377 AG- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4275819 3 - 9440265 AGC i macNem1.NW_012019910v1 C 0 I 27953 s cerAty1.NW_012002954v1 16864764 3 - 21915920 AGC i cerAty1.NW_012002954v1 C 0 I 28692 s chlSab2.chr28 5088 3 - 21531802 AGC i chlSab2.chr28 C 0 I 28213 s manLeu1.NW_012101810v1 21532 3 - 2515279 AGC i manLeu1.NW_012101810v1 C 0 I 33570 s cebCap1.NW_016107703v1 386391 3 - 2125214 AGC i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2095322 64591 - 8137123 I e gorGor5.CYUI01015914v1 1256 20920 - 432965 I a score=-1063.000000 s hg38.chr3_KI270784v1_alt 87796 8 + 184404 ATCCACCT s nomLeu3.chr20 60405 2 + 85365473 ------CC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33514045 2 + 192294377 ------CC i macFas5.chr3 C 0 C 0 s cebCap1.NW_016107703v1 386394 1 - 2125214 -------T i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2095322 64591 - 8137123 I e cerAty1.NW_012002954v1 16864767 28692 - 21915920 I e rheMac8.chr3 33898082 28446 + 185818997 I e manLeu1.NW_012101810v1 21535 33570 - 2515279 I e chlSab2.chr28 5091 28213 - 21531802 I e macNem1.NW_012019910v1 4275822 27953 - 9440265 I e gorGor5.CYUI01015914v1 1256 20920 - 432965 I a score=13733.000000 s hg38.chr3_KI270784v1_alt 87804 45 + 184404 CAGAGGA-TG-GCAGGTG---GGGAGATCCTGGACTGTGCC---------ACCCCCAGG s nomLeu3.chr20 60407 44 + 85365473 CCGAGGA-TG-CCAGGTG---GGGAGATCCT-GCCTGTGCC---------ACCCCCAGG i nomLeu3.chr20 C 0 I 25433 s macFas5.chr3 33514047 46 + 192294377 CCGAGGAGGG-CCAGGTG---GGGAGATCTCAGCCTGGGCC---------ACCCCCAGG i macFas5.chr3 C 0 I 28370 s cebCap1.NW_016107703v1 386395 46 - 2125214 CCAGGGA-TGCCCAGGTG---GGGAAAGCCTGGACTGTGCC---------ACCCCCAGG i cebCap1.NW_016107703v1 C 0 I 30243 s otoGar3.GL873611 2159913 57 - 8137123 CAGTGGG-CA-GCAGGAGGCTGGGATGCTCTGCATTGGGTCTAGAGGCTGACCTGCCGT i otoGar3.GL873611 I 64591 C 0 e cerAty1.NW_012002954v1 16864767 28692 - 21915920 I e rheMac8.chr3 33898082 28446 + 185818997 I e manLeu1.NW_012101810v1 21535 33570 - 2515279 I e chlSab2.chr28 5091 28213 - 21531802 I e macNem1.NW_012019910v1 4275822 27953 - 9440265 I e gorGor5.CYUI01015914v1 1256 20920 - 432965 I a score=280432.000000 s hg38.chr3_KI270784v1_alt 87849 39 + 184404 GGCTCTGCAGCCCTCCCGGTGCTCAGTTATCAGGCTCAC s gorGor5.CYUI01015914v1 22176 39 - 432965 GGCTCTGCAGCCCTCCCGGTGCTCAGTTATCAGGCTCAC i gorGor5.CYUI01015914v1 I 20920 C 0 s nomLeu3.chr20 85884 39 + 85365473 GGCTCTGCAGCCCTCCTGGTGCTCAGTTATCAGGCTCAC i nomLeu3.chr20 I 25433 C 0 s rheMac8.chr3 33926528 39 + 185818997 GGCTCTGCAGCCCTCCCAGTGCTCAGTTATCAGGCTCAC i rheMac8.chr3 I 28446 C 0 s macFas5.chr3 33542463 39 + 192294377 GGCTCTGCAGCCCTCCCGGTGCTCAGTTATCAGGCTCAC i macFas5.chr3 I 28370 C 0 s macNem1.NW_012019910v1 4303775 39 - 9440265 GGCTCTGCAGCCCTCCCGGTGCTCAGTTATCAGGCTCAC i macNem1.NW_012019910v1 I 27953 C 0 s cerAty1.NW_012002954v1 16893459 39 - 21915920 GGCTCTGCAGCCCTCCCAGTGCTCAGTTATCAGGCTCAC i cerAty1.NW_012002954v1 I 28692 C 0 s chlSab2.chr28 33304 39 - 21531802 GGCTCTGCAACCCTCCCGGTGCTCAGTTATCAGGCTCAC i chlSab2.chr28 I 28213 C 0 s manLeu1.NW_012101810v1 55105 39 - 2515279 GGCTCTGCAGCCCTCCCAGTGCTCAGTTATCAGGCTCAC i manLeu1.NW_012101810v1 I 33570 C 0 s colAng1.NW_012117710v1 213610 39 + 6586416 GGCTCTGCAGCCCTCCTGGTGCTCAGTTATCAGGCTCAC i colAng1.NW_012117710v1 N 0 C 0 s calJac3.chr2 146579584 39 - 204313951 GACTTTGCAACCCTCCTGGTGCTCAGCTATCAGGCTCAC i calJac3.chr2 N 0 C 0 s cebCap1.NW_016107703v1 416684 39 - 2125214 GGCTTTGCAGCCCTCCTGGTGCTCAGCTATCAGGCTCAC i cebCap1.NW_016107703v1 I 30243 C 0 s aotNan1.NW_018514293v1 39739 39 + 376347 GGCTTTGCAGCCCTCCTGGTGCTCAGCTCTCAGGCTCAC i aotNan1.NW_018514293v1 N 0 I 22 s otoGar3.GL873611 2159970 31 - 8137123 GG----GCAGGCTCTTTGGTGCTCAA----CAGTCTCAC i otoGar3.GL873611 C 0 C 0 a score=202345.000000 s hg38.chr3_KI270784v1_alt 87888 38 + 184404 -TACCTCTCAAAGGCGTCTCTTCTCTCTGTGGACATTTG s gorGor5.CYUI01015914v1 22215 37 - 432965 --ACCTCTCAAAGGCGTCTCTTCTCTCTGTGGACATTTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 85923 38 + 85365473 -TACCTCTCAAAGGCATCTCTTCTCTATGTGGACATTTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33926567 38 + 185818997 -TACCTCTCAAAGGCCTCTCTTCTCTACGTGGACGTTTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33542502 38 + 192294377 -TACCTCTCAAAGGCCTCTCTTCTCTACGTGGACGTTTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4303814 38 - 9440265 -TACCTCTCAAAGGCCTTTCTTCTCTACATGGACGTTTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16893498 38 - 21915920 -TACCTCTCAAAGGCCTCTCTTCTCTACGTGGACGTTTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 33343 38 - 21531802 -TACCTCTCAAAGGCCTCTCTTCTCTACGTGGACGTTTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 55144 38 - 2515279 -TACCTCTCAAAGGCCTCTCTTCTCTACGTGGACGTTTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 213649 38 + 6586416 -TACCTCTcaaaggcctgtcttctctacgtggacattTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146579623 36 - 204313951 -TAACTTTCAAAGGCCTCTCCTCTCTATGTGGACATT-- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 416723 36 - 2125214 -TACCTCTCAAAGGCCTCTCCTCTCTATGTGGACATT-- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2160001 37 - 8137123 TTCCCTCTCAAGGAC--CTCGTCTTGACATTGACATTTC i otoGar3.GL873611 C 0 C 0 e aotNan1.NW_018514293v1 39778 22 + 376347 I a score=7037763.000000 s hg38.chr3_KI270784v1_alt 87926 1069 + 184404 TCTGTCACAGCTGCAAGATT-------------------CTCACAATAAACTTGCTCTCCAGATTCCTAAAAGAATTGCTTGCTCCAGTTTAGCCAGCTAAGACTTTCTTGGATAATGGCATAATCTGGAAGGATATTTAACAA------TTTTAAACTGGAAATTATTGACTCTATGG-TGAGTCAGGAAAAAC-----------CACATTCACAATATTCAA-------------------------------CAGCAGCGCTGGGCCTTGA-TGCTCCAGGGCAGT------GCAGGGATTAGAGATCTGAGA-GGTTTCATGACGCTTCTCAGGGGAATACACGGGTTCTGGGTTCTTCTAAGGAAGCTCCCTCCATGCCAGCCACCACCTTGTCTCTGCTGGGGAAACAGT-GGTCCA-GGGGCCCTC---AACTGCAGGGAAATTATT--GAACCTCCCAATGTCACTGCATCTCCTCTGGGTCTTCTTTT---ATTCCTTCTTT-CCCCTAGAAAACACCTTCTGACACACGCCCGCTCTGCCTGTCTGTCCCCTGCTGCGGCCAGACAGCGAGCAGGGAAGAAATCCAGTGTCTGGACTGTTTGCTGGTCTGCAGAACCTGTTCTCTCGCAGTATCTGTTTTCCAATGCAGATTTTCACAGTTCCCTAAAGAAACTTCAATTTCCATTCCCAGAATGACTTCATTTCCTGATACCCAGCCCAAATTCACGTGTGTTTGCAGCCGATGTGGCAACATAGCCACTTGGGTGGGGGTGAACATCACAGCCCACAGTTCTGCAGTTCAGATTTGGGTTTATCTTAGCA---CTTAGTGCAACTTTGCATTTGGCAGAGGTCTTTCTCTTTTGTAGTCCTTGCCACCAACCTC--------ATTACTTGTGAGAGTCTGCCTCATGCCTGTCTGCTCAGCAGATGAGAGACCTTGAGGCCTGGGAAGATCCCGCCCTCCTTGGCTCTGTATTCCTAGG---TAGTGCATTGCCTAGT-GGTtggttaattttaggtgtcaacttgactaggctgagggaaacccagatagctgataaaacatgctttctaagtgcgcctgagagggcgtttccagaagagatcagcatttgaatcaggggagtgagt-gggaaaatccacgctccccaa s gorGor5.CYUI01015914v1 22252 1069 - 432965 TCTGTCACAGCTGCAAGATT-------------------CTGACAATAAACTTGCTCTCCAAATTCCTAAAAGAATTGCTTGCTCCAGTTTAGCCAGCTAAGACTTTCTTGGATAATGGCATAATCTGGAAGGATATTTAACAAA-TC--GTTTAAACTGGAAATTATTGACTCTACGG-TGAGTCAGGAAAAAC-----------CACATTCACAATATTCAA-------------------------------CAGCAGCGCTGGGCCTTGA-TGCTCCAGGGCAGT------GCAGGGATTAGAGATCTGAGA-GGTTTCATGACACTTCTCAGGGGAATACACGGGTTCTGGGTTCTTGTAAGGAAGCTCCCTCCATGCCAGCCACCACCTTGTCTCTGCTGGGGAAACAGT-GGTCCA-GGGGCCCTC---AACTGCAGGGAAATTATT--GAACCTCCCAA-GCCACTGCATCTCCTCTGGGTCTTCTTTT---ATTCCTTCTTT-CCCCTAGAAAACACCTTCTGACACACTCCTGCTCTGCCTGTCTGTCCCCTGCTGCGGCCAGACAGCGAGCAGGGAAGAAATCCAGTGTCTGGACTGTTTGCTGGTCTGCAGAACCTGTTCTTTTGCAGTATCTGTTTTCCGATGCAGATTTTCACAGTTCCCTAAAGAAACTTAAATTTCCATTCCCAGAATGACTTCATTTCCTGATACCCAGCCCAAATGCACGTGTGTTTGCAGCCGATGTGGCAACATAGCCACTTGGGTGGGGGCGAACATCACAGCC-ACAATTCTGCAGTTCAGATTTGGGTTTATCTTAGCA---CTTAGTGCAACTTTGCATTTGGCAGAGGTCTTTCTCTTttgtagcccttgccaccaacctc--------attacttgtgagagtctgcctcatgcctgtctgctcagcagatgagagaccttgaggcctgggaagatcccgccctccttggctctgtattcctagG---TAGTGCATTGCCTAGT-GGTtggttaattttaggtgtcaacttgactaggctgaggaaaacccagatagctgataaaacatgctttctaagtgc-cctgagagggcgtttccagaagagatcagcatttgaatcaggggagtgagt-gggaaaatccacgctccccaa i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 85961 1093 + 85365473 TCTCTCACAGCTGCAAGATT-------------------CTGACAATAAACTTGCTCTCCAAATTCCTAAAAGAATTGGTTGCTCCAGTTTAGCCAGCTAAGACTTTCTTGGATAATGGCATAATCTAGAAGGATATTTAACAAACTC--GTTTAAACTGGAAATTATTGACTCTATGG-TGAGTCAGGAAAAACCACGTTCAATGCACATTCACAATATCCAA-------------------------------CAGCAGCGCTGGGCCTTGA-TGCTGCAGGGCAGT------GCAGGGATTGGAGATCTGAGA-GGTTTCATGACGCTTCTCAGGGGAATACACAGGTTCTGGCTTCTTCCAAGGAACCTCCCTCCATGCCAGCCACCACCTTGTCTCTGCTGGGGAAACAGTGGGTCCAGGGGGCCCTC---AACTGCAGGGAAATTATT--GAACCTCCCAGTGTCACTGCATCTCCTCTGGGTCTTCTTTT---ATTCCTTCTTT-CCCCTAGAAAACACCTTCTGACACACTCCTGCTGTGCCTCTCTGTCCCCTGCTGCGGCCAGACAGCGAGCAGGAAAGAAATCCAGCATCTGGACTGTTTGCTGGTCTGCAGAACCTGTTCTCTCGCAGTGTCTG-TTTCCAATGCAGATTTTCACAGTCCCCTAAAGAAACTTAAAATTCCATCCCCAGAATGACTTCATTTCCTGATACCCAGCCCAAATTCACGTGTGTTTGGAGCCAACGTGGCAACACAGCCAGTTGGGTGGGGGTGAACATCGCAGCCCACAGTTCTGCAGTTCAGATTTGGGTTTATCTCAGGA---CTTAGTGCAACTGTGCATTTGGC-GAGATCTTTCTCTTTTGTAGCCATTGCCACCAACCTCATGATGTAATTCCttgtgagggtctgcctcatgcctgtctgctcagcagatgagaggccttggggcctgggaagatcccgtcctccttggctctgtattcctagg---tagtgcattgcctagt-ggatggttaattttaggtgtcaacttgactaggctgagggaaacccagatagctgataaaacacgctttctaagcgcgtctgagagggcgtttccagaatagatcagcctttgaatcaggggactgagtagggaaaatccatgctccccaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33926605 1125 + 185818997 TCTGTCACAGCCGCAAGATT-------------------CTGAC---AAACTTGCTCTCCAAATTCCTAAAATAATTGGTTGCTCCAGTTTAGCCAGCTAAGACTTCCTTGGATAATGACATAACCTAGAAAGATATTTAACAAATTC--GTTTAAACTGGAAATTATTGACTCTACAGTTGAGTCAGAAAAACC--CATTCAATACACATTCGCAATATTCAGCAGCAGCTCAATACACATTGGCAATATTCAACAGCAGCGCTGGGTCCTGA-GGCTCCAGGGCAGTGCAGGAGCAGGGATTAGAGGTCTGAGC-GGTTTCATGGCACTTCTCAGGGGAATACACGGGTTCTGGGTTCTTTCAAGGAACCTCCCTCCGTGCCAGCCACCACCTGGTCCCTGCTGGGGAAATAGT-TGTCCAGGGAGCCCTC---AACTGTAGGGAAATTACT--GACCCTCCCGATGTCACCGCATCTCCACTGGGTCTTCTTTT---ATTCCTTCTTT-CCCCTAGAAAACACCTTCTGACACACTCCTGCTCTGCCTGTCTGTCCCCTGCTGCAGCCAGACAGTGAGCACGAAAGAAGTCCAGTGTCTGGACTGTTTGCTGATTTGCAGAACCTGTTCTCTCGCAGTATCTGTTTTCCAATGCAGATTTTCATGGTCCCCTAAAGAAACTTAAAATTCCATTCCCAGAATGACTTCATTTCCTGATACCCAGCCCAAATTCACTTGTGTTTGGAGCCAATGTGGCAACACAGCCACTTGGGT-GGGGTGAACATCACAGCCCACAATTCTGCACTTCAGATTTGGGTTTATCTTAAGA---CTTAGTGCAACTTTGCATTTGGTAGAGGCCTTTCTCTTTTGTAGCCCTTGCCACCAACCTCATCGTGTAATTAC-TGTGAAAGTCTGCTTCATGCCTGTCTGCTCAGCAGATGAGAGACCTTGAGGCCTGGGAAGATCCCGCCCTCCCTGGCTCTGTATTCTGAGG---CAGTGCATTGCCTAGT-Ggatggttaattttaggtgtcaacttgactaagctgagggaaacccagagagctgatacaacatgctttgtaagtatgtctgagagggaggatccagaagagatcagtacttgaatcaagggactgagcagggaaaatccacgctccccaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33542540 1129 + 192294377 TCTGTCACAGCCGCAAGATT-------------------CTGACAATAAACTTGCTCTCCAAATTCCTAAAATAATTGGTTGCTCCAGTTTAGCCAGCTAAGACTTCCTTGGATAATGACATAACCTAGAAAGATATTTAACAAATTC--GTTTAAACTGGAAATTATTGACTCTACAGTTGAGTCAGAAAAACC--CATTCAATACACATTCGCAATATTCAGCAGCAGCTCAATACACATTGGCAATATTCAACAGCAGCGCTGGGTCCTGA-GGCTCCAGGGCAGTGCAGGAGCAGGGATTAGAGGTCTGAGC-GGTTTCATGGCACTTCTCAGGGGAATACACGGGTTCTGGGTTCTTCCAAGGAACCTCCCTCCGTGCCAGCCACCACCTGGTCCCTGCTGGGGAAATAGT-TGTCCAGGGAGCCCTC---AACTGTAGGGAAATTACT--GACCCTCCCGATGTCACCGCATCTCCACTGGGTCTTCTTTT---ATTCCTTCTTT-CCCCTAGAAAACACCTTCTGACACACTCCTGCTCTGCCTGTCTGTCCCCTGCTGCAGCCAGACAGTGAGCACGAAAGAAGTCCAGTGTCTGGACTGTTTGCTGATTTGCAGAACCTGTTCTCTCGCAGTATCTGTTTTCCAATGCAGATTTTCACGGTCCCCTAAAGAAACTTAAAATTCCATTCCCAGAATGACTTCATTTCCTGATACCCAGCCCAAATTCACTTGTGTTTGGAGCCAATGTGGCAACACAGCCACTTGGGT-GGGGTGAACATCACAGCCCACAATTCTGCACTTCAGATTTGGGTTTATCTTAAGA---CTTAGTGCAACTTTGCATTTGGCAGAGGCCTTTCTCTTTTGTAGCCCTTGCCACCAACCTCATCGTGTAATTACTTGTGAAAGTCTGCTTCATGCCTGTCTGCTCAGCAGATGAGAGACCTTGAGGCCTGGGAAGATCCCGCCCTCCCTGGCTCTGTATTCTGAGG---TAGTGCATTGCCTAGT-Ggatggttaattttaggtgtcaacttgactaagctgagggaaacccagagagctgatacaacatgctttgtaagtatgtctgagagggaggatccagaagagatcagtacttgaatcaagggactgagcagggaaaatccacgctccccaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4303852 1124 - 9440265 TCTGTCACAGCCGCAAGATT-------------------CTGACAATAAACTTGCTCTCCAAATTCCTAAAATAATTGGTTGCTCCAGTTTAGCCAGCTAAGACTTCCTTGGATAATGACATAACCTAGAAAGATATTTAACAAATTC--GTTTAAACTGGAAATTATTGACTCTACAGTTGAGTCAGAAAAACC--CATTCAATACACACTCGCAATATTCAGCAGCAGCTCAATACACATTGGCAATATTCAACAGCAGCGCTGGGTCCTGA-GGCTCCAGGGCAGTGCAGGAGCAGGGATTAGAGGTCTGAGC-GGTTTCATGGCACTTCTCAGGGGAATACACGGGTTCTGGGTTCTTCCAAGGAACCTCCCTCCGTGCCAGCCACCACCTGGTCCCTGCTGGGGAAATAGT-TGTCCAGGGAGCCCTC---AACTGTAGGGAAATTACT--GACCCTCCCGATGTCACCGCATCTCCACTGGGTCTTCTTTT---ATTCCTTCTTT-CCCCCAGAAAACACCTTCTGACACACTCCTGCTCTGCCTGTCTGTCCCCTGCTGCAGCCAGACAGTGAGCACGAAAGAAGTCCAGTGTCTGGACTGTTTGCTGATTTGCAGAACCTGTTCTCTCGCAGTATCTGTTTTCCAATGCAGATTTTCACGGTCCCCTAAAGAAACTTAAAATTCCATTCTCAGAATGACTTCATTTCCTGATACCCAGCCCAAATTCACTTGTGTTTGGAGCCAATGTGGCAACACAGCCACTTGGGT-GGGGTGAACATCACAGCCCACAATTCTGCACTTCAGATTTGGGT-----TTAAGA---CTTAGTGCAACTTTGCATTTGGCAGAGGCCTTTCTCTTttgtagcccttgccaccaacctcatcgtgtaattacttgtgaaagtctgcttcatgcctgtctgctcagcagatgagagaccttgaggcctgggaAGATCCCGCCCTCCCTGGCTCTGTATTCTGAGG---TAGTGCATTGCCTAGT-Ggatggttaattttaggtgtcaacttgactaagctgagggaaacccagagagctgatacaacatgctttgtaagtatgtctgagagggaggatccagaagagatcagtacttgaatcaagggactgagcagggaaaatccacgctccccaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16893536 1126 - 21915920 TCTGTCACAGCCGCAAGATT-------------------CTGACAATAAACTTGCTCTCCAAATTCCTAAAATAATTGGTTGCTCCAGTTTAGCCAGCTAAGACTTCCTTGGATAATGACATAATCTAGAAAGATATTTAACAAATTC--GTTTAAACTGGAAATTATTGACTCTACAGTTGAGTCAGAAAAACC-ACATTCAATACACATTCGCAATATTCAGCAGCAGCTCAATACACATTGGCAATATTCAACAGCAGCGCTGGGTCCTGA-GGCTCCAGGGCAGTGCAGGAGCAGGGATTAGAGGTCTGAGA-GGTTTCATGGCACTTCTCAGGGGAATACACGGGTTCTGGGTTCTTCCAAGGAACCTCCCTCCGTGCCAGCCACCACCTGGTCCCTGCTGGGGAAATAGT-GGTCCAGGGAGCCCTC---AACTGTAGGGAAATTACT--GACCCTCCCGATGTCACCGCATCTCCACTGGGTCTTCTTTT---ATTCATTCTTT-CCCCTAGAAAACACCTTCTGACACACTCCTGCTCTGCCTGTCTGTCCCCTGCTGCAGCCAGAC----AGCACGAAAGAAGTCCAGTGTCTGGACTGTTTGCTGATTTGCAGAACCTGTTCTCTCGCAGTATCTGTTTTCCAATGCAGATTTTCACGGTCCCCTAAAGAAACTTAAAATTCCATTCCCAGAACGACTTCATTTCCTGATACCCAGCCCAAATTCACTTGTGTTTGGAGCCAATGTGGCAACACAGCCACTTGGGT-GGGGTGAACATCACAGCCCACAATTCTGCACTTCAGATTTGGGTTTATCTTAGGA---CTTAGTGCAACTTTGCATTTGGCAGAGGCCTTTCTCTTTTGTAGCCCTTGCCACCAACCTCATCGTGTAATTACTTGTGAAAGTCTGCTTCATGCCTGTGTGCTCAGCAGATGAGAGACCTTGAGGCCTGGGAAGATCCCGCCCTCCCTGGCTCTGTATTCCGAGG---TAGTGCATTGCCTAGT-Ggatggttaattttaggtgtcaacttgactaagctgagggaaacccagagagctgatacaacatgctttgtaagtatgtctgagagggaggatccagaagagatcagtacttgaatcaagggactgagcagggaaaatccacgctccccaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 33381 1127 - 21531802 TCTGTCACAGCGGCAAGATT-------------------CTGACAATAAACTTGCTCTCCAAATCCCTAAAATAATTGGTTGCTCCAGTTTAGCCAGCTAAGACTTCCTTGGATAATGACATAATCTAGAAAGATATTTAACAAATTC--GTTTAAACTGGAAATTATTGACTCTACAATTGACTCAGAAAAACC-ACATTCAATACACATTCGCAATATTCAGCAGCAGCTCAATACACATTGGCAATATTCAGCAGCAGTGCTGGGTCCTGA-GGCTCCAGGGCAGTGCAAGAGCAGGGATTAGATGTCTGAGA-GGTTTCATGGCGCTTCTCAGGGGAATACATGGGTTCTGGGTTCTTCCAAGGAACCTCCCTCCGTGCCAGCCACCACCTGGTCCCTGCTGGGGAAATAGT-GGTCCAGGGAGCCCGC---AACTGTAGGGAAATTACT--GACCCTCCCGATGTCACCGCATCTCCACTGGGTCTTCTTTT---ATTTCTTCTTT-CCCCTAGAAAACAC---CTGACACACTCCTGCTCTGCCTGTCTGTCCCCTGCTGCAGCCAGACAGTGAGCATGAAAGAAGTCCAGTGTCTGGACTGTTTGCTGATTTGCAGAACCTGTTCTCTCGCAGTATCTGTTTTCCAATGCAGATTTTCACGGTCCCCTAAAGAAACTTAAAATTTCATTCCCAGAATGACTTCATTTCCTGATACCCAGCCCAAATTCACTTGTGTTTGGAGCCAATGTGGCAACATAGCCACTTGGGT-GGGGTGAACATCACAGCCCACAATTCTGCACTTCAGATTTGGGTTTATCTTAGGA---CTTAGTGCAACTTTGCATTTGGCAGAGGCCTTTCTCTTTTGTAGCCCTTGCCACCAACATCATCGTGTAATTACTTGTGAGAGCCTGCTTCATGCCTGTCTGCTCAGCAGATGAGAGACCTTGAGGCCTGGGAAGATCCCGCCTTCCCTGGCTCTGTATTCCGAGG---TAGTGCATTGCCTAGT-Agatggttaattttaggtgtcaacttgactaagctgagggaaacccggagagctgatacaacatgctttctaagtgtgtctgagagggagggtccagaagagatcagtacttgaatcaagggactgagcagggaaaatccacgctccccaa i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 55182 1125 - 2515279 TCTGTCACAGCCGCAAGATT-------------------CTGACAATAAACTTGCTCTCCAAATTCCTAAAATAATTGGTTGCTCCAGTTTAGCCAGCTAAGACTTCCTTGGATAATGACATAATCTAGAAAGATATTTAACAAATTC--GTTTAAACTGGAAATTATTGACTCTACAGTTGAGTCAGAAAAACC-ACATTCAATACACATTCGCAATATTCAGCAGCAGCTCAATACACATTGGCAATATTCAACAGCAGCGCTGGGTCCTGA-GGCTCCAGGGCAGTGCAGGAGCAGGGATTAGAGGTCTGAGA-GGTTTCATGACACTTCTCAGGGGAATACACGGGTTCTGGGTTCTTCCAAGGAACCTCCCTCCGTGCCAGCCACCACCTGGTCCCTGCTGGGGAAATAGT-GGTCCAGGGAGCCCTC---AACTGTAGGGAAATTACT--GACCCTCCCGATGTCACCGTATCTCCACTGGGTCTTCTTTT---ATTCCTTCTTT-CCCCTAGAAAACACCTTCTGACACACTCCTGCTCTGCCTGTCTGTCCCCTGCTGCAGCCAGAC----AGCACGAAAGAAGTCCAGTGTCTGGACTGTTTGCTGATTTGCAGAACCTGTTCTCTCGCAGTATCTGTTTTCCAATGCAGATTTTCACGGTCCCCTAAAGAAACTTAAAATTCCATTCCCAGAACGACTTCATTTCCTGATACCTAGCCCAAATTCACTTGTGTTTGGAGCCAATGTGGCAACACAGCCACTTGGGT-GGGGTGAACATCACAGCCCACAATTCTGCACTTCAGATTTGGGTTTATCTTAGGA---CTTAGTGCAACTTTGCATTTGGCAGAGGCCTTTCTCTTTTGCAGCCCTTGCCACCAACCTCATCGTGT-ATTACTTGTGAAAGTCTGCTTCATGCCTGTCTGCTCAGCAGATGAGAGACCTTGAGGCCTGGGAAGATCCCGCCCTCCCTGGCTCTGTATTCTGAGG---TAGTGCGTTGCCTAGT-Ggatggttaattttaggtgtcaacttgactaagctgagggaaacccagagagctgatacaacatgctttgtaagtatgtctgagagggaggatccagaagagatcagtacttgaatcaagggactgagcagggaaaatccacgctccccaa i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 213687 1104 + 6586416 TCTGTCACAGCTGCAAGATTGTCTGTCACAGCTGCAAGACTGACAATAAACTTGTTCTCCAAATTCCTAAAATAATTGGTTGCTCCAGTTTAGCCAGCTAAGACTTCCTTAGATAATGACATAATCTAGAAAGATATTTAACAAATTC--ATTTAAACTGGAAATTATTGACTGTACAG-TGAGTCAGAAAAACC-ACATTCAATACACATTCGCAGTATTCAG-------------------------------CAGCAGCGCTGGGTCTTGA-GGCTCCAGGGCAGTGCAGGAGCAGGGATTAGAGGTCTGAGA-GGTTTCAGGACGCTTCTCAGGGGAATACACGGGTTCTGGGTTCTTCCAAGGAACCTCCCTGCATGCCAGCCACCACCTGGTCCCTGCTGGGGAAATAGT-GGTCCAGGCAGCCCTC---GACTGTAAGGAAATTACT--GAACCTTCCGATGTCACCGCGTCTCCACTGGGTCTTCTTTC---ATTCCTTCTTT-CCCCTAGAAAACACCTTCTGACACACTCCTGCTCTGCCTGTCTGTCCCCTGCTGCAGCCAGACAGTGAGCACGAAAGAAGTCCAGTGTCTGGACTGTTCGCTGATTTGCAGAACCTGTTCTCTTGCAGCGTCTGTTTTCCAGTGCAGATTTTCACGGTCCCCTAAAGAAACTTAAAATTCCATTCCCAGAATGACTTCATTTCCTGATACCCAGCCCAAATTCACTTGTGTTTGGAGCCAATGTGGCAACATAACCACTTGGGTGGGGGTGAGCATCACAGCCCACAGTTCTGCACTTCAGATTTGGGTTGATCTTAGGA---CTTAGTGCAACTTCGCCTTTGGCAGAGGCCTTTCTCTTTTGTCGCCCTTGCCACCAACCTCGTCGTGTAATTGCTTGTGAGAGTCTGCTTCACGCCTGTCTGCTCAGCAGATGAGAGACCTTGAGGCCTGGGAAGATCCCGCCCTCGCTGGCTCTGTATTCCGAGG---CAGTGCATGGCCTGGT-Ggatggttaattttaggtgtccacttgactaagctgagggaaacccggaga-------------gctttctcagtgtgtctggga-ggagggtccagaagagatcagtgttggaatcaagggactgagcagggaaaatccacgctccccaa i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146579659 1074 - 204313951 TCTGTCATAGCTGCAAGGTT-------------------CTGACAATAAGCTTGCTC-CCAAATTCCTAAAAGAATTCGTTGCTCCCATTTAGCCAGCTAAGACTTTCTTGGATAATGACATAATCTAGAAGGATATTTAACGAATTC--ATTTAAACTGGAAATTATTGACTCTGTGG-TGAGTCAGGGAAAACCGCATTCAATACACATTCACAATATTCAG-------------------------------CAGCAGCGCAGGGTGTTGA-TACTCCAGGGCAGT------GCAGGGATTAAGGATCAGAGA-GGTTCCATGGTGCTTCTGAGGGAGATACACAGGTTCTGGGTTCTTCTAAGGAATTTCCCTTCATGCCAGCCACCACCTTGCCCCTGCTAGGGAAGTAGT-GATCCAGGGAGCCCCC---ACCTATAGGGAAATTATT--CAACCTCCTGATGTCACTGCACCTCTTCTGGGTCTTCTTTT---ATCCCTTCTTC-CACCTAGAAAACACCTTCTAATGCACTCCTGCTCTGCCTGCCTGTCCCCTGCTCTGGCTGGACAGAGATCAGGAAAGATGTCCAGCATCCAGACTGTTTGCTGGTTTGAAGAATCTGTTCTCTCACAGTATCTGTTTTCCAGTGCAGATTTTCATAGTCCCCTAAAGAAGCTTAAAATTACATTCCCAGAATGACTTCATTTCCTGATACCCAATCAAATTTCACTTGTGTTTGGAGCTGATGTGGCAATATAACCACTTGGGTGGGGGTAAACATCACAGCCCACAGTTCTGCAGTTCAGATTTGGGTTTATCTTAGGA---CTTAGTGCAACTTTGCA----------------------TGCAGCCCTTGCCACCAACCTCAGGATATAATTACttgtgagaggctgcttcatgcctgtctgctcagtggataagagaccttgaggcctggaaaagtcctgccctccttggctcagtattcctaggtcctagtgtattgcctggtgggatggttaattttaggtgtcaactttactaggctaagggaaa-ctggatagctgataaaacacgctttcccagtgtgtctgagtgggtatttccagaagagatcagcattggaatcagggcactgacttgggaaaaccaatgctccccaa i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 416759 1073 - 2125214 TCTGTCATAGCTGCAAGGTT-------------------CTGACAATAAGCTTGCTCTCCAAATTCCTAAAAGAATTGGTTGCTCCAGTAGAGCCAGCTAAAACTTTCTTGGATAATGACATAATCTAGAAGGATATTTAACAAATTC--ATTTAAACTGGAAATTATTGACTCTATGG-TGAGTCAGGAAAAATCACATTCAATACACATTCACAATATTTGG-------------------------------CAGCAGCACAGGGTGTTGA-TACTCCAGGGCAGT------GCAGGTATTAGGGATCTGAGA-GGTTTCATGGTGCTTCTCAGGGAGATACACAGGTTCTGGGTTCTTCCAAGGAATTTCCCTTCATGCCAGCCACCACCTTGTCTCTGCTAGGGAAGTAGT-GATCCAGGGAG-CCCC---AACTGTAGGGAAATTATT--TAACCTCCCGATATCACTGCACCTCCTCTGGGTCTTCTTTT---ATCCCTTCTTT-CTCCTAGAAAACACCTTCTGATGCACTCTTGCTCTGCCTGCCTGTCCCCTGCTGTGTCTGGACAGAGATCAGGAAAGAGGTCCAGCATCTGGACTGTTTGCTGGTTTGCAGAATCTGTTCTCTCATAGTATCTGTTTTCCAATGCAGATTTTCACAGTCCCCTAAAGAAGCTTAAAATTACATTCCCAGAATGACTTCATTTCCTGATACCCAGCCAAATTTCACTTGTGTTTGGAGCCGATGTGGTAATAT-ACCACTTGGGTGATGGTGAACATCACAGCCCACAGTTCTGCAGTTCAGATTTGGGTTTATCTTAGGA---CTTAGTGCAACTTTGCA----------------------TGTAGTCCTTGCCACCAACCTCAGGATGTAATTACTTGTGAGAGGCTGCTTCATGCCTGTCTGCTCAATGGATGAGAGACCTTGAGGCCTAGGAAAGTCCTGCTCTCCTTGGCTCGGTATTCCTAGGTCCTAGTGTGTTGCCTGGCGGgatggttaattttaggtgtcaacctgactaggctaagggaaa-tcggatagctgataaaacatgctttctatgtgtgtctgagagggtatttccagaagagatcagcattggaatcagggcactgagttgggaaaacccatgatccccga i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 39800 1063 + 376347 TCTGTCATAGCTGCAAGGTT-------------------CTGACAATAAGCTTGGTCTCCAAATTCCTAAAAGAATTGGTTGCTCCAGT---------------TTTGATGGACAACGACATAATCTAGAAGGATATTCAACAAATTC--ATTTAAACTGGAAATTATTGACTCTATGG-TGAGTCAGGAAAACCCGCATTCAATACACATTCACAGTATTCAG-------------------------------CAGCAGCGCAGGGGGTTGG-TACTCCAGGGCAGT------GCAGGCATTAGGGATCTGAGA-GGTTTCGCGGCACTTCTCAGGGAGACACACAGGTTCTGGGTTCTTCCAAGGAATTTCCCTTCATGCCAGCCACCACCTTGTCTCTGCTAGGGAAGTAGT-GATCCAGGGAGCCCCC---AACTGGAGGAAAATTAGT--CAACCTCCCGACGTCACTGCACCTCCTCTGGGTCTTCTTTT---ATCCCTTCTTT-CCCCTAGAAAACGCCTTCTGATGCACCCCTGCTCTGCCTGCCTGTCCCCTGCTGTGGCTGGACAGAGATCAGGAAAGAGGTCCAGCGTCTAGACTGTTTGCTGGTTTGCAGAATCTGTTCTCTCGCATTATCCGTTTTCCAATGCAAATTTTCATGGTCCCCTAAAGAAGCTTAAAATTACATCCCCAGAATGACTTCATTTCCTGATACCCAGCCCAGTTTCACTTGTGTTTGGAGCCGATGTGGCAATATAACCACTTGGGTGGGGGTGAACATCACAGCCCACAGTTCTGCAGTTCAGATTTGGGTTTATCTTAGGACCCCTTAGTGCAACTTTGCA----------------------TGTAGCCCTTGCCACCAACCTCAGGATGTAATTACTCGTGAGAGGCTGCTTCATGCCTGTCTGCTCAGCGGATGAGAGGCCTTGCGGCCTGGGAAAGTCCTGCCCTCCTTGGCTCGGTATTCCTAGGTCCTAGTGTATTGCCTGGCGGgatggttaattttatgtgtcaacctgactaggctaagggaaa-ccagatagctgataaaacatgctttctaagtgtgtctgagagggtatttccagaagagaccaacattggaatcagggcactgagttgggaaaacccatgctccccaa i aotNan1.NW_018514293v1 I 22 C 0 s otoGar3.GL873611 2160038 1038 - 8137123 TCCATCACAGCTGCAGGATT-------------------CTGAC-ATAAACCTGTTGTCC----------AAGAATTGTTTGCTCCAGCTTAACCAGCTGAGACTTCGCTCAGTAATGACATCAGCTGGAAGAAAGTTTAACAAGCTCCAGTTTAAACTGGAAATTATTGACTCTACAG-TGAGTCAGGAAACGCCACGTTTAGGACGTATTCACAATATTTAA-------------------------------AAGCATTGTTGGGCCTTCACTGCTCCA--------CAAGAGCAGGGATTAGAGA---GAGAGGGTTTAACGATTCTTCTTAGGGG-ATATAGGGGGTCTGAGGTCTCTGAAGG-ATGTCCCTTTGCCCCAACCATCACCTG----TAAGTGAGAGAATAGC-AACCTAGGAAGGCTTCCCAAACAGAAGGAGAAATACTCAAAACCACCCTATGTTGCCATGTC-CCTTTGGATCTGTTTTTGTGATTGCTTCTTTCCCCCTAGAAAACATCCTCAAACACACTCCT-------TTGTCTGTCGCTCA---TGACTGGATAGCTAGCAGGAAAAAAAACAAGTGCCTGGGATATGCCCTGGCTTGTAATATCCAGGCT---------TAGAGTTTTCAATCCAGATTTTCATGGTTTCCTAAAGAAACTCAAAATTACATTCCTGGAATGACCTCATCTACTAATACTCAGCC-AGATTCTTTCCCTTTTGGAGCTGATGTGGCAACACAGCCACTTGGGGAGGGGTGAAAATCATAGCCCATAATCCTGCAGGTCATGTTGGGGTTTATCTTAGTA---CCTAGCGCAACTTT-----TAGCAGAGACATTTTTCTTTTGTTGCACTTGCTACTGACTCCATTATGTAATTATCTGTGTGAGTTTGTTTCTTGTCTG---------------------CTAGCAGGATGGCAAATTGTTGCCCTCCTTAGCTATGCCTTTCCAAGTCCTAGCTCATTGCCTGGtgtgatggttaattttatgtgtcaactgaactgggctatgggatacccagatagctgacaaaatg---tttctaagtatgtctgtgagggtgtttccagaagagattagcatttgaatca-gtgactgagttaagaagacccaccctccccag i otoGar3.GL873611 C 0 I 102 a score=5314828.000000 s hg38.chr3_KI270784v1_alt 88995 832 + 184404 ------ag-gctgagggcccagatagaacaaaaaggcagaggaagggtgaattctttccttattctggatctgagacatccatcttctcctgcccccaaacatcagaactcggggttctcaggcctttggactccgggacgtacaccagcaacttc-----cctggttctccagcttg---tagatggca------gcaggacttctcatcctccataatcacatgagccaagtcacatgaaaaattcctgctcatccctctctctgtgtacatcctattggttctgtttctatggagaact----ctaatacaACTGGCACAGACTAGCTGCTCAACAAG--TGTTTTATTTCTGAATGACT--------CAGATGTTTGAGCAGCTTCCAAGC--TTACATA-CCTG----TGTTTCCATTAAAGCCATTGTTTAGGAGGCCGATGGCAACAAAAGGTTGAAACATGGCAAAATCAGGGGCAGTTGATTTGAGTTATACCGTGATGTGTTTACATTTG-------------------TACTATGATAGGGATTTATTGCAAGGAGTTAGGAATGCTGGCCTCTAAAAGCTGGAAAAGTGTATT-TTGTTGGGGAGGCCTGGGAGCCCCCATCTCACACACAGGAGGGAAGACACAAGGGGAAGCACTCGTGACGATGAACGAGATGTTGTT-CCtgccagacgcaggtccttgccgtgtgtgtgcataa------cctcatttcattcgatagcaactcaggaggaggaaatcattattaactgtattcttttatgtacagaagctgaggctt-gaaagtgaaaatgacacagctg-ttcatggtcttgctggcattggagcc-aggaGAGAAAAATCCCTTGGTAAAAT-CTCCCAGCTGAA s gorGor5.CYUI01015914v1 23321 828 - 432965 ------ag-gctgagggccca-atagaacaaaaaggcagaggaagggtga-ttctttccttattctggatctgagacatccatcttctcctgcccccaaacatcagaactcggg-ttctcaggcctttggactccgggacgtacaccagcaacttc-----cctggttctccagcttg---tagatggca------gcaggacttctcatcctccataatcacatgagccaagtcacatgaaaaatccctgctcatccctctctctgtgtacatcctattggttctgtttctatggagaact----ctaatacaActggcacagactagctgctcaacaag--tgttttatttctgaatgact--------gaGATGTTTGAGTAGCTTCCAAGC--TTACATA-CCTG----TGTTTCCATTAAAGCCATTGTTTAGGAGGCCGATAGCAACAAAAGGTTGAAACATGGCAAAATCAGGGGCAGTTGATTTGAGTAATACCATGATGTGTTTACATTTG-------------------TACTGTGATAGGGATTTATTGCAAGGAGTTAGGAATGCTGGCCTCTAAAAGCTGGAAAAGTGTATT-TTGTTGGGGAGGCCTGGGAGCCCC-ATCTCACACACAGGAGGGAAGACACAAGGGGAAGCACTCGTGACGATGAACGAGATGTTGTT-CCtgccagacgcaggtccttgccgtgtgtgtgcataa------cctcatttcattcgatagcaactcaggaggaggaaatcattattaactgtattcttttatgtacagaagctgaggctt-gaaagtgaaaatgacacagctg-ttcatggtcTTGCTGGCATTGGAGCC-AGGAGAGAAAAATCCCTTGGTAAAAT-CTCCCAGCTGAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 87054 834 + 85365473 ------agtgctgagggcccagatagaacaaaaaggcagaggaagggtgaattctttccttattctggatctgagacatccatcttctcctgcccccaaacatcagaactcggggttctcaggccttcagactcccggacgtacaccagcaacttc-----cctggttctccagcttg---t-gatggca------gcaggacttctcatcctctgtaatcacgtgagccaagtcacatgaaaaacccccgctcatgcctctctctgtgtacatcctattggttctgtttctatggagaact----ctaatacaactggcacagactagctgctcaacgag--tgttttatttctgaatgact--------gaGATGTTTGAGTAGCTTCCAGGC--TTACACA-CCTG----TGTTTCCATTGAAGCCATTGTTTAGGAGGCCGATGGCAACAAAAGGTTGAAACGTGGCTTAATCAGGGGTTGTTGATTTGAGTTATACCACGATGTGTTTAAATTTG-------------------TACTATGATAGGGATTTATTGCAAGAAGTTAGGAATGCCGGCCTCTAAAAGCTGGAAAAGTGTATT-TTGTTGGGGAGGCCTGGCAGCCCCCGTCTCACACACAGGAGGGACGACAC-AGGGGAGGCGTTCGTGACGATGAACGAGA---TGTT-CCtgccagacgcaggtccccgccttgtgtgtgcataacctcatcctcatttcagtcgacagcaactcaggaggaggacatcgttattaactgtattctttcatgtacagaagctgaggctt-gaacgtgaaaatgacacagctg-ttaatggtcttgctggcattggagcc-AGGAGAGAAAACTCCCTTGGTAAAGT-CTCCCAGCTGAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33927730 829 + 185818997 ------agtgctgagggcccagatagaa-aaaaaggcagaggaagggtcaattctttccttattctggatctgagacgtccatcttctcctgcccccaaacctcagaactccaggttctcaggccttcggactctgggacgtacaccaggaacttc-----cccggttctccagcttg---tagatggca------gcaggacttctcatcctctgtaaccacagaagccaagtcacatgaaa--ccccccctcacccctctctctgtgtacatcctatgggttctgtttctatggagaact----ctaatacaACTGGCAAAGACTAGC-GTTCAGCAAG--CGTTTTATTTCTGAATGACT--------GAGATGTTTGAGTGGCTTCCAAGC--TGACATA-CCTG----TGTTTCCATTAAAGCCATTGTTTCGAAGGTCGATGGCAACAAAAGGTTGAAACATGGCATAATCCGGGGTTGTTGATTTGAATTGTACCATGATGTGTTTAAATTTG-------------------TACTATGATAGGGATTTGTTGCAAGAAGTTAGGAATGCCGGCATCTAAAAGCTGGAAAAGCGTATT-TTGTTGGGGAGGTCTGG-AGCTCCCATCTCACACGCAGGAGGGAAGACACAACTGGAAGCAATCAAGCTGACGAACGAGATGTTGTT-CCTGCCAGACGCAGGTCCTTGCCTTGTGTGTGCCTAA------CCTCACTTCGTTCGACAGCAACACAGGAGGAGGAAATCACCATTAACCGTGCTCTTTTATGTGCAGAAGCTGAGGCTTGGAAACTGAAAATGACACAGCTG-TGAACGGTCTTGCTGGCATTGGAGCC-AGGAGAGAAAATGCCCTTGGTAAAAT-CTCCCAGCTGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33543669 829 + 192294377 ------agtgctgagggcccagatagaa-aaaaaggcagaggaagggtcaattctttccttattctggatctgagacgtccatcttctcctgcccccaaacctcagaactccaggttctcaggccttcggactctgggacgtacaccaggaacttc-----cccggttctccagcttg---tagacggca------gcaggacttctcatcctctgtaaccacagaagccaagtcacatgaaa--ccccccctcacccctctctctgtgtacatcctatgggttctgtttctatggagaact----ctaatacaACTGGCAAAGACTAGC-GTTCAGCAAG--CGTTTTATTTCTGAATGACT--------GAGATGTTTGAGTGGCTTCCAAGC--TGACATA-CCTG----TGTTTCCATTAAAGCCATTGTTTCGAAGGTCGATGGCAACAAAAGGTTGAAACATGGCATAATCCGGGGTTGTTGATTTGAATTGTACCATGATGTGTTTAAATTTG-------------------TACTATGATAGGGATTTGTTGCAAGAAGTTAGGAATGCCGGCATCTAAAAGCTGGAAAAGCGTATT-TTGTTGGGGAGGTCTGG-AGCTCCCATCTCACACGCAGGAGGGAAGACACAACTGGAAGCAATCAAGCCGACGAACGAGATGTTGTT-CCTGCCAGACGCAGGTCCTTGCCTTGTGTGTGCCTAA------CCTCACTTCGTTCGACAGCAACACAGGAGGAGGAAATCACCATTAACCGTGCTCTTTTATGTGCAGAAGCTGAGGCTTGGAAACTGAAAATGACACAGCTG-TGAACGGTGTTGCTGGCATTGGAGCC-AGGAGAGAAAATGCCCTTGGTAAAAT-CTCCCAGCTGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4304976 829 - 9440265 ------agtgctgagggcccagatagaa-aaaaaggcagaggaagggtcaattctttccttattctggatctgagacgtccatcttctcctgcccccaaacctcagaactccaggttctcaggccttcggactctgggacgtacaccaggaacttc-----cccggttctccagcttg---tagacggca------gcaggacttctcatcctctgtaaccacagaagccaagtcacatgaaa--ccccccctcacccctctctctgtgtacatcctatgggttctgtttctatggagaact----ctaatacaACTGGCAAAGACTAGT-GTTCAGCAAG--CGTTTTATTTCTGAATGACT--------GAGATGTTTGAGTGGCTTCCAAGC--TGACATA-CCTG----TGTTTCCATTAAAGCCATTGTTTCGAAGGTCGATGGCAACAAAAGGTTGAAACATGGCATAATCCGGGGTTGTTGATTTGAATTGTACCATGATGTGTTTAAATTTG-------------------TACTATGATAGGGATTTGTTGCAAGAAGTTAGGAATGCCGGCATCTAAAAGCTGGAAAAGCGTATT-TTGTTGGGGAGGTCTGG-AGCTCCCATCTCACACGCAGGAGGGAAGACACAACTGGAAGCAATCAAGCCGACGAACGAGATGTTGTT-CCtgccagacgcaggtccttgccttgtgtgtgcctaa------cctcacttcgttcgacagcaacacaggaggaggaaatcaccattaaccgtgctcttttatgtgcagaagctgaggcttggaaactgaaaatgacacagctg-tgaacggtcttgctggcattggagcc-AGGAGAGAAAATGCCCTTGGTAAAAT-CTCCCAGCTGAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16894662 829 - 21915920 ------agtgctgagggcccagatagaacaaaaaggcagaggaagggtcaattctttccttattctggatctgagacatccatcttctcctgcccccaaacctcagaactccaggttctcaggcctttggactctgggacgtacaccaggaacttc-----cctggttctccagcttg---tagacggca------gcaggacttctcatcctctgcaaccacagaagccaagtcacatgaaaccccccccctcacccctctctctgtgtacatcctatgggttctgtttctatggagaact----ctaatacaACTGGCAAAGACTAGC-ATTCAGCAAG--CGTTTTATTTCTGAATGACT--------GAGATGTTTGAGTGGCTTCCAAGC--TGACATA-CCTG----TGTTTCCATTAAAGCCATTGTTTCGAAGGTCGATGGCAACAAAACGTTGAAACATGGCATAATCCGGGGTTGTTGATTTGAATTGTACCATGATGTGTTTAAATTTG-------------------TACTATGATAGGGATTTGTTGCAAGAAGTTAGGAATGCTGGCATCTAAAAGCTGGAAAAGCGTATT-TTGTTGGGGAGGCCTGG-AGCTCCCATCTCACACACAGGAGGGAAGACACAACTGGAAGCAATCAAGCCGACGAACGAGATGTTGTT-CCtgccagacgcaggtccttgccttgtgtgtgcctaa------cctcacttcgttcgacagcaacgc---aggaggaaatcaccattaacagtgctcttctatgtgcagaagctgaggcttggaaactgaaaatgacacagctg-tgaacggtcttgctgacattggagcc-AGGAGAGAAAATGCCCTTGGTAAAAT-CTCCCAACTGAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 34508 829 - 21531802 ------agtgctgaaggcccagatagaacaaaaaggcagagcaagggtcaattctttccttattctggatctgagacatccatcttctcctgccccc-aacctcagaactccaggttctcaggccttcggactctgggacgtacaccaggaacttc-----cctggttctccagcttg---tagacggca------gcaggacttctcatcctctgtaaccacagaagccaagtcacatgaaa--ccccctctcacccctctctctgtgtacatcctatgggttctgtttctatggagaact----ctaatacaACTGGCAAAGACTAGC-CTTCAGCAAG--TGTTTTATTTCTGAATGACT--------GAGATGTTTGAGTGGCTTCCAAGC--TGACATA-CCTG----TGTTTCCATTAAAGCCATTGTTTCGAAGGTTGATGACAACAAAAGGTTGAAACATGGCATAATCCGGGGTTGTTGATTTGAATTGTACCATGATGTGTTTAAATTTG-------------------TACTATGATAGAGATTTGTTGCAAGAAGTTAGGAATGCCGGCATCTAAAAGCTGGAAAAGCGTATT-TTGTTGGGGAGGCCTGG-AGCTCCCATCTCACACACAGGAGGGAAGACACAACTGGAAGCAATCAAGCCGACGAACGAGATGTTGTT-CCTGCCAGACGCAGATCCTTGCCTTGTGTGTGCCTAA------CCTCACTTCATTCGACAGCAACGCAGGAGGAGGAAATCACCATTAACCGTGCTCTTTTATGTGCAGAAGCTGAGGCTTGGAAACTGAAAATGACACAGCTG-TGAACGGTCTTGCTGGCATTGGAGCC-AGGAGAGAAAATGCCCTTGGTAAAAT-CTCCCAACTGAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 56307 830 - 2515279 ------agtgctgagggcccagatagaacaaaaaggcagaggaagggtcaattctttccttattctggatctgagacatccatcttctcctgcccccaaacctcagaactccaggttctcaggccttcggactctgggacgtacaccaggaacttc-----cctggttctccagcttg---tagacggca------gcaggacttctcatcctctgtaaccacagaagccaagtcacatgaaa--ccccccctcacccctctctctgtgtacatcctatgggttctgtttctatggagaact----ctaatacaACTGGCAAAGACTAGC-GTTCAGCAAG--CGTTTTATTTCTGAATGACT--------GAGATGTTTGAGTGGCTTCCAAGC--TGACATA-CCTG----TGTTTCCATTAAAGCCATTGTTTCGAAGGTTGATGGCAACAAAACGTTGAAACATGGCATAATCCGGGGTTGTTGATTTGAATTGTACCATGATGTGTTTAAATTTG-------------------TACTATGATAGGGATTTGTTGCAAGAAGTTAGGAATGCTGGCATCTAAAAGCTGGAAAAGCGTATT-TTGTTGGGGAGGCCTGG-AGCTCCCATCTCACACACAGGAGGGAAGACACAACTGGAAGCAATCAAGCCGACGAACGAGATGTTGTT-CCTGCCAGACGCAGGTCCTTGCCTTGTGTGTGCCTAA------CCTCACTTCGTTCGATAGCAACGCAGGAGGAGGAAATCACCATTAACCGTGCTCTTTTATGTGCAGAAGCTGAGGCTTGGAAACTGAAAATGACACAGCTG-TGAACGGTCTTGCTGGCATTGGAGCC-AGGAGAGAAAATGCCCTTGGTAAAAT-CTCCCAACTGAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 214791 850 + 6586416 ------agtgctgagggcccagagaggacaaaaaggcagaggaagggtcaattctttccttattctggatccgagacatccatcttctcctgcccccaaacctcggaactccaggttctcaggccttcggactctgggacgtacaccaggaacgtc-----cctggctctccagcttg---tagacggca------gcaggacttctcgtcctctgtaaccacagaagccaagtcacatgaaa--cccccgctcctccctctctctgtgtacgtccgatgggttctgtttctatggagaact----ctaatacaACTGGCAAAGACTAGC-GTTCAGCAAG--CGTCTTACTTCTGAGTGACT--------GAGATGTTTGAGTGGCTTCCAAGC--TGACACA-CCTG----TGTTTCCATTAGAGCCATTGTTTCGAGGGTCGATAGCAACAACAGGTTGAAACACGGCATAATCTGGGGTTGTTGATTTGAATTGTGCCATGACGTGTTTAAATGTGTACTACGATTAAACTACGATACTACGATAGGGATTTATTGCAAGAAGTGAGGAATGCTGGCATCTAGAAGCTGGAAAAGCATATT-TTGTTGGGGGGGCCTGG-AGCTCCCATCTCACACACAGGAGGGAAGACACAACTGGAAACAATCAAGCCGACGAACGGGATGTTGTTCCCtgccagaggcaggtccttgccttgtgtgtgcctaa------cctcacttcgttcaacagcaacacaggaggaggaaatcaccgttaaccgcgctcttttacgtgcagaagctgaggctcagaaactgagaatgacacagctg-tgaacggtctcgctggcattggagcc-AGGAGACAAAATGCCCTTGGTAAAAT-CTCTCAACGGAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146580733 825 - 204313951 ------agggctgagggcccagatgagacaaaaagtcagaggaaaggtggattctttccttcttcttgatctgagacatccatcatctcctgcccccaaacatcagaactccaagttttcaggcctttggactgtgggacgtacaccagctacttc-----cctggttctctggccta---tagatggca------ccaggacttctcatcctctgtaatcacatgagccaactcacatgaaaaatccccactcattcctccatttccatatatccaat-ggttctatttctatggagaact----ttaatacaattggtgcagactagctgttcaacaag--tgttttatttctgaatgactgaGATGTGGAGATGTGTAAGTAGCTTCCAAGC--TTACAAA-CCTG----TGTGTCTGTTAAAGCCAATGTTCAGGAAGCTGATGACAATAAAATGCTGAAACGTGGCATAAGGAGGGGCTGTGGATTTGAGTTATACCATGATGTGTTTAAATTTG-------------------TACTGTGTTAGGGATTTATGGCAAGAAGTTAGGAATGCTGGCCTCTGAAAGCTGGAGAAGTGTATT-TTGTTGGGGAGGCCTGGGAGCCCCCATCTCACATA----------------ATCAGAAGGAATTATGACAATGGATGAGATATTCCT-CCTGCCAGATGCAGGTCCTTTCCTTGTGTGtgcataa------cctcatttcatccgatagcaactcaggaggaggaaatcatgattaaccttatccttttatgcacagaagctgaggcttggaaagtgaaaatgacacagcta-ttaactgtcttgctggcattggagcc-AGGAGAGAAAACTCTCTTGGCAAAAT-CTCCCAATTAAA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 417832 819 - 2125214 ------agtactgagggcccagataggacaaaaagtcagaggaaagatgaattctttccttcttcatgatctgagacatccatcttctcctgcccccaaacatcagaactccaagttctcaggccttcgaactctgggacatacaccagctacttc-----cctggttctccagcctg---tagatggca------ccaggagttctcatcctctgtaatcatatgagccaactcacatgaaaaagccccactcattcctccctttctatatatccaat-ggttctatttctatggagaact----ttaatacaATTGGTGCAGGCTAGCTGTTCAACAAGTTTTTTTTATTTCTGAATGACT--------GAGATGTGTGAGTAGCTTCCAAGC--TTACAAA-CCTG----TGTGTCTGTTAAAGCCACTGTTCAGGAAGCCGATGACAATAAAAGGTTGAAACGTGGCATAAGCAGGGGCTGTGGATTTGAGTTATACCATGATGTGTTTAAATTTG-------------------TACTGTGATAGGGATTTATGGCAAGAAGTTAGGAATGCCAGCCTCTGAAAGCTGGAGAAGTGTATT-TTGTTGGGGAGGCCTGGGAGCCCCCATCTCACATA----------------ATCGGAAGTGAGCATGACAATGAATGAGATATTCCT-CCTGCCAGATGCAGGTCCTTGCCTTGTGTGTGCATAA------CCTCATTTCATCCAATAACGACTCAGGAGGAGGAAATAATGATTAACTTTATTCTTTTATGCACAGAAGCTGAGGCTTGGGAAGTGAAAATGACACAGCTA-TTAATGGTCTTGCTGGCAATGGAGCA-AGGAGAGAAAACTCTCTTGGCAAAAT-CTCCCAATTAAA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 40863 812 + 376347 ------agtgctgagggcccagataggacaaaaagtcagaggaaaggtgaattctttccttcttcttgatctgagacatccgtcttctcctgcccccaaacatcagaactccaagttctcaggccttcggactctgga----acaccagctacttc-----cctggttctgcagcctg---tagatggca------ccaggacttctcatcctctgtaatcatatgagccaactcacatgaaaaatccccactcactcctccctttctatatatccgat-ggttctatttccatggagaact----ttaatacaATTGGCGCAGACTAGCTGTTCAACAAG--TGTTTTATTTCTGAATGACT--------GAGATGTGTGAGTAGCTTCCAAGC--TTACAAA-CCTG----TATGCCTGTTAAAGCCACTGTTCAGGAAGCCGATGACAATAAAATGTTGAAACGTGGCATAAGCAGGGTCTGTGGATTTGAGTTATACCATGATGTGTTTACATTTG-------------------TACCATGATAGGGATTTATGGCAAGAAGTTAGGAATGCTGGCCTCTGAAATCTGGAGAAGTGTGTT-TTGTTGGGGAGGCCTGGGAGCCCACATCTCACATA----------------ATTGGAAGGAATCATGACAACGAATGAGATATTCCT-CCtgccagatgcaggtccttgccttgtgtgtgcataa------cctcatttcatccgacagtgactcaggacgaggaaatcatgattaaccttattc-tttatgcacagaagctcaggctcggaaagtgaaaatgacacagcta-ttaacggtcccgctggcattggagcc-aagagagAAAACTCGCTTGGCAAGAT-CTCCCGATTAAA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2161178 859 - 8137123 aggttgagaactgctggtctagagagaacaaaagggtaaaggaaga--tgattgtttc--tcttctagatctaggacatccagcttctcctatcctcaaacataagaaccccaggatcttgggtattcaggctctgggccttacaccagtgcttccaggttcttggtttttggccttggactgaaagccacatcatccagggcttcttaccctccctgctcacaggtg---attctcacaataaatcccttctcaactctctctctctgtgtatcctataggttctgtttcactagagaactctgactaatacaACTGGCACAGAGTAGAATCTCATCTAC--TATTTGATTTCTGAATGACT--------GAGAAGTTTGAGTATCATCCCAGCATTTACACAGCCTGGGGCTGGGTCCACTGCAGCTGCTGTTTGGGAGATGGATGGCATTAAAAGCTTGCAGCATGGC--GATCAAGGGTTATTGATTTCAGTTATGCCATGATGTATTTGAATTTA-------------------TACTATGATAGAGGTTCATTGCAAGTAGTTAGGAATTTCATCCTCTAAGAGCTGAGAAAATGTATTGTTGGTGAGGGGATATGG-GGGCCCTACCTCACACACAGGAGGGAAGACACAAGTGGAAACCATTGTGATGATGGAAGAAGTGTGTTT-CCAGGCAGACAAAGGCCCagagcttgtgtgtgcatga------tctcatcttatctaatggcagcccaggaggtagggatcattattaacttcattcttttacacaaagaagctgaggtttggaaagttaaaatgaTGTAGCTATTTAAGGACCTTGCTGGCTTTGGGACCTAGGTGAGAAAACTCTTTAGATGATATCCCCCCAGTTAAA i otoGar3.GL873611 I 102 C 0 a score=5089950.000000 s hg38.chr3_KI270784v1_alt 89827 781 + 184404 TGGGGAAATGG-GAATATATCCCGCATGGCCCAAAGAGACA------------ATGGCTGGAAGTGGTCACAGTCCT-CGAGGGGGAGCTG-TGTGGTGGCC-AGGCTGTGGTCATGAAGACACAGCGGCGTGGGAGGCTGAGGGTCGCTG-GGGATGCTGGCTGGAATGTTTCTG-TTAATAGCTGGAGCTCCAGAGCCTGTCCTGGAAGAGGGATGGGGGCCTGGTCCTGGGAGAGTTTGTAAACCGGCAT--GAGCACATGTCAGGGTGGAGCTCTGACGTCAGGACC-CTGGCATGACTGCAATAGACATCACACAAATGGGGCAAGAGGACCAAG------CCTCCC--CACG--GTACAGCTGCTCAA----CTGTGTGGGGGGAGCTGTG-GTGAAAC-ACAGGACTCA----CTTAGAAAGATCCAGAGAG-AGAATCCacccacagaaaacctggagagcattttgaaatttcctacaggaaatcc-----aggagaaaAGGAGTCCTATTCAG-TGATG-GGAGGGGGTGC----------------------------------------AGGTCAGGGGCCGCATCGG-AAGGCAGTCGTCTGAAGGGAT--GCA-CGGATTCACGATGGAGGTGCTGAGACAGCCACAGG-AGGTGGTGAGTGGGGGCCATGGGGATTGGGTGGGGAATCTAGAGCTggg-a-cactctggttttgatggaaggagcatcgccc-taggaag-c-aaagacacagattcgagtccaggcctggagcaacc----ttcaatcacccttaagccctctgagtttctgcgtctgtgaaa-taagcataatgattcccacctca------cagggGCAGG--GGCAGGGGCAGG s panTro5.chr10 2201 787 + 135926727 tGGGGAAATGGCGAATATATCCCGCCGTGCCCAAAGAGACA-------------TGGCTGAAGTTGGTCACAGTCCTACGAGGGGGAGCTG-TGTGGTGGCCCAGGCTGTGGTCATGAAGACACA-TGGCGTGG-AGGCTAAGGGTCACTGCGGGATGCTGGCTG-AATGTTTCTGCTTAATAGCTGGAGCTC-AGAGCC-GTCCTGGAAGAGG-ATGGGG-CCTGGTCCTGG-AGGGTTTGTAAACCGGCATATGAGCACATGTCAGG-TGGAGCT-TGACGTCAGGACCACTGG-ATGACTACAATAGACATCACACAAATGGGG-AAGAGCGACAAG------CCTCCC--CACGCGGTACAGCT-CTCAAACTTTTGTGTGGGCGGAGCTGTGCGTGAAACCACAGGGATCA----CTTAGAAAGATCCAGAGAGCAGAATCCACCCACAGAAAACCTGGAGAGCATTTTTGAAATTCCTACAGGAAAACCCAGACGGGATAAAAGGAGTCC-ATTCAG-TGATG-G-AGGGCGTGC----------------------------------------AGGTCAGGGCCGCCATCGA-AGGCCAGTCGTCTGAAGGGATTTGCAACGGATTCACGACGACGGTGCTGAGGCAGCCACAGGCAGGTGGTGAGTGGGCGGCATGGG-ATTGGGTGGGGAATCTAGA-CTGGGTA-CACTCTGGTTTTGATGGAAGGAG-ATCGCCCCTAGGAGCTC-AAAGACACAGATTCGAGTCCAGGCCTGGAGCAACC----TTCAATCACCCTTTA-CCGTCTGAGTTTC-GCGTCGCTGAAAATAAGCATAATGATTCC-ACCTCA------CAGGGCCAGG-TGGCAG---CAGA i panTro5.chr10 N 0 C 0 s gorGor5.CYUI01015914v1 24149 774 - 432965 TAGGGAAATGG-GAATATATCCCGCATGGCCCAAAGAGACA------------ATGGCTGGAAGTGGTCACAGTCCT--GAGGGGGAGCTG-TGTGGTGGCC-AGGCTGTGGTCATGAAGACACAGCGGCGTGGGAGGCTGAGGGTCGCTG-GGGATGCTGGCTGGAATGTTTCTG-TTAATAGCTGGAGCTCCAGAGCCTGTCCTGGAAGAGGGATGGGGGCCTGGTCCTGGGAGGGTTTGTAAACCGGCAT--GAGCACATGTCAGGGTGGAGCTCTGATGTCAGGACC-CTGGCATGACTACAATAGACATCACACAAATGGGGCAAGAGGACCAAG------CCTCCC--CACG--GTACAGCTGCTCAA------CTGTGGGGGGAGCTGTG-GTGAAAC-ACAGGACTCA----CTTagaaagatccagagag-agaatccacccacagaaaacctggagagcattttgaaacttcctacaggaaatcc-----aggagaaaAGGAGTCCTATTCAG-TGATG-G-GAGGGGTGC----------------------------------------AGGTCAGGGGCCGCATCGG-AAGGCAGTCGTCTGAAGGGAT--GCA-CGGATTCACGACAGAGGTGCTGAGGCAGCCACAGG-AGGTGGTGAGTGGGGGCCACGGGGATTGGGTGAGG-ATCTAGAGCTggg-a-cactctggttttgatggaaggagcatcgcct-taggagg-c-aaag--acagattcaagtccaggcctggagcaacc----ttcaatcacccttaagccctctgagtttctgtgtctgtgaaa-taagcataatgattcccacctca------cagggGCAGG--GGCAGGGGCAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 87888 779 + 85365473 TGGGGAAATGG-GAATACATCCCGCATGGCCCAAAGAGACA------------ATGGCTGGACGTGGTCACAGTCCT-CGAGGGGGAGCTG-TGTGGTGGCT-CAGCTGTGGCCATGAAGACACAGCGGCCTGG-AGGCTGGGGGTCGCTG-GGGATGCTGGCTGGAATGTTTCTG-CTAATAGCTGGAGCTCCAGAGCCTGTCCTGGAAGAGGGACGGGGGCCTGGTCCTGGGAGGGTTCGTAAACCGGCAT--CGGCACATGTCAGG-TGGAGCTCTGACGTGGGGACC-CTGGCGTGACTCCAACAGACATCACACGAATGGGGCAAGGGGACCAAG------CCTCCC--CGCG--GTACAGCTGCTCAA----CCATGTGGGGGGAGCTGTG-GTGAAAC-ACAGGACTCG----CTTAGAAAGATCCCGAGGG-AGAATCCacccacggaaaacctggagagtgttttgaaacttcctacaggaaacct-----aggagaaaAGGGGTCCTACCGAG-TCATG-GGAGGGGGTGC----------------------------------------AGGTCAGGGGCCGCATCGG-AAGGCAGTCGTCTGAAGGGAT--GCA-CGGATTCACGATGGAGGTGCTGAGGCAGCCACAGG-AGGTGGTGGGTGGGGGCCGTGGGGATCGGGTCAGGAATCTAGAGCTGGG-A-CACTCCGGTTTTGAtggaaggagcatcgcct-taggagg-c-aaagacacagattcgagtccaggcctggagcaccc----ttcaatcacccttaagccctgtgagtttctgcgtctgtgaaa-tgagcataatgattcccacctca------cagggGCAGG--GGCAGGGGCAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33928559 777 + 185818997 TGGGGAAATGG-GAATACACCCTGCAGGGCCCACAGAGACA------------ATGGCTGGAAAC-GTCACAGTCCT-CGAGGGGGAGCTG-TGCGGTGGCC-GGGCTGTGGCCGTGAAGACACAGTGGTGTGGGAGGCTGGGGGCCGCTG-GGGAT-CTGGCTGGAAGGTTTCCG-TTAATAGCTGGAGCTCCAGAGCCTGTCCTGGAAGAGGGAAGCGGACCTGGTCCTGGGAGGGTTTGTAAACCGGCAA--GAGCAC--GTCAGTGTAGAGCTCTGACGTCAGGACC-CTGG-ATGCCTACAACAGAGATCACACGAATGGGGCAAGAAGACCAAG------CCCCCCACCATG--GTGCAGCTGCTCCA----CTGTGTCAGGGGAGCTGTG-GTGAAAC-ACAGGACTCG----CTTAGAAAGATCCCGAGAG-AGAATCCacccgcagaaaacctggagagtattctgaaacttcctacaggaaatcc-----aggagaaa--GAGTCCTATTCTG-TGATG-GGAGGGGGTAC----------------------------------------TGGTCAGGGGCTGCGTCGGAAAGGCAGTCGTTGGAAAGGAT--GTA-CGGATTCTCGCTGGAGGTGCTGAGGCAGCCACAGG-AGGTGGTGGGTGGGGGCCTTGGGGATTGGGTGGGGAATCTAGAGCTGGG-A-C-CCCTGGATTTGAtggaaggagcattgcct-tgggagg-taaaagatacagatttgagtccaggcctgtagcatcc----ttcagtcacccttaagtcctctgagtttctgtgtctgtgaaa-tgagcataacggttcccaccaca------cagagGCAGG--GGCAGGGGCAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33544498 775 + 192294377 TGGGGAAATGG-GAATACACCCTGCAGGGCCCACAGAGACA------------ATGGCTGGAAAC-GTCACAGTCCT-CGAGGGGGAGCTG-TGCGGTGGCC-GGGCTGTGGCCGTGAAGACACAGTGGTGTGGGAGGCTGGGGGCCGCTG-GGGAT-CTGGCTGGAAGGTTTCCG-TTAATAGCTGGAGCTCCAGAGCCTGTCCTGGAAGAGGGAAGCGGGCCTGGTCCTGGGAGGGTTTGTAAACCGGCAA--GAGCAC--GTCAGTGTGGAGCTCTGACGTCAGGACC-CTGG-ATGCCTACAACAGAGATCACACGAATGGGGCAAGAAGACCAAG------CCCCCCG-CATG--GTGCAGCTGCTCCA----CTGTGTCGGGGGAGCTGTG-GTGAAAC-ACAGGACTCG----CTTAGAAAGATCCCGAGAG-AGAATCCacctgcagaaaacctggagagtattctgaaacttcctacaggaaatcc-----aggagaaa--GAGTCCTATTCTG-TGATG-GGAGGGGGTAC----------------------------------------TGGTCAGGGGCTGCGTCGGAAAGGCAGTCGTTGGAAAGGAT--GTA-CGGATTCTCGCTGGAGGTGCTGAGGCAGCCACAGG-AGGTGGTGGGTGGGGGCCTTGGGGATTGGGTGGGGAATCTAGAGCTGGG-A-C-CCCTGGATTTGAtggaaggagcgttgcct-tgggagg-taaaagatacagattcgggtccaggcctgtagcatcc----ttcagtcacccttaagtcctctgagtttctgtgtctgtgaaa--gagcataacggttcccaccaca------cagggGCAGG--GGCAGGGGCAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4305805 781 - 9440265 TGGGGAAATGG-GAATACACCCTGCAGGGCCCACAGAGACA------------ATGGCTGGAAAC-GTCACAGTCCT-CGAGGGGGAGCTG-TGCGGTGGCC-GGGCTGTGGCCGTGAAGACACAGTGGTGTGGGAGGCTGGGGGCCGCTG-GGGAT-CTGGCTGGAAGGTTTCCA-TTAATAGCTGGAGCTCCAGAGCCTGTCCTGGAAGAGGGAAGCGGGCCTGGTCCTGGGAGGGTTTGTAAACCGGCAA--GAGCAC--GTCAGTGTGGAGCTCTGACGTCAGGACC-CTGG-ATGCCTACAACAGAGATCACACGAATGGGGCAAGAAGACCAAG------CCCCCC--CATG--GTGCAGCTGCTCCA----CTGTGTCGGGGGAGCTGTG-GTGAAAC-ACAGGACTCG----CTTAGAAAGATCCCGAGAG-AGAATCCACCTGCAGAAAACCTGGAGAGTATTCTGAAACTTCCTACAGGAAATCC-----AGGAGAAA--GAGTCCTATTCTG-TGATG-GGAGGGGGTAC----------------------------------------TGGTCAGGGGCTGCGTCGGAAAGGCAGTCGTTGGAAAGGAT--GTA-CGGATTCTCGCTGGAGGTGCTGAGGCAGCCACAGG-AGGTGGTGGGTGGGGGCCTTGGGGATTGGGTGGGGAATCTAGAGCTGGG-A-C-CCCTGGATTTGAtggaaggagcgttgcct-tgggagg-taaaagatacagattcgggtccaggcctgtagcatcc----ttcagtcacccttaagtcctctgagtttctgtgtctgtgaaa-tgagcataacggttcccaccacacaggggcaggggcagg--ggcaggggcagg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16895491 781 - 21915920 TGGGGAAATGG-GAATACACCCTGCAGGGCCCACAGAGACA------------ATGGCTGGAAAC-GTCACAGTCCT-TGAGGGGGAGCTG-TGCGGTGGCC-GGGCTGTGGCCGTGAAGACACAGTGGTGTGGGAGGCTGGGGGCCGCTG-GGGAT-CTGGCTGGAAGGTTTCCG-TTAATAGCTGAAGCTCCAGAGCCTGTCCTGGAAGAGGGAAGCGGGCCTGGTCCTGGGAGGGTTTGTAAACCGGCAA--GAGCAC--GTCAGTGTGGAGCTCTGACGTCAGGACC-CTGG-ATGCCTACAACAGAGATCACACGAATGGGGCAAGAAGACCAAG------CCCCCC--CATG--GTGCAGCTGCTCCA----CTGTGTGGGGGGAGCTGTG-GTGAAAC-ACAGGACTCG----CTTAGAAAGATCCCGAGAG-AGAATCCacccgcagaaaacctggagagtattctgaaacttcctacaggaaatcc-----aggagaaa--GAGTCCTATTCTG-TGATG-GGAGGGGGTAC----------------------------------------TGGTCAGGGGCTGCGTTGGAAAGGCAGTCATTGGAAAGGAT--GTA-CGGATTCTCGCTGGAGGTGCTGAGGCAGCCACAGG-AGGTGGTGGGTGGGGGCCTTGGGGATTGGGTGGGGAATCTAGAGCTGGG-A-C-CCCTGGATTTGAtggaaggagcgttgcct-tgggagg-taaaagatacagattcgagtccaggcctgtagcatcc----ttcagtcacccttaagtcctctgagtttctgtgtctgtgaaa-tgagcataacggttcccaccacacaggggcaggggcagg--ggcaggggcagg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 35337 774 - 21531802 TGGGGAGATGG-GAATACACCCTGCAGGGCCCACAGAGACA------------ATGGCTGGAAAC-GTCACAGTCCT-CGAGGGGGAGCTG-TGTGGTGGCC-AGGCTGTGGCCGTGAAGACATAGTGGTGTGGGAGGCTGGGGGCCGCTG-GGGAT-CTGGCTGGAAGGTTTCCG-TTAATAGCTGGAGCTCCAGAGCCTGTCCTGGAAGAGGGAAGTGGGCCTGGTCCTGGGAGGGTTTGTAAACTGGCAA--GAGTAC--GTCAGTGTGGAGCTCCGACGTCAGGACC-CTGG-ATGCCTACAACAGACATCACACGAATGGGGCAAGAAGACCAAG------CCCCCC--CATG--GTGCAGCTGCTCCA----CTGTGTGGGGGGAGCTGTG-GTGAAAC-ACAGGACTCG----CTTAGAAAGATCCCGAGAG-AGAATCCacccacagaaaacctggagagtattctgaaacttcctacaggaaatcc-----aggagaaa--GAGTCCTATTCTG-TGATG-GGAGGGGGTAC----------------------------------------TGGTCAGGGGCTGCGTCGGAAAAGCAGTTGTTGGAAAGGAT--GCA-CGGATTCTCGCTGGAGGTGCTGAGGCAGCCACAGG-AGGTGGTGGGTGGGGGCACTGGGGATTGGGTGGGGAATCTAGAGCTGGG-A-C-CCCTGGTTTTGACggaaggagtgttgcct-tgggagg-t-aaagacacagattcgagtccaggcctgtagcatcc----ttcagtcgcccttaagccctctgagtctctgcgtctgtgaaa-tgagcataccggttgccaccaca------cagggGCAGG--GGCAGGGGCAGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 57137 775 - 2515279 TGGGGAAATGG-GAATACACCCTGCAGGGCCCACAGAGACA------------ATGGCTGGAAAC-GTCACAGTCCT-CGAGGGGGAGCTG-TGCGGTGGCC-GGGCTGTGGCCGTGAAGACACAGTGGTGTGGGAGGCTGGGGGCCGCTG-GGGAT-CTGGCTGAAAGGTTTCCG-TTAATAGCTGGAGCTCCAGAGCCTGTCCTGGAAGAGGGAAGCGGGCCTGGTCCTGGGAGGGTTTGTAAACCGGCAA--GAGCAC--GTCAGTGTGGAGCTCTGACGTCAGGACC-CTGG-ATGCCTACAACAGAGATCACACGAATGGGGCAAGAAGACCAAG------CCCCCC--CGTG--GTGCAGCTGCTCCA----CTGTGTGGGGGGAGCTGTG-GTGAAAC-ACAGGACTCG----CTTAGAAAGATCCCGAGAG-AGAATCCacccgcagaaaacctggagagtattctgaaacttcctacaggaaatcc-----aggagaaa--GAGTCCTATTCTG-TGATG-GGAGGGGGTAC----------------------------------------TGGTCAGGGGCTGCGTCGGAAAGGCAGTCGTTGGAAACGAT--GTA-CGGATTCTCGCTGGAGGTGCTGAGGCAGCCACAGG-AGGTGGTGGGTGGGGGCCTTGGGGATTGGGTGGGGAATCTAGAGCTGGG-A-C-CCCTGGATTTGAtggaaggagcattgcct-tgggagg-taaaagatacagattcgagtccaggcctgtagcatcc----ttcagtcacccttaagtcctctgagtttctgtgtctgtgaaa-tgagcataacggttcccaccaca------caggggcagg--ggcaggggcagg i manLeu1.NW_012101810v1 C 0 I 2232 s colAng1.NW_012117710v1 215641 777 + 6586416 -GGGGAAATGG-GAATGCACCCTGCAGGGCCCACAGAGACA------------ATGGCTGG-AAC-GTCACGGTCCT-CGA-GGGGAGCGG-TGCGGTGGCC-GGGCTGTGGCCGTGAAGACACAGCAGTGTGGGAGGCTGGGGGCTGCTG-GGGAT-CTGGCTGGAAGGTTTCCG-TTAATAGCTGGAGCTCCAGAGCCGGTCCTGGAAGAGGGAAGTGGGCCCGGTCCTGGGAGGGTTTGTAAACCGGCAA--GAGTGC--GTCAGCGTGGGGCTCCGACGTCAGGACC-CTGGCATGCGTACAACAGACCTCACACGAATGGGGCAAGAGGACCAAG------CCCTGC--CATG--GTGCAGCTGCTCCG----CCGTGTGGGGGGAACTGTG-GTGAAAC-ACAGGACTCG----CTTAGAAAGATCCCAAGAG-AGAATCCGCCCACAGAAAACCTGGGGAGTATTCTGAAACTTTCTGCAGGAAATCC-----AGGAGAAA--GAGTCCTATTCTG-TGATG-GGAGGGGG-GC----------------------------------------TGCTCAGGGGCTGCGTCGGAAAGGCAGTC-TTGGAAAGGAT--GCA-CGGATTCTCGCTGGAGGTGCTGAGGCAGCCACAGG-AGGTGGTGGGTGGGGGCCATGGGGATTGGGTGGAGAATCTAGAGCTGGG-ATC-CCCTGGATTTGAtggaaggagcgtcgcct-tgggagg-c-aaagacacagattcgagtccaggcctgtagcatcc----ttcagtcacccttaagcctcctgagtttctgtgtctgtgaaa-tgagcatcacggttcccacctcacaggggcaggggcagg--ggcaggggcagg i colAng1.NW_012117710v1 C 0 I 12 s calJac3.chr2 146581558 776 - 204313951 TGAGGAGATGG-AGATATATCCTGTATGGCCCAAAGAGACA------------ATGGCTGGAAACAGTCACAGTCCT-CGA-GGGGAGTTA-TGTGGTGGCC-GGGCTGTGGCTGTGAAGACACAGCAGCATGGGAGGCTGGGAGTCGCAG-AGGATTCTTGCCGGAAGGTTTCCA-TTAATAGCTGGAGCTCCTGAGCCTGTCCTGGAAGAGAGAAGTGGGCCTGGTCCTGGGTGGGTTTGTAAATGGGCTT--GAGCACA--TCACTGTGAAGCTCTGAGGTCAGGACC-CCAGCATGCCCACAATAGACATGACACAAATGGGGCAGGAGGACCAAG------TCCCCC--CACC--ATGCAGCTGCTCAG----CTGTGTGGGGGTAGCTGTG-GTGAAAC-ATAGAACTCA----CTTAGAAAGATCCCAagagaataatccacccacagaaaacctggagagtattttgaaacttcctacaggaaatcc-----aggagaaaAGGAGTCCTCTCCAG-TGATG-GGAGGTGGTGC----------------------------------------AGGTTGGGGGCTGCATCAGAAAAGCGGTCAATGGAAGGGAT--GCA-CGGATTCTCGCTGGAGGTGCAGAGGCAGCCACAGA-AGGTGGTGGGTGGAGGCCTTGGGGATTTAGT-GGGAATCTACAGCTGGA-A-TGCTCTGGTTTTGAtggaaggagcatcgcct-taggaag-c-aaagatacagattcaagtccaggcctgtagcatccttcattcaaccacccttaagccctctgagtttctgtgtctgtgaag-tgagcatattgattcccacctca------cagtgtCAGG--G-------CAAG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 418651 774 - 2125214 TGGGGAGATGG-AGATATATCCTGTATGGCCCAAAGAGACA------------ATGGCTGGAAATGGTCACAGTCCT-CGA-GGGGAGCTA-TGTGGTGACC-GGGCTGTGGCTGTGAAGACACGGCAATGTGGGAGGCTGGGAGTTGCAG-AGGCTGCTGGCCAGAATGCTTCCG-TTAATAGCTGGAGATCCTGGGCCTGTCCTGGAAGAGAGAAGTGGGCCTGGTCCTGGGAGGGTTTGTAAACCGGCTT--GAGCACATGTCAGTGTGGAGCTCTGAGATCAGGACC-CCAGCATGCCCACAATAGACATCACACAAATGGGGCAGGAGGACCAAG-------CCCCC--CACC--GTGCAGCTGCTCAG----CTGTGTAGGGGTAGCTGTG-GTGAAAC-ACAGAACTCA----CTTAGAAAGATCCCAAGAGGATAATCCacccacagaaaacctggagagtattttgaaacttcctacaggaaatcc-----aggagaaaAGGAGTCCTCTCCAG-TGATG-GGAGGTGGTGC----------------------------------------AGGTCGGGGGCTGCATCAGAAAGGCGGTTGATGGAAAGGAT--GCA-CGGATTCTCACTGGAGGTGGAGAGGCAGCCACGGA-AGGTGGTGGATGGGGGCCTTGGGGATTGAGTGGGGGATCTACAGCTGGG-A-TGCTCTGGTTTTGAtggaaggagcatcacct-taggaag-c-aaagacacacattcgagtccatgcctgtagcatcc----ttcaatcacccttaagccctctgagtttctgtgtctgtgaaa-tgagcataatgattcccacctca------cagggGCAGG--G-------CAGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 41675 731 + 376347 TGGGGATATGG-AGATGTATCCTGTATGGCCCAAAGAGACA------------ATGG-------------------------------------------CC-GGGCTGTGGCTATGAAGAC---GCAGCGTGGGAGGCTGGGAGTCGCAG-AGGATGCTGGCCGGAAGATTTCCA-TTAATAGCTGGAGCTCCTGAGCCTGTCCTGGAAGAAGGAAGTGGGCCTGGTCCTGCGAGGGTTTGTAAACCAGCTT--GAGCACATGTCAGTGCGGAGCTCTGAGGTCGGGACC-CCAGCATGCTCACGATAGACATCACACAAATGGGGCAGGAGGACCAAG-------CCCCC--TACC--GTGCCGCTGCTCAG----CTATGTGGGGGTAGCTGTG-GTGAAAC-ACAGAACTCG----CTTAGAAAGATCCCAAGAGGATAATCCacccacagaaaacctggagagtattttgaaacttcctacaggaaatcc-----aggagaaaAGGAGTCCTCTCCAG-TGATG-GGAGGTGGTGC----------------------------------------AGGTCGGGGGCTGCATCAGAAAGGCGGTCGATGGAAGGGAT--GCG-CAGATTCTCGCTGGAGGTGCAGAGGCAGCCACGGA-AGGTGGTGGGTGGGGGCCTTGGGGATTGAGTGGGGGACCTACAGCTGGG-A-TGCTCCGGTTTTGACggaagtagcatcgcct-taggaag-c-aaagacagagattcgagtccaggcctgtagcatcc----ttcaaccacccttaagccctctgagttcctgtgtctgtgaag-tgagcataatgattcccacctca------cagggGGAGG--G-------CAGG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2162037 643 - 8137123 TGGGGAAATAA-GGGTACCTCCTACA-GGTCAAAAGAGATAATGGACCAGAACATGGCCGGACACAGTCACAGCCCT-TGAGGGGAGACTGCTGCAGAGGCC-AGGCTGCCATCACATAGACCCA-------------------------G-GTGGT------------GTCTCTT------------------GGACCCTGTTCTGAAAAGGGGAAGTGGGACT------------------------------GGACACCTGCCA-TGTGGAGCTCC-ACACCAGGGCC-CTGGCATGCCTACCACAGGTGTCACATGAATGGGAAAATGAAACCCAGCTCCCCCCCCCC--CATG--GGGTGGCTGCTCAG------------------CTGTG-CTGAAAC-TCAGGACACAGGATCTTAGAAAAAGCCTGAAGGGAACATCCAC---CACAGAACTGGAAGAATATTTTGAAAATTCTGATAGGAAATCC-----GAGGAAAACCAGGTCCTATCCAGCTGATGTGGACAGGGTGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTAGTTGAGGGGCT-------------------------GAAT--GAA------------------------GAAAGCTACAGG-GGATGGTGGGTTGGGGCT------------------------AGGTGGG-A-GAATCTGGTGTTGGTGGAAAGAATACCAACC-TGAGAGC-C-AGAGAGAT-GGTTCAGGTTCAGCCCTGTGGC-TCc----ttc--------------------agtttctgtgtccgtgaaa-ggagtgcagtgattcctgcctca------cagggtcgGGTTG----------- i otoGar3.GL873611 C 0 C 0 a score=371059.000000 s hg38.chr3_KI270784v1_alt 90608 58 + 184404 ACACTGTGAGATTG-TAAGG-GTCGGTGTCCCTCTTCGCAT-GGAGT--CAGCAGCCGGCTGG s panTro5.chr10 2988 59 + 135926727 AC--TGTGAGATTGCTAAGCCGTCGGT--CCCTCTTCACATTGGAGTTTCAGCAGCAGCCTGG i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 24923 58 - 432965 ACACTGTGAGATTG-TAAGG-GTCGGTGTCCCTCTTCGCAT-GGAGT--CAGCAGCCGGCTGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 88667 58 + 85365473 ACGCTGTGAGATTG-TAAGG-GTGGGTGTACCTCGTCGCAT-GGAGT--CAGCAGCCGGCTGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33929336 58 + 185818997 ACGCTGTGAGATTG-TGAGG-GCTGGAGTCCCTCATTGCGT-GGAGT--CAGCAGCCAGCTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33545273 58 + 192294377 ACGCTGTGAGATTG-TGAGG-GCTGGAGTCCCTCATTGCAT-GGAGT--CAGCAGCCAGCTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4306586 58 - 9440265 acgctgtgagattg-tgagg-gctggaGTCCCTCATTGCAT-GGAGT--CAGCAGCCAGCTGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16896272 58 - 21915920 acgctgtgagattg-tgagg-gctggaGTCCCTCATTGCAT-GGAGT--CAGCAGCCGGCTGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 36111 58 - 21531802 ACGCTGTGAGATTG-TGAGG-GCTGGAGTCCCTCATCGCAT-GGAGT--CAGCAGCCGGCTGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 60144 58 - 2515279 acgctgtgagattg-tgagg-GCTGGAGTCCCTCATTGCAT-GGAGT--CAGCAGCCGGCTGG i manLeu1.NW_012101810v1 I 2232 C 0 s colAng1.NW_012117710v1 216430 58 + 6586416 acgctgtgagATTG-TGAGG-GCTGGAGTCCCTCATCGCAT-GGAGT--CAGCAGCAGGCTGG i colAng1.NW_012117710v1 I 12 C 0 s calJac3.chr2 146582334 58 - 204313951 ACACTGTGAGATTG-TGAGG-GTCTGTGTCCCTCACTGCAT-GGAGT--CAGCAGCTGGCTGG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 419425 58 - 2125214 ACACTGTGAGATTG-TGAGG-GTCTGTGTCCCTCATTGCAT-GGAGT--CAGCAGCCGGCTGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 42406 58 + 376347 ACACCGTGAGATTG-TGAGG-GTCTGTGTCCCTCATTGCAT-GGAGT--CAGCAGCCAGCTGG i aotNan1.NW_018514293v1 C 0 I 35 s otoGar3.GL873611 2162680 48 - 8137123 ACACTG-GAAAACA-CCTGG-ATTTGTGG--------GCAC-CATTC--TGGTAGCCGCCCA- i otoGar3.GL873611 C 0 C 0 a score=136620.000000 s hg38.chr3_KI270784v1_alt 90666 18 + 184404 GCTGAGGGAGGTGTTTCT s panTro5.chr10 3047 18 + 135926727 GCTGAGGGAGGTGTTTCT i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 24981 18 - 432965 GCTGAGGGAGGTGTTTCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 88725 18 + 85365473 GCTGGGGGAGGTGTTTCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33929394 18 + 185818997 GCTGAGGGAGGTGTTTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33545331 18 + 192294377 GCTGAGGGAGGTGTTTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4306644 18 - 9440265 GCTGAGGGAGGTGTTTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16896330 18 - 21915920 GCTGAGGGAGGTGTTTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 36169 18 - 21531802 GCTGAGGGAGGTGTTTCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 60202 18 - 2515279 GCTGAGGGAGGTGTTTCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 216488 18 + 6586416 GCTGAGGGAGGTGTTTCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146582392 18 - 204313951 GCTGAGGGAGGGATTTCT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 419483 18 - 2125214 GCTGAGGGAGGGGTTTCT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2162728 18 - 8137123 GCCCAACAAGGTGTCTCT i otoGar3.GL873611 C 0 C 0 e aotNan1.NW_018514293v1 42464 35 + 376347 I a score=27607.000000 s hg38.chr3_KI270784v1_alt 90684 4 + 184404 GTCC s panTro5.chr10 3065 4 + 135926727 GTCT i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 24999 4 - 432965 GTCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 88743 4 + 85365473 GTCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33929412 4 + 185818997 GTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33545349 4 + 192294377 GTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4306662 4 - 9440265 GTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16896348 4 - 21915920 GTCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 36187 4 - 21531802 GTCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 60220 4 - 2515279 GTCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 216506 4 + 6586416 GTCC i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 419501 4 - 2125214 GTCC i cebCap1.NW_016107703v1 C 0 I 9 s otoGar3.GL873611 2162746 4 - 8137123 GTCT i otoGar3.GL873611 C 0 C 0 e aotNan1.NW_018514293v1 42464 35 + 376347 I e calJac3.chr2 146582410 0 - 204313951 C a score=791286.000000 s hg38.chr3_KI270784v1_alt 90688 168 + 184404 TTAGGTG--------------TCGCAGGCTGGCTCTCGTGCGTCCTTCCTTCCACTTCTCCCCACCTGCATCCACACAGAGaatacacta-cctccataaaac-gcttgcaaggggccactgttctcag-catttcacctgtcaacctcacttaagccttaaa--cagcctatg-atgag----gttctgat s panTro5.chr10 3069 161 + 135926727 TTAGGTG--------------TCGCAGGCTGGCTCTCATGTGTCC--GCTTCAA-TTCTTCCCTACTGCATCCACACAGAG--TACACTAGCCTCTATAAAACCGCTTGCAGAGG--CACT-TTCTCAGGCAT--CACCTGTCAAC-TCACTTAAGCCCTTAA--CAGCCTATGCATGAG----CTTCTGAT i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 25003 168 - 432965 TTAGGTG--------------TCGCAGGCTGGCTCTCGTGCGTCCTTCCTTCCACTTCTCCCCACCTGCATCCACACAGAGaatacacta-cctctataaaac-gcttgcaaggggccactgttctcag-catttcacctgtcaacctcacttaagccttaaa--cagcctatg-atgag----gttctgat i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 88747 168 + 85365473 TTAGGTG--------------TCACAGGCTGGCTCTCATGCGTCCTTCCTTCCACTTCTCCCCACCTGCATCCACACAGAGAATGCACTa-cctctatcgaat-gcttgcaaggggccactgttctcag-catttcacctgtcaacctcacgtaagccttaaa--cggcctgtg-atgag----gctctgat i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33929416 168 + 185818997 TTTGGTG--------------TCACAGGCTGACTCTCGTGCATCCTTCCTTCCGCTTCTCCCCACCTGCATCCACACAGAGaatacacga-cctctattgaat-gcttgcaaggggccactgttcccag-catttcacctgtcaacgtcacttaagccttaaa--cagcctatg-atgag----gttctgat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33545353 168 + 192294377 TTTGGTG--------------TCACAGGCTGACTCTCGTGCATCCTTCCTTCTGCTTCTCCCCACCTGCATCCACACAGAGaatacacga-cctctattgaat-gcttgcaaggggccactgttcccag-catttcacctgtcaacgtcacttaagccttaaa--cagcctatg-atgag----gttctgat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4306666 168 - 9440265 TTTGGTC--------------ACACAGGCTGACTCTCGTGCATCCTTCCTTCCGCTTCTCCCCACCTGCATCCACACAGAGaatacacga-cctctattgaat-gcttgcaaggggccactgttcccag-catttcacctgtcaacgtcacttaagccttaaa--cagcctatg-atgag----gttctgat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16896352 168 - 21915920 TTTGGTG--------------TCACAGGCTGGCTCTCGTGCATCCTTCCTTCCGCTTCTCCCCACCTGCATCCACACAGAGaatacacga-cctctattgaat-gcttgcaaggggccactgttcccag-catttcgcctgtcaacgtcacttaagccttaaa--cagtctatg-atgag----gttctgat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 36191 168 - 21531802 TTTGGTG--------------TCACAGGCTGGCTCTTGTGCATCCTTCCTTCCGCTTCTCCCCACCTGCATCCACACAGAGaatacatga-cctctatcgaat-gcttgcaaggggccactgttcccag-catttcacctgtcaacgtcacttaagccttaaa--cagcctatg-atgag----gttctgat i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 60224 168 - 2515279 TTTGGTG--------------TCACAGGCTGGCTCTCGTGCATCCTTCCTTCCGCTTCTCCCCACCTGCATCCACACAGAGaatacacga-cctctattgaat-gcttgcaaggggccactgtttccag-catttcgcctgtcaacgtcacttaagccttaaa--cagcctatg-atgag----gttctgat i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 216510 168 + 6586416 TTCGGTG--------------TCACAGGCTGGCTCTTGTGCGTCCTTCCTTCGGCTTCTCCCCACCGGCATCCACGCAGAGaatacacga-cctctatcgaat-gcttgcaaggggcccctgttcccag-catttcacctgtcaatgtcacttaagccttaaa--cagcctctg-atgag----gttctgat i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2162750 187 - 8137123 -TTAGAGTCTGCAATGACAGTTCACAGGCTGGTTCGTGTGCACCCTTCTTTCCATCTCTCCTCACATTCATCCTCAAAAAGACTTCACTG-catttactgaac-acttgccaggcaacacagttctcaa-cacttcacctggaaatctcatttaagccttaaaacaaccctatg-atgagggtTGTTCCGAT i otoGar3.GL873611 C 0 I 4 e aotNan1.NW_018514293v1 42464 35 + 376347 I e cebCap1.NW_016107703v1 419505 9 - 2125214 I e calJac3.chr2 146582410 0 - 204313951 C a score=814955.000000 s hg38.chr3_KI270784v1_alt 90856 196 + 184404 agtgtctcccttGGCCTGCTGGAAGGCCCAGTGCTGAAGGACGACTGGGCACCCCGGCTCTTGGGATGGTCAAAGGCTCTCACCTGGACAGGGAGGACCCCCTCCTCTCCCTGGGCCTTCTGCTGCCCTGAGCCCCT-ACTGCTCTCTGCCACAGACTCGGGAGGGAGCATGAGCTGCATCCAACAGGCCGCAGCAG s panTro5.chr10 3230 183 + 135926727 AGTGTCTTCCCTTGCCCGCTGGAAGGCCCAGTGCTGAAGGGCGACTGGGCACCCCGGTTCTTGG-ATGG-CAAAG-CTTTCAC-TGGACAGGGAG-ACCCCC-GCTCTCCT--GACCTTCTGCTGCCCTGAGCCCCTGACTGCTG-CTGCCACAGACTCGAG---GAGCATGAGCTGCATCCAACAG--CGCAGCAG i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 25171 195 - 432965 agtgtctcccttGGCCCGCTGGAAGGCCCAGTGCTGAAGGA-GACTGGGCACCCCGGCTCTTGGGATGGTCAAAGGCTCTCACCTGGACAGGGAGGACCCCCTCCTCTCCCTGGGCCTTCTGCTGCCCTGAGCCCCT-ACTGCTCTCTGCCACGGACTCGGGAGGGAGCATGAGCTGCATCCAACAGGCCGCAGCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 88915 196 + 85365473 agtgtctccCTGGGCCTGCTGGAAGGCCCAGTGCTGAAGGACAACTGGGCACCCCAGCTCTATGGACGGTCACAGGCTCCCACCTGGACAGGGCGGACCCCCTCCTCTCCCTGGGCCTTCTGGTGCCCTGAGCCCCT-ACTGCTCTCTGCCACAGACTTGGGAGGGAGCATGAGCTGCATCCAACAGGCCGCAGCAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33929584 196 + 185818997 agtatcttccttGGCCTGCTAGAAGGCCCAGTGCCTAAGGACGACCGGGCACCCCGGCTCTTGGGATGCTCACAGGCTGTCACCTGGCCAGGGCAGACCCCTTCCTCTCACTGGGCCTTCTGGTGCCCTGAGTCCCT-ACTGCTTTCTGCCACAGACTTGGGAGGGAATGTGAGCTGCATCCAACAGGCTGCAGGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33545521 196 + 192294377 agtatcttccttGGCCTGCTAGAAGGCCCAGTGCCGAAGGACGACCGGGCACCCCGGCTCTTGGGATGGTCACAGGCTGTCACCTGGCCAGGGCAGACCCCTTCCTCTCACTGGGCCTTCTGGTGCCCTGAGTCCCT-ACTGCTTTCTGCCACAGACTTGGGAGGGAATGTGAGCTGCATCCAACAGGCTGCAGGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4306834 196 - 9440265 agtatcttccttGGCCTGCTAGAAGGCCCAGTGCCGAAGGACGACCGGGCACCCCGGCTCTTGGGATGGTCACAGGCTGCCACCTGGCCAGGGCAGACCCCTTCCTCTCACTGGGCCTTCTGGTGCCCTGAGTCCCT-ACTGCTTTCTGCCACAGACTTGGGAGGGAATGTGAGCTGCATCCAACAGGCTGCAGGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16896520 196 - 21915920 agtatcttccttGGCCTGCTAGAAGGCCCAGTGCCAAAGGACGACCGGGCACCCCGGCTCTTGGGATGGTCACAGGCTGTCACCTGGCCAGGGCAGACCCCTTCCTCTCACTGGGCCTTCTGGTGCCCTGAGTCCCT-ACGGCTTTCTGCCACAGACGTGGGAGGGAATGTGAGCTGCATCCAACAGGCTGCAGGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 36359 195 - 21531802 agtgtcttccttGGCCTGCTGGAAGGCCCAGTGCCAAAGGACGACTGGGCACCCCGGCTCCTGGGACGGTCACAGGCTGTCACCTGGCCA-GGCAGACCCCTTCCTGTCACTGGGCCTTCTGGTGCCCTGAGTCCCT-ACTGCTTTCTGCCACAGACTTGGGAGGGAGTGTGAGCTGCATCCAACAGGCTGCAGGAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 60392 196 - 2515279 agtatcttccttGGCCTGCTAGAAGGCCCAGTGCCAAAGGACGACCGGGCACCCCGGCTCTTGGGATGGTCACAGGCTGTCACCTGGCCAGGGCAGACTCCTTCCTCTCACTGGGCCTTCTGGTGCCCTGAGTCCCT-ACTGCTTTCTGCCACAGACTTGGGAGGGAATGTGAGCTGCATCCAACAGGCTGCAGGAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 216678 195 + 6586416 agtgtcctccttGGCCTGCTGGAAGGTCCAGAGCTGAAGGACGACTGGGCA-CTGGGCTTTTGGGATGGTCACAGGCTGTCACCTGGCCAGGGCAGACCCCTTCCTCTCACTGGGCCTTCTGGTGCCCTGAATCCCT-CCTGCTTTCTGCCACAGACTTGGGAGGGAGCGTGAGCTGCATCCAACAGGCTGCAGGAG i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2162937 4 - 8137123 I e aotNan1.NW_018514293v1 42464 35 + 376347 I e cebCap1.NW_016107703v1 419505 9 - 2125214 I e calJac3.chr2 146582410 0 - 204313951 C a score=59717.000000 s hg38.chr3_KI270784v1_alt 91052 13 + 184404 GTCCCGGCCTCTC s panTro5.chr10 3413 13 + 135926727 GTCCCGCGCTCTC i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 25366 13 - 432965 GTCCCGGCCTCTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 89111 13 + 85365473 GTCCCGGCCTCTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33929780 13 + 185818997 GTCCTGACCTCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33545717 13 + 192294377 GTCCTGACCTCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4307030 13 - 9440265 GTCCTGACCTCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16896716 13 - 21915920 GTCCTGACCTCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 36554 13 - 21531802 GTCCCGACCTCTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 60588 13 - 2515279 GTCCTGACCTCTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 216873 13 + 6586416 GTCCCGACCTCTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146582410 13 - 204313951 GTCCCAGCCGCTG i calJac3.chr2 C 0 C 0 e otoGar3.GL873611 2162937 4 - 8137123 I e aotNan1.NW_018514293v1 42464 35 + 376347 I e cebCap1.NW_016107703v1 419505 9 - 2125214 I a score=1709062.000000 s hg38.chr3_KI270784v1_alt 91065 252 + 184404 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTGC--AGTAAAGGCCTAGC--GACCCGGGTGGGCATGGGGCACACGTTCCTACTCTGGCATTA-GAGG-TCATGCCACTGC-TTGTCTTTATCATTCTACCCAG-TGTCCTGCGAG-GAC-TTGGTCCTCAGGTGGGTCACAAGTCTCCAGTCCATTAATTAACTGGTCGGAAGTGAGTCCCGGTCTATCCCTGTGAGGAGCAGGG-GGACTGGCACCTCAT-TTCCTCG s panTro5.chr10 3426 251 + 135926727 AG-ACCCAAACACAGACAGAG-CAGTGCCTCGGCTGCCCAGTAAAGGCCTAGCCCGACCCGG-TGTGGATGGG-CACACGTTCCTACTCTGGCATTAAGAGGGTCATGC-ACTGCATTGTCTTTACCATTCTACCCAGCTGTCCTGCGAGCGACCTTGGTCCTCAGGTGGGTCACAAGGCTCTAGTCCATTAATTA-CTGC---GAAGTGAGTCC-GGTCCATCC-TGGAGCGAGCAGGG-GGACTG-CACCTTATATTCCTCG i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 25379 252 - 432965 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTAC--AGTAAAGGCCTAGC--GACCCGGGTGGGCATGGGGCACACATTCCTACTCTGGCATTA-GAGG-TCATGCCACTGC-TTGTCTTTACCATACTACCCAG-TGTCCTGCGAG-GAC-TTGGTCCTCAGGTGAGTCACAAGTCTCCAGTCCATTAATTAACTGGTCGGAAGTGAGTCCCGGCCCATCCCTGTGAGGAGCAGGG-GGACTGGCACCTCAT-TTCCTCG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 89124 252 + 85365473 AGCACCCAAGACCAGAGAGAGGCAGTGCCTCGGCTGC--AGTAAAGCCCTAGC--GACCAGGGTGGGCATGGGGCACACGTTCCTGCTGTGGCACTA-GAGG-TCATGCCGCTGC-TTGTCTTCACCATTCTACCCAG-TGTCCTGCGAG-GAC-TTCATCCTCAGGTGGGTCACAAGTCTCCAGTCCATTAATTAACCAGTCGGAAGTGAGTCCCGGTCCATCCCTGTGAGGAGCAGGG-GGACTGGCACCTCAT-TTCCTCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33929793 251 + 185818997 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTGC--AGTAAAGGCCTAGC--GACCCAGGTGGGCATGGGGCACATGTTCCTACTTTGGCATTA-GAGG-TCATGCCACTGC-TTGTCTTTGCCGTTCTACCCAG-TGTCCTGGGAG-GAC-TCGCTCCTCACATGGGTCACGTGTCTCCAGTCCATTAA-TAGCCGGTCGGAAGTGAGTCCTGGTCCATCCCTGTGAGAAGCCAGG-GGACTGGCCCCTCAT-TTCCTCG i rheMac8.chr3 C 0 I 76 s macFas5.chr3 33545730 251 + 192294377 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTGC--AGTAAAGGCCTAGC--GACCCGGGTGGGCATGGGGCACATGTTCCTACTTTGGCATTA-GAGG-TCATGCCACTGC-TTGTCTTTGCCGTTCTACCCAG-TGTCCTGGGAG-GAC-TCGCTCCTCACATGGGTCACGTGTCTCCAGTCCATTAA-TAGCCGGTCGGAAGTGAGTCCTGGTCCATCCCTGTGAGAAGCCAGG-GGACTGGCCCCTCAT-TTCCTCG i macFas5.chr3 C 0 I 76 s macNem1.NW_012019910v1 4307043 251 - 9440265 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTGC--AGTAAAGGCCTAGC--GACCCGGGTGGGCATGGGGCACATGTTCCTACTTTGGCATTA-GAGG-TCATGCCACTGC-TTGTCTTTGCCGTTCTACCCAG-TGTCCTGGGAG-GAC-TCGCTCCTCACATGGGTCACGTGTCTCCAGTCCATTAA-TAGCCGGTCGGAAGTGAGTCCTGGTCCATCCCTGTGAGAAGCCAGG-GGACTGGCCCCTCAT-TTCCTCG i macNem1.NW_012019910v1 C 0 I 76 s cerAty1.NW_012002954v1 16896729 251 - 21915920 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTGC--AGTAAAGGCCTAGC--GACCCGGGTGGGCATGGGGCACATGTTCCTACTTTGGCATTA-GAGG-TCATGCCACTGC-TTGTCTTTGCCGTTCTACCCAG-TGTCCTGGGAG-GAC-TCGCTCCTCACATGGGTCACGTGTCTCCAGTCCATTAA-TAGCCGGTCGGAAGTGAGTCCTGGTCCATCCCTGTGAGAAGCCAGG-GGACTGGTCCCTCAT-TTCCTCG i cerAty1.NW_012002954v1 C 0 I 76 s chlSab2.chr28 36567 251 - 21531802 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTGC--AGTAAAGGCCTAGC--GACCCAGGTGGGCATGGGGCACACGTTCCTAC-TTGGCATTA-GAGG-TCATGCCACTGC-TTGTCTTTGCCATTCTACCCAG-TGTCCTGGGAG-GAC-TCGCTCCTCACGTGGGTCACATGTCTCCAGTCCATTAATTAGCCGGTTGGAAGTGAGTCCTGGTCCAACCCTGTGAGAAGCCAGG-GGACTGGCCCCTCAT-TTCCTCG i chlSab2.chr28 C 0 I 24 s manLeu1.NW_012101810v1 60601 251 - 2515279 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTGC--AGTAAAGGCCTAGT--GACCTGGGTGGGTATGGGGCACATGTTCCTACTTTGGCATTA-GAGG-TCATGCCACTGC-TTGTCTTTGCCGTTCTACCCAG-TGTCCTGGGAG-GAC-TCGCTCCTCACATGGGTCACGTGTCTCCAGTCCATTAA-TAGCCGGTCGGAAGTGAGTCCTGGTCCATCCCTGTGAGAAGCCAGG-GGACTGGTCCCTCAT-TTCCTCG i manLeu1.NW_012101810v1 C 0 I 76 s colAng1.NW_012117710v1 216886 251 + 6586416 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTGC--AGTAAAGGCCTAGC--GACCCGGGTGGGCATGGGGCACACGCTCCTACTTTGGCATTA-GAGG-TCATGCCACTAC-TTGTCTTTGCCATTCTACCAAG-TGTCCTGGGAG-GAC-TCGCTCCTCATGTGGGTCACGTGTCTCCAGTCCATTAA-TAGCTGGTCGGAAGTGAGTCCTGGTCCAGCCCTGTTAGAAGCCGGG-GGACTGGCCCCTCGT-TTCCTCG i colAng1.NW_012117710v1 C 0 I 102 s calJac3.chr2 146582423 253 - 204313951 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTGC--AGTAAAGGCCAAGC--GTCCCAGATGGGCGTGGAGCACTCATTCCTGCTTTGGCATTA-GAGG-TCATGCCACTGT-TTATCTTTACTGTTCCACCCAG-TGCCCTGAGAG-GAC-TCGGTCCTCAGATGAGTCACATGTCTCCAGTCCATTAATTAACTGGTCAGAAGTGGGTCCCGGTCCATTCCTGTGAGGAGCTGGGTGGACTGGCACCTCAT-TTCCTCA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 419514 253 - 2125214 AGCACCCAAGACCAGACAGAGGCAGTGTCTTGGCTGC--AGTAAAGGCCAAGA--GCCCCGGGTGGGTGTGGAGCACCCATTTCTACTTTGGCATTA-GAGG-TCATGCCACTGT-TTATCTTTATTGTTCCACCCAG-TGCCCTGTGAG-GAC-TTGGTCCTCAGATGAGTCACATATCTCTAGTCTGTTAATTAACTGGTCAGAAATGGGTCCTGGTCCATCCCTGTGAAGAGCCGGGGGGACTGGCACCTCAT-TTCATCG i cebCap1.NW_016107703v1 I 9 C 0 s aotNan1.NW_018514293v1 42499 253 + 376347 AGCACCCAAGACCAGACAGAGGCAGTGCCTTGGCTGC--AGTAAAGGCCAAGC--GCCCCGGGTGGGCATGGAGCACGCGTTCCTACTTTGGCATTA-GAGG-TCACGCCTCTGT-TTATCTTTACTGTTCCACCCAG-TGCCCTGTGAG-GAC-TCGGTCCTCAGATGAGTCACGTGTCTCCAGTCCATTAATTAACTGGTCGGAAGTGGGTCCCGGTCCATCCCTGTGAGGAGCCGGGGGGACTGGCACCTCAT-TTCCTCG i aotNan1.NW_018514293v1 I 35 C 0 e otoGar3.GL873611 2162937 4 - 8137123 I a score=2278405.000000 s hg38.chr3_KI270784v1_alt 91317 324 + 184404 TGGACTCATGGCCCTACACAACGACATGCCTGGCCTTCCTGGACTCATGCACTCACTCCAGAAGGA-CATTTGCTTTGAGCTCGCCTG-GTGGA----TGGGGTGCCCCTGAACAGCTAACCATCTGTTGACATTTCCACCATGAGAAAGTTC-CTCCAGGCAGCGCCCAGCTAGTGCTCCAAAGAGGTGCAGAATCT--GAGAAATTATGTGG-TCCACAG-TCAACAGCTAACAACATTCATAGGACCTTA--TTAGCCACCAGCTTGGAGAAGGCCGGTGTCCAGAATAAATCAAATCCTTCATAACTGTCAG-ACGGTGGTGATTCA-GTCAAAT s panTro5.chr10 3677 330 + 135926727 TGGACTCATGGCCCTACACAATGACACGCCTGGCCTTCCTGGACTC-TGCACTCACTCCAGAAGGAACATTTGCTT-GAGCTCGCCTGCGTGGAATGGTGGTCTGCCC-TGAACATCTAAC-ATCTGCTGACATTTCCACCATCAGAAAGTTCTCTCTAGGCAGCGCCCGGCTAGTGCTCCAAAGAGGTGCAGAATTT-TGAGAAATTATGTGG-TCCACAGGTCAACAGCTAACAACATTTCAGCGACCTTA--TTAGC-GCCAGCTTGGAGAAGGCACGTGCCCAGAATAAATCAAATCCTTCATAACTGTCAGGACGGTGGTGATTCGCGTCAAAT i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 25631 325 - 432965 TGGACTCATGGCCCTACACAACGACACGTCTGGCTTTCCTGGACCCATGCACTCACTCCAGAAGGA-CATTTGCTTTGAGCTCGCCTG-GTGGA----TGGGGTGCCCCTGAACATCTAACCATCTGTTGACATTTCCACCATCAGAAAGTTC-CTCTAGGCAGCG-CCAGCTAGTGCTCCAAAGAGGTGCAGAATCTCTGAGAAATTATGTGG-TCCACAG-TCAACAGCTAACAACATTTATAGGACCTTA--TTAGCCGCCAGCTTGGAGAAGGCCAGTGTCCAGAATAAATCAAATCCTTCATAACTGTCAG-ACGGTGGTGACTCG-GTCAAAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 89376 324 + 85365473 TGGACTCGTGGCCCTACACAACGACACGCCCGGCCTTCCTGGACCCATGCACTCACTCCAGAAGGA-CATTTGCTTTGAGCTGGCCTG-GTGGA----TGGGATGCCCCAGAACATCTAACCATCTGTTGACATTTCCACCATCAGAAAGTTC-CTCTAGGCAGCGCCCAACCAGTGCTCCAAAGAGGTGCAGAATCT--CAGAAATTCTGTGG-TCCACAG-TCATCAGCTAACAACATTTATAGGACCTTA--TTAGCCACCAGCTTGGAGAAGGCCGGTGTCCAGAATAAATCAAATCCTTCAGAATTGTCAG-ACGGTGGCGACTCG-GTCAAAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33930120 327 + 185818997 TGGACTCAGGGCCCCACACAATGACACGCCTGGCCTTCCTGGACCCATGCACTCACTCCAAAAGAA-AGTTTGCTTTGAGCTCGCCTG-GTGGA----CGGGATGCCCCTGAACATCTAACCATCTGTTGACATTTCCACCACCGGAAAGTTC-CTCCAGGCAGCGCCCAGCCAGTGCTCCAAAGAGGTGCAGAATCTCTGAGAAATTATGTGG-CCCACAG-TCATCAGCTAACAACATTTTTAGGACCTTGTTTTAGCCACCAGCTTGGAGAAGGCCGGGGTCCAGAATAAATCAAATCC-TCAGAATTGTCAG-ACGGTGGTGGCTCA-GTCAAAC i rheMac8.chr3 I 76 C 0 s macFas5.chr3 33546057 327 + 192294377 TGGACTCAGGGCCCCACACAATGACACGCCTGGCCTTCCTGGACCCATGCACTCACTCCAAAAGAA-AGTTTGCTTTGAGCTCGCCTG-GTGGA----CGGGATGCCCCTGAACATCTAACCATCTGTTGACATTTCCACCACCGGAAAGTTC-CTCCAGGCAGCGCCCAGCCAGTGCTCCAAAGAGGTGCAGAATCTCTGAGAAATTATGTGG-CCCACAG-TCATCAGCTAACAACATTTTTAGGACCTTGTTTTAGCCACCAGCTTGGAGAAGGCCGGGGTCCAGAATAAATCAAATCC-TCAGAATTGTCAG-ACAGTGGTGGCTCG-GTCAAAC i macFas5.chr3 I 76 C 0 s macNem1.NW_012019910v1 4307370 327 - 9440265 TGGACTCAGGGCCCCACACAATGACACGCCTGGCCTTCCTGGACCCATGCACTCACTCCAAAAGAA-AGTTTGCTTTGAGCTCGCCTG-GTGGA----CGGGATGCCCCTGAACATCTAACCATCTGTTGACATTTCCACCACCGGAAAGTTC-CTCCAGGCAGCGCCCAGCCAGTGCTCCAAAGAGGTGCAGAATCTCTGAGAAATTATGTGG-CCCACAG-TCATCAGCTAACAACATTTTTAGGACCTTGTTTTAGCCACCAGCTTGGAGAAGGCCGGGGTCCAGAATAAATCAAATCC-TCAGAATTGTCAG-ACGGTGGTGGCTCG-GTCAAAC i macNem1.NW_012019910v1 I 76 C 0 s cerAty1.NW_012002954v1 16897056 327 - 21915920 TAGACTCAGGGCCCCACACAATGACACGCCTGGCCTTCCTGGACCCATGCACTCACTCCAAAAGAA-AGTTTGCTTTGAGCTCACCTG-GTGGA----CGGGATGCCCCTGAACGTCTAACCATCTGTTGACATTTCCACCACCGGAAAGTTC-CTCCAGGCAGCGCCCAGCCAGTGCTCCAAAGAGGTGCAGAATCTCTGAGAAATTATGTGG-CCCACAG-TCATCAGCTAACAACATTTTTAGGACCTTGTTTTAGCCACCAGCTTGGAGAAGGCTGGGGTCCAGAATAAATCAAATCC-TCAGAATTGTCAG-ACGGTAGTGGCTCG-GTCAAAC i cerAty1.NW_012002954v1 I 76 C 0 s chlSab2.chr28 36842 328 - 21531802 TGGACTCAGGGCCCCACACAATGACACGCCTGGCCTTCCTGGACCCATGCACTCACTCCAGAAGAA-AGTTTGCTTTGAGCTCGCCTG-GTGGA----CGGGATGCCTCTGAACATCTAACCATCTGTTGACATTTCCACCACCGGAAAATAC-CTCCAGGCAGCGCCCAGCCAGTGCTCCAAAGAGGTTCAGAATCTCTGAGAAATTATGTGGCCCCGCAG-TCATCAGTTTACAACATTTTTAGGACCTTGTTTTAGCCGCCAGCTTGGAGAAGGCCGGGGTCCAGAATAAATCAAATCC-TCAGAATTGTCAG-ATGGTGGCGGCTCG-GTCAAAC i chlSab2.chr28 I 24 C 0 s manLeu1.NW_012101810v1 60928 327 - 2515279 TGGACTCAGGGCCCCACACAATGACACGCCTGGCCTTCCTGGACCCATGCACTCACTCCAAAAGAA-AGTTTGCTTTGAGCTCACCTG-GTGGA----CGGGATGCCCCTGAACGTCTAACCATCTGTTGACATTTCCACCACCGGAAAGTTC-CTCCAGGCAGCGCCCAGCCAGTGCTCCAAAGAGGTGCAGAATCTCTGAGAAATTATGTGG-CCCACAG-TCATCAGCTAACAACATTTTTAGGACCTTGTTTTAGCCACCAGCTTGGAGAAGGCTGGGGTCCAGAATAAATCAAATCC-TCAGAATTGTCAG-ATGGTAGTGGCTCG-GTCAAAC i manLeu1.NW_012101810v1 I 76 C 0 s colAng1.NW_012117710v1 217239 327 + 6586416 TGGACTCAGGGCCCCACATAACCACATGCCTGGCCTTCCTGGACCCATGCACTCACTCCAGAAGAA-AGTTTGCTTTGAGCTCGCCTG-GTGGG----CATGATGCCCCTGAACATCTAACCATCTGTTGACATTTCCACCACCGGAAAGTTC-CTCCAGGCAGCGCCCAGCCAGTGCTCCAAAGAGGTGCAGAATCTCTGAGAAAGTATGTGG-CCCACAG-TCACCAGCTAACAACATTTTTAGGACCTTGTTTTAGCCACCAGCTTGGAGAAGGCCGGGGTCCAGAATAAATCAAATCC-TCAGAACTGTCAG-ACGGTGGTGGCTCG-GTCAAAC i colAng1.NW_012117710v1 I 102 C 0 s calJac3.chr2 146582676 317 - 204313951 --------TGGCCCCACACAATGACATGCCTGGCCTTCCTGGA-CCATGCGCTCACTCCAGAAGAA-AGTTTGCTTTAGGATCGCCTG-GTGGA----CGGGACGCCCCTGAACATCTAGCCATCTGTTGACATTTCCAGCATCAGAAAGTTC-CTCTCGGCAGTGCCGGGCCACTGCTCCAAAGAGGTGCAGAATCTCTGAGAAATTATGTGG-CCCACAG-TCATCAGCTAACAACCTTTCTAGGACCTTG--TTCACCACCAGCTTGGAGAAGGCTGGTGTCCAGAGTAAATCAAATCCTCCAGAATTGTCAG-ATGGTGGCGACTCA-GTCAAAT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 419767 318 - 2125214 --------TGGCCCCACACAATGACATGCCTGGCCTTCCTGGACCCATGCACTCACTCCAGAAGAA-GGTTTGCTTTGGGCTCGCCTG-GTGGA----CAGGACGCCCCTGAACATCTAACCATCTGTTGACATTTCCACCATCAGAAGATTC-CTCCAGGCAGCACCCAGCCAGTGCTCCAAAGAGGCGCAGAATCTCTGAATAATTATGTGG-CCCACAG-TCATCACCTAACAACCTTTCTAGGACCTTG--TTCACCACCAGCTTGGATAAGCCTGGTGTCCAGAGTAAATCAAATCCTTCAGAATTGTCAG-ACGGTGGCGACTCG-GTCAAAT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 42752 318 + 376347 --------TGGCCCCACACGATGACACGCCTGGCCTTCCTGGACCCATGCACTCACTCCAGAAGAA-GGTTTGCTTTGGGCTCGCCTG-GTGGA----TGGGACGCCCCTCAACATCTAACCATCTGTTGACATTTCCACCATCAGAAAGTTC-CTCCAGGCAGCGCCCGGCCAGTGCTCCAAAGAGGTGCAGAATCTCTGAGAAATTATGTGG-CCCACAG-TCATCAGCTCACAGACTTTCTAGGACCTTG--TTCAGCACCGGCTTGGAGAAGGCTGGTGTCCGGAGTAAATCAAATCCTTCAGAATTGTCAG-ACGGTGGCGACTCG-GTCAAAT i aotNan1.NW_018514293v1 C 0 I 18 e otoGar3.GL873611 2162937 4 - 8137123 I a score=48496.000000 s hg38.chr3_KI270784v1_alt 91641 11 + 184404 CTCAGTCAAAA s panTro5.chr10 4007 11 + 135926727 CTCGATCAAAA i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 25956 11 - 432965 CTCGGTCAAAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 89700 11 + 85365473 CTCTGTCAAAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33930447 11 + 185818997 CTCGGTCAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33546384 11 + 192294377 CTCGGTCAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4307697 11 - 9440265 CTCGGTCAAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16897383 11 - 21915920 CTCGGTCAAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 37170 11 - 21531802 CTCGGTCAAAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 61255 11 - 2515279 CTCGGTCAAAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 217566 11 + 6586416 CTCGGTCAAAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146582993 7 - 204313951 ----CTACAGA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 420085 7 - 2125214 ----CTACAGA i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2162937 4 - 8137123 I e aotNan1.NW_018514293v1 43070 18 + 376347 I a score=81834.000000 s hg38.chr3_KI270784v1_alt 91652 17 + 184404 GAT-GCTCTGGCCAAAGT s panTro5.chr10 4018 18 + 135926727 GATTGCTCTGGCCAAAGT i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 25967 17 - 432965 GAT-GCTCTGGCCAAAGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 89711 17 + 85365473 GAT-GCTCTGGCCAAAGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33930458 17 + 185818997 GAC-GCTTTGGCCaaagt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33546395 17 + 192294377 GAC-ACTTTGGCCAAAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4307708 17 - 9440265 GAC-GCTTTGGCCaaagt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16897394 17 - 21915920 GAC-GCTTTGGCCAAAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 37181 17 - 21531802 GAC-GCTTTGGCCAAAGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 61266 17 - 2515279 GAC-GCTTTGGCCAAAGT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 217577 17 + 6586416 GAT-GCTTTGGCCaaagt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146583000 11 - 204313951 GAG-GCTATAGT------ i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 420092 11 - 2125214 GAT-GCTGTAGT------ i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2162941 17 - 8137123 GAT-GCTTTGGTCATGGG i otoGar3.GL873611 I 4 C 0 e aotNan1.NW_018514293v1 43070 18 + 376347 I a score=12269239.000000 s hg38.chr3_KI270784v1_alt 91669 1852 + 184404 CAACAGAGAGCAGAAGCAACTTGCTTTT--GCTGGTCCCTCAGCAAGA-CCACACAGGGAGATTTGCAGGCAATAAA-CAATGTTGCCTAAAACTTTCCCGTGAGGTG-GGAATTGCTTTCATC---CAGATAAGAAGGTGCCGGCCCAGGGGAGGTGTGGGTGGCCAAGCCAGGGAGGGGGGCCCTCACGTGGCCTCAAGAGATCAGCAGCCAGGAGTTAGC-TCTCTCCACAGCACGCCGAAACGGCTCCACGCCTCTGCTGGTGTTTTTATAGGAACCCCTTTTGTGTGTTTGCTTCCTAGCTCAGACTTGAGT-CAAATGGTCTA-TTAATTAG-GGTAGATTTAGTCACTCCTGACATCAGCTTGTGTGGTTCGAGCAGCCCAAGGGGA-AGAGACAGGGCCTCCTTTATGCAGACCCCGCAGTCTTCAGAGGACTG-GACACAGCCCTGGCCCTGCTGCTGTCTGCCGTGCCTTTTGCTCCCTGGGTTTCATTCCTTGGTCTG-TACCTTGAATATAAGGAGAT-CCGTTTGT-ACATTTTGCTCTC-G-TGCATTATACCAAAGGA--AAAGAGAAG-ATAGT-AG-TTTAAAGCTCCCAACAC-TTTTCATGTTCTGAGCCTTTA-GGTCTCCC-ATATGGTAGAGAATCCACAAATATCAGAGGACCCCAAACCTCGCCCGAGATGAAA---CAGCTTTGAGGCTTCCAGGGATCCCTCAGAAGGCTGCACCCA---GGCCGGCCACACGTGAAAACGCGATGGCTCTTTTCTTCTCTGTTCACTGT-AGTTTTATCAGACAGAGCTCTAAACCAGTTTATTCAAT--GACACG--GAGTGATTCTTTCCT--GTCTCTG-CTTGTCCAGTGTGTGACAAGAG-T-------TGAGAAGTGGGGAGACACA--GG-GGGCACATTGAATGCAGGTG-GTCTTACCCGCCTCACTCAGGATGCACGTCTTGC--CTGG-CTAGGCTTG-GCCT-CCTCTGCACTGTGTGCCCCTCTAAATGAAGCGTGACCCTTCTTCCC-CCACCTCATTGGTGGTTCTCTGCCCCCATGAGCTCAGCCAGCTGCTTCCCTGA--CACATGCAGGTCCTAGCCTGGACGAGACAGAGCAACAAAGGCCGAGTG----GGGACGAACACTGGCCTG-GCTTT-CAGGTCCACCTTTGCCTCACG-CAGATGCTTCTCTACCCTTT-ATGAT-TG-AGATCCTGGAGC-AGGGGATCA--CCTAGTTGTAAGGACCATAAAGTGGAGAAGGAGCAGG-GAGCGGTTAGGACCATTGCTGCAAGCTCCTGGTGTCCCTGACA--G-TGAGAGAGGCAGGACACTCGCCTGG--GCTGGGCCTGAGGATG-CTGCTTTCCCCTCTGCATGCCTGGG-GTCCAACGAGGG--TCATGGGACCCAGGAACGT-CTCTGC-AACTC-T-GTCTGTAAACATCCAGGAGCTAATTGT------GACCTGGAAGTCATTTGGAACTCAGCACAGAGGCCTTCAGAAGTCCCTGCCTTCAGATAAGGGCAGGTGCTTACTCTCCC-AGTGGCTAGCACTGTTAAAAACAGACTTT----TTTTTTTctatagccaacatcataacaaatgatgaaatactc-aataact----ccccct-aaaacggggagaaagggaaggg-----tttctgt-------ttttgttttcatctcttctagtgagcattgggctggg---aggttccagccagtgc-aaagagatgagg-aaaagaaa----agtataaatattggaaagaaataagtaaaactatcc-tcatttacaggtgaaatgaggtggcaaatcctaagggatccacaaaaaatcaacttgaa-ccaataagtgaattctgcaacatcacaggacaccaagtcaatatgtaaagatcagttgtatttctatatactactgatgactaatttaaaa s panTro5.chr10 4036 1848 + 135926727 CAACAGAGAGACGAAGCAACTTGCTTTTTTGCCTGTCCTCAAGCAAGA-CAGCACAGGGAGATTTGCAGGCAATAAAACAATGTTGCCTAAAACTTTCCCGTGAGGGGTGGAATTG-TTTCATC---CAGATAAGAAGTCGCC-----ACGCGAG-TGTGGGTGCCACAGCCAGGGATGGAG-CCCTCACGTGGCCTCAAGAGATCAGCACCCAG-AGTCAGCCTCTCTCCACGGCACGCCAAAACGGCCTCACGCCTCTGCTGGTGTTTTTATAGGAACCC-TTTTGTGTGTTTGCTTCCTAGCTCGGACTTGAGTTCAAATGGTCTAGTTAATTAGCGGTA-ATTTAGTCACTCCT-ACATCAGCTTG-GCGGTTCGAGCAGCCCAAGGG-A-AGAGACAGTGCCTCTTTTATGCAGACCCCACAGTCTTCAGAGGATTGCGACACAGCCCTG-CCCTGCTGCTGTCTGCCGTGCCTTTTGCTCCCTGG-TTTCATTCCTCGGTCTGCTACCTTGAATATACGCGGATGCCGTTTGTTACATTTTGCTCTC-GCTGCAT-ATAC--AAGGA--AAA-AGAAGCATAGT-AGCTTTAAAGCTCC-AACA--TTTTCATGTTCTGAGCCTTTATGGTCTCCC-ATATGGTAGAGAATCAACAATCATCAGAGGACCCCAAACCTGGCCGAGCATGAAAAAACAGCTTTGAGGCTTCCAGGCATCCCTCAGAAGGCTGCACCCA---GGCCAGCCACACATGAAAACGTGAAGGCTCTTTTCCTCTCTGTTCACTGT-GCTTTTATCAGACAGAG-TCTAGCTGGGTTTATTCAATTGGACATGCTGAG-GATTCTCTCCTCGCTCTCTGCCTTATCAGCTGTGTGACAAGAGCT-------TGAGAAGT-GGGAGACACA--GGCGGGCA-ATTGAATGCAGGTGCGTCTCACCGCCCTCACTCAGGATGCA-ATCTTGC--CTGGCCTAGGCTTACGTCT-CCTCTGCACTGTGTG-CCCTCTAAATGAAGCATGGCCCTTCTTCCC-CCACCTCA-TGGTGGTTCTCTG-CCCCATGAAGCCAGCCAGCTGCTTCCCTGA--CACATGCAGGT-CTAGCCTGGAGGAA--TGAGCCAACAAGGCCGAGTG----GGGACGAACACTGGCCTGCGCTTTACAGGT-CACCTTTGCCTCACGACAGATGCTTCTCTACCCTTTAATGGTCTGAAGATCCTGGAGCAAGGGGATCAACCTTAGTCGTAAGGACCATAAAGT-TAGAA-GAGCA-G-GAGAGGTTAGGACCAGTGCTGCAAGTTCCTGGTGTCCCTGACAT-G-AGAGGGAGGCAGGACACTCACCTGG--GCTGGGCCTGAGGATGCCTGCTTT---CTCTGCATGCCTGGGCGTGCAACGAGGGTTTCATGGGA-CCAGGAACGTCCTCTGCAAACTCTT-ATCTGTA---CTCCAGGAGCTAATTGT------GACCTG--AATCTTCTGGAAC-CAGCACAGAG---CTCAGAAGT-CCTGCCTTCAG--AAGGGCAGGTGCTTACTCT-CC-AGTGGCTAGCACTGCTAAAAACAGGC-------TTTTTTTctatagccaacatcataac-aatgatgaaatactcaaataact-----cccct-aaacgcgggagaaa-ggaagggttcgctttctttttttttattttgttttcatctcttcta-tgagcattgggctgcg---aggttccagccagtgc-aaag-gatgaggcaaaagaaa---gagtataaatattggaaagaaataagtaaaactatctgtcatttacaggtgaaat-aggtagcaaatcctaa-ggatccaccaaaaatcaa--tgaacccaataaggtgattctgc-acatcata-gacaccaagtcaatatgt-aagatcagttgtatttctatatatacttgatgactaatttaaaa i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 25984 1842 - 432965 CAACAGAGAGCAGAAGCAACTTGCTTTT--GCTGGTCCCTCAGCAAGA-CCACACAGGGAGATTTGCAGGCAATAAA-CAATGTTGCCTAAAACTTTCCCGTGAGGTG-GGAATTGTTTTCATC---CAGATAAGAAGGTGCCAGCCCAGGGGAGGTGTGAGTGGCCAAGCCAGGGATGGAG-CCCTCACGTGGCC-CAAGAGATCAGCAGCCAAGAGTTAGC-TCTCTCCACGGCACGCCGAAACGGCTCCACGCCTCTGCTGGTGTTTTTATAGGAACCCCTTTTGTGTGTTTGCTTCCTAGCTCGGACTTGAGT-CAAATGGTCTA-TTAATTAG-GGTAGATTTAGTCACTCCTGACATCAGCTGT-GTGGTTCGAGCAGCCCAAGGGGA-AGAGACAGGGCCTCCTTTATGCAGACCCCGCAGTCTTCAGAGGACTG-GACACAGCCCTGGCCCTGCTGCTGTCTGCCGTGCCTTTTGCTCCCTGGGTTTCATTCCTCGGTCTG-TACCTTGAATATACGGAGAT-CCGTTTGT-ATATTTTGCTCTC-G-TGCATTATACCAAAGGA--AAAGAGAAG-ATAGC-AG-TTTAAAGCTCCCAACAT-TTTTCATGTTCTGAGCCTTTA-GGTCTCCC-ATATGGTAGAGAATCCACAAATATCAGAGGACCCCAAACCTCGCCCGAGATGAAA---CAGCTTTGAGGCTTCCAGGGATCCCTCAGAAGGCTGCACCCA---GGCCGGCCACACGTGAAAACGTGATGGCTCTTTTC-TCTCTGTTCACTGT-GGTTTTATCAGACAGAGCTCTAAACCAGTTTATTCAAT--GACATG--GAGTGATTCTCTCCT--GTCTCTG-CTTGTCCAGTGTGTGACAAGAG-T-------TGAGAAGTGGGGAGACACA--GG-GGGCACATTGAATGCAGGTG-GTCTCACCCACCTCACTCAGGATGCACGTCTTGC--CTGG-CTAGGCTTG-GCCT-CCTCTGCACTGTGTGCCCCTCTAAAT-AAGCATGGCCCTTCTTCCC-CCACCTCATTGGTGGTTCTCTGCCCCCATGAGCTCAGCCAGCTGCTTCCCTGA--CACATGCAGGTCCTAGCCTGGAGAGA--CGGAGCAACAAGGCCGAGTG----GGGACGAACACTGGCCTG-GCTTT-CAGGTCCACCTTTGCCTCACG-CAGATGCTTCTCTACCCTTT-ATGAT-TG-AGATCCTGGAGC-AGGGGATCA--CCTAGTTGTAAGGATCATAAAGTGGAGAAGGAGCAGG-GAGAGGTTAGGACCATTGCTGCAAGCT-CTGGTGTCCCTGACA--G-TGAGAGAGGCAGGACACTCGCCTGG--GCTGGGCCTGAGGATG-CTGCTTTCTCCTCTGCATGCCTGGG-GTCCAACGAGCG--TCATGGGACCCAGGAACGT-CTCTGC-AACTC-T-GTCTGTAAACATCCAGGAGCTAATTGT------GACCTGGAAGTCATTTGGAACTCAGCACAGAGGCCTTCAGAAGTCCCTGCCTTCAGATAAGGGCAGGTGCTTACTCTCCC-AGTGGCTAGCACTGTT-AAAACAGAC-TT----TTTTTTTctatagccaacatcataacaaatgatgaaatactc-aataact----ccccct-aaaacggggagaaagggaaggg-----tttctgt-------ttttgttttcatgtcttctagtgagcattgggctggg---aggttccagccagtgc-aaagagatgagg-aaaagaaa----agtataaatattggaaagaaataagtaaaactatcc-tcatttacaggtgaaatgaggtggcaaatcctaagggatccacaaaaaatcaacttgaa-ccaataagtgaattctgcaacatcacaggacaccaagtcaatatgtaaagatcagttgtatttctatatactactgatgactaatttaaaa i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 89728 1818 + 85365473 CAGCAGAGAGCAGAAGGGACTTGCTTTT--GCTGGTGTCTCAGCAAGA-CCACACAGGGAGATTTGCAGGCAATAAA-CAATGTTGCCTAAAACTTCCCCATGAGGTG-GGAATTGTTTTTATC---CAGATAAGAAGGTGCCGGCCCAGGGGAGGTGTGGGTGGCCAAGCCAGGGATGGAT-CCCTCACGTGGCCTCAAGAGATCAGCACCCAGGGGTCAGC-TCTCTCCACGACACGCCGAAACGGTTCCACGCCTGTGCTGGTGTTTTTAGAGGAACCCCTTTCGTGTGTTTGTTTCCTAGCTCGGACTTGGGT-CAAATGGTCTA-TTAATTAG-GGTAGACTTAGTCACTCCTGACATCAGCTCGTGTGGTTCGAGCAGCCCAAGGGGA-AGAGACAAGGCCTCCTTTATGCAGACTCCGCAGTGTTCACAGGACTG-GACACAGCCCTG-CCCTGCTGCCGTCTGCCGTGCC-TTTGCTTCCTTGGTTTCATTCCTCGGTCTC-TACCTTGAATATAATAAGAT-CTGTTTAT-ACATTTTCCTCTC-G-TGCATTATACCAAAGGA--AAAGAGAAG-ACAGT-AG-TTTAAAGCTCCCAACAT-TTTTCATGTTCTGAGCC-TTA-GGTCTCCC-ATACGATAGAGAATCGACAAATATCAGAGGACCTCAAACCTGGCCCGAGATGAAA---TAGCTTTGAGGCTTCCAGGGATCCCTCGGAAGGCTGCACCCA---GGACGGCCACACGTGAAAACATGATGGCTCTTTTCTTCTCTGTTCACTGT-GGTTTTATCAGACAGAGCTTTAAACTGGTTTATTCAAT--GACATG--GAGTGGTTCTCTCCTATGTCTCTG-CTTGTCCAGTGTGTGACAAGAG-T-------TGAGAAGTGGGGAGACACA--GG-GGGCACATTGAATGCAGGTG-GTCTCACCCGCCTCCCTCAGGATGCACGTCTTGC--CTGT-CTAGGCTTG-GCCT-CCTCTGCACTGTGTG--CTCCTAAATGAAGCGTGACCCTTCTTCCC-CCACCTAATTGGTGGTTCTCTGCCCCCATGAGCTCAGCAAGCTGCTTCCCTGA--CACACGCAGGTCCTAGCCTGGAGGAGA-CGGAGCAACAAGGCCGAGGG----GGGACGAACACTGGCCTG-GCTTT-CGGGTCCACCTTCGCCGCATG-CAGATGCTTCTCTATCCTTT-ATGAT-TG-AGACCCTGGAGC-AGGGGATCA--CCTAGTTTTGATGACCATAAAGTGGAGAAGGAGCAGG-GAGCAGTTAGGGCCATTGCTGCAAGCTCCTGGTGTCCCTGACA--G-TGAGAGAGGCAGGACACTCGCCTGA--GCTGGGCCTGAGGATG-CTGCTTTCTCCTCTGCATGCCTGGG-GTCCAACGAGGG--TCATGGGACCCAGGAACAT-CTCTGC-AACTC-T-ATCTGTAAACATCCAGGAGCTAATTGT------GACCTGGAAGTCATTTGGAACTCAGCACAGAGGCCTTCAGAAGTCCCTGCCTTCAGATAAGGGGAGGTGCTGACTCGCCC-ACTGGCTAGCACTGTT-AAAACAGAC--------TTTTTTctatagcgaacatcataacaaatgatgaaatactc-aataact----ccccct-aaaacggggagaaagggaaggg-----tttctgt-------ttttgttttcatctcttctagtcagcattgggctggg---aggttgcagccagtgc-gaagagatgagg-aaaagaaa----agtatacacattggaaagaaataagtaaaatgatcc-tcagttacaggtgaaatgagatggcaaatcctaagggatccacaaaaaatcaacttgaa-ccaataagtgaatt-taaaacatcacaggacaccaggtcaatatataaagataggttgtatttctata----------------------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33930475 1795 + 185818997 caacagagagcagcagggacttgctttt--gctgggccctcagcaaga-ccacacagggag------------taaa-caatgttgcctccaatttTCCCGTGAGGTG-AGAAATCTTCTTATC---CAGATGAGAAGGTGCAGGCCCAGGGCAGGTGTGGGTGGCCAGGCCGGGGATGGAG-CCCTCACGCGGCCTC--GAGATTAGCACCCAGGCGTCGGC-TCTCTCCACGACACGCAGAAACGGCTCCACGCCTGTGCTGGTGTTTTCATAGGAACCC---TTGTGTGTTTGTTTCCCTGCTCAGACTTAGGT-CAAATGGTCTA-TTAATTAC-AGGAGATTTAGTCACTCCTGACACCAGCGTGTGTGGTTCAAGCAGCCCAAGGGGA-AGAGACAAGGCCTCCTTTATGCAGACTCTGAAGTCTTCAGAGGACTG-GACACAGCCCTG-GCCTGCTGCTGTCTGCCATGCCTTTTGCTCCCTGGGTTTTATTCCTTGCTCTG-TACCTTGAATATAATAAGAT-CCGTTTGC-ACATTTTGCTCTT-A-TGCCTGACACCAAAGGA--AG--AGAAG-ATAGT-AG-TTTAAAGCTCCCAACAT-TTTTCATGTTCTGAGCC-TTA-GGTCTCCC-ACATGGTAGAGAATCAACAAATATCAGAGGACCCCAAACCTGGCCCGAGATGAAA---CAGCTTTGAGGCTTCCAGGGATCCCTCAGAAGGCTGCACCCA---GGCTGGCCACATGTGAAAACATGGTGGCTCTTTTCTTCTCTGCTCACTGT-GGTTTTAT----CAGAGCTCTAAAATGGTTTATTCCAT--GACATG--GAGGGGTTCTCTCCTATGTCTCTG-CTTGTCCAGTGTGTGACAAGAG-T-------TGAGAAGTGGGGAGACACA--GG-GGGCACACTGAATGCAGGTG-GTCTCACCCGCCTCACTCTGGATATACATCTTGC--CTGG-CTAGGCTTG-GCCT-CCTGTGAACTGTGTGCCCCTCTAAATGAAGCATGACCCTTGTTCCC-CCACCTAATTGGTGGTTCTCTGCCCCCATGAGCTCAGCCAGCTGCTTCCTTGA--CACGTGCAGGTGTCAGCCTGGAGGAGA-CGGAGCAACAAGGCCTAGTG----GGGATGAACACTG------GCTTT-CTGGTCCACCTTTGCCTCATG-CCAATGCTTCTCTATCCTTT-ATGAC-TG-AGATCCTGGAGC-AGGGAATCA--CTTAGTCTTAATGACCATAAAGTGGAGAAGGAGCAGG-GAGAGGTTGGGACCATTGCTGCAAGCTCTTGGTGTCCCTGACAGAG-TGAGAGAGGCGGAACACTCGCCTGG--GCTGGGCCTGAGGATG-CTGCTTGCTCCTCTGCCTGCCTGGG-GCCCAGCGGGGG--TCACGGGACCCAGGACTGT-CTCTGC-GACTC-T-AGTTGTAAACATCCAGGAGC-AGTTGT------GACCTGGAAGTCATTCGGCACTCAGCACAGAGGCCTCCAGAAGTCCCTGCCTTCAGCTAAGGACAGGTGCTTGCTCTCCC-AGTGGCTGGCACTGTT-AAAACAGAC--T----TTTTTTTctatagccaatgtcataacaaatgaggaaatactc-aataact----ccccct-aaaatggggagaaacggaaggg-----tttctgg-------atttgttttcatcttttccagtca-cattgggctggg---aggttccagtcagtgc-aaagagacgagg-aaaagaaa----agtacaaatattggaaagaaatcagtaaaattaccc-tcatttacaggtgaaatgagatggcaaatcctaagggatccacaaaaaatcagcttgaa-ccaataagtgaattttgcgacatcacaggacaccaagtcaatatacaaagatc-gttgtatttctata----------------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33546412 1797 + 192294377 CAACAGAGAGCAGCAGGGACTTGCTTTT--GCTGGGCCCTCAGCAAGA-CCACACAGGGAG------------TAAA-CAATGTTGCCTCCAATTTTCCCGTGAGGTG-AGAAATCTTCTTATC---CAGATGAGAAGGTGCAGGCCCAGGGCAGGTGTGGGTGGCCAGGCCGGGGATGGAG-CCCTCACGCGGCCTC--GAGATTAGCACCCAGGCGTCGGC-TCTCTCCACGACACGCAGAAACGGCTCCACGCCTGTGCTGGTGTTTTCATAGGAACCC---TTGTGTGTTTGTTTCCCTGCTCAGACTTAGGT-CAAATGGTCTA-TTAATTAC-AGGAGATTTAGTCACTCCTGACACCAGCGTGTGTGGTTCAAGCAGCCCAAGGGGA-AGAGACAAGGCCTCCTTTATGCAGACTCCGAAGTCTTCAGAGGACTG-GACACAGCCCTG-GCCTGCTGCTGTCTGCCGTGCCTTTTGCTCCCTGGGTTTTATTCCTTGCTCTG-TACCTTGAATATAATAAGAT-CCGTTTGC-ACATTTTGCTCTT-A-TGCCTGACACCAAAGGA--AG--AGAAG-ATAGT-AG-TTTAAAGCTCCCAACAT-TTTTCATGTTCTGAGCC-TTA-GGTCTCCC-ACATGGTAGAGAATCAACAAATATCAGAGGACCCCAAACCTGGCCCGAGATGAAA---CAGCTTTGAGGCTTCCAGGGATCCCTCAGAAGGCTGCACCCA---GGCTGGCCACATGTGAAAACATGGTGGCTCTTTTCTTCTCTGCTCACTGT-GGTTTTAT----CAGAGCTCTAAAATGGTTTATTCCAT--GACATG--GAGGGGTTCTCTCCTATGTCTCTG-CTTGTCCAGTGTGTGACAAGAG-T-------TGAGAAGTGGGGAGACACA--GG-GGGCACACTGAATGCAGGTG-GTCTCACCCGCCTCACTCTGGATATACATCTTGC--CTGG-CTAGGCTTG-GCCT-CCTGTGAACTGTGTGCCCCTCTAAATGAAGCATGACCCTTGTTCCC-CCACCTAATTGGTGGTTCTCTGCCCCCATGAGCTCAGCCAGCTGCTTCCTTGA--CACGTGCAGGTGTCAGCCTGGAGGAGA-CGGAGCAACAAGGCCTAGTG----GGGATGAACACTG------GCTTT-CTGGTCCACCTTTGCCTCATG-CCAATGCTTCTCTATCCTTT-ATGAC-TG-AGATCCTGGAGC-AGGGAATCA--CTTAGTCTTAATGACCATAAAGTGGAGAAGGAGCAGG-GAGAGGTTGGGACCATTGCTGCAAGCTCTTGGTGTCCCTGACAGAG-TGAGAGAGGCGGAACACTCGCCTGG--GCTGGGCCTGAGGATG-CTGCTTGCTCCTCTGCCTGCCTGGG-GCCCAGCGGGGG--TCACGGGACCCAGGACTGT-CTCTGC-GACTC-T-AGTTGTGAACATCCAGGAGC-AGTTGT------GACCTGGAAGTCATTCGGAACTCAGCACAGAGGCCTCCAGAAGTCCCTGCCTTCAGCTAAGGACAGGTGCTTGCTCTCCC-AGTGGCTGGCACTGTT-AAAACAGACTTT----TTTTTTTctatagccaatgtcataacaaatgaggaaatactc-aataact----ccccct-aaaatggggagaaacggaaggg-----tttctgg-------atttgttttcatcttttccagtca-cattgggctggg---aggttccagtcagtgc-aaagagacgagg-aaaagaaa----agtacaaatattggaaagaaatcagtaaaattaccc-tcatttacaggtgaaatgagatggcaaatcctaagggatccacaaaaaatcagcttgaa-ccaataagtgaattttgcgacatcacaggacaccaagtcaatatacaaagatc-gttgtatttctata----------------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4307725 1797 - 9440265 caacagagagcagcagggacttgctttt--gctgggccctcagcaaga-ccacacagggag------------taaa-caatgttgcctccaatttTCCCGTGAGGTG-AGAAATCTTCTTATC---CAGATGAGAAGGTGCAGGCCCAGGGCAGGTGTGGGTGGCCAGGCCGGGGATGGAG-CCCTCACGCGGCCTC--GAGATTAGCACCCAGGCGTCGGC-TCTCTCCACGACACGCAGAAACGGCTCCACGCCTGTGCTGGTGTTTTCATAGGAACCC---TTGTGTGTTTGTTTCCCTGCTCAGACTTAGGT-CAAATGGTCTA-TTAATTAC-AGGAGATTTAGTCACTCCTGACACCAGCGTGTGTGGTTCAAGCAGCCCAAGGGGA-AGAGACAAGGCCTCCTTTATGCAGACTCCGAAGTCTTCAGAGGACTG-GACACAGCCCTG-GCCTGCTGCTGTCTGCCGTGCCTTTTGCTCCCTGGGTTTTATTCCTTGCTCTG-TACCTTGAATATAATAAGAT-CCGTTTGC-ACATTTTGCTCTT-A-TGCCTGACACCAAAGGA--AG--AGAAG-ACAGT-AG-TTTAAAGCTCCCAACAT-TTTTCATGTTCTGAGCC-TTA-GGTCTCCC-ACATGGTAGAGAATCAACAAATATCAGAGGACCCCAAACCTGGCCCGAGATGAAA---CAGCTTTGAGGCTTCCAGGGATCCCTCAGAAGGCTGCACCCA---GGCTGGCCACATGTGAAAACATGGTGGCTCTTTTCTTCTCTGCTCACTGT-GGTTTTAT----CAGAGCTCTAAAATGGTTTATTCCAT--GACATG--GAGGGGTTCTCTCCTATGTCTCTG-CTTGTCCAGTGTGTGACAAGAG-T-------TGAGAAGTGGGGAGACACA--GG-GGGCACACTGAATGCAGGTG-GTCTCACCCGCCTCACTCTGGATATACATCTTGC--CTGG-CTAGGCTTG-GCCT-CCTGTGAACTGTGTGCCCCTCTAAATGAAGCATGACCCTTGTTCCC-CCACCTAATTGGTGGTTCTCTGCCCCCATGAGCTCAGCCAGCTGCTTCCTTGA--CACGTGCAGGTGTCAGCCTGGAGGAGA-CGGAGCAACAAGGCCTAGTG----GGGATGAACACTG------GCTTT-CTGGTCCACCTTTGCCTCATG-CCAATGCTTCTCTATCCTTT-ATGAC-TG-AGATCCTGGAGC-AGGGAATCA--CTTAGTCTTAATGACCATAAAGTGGAGAAGGAGCAGG-GAGAGGTTGGGACCATTGCTGCAAGCTCTTGGTGTCCCTGACAGAG-TGAGAGAGGCGGAACACTCGCCTGG--GCTGGGCCTGAGGATG-CTGCTTGCTCCTCTGCCTGCCTGGG-GCCCAGCGGGGG--TCACGGGACCCAGGACTGT-CTCTGC-GACTC-T-AGTTGTAAACATCCAGGAGC-AGTTGT------GACCTGGAAGTCATTCGGAACTCAGCACAGAGGCCTCCAGAAGTCCCTGCCTTCAGCTAAGGACAGGTGCTTGCTCTCCC-AGTGGCTGGCACTGTT-AAAACAGACTTT----TTTTTTTctatagccaatgtcataacaaatgaggaaatactc-aataact----ccccct-aaaatggggagaaacagaaggg-----tttctgg-------atttgttttcatcttttccagtca-cattgggctggg---aggttccagtcagtgc-aaagagacaagg-aaaagaaa----agtacaaatattggaaagaaatcagtaaaattaccc-tcatttacaggtgaaatgagatggcaaatcctaagggatccacaaaaaatcagcttgaa-ccaataagtgaattttgcgacatcacaggacaccaagtcaacatacaaagatc-gttgtatttctata----------------------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16897411 1795 - 21915920 CAACAGAGAGCGGCAGGGACTTGCTTTT--GCTGGGCCCTCAGCAAGA-CCACAC-GGGAG------------TAAA-CAATGTTGCCTCCAATTTTCCCGTGAGGTG-AGAAATCTTCTTATC---CAGATGAGAAGGTGCAGGCCCAGGGCAGGTGTGGGTGGCCAGGCCGGGGATGGAG-CCCTCACGCGGCCTC--GAGATCAGCACCCAGGCGTCGGC-TCTCTCCACGACACGCAGAAACGGCTCCACGCCTGTGCTGGTGTTTTCATAGGAACCC---TTGTGTGTTTGTTTCCCCGCTCAGACTTAGGT-CAAATGGTCTA-TTAATTAC-GGGAGATTTAGTCACTCCTGACACCAGCGTGTGTGGTTCAAGCAGCCCAAGGGGA-AGAGACAAGGCCTCCTTTATGCAGACTCCGCAGTCTTCAGAGGACTG-GACACAGCCCTG-GCCTGCTGCTGTCTGCCGTGTCTTTTGCTCCCTGGGTTTTATTCCTTGGTCTG-TACCTTGAATATAATAAGAT-CCGTTTGC-ACATTTTGCTCTTAA-TGCCTGACACCAAAGGA--AG--AGAAG-ATAGT-AG-TTTAAAGCTCCCAACAT-TTTTCATGTTCTGAGTC-TTA-GGTCTCCC-ACATGGTAGAGAATCAACAAATATCAGAGGACCCCAAACCTGGCCCGAGATGAAA---CAGCTTTGAGGCTTCCAGGGATCCCTCAGAAGGCTGCACCCA---GGCCGGCCACATGTGAAAACATGGTGGCTCTTTTCTTCTCTGCTCACTGT-GGTTTTAT----CAGAGCTCTAAAATGGTTTATTCCAT--GACATG--GAGGGGTTCTCTCCTATGTCTCTG-CTTGTCCAGTGTGTGACAAGAG-T-------TGAGAAGTGGGGAGACACA--GG-GGGCACACTGAATGCAGGTG-GTCTCACCCGCCTCACTCTGGATATACATCTTGC--CTGG-CTAGGCTTG-GCCT-CCTGTGAACTGTGTGCCCCTCTAAATGAAGCATGACCCTTGTTCCC-CCACCTAATTGGTGGTTCTCTGCCCCCATGAGCTCAGCCAGCTGCTTCCCTGA--CACATGCAGGTCCCAGCCTGGAGGAGA-CGGAGCAACAAGGCCTAGTG----GGGATGAACACTG------GCTTT-CTGGTCCACCTTTGCCTCATG-CCAATGCTTCTCTATCCTTT-ATGAC-TG-AGATCCTGGAGC-AGGGAATCA--CTTAGTCTTAATGACCATAAAGTGGAGAAGGAGCAGG-GAGAGGTTGGGACCACTGCTGCAAGCTCTTGGTGTCCCTGACAGAG-TGAGAGAGGCGGAACACTCGCCTGG--GCTGGGCCTGAGGACG-CTGCTTGCTCCTCTGCCTGCCTGGG-GCCCAGCGGGGG--TCACGGGACCCAGGACTGT-CTCTGC-GACTC-T-AGTTGTAAACATCCAGGAGC-AGTTGT------GACCTGGAAGTCATTCGGAACTCAGCACAGAGGCCTCCAGAAGTCCCTGCCTTCAGCTAAGGACAGGTGCTTGCTCTCCC-AGTGGCTGGCACTGTT-AAAACAGAC--T----TTTTTTTctatagccaatgtcataacaaatgaggaaatactc-aataact----ccccct-aaaatggggagaaacggaaggg-----tttctgg-------atttgttttcatcttttctagtca-cattgggctggg---aggttctagtcagtgc-aaagagacgagg-aaaagaaa----agtacaaatattggaaagaaatcagtaaaattaccc-tcatttacaggtgaaatgagatggcaaatcctaagggatccacaaaaaatcagcttgaa-ccaataagtgaattttgcgacatcacgggacaccaagtcaatatacaaagatc-gttgtatttctata----------------------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 37198 1793 - 21531802 CAATAGAGAGCGGCAGGGACTTGCTTTT--GCTGGGCCCTCTGCAAGA-CCACACAGGGAG------------TAAA-AAATGTTGCCTCCAACTTTCCCGTGAGGTG-AGAATTCTTCTTATC---CAGATGAGAAGGTGCAGGCCCAGGGCAGGTGTGGGTGGCCAGGCTGGGGATGGAG-CCCTCACACGGCCTC--GAGATCAGCACCCAGGCGTCGGC-TCTCTCCACGACACGCCGAAACGGCTCCACGCCTGTGCTGGTGTTTTCATAGGAACTC---TTGTGTGTTTGTTTCCCCGCTCAGACTTAGGT-CAAATGGTCTA-TTAATTAC-GGGAGATTTAGTCACTCCTGACACCAGCGTGTGTGGTTCAAGCAGCCCAAGGGGA-AGAGACAAGGCCTCCTTTATGCAGACTCCGCAGTCTTCAGAGGACTG-GACACAGCCCTG-GTCTGCTGCTGTCTGCCGTGCCTTTTGCTCCCTAGGTTTCATTCCTTGGTCTG-TACCTTGAATATAATAAGAT-CCATTTGC-ACATTTTGCTCTT-A-TGCCTGACACCAAAGGA--AG--AGAAG-ATAGTAAG-TTTAAAGCTCCCAACAT-TTTTCATGTTCTGAGCC-TTA-GGTCTCCC-ACATGGTAGAGAATCAACAAATATCAGAGGACCCCAGACCTGGCCCGAGATGAAA---CAGCTTTGAGGCTTCCAGGGATCCCTCAGAAGGCTGCACCCA---GGCCGGCCACATGTGAAAATATGGTGGC---TTTCTTCTCTGCTCACTGT-GGTTTTAT----CAGAGCTCTAAACTGGTTTATTCCAT--GACATG--GAGGGGTTCTCTCCTATGTCTCTG-CTTGTCCAGTGTGTGACAAGAG-T-------TGAGAAGTGGGGAGACACA--GG-GGGCACACTGAATGCAGGTG-GTCTCACCCACCTCACTCAGGATGTACGTCTTAC--CTGG-CTAGGCTTG-GCCT-CCTGTGCACTGTGTGCCCCTCTAAATGAAGCATGACCCTTGTTCCC-CCACCTAATTGGTGGTTCTCTGCCCCCATGAGCTCAGCCAGCTGCTTCCCTGA--CACATGCAGGTCCCAGGCTGGAGGAGA-CGGAGCAACAAGGCCGAGTG----GGGACGAACACTG------GCTTT-CTGGTGCACCTTTGCCTCATG-CAAATGCTTCTCTATCCTTT-ACGAT-TG-AGATCCTGGAGC-AGGGAATCA--CCTAGTCTTAATGACCATAAAGTGGAGAAGGAGCAGG-GAGAGGTTGGGACCATTGCTGCAAGCTCTTGGTGTCCCTGACAGAG-TGAGAGAGGTGGGACACTCCCCTGG--GCTGGGCCTGAGGACG-CTGCTTTCTCCTCTGCCTGCCTGGG-GCCCAGCAGGGG--TCATGGGACCCAGGACTGT-CTCTGC-AGCTC-T-AGTTGTAAACATCCAGGAGC-AGCTGT------GACCTAGAAGTCATTCGGAACTTAGCATAGAGGCCCCCAGAAGTCTCTGCCTTCAGATAAGGAGAGGTGCTTGCTCTCCC-AGTGGCTGGCTCTGTT-AAAACAGAC--T----ATTTTTTctatagccaacatcataacaaatgaggaaatactc-aataact----ccccct-aaaatgaggagaaatggaa-gg-----tttctgg-------atttgtttttgtctcttccagtcagcattgggcttgg---aggttccagtcagtgc-aaagagacgagg-aaaagaaa----agtacaaatattggaaagaaatcagtaaaattaccc-tcatttacaggtgaaataagatggtaaatcctaagggatccacaaaaaatcagcttgaa-ccaataagtgaattttgcgacatcttaggacaccaagtcaatatacaaagatc-attgtatttctata----------------------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 61283 1794 - 2515279 CAACAGAGAGCGGCAGGGACTTGCTTTT--GCTGGGCCCTCAGCAAGA-CCACACAGGGAG------------TAAA-CAATGTTGCCTCCAATTTTCCCGTGAGGTG-AGAAATCTTCTTATC---CAGATGAGAAGGTGCAGGCCCAGGGCAGGTGTGGGTGGCCAGGCTGGGGATGGAG-CCCTCACGTGGCCTC--GAGATCAGCATCCAGGCGTTGGC-TCTCTCCACGACAGGCAGAAACGGCTCCACGCCTGTGCTGGTGTTTTCATAGGAACCC---TTGTGTGTTTGTTTCCCCGCTCAGACTTAGGT-CAAATGGTCTA-TTAATTAC-GGGAGATTTAGTCACTCCTGACACCAGCGTGTGTGGTTCAAGCAGCCCAAGGGGA-AGTGACAAGGCCTCCTTTATGCAGACTCCGCAGTCTTCAGAGGACTG-GACACAGCCCTG-GCCTGCTGCTGTCTGCCGTGCCTTTTGCTCCCTGGGTTTTATTCCTTGGTCTG-TACCTTGAATATAATAAGAT-CCGTTTGC-ACGTTTTGCTCTT-A-TGCCTGACACCAAAGGA--AG--AGAAG-ATAGT-AG-TTTAAAGCTCCCAACAT-TTTTCATGTTCTGAGCC-TTA-GGTCTCCC-ACATGGTAGAGAATCAACAAATATCAGAGGACCCCAAACCTGGCCCGAGATGAAA---CAGCTTTGAGGCTTCCAGGGATCCCTCAGAAGGCTGCACCCA---GGCCGGCCACATGTGAAAACATGGTGGCTCTTTTCTTCTCTGCTCACTGT-GGTTTTAT----CAGAGCTCTAAAATGGTTTATTCCAT--GACACG--GAGGGGTTCTCTCCTATGTCTCTG-CTTGTCCAGTGTGTGACAAGAG-T-------TGAGAAGTGGGGAGACACA--GG-GGGCACACTGAATGCAGGTG-GTCTCACCCGCCTCACTCTGGATATACATCTTGC--CTGG-CTAGGCTTG-GCCT-CCTGTGAACTGTGTGCCCCTCTAAATGAAGCATGACCCTTGTTCCC-CCACCTAATTGGTGGTTCTCTGCCCCCATGAGCTCAGCCAGCTGCTTCCCTGA--CACATGCAGGTCCCAGCCTGGAGGAGA-CAGAGCAACAAGGCCTAGTG----GGGATGAACACTG------GCTTT-CTGGTCCACCTTTGCCTCATG-CCAATGCTTCTCTATCCTTT-ATGAC-TG-AGATCCTGGAGC-AGGGAATCA--CTTAGTCTTAATGACCATAAAGTGGAGAAGGAGCAGG-GAGAGGTTGGGACCATTGCTGCAAGCTCTTGGTGTCCCTGACAGAG-TGAGAGAGGCGGAACACTCGCCTGG--GCTGGGCCTGAGGACG-CTGCTTGCTCCTCTGCCTGCCTGGG-GCCCAGCGGGGG--TCAC--GACCCAGGACTGT-CTCTGC-GACTC-T-AGTTGTAAACATCCAGGAGC-AGTTGT------GACCTGGAAGTCATTCGGAACTCAGCACAGAGGCCTCCAGAAGTCCCTGCCTTCAGCTAAGGACAGGTGCTTGCTCTCCC-AGTGGCTGGCACTGTT-AAAACAGAT--T----TTTTTTTctatagccaatgtcataacaaatgaggaaatactc-aataact----ccccctaaaaatggggagaaacggaaggg-----tttctgg-------atttgttttcatcttttccagtca-cattgggctggg---aggttccagtcagtgc-aaagagacaagg-aaaagaaa----agtacaaatattggaaagaaatcagtaaaattaccc-tcatttacaggtgaaatgagatggcaaatcctaagggatccacaaaaaatcagcttgaa-ccaataagtgaattttgcgacatcacgggacaccaagtcaatatacaaagatc-gttgtatttctata----------------------- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 217594 1774 + 6586416 caacagagagcggcagggacttgctttt--gctggaccctctgcaaga-ccacacagggag------------taaa-cagtgttgcctccaacttTCCCGTGAGGTG-AGAATTCTTGTTATC---CAGATGAGAAGGTGCAGGCCCAGGGCAAGTGTGGGTGGCCAGGACGGGGATGGAG-CCCTCACGCGGCCTC--GAGATCAGCACCCGGGCGTCAGC-TCTCTCCATGATACGCCGCAACGGCTCCACGCCTGTGCTG-----------------------GTGTGTTAGTTTCCCCGCTCAGACTTAGGT-CAAATGGTCTA-TTAATTAT-GGGAGATATAGTCACTCCTGACGTCGGCGTGTGTGGTTCAAGCAGCCCGAGGGGA-AGAGACAAGACCTCCTTTATGCAGACTCCGCAGTCCTCAGAGGACTG-GACACAGCCCTG-GCCTGCTGCTGTCTGCCGTGCCTTTTGCTCTCTGGGTTTCACTCCTTGGTCTG-TACCTTGCATATAATAAGAT-CCATTTGC-ACATTTTGCTCTT-A-TGCCTGACACCAAAGGA--AG--AGAAG-GCAGT-AG-TTTAAAGCTCCCAACGT-TTTTCATGTTCTGAGCC-TTA-GGTCTCCC-ACATGGTAGAGAATCAACAAATATCAGAGGACCCCAGACCTGGCCCGAGATGAAA---CAGCTTTGAGGCTTCCAGGGATCCCTCAGAAGGCTGCACCCA---GGCTGGCCACATGTGAAAACATGGTGGCTCCTTTCTTCTCTGCTCACTGT-GGTTTTAT----CAGAGCTCTAAGCTGGTTTATTCCAT--GACATG--GAGGGGTTCTCTCCGATGTCTCCG-CTTGTCCAGTGTGTGACAAGAG-T-------CGAGAAGTGGGGAGACACA--GG-GGGCACACTGAATGCAGGTG-GTCTCACCTGCCTCACTCAGGATGTACGTCTTGC--CTGG-CTAGGCTTG-GCCT-CCTATGCACTGTGTGCCCCTCCAAATGAAGCATGACCCTTGCTCCC-CCACCTAATTGGTGGTTCTCTGCCCCCACGAGCTCAGCCAGCTGCTTCCCTGA--CACATGCGGGTCCCAGCCTGGAGGAGA-CGGAGCAACAAGGCCGAGTG----GGGATGAACACTG------GCTTT-CTGGTCCACCTTTGCCTCATG-CAAATGCTTCTCTATCCTTT-ATGAC-TG-AGATCCTGGAGC-AGGGAATCA--CCTAGTCTTAATGACCATAAAGTGGAGAAGGAGCAGG-GAGGGGCTGGGACCATTGCTGCAAGCTCTTGGTGTCCCTGACGGAG-TGAGAGAGGCGGGACACGAGCCTGG--GTTGGGCCTGAGGATG-CTGCTTTCTCCTCTGCCTGCCTGGG-GCCCAGCGGGGG--TCACAGGACCCGGGACTGT-CTCTGC-GACTC-T-AGCTGTAAACATCCAGGAGC-AGCTGT------GACGTGGAAGTCATCCAGAACTCAGCACAGAGGCCTCCAGAAGTCCCTGCCTTCAGACAAGGACAGGTGCTTGCTCTCCC-AGTGGCTGGCACTGTT-AAAACAGAC-------TTTTTTTctatagccaacatcataacgaatgaggaaatactc-aataact----ccccct-aaaatggggagaaacagaaagg-----tttctgg-------atttgttttcatctcttccagtca-cattgggctggg---aggttccagtcagtgc-agagagacgagg-aaaagaaa----ggtacaaatattggaaagaaatcagtaaaattaccc-tcatttacaggtgaagtgagatggcaaatcctaagggatccacagaaaatcagcttgaa-ccaataagtgaattttgcgacatcacaggacaccaagtcaatacacaaagatc-gttgtgtttctata----------------------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146583011 1785 - 204313951 CAACAGAGAGCAGAAGGAATTTGCTTTT--GCTGGTCCCTCATCAAAA-CCACATAGGGAgccttgcaggcaataaa-caatgttacctacaactatcccctgaggtg-ggaatttttcctatc---cagataagaaggtgcaggctcagaggaggtgtgggtggccaagccagggATGGAG-CCCTCATGTGGCCTCAAGGGATCAGCACCCCAGAATCAGC-TCTCTCTGCAACATGCTGAAATGG--------CTGTGTCGCTGTGTTTATAGCGACGCCTTTTTTGTGTTTGTTTCCTAGCTCAGACTTAGGT-CAAATGGTCTA-TTAATTAG-GGCAGGTTTAGTTACTCCAGACATCAGCTTGTGTGGCTCAAGCAGCCCAAGG--------------CCTCCTTTGCAC--AGTCTGAGG---TCAGAGGACTG-GACCCAGCCCTGGCCCTGCTGCTGTCTGCCGTGCCTCTTGCTCCTTGGGTTTCATTCCTTGGTCTG-TATCTTGAATATAATACAGC-CCTTTTGT-ACATTTTGCTCTC-A-TGCAGTATACCAAAGGAAGAG--AGGAG-ACAGT-AG-TTTAAAGCCCCCAAC-T-ATTTTATTTTCTGAGCC-TTA-AGTTTCTC-ATATAGTAGAGAATCAACAAATATCAGAGGATCCCATACCTGGCCGGAGATGAAA---TGGCTTTGAGTCTTCCAGGCATCTGTCAGAAGGCTGCACCCA---GGCCGGCCACACATGGAAACATGATGATTCTCTTCTTCTCTGTTCACTGTGGGTTTTGTCAGACAGAGCTCTAAACTGGTTTATTTAAT--GACGTG--GAATGGTTCTCTTCTATGTCTCTA-CTTACCCAGAGTGTGACAAGAG-T-------TGACAAGTGGGGAG--ACA--GG-AGGCACACTGAATGCAGGTG-GTCTCTCCTGCCTCACTCAGGATGCATGTCTTGC--CCGG-CTGG------GCCC-CCTGTGCACTGTGTGCTCCTCTAAGTGAAGCATGACCCTTGTTTCC-CCACCTAATTGGTGGTTCTCTGCCCCCACAAACCCAGCCATATGGTTCCCTGACACACATGCAGGTCTTAGCCTGGAGGAGA-CGGAGCAGCAAGGCCAAGTG----GGCACAAACACTTGCCTG-GACTT-CTGGTCCACCTT-GCCTGATG-CAAATGCTTCTCTATCCTTC-ACAGT-TG-AGATCCTGGAGC-A-GGGATCA--CCTAGTCTTAATGGCTGTAAAGTGGAGAAGGAGCAGG-GAGAGTTCAGGACTGTAG-------CTCTTGCTGTCCCTGGCAGAG-TGAGAGAGGCAGGACACTGGCCTGG--ACCAGACCTGAGGATG-CTGCTTTCTCCTCTGCCTGCCTGGG-TTCCAACAGGGG--TCATGGGACCCAGGAAGGC-CTCTGC-AACTC-T-AACTGAAAGTATCCATGAGCTAACTGT------GACCTGGAAGTCATTCGGAACTCAGCACAGAGGCCTTCAGAAGTCCCTGCCTTCAGATGAGGACAGGTGCTTACTCTCCCAAGTGGCTAGCACTGTT-AAAACAGAC--T----TTTTTTTctacagccaacatcataacaaatgatgacacactg-aataactgccccccact-aaaacggaaaaaaagggaaggc-----tttctgg-------ttttgctttcatctcttctggtcaacatagggctggg---aggttccagccagtgcaaaagagatgagg-aaaagaaattaaagtataaatattggaaataaataaggaaaactgtcc-taatttacaggtgaaataagatggcaaatcctaaggaatccacaagaaatcaacttgaa-ctagtaagtgaattttgcaacatcacaggttaccaagtcaatatataaagatcagt----------------------------------- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 420103 1789 - 2125214 CAACAAAGAGCAGAAGGAATTTGCTTTT--GCTGGACCCTCATTAAAA-CCACACAGGGAgctctgcaggcaataaa-caatgttgcctacaactatcccttgaggtg-ggaatttttcctatc---cagataagaaagtgcaggcccagaggaggtGTGGGAGGCCAAGCTGGGGATGGAG-CCCTCACATGGCCTCAAGGGATCAGCACCCCAGAATCAGC-TCTCTCCGCAACATGCGGAAATGGCTCCATGCCTGTGTCACTGTGTTTATAGCTAC-CCCTTTTTGTGTTTGTTTCCTAGCTCAGACTTAGGT-CAAATGGTCTA-TTAATTAG-GGCAGGTTTAGTTACTCCAGACATCATCTTGTGTGGCTCAAGCAGCCCAAGG--------------CCTCCTTTACACAGAGTCTGCAG---TCAGAGGACTG-GACCCAGCCCCAGCCCTGCTGCTGTCTGCCGTGCCTCTTGCTCCCTGGGTTTCATTCCTTGGTCTG-TATCTTGACTATAATACAGC-CCTTTTGT-ACATTTTGCTCTC-A-TGCATTATACCAAAGGAAGAG--AGGAG-ACAGT-AG-TTTAAAGCCCCCAAC-T-TTTTTATTTTCTGAGCC-TAA-AGTTTCTC-ATATAGTAGAGAATCAACAAATATCAGAGGATCCCATACCTGGCCAGAGATGAAA---CGGCTTTGAGTCTTCCAGGGATCCATCAGAAGGCTGCACCCA---GGCCGGCCACACGTGGAAACATGATGATTCTCTTCTTCTCTGTTCACTGTGGGTTTTGT----CAGAGCTCTAAACTGGTTTATTCAAT--GACATG--GAGTGGTTCTCTTCTATGTCTCTG-GTTATCCAGTGTGTGACAAGAG-T-------TGACAAGTGGTGAG--ACA--GG-AGGCACACTGAATGCAGGTG-GCCTCTCCTGCCTCACTCAGGATGCACGTCTTGC--CCAG-CTGG------GCCC-CCTGTGCACTATGTGCTCCTCTAAATGAAGCATGACCCTTGTTTCC-CCACCTAATTGGTGGTTCTCTGCCCCCACAAGCCCAGCCATATGGTTCCCTGACACACATGCAGGTCCTAGCCTGGAGGAGA-CAGAGCAGCAAGGCCGAGTG----GGGACGAACGCTGGCCTG-GACTT-CTGGTCCACCTT-GCCTGATG-CAAATGTTTCTCTATCCTTT-ATGAC-TG-AGATCCTGGAGC-A-GGGATCA--CCTAGCCTTAATGGCTGTAAAGTGGAGAAGGAGCAGG-GAGAGGTTGGGACCGTAG-------CTCTTGCTCTCCCTGGCAGAG-TGAGAGAGGCGGGACACTCGCCTGG--ACCAGGCCTGAGGATG-CTGCTTTCTCCTCTGCCTGCCTGGG-GCCCAATGGGGG--TCATGGGCCCCAGAAAGGC-CTCTGC-AACTC-T-AGCTGAAAGTATCCATGAGCTAACTGT------GGCCAGAAAGTCATTCGGAACTCAGCACAGAGGCCTTCAGAAGTCCCTGCCTTCCGATGAGGACAGGTGCTTACTCTCCCAAGTGGTTAGCACTGTT-AAAACAGAC--TT--CTTTTTTTctacagccaacatcataacaaatgatgacatactg-aataact---cccccct-aaaatggggaaaaagggagggc-----tttctgt-------ttttgctttcatctcttctagtcaacattgggctggg---aggttccagccagtgcaaaagagatgagg-aaaagaaataaaagtataaatattagaaataaataaggaaaactaacc-tcatttacaggtgaaatgagatggcaaatcctaaggaatccacaaaaaatcaacttgaa-ctagtaagtgaattttgcaacatcacaggataccaagtcaatatataaagatcagt----------------------------------- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 43088 1798 + 376347 CAACAGAGAGCAGAAAGAATTTGCTTTT--GCTGGTCCCTCATCAAAA-TCACACAGGGAGCTTTGCAGGCAATAAA-CAATGTTGCCTACAACTGTCCCATGAGGTG-GGAATCCTTCCTATC---CAGATAAGAAGGTGCAGGCCCAGAGGAGGTGTGGGTGGCCAAGCTGGGGATGGAG-CCCTCACGTGACCTCAAGGGATCAGCACCTCGGAATCAGC-TCTCTCCACAACATGCTGAAAGGGCTCCATGCCTGTGTCGCTGTGTTTATAGCGATCCTTTTTTTGTGTTTGTTTCCTAGCTCAGACTTAGGT-CAAATGGTCGA-TTAATTAG-GGCAGGTTCAGTTACTCCAGACGTCGGCTTGTGTGGCTCAAGCAGCCCAAGG--------------CCTTCTTTACACAGAGTCTGCAG---TCAGAGGACTG-GACCTGGTCCCGGCCCTGCTGCTGTCTGCCGCGCCTCTTGCTCCCTGGGTTTCATTCCTTGGTCTG-TATCTTGAATATAATACAGC-CCTTTTGT-ACATTTTGCTCTC-A-TGCATCACACCAAAGGA--AG--AGGAG-ACAGT-AG-TTTAAAG-CCCCAAC-T-GTTTTATTTTCTGAGCC-TTA-AGTTTCTC-ATCTAGTAGAGAATCAGCAAAGATCAGAGGATCCCACACCTGGCCAGAGACGAAA---CGGCTTTGAGTCTTCCAGGGATCCGTCAGAAGGCTGCACCCA---GGCCGGCCAC------------------TCTCTTCTTCTCTGTTCACTGTGGGTTTTCT----CAGAGCTCTGAACTGGTTTATTCGAT--GACATG--GAGTGGTTCTCTTCTGTGTCTCTG-CTTATCCGGCGTGTGACAAGAG-T-------TGACAAGTGGGGAG--ACG--GG-AGGCACGCTGAATGCAGG-G-GTCTCTCCCGCCTCACTCAGGATGCACGTCTTGC--CCGG-CTGG------GCCC-CCTGTGCACCACGTGCTCCTCTAAATGAAGCATGACCCTTGTTTCC-CCACCTAATTGGTGGTTCTCTGCCCCCACAAGCCCAGCCATATGGTTCCCCGACGCACATGCAGGTCCTAGCCTGGAGGAGA-TGGAGCAGCAAGGCCAGGTG----GGCACGAACGCTGGCCTG-GACTT-CTGGTACACCCT-GCCTGATG-CCAATGCTTCTCTATCTTCT-ACGAT-TG-AGATCCTGGAGC-AGGGGATCA--CCTAGTGTTAATGGCTGTAAAGTGGAGAAGGAGCAGG-GAGAGGTTAGGACCATAGCT-----CTCTTGCTGCCCCTGGCAGAG-TGAGAGCGGCGGGACACTCGCCTGG--ACCGGACCTGAGGATG-CTGC-TTCTCCTCTGCCTGCCTGGG-GCCCAGTGGGGG--TCATGGGACCCAGGAAGGC-CTCTGC-AGCTG-T-AGCTGAAAGTATCCGTGAGCTGACTGT------GACCCGGAAGTCATTCGGAACTCAGCACGGAGGCCTTCAGACGTCCCTGCCTTCAGATGAGGACAGGTGCTTAATCTCCCAAGTGGCTAGCACTGTA-AACACAGAC-------GTTTTTTctacagccaacatcataacaaatgatgacatcctg-aataact---cccccct-aaaacggggaaagaaggaaggc-----tttctgt-------ttttgctttcatctcttctagtcaacattgggctggg---aggttccagccagtgcaaaagagatgagg-aaaagaaataaaagtataaatattggaaataaataaggaaaactgtcc-tcatctacaggtgtgatgagatggcaaatcctaaggagtccacaaaaaatcaacttgaa-cttgtaagtgaattttgcgacagcacaggatgccaagtcagtatataaggatcagttgtgtttatact----actgatgactaattcaaaa i aotNan1.NW_018514293v1 I 18 I 450 s otoGar3.GL873611 2162958 1753 - 8137123 CCGTGAAGAGCAGGGGGGATTTGCTTT---GTTGACCCTGAAGCAAAAGCTGTGCAAGGAGCGTCACATGTGAGAAA-CAATGTTGTCTACAAAGATCCCATGAGGTG-GGAAGTCCTCTCCTCAGGCTGATGAGAAGGCCCAGGTCCAG---AGGGGTGAG---------CGGGTCTGGGG-TCTGCATGTGGCT------------------------GGT-TCTTTCTGTAGCACACAGAGG-GTCTCCATGTCTTT-CCAGGGTTTACATGTGTACCC-CAGTTTGTGTTTGATTCCTAGCTCGGACTT-GAC-CAAATGGACTG-CTGTCAAG-GATACGGTTAGTCATTACAGACTCCAGC-TGTGTCACTCAAACAGCACAGGGAGACAGACCCGTGGTCTGTCTGGGACAGCTCGGGCTGTGTTTGGAGGCCCA-GAAGCCACCCCA-CTGTGCT----TATGCAG--------------------------CTTGGCCTA-AACCCTGAGTACCATATTTG-CCCTTTGT-CCA-TTCGTGCTC-A-TGCATCCTAACATAGAA-GAG--TGAGT-GGGGT-CG-TTTATAGCTTCCAAAATGATTTCATTTTCTGAGCC-TTT-GGTCTTCCAATCTGGCAGAAAATCAACAA-----------------ACTTTGCCTGAGATGAAA---TGGCTCTGAGGCTTCCAGAAACGCCTCAGAAAGCTGCCCGCACTGGGCCAGCCATACATTGAAATGTGATGAC-----TCTTCTCTGTTTGTTGCAGGTTTTATCAAGTAGAGCTCTAAATTGGTTGATTCAAA--GCAATG--GAGTAGTTCTGTCTTACTTCCCC--CGTGTCCAGTGTGTGATAAGAG-TGTGGAGGTGAGAAGTGAGGGGCTGGGGTGG-GGGAACGTGGTATGCTTGTC-TGTCTGCCTGCTCCATTCAGGA-------CCTGCTGCTGG-CTGGGCTCA-ATCTCCCTATGTGCAGCGTGGGTTGGCAAATGAAGCATGGCCCTGGATCCAGCCACCTCCTCAGCGGTCCTCTGCCTCA--GAGCCCTGCCAGCTGCTTCCGCAG--CACATGCAGGTTCCAGACAGGAGGAGA-CACAGCAATGAGGCCGTGGGGTCAGGGCGGCATCCTG------GCCTC-CTGATCCCTCTTTGTCTTGTG-GACATGCTACCTTGTC-----ATGAC-TG-AGATACTGAAGT-T-GGGGTCA--CCTAGTATCAATGGTCACAAAGTGGGAAGGAAGGGGGTGGGGGATCAAAACCATTGCCACAAGTTCTTGGCAACCT--GCAGAGCTGACAGAAGCAGGACACTTGCTTAGACACTGGCCCTGAGGATG-CTGCTTCCTCCTCCAGCTGAAAGTG-GCTGGACAGAGA--CCACGGGGCCCAGGAATGT-CCCTGC-ATCTC-TCAGCTGTAGGCATCCATGAGCTAATTGTTCTTGAGGCCTAGAAGTCATTGAGGACCTACTATGATGGTCTTCAGAAGTGTC-ACCTTCAGATAAGAACAGGTGTTTGTTCCCTCAAGCAGCTAGCACTATT--AAACAGAC--TTCCCCCCCCCcccgcagccaatattataatgaatggtgaaagacta-agtaact---ccccact-aaggcagaaagaaagggaagga-----tttttgt-------ttttgtttccatctcttctgtccaacaatggacaggatgctggttctagccagtgc-aaacagataaag-aaaagaaatagaagagcacattttgtagaggaagaagcaaaactgtcc-atatttgtaggtgatg-gaaatagacaatccttaagaatctacaagaaaacaactagaa-ttaacaagtggctt-tgtaacatcctgggataccatgtcagtacata---atcagttatatttctata----------------------- i otoGar3.GL873611 C 0 C 0 a score=3669803.000000 s hg38.chr3_KI270784v1_alt 93521 714 + 184404 catcacag--gacaccaggtcaacatataaagataggctgtatttctatatactgctgatgactaatttaaaatgaagtc--aaaaatactat-ctataata-gt-----aaaatcaaatacttaggga-taaatttcacaatatatgtg-aaaacctctacaccaaaaattatctga-------gagatatatct-ctaaa---tataccatgtct------------------------------aattcttcacaaattgatctaatcattcaatgaaatctcaattggagtccctgtggac------ttttcctctaaattaacaggatgatttagaagttcatagagaa-gtgaaggtctaagggca-----gccacagccatctggaaaggaac-ggca-ccatcagaagagttgtcaa--------------------------------atcttgcac----------------cagtaaggccataaag-aaatagctcactggcatagagcagaga--ttacagaaataggctgac-aggcaccatcccatgattttcaacaagcaggccaaaaccacagggggaaacatggtactgaaataactggatatcaggccaggcgtagtggggctcatgcctgtagtcccaggactttgggatgcc-aaggt-gggaggattgcttgggcccagaagtttgagaccagcgtgggcaacgtcataagactctgtgtctctac-----acagagatgtaggccaggcac-ggaggtg-cacactgaggcaggaggatcccttgagcccaggggtttcaggctgcagtaagctgtg-atc s panTro5.chr10 5884 715 + 135926727 catcacagccgacacca-gtc-acatataaagataggtt-ta-ttctat-tactgctgatgactaaataaaatggaagtgtaaaaaatactatcctataataggt-----aaaatcaa--acttagggattaaatttcacaatatatgtg-aaaaactctacaccaaaaattatctga-------gagatatatctactaaa---tataccatgtct------------------------------aattcttcacaaattgatctaatcattcaatgaaatctcagt--gagtccc--tggac------tttt-ctctaaattaacaggatga-ttagaagttcatagagaa-gt-aaggtctaaggataaagacaCCACAG-CATCT-GAAAGGAACTAGCATCCATCAGAAGAG-TGTAAA----------------------------------CTTGCATCACCAAAGTAAAATCACAGTAAGGCCATAAAGCAAATAGCTCACT-GCATAGAGCAGAGAGGTCACA-AAATAGTCTGACAAGGCACCAT-CCATGA-TTTCAACAAGCAAACCAAAACCACAGGGGGAAACAT-GTACTGAAATAACT--ATATCAGGCCAG-----CTTGggctcatg-ctgtgctcc--agacttt-ggatgccaaaggtggggagggttgctt-ggcccagaag-ttgagaccagtgtgggcaacgtcataagactctgtgtctctac-----acagagatgtaggccaggcacgggaggtgccacactgaggca-caggatcccttgagccca-gggttttaggctgcggtaagctgtgcatc i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 27826 710 - 432965 catcacag--gacaccaggtcaacatataaagataggttgtatttctatatactgctgatgactaatttaaaatgaagt---aaaaatactat-ctataata-gt-----aaaatcaaatacttaggga-taaatttcacaatatatgtg-aaaacctctacaccaaaaattatctga-------gagatatatct-ctaaa---tataccatgtct------------------------------aattcttcacaaattgatctaatcattcaat-aaatctcatt-ggagtccctgtggac------ttttcctctaaattaacaggatgatttagaagttcatagagaa-gt-gaagtctaagggca-----gccacagccatctggaaaggaac-ggca-ccatcagaagagttgtcaa--------------------------------atcttgcac----------------cagtaaggccataaag-aaatagctcactggcatagagcagaga--gtccagaaataggctgac-aggcaccatcccatgattttcaacaagcaaaccaaaaccacagggggaaacatggtactgaaataactggatatcaggccaggcgtagtggggctcatgcctgtagtcccaggactttgggatgcc-aaggt-gggaggattgcttgggcccagaagtttgagaccagcgtgggcaacgtcataagactctgtgtctctac-----acagagatgtaggccaggcac-ggaggtg-cacactgaggcaggaggatcccttgagcccaggggttttaggctgcagtaagctgtg-atc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 91546 694 + 85365473 --------------------------------------------------cactactaatgactaatttaaaatgaagtg--aaaaatactat-ctgtaata-gt-----aaaatcaaatacttaggga-taaatttcacaatatatgtg-aaaacctctacaccaaaaattatctga-------gagatgtatct-ctaaa---tataccatgtct------------------------------aattcttcacaaattgatctaatcattcaatgaaatctcaattggagtccccgtggac------ttttcctctaaattaacaggatgatttagaagttcatagagac-gtgaaggtctaagggca-----gccatagccatctggagaggaac-ggca-ccatcagaagagttgtcaagattgatgacggagctgcagggttcgtggcagatcttgcag----------------cagtaaggccataaag-aaataggtcactggaatagagcagagt--gtccagaaataggctgac-aggcaccatcccatgattttcaacaag-gggccaaaaccacaggggaaaa-atggtactgaaataactgggtatcaggccaggcgtagtggggctcgtgcctgtagtcccaggactttgggatgcc-aaggt-gggaggattgcttgggcccagaagtttgagacc-gcgtgggcaacgtcataagactctgtgtctctac-----acagagacataggccaggcat-ggaggtg-cacactgaggcaggaggatccc-tgagcccaggagttcgaggctgcagtaagccatg-atc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33932270 690 + 185818997 --------------------------------------------------tactactgatgactaatttaaaatgatgtt--aaaaatactat-ctataata-gt-----aaaatcaaatacttaagga-taaatttcactatatatgtgcaaaacctctacaccaaaaattatctga-------gagatacatct-ctaaa---tataccatgtct------------------------------acttcttcacaagttgatctaatcattccatgaaatctcagttggagtccctgtggac------ttttcctgtaaattaacaagatgatttagaagttcatagagaa-gtgaaggtctaagggca-----gccacagccatctgggaaggact-agca-ccatccgaagagttggcaagattggtgacggagctgctgtgttcatggcagatcttgcag----------------cagtaaggccataaag-aaataggtcactggaatagagcagaga--gtccagaagtaggctgac-aggcactatcctatggttttcaacacgtgggccaaagccgcagggggaaaaatggatccgaaataactggatatcaggccaggcacagtggggctcatgcctgtagtcccagaagttc----------aagt-gggaggattgcttgggcccaaaagtttgggaccagtgtgggcaacgtcataagactctgtgtctttac-----acagagacataggccgggcat-ggaggtg-cacacggaggcaggaggatcccttgagcccgggagtttgaggctgcaataagccgtg-atc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33548209 690 + 192294377 --------------------------------------------------tactactgatgactaatttaaaatgatgtt--aaaaatactat-ctataata-gt-----aaaatcaaatacttaagga-taaatttcactatatatgtgcaaaacctctacaccaaaaattaTCTGA-------GAGATACATCT-CTAAA---TATACCatgtct------------------------------acttcttcacaagttgatctaatcattccatgaaatctcaattggagtccctgtggac------ttttcctgtaaattaacaagatgatttagaagttcatagagaa-gtgaaggtctaagggca-----gccacagccatctgggaaggacc-agca-ccatccgaagagttggcaagattggtgacggagctgctgtgttcatggcagatcttgcag----------------cagtaaggccataaag-aaataggtcactggaatagagcagaga--gtccagaagtaggctgat-gggcactatcctatggttttcaacacgtgggccaaagccgcagggggaaaaatggatccgaaataactggatatcaggccaggcacagtggggctcatgcctgtagtcccagcagttc----------aagt-gggaggattgcttgggcccaaaagtttgggaccagtgtgggcaacgtcataagactctgtgtctttac-----acagagacataggccgggcat-ggaggtg-cacacggaggcaggaggatcccttgagcccgggagtttgaggctgcaataagccgtg-atc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4309522 690 - 9440265 --------------------------------------------------tactactgatgactaatttaaaatgatgtt--aaaaatactat-ctataata-gt-----aaaatcaaatacttaagga-taaatttcactatatatgtgcaaaacctctacaccaaaaattaTCTGA-------GAGATACATCT-CTAAA---TATACCatgtct------------------------------acttcttcacaagttgatctaatcattccatgaaatctcaattggagtccctgtggac------ttttcctgtaaattaacaagatgatttagaagttcatagagaa-gtgaaggtctaagggca-----gccacagccatctgggaaggacc-agca-ccatccgaagagttggcaagattggtgacggagctgctgtgttcatggcagatcttgcag----------------cagtaaggccataaag-aaataggtcactggaatagagcagaga--gtccagaagtaggctgac-aggcactatcctatggttttcaacacgtgggccaaagccgcagggggaaaaatggatccgaaataactggatatcaggccaggcacagtggggctcatgcctgtagtcccagcagttc----------aagt-gggaggattgcttgggcccaaaagtttgggaccagtgtgggcaacgtcataagactctgtgtctttac-----acagggacataggccgggcat-ggaggtg-cacacggaggcaggaggatcccttgagcccgggagtttgaggctgcaataagccgtg-atc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16899206 693 - 21915920 --------------------------------------------------tactactgatgactaatttaaaatgatgtt--aaaaatactat-ctataata-gt-----aaaatcaaatacttaagga-taaatttcactatatatgtgcaaaacctctacaccaaaaattatctga-------gagatacatct-ctaaattttataccatgtct------------------------------acttcttcacaagttgatctaatcattccatgaaatctcaattggagtccctgtggac------tcttcctgtaaattaacaagatgatttagaagttcatagagaa-gtgaaggtctaagggca-----gccacagccatctgggaaggacc-agca-ccatccgaagagttggcaagattggtgacggagctgctgtgttcatggcagatcttgcag----------------cagtaaggccataaag-aaataggtcactggaatagagcagaga--gtccagaagtaggctgac-aggcactatcctatggttttcaacacgtgggccaaagccgcagggggaaaaatggatctgaaataactggatatcaggccaggcacagtagggctcatgcctgtagtcccagcagttc----------aagt-gggaggattgcttgggcccaaaagtttgggaccagtgtgggcaacgtcataagactctatgtctttac-----acagagacataggctgggcat-ggaggtg-cacacggaggcaagaggatcccttgagcccgggagtttgaggctacaataagccgtg-atc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 38991 699 - 21531802 --------------------------------------------------tactactgatgactaatttaaaatgaagtt--aaaaatactat-ctataata-gt-----aaaatcaaatacttgggga-taaatttcacaatatatgtgcaaaacctctacaccaaaaattaTCTGA-------GGGATACATCT-CTAAA---TATACCatgtct------------------------------acttcttcacaagttgatctaatcattccacgaactctcagttggagtccctgtggac------ttttcctctaaattaacaagatgatttagaagttcatagagaa-gtgaaggtctaagggca-----gccacagccatctgggaaggacc-agca-ccatccgaagagttggcaaaattggtcacggagctgccgtgttcatggcagatctcgcag----------------cagtaaggccataaag-aaataggtcactggaatagggcagaga--gtccagaagtaggctgac-aggcaccatcccatggttttcaacatgcgggccaaagctgcagggggaaaaatggagccgaaataactgggtatcaggccaggcacagtggggctcatgcctgtggtcccagcagttcgggatgcc-aaggt-gggaggattgcttgggcccagaagtttgggaccagcgtgggcaacgtcataagactctgtgtctttac-----acagagacataggccaggcat-ggaggtg-cacacggagacagggggatcccttgagcccaggagtttgaggctgcagtaagctgtg-atc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 63077 690 - 2515279 --------------------------------------------------tactactgatgactaatttaaaatgatgtt--aaaaatactat-ctataata-gt-----aaaatcaaatacttaagga-taaatttcactatatatgtgcaaaacctctacaccaaaaattatctga-------gagatacatct-ctaaa---tataccatgtct------------------------------acttcttcacaagttgatctaatcattccatgaaatctcaattggagtccctgtggac------ttttcctgtaaattaacaagatgatttagaagttcatagagaa-gtgaaggtctaagggca-----gccacagccatctgggaaggacc-agca-ccatccgaagaattggcaagattggtgacggagctgctgtgttcatggcagatcttgcag----------------cagtaaggccataaag-aaataggtcactggaatagagcagaga--gtccagaagtaggctgac-aggcactatcctatggttttcaacacgtgggccaaagccgcagggggaaaaatggatctgaaataactggatatcaggccaggcacagtggggctcatgcctgtagtcgcagcagttc----------aagt-gggaggattgcttgggcccaaaagtttgggaccagtgtgggcaacgtcataagactctatgtctttac-----acagagacataggccgggcat-ggagatg-cacatggaggcaggaggatcccttgagcccgggagtttgaggctgcaataagccgtg-atc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 219368 698 + 6586416 --------------------------------------------------tactactgatgactcatttaaaatgaagtt--aaaaatactat-ctataata-gt-----aaaatcaaatacttaggga-taaatttcacaatacatgtgcaaaacctctacaccaaaaaTCCTCTGA-------GAGATACCTCT-CTAAA---CATACCatgtct------------------------------acttcttcacaagttgatctaatcgttccatgaaatctcagttggagtccctgtggac------ttttcctctaaattaacaaggtggtttagaagttcatagagaa-gtgaaggtctaagggca-----gccacagccgtctgggcaggacc-agca-ccatccgaagagctggtaagggtggtgacggagctgccgtgttcatggcagatctcgcag----------------cagtaaggccatgaag-aaataggtcaccggaatagagcagaga--gtccggaagtaggctgac-aggcaccgtcccatggttttcaacacacgggccaaagccgca-ggggaaagatggagccgaaataactgggtatcaggccaggcacagtggggctcacgcctgtggtcccagcagttcgggatgcc-aaggt-gggaggattgcttgggcccagaagtttgggaccagcgtgggcaacgtcataagactctgtgtctccac-----acagagacataggccgggcgt-ggaggtg-cacacggaggcaggaggatcccttgagcctgggagtctgaggctgcagtaagccgtg-atc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146584796 696 - 204313951 ------------------------------------------tgtatttatactactga---ctaatttaaaataaaatt--ttaaatgttat-ctataata-gt-----gaaatcaaa----taggaa-taaatttaacaatatatgtgcaaaacctctacaacaaaaattatctga-------gagatatattt-ctaaa---gata-tatttct------------------------------aattcttctcaaattgagctaatccttcaatgaaatctcaattggagtccccgtggac------tttttctataaattaacgtgatgatttagaagttcatagagaaggtgaaggtctaagagta-----gtcacagcaatctggaaagaaat-ggca-ttgtcagaagagttgttaagactgatgacagagctccagtgttcatggcagatcttgtaa----------------cattatagccatagat-aaataggtcactggaatagagcagaga--gtccagaaat---------aagcaccatcccattatttttgacaagtggcccaaaactgcagggggaaaagtggtactaaaataactggatatcaggccaggcatggtggggctcatacctgtagtcccagcaatttagaatgcc-aacgt-gggaagattgctt-ggcccagaagtttgagaccagtgtggaaaacatcaaaagactctgtgtctctacaaaaaataaaaaaataggccaggcat-ggaggtg-cacaatgaggcaggaggatcccttgagcccaggagtttgagacttcggtaagttgtg-att i calJac3.chr2 C 0 I 13 s cebCap1.NW_016107703v1 421892 696 - 2125214 ------------------------------------------tgtatttatactactgatgcctaatttaaaataaaaat--taaaatgctat-ctataata-gt-----gaaatcaaa----taggaa-taaatttaacaaaatatttgcaaaacctctacaacaaaaattatctga-------gagatatattt-ctaaa---tataccgtgtct------------------------------aattcttcacaaattgagctaatcattcaatgaaatctcaattggagtccccgtggac------tttttctgtaaattaacatgatgatgtagaagttcatagagaaggtgaaggtctaagagta-----gccacagcaatctggaaagaaat-ggta-tcgtcagaagagttgtcaaggccgatgacggagctgcagtgttcatggcggatcttgtag----------------cagtatggcc----gt-aaataggtcactggaatagagcagaga--gtccagaaat---------aggcaccatcccatgatttttgacaagcagcccaaaagcgcagaggggaaaatggtactaaaataactagatagcaggccaagcatggtggggctcatacttatagtcccagcactttggaatgcc-aacct-gggaatcttgctt-agcccagaagtttgagaccagtgtgggcaacatcataagactctgtgtctctacaaaaaataaaaaaataggccaggcat-ggaggtg-cacactgaggcaggaggatcccttgaacccaggagtttgaggctatggtaagccgtg-att i cebCap1.NW_016107703v1 C 0 I 13 s otoGar3.GL873611 2164711 488 - 8137123 -------------------------------------------------------ctgctgaataattttaaaggaaatt--agaaata-----ccacaata-gtgtcaaaaaatcaaatatttaggga-taaattggacaatatctgcacaacacttctatactaaacattacaaaacattgctgagataaagag-agaaa---tatatcatatcttgattggaagactcatattattgggatatcaattcttcccgaattgatctaggtagtcaatgaaatctcaattgaaattccagaaggctactttttcccctataacttgaccagatagtttag-cgttcacatggcaggtaaaggtgtgagaata-----gccaaagacaccttgaaagaaag-agca---gtcaagggacttgccag--------------------------------agctttctg----------------t-------------------------------acagagctgag---gtgtata---cggctgtc-gg---------------tgtcagcaaa------acacccataaaggaagagactg--ctgggata--------------------------------------------------------------------gagagga------gggtctagaga-------------tgg----------------ctgagtgaccgc-----ccagtgattttgacaaggggc-caa-----cacagt------------------------------------------------------- i otoGar3.GL873611 C 0 C 0 e aotNan1.NW_018514293v1 44886 450 + 376347 I a score=2090647.000000 s hg38.chr3_KI270784v1_alt 94235 344 + 184404 gcagcttgggcgatagagtg-agatcctgtctctaaaatataaaatatataaataaataaaacaaaactggatatccacatgaaaagaaa----aaagaatcttgactcctccttctcataccTTCGAAACTGAGAggttagg-caagggtttcatagagaaga--------cacaagccataaactagaagattgataaactagagtataAC--TTACG-Agggaaacgagagtgacttcatgctg-gagaaacc-tggcca-gcacac-tctgccaggtagccgaggtcaaca-tcag-cagtgagccgggccgaggcagg-acccctgatgtggtggcatgagaagcgcctcacct-ctgctctt-c s panTro5.chr10 6599 341 + 135926727 gcagcttggcgagtagagtgaagatcctgtctctaaa--attaaatatat-aataaataaaacaaaaCT-GATATCCACATGAAAAG--A----AAAGAATCTTGACTC--TCTTCTCATACCTTCGAAACTGAGAGGTTAGGCCCAAGGTTTATTAGAGAAGA--------CACAAGCCATAAACTAGAAGATTGATAAA-TAGAGTATAACTTTTACGCAGGGAAATGAGA-TTACTTCATGCTGAGCAAAACCTTGGCCACGCACAC-TCTG-caggtag-cgaggtcaacattcagccagcgagccaggccgaggcagg-acccctgatgt-gtgg-atgagaagcgcctcacctactgctctt-c i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 28536 341 - 432965 gcagcttgggcgatagagtg-agatcctgtctctaaaatataaaatatataaataaataaaacaaaactggat-tccacatgaaaagaaa----aaagaatcttgactcctccttctcataccTTCGAAACTGAGAGGTTAGG-CAAGGGTTTCATAGAGAAGA--------CACAAGCCA-AAACTAGAAGATTGATAAACTagagtataac--ttaca-agggaaacgagagtgacttcatgctg-gagaaacc-tggcca-gcacac-tctgccaggtagccgaggtcgaca-tcag-cagtgagccgggccgaggcagg-acccctgatgtggtgg-atgagaagcgcctcacct-ctgctctt-c i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 92240 344 + 85365473 gcagcttgcgtgatagagtg-agatcctgtctctaaaatataaaatatacaaataaataaaacaaaactggatatctacatgaaaagaaa----aaagaatcttgactcctccttctcataccTTCGAAACTGAGAGGTTAGG-CAAGGGTTTCATAGAGAAGA--------CACAAGCCATAAAGTAGAAGATTGATAAACTGgagtacagc--ttacg-agggaaacgagagtgacttcatgctg-gagaaacc-tggcca-gcacgc-tctgccaggtagccgaggttggca-tcag-cagtgagccgggccgaggcggg-ccccccgacatggtgggatgagaagcgcctcacct-ctgctctt-c i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33932960 323 + 185818997 gcagcttgggtgacagagtg-agatcctgtctctaaaatataaaatatataaataaaaaaa-----gctggatatccacatggacagaaa----aaagaatcttgacTCCCCCTTCTCATACCTTCGAAACTGAGAGGTTAGG-CAAGGGTCTCATAGAGAAGA--------CACAAGCCATAAACTAGAAGATTGATAGACTGgagtataac--gtatg-agggcaacgagagtgacttcacgctg-gagaaagc-tggcca---------------ggtagccgaggtcaaca-tcag-cagtgagccgggccgaggcgg---cccctgacgtggtgggatgggaagcgcctcact--ctgctctt-c i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33548899 323 + 192294377 gcagcttgggtgacagagtg-agatcctgtctctaaaatataaaatatataaataaaaaaa-----gctggatatccacatggacagaaa----aaagaatcttgactcccccttctcataccTTCGAAACTGAGAGGTTAGG-CAAGGGTCTCATAGAGAAGA--------CACAAGCCATAAACTAGAAGATTGATAGATTGGAGTATAAC--GTATG-Agggcaacgagagtgacttcacgctg-gagaaagc-tggcca---------------ggtagccgaggtcaaca-tcag-cagtgagccgggccgaggcgg---cccctgacgtggtgggatgggaagcgcctcact--ctgctctt-c i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4310212 323 - 9440265 gcagcttgggtgacagagtg-agatcctgtctctaaaatataaaatatataaataaaaaaa-----gctggatatccacatggacagaaa----aaagaatcttgactcccccttctcataccTTCGAAACTGAGAGGTTAGG-CAAGGGTTTCATAGAGAAGA--------CACAAGCCATAAACTAGAAGATTGATAGACTGGAGTATAAC--GTATG-Agggcaacgagagtgacttcacgctg-gagaaagc-tggcca---------------ggtagccgaggtcaaca-tcag-cagtgagccgggccgaggcgg---cccctgacgtggtgggatgggaagcgcctcact--ctgctctt-c i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16899899 323 - 21915920 gcagcttgggtgacagagtg-agatgctgtctctaaaatataaaatatataaataaaaaaa-----gctggatatccacatggacagaaa----aaagaatcttgacTCCCCCTTCTCATACCTTCGAAACTGAGAGGTTAGG-CAAGGGTTTCATAGAGAAGA--------CACAAGCCATAAACTAGAAGATTGATAGACTGGAGTATAAC--GTATG-Agggcaacgagagtgacttcacgctg-gagaaagc-tggcca---------------ggtagccgaggtcaaca-tcag-cagtgagccgggccgagacgg---cccctgacatggtgggatgggaagcgtcttgct--ctgctctt-c i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 39690 322 - 21531802 acagcttgggcaatagagtg-agatcctgtctctaaaatataaaatatataaataaaaaaa-----cctggatatccacatggacag-aa----aaagaatcttgactcccccttctcataccTTCGAAACTGAGAGGTTAGG-CAAGGGTTTTATAGAGAAGA--------CACAAGCCATAAACTAGAAGATTGATAAATTAGAGTGTAAC--GTATG-Agggcaacgagagtgacttcaagctg-gagaaacc-tggcct---------------ggtagccgaggtcaaca-tcgg-cagtgagccgggccgaggtgg---cccctgacgtggtgggatgggaagcgcctctct--cggctctt-c i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 63767 322 - 2515279 gcagcttgggtgacagagtg-agatgctgtctctaaaatataaaatatataaataaaaaag------ctggatatccacatggacagaaa----aaagaatcttgactcccccttctcataccTTCGAAACTGAGAGGTTAGG-CAAGGGTTTCATAGAGAAGA--------CACAAGCCATAAACTAGAAGATTGATAGACTGgagtataac--gtatg-agggcaacgagagtgacttcacgctg-gagaaagc-tggcca---------------ggtagccgaggtcaaca-tcag-cagtgagccgggccgaggcgg---cccctgacatggtgggatgggaagcgtcttgct--ctgctctt-c i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 220066 324 + 6586416 gcagcttgggtgatagagtg-agatcctgtctctaaaatataaaatatataaataaaaaga----ccctggatatccacatggacagaaa----aaagaatcttgactcccccttctcataccTTCGAAACTGAGAGTTTAGG-CCAGGGTTTCATAGAGAAGA--------CACAAGCCATAAACTAGAAGACTGATAAACTGCAGTATAAC--GTATG-AGGGCAACGAGAGTGACTTCACGCTG-GAGAAACC-CGGCCA---------------GGTCGCCGAGGTCAACA-TCGG-CAGTGAGCCGGGCCGAGGCGG---CCCCTGACCTGGTGGGATGGGAAGCGCCTCACC--CTGCTCTT-C i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146585505 346 - 204313951 gcagcctgggcgacagagt---gatcctgtctttaaaatataagacatatggataaataaaacaaaactggatatccacatgaaaagaaaatttaaaaaatcttgacacctccttctcaTACCTTTGAACCTGAGAGATTAGG-CGAAGGTTTCATAGAGACGA--------CACAATCCATAAACTAGAAGATTGATAAACCAGAGCAGAAC--GTACG-AGGCGaacaacggtgacttcacgctg-gagaaacc-tggtac-gcccac-tctgccaggtagccaagctcagca-tcag-cagtgagccaggccaaagccagcacccctgatgtggtgggacgagaagtgcctcacct-ctcttctt-- i calJac3.chr2 I 13 C 0 s cebCap1.NW_016107703v1 422601 345 - 2125214 gcagcctgggcaacagagtg-agatcatgtctctaaaatataaaacatatggataaataaaacaaaactggatatccacatgaaaagaaaattaaaagaatcttgactcctccttctcataccTTTGAACCTGAGAGATTAGG-CAAAGGTTTCACAGAGACGA--------CACAAGCCGTAAACTAGAAGATTGATAAACTGGAGTAGAAC--GTATG-AGGCGAACGACGgtgacttcacgctg-gagaaacc-tggtaa-gcccac-tctgccagatagctgagctcagcg-tcag-cagtgagttaggctgaagccggcgtccctgatgtggtgggatgagaagtgcctcacct-c---tctt-- i cebCap1.NW_016107703v1 I 13 C 0 s aotNan1.NW_018514293v1 45336 346 + 376347 gcagcctgggccacagagtg-ggatcctgtctctaaaatataaaacagatggataaataaaacaaaaCTGGATATCCACACGGAAAGAAAATTAAAAGAATCTTGACTCCTCCTTCTCATACCTTTGAACCTGAGAGATGAGG-CGAAGGTTTCATAGAGAAGA--------CACAAGCCATAAACTAGAAGATTGATAAACCGGAGTAGAAC--GTATG-AGGTGA---ACGgtgacttcacgctg-gagaaccc-tggtga-gcgcac-tctgccaggtagccgagctcagcg-tcgg-cagtgagccgggctgaagccggcgccccccatgtggtgggatgagaagtacctcacct-ctcttcttc- i aotNan1.NW_018514293v1 I 450 I 15 s otoGar3.GL873611 2165199 289 - 8137123 gcagcatgggtgatggtgct-aga----------------------------------aag-----acctttcatccacatggac---------agagaaccctggtccctacttcTCCCAGCTTCCCAGCTAAGAGGTTAGG-CAAAGATTTCACAGCAAAGACTCAAAAGCAAAAACTGTAAAACAGAAGATGGATAAACTGGAGTGTAAC--GTGTG-ATGAGaacaagagtgactttgcagag-gagagagc-tgacaa-gcccacgtcggccgtgtagccatggtca-ca-tcag-cagtgag-----------------tctctg-caggacatgaccagaggcatccagcc--cttgtggt-- i otoGar3.GL873611 C 0 C 0 a score=80243.000000 s hg38.chr3_KI270784v1_alt 94579 13 + 184404 ctccaaggagccc s panTro5.chr10 6940 13 + 135926727 ctccagagagccc i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 28877 13 - 432965 ctccaaggagccc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 92584 13 + 85365473 ctccaaggagccc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33933283 13 + 185818997 ctccatgaagccc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33549222 13 + 192294377 ctccatgaagccc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4310535 13 - 9440265 ctccaagaagccc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16900222 13 - 21915920 ctccatgaagccc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 40012 13 - 21531802 ctctatgaagccc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 64089 13 - 2515279 ctccatgaagccc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 220390 13 + 6586416 CTCCATGAAGCCC i colAng1.NW_012117710v1 C 0 I 151 s calJac3.chr2 146585851 13 - 204313951 ctccatgaggccc i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 422946 13 - 2125214 ctccatgaggctc i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2165488 13 - 8137123 cttctataagctt i otoGar3.GL873611 C 0 C 0 e aotNan1.NW_018514293v1 45682 15 + 376347 I a score=21942.000000 s hg38.chr3_KI270784v1_alt 94592 4 + 184404 acag s panTro5.chr10 6953 4 + 135926727 acag i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 28890 4 - 432965 acag i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 92597 4 + 85365473 acag i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33933296 4 + 185818997 acag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33549235 4 + 192294377 acag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4310548 4 - 9440265 acag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16900235 4 - 21915920 acag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 40025 4 - 21531802 acag i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 64102 4 - 2515279 acag i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 220554 4 + 6586416 acag i colAng1.NW_012117710v1 I 151 C 0 s calJac3.chr2 146585864 3 - 204313951 aca- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 422959 3 - 2125214 aca- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2165501 4 - 8137123 acag i otoGar3.GL873611 C 0 C 0 e aotNan1.NW_018514293v1 45682 15 + 376347 I a score=1230877.000000 s hg38.chr3_KI270784v1_alt 94596 179 + 184404 ccggaatctg-atcatgaaaaaaagacttcaca-cgaaccccggcagacagacact-cccccagatgcctgagcccagctt-ctcagaactttcaagatcacagaaaacaaggaaggtctgagaaactgtcacggcccagaggaccctagggagatgtgacaagcaaatgtcacacgggatcc s panTro5.chr10 6957 174 + 135926727 ccgg-atctgcatcatgaaaaaaagacttcacagcgaatcccggcagacagacact-cccctaaatgcctgacgccagcttcctcagaactttcaagatcacagaaaacaaggaa-gtctgagaa--cgtcacggcccagaggacccta-ggagacgtgacaag-aaat-tca-acgggatcc i panTro5.chr10 C 0 I 12 s gorGor5.CYUI01015914v1 28894 178 - 432965 ccggaatctg-atcatgaaaaaaagacttcaca-caaatcccggcagacagacact-cccccaaat-cctgagcccagctt-ctcataactttcaagatcacagaaaacaaggaaggtctgagaaagtgtcatggcccagaggaccctagggagacatgacaagcaaatgtcacaagggatcc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 92601 171 + 85365473 ccggaatctg-atcatgaagaaaagacttcata-cgaatcccaacagacagacactccccccaaacgcctgagcccagatt-ctcagaactttcaagatcacagaaaacaaggaaggtctgggaaactgtcacgg---------ctctagggagacgtgatgagcaaatgtcacacgggatcc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33933300 179 + 185818997 ccagaatctg-gatatgaaaaaccaccttcata-caaatcccaacagacagacact-cccccaaatacctgagcccaactt-ctcagaactttcaagatcatagaaaacagggaaggtctgagaaactgtcacagccaagagaggcctagggagatgtgatgagcaaatgtcacacgggatcc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33549239 179 + 192294377 ccagaatctg-gatatgaaaaaccaccttcata-caaatcccaacagacagacact-cccccaaatacctgagcccaactt-ctcagaactttcaagatcatagaaaacagggaaggtctgagaaactgtcacagccaagagaggcctagggagatgtgacgagcaaatgtcacacgggatcc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4310552 179 - 9440265 ccagaatctg-gatatgaaaaaccaccttcata-caaatcccaacagacagactct-cccccaaatacctgagcccaactt-ctcagaactttcaagatcatagaaaacaggaaaggtctgagaaactgtcacagccaagagaggcctagggagatgtgacgagcaaatgtcacacgggatcc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16900239 179 - 21915920 ccagaatctg-gatatgaaaaaccaccttcata-caaatcccaacagacagacact-cccccaaatacctgagcccaactt-ctcagaactttcaagatcatagaaaacagggaaggtctgagaaactgtcagagccaagagaggcctagggagacgtgacgaacaaatgtcacacgggatcc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 40029 179 - 21531802 tcagaatctg-gacatgaaaaacagccttcata-cgaatcccaacagacagacact-cccccaaatacctgagcccaactt-ctcagaactttcaagattgtagaaaacagggaaggtctgagaaactgtcacagccaagagaggcctagggagacgtgacgagcaaatgtcacacgggatcc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 64106 179 - 2515279 ccagaatctg-gatatgaaaaaccaccttcata-caaatcccaacagacagacact-cccccaaatacctgagcccaactt-ctcagaactttcaagatcatagaaaacagggaaggtctgagaaactgtcagagccaagagaggcctagggagacgtgacgagcaaatgtcacacgggatcc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 220558 179 + 6586416 ccggaatctg-gacatgaaaaacagccttcaca-cgaatcccaacagacagatact-cccccaaatacctgagcccagctt-ctcagaactttcaagatcgtagaaaacagggaaggtctgagaaactgtcacagccaagagaggccttgggagacgtgacgagcacttgtcatgcgggatcc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146585867 170 - 204313951 ccagaatctg-atcattagaaaaagactttgca-ggaatcccaacagacagacact-cccccaaatacctgagcccaactt-ctcagaactttcaagatcatagaaaacagtgaaggtctgagaaactgtcacagccaggaggagcctagggagatgtgatgaccaaatgtcac--------- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 422962 170 - 2125214 ccggaatctg-atcacaagaaaaagacttcata-ggaatcccaacagacagacact-cccctgaatgcctgagcccacctt-ctcagaactttcaagatcatagaaaacagggaaggtctgagaaactgtcacagccaggaggagcctagggagatgtgacgaccaaatgtcat--------- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 45697 169 + 376347 ccggaatctg--ccacaagaacatgacttcgta-ggaatcccaacagacagacact-cccccgaatgcctgagcccaactt-ctcagaactttcaagatcatagaaaacagggaaggtctgagaaactgtcacagccaggaggagcctagggagatgtgacgaccagatgtcac--------- i aotNan1.NW_018514293v1 I 15 C 0 s otoGar3.GL873611 2165505 176 - 8137123 ccccagtctc-atcatgacaaa--gacatcaca-caaaccccaacagg-ggacatt-ctcccaaacagctaagcataactt-ttcaacactatcaagatcacagaaaataaggagagtctgagaaactgtcacaaccaagaggagcctgaagcaacatggtgactaagtgtcctgcggagtct i otoGar3.GL873611 C 0 C 0 a score=60363.000000 s hg38.chr3_KI270784v1_alt 94775 21 + 184404 tggatgggatcctggatggga---- s gorGor5.CYUI01015914v1 29072 15 - 432965 tggatgggatcccgg---------- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 92772 13 + 85365473 tggatgggatcct------------ i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33933479 13 + 185818997 tggacaggatcct------------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33549418 13 + 192294377 tggacaggatcct------------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4310731 13 - 9440265 tggacaggatcct------------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16900418 13 - 21915920 tggacaggatcct------------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 40208 13 - 21531802 tggacgggatcct------------ i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 64285 13 - 2515279 tggacaggatcct------------ i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 220737 13 + 6586416 tggacaggatcct------------ i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146586037 10 - 204313951 ---atgggatcct------------ i calJac3.chr2 C 0 I 8 s cebCap1.NW_016107703v1 423132 10 - 2125214 ---gtgggatcct------------ i cebCap1.NW_016107703v1 C 0 I 8 s aotNan1.NW_018514293v1 45866 10 + 376347 ---gtgggatcct------------ i aotNan1.NW_018514293v1 C 0 I 8 s otoGar3.GL873611 2165681 17 - 8137123 tggttgggatcct--------ggga i otoGar3.GL873611 C 0 C 0 e panTro5.chr10 7131 12 + 135926727 I a score=2850283.000000 s hg38.chr3_KI270784v1_alt 94796 441 + 184404 tcccggcccacaaaacggccacccga--gaac-------aaaccaaatgaactgtgggc-tttagtcaatgattatgtagcaacgtttgtttgctaattctgacaaatgtaccattataatgtaaggcattaataataagcaaa-ctgtg--tgaagtatatggg-aacccggcactatctttataacaattctgtaaactcgaaatggctctaaaa-taa-aaaaacttca-ttt-taaaaaaCCAGCCACAGGGGAAGGAGGGAGATTGATAAATTGGACT------------------------------------tcaagaaaatg-gaagtc---------attggg-tgaaaatacacacaacagg-ga-cacctgatgaaagacctccatgaagaatgtg-t--------------aagcaactctgg-agacccagcaa-tcaacagactactgcccaattctaaaaaacgggcaa-agacttgagcaaacactttggaag-atacacaaatagctgat s panTro5.chr10 7143 435 + 135926727 tccggccccacaaaacggccacc--a--gaac--------aaccaaatgaactgtgggcttttagtcaatgattatgtagcaacgtttcttcgctaattcggacaaatttaccattataat-taaggcatt-ataataagaaaacctgtg--tgaagtatatgggcaacctggcactatcttta-aac-attctgtaaactcaaaat-gctctcaaa-ata-aaaaacttca--tt-taaaaaaCCAGCCACA-GGGAAGGA-GGAGA-TGATAAATTGGACC------------------------------------TAAAGAAAAT--GAAGTC---------ATTGGGCTGAAAATACACACAACAGGCGACCACCTGATGAAAGACCTCCATGAAGAAATTGTT--------------AAGCAACTCTGGAAAACCCAGCAACTCAACAGA-TA-TGCCCAATGCTAAAAAAATGGCAA-AGAC-TGGCCAAACACTTTGGAagcatacacaaatagctgat i panTro5.chr10 I 12 C 0 s gorGor5.CYUI01015914v1 29087 436 - 432965 ----gccccacaaaacggccacccga--gaac-------aaaccaaatgaactgtgggc-tttagtcaatgattatgtagcaacgtttgttcgctaattctgacaaatgtaccattataatgtaaggcattaataataaggaaa-ctgtg--tgaagtatatggg-aacccggcactatctttataacaattctgtaaact-gaaatggctctaaaataaa-aaaaacttca-ttt-taaaaaaCCAGCCACAGGGGAAGGAGGGAGATTGATAAATTGGACT------------------------------------TCAAgaaaatg-gaagtc---------attggg-tgaaaatacacacaacagg-ga-cacctgatgaaagacctccatgaagaatgtg-t--------------aagcaactctgg-agacccagcaa-tcaacagactactgcccaattctaaaaaacgggcaa-agacttgagcaaacactttggaag-ata-acaaatagctgat i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 92785 442 + 85365473 ----ggcccagaaaacggccacctga--gaacacggaggaaaccaaatgaactgtgggc-tttagtcaatgattatgtagcaacgtttgttcactaattctgacaaatgtactgttctaatgtaaggcatcaataataaggaaa-ccgtg--tgaagtatatggg-aacccggcactatctttataacaattctgtaaactcaaaatggctctaaaa--ta-aaaaacttca--tt-ttaaaaaCCAGCCACAGGGGAAGGAGGGAGATTGATAAATTGGACT------------------------------------tcaagaaaatg-gaagtc---------attggg-tgaaaatgcacacaacagg-ga-cacctgatgaaagacctgcatgaagaatgta-c--------------aagcaactctgg-aaacccagcag-tcaacagactactgcccaattctaaaacacaggcaa-agacttgagcaaacactttggaag-atacacaaatagctgat i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33933492 443 + 185818997 ----ggcccggaaaacggccacctgag-gaacacggaggaaaccaaatgaactgtgggc-ttgagttaatgattatgtagcaacgtttgttcactaattctggcaaatgtactgtactgatgtaaggcattaataataaggaaa-ccgta--tgaagtatatggg-aacccggcactctctttataacaattctgtgaactcgaaatggctctaaaa---t-aaaaacttca-ttt-taaaaaaCCAGCCACAGGGGAAGGAGAGAGATTGATAAACTGGACT------------------------------------tcaagaaaatgagaagtc---------gttggg-tgaaaatgcacacagcagg-ta-cacctgatgaaagacttgcatgaagaatcta-c--------------cagcagctctgg-aaacccaacaa-caaacaga-ttctacctgattctaaaaaacggacaacagccttgggcaaacacttcaaaag-atacacaaaca-ctgac i rheMac8.chr3 C 0 I 79 s macFas5.chr3 33549431 443 + 192294377 ----ggcccggaaaacggccacctgag-gaacacggaggaaaccaaatgaactgtgggc-ttgagttaatgattatgtagcaacgtttgttcactaattctggcaaatgtactgtactgatgtaaggcattaataataaggaaa-ccgta--tgaagtatatggg-aacccggcactctctttataacaattctgtgaactcgaaatggctctaaaa---t-aaaaacttca-ttt-taaaaaaCCAGCCACAGGGGAAGGAGAGAGATTGATAAACTGGACT------------------------------------tcaagaaaatgagaagtc---------gttggg-tgaaaatgcacacagcagg-ta-cacctgatgaaagacttgcatgaagaatcta-c--------------cagcagctctgg-aaacccaacaa-caaacaga-ttctacctgattctaaaaaacggacaacagccttgggcaaacacttcaaaag-atacacaaaca-ctgac i macFas5.chr3 C 0 I 79 s macNem1.NW_012019910v1 4310744 443 - 9440265 ----ggcccggaaaacggccacctgag-gaacacggaggaaaccaaatgaactgtgggc-ttgagttaatgattatgtagcaacgtttgttcactaattctggcaaatgtactgtactgatgtaaggcattaataataaggaaa-ccgta--tgaagtatatggg-aacccggcactctctttataacaattctgtgaactcgaaatggctctaaaa---t-aaaaacttca-ttt-taaaaaaCCAGCCACAGGGGAAGGAGAGAGATTGATAAACTGGACT------------------------------------tcaagaaaatgagaagtc---------gttggg-tgaaaatgcacacagcagg-ta-cacctgatgaaagacttgcatgaagaatcta-c--------------cagcagctctgg-aaacccaacaa-caaacaga-ttctacctgattctaaaaaatggacaacagccttgggcaaacacttcaaaag-atacacaaaca-ctgat i macNem1.NW_012019910v1 C 0 I 119 s cerAty1.NW_012002954v1 16900431 443 - 21915920 ----ggcccagaaaacggccacctgag-gaacacggaggaaaccaaatgaactgtgggc-ttgagttaatgattatgtagcaacgtttgttcactaattctggcaaatgtactgtactgatgtaaggcattaataataaggaaa-ccgta--tgaagtatatggg-aacccggcactctctttataacaattctgtgaactcgaaatgactctaaaa---t-aaaaacttca-ttt-taaaaaaCCAGCCACAGGGGAAGGAGAGAGATTGATAAACTGGACT------------------------------------tcaagaaaatgagaagtc---------gttggg-tgaaaatgcacacagcagg-ta-cacctgatgaaagacttgcatgaagaatcta-c--------------cagcagctctgg-aaacccaacaa-caaacaga-ttctacctgattctaaaaaacggacaacagccttgggcaaacacttcaaaag-atacacaaaca-ctgac i cerAty1.NW_012002954v1 C 0 I 79 s chlSab2.chr28 40221 443 - 21531802 ----ggcccggaaaacggccacccgag-gaacacagaggaaaccaaatgaactgtgggc-ttgagttaatgattatgtagcaacgtttgttcactaattctggcaaatgtaccgtactgatgtaaggcactaataataaggaaa-ccgta--tgaagtatatggg-aactcggcactctctttataacaattctgtgaactcgaaatggctctaaaa---t-aaaaacttca-ttt-taaaaaaCCAGTCACAGGGGAAGGAGGGAGATTGATAAACTGGACT------------------------------------tcaagaaaatgagaagtc---------gttggg-tgaaaatgcacacagcagg-ta-cacctgatgaaagacttgcatgaagaatgta-c--------------cagcagctctgg-aaacccaccaa-caaacaga-ttctacctgattctaaaaaatggacaacagccttgggcaaacacttcggaag-atacacaaaca-ctgac i chlSab2.chr28 C 0 I 39 s manLeu1.NW_012101810v1 64298 443 - 2515279 ----ggcccagaaaacggccacctgag-gaacacggaggaaaccaaatgaactgtgggc-ttgagttaatgattatgtagcaacgtttgttcactaattctggcaaatgtactgtactgatgtaaggcattaataataaggaaa-ccgta--tgaagtatatggg-aacccggcactctctttataacaattctgtgaactcgaaatggctctaaaa---t-aaaaacttca-ttt-taaaaaaCCAGCCACAGGGGAAGGAGAGAGATTGATAAACTGGACT------------------------------------tcaagaaaatgagaagtc---------gttggg-tgaaaatgcacacagcagg-ta-cacctgatgaaagacttgcatgaagaatcta-c--------------cagcagctctgg-aaacccaacaa-caaacaga-ttctacccgattctaaaaaacggacaacagccttgggcaaacacttcaaaag-atacacaaaca-ctgac i manLeu1.NW_012101810v1 C 0 I 79 s colAng1.NW_012117710v1 220750 444 + 6586416 ----ggcccagaaaacggccacccgag-gaacatggaggaaaccaaacgaactgtgggc-ttgcgttaatgattatgtagcaacgtttgttcactaattctggcaaatgtactgaactgatgtaaggcattaataataaggaaa-ccgtg--tgaagtatatggg-aacccggcactctctttataacaattctgtgaactcaaaatggctgtaaaa---taaaaaacttca-ttt-tacaaaaCCAGCCACAGGAGAAGGAGGGAGATTGATAAACTGGACT------------------------------------TCAAGAAAATGAGAAGTC---------GTtggg-tgaaaatgcacacagcagg-ta-cacctgatgaaagacttgcatgaagaatgta-c--------------cagcagctctgg-aaacccaacaa-caaacaga-ttctacctgattctaaaaaacggaaaacagccttgggt-aacacttcggaag-atacacaaacagctgac i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146586055 418 - 204313951 ttctggcacagaaa-----------------------ggaaatcaaataaactgtgggc-tttagctaatgattatataacaatatgtgttcattaattctgacaaatataccatgctaatgtgaggtattagtaatcaggaaa-ttgtg--tgaagtatatggg-a----------------ataacaattctgtaaatttgaaacgtctctaaaa-tta-aaaaacttca-ttcaaaaaaaATCGGCCACAGGGGAA-GAGGGATATTGGTAAATTGGACT------------------------------------tcaaggaaatgaaaagcc---------gttgga-tgaaaatgcacacaacagg-ta-ttcctgatgaaagacttgcattaagaataca-ctt-------attcttaataactatgg-gaacccagcaa-taaac--agtactacctaattctaaaaaatgggcaaaagactcaagcaaacactttggaag-atacacaaatagttgat i calJac3.chr2 I 8 C 0 s cebCap1.NW_016107703v1 423150 463 - 2125214 tcctggcacagaaaatggccatctgag-gaacaggggggaaatcaaataaaccgcgggc-tttagctaatgattatatagcaatatgtgttcattaattctgacaaatataccatgctaatgtaaggtattaataatcaggaaa-tcgtg--tgaattatatggg-aactc-tcactatctttataacaattctgtaaatttgaaacatctctaaaa-tta-aaaaacttca-ttt-aaaaaaaCCAGCCACAGGGGAA-GAAGGATGTCGGTAAATTGGACT------------------------------------TCAAGgaaatgaaaagcc---------ataggg-tgaaaatgcacacaacagg-ta-ttcctgatgaaagacttgcattaagaataca-cttattcttaattcttaataactctgg-aaaaccagcaa-taaacagagtactatctaattctaaaaaatgggcaaaagactcgagccaacactttggaag-atacacaaatagctgat i cebCap1.NW_016107703v1 I 8 C 0 s aotNan1.NW_018514293v1 45884 450 + 376347 tcctggcacagaaaatggccatctgag-gaacagggaggaaatcaaataaaccgtgggc-tctggctaatgattatacagcaatatgtgttcattaattctgacacata-------------ttaggtattaataatcgggaaa-tcgtg--tgaagtctatggg-aactc-tcactatctttataacaattctgtaaatctgaaacgtctctaaaa-tta-aaGAACCTCA-TTC-AGAAAAGCCAGACACAGGGGAA-GAGGGATATCGGTAAATTGGACT------------------------------------TCAAGGAAATGAAGAGCC---------ATTGGG-TAAAAATGCACACAACAGG-TA-TTCCTGATGAAAGACTTGCATTGAGAATACA-Cttatccttaattcctaataactctgg-aaacccagcaa-tagacagagtactatctaattctaaataatgggcaaaagactcgagcaaacactttggaag-atacacaaatagctgat i aotNan1.NW_018514293v1 I 8 C 0 s otoGar3.GL873611 2165698 477 - 8137123 --------tagaaaaaggccaccagagagaaaatgaggggattggaataaactgtgggc-tttagttaatgattatgtgccaatgttagttcattaattctaacaaacctgccacactaacgtaagacattagtaacagagaac-ctggggatgaagtctatgga-aactctgcactatctttaaaactattctataaacctgaagcttttctaaaa---t-acaaagtttatttt-tacaaaagcagccata-aggagggaaggagattggtaaattggactttatcaaagtttaaaatgactcatcaaaaaactttctcaagaaaatgaaaagtcaagctacagattggg-tgaaaatatgcacatcgga-ca--acccagagaaaggcttgtactaagactcta-c--------------aaacaactctgg-aaactcaacaa-caaaaaga-ta--gcctagtctgaaaaagtggtc--------tgagcaagcacttcaggga-atgctcaaatagttgat i otoGar3.GL873611 C 0 C 0 a score=243477.000000 s hg38.chr3_KI270784v1_alt 95237 34 + 184404 gagtttgaga-aaagctgctcagcctcgtagtg-at s panTro5.chr10 7578 32 + 135926727 gag--tgaga-aaagctg-tcagcctcgtagtgaat i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 29523 34 - 432965 gagtttgaga-aaagctgctcagccttgtagtg-at i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 93227 34 + 85365473 gagtttgaga-aaaggtgctcagcctcgtagtg-at i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934014 34 + 185818997 GAGTTTGAgg-aaaggtgctcagcctcgtagtg-at i rheMac8.chr3 I 79 C 0 s macFas5.chr3 33549953 34 + 192294377 GAGTTTGAGG-AAAGGTGCTCAGCCTCGTAGTG-AT i macFas5.chr3 I 79 C 0 s macNem1.NW_012019910v1 4311306 34 - 9440265 GAGTTTGAGG-AAAGGTGCTCAGCCTCGTAGTG-AT i macNem1.NW_012019910v1 I 119 C 0 s cerAty1.NW_012002954v1 16900953 34 - 21915920 GAGTTTGAGG-AAAGGTGCTCAGCCTCATAGTG-AT i cerAty1.NW_012002954v1 I 79 C 0 s chlSab2.chr28 40703 34 - 21531802 GAGTTTGAGG-GAAGGTGCACAGCCTCGTAGTG-AT i chlSab2.chr28 I 39 C 0 s manLeu1.NW_012101810v1 64820 34 - 2515279 GAGTTTGAGG-AAAGGTGCTCAGCCTCGTAGTG-AT i manLeu1.NW_012101810v1 I 79 C 0 s colAng1.NW_012117710v1 221194 33 + 6586416 gagtttgagg--aaggtgctcagcctcgtagtg-at i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146586473 34 - 204313951 gagtttgaga-aaaggtgttcagcctgatagtg-at i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 423613 34 - 2125214 gagtttgaga-aaaggtgttcagcctggtaggg-at i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 46334 34 + 376347 gagtttggga-aaaggcgctcagcCTGGTAGTG-AT i aotNan1.NW_018514293v1 C 0 I 72 s otoGar3.GL873611 2166175 35 - 8137123 aagtttgagaaaaagaggttcaacttcttagtt-ct i otoGar3.GL873611 C 0 C 0 a score=41080.000000 s hg38.chr3_KI270784v1_alt 95271 5 + 184404 cagga s panTro5.chr10 7610 5 + 135926727 cagga i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 29557 5 - 432965 cagga i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 93261 5 + 85365473 cagga i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934048 5 + 185818997 cagga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33549987 5 + 192294377 CAGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4311340 5 - 9440265 CAGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16900987 5 - 21915920 CAGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 40737 5 - 21531802 CAGGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 64854 5 - 2515279 CAGGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 221227 5 + 6586416 caggA i colAng1.NW_012117710v1 C 0 I 207 s calJac3.chr2 146586507 5 - 204313951 cagga i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 423647 5 - 2125214 cagga i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2166210 5 - 8137123 ctgga i otoGar3.GL873611 C 0 C 0 e aotNan1.NW_018514293v1 46368 72 + 376347 I a score=447544.000000 s hg38.chr3_KI270784v1_alt 95276 101 + 184404 ----------------agtgcaactgaaaaatctcagtgggacgccctgcacgcccgccagggtgc----aggcagaaagaggctgac-aacacgacag-t-gaggcttatgccaagcaaccgg s panTro5.chr10 7615 98 + 135926727 ----------------ag-gcaactg-aaaatctcagc-ggacgccctgcacgcccgccagggtgc----aggcagaa--aggctgacaaacacgacagtt-gaggcttatgccaagcaactgt i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 29562 98 - 432965 ----------------agtgcaactg-aaaatctcagtgggacgccctgcacgcccgccagggtgc----aggcggaa--aggctgac-aacacgacag-t-gaggcttatgccaagcaactgg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 93266 97 + 85365473 ----------------aatgcaactg-aaaatctcagtgggacgccctgcacgcccgccagggtgg----aggtggaa--aggctgac-aaca-gacag-t-gaggcttatgccgagcaactgg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934053 98 + 185818997 ----------------cgtggaactg-gaaatatccgtggcagcccctgcacgcccgccggggtgg----aagcggaa--aggctgac-aacacgacag-t-gaggcttatgctggggaactgg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33549992 98 + 192294377 ----------------CGTGGAACTG-GAAATATCCGTGGCAGCCCCTGCACGCCCGCCGGGGTGG----AGGCGGAA--AGGCCGAC-AACACGACAG-T-GAGGCTTATGCTGGGGAACTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4311345 98 - 9440265 ----------------CGTGGAACTG-GAAATATCCGTGGCAGCCCCTGCACGCCCGCCGGGGTGG----AGGCGGAA--AGGCCGAC-AACACGACAG-T-GAGGCTTATGCTGGGGAACTGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16900992 98 - 21915920 ----------------CGTGGAACTG-GAAATATCCGTGGCAGCCCCTGCACGCCCGCCGGGGTGG----AGGCGGAA--AGGCCGAC-AACAGGACAG-T-GAGGCTTATGCTGGGGAACTGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 40742 98 - 21531802 ----------------CGTGGAACTG-GAAATATCCGTGGCAGCCCCTGCATGCCCGCCGGGGTGG----AGGCGGAA--AGGCCGAC-AACACGACAG-T-GAGGCTTATGCCAGGGAACTGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 64859 98 - 2515279 ----------------CGTGGAACTG-GAAATATCCGTGGCAGCCCCTGCACGCCCGCCGGGGTGG----AGGCGGAA--AGGCCAAC-AACACGACAG-T-GAGGCTTACGCTGGGGAACTGG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146586512 98 - 204313951 ----------------agcgcaactg-agcgtctcagtgggatgccctgcactcccaccagggtgg----agatggaa--aggctgac-aacacaacaa-t-gaggcttgtaccctgcatctgg i calJac3.chr2 C 0 I 1 s cebCap1.NW_016107703v1 423652 98 - 2125214 ----------------agcgcaactg-agcatctcagtgggatgccctgcactcccaccagggtgg----agacggaa--aggctgac-aacacaatgg-t-gaggcttgtaccgtgcatctgg i cebCap1.NW_016107703v1 C 0 I 1 s otoGar3.GL873611 2166215 119 - 8137123 aatgcagagaaatggaaatgcagcag-aaaatctcagacggaagctctccacgcccatcagaatggctaagatctaaa--aggctcaa-agcaccaagg-tgggggactgtgtggtgcatctgg i otoGar3.GL873611 C 0 C 0 e aotNan1.NW_018514293v1 46368 72 + 376347 I e colAng1.NW_012117710v1 221232 207 + 6586416 I a score=1425485.000000 s hg38.chr3_KI270784v1_alt 95377 263 + 184404 -atcct------catcgcctctggggacagcctggaatgtggccaccacttaggaccatggcttggaaatatcttaAATCCAACGTATTTCTACATG-CTAGTGATGCTGCTCATCAAGGGGGTGAGCACTC-ATGGGCTGGGGATG-C-TACAGGGTCCTCA-GTGCCTGCCCATTTCACAGGACGGGAGACTGAGGTCTAGAGGGAGG-CA-ACAGCCAAGGAGGCCCTGGATCCAACGCCTCGCCCAAGCCACCACGGCTGCCTCCTCCTCTGG s panTro5.chr10 7713 255 + 135926727 -tcgct------catcgcctct-gggagag-ctgg-atgtgg-caccacttaggaccatgacttggaaatatcttaaatcaaacgtatttctacatgcctagtgatgctgctcATCAAGGGGGTGAGCATCC-ATGGGCT-GGGATGCC-TACAGTGTCCTCAGGTGCCTGCCCATTTCACA-GACGGAGAACTGA-GTCTAGCAGGAGGCCA-ACAGCAAGCGACACCCTGGAT-CAACGCCTCACC--AG-CACCACGGCTGcctcctcctct-g i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 29660 260 - 432965 -atcct------c-tcgcctct-gggggagcctggaatgtggccaccacttaggaccatggcttggaaatatcttaaatccaacgtatttctacATG-CTAGTGATGCTGCTCATC-AGGGGGTGAGCACTC-ATGGGCTGGGGATG-C-TACAGGGTCCTCA-GTGCCTGCCCATTTCACAGGACAGGAGACTGAGGTCTAGAGGGAGG-CA-ACAGCCAAGGACGCCCTGGATCCAATGCCTCGCCCAAGCCACCACGGCTGcctcctcctctgg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 93363 263 + 85365473 -atcct------catcgcctctggggagagcctggagtgtggccaccacttaggatgatggctaggaaatatcttaAATCCAATGTATTTCCCCATG-CTAGTGATGCTGCTCATCATGGGGGTGAGCAGTC-ATGGGCTGGGGATG-C-TACAGGGTCCTCG-GTAGCTGCCCATTTCACAGGACAGGAGACTGAGGTCTAGAGGGAGG-CA-ACAGCCAAGGACGCCCTGGATCCAGCGCCTCGCCCAAGCCACCACGGCTGcctcctcctctgg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934151 261 + 185818997 -atcct------catcgcctct-gggggac-ctggaatgtggcctccacttaggacaatggcttggAAATGCCTTAAATTCCATGTATTTCTACATC-CTAGTGATGCTGCTCACCATGGGGGTAACCACTC-CTGAGCTGGGGATG-C-CACCGGGTCCTCA-GTGCCCGTTCATTTCATGCGACAGGAGACTGAGGTCTAGAGGGAGG-CA-ACAGCCAAGGATGCCCTGGATCCAATGCCTCACACAAGGCACCGTGGCTGCCTGCTTCTCCGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33550090 261 + 192294377 -ATCCT------CATCGCCTCT-GGGGGAC-CTGGAATGTGGCCTCCACTTAGGACAATGGCTTGGAAATGCCTTAAATTCCATGTATTTCTACATC-CTAGTGATGCTGCTCACCATGGGGGTAACCACTC-CTGAGCTGGGGATG-C-CACCGGGTCCTCG-GTGCCCGTTCATTTCATGCGACAGGAGACTGAGGTCTAGAGGGAGG-CA-ACAGCCAAGGATGCCCTGGATCCAATGCCTCACACAAGGCACCGTGGCTGCCTGCTTCTCCGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4311443 261 - 9440265 -ATCCT------CATCGCCTCT-GGGGGAC-CTGGAATGTGGCCTCCACTTAGGACAATGGCTTGGAAATGCCTTAAATTCCATGTATTTCTACATC-CTAGTGATGCTGCTCACCATGGGGGTAACCACTC-CTGAGCTGGGGATG-C-CACCGGGTCCTCG-GTGCCCATTCATTTCATGCGACAGGAGACTGAGGTCTAGAGGGAGG-CA-ACAGCCAAGGATGCCCTGGATCCAACGCCTCACACAAGGCACCGTGGCTGCCTGCTTCTCCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16901090 261 - 21915920 -ATCCT------CATCGCCTCT-GGGGGAC-CTGGAATGTGGCCTCCACTTAGGACAATGGCTTGGAAATGCCTTAAATTCCATGTATTTCTACATC-CTAGTGATGCTGCTCACCATGGGGGTAAGCACTC-CTGAGCTGGGGATG-C-CACCGGGTCCTCG-GTGCCCGTTCATTTCATGCGACAGGAGACTGAGGTCTAGAGGGAGG-CA-ACAGCCAAGGATGCCCTGGATCCAGCGCCTCACACAAGGCACCGTGGCTGCCTCCTTCTCCGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 40840 261 - 21531802 -ATCCT------CGTTGCCTCT-GGGGGGC-CTGGAATGTGGCCTCCACTTAGGACAATGGCTTGGAAATGCCTTAAATTCCATGTATTTCTACATC-CTAGTGATGCTGCTCACCATGGGGGTAAGCACTC-CTGAGCTGGGGATG-C-CACGGGGTCCTCG-GTGCCCGTTCATTTCATGCGACAGGAGACTGAGGTCTAGAGGGAGG-CA-ACAGCCAAGGATGCCCTGGATCCAATGCCTCACACAAGGAACCGTGGCTGCCTCCTTCTCCGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 64957 260 - 2515279 -ATCCT------CATCGCCTCT-GGGGGAC-CTGGAATGTGGCCTCCACTTAGGACAATGGCTTGGAAATGCCTTAAATTCCATGTATTTCTACATC-CTAGTGATGCTGCTCACCATGGGGGTAAGCACTC-CTGAGCTGGGG-TG-C-CACCGGGTCCTCG-GTGCCTGTTCATTTCATGTGACAGGAGACTGAGGTCTAGAGGGAGG-CA-ACAGCCAAGGATGCCCTGGATCCAACGCCTCACACAAGGCACCGTGGCTGCCTCCTTCTCCGG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146586611 262 - 204313951 -atcct------catcgcctctgaagagagcctcaaatgtgactggcacttaggacaatggcttggaaatgtcttaaatccaacgtatttctaAATT-CTAGTGA---TGCTCATCATGGGGGTGGGCACTCAAAGGACTGAGGACG-CTTACAGGGTCCTCA-GTGCCTGCCCATTTCACAGGACAGGAGGCTGAGGTCTAGAGGGAGG-CA-ACAGCCAAGGACGACCTGGGTACCACACCTCATCCAAGCCACCATGGCTGcctcctcctcatg i calJac3.chr2 I 1 C 0 s cebCap1.NW_016107703v1 423751 249 - 2125214 -atcct------catcgcctctgaagagagccttgaatgtggccgccacttaggacaatggcttggaaatgtcttaaatccaacatatttctaTATC-CTAGTGA---TGCTCATTGTTGGGGTGGGGACTCAACAGACTGAGGATG-C-TACAGGGTCCTCG-GTGCCTGCCCATTTCACAGGACAGGAGGCTGAGGTCTAGAGGGAGG-CA-ACAGCCAAGGACAACCTGGATCCCACACCTCACCCAAGcca------------cctcctcatg i cebCap1.NW_016107703v1 I 1 C 0 s aotNan1.NW_018514293v1 46440 259 + 376347 -ATCCT------CACCGCCTCTGAAGAGAGCCTCGAATGTGGCCACCACTTAGGACAATGGCTTGGAAATGTCTTAAATCCAA-GTATTTCTAACTC-CTAGTGA---TGCTCATCGTGGGGCAGGGCACTCAACAGACTGAGGACG-C-TACAGGGTCCTCG-GTGCCTGCCCACTTCACAGGACGGGAGGCTGAGGCCTAGAGGGAGG-CA-ACAGCCAAGGACGACCTGGATCCCACACCTCACCCAAGCCACCACGGCTGCC-cctcctcatg i aotNan1.NW_018514293v1 I 72 C 0 s otoGar3.GL873611 2166334 238 - 8137123 aatgctggagcacatcacagct-aagaata--tagaatgttgcagccacctaggacaagagcatggaaattctctagatccattgtatttcaatatc-ccagtaa---tgccCATGGGGAGCAGAAGTTCCC-AGGGACTGAGGAAG-C-TGCAGAGTCCTTG-GGTTCTTCCCACTCCACA-GGCAGGAGACTGAGGTCCAGAGGAAGG-TGTACAGCCATGGCTGCCCTGGGTCCA-----------------------CTGCCTCCTCCTC--- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 221232 207 + 6586416 I a score=97648.000000 s hg38.chr3_KI270784v1_alt 95640 13 + 184404 CCCCTCCATCTCC s panTro5.chr10 7968 13 + 135926727 cccctccatctcc i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 29920 13 - 432965 cccctccatctcc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 93626 13 + 85365473 cccctccatctcc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934412 13 + 185818997 CCCCCCCATCTTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33550351 13 + 192294377 CCCCCCCATCTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4311704 13 - 9440265 CCCCCCCATCTTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16901351 13 - 21915920 CCCCCCCATCTTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 41101 12 - 21531802 -CCCCCCATCTTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 65217 13 - 2515279 CCCCCCCATCTTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 221439 13 + 6586416 cccccccatcttc i colAng1.NW_012117710v1 I 207 C 0 s calJac3.chr2 146586873 13 - 204313951 cccctctatctcc i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 424000 13 - 2125214 cccctccatctcc i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 46699 13 + 376347 cccctccacctcc i aotNan1.NW_018514293v1 C 0 I 188 e otoGar3.GL873611 2166572 0 - 8137123 C a score=716832.000000 s hg38.chr3_KI270784v1_alt 95653 161 + 184404 CCCACTCCTTCT---CCCCCTTGTCCCCCTTCTCCTTCTCCCAC--Ccctcctcctcctctccctcctcc------tcatccattgtcctccttgtcc---------------tccttg---------------tccccctccttgtcattctcctcttcctcctagtcctccttct---cctcctccttctcc--------ccctccttatt s panTro5.chr10 7981 146 + 135926727 cac-ttccttcttc-tccccttgt-ccccttc-ccttctcccac--ccctcctactcctctccctcctcct-----tcatccattgtccccttt------------------------------------------cccctccttgtcattctcctc-tcctcctagtcctccttct---cctcctccttct----------ccctcctcatt i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015914v1 29933 170 - 432965 cccactccttcttctcccccttgttccccttctccttct-ccac--ccctcctcctcctctccctcctcct---cctcatccattgtcctccttgtcc---------------tcct-------------------accctccttgtcattctcctcttcctccttctcctccttct-cccctcctcattctcttcct--tgtcctccttatt i gorGor5.CYUI01015914v1 C 0 N 0 s nomLeu3.chr20 93639 195 + 85365473 cccactccttcttctcccccttgtcgcccttctccgtctccca---ccctcctactcctctccctcctcctcctcctcattcgtcgttctcctcatcc---------------tccttgtccctctcttcctcatccccctccttgtcattctcctcttcctcctcgtcctccttctccccctcctcattctcttccttctccctgactcatt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934425 173 + 185818997 C---CTCCTTCTTCTCCCCCTTGTCCCCCTTCTCCCTCTCCCAC--Ccctcctcctcctctccctcctcct---cctcatccgttctcctccttgtcc---------------ctct---------cttcctcatccccctccttgtcattctcctcctcctcctagtcctccttct---cctcctccttatccctc-----ttctccctgtt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33550364 173 + 192294377 C---CTCCTTCTTCTCCCCCTTGTCCCCCTTCTCCCTCTCCCAC--Ccctcctcctcctctccctcctcct---cctcatccgttctcctccttgtcc---------------ctct---------cttcctcatccccctccttgtcattctcctcctcctcctagtcctccttct---cctcctccttatccctc-----tcctccctgtt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4311717 173 - 9440265 C---CTCCTTCTTCTCCCCCTTGTCCCCCTTCTCCCTCTCCCAC--Ccctcctcctcctctccctcctcct---cctcatccgttctcctccttgtcc---------------ctct---------cttcctcatccccctccttgtcattctcctcctcctcctagtcctccttct---cctcctccttatccctc-----tcctccctgtt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16901364 173 - 21915920 C---CTCCTTCTTCTCCCCCTTGTCCCCCTTGTCCCTCTCCCAC--Ccctcctcctcctctccctcctcct---cctcatccgttctcctccttgtcc---------------ctct---------cttcctcatccccctccttgtcattctcctcctcctcctagtcctccttct---cctcctccttatccctc-----tcctccctgtt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 41113 169 - 21531802 C---CTCCTTGTTCTCCCCCTTGTCCCCCTTCTCCCTCTCCCAC--CCCTCCTCCTCCTCTCCCTCCTCCT---CCTCATCCATTCTCCTCCTTGTCC---------------CTCT---------CTTCCTCATCCCCC----TGTCATTCTCCTCCTCCTCTTAGTCCTCCTTCT---CCTCCTCCTTATCCCTG-----TCCTCCCCATT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 65230 170 - 2515279 C---CTCCTTTTTCTCCCCCTTGTCCCCCGTCTCCCTCTCCCAC--Ccctcctcctcctctccctcctcct---cctcatccgttctcctccttgtcc---------------ctct---------cttcctcatccccctccttgtcattcttctcctcctcctagtcctc---ct---cctcctccttatccctc-----tcctccctgtt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 221452 161 + 6586416 c---ctccttcttctcccccttgtcccccttctccctctccca-----ctccccctcctctccctcctcct---cctcatccgttctcctccttgtcc---------------ctct---------cttcctcatccccctccttgtcattcttctcctcctcctagtcctccttct---c---------atctccc-----tcctccccatt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146586886 171 - 204313951 ------tctccttctctgccttgtctcccctctccttctcccactgccctcctcctcttcctct------t---cctcatccattctc---cttgtctgcttcttcatcctcgccct---------cttcctcatccccctcctagtcattctcctcct-ctcctaatcctccttct---cttcctcttct-----------ccctcctcatt i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 424013 180 - 2125214 ------tctccttctccaccttgtcccccttctccttctcccactaccctcttcctcttcctcttcctcct---cctcatccattctccttcttgtctgcttcctcaccctcaccct---------cttcctcatccccctccttgtcattctcctcct-ctcctagtcctccttct---cctcctcttct-----------cactcctcatt i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2166572 69 - 8137123 -------------------------------------------------CCCTCCTCCTTTCCTTTTTACT---TCTC---------TCTTCATGTCC---------------CCCC------------------------------CATCCCTATACCcctccccctctttctt-------------------------------------- i otoGar3.GL873611 C 0 C 0 e aotNan1.NW_018514293v1 46712 188 + 376347 I a score=289808.000000 s hg38.chr3_KI270784v1_alt 95814 91 + 184404 ctcctccttctcc---------------ccgattcctcctccttctccccaactcct------cctccttctccctgactcctcctccttcacctcc---tccttgtcctcctcc s panTro5.chr10 8127 88 + 135926727 ctcttccttgtcct--------------cctcattctcctccttct-cctgactcct-------ctccttctccc-gac-cctcctccttcacctcc---tccctctcctcctcc i panTro5.chr10 C 0 I 13 s gorGor5.CYUI01015884v1 268 87 + 508821 ctcctccttctcc---------------ccgactcctcctccttcacctc--ctcct------tgtcctcctccc--tctcctgctcctcatcctcc---tccttgtcttcttct i gorGor5.CYUI01015884v1 N 0 C 0 s nomLeu3.chr20 93834 92 + 85365473 ctcctccttctcc---------------ccaactcctcccccttcttcac--ctcctcctcgtcctccttctccc--tctcctcctccccatcctcc---tccttgtcctcttc- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934598 108 + 185818997 ctcttccttgtcctcattctcctcctccctgactcattctccttcttcac--ctcctccttgtcctccttctccc--tctcttcctcctcatcctcc---tccttgtcctcttct i rheMac8.chr3 C 0 I 27 s macFas5.chr3 33550537 108 + 192294377 ctcttccttgtcctcattctcctcctccctgactcattctccttcttcac--ctcctccttgtcctccttctccc--tctcttcctcctcatcctcc---tccttgtcctcttct i macFas5.chr3 C 0 I 27 s macNem1.NW_012019910v1 4311890 108 - 9440265 ctcttccttgtcctcattctcctcctccctgactcattctccttcttcac--ctcctccttgtcctccttctccc--tctcttcctcctcatcctcc---tccttgtcctcttct i macNem1.NW_012019910v1 C 0 I 27 s cerAty1.NW_012002954v1 16901537 105 - 21915920 ctcttccttgtcctcattctcctccttcccgactcattctccttcttcac--ctcctc---gtcctccttctccc--tctcttcctcctcatcctcc---tccttgtcctcttct i cerAty1.NW_012002954v1 C 0 I 27 s chlSab2.chr28 41282 81 - 21531802 CTCTTCCTTGTCCTCATTCTCCTCCTCCCCGACTCATTCTCCTTCTTCAC--CTCCTCCTTGCcctccttctccc--tctcctcc------------------------------ i chlSab2.chr28 C 0 I 3 s manLeu1.NW_012101810v1 65400 108 - 2515279 ctcttccttgtcctcattctcctcctccccgactcattctccttcttcac--ctcctccttgtcctccttctccc--tctcttcctcctcatcctcc---tccttgtcctcttct i manLeu1.NW_012101810v1 C 0 I 27 s colAng1.NW_012117710v1 221613 81 + 6586416 ctcttccttgtcctcattctcctcctccccgactcattctccttcttcac--ctcctccttgttctccttctccc--tctcctcc------------------------------ i colAng1.NW_012117710v1 C 0 I 3 s calJac3.chr2 146587057 76 - 204313951 ctcatccttgtcct-----------------------------------c--ctcgtcctcttcctAATTCTCCC--CCTAATTctccttcgccacctcttccttgttcttctcc i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 424193 73 - 2125214 ctcgtccttgtcct-----------------------------------c--ctcgtcctcttcctaattctccc--tctaattcttctccgctgcc---tccttgttcttctcc i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2166641 45 - 8137123 --------------------------------------ttacttcttc-c--ctcccccttgtccttccttcccc--cttcctcttcc--------------------------- i otoGar3.GL873611 C 0 C 0 e aotNan1.NW_018514293v1 46712 188 + 376347 I a score=27805.000000 s hg38.chr3_KI270784v1_alt 95905 8 + 184404 ctctccgc s gorGor5.CYUI01015884v1 355 5 + 508821 ---tcctc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 93926 6 + 85365473 --ttcctc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934733 8 + 185818997 tcatcctc i rheMac8.chr3 I 27 C 0 s macFas5.chr3 33550672 8 + 192294377 tcatcctc i macFas5.chr3 I 27 C 0 s macNem1.NW_012019910v1 4312025 8 - 9440265 tcatcctc i macNem1.NW_012019910v1 I 27 C 0 s cerAty1.NW_012002954v1 16901669 8 - 21915920 tcatcctc i cerAty1.NW_012002954v1 I 27 C 0 s chlSab2.chr28 41366 8 - 21531802 tcatcctc i chlSab2.chr28 I 3 C 0 s manLeu1.NW_012101810v1 65535 8 - 2515279 tcatcctc i manLeu1.NW_012101810v1 I 27 C 0 s colAng1.NW_012117710v1 221697 8 + 6586416 tcatcctc i colAng1.NW_012117710v1 I 3 C 0 s calJac3.chr2 146587133 8 - 204313951 taattcac i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 424266 8 - 2125214 taattctc i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2166686 3 - 8137123 -----ctc i otoGar3.GL873611 C 0 C 0 e aotNan1.NW_018514293v1 46712 188 + 376347 I e panTro5.chr10 8215 13 + 135926727 I a score=223816.000000 s hg38.chr3_KI270784v1_alt 95913 60 + 184404 ctcctc---------------atccccctcttcc------tcttcct---------------------------------------------------aattctcctcctctgcctcctcctTGTCCTCTCC s panTro5.chr10 8228 54 + 135926727 ctcctc---------------atccccctcctcc------tcttcct---------------------------------------------------a----tcctcctctgcctcctccttgt-ctct-c i panTro5.chr10 I 13 C 0 s gorGor5.CYUI01015884v1 360 60 + 508821 ctcctc---------------atcctcctcctcc------tcttcct---------------------------------------------------aattctcctcctctgcctcctccttgtcctctcc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 93932 60 + 85365473 ctgttc---------------atccccctcctcc------tcttcct---------------------------------------------------aattctcctcctctacctcctccttgtcctctgc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934741 60 + 185818997 ctcctt---------------gtcctcttcttcc------tcctcct---------------------------------------------------catccctctcctcctcctAATTCTCCTCGTCTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33550680 60 + 192294377 ctcctt---------------gtcctcttcttcc------tcctcct---------------------------------------------------catccctctcctcctcctAATTCTCCTCGTCTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312033 60 - 9440265 ctcctt---------------gtcctcttcttcc------tcctcct---------------------------------------------------catccctctcctcctcctAATTCTCCTCGTCTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16901677 111 - 21915920 ctcctt---------------gtcctcttcttcc------tcctcctcatccctgtcctcctcctcatcctcctccttgtcctcttcttcctcctcctcatccctctcctcctcctAATTCTCCTCGTCTCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 41374 60 - 21531802 ctcctt---------------gtcctcttcttcc------tcctcct---------------------------------------------------catccctctcctcctcctAATTCTCCTCATCTCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 65543 60 - 2515279 ctcctt---------------gtcctcttcttcc------tcctcct---------------------------------------------------catccctctcctcctcctAATTCTCCTCGTCTCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 221705 60 + 6586416 ttcctt---------------gtccccttcctcc------tcctagt---------------------------------------------------catccccctcctcctcctaattctcctcctctcc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146587141 57 - 204313951 ctcctt---------------gtccttgccttcc---------tcct---------------------------------------------------cattctcctccactgcatcctccttgtcctcacc i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 424274 81 - 2125214 ctccttgtccgaagcctcctcgtccttgccttcctcttcctcttcct---------------------------------------------------cattctcctccgccacctcctccttgtcctcGCC i cebCap1.NW_016107703v1 C 0 I 15 s otoGar3.GL873611 2166689 31 - 8137123 -----------------------------cttcc------tcctctt---------------------------------------------------cattttcctcctcccttcc--------------- i otoGar3.GL873611 C 0 C 0 e aotNan1.NW_018514293v1 46712 188 + 376347 I a score=141386.000000 s hg38.chr3_KI270784v1_alt 95973 26 + 184404 CTCCCCCTTG----------------------TCCTCCTCGTCTTCCT s panTro5.chr10 8282 48 + 135926727 ctcccccttgtcctcctcgtctttccttttcttcctcctcgtcttcct i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 420 26 + 508821 ctcccccttg----------------------tcctcctcgtcttcct i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 93992 26 + 85365473 ctcccccttg----------------------tcctcctcgtcttcct i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934801 26 + 185818997 CTCCTGCTTG----------------------TCCTCCTTGTCTTCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33550740 26 + 192294377 CTCCCGCTTG----------------------TCCTCCTTGTCTTCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312093 26 - 9440265 CTCCCGCTTG----------------------TCCTCCTTGTCTTCCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16901788 26 - 21915920 CTCCCGCTTG----------------------TCCTCCTTGTCTTCCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 41434 26 - 21531802 CTCCCGCTTG----------------------TCCTCCTTGTCTTCCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 65603 26 - 2515279 CTCCCGCTTG----------------------TCCTCCTTGTCTTCCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 221765 26 + 6586416 ctcccccttg----------------------tcctcctcgtcttcct i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146587198 26 - 204313951 tcccccctta----------------------tcctcctcatctttct i calJac3.chr2 C 0 C 0 s otoGar3.GL873611 2166720 25 - 8137123 cctgctctcc----------------------tcctcct-gccttcct i otoGar3.GL873611 C 0 C 0 e aotNan1.NW_018514293v1 46712 188 + 376347 I e cebCap1.NW_016107703v1 424355 15 - 2125214 I a score=3821430.000000 s hg38.chr3_KI270784v1_alt 95999 490 + 184404 TTTCTTCCTCCTCTTCTGTCCCAGGGCTTTCAAACTCTGGCTC-TCTA----------ACGACATGGAAGAGTTAAAAGGAGGAATGCTGGCTCAGCCAAGCCCCGGAGACTCCTACTTGATATGGGCAGTTTAAAGCCACTTTCCCTTT---AAATTTTTCTGTGACAACTCTTTTCATGGAGAAT-GAAAAGACTCTCGTTAAGTGTTGCCATTCAGAAGTGTTGGCGGTCGTTGCTAACATGAGATCCAAC-AAGGTAAATGCCAGAAGCCATCTGCAAGGGGTAATACCTTATTCTGCTTTTGCATAAGTGATGCTACATCCCTTTATCTCTCTGCTGCCGGCCT--TCAGTGCTGATGGCCTG-TGCC-ACCCAATGACTGGTTAAATCAGC-TTGAG--GAAGAGCTCTTTTGAGGCTCTGTCCAGTTTAGCAGGG-GAAACTTCAAAGTCCCAGC-ATCCTGGTCATGGAA-TGCTATGTTAACCCTTTCCAAAGTTTGAGAC-TGAGAT s panTro5.chr10 8330 485 + 135926727 tttcttcctcctcttcTGTCC--AGGCTTTCAAACTCTGGCTCTTCTA----------ACGACATGGAAGAGT--AAAGGAGGAACGCC-GCTCAGCCAAGCCCCAGAGACTCCTACTTGATATGGGCAGTTT-AAGCCACTTTCTTTTTTCCAAATTTTTCTGTGACAACTCTTTTCATGGAGAAT-G-AAAGACTCTCGTTAG--GTTGCCGTTCAGAAGTGTTGGCGGTCGTTGCTAACATGAGATCCAACAAAGGTAAATG-CAGAA-CCATCTC--AGGGGTAAATC--TATTCTTTCTTTGCATACATGATGCTGCATCCCTTTATCTCTCTG-TGCCGGCCTTCTCAGTG-TGATGGCCTGTTGCCAACCCAAT-ACTGGTTAAATCAGCTTTGAGGAGAAGAGCTC-TTTGAGGCTCTGTCCTGTTTAGCAGGGTGAAACTTCAAAGT--CAGCAATCCTGTTCATGGAATTGCTATGTTAACCCTTTCCAAAGTTTGAGACTTGAGAT i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 446 488 + 508821 tttcttcctccccttctGTCCCAGGGCTTTCAAACTCTGGCTC-TCTA----------ATGACATGGAAGAGTTAAAAGGAGGAACGCCGGCTCAGCCAAGCCCCGGAGACTCCTACTTGATATGGGCAGTTTAAAGCCACTTTCCCTTT---AAATTTTTCTGTGACAACTCTTTTCATGGAGAAT-GAAAAGA--CTCGTTAAGTGTTGCCGTTCAGAAGTGTTGGCGGTCGTTGCTAACATGAGATCCAAC-AAGGTAAATGCCAGAAGCCATCTGCAAGGGGTAATATCTTATTCTGCTTTTGCATAAATGATGCTGCATCCCTTTATCTCTCTGCTGCCGGCCT--TCAGTGCTGATGGCCTG-TGCC-ACCCAATGACTTGTTAAATCAGC-TGGAG--GAAGAGCTCTTTTGAGGCTCTGTCCTGTTTAGCAGGG-GAAACTTCAAAGTCCCAGC-ATCCTGGTCATGGAA-TGCTATGTTAACCCTTTCCAAAGTTTGAGAC-TGAGAT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 94018 483 + 85365473 tttcttcctcctcttcTGTCCCAGGGCTTTCAAACTCTGGCTC-TCTA----------ACGACATGGAAGAGTTAAAAGGAGAT------GCTCAGCCAAGCCCC-GAGACTCCTACTTGATATGGGCAGTTTGAAACCACTTTCCCGTG---ACATTTTTCTGTGACAACTCTTTTCATGGAGAAT-GAAAAGACTCTCGTTAAGCGTTGCTGTTCAGAAGTGTTGGCGGTCGTTGCTAACACAAGATCCAAC-AAGGTAAATGCCAGAAGCCATCTGCAAGGGGTAATATCTTATTCTGCTTTTGCATAAATGATGCTGCATCCCTTTATCTCTCTGCTGCCGGCCT--TCAGTGCTGACGGCCTG-TGCT-ACCCAATGACTGGTTCCATCATC-TTGAG--GAAGGGCTCTTTTGAGGCTCTGTCCTGTTTAGCAGGG-GAAACTTCAAAGTCTCAGC-AGCCTGGTCATGGAA-TGCTATGTTAGCTCTTTCCAAAGTTTGAGAC-TGAGAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934827 490 + 185818997 TTTCTTCATCCTCTTCTGTCCCAGTGCTTTCAAACTCTGGCTC-TCCA----------ACGACATGGAAGAGTTAAACGGAGGAACGCCAGCTCAGCCAAGCCCCAGAGACTCCTACTTGATGTGGGCAGTTTAAAACCACTTTTCCACT---AAATTTTTCTGTGACAACTCTTTTCGTGGAGAAT-GAAAAGACTCTCGTTAAGTGTTGCTGTtcagaagtgttggcggtcgttgctaacatgagatccaac-aaggtaaatgccaggagccatctgcaAGGGGTAATACCTCATTCTGCTTTTGCCTAAATGATGCTGCATCCCTTTATCTCTCTGCTGCCGGCCT--TCGGTGCTGAGGGCCTC-TGCC-ACCCAGTGACTGGTTAAATCAGC-TTGGG--GAAGAGCTCTGTTAAGGCTCTGTCCTGCTTAGCAGGG-GAAACTTCAGAGTCTCAGC-ATCCTGGTCATGGAA-TGCTATGTTAGCTCTTTCCAAAGTTTGAGAC-TGAGAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33550766 490 + 192294377 TTTCTTCATCCTCTTCTGTCCCAGTGCTTTCAAACTCTGGCTC-TCCA----------ACGACATGGAAGAGTTAAACGGAGGAACGCCAGCTCAGCCAAGCCCCAGAGACTCCTACTTGATATGGGCAGTTTAAAACCACTTTTCCATT---AAATTTTTCTGTGACAACTCTTTTCGTGGAGAAT-GAAAAGACTCTCGTTAAGTGTTGCTGTTCAGAAGTGTTGGCGGTCGTTGCTAACATGAGATCCAAC-AAGGTAAATGCCAGGAGCCATCTGCAAGGGGTAATACCTCATTCTGCTTTTGCCTAAATGATGCTGCATCCCTTTATCTCTCTGCTGCCGGCCT--TCGGTGCTGAGGGCCTC-TGCC-ACCCAGTGACTGGTTAAATCAGC-TTGGG--GAAGAGCTCTGTTAAGGCTCTGTCCTGCTTAGCAGGG-GAAACTTCAGAGTCTCAGC-ATCCTGGTCATGGAA-TGCTATGTTAGCTCTTTCCAAAGTTTGAGAC-TGAGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312119 490 - 9440265 TTTCTTCATCCTCTTCTGTCCCAGTGCTTTCAAACTCTGGCTC-TCCA----------ACGACATGGAAGAGTTAAACGGAGGAACGCCAGCTCAGCCAAGCCCCAGAGACTCCTACTTGATATGGGCAGTTTAAAACCACTTTTCCATT---AAATTTTTCTGTGACAACTCTTTTCGTGGAGAAT-GAAAAGACTCTCGTTAAGTGTTGCTGTtcagaagtgttggcggtcgttgctaacatgagatccaac-aaggtaaatgccaggagccatctgcaAGGGGTAATACCTCATTCTGCTTTTGCCTAAATGATGCTGCATCCCTTTATCTCTCTGCTGCCGGCCT--TCGGTGCTGAGGGCCTC-TGCC-ACCCAGTGACTGGTTAAATCAGC-TTGGG--GAAGAGCTCTGTTAAGGCTCTGTCCTGCTTAGCAGGG-GAAACTTCAGAGTCTCAGC-ATCCTGGTCATGGAA-TGCTATGTTAGCTCTTTCCAAAGTTTGAGAC-TGAGAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16901814 490 - 21915920 TTTCTTCATCCTCTTCTGTCCCAGTGCTTTCAAACTCTGGCTC-TCCA----------ACGACATGGAAGAGTTAAATGGAAGAACGCCAGCTCAGCCAAGCCCCAGAGACTCCTACTTGATATGGGCAGTTTAAAACCACTTTTCCATT---AAATTTTTCTGTGACAACTCTTTTCGTGGAGAAT-GAAAAGACTCTCGTTAAGTGTTGCTGTtcagaagtgttggcggtcgttgctaacatgagatccaac-aaggtaaatgccaggagccatctgcaAGGGGTAATATCTCATTCTGCTTTTGCCTAAATGATGCTGCATCCCTTTATCTCTCTGCTGCCGGCCT--TCGGTGCTGAGGGCCTC-TGCC-ACCCAGTGACTAGTTAAATCAGC-TTGGG--GAAGAGCTCTGTTAAGGCTCTGTCCTGCTTAGCAGGG-GAAACTTCAGAGTCTCAGC-ATCCTGGTCATGGAA-TGCTACGTTAGCTCTTTCCAAAGTTTGAGAC-TGAGAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 41460 474 - 21531802 TTTCTTCGTCCTCTTCTGTCCCAGTGCTTTCAAACTCTGGCTC-CCCA----------ACGACATGGAAGAGTTAAACGGAGGAACGCCAGCTCAGCCAAGCCCCAGAGACTCCTACTAGATATGGGCAGTTTAAAACCACTTTTCCATT---AAATTTTTCTGTGACAACTCTTTTCGTGGAGAAT-GAAAAGACTCTCGTTAAGTGTTGCTGTTCAGAAGTGTTGGCGGTCGTTGCTAACACGAGATCCAAC-AAGGTAAATGCCAGGAGCCATCTGCAAGGGGTAATACCTCACGCTGCTTTTGCCTAAATGATGCTGCATCCCTTTATCTCTCTGCTGCCGGCCT--TCAGTGCTGGGGGCCTG-TGCC-GCCCAGTGACTGGTTAAATCAGC-TTGGG--GAAGGGCT----------------CTGCTTAGCAGGG-GAAACTTCAGAGTCTCAGC-ATCCTGGTCATGGAA-TGCTATGTTAGCTCTTTCCGAGGTTTGAGAC-TGAGAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 65629 490 - 2515279 TTTCTTCATCCTCTTCTGTCCCACTGCTTTCAAACTCTGGCTC-TCCA----------ACGACACGGAAGAGTTAAACGGAGGAACGCCAGCTCAGCCAAGCCCCAGAGACTCCTACTTGATATGGGCAGTTTAAAATCACTTTTCCATT---AAATTTCTCTGTGACAACTCTTTTCGTGGAGAAT-GAAAAGACTCTCGTTAAGTGTTGCTGTtcagaagtgttggcggttgttgctaacacgagatccaac-aaggtaaatgccaggagccatctgcaAGGGGTAATACCTCATTCTGCTTTTGCCTAAATGATGCTGCATCCCTTTATCTCTCTGCTGCCGGCCT--TCGGTGCTGAGGGCCTC-TGCC-ACCCAGTGACTGGTTAAATCAGC-TTGGG--GAAGAGCTCTGTTAAGGCTCTGTCCTGCTTAGCAGGG-GAAACTTCAGAGTCTCAGC-ATCCTGGTCATGGAA-TGCTATGTTAGCTCTTTCCAAAGTTTGAGAC-TGAGAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 221791 490 + 6586416 TTTCTTCGTCTTCTTCTGTCCCAGTGCTTTCAAACTCTGGCTC-TCCA----------ACGACATGGAGGAGTTAAACGGAGGAACGCCGGCTCAGCCAAGCCCCGGAGACTCCTACTTGATATGGGCAGTTTAAAACCACTTTTCCATT---AAATTTTTCTGTGACAACTCTTTTCATGGAGAAT-GGAAAGACTCTCATTAAGTGTTGCTGTTCAGAAGTGTTGGCGGTCGTTGCTAACACGAGATCCAAC-AAGGTAGATGACAGGAGCCACCTGCAAGGGGTAATACCTCATTCTGCTTTTGTCTAAATGATGCTGTATCCCTTTACCTCTCTGCTGCCGCCCT--TTGGTGCTGGGGGCCTG-TGCC-ACCCAGTGACCGGTTAAATCAGC-TTGGG--GAAGAGCTCTGCTGAGACTCTGTCCTGCTTAGCAGGG-GAAACTTCAGAGTCTCAGC-ATCCTGGTCATGGAA-TGCTATGTTAGCTCTGTCCGAGGTTTGAGAC-TGAGAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146587224 488 - 204313951 -ttcttcctcctcttccATCCCAATGCTTTCAAACACTGGCTC-TCTA----------ATGGCATAGAAGAGTTAAAAGGAGGAACA--GGCTCATCCAAGCCCCAAAGACACCTACTTGATATGGGCAGCTTAAAACCGCTTTCCCATT---AAATTTTTCTGTGACAACTCTTTTCATGGAGAAT-GAAAAGACTCTTGTGAAGTGTTGCTGTTAGGAAGTGTTGGCGGTCGTTGCTAACATGAAATCCAAC-AAGGTAAATGCCAGGAGCCATCTGCAGGCAGTAATATCTTATTCTGCTTTTGCATAAATGATGCTGTGTCCTTTTATTTCTCTGCTGCTTGCCT--TCAGTGCTGATGGCCTG-TGCC-CCCCAGTGACTTGTTAAATCAGC-TTGGG--GAATAGCTCTTTTGAGGCTCTGTCCTGTTTAGCAGGGGGAGACTTCAAAGTCTCAGC-ATCCTGGTCATGGAA-GGCTACATCAGCTCTTTCCAAAGTTTGAGAC-TGAGAT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 424370 489 - 2125214 TTTCTTCCTCCTCTTCCATCCCAATGCTTTCAAACACTGTCTC-TCTA----------ATGACATGGAAGAGTTAAAAGAAGGAACG--GACTAAGCCAAGCCCCAGAGACTCCTACTTGATATGGGCAGCTTAAAACCGCTTTCCCATT---AAATTTTTCTGTGACAACTCTTTTCACGGAGAAT-GAAAAGACTGTCATTAAGTGTTGCTGTtcggcagtgttggcggtcgttgctaacatgagatccaac-aaggtaaatgccaggagccatctgcaGCCACTAATATCTTACTCTGCTTTTGCATAAATGATGCTGCGTCCCTTTATCTCTCTGCTGCCGGCCT--TCAGTGCTGATGGCCTG-TGCC-ACCCAGTGACTGGTTAAATCAGC-TTGGG--GAAGAGCTCTTTTGAGGCTCTGTTCTGTTTAGCAGGGAGAGACTTCAAAGTCTAAGC-ATCCTGGTCATGGAA-GGCTATGTCAGCTCTTTCCAAAGTTTGAGAC-TGAGAT i cebCap1.NW_016107703v1 I 15 I 8702 s aotNan1.NW_018514293v1 46900 487 + 376347 tttcttcctcctcttccgtccCATTGCTTTCAAACACTGGCTC-TCCA----------ATGGCAT-GAAGAGTTAAAAGGAGGAACA--GGCTCAGCCAAGCCCCAGAGACTCCCACTTGATGTGGGCAGCTTAAAACCGTTTTCCCACT---AGATTTTTCTGTGACAGCTCTTTTCATGGAGAAT-GAAAAGACTCTTGTTGCGTGTTGCTGTTGGGAAGTGTTGGCTGTCGTTGCTAACATGAGATCCAAC-AAGGTAAACGCCGGGAGCCACCCGCAGGCACTAATACCTTATTCTGCTTTTGCATAAACGATGCTGCGTCCCTTTATCTCCCTGCTGCCGGCCT--TCAGTGCTGCCGGCCTG-GGCC-ACCCAGTGACTGGTGAAATCAGC-TTGGG--GAA-AGCTCTTTTGAGGCTCTGTCCTGTTTAGCAGGGGGAGACTTCAAAGTCTCAGC-ATCCCGATCATGGAA-GGCTACGTCAGCTCTTTCCAAACTTCGAGAC-TGAGAT i aotNan1.NW_018514293v1 I 188 C 0 s otoGar3.GL873611 2166745 500 - 8137123 cccccttctcctccCCTGTCCCAGAGCTTTCAAGCTCAGGCTC-CCCAGAGCCTACTGATGACACAGAGGAATTAAAAGGAGGAATACAAACTCAGCCAAGCCCTGGAGACTCCTGCTTGATATGGGCAGCTTAAAACTACTTTTCCTTT---ACATTTTTCTGTGACAACTCTTTTCGTGAAGAATCAAAAAGACTCTCATTAAGTCTTGCTGTTCAGAAGTGTCAGCCGGGGTTGCTAACATGAGATTCAGC-AA-GCAAATGCCAGGAGCCATCTGCGAGGGGTAATATTTCATTCCGCTTTTGCATAAATGATGCTAC-CCCCTTTATCTCTGGGCTGCCTGCCT--TCAGTGCTGACAGCCTG-TCCT-GCCCAATGACTAGTACAGTCAGC-CCGGG--GAAGGGCTTCATTACGGCTCTGTTGTATTTAACAAGGGGTAACTTCAAAGTCCCAGC-ATCCCTTTCGAGAAA-TGCAAAGTTAGCTCTTTCCGAAGTTGGACAC-TGATGT i otoGar3.GL873611 C 0 C 0 a score=1255527.000000 s hg38.chr3_KI270784v1_alt 96489 164 + 184404 GGGCAGACCATTTT-AAAG--ACACA-CTGCATCCAGCCTCCCATGACAGAGCCTCAT------GGGAAGGGTGGTGAGCAGGGTCGTGGGGATATTCTA-TCCTGAGCCT-TCCATGTTGGGGCTTCTCGGAGACAGGGGAGGATCACAGCCTCAGTGACTGGCCATT-GGCCAAA s panTro5.chr10 8815 165 + 135926727 GGGCAGACCATTTTAAAAG--ACCCACCTGCAT-CAGCCTCCTATGACAGA-CCTCAT-------GGAAGGGTGGTGAGCA-GGTTGTGGGACTATTCTATTCCTGAGCCTATCCATTGTTGGGCTTCTTGGAGACAGGGGAGGACCAAGCCTTCAGTGACTGGCCATTGGGCCAAA i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 934 164 + 508821 GGGCAGATCATTTT-AAAG--ACACA-CTGCATCCAGCCTCCCATGACAGAGCCTCAT------GGGAAGGGTGGTGAGCAGGGTCGTGGGGATATTCTA-TCCTGAGCCT-TCCATGTTGGGGCTTCTTGGAGACAGGGGAGGACCACAGCCTCAGTGACTGGCCATT-GGCCAAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 94501 163 + 85365473 GGGCAGACCATTTT-AAAG--ACACA-CTGCATCTAGCCTCCCATGACAGAGCCTCAT------GGGAAGGGTGGTGAGCAGGGTCGTGGG-ATATTCTA-TCCTGAGCCT-TCCACGTTGGGGCTTCTTGGAGACAGGGGAGGACCACGGCCTCAGTGACTGGCCATT-GGCCAAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33935317 170 + 185818997 GGGCAGACCATTTT-AAAG--ACACA-CTGCATCTAGCCTCCCATGACAGAGCCTCGTGGGAAGGGGAAGGGTGGTGAGCAGGGTCGTGGGGATTTTCTA-TCCTGAGCCT-TCCATGTTGGGGCTTCTTGGAGACAGGGGAGGGCCACAGCCTCAGTGACTGGCCATT-GGCCAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33551256 170 + 192294377 GGGCAGACCATTTT-AAAG--ACACG-CTGCATCTAGCCTCCCATGACAGAGCCTCGTGGGAAGGGGAAGGGTGGTGAGCAGGGTCGTGGGGATTTTCTA-TCCTGAGCCT-TCCATGTTGGGGCTTCTTGGAGACAGGGGAGGGCCACAGCCTCAGTGACTGGCCATT-GGCCAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312609 170 - 9440265 GGGCAGACCATTTT-AAAG--ACACG-CTGCATCTAGCCTCCCATGACAGAGCCTCGTGGGAAGGGGAAGGGTGGTGAGCAGGGTCGTGGGGATTTTCTA-TCCTGAGCCT-TCCATGTTGGGGCTTCTTGGAGACAGGGGAGGGCCACAGCCTCAGTGACTGGCCATT-GGCCAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16902304 170 - 21915920 GGGCAGACCATTTT-AAAG--ACACG-CTGCATCTAGCCTCCCATGACAGAACCTCATGGGAAGGGGAAGGGTGGTGAGCAGGGTCGTGGGGATTTTCTA-TCCTGAGCCT-TCCATGTTGGGGCTTCTTGGAGACAGGGGAGGGCCACAGCCTCAGTGACTGGCCATT-GGCCAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 41934 170 - 21531802 GGGCAGAGCATTTT-AAAG--ACACG-CTGCATCTAGCCTCCCATGACAGAGCCTCGTGGGAAGGGGAAGGGTGGTGAGCAGGGTTGTGAGGATTTTCTA-TCCTGGGCCT-TCCATGTTGGGGCTTCTTGGAGACAGGGGAGGGCCGCAGCCTCAGTGACTGGCCATT-GGCCAAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 66119 170 - 2515279 GGGCAGACCATTTT-AAAG--ACACG-CTGCATCTAGCCTCCCATGACAGAGCCTCGTGGGAAGGGGAAGGGTGGTGAGCAGGGTCGTGGGGATTTTCTA-TCCTGAGCCT-TCCATGTTGGGGCTTCTTGGAGACAGGGGAGGGCCACAGCCTCAGTGACTGGCCATT-GGCCAAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 222281 170 + 6586416 GGGCAGACCATTTT-AAAG--ACAGG-CTGCATCCAGCCTCCCATGACAGAGCCTCGTGGGAAGGGGAAGGGTGGTGAGCAGGGTCGTGGGGATTTTCTA-TCCTGAGCCT-TCCATGTTGGGGCTTCTTGGAGACAGGGGAGGGCCACAGCCTCAGTGACTGGCCATT-GGCCAAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146587712 159 - 204313951 GGGCAGACCATTTT-AAAG--ACACA-TAGCATCTAGGCTCC-----CTGAGCCTCAT------GGGAAGGGTGGTGAGCGGGGTCATGGGAATTTTCTA-TCCTGAGCCT-TCCATGTCAGGACTTCCTGGAACCAGGGGAGGGCCATAGCCTCAGTGACTGGCCATT-GGCCAGA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 433561 159 - 2125214 gggcagACCATTTT-AAAG--ACACA-CGGCATCTAGGCTCC-----CTGAGCCTCAT------GGGAAGGGTGGTGAGCGGGGTCATGGGAATTTTCTA-TCCTGAGCCT-TCCATGTCAGGGCTTCCTGGAGACAGGGGAGGGCCACAGCCTCAGTGACTGGCCACT-GGCCAGA i cebCap1.NW_016107703v1 I 8702 I 11 s aotNan1.NW_018514293v1 47387 159 + 376347 GGGCAGACCGTTTT-AAAG--ACACA-TGGCATCTAGGCTCC-----CTGAGCCTCAT------GGGAAGGGTGGTGAGCGGGGTCGTGGGAATTTTCTA-TCCTGAGCCT-TCCACGTCAGGACTTCCTGGAGACAGGGGAGGGCCACAGCCTCAGTGACTGGCCATT-GGCCAGA i aotNan1.NW_018514293v1 C 0 I 14 s otoGar3.GL873611 2167245 165 - 8137123 GGGCAGGGTGCTGT-AAAGTTGCATG-CTGACTCCAAGCCTTCTTGATTGGCCTTGGT------AGGGAAGGCAGTGAACAAGGCCTTGGGGAATTTCTA-GACTGAGCCT-CTCACTTCATGATTTCTTGGAGATAGGGAAAGGCTGCA-CCACAGTGACTGGATATT-GGCCAGA i otoGar3.GL873611 C 0 C 0 a score=77035.000000 s hg38.chr3_KI270784v1_alt 96653 18 + 184404 TACACTCATTAAAAT--GCC s panTro5.chr10 8980 18 + 135926727 TACACTCATTAAAGT--GCT i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 1098 18 + 508821 TACACTCATTAAAAT--GCC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 94664 17 + 85365473 TACAC-CATTAAAAT--GCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33935487 17 + 185818997 -ATACTCATTAAAAT--GCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33551426 17 + 192294377 -ATACTCATTAAAAT--GCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312779 17 - 9440265 -ATACTCATTAAAAT--GCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16902474 17 - 21915920 -ATACTCATTAAAAT--GCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 42104 17 - 21531802 -ATACTCATTAAAAT--GCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 66289 17 - 2515279 -ATACTCATTAAAAT--GCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 222451 17 + 6586416 -ATACTCATTAAAAA--GCT i colAng1.NW_012117710v1 C 0 I 12 s calJac3.chr2 146587871 13 - 204313951 -------GTTGGAGCCAGCC i calJac3.chr2 C 0 C 0 s otoGar3.GL873611 2167410 18 - 8137123 TATACTCATCAGAAG--GCT i otoGar3.GL873611 C 0 C 0 e aotNan1.NW_018514293v1 47546 14 + 376347 I e cebCap1.NW_016107703v1 433720 11 - 2125214 I a score=18920.000000 s hg38.chr3_KI270784v1_alt 96671 5 + 184404 CTTCT s panTro5.chr10 8998 5 + 135926727 CTTCT i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 1116 5 + 508821 CTTCT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 94681 5 + 85365473 CTTCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33935504 5 + 185818997 CTTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33551443 5 + 192294377 CTTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312796 5 - 9440265 CTTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16902491 5 - 21915920 CTTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 42121 5 - 21531802 CTTCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 66306 5 - 2515279 CTTCT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146587884 1 - 204313951 ---C- i calJac3.chr2 C 0 C 0 s otoGar3.GL873611 2167428 5 - 8137123 CTTGT i otoGar3.GL873611 C 0 C 0 e aotNan1.NW_018514293v1 47546 14 + 376347 I e cebCap1.NW_016107703v1 433720 11 - 2125214 I e colAng1.NW_012117710v1 222468 12 + 6586416 I a score=13046.000000 s hg38.chr3_KI270784v1_alt 96676 3 + 184404 CCA- s panTro5.chr10 9003 3 + 135926727 CCA- i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 1121 3 + 508821 CCA- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 94686 3 + 85365473 CCA- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33935509 3 + 185818997 CCA- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33551448 3 + 192294377 CCA- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312801 3 - 9440265 CCA- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16902496 3 - 21915920 CCA- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 42126 3 - 21531802 CCA- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 66311 3 - 2515279 CCA- i manLeu1.NW_012101810v1 C 0 C 0 s cebCap1.NW_016107703v1 433731 3 - 2125214 CCA- i cebCap1.NW_016107703v1 I 11 C 0 s otoGar3.GL873611 2167433 3 - 8137123 -CAA i otoGar3.GL873611 C 0 C 0 e aotNan1.NW_018514293v1 47546 14 + 376347 I e calJac3.chr2 146587885 0 - 204313951 C e colAng1.NW_012117710v1 222468 12 + 6586416 I a score=4750.000000 s hg38.chr3_KI270784v1_alt 96679 1 + 184404 G s panTro5.chr10 9006 1 + 135926727 G i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 1124 1 + 508821 G i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 94689 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33935512 1 + 185818997 G i rheMac8.chr3 C 0 I 16 s macFas5.chr3 33551451 1 + 192294377 G i macFas5.chr3 C 0 I 16 s macNem1.NW_012019910v1 4312804 1 - 9440265 G i macNem1.NW_012019910v1 C 0 I 16 s cerAty1.NW_012002954v1 16902499 1 - 21915920 G i cerAty1.NW_012002954v1 C 0 I 16 s chlSab2.chr28 42129 1 - 21531802 G i chlSab2.chr28 C 0 I 16 s manLeu1.NW_012101810v1 66314 1 - 2515279 G i manLeu1.NW_012101810v1 C 0 I 16 s calJac3.chr2 146587885 1 - 204313951 A i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 433734 1 - 2125214 A i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 47560 1 + 376347 A i aotNan1.NW_018514293v1 I 14 C 0 s otoGar3.GL873611 2167436 1 - 8137123 G i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 222468 12 + 6586416 I a score=4539856.000000 s hg38.chr3_KI270784v1_alt 96680 664 + 184404 -----------------GGCTGG---GGACCTGACTC-TCTCAGTCTGTGGGGCCCAGCCCACCTGCTCCTCCCTAATGGCTCCTGCTGGATGGGGAACAGCCTGGCACCAGGTGAACCATCACTGACTCTCCCTGGGGAGAGACGAGGGAGGAGGGGGCATGTC---CAAGA-GGCCAAGGTACAAGCCCAGTGCCCTGCAGGTCTTCCAACATTTCCAGCCTTAATGGCCATGATCGCCATGGTCTGGACTTTCTGAAGAAAGTCTTTTCAC-AGGCTC-GGCCTGGCTGGAATCTGACCTGT-GAAGCCTTTGGGTCAGTC-GCAGGAATTATCAAGCATCTGCCATGCCTGGAAGAGTTGGACTGGGGAG--GCACAGGGCCTGCCTGGCGTCAGGTGCT--GAGGAAGGGAT-GATAAATGCACCCCC---TCTGTTTTGTCCATTTCTCACG-GCCTCTCTGGCCA---------------------CCCTGTCCGCCTGTG-TCTGTCCTGCCCAGCCCTTCTCTGACGAGCG--TGTCTTGGTGCTTTGTCTCTGCTCACCCTGGGCTCATCACTGTAAACAGCAGGAGG--------------TTCCACACCAGGCGAGGTGTGCCATTGTGACTGAAGGTCTCAGGGAACAGAACTGAGTCTGGGTGGGTTGAGCTGGGAGTTTCATAGCTGTAGGAAGCTGCGATCGCAG-CTTCATGATG--CAGACAGAA s panTro5.chr10 9007 641 + 135926727 -----------------GGCTGGCGCCGACCT-ACTCGTCTCAG-CTGTGGGGCCCAGCCCACCTGCTCCTCCCT-ATGGTTC--GCTGGATGGGGAACAG-CTGCCACCAACGTAACCATCACTGACT-TCCCTGGAG-CAGAC-AAGGAGGAGGGG--ATGTC---C-AGA--GCCAA-GTACAAGCCACGTGCCCTG-AGGTCTTCCAACATT--CAGCCGTAATGGCCATGATCACCATGTTGCGACTTCTCTGAACAAAGTC-TTTCAC-AGGCTCGGGCCTGGC-GGAATCTGACCTGTCGAAGCTTTGCGGTCAGTC-GCAGGAA-TATCAAGCATCTGCCATGC---GGAGAGGT-GACTGGGGAG--GCACAGGGCCTGCCTGGTGTCAGGTGCTTGAAGGAAGGGATGGATAAATGAACCCCC---TC--TTTTGTCCGTTTCTCACGCCCCTCTCT-GCCA----------------------CCTGT-CGCCTGTGTTCTGTCCTGGCCCACCCTTCTCTGAC-AGCGT-TGTCTTGGTGCTTTGTCTCTGCTCACCCT-GGCTCATCGCTGTAAACAGCAGGAGG--------------TTCCACCCCAGGCGAGGTGTG-CATTGTGACCGAAGGTCTCAGG--ACAGAATTGAGTCT-GGTGGGTTGAGCT-GGAG-TTCATAG-TGTAGGAAGCTGCGATCGCAGTCTTCATGATAGCCAGACAGAA i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 1125 664 + 508821 -----------------GGCTGG---GGACCTGACTC-TCTCAGTCTGTGGGGCCCAGCCCACCTGCTCCTCCCTAATGGCTCCTGCTGGATGGGGAACAGCCTGGCACCAGGTGAACCATCACTGACTCTCCCTGGGGAGAGACGAGGGAGGAGGGGGCATGTC---CAAGA-GGCCAAGGTACAAGCCCAGTGCCCTGCAGGTCTTCCAACATTTCCAGCCATAATGGCCATGATCACCATGGTCTGGACTTTCAGAAGAAAGTCTTTTCAC-AGGCTC-GGCCTGGCTGGAACCTGACCTGT-GAAGCCTTTGGGTCAGTC-GCAGGAATTATCAAGCATCTGCCATGCCTGGAAGAGTCGGACTGGGGAG--GCACAGGGCCTGCCTGGCGTCAGGCGCT--GAGGAAGGGAT-GATAAATGCACCCCC---TCTGTTTTGTCCATTTCTCACG-GCCTCTCTGGCCA---------------------CCCTGTCCGCCTGTG-TCTGTCCTGCCCAGCCCTTCTCTGATGAGCA--TGTCTTGGTGCTTTGTCTCTGCTCACCCTGGGCTCATCGCTGTAAACAGCAGGAGG--------------TTCCACCCCAGGCAAGGTGTGCCATTGTGACCGAAGGTCTCAGGGAACAGAATTGAGTCTGGGTGGGTTGAGCTGGGAGTTTCATAGCTGTAGGAAGCTGCGATCGCAG-CTTCATGATG--CAGACAGAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 94690 663 + 85365473 -----------------GACTGG---GGACCTGACCC-TCCCCGTCTGCGGGGCACAGCCCACCTGCTCCTCCCTAATGGCTCCTGCTGGACGGGGAACAGCCTGGCACCAGGTGAATCATCACTGACTCTCCTTGGGGAGACACGAGGGAGGCGGCGGCATGTC---CAAGA-GCCCTAGGTAAGAACCCAGTGCCCTGCAGGTCTTCCAACGTTTCCAGCCATAACGGCCATGATCACCATGGTCTGGACTTTCTGAAGAAAGTCTTTTCAC-AGGCTC-GGCCT-GCTGGAATCTGACCTGG-GAAGACTTTGGGTCAGTC-GCAGGAATTATCAGGCATCTGCCAGGCCTGGGAGAGTTGGACTCGGGAG--GCACAGGGCCTGCCTGGCGTCAGGTGCT--GAGGAAGGGAT-GATAAATGCACCCCC---TCTGTTTTGTCCCTTTCTCACG-GCCTCTCTGGCCA---------------------CGCTGTCCGCCTGTG-TCTGTCCCGCCCAGCCCTTCTCTGATGAGCC--TGTCTTGGTGCTTTGTCTCTGCTCACCCTGGGCTCGTCGCTCTAAACAGCAGGAGG--------------TTCCACCCCAGGCGAGGCGTGCCGTTGCGACCGAAGGTCTCAGGGAACAGAACTGAGTCTGAGTGGGTTGAGCTGGGAGTTTCGTAGCTGTAGGAAGCTGAGATCGCAG-CTTCATGATG--CAGAGAGAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33935529 653 + 185818997 -----------------GGTTGA---GGACCTGACCC-TCTGAGTCTGCGGG-----GCCCACCTGCTCCTCCTCAATGGCTCCTGCTGGACAGGGAACAGCCTGGCACCAGGTGAACCATCCCTGACTCTCCTCAGGGAGAGACGAGGGAGGAGGGCGCATGTC---TGAGA-GTCCAAGGTAAGAGCCCACGGCCCTGCAGGTCTTCCAACATTTCCAGCCGTAATGGCCACGATCACCACGGTCTGGACTGTCTGAAGAAGGTCTTTTCAC-AGGCTC-GGCTTGGCTGGAATCTGACCTGT-GAAGCCTTTGGGTCAGTC-GCAGGAATTATCAAGCACCTGCCACGCCTGGAAGAGCTGGACTCGGGGG--GCACAGGGCCTGCCTGGTGTCAGGTGCT--GAGGAAGGGAT-GATAAATGCA-CCCC---TCTGTTTTGTCCCTTTCTGACG-GCCTCTCTGGCCA---------------------CCCTGTCCACCTGTG-TCTGTCCTACCCAGCCCTTCTCTGATGAGC---CGTCCTGGTGCTTTGTCTCTGCTCA---TGGGCTCGCGGCTGTAAACAGCAGGAGG--------------TTCCATCCCAGGTGAGCTGTGCCATTGTGACCGAAGGTCTCAGGGAGCAGAA-TAAGTCTGGGTGGGTTGAGCTGGGAGTTTCGAAGCTGCAGGAAGCTGGGATCGCAG-CCTCATGGTG--TGGAGAGAA i rheMac8.chr3 I 16 C 0 s macFas5.chr3 33551468 653 + 192294377 -----------------GGTTGA---GGACCTGACCC-TCTGAGTCTGCGGG-----GCCCACCTGCTCCTCCTCAATGGCTCCTGCTGGACAGGGAACAGCCTGGCACCAGGTGAACCATCCCTGACTCTCCTCAGGGAGAGACGAGGGAGGAGGGCGCATGTC---TGAGA-GGCCAAGGTAAGAGCCCACGGCCCTGCAGGTCTTCCAACATTTCCAGCCGTAATGGCCACGATCACCACGGTCTGGACTGTCTGAAGAAGGTCTTTTCAC-AGGCTC-GGCTTGGCTGGAATCTGACCTGT-GAAGCCTTTGGGTCAGTC-GCAGGAATTATCAAGCACCTGCCACGCCTGGAAGAGCTGGACTCGGGGG--GCACAGGGCCTGCCTGGTGTCAGGTGCT--GAGGAAGGGAT-GATAAATGCA-CCCC---TCTGTTTTGTCCCTTTCTGACG-GCCTCTCTGGCCA---------------------CCCTGTCCACCTGTG-TCTGTCCTACCCAGCCCTTCTCTGATGAGC---CGTCCTGGTGCTCTGTCTCTGCTCA---TGGGCTCGCGGCTGTAAACAGCAGGAGG--------------TTCCATCCCAGGTGAGCTGTGCCATTGTGACCGAAGGTCTCAGGGAGCAGAA-TAAGTCTGGGTGGGTTGAGCTGGGAGTTTCGAAGCTGCAGGAAGCTGGGATCGCAG-CCTCATGGTG--TGGAGAGAA i macFas5.chr3 I 16 C 0 s macNem1.NW_012019910v1 4312821 653 - 9440265 -----------------GGTTGA---GGACCTGACCC-TCTGAGTCTGCAGG-----GCCCACCTGCTCCTCCTCAATGGCTCCTGCTGGACAGGGAACAGCCTGGCACCAGGTGAACCATCCCTGACTCTCCTCAGGGAGAGACGAGGGAGGAGGGCGCATGTC---TGAGA-GGCCAAGGTAAGAGCCCACGGCCCTGCAGGTCTTCCAACATTTCCAGCCGTAATGGCCACGACCACCACGGTCTGGACTGTCTGAAGAAGGTCTTTTCAC-AGGCTC-GGCTTGGCTGGAATCTGACCTGT-GAAGCCTTTGGGTCAGTC-GCAGGAATTATCAAGCACCTGCCATGCCTGGAAGAGCTGGACTCGGGGG--GCACAGGGCCTGCCTGGTGTCAGGTGCT--GAGGAAGGGAT-GATAAATGCA-CCCC---TCTGTTTTGTCCCTTTCTGACG-GCCTCTCTGGCCA---------------------CCCTGTCCACCTGTG-TCTGTCCTACCCAGCCCTTCTCTGATGAGC---CGTCCTGGTGCTTTGTCTCTGCTCA---TGGGCTCACGGCTGTAAACAGCAGGAGG--------------TTCCATCCCAGGTGAGCTGTGCCATTGTGACCGAAGGTCTCAGGGAGCAGAA-TAAGTCTGGGTGGGTTGAGCTGGGAGTTTCGAAGCTGCAGGAAGCTGGGATCGCAG-CCTCATGGTG--TGGAGAGAA i macNem1.NW_012019910v1 I 16 C 0 s cerAty1.NW_012002954v1 16902516 653 - 21915920 -----------------GGTTGA---GGATCTGACCC-TCTGAGTCTGCGGG-----GCCCACCTGCTTCTCCTCAATGGCTCCTGCTGGACAGGGAACAGCCTGGCACCAGGTGAACCATCCCTGACTCTCCTCAGGGAGAGATGAGGGAGGAGGGCGCATGTC---TGAGA-GACCAAGGTAAGAGCCCACGGCCCTGCGGGTCTTCCAACATTTCCAGCCATAATGGCCACGATCACCACGATCTGGACTGTCTGAAGAAGGTCTTTTCAC-AGGCTC-GGCTTGGCTGGAATCTGACCTGT-GAAGCCTTTGGGTCAGTT-GCAGGAATTATCAAGCACCTGCCACGCCTGGAAGAGCTGGACTCGGGGG--GCACAGGGCCTGCCTGGTGTCAGGTGCT--GAGGAAGGGAT-GATAAATGCA-CCCC---TCTGTTTTGTCCCTTTCTGACA-GCCTCTCTGGCCA---------------------CCCTGTCCGCCTGTG-TCTGTCCTACCCAGCCCTTCTCTGATGAGC---CGTCCTGGTGCTTTGTCTCTGCTCA---TGGGCTCGCGGCTGTAAACAGCAGGAGG--------------TTCCATCCCAGGTGAGCTGTGCCATTGTGACCAAAGGTCTCAGGGAGCAGAA-TAAGTCTGGGTGGGTTGAGCTGGGAGTTTCGAAGCTGCAGGAAGCTGGGATCGCAG-CCTCATGGTG--TGGAGAGAA i cerAty1.NW_012002954v1 I 16 C 0 s chlSab2.chr28 42146 652 - 21531802 -----------------GGTTGA---GGACCTGACCC-TCTGAGTCTGTGGG-----GCCCACCTGCTCCTCCTCAGTGGCTCCTGCTGGACAGGGAACAGTCTGGCACCAGGTGAACCATCCCTGACTCTCCTCAGGGAGAGACGAGGGAGGAGGGCGCATGTC---TGAGA-GGCCAAGGTAAGAGCCCACGGCCCTGCGGGTCTTCCAACATTTCCAGCCGTAATGGCCATGATCACCACGGTCTGGACTGTCTGAAGAAGGTCTTTTCAC-AGGCTC-GGCTTGGCTGGAATCTGACCTGG-GAAGCCTTTGGGTCAGTC-GCAGGAATTACCAAGCACCTGCCACGCCTGGAAGAGCTGGACTCGGGAG--GCACAGGGCCTGCCTGGTGTCAGGTGCT--GAGGAAGGGAT-G--AAATGCA--CCC---TCTGTTTTGTCGCTTTCTCACG-GCCTCTCTGG-CA---------------------CCCTGTCTGCCTGTG-TCTGTCCTACCCAGCCCTTCTCTGACGAGC---CGTCCTGGTGCTTTGTCTCTGCTCACCCTGGGCTCACGGCTGTAAACAGCAGGAGG--------------TTCCATCCCAGGCGAGCTGTGCCATTGTGACCGAAGGTCTCAGGGAGCAGAA-TAAGTCTGGGTGGGGTGAGCTGCGAGTTTCGAAGCTGCAGGAAGCTGGGATCGCAG-CCTCATGGTG--TGGAGAGAA i chlSab2.chr28 I 16 C 0 s manLeu1.NW_012101810v1 66331 653 - 2515279 -----------------GGTTGA---GGACCTGACCC-TCTGAGTCTGCGGG-----GCCCACCTGCTCCTCCTCAATGGCTCCTGCTGGACAGGGAACAGCCTGGCACCAGGTGAACCATCCCTGACTCTCCTCAGGGAGAGACGAGGGAGGAGGGCGCATGTC---TGAGA-GGCCAAGGTAAGAGCCCACGGCCCTGCGGGTCTTCCAACATTTCCAGCCGTAATGGCCATGATCACCACGGTCTGGACTGTCTGAAGAAGGTCTTTTCAC-AGGCTC-GGCTTGGCTGGAATCTGACCTGT-GAAGCCTTTGGGTCAGTC-GCAGGAATTATCAAGCACCTGCCACGCCTGGAAGAGTTGGACTTGGGGG--GCACAGGGCCTGCCTGGTGTCAGGTGCT--GAGGAAGGGAT-GATAAATGCA-CCCC---TCTGTTTTGTCCCTTTCTGACG-GCCTCTCTGGCCA---------------------CCCTGTCCGCCTGTG-TTTGTCCTACCCAGCCCTTCTCTGATGAGC---CATCCTGGTGCTTTGTCTCTGCTCA---TGGGCTCGCGGCTGTAAACAGCAGGAGG--------------TTCCATCCCAGGTGAGCTGTGCCATTGTGACCGAAGGTCTCAGGGAGCAGAA-TAAGTCTGTGTGGGTTGAGCTGGGAGTTTCGAAGCTGCAGGAAGCTGGGCTTGCAG-CCTCATGGTG--TGGAGAGAA i manLeu1.NW_012101810v1 I 16 C 0 s colAng1.NW_012117710v1 222480 653 + 6586416 -----------------GGTTGA---GGACCTGACCC-TCTGAGTCTGCGGG-----GCCCACCTGCTCCTCCTCAATGGCTCTTGCTGGACAGGGAACAGCCTGGCACCAGGTGAACCATCCCTGA--CTCCTCAGGGAGGGACGAGGGAGGAGGGCGTATGTC---TGAGA-GGCCAAGGTAAGAGCCCACGGCCCTGCAGGTCTTCCTGCATTTCCAGCCGTAATGGCCACGATCACCACGGTCTGGACTGTCTGAAGAAGGTCTTTTCAC-AGACTC-GGCTTGGCTGGAATATGACCTGT-GAAGCCTTTGGGTCAGTC-GCAGGAATTATCAAGCACCTGCCACGCCTGGAAGAGTTGGACTCGGGAG--GCACAGGGCCTGCCTGGTGTCAGGTGCT--GAGGAAGGGAT-GATAAATGCA-CCCC---TCTGTTTTGTCGCTTTCTCACG-GCCTCTCTGGCCG---------------------CCCTGGCCGCCTGTG-TCTGTCCTACCCAGCCCTTCTCTGACGAGC---CATCCTGGTGCTTTGTCTCTGCTCA-CCTGGGCTCGAGGCTGTAAACAGCAGGAGG--------------TTCCATCCCAGGCGAGCTGTGCCATGGTGACTGAAGGTCTCAGGGAGCAGAA-TAAGTCTGGGTGGGTTGAGCTGGGAGTTTCCAAGCTGCAGGAAGCTGGGATCGCAG-CCTCATGGTG--CAGAGAGAA i colAng1.NW_012117710v1 I 12 I 18 s calJac3.chr2 146587886 650 - 204313951 -----------------GGCCAA---GGACCTGACCC-TCCGAGTCTGCGGGGCCCAGCCCACCTGCTCCTCCCTAATGACTCCTGGTGGACAGCGAACAGCCTGGCACCAGGTGAACCATCACTGACTCTCCTTGGAGAGAGATGAGGGTGGAGGGGGCATGTC---TGAGA-GGCCAAGGAAAGTGCCCGGGGCCCTGCAGGTCTTCCAGCTTTTCCAGCCAT-----CCAAGATCACTACTGTCTGGACTTTCTGAAAAAGGTATTTTGGT-AGGCTT-GGCTTGGCTGGAGTGTGACCTGT-GAAGTCTTTGGGTCAGTC-GGAGAAATTATCAACCATCTG---------GAAGAGCCGGACTCAGGAG--GCACAGGGCCTGCCTGGCGTCAGGTGCT--GAAGAAGGGAT-GATAAATGCACCCGC---TCTGTTTTTTCCCTCTCTCACG-GCCTCTCT-GCCA---------------------CCCTGTCCACCTGTG-TGTGTCCTACCCAGCCCTTCTCTGATGAGCCTGTGTCTTGATGCCTTGTCTCTGCTCACCCTGGGCTCGTGGCTGTAAACCACAGGAGG--------------TTCCATCCCAGGCAAGG-GTGCCTTTGTGACCGAAGGCCTCAGGGAACAGAATTGAGTCTGGGTGGATTGAGCTGGGAGTTTCATAGCTGTAGGAAGCTGGGATTGCAG-CCTCATGATG--CAGAGAGAA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 433735 648 - 2125214 -----------------GACTGA---GGACCTGACCG-TCCGAGTCTGCGGGGCCCAGCCCACCTGCTCCTCCCTAATGACTCCTGCTGGACAGTGAACAGCCTGGCACCAGGTGAACAATCACTGACTCTCCTTGGAGAGAGAAGAGGGAGGAAGGGACACGTC---TGAAA-GGCCAAGGAAAGCGCCCGAAGCCCT-CAGGTCTTCCAGCATTTCCAGCCAT-----CCATGATCACTACTGTCTGGACTTTCTGAAAAAGGTCTTTTTGC-AGGCTT-GGCTTGGCTGGAGTGTGACCTGT-GAAGCCTTTGGGTCAGTC-GCAGAAATTATCAAGCATCTG---------GAAGAGCTGGACTCGGGAG--GCTCAGGGCTTGCCTGGCGTCAGGTGCT--GAGGAAAGGAT-GATAAGTGCACCCGC---TCTG-TTTTTCCCTCTCTCACG-GCCTCTCC-GCCA---------------------CCCTGTCCACCTGTG-TCTATCCTACCCAGCCCTTCTCTGATGAGCCTGTGTCTTGATGCCTTGTCTCTGCTCACCCTGGGCTAGTGGCTGTAAACCGCAGGAGG--------------TTCCATCCCAGGTGAGG-GTGCCGTTGTGACCGAAGGCCTCAGGGAACAGAATTGAGTCTGGGTGGATTGAGCTTGGAGTTTCATAGCTGTAGGAAGCTGGGATTGCAG-CCTCATGATG--CGGAGAGAA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 47561 639 + 376347 -----------------GGCTGA---GGACCTGACCC-TCCGAGTCTGCGGGGCCCAGCCCACCTGCTCCTCCCTAATGACTCCTGCTGGACGGCGAACAGCCTGGCACCAGGAGAACCATCGCTGACTCTCCTTGGAGAGAGACGAGGGAGGAGGGGGCATGGCATGTCTGA-GGCCAAGGAAAGCGCCCAGGGCCCTGCAGGTCTTCCAGCATTTCCAGCCAT-----CCATGATCACTACTGTCTGGACTTTCTGAAAAAGGTCTTTTCGC-AGGCTT-GGCTTGGCTGGAGTGTGACCTGT-GAAGGCTTTGGGTCAGTC-GCAGAAATTATCAAGCGTCTG---------GAAGAGCTGGACTCGTGAG--GCA--------------CGTCAGGTGCT--GAGGAAAGGAG-GGTAAACGCACCCGC---TCTGTTTTTCCCCTCTCTCATG-GCCTCTCC-GCCA---------------------CCCCGTCCACCCGTG-TCTGTCCTGCCCAGCCCTTCTCTGATGAGCCTGTGTCTGGATGTCTTGTTTCTGCTCACCCTGGGCTCGTGGCTGTAAACCGCAGGGGG--------------TTCCATCCCAGGCGAGG-GTGCCATTGTGACCGAAGGCCTCAGGGAACAGAATTAAGTCTGGGTGGATTGAGCTGGGAGTTTCATAGCTGTAGGAAGCTGGGATTGCAG-CCTCATGATG--CAGAGAGAA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2167437 676 - 8137123 AGCTGGAGCCACGCCCAGGCTGA---GGA-ATGACCT-T--GAGTCAGCAGGGCCCAGCTTACCTGTTCCTCTCTGACTGCTCCCGC-------------------CACCGTGGGGACCATCACTGATTCTTTTCCTGG-GAGATGAGGG----------ATGCC---AGAAATTGCCAAGGTAAGAGTTCAGACCCCTGCGTGGTTTTGAGCATTTCCAGCCTTGCTGGTAACAATCACAAGCATCCAGACCTTCTGAGAAAGGTCCTTTCACAAGGTTA-GGCTTGGC-GAGATCTGACCCAT-GTAGTCTTTGGGTCGGTCAACAGAAATTATTAAGCACCTGCCAGGCCCAGATGAGC-AGACTCAGGAGAAGCACAGGGCACACCGGGC--CAGGTGCA--------AGGTC-CCTCCAGGGA-CCCTGTGTCTGTCTTG-CCCTTGTTCATG-TCCTCTCCAGCCATTCTATCCACTTGAGTTTGTGTCCTGTCTGCCCATG-TCTGTCC--CCAAATCCTGCTCTGATGAGCCTTTGTCTTGGTGCTCTGTCTCTGTGTGTCCTCAGCTTGTGGGTGTGGGTTGCAGTAGGTGGACACTGGAGGTTTCCATCCTAGG--AGATACACTGCTCT-CCCATGGGTCTCAGGGAGCAGAACTGAGCCTGGGAGGGCTGAGCTAGGAGTTTAGTAGCTGGAGGAAGCTGGACTCTCAG-CCTCATGATG--CAGAGCCTA i otoGar3.GL873611 C 0 C 0 a score=97202.000000 s hg38.chr3_KI270784v1_alt 97344 20 + 184404 GGCCTTGTCTCAG-CTCAGTG- s panTro5.chr10 9648 20 + 135926727 GGCCTTGTCTCAGCCTCAGT-- i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 1789 20 + 508821 GGCCTTGTCTCAG-CTCAGTG- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 95353 19 + 85365473 GGCCTTGTCTCAG-CTCAGT-- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33936182 18 + 185818997 -GCCTTCTCTCAG-CTCCGT-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33552121 18 + 192294377 -GCCTTCTCTCAG-CTCCGT-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4313474 18 - 9440265 -GCCTTCTCTCAG-CTCCGT-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16903169 18 - 21915920 -GCCTTCTCTCAG-CTCCGT-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 42798 18 - 21531802 -GCCTTCTCTCAG-CTCCGT-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 66984 18 - 2515279 -GCCTTCTCTCAG-CTCCGT-- i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146588536 18 - 204313951 -GGCCTGTCTCAG-CTCAGT-- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 434383 18 - 2125214 -GGCCTGTCTCAG-CTCAGT-- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 48200 18 + 376347 -GGCCTGTCTCAG-CTCAGT-- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2168113 20 - 8137123 AGCCTTACCTCAG-TTCAAT-T i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 223133 18 + 6586416 I a score=2973104.000000 s hg38.chr3_KI270784v1_alt 97364 456 + 184404 GGGGAAGCCCCTTGACGACTCTAGGCAGG-GGGGATTGTACCG-CTGCCTCTC---------------CCAGTAG-CAG-CTCCCAGGAGGCAG-TGCAGTCACGGG-GCCCCGC-TG-GTAGAAG-CTGAATAGTCCATCGGGAAAACCTC--AAAGGC---------CA-CCAGT--CCTCGAGGTAGCTGCTG--CTCCAGCT-GTGCTCACCTGGAGTGGAGG--GGCAAATGGCACCAGGGGTGGGAGAGGTCAAGGCAGAGCCTCTGCCCCATCCTAGACCAGCTGCACGAGACGACAGCTCACACCAGCTGCCCAGAG-GCACAGCCCCTCTGCCAGGCTTCAGCAGGGCATGGCTTGATCTCAAGGCCCTCT-CTTCCCGTCCCACTGCCCCTCCCTCCTGTGACAGGAGGACCAGCA-GTTCCACTCTGAGC--CCGGCTGAGGCCCGACCTCCTCCACCTCAGCCCTGAGAATCTTCTCCAGCTGGGATG------------------------Gctg s panTro5.chr10 9668 462 + 135926727 GGGAAAG--CCTTGTCGACTC-AGGCA-G-GGGGATTG-ACCGCCTGCCTCTC---------------CCAGTAGCCAG---CCCAGGAGCAAGTTGCAGTCACGCGTGCCCCGCGTGAGTAGAAGCCTGAAAAGTC--TCGGGAAAACCTCAAAAAGGC---------CA-CCAAT--CCTCGAGGTAGCTGCTGCCCTCCAGCTCGTGCTCACCTGGAGTGGA-G--GGCAAATGGCACCAGCGGTGGGAGAGGTCAGGCCAGAGCCTCTG-CCCATCCTAGA-CAGCTGCACGAGACGACAGCTCACA-CAG-TGC---GAGAGCACAG-CCCTCTGCCAGGCTTCAGGCAGGCACGGCTTGATCTCAAGG-CCTCT-CTTTCCCTCCCACCTCCCCTCC--TCTGTGACAG--GGGCCAGCAGGCTCCACTCTGAGCCGCCGGCTGAGGCCCG-CCT-CTCCACCTCAGCCCTGAGAATCTTCTCCAGCTGGGAGG---------CTGTAGCCTGCTTGCCCTG i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 1809 480 + 508821 GGGGAAGCCCCTTGTCGACTCTAGGCAGG-GGGGATTGTACCG-CTGCCTCTC---------------CCAGTAG-CAG-CTCCCAGGAGGCAG-TGCAGTCACGGG-GCCCCGC-TG-GTAGAAGCCTGAAAAGTCCATCGGGAAAACCTC--AAAGGC---------CA-CCAGT--CCTCGAGGTAGCTGCTG--CTCCAGCT-GTGCTCACCTGGAGTGGAGG--GGCAAACGGCACCAGGGGTGGGAGAGGTCAAGGCAGAGCCTCTG-CCCATCCTAGACCAGCTGCACGAGACGACAGCTCACACCAGCTGCCCAGAG-GCACAGCCCCTCTGCCAGGCTTCAGCAGGGCACGGCTTGATCTCAAGGCCCTCT-CTTCCCGTCCCACCGCCCCTCCCTCCTGTGACAGGAGGACCAGCA-GGTCCACTCTGAGC--CCGGCTGAGGCCCGACCTCCTCCACCTCAGCCCTGAGAATCTTCTCCAGCTGGGATGGctgttgccctgttgtcctgttgccctg i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 95372 458 + 85365473 GGGGAGGCCCCTTGCTGACTCTAGGCAGG-GGGGACTGTACCG-CTGCCTCTC---------------CCAGCAG-CAGGCTCCCAGGAGGCAG-TGCAGTCACGGG-GCCCCGC-TG-GCAGAAGCCTGAAAAGTCCATCGGGAAAACCTC--AAAGGC---------CA-CCAGT--CCTCCAGGTAGCTGCTG--CTCCAGCT-GTGCTCACCTGGAGTGGAGG--GGCAAACGACACCAGGGGTGGGAGAGGTCAAGGCAGAGCCTCTGCCCCATTCTAGACCAGCTGCACGAGACGACAGCTCACACCAGCTGCTCAGAG-GCACAGCCCCTCTGCCAGGCTTCAGCAGGCCACAGCTTGACCTCAAGGCCCTCT-CTTCCCATCCCACCGCCCCTCCCTTCTGTGACAGGAGGACCAGCA-GGTCCACTCTGAGC--CCAGCTGAGGCCCGACCTCCTCCACCTCAGCCCTGAGAATCTTCTCCAGCTGGGATG------------------------Gctg i nomLeu3.chr20 C 0 I 264 s rheMac8.chr3 33936200 455 + 185818997 GGGGAAGCCCCTTGTCGACTCTAGGCAGG-GGGGATCGTTCCA-CTGCCTCTC---------------CCAGCAG-CAGGCTCCCAGGAGGCAG-TGCCGTCACGGG-GCCCCGC-TG-GCAGAAGCCTGAAAAGTCCATCAGGGAAACCTC--CAAGGTAGTGTCTAACA-CCAGT--CCTCGAGGCAGCTGCTG--CTCCAGCT-GTGCTCACCTGGAGTGGAGG--CGCAAACGGCACCCAGTGTGGGAGAGGTCGAGGCAGAGCCTCTGCCCCATCCTAGACCAACTGCATGAGACAACAGCTCACATCAGCTGCCCAGAG-GCATGGCCCCCCTGCCAGGCTTTAGCAGGTCTCTGCTTGCTCTCAAGACCCTCT-CTTCCCATCTCAG-GGCCCTCCCTTCTGTGACAGGAGGACTAGCA-GGTGTGCTCTGAGC--CTGGCTGAGGCCCGACCTCCTCCACCTCAACCCTGAGAATCTTCTCCAGC----------------------------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33552139 455 + 192294377 GGGGAAGCCCCTTGTCGACTCTAGGCAGG-GGGGATCGTTCCA-CTGCCTCTC---------------CCAGCAG-CAGGCTCCCAGGAGGCAG-TGCCGTCATGGG-GCCCCGC-TG-GCAGAAGCCTGAAAAGTCCATCAGGGAAACCTC--CAAGGTAGTGTCTAACA-CCAGT--CCTCGAGGCAGCTGCTG--CTCCAGCT-GTGCTCACCTGGAGTGGAGG--CGCAAACGGCACCCAGTGTGGGAGAGGTCGAGGCAGAGCCTCTGCCCCATCCTAGACCAGCTGCATGAGACAACAGCTCACATCAGCTGCCCAGAG-GCATGGCCCCCCTGCCAGGCTTTAGCAGGTCTCTGCTTGCTCTCAAGACCCTCT-CTTCCCATCTCAG-GGCCCTCCCTTCTGTGACAGGAGGACTAGCA-GGTGTGCTCTGAGC--CTGGCTGAGGCCCGACCTCCTCCACCTCAACCCTGAGAATCTTCTCCAGC----------------------------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4313492 455 - 9440265 GGGGAAGCCCCTTGTCGACTCTAGGCAGG-GGGGATCGTTCCA-CTGCCTCTC---------------CCAGCAG-CAGGCTCCCAGGAGGCAG-TGCCGTCACGGG-GCCCCGC-TG-GCAGAAGCCTGAAAAGTCCATCAGGGAAACCTC--CAAGGTAGTGTCTAACA-CCAGT--CCTCGAGGCAGCTGCTG--CTCCAGCT-GTGCTCACCTGGAGTGGAGG--CGCAAACGGCATCCAGTGTGGGAGAGGTCGAGGCAGAGCCTCTGCCCCATCCTAGACCAGCTGCATGAGACAACAGCTCACATCAGCTGCCCAGAG-GCATGGCCCCCCTGCCAGGCTTTAGCAGGTCTCTGCTTGCTCTCAAGACCCTCT-CTTCCCATCTCAG-GGCCCTCCCTTCTGTGACAGGAGGACTAGCA-GGTGTGCTCTGAGC--CTGGCTGAGGCCCGACCTCCTCCACCTCAACCCTGAGAATCTTCTCCAGC----------------------------------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16903187 455 - 21915920 GGGGAAGCCCCTTGTCGACTCTAGGCAGG-GGGGATCGTTCCA-CTGCCTCTC---------------CCAGCAG-CAGGCTCCCAGGAGGCAG-CGCCGTCACGGG-GCCCCGC-TG-GCAGAAGCCTGAAAAGTCCATCAGGGAAACCTC--CAAGATAGTGTCTAACA-CCAGT--CCTCGAGGCAGCTGCTG--CTCCAGCT-GTGCTCACCTGGAGTGGAGG--CGCGAATGGCACCCAGTGTGGGAGAGGTCGAGGCAGAGCCTCTGCCCCATCCTAGACCAGCTGCATGAGACAACAGCTCACATCAGCTGCCCAGAG-GCATGGCCCCCCTGCCAGGCTTTAGTAGGTCTCTGCTTGCTCTCAAGACCCTCT-CTTCCCATCTCAG-GGCCCTCCCTTCTGTGACAGGAGGACTAGCA-GGTGTGCTCTGAGC--CTGGCTGAGGCCCGACCTCCTCCACCTTAACCCTGAGAATCTTCTCCAGC----------------------------------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 42816 455 - 21531802 GGGGAAGCCCCTTGTTGACTCTAGGCAGG-GGGGATCGTTCCG-CTGCCTCTC---------------CCAGCAG-CAGGCTCCCAGGAAGCAG-TGCCATCACGGG-GCCCCGC-TG-GCAGAAGCCTGAAAAGTCCATCAGGGAAACCTC--CAAGGTAGTGTCTAACA-CCAGT--CCTCGAGGCAGCTGCTG--CTCCAGCT-GTGCTCACCTGGAGTGGCGG--CGCGAACGGCACCCAGTGTAGGAGAGGTCGAGGCAGAGCCTCTGCCCCATCCTAGACCAGCTGCATGAGACAACAGCTCACACCAGCTGCCCAGAG-GCATGGCCCCCCTGCCAGGCTTTAGCAGGTCTCCGCTTGCTCTCAAGACCCTCT-CTTCCCATCTCAG-GGCCCTCCCTTCTGTGACAGGAGGACCAGCA-GGTGTGCTCTGAGC--CCGGCTGAGGCCCAACCTCCTCCACCTCAAACCTGAGAATCTTCTCCAGC----------------------------------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 67002 455 - 2515279 GGGGAAGCCCCTTGTCGACTCTAGGCAGG-GGGGATCATTCCA-CTGCCTCTC---------------CCAGCAG-CAGGCTCCCAGGAGGCAG-TGCCGTCACGGG-GCCCCGC-TG-GCAGAAGCCTGAAAAGTCCATCAGGGAAACCTC--CAAGGTAGTGTCTAACA-CCCGT--CCTCGAGGCAGCTGCTG--CTCCAGCT-GTGCTCACCTGGAGTGGAGG--CGCGAATGGCACCCAGTGTGGGAGAGGTCGAGGCAGAGCCTCTGCCCCATCCTAGACCAGCTGCATGAGACAACAGCTCACGCCAGCTGCCCAGAG-GCATGGCCCCCCTGCCAGGCTTTAGCAGGTCTCCGCTTGCTCTCAAGACCCTCT-CTTCCCATCTCAG-GGCCCTCCCTTCTGTGACAGGAGGACCAGCA-GGTGTGCTCTGAGC--CCGGCTGAGGCCCGACCTCCTCCACCTCAACCCTGAGAATCTTCTCCAGC----------------------------------- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 223151 428 + 6586416 GGGGAAGCCCCTTGTTGACTCTAGGCAGG-GGGGAGGGTACCG-CCGCCTCTC---------------CCAGCAG-CAGGCTCCCAGGAGGCAG-TGCCGTCACGGG-GCCCCGC-TG-GCAGAAGCCTGAAAAGTCCATCAGGGAAACCTC--CAAGGTAATGTCTAACA-CCAGT--CCTCGAGGCAGCTGCTG--CTCCAGCT-GTGCTCACCTGGAGTGGAGG--CGCCAACGGCACCTGGTGTGGGAGAGGTCGAGGCCGAGCCTCTGCCCCATCCTAGACCGGCTGCACGAGACAACAGCTCACATCAGCTGCCCAGAG-GCACGGCTCCCC-ACCAGCCTTCAGCAGGCCT-----------------CCTCT-CTTCCCATCCCAGCACCCCTCCCCTCTGTGACAGGAGGACCAGCA-GGTGCGCT------------CTGAGGCCCGACCTCCTCCACCTCAACCCTGAGAACCTTCTCCAGC----------------------------------- i colAng1.NW_012117710v1 I 18 C 0 s calJac3.chr2 146588554 456 - 204313951 GGGGAAGCCCCTCGTTGACTCTGGGCAGGCAGGGATTGTACCA-CTGCCTTTC---------------CCAGCAG-CATGCTCCCAGGAAGCAG-TGCAGTCACGGG-GCCTTGC-TA-GGAAAAGCCTGAAAAGTTCATCAGGGAGATCTC--AAAGGCAGTGTCTAATG-CCAGT--CCTCAAGGCAGCTGCTG--CTCCAGCT-GGGC-CACTGGG---TGAGA--AGTGAGTGGCATCAGGTATGGGAGTGGTCGAGTCCGAGCCTCTGGCCCATCCTAGACCA---GCATGAGACAACAGCTTACACCAGCTGCCCAGAG-GCACAGCTCCTCTGTCAGGCTTCAGCAGGCCATGGCTTGACCTCAAAGCCCTCTCCTCCCCAGCCTG------CTCCCTTCTGTGACAGAAGGACCAGCA-GGTCTGCTCCCAGC--CTGGCTGAGGCCTGACCTCCCCCACCTCTACCCTGAGAATCTTCACCAGCTGGGATGGCTG------------------------ i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 434401 468 - 2125214 AGGGAAGCCCCTCGTTGACCCTGGGCAGGCAGGGATTGTACCA-CTGCCTTTC---------------CCAGCAG-CAGGCTCCCAGGAAGCAG-TGCAGTCATGGT-GCCCTGC-TG-GGAGAAGCCTGAAAAATCCATCAGGGAGACCTC--AAAGGCAGTGTCTAATG-CCAGT--CCTCAAGGCAGCTGCTT--CTCCAGCT-AGGC-CACCAGGAGAGGAGG--AGCGAGTGGCATCAGGTGTGGGAGTGGTCGAGGCCAAGCCTCTGGCCCATCCTAGACCAGCTGCATGAGACAACAGCTCACACCAGCTGCCCAGAG-GCACAGCTCCTCTGCCAGGCTTCAGCAGGCCATGGCTTGATCTCAAAGCCCTCTCCTCCCCAGCCCGCTGCCCCTCCCTTCTGTGACAGGAGGACCAGCA-GGTCTGCTCCCAGC--CCGGCTGAGGCCCGACCTCCCCCATCTCCACCCTGACAATCTTCACCAGCTGGGATGGCTG------------------------ i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 48218 468 + 376347 GGGGAAGCCCCTCGTTGACTCTGGGCAGGCAGGGACTGTAGCA-CTGTCTTTC---------------CCAGCAG-CAGGCTCCCAGGAAGCAG-TGCAGCCACGGG-GCCCCGC-TG-GGAGAAGCCTGAAAAGTCCATCAGGGAGACCTC--AAAGGCAGCGTCCAATG-CCAGC--CCTCAAGGCAGCTGCTG--CTCCAGCT-GGGC-CACCGGGAGAGGTGA--AGCGAGTGGCATCAGGTGTGAGAGTGGTCGAGGCCGAGCCTCTGGCCCATCCTAGACCAGCTGCACGAGACAACAGCTAACACCAGCTGCCCAGAG-GCACAGCTCCTCTGCCAGGCTTCGGCAGGCCACGGCTTGATCTCAAAGCCCTCTCCTCCCCAGCCCGCTGCCCCTCCCTTCCGTGACAGGAGGACCAGCA-GGTCTGCTCCCAGC--CCGGCTGAGGCCCGACGTCCCCCACCTCCACCCTGAGAATCGTCACCAGCTGGCAGGGCTG------------------------ i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2168133 407 - 8137123 GAGGAAGCTCCTGGGTGATTCTGGGGCTG-GAGGAATCTACAG-GGACTTTTCCTGAGCAGCCCCTGGCCAGCTG-CAGCCTCCCAGAATACAG-TGCAGTCCTGTG-GCCCTAC-TC-------------AGAACCCATCAGGAATACCTC--AAAGGCAGAATCTCACAGCTAGTTCCCTAGAGGCACCTGCTT--TTCCAGCTGGGGCTCATCAAGAAAGGAGGAAAGGGAAAGGCACCAGTCGTGGGAGAGGCTGAGACAG-GTTTCTG------------CCAACTGCA----------------------------GAG-GTGCAACCCCTCTGCCGGGCTTTAGTGGGGCGAGGTTTAATCTCAAAGCCCTGT-CCTGACAGTCTGG-TCTCTCCTCATCTGTGAGAGG-TGACCAGCA-GGTCTACTCTGAGC----------------------------TCAGCCCTGAGGATTTTCTTCAGCAAGGCTGGATG------------------------ i otoGar3.GL873611 C 0 C 0 a score=539239.000000 s hg38.chr3_KI270784v1_alt 97820 133 + 184404 ttgccctgttgttctgttg-tcctcttgtcctgt--------tgttctgttgtcTTGCCCTCCCAGCTCCTGACCACACAGGGGCTTTGTTCCCACGCC-AGCCTCTTTGGGGAAAGTGGGGGAGGGGGGC-CCTGCTCCAGGC s panTro5.chr10 10130 126 + 135926727 TTGCCCTGTTGTTCTGGTGTTCCTCTTGTCCTGT----------GTCTGTTGTC-TGCCCT-CCAGCTCCTGACCACACAGGGGCTTTGTT-CCATGCCAAGCCTCTTTGGGGAAAGTGG----GGAGGGC-CCTGCTCCAGGC i panTro5.chr10 C 0 I 54 s gorGor5.CYUI01015884v1 2289 141 + 508821 ttgccctgttgttctgttg-tcctcttgtcctgttgtcctgttgtcctgttgtcTTGCCCTCCCAGCTCCTGACCACACAGGGGCTTTGTTCCCACGCC-AGCCTCCTTGGGGAAAGTGGGGGAGGGGGGC-CCTGCTCCAGGC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 96094 133 + 85365473 ttgtcctgttgtcctgttg-tcctgttgtcctgt--------tgtcctgttgtcctgCCCTCCCAGCTCCTGACCTCACAGGGGCTTTGCTCCCATGCC-AGCCTCTTTGGGGAAAGTTGGGGAGGGGGGC-CCTGCTCCAGGC i nomLeu3.chr20 I 264 C 0 s rheMac8.chr3 33936655 85 + 185818997 -------------------------------------------------------TGCCCTCCCAGCTCCTGACCACACAGGGGCTTTGCTCCCACATC-AGCCTCTTTGGGGAAAGTGCAG--GGAGGGG-CCTGCTTCAGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33552594 85 + 192294377 -------------------------------------------------------TGCCCTCCCAGCTCCTGACCACACAGGGGCTTTGCTCCCACACC-AGCCTCTTTGGGGAAAGTGCAG--GGAGGGG-CCTGCTTCAGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4313947 85 - 9440265 -------------------------------------------------------TGCCCTCCCAGCTCCTGACCACACAGGGGCTTTGCTCCCACACC-AGCCTCTTTGGGGAAAGTGCAG--GGAGGGG-CCTGCTTCAGGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16903642 85 - 21915920 -------------------------------------------------------TGCCCTCCCAGCTCCTGACCATACAGGGGCTTTGCTCCCACACC-AGCCTCTTTGGGGAAAGTGCAG--GGAGGGG-CCTGCTTCAGGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 43271 85 - 21531802 -------------------------------------------------------TGCCCTCCCAGCTCCTGACCACACAGGGGCTTTGCTCCCACACC-AGCCTCTTTGGGGAAAGTGCGG--AGAGGGG-CCTGCTCCAGGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 67457 85 - 2515279 -------------------------------------------------------TGCCCTCCCAGCTCCTGACCACACAGGGGCTTTGCTCCCACACC-AGCCTCTTTGGGGAAAGTGCAG--GGAGGGG-CCTGCTTCAGGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 223579 85 + 6586416 -------------------------------------------------------TGCCCTCCCAGCTCCTGACCACACACGGGCTTTGCTCCCACACC-AGCCTCTTTGGGGAAAGTGTGG--GGAGGGG-CCTGCTCCAGGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146589010 92 - 204313951 -------------------------------------------------TTGCTCTGTCCTCCCAGCTCCTGACCACACTGGGTCTTTGCTCCCATGCC-AATCTCTTTGGGAAAAGTGGGA--AGAGAATCCCTGCTCCAGGC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 434869 92 - 2125214 -------------------------------------------------TTGCTCTGGCCTCCCAGCTCCTGACCACACTGGGGCTTTGCTCCCACACC-AGTCTCTTTGGGAAAAGTAGGA--AGAGGGACCCTGCTCCAGGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 48686 91 + 376347 -------------------------------------------------TTGCTATGTCCTCCCAGCTCCTGACCACACTGGGGCTTTCCCCCCATGCC-AGTCTCTTTGGGAAAAGTGGGA--AGAGGGA-CCTGCTCCAGGG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2168540 79 - 8137123 ------------------------------------------------------CTGCCCT--------CTGATCACATA-GAGCTTTGCTCCCAGGCC-AGTCTCTTTAGGGGAAGAGGGAAGGCAGGGC-TCTGATCCAGGA i otoGar3.GL873611 C 0 C 0 a score=81880.000000 s hg38.chr3_KI270784v1_alt 97953 19 + 184404 TCTGGGACATT-------------------------------------------TGTCTTGG s gorGor5.CYUI01015884v1 2430 19 + 508821 TCTGGGACATT-------------------------------------------TGGCTTGG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 96227 19 + 85365473 TCTGGGACCTT-------------------------------------------TGGCTTGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33936740 19 + 185818997 TCTGGGACATG-------------------------------------------TGGCTTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33552679 19 + 192294377 TCTGGGACATG-------------------------------------------TGGCTTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4314032 19 - 9440265 TCTGGGACATG-------------------------------------------TGGCTTGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16903727 19 - 21915920 TCTGGGACATG-------------------------------------------TGGCTTGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 43356 19 - 21531802 TCTGGGACATG-------------------------------------------TGGCTTGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 67542 19 - 2515279 TCTGGGACATG-------------------------------------------TGGCTTGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 223664 62 + 6586416 TCTGGGACATGTGGGGAAAGTGGGGGAGGGGCCTGCTCCAGGCTCTGGGACATTTGGCTTCG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146589102 19 - 204313951 TGTGGGACATT-------------------------------------------TGGCTTGG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 434961 19 - 2125214 TGTGGGACATT-------------------------------------------TGGCTTGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 48777 19 + 376347 TGTGGGACTTT-------------------------------------------TGGCTTGG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2168619 4 - 8137123 TCTA---------------------------------------------------------- i otoGar3.GL873611 C 0 C 0 e panTro5.chr10 10256 54 + 135926727 I a score=463197.000000 s hg38.chr3_KI270784v1_alt 97972 102 + 184404 GCTGTAGCCTGTGACCAAGGAGAAGAAACCCTGAAGGTGGG-TTCCCA-CCAGATGTGGGCATGGTCAGCTACATCAGGcccccaaaggtgtgcacatcctaat s panTro5.chr10 10310 94 + 135926727 GCTGTAGCCTGTGTCCAAGGAGAAGATAACCTGAAGGTGGGCTTCCCACCCAGATG-GTGCAT-GTCAGCTACATCAG--ccccaaa-gtgt---catccta-- i panTro5.chr10 I 54 C 0 s gorGor5.CYUI01015884v1 2449 102 + 508821 GCTGTAGCCTGTGTCCAAGGAGAAGAAACCCTGAAGGTGGG-TTCCCA-CCAGATGTGGGCATGGTCAGCTACATCAGGcccccaaaggtgtgcacatcctaat i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 96246 102 + 85365473 GCTGTAACCTGCATCCAAGGAGAAGAAACACTGAAGGTGGG-CTCCCA-CCAGATGTGGGCACggtcagcaacatcaggcccccaaaggtgtgcacatcctagt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33936759 67 + 185818997 GCCGTAGCCTGTGTCCAAGGAGAAGAAACCCTGAAGGTGGG-TTCCCA-CCAG-----------------------------------GTGTGCACACCCTAAT i rheMac8.chr3 C 0 I 11 s macFas5.chr3 33552698 67 + 192294377 GCCGTAGCCTGTGTCCAAGGAGAAGAAACCCTGAAGGTGGG-TTCCCA-CCag-----------------------------------gtgtgcacaccctaat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4314051 67 - 9440265 GCCGTAGCCTGTGTCCAAGGAGAAGAAACCCTGAAGGTGGG-TTCCCA-CCAG-----------------------------------GTGTGCACACCCTAAT i macNem1.NW_012019910v1 C 0 I 11 s cerAty1.NW_012002954v1 16903746 67 - 21915920 GCCGTAGCCTGTGTCCAAGGAGAAGAAACCCTGAAGGTGGG-TTCCCA-CCAG-----------------------------------GTGTGCACACCCTAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 43375 67 - 21531802 GCCGTAGCCTGTGTCCAAGGAGAAGAAACCCTGAAGGTGGG-TTCCCA-CCag-----------------------------------gtgtgcacaccctaat i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 67561 67 - 2515279 GCCGTAGCCTGTGTCCAAGGAGAAGAAACCCTGAAGGTGGG-TTCCCA-CCAG-----------------------------------GTGTGCACACCCTAAT i manLeu1.NW_012101810v1 C 0 I 11 s colAng1.NW_012117710v1 223726 66 + 6586416 GCTGTAGCCTGTGTCCAAGG-GAAGAAACCCTGAAGGTGGG-TTCCCA-CCAG-----------------------------------GTGTGCACACCCTAAT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146589121 102 - 204313951 GTGGTAGCCTGTGTCCAAGGAGAAGAAGCCCTGAAGATGGG-TTCCCA-CCAGACATGGGCATGGTCAGCTACATCAGGTccccaaaggtatgcacttcctaat i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 434980 102 - 2125214 GCTGTAGCCTGTGTCCAAGGAGAAGAAACCCTGAAGATGGA-TTCCCA-CCAGACATGGGCATGGTCAGCTACATCAGGcccccaaaggtgtgcacggcctaat i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 48796 101 + 376347 GCTGTGGCCTGTGTCCAAGGAG-AGAAACCCTGAAGATGGG-CTCCCA-CCAGACGTGGGCATGGTCAGCTCCGTCAGGcccccaaaggtgtgcacgtcctaat i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2168623 71 - 8137123 -------------------------------TAAATGTGAG-ATCCCA-TCAGATGTGGGTATGGTCACCCTaacaagggtccccaaagggtatagatcctaat i otoGar3.GL873611 C 0 C 0 a score=32258.000000 s hg38.chr3_KI270784v1_alt 98074 13 + 184404 cccacgaacccgt s panTro5.chr10 10404 13 + 135926727 tccacgaacccgt i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 2551 13 + 508821 cccacgaacccgt i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 96348 13 + 85365473 cccacgaacccgc i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33552765 11 + 192294377 -ccatgcccctg- i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 16903813 11 - 21915920 -CCACGCCCCTG- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 43442 11 - 21531802 -ccacgcccccg- i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 223792 11 + 6586416 -CCACGCCCCCG- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146589223 13 - 204313951 cccaagaacctgt i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 435082 13 - 2125214 cccaagaacctgt i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 48897 13 + 376347 cccaggaacctgt i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2168694 13 - 8137123 cccaagaacccat i otoGar3.GL873611 C 0 C 0 e rheMac8.chr3 33936826 11 + 185818997 I e manLeu1.NW_012101810v1 67628 11 - 2515279 I e macNem1.NW_012019910v1 4314118 11 - 9440265 I a score=106456.000000 s hg38.chr3_KI270784v1_alt 98087 16 + 184404 gggcacgttaccttac s panTro5.chr10 10417 15 + 135926727 -ggcacgttaccttac i panTro5.chr10 C 0 I 27 s gorGor5.CYUI01015884v1 2564 16 + 508821 gggcacgttaccttac i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 96361 16 + 85365473 gggtatgttaccttac i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33936837 16 + 185818997 GGGTACGTTGCCTTCC i rheMac8.chr3 I 11 C 0 s macFas5.chr3 33552776 16 + 192294377 gggtacgttgccttcc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4314129 16 - 9440265 GGGTACGTTGCCTTCC i macNem1.NW_012019910v1 I 11 C 0 s cerAty1.NW_012002954v1 16903824 16 - 21915920 GGGTACGTTGCCTTCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 43453 16 - 21531802 gggtacgttgccttcc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 67639 16 - 2515279 GGGTACGTTGCCTTCC i manLeu1.NW_012101810v1 I 11 C 0 s colAng1.NW_012117710v1 223803 16 + 6586416 GGGTACATTGCCTTCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146589236 16 - 204313951 gggtatgtcaccttac i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 435095 16 - 2125214 gggtatggtaccttac i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 48910 16 + 376347 aggtgtattaccttac i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2168707 15 - 8137123 -aagctattaccttac i otoGar3.GL873611 C 0 C 0 a score=187882.000000 s hg38.chr3_KI270784v1_alt 98103 32 + 184404 atgcaacaggcactctatggatggagtcggga s gorGor5.CYUI01015884v1 2580 32 + 508821 atgcaacaggcactctatggatggagttggga i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 96377 32 + 85365473 atgcaagaggggctctgtggatggagtcggga i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33936853 32 + 185818997 AAGCAAGAGGCGCTCTGTGGACGGAGTCGGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33552792 32 + 192294377 aagcaagaggcgctctgtggacggagtcggga i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4314145 32 - 9440265 AAGCAAGAGGCGCTGTGTGGACGGAGTCGGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16903840 32 - 21915920 AAGCAAGAGGCGCTCTGTGGACGGAGTCGGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 43469 32 - 21531802 aagcaagaggcgctctgtggacggagtcggga i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 67655 32 - 2515279 AAGCAAGAGGCGCTCTGTGGACAGAGTCGGGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 223819 32 + 6586416 AAGCAAGAGGCGCTCTGTGGACAGAGTCGGGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146589252 32 - 204313951 acgcaagaggcgttctgtggatgtagttagga i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 435111 32 - 2125214 atgcaagaggcattctgtggatgtagttagga i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 48926 23 + 376347 acgcaggaggcactct---------gttagga i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2168722 32 - 8137123 atgcaagaggtattttgtagaggtggttaaga i otoGar3.GL873611 C 0 C 0 e panTro5.chr10 10432 27 + 135926727 I a score=147307.000000 s hg38.chr3_KI270784v1_alt 98135 22 + 184404 taagtgtctagagattgggagg s panTro5.chr10 10459 20 + 135926727 taagtgtctagagat--ggagg i panTro5.chr10 I 27 C 0 s gorGor5.CYUI01015884v1 2612 22 + 508821 taagtgtctagagattaggagg i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 96409 22 + 85365473 taagtgtctagagattgggagg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33936885 22 + 185818997 CAGATGTCTAGAGATTAGGAGG i rheMac8.chr3 C 0 I 10 s macFas5.chr3 33552824 22 + 192294377 caaatgtctagagattaggagg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4314177 22 - 9440265 CAAATGTCTAGAGATTAGGAGG i macNem1.NW_012019910v1 C 0 I 10 s cerAty1.NW_012002954v1 16903872 22 - 21915920 CAAATGTCTAGAGATTAGGAGG i cerAty1.NW_012002954v1 C 0 I 10 s chlSab2.chr28 43501 21 - 21531802 caagtgtctagagattaggag- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 67687 22 - 2515279 CAAATGTCTAGAGATTAGGAGG i manLeu1.NW_012101810v1 C 0 I 10 s colAng1.NW_012117710v1 223851 22 + 6586416 CAAGTGTCTAGAGATTAGGAGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146589284 22 - 204313951 taagtgtcaagaggtagggagg i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 435143 22 - 2125214 taagtgtcgagaggcagggagg i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 48949 22 + 376347 taagtgtcgagaggcagggagg i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2168754 22 - 8137123 taagtatcttgaaatggagaga i otoGar3.GL873611 C 0 C 0 a score=-13213.000000 s hg38.chr3_KI270784v1_alt 98157 31 + 184404 ttgttctgggtcatccagac-gacttatgaga s panTro5.chr10 10479 31 + 135926727 tttgttcgggtc-tccagatagacttaTGAGA i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 2634 31 + 508821 ttgttctgggtcatccagac-gacttatgaga i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 96431 15 + 85365473 ttgtgct------tccggtt-g---------- i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33552846 10 + 192294377 -tgctcgggct--------------------- i macFas5.chr3 C 0 C 0 s chlSab2.chr28 43522 11 - 21531802 ttgctcggggt--------------------- i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 223873 5 + 6586416 -TGCTC-------------------------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146589306 20 - 204313951 ttgttcctgatgatctgggt------------ i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 435165 20 - 2125214 ttgttcctgatgatctgggt------------ i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 48971 20 + 376347 ttgtacctgatcatctgggt------------ i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2168776 20 - 8137123 ttattctgggttgtctgggt------------ i otoGar3.GL873611 C 0 C 0 e cerAty1.NW_012002954v1 16903894 10 - 21915920 I e rheMac8.chr3 33936907 10 + 185818997 I e manLeu1.NW_012101810v1 67709 10 - 2515279 I e macNem1.NW_012019910v1 4314199 10 - 9440265 I a score=1973901.000000 s hg38.chr3_KI270784v1_alt 98188 301 + 184404 gggcccttatgagag-ggaggcagcaagctcacagagagggccatggaac--aacagcagctcagacacagcagagg------------ctgc------acagctgtc----------------------------------------------------------------------------------------------------ctgggt--------------------------------gccaagtagctgcagaggtcagag-------------------gaggtgcagagcaggtgtt---ctg-c-----------------------------------------------agcctccag-agggaccagccctgctgactccctggctttggctcagtg-aaactcatttcggacttct-gacctccagctctgcaagagaaggaatctgtgctattttaaaccactaaatttgtggtttctg-ttcagcagcagtgggagaGGGCGAAATGCTC s panTro5.chr10 10510 312 + 135926727 -GGCCCTTATGAGAG-GGA-GCAGCAAGCTCACAGAGAGGGCCATGGAACAAAACAGCCGCTCAGACACAGCAGgggggaaggcgggccccgcgccaaaacagctgtc----------------------------------------------------------------------------------------------------ctgggt--------------------------------gcccagtag-tgcagaggtcggag-------------------gaggtgca-agcatggttt---ctgcc-----------------------------------------------agcctccagcaggggacagcccgcctgactccct-gctttgg-tcagtgaaaactc--ttcggacttctggacctccagctcta-aagagaagaaatctgtgctattttaaa-cactaaa-ttgtgg-ttctg-ttcagcagcaGGGCGAGA-GGCGAAATGCTC i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 2665 301 + 508821 gggcccttatgagag-ggaggcagcaagctcacagagagggccatggaac--aacagcagctcagacacaacagagg------------ccgc------acagctgtc----------------------------------------------------------------------------------------------------ctaggt--------------------------------gccgagtagctgcagaggtcggag-------------------gaggtgcagagcaggtgtt---ctg-c-----------------------------------------------agcctccag-agggaccagccccgctgactccctggctttggctcagtg-aaactcatttcggacttct-gacctccagctctgcaagagaagaaatctgtgctattttaaaccactaaatttgtggtttctg-ttcagcagcagtgggagaGGGTGAAATGCTC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr20 96446 296 + 85365473 -ggcccttatgagag-ggaggcagcaagctcaCCAAGC--ACCATGG-----AACAGCAGCTCAGACACGGCAGAGG------------CCGC------GCAGCTGTC----------------------------------------------------------------------------------------------------CTGTGT--------------------------------GCCGAGCAGCTGcagaggtcggag-------------------ggggtgcagagcaggtgtt---ctg-c-----------------------------------------------agcctccag-agggaccaaccctgctgactccctggctttggctcagtg-aaactcatttcggacttct-caccttcagcactacaagagaagaaatctgtgctattttaaaccactacatttgtggtttctgtttcagcagcagtgggagaGGGCAAACTGCTC i nomLeu3.chr20 C 0 n 0 s rheMac8.chr3 33936917 300 + 185818997 GGGCCCGTATGAGAG-GGAGGCAGCAAGCTCA--GAGAGGGCCATGGGAC--AACAGCAGCTCAGAC--AGCAGAGG------------CCGT------GTAGCTGTC----------------------------------------------------------------------------------------------------CTGGGT--------------------------------GCcgagcagctgcagaggccggcg-------------------gaggcacggagcaggtgttctcctg-c-----------------------------------------------agcctccag-tgggaccagccctgccgacaccctggctttggcccagtg-aaactcatttcggacttct-gacctccagcaccacaagagaagaaatctgtgctggtttgaaccactaaattagtggtatctgtttcagcagcagtgggagaGGGC-AAATGCTC i rheMac8.chr3 I 10 C 0 s macFas5.chr3 33552856 300 + 192294377 gggcccgtatgagag-ggaggcagcaagctca--gagagggccatgggac--aacagcagctcagac--agcagagg------------ccgt------gtagctgtc----------------------------------------------------------------------------------------------------ctgggt--------------------------------gccgagcagctgcagaggccggcg-------------------gaggcacggagcaggtgttctcctg-c-----------------------------------------------agcctccag-tgggaccagccctgccgacaccctggctttggcccagtg-aaactcatttcggacttct-gacctccagcaccacaagagaagaaatctgtgctggtttgaaccactaaattagtggtatctgtttcagcagcagtgggagaGGGC-AAATGCTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4314209 300 - 9440265 GGGCCCGTATGAGAG-GGAGGCAGCAAGCTCA--GAGAGGGCCATGGGAC--AACAGCAGCTCAGAC--AGCAGAGG------------CCGT------GTAGCTGTC----------------------------------------------------------------------------------------------------CTGGGT--------------------------------GCcgagcagctgcagaggccggcg-------------------gaggcacggagcaggtgttctcctg-c-----------------------------------------------agcctccag-tgggaccagccctgctgacaccctggctttggcccagtg-aaactcatttcggacttct-gacctccagcaccacaagagaagaaatctgtgctggtttgaaccactaaattagtgttatctgtttcagcagcagtgggagaGGGC-AAATGCTC i macNem1.NW_012019910v1 I 10 C 0 s cerAty1.NW_012002954v1 16903904 300 - 21915920 GGGCCCGTATGAGAG-GGAGGCAGCAAGCTCA--GAGAGGGCCATGGGAC--AACAGCAGCTCAGAC--AGCAGAGG------------CCGT------GTAGCTGTC----------------------------------------------------------------------------------------------------CTGGGT--------------------------------GCcgagcagctgcagaggccggcg-------------------gaggcacggagcaggtgttctcctg-c-----------------------------------------------agccttcag-tgggaccagccctgccaacaccctggctttggcccagtg-aaactcatttcggacttct-gacctccagcaccacaagagaagaaatctgtgctggtttaaaccactaaattagtggtatctgtttcagcagcagtgggagaGGGC-AAATGCTC i cerAty1.NW_012002954v1 I 10 C 0 s chlSab2.chr28 43533 301 - 21531802 gggcccgtatgagag-ggaggcagcaagttca--gaga-ggccacgggac--aacagcagctcagacaaagcagagg------------aagt------gcagctgtc----------------------------------------------------------------------------------------------------ctgggt--------------------------------gccgagcagctgcagaggccggca-------------------gaggcacagagcaggtgttttcctg-c-----------------------------------------------agcctccag-agggaccagccctgccggcaccctggctttggcccagtg-aaactcatttcggacttct-gacctccagcatcacaagagaagaaatctgtgccagtttaaaccactaaatttgtggcatctgtttcagcagcagtgggagaGGGC-AAATGCTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 67719 300 - 2515279 GGGCCCGTATGAGAG-GGAGGCAGCAAGCTCA--GAGAGGGCCATGGGAC--AACAGCAGCTCAGAC--AGCAGAGG------------CCGT------GTAGCTGTC----------------------------------------------------------------------------------------------------CTGGGT--------------------------------GCcgagcagctgcagaggccggtg-------------------gaggcacggagcaggtgttctcctg-c-----------------------------------------------agtctccag-tgggaccagccctgccgacatcctggctttggcccagtg-aaacttatttcggacttct-gacctccagcaccacaagagaagaaatctgtgctggtttaaaccactaaattagtggtatctgtttcagcagcagtgggagaGGGC-AAATGCTC i manLeu1.NW_012101810v1 I 10 C 0 s colAng1.NW_012117710v1 223878 301 + 6586416 GGGCCCGTATGAGAG-GGAGGCAGCAAGTTCA--GAGA-GGCCATGGGAC--AACAGCAGCTCAGACAGAGCAGAGG------------CCGT------GCAGCTGTC----------------------------------------------------------------------------------------------------CTGGGT--------------------------------GCTgagcagctgcagaggccggcg-------------------gaggcatggagcaggtgttctcctg-c-----------------------------------------------agcctccag-agggaccagccctgctgacgccctggctttggcccagtg-aaactcattttggacttct-gacctccagcaccacaagagaagaaatctgcgctggtttaaaccactgaatttgtggtaactgtttcagcagcagtgggagaGGGC-AAATGCTC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146589326 305 - 204313951 gggtccaTATGAGAG-AGAGGCAACAAGCTCACAGGGAGGGCAATGGGGC--AACAGCAGCTCAGACAGAGCAGAGG------------CCGC------ACAGCTGGC----------------------------------------------------------------------------------------------------CTGGGT--------------------------------GCCAAGCAGCTGTAGAGGCCAGAG-------------------GCGGTGCAGAGCATGTGTtttccta-g-----------------------------------------------agcctccag-aggcatcagccctgctgactacctggatttggcccagtg-aaactcattttgggcttct-gacctccagcactgcaagagaagaaatctgtgctattttaaaccactaggcttgtggtatctgtttcagcagtagtgggagaGGGCAAAATGCTC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 435185 305 - 2125214 gggTTTGTATGAGAA-GGGGGCAGCAAGCTCACAGGGAGGGCAATGGGAC--AACAGCAGCTCAGACAGAGCAGAGG------------CAGC------ACAGCTGGC----------------------------------------------------------------------------------------------------CTAGGT--------------------------------CCCAAGCAGctgtagaggccagag-------------------gcagcgcagagcaggtgtcctccta-c-----------------------------------------------agcctccag-aggcaccagccctgctgactccctggatttggcccagtg-aaactcattttgggcttct-gacctccagcactgcaagagaagaaatctgtgcacttttaaaccactaggcttgtggtatctgtttcagcagcagtggaagaGGGCAAAATTCTC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 48991 302 + 376347 gggtccgtgtgagag-ggaggcggcaagctcacagggagggcgatgggg-----cagcagCTCAGACAGGGCAGAGG------------CCGC------ACAGCTGGC----------------------------------------------------------------------------------------------------CTGGGT--------------------------------GCcgagcagctgtagaggccggag-------------------atggcgcagagcaggtgttctcctg-t-----------------------------------------------ggccttcag-aggcgccagtcctgctgactccctggatttggcccagtg-aaactcattttgggcttct-gacctccagcactgcaagagaagaagtctgtgctattttaaaccactaagcttgtggtatctgtttcagcagcagtgggagaGGGCGAAATGCTC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2168796 495 - 8137123 gggtcctt---agagtggaggctgcaagctcaaagagaaggtgataagac--aatag-agcagagac--agaagatg------------ccac------acagctggcttcagaggggagggaggTACAGGGAAGCTTCTAGAACAGGCATCCTCAAACTACGGCCTGCGGGCCACATGCGGCCTACTGAGGACATTTATCCGGCCTGCTGGGTGTTTTTGCCACCGCTGCCTGTCCTGCTTAGCAGCCGACTGGCCCCAGGGCCCGCagtctggccctctgacggtctgagggacagtg-aactggcctcctg-tttaaaaagtttgaggacccctgTGAAGCTGAAGGAAGCACAGGGCagagctctctg-gggaacaagctctgcaggtcccgtgaacttagcccggta-aaactcatctcggactcct-ggccgccagcactgtaagaggataaatctgtgttgttcggagcttctgagctgggtg-atttgctccagtagccatgggaG-GGGCGGAATGTTC i otoGar3.GL873611 C 0 C 0 a score=164199.000000 s hg38.chr3_KI270784v1_alt 98489 28 + 184404 TC----CAGCTTGGCACCCACAGCCCAGCTCA s panTro5.chr10 10822 30 + 135926727 CCCTCTCAGCTTGGCA-CCACAG-CCAGCTCA i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 2966 28 + 508821 TC----CAGCTTGGCACCCGCAGCCCAGCTCA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr3 33937217 28 + 185818997 TC----CAGCTTGGCACCTGCAGCCCAGCTCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33553156 28 + 192294377 TC----CAGCTTGGCACCTGCAGCCCAGCTCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4314509 28 - 9440265 TC----CAGCTTGGCACCTGCAGCCCAGCTCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16904204 28 - 21915920 TC----CAGCTTGGCACCCGCAGCCCAGTTCA i cerAty1.NW_012002954v1 C 0 I 2791 s chlSab2.chr28 43834 28 - 21531802 TC----CAGCTTGGCACCCGCAGCCCAGCTCA i chlSab2.chr28 C 0 I 2577 s manLeu1.NW_012101810v1 68019 28 - 2515279 TC----CAGCTTGGCACCCGCAGCCCAGTTCA i manLeu1.NW_012101810v1 C 0 I 2539 s colAng1.NW_012117710v1 224179 28 + 6586416 TC----CAGCTTGGCACCTGCAGCCCAGCTCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146589631 28 - 204313951 TC----CAGCTTGGCCCCCACAGCCCAGCTTG i calJac3.chr2 C 0 I 2351 s cebCap1.NW_016107703v1 435490 28 - 2125214 TC----CAGCTTGGCACCCACAACCCAGCTCG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 49293 28 + 376347 TC----CAGCTCGGCACCCACAGCCCAGCTCG i aotNan1.NW_018514293v1 C 0 I 2322 s otoGar3.GL873611 2169291 13 - 8137123 -------------------TCAGTCCAGCTTG i otoGar3.GL873611 C 0 C 0 e nomLeu3.chr20 96742 0 + 85365473 I a score=34762.000000 s hg38.chr3_KI270784v1_alt 98517 4 + 184404 AAGG s panTro5.chr10 10852 4 + 135926727 AAGG i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 2994 4 + 508821 AAGG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr3 33937245 4 + 185818997 AAGG i rheMac8.chr3 C 0 I 2177 s macFas5.chr3 33553184 4 + 192294377 AAGG i macFas5.chr3 C 0 I 2566 s macNem1.NW_012019910v1 4314537 4 - 9440265 AAGG i macNem1.NW_012019910v1 C 0 I 2224 s cerAty1.NW_012002954v1 16907023 4 - 21915920 aagg i cerAty1.NW_012002954v1 I 2791 C 0 s chlSab2.chr28 46439 4 - 21531802 AAGG i chlSab2.chr28 I 2577 C 0 s manLeu1.NW_012101810v1 70586 4 - 2515279 aagg i manLeu1.NW_012101810v1 I 2539 C 0 s colAng1.NW_012117710v1 224207 4 + 6586416 AAGG i colAng1.NW_012117710v1 C 0 I 3119 s calJac3.chr2 146592010 4 - 204313951 AAGG i calJac3.chr2 I 2351 C 0 s cebCap1.NW_016107703v1 435518 4 - 2125214 AAGG i cebCap1.NW_016107703v1 C 0 I 2338 s aotNan1.NW_018514293v1 51643 4 + 376347 AAGG i aotNan1.NW_018514293v1 I 2322 C 0 s otoGar3.GL873611 2169304 4 - 8137123 AAGG i otoGar3.GL873611 C 0 I 3913 e nomLeu3.chr20 96742 0 + 85365473 I a score=4119.000000 s hg38.chr3_KI270784v1_alt 98521 6 + 184404 ----CAGGGA s panTro5.chr10 10856 3 + 135926727 ----C---GA i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 2998 6 + 508821 ----CAGGGA i gorGor5.CYUI01015884v1 C 0 C 0 s cerAty1.NW_012002954v1 16907027 6 - 21915920 ----cagggg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 46443 6 - 21531802 ----CAGGGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 70590 6 - 2515279 ----cagggg i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146592014 6 - 204313951 ----CAGGAG i calJac3.chr2 C 0 C 0 s aotNan1.NW_018514293v1 51647 6 + 376347 ----CAGGGG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2173221 6 - 8137123 CAATCA---- i otoGar3.GL873611 I 3913 C 0 e cebCap1.NW_016107703v1 435522 2338 - 2125214 I e colAng1.NW_012117710v1 224211 3119 + 6586416 I e rheMac8.chr3 33937249 2177 + 185818997 I e macNem1.NW_012019910v1 4314541 2224 - 9440265 I e macFas5.chr3 33553188 2566 + 192294377 I e nomLeu3.chr20 96742 0 + 85365473 I a score=151553.000000 s hg38.chr3_KI270784v1_alt 98527 49 + 184404 CTGTGGTTGCTTTG-CAAATGAGG-GAGGCTGGGTCCCTGCCCTCACCGGG s panTro5.chr10 10859 51 + 135926727 CTGTGGTTGCTTTGCCAAATGAGGCGAGGCTGGGTCCCTGCCCTCACCGGG i panTro5.chr10 C 0 I 3790 s gorGor5.CYUI01015884v1 3004 49 + 508821 CTGTGGTTGCTTTG-CAAATGAGG-GAGGCTGggtccctgccctcaccggg i gorGor5.CYUI01015884v1 C 0 C 0 s cerAty1.NW_012002954v1 16907033 49 - 21915920 ctgtggttgcttca-cagatgagg-gaggctgggtccctgccctcaccagg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 46449 49 - 21531802 CTGTGGTTGCTTCG-CAGATGAGG-GAGGCTGGGTCCCTGCCCTCACTGGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 70596 49 - 2515279 ctgtggttgcttca-cagatcagg-gaggctaggtccctgccctcaccagg i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146592020 49 - 204313951 CTGTGGTTGCTTTG-CAGACATGA-GAGGCTGGGTCCCTGTTTTCACCAGG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 437860 49 - 2125214 ctgtggttgctttg-cagatgtga-gaggctgggtccctgccctcactggg i cebCap1.NW_016107703v1 I 2338 C 0 s aotNan1.NW_018514293v1 51653 49 + 376347 CTGTGGTTGCTTTG-CGGACGTGA-GAGGCTGggtccctgccctcactggg i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2173227 42 - 8137123 CTGAG-------TA-CAAGTGAGG-GAGGCTGGGTCCCTCCCCTCAGGGGC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 224211 3119 + 6586416 I e rheMac8.chr3 33937249 2177 + 185818997 I e macNem1.NW_012019910v1 4314541 2224 - 9440265 I e macFas5.chr3 33553188 2566 + 192294377 I e nomLeu3.chr20 96742 0 + 85365473 I a score=125341.000000 s hg38.chr3_KI270784v1_alt 98576 44 + 184404 CTTACCATCTAGGTATGGAGAGGAGTAACGT-AAGGTGAAGTCAG s panTro5.chr10 14700 44 + 135926727 CTTACCGTCTAGGTATGGAGAGGAGTAACGT-AAGGTGAAGTCAG i panTro5.chr10 I 3790 C 0 s gorGor5.CYUI01015884v1 3053 44 + 508821 cttaccatctaggtatggagaggagtaatgt-aaggtgaagtcag i gorGor5.CYUI01015884v1 C 0 C 0 s cerAty1.NW_012002954v1 16907082 44 - 21915920 cttaccatctaggtacggagcagagtaatgt-aaggcgaagtcag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 46498 44 - 21531802 CTTACCATCTAGGTACGGAGTGGAGTAACAT-AAGGTGAAGTCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 70645 44 - 2515279 cttaccgtctaggtacggagcagagtaatgt-aaggcgaagtcag i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146592069 45 - 204313951 CTTACCATCCAGACATGGAGAGGAGCAACGTAAAGGTGAAGTCAG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 437909 45 - 2125214 cttaccatccagacatggagaggagaaacataaaggtgaagtcag i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 51702 45 + 376347 cttaccagccagacatggagaggagcaacgcaaagctgaaatcag i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2173269 44 - 8137123 CTTAAAATCAGGGACTGGGGAAGAGTAATAA-AAAGCAGAGTCAG i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 224211 3119 + 6586416 I e rheMac8.chr3 33937249 2177 + 185818997 I e macNem1.NW_012019910v1 4314541 2224 - 9440265 I e macFas5.chr3 33553188 2566 + 192294377 I e nomLeu3.chr20 96742 0 + 85365473 I a score=645469.000000 s hg38.chr3_KI270784v1_alt 98620 213 + 184404 AAAAGAATCATAAGAAAAGAAAGTCCACACCCTGGAAGGATCTGAGGCAGAAGGAAGCTCTTGCTGAACCACCTGAGAGGAGGCGGTCTGGCCTGGGCACCCTGGGGGGCCTGTGCCCCCACTTCGAGGCCCCCCTGGAAGGTGCTTGGCTCTCCGGATGACCCCAGCACTGGGGAGACCCGCTGTGCTTTCCAGGCAGCACAGACACCTCGG s panTro5.chr10 14744 213 + 135926727 AAAAGAATCATAGGAAAAGAAAGTCCACACCCTGGAAGGATCTGAGGCAGAAGGAAGCTCTTGCTGAACCACCTGAGAGGAGGCGGTCTGGCCTGGGCACCCTGGGGGGCCGGCGCCCCCACTTCAAGGCCCCCCTGGAAGGTGCTTGGCTCTCCAGATGACCCCAGCACTGGGGAGACCCGCTGTGCTTTCCAGGCAGCACAGACACCTCGG i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 3097 212 + 508821 aaaagaatcataagaAAAGAATGTCCACA-CCTGGAAGGATCTGAGGCAGAAGGAAGCTCTTGCTGAACCACCTGAGAGGAGGCAGTCTGGCCTGGGCACCCTGGGGGGCCTGTGCCCCCACTTCAAGGCCCCCCTGGAAGGTGCTTGGCTCTCTGGATGACCCCAGCACTGGGGAGACCCGCTGTGCTTTCCAGGCAGCACAGACACCTCGG i gorGor5.CYUI01015884v1 C 0 C 0 s cerAty1.NW_012002954v1 16907126 203 - 21915920 aaaagaatcataagaGAAGAAAGTCCACACCCCAGAAGGATCTGAGGCAGAAGGAAGCTCTTGCCAAACCACCTGAGAGGA--------GGCCTGGGCACCCTGGGGGG-CGGTGCCCCCACTTCAAGGTCCCCC-AGAAGGTGCTTGGCTCTCCAGATGACCCCAGCGCTGGGGAGACCCGCTGTGCTTTCCCGGCAACATGGACACCCCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 46542 203 - 21531802 AAAAGAATCATAAGAAAAGAAAGTCCACACCCCGGAAGGATCTGAGGCAGAAGGAAGGTCTTACCAAACTACCTGAGAGGA--------GGCCTGGGCACCCTGGGGGG-CGGTGCCCCCACTTCAAGGCCCCCC-AGAAGGTGCTTGGCTCTCCAGATGACCCCAGCGCTGGGGAGACCCGCTGTGCTTTCCCGGCAGCACGCACCCCTCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 70689 203 - 2515279 aaaagaatcataagaaaagaaagtccaCACCCCAGAAGGATCTGAGGCAGAAGGAAGCTCTTGCCAAACCACCTGAGAGGA--------GGCCTGGGCACCCTGGGGGG-CGGTGCCCCCACTTCAAGGTCTCCC-GGAAGGTGCTTGGCTCTCCAGATGACCCCAGCGCTGGGGAGACCCGCTGTGCTTTCCCGGCAGCATGGACACCCCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 227330 203 + 6586416 aaaaaaatcataagaaaagacagtccataCCCCGGAAGGATCTGAAGCAAAAGGAAGCTCTTGCCAAACCACCTGAGAGGA--------GGCCTGGGCACCCTGGGGGG-CAGTGCCCCCACTTCAAGGTCCCCC-GGAAGGTGCTTGGCTCTCCAGATGACCCCCGCGCTAGGGAGACCCGCTGTGCCTTCCCGGCAGCACGGACACCTCAG i colAng1.NW_012117710v1 I 3119 C 0 s calJac3.chr2 146592114 211 - 204313951 AAAAGAATCAAAAGTGAAGAAAGTGCACACCCTGGGAGCACCTGAGGCAGAAGGGGGCTCTTCCTGAGCCACCAGAGAAGAGGCAGTCTGGCCTGGGCACCCTAGGGGGCTGGCACCCCCACATCAAGGCTCCCCTGGAAGGCTCTTGGCTCTCCAAATGA-CCCAGCACTGGGGAGA-CCACTGTGCTTTCCAGGCAGCAAAGACACCTCAG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 437954 212 - 2125214 aaaagaatcataagcaaagaaagtacacaCCCTGGGAGCATCCAAGGCAGAAGGGGGCTCTTCCTGAACCACCGGAGAAGAGGCAGTCTGGCCTGGGCAACCTGGGGGGCTGGCACCTCCTCATCAAGGCTCCCCTGGAAGACTCTTGGCTCTCCAGATGACCCCAGCACTGGGGAGA-CCACTGTGCTTTCCAGGCAGCAAAGACACCTCAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 51747 184 + 376347 aaaagaaccataAGCAAAGAAAGCGCACACCCCGGGAGCCTCCAAGGCGGGAGGGGGCTCTCCCTGAACCACCGGAGAAGAGGCAGTCTGGCCTGGGCGCCC--GGGGGCCGGCGCCCCCACATCAAGGCTCCCCTGGAAGGCTCTTGGCTCTCCGGATGACCCCAGCACTGGGG---------------------------AGACACCTCAG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2173313 106 - 8137123 CAAAGAAACATAAGAAAAGAGAGTGCCCATGCTGGGAGCACCTGCGGCAGAAAGGA-CTCTGCCTGAACCATAC-AACGGA--------GGCTGGGGAAGCCTGGGGTG------------CTTCTAG------------------------------------------------------------------------------------- i otoGar3.GL873611 C 0 C 0 e rheMac8.chr3 33937249 2177 + 185818997 I e macNem1.NW_012019910v1 4314541 2224 - 9440265 I e macFas5.chr3 33553188 2566 + 192294377 I e nomLeu3.chr20 96742 0 + 85365473 I a score=2545350.000000 s hg38.chr3_KI270784v1_alt 98833 415 + 184404 TGTAGGTGTTGTGGTGCCACAGGGAAGGGTGTTTCTTCCAGCCTGGTTCTCAGGACGGGCTGCTGGCTGGAACAAACCCCACCTCT--------------ATCTGAGCCACCA---ACCATCTGAACCGGTATTCTCTCTATCTGACAAATATTCCTCCTTCTTTACATCCCAGAAATG-------GTGAAAATGCACAATGCCTCAGGACACCTTGAGGAAGGAGCAGCGTGTTGCTGCCGAGGGTGAACACACGTGGTCTCTGCGGAGAGGCGACAGATCTCCCTGGGCGTCAGTCATCCTGGG-------ACTGGGTGTCGTGGAAGAAGGTGACACCAGGCAGAAACCAAGAGCAGGGGAGCTGCAGGCCGGCATCAGAGCCCG------------TATCAGAGCAG---AGTGGCCCCTGAGC-GGGGAGGGAGCCGGAGAT--CACTGTTGGAGGAGG s panTro5.chr10 14957 418 + 135926727 TGTAGGTGTTGTGGTGCCACAGGGAAGGGTGTTTCTTCCAGCCTGGTTCTCAGGACGGGCTGCTGGCTGGAACAAACCCCACCTCT--------------ATCTGAGCCACCACCAACCATCTGAACCGGTATTCTCTCTATCTGACAAATATTCCTCCTTCTTTACATCCCAGAAATG-------GTGAAAATGCACAATGCCTCAGGACGCCTTGAGGAAGGAGCAGCGTGTTGCTGCCGAGGGTGAACACACGTGGTCTCTGTGGAGAGGCGACAGATCTCCCTGGGCGTCAGTCATCCTGGG-------ACTGGGTGTCGTGGAAGAAGGTGACACCAGGCAGAAACCAAGAGCAGGGGAGCTGCAGGCCGGCATCAGAGCCCG------------TATCAGAGCAG---AGTGGCCCCTGAGC-GGGGAGGGAGCCGGAGCT--CACTGTTGGAGGAGG i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 3309 415 + 508821 TGTAGGTGTTGTGGTGCCACAGGGAAGGGTGTTTCTTCCAGCCTGGTTCTCAGGACGGGCTGCTGGCTGGAACAAACCCCACCTCT--------------ATCTGAGCCACCA---ACCATCTGAACCGGTATTCTCTCTATCTGACAAATATTCCTCCTTCTTTACATCCCAGAAATG-------GTGAAAATGCACAATGCCTCAGGACGCCTTGAGGAAGGAGCAGCGTGTTGCTGCCGAGGGTGAACACACGTGGTCTCTGCGGAGAGGCGACAGATCTCCCTAGGCGTCAGTCATCCTGGG-------ACTGGGTGTCGTGGAAGAAGGTGACACCAGGCAGAAACCAAGAGCAGGGGAGCTGCAGGCCGGCATCAGAGCCCA------------TATCAGAGCAG---AGTGGCCCCTGAGC-GGGGAGGGAGCCGGAGAT--CACTGTTGGAAGAGG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr3 33939426 430 + 185818997 TGTGGGTGTTTTGGTGCCACGGGGAAGGGTGTTTCTTTCAGCCTAGCTCTCAGGACGGGCTGCTGGCTGGAACCAACCCCATCTCT--------------ATCTGAGCTGTCA---ACCGCCTGAACAGGCATTCTCTATGTCTGACAAGTCTTCCTC---CTTTACATCCCAGAAATG-------ATGAAAATACACAGTTCCTCAGGACACCCTGAGGGAGGAGCAGCGTGCTGCTGCCGAGGGTGAACACACGTGGTCTCTGAGGGGAGGTGGTGGATCTCCCTGGGCATCCGTCATCCTGGGACTGGGGACTGGGTGTCGTGGAAGAAGGTGACACTGGGCAGACACCAAGAGCGGGGGAGCTGCAGGCCGGTATCAGAGCCTGTATCAGAACCCATGTCAGAGCAG---AGTGGCCCCCGAGC--GGGAGGGAGCCGGAGCT--CACTGCTGGAGGAGG i rheMac8.chr3 I 2177 N 0 s macFas5.chr3 33555754 430 + 192294377 TGTGGGTGTTTTGGTGCCACGGGGAAGGGTGTTTCTTTCAGCCTAGCTCTCAGGACGGGCTGCTGGCTGGAACCAACCCCATCTCT--------------ATCTGAGCTGTCA---ACCGCCTGAACAGGCATTCTCTATGTCTGACAAGTCTTCCTC---CTTTACATCCCAGAAATG-------ATGAAAATACACAGTTCCTCAGGACACCCTGAGGGAGGAGCAGCGTGCTGCTGCCGAGGGTGAACACACGTGGTCTCTGAGGGGAGGTGGTGGATCTCCCTGGGCATCCGTCATCCTGGGACTGGGGACTGGGTGTCGTGGAAGAAGGTGACACTGGGCAGACACCAAGAGCAGGGGAGCTGCAGGCCGGTATCAGAGCCTGTATCAGAACCCATGTCAGAGCAG---AGTGGCCCCCGAGC--GGGAGGGAGCCGGAGCT--CACTGCTGGAGGAGG i macFas5.chr3 I 2566 C 0 s macNem1.NW_012019910v1 4316765 433 - 9440265 TGTGGGTGTTTTGGTGCCACGGGGAAGGGTGTTTCTTTCAGCCTAGCTCTCAGGACGGGCTGCTGGCTGGAACCAACCCCATCTCT--------------ATCTGAGCTGTCA---ACCGCCTGAACAGGCATTCTCTATGTCTGACAAGTCTTCCTCCTTCTTTACATCCCAGAAATG-------GTGAAAATACACAGTTCCTCAGGACGCCCTGAGGGAGGAGCAGCGTGCTGCTGCCGAGGGTGAACACACGTGGTCTCTGAGGGGAGGTGGTGGATCTCCCTGGGCATCCGTCATCCTGGGACTGGGGACTGGGTGTCGTGGAAGAAGGTGACACTGGGCAGACACCAAGAGCGGGGGAGCTGCAGGCCGGTATCAGAGCCTGTATCAGAACCCATGTCAGAGCAG---AGTGGCCCCTGAGC--GGGAGGGAGCCGGAGCT--CACTGCTGGAGGAGG i macNem1.NW_012019910v1 I 2224 N 0 s cerAty1.NW_012002954v1 16907329 433 - 21915920 TGTGGGTGTTTTGGTGCCACGGGGAAGGGTGTTTCTTCCAGCCTGGCTCTCAGGACGGGCTGCTGGCTGGAACCAACCCCATCTCT--------------ATCTGAGCCGTCA---ACCGCCTGAACAGGCATTCTCTATGTCTGACAAGTCTTCCTCCTTCTTTACATCCCAGAAATG-------GTGAAAATACACAGTTCCTCAGGACGCCCTGAGGGAGGAGCAGCGTGCTGCTGCCGAGGGTGAACACACGTGGTCTCTGAGGGGAGGTGGTGGATCTCCCTGGGCATCCATCATCCTGGGACTGGGGACTGGGTGTCGTGGAAGAAGGTGACACTGGGCAGACACCAAGAGCGGGGGAGCTGCAGGCCGGTATCAGAGCCTGTATCAGAACCCATGTCAGAGCAG---AGTGGCCCCCGAGC--GGGAGGGAGCCGGAGCT--CACTGCTGGAGGAGG i cerAty1.NW_012002954v1 C 0 N 0 s chlSab2.chr28 46745 431 - 21531802 TGTGGGTGTTGTGGTGCCACAGGGAAGGGTGTTTCTTCCAGCCTGGTTCTCAGGATGGGCTGCTGGCTGGAACCAACCTCATCTCT--------------ACCTGAGCCGTCA---ACCACCGGAACCGGCATTCTCTCTGTCTGACAGGTCTTCCTTTTTCTTTACATCCCAGAAATG-------GTGAAAATACACAGTTCCTCAGGACGCCCTGACAGAGAAGCAGCGTGCTGCTGCTGAGGGTGAACTCACATGGCCTC--AGAGGAGGCGGTGGATCTCCCTGGGCATCCGTCACCCTGGGACTGGGAACTGGGTGTCATGGAAGAAGGTGACACCGGGCAGACAGCAACAGTGGGGGAGCTGCAGGCCGGTATCAGGGCCTGTATCAGAGCCCGTGTCAGAGCAG---AGTGGCCTCCGAGC--GGGAGGGAGCTGGAGCT--CACTGCTGGAGGAGG i chlSab2.chr28 C 0 N 0 s manLeu1.NW_012101810v1 70892 433 - 2515279 TGTGGGTGTTTTAGTGCCACGGGGAAGGGTGTTTCTTCCAGCCTGGCTCTCAGGACGGGCTGCTGGCTGGAACCAACCCCATCTCT--------------ATCTGAGCCATCA---ACCGCCTGAACAGGCATTCTCTATGTCTGACAAGTCTTCCTCCTTCTTTACATCCCAGAAATG-------GTGAAAATACACAGTTCCTCAGGATGCCCTGAGGGAGGAGCAGCGTGCTGCTGCCGAGGGTGAACACACGTGGTCTCTGAGGGGAGGTGGTGGATCTCCCTGGGCATCCGTCATCCTGGGACTGGGGACTGGGTGTCGTGGAAGAAGGTGACACTGGGCAGACACCAAGAGCAGGGGAGCTGCAGGCCGGTATCAGAGCCTGTATCAGAACCCATGTCAGAGCAG---AGTGGCCCCCGAGC--GGGAGGGAGCCGGAGCT--CACTGCTGGAGGAGG i manLeu1.NW_012101810v1 C 0 N 0 s colAng1.NW_012117710v1 227533 412 + 6586416 TGTGGGTGCTGTGGTGCCACGGGGAAGGGTGTTTCTTCCAGCCTGGTTCTCAGGACGGGCTGCTGGCTGGAGCCAACCCCATCTCT--------------ATCTGAGCTGTCA---GCCGCCTGAACCGGCATTCTCTCTATCTGACAAGTCTTCCTCCTTCTTTACATCCCAGAAACGGTGAAAAGTGAAAATGCACAGTTCCTCAGGACGCCCTGATGGAGGA-------GCCGCTGCCG-GGGTGAACGCATGTGGTCTCTGAGGGGAGGTGAAGGATCTCCCTGGGCATCCGTCATCCTGGG-------ACTGGGTGTCGTGGGAGAAGCTGACACCGGGCAGACACCAAGAGC-GGGGAGCTGCAGGCCGGTATCAGAGCCTG------------TGTCAGAGCAG---AGCGGCCCCCGAGC--GGGAGGGAGCCAGAGCT--CACTGCTGGAGGAGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146592325 425 - 204313951 TCA-GGTGCTGTGGT--CACAGGAAAGGGTGTTTCTTCCAGCCTGGTTCTCAGGATGGGGTGCTCATTGGAACCAAACCTACCTCGCTCAATTTTGTTCAATTTGAGCCATCA---ACCACCTGAACTGGTATTCTCTCTATCTAAAAAATATTCCTTTTCCTTTACATCCCAGAAGTG-------GTGAAACTGCACAATTCCTCAGGACACCTTGAGGGAGAAGCAGCATGTTTCTGCC-ACAGTGAACACACGTGGTCTATGAGGAGCGGCCATGGATCCCCCTGGGTGTCAGTCATCCTGGG-------ACCGGACGTCATGGAAGAAGGTGACACCAGGCAGACACCAAGAGCAGGGGAGCTGCCGTCCAGTATCAGAGCCTG------------TATCAGAGCAG---AGCAGCCCCTGAGA-GGGGAAGGAGCTGGAGCT--CACTGCTGGAGGAGC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 438166 427 - 2125214 TGAGGGTGCTGTGGTGCCACAGGAAAGGGTGTTTCTTCCAGCCTGGCTCTCAGGACGGGGTGCTGGTTGGAACCAACCCCACCTCGCTCAATTTCGTTCAATTTGAGCCATCA---GCCACCTGAACTGGTGTTCTCACTATCTGAAAAATATTTCTTTTGCTTTATATCCCAGAAATG-------GTGAAACTGCACAATTCCTCAGGACACCTTGAGGGAGGAGCAGCGTGTTGCTGCC-ACGGTGAACACACATGGTCTATGAGGAGTGGCCATGGATCCCCTTGAGTGTCGGTCATCCTGGG-------ACTGGATGTCATGGAAGAAGGTGACACCAGGCAGACCCCAAGAGCAGGGGAGCTGCCATCCAGTATCAGAGCCTG------------TATCAGAGCAG---AGCAGCCCCTGAGC--AGGAGGGAGCTGGAGCT--CACTGCTGGAGGAGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 51931 426 + 376347 CGACGGTGCCGTGGTGCCACGGGAAAGGGTGTTTCTTCCGGCCTGGTTCTCAGGACGGGGTGCTGGTTGGAACCAACACCACCTCGCTCAATTTTGCTCAATTTGAGCCATCA---GCCACCTGAACTGGTATTCTCTCTATCTGAAAAATATTCCTTTTTCTTTATATCCCAGAAATG-------GTGACACTGCACGATTCCTCAGGACACCTTCAGGGAGGAGCAGCGTGTTGCTGTC-ATGGTGAGCACACGTGGTCTCTGAAGAGCGGCCATGGATCCCCTTGGGTGTCGGTCATCCTGGG-------ACTGGATGTCATGGAAGAAGGTGACACCAGGCAGACACCAAGAGCA-GGGAGCTGCCGTCCGGTGTCAGAGCCTG------------TATCAGAGCAG---AGCGGCCCCTGAGC--AGGACGGAGCCGGAGAT--CAGTGCTGGAGGAGG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2173419 352 - 8137123 --TGGACGT----------CAGTGAGGGGGTTTCCTTCCAGCCTGCTTCCTGGGACAGAGTGCTGGCTGGAACCAGTTCCACCTCT--------------GTCTGAGCCGTTA---ACCACCTGAGCTGGTGTTC----TGTCTGAAAAGTACTCTTCCTTCCTTCTATCACAGTAGTG-------GTGAGAACGCATAGTTTCTCAGGATGCCTTCAGGAAGGAGAAG----------------------------------------GAGGTAGGAGCTTCCTTTAGG-----------CCAGG-------ACTGGATGGCATTG----AGGTGACAGCAGG-GGATGCTGAGAGCAGGGGAGCCACACTGAGGTGCTGGACACAA---------CCTTATCCGAGTGGCCAGGTGGCCCTCGATTCAGGGTGGGTGTCGGGGCCCACACTGTGGGAGGAGG i otoGar3.GL873611 C 0 C 0 e nomLeu3.chr20 96742 0 + 85365473 I a score=18919.000000 s hg38.chr3_KI270784v1_alt 99248 9 + 184404 GCCCGGCAC s panTro5.chr10 15375 9 + 135926727 GCCCGGCAC i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 3724 9 + 508821 GCCCGGCAC i gorGor5.CYUI01015884v1 C 0 C 0 s macFas5.chr3 33556184 2 + 192294377 -------AC i macFas5.chr3 C 0 C 0 s colAng1.NW_012117710v1 227945 9 + 6586416 GCCCGGCAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146592750 9 - 204313951 GCCCAGCAC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 438593 9 - 2125214 GCCCAGCAC i cebCap1.NW_016107703v1 C 0 N 0 s aotNan1.NW_018514293v1 52357 9 + 376347 GCCCAGCAC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2173771 9 - 8137123 ATCCAGTGC i otoGar3.GL873611 C 0 C 0 e nomLeu3.chr20 96742 0 + 85365473 I a score=5348.000000 s hg38.chr3_KI270784v1_alt 99257 2 + 184404 CT s panTro5.chr10 15384 2 + 135926727 CT i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 3733 2 + 508821 CT i gorGor5.CYUI01015884v1 C 0 C 0 s macFas5.chr3 33556186 2 + 192294377 CT i macFas5.chr3 C 0 C 0 s colAng1.NW_012117710v1 227954 2 + 6586416 CT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146592759 2 - 204313951 CT i calJac3.chr2 C 0 N 0 s aotNan1.NW_018514293v1 52366 2 + 376347 CT i aotNan1.NW_018514293v1 C 0 N 0 s otoGar3.GL873611 2173780 2 - 8137123 CT i otoGar3.GL873611 C 0 C 0 e nomLeu3.chr20 96742 0 + 85365473 I a score=16815.000000 s hg38.chr3_KI270784v1_alt 99259 19 + 184404 GCACCTGAGGACGTGAGTC s panTro5.chr10 15386 19 + 135926727 GCACCTGAGGACGTGAGTa i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 3735 19 + 508821 GCACCTGAGGACGTGAGta i gorGor5.CYUI01015884v1 C 0 C 0 s macFas5.chr3 33556188 19 + 192294377 GCATGTGAGGACGTGAGTC i macFas5.chr3 C 0 C 0 s colAng1.NW_012117710v1 227956 19 + 6586416 GCATATGAGGACGTGAGTC i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2173782 15 - 8137123 ----GTGGGGTCGTCAGCC i otoGar3.GL873611 C 0 N 0 e nomLeu3.chr20 96742 0 + 85365473 I a score=910.000000 s hg38.chr3_KI270784v1_alt 99278 1 + 184404 t s panTro5.chr10 15405 1 + 135926727 t i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 3754 1 + 508821 t i gorGor5.CYUI01015884v1 C 0 C 0 s macFas5.chr3 33556207 1 + 192294377 T i macFas5.chr3 C 0 C 0 s colAng1.NW_012117710v1 227975 1 + 6586416 T i colAng1.NW_012117710v1 C 0 N 0 e nomLeu3.chr20 96742 0 + 85365473 I a score=726.000000 s hg38.chr3_KI270784v1_alt 99279 2 + 184404 aa s panTro5.chr10 15406 2 + 135926727 aa i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 3755 2 + 508821 aa i gorGor5.CYUI01015884v1 C 0 C 0 s macFas5.chr3 33556208 2 + 192294377 GA i macFas5.chr3 C 0 N 0 e nomLeu3.chr20 96742 0 + 85365473 I a score=3260.000000 s hg38.chr3_KI270784v1_alt 99281 20 + 184404 taaaagagtataaataatat s panTro5.chr10 15408 20 + 135926727 taaaagagtataaataatat i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 3757 15 + 508821 taaaagagcataa-----at i gorGor5.CYUI01015884v1 C 0 C 0 e nomLeu3.chr20 96742 0 + 85365473 I a score=-15.000000 s hg38.chr3_KI270784v1_alt 99301 3 + 184404 -aat s panTro5.chr10 15428 3 + 135926727 -aat i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 3772 3 + 508821 -aat i gorGor5.CYUI01015884v1 C 0 C 0 s macFas5.chrUn_KE145888 25455 3 - 342590 AAA- i macFas5.chrUn_KE145888 N 0 C 0 e nomLeu3.chr20 96742 0 + 85365473 I a score=16055.000000 s hg38.chr3_KI270784v1_alt 99304 27 + 184404 aaaagagagtataataaaaaaataatT s panTro5.chr10 15431 25 + 135926727 aaaagag--tataataaaaaaataatT i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 3775 27 + 508821 aaaagagagtataataaaaaaataatt i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44648936 26 + 86207423 AAGAAAGAGTATAAT-AAAAAATGATT i nomLeu3.chr21 I 11042 C 0 s macFas5.chrUn_KE145888 25458 26 - 342590 GAAAGAGAGTGTAAT-AAAAAACAATT i macFas5.chrUn_KE145888 C 0 C 0 a score=735361.000000 s hg38.chr3_KI270784v1_alt 99331 619 + 184404 TAAAGAAAATAGAGCTTGATAAATCTGTTTCTTCATCTTCATAATAATGTCAAATTTGTTGAGATTTTTTTT-AAATGGCACGATTTGTCTACAGATCTTTGTACTCTGTCTGGCTTAAATTAAATATATATACAACTTATATAATAAAATACTGGGCTGTTTTATTATTATATTGATAATTTCTTAGTCAACACTACTTTGATCATATTCTATAAATGGCACTGTAAGACCTGTGACTGGTTATCAACAACATAAAGTGATTATGAGAGTTTCATGTGACAGATGAAGGAAGGTTGGTTAGTGCAGTGGCAATAGTTGGCAACCTGAGAAACTGAGCTCACAATTTTAGAAAAGTATTATTCTTTCTAACTAGATATTTCCATGAAAAGAACCTTGTGAAATGCAGAAATGCCAAAAGAATAATTATAAGATAATAACCAAATAACTAAAATGCATCTCAATTTCTCTGACAATTTAACTTAACGTGGGGTGCAGGCAGAATCACAATGTTTACAAACATAGGCATTTATGATCTCAAGACGTTTAATTCTTAGCTCATTGAGGAAAACAGTAGCGGAACTGTTATTGCAGAGATAAAAGACAGAAAACAGTGGAAGGG s panTro5.chr10 15456 615 + 135926727 TAAAGAAAAGAGAGCTTGATAAATCTGTTTCTTCATCTTCATAATAATGTCAAATTTGTTGAGATTTTTTTTTAAATGGCACGATTTTTCTACAGATCTTTGTACTCTGTCTGGCTTAAAT-----ATATATACAACTTATATAATAAAATACTGGGCTGTTTTATTATTATATTGATAATTTCTTAGTCAACACTACTTTGATCATATTCTATAAACGGCACTGTAAGACCTGTGACTGGTTATCAACAACATAAAGTGATTATGAGAGTTTCATGTGACAGATGAAGGAAGGTTGGTTAGTGCAGTGGCAATAGTTGGCAACCTGAGAAACTGAGCTCACAGTTTTAGAAAAGTATTATTCTTTCTAACTAGATATTTCCATGAAAAGAACCTTGTGAAATGCAGAAATGCCAAAGGAATAATTATAAGATAATAACCAAATAACTAAAATACATCTCAGTTTCTCTGACAATTTAACTTAATGCAGGGTACAGGCAGAATCACGATGTTTACAAACATAGACATTTATGATCTCGAGATGTTTAATTCTTAGCTGGTTGAGGAAAACAGTAGTAGAACTGTTATTGCAGAGATAAAAGACAGAAAACAGTGGAAGGG i panTro5.chr10 C 0 C 0 s panPan2.chr12 80666765 619 - 135337776 TAAAGTAAATCGAGCTCAATAAATCTGTTTCCTCGTCTTTATAATAATGTCAAATTTGTTGAGATTTTTAAA-AAATGGCATGATTTGTCTACAGATCCTTGTATTCTGTCTGGCTTAAATTAAATGCATATACAACTTATATAATAAAATACTGGGCTGTTTTATTATTATATTGATAATTTCTTGTTCACCACCACTTTGATCATATTCTATAAACAGCACGGTGAGACCTATGACTGGATATCAACAACATAAAGTGATTATGAGAGTTTCATGTGACAGATGAAAGAAGGTTGGTTAGTGCAGTGGCAATAGTCAGCAACCTGAGAAACTGAGCTCACAATTTTAGAAAAGTATTATTCTTCCTAACTAGATATTTCCATGAAAAGAACCTTGTGAAATGCAGAAATGCCAAAAGAATAATTATAAGATAATAAAAAAATAACTAAAATACATCTAAATTTCTCTGACAATTTAACTTAATGCAGGGTGCAGCCAGAATCACAATGTTTACTAACATAGCTATTTATGATCTCAATACATTTAATTCTTAGCTCATTGAGGAAAAATGTAGTAGAACTGCTATTGCAGAGACAAAAGACAGAAAACAGGGGAgggg i panPan2.chr12 N 0 I 6939 s gorGor5.CYUI01015884v1 3802 615 + 508821 taaagaaaaGAGAGCTTCATAAATCTGTTTCTTCATCTTCATAATAATGTCAAATTTGTTGAGATTTTTTTT-AAATGGCACGATTTGTCTACAGATCTTTGTAC----TCTGGCTTAAATTAAATATGTATACAACTTATATAATAAAATACTGGGCTGTTTTATTATTATATTGATAATTTCTTAGTCAACACTACTTTGATCATATTCTATAAACGGCACTGTAAGACCTGTGACTGGTTATCAACAACATAAAGTGATTATGAGAGTTTCATGTGACAGATGAAGGAAGGTTGGTTAGTGCAGTGGCAATAGTTGGCAACCTGAGAAACTGAGCTCACAATTTTAGAAAAGTATTATTCTTTCTAACTAGATATTTCCATGAAAAGAACCTTGTGAAATGCAGAAATGCCAAAAGAATAATTATAAGATAATAACCAAATAACTAAAATACATCTCAATTTCTCTGACAATTTAACTTAATGCAGGGTACAGCCAGAATCATGATGTTTACAAACATAGACATTTATGATCTCGAGACATTTAATTCTTAGCTGGTTGAGGAAAACAGTAGTAGAACTGTTATTGCAGAGATAAAAGACAGAAAACAGTGGAAGGG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44648962 596 + 86207423 TAAAGAAAACAGAGCTTGATAAATCTGTTTCTTCATCTTC---ATAATGTCAAATTTGTTGAGATTTTTTAA-AAATGGCATGATTTTTCTACAGATCTTTGTAC----TCTGGCTTAAATTAAATGTATATACAACTTATATAATAAAATACTGGGCTGTTTTATTATTATGTTGATAATTTCTTGGTCAACACTACTTTGATCATGTTCTATAAACGGCACTGTAAGACATATGACTAGTTATCAACAACATAAAGTGACTATGAGAGTTTCATGTGACAGATGAAGGAAGGTTGGTTAGTGCAGTGGCAATAGTCAGCAACCTGAGAAACTGAGCTCACAATTTTAGAAAAGTGTTATTCTTTCTAACTAGATATTTCCATGAAATGAATCTTGTGAAATGCAGAAATGCCGAAAGAAT-ATTATAAGATAATAACCAAATAACTAAAATACCTCTCAATTTCTCTGACAATTTAACTTAATGCAGGGTGCAGCCAGAATCACAATGTTTACTAACATAGACATTTTTGATCTCGAGACATTTAATTCTTAGCTCATTGAGGAAAAAAGTAGTAGAACTGTTATTGCAGAGATAAAAGACAG--------------- i nomLeu3.chr21 C 0 C 0 s macFas5.chrUn_KE145888 25484 611 - 342590 TAAAGAAAATTGAGCTTGATAAATCTATTTCTTTATCTTTATAATAATGCCAAATGTGTTGAGATTTTCTTA-AAATGGCATGATTTGTCTACAGCTCTTTGTACTCTGTCTGGCTTAAATTAAATGTATATACAATTTATATAATAAAATACTGGGCTGTT---TTATTATAGTGATAATTTCTTGGT---CACCACTTTGATCATATTCTACAAATGGCACTGTAAGACCTATGACTAGTTATCAACAACATAAAGTGATCAAGAGAGTTT--TGTGGCAGATGAAGGAAGGTTAGTTAGTGCAGTGGCAATAGTTGGCAACCTGAGAAACCAAGCTTACTATTTTAGAAAAGTATTATTCTTTCTAACTAGATATTTCCATGAAAAGAACCTTGTGAAATGCAGAAATGCCAAAAGAATAATTACAAGATAATAACCAAATAACTAAAATACATCTAAATTTCTCTGACAATTTAACTTAAAGCAGGGTGTAGCCAGAATCACAAAGTTTACTAATATAGACATTTATGATCTCAAGACATTTAATTCTTAGCTCGTTGAGGAAAAAACTAGTAGAATTGTTATTGCAGAGACAAAAGACAGAAAACAGTGGAGGGG i macFas5.chrUn_KE145888 C 0 C 0 a score=9715.000000 s hg38.chr3_KI270784v1_alt 99950 25 + 184404 CTTGATCACAAGTCATATGTTCCAG s panTro5.chr10 16071 25 + 135926727 CTTGATCACAAATCATATGTTCCAG i panTro5.chr10 C 0 C 0 s gorGor5.CYUI01015884v1 4417 25 + 508821 CTTGATCACAAGTCATATGTTCCAA i gorGor5.CYUI01015884v1 C 0 C 0 s macFas5.chrUn_KE145888 26095 23 - 342590 CTTGACCACAAGGC--ATGTTACAA i macFas5.chrUn_KE145888 C 0 C 0 e nomLeu3.chr21 44649558 0 + 86207423 C e panPan2.chr12 80667384 6939 - 135337776 I a score=249992.000000 s hg38.chr3_KI270784v1_alt 99975 210 + 184404 -TTTTGGAAACCTCTAAAAATCCTGCCTGGTGATAGGTTTTTCTTAACTCATTATTGAAGAATATATGAGCAggcagagcatggtggctcaaatctgtaatcccagcactttgggaggccagtgttggaggaacactcgaggccaggagctcaagactagcctgggcaacatagcaagaccctgtctctacaatttctttttaaactagcc s panTro5.chr10 16096 210 + 135926727 -TTTTGGAAACTTCTAAAAATCCTGCCTGGTGATAGGTTTTTCTTATCTCATTATTGAAGAATATATGAGCAggcagggcatggtggctcaaacctgtaatcccagcactttgggaggccaatgtgggaggatcacttgaggccaggagctcaagactagcctgggcaacatagcaagaccctgtctctacaaTTTCTTTTTAAACCAGcc i panTro5.chr10 C 0 I 1438 s panPan2.chr12 80674323 209 - 135337776 -TTTTGGAAACTTCTAAAAATCCTACGTGGTGATAGGTTTTTCTTATCTTATTATTAAAGAATATATGAGCAggcagggcatggtggctcaaacctgtaatcctaacactttgggaggccagtgtttgaggatcacttcaggccaggagtttaagactagcctgggcaacatag-aagaccctgtctctacaatttctttttaaactagcc i panPan2.chr12 I 6939 C 0 s gorGor5.CYUI01015884v1 4442 209 + 508821 -TTTTGGAAACCTCTAAAAATCCTGCCTTGTGATAGGTTTTTCTTATCTCATTATTGAAGAATATATGAGCAggcagggcatggtggctcaaacctgtaatcc-agcactttgggaggccagtgttggaggatcacttgaggccaggagctcaacactagcctgggcaacatagcaagaccctgtctctacaatttctttttaaactagcc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44649558 194 + 86207423 -----------------AAATCCTGCCTGGTGATAGGTTTTTCTTATCTCATTATTGAAGAATATATGAGCAggcagggcatgctggctcaaacctgtaatcccagcagtttgggaggccaatgttggaggatgacttggggccaggagctcaagactagcctgggcaacatagcaaaaccctgtctctacaatttctttttaaaccagcc i nomLeu3.chr21 C 0 C 0 s macFas5.chrUn_KE145888 26118 210 - 342590 TTGTTGGAAACCTCTAAAAATCCTACCTGGTGATAGGTTTTTCTTATCTCCTTATTGAAGAATATATGAGCAggcagggcatggtggctcaaacctgtaattccaacactttgggaggccaatgttgg-gggtcacttgaggtcaggagctcaagactagcctgggcaacatagcaaaaccctgtcccaacagtttctttttaaactagcc i macFas5.chrUn_KE145888 C 0 C 0 a score=107229.000000 s hg38.chr3_KI270784v1_alt 100185 133 + 184404 gactgtggcggcatatgcctgtagtcccagccactagggaggatgaggtgggagactggcttgaccttaggtgtttgaatctggagtcatctgtgattgtgccactgcactccagcaagaatgacagagctag s panPan2.chr12 80674532 133 - 135337776 tgctgtggtggcatatgcctgtagtcccagacactagggaggctgaggtgagagaattgcttgagcttaggtgtttgaatctgtagtgatctatgattgtaccactgcactccagcaagaatgacagagctag i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 4651 133 + 508821 gactgtggcggcatatgccggtagtcccagccactagggaggatgaggtgggagaatggcttaaccttaggtgtttgaatctggaatgatctgtgattgtgccactgcactccagcaagaatgacagagctag i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44649752 133 + 86207423 gactgtggcggcatatgcctgtagtcccagccgctagggaggctgaggtgggagaatggcttcagcttaggtgtttgaatctggagtgatctgtgattgtgccactgcactccagcaagaatgacagggctag i nomLeu3.chr21 C 0 C 0 s macFas5.chrUn_KE145888 26328 133 - 342590 gactgtggtggcatatgcctgtagtcccagccaccagtgaggctgaggtgagagaaatgcttgagcttaagtatttgaatctggagtgagctatgattgtgccactccactccagcaagaatgacagagctag i macFas5.chrUn_KE145888 C 0 C 0 e panTro5.chr10 16306 1438 + 135926727 I a score=338324.000000 s hg38.chr3_KI270784v1_alt 100318 337 + 184404 atcctgCGTACAAATAT-ACACATATTGTATATATTGTCAATGACCAGTCACAGGTCTTACAATGCTGTTTATACAACATGGTAAAAATGATGTTGACAAAGAAATTATCACAATAA---TAATAATAAAAGCCCTGTGTG-----TTATTATTTAAGTTGTTCATAAATTTAATGTAAATGAGGTAGAGTAATAAAGATCTGTAGACAAATCATGTCATTT-ATTTTTTTAATCTCAACATAATATAAC----t-tttttttttttttta-gacag-attctcactctgtcacccaggctggaatgcagtggctag-atctc-----ggctcactgcaacc--tccaccaccccggttcaa s panTro5.chr10 17744 328 + 135926727 ATCCTGTGTACAAATATTACACATATTGTATATATTGTCAATGACCAGTCACAGGTCTTACAATGCTG--TATACAATATGGTTAAAATAATGTTGCACAAGAAATTATCACAATAA---TAATAATAAAAGCCCTGTGTG-----------TTTAATTTGTTCATAAA-TTAATGTAAATGAGGTAGAGTAATAAAGATCTGTAGAC--ATCATGTCATTTAATTTTTTTAAT-TCAACAT-ATATAAC----t-tttttttttttttgaggacag---tc-cactctgtcacccaggctggaatgctgtggcgagcatctca----agctcactgcaaccctcccaccaccctggttcaa i panTro5.chr10 I 1438 I 879 s panPan2.chr12 80674665 336 - 135337776 atcctgtGTACAAATAT-ATACATATTGTATATATTGTCAATGACCAGTCACAGGTCTTACAATGCTGTTTATACAATACGGTAAAAATGGTGTTGACAAAGAAATTATCACAATAATATTAATAATCAAAGCCCAGTGTT-----ATATTATGTAAGTTGTTCATAAATTTAATATAAGTCAGGTAGAGAAATGAAGATCTGTAGACAAGTCATGTCATTT-ATTTTTAAAATCTCAACAT-----AAt----t-tttttctttttttga-gacaagagtctcactctttcacccaggctggagtgcagtggctcg-atctc-----agctcactgcaacc--tctaccaccctggttcaa i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 4784 338 + 508821 ctcctgtGTACAAATAT-ACACATATTGTATATACTGTCAATGACCAGTCACAGGTCTTACAATGCTGTTTGTACAATATGGTAAAAATGATGTTGACAAAGAAATTATCACAATAA---TAATAATAAAAGCCCCGTGTG--------TTATTAAAGTTGTTCATAAATTTAATGTAAATGAGGTACAGTAATAAAGATCTGTAGACAAATCATGTCATTT-ATTTTTTTAATCTCAACATAATATAGCttttt-tttttttttttttta-gacag-agtctcactctgttgcccaggctggaatgcagtggctag-atctc-----agctcactgcaacc--tccaccaccctagttcaa i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44649885 345 + 86207423 atcctgtGTACAAATAT-ACACATATTATATATATTGTCAATGACCAGTCACAGGTCTTACAGTGCTGTTTACACAATATGGTAAAAATGATGTTGACAAAGAAATTATCACAA------TAATAATAAAAGCCCTGTGTGTTATTTTATTATTTAAGTTGTTCATAAATTTAATGTAAATGAGGTAGAGTAATGAAGATCTGTAGACAAATCATGTCATTT-ATTTTTTTAATCTCAACATAATATAAC----TGtttttttttttttga-gacag-agtctcactctgttgcccaggctggagtgcagtggctag-atctcggctcggctcactgcaacc--tctaccaccctggttcaa i nomLeu3.chr21 C 0 C 0 s macFas5.chrUn_KE145888 26461 328 - 342590 gtcctgtGTACAAATAT-ATACATATTGTGTGTGTTGTCAATGACCAGTCATAGGTCTTACAATGCTGTTTATACAATATGGTAAAAATGATGCTGACAAAGAAAATATCACAA------TAATAATAAAAGACCAGTGTA---TTTTATTATGTAAGTTGTTCATAAATTTAATATAAAAGAGGTAGAGT-ATGAAGATCTGTAGACAAATCACGTCATTT---TTTAAAAATCTCAACATAAAAGAAC----t------ttttttttga-gatgg-agtctcactctgtcacccaggctggagtgcagtggctag-atctc-----ggctcactgcaacc--tctgccaccctggttcaa i macFas5.chrUn_KE145888 C 0 C 0 a score=80528.000000 s hg38.chr3_KI270784v1_alt 100655 98 + 184404 gcgattcctctgcctcagcctcccgagtaactgggattacaggttgctgccaccgtgcctggctaatttttgtatttttagtagagagggggtttcac s panPan2.chr12 80675001 98 - 135337776 gcaattcccctgcctcagcctccagagtagctgggattacatgtttctgccaccacgtctggctaatttttgtatttttagtagagacggggtttcac i panPan2.chr12 C 0 I 588 s gorGor5.CYUI01015884v1 5122 98 + 508821 gcgattcctctgcctcagcctcccaagtaactgggattacaggttcctgccaccgtgcctggctaatttttgtatttttagtagagacggggtttcac i gorGor5.CYUI01015884v1 C 0 I 589 s nomLeu3.chr21 44650230 98 + 86207423 gtgattcctctgcctcagcctcccaagtaactgggattacaggttcctgccaccgtgcctggctaatttttgtatttttagtagagacggggtttcac i nomLeu3.chr21 C 0 I 590 s macFas5.chrUn_KE145888 26789 98 - 342590 gcaattcccccgcctcagcctcccgagtaactgtgattataggttcctgccaccatgcgcggctaatttttgtatttttagtggagatggggtttcac i macFas5.chrUn_KE145888 C 0 I 589 e panTro5.chr10 18072 879 + 135926727 I a score=194096.000000 s hg38.chr3_KI270784v1_alt 100753 245 + 184404 ATATATTTTAATTAGAAAATTAAAATTTTAAACTTTCAGAGGAAGTGGTAGTAATATAAAACAG--GATATTTTT---------------------------------------------------ATA----------------ATAAGGAACTCTTATATT---------TTGCA---TATTATTCTCTCATCACCAAATAATGCTACCTAAAGTAATATACAACCAATTTAATAAGTTTAGTTTTAAAAAACACAAAATTACAAAACAATTAATACAATATTTGAAATCATGATGCATATTGCCAGCCTCCCTTCAGGTAAAG s panPan2.chr12 80675687 259 - 135337776 ATATGTTTTAATTAGAAAATTACAATTCTAAACTTTCAGAGGAAATGATAGTAATATAAAACAGAGGACATTTTT---------------------------------------------------ATA----------------ATAAGGAACTCTTATATTCTTAATATTTTGCAAATTATTATTCTCTCATCACCAAATAGTGTTACTTAAAGTAATATATAACCAATACAATAAGTTTAGTTTTAAAAAACACAAAATTACAAAACAATTAATACAATATTTGAAATCATGATGCATATTGCCAGCCTCCCTTCAGGTAAAG i panPan2.chr12 I 588 C 0 s gorGor5.CYUI01015884v1 5809 250 + 508821 ATATATTTTAATTAGAAAATTACAATTTTAAACTTTCAGAGGAAGTGGTAGTAATATAAAACAGAGGACATTTTT---------------------------------------------------ATA----------------ATAAGGAACTCTTATATT---------TTGCAAATTATTATTCTCTCATCACCAAATAGTGCTACCTAAAGTAATATACAACCAATTTAATAAGTTTAGTTTTAAAAAACACAAAATTATGAAACAATTAATACAATATTTGAAATCATGATGCATATTGCCAGCCTCCCTTCAGGTAAAG i gorGor5.CYUI01015884v1 I 589 C 0 s nomLeu3.chr21 44650918 249 + 86207423 ATATATTTTAATTAGAAAATTACAATTTTAAACTTTCAGAGGAAATGGTAGTAATATAAAACAGC-GGCATTTTT---------------------------------------------------ATA----------------GTAAGGAAGTCTTATATT---------TTGCAAATTATTATTCTCTCACCACCAAATAGTGTCACCTAAAGTAATATACGACCAATTTAATAAGTTTAGTTTTAAAAAACACAAAATTACAAAACAATTAATACAATATTTGAAATCATGATGCATATTGCCAGTCTCCCTTCAGGTAAAG i nomLeu3.chr21 I 590 C 0 s macFas5.chrUn_KE145888 27476 326 - 342590 ATATATTTTAATTAGAAAATTACAATTTTAAACTTTCAGAGGAAATGGTAGTAATATAAAACAGAGGACttttttttttaaagacagagtctcattctgtcgcccaggctggagtgcagtggcacgatAAACAGAGGACATTTTTATAAGGAACTCTTGTATTCTTAATATTTTGCAAATTATTATTTTCTCATCACCAAATAATGTTGCCTAAAGTAATATACAACCAGTTTAGTAAGTTTAGTTTTAAAACACACAAAATTACAAAACAATTAATACAATATTTGAAATCATGATGCATATTGCCAGCCTCCCTTCAGGTAAAG i macFas5.chrUn_KE145888 I 589 C 0 e panTro5.chr10 18072 879 + 135926727 I a score=736847.000000 s hg38.chr3_KI270784v1_alt 100998 625 + 184404 TTCTATTAACTCTACAAAAATTTTCTAAATGGCAGATGTTACATTTCCAGATAGCTTTGTGGTAACCAACACAGAATTGATTTATTAGTAATTTTTATATCACATTGAGACAAAATATTATTTGTGATAAA------TATTGTTACATATTTAAAACATCTCATGTATTAAGAAATCATACTTTAGATGGGGCcaagctggcctattagaagcagctgtggcctgcggctctcacggagagcagtaaaaactgcgagtgaattctgcaccttcagttgaggtatccaggttcttgcattgggactgactagccagacagctcgacccacagggagtgaggaaaagcaagtggggcgatggcccacccaggtgtggcacggagctaggggcgaccccactcacagccaagggaggcggtgagtgattgtgcgactctgcccgggaaaccatgcttctcccacggatctttgcaacctgcagatcaggaggtcccctggtaagctcag---ccatggccttgggtctgaagcacggagctgtgtggagtctgggcggaatgctcgctggctcactggggcatgcgtgaaagcccaggagttttgcatcctctgccccgagaattccagcaaagcgg s panPan2.chr12 80675946 610 - 135337776 TTCTATTAACTCTACAAAAACTTTATAAATGACAGATGATACCTTTCCAGATAGTTTTGTGGTAATCAAAAAAGAATTG----ATTAGCAATTTTTATATCACATTGAGACAAAACATTATTTGTGATAAATATCATTATTGTTATGTATTTAAAACAGCTCATGTATTAAGAAATCATACTTTAGATGGGGCCAAGCTGGCCGATCAGAAG--------------------CATGgagagcaatgaaaactgtgagtgaattctacaccttcaattgaggtatccaggttcttgcattgtgactgactaggcagacagctcaacccacagagagtgaggaaaagcaagtggggtgatggcccacccaggtgtggcatggagctaggggagcccccactcgcagccaagtgaggcggtgagtgattgtgcgactctgtgcgggaaaccatgcttctcccacggatctttgcaacctgcagattaggagatcccctcgtgggcccagccaccacggccttgggtctgcagcacagagctgtgtggagtctcggcggagtgctcgctggctcactcgggcatgcaccgaaacccaggagttttgcatactctgccctgagaattccagcaaagtgg i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 6059 623 + 508821 TTCTATTAACTCTACAAAAATTTTCTAAATGGCAGATGTTACATTTCCAGATAGCTTTGTGGTAACCAA-AAAGAATTGATTTATTAGCAATTTTTATATCACATTGAGACAAAATATTATTTGTGATAAA------TATTGTTACGTATTTAAAACATCTCATGTATTAAGAAATCACACTTTAGATGGggccaagctggcctattagaagcagctgtggcctgcggctctcacggagagcagtgaaaactgcgagtgaattctgcaccttcagttgagctatccaggttcttgcattgggactgactagccagacagctcgacccacagggagtgaggaaaagcaagtggggcgatggcccacccaggtgtggcatggagctaggggcg-ccccactcgcagccaagggaggcggtgagtgattgtgcgactctgcccgggaaaccatgcttctcccacggatctttgcaacctgcagatcaggaggtcccctggtgagctcag---ccatggccttgggtctgaagcacagagctgtgtggagtctgggcggaatgctcgctggctcactggggcatgcgtgaaagcccaggagttttgcatcctctgccccgagaattccagcaaagcgg i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44651167 619 + 86207423 TTCTATTAACTCTACAAAAATTTTATAAATGGCAGATGTTACATTTCCAGATAGCTTTGTGGTAACCAAAAAAGGATTT----ATTAGCAATTTTTATATCACATTGTGACAAAATATTATTTGTGATAAA--------CTGTTATGTATTTAAAACATCTCATGTATTAAGAAATCATATTTTAGATGGGGCcaagctggctgattagaagcagctgtggcctgcggctctcacggagagcagtgaaaactgcgagtgaattctgcaccttcaattgaggtatccaggttcttgcattgggactgactaggcagacagcttgacccacagggagtgaggaaaagcaagtggggcgatggtccacccaggtgtgacacggagctaggggagcccccagtcgcagccaagggaggcagtgagtgattatgcgactctgcccgagaaaccatgcttctcccacggaactttgcaacctgcagatcaggaggtcccctggtgagctcag---ccatggccttgggtctgaagcacagagctgtgtggagtctcggcggagtgctcgctggctcactggagcatgcatggaaacccaggagttttacatcctctgccccgagaattccagcaaagtga i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 31316 630 - 204787373 TTCTATTAACTCTACAAAATTTTTATAAATGGCAGACATTACATTTCCAGACAGTTTTGTGGTAACCAAAAAAGAATTGATTTATTAGCAATTTTTATATCACACTGAGACAAAATATTATTTGTGATAAATATCGTTATTGTTATGTATTTAAAACATCTCATGTATTAAGAAATCATACTTTAGATGGggtcaagctggccaattacaagcaactgtggcccgtggctctcaccgagagcagtgacaagtgcgagtgaattctgcaccttcagttgaggtatccaggttcttgcactgggactgactaggcagacagctcgacccacagagtgtgaggaaaagcaagtggggcgatggcccacccaggtg-ggcac-gagctaggggagcctccagtcgcagccaagggaggcggtgagtgagtgtgcgactctgctcgggaaaccacgcttctcccacggatcttggcaacctgcagatcaggaggtcccgtcgtaagcccagcccccatggcc-tgggtctgaagcacagagctgtgtggaggctcggcggagagctcgctggctcactggggcatgc-tggaaacccaggagttttgcctactctgccccaagaattccagcaaagcgg i rheMac8.chr2 N 0 C 0 s macFas5.chrUn_KE145888 27802 629 - 342590 TTCTATTAACTCTACCAAAATTTTATAAATGGCAGACATTACATTTCCAGACAGTTTTGTGGTAACCAAAAAAGAATTGATTTATTAGCAATTTTTATATCACATTGAGACAAAATATTATTTTTGATAAATATCGTTATTGTTATGTATTTAAAACATCTCATGTATTAAGAAATCATACTTTAGATGGggtcaagctggctgattacaagcaactgtggcccgtggctctcacggagagcagtgacaagtgcgagtgaa-tctgcaccttcagttgaggtatccaggttcttgcactgggactgactaggcagacagctcgacccacagggagtgaggaaaagcaagtggggcgatggcccacccaggtg-ggcac-gagctaggggagcccccagtcgcagccaagggaggcggtgagtgattgtgcgactctgctcgggaaaccacgcttctcccacggatcttggcaacctgcagatcaggaggtcccctcgtgagcccagcccccatggcc-tgggtctgaagcacagagctgtgtggagtctccgcggagagctcgctggctctctggggcatgc-tggaaacccaggagttttgtgtactctgccccaagaattccagcaaagcgg i macFas5.chrUn_KE145888 C 0 C 0 e panTro5.chr10 18072 879 + 135926727 I a score=199254.000000 s hg38.chr3_KI270784v1_alt 101623 92 + 184404 aagatacatccgtgcattcccctaggaagggggctgaatccagggagc-----------------------------------------caagtgacatcattctg-aggccccactcccacagcacctcacaa s panPan2.chr12 80676556 93 - 135337776 gagatacatgcatgcattcccctaggaagggggctgaatccagggagc-----------------------------------------caagtggcatcattctgtgggccccactcccacagcacgtcacaa i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 6682 92 + 508821 gagatacatccgtgcattcccctaggaagggggctgaatccagggagc-----------------------------------------caagtgacatcattctg-aggccccactcccacagcacctcacaa i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44651786 91 + 86207423 gagacaaatccatgcattcccctaggaaggggtctgaagccagggagc-----------------------------------------caagtgacatcattctg-agg-cccactcccacagcacctcataa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 31946 92 - 204787373 gagatacatccatgcattcccctaggaagggggctgaatccagggagc-----------------------------------------caagtgacgtcattctg-aggccccactcccacagtccctcacaA i rheMac8.chr2 C 0 I 4257 s macFas5.chrUn_KE145888 28431 133 - 342590 gagatacatccatgcattcccctaggaagggggctgaatccagggagccaagtgacgtcattctgagaccccactcccacagtccctcacaagTGACGTCATTCTG-AGGCCCCACTCCCACAGCACCTCACAA i macFas5.chrUn_KE145888 C 0 I 40 s cerAty1.NW_012001209v1 86044 93 - 1981259 aagatacatccatgcattcccctaggaaggggactgaatccagggagc-----------------------------------------cacatggcatcattctgtgggccccactcccacagcacgtcacaa i cerAty1.NW_012001209v1 N 0 I 5 s manLeu1.NW_012098222v1 97293 93 + 458990 aagatacatccatgcattcccctaggaaggggactgaatccagggagc-----------------------------------------cacgtggcatcattctgtgggccccactcccacagcacgtcacaa i manLeu1.NW_012098222v1 N 0 I 5 e panTro5.chr10 18072 879 + 135926727 I a score=113898.000000 s hg38.chr3_KI270784v1_alt 101715 78 + 184404 gt-----cccattggcttggaattccagctggccagtggcagcaggctggaggcagccggagatggaccgggttcccg--gggta s panPan2.chr12 80676649 85 - 135337776 gttaagacccattggcttagaattccagctggccagcagcagcaggctgaagacagccggagatggaccgagttcccggagggag i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 6774 78 + 508821 gt-----cccattggcttggaattccagcaggccagaggcagcaggctggagacagccggagagggaccgagttcctg--gggga i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44651877 79 + 86207423 ga-----cccattggctgggaattccagctggccagcggcagcaggctggagacagccagagatggaccaagttcccgg-gggga i nomLeu3.chr21 C 0 C 0 s macFas5.chrUn_KE145888 28604 78 - 342590 -----GACCCATTGGCTTGGAATTCCAGCTGGTGGGGGGCAGCAggctggagatagccggagatggacagagttccca--ggggg i macFas5.chrUn_KE145888 I 40 I 2 s cerAty1.NW_012001209v1 86142 78 - 1981259 -----ggcccattggcttggaattccagctggccagcagcagcaggctagaaacatccagagatggaccaagttcccg--gaggg i cerAty1.NW_012001209v1 I 5 I 2 s manLeu1.NW_012098222v1 97391 78 + 458990 -----ggcccattggcttggaattccagctggccagcagcagcaggctagaaacatccagagatggaccaagttcccg--gaggg i manLeu1.NW_012098222v1 I 5 I 2 e rheMac8.chr2 32038 4257 - 204787373 I e panTro5.chr10 18072 879 + 135926727 I a score=1511676.000000 s hg38.chr3_KI270784v1_alt 101793 660 + 184404 gggcagccactctatctgtggtttgagttggccgctctagcctgctggcaccagggaccaggaggagtcccccataacacagcacagctgctgtgactgatcgtggccgggctgcttctttaagtgagaccgaaatccatccctcctcaccgaacagggcctgcccatcggaa-tttaggaactccagccagagttctatggacagaactctgatttctccctgggatgaagtccccagggagaggggtagctgctgtctccccagttcagccgactgagcctttccagcctgctggctctggagactcctggcagtcaccacagcacacctgctctgccaaagggcagccacactgcttctttaagcagtccctgatcctgtttctcctgactgggcaagacctcccaacaggggtctccagacacctcctacaggagcgttccagctggcatcaagtcggtacctccttggactggtgctcccagaggaaggaacaggctgcgatctttgctgtttcgcagccttcactggtgatacctccaggtgcaggagagactgaggtgaccagggtccagagtggacccccagaaaaccacagcagacctagggaagagtggtctgtt----aaaaacaaacagaaagcaacacc------atcaacaaaaaag s panPan2.chr12 80676734 660 - 135337776 gggcagccgctatatctgtggtttgagttggccgctctagcccgttggcaccaaggaccaggaggagttccccataacacagcacaggtgctgtgcctgattgtggctagtctgcttctttaagtgagaacgcagtccatccctcctcactggacaggacctccccatcagaattttagcagctccagccagagttctatggacataactctgatttctccgtgggatgaagtccccagggagaggggtagctgctgtctccccggttcagctgacctagcctttccagcctgctggctctagagactcccgggggtcagcacagcacacctg-tctgccaaggggcagccagactgcttctttaagcagtccctgatcctgttcctcctgactgggtgagacctcccaaaagggatctccagacatctcctacaggagcattccagctggcatcaagtcagtagccccttggaatggtgctcccagagaaaggatcaggctgccatctttgctgttttgcaggcttcactggtgatacctccaggtgcaggagagactgaagtgactgaggtctagagtggacccccagaaaaccacagcagccctagggaagagtggtctgac----tgtcaaaaacagaaagcaacaac------atcaacaaaaaag i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 6852 664 + 508821 gggcagccactctatctgtggtttgagttggccactctagcctgctggcaccagggaccaggaggagtccccgataacacagcacagctgctgtgcctgatcgtggccaggctgcttctttaagtgagaccgaaatccatccctcctcaccgaacagggcctccccatcggaattttagcaactccagccagagttctatggacagaactctgatttctccctgggctgaagtccccagggagaggggtagctgctgtctccccagttcagccgactgagcctttccagcctgctggctctggagactcct-gcagtcaccacagcacacctgttctgccaaagggcagccagactgcttctttaagcagtccctgatcctgttcctcctgactgggcaagacctcccaacaggggtctccagacacctcctacaggagcgttccagctggcatcaagtcggtacctccttggactggtgctcccagaggaaggaacaggctgccatctttgctgtttctcagccttcactggtgatacctccaggtgcaggagagactgaggtgatgagggtccagagtggacccccagaaaaccacagcagccctagggaagagtggtctgaccgttaaaaacaaacagaaagcaacaac------atcaacaaaaaag i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44651956 670 + 86207423 gggcagccgctatgtctgtggtttgggttggctgctctagcctgctggcaccagggaccaggaggagttccccataacagagcacagctgctgagcctgatcgtggccaggctgcttctttaagtgagaccaaaatccatccctcctcactagacaaggcctccccatcggaattttagcaactccagccagagttctatggacagaactctgatttctccctgggatgaagtccccagggagaggggtagctgctgtctccccagttcagccgactgagcctttccggcctgctggctctggagactcctggggatcagcacagcacacttgctctgccaaagggcagccagactgcctcttcatgcagtccctgatcctgttcctcctgactgggcaagacctcccaacaggggtctccagacacctcctacaggagc-ttccagctggcattaagtgagtacccccttggactggtgctcccagaggaaagatcaggctgccatctttgctgtttcgcagccttcactggcgatacctccagatgcagcaaagactgaggtgatgaaggtcaagagtggaccaccagaaaaccacagcagccctagggaagagtggtctgactgttaaaaacaaacagaaagcaacaacaacaatatcaacaaaaaag i nomLeu3.chr21 C 0 C 0 s macFas5.chrUn_KE145888 28684 645 - 342590 gggcagccgctatatctgcggtttgagttggccactctagcctgctggcaccagggaccaggaggagttccccataacacagcacagctgctgtgctggattgtggccaggctgcttctttaagtgagaccgaaatccatccctcctcactggacagggcctccc--------------caactccagccatagttctgtggacagaactctcatttctccctgggatgaagtccccagggagaggggtagatgctgtctcccaagttcagccgacctagccttgccagcctgctggctctggagactcccggggatcagcacagcatacctgctctgccaaggggcagccagagtgcttctttaagcagtccctgatcctgttcctctcgactgggtaagaccactcaacaggggtccccagacacctcctacaggagcattccaactggcatcaagtcagtgcccccttgga-tggtgctcccagaggaaggatcaggctgccatttttgctgtttcacagccttcactggtgatacctctaggtgcaggagagactgaggcgactagggtccagagtggacccccaaaaaaccacagcagccctcgggaag-----------tgttaaaaacaaacagaaagcaacaacaacaatatcaacaaaaaag i macFas5.chrUn_KE145888 I 2 C 0 s macNem1.NW_012018355v1 86143 671 - 5309094 gggcagccgctatatctgtggtttgagttggccactctaacctgctggcaccagggaccaggaggagttccccataacatagcacagatgctgcgcctgattgtggccagtctgcatctttaagtgagaccgcaatccatccctcctcactggacaggacctccccatcagaattttagcaaatccagccagagttctatggacagaactctgatttctccctgggatgaagtccccagggagagggatagctgctatctccccagttcagccgacctagcctttccagcctgctggctctagagactcctgggcgtcaacacagcacacctgttctgccaaggggcagccagactgcttctttaagcagtccctgatcctgttcctcctgactgggcgagacctcccaacaggggtctccagacacctcctacagaagcattccaggtggcatcaagttggtatccccttggactcgtgctcccagaggaaggatcaggctaccatctttgctgttttgcagccttcactggtgatacctccaggtgcagaagaaactgaggtgactagggtctagagtggacccacagaaaaccacagcagccctagggaagaatggtctgactgttaaaaacaaacagaaagcaacaaaaacaatatcaacaaaaaaa i macNem1.NW_012018355v1 N 0 C 0 s cerAty1.NW_012001209v1 86222 671 - 1981259 gggcagtcgctatatctgtggtttgagttggccactctaacctgctggcaccagggaccaggaggagttccccataacatagcacagctgctgtgcctgattgtggccagtctgcatctttaagtgagaccacaatccatccctcctcactggacaggacctccccattagaattttagcaaatccagccagagttctatggacagaactctgatttctccctgggatgaagtccccagggagagggatagctgctatctccccagttcagccgacctagcctttccagcctgctggctctagagactcctgggcgtcaacacagcacacctgttctgccaaggggcagccagactgcttctttaagcagtccctgatcctgttcctcctgactgggtgagacctcccaacaggggtctccagacacctcctacagaagcattccaggtggcatcaagttggtatccccttggactcgtgctcccagaggaaggatcaggctaccatctttgctgttttgcagccttcactggtgatacctccaggtgcagaagagactgaggtgactagggtctagagtggacccacagaaaaccacagcagccctagaaaagagtggtctgactgttaaaagcaaacagaaagcaacaacaataatatcaacaaaaaag i cerAty1.NW_012001209v1 I 2 C 0 s manLeu1.NW_012098222v1 97471 671 + 458990 gggcagccgctatatctgtggtttgagttggccactctaacctgctggcaccagggaccaggaggagttccccataacatagcacagctgctgtgcctgattgtggccagtctgcatctttaagtgagaccgcaatccatccctcctcactggacaggacctccccattagaattttagcaaatccagccagagttctatggacagaactctgatttctccctgggatgaagtccccagggagagggatagctgctatctccccagttcagccgacctagcctttccagcctgctggctctagagactcctgggcgtcaacacagcacacctgttctgccaaggggcagccagactgcttctttaagcagtccctgatcctgttcctcctgactgggtgagacctcccaacaggggtctccagacacctcctacagaagcattccaggtggcatcaagttggtatccccttggactcgtgctcccagaggaaggatcaggctaccatctttgctgttttgcagccttcactggtgatacctccaggtgcagaagagactgaggtgactagggtctagagtggacccacagaaaaccacagcagccctagaaaagagtggtctgactgttaaaagcaaacagaaagcaacaacaataatatcaacaaaaaag i manLeu1.NW_012098222v1 I 2 C 0 e rheMac8.chr2 32038 4257 - 204787373 I e panTro5.chr10 18072 879 + 135926727 I a score=1006771.000000 s hg38.chr3_KI270784v1_alt 102453 589 + 184404 accccacaaaaaccccattcaaaggtcagcaatgtcaaaaatcaaaggtagataagcccacaaagatgagaaaacat-aacacaaaaacgctgaaaactcaaagaggcagaatgcctcttctcctctaaatgacaacaccacctccccagcaagggcacagaactgaccccaggctgagatggctgaattgacaaaagtaggctttaggaggtgggtaataacaaaccacactgagctaaaggagcacattctaacttaatgcaaagaagctaaaaatcataaaagaaattacagaaggtgataaccagaattattcagtttagagaggaacataactgacctgatggaggtgagaaacacaacacgagaacttcacaatgcaaccacaagtatcactagcagaataggccaagtggaggaaagaatctcagagcttcaaaaccatctgtc-----t--aagacaggaagag-agaatacagaaaaaagaccaaaaaagaatgaacaaaaccttcaagaaatatgggattatgtaaaaagactgaacctaagactgataagggtacctTGacccaccacgatcaagatggcttcatcc s panPan2.chr12 80677394 594 - 135337776 accccacaaaaaccccattcaagggtcagcaacatcaaagatcaaaggtagataagcccacaaagatgagaaagcatcaacacaaaaatactaaaaactcaaaaaggcagaatgcctcttctcctctaaatgacaacacaacctccccagcaagggcacagaactggctggaggctgagatggctgaattgacgaaagtaggctttagaaggtgggtaataacaaacttcactgagctaaaggaacacattctaacttaatgcaaagaagctaagaatcatttaaaaaa-tacatgagctgataactagaa-tattcagtttagagaggaacataactgacctgatggagctgaaaaacacaacatgagaacttcacaatgcaaccacaagtatcattagcagaataggccaagtggaggaaagaatctcagagcttgaaaactatctgtctgatat--aagacaggaatagaagaatagagaaaaaagaacaaaaaagaatgaacaaaaccttcaagaaatatgggattatgtaaaaagactaaacctaagactgataaggatacATTGatccaccatgatcaagatggcttcatcc i panPan2.chr12 C 0 C 0 s nomLeu3.chr21 44652626 590 + 86207423 accccacaaaagccccattcaaaggtcaacaacatcaaagatcaaaggtagataagcccacaaagctgaggaagcatcaacacacaaacggtgaaaactcaaaaaggcagaatgcctcttctcctctaaatgacaacaacacctccccagcaagggcacagaactgaccccaggctgagatggctgaattgacaaaagtaggctttaggaggtgggtaataacaaacctcactgagctaaagaagcacattctaacttaatgcaaggaagctaaaaatcataaaagaaattacagaagctgacaaccagaa-tattcagtttagagaggaacataactgacctgatggaggtgagaaacacaacacaagaacttcacaatgcaaccacaagtatcactagcagaataggccaagtggaggaaagaatctcagagcttcaaaactatctgtc-----t--aagacaggaagagaaacatagagaaaaaggaacaaaaaagaatgaacaaaacctacaagagatatgggattatgtaaaaagactgaacctaagactgataagggtacctTGacccaccacgatcaagatggcttcatcc i nomLeu3.chr21 C 0 C 0 s macFas5.chrUn_KE145888 29329 592 - 342590 accccacaaaaaccccattcaaaggtcagcaacatcaaagataaaagatagataagcccacaaagatgagaaagcatcaacacaaaaatgctgaaaactcaaaaaggcagagtgcctcttctcctctaaatgacaccaccacctccccagcaagggcacagaactgacccgaggctgagatggcttaattgacaaaaataggctttaagaggtgggtaataacaaacttcactgagctaaaggagcatgttctaacttaatgcaagg-agccaaaaatcatgaaagaa--tacggtagctgatacccagaa-cattcagtttagagagcaacataactgacctgatggagctgaaaaaaacaacaccagaacttcacaatgcaaccacaagtatcattagcagaatagcccacgtggaggaaagaatctcagagcttgaaaactgtctgtctgatat--aagataggaagaaaagaatagagagaaaagaactaaaaagaatgaacaaaaccttcaagaaatatgggattatgtaaaaaaactgaacataagactgataaggatacactgatctgccacaatcaaaatgacttcatcc i macFas5.chrUn_KE145888 C 0 I 13134 s macNem1.NW_012018355v1 86814 594 - 5309094 accccacaaaaaccccgttcaaagatcagtaatgtcaaagatcaaaggtagataaggccacaaagatgagaaagcatcaatacaaaaatgctgaaaactcaaaaaggcagaatgtctcttctcctctaaacgacaacaccacctccctagcaagggcacagaactggccggaggctgagacggctgaattgacaaaagtaggctttagaaggtgggtaataacaaacctcactgagctaaaggagcacattctaacttaaagcaaggaagctaagaatcat-aaaaaa--tacaggagctgataaccagaa-tattcagtttagagaggaacataactgacctgatggagctgaaaaacacaacatgagaacttcacaatgctaccacaagtatcatgagcaggataggccaagtggaggaaagaatctcagagcttgaaaactatctgtctgatataaaagacaggaagagaagaatagagaaaaaagaacaaaaaagaatgaacaaaaccttcaagaaatatggaattatgtaaaaagactgaacctaagactgataaggatacATTGGtccaccatgatcaaggtggcttcatcc i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 86893 595 - 1981259 tacccacaaaaaccccgttcaaagatcagcaatgtcaaagatcaaaggtagataaggccacaaagatgagaaagcatcaacacaaaaatgctgaaaactcaaaaaggcagagtgcctcttctcctctaaatgacaacaacatctccctagcaagggcacagaactggccggaggctgagatggctgaattgacaaaagtaggctttagaaggtgggtaataacaaacttcactgagctaaaggagcacattctaacttaaagcaaggaagctaagaatcataaaaaaa--tacaggagctgataaccagaa-tattcagtttagagaggaacataactgacctgatggagctgaaaaacacaacatgagaacttcacaatgctaccacaagtatcataagcaggaaaggccaagtggaggaaagaatctcagagcttgaaaactatctgtctgatataaaagacaggaagagaagaatagagaaaaaagaacaaaaaagaatgaacaaaaccttcaagaaatatgggattatgtaaaaagactgaacctaagactgataaggatacATTGatccaccatgatcaaggtggcttcatcc i cerAty1.NW_012001209v1 C 0 C 0 s manLeu1.NW_012098222v1 98142 595 + 458990 tacccacaaaaaccccgttcaaagatcagcaatgtcaaagatcaaaggtagataaggccacaaagatgagaaagcatcaacacaaaaatgctgaaaactcaaaaaggcagagtgcctcttctcctctaaatgacaacaacatctccctagcaagggcacagaactggccggaggctgagatggctgaattgacaaaagtaggctttagaaggtgggtaataacaaacttcactgagctaaaggagcacattctaacttaaagcaaggaagctaagaatcataaaaaaa--tacaggagctgataaccagaa-tattcagtttagagaggaacataactgacctgatggagctgaaaaacacaacatgagaacttcaccatgctaccacaagtatcataagcaggaaaggccaagtggaggaaagaatctcagagcttgaaaactatctgtctgatataaaagacaggaagagaagaatagagaaaaaagaacaaaaaagaatgaacaaaaccttcaagaaatatgggattatgtaaaaagactgaacctaagactgataaggatacATTGatccaccatgatcaaggtggcttcatcc i manLeu1.NW_012098222v1 C 0 C 0 e rheMac8.chr2 32038 4257 - 204787373 I e gorGor5.CYUI01015884v1 7516 0 + 508821 C e panTro5.chr10 18072 879 + 135926727 I a score=636009.000000 s hg38.chr3_KI270784v1_alt 103042 524 + 184404 ctgggatacaaaattggttcaacacaggcaaatctataaatgtaattcctcacatacacagaactaaacacaaaaacaacacgattatctcaacagatgcagaaaaggccttcaataaaattcaacatcccttcatgtc---aaaaactctcaataa---actagctattgaaggatcacacctcaaaataataagagccatatatgacaaacccacagccaatatcatactgaatgagcaaaagctggaagcattccccttgaaaactggcacaagacaaggatggcctctctcaccactcctattcaacatagtactggaatttctggccagggcaatcaggcaggagaaagaaataaaggtatttaaataggaagagaggaagtcaaattatggttgttagcagatgacatgatcctgtatctagaaaaccccatcatctcagcccaaaagcttcttaagctgatgaaccacatcaagagaatctcaggatacaaaatcaatgtgcaaaaatcgctagtattcctat s panPan2.chr12 80677988 523 - 135337776 ttgggatacgaggttgcttcaacataggcaaatctataaatgtaattcatcacataaacagaactaaacacaaaaacaatgtgattatctcaatagatgcagaaaatgccttcaataaaattcaacatcccttcatgttaaaaaaaactctcaataa---actagctattgaaggatcatacctcaaaataataagagccatacatgacaaacccacagccaatatcatactgaatgggcaaaatctgaaagtattctccttgaaaacaggcacaagacaaggatggcctctctcaccagtcctattcaacatagtattgaagtttctggccagggcaatcgggcaggagaaagaaataaaggtatttaaataggaagaaaggaagtcaaattatcttt----gcagatgacatgatcctgtgtctagaaaaccccatcatctcagcccaaaagcttcttaagctgataaaccacttcagcaaagtctcaggatacaaaatcaatgtgcaaaagttactagcattccaat i panPan2.chr12 C 0 C 0 s nomLeu3.chr21 44653216 524 + 86207423 ctgtgatacaaggttggttcaacacacgcaaatctataaatgtaagtcctcatataaacagaactaaacacaaaaacaacacaattatctcaacagatgaagaaaaggccttcaataaaattcaacatcccttcatgtc---aaaaactctcaataa---accagctgttgaaggatcacacctcaaaataacaagagccatatatgacaaacccacagccaatatcatactgaatgagcaaaagctggaagcattccccttgaaaagtggcacaaaacaagcatggcctctctcaccactcctattcaacatagtactggaatttctggccagggcaatcaggcaggagaaataaataaaggtatttaaataggaagagaggaagtcaaattatctttgtttgcagatgacatgatcctgtatctagaaaaccccatcatctcaccccaaaagcttcttaagctgatgaaccacatcaacagaatctcaggatacgaaatcagtgtgcaaaaattgctagtattcctac i nomLeu3.chr21 C 0 C 0 s macNem1.NW_012018355v1 87408 525 - 5309094 ctgggatacaaggtttcttcaacataggcaaatctataaatgtaattcatcacataaacagaactaaacacaaaaacagtgtgattatctcaaaagatacagaaaaggacttcaataaaattcaacatcccttcatgtt---aaaaactctcaataaactactagctattgaaggatcatatatcaaaataataagaaccatacatgacaaacccacagccaatatc-tactgaatgcgcaaaagctggaagctttctccttgaaaacaggcacaagacaaggatggtctctctcaccactcctattcaacgtagtagtgaaatttctggccagggcaattgggc-agaaaaaaaaataaaggagtttaaataggaagagaggaagtcaaattatctttttctgtagatgacatgatcctgtgtctgtaaaaccccatcatctcagctcaaaagcttcttaagctgataaaccacttcagcaaagtctcaggatacaaaatcaatgtgcaaaagtcactagcattcctat i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 87488 523 - 1981259 ctgggatacaagatttcttcaacataggcaaatctataaatgtaattcatcacataaacagaactaaacacaaaaagagtgtgattatctcaaaagatgcagaaaaggacttcaataaaattcaacatcccttcatgtt---aaaaactctcaataa---actagctattgaaggatcatacatcaaaataataagagccatacatgacaaacccacagccaatatc-tactgaatgggcaaaagctggaagcattctccttgaaaacaggcacaagacaaggatggcctctctcaccactcctattcaacatagtattgaaatttctggccagggcaatcgggcaagagaaagaaataaaggaatttaaataggaagagaggaagtcaagttatctttttctgcagatgacatgatcctgtgtctgtaaaaccccatcatctcagcccaaaagcttcttaagctgataaaccacttcagcaaagtctcaggatacaaaatcaatgtgcaaaagtcactagcagtcctat i cerAty1.NW_012001209v1 C 0 C 0 s manLeu1.NW_012098222v1 98737 523 + 458990 ctgggatacaaggtttcttcaacataggcaaatctataaatgtaattcatcacataaacagaactaaacacaaaaagagtgtgattatctcaaaagatgcagaaaaggacttcaataaaattcaacatcccttcatgtt---aaaaactctcaataa---actagctattgaaggatcatacatcaaaataataagagccatacatgacaaacccacagccaatatc-tactgaatgggcaaaagctggaagcattctccttgaaaacaggcacaagacaaggatggcctctctcaccactcctattcaacatagtattgaaatttctggccagggcaatcgggcaagagaaagaaataaaggaatttaaataggaagagaggaagtcaagttatctttttctgcagatgacatgatcctgtgtctgtaaaaccccatcatctcagcccaaaagcttcttaagctgataaaccacttcagcaaagtctcaggatacaaaatcaatgtgcaaaagtcactagcagtcctat i manLeu1.NW_012098222v1 C 0 C 0 e rheMac8.chr2 32038 4257 - 204787373 I e macFas5.chrUn_KE145888 29921 13134 - 342590 I e gorGor5.CYUI01015884v1 7516 0 + 508821 C e panTro5.chr10 18072 879 + 135926727 I a score=1825348.000000 s hg38.chr3_KI270784v1_alt 103566 1085 + 184404 acaccaacaacaggcaagtagagacccaaatcatgaatgaacttcattcacaattactacaaagagaataaaatacataggaatacagctaacaagcgaagtgaagaacctcttcaaggaggactacaaaccactgcccagagaaatcagataggacacaaacaaatggagaagcattccatgctcatggatacggaagaattaattcatgaaaatggccatagtgcccaaagtaatttataaaagaattcagtgctattcccattaaactaccaatgacattcttcacagaattagaagaaactattttacaattctcat-gaaccaaaaaagagcccaaatagccaagacaattctaagcgaaaagaacaaagctggaggcatcacactacccaaattcgaactatactataaggctacagtaaccaaaacagcatagtactcgtacaaaaacagatacatagaccaatgaaacagaatagagaactctgaaataagaccatacacatacaaccatctgatctttgacaaacctgacaaacacaagcaatggggaaaggattccttatttaataaatcatattgggaaaactggctagccatatgcagaaaactgaaactggacatcttccttataccttatacaaaaaaataactcaagatggaataaagacttaaacataagacctaaaaccataaaaaccctggaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaataaac--tcatcagagtgaacagacaacctacagattgggagaaaatgtttgcaatat----gtctgacaaagggctaataaccagaatctacaaagaacttaaacaaatttacaag---aaaaaaaaaaaccccatc-aaaaagtgggcaaaggaaacgaacagacacttctcaaaagaagacatttatgcggccaacaaacatat---g----aaaaaaagctcatcatcactggtcattagataaatgcaaatc s panPan2.chr12 80678511 1085 - 135337776 acagcaacaacaggcaagcaaagagccaaatcatgaatgaacttcattcacaattgctacaaagagaataaaatacctaggaatatagctaacaagagaaatgaaggacctcttca---aggactacaaaccactgctcagagaaatcagagaggacacaaacaaatggagaaacattccatgcttatgcata-ggaagaattaattcataaaaatggtcatactgcccaaagtaatttgtaaaataattcagtgctattcccattaaactaccattgacattcttcacagaattagaagaaactatttcaaaattcttatggaactaaaaaagagcccaaatagccaaaacaattctaagcaaaaagaacaaagctggaggcatcacagtacccaacttcaaactatactataaggctacagtaaccaaaacagcatggtactggtacaaaaacagacatatagaccaatggaacagaatagagaactcagaaataagaccatacacatacaatcatctga----taacaaacctgacaaacacaagcaatggggaaaagatcccttacttaataaatcacgttgggaaaactggctagccatatgcaggaaactgaaactgtacgtcttccttacaccttatac-aaaaattaactgaacatggattaaagatgtaaacataagacctaaaaccataaagactctagaagaaaacctaggcaatatcatttaggacataggcatgggcaaagacttcatgactaaaacaccaaaagcaatggtaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcaaagcaaaagaaactatcatcagagtgaacagacaacctacagaacgggagaaaatttttgcaatctatccatctgacagagggctaatatccagaatctacaaagaacttaaacaaatttacaag----aaaaaaacaaccccatc-aaaaagtgggcaaaggaaacaagcagacacttctcaaaagaagacatttatgtggccaacaaacatat---g-aaaaaaaaaaactcatcatcactggtcattagagaaatgcaaatc i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 7516 1082 + 508821 acaccaacaacaggcaagtagagagccaaatcatgactgaagttcattcacaattactacaaagagaataaaatacataggaatacagctaacaagcgaagtgaagaacctcttcaaggaggactacaaaccactgcccagagaaatcagataggacacaaacaaatggagaagcattccatgctcatggatacggaagaattaattcatgaaaatggccatagtgcccaaagtaatttataaaagaattcaatgctatt-ccattaaactaccaatgacattcttcacagaattagaagaaagtattttacaattctcat-gaaccaaaaaagagcccaaatagccaagacaattctaagcaaaaagaacaaagctgga-gcatcacactacccaacttcgaactatactataaggctacagtaaccaaaacagtgtggtactggtacaaaaacagacacatggaccaatgaaacagaatagagaactctgaaataagaccatacagatacaaccatctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattccttatttaataaatcatgttgggaaaactggctagccatatgcagaaaactgaaactggacatcttccttataccttatacaaaaaaataactcaagatggaataaagacttaaacataagacctaaaaccataaaaaccctggaagaaaacctaggcaataccattctggacataggcat-ggcaaaaactttatgactaaaacaccaaaagcaatgggaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaagtaaac--tcatcagagtgaacagacaacctacagattgggagaaaatttttgcaatct----gtctgacaaagggctaatatccagaatctacaaagaacttaaacaaatttacaag---aaaaaaaacaaccccacc-aaaaagtgggcaaaggaaacaaacagacacttctcaaaagaagacatttatgcggccaacaaacatat---g----aaaaagagctcatcatcactggtcattagataaatgcaaatc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44653740 1084 + 86207423 acaccaacaacagtcaagaagagagccaaatcatgaatgaacttcattcacaattgctacaaagagaataaaatacacaggaatacagctaacaagtgaagtgaagaacctcttcaaggaggactacaaaccactgcctagagaaatcagataggacacaaacaaatggagaagcatttcatgctcatggata---gggaattaattcattaaaatggccatactgcccaaagtaatttataaaagaattcagtgctatgcccattaaactaccaatgacattcttcacagaattagaataaactatcttacaattctcat-gaaccaaaaaagagcccaaatagccaagacaattctaagcaaaaagaacaaagctggaggcatcacactacccaacttcaaactatactatatggctacagcaaccaaaacagcacggtactggtacaaaaacagacacatagaccaacgaaacagaatagagaactctgaaatcagaccatacacatacaaccatctgatctttgacaaacctgacaagcacaagcgatggggaaaggattccttatttaataaatcatgttgggaaaactggctaaccacatgcagaaaactgaaactagacatcttccttacaccttatacaaaaaaataactcaaaatggaataaagatttaaacataagacctaaaaccatgaaaaccctggaagaaaacctaggcaataccattcaggacataggcatggacaaatactttatgaccaaaacaccaaaagcaacggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaataaactatcatcagagtgaacagacaacctacagattgggagaaaatttttgcaatct----gtctgacaaagggctaatatccagaatctacaaagaacttaaacaaatttacaag----aaaaaaacaaccccatc-gaaaactgggcaaaggaaactaacagacacttctcaaaagaagacatttatgcagccaacaaacatat---g---aaaaaaaagctcatcaacactggtcattagataaatgcaaatc i nomLeu3.chr21 C 0 C 0 s macNem1.NW_012018355v1 87933 1095 - 5309094 acaccaacaacaggcaagcagagagccaaatcatgaatgaacttcattcacaattgctacaaagagaataaaacgcctaggaatacagctaacaagagaaatgaaggacctcttcaaggagggctacaaaccactgctcagagaaatcagagaggacacaaacaaatggagaaacattccatggtcatggata-ggaggaattaattcatgaaaatggccatactgtcaaaagtaatttgtaaaataattcaatgttattcccattaaactaccattgatattcttcaaagaattagaagaagctattttaaaattcttatggaactaagcaggagcccaaatagtcaaaacaattctaagcaaaaagaacaaagctggaagcaccacactacccagcttcaaactatactgtaaggctacagtaaccaaaacagcacggtactggtacaaaaacagacacatagaccaatggaacataatggagaactcagaaataagaccattcacatacaaccatctga----tgacaaacctgacaaacagaagcaatggggaaaggatcccttatttaataaatcatgttgggaaaactggctagccatatgcaagaaactgaaaccgtacgtcttccttacaccttatac-aaaaattaactcaaggtggattaaagacttaaacataagacctaaaaccataaaaaccctagaagaaaacctaggcaatatcatttaggacataggcatgggcaaagacttcatgactaaaatgccaaaagcaatggtaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcagaagaaactgtcatcagagtgaacaggcaacatacagaatgggagaaaattttttcaatctatccatctgacaaagggctaatatccagaatctacaaagaacttaaacaaatgcacaagaaaaaaaaaaaaaa--ccgtcaaaaaagtgggcaaaggaaacaaagagacatttctcaaaagaagacatttatgtggccaacaaacatatataaaaaaaaaaaaaactcattatcactgttcattagagcaatgcaaatc i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 88011 1088 - 1981259 acaccaacaacaggcaagcagagagccaaatcatgaatgaacttcattcacaattgctacaaagagaataaaatacctaggaatacagctaacaggagaaatgaaggacctcttcaaggaggactacaaaccactgctcagagaaatcagagaggacacaaacaaatggagaaacattccatggtcatggata-ggaggaattaattcatgaaaatggccatactgccaaaagtaatttgtaaaataattcattgctattcccattaaactaccattgacatttttcaaagaattagaagaagctattttaaaattcttatggaactaagaaggagcccaaatagtcaaaacaattctaagcaaaaagaacaaagctggaagcatcacactacccagcttcaaactatactgtaaggctacagtaaccaaaacagcacagtactggtacaaaaacagacacatagaccaatggaacataatagagaactcagaaataagaccattcacatacaaccatctga----tgacaaacctgacaaacagaagcaaaggggaaaggatcccttatttaataaatcgtgttgggaaaactggctagtcatatgcaggaaactgaaactgtacatcttccttacaccttatac-aaaaattaactcaaggtggattaaagacttaaacataagacctaaaatcataaaaaccctagaagaaaacctaggcaatatcatttaggacaaaggcatgggcaaagacttcatgactaaaatgccaaaagcaaaggtaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcagaagaaactgtcatcagagtgaacaggcaacatacagaatgggagaaaattttttcaatctatccatctgacaaagggctaatatccagaatctacaaagaactt----aaatttacaagaaaaaaaaaaacaaccccgtcaaaaaagtgggcaaaggaaacaaagagacatttctcaaaagaagacatttatgcagccaacaaacatat-----gaaaaaaaaaactcattatcactgttcattagagaaatgcaaatc i cerAty1.NW_012001209v1 C 0 C 0 s manLeu1.NW_012098222v1 99260 1094 + 458990 acaccaacaacaggcaagcagagagccaaatcatgaatgaacttcattcacaattgctacaaagagaataaaatacctaggaatacagctaacaggagaaatgaaggacctcttcaaggaggactacaaaccactgctcagagaaatcagagaggacacaaacaaatggagaaacattccatggtcatggata-ggaggaattaattcatgaaaatggccatactgccaaaagtaatttgtaaaataattcattgctattcccattaaactaccattgacatttttcaaagaattagaagaagctattttaaaattcttatggaactaagaaggagcccaaatagtcaaaacaattctaagcaaaaagaacaaagctggaagcatcacactacccagcttcaaactatactgtaaggctacagtaaccaaaacagcacagtactggtacaaaaacagacacatagaccaatggaacataatagagaactcagaaataagaccattcacatacaaccatctga----tgacaaacctgacaaacagaagcaatggggaaaggatcccttatttaataaatcgtgttgggaaaactggctagtcatatgcaggaaactgaaactgtacatcttccttacaccttatac-aaaaattaactcaaggtggattaaagacttaaacataagacctaaaatcataaaaaccctagaagaaaacctaggcaatatcatttaggacaaaggcatgggcaaagacttcatgactaaaatgccaaaagcaatggtaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcggaagaaactgtcatcagagtgaacaggcaacatacagaatgggagaaaattttttcaatctatccatctgacaaagggctaatatccagaatctacaaagaacttaaacaaatttacaagaaaaaaaaaaaaaaccccgtcaaaaaagtgggcaaaggaaacaaagagacatttctcaaaagaagacatttatgcagccaacaaacatat---gaaaaaaaaaaaactcattatcattgttcattagagaaatgcaaatc i manLeu1.NW_012098222v1 C 0 C 0 e rheMac8.chr2 32038 4257 - 204787373 I e macFas5.chrUn_KE145888 29921 13134 - 342590 I e panTro5.chr10 18072 879 + 135926727 I a score=645347.000000 s hg38.chr3_KI270784v1_alt 104651 231 + 184404 aaaaccacagtgagataccatctcacaccagttagaatggcgattattaaaaagtaaggaaacaacagatgctgatgaggctgtggagaaataggaatgcttttacactgttggtaggagtgtaaattagttcagtcattatggaagacagtgtgacaattcctcaaggtt-------------------------cagcaatcccattacggggtatatacccaaagcattataaattattatactataaag--aca s panPan2.chr12 80679596 257 - 135337776 aaaaccacaatgagatgccatctcacaccagttagaatggtgattattaaaaagtcaggaaacaacagatgctggagagggtgtgga-aaatagaaacgcttttacactgttagtgggagtttaaattagttcaaaaattgtggaagacagtgtagcaattcctaaaggatctaaaaccagaaataccatttgacccagcaatcccattactgagtatatacccaaaggattataaatcattctactataaagacaca i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 8598 232 + 508821 aaaaccacaatgagatatcatctcacaccagttagaatggcgattattaaaaagtcaggaaacaacagatgctgatgaggctgtggagaaataggaatgcttttacactgttggtaggagtgtaaattagttcagtcattatggaagacagtgtgacaattcctcaaggtt-------------------------cagcaatcccattatggggtatatacgcaaagcattataaattattatactataaagacac- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44654824 258 + 86207423 aaaaccacaatgagataccgtctcacacctgttagaatggtgattattaaaaagtcagaaaacgacagttgctgatgaggctgtggagaaatagggatgcttttacactgttggtaggaatgtgaattagttcagtcattatggaagacagtgtgacaattcctcaaggatctagaaccagaaataccatttgacccagcaatcccattatggggtatatacacaaagcattataaattattatactataaagacaca i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 36295 253 - 204787373 aaaaccacaatgag--accatctcacaccagttagaatggtgattattaaaaattcaggaaacaacagatgctggagaagatgtaga-aaataggaatgcttttacactgttagtgggagtttaaattagttcaaatattgtggaagacagtgtggcgattcctcaaggatctagaacaagaaataccatttgactcaacaatcccattatttggtatatactcaaaggagtataaatcattctactgtaaagaca-- i rheMac8.chr2 I 4257 I 22 s macFas5.chrUn_KE145888 43055 253 - 342590 aaaaccacaatgag--accatctcacaccagttagaatggtgattattaaaaattcaggaaacaacagatgctggagaagatgtaga-aaataggaatgcttttacactgttagtgggagtttaaattagttcaaatattgtggaagacagtgtggcgattcctcaaggatctagaacaagaaataccatttgactcaacaatcccattacttggtatatactcaaaggagtataaatcattctactgtaaagaca-- i macFas5.chrUn_KE145888 I 13134 I 2 s macNem1.NW_012018355v1 89028 255 - 5309094 aaaattacaatgagataccacctcacaccagttagaatggtgattattaaaaagtcgggaaacaacagatgctggaaaggatgtgga-aaataggaatgcttttacactgttagtgggagtttaaattagttcaaaaattgtggaagacagtgtggcaattcctaaaggatctaaaaccagaaataccatttgacccagcaatcctattactgggtatatacccaaaggattataaatcaatcttctacaaagaca-- i macNem1.NW_012018355v1 C 0 I 2 s cerAty1.NW_012001209v1 89099 255 - 1981259 aaaattacaatgagataccacctcacaccagttagaatgatgattattaaaaagtcaggaaacaacagatgctggaaaggatgtgga-aaataggaacgcttttacactgttagtgggagtttaaattagtttaaaaattgtggaaaacggtgtggcaattcctaaaggatctaaaaccagaaataccatttgatccagcaatcccattactgggtatatacccaaaggattataaatcaatcttctacaaagata-- i cerAty1.NW_012001209v1 C 0 I 2 s manLeu1.NW_012098222v1 100354 255 + 458990 aaaattacaatgagataccacctcacaccagttagaatgatgattattaaaaagtcaggaaacaacagatgctggaaaggatgtgga-aaataggaacgcttttacactgttagtgggagtttaaattagtttaaaaattgtggaaaacagtgtggcaattcctaaaggatctaaaaccagaaataccatttgatccagcaatcccattactgggtatatacccaaaggattataaatcaatcttctacaaagata-- i manLeu1.NW_012098222v1 C 0 I 2 e panTro5.chr10 18072 879 + 135926727 I a score=-5209.000000 s hg38.chr3_KI270784v1_alt 104882 10 + 184404 tgcactgtat----------- s panPan2.chr12 80679853 9 - 135337776 tgcac-acat----------- i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 8830 10 + 508821 tgcactctat----------- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44655082 10 + 86207423 tgcactgtat----------- i nomLeu3.chr21 C 0 C 0 s macFas5.chrUn_KE145888 43310 20 - 342590 tacac-acatatttcagcatt i macFas5.chrUn_KE145888 I 2 C 0 s macNem1.NW_012018355v1 89285 11 - 5309094 tgcaa-acata---------t i macNem1.NW_012018355v1 I 2 C 0 s cerAty1.NW_012001209v1 89356 11 - 1981259 tgcaa-acata---------t i cerAty1.NW_012001209v1 I 2 C 0 s manLeu1.NW_012098222v1 100611 11 + 458990 tgcaa-acata---------t i manLeu1.NW_012098222v1 I 2 C 0 e rheMac8.chr2 36548 22 - 204787373 I e panTro5.chr10 18072 879 + 135926727 I a score=318315.000000 s hg38.chr3_KI270784v1_alt 104892 106 + 184404 gtttatttcagcactgttcacaatagcaaagacttggaaccaacccaaattcccatcaatgataaagtggataaagaaaatgtggcacatatacaccatggaatac s panPan2.chr12 80679862 105 - 135337776 gtttatttcagcactgttcacaatagcaaagacttgaaaccaacccaaatgcccatcgataatagactggataaagaaaatgtggcaaatataca-cagggaatac i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 8840 106 + 508821 gtttatttcagcactgttcacaatagcaaagacttggaaccaacccaaattcccatcaatgataaactggataaagaaaatgtggcacatatacaccatggaatac i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44655092 106 + 86207423 gtttacttcagcactgttcacaatagcaaagacttggaaccaacccaaattcccatcaatgataaattggataaagaaaatgtggcacatatacaccatggaatac i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 36570 106 - 204787373 gtttatttcagcattgttcacaatagcaaagacttggaaccaacccaaatgcccatcaataatagactggatttagaaaatgtggcaaatatacaccatggaatac i rheMac8.chr2 I 22 C 0 s macFas5.chrUn_KE145888 43330 106 - 342590 gtttatttcagcattgttcacaatagcaaagacttggaaccaacccaaatgcccatcaataatagactggatttagaaaatgtggcaaatatacaccatggaatac i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 89296 106 - 5309094 gtttatttcagcactgttcacaatagcaaagacttggaacccacccaaatgcccatcaataatagactggataaagaaaatgtgacaaacatacaccatggaatac i macNem1.NW_012018355v1 C 0 I 2 s cerAty1.NW_012001209v1 89367 106 - 1981259 gtttatttcagtactgttcacaatagcaaagacttggaacccacccaaatgcccatcaataatagactggataaagaaaatgtgacaaacatacaccatggaatac i cerAty1.NW_012001209v1 C 0 I 25 s manLeu1.NW_012098222v1 100622 106 + 458990 gtttatttcagtactgttcacaatagcaaagacttggaacccacccaaatgcccatcaataatagactggataaagaaaatgtgacaaacatacaccatggaatac i manLeu1.NW_012098222v1 C 0 I 25 e panTro5.chr10 18072 879 + 135926727 I a score=9314.000000 s hg38.chr3_KI270784v1_alt 104998 6 + 184404 tacaca s panPan2.chr12 80679967 6 - 135337776 tatgca i panPan2.chr12 C 0 I 18 s gorGor5.CYUI01015884v1 8946 6 + 508821 tacaca i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44655198 6 + 86207423 tatgca i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 36676 6 - 204787373 tatgca i rheMac8.chr2 C 0 I 18 s macFas5.chrUn_KE145888 43436 6 - 342590 tatgca i macFas5.chrUn_KE145888 C 0 I 18 s macNem1.NW_012018355v1 89404 6 - 5309094 tatgca i macNem1.NW_012018355v1 I 2 I 18 e cerAty1.NW_012001209v1 89473 25 - 1981259 I e manLeu1.NW_012098222v1 100728 25 + 458990 I e panTro5.chr10 18072 879 + 135926727 I a score=993448.000000 s hg38.chr3_KI270784v1_alt 105004 346 + 184404 tttatgtcctttccagggacatggatgaagctggaaaccatcattctcagcaaactaacacaagaaaagaaaaccaggccaggagcagtggctcatgcctgtagtctcagaactttgggaggctgaagtaggcagatcacctgaggtgaggagtttgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatagacacaattagccaggcatgttggcacatgcctgtaatcctagctacttgggaggctgaggcaggagagtcacttgaacccaggaggcagaggttgtggtaacccaagatcatgccattgcactccaacctgggcgacaagag s panPan2.chr12 80679991 346 - 135337776 tttatatcctttccagggacatggatgaagctggaaaccatcatgctcagcaaactaacacaagaaaagaaaatcaggccgggcaccctggctcatgcctgtaatcccagaactttgagaggctgaagtgggcagatcacctgaggtcgggagtttgagaccagcctgaccaacatggagaaaccaggtctctactaaaaatacaaaaaattagccaggcgtggtggcacatgcctgtaaacccatctacctggtaggctgaggcaggaggatagcttgaacccaggaggcagaggttgcaatgaactgagattatgccactgcaccccagcctgggcaacaagag i panPan2.chr12 I 18 I 62 s gorGor5.CYUI01015884v1 8952 346 + 508821 tttatgtcctttccagggacatggatgaagctggaaaccatcattctcagcaaactaacacaagaaaagaaaaccaggccaggagcagtggctcgtgcctgtagtctcagaactttgggaggccgaggtgggcagatcacctgaggtgaggagtttgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatacacacaattagccaggcatgttggcacatgcctgtaatcctagctacttgggaggctgaggcaggagagtcgcttgaacccgggaggcagaggttgcagtaacccaagatcatgccattgcactccaacctgggcaacaagag i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44655204 328 + 86207423 tttatgtcctttccagggacatggatgaagctggaaaccatcattctcagcaaactaacacaagaaaagaaaaccagaccaggggcagtggctcacacctgtagtctgagaactttgggaggccgaggtgg------------------ggagtttgagaccagcctgaccaacatggagaaactccgtctctactaaaaacacaaacaattagccaggaatgttggcacatgcctgtaatcatagctacttgggaggctgaggcaggagagtcacttggacccgggaggcagaggttgcggtaacccaagatcatgccattgtgctccaacctggacaaaaagag i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 36700 346 - 204787373 tttatgtcctttccagggacatagatgaagctggaaaccatcattctcagcaaactaacacaagaaaagaaaaccaggccaggcgcagtggctcatgcctgtaatcccagaactttgagaggctgaagcgggcagatcgcctgaggtcaggagtttgagaccagcctgaccaacatggagaaaccctgtctctactaaaaatacagaaaattagccaggtgtggtggcatatgcctgtaatcctagctacttgggaggctgaggctggaggatagcttgaacctgggaggcagaggttgcaataggctgagactgtgccattgcactccagcatgggcaataagag i rheMac8.chr2 I 18 C 0 s macFas5.chrUn_KE145888 43460 346 - 342590 tttatgtcctttccagggacatagatgaagctggaaaccatcattctcagcaaactaacacaagaaaagaaaaccaggccaggcgcagtggctcatgcctgtaatcccagaactttgagaggctgaagcgggcagatcgcctgaggtcaggagtttgagaccagcctgaccaacatggagaaaccctgtctctactaaaaatacagaaaattagccaggtgtggtggcatatgcctgtaatcctagctacttgggaggctgaggctggaggatagcttgaacctgggaggcagaggttgcaataggctgagactgtgccattgcactccagcatgggcaataagag i macFas5.chrUn_KE145888 I 18 C 0 s macNem1.NW_012018355v1 89428 346 - 5309094 tttatgtccttttcagggacatggatgaagctggaaaccatcatgctcagcaaactaacccaagaaaaggaaaccaggccaggcaccgtggctcatgcctgtaatcccagaactttgagaggctgaagtgggcagatcacctgaggttgggagtttgagaccagcctgaccaacgttgagaaaccccatctctactaaaaatacaaaaaaatagccaggcgtggtggcacatgcctgtaatctcagctacttgggaggctgaggcaggaagatagcttgaacccagtaggcagaggttgcaatgagctgagattgtgccattgcaccccagcctgggcaacaagag i macNem1.NW_012018355v1 I 18 C 0 s cerAty1.NW_012001209v1 89498 346 - 1981259 tttatgtccttttcagggacatggatgaagctggaaaccatcatgctcagcaaactaacccaagaaaaggaaaccaggccaggcaccgtggctcatgcctgtaatcccagaactttgagaggctgaagtgggcagatcgcctgaggttgggagtttgagactagcctgaccaacgttgagaaaccccatctctactaaaaatacaaaaaaatagccaggcgtggtggcacatgcctgtaatctcagctacttgggaggctgaggcaggaggatagcttgaacccagtaggcagaggttgcaatgagctgagattgtgccattgcaccccagcctgggcaacaagag i cerAty1.NW_012001209v1 I 25 C 0 s manLeu1.NW_012098222v1 100753 346 + 458990 tttatgtccttttcagggacatggatgaagctggaaaccatcatgctcagcaaactaacccaagaaaaggaaaccaggccaggcaccgtggctcatgcctgtaatcccagaactttgagaggctgaagtgggcagatcgcctgaggttgggagtttgagactagcctgaccaacgttgagaaaccccatctctactaaaaatacaaaaaaatagccaggcgtggtggcacatgcctgtaatctcagctacttgggaggctgaggcaggaggatagcttgaacccagtaggcagaggttgcaatgagctgagattgtgccattgcaccccagcctgggcaacaagag i manLeu1.NW_012098222v1 I 25 C 0 e panTro5.chr10 18072 879 + 135926727 I a score=684622.000000 s hg38.chr3_KI270784v1_alt 105350 333 + 184404 tgaaattttgtc---tcaaaaaaaaaagaaagaaaaagaaaaa-gaagaaaagaaaaccaaacactgcatgttctcactcataagtgggagttgaacaatgagaacacatgga-------------------cacagggaggggaacatcacacactggggcctgtcgggg-gtgggaggctgggggaggaatagcattaggagaaatacctaatgtagatgacaggttgacgggtgcagcaaaccaccatggcacgtgtatacctatgtaacaaacctgcatgctctgcccatgtatcccagaacttaaagtacaacaaagaaaaCTTTACATAAATGCATAAAGTCTAGAACAGC s gorGor5.CYUI01015884v1 9298 331 + 508821 tgaaattttgtc---tcaaaaaaaaaaaaaa-agaaagaaaaa-gaagaaaagaaaaccaaacactgcatgttctcactcataagtgggagttgaacaataagaacacatgga-------------------cacagggaggggaacatcacac--tggggcctgtcggggagtgggaggctgggggaggaatagcattaggagaaatacctaatgtagatgacaggttgatgggtgcagcaaaccaccatggcacgtgtatacctatgtaacaaacctgcatgctctgcccatgtatcccagaacttaaagtacaacaaagaaaaCTTTACGTAAATGCATAAAGTCTAGAACAGC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44655532 325 + 86207423 tgaaattttgtc---tcaaaaaa---------aaaaagaaaaa-gaagaaaagaaaaccaaatgctgcatgttcttactcataagtgggagttgaacaatgagaacacatgga-------------------cacagggaggggaacatcacacaccggggcctgttgaggggtgggaggctgggggaggaataacataaggagaaatacctaatgtagatgacaggttgatgggtgcagcaaaccaccatggcatgtgtatacctatgtaacaaacctgcatgttctgcccatgtatcccagaacttaaagtacaacaaagaaaaCTTTACATAAATGCATAAAGTCTAGAACAGC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 37046 339 - 204787373 tgaaacttcatc---aaaaaaaaaaaaagagga-----------aatgaaaagaaaaccaaaaaccgcatgttctcacttataagtgggagttgaacaatgagaccacatgggtatatacatgttctcctcccacaaggagggtaacatcacacaccggggcctgtctggggctggggggctgggggaggaatagcattaggagaaacacctaatgtagatgacgggttgatgggtgcagcaaaccaccatggcatgtctatatctaggtaacaaacctgcacaccctgcccctgtatcccagaacttaaagtataata----aaaaTTTAAATAAATGCATAAAGTCTAGTATAAC i rheMac8.chr2 C 0 C 0 s macFas5.chrUn_KE145888 43806 339 - 342590 tgaaacttcatc---aaaaaaaaaaaaagagga-----------aatgaaaagaaaaccaaaaaccgcatgttctcacttataagtgggagttgaacaatgagaccacatgggtatatacatgttctcctcccacaaggagggtaacatcacacaccggggcctgtctggggctggggggctgggggaggaatagcattaggagaaacacctaatgtagatgacgggttgatgggtgcagcaaaccaccatggcatgtctatatctaggtaacaaacctgcacaccctgcccctgtatcccagaacttaaagtataata----aAAATTTAAATAAATGCATAAAGTCTAGTATAAC i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 89774 338 - 5309094 tgaaactccatcatgaaaaaaaaaaaaagaagatgaagaagaagaaagaaaagaaaaccaaaaaccacatgttctcactcataagtgggagttgaacaatgggaacacatgga-------------------cacaaggaggggaacatcacatatcgaggcctgtctgggggtagggggctgggggaggaatagcattaggagaaatacctaatgtagattatgggttcatgggtgcagcaaaccaccatggtgtgtctatacctgtgtaacaaacctgcatgccctgcccatgtatcccagaacttaaagtataataaAACAAACTTTACATAAATGCATAAAGTCTAGTATAGT i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 89844 335 - 1981259 tgaaactccatc---atgaaaaaaaaaagaagacgaagaagaagaaagaaaagaaaaccaaaaaccacatgttctcactcataagtgggagttgaacaatgggaacacatgga-------------------cacaaggaggggaacatcacatatcggggcctgtctgggggtagggggctgggggaggaatagcattaggagaaatacctaatgtagattatgggttcatgggtgcagcaaaccaccatggtgtgtctatacctgtgtaacaaacctgcatgccctgcccatgtatcccagaacttaaagtataacaaAACAAACTTTACATAAATGCATAAAGTCTAGTATAGT i cerAty1.NW_012001209v1 C 0 C 0 s manLeu1.NW_012098222v1 101099 337 + 458990 tgaaactccatcat-gaaaaaaaaaaaagaagacgaagaagaagaaagaaaagaaaaccaaaaaccacatgttctcactcataagtgggagttgaacaatgggaacacatgga-------------------cacaaggaggggaacatcacatatcggggcctgtctgggggtagggggctgggggaggaatagcattaggagaaatacctaatgtagattatgggttcatgggtgcagcaaaccaccatggtgtgtctgtacctgtgtaacaaacctgcatgccctgcccatgtatcccagaacttaaagtataacaaAACAAACTTTACATAAATGCATAAAGTCTAGTATAGT i manLeu1.NW_012098222v1 C 0 I 296 e panPan2.chr12 80680337 62 - 135337776 I e panTro5.chr10 18072 879 + 135926727 I a score=125157.000000 s hg38.chr3_KI270784v1_alt 105683 54 + 184404 TAATATATTATAATGAAATATCAACTATAATCCCAGCTCAAAGAGAACACCATG s gorGor5.CYUI01015884v1 9629 54 + 508821 CAATATATTATAATGAAATGTCAACTATAATCCCATCTCAAAGAGAACACCATA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44655857 54 + 86207423 TAACATATTACAATGAAATGTCAACTGTAATCCCAGCTCAAAGAGAACACCATA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 37385 54 - 204787373 TAATATATTATAATGAAATGTCAACTATAATCCCAGCTCAAAGAGAATACCATA i rheMac8.chr2 C 0 C 0 s macFas5.chrUn_KE145888 44145 54 - 342590 TAATATATTATAATGAAATGTCAACTATAATCCCAGCTCAAAGAGAATACCATA i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 90112 54 - 5309094 TAATATATTATAATGAAATGTCAACTATAATCCAAGCTCAAAAAGAACATCACA i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 90179 54 - 1981259 TAATATATTATAATGAAATGTCAACTATAATCCAAGCTCAAAGAGAACATCACA i cerAty1.NW_012001209v1 C 0 C 0 s manLeu1.NW_012098222v1 101732 54 + 458990 TAATATATTATAATGAAATGTCAACTATAATCCAAGCTCAAAGAGAACATCACA i manLeu1.NW_012098222v1 I 296 C 0 e panPan2.chr12 80680337 62 - 135337776 I e panTro5.chr10 18072 879 + 135926727 I a score=514986.000000 s hg38.chr3_KI270784v1_alt 105737 187 + 184404 AAATTATGAAGGGCTTTCCACAAATCTCTAAATTTATGTCTTCATAAGATTACATTTCTATTTCTTCTTGAATAATTTCCTTATTTTAGCTATGATTTAGTGATAGTAAGATGGTAATTATGAGGAGAAACTT---CTCCCAACACGCCATTGAGAAAATTCTGCCTCATTTCACCACACACCAGAGTCT s panPan2.chr12 80680399 184 - 135337776 AAATTATGAAGACCTTTCCATAAATCTCTAAATTTATGTCCTCATAAGATTATATTTCTATTTCTTCTTAAATAATTTCCTTATTTTAGCTATGATTTAGTGATAGTAAGATGGTAATTATGAGGAGAAAATT---CT---AACACTCCATTGAGAATATTCTGCCTCATTTCACCACACACCTGAGTCT i panPan2.chr12 I 62 I 320 s gorGor5.CYUI01015884v1 9683 187 + 508821 AAATTATGAAGGGCTTTCCACAAATCTCTAAATTTATGTCTTCATAAGATTACATTTCTATTTCTTCTTGAATAATATCCTTATTTTAGCTATGATTTAGTGATAGTAAGATGGTAATTATGAGGAGAAACTT---CTCCCAACACTCCACTGAGAAAATTCTGCCTCATTTCACCACACACCAGAGTCT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44655911 184 + 86207423 AAATTATGAAGGGCTTTCCACAAATCTCTAAATTTATGTCCTCATAAGATTACATTTCTATTTCTTCTTGAATAATTTCCTTATTTTAGCTATGATTTAGTGATGGTAAGATGGTAATTATGAGAAGAACATT---CT---AACACTCCGTTGAGAAAATTCTGCCTCATTTCACCACACACCTGAGTCT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 37439 184 - 204787373 AAATTATGAAGTGCTTTCCACAAATTTCTAAATTTATGTCC---TAAGATTACATTTGTATTTCTTCTTGAATAATTTCCTTATTTTAGCTATGATTTAGTGATAGTAAGATGGTAGTTATGAGGAGAAAATTCTCCT---AACACTCCACTGAGAAAATTCTGCCTCATTTCACCACACACCTGAGTCT i rheMac8.chr2 C 0 C 0 s macFas5.chrUn_KE145888 44199 184 - 342590 AAATTATGAAGTGCTTTCCACAAATCTCTAAATTTATGTCC---TAAGATTACATTTGTATTTCTTCTTGAATCATTTCCTTATTTTAGCTATGATTTAGTGATAGTAAGATGGTAGTTATGAGGAGAAAATTCTCCT---AACACTCCACTGAGAAAATTCTGCCTCATTTCACCACACACCTGAGTCT i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 90166 184 - 5309094 AAATTAAGAAGGCCTTTCCACAAATCTCTAAATTTATGTCCTCATAAGATTATATATCTATTCCTTTATAAATAATTTCCTTATTTTAGCTATGATTTAGTGACAGTAAGATGGTAATTATGGGGAGAAAATT---CT---ATCACTCCATTGAGAAAATCCTGCCTCATTTCACCACACACCTGAGTCT i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 90233 177 - 1981259 AGATT---AAGGCCTTTCCACAAATCTCTAAATTTGTGTCCTCATAAGATTATATATCTATTTCTTT----ATAATTTCCTTATTTTAGCTATGATTTAGTGATAGTAAGATGGTAATTATGGGGAGAAAAAT---CT---ATCACTCCATTGAGAAAATCCTGCCTCATTTCACCACACACCTGAGTCT i cerAty1.NW_012001209v1 C 0 C 0 s manLeu1.NW_012098222v1 101786 184 + 458990 AGATTAAGAAGTCCTTTCCACAAATCTCTAAATTTGTGTCCTCATAAGATTATATATCTATTTCTTTATAAATAATTTCCTTATTTTAGCTATGATTTAGTGATAGTAAGATGGTAATTATGGGGAGAAAATT---CT---ATCACTCCACTGAGAAAATCCTGCCTCATTTCACCACACACCTGAGTCT i manLeu1.NW_012098222v1 C 0 C 0 e panTro5.chr10 18072 879 + 135926727 I a score=3276.000000 s hg38.chr3_KI270784v1_alt 105924 1 + 184404 T s panPan2.chr12 80680903 1 - 135337776 T i panPan2.chr12 I 320 C 0 s gorGor5.CYUI01015884v1 9870 1 + 508821 T i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44656095 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 37623 1 - 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chrUn_KE145888 44383 1 - 342590 T i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 90350 1 - 5309094 T i macNem1.NW_012018355v1 C 0 I 327 s cerAty1.NW_012001209v1 90410 1 - 1981259 T i cerAty1.NW_012001209v1 C 0 C 0 s manLeu1.NW_012098222v1 101970 1 + 458990 T i manLeu1.NW_012098222v1 C 0 I 322 e panTro5.chr10 18072 879 + 135926727 I a score=42820.000000 s hg38.chr3_KI270784v1_alt 105925 13 + 184404 AAGCAGTCACTTC s panPan2.chr12 80680904 13 - 135337776 AAGCAGTCACTTC i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 9871 13 + 508821 AAGCAGTCACTTC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44656096 13 + 86207423 AAGCAGTCACTTC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 37624 13 - 204787373 AAGCAGTCACTTC i rheMac8.chr2 C 0 C 0 s macFas5.chrUn_KE145888 44384 13 - 342590 AAGCAGTCACTTA i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 90678 13 - 5309094 AAGCAGTCACTTC i macNem1.NW_012018355v1 I 327 C 0 s cerAty1.NW_012001209v1 90411 13 - 1981259 AAGCAGTCACTTC i cerAty1.NW_012001209v1 C 0 I 335 s manLeu1.NW_012098222v1 102293 13 + 458990 AAGCAGTCACTTC i manLeu1.NW_012098222v1 I 322 C 0 e panTro5.chr10 18072 879 + 135926727 I a score=1213197.000000 s hg38.chr3_KI270784v1_alt 105938 417 + 184404 TAATGTAGCTGAACAATAGATCCTCACCCACCTGAGTCTATGAATTGAATCCACGTATGTGAGATAAGGCCCCCAAGGAGTGGTAATAAGCTGGGAATGCCATCAGCTCATCTTCCTTCAGGCCTATATTTGTCAT----------------------------------TG-------------------------------------------------------------------------TCACTTGTAGAAGCAGGACAGCCCTGGCGTTGGGGTTGGTAGAAACAGAGAG-TATCAAAGGGAAAACTGAACTTCCCTAATTTTTGGAAAACAGCAGATTGGAGACAGATGGGCTCCAGCATTATCCATGTGTGAGGTCATTGTCCCAGGCAGCCTTGCTCAGGACCACATTTCTTGTCAGCAAAACAGAAGTCAAACGATATTTCTACCTTCCAAGAGAACAGAACATAATGTCAGATTTTCTCATGGATTCCCACAAGTTCAAGAAAGTTTCGTGGC s panPan2.chr12 80680917 416 - 135337776 TAATGCAGCTAAATAATAGATACTCACCCAGCTGAGTCTATGAATTGAATCCATGTATGTGAGATAAGGCCCC-AAGGAGTGGTAATAAGCTGGGAATGCCATCAGCTCATCTTTCTTCAGGCCTGTATTTGTCAT----------------------------------TG-------------------------------------------------------------------------TCACTTGTAGAAGCAGGACAGCCCTGGCATTGGGATTGTTAGAAACAGAGAG-TATCAAAGGGAAAACTGAACTCCCCTAATTTTTGGAAAACAGCAGATTGGAAAGAGATGGGCTCCAACGTTTTCCATGTATGAGGCCGTTGTCCCAGGTAGCCTTGCTCAGGACCACATTTCTTGTCAGCAAAACAGAAGTCAAACAGTATTTCTACTTTCCAAGAGAATAGAACATAATGTCAGATTTTCTCATGGATTCCCACCAGTTCAAGAAAGTTTCATGGC i panPan2.chr12 C 0 I 9567 s gorGor5.CYUI01015884v1 9884 417 + 508821 TAATGTAGCTGAACAATAGATCCTCACCCAGCTGAGTCTAGGAATTGAATCCACGTATGTGAGATAAGGCCCCCAAGGAGTGGTAGTAAGCTGGGAATGCCATCAGCTCATCTTCCTTCAGGCCTATATTTGTCAT----------------------------------TG-------------------------------------------------------------------------TCACTTGTAGAAGCAGGACAGCCCTGGCATTGGGGTTGGTAGAAACAGACAG-TATCAAAGGGAAAACTGAACTTCCCTAATTTTTGGAAAACAGCAGATTGGATACAGATGGGCTCCAGCATTTTCCATGTGTGAGGTCATTGTCCCAGGTAGCCTTGCTCAGGACCACATTTCTTGTCAGCAAAACAGAAGTCAAACGATATTTCTACCTTCCAAGAGAATAGAACATAATGTCAGATTTTCTCATGGATTCCCACAAGTTCAAGAAAGTTTCATGGC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44656109 411 + 86207423 TAATGTAGCTGAATAAGAGATACTCA-CCAGCTGAGTCTATGAGTTGAATCCGTGTATGTGAGATAAGGCCCCCAAGGAGTGGAAATAAGCTGGGAATGCCATCAGCTCATCTTCCTTCAGGTCTATATTTGTCAT----------------------------------TG-------------------------------------------------------------------------TCACTTGTAGAAGCAAGACAGCCCTGGCATTGGGGTTGTTAGAAACAGAGAG-TATCAAAGGGAAAGCTGAACTTCCCTAATTTTTGGAAAACAGCAGATTGGAAACAGATGGGCTCCTGCGTTT----TGTGTGAGGTCATTGTCCCAGGTAGCCTTG-TCAGGACCACATTTCTTGTCAGCAAAACAGAAGTCAAACGATATTTCTACCTTCCAAGAGAGTAGAACATAATGTCAGATTTTCTCATGGATTCCCACAAGTTCAAGAAAGTTTCATGGC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 37637 490 - 204787373 TAATGCAGCTGAATAACAGATCCTCACCCAGCTGAGTCTATGAATTGAATCCATGTATGTGAGATAAGGCCCCCAAGGAGTGGTAATAAGCTGGGAATGCCATCAGCTCATCTTCCTTCAGGTCTATA-TTGTCATTGTCCCCTGTAGAAGCAAGACAGCAAGCTGGGAATG----------------------------------CCATCAGTTCATCTTCCTTCAGGCCTATATTTGTCATTGTCACTTGTAGAAACAGGACAGCCCTGGCATTGGGATTGTTAGAAACAGACAGTTATCAAAGGGAAAACTGAACTTCCCTAATTTTTGGAAAACAGCAGGTTGGAAACAGATGGGCTCCAACCTTTTCCATGTGTGAGGTCATTGTCCCAGGTAGCCTTGCTCAGGACCACATTTCTTGTCAGCAAAACAGAAGTTAAACATTATTTCTACCTTCCAAGAGAAGAGAACATAATGTCAGATTTTCTCATGGATTCCCACAAGTTCAAGAAAGTTTCATGGC i rheMac8.chr2 C 0 C 0 s macFas5.chrUn_KE145888 44397 490 - 342590 TAATGCAGCTGAATAACAGATCCTTACCCAGCTGAGTCTATGAATTGAATCCATGTATGTGAGATAAGGCCCCCAAGGAGTGGTAATAAGCTGGGAATGCCATCAGCTCATCTTCCTTCAGGTCTATA-TTGTCAT----------------------------------TGTCCCCTGTAGAAGCAAGACAGCAAGCTGGGAATGCCATCAGTTCATCTTCCTTCAGGCCTATATTTGTCATTGTCACTTGTAGAAACAGGACAGCCCTGGCATTGGGATTGTTAGAAACAGACAGTTATCAAAGGGAAAACTGAACTTCCCTAATTTTTGGAAAACAGCAGGTTGGAAACAGATGGGCTCCAACCTTTTCCATGTGTGAGGTCATTGTCCCAGGTAGCCTTGCTCAGGACCACATTTCTTGTCAGCAAAACAGAAGTTAAACATTATTTCTACCTTCCAAGAGAAGAGAACATAATGTCAGATTTTCTCATGGATTCCCACAAGTTCAAGAAAGTTTCATGGC i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 90691 425 - 5309094 TAATGCAGCTGAATAATA----CTCACCCAGCTGAGTCTATGAATTAAATCCATGTATGTGAGATAAGGTCCCCAAGAAGTGGTAATAAGCTGGGAATGCCATCAGCTCATCTTCTTTCAGGCCTATATTTGTCAT----------------------------------TG----------------------------------------------------TCA---------TTGTCATTGTCACTTATAGAAGCAGGACAGCCCTGGCATTGAGATTGTTAGAAACAGAGTG-TATCAAAGGGAAAACTGAACTCCCCTAATTTTTGAAAAACAGCAGATTGGAAACAGATGGGTTCCAGCGTTTTCCATGTGTGAGGTCATTGTCCCAGGTAACCTTGCTCAGGACCACATTTCTTGTCAGCATAACAGAAGTCAAACAATATTTCTACCTTCCAAGAGAATAGAACATAATGTCAGATTTTCTCATGGATTCCCCCAAGTTCAAGACAGTTTCACGGC i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 90759 420 - 1981259 TAATGCAGCTGAATAATAGATACTCACCCAGCTGAGTCTATGAATTAAATCCATGTGTGTGAGATAAGGCCCCCAAGAAGTGGTAATAAGTTGGGAATGCCATCAGCTCATCT---TTCAGGCCTATATTTGTCAT----------------------------------TG-------------------------------------------------------------------TCATTGTCACTTATAGAAGCAGGACAGCCCTGGCATTGAGATTGTTAGAAACAGAGCG-TATCAAAGGGAAAACTGAACTCCTCTAATTTTTGAAAAACAGCAGATTGGAAACAGATGGGTTCCAGCGTTTTCCATGCGTGAGGTCATTGTCCCAGGTAACCTTGCTCAGGACCACATTTCTTGTCAGCATAACAGAAGTCAAACAATATTTCTACCTTCCAAGAGAATAGAACATAATGTCAGATTTTCTCATGGATTCCCCCAAGTTCAAGACAGTTTCATGGC i cerAty1.NW_012001209v1 I 335 C 0 s manLeu1.NW_012098222v1 102306 429 + 458990 TAATGCAGCTGAATAATAGATACTCACCCAGCTGAGTCTATGAATTAAATCCATGTATGTGAGATAAGGTCCCCAAGAAGTGGTAATAAGCTGGGAATGCCATCAGCTCATCTTCTTTCAGGCCTATATTTGTCAT----------------------------------TG----------------------------------------------------TCA---------TTGTCATTGTCACTTATAGAAGCAGGACAGCCCTGGCATTGAGATTGTTAGAAACAGAGCG-TATCAAAGGGAAAACTGAACTCCCCTAATTTTTGAAAAACAGCAGATTGGAAACAGATGGGTTCCAGCGTTTTCCATGTGTGAGGTCATTGTCCCAGGTAACCTTGCTCAGGACCACATTTCTTGTCAGCATAACAGAAGTCAAACAATATTTCTACCTTCCAAGAGAATAGAACATAATGTCAGATTTTCTCATGGGTTCCCCCAAGTTCAAGAAAGTTTCATGGC i manLeu1.NW_012098222v1 C 0 C 0 e panTro5.chr10 18072 879 + 135926727 I a score=7896.000000 s hg38.chr3_KI270784v1_alt 106355 3 + 184404 CTT s gorGor5.CYUI01015884v1 10301 3 + 508821 CTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44656520 3 + 86207423 CTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 38127 3 - 204787373 CTT i rheMac8.chr2 C 0 I 8213 s macFas5.chrUn_KE145888 44887 3 - 342590 CTT i macFas5.chrUn_KE145888 C 0 I 1 s macNem1.NW_012018355v1 91116 3 - 5309094 CTT i macNem1.NW_012018355v1 C 0 I 14584 s cerAty1.NW_012001209v1 91179 3 - 1981259 CTT i cerAty1.NW_012001209v1 C 0 I 9653 s manLeu1.NW_012098222v1 102735 3 + 458990 CTT i manLeu1.NW_012098222v1 C 0 I 9981 e panPan2.chr12 80681333 9567 - 135337776 I e panTro5.chr10 18072 879 + 135926727 I a score=2184.000000 s hg38.chr3_KI270784v1_alt 106358 4 + 184404 ATTT s gorGor5.CYUI01015884v1 10304 4 + 508821 ATTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44656523 4 + 86207423 ATTT i nomLeu3.chr21 C 0 C 0 s macFas5.chrUn_KE145888 44891 4 - 342590 ATTT i macFas5.chrUn_KE145888 I 1 I 8203 e cerAty1.NW_012001209v1 91182 9653 - 1981259 I e rheMac8.chr2 38130 8213 - 204787373 I e manLeu1.NW_012098222v1 102738 9981 + 458990 I e macNem1.NW_012018355v1 91119 14584 - 5309094 I e panPan2.chr12 80681333 9567 - 135337776 I e panTro5.chr10 18072 879 + 135926727 I a score=10829.000000 s hg38.chr3_KI270784v1_alt 106362 5 + 184404 AACTG s panPan2.chr12 80690900 5 - 135337776 AACTG i panPan2.chr12 I 9567 C 0 s gorGor5.CYUI01015884v1 10308 5 + 508821 AACTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44656527 5 + 86207423 AACTG i nomLeu3.chr21 C 0 C 0 s macFas5.chrUn_KE145888 53098 5 - 342590 AATTT i macFas5.chrUn_KE145888 I 8203 C 0 s macNem1.NW_012018355v1 105703 5 - 5309094 AACTG i macNem1.NW_012018355v1 I 14584 C 0 s cerAty1.NW_012001209v1 100835 5 - 1981259 AACTG i cerAty1.NW_012001209v1 I 9653 C 0 s manLeu1.NW_012098222v1 112719 5 + 458990 AACTG i manLeu1.NW_012098222v1 I 9981 C 0 e rheMac8.chr2 38130 8213 - 204787373 I e panTro5.chr10 18072 879 + 135926727 I a score=1059449.000000 s hg38.chr3_KI270784v1_alt 106367 327 + 184404 CTTAAGCATTTTAACT-AAAAAATTATTTGTCTTTCAAATACACAGGAATCTGTTTGGAAAAATTTTAACCAGAAAAAGTTGGAATTCTAAAGTAAAAAATGCATAAGGCCATCAAAATTTTTT-ACAGCTTTTAATTTAGATGTCAA-T---GGGGGAAAAAAAGACATTCTCTGAAGTTTGCTTTTATACCATTAAAGACTTATTTTTTATTACCAGCAATACAGGGCAACTCATTCAGGTTGAATCTTGAAGGTAAACTTTAACTTAATTATAAGTTTTGGCTAATTTTTAAGCATTTATCAGTCACCT-ACCATGATTTCATCTCAGAAA s panPan2.chr12 80690905 326 - 135337776 CTTAAGCATTTCAACT-AAAAAATCATTTGTCTTTCAAATACACAGGAATCTGTTTAGAAAATTTTTAACTAGAAAAAGTTGGAATTCTAAAGTAAAAAGTGCTTAAGGCCATAAAACTTTTTTTACAACTTTTAACTTAGATGTCAAGT---GGGGGAAAAAAC--CATTCTCTGAAGTTTGCTTTTATACCATTAAAGACTTATTTTT-ATTACCAGCAATACAGAGTGACTCATTCAGGTTGAATCTTGAAGGTAAACTTTAACTTAATTTTGAGTTTTCACTAATTTTTAAGAATTTCTCAGTCACCT-ACCATAATTTCATCTCAGAAA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 10313 326 + 508821 CTTAAGCATTTCAACT-AAAAAGTTATTTGTCTTTCAAATACACAGGAATCTATTTGGAAAAATTTTAACCAGAAAAAGTTGGAATTCTAAAGTAAAAAATGCATAAGGCCATCAAAATTTTTT-ACAGCTTTTAATTTAGATGTCAA-T---GGGGGAAAAAAA-ACATTCTCTGAAGTTTGCTTTTATACCATTAAAGACTTATTTTTTATTACCAGCAATACAGGGCAACTCATTCAGGTTGAATCTTGAAGGTAAACTTTAACTTAATTTTAAGGTTTGGCTAATTTTTAAGCATTTATCAGTCACCT-ACCATGATTTCATCTCAGAAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44656532 322 + 86207423 CTTAAGCATTTCAACTAAAAAAATTATTTGTCTTTCAAATACACAGGAATCTGTTTGGAAAAATTTTAACCAGAGAAAGTCAGAATTCTAAAGTAAAAAATGCATAAGGCCATCAAAATTTTTT-ACAGCTTTTAATTTAGATGTCAA-C---GGGGAAAAAA----CATTCTCTGAAGTTTGCTTTTATACCATTAAAGACTTATTTTTTATTACCAGCAATACAGGGTGACTCATTCAGGTTGAATCTTGAAGGTAAACTTTAAC--AATTTTAAGTTTTGGCTAATTTTTAAGCATTTATCAGTCACCT-ACCATGATATCATCTCAGAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 46343 327 - 204787373 CTTAAGCATTTCAACTAAAAAAATCATTTGTCTTTCAAATACATAGGAATATGTTTAGAAAAATTTTAACTAGAAAAAGTTGGAATTCTAAAGTAAAAAGTTCATAAGGCCAAAAAAATTTTTC-ACAGCTTTCAATTT-GATGTCAA-CTG-GGGGGAAAAAAA--CATTCTCTGAAGTTTGCTATTATACCATTAAACACTTACTTTTTATTACCAGCAATACAGAGTGACTCATTCAGGTTGAATCTTGAATGTAAACTTGAGCTTAATTTTAAGTTTTGGCTAATTTTTAAGCATTTCTCAATCACCT-ACCATGATTTCATCTCAAAAA i rheMac8.chr2 I 8213 C 0 s macFas5.chrUn_KE145888 53103 327 - 342590 CTTAAGCATTTCAACTAAAAAAATCATTTGTCTTTCAAATACATAGGAATATGTTTAGAAAAATTTTAACTAGAAAAAGTTGGAATTCTAAAGTAAAAAGTTCATAAGGCCAAAAAAATTTTTC-ACAGCTTTCAATTT-GATGTCAA-CTG-GGGGGGAAAAAA--CATTCTCTGAAGTTTGCTATTATACCATTAAACACTTACTTTTTATTACCAGCAATACAGAGTGACTCATTCAGGTTGAATCTTGAATGTAAACTTTAGCTTAATTTTAAGTTTTGGCTAATTTTTAAGCATTTCTCAATCACCT-ACCATGATTTCATCTCAAAAA i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 105708 303 - 5309094 CTTAAGCATTTCAACT-GAAAAATTATTTGTCTTTCAAATACACAGGAATCTGTTTAGAAAAATTTTAACTAGAAAAAGTTGGAATTCTAAAGTGAAAAGTGCCTAAGGCCATAAAATTTTTTT-ACATATTTTAATTTAGATGTCAA-CTGTGGGGGGAAAAAA--CATTCTCTGAAGTTTGCTTTTATACCATCAAAGACTTATTTTTTATTACCAGCAATACAGAGTGACTCATTCATGTTGAATTTTGAA-------------------------GTTGGCTAATTTTTAAGGATTTCTCAGTCACCT-ACCACGATTTCATCTCAGAAA i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 100840 303 - 1981259 CTTAAGCATTTCAACT-GAAAAATCATTTGTCTTTCAAATACACAGGAATCTGTTTAGAAAAATTTTAACTAGAAAAAGTTGGAATTCTAAAGTGAAAAGTGCCTAAGGCCATAAAATTTTTTT-ACAGATTTTAATTTAGATGTCAA-CTG-TGGGGAAAAAAA--CATTCTCTGAAGTTTGCTTTTATACCATCAAAGATTTATTTTTTATTACCAGCCATACAGAGTGACTCATTCATGTTGAATTTTGAA-------------------------GTTGGCTAATTTTTAAGGATTTCTCAGTCACCTAACCATGATTTCATCTCAGAAA i cerAty1.NW_012001209v1 C 0 C 0 s manLeu1.NW_012098222v1 112724 303 + 458990 CTTAAGCATTTCAACT-GAAAAATCATTTGTCTTTCAAATACATAGGAATCTGTTTAGAAAAATTTTAACTAGAAAAAGTTGGAATTCTAAAGTGAAAAGTGCCTAAGGCCATAAAATTTTTTT-ACAGATTTTAATTTAGATGTCAA-CTG-TGGGGAAAAAAA--CATTCTCTGAAGTTTGCTTTTATACCATCAAAGATTTATTTTTTATTACCAGCAATACAGAGTGACTCATTCATGTTGAATTTTGAA-------------------------GTTGGCTAATTTTTAAGGATTTCTCAGTCACCTAACCATGATTTCATCTCAGAAA i manLeu1.NW_012098222v1 C 0 C 0 s colAng1.NW_012114821v1 13838 326 + 20575453 CTTAAGCATTTCAACTAAAAAAATCTTGTGTCTTTCAAATACACAGGAATCTGTTTAGAAAAAATTTAACTAGAAAAAGTTGGAATTCTAAAGTAAAACGTGCATAAGGCCAAAAAAATTTTTC-ACAGCTTTCAATTT-GATGTCAA-CTG-GGGGGAAAAAAA---ATTCTCTGAAATTTGCTTTTATACCATTAAATACTTACTTTTTATTACCAGCAATACAGAGCAACTCATTCAGGTTGAATCTTGAAGGTAAACTTTAACTTAATATTAAGTTTTGGCTAATTTTTAAGCATTTCTCAATCACCT-ACCATGATTTCATCTCAAAAA i colAng1.NW_012114821v1 N 0 C 0 e panTro5.chr10 18072 879 + 135926727 I a score=803405.000000 s hg38.chr3_KI270784v1_alt 106694 182 + 184404 CCAAAATCTCAATTTCATTTAGACCTTTGAAATCTTAAAACAGAAAATTAAATGCTTCAAAATAATATTCATGTAGAGGCTTATATATGTGGACCAGGAATCTCCATGTATTACAAAGTTTATGAGAACATAACAAATGTTGATACACACATTTAATTCTTAAATAAAAACTTACAACAAAT s panPan2.chr12 80691231 181 - 135337776 CCAAGACCTCAATTTCATATAGACATTTGCAATATTAAAACAGAAGGTTAAATGCTTCAAAGCAATATTCATGTAAAGGCTTGCATATGTGGACCAGGAATCTCCATGTATTACAAA-TTTAAGAGAATATAACAAATGTTGATACACACATTTAATTCTGAAATAAAAATTTACAACAAAT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 10639 182 + 508821 CCAAAATCTCAATTTCATTTAGACCTTTGAAATATTAAAACAGAAGGTTAAGTGCTTCAAAATAATATTCATGTAGAGGCTTATATATGTGGACCAGGAATCTCCATGTATTACAAAGTTTATGAGAACATGACAAATGTTGATACACACATTTAATTCTAAAATAAAAACTTACAACAAAT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44656854 181 + 86207423 CCAAAATCTCAATTTAATTTAGACCTTCATAATATTAAAACAAAACGTTAAATGCTTCAAAATAATATTCATGTAGAGGCTTACATATGTGGAGCAGGAATCTCCATGTATTACAAAGTTTATGAGAACATAACAAATGTTGATACACACA-TTAATTCTGAAATAAAAACTTACAACAAAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 46670 181 - 204787373 CCAAAATCTCAATTTCATTTAGATATTTGGAATATTAAAACAGAAGGTTAAATGCTTCAAAATAATTTTCATGTAGAGGCTTACATATGCAGATCAGGAATCTCCATGTATTACAAAGTTTATGAGAACATAACAAATGTTAATACACACATTTAATTCTGAAAT-AAATCTTACAACAAAT i rheMac8.chr2 C 0 C 0 s macFas5.chrUn_KE145888 53430 181 - 342590 CCAAAATCTCAATTTCATTTAGATATTTGGAATATTAAAACAGAAGGTTAAATGCTTCAAAATAATTTTCATGTAGAGGCTTACATATGCAGATCAGGAATCTCCATGTATTACAAAGTTTATGAGAACATAACAAATGTTAATACACACATTTAATTCTGAAAT-AAATCTTACAACAAAT i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 106011 182 - 5309094 CCAAGATCTCAATTTCATGTAGACATTTGGAATATTAAAACGGAAGGTTAAATGCTTCAAAATAATATTCATGTAGAGGCTTGCATATGTGGACCAGGAATCTCCATGTATTACAAAGTTTATGGGAACATAACAAATGTTGATACACATATTTAATTCTGAAATAAAAACTTACAACAAAT i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 101143 182 - 1981259 CCAAGATCTCAATTTCATATAGACATTTGGAATATTAAAACAGAAGGTTAAATGCTTCAAAATAATATTCATGTAGAGGCTTGCATATGTGGACCAGGAATCTCCATGTATTACAAAGTTTATAAGAGCATAACAAATATTGATACACACATTTAATTCTGAAATAAAAACTTTCAACAAAT i cerAty1.NW_012001209v1 C 0 C 0 s chlSab2.chr12 12053 182 + 108555830 cCAAAATCTCAATTTCATTTAGACATTTGGAATATTAAAACAGAAGATTAAATACTTCAAAATAATTTTCATGTAGAGGCTTACATATGTGGACCAGAAATCTCCATGTATTACAAAGTTTATGAGAACATAACAAATGTTAATACATACATTTAATTCTGAAATAAAAACTTACAACAAAT i chlSab2.chr12 N 0 C 0 s manLeu1.NW_012098222v1 113027 182 + 458990 CCAAGATCTCAATTTCATATAGACATTTGGAATATTAAAACAGAAGGTTAAATGCTTCAAAATAATATTCATGTAGAGGCTTCCATATGTGGACCAGGAATCTCCATGTATTACAAAGTTTATAAGAGCATAACAAATGTTGATACACACATTTAATTCTGAAATAAAAACTTACAACAAAT i manLeu1.NW_012098222v1 C 0 C 0 s colAng1.NW_012114821v1 14164 180 + 20575453 CCAAAATCTCAATTTCATTTAGACATTTGGAATATTAAAACAGAAGGTTAAATGCTTCAAAATAATTTTCATGTAGAGGCTTACATATGCGGATCAGGAATCTCCATGTATTACAAAATTTATGAGAACATAACAAATGTTGATACATACATTTAATTCTGAAAT-AAATCTTACAACAAT- i colAng1.NW_012114821v1 C 0 C 0 e panTro5.chr10 18072 879 + 135926727 I a score=813356.000000 s hg38.chr3_KI270784v1_alt 106876 269 + 184404 AAAACTGTAACAAATCAAGAAAATTTTGTAGGTTTCACATTTTATGTCTAAAAATATAGGTATtaaacactcaaggatggataa---aagaaatcacaagagaaaacagaaaatatctagagacaaattaaaaatatgaaataccgaaagttaagagatacatcaaaaataataccataagggaaaaatgtatagctataaatgataataaaaaataagataccgaatcaacaactttact-----cctaaggaactaaaaacagagggaaaaaagg------- s panPan2.chr12 80691412 262 - 135337776 AAAATTGTAACAAATCAAGAGAATTCTGTAGGTTACACCTTTTATGTCTGAAAATATAGGTATTAAACACTCAAGGatggataaaagaagaaatcacaagagaaaacaggaaatatctagagacaaatgaaaaatatgaaataccaaaa---aagagatacatcaaaaa-agtaccataagagaaaaatttatagctacaaatgattataaa----aagatatcaaatcaacaacttaactttatacctaatgaactaaaaacagaggta-------------- i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 10821 262 + 508821 AAAACTGTAACAAATCAAGAAAATTTTGTAGGTTTCACATTTTATGTCTAAAAATATAGGTATtaaacactcaaggatggataa---aagaaatcacaagagaaaatagaaaatatctagagacaaattaaaaatatgaaataccgaaagttaagagatacatcaaaaacagtaccataagggaaaaatttatagctataaatgataataaaaaataagataccgaatcaacaactttact-----cgtaaggaactaaaaacagaggga-------------- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44657035 253 + 86207423 AAAACTGTAACAAATCAAGAAAATTTTGTAGGTTACACATTTTATGTCTAAAAATATAGATATTAAACCCTCAAGGatggataa---aagaaatcacaggagaaaatagaaaatatctagagacaaattaaaaatatgaaataccaa-----aagagatacatcaaaaaccatagcataagggaaagatttatatc----aatgattataaaaaataagataccgaatcaacaactttact-----cgtaaggaagtaaaaacagaggga-------------- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 46851 271 - 204787373 AAAATTGTAACAAATCAAGAAAATTCTGTAAGTTACACATTTTATATCTAAAAATACAGGTATtgaacactcaaggatggataaaagaagaaatcaca-----aaacagaaaatatctagagacaaattaaaaatatgaaacaccaaaagttaagagatatgtcaaaaacagtaccataagagaaaaatttatagctacaaatgattattaaaaa-aagacatcaaatcaacaacttaactttatacctaatgaactaaaaacagagtgg-------aaaagag i rheMac8.chr2 C 0 I 9 s macFas5.chrUn_KE145888 53611 271 - 342590 AAAATTGTAACAAATCAAGAAAATTCTGTAAGTTACACATTTTATATCTAAAAATACAGGTATtgaacactcaaggatggataaaagaagaaatcaca-----aaacagaaaatatctagagacaaattaaaaatatgaaacaccaaaagttaagagatatgtcaaaaacagtaccataagagaaaaatttatagctacaaatgattattaaaaa-aagacatcaaatcaacaacttaactttatacctaatgaactaaaaacagagtgg-------aaaagag i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 106193 274 - 5309094 AAAATTTTAACAAATCAAGAAAATTCTGTAGGTTACACATTTTATGTCTAAAAATACATGTATTAAACACTGAAGGatggataaaagaagaaatcacaagag-aaaaagaaaatatctacagacaaattgaaaatatgaaatactgaaagttaagagaca--tcaaaaacagtagcataagagaaaaatttatagccacaaatgattataaaaagtaggatatcaaattaaaaacttaactttatacctaacgaattaaaaccagaggga-------aaaggag i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 101325 260 - 1981259 AAAATTTTAACAAATCAAGAAAATTCTGTAGGATGCACATTTTATGTCTAAAAATACATGTATTAAACACTGAAGGatggataaaagaagaaatcacaagag-aaaaagaaaatatctagagacaaattgaaaatatgaaataccaaaagttaagagata--tcaa----agtagcataagataaaaatttatagctacaa---attataaaaagtaggatatcaaatcaacaacttaactttatacctaatgaattaaaaccagaagga-------------- i cerAty1.NW_012001209v1 C 0 C 0 s manLeu1.NW_012098222v1 113209 264 + 458990 AAAATTTTAACAAATCAAGAAAATTCTGTAGGATGCACATTTTATGTCTAAAAACACATGTATTAAACACTGAAGGatggataaaagaagaaatcacaagag-aaaaagaaaatatctagagacaaattgaaaatatgaaataccaaaagttaagagaca--tcaa----agtagcataagataaaaatttatagctacaa---attataaaaagtaggatatcaaatcaacaacttaactttatacctaacgaattaaaaccagaagga-------aaaa--- i manLeu1.NW_012098222v1 C 0 C 0 s colAng1.NW_012114821v1 14344 274 + 20575453 AAAATTGTAATAAATCAAGAAAATTCTGTAGGTTACACATTTTATGTCTAAAAATACAGGTATtgaacactcaaggatggataaaagaagaaatcacaagagaaaacagaaaatatttagagacaaattaaaaatatgaaataccaaaagttaagagagatgtcaaaaacagtaccataagagaaaaatttatagctacaaatgattataaaaaataagacatcaaatcaacaacttaactttatacctaatgaactaaaaacagagggg-------aaaa--- i colAng1.NW_012114821v1 C 0 C 0 e chlSab2.chr12 12235 0 + 108555830 C e panTro5.chr10 18072 879 + 135926727 I a score=-22651.000000 s hg38.chr3_KI270784v1_alt 107145 38 + 184404 ggactactaaaagaggga-caacta--aaagagggacaact s panPan2.chr12 80691674 16 - 135337776 --------aaaagaggga-----------------acaact i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 11083 29 + 508821 --------aaaagaggga----ctattaaagagagacaact i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44657288 30 + 86207423 --------aaaagaggga-caacta--aaagagggacaact i nomLeu3.chr21 C 0 C 0 s macFas5.chrUn_KE145888 53882 9 - 342590 ---------------gaaatgatg----------------- i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 106467 6 - 5309094 ---------------gga---act----------------- i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 101585 13 - 1981259 --------aaaagaggga---act----------------- i cerAty1.NW_012001209v1 C 0 C 0 s manLeu1.NW_012098222v1 113473 9 + 458990 ------------gaggga---act----------------- i manLeu1.NW_012098222v1 C 0 C 0 s colAng1.NW_012114821v1 14618 9 + 20575453 ------------gacgga---aca----------------- i colAng1.NW_012114821v1 C 0 I 3 e rheMac8.chr2 47122 9 - 204787373 I e chlSab2.chr12 12235 0 + 108555830 C e panTro5.chr10 18072 879 + 135926727 I a score=371453.000000 s hg38.chr3_KI270784v1_alt 107183 114 + 184404 aaaagctagcaaaattt----taaaaatgataaagatagcagtggaaataagtgaaatagagaacagaaaaacaatatc-aaaaatcaacaaaaccaagtttgttctctgaaaaa---gatc s panPan2.chr12 80691690 117 - 135337776 aaaagctagcaaaa-ta----aaaaaatgataaagatagcagtggaaataagtgaaatagagaatagaaaaacaatatcaaaaaatcaacaaaaccgagtttctgctctgaaaaatttcaac i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 11112 114 + 508821 aaaagctagcaaaattt----taaaaatgataaagatagcagtggaaataagtgaaatagagaacagaaaaacaatatc-aaaaatcaacaaaaccaagtttgttctctgaaaaa---gatc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44657318 111 + 86207423 aaaagctagcagaattt----aataaatgataaagacagcagtggaaataagtgaaatagaaaacagaag---aatatc-aaaaatcaacaaaaccaagtttgttctctgaaaaa---gatc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 47131 112 - 204787373 aaaagctagcaaaat------aaaaaatgataaagatagaagtggaaataagtgaaacagagaatagaaaaacaatatc-aaaaatcaacaaaaccaagtttgttctctgaaaaa---gttc i rheMac8.chr2 I 9 I 22 s macFas5.chrUn_KE145888 53891 112 - 342590 aaaagctagcaaaat------aaaaaatgataaagatagaagtggaaataagtgaaacagagaatagaaaaacaatatc-aaaaatcaacaaaaccaagtttgttctctgaaaaa---gttc i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 106473 112 - 5309094 aaaagctagcaaaatt---taaaaaaatgttaaagatagcagtggaaataagtgaaatagagaatagaaa---aatatc-aacaatcaacaaaaccaagtttgttctctgaaaaa---gttc i macNem1.NW_012018355v1 C 0 I 3 s cerAty1.NW_012001209v1 101598 115 - 1981259 aaaagccagcaaaattaaaaaaaaaaatgttaaagatagcagtggaaataagtgaaatagagaatagaaa---aatatc-aaaaatcaacaaaaccaagtttgttctctgaaaaa---gttc i cerAty1.NW_012001209v1 C 0 I 3 s manLeu1.NW_012098222v1 113482 114 + 458990 aaaagccagcaaaattaaaa-aaaaaatgttaaagatagcagtggaaataagtgaaatagagaagagaaa---aatatc-aaaaatcaacaaaaccaagtttgttctctgaaaaa---gttc i manLeu1.NW_012098222v1 C 0 I 3 s colAng1.NW_012114821v1 14630 112 + 20575453 aaaagctagcaaaat------aaaaaacgataaagatagcagtggaaataagtgaaacagagaacagaaaaacaatatc-aaaaatcaacaaaaccgagtttgttctctgaaaac---gttc i colAng1.NW_012114821v1 I 3 I 3 e chlSab2.chr12 12235 0 + 108555830 C e panTro5.chr10 18072 879 + 135926727 I a score=59766.000000 s hg38.chr3_KI270784v1_alt 107297 33 + 184404 aaaattgacaaaattttatatagattgactaag- s panPan2.chr12 80691807 32 - 135337776 aaaactgccaaacctttaactagattgcctaa-- i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 11226 32 + 508821 aaaactgacaaaattttatctagattgactag-- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44657429 32 + 86207423 gaaactgacaaaattttatctagatcgaccaa-- i nomLeu3.chr21 C 0 C 0 s macFas5.chrUn_KE145888 54003 23 - 342590 ----------aacctttaactcgattgactaa-g i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 106588 33 - 5309094 aaaactgacaaacctttaactagatggactaa-g i macNem1.NW_012018355v1 I 3 C 0 s cerAty1.NW_012001209v1 101716 33 - 1981259 aaaactgacaaacctttaactagatggactaa-g i cerAty1.NW_012001209v1 I 3 C 0 s manLeu1.NW_012098222v1 113599 33 + 458990 aaaactgacaaacctttaactagatggactaa-g i manLeu1.NW_012098222v1 I 3 C 0 s colAng1.NW_012114821v1 14745 33 + 20575453 aaaactgaaaaacctttaactagactgactaa-g i colAng1.NW_012114821v1 I 3 I 1 e rheMac8.chr2 47243 22 - 204787373 I e chlSab2.chr12 12235 0 + 108555830 C e panTro5.chr10 18072 879 + 135926727 I a score=355017.000000 s hg38.chr3_KI270784v1_alt 107330 114 + 184404 gaaaaaaagggaatactcaaattactaaactcaaaaataaaatgggtacattactaacaaatttttggagtaaaaaaaggatgcacgagagtaccataaggaactatacact-aa s panPan2.chr12 80691839 114 - 135337776 gaaaaaaaaagaatactcaaattacaaaactcaaaaataaaatgggtacattactaccaaatttttggagtaaaaaaagaatgtaagagactaccataagaaactgtacact-ta i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 11258 115 + 508821 ggaaaaaagggaatactcaaattactaaactcaaaaataaaatgggtacattactaacaaatttttggagtaaaaaaaggatgtacaagagtaccataaggaactatacactaaa i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44657461 114 + 86207423 gaaaaaaagggaatactcaaattactaaactcaaaaataaaatgggtacattactaacaaatttttggagtaaaaaaaggatgtaggagagcaccataaggaactacacact-aa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 47265 114 - 204787373 gaaaaaaagagaatattcaaattacaaaactc-aaaataaaatgagttcattactaccaaatttttggagtaaataaaggatgtaagagagtaccacaaggaatagtacactaaa i rheMac8.chr2 I 22 C 0 s macFas5.chrUn_KE145888 54026 113 - 342590 -aaaaaaagagaatattcaaattacaaaactc-aaaataaaatgagttcattactaccaaatttttggagtaaataaaggatgtaagagagtaccacaaggaatagtacactaaa i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 106621 111 - 5309094 -agaaaaa-agaatactcagattacaaaactcaaaaatcaaatgggtacattacta-caaatttttggagtaaaaaaggaatgtaagagagaaccataagaaactgtacact-ta i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 101749 112 - 1981259 -agaaaaa-agaatactcaaattacaaaactcaaaaatcaaatgggtacattactaccaaatttttggagtaaaaagagaatgtaagagggtaccataagaaactgtacact-ta i cerAty1.NW_012001209v1 C 0 C 0 s manLeu1.NW_012098222v1 113632 112 + 458990 -agaaaaa-agaatactcaaattacaaaactcaaaaatcaaatgggtacattactaccaaatttttggagtaaaaagagaatgtaagagagtaccataagaaactgtacact-ta i manLeu1.NW_012098222v1 C 0 C 0 s colAng1.NW_012114821v1 14779 112 + 20575453 aaaaaaaagagaacactcaaattac-aaactc-aaaataaaatgggttcattaccacccaatttttggagtaaataaaggatgtaagacagtaccataaggaattgtacatt-aa i colAng1.NW_012114821v1 I 1 C 0 e chlSab2.chr12 12235 0 + 108555830 C e panTro5.chr10 18072 879 + 135926727 I a score=2236181.000000 s hg38.chr3_KI270784v1_alt 107444 501 + 184404 aaaattgagtaacctaaataaaatgaacaaattcctag---aaacaaaaaacctactaagactgaatcagaacagttgaataaacctattcagcaaggagattcagcaggaagatggcataagtaatcaaaaacccagcaacaaagaaaagcctggaccagatggcttcactgttgaattctacccaacgtttaaagcagaattaacaccagtttttctcaaactttttcaaaacgttgaagaggaggtaatgttttctaacttattctatgaggccag-tattaccttgacaccaagccagacaaaggcaccataagaaaactacaaacaaacatcccttacaaatgctgatgcaaaaatcctcaacaaaataccagcaattcaaatttagcagtacattaaaaggatt------atacactatgaatgagtataattgactcctgaaataa----atgttccaacacatgaaaatcagcataatatcacattaacataaagaaggaaaaaacc s panPan2.chr12 80691953 512 - 135337776 aaaattgaataatctaaataaaatgaacaaattcctag---aaacaaaaaacctactaagactgaatcagaaaagttgaataaacctattcagcaaggagattcagcaagaagattgcatcggtaatcaaaaacccagcaacaaagaaaagcctggaccagatggtttcactgttgaattctactcaacgtttaaagcacaattaacaccagtttttctcaaactttttcaaaacgttgaagagggggtaacattttctaacttattctatgaggctacttattaccctgacaccaagccagacaaagacagcataagaaaactacaaacaaacattccttacaaatgctgatagaaaaatcctcaacaaaatatcagcaattcaaatttagcagtacattaaaaggattgaatgagtacactatgaatgagtataattgactcctgaaataaaagtatgttccaaaacatgataatccgtgtaatatcacattaacataaagaaggaaaaaacc i panPan2.chr12 C 0 I 47 s gorGor5.CYUI01015884v1 11373 505 + 508821 aaaattgaataacctaaataaaatgaacaaattcctag---aaacaaaagaactactaagactgaatcagaaaagttgaataaacctattcagcaaggagactcagcaagaagatgacatcagtaataaaaaacccagcaacaaagaaaagcctggaccagatggcttcactgttgaattctacccaacgtttaaagcagaattaacaccagtttttctcaaactttttcaaaacgttgaagagaaggtaacattttctaacttattctacgaggacag-tattaccccaacaccaagtcagacaaaggcaccataagaaaactacaaacaaacatcccttacaaatgccgatgcaaaaatcctcaacaaaataccagcaattcaactttagcagtacattaaaaggatt------atacactatgaatgagtataattgactcctgaaataaaagtatgttccaacacatcaaaatcagcataatatcacattaacataaagaaggaaaaaacc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44657575 508 + 86207423 aaaattgaataacctaaataaaatgaacaaattcctagggaaaaaaaaaaacctactaagactgaatcagaaaagttgaataaacctattcagcaaggagattcagcaggaagatggcatcagtaatcagaaacccagcaacaaagaaaagcctggaccagaaagcttcactgttgaattctacccaacgtttaaagcagaataaacaccagtttttctcaaactttttcaaaacgttgaagaggaggtaacattttctaacttattctatgaggccaa-tattaccctgacaccaagccagacaaaggtaccataagaaaactacaaacaaacatcccttacaaatgctgatgcaaaaatcctcagcaaaataccagcaattccaattttgcagtacattaaaaggatt------atacactatgaatgagcataattgactcctgaaataaaagtatgtttcaacacatgaaaatcagcgtaatatcacattaacataaaggaaaaaacgctc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 47379 481 - 204787373 aaaatcgaataacttaaataaaatgaacaaattcctag---aaacaaaaaacctactaa----------------------aaacctattcaacaaggagattcagcaagaagacggcatcagtaatcaaaaactcagcaacaaagaaaagcctggaccagatggcttcactgttgaattctacccaatgtttaaagcaaaattaatgccagtttttctcaaacttcttccaaacattgaagaggaggtaacattttctaacttattctatgaggctag-tattaccctgacaccaagccagacaaaggcaccataagaaaactacaaacaaacaccccttacaaatgctgatgcaaaaatcctcaacaaaataccagcaattcaaatttagtggtacattaaaaggatt------atacagtataaatgagtataattgactcctgaaataaaagtgtgttccaacacgtgaaaatctatgtaatatcgcattaacataa--gaagaaaaaacc i rheMac8.chr2 C 0 C 0 s macFas5.chrUn_KE145888 54139 481 - 342590 aaaatcgaataacttaaataaaatgaacaaattcctag---aaacaaaaaacctactaa----------------------aaacctattcaacaaggagattcagcaagaagacggcatcagtaatcaaaaactcagcaacaaagaaaagcctggaccagatggcttcactgttgaattctacccaatgtttaaagcaaaattaatgccagtttttctcaaactttttccaaacattgaagaggaggtaacattttctaacttattctatgaggctag-tattgccctgacaccaagccagacaaaggcaccataagaaaactacaaacaaacaccccttacaaatgctgatgcaaaaatcctcaacaaaataccagcaattcaaatttagtggtacattaaaaggatt------atacagtataaatgagtataattgactcctgaaataaaagtgtgttccaacacgtgaaaatctatgtaatatcgcattaacataa--gaagaaaaaacc i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 106732 504 - 5309094 aaaattgaataacctaaataaaatgaacaaattcctag---aaac-aaaaacctactaagactgaatcagaaaagttgaataaacctattcagcaaggagattcagcaagaagactgcatcagtaatcaaacacccagcaacaaagaaaagcctggaccagatggcttcactgttgaattctacccaaagtttaaaacaaaattaacaccagtttttctcaaactttttcaaagcattgaagaggatgtaacattttctaacttactctacgaggccag-tattaccctgacaccaagtcagacaaagacaccataagaaaactacaaacaaacatcccttacaaatgctgatgcaaaaatcctcaacaaaataccagcaattcaaatttagcagtgcattaaaaggatt------atacactatgaatgagtataattgactcctgaaataaaaatatgttccaacacatgaaaatcagtataatatcacattaacataaagaaggaaaaaacc i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 101861 504 - 1981259 aaaattgaataacctaaataaaatgaacaaattcctag---aaac-aaaaacctactaagactgaatcagaaaagttgaataaacctattcagcaaggagattcagcaagaagacagcctcagtaatcaaacacccagcaacaaagaaaagcctggaccagatggcttcactgttgaattctacccaaagtttaaaacaaaattaacaccagtttttctcaaactttttcaaagcattgaagaggatgtaacattttctaacttattctatgaggccag-tattaccctgacaccaagtcagacaaagacaccataagaaaactacaaacaaacatcccttacaaatgctgatgcaaaaatcctcaacaaaataccagcaattcaaattcagcagtgcattaaaaggatt------atacactatgaatgagtataattgactcctgaaataaaaatatgttccaacacatgaaaatcagtataatatcacattaacataaagaaggaaaaaacc i cerAty1.NW_012001209v1 C 0 C 0 s chlSab2.chr12 12235 504 + 108555830 Aaaattgaataacctaaataaaatgaacaaattcctag---aaacgaaaagcctaccaaaactgaaccagaaaagttgaataaacctactcagcaaggagattcagcaagaagatggcatcagtaatcaaaatctcagcaacaaagaaaagcctggaccagaggccttcactgttgaattctatccaatgtttaaagcaaaattaacaccagtttttctcaaactttttcaaaacgttgaagagaaggtaatattttctaacttattctattaagctag-tattaccctgacaccaagccagacaaaggcaccataagaaaactacaaacaaacatcccttacaaatgctgatgcaaaaatcctcaacaaaataccagcaattcaaatttggtggtacattaaaaggatt------atacactatgaatgagtataattgactcctgaaataaaagtatgttccaacacgtgagaatcagtgtaatatcacattaacataaagaa-gaaaaaacc i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012098222v1 113744 504 + 458990 aaaattgaataacctaaataaaatgaacaaattcctag---aaac-aaaaacctactaagactgaatcagaaaagttgaataaacctattcagcaaggagattcagcaagaagactgcgtcagtaatcaaacacccagcaacaaagaaaagcctggaccagatggcttcactgttgaattctacccaaagtttaaaacaaaattaacaccagtttttctcaaactttttcaaagcattgaagaggatgtaacattttctaacttattctatgaggccag-tattaccctaacaccaagtcagacaaagacaccataagaaaactacaaacaaacatcccttacaaatgctgatgcaaaaatcctcaacaaaataccagcaattcaaattcagcagtgcattaaaaggatt------atacactatgaatgagtataattgactcctgaaataaaaatatgttccaacacatgaaaatcagtataatatcacattaacataaagaaggaaaaaacc i manLeu1.NW_012098222v1 C 0 C 0 s colAng1.NW_012114821v1 14891 501 + 20575453 aaaattgaataacctaaataaaatg----aattcctag---aaacaaaaatcctactaagactgaatcagaaaagttgaataaacctattcagcaaggagattcagcaagaagatggcatcagtaatcaaaaactcagcaacaaagaaaagcctggaccagatggcttcactgttgaattctacccaatgtttaaagcaaaattaatgccagtttttctcaaactttttcaaaacgttgaagaggaggtaacattttctcacttattctatgaggctag-tattaccctcacaccaaactagacaaaggcaccataagaaaactacaaacaaacatcccttacaaatactgaagcaaaaatcctcaacaaaataccagcaattcaaatttagcagtacattaaaaggatt------atatactatgaatgagtataattgactcctgaaataaaagtatgttccaacatgtgaaaatcagtgtaatatcacattaacataaagaaggtaaaaacc i colAng1.NW_012114821v1 C 0 C 0 e panTro5.chr10 18072 879 + 135926727 I a score=619932.000000 s hg38.chr3_KI270784v1_alt 107945 182 + 184404 -tc--gtgatcaccttaatca---aagaaaaagcatttgtcaaaatttaacccacgttcatgataaaatacacttaataagctataaaaaggaataaaac-----aacataaggttatattt------aaaa---ac--------acacacagctaacattataatgaaagactgaaagcttttaccctaagagcaaaatcaaggatgcc s gorGor5.CYUI01015884v1 11878 190 + 508821 -tcatgtgatcatcttaatcaaagaagaaaaagcatttgtcaaaatttaacccacattcatgataaaatatacttaataagctataaaaaggaataaaacaccttaacataaggttatattt------aaaa---aca-------acacatagctaacttt---atgaaagactgaaagcttttaccctaagagcaaaatcaaggatgcc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44658083 188 + 86207423 ---atgtgatcatcttaatcaaagaagaaaaagcatttgtcaaaatttaacccacattcatgataaaatgttcttaataagctataaaaaggaataaagcaccttaacataaggttatataa------aaaa---aa--------acacacagctaacattattatg--agactgaaagcttttaccctaagagcaaaatcaaggattcc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 47860 207 - 204787373 ctcatgtgatcatcttaatcaaagaagaaaaagcatttgtcaaaatttaacccacatgcatgataaaatatacttaataaactataaaaaggaataaaacaccttaacataatgttatatttaaaaaaaaaa---acacacacacacacacagctaacattataatgaaatactgaaagcttttaccctaagagcaaaaacaaggaagcc i rheMac8.chr2 C 0 C 0 s macFas5.chrUn_KE145888 54620 206 - 342590 ctcatgtgatcatcttaatcaaagaagaaaaagcatttgtcaaaatttaacccacatgcatgataaaatatacttaataaactataaaaaggaataaaacaccttaacataatgttatattt-aaaaaaaaa---aaaaacacacacacacagctaacattataatgaaatactgaaagcttttaccctaagagcaaaaacaaggaagcc i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 107236 196 - 5309094 ctcatgtgatcat-ttaatcaaag----aaaagcatttgtcaaaatttaacccacattcatgataaaatatacttaataaactataaaaagaaataaaacaccttaacttaatgttatattt------taaa---acacacacacacacagagctaacattatggtgaaagactgaaagcttttaccctaagagtaaaaacaaggatgcc i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 102365 200 - 1981259 ctcatgtgatcat-ttaatcaaag----aaaagcatttgccaaaatttaacccacattcatgataaaatatacttaataaactataaaaagaaataaaacaccttaacttaatgttatattt--taaaacac---acacacacacacacagagctaacattatggtgaaagactgaaagcttttaccctaagagcaaaaacaaggatgcc i cerAty1.NW_012001209v1 C 0 I 122 s chlSab2.chr12 12739 201 + 108555830 ctcatgtgatcatcttaatcaaag---aaaaagcatttgtcaaaatttaacccacattcatgataaaatatacttaataaactataaaaaggaataaagcaccttaacataatgttatatta------aaaaaacacacacacacacacagagctaacattataatgaaagactgaaagcttttaccctaagagcaaaaacagggatgcc i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012098222v1 114248 197 + 458990 ctcatgtgatcatttaaatcaaag----aaaagcatttgtcaaaatttaacccacattcatgataaaatatacttaataaactataaaaagaaataaaacaccttaacttaatgttatattt------taaa---acacacacacacagagagctaacattatggtgaaagactgaaagcttttaccctaagagtaaaaacaaggatgcc i manLeu1.NW_012098222v1 C 0 C 0 s colAng1.NW_012114821v1 15392 199 + 20575453 ctcatgtgatcatcttaaagaaga----aaaagcatttgtcaaaatttaacccacattcatgataaaatatacttagtaaactataaaaaggaataaaacaccttagtataatgttatattt---tagaaaa---acaccca-gctaacacagctaacattataatgaaagactgaaagcttttaccctaagagcaaaaacaaggatgcc i colAng1.NW_012114821v1 C 0 C 0 e panPan2.chr12 80692465 47 - 135337776 I e panTro5.chr10 18072 879 + 135926727 I a score=3207079.000000 s hg38.chr3_KI270784v1_alt 108127 926 + 184404 tgcttttactacttctatttaatatagtactgaaggttctagttagttaaaacaataaggcaagtaaaataat-----aaaagatattccaatttttaaaaaagtaaaattttctgttcgcagatgacataactttatgtattaaaaatcttttagtttctgtgagataaactatcagatgcaataaataacattcagcaaaactgcaggatacaaaatcaagacacaaaaatcggttgtatttctacaat---aacaaactatctgaagaagaaatcaagacaacagtatcatgtatgatagcatcaaaagaat--aaaatacttagaagcccacttaaccaaggaaatgaaaaacctgtacagcaaaa-ctataaacattgcag-gaaagtattaaagatgacacaaataaatgaaaagacatcatgtgtttatggactggaagacaaaacctcatcaagacgccattgttatcaatagttatctacagattcaataaaatcactataaaaattccaatatttgcaaaaatagaaaaacctattctgaaattcagatgaaatct-caaaaaaccccaagtagccaaatcaatcttaaaaactaacaaagttagaggactaacacctcctggtttcaaacttactgcaatgcttcagtacccaaaacaatgctgtaccaccatagagacagacataaagaccaatgcaatagaaatagagaacc-aaaaaacacagtcatgatttttaacaagggagtaaaaactat------ggggaaaggacagtatatttttaaatggtgttaa-gaatgaatatttacatggaaaacaatacagttgg--acccttactttacaccatataaaaaacttaatttaaaatggactaaacatctaattgtaagagctaaaactataaaacccttagaag-aaacataggaaaaatgt s gorGor5.CYUI01015884v1 12068 921 + 508821 tgcttttactacttctctttaatatagtactgaaggttctagttagttaaaacaataaggcaagtaaaataat-----aaaagatattccaatttttaaaaaagtaaaattttctgttcacagatgacataatctta------aaaaatcttttagtttctgtgagataaactatcagatgcaataaataacattcagcaaaactgcaggatacaaaatcaacacacaaaagtcggctgtatttctacaat---aacaaactatctgaagaagaaatcaagacaacagtatcatttatgacagcatcaaaagaat--aaaatacttagaagccaacttaaccaaggaaatgaaaaacctgtacagcaaaa-ctataaacattgcag-gaaagcattaaagatgacataaataaatgaaaagacatcatgtgtttatggattggaagacaaaacctcatcaagatgccattgttatctatagtcatctacagattcaataaaatcactatacaaattccaatatttgcaaacatggaaaaacgtattctgaaattcagatgaaatct-ccaaaaaccccaagtagccaaatcaatcttaaaaactaacaaagttagaggactaacacctcctggtttcaaacttactgcaatgcttcagtacccaaaacaatgctgtaccagcatagagacagacataaagaccaatgcaatagaaataaagaaccaaaaaaacatggtcatgatttttaacaagggagtcaaaactgt-------gggaaaagacagtatatttttaaatggtgttaa-gaatgaatatttacatggaaaacaataaagttgg--acccttactttacaccatataaaaaacttaatttaaaatagactgaacatctaattgtaagagctaaaactataaaacccttagaagaaaacataggaaaaatgt i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44658271 924 + 86207423 tgcttttactacttctatttaatacagtactgaaggttctagttagttagaacaataaggcaagtaaaataat-----aaaagatattccaatttttaaaaaaataaaattttctgtttgcagatgacataatcttatatattaaaaatcttttagtttctgtgagataaactatcagatgcaataaataacattcagcaaaactgcaggatacaaaatcaacacacaaaaattggttttatttctacaat---aacaaactatctgaagaagaaatcaagagaacagtatcatt--tgatagca-caaaagaat--aaaatacttagaaaccaacttcaccaaggaaatgaaaaacctgtacagcaaaa-ctataaacattgcag-aaaagtattaaagatgacacaaataaatgaaaagacatca--tgtttacggactggaagacaaaaccttgtcaagatgccattgttatctatagtcatctacagattctataaaatcactacaaaaattccaatatttgcaaaaatagaaaaacctattctaaaattccaatgaaatct-caaaaaaccccaagtagccaaatcaatcttaaaaattaac--agttagaggactaacaactcctggtttcaagcttactgcagtgcttcagtacccaaaacaaggctgtgccagcatagagacagacataaagaccaatgcaacagaaataaagaacc-aaagaacacggtcatgatttttaacaagggtgtcaacactattcaat-agggaaaggacagtata-ttttaaatggtgttga-aaatgaatatttacatggaacacaataaagttgg--atccttactttacaccgtataaaaaacttaatttaaaatggacagaacatctaattgtaagcgctacaactataaaacccttagaagaaaacataggaaaaatgt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 48067 932 - 204787373 tgcttttactacttttacttaatatagtactgaacgttctagttagctaaaacaataaggcaagtaaaataat-----aaaagatattctgatatttaaaaaagtaaaattttctgttcacaaatgacataatcttatatattaaaaatcttttagtttctgtgagataaactatcagatgcaataaataacattcagcaaaactacaggatacaaaatcaacacacaaaaatcagttgtatttctacaat---aacaaactatctgaagaagaaatcaagacaacagtatcatttatgatagcgtcaaaaaaat--aaaatacttagaaactagcttaaccaaggaaatgaaaaacctgcatagcaaaacctataaacattgcag-aaaagtattaaaaatg--acaaataaatgaaaagacatcatatgtttatggattggaagacaaaaccttgtcaagatgccattgttatctatagtcacctacggattcaataaaatcactataaaaattctaatatttgaaaaaatagaaaattctattctaaaattcagatgaaatct-caaaaaaccccaagtagccaaatcaatcttaaaaactaacaaagttagagaactaacacctcctggtttcaaacttactgtaatgcttcagtgcccaaaatgatgttgtaccagcatagagacagacagaaagaccaatgcaatagaaaaaaagaacc-aaaaaatatggtcatgatttttaataagggagtcaaaactattcaatgggggaaaggacagtatattttttaatggtgttaa-aaatgagtatttacatggaaaccaataaagctgg--acccttattttacaccatataaaaaacttaatttaaaatggaccaaacatctaattgtaagagctaaaactataaaacccttagaagaaaacacatgaaaaatgt i rheMac8.chr2 C 0 C 0 s macFas5.chrUn_KE145888 54826 932 - 342590 tgcttttactacttttacttaatatagtactgaacgttctagttagctaaaacaataaggcaagtaaaataat-----aaaagatattctgatatttaaaaaagtaaaattttctgttcacaaatgacataatcttatatattaaaaatcttttagtttctgtgagataaactatcagatgcaataaataacattcagcaaaactacaggatacaaaatcaacacacaaaaatcagttgtatttctacaat---aacaaactatctgaagaagaaatcaagacaacagtatcatttatgatagcgtcaaaaaaat--aaaatacttagaaactagcttaaccaaggaaatgaaaaacctgcatagcaaaacctataaacattgcag-aaaagtattaaaaatg--acaaataaatgaaaagacatcatatgtttatggattggaagacaaaaccttgtcaagatgccattgttatctatagtcacctacggattcaataaaatcactataaaaattctaatatttgaaaaaatagaaaattctattctaaaattcagatgaaatct-caaaaaaccccaagtagccaaatcaatcttaaaaactaacaaagttagagaactaacacctcctggtttcaaacttactgtaatgcttcagtgcccaaaacgatgttgtaccagcatagagacagacagaaagaccaatgcaatagaaaaaaagaacc-aaaaaatatggtcatgatttttaataagggagtcaaaactattcaatgggggaaaggacagtatattttttaatggtgttaa-aaatgagtatttacatggaaaccaataaagctgg--acccttattttacaccatataaaaaacttaatttaaaatggaccaaacatctaattgtaagagctaaaactataaaacccttagaagaaaacacatgaaaaatgt i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 107432 934 - 5309094 tgcttttactacttctatttaatatagtactgaatgttctagttagttaaaacaataaggcaaataa---aat-----aaaagatactccaattttttaaaaattaaaattatctgttcgcagatgac--aatcttatatgttaaaaatcttttagtttctgtgagataaacagtcagatgcaataaataaaagtcagcaacactgcaggatacaatatcaatacacaaaaatcagctgtatttctacaatcacaataaactatctgaagaagaaatcaagacatcgatatcatttatgatagcgtagcatcaaa--agaatacttagaaaccaacttaaccaaggacatgaaaaacctgtacaggaaaaactataaacattgcagaaaaaatattaaagatgatacaaataaatgaaaagacatcatgtgttgatggattggaagacaaaagcttgtcaagatgccattgttttctatagtcatccatggattcaataaaatcactatgaaaattccaatatttgcaaaaatagaaaaacctattctaaaattcagataaaatct-caaaaaactccaagtagccaaatcaatcttaaaaactaacaaagtgagaggactaacacctcttggtttcaaacttactgcaatgcttcagtacccaaaacaatgttgtatcaacatagagacagacataaagaccaacgcaatagaaataaagaacc-aaaaaatgtggtcatgatttttaacaagggagccaaaactcttcaat-ggggaaaggacagtat-tttttaaatggtgttaacaaacaaatatttacatggaaaacaatgaagctggaaacccttactttacaccatataaaaaacttaatttcaaatggaccaaacatctaattgtaagagctgaaaccataaaacccttggaagaaaacataggaaaaaagt i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 102687 885 - 1981259 tgcttttactacttctatttaatatactactgaatgttctagttagttaaaacaataaggcaagtaa---aat-----aaaagatactccaatttttaaaaaagtaaaattatctgttcgcagatgac--aatcttatatgttaaaaatcttttagtttctgtgagataaacagtcagatgcaataaataaaattcagcaatactgcaggatacaatatcaatacacaaaaatcagctgtatttctacaattacaataaactatctgaagaagaa---------------------------------------------------agaaaccaacttaaccaaggacatgaaaaacctgtacaggaaaaactataaacgttgcagaaaaaatattaaagatgatacaaataaatgaaaagacatcatgtgtttatggattggaagacaaaaccttgccaagatgccattgttttctatagtcatccatggattcaataaaatcactatgaaaattccaatatttgcaaaaatagaaaaacccattctaaaattcagataaaatct-caaaaaactccaagcagccaaatcaatcttaaaaactaacaaagtgagaggactaacacctcttggtttcaaacttactgcaatgcttcagtacccaaaacgatgttgtatcaacacagagacagacataaagaccaatgcaatagaaataaagaacc-aaaaaatgtgatcatgatttttaacaagggagccaaaactattcaat-ggggaaaggacagtat-tttttaaatggtgttaacaaacgaatatttacatggaaaacaatgaagctggaaacccttactttacaccatataaaaaacttcatttcaaatggaccaaacatctaattttaagagctaaaactataaaacccttagaagaaaacatagggaaaaagt i cerAty1.NW_012001209v1 I 122 C 0 s chlSab2.chr12 12940 926 + 108555830 tgcttttactacttctatttaatatagtactgaaggttctagttagttaaaacaccaaggtgagtaa---aataataaaagatatattccaattttttaaaaagtagaattttctgttcgcagatgac--aaacttatatattaaaaatcttttagtttctgtgagataaactatcagatgcaataaataacattcagcaaaactgtgggatacaaaatcaacacacaaaaatcagttgtatttctataat---aacaaactatctgaagaagaaatcaagacaatagta----ttatga-----tagcatcagaataaaatacttagaaaccaacttaaccaaggaaatgaaaaacctgtacagcaaaaactataaacattgcag-aaaagtattaaagatgacacaaataaatgaaaagatatcatgtgtttatggaatggaagacaaaaccttgtcaagatgccattgttatctatagtcacctacagattcaataaaatcactataaaaattccaatatttgcaaaaatagaaaaacctattctaaaattcagatgaaatct-caaaaaaccccaagtaaccaaatcaatcttaaaaactaacaaagttagagaactaacacctcctggtttcaaacttactgtaatgcttcagtgcccaaaacgatgctgtaccagcatagagacagacataaagaccaatgcaatagaaaaaaagaacc-aaaaaatatggtcatgatttttaacaaggaagtcaaaactattcaat-ggggaaaggacagtatatttttaaatggtgttaa-aaatgaatatttacatggaaaccaataaagctgg--acccttgctttacaccatataaaaaacttaatttaaaatggaccaaacatctaactgtaagagctaaaactataaaacccttagaagaaaacacagggaaaatgt i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012098222v1 114445 934 + 458990 tgcttttactacttctatttaatatagtactgaatgttctagttagttaaaacaataaggcaagtaa---aat-----aaaagatactccaattttttaaaaattaaaattatctgttcgcagatgac--aatcttatatgttaaaaatcttttagtttctgtgagataaacagtcagatgcaataaataaaagtcagcaatactgcaggatacaatatcaatacacaaaaatcagctgtatttctacaatcacaataaactatctgaagaagaaatcaagacatcaatatcatttatgatagcgtagcatcaaa--agaatacttagaaaccaacttaaccaaggacatgaaaaacctgtacaggaaaaactataaacattgcagaaaaaatattaaagatgatacaaataaatgaaaagacatcatgtgttgatggattgaaagacaaaaccttgtcaagatgccattgttttctatagtcatccatggattcaataaaatcactatgaaaattccaatatttgcaaaaatagaaaaacctattctaaaattcagataaaatct-caaaaaactccaagtagccaaatcagtcttaaaaactaacaaagtgagaggactaacacctcttggtttcaaacttactgcaatgcttcagtacccaaaacaatgttgtatcaacatagagacagacataaagaccaatgcaatagaaataaagaacc-aaaaaatgtgatcatgatttttaacaagggagccaaaactattcaat-ggggaaaggacagtat-tttttaaatggtgttaacaaacgaatatttacatgaaaaacaatgaagctggaaatccttactttacaccatataaaaaacttcatttcaaatggaccaaacatctaattgtaagagctaaaactataaaacccttagaagaaaacataggaaaaaagt i manLeu1.NW_012098222v1 C 0 C 0 s colAng1.NW_012114821v1 15591 934 + 20575453 tgcttttactacttttacttaatacagtactgaagattctggttagctaaaacaataaggcaagtaaaataat-----aaaagatattctgatatttaaaaaagtaaaattttctgtttgcagatgacataatcttatatattaaaaatattttcatttctgtgagataaactatcagatgcaataaataacattcagcaaaactacaggatactaaatcaacacacaaaaatcagttgtgtgtctacaat---aacatactatctgaaaaggaaatcaagacaacagtatcatttatgatggtgtcaaaaaaat--aaaatacttagaaaccaacttaaccaaggaaatgaaaaacctgcatagcaaaaactataaacattgcag-aaaagtattaaagatgacacaaataaatgaaaagacatcatgtgtttatggattggaagacaaaaccttgtcaagatgccattgttatctatagtcacctacagattcaataaaatcactataaaaattccaatatttgaaaaaatagaaaatcctattctaaaattcagatgaaatctaaaaaaaaccccaagtagccaaattaatcttaaaaactaacaaagttagagaactaacacctcctggtttcaaacttactgtaatgcttcagtacccaaaacgatgttgtaccagcatagagatagacataaagaccaatgcagtagaaaaaaagaacc-aaaaaatatggtcatgatttttaacaagggagtcaaaactgttcaat-ggggaaaggatagtatatttttaaatggtgttaa-aaatgaatatttacatggaaaccaataaagctgg--acccttattttacaccatataaaaaacttaatttaaaatggaccaaacatctaattgtaagagctaaaactataaaacccttagaagaaaacacaggaaacatgt i colAng1.NW_012114821v1 C 0 C 0 e panPan2.chr12 80692465 47 - 135337776 I e panTro5.chr10 18072 879 + 135926727 I a score=517779.000000 s hg38.chr3_KI270784v1_alt 109053 128 + 184404 ttcataacatagaatctggcaataatttcttggatatgacagtgaaagcacagacaacaacaacaac----aaaaatacataaaaagaacttcatcaaagtgacaagctgttatgtatctgaagatatgatc s panPan2.chr12 80692512 128 - 135337776 ttcgtaacatagaatctggcaatactttcttggatatgacagtgaaggcacagacaacaaccaccac----aaaaatacgtaaaaagaacttcatcaaagtgaaaagcttttatgtatctgaagatacaatc i panPan2.chr12 I 47 C 0 s gorGor5.CYUI01015884v1 12989 128 + 508821 ttcataacatagaatctggcaataatttcttggatatgacagtgaaagcacagacaacaacaacaac----aaaaatacataaaaagaacttcatcaaagtgacaagctgttatgtatctgatgatatgatc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44659195 132 + 86207423 ttcataacatagaatctggcaataacttcttggatatgacagtgaaagcacagacaacaacaacaacaaaaaaaaaaacataaaaagaacttcatcaaagtgccaagcttgtatgtatctgaagttataatc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 48999 125 - 204787373 ttcataatgtagaatctggcaataatttcttggatatgacagtgaaagcacacacaacaacaaca-------aaaatacatgaaaagaatttcatcaaagtgaaaagcttttatgtatctgaagatgcaatc i rheMac8.chr2 C 0 C 0 s macFas5.chrUn_KE145888 55758 125 - 342590 ttcataatgtagaatctggcaataatttcttggatatgacagtgaaagcacacacaacaacaaca-------aaaatacatgaaaagaatttcatcaaagtgaaaagcttttatgtatctgaagatgcaatc i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 108366 127 - 5309094 ttcataacatagaatctggtaataatttctaggatatgacagtgaaagcacagacaacagcagcaac-aaacaacatacatgaaaagaactt----aaagtgaaaagcttttatgtatctgaagatacaatg i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 103572 127 - 1981259 ttcataacatagaatctggtaataatttcttggatatgacagtgaaagcacagacaacaacagcaac-aaacaacatacatgaaaagaactt----aaagtgaaaagcttttatgtatctgaagatacaatg i cerAty1.NW_012001209v1 C 0 C 0 s chlSab2.chr12 13866 125 + 108555830 ttcataatgtagaatctggcaataatttcttggatatgacagtgaaagcacagacaacaacaaca-------aaaatacataaaaagaacttcatcaaagtgaaaagcttttatgtatctgaagatacaatc i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012098222v1 115379 127 + 458990 ttcataacatagaatctggtaataatttcttggatatgacagtgaaagcacagacaacaacagcaac-aaacaacatacatgaaaagaactt----aaagtgaaaagcttttatgtatctgaagatacaatg i manLeu1.NW_012098222v1 C 0 C 0 s colAng1.NW_012114821v1 16525 125 + 20575453 ttcataatgtagaatctggcaacaatttcttggatatgacagtgaaagcacagacaacaacaaca-------aaaatacatgaaaagaacttcatcaaagtgaaaagcttttatgtatctgaagatgcaatc i colAng1.NW_012114821v1 C 0 C 0 e panTro5.chr10 18072 879 + 135926727 I a score=4981180.000000 s hg38.chr3_KI270784v1_alt 109181 985 + 184404 aatagattgaaaata-aattcatgaagggaaagaaaatattcacacattatatatttgataagtaattaatatctaggctatataaagacct---cagcaacaacaacaa---aacaatcaaatttaaacatgagcaaaggttttagaatacacatttctcttacgaagatatgcaaatgaccagtaaacacaggataaggtgctcagcatcactaatcgtgagaaaaaagtaaatccaaaccacagtgcaataccaactaacacatgtaagcatagctgccatcaaaagcaccaccaccagcaaagca----aaacaacaaagccccagagaacagcaaatgct-gatgtggagaagtcaggactcctgcacactgctggtgggaaagtaagatggcacagccactgtggaaaacagtaatcaccatatgatacagtaattccacatctgggtatataccccaaaaaactgaaagtgggaattcgcacatccctgtttatagcagcattcacaagagccagagggtag-aaaaagcccaaatgtccatctacagatgaatggataaacaaatatgatcaatacacacaatgatatattattcagccttaaaaagaaa-----ttctaatacatgctacaacataaaccttgaaaagattaaaac-aaaaaaatgcaaatactctatgctttccacttttatagcatacctagagcaattaaattcatagacacagaaagtaggatgtggtttccagggga-t-ggggggaagggaaa-ggggagctattgttccgtggatacagagtttcactttgggatgataagacagggttgg-aa-tggatagtggtgacagttgcacaacaatgtatttatacttaatgtact-t-----ttctgttatacgtattttaccacagt-aaaaaaaTTAGc---aaatatttaaaaatctacttgtttccttgaactgtttctttacatcccttgtccatttttcaatttggctgttggtctttt s panTro5.chr10 18951 986 + 135926727 aatagattaaaaata-aattcatgaagggaaagaaaatattcacacattatgtatgtgataagtaattaatatccaggctatataaagacct---cagcaacaacaacaa--------tcaaatttaaacatgagcaaaggttttaaaatacacatttctctaaagaagatatgcaaatgaccagtaagcacaggataaggtgctcagcatcactaatcttgagaaaaaagtaaatccaaaccacaatgcaataccaattgacacatgtaagcatagctgccatcaaaaaaacc-ccaccagcaaagca----aaacaacaaagccccagagaacagcaaatgctagatgtggagaagtcaggactcctgcacactgctggtgggaaagtaagatggcacagccactgtggaaaacagtaatcaccatatgatccagtaattccacatctgggtatatgccccaaaaaactgaaagtgggaatttgcacacccatgtttatagcaccattcacaagagccaaagggcag-aaaaagcccaaatctccatctacagatgaatggataagcaaatatgatcaatacacacaatgatatattagtcagccttaaaaagaaa----attctaatacatgctacaacataaaccttgaaaacattaaaac-aaaaaaatgcaaatactccatgctttccacttttctagtgtacctagagcagttaaattcatagacacagaaagtaggatgtggtttccagggga-t-ggggggaagggaga-ggggagctattgttccgtggatacagagtttcgctttgggatgataagacagctttgg-aa-tggatactggtgatagttgcacaacaatgtatttatacttaatgtact-taaattttctcttataaatattttacaacagt-aaaAAAGTTAGc---aaatatttaaaaatctacatgtttctttgaactgtttctttacatcccttgtccatttttcaatttggctgttggtctttt i panTro5.chr10 I 879 C 0 s panPan2.chr12 80692640 986 - 135337776 aatagattgaaaacacaattcatggagggggagaaaatatt--cacattatatatttgataagtaattaatatacaggctatataaagacct---cagcaacaacaacaa---aacactcaaatttaaacatgagcaaaggttttaaaatacacatttttttaaagaagatatacaaatgaccagtaagcacagtataaggtgctcagcatcact-atcatgagaaaaatgtaaatccaaaccacaatgcaataccaactgacacatgtaagtatagctaccatcaaaaaaaccaccaccagcaaaccaaaacaaacaacaagaccccagaaaacagcaaatgctggatgtggagaagtcaggactcttacacactgctggtgggaaagtaagatggcacagccactgtggaaaacagtaatcaccatatgatccagtaagtccacatctgggtatatacccaaaaaaactgaaagtgggaatttgcacacccatgtttatagcagcattcacaatagccaaagggtag-aagaagcccaaaagtccatctacagatgaatggataagcaaatatgatgtatacacacaatgatatattattcagccttaaaaacaaa-----ttctaatacatgctacaacataaaccttgaaaagatttaa---aaaaaaattcatatactctatgctttccacttttataacgtacctagagctgttaaattcatagacat--aaagtaggatgtgg-atccagggga-t-ggcaggaagggaaatggggagctattgttccgtggatacagagtttcactttgggatgatgaaacaggtttgg-aattggatagtggtgatagttgcacaacaatgtatttgtacttaatATACT-TAAATTTTCTGTTACACATATTTTACCACAGT-AAAAAAAATAGC---AAATATTTAAAAATCTATGTGTTTCTTTGAACTA----TTTATATCCCTTGTCCATTTTTCAATTTGGCTGCTCATCTTTT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 13117 994 + 508821 aatagattgaaaatacaattcacggaggggaagtaaatattcacacattatatatttgataagtaactaatatccaggctatataaagacct---cagcaacaacaacaacaaaacaatcaaatttaaacatgagcaaaggttttagaatacacatttctctaaagaagatatgcaaatgaccagcaagcacaggataaggtgctcagcatcactaatcgtgagaaaaatgtaaatccaaaccacaatgcaataccaactgacacatgtaagcatagctgccatcaaaaa-atcaccaccagcaaagca----aaacaacaaagccccagagaacagcaaatgct-gatgtggagaagtcaggactcctgcacactgctggtgggaaagtaagatggcacagccactgtggaaaacagtaatcaccatatgatccagtaatcccacatctgggtatataccccaaaaaactgaaagtgggaatttgcacacccatgtttatagcagcattcacaagagccaaagggtag-gaaaagcccaaatgtccatctacagatgaatggataaacacatatgatcaatacacacaatgatatattattcagccttaaaaagaaaagaaattctaatacatgctacaacataaaccttgaaaagattaaaac-aaaaaaatgcaaatactccatgctttccacttttatagtgtacctaaagcagttaaattcatagacacagaaagtaggatgtggtttccagggga-tgggggggaagggaaa-ggggagctattgttccgtggatacagagtttcactttgggatgataagacagggttgg-aa-tggatagtggtgacagttgcacaacaatgtatttatacttaatgtact-t-----ttctgttatacgtattttaccacagt-aaaaaaaTTAGc---aaatatttaaaaatctacatgtttctttgaactgtttgtttacatcccttgtccatttttcaatttggctgttggtctttt i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44659327 986 + 86207423 aatagattgaaaatacaattcatggagggaaa-aaaatattcac-cattatatatttgataagtaattaatatccaggccacataaagacct---cagcaacaacaa------aacaatccaatttaaacatgagcaaaggttttaaaatacacatttctttaaagaatatatacgtatgaccagtaagcacagtatagggtgctgagcatcactaatcatgagaaaaatgtaaatccaaaccacaatgcaataccaactgacgca--taagtatagctgccatcaagaaaaccgccaccagcaaacca----aagccacaaagccccagagaacagcaaatgctggacgtggagaagtcaggactcctgcacactgctggtgggaaagtaagatggaacagccactgtggaaaacagtaatcaccgcatgatccagcaattccacatctgggtatataccccaaaaaactgaaaatgggaatttgcacacccctgtttatagcagcattcacaagagccaaagggtag-aaaaggcccaaatgtccatcttcggatgaatggataaccaagtatgatgaatacacacaatggtatattattcagctttaaaaagaaa-----ttctaatacatgatacaacataaaccttgaaaagattaaaac-aaaaaaatgcaaatactccatgctttccacttttatggtgtacctagagcagttaaattcatagacacagaaagtaggatgtggtttccagggga-t-ggggggaagggaaa-gcggagctattgttccgtggatacagagtttcactttgggatgataagacaggtgtgg-aa-gggacagtggtgatagttacacaacaatgtatttatacttaacgTACT-TACATTTTCTGTTATACATATTTTACCACAGTAAAAAAAATTAGc---aaatatttaaaaatctgcatgtttctttgaactgtttctttacatcccttgtccatttttcaatttggctgttggtctttt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 49124 985 - 204787373 aataggttgaaaata-aattcatggagggaaagaaaatattcacacattatatatttgataag----taataaccaggctatataaagacct---cagcaacaacaacaa---aacaatccaatttaaacatgcgcaaagatttt-aaatacacatttctttaaagaagatagataaatgaccagtaagcacagtataaactgcacagcatcactaatcatgagaaaaatgtaaatccaaaccacaacgcaataccaactgacacatataagtgtagctgccatcaaaaaaaccaccaccagcaaacca----aaacaacaaagccccagaaaacagcaaatgctggatgtggagaagtcaggactcctgcacactgctggtgggaaagtaagatgccacagccactgtggaaaacagtaatcaccacatgatccagtaattccacatctgggtatatacgccaagaaaccgaaagtgggaatttgcacacccatgtttatagcagcattcacaagagccaaaggatag-aaaaagcccaaatgtccatgtacagatgaatggataagcaaatatgatcaatacacacaatgatatattattcagccttaaaaaggagaggcattctaata-atgctacaacataaaccttgaaaagattaacac-caaaaaatgcaaatactctatgctttccacttttatagcatacctagagcagttgaattcacagacacag--agtaggatgtggtttccagggga-t-gggggaaagggaaa-ggggagccattgctcggtgg--atagagtttcactttggggtgat--gacaggtttgg-aa-tggatagtggtgatagttgcacaacaatgtatttgtacttaatgTACT-TAAATTTTCTGTTTTACATATTTTACCACAGT-AAAAAA--AATTAGCAAACATTTTAAAATCTACATGtttctttgaactgtttctttacatcccttgtccatttttcaacttggttgttggtctttt i rheMac8.chr2 C 0 C 0 s macFas5.chrUn_KE145888 55883 985 - 342590 aataggttgaaaata-aattcatggagggaaagaaaatattcacacattatatatttgataag----taataaccaggctatataaagacct---cagcaacaacaacaa---aacaatccaatttaaacatgcgcaaagatttt-aaatacacatttctttaaagaagatagataaatgaccagtaagcacagtataaactgcacagcatcactaatcatgagaaaaatgtaaatccaaaccacaacgcaataccaactgacacatataagtgtagctgccatcaaaaaaaccaccaccagcaaacca----aaacaacaaagccccagaaaacagcaaatgctggatgtggagaagtcaggactcctgcacactgctggtgggaaagtaagatgccacagccactgtggaaaacagtaatcaccacatgatccagtaattccacatctgggtatatacgccaagaaaccgaaagtgggaatttgcacacccatgtttatagcagcattcacaagagccaaaggatag-aaaaagcccaaatgtccatgtacagatgaatggataagcaaatatgatcaatacacacaatgatatattattcagccttaaaaaggagaggcattctaata-atgctacaacataaaccttgaaaagattaacac-caaaaaatgcaaatactctatgctttccacttttatagcatacctagagcagttgaattcacagacacag--agtaggatgtggtttccagggga-t-gggggaaagggaaa-ggggagccattgctcggtgg--atagagtttcactttggggtgat--gacaggtttgg-aa-tggatagtggtgatagttgcacaacaatgtatttgtacttaatgtact-taaattttctgttttacatattttaccacagt-aaaaaa--aaTTAGCAAACATTTTAAAATCtacatgtttctttgaactgtttctttacatcccttgtccatttttcaacttggttgttggtctttt i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 108493 993 - 5309094 aatagattgaaaatacaattcacggagggggagaaaatactcacacgttatatatttgataagtaattaatatccaggctatataaagacct---gagcgacaaccacaa---aacactcaaatttaaacatgagcaaaggttttaaaatatacatttctttaaagaagatatacaaatgaccagtaaacacagtataaggtgtgcagcatcactaatcatgagaaaaatgtaaatccaaaccacaatgcaataccaactgacacatataagtacagctaccatcaaaaaacccaacaccaccaaatcaaagcaaacaacacagccccagaaaacagcaaatgctggatgtggagaagccaggactcctgcacaccgccggtggaaaagtaagatggcacagccactgtggacaacagtaatcacaataggatccagtaattccacatctgggtatataccccaaaaaactgaaagcgcgaatttgcacacccatgtttatagcagcattcacaagagccaaaggctag-aaaaagccaaaaggtccatctacagatgaattgataagcaaatat-atcaacatacacaatgatgtattattcagccttgaaaagaa-----attctaatacatgctacaacacaaaccttgaaaagattaa-aa-caaaaaatgcaaatattctatgctttccacttttataatgtacctagagcagttaaattcatagacacagaaagtaggatgtggtttccagggga-t-ggggg-aagggaaa-tgggagctattgttccgtggatatagagtttcactatgggatgataaaacagatttggaaa-tgaatagtggtgatagctgcacaacaatgtatttgtacttcatgTTCTAAAAAAATTCTGTTATACATATTTTACCAAAGT-AAAAAA--AAAT---TAATATTTAAAAATCTACATGtttctttgaactgtttctttacatcccttatccatttttcaatttggctgttggtctttt i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 103699 993 - 1981259 aatagattgaaaatacaattcacggagggggagaaaatactcacacgttatatatttgataagtaattaatatccaggctatataaagacct---gagcgacaacaacaa---aacactcaaatttaaacatgagcaaaggttttaaaataaacatttctttaaagaagatatacaaatgaccagtaaacacagtataaggtgcgcagcatcactaatcatgagaaaaatgtaaatccaaaccacaatgcaataccaactgacacatataagtacagctaccatcaaaaaacccaacaccaccaaatcaaagcaaacaacacagccccagaaaacagcaaatgctggatgtggagaagccaggactcctgcacaccgccggtggaaaagtaagatggcacagccactgtggacaacagtaatcacaatgggatccagtaattccacatccgggtatataccccaaaaaactgaaagcgcgaatttgcacacccatgtttatagtagcattcacaagagccaaaggctag-aaaaagcccaaaggtccatcaacagatgaatggataagcaaatatgatcaacatacacaatgatgtattattcagccttgaacagaaaagaaattctaatacatgctacaacacaaaccttgaaaagattaa-aa-caaaaaatgcaaatattctatgctttccacttttataatatacctagagcagttaaattcacagacacagaaagtaggatgtggtttccagggga-t-ggggg-aagggaaa-tgggagctattgttccgtggatatagagtttcactacgggatgataaaacagatttggaaa-tgaatagtggtgatagctgcacaacaatgtatttgtacttcatgTTCT-AAAAAATTCTGTTATACATATTTTATCAAAGT-GAAAA----------AAATATTTAAAAATCTACATGtttctttgaactgtttctttacatcccttatccatttttcaatttggctgttggtctttt i cerAty1.NW_012001209v1 C 0 I 15 s chlSab2.chr12 13991 995 + 108555830 aatagattgaaaata-aattcacagagggaaagaaaatattcacacattatatatttgataagtaattaatatccaggctatataaagacctcaaaaacaacaacaacaa---aacaatcaaatttaaacatgagcaaaggttttaaaatacacatttctttaaagaagat----aaatgaccagtaagcacagtataaactgtgcagcatcactaatcatgagaaaaatgtaaatccaaaccacaatgcaataccaactgacacatgtaagtgtagctgccatcaaaaaaaccaccgccagcaaaccg----aaacaacaaagccccagaaaacagcaaatgctggatgtggacaagtcaggactcctgcacactgctggtgggaaagtaagatgccacagccactgtggaaaacagtaatcaccacatgatccagtaattccacatctgggtatatacgccaagaaactgaaagagggaatttgcacacccatgtttatagcagcattcacaagagccagagggtagaaaaaagcccaaatgtccatctacagatgagcggatgagcaaatatgatcaatacacacaatgatatattattcagctttaaaaagaaaaggaattctaatacatgctacgacataaagcttgaaaagattaa-aaccaaaaaatgcaaatactctatgctttccacttttatagtgtacctagagcagttaaattcatagacacagaaagtaggatgtggtttccaggggact-ggggg-aagggaaa-ggggagctattgctctatggatgcagagtttcactttgggatgataacacaggtttgg-aa-tggatagtggtgatcattgcacaacaatgtatttgtacttaatgtact-taaattttctgttatacatactttaccacagt-aaaaaa-TTAGC---AAATATTTTAAAATCTACATGtttctttgaactgtttctttatatcccttgtccatttttcaatttggctgctggtctttt i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012098222v1 115506 998 + 458990 aatagattgaaaatacgattcatggagggggagaaaatactcacacgttatatattcgataagtaattaatatccaggctatataaacacct---gagcgacaacaacaa---aacactcaaatttaaacatgagcaaaggttttaaaatatacatttctttaaagaagatatacaaatgaccagtaaacacagtataaggtgcgcagcatcactaatcatgagaaaaatgtaaatccaaaccacaatgcaataccaactgacacatataagtacagctaccatcaaaaaacccaacaccaccaaatcaaagcaaacaacacagccccagaaaacagcaaatgctggatgtggagaagccaggactcctgcacaccgccggtggaaaaggaagatggcacagccactgtggacaacagtaatcacactaggatccagtaattccacatctgggtatataccccaaaaaactgaaagcgcgaatttgcacacccatgtttatagcagcattcacaagagccaaaggctag-aaaaagcccaaaggtccatctacagatgaatggataagcaaatatgatcaacatacacaatgatgtattattcagccttgaaaagaaatgaaattctaatacatgctacaacacaaaccttgaaaagattaa-aa-caaaaaatgcaaatattctatgctttccacttttataatgtacctagagcagttaaattcacagacacagaaagtaggatgtggtttccagggga-t-ggggg-aagggaaa-tgggagctattgttccgtggatatagagtttcactatgggatgataaaacagatttggaaa-tgaatagtggtgatagctgtacaacaatgtatttgtacttcatgTTCT-AAAAAATTCTGTTATACATATTTTACCAAAGT-AAAAAA--AAAT---TAatatttaaaaatctacatgtttctttgaactgtttctttacatcccttatccatttttcaatttggctgttggtctttt i manLeu1.NW_012098222v1 C 0 C 0 s colAng1.NW_012114821v1 16650 984 + 20575453 aataggttgaaaata-aattcacggagggaaagaaaatattcacacattatatatttgataag----taataaccaggctatataaagacct---cagcaacaacaacaa---aacaatcaaatttaaacacgagcaaaggttttaaaatacacatttctttaaagaagatatataaatgaccagtaagcacagtataaactgctcagcatcactaatcatgagaaaaatgtaaatccaaaccacaatgcaataccaactgacacatataagtgtagctgccatcaaaaaa-ccaccaccagcaaatca----aaacaacaaagccccagaaaacagcaaatgctggatgtggagaagtcaggactcctgcacactgctgg-gggaaagtaagatgccacagccactgtggaaaacagtaatcaccatatgatccagtaattccacatctgggtatatacaccaagaaaccaaaagtgggaatttgcacacccatgtttatagcagcattcacaagagccaaagggtag-aaaaagcccaaatgtccatgtacagatgaatggatgagcaaatatgatcaatacacacaatgatatattattcagccttaaaaaggaaaggcattctaatacatgctacaacataaaccttgaaaagattaacac-caaaaaatgcaaatactctatgctttccacttttatagcgtacctagagcagttaaattcatagacacagagaacaggatgtggtttccagggga-t-ggggggaagggaaa-ggggagctactgttccatggatacagagtttcactttggggtgat--gacaggtttgg-aa-tggatagtggtgatagttgcacaaca---tatttgtacttaatgtact-taaattttctgttatatatattttaccacagt-aaaaaa-TTAGc---aaatatttaaaaatctacatatttctttgaactgtttctttacatcccttgtccatttttcaatttggttgttggtctttt i colAng1.NW_012114821v1 C 0 C 0 a score=34174.000000 s hg38.chr3_KI270784v1_alt 110166 24 + 184404 aataatttagGATA--GCtatatagc s panTro5.chr10 19937 24 + 135926727 aataatttaggata--gctatacagc i panTro5.chr10 C 0 C 0 s panPan2.chr12 80693626 24 - 135337776 AATAATTTAGGata--tatatatata i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 14111 24 + 508821 aataatgtaggata--gctatatagc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44660313 24 + 86207423 aataatttagGATA--GCtatatagc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 50109 22 - 204787373 AATAATTTAAGata--tatatata-- i rheMac8.chr2 C 0 C 0 s macFas5.chrUn_KE145888 56868 22 - 342590 aataattTAAGata--tatatata-- i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 109486 14 - 5309094 Aat-atataggata--t--------- i macNem1.NW_012018355v1 C 0 C 0 s chlSab2.chr12 14986 24 + 108555830 aataatttaggatagctatatata-- i chlSab2.chr12 C 0 I 2 s manLeu1.NW_012098222v1 116504 20 + 458990 aAT-ATATAGGAT---tatatata-- i manLeu1.NW_012098222v1 C 0 I 2 s colAng1.NW_012114821v1 17634 11 + 20575453 aataatttagg--------------- i colAng1.NW_012114821v1 C 0 C 0 e cerAty1.NW_012001209v1 104692 15 - 1981259 I a score=1007363.000000 s hg38.chr3_KI270784v1_alt 110190 205 + 184404 tat---------------------------atatatacatatatatTACCCAAATTAGCTTTTTGTCTGTCATGTATGTTGCAGATCTATTTCCCCAGTCTGTTCACTTTTGACTTTGAGGCATTTTTCTCGCCTATAAAGTTTTAATTTGTATGGAGTCAAATGCATCAGTCTTCTATTCAAAGACTTATTTatgggtttggtgtttcagtttaggctgataaagaagttg s panTro5.chr10 19961 205 + 135926727 tat---------------------------atatatacatatatattacacaaattagctttttgtctgtcatgtatgttgcagatctgtttccccagtctgttgacttttgactttgatgcatttttcttgcctatgaagttttaatttttatagagtcaaatgcatcagtgttctATTCAAAGACTTATTTatgggtttggtgtttcagtttaggctgataaagaagttg i panTro5.chr10 C 0 C 0 s panPan2.chr12 80693650 229 - 135337776 tatataatatgtatttataatataaatgagatatatatatatataAAACCCAAATTAGCTTTTTGTCTGTCATGTATGTTGCAGATCTATTTCCCCAATCTGTTGACTTTTGACTTTGAGACATTTTTCTCTCATAGAAAGTTTTAATTTTTATGGAGTCAAATTCATTAGTCTTCTATTCAAAGACTTCTTTGtgggcatagtgtttcactttaggatgata---aagttg i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 14135 205 + 508821 tat---------------------------atatatacatatatattacccaaattagctttttgtctgtcatgtatgttgcagatctatttccccagtctgttgacttttgactttgaggcatttttgtcgcctataaagttttaatttgtatggagtcaaatgcatcagtcttctATTCAAAGACTTATTTatgggtttggtgtttcagtttaggctgataaagaagttg i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44660337 195 + 86207423 tac---------------------------atatatatatacatatTACCCAAATTAGCTTTTTGTCTGTCATGTATGTTGCAGATCTATTTCCCCAGTCTG-------TTGACTTTGAGGCATTTTTCTCGCCTATAAAGTGTTAATTTTTATGGAGTCGAATGCATCAGTCTTCTATTCAAAGacttctttatgggtttggtgtttcagtttaggatgtta---aagttg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 50131 205 - 204787373 tat---------------------------atacatatatatatatatCCCAAATTAGCTTTTTGTCTGTCATGTACGTTGCAGATCTATTTCCCCAGTCTGTTGACTTTTGACTTTGAGGCATTTTTCTTGCCTATAAATTTTTAATTTTTATGGAGTAAAATGCATCAGTCTTCTTGTCAAAGACTTATTTATGGGTATGGTGTTTCAGTTTAGGATGATAAAGAAGTTG i rheMac8.chr2 C 0 C 0 s macFas5.chrUn_KE145888 56890 205 - 342590 tat---------------------------acatatatatatatatatCCCAAATTAGCTTTTTGTCTGTCATGTACGTTGCAGATCTATTTCCCCAGTCTGTTGACTTTTGACTTTGAGGCATTTTTCTTGCCTATAAATTTTTAATTTTTATGGAGTAAAATGCATCAGTCTTCTTGTCAAAGACTTATTTATGGGTATGGTGTTTCAGTTTAGGATGATAAAGAAGTTG i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 109500 200 - 5309094 --------------------------------atatatatatatgtaACCCAAATCAGCATTTTGTCTGTCATGTATGTTGCAGATCTATTTCCCCAGTATGTTGACTTTTGACTTTGAGGCATTTTTCTCTCATAGAAAGTTTTAATTTTTATGGAATCAAATGCATCCGTCTTCTATTCAAAGACTTATTTatgggcatagtgtttcagtttaggatgataaagaagtgg i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 104707 205 - 1981259 tat---------------------------atatatatatatatgtaACCCAAATCAGCATTTTGTCTGTCATGTATGTTGCAGATCTATTTCCCCAGTATGTTGACTTTTGACTTTGAGGCATTTTTCTCTCATAGAAAGTTTTAATTTTTATGGAATCAAATGCATCCGTCTTCTATTCAAAGACTTATTTataggcatagtgtttcagtttaggacgataaagaagtgg i cerAty1.NW_012001209v1 I 15 C 0 s chlSab2.chr12 15012 223 + 108555830 tAT---------acacacacacacacacacacatatatatacacatcacccaAATTAGCTTTTTGTCTGTTACGTATGTTGCAGATCTATTTCCCCAGTCTGTTCACTTTTGACTTTGAGGCATTTTTCTCCCCTTTAAAGTTTTAATTTTTATGGAGTCAAATGCATCAGTCTTGTATTCAAAtacttatttatggggatggtgtttcagtttaggatgataaagaagttt i chlSab2.chr12 I 2 C 0 s manLeu1.NW_012098222v1 116526 205 + 458990 tat---------------------------atatatatatatatGTAACTCAAATCAGCATTTTGTCTGTCATGTATGTTGCAGATCTATTTCCCCAGTATGTTGACTTTTGACTTTGAGGCATTTTTCTCTCATAGAAAGTTTTAATTTTTATGGAATCAAATGCATCCGTCTTCTATTCAAAGACTTATTTatgggcatagtgtttcagtttaggatgataaagaagtgg i manLeu1.NW_012098222v1 I 2 C 0 s colAng1.NW_012114821v1 17645 204 + 20575453 ----------------------------agatatatatatatataaaacccaaattagctttttgtctgtcatgtatgttgcagatctatttccccagtctgttgacttttgactttgagacattttcctcgcctataaagttttaatttttatggagtcaaatgcatcagtcttCTAGTCAAAGACTTTTTTATGGGTATGGTGTTTCAGTTTAGGATGATAAAGAAGTTG i colAng1.NW_012114821v1 C 0 I 40 a score=56540.000000 s hg38.chr3_KI270784v1_alt 110395 11 + 184404 tagatatggat s panTro5.chr10 20166 11 + 135926727 tagatatggat i panTro5.chr10 C 0 C 0 s panPan2.chr12 80693879 11 - 135337776 tagatatggat i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 14340 11 + 508821 tagatatggat i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44660532 11 + 86207423 tagatatggat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 50336 11 - 204787373 TAGATATGGAT i rheMac8.chr2 C 0 C 0 s macFas5.chrUn_KE145888 57095 11 - 342590 TAGATATGGAT i macFas5.chrUn_KE145888 C 0 C 0 s macNem1.NW_012018355v1 109700 11 - 5309094 tagatatggat i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 104912 11 - 1981259 tagatatggat i cerAty1.NW_012001209v1 C 0 C 0 s chlSab2.chr12 15235 11 + 108555830 tagatatggat i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012098222v1 116731 11 + 458990 tagatatggat i manLeu1.NW_012098222v1 C 0 C 0 e colAng1.NW_012114821v1 17849 40 + 20575453 I a score=766867.000000 s hg38.chr3_KI270784v1_alt 110406 257 + 184404 aaaggagatggttgtacaacac----attatactggatgccactcaactgtacgtttaaacatggttaaaatggtaagttttatgttgtgtatattttaccaccaaaaaaGGGCCAGGCTTAGATGTTTATATGTTAGGGGTTTGGAGTACCTCTAACATTTATTCCCCTCCAGGGGAATAATTTATAAA-CACCCACACAAGAAAAGTAGATACTGACCTCACAAATCTCCTTACAAGTCCCACAGCAAGGGCTGTCTGGG s panTro5.chr10 20177 258 + 135926727 aaaggagatggttgtacaacac----attatactggatgccactcaactgtacgttcaaacatagttaaaatggtaagttttatgttgtatatattttaccaccaaaaaaGGGCCAGGCTTAGATGTTTATATGTTAGGGGTTTGGAGTACCTCTAACATTTATTCCCCTCCAGGTCTCTAATTTATAAAACTCCCACACAAGAAAAGTAGATACTGACTTCACAAATCTCCTTACAAGTCCCACAGCAAGGGCTGTCTGGG i panTro5.chr10 C 0 C 0 s panPan2.chr12 80693890 262 - 135337776 aaaggagatgattttacaaaactgtgaatatactggatgccactgaactgtacatttaaacacggttaaaatgttaagttttatgttatatatattttaccaccaaaaaaGGGCCAGGCTTAGATGTTTATAGGTTAGGGGTTTGGAGTACCTTTAAAATTTGTTCCCCTCCAGGGCTCTAATTTATAAAACACCCACACAAGAAAAATAGATACTGACTTCACAAATCTCCTTACAAGTCCCACAGCAGAGGCTGTCTGGG i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 14351 257 + 508821 aaaggagatggttgtacaacac----attatactggatgccactcaactgtacatttaaacatggttaacatggtaagttttatgttgtgtatattttaccaccaaaaaaGGGCCAGGCTTAGATGTTTATATGTTAGGGGTTTGGAGTACCTCTAACATTTATTCCCCTCCAGGGGAATAATTTATAAA-CACCCACACAAGAAAAGTAGATACTGACTTCACAAATCTCCTTACAAGTCCCACAGCAAGGGCTGTCTGGG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44660543 258 + 86207423 aaaggagatgcttgtacaacac----attatactggacgccactcaactgtacatttaaacatggttataatggtaagttttatgttgtatatattttaccaccaaaaaaGGGCCAGGCTTAGATGTTTATATGTTAGGGGTTTGGAGTAACTCTAACATTTATTCCCCTCCAGGGCTCTAATTTATAAAACACCCACACAAGAAAAGTAGATACTGACTTCACAAATCTCCTTACAAGTCCCACAGCAGGAGCTGTCTGGG i nomLeu3.chr21 C 0 C 0 s macNem1.NW_012018355v1 109711 262 - 5309094 aaaggagatggttgtacaacactgtgaatatactggatgccactgagctgttcgtttaaccatggttaaaatggtaagttttatgttatatgtattttaccaccaaaaaaGGGCCAGGCTTAGATGTTTATAGGTTAGGGGTTTGGAGTACCTGTAACATGTATTCCCCTCCAGGGCTCTAATTTATAAAACACCCACACAAGAAAAGTAGACACTGACTTCACAAATCTCCTTACAAGTCCCACAGCAGAGGCTGTCTGGG i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 104923 262 - 1981259 aaaggagatggttgtacaacactgtgaatatactggatgccactgagctgttcgtttaaccatggttaaaatggtaagttttatgttatatgtattttaccacCAAAAAAGGGCCAGGCTTAGATGTTTCTAGGTTAGGGGTTTGGAGTACCTGTAACATGTCTTCCCCTCCAGGGCTCTAATTTATAAAACACCCACACAAGAAAAGTAGACACTGACTTCACAAATCTCCTTACAAGTCCCACAGCAGAGGCTGTCTGGG i cerAty1.NW_012001209v1 C 0 C 0 s chlSab2.chr12 15246 258 + 108555830 aaaggagatggttgtacaacac----attatactggatgccactcaactgtatgtttaaacatggttaaaatggtaagttttatgttgtatatattttaccaccaaaaaaGGGCCAGGCTGAGATGTTTAGATGTTAGGGGTTTGGAGTACCTCTAACATTTATTCCCTTCCAGGGCTCTAATTTATAAAACACCCACACAAAGAAAGTAGATACTGACTTCACAAATCTCCTTACAAGTCCCACAGCAGAGGCTGTCTGGG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012098222v1 116742 262 + 458990 aaaggagatggttgtacaacactgtgaatatactggaggccactgagctgttcgtttaaccatggttaaaatggtaagttttatgttatatgtattttaccaccaaaaaaGGGCCAGGCTTAGATGTTTCTAGGTTAGGGGTTTGGAGTACCTGTAACATGTATTCCCCTCCAGGGCTCTAATTTATAAAACACCCACACAAGAAAAGTAGACACTGACTTCACAAATCTCCTTACAAGTCCCACAGCAGAGGCTGTCTGGG i manLeu1.NW_012098222v1 C 0 C 0 e colAng1.NW_012114821v1 17849 40 + 20575453 I e rheMac8.chr2 50347 0 - 204787373 C e macFas5.chrUn_KE145888 57106 0 - 342590 C a score=36520.000000 s hg38.chr3_KI270784v1_alt 110663 7 + 184404 AAAGCAG s panTro5.chr10 20435 7 + 135926727 AAAGCAG i panTro5.chr10 C 0 C 0 s panPan2.chr12 80694152 7 - 135337776 AAAGCAG i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 14608 7 + 508821 AAAGCAG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44660801 7 + 86207423 AAAGCAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 50347 7 - 204787373 AAAGCAG i rheMac8.chr2 C 0 C 0 s macFas5.chrUn_KE145888 57106 7 - 342590 AAAGCAG i macFas5.chrUn_KE145888 C 0 N 0 s macNem1.NW_012018355v1 109973 7 - 5309094 AAAGCAG i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 105185 7 - 1981259 AAAGCAG i cerAty1.NW_012001209v1 C 0 C 0 s chlSab2.chr12 15504 7 + 108555830 AAAGCAG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012098222v1 117004 7 + 458990 AAAGCAG i manLeu1.NW_012098222v1 C 0 C 0 e colAng1.NW_012114821v1 17849 40 + 20575453 I a score=67240.000000 s hg38.chr3_KI270784v1_alt 110670 14 + 184404 AGGTGGAAAAAGTC s panTro5.chr10 20442 14 + 135926727 AGGTGGAAAAAGTC i panTro5.chr10 C 0 C 0 s panPan2.chr12 80694159 14 - 135337776 AGGTGGAAAAAGTC i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 14615 14 + 508821 AGGTGGAAAAAGTC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44660808 14 + 86207423 AGGTGGAAAAAGTC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 50354 14 - 204787373 AGGTGGAAAAAGTC i rheMac8.chr2 C 0 I 511 s macFas5.chr6 2438 14 - 181584905 AGATGGAGGAAGGC i macFas5.chr6 N 0 C 0 s macNem1.NW_012018355v1 109980 14 - 5309094 AGGTGGAAAAAGTC i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 105192 14 - 1981259 AGGTGGAAAAAGTC i cerAty1.NW_012001209v1 C 0 C 0 s chlSab2.chr12 15511 14 + 108555830 AGGTGGAAAAAGTC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012098222v1 117011 14 + 458990 AGGTGGAAAAAGTC i manLeu1.NW_012098222v1 C 0 C 0 e colAng1.NW_012114821v1 17849 40 + 20575453 I a score=21272.000000 s hg38.chr3_KI270784v1_alt 110684 8 + 184404 ACT---------TAAAC s panTro5.chr10 20456 8 + 135926727 ACA---------TAAAC i panTro5.chr10 C 0 C 0 s panPan2.chr12 80694173 8 - 135337776 ACA---------TAAAC i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 14629 8 + 508821 ACA---------TAAAC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44660822 8 + 86207423 ACA---------TAAAC i nomLeu3.chr21 C 0 C 0 s macFas5.chr6 2452 17 - 181584905 ATGCATGCAGGCTGAGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 109994 8 - 5309094 ACA---------TAAAC i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 105206 8 - 1981259 ACA---------TAAAC i cerAty1.NW_012001209v1 C 0 C 0 s chlSab2.chr12 15525 8 + 108555830 ACA---------TAAAC i chlSab2.chr12 C 0 I 144 s manLeu1.NW_012098222v1 117025 8 + 458990 ACA---------TAAAC i manLeu1.NW_012098222v1 C 0 C 0 e colAng1.NW_012114821v1 17849 40 + 20575453 I e rheMac8.chr2 50368 511 - 204787373 I a score=258092.000000 s hg38.chr3_KI270784v1_alt 110692 48 + 184404 TTGAGGTCAACGTGAGACCTCCCATCCCCTACTCTGGAATCAGTTGGA s panTro5.chr10 20464 48 + 135926727 TTGAGGTCAGTGTGAGACCTCCCATCCCCCACTCTGGAATCAGATGGA i panTro5.chr10 C 0 N 0 s panPan2.chr12 80694181 48 - 135337776 TTGAGGTCAGTGTGAGACCTCCCATTGCCTACTCTGAAATCAGATGGA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 14637 48 + 508821 TTGAGGTCAATGTGAGACCTCCCATCCCCTACTCTGGAATCAGTTGGA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44660830 48 + 86207423 TTGAGGTCAGTGTGAGACCTGCCATCTCCCACCCTGGAATCAGATGGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 50879 48 - 204787373 TTGAGGTCAGTGTGAGACCTCCCATCCCCTGCTCTGGAATCAGATGGA i rheMac8.chr2 I 511 C 0 s macFas5.chr6 2469 48 - 181584905 TGGAGGTCAGTGTGAGACCTCCCGTCCCCTGCTCTGGAATCAGATGGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 110002 48 - 5309094 TTGAGGTCGATGTGAGACCTCCCGTCCCCTGCTCTGGAATCAGATGGA i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 105214 48 - 1981259 TTGAGGTCGATGTGAGACCTCCCGTCCCCTGCTCTGGAATCAGATGGA i cerAty1.NW_012001209v1 C 0 C 0 s chlSab2.chr12 15677 48 + 108555830 TTGAGGTCAGTGTGAGACCTCCCACCCCCTGCTCTGGAATCAGATGGA i chlSab2.chr12 I 144 C 0 s manLeu1.NW_012098222v1 117033 48 + 458990 TTGAGGTCGATGTGAGACCTCCCGTCCCCTGCTCTGGAATCAGATGGA i manLeu1.NW_012098222v1 C 0 C 0 s colAng1.NW_012114821v1 17889 47 + 20575453 TTGAGGTCAGTGTGAGACCTCCCA-CCCCTGTTCTGGAATCAGATGGA i colAng1.NW_012114821v1 I 40 C 0 a score=61064.000000 s hg38.chr3_KI270784v1_alt 110740 11 + 184404 GGAAGGCATAC s panTro5.chr3 1144 11 - 202621043 GGAAGGCAGGC i panTro5.chr3 N 0 C 0 s panPan2.chr12 80694229 11 - 135337776 GGAAGGCATGC i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 14685 11 + 508821 GGAAGGCGTGC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44660878 11 + 86207423 GGAAGGCATGC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 50927 11 - 204787373 GGAAGGCATGC i rheMac8.chr2 C 0 I 216 s macFas5.chr6 2517 11 - 181584905 GGAAGGCATGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 110050 11 - 5309094 GGAAGGCACGC i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 105262 11 - 1981259 GGAAGGCACGC i cerAty1.NW_012001209v1 C 0 C 0 s chlSab2.chr12 15725 11 + 108555830 GGAAGGCATGC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012098222v1 117081 11 + 458990 GGAAGGCACGC i manLeu1.NW_012098222v1 C 0 C 0 s colAng1.NW_012114821v1 17936 11 + 20575453 GGAAGGCATAC i colAng1.NW_012114821v1 C 0 C 0 a score=2569196.000000 s hg38.chr3_KI270784v1_alt 110751 505 + 184404 ATGCAGGCTGAGCTGGAGAGATGAGCTGGGGTGGGCAGAACTGTCCTCCCATGAGCCCAGACCTTAACTGCTCCCACATGCTCCCAGGCATGTATCAAACCAAGAAAGC-GGCTAGGAGGGTAACACAGCTACCTGTATACAGGGAGCCATGAAATATCTGAGCTGCGCAAGTGATGCACAAGGAGACGGAAGCAGTATGACCTTTTACACAGTGACCTGGCTCGAATAATTTCAGGCTCTCATTCATCAGGCGAGCTCTGCTTTCTCTCTGAGGTAGGTAAACTTGAGGGGGTAAAGTGGGAGTTGGGGATAATGGAAAAGAAAGCCTGGTAGTATTTCTCCTAACTCTGTTATAAATAAAAAGTAAAACATAAATGCCTTTTCTCAGGGCCCAAATGTTAGGCG-AAAAAATGTTTGTCGTCTCAGTCATGTGATGTGGACTTCAGCAGAGCAGGACACACATGGTCATTTATC-CTTTCCCTCTGCATGTTGTGTGCTTTTTCAG s panTro5.chr3 1155 500 - 202621043 ATGCAGGCTGAGCTGGAGAGATGAGCTGGGGTGGGCAGAACTGTCCTCCCATGAGCCTAGACCTTAAGTGCTCCCACATGCTCCCAGGCATGTATCAAACCAAAAAAGCAGGCTAGGAGGGCAACACATCTACCTGTATACAGGGAGCTATGAAATATCTGAGCTGCGCAAGTGATGCACAAGGAGACGGAAGCAGTATGACCTTT-ACACAGTGACCTGGCTCAAATAATTTCAGGCTGTCATTAACCAGGCGAGCTCCGCTTTCTCTCTGAGGTAGGTAAACTTGAGGGGGTAAAGTGGGAGTTGGGGAAAATGGAAAAGAAAGCCTGGCAGTATTTCTTCTAACTCTGTTATAAATAAAAAGTAAAACATAGATGCTGTTTCTCAGGGCCCAAATGTTAGGTG-AAAAAATGT----CATCTCAGTCATGTGATGTGGACTTCAGCAGAGCAGGACACCCATGGTCATTTATC--TTTCCCTCTGCGTGTCGTGTGCTTTTTCAG i panTro5.chr3 C 0 C 0 s panPan2.chr12 80694240 495 - 135337776 ATGCTGGCTGAGCTGGAGAGATGAGCTGGGGTGGGCAGAACAGTGCTCCCATGAGCCTAGACCTTAAGTGCTCTCACATGCTCTCAGGCATGTATCAAATCAAGAAAGC-AGCTAGGAGGGCAACACATCTACCTGTATACAGGGAGCTATGAAATATCTGAGCTGAGTAAGTGATGCACAAGGAGACAGAAGCAGTGTGACCTTT-ACACAGTGACCTGACTCAAATAATTTCAGGTTCTCATTAACCAGGAGAGCTCCTCTTTCTCTCTGAGGTAGGTAAACTTGAGGGGGTAAAGTGGGAGTTGGGGATAATGGAAAAGAAATCCTGGTAGTATTTCCTCTAACTCTGTTATAAATA------AAAACATAAATGCCCTTTCTCAGGGCCCAAATGTTAGGTG-AAAAAATGT----CATCTCAGTCATGTGATGTGGACTTTAGCAGAGCAGTACACACATGGTCATTTATTCCTTTCCCTCTGCATGTTGTGTGTTTTTTCAG i panPan2.chr12 C 0 I 1 s gorGor5.CYUI01015884v1 14696 501 + 508821 ATGCAGGCTGAGCTGGAGAGATGAGCT-GGGTCAGCAGAACAGTCTTCCCATGAGCCTAGA-CTTAAGTGCTCTCACATGCTCCCAGGCATATATCAAACCAAGAAAGC-AGCTAGGAGGGTAACACATCTACCTGTATACAGGGAGCTATGAAATATCTGAGCTGCGCAAGTGATGCACAAGGAGACAGAAGCAGTCTGACCTTT-ACACAGTGACCTGGTTCAAATAATTTCAGGCTGTCATTAACCAGGCGAGCTCCGCTCTCTCTCTGAGGTAGGTAAACTTGAGGGGGTAAAGTGGGAGTTGGGGATAATGGAAAAGAAAGCCTGGTAGTATTTCTCCTAACTCTGTTATAAATAAAAAGTAAAACATAAATGCCTTTTCTCAGGGCCCAAATGTTAGGCG-AAAAAATGTTTGTCATCTCAGTCATGTGATGTGGACTTCAGCAGAGCAGGACACACATGGTCATTTATC--CTTTCCTCTGCATGTTGTGTGCTTTTTCAG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44660889 486 + 86207423 -TGCAGGCTGAGCTGGAGGGATGAGCT-GGGCTGGCAGAACAGTCCTCCCATGACCCTAGACCTGAAGTGCTCCCACATGCTCTCAGGCATGTATCAAACCAAGAAAGC-AGCTAGGAGGGTAACACAGCTACCTGTGTACAGGGAGCTATGAAATATCTGAGCTGCGCAAGTGATGCACAAGGAGACAGAAGCAGTCTGACCTTT-ACACAGTGACCTGGCTCAAATTATTTCAGGCTCTCATTAACCAGGTGAGCTCCGCTTTCTCTCTGAGGTAGGTAAACTTGAGGGGGTAAAGTGGG----------AATGGAAAAGAAAGCCTGGTAGTATTTCTTCTAACTCTGT------TAAAAAGTAAAACATAGATACCATTTCTCAGGGCCCAGATGTTAGGTG-AAAAAATGTTTTTCATCTCAGTCATGTGATGTGGATTTTAGCAGAGCAGGACACACATGGTCATTTATC-CTTTCCCTCTGCATGTTGTGTGCTTTTTCAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 51154 502 - 204787373 ATGCAGGCTGAGCTGGAGAGATGAGCTGGG--TGGCAGAACAGTCCTCCCATGACCCTAGATCTTAAGTGCTCCCACATGCTCTTAGGCATGTATCAAACCAAGAAAGCAGGCTAGGAGGGTAACACAGCTACCTGTGTACAGGGAGCTACGAAATACTTGAGCTGAGCAAGTGACGCACAAGGAGACAGAAGCAGTATGACCTTT-ACACAGTGACCTGGCTGAAATCATTTCAGGCTCTCATTAACCAGGCGAGCTCCGCTTTCTCTCTGAGGTAGGTAAACTTGA-GGGGTAAAGTGGGAGTTGGGGAAAACAGAAAAGAAACCCTGGTAGTATTTCTTTTAACTCTGTTTTAAATAACAAGTAAAACATAAATGCCCTTTCTCAGGGCCCAAATGCTATGTG-AAAACATGTTTGTCATCTCAGTCATGTGACATGGACTTTAGCAGAGCAGTACACACATGGTCATTATTC-CTTTCCCTCTGCACGTTGTGTGCTTTCTCAG i rheMac8.chr2 I 216 I 1 s macFas5.chr6 2528 503 - 181584905 ATGCAGGCTGAGCTGGAGAGATGAGCTGGG--TGGCAGAACAGTCCTCCCATGACCCTAGACCTTAAGTGCTCCCACATGCTCTCAGGCATGTATCAAACCAAGAAAGCAGGCTAGGAGGGTAACACAGCTACCTGTGTACAGGGAGCTACGAAATACTTGAGCTGAGCAAATGACACACAAGGAGACAGAAGCAGTATGACTTTT-ACACAGTGACCTGGCTCAAATCATTTCAGGCTCTCATTAACCAGGCAAGCTCCACTTTCTCTCTGAGGTAGGTAAACTTGAGGGGGTAAAGTGGGAGTTGGGGAAAACAGAAAAGAAAGCCTGGTAGTATTTATTCTAACTCTGTTATAAATCAAAAGTAAAACATAAATGCCCTGTCTCAGGGCCCAAATGTTATGTG-AAAAAATGTTTGTCATCTCAGTCACGTGACATGGACTTTAGCAGAGCAGTACACACATGGTCATTATTC-CTTTCACTCTGCATGTTGTGTGCTTTCTCAG i macFas5.chr6 C 0 I 1 s macNem1.NW_012018355v1 110061 502 - 5309094 ATGCAGGCCGGGCTGGAGAGATGAGCTGAGGTGGGCAGAACAGTCCTCCCACGAGCCTAGACCTTAAGTGCTCTCACGTGCTCTCAGGAATGTATCGAACCAAGAAAGCAGGCTAGGAGGGTAACACATCTACCTGTATACAGGCAGCTATGAAATGTCTGAGCTGAGCAAGTGATGCACAAGGAGACAGAAGCAGTATGACCTTT-ACACAGTGACCTGGCTCAAATCATTTCAGGCTCTCATTAACCAGGTGAGCCCCTCTTTCTCTCTGAGGTAGGTAAACTTGAGGGGGTAAAGTGGGATTTGGGGATAATGGAAAAGAAAGCCTGATAGCATTTCTTCTAACTC--TTATAAATAAAAATTAAAACATAAATGCCCTTCCTCAGGGCCCACATGTTAGGTGAAAAAAATGTTTGTCATCTCAGTCATGTGACGTGCACTTTAGCAGAGCAGTACACACATGGTCATTTATC-CTTTCCCTCTGCATGTTTTATGCGTTTT--G i macNem1.NW_012018355v1 C 0 I 1 s cerAty1.NW_012001209v1 105273 504 - 1981259 ATGCAGGCCGAGCTGGAGAGATGAGCTGAGGTGGGCAGAACAGTCCTCCCAGGAGCCTAGACCTTAAGTGCTCTCACATGCTCTCAGGAATGTATCGAACCAAGAAAGCAGGCTAGGAGGGTAACACATCTACCTGTATACAGGCAGCTATGAAATGTCTGAGCTGAGCAAGTGATGCACCAGGAGACAGAATCAGTATGACCTTT-ACACAGTGACCTGGCTCAAATCATTTCAGGCTCTCATTAACCAGGTGAGCTCCTCTTTCTCTCTGAGGTAGGTAAACTTGAGGGGGTAAAGTGGGATTTGGGGATAATGGAAAAGAAAGCCTGATAGCATTTCTTCTAACTC--TTATAAATAAAAATTAAAACATAAATGGCCTTCCTCAGGGCCCAAATGTTAGGTGAAAAAAATGTTTGTCATCTCAGTCATGTGACATGCACTTTAGCAGAGCAGTACACACATGGTCATTTATC-CTTTCCCTCTGCATGTTTTATGCGTTTTCAG i cerAty1.NW_012001209v1 C 0 I 1 s chlSab2.chr12 15736 496 + 108555830 ATGCAGGCTGAGCTGGAGAGATGAGCTGGGGTGGGCAGAACAGTCCTCCCATGACCCTAGACCTTAAGTGCTCCCACATGCTCTCAGGCATGTATCAAACCAAGAAAGCAGGCTAGGAGGGTAACACAGCTACCTGTGT-------GCTATGAAATATCTGAGCTGAGCAAATGACACACAAGGAGACAGAAGCCGTATGACCTTT-ACACAGTGACCTGGCTCAAATCA-TTCAGGCTCTCATTAACCAGGCGAGCTCCGCTTTCTCTCTGAGGTAGGTAAACTTGA-GGGGTAAAGTGGGAGTTGGGGAAAATAGAAAAGAAAGCCTGGCAGTATTTCTTCTAACTCTGTTATAAATAAAAAGTAAAACATAAATGCCCTTTCTCAGGGCCCAAATGTTAGGTG-AAAAAGTGTTTGTCATCTCAGTCATGTGACATGGACTGTAGCAGAGCAGTACACACATGGTCATTATTC-CTTTCCCTCTGCATGTTGTGTGCTTTCTCAG i chlSab2.chr12 C 0 I 300 s manLeu1.NW_012098222v1 117092 504 + 458990 ATGCAGGCCGAGCTGGAGAGATGAGCTGAGGTGGGCAGAACAGTCCTCCCACGAGCCTAGACCTTAAGTGCTCTCACATGCTCTCAGGAATGTATCGAACCAAGAAAGCAGGCTAGGAGGGTAACACATCTACCTGTATACAGGCAGCTATGAAATGTCTGAGCTGAGCAAGTGATGCACGAGGAGACAGAAGCAGTATGACCTTT-ACACAGTGACCTGGCTCAAATCATTTCAGGCTCTCATTAACCAGGTGAGCCCCTCTTTCTCTCTGAGGTAGGTAAACTTGAGGGGGTAAAGTGGGATTTGGGGATAATGGAAAAGAAAGCCTGATAGCATTTCTTCTAACTC--TTATCAATAAAAATTAAAACATAAATGCCCCTCCTGAGGGCCCACATGTTAGGTGAAAAAAATGTTTGTCATCTCAGTCATGTGACGTGCACTTTAGCAGAGCAGTACACACGTGGTCATTTATC-CTTTCCCTCTGCATGTTTTATGCGTTTTCAG i manLeu1.NW_012098222v1 C 0 I 1 s colAng1.NW_012114821v1 17947 501 + 20575453 ATGCAGGCTGAGCTGGAGAGATGAGCAGGG--TGGCAGAACAGTCCTCCCATGACCCTAGACCTTAAGTGCTCCCACATGCTCTCAGGCATGTATCAAACCAAGAAAGCAGGCTAGGAGGGTAACACAGC-AAGTGTATACAGGGAGCTATGAAATACTTGAGCTGAGCAAATGACACACAAGCAGACAGAAGCAGTATGACCTTT-ACACAGTGACCTGGCTGAAATCATTTCAGGCTCTCATTAACCAGGAGAGCTCCGCTTTCTCTCTGAGGTAGGTGAACTTGA-GGGGTAAAGTGGGAGTTGGGGAAAACAGAAAAGAAAGCCTGGTAGTATTTCTTCTAACTCTGTTATAAATAAAAAGTAAAACATAAATGCCCTGTCTCAGGGCCCAAATGCTATGTG-AAAAAATGTTTGTCATCTCAGTCACGTGACATGGACTTTAGCAGAGCAGTACACACGTGGTCATTATTC-CTTTCCCTCTGCATGTTGTGTGCTTTCTCAG i colAng1.NW_012114821v1 C 0 I 1 a score=68475.000000 s hg38.chr3_KI270784v1_alt 111256 12 + 184404 TTTATAATGTAC s panTro5.chr3 1655 12 - 202621043 TTTATAATGTAC i panTro5.chr3 C 0 C 0 s panPan2.chr12 80694736 12 - 135337776 TTTATAATGTAC i panPan2.chr12 I 1 C 0 s gorGor5.CYUI01015884v1 15197 12 + 508821 TTTATAATGTAC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44661375 12 + 86207423 TTTATAATGTAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 51657 12 - 204787373 TTTATAACGTAC i rheMac8.chr2 I 1 C 0 s macFas5.chr6 3032 12 - 181584905 TTTATAACGTAC i macFas5.chr6 I 1 C 0 s macNem1.NW_012018355v1 110564 12 - 5309094 TTTATAATGTAC i macNem1.NW_012018355v1 I 1 C 0 s cerAty1.NW_012001209v1 105778 12 - 1981259 TTTATAATGTAC i cerAty1.NW_012001209v1 I 1 C 0 s chlSab2.chr12 16532 12 + 108555830 TTTATAATGTAC i chlSab2.chr12 I 300 C 0 s manLeu1.NW_012098222v1 117597 12 + 458990 TTTTTAATGTAC i manLeu1.NW_012098222v1 I 1 C 0 s colAng1.NW_012114821v1 18449 12 + 20575453 TTTATAATGTAC i colAng1.NW_012114821v1 I 1 C 0 a score=31421.000000 s hg38.chr3_KI270784v1_alt 111268 6 + 184404 CTGATC s panTro5.chr3 1667 6 - 202621043 CTGATC i panTro5.chr3 C 0 C 0 s panPan2.chr12 80694748 6 - 135337776 CTGATC i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 15209 6 + 508821 CTGATC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44661387 3 + 86207423 CTG--- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 51669 6 - 204787373 CTGATC i rheMac8.chr2 C 0 C 0 s macFas5.chr6 3044 6 - 181584905 CTGATC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 110576 6 - 5309094 CTGATC i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 105790 6 - 1981259 CTGATC i cerAty1.NW_012001209v1 C 0 C 0 s chlSab2.chr12 16544 6 + 108555830 CTGATC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012098222v1 117609 6 + 458990 CTGATC i manLeu1.NW_012098222v1 C 0 C 0 s colAng1.NW_012114821v1 18461 6 + 20575453 CTGATC i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 21618 6 - 117903854 CTTATT i calJac3.chr13 N 0 C 0 a score=4821595.000000 s hg38.chr3_KI270784v1_alt 111274 727 + 184404 CACTTGTCTCATCACACTAGCTGCAAACAAGGCCAC-TGAATGTCACACCAGGTGGCCAGCATGTCTGTGAAGGGCAGAAACTGGGGCAGCCAAACAGCTGGCAGAGGCCAGCTAGGAAGTACCCGATGCCC------------ACTCCATAGAGGACTCCACACTTAAAAGACAAGATCAGCAAGTGTCAGGCTGCCTCACTAGTTATCCCCCC----AAATAAAA----AAATAAAAGTAACCCCTCCAGGGAAC--GTGTGTG-TACACACAAAAGTACATGCACACATCTACATGCAAACGGGAAAGGCTGGGAAGGAACCAAATCCACCTCTGAACACCAGTTACTTGTGGGGAAGGGGCAGGTGAAGCCAACTGTCAGCATTACTCACCTTTTCAACTGATAAGCTTGCATCAATTTTGGCAATTTCTCAT-----AAAAAGGCAATTTTCACTCCTTGGGTGATCACCCAGGTCCTGCAAAACTGAGCCACCAACAACCACCTGCACCACTTCCCATGAGGCCAAATAATGGCTTCCCTCAAAGCTCAGCCCTCCCACCCGCCTCCCAGTCCT-CTCCCATGCAGGGGGCTGCCGGCCTCCTGGGGTACAGGTGTCCAGGCCAAACCCAACCCACAGATGGTTGGTGAAACCAGCATGTATCCAAGAGCCTTTCCACCACCTG-GGCCATGTGCCCACTGCATAGATAGGCCTGTGCTTGCTCCCCTAGGACA-GAGACTCCCTTTTCTT-CC s panTro5.chr3 1673 726 - 202621043 CACTTGTCTCATCATACTAGCTGCAAACAAGGCCAC-TGAATGTCACACCAGGTGGCCAGCATGTCTGTGAAGGGCAGAAAGTGGGGCAGCCAAACAGCTGGCAGAGGCCAGCTAGTAAGTACCCGATGCCC------------ACTCCATAGAGGACTCCACAATTAAAAGACAAGATCAGCAAGTGTCAGGCTGCCTCACTAGTTATCCCCCC----AAATAAAT----AAATAAAAGTAACCCCTCCAGGGAAC--GTGTGTG-TACACACAAAAGTACATGCACACAGCTACATGCAAAGGGAAAAGGCTGGGAAGGAACCAAATCCACCTCTGAACACCAGTTACTTGTGGGGAAGGGGCAGGTGAAGCCAACTGTCAGCATTACTCACCTTTTCAACT-ATGAGATTGCATCAATTTTAGCAATTTCTCAT-----AAAAAGGCAATTTTCACTCCTTGGCTGATGACCCAGGTCCTGCAAAACTGAGCCACCAACAACCACCTGCACCACTTCCCATGAGGCCAAATAACGGCTTCGCTCAAAGCTCAGCCCTCCCACCCACCTCCCAGTCCT-CTCCCATGCAGGGGGCTGCCGGCCTCCTGGGGTACAGGTGTCCAGGCCAAACCCAACCCACAGATGGTTGGTGAAACCAGCACATATCCAAGGGCCTTTTCCCCACCTG-GGCCATGTGCCCACTGCATAGATAGGCCTGTGCTTGCTCCCCAAAGACA-GAGACTCTCTTTTCTT-CC i panTro5.chr3 C 0 C 0 s panPan2.chr12 80694754 734 - 135337776 CACTTGTCTCATCATACTAGCTGAAAACCAGGCCAC-TGAATGTCACACCAGGTGGCCAGCATGTCTGTGAAGGGCAGAAACTGGGGCAGCCAAACAGCTGGCAGAGGCCAGCTAGTAAGTACCCAATGCCC------------ACTCCACAGAGGACTCCACACTTAAAAGACAAGATAAGCAAGTGTCAGGCTGCCTCACTAGTTATCCCTCC----AAATAAAA----AAA-AGAAGTAACCCCTCCAGGGAACATGTGTGTG-TACACACCAAAGTACATGCACACAGCTTCATGCAAAGGGGAAAGGCTGGAAAGAAACCAAACCCACCTCTGAACACCAGTTACTTGTGGTGAAGGGGCAGATGAAACCGACTGTCAGCATTACTCACCTTTTCAACTGATGAGCTATCATCAATTTTGGCAATTTCTCATTAAAAAAAGAGGCAATTTTCATGCCGTGGGTGATCACCCAGGTCCTGCAAAACTGAGCTACCAACAACCACCTGCACCACTTCCCATGAGGCCAAATAATGGCTTCCCTCAAAGCTCAGCCCTCCCACCCACCTCCCAGTCCT-GTCCCATGCAGGGGGGTACTAGCCTCCTGGGGTAAAGGGATCCAGGCCAAATCTACCACAGAGATTGTTGGTGAAACCAGCATGTACCCAGGGGCCTTTCCCCAACCTG-GGCCATGTGCCCACTGCATCGATATACCTGTGCTTGCTCCCCTAGGACA-GAGACTCCCTTTTCTTACA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 15215 719 + 508821 CACTTGTCTCATCACACTAGCTGCAAACAAGGCCAC-TGAATGTCACACCAGGTGGCCAGCATGTCTGTGAAGGGCAGAAAGTGGGGCAGCCAAACAGCTGGCAGAGGCCAGCTAGGAAGTACCTGATGCCC------------ACTCCATAGAGGACTCCACACTTAGAAGACAAGATCAGCAAGTGTCAGGCTGCCTCACTAGTTATCCCCCC-------CAAAA----AAATAAAAGTAACCCCTCCAGGGAAT--GTGTGTG-TACACACAAAAGTACATGCACACAGCTACATGCAAA-GGGAAAGGCTTGGAAGGAACCAAATCCACCTCTGAACACCAGTTACTTGTGGGGAAGGGGCAGGTGAAGCCAACTGTCAGCATTACTCACCTTTTCAACTGATAAGCTTGCATCAATTTTGGCAGTTTCTCAT-----AAAAAGGCAATTTTCACTCCTTGGGTGATCACCCAGGTCCTGCAAAACTGAGCCACCAACAACCACCTGCACCACTTCCCATGAGGCCAAATAATGGCTTCCCTCAAAGCTCAGCCCTCCCACCCACCTCCCAGTCCT-CTCCCATGCA-GGGGCTGCCGGCC-CCTGGGGTACAGGTGTCCAGGCCAAACCCAACGCACAGATGGTTGGTGAAACCAGCATGTATCCAAGAGCCTTTCC-CCACCTG-GGCCATGTGCCCACTGCATA-ATAGGCCTGTGCTTGCTCCCCTAGGACA-GAGACTCCCTTTTCTT-CC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44661390 714 + 86207423 ----------ATCACACTAGCTGCAAACAAGGCCAC-TGAATGTCACAACAGGTGGCCAGCATGTCTGTGAAGGGCAGAAACTGGGGCAGCCAAGCAGCTGGCAGAGGCCAGCTAGTAAGTACCCAAC-CCC------------ACTCCATAGAGGACTCCACATTTAAAAGATAAGA--AACAAGTGTCAGGCTGCCTCACTAGTTATCCCCCC----AAATAAAA----AAATAAAAGTAACCCCTCCAGGGAACATGTGTATGTTACACACAAAAGTACATG--CACAGCTACATGCAAAGGGGAAAGTCTGGGAAGGAACCAAATCCACCTCTGAACACCAGTTACTTGTGGGGAAGGGGCAGTTGAAGCCAACTGTCAGCATTACTCACCTTTTCGACAGATGAGTTTGCATCAATTTTGGCAA-TTCTCAT-----AAAAAGGCCATTTTCACTCCTTGGGTGATCACCCAGGTCCTGCAAAACTGAGCCACCAACAACTACCTGCACCACTTCCCATGAGGCCAAATAATGGCTTCCCTCAAAGCTCAGACCTCCCAACGACCTCCCAGTCCT-CTCCCACGCAGGGGGCTACTGGCCTCCTGGGGTGCAGGGGTCCAGGCCAAACACAACCCACAGATGGTTGGTGAAACCAGCCCATATCCAAGGGCCTTTCCCCCACCTG-GGCCGTGTGCCCACTGCATAGATATGCCTGTGCTTGCTCCCCTAGGACA-CAGACTCCCTTTTATT-CC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 51675 729 - 204787373 CACTTGTCTCATCACACTAGCTGCAAACAAGGCCAC-TGAATGTCACACCAGGTGGCCAGCATGCCTGTGAAGGGCAGAAACTGGGGCAGACAAACAGCTGGCAGAGGCCAGCTAGAAAGTCCCCGATGCCC------------ACTCCATGGAGGACTCCACACTTAAAAGACAAGATAAGCAAGTGTCTGGCTGCCTCACTAGCTATCCCCCC----AAATAAAAAA--AAATAAAAGTAACCCCTCCAGGGAAC--GTGTGTG-TACACATAAAAGTACGTGCGCACAGCTACATGCAAAGGGGAAAGGCTGGGAAGGAAACAAATCCACCTCTGAACACCAGTTACTTGTGGGGAAGGGGCAGGTGAAGCCGCCTGTCCACATCACTCACCTTTTCAACTGATGAGCTCGCATCAGTTTTGGCAATTTCTCAT-----AAAAAGGCAATTTTCACTCCTTGGGTGATCACCCAGATCTGGCAAAACTGAGCCACCAACAACCACCTGCACCACTTGCCATGACGTCAAATAATGGCTTCCCTCAAAGCTGGGCCATCCCACCCACCTCCCAGTCCT-GTCCCATGCAGGGGGCTACCGGCCTCCTGGGGTACAGGGGTCCAGACCAAACCCAACCCACAGACAGCTGGTGAAACCAGCATGTATCCAAGGGCCTTCCCCCAACCTG-GGCCATGTGCCCACTGCACAGATAGTCCTGTGCTCGCTCCCCTAGGACA-GAGACTCCCTTTTCTT-CA i rheMac8.chr2 C 0 C 0 s macFas5.chr6 3050 727 - 181584905 CACTTGTCTCATCACACTAGCTGCAAACAAGGCCAC-TGAATGTCACACCAGGTGGCCAGCATGTCTGTGAAGGGCGGAAACTGGGGCAGCCAAACAGCTGGCAGAGGCCCGCTAGAAAGTCTCCGATGCCC------------ACTCCATGGAGGACTCCACACTTAAAAGACAAGGTAAGCACGTGTCCGGCTGCCTCACTAGCTATCCCCCC----AAATAAAA----AAATAAAAGTAACCCCTCCAGGGAAC--GTGTGTG-TACACACAAAAGTACGTGCACACAGCTACATGCAAAGGGGAAAGGCTGGGAAGGAACCAAATTCACCTCTGAACACCAGTTACTTGTGGCGAAGGGGCAGGTGAAGCCGCCTGTCCACATTACTCACCTTTTCAACTGATGAGCTTGCATCGGTTTTGGCAATTTCTCAT-----AAAAAGGCAATTTTCACTCCTTGGGTGATCACCCAGGTCCTGCAAAACTGAGCCACCAACAACCACCTGCACCACTTCCCATGAGGCCAAATAATGGCTTCCCTCAAAGCTCAGCCCTCCCACCCACCTCCCAGTCCT-GTCCCATGCAGGGGGCTACCGGCCTCCTGGGGTACAGGGGTCCAGGCCAAACCCAACCCATAGACGGTTGGTGAAACCAGCATGTATCCAAGGGCCTTTCCCCAACCTA-GGCCACGTGCCCACTGCATAGATAGGCCTGTGCTTGCTCCCCTAGGACA-CAGACTCCCTTTTCTT-CA i macFas5.chr6 C 0 I 165 s macNem1.NW_012018355v1 110582 726 - 5309094 CACTTGTCTCATCATGCTAGTTGCAAACAAGGCCAC-TGAATGTCACAGCAGGTGGCCAGCGTGTCTGTGAAGGGCAGAAACTGGGGCAGCCAAACGGCTGGCAGAGGCCAGCTAGCAAGTACCCGATGCCC------------ACTCCATAGAGGACTCCACACTTGAAAGACAAGGTAAGCAAGTGTCAGGCTGCCTCACTCGTTGTCCCCCC----AAATAAAAAAATAAATAAAAGTAACTCCTCCAGGGAAC----GTGTG-TACACACCAAAGTACATGCACACAGCTACACGCAAAGAGGAAAGGCTGGGAAGCAGTCAAACCCACCTCTGAACACCAGTTACTTGTGGGGAAGGAGCAGGTGAAGCCGGTTGCCAGCATTATTCACCTTTTCCACTCATGAGCTTGCATCAGTTTTGGCAATTTCTCAT-------AAAGGCAATTTTTACTCCCT-GGTGATCACCCAGGTCCCGCAAAACTGAGCCACCAACAACCACCTGCACCATTTCCCATGAGGCCAAATAATGGCTTCCCTCAAAGCTCAGCCCTCCCACCCACCTCCCAGTCCT-GTCCCACGCAGGGGG-TACTGGCCTCCTGGGGTTCAGGAATCCAGGCCAAACCCAACCCATAGATGGTTGGTGAAACCAGCATGTATCCAAGGGCCTTTCCCCAAGCTG-GACCGTGTGCCCACTGCATAGATATGCCTGTGCTTGCTCCCCTAGGACAGAAGACTCCCTTTTCCT-AC i macNem1.NW_012018355v1 C 0 I 1 s cerAty1.NW_012001209v1 105796 738 - 1981259 CACTTGTCTCATCATGCTAGTTGCCAACAAGGCCAC-TGAATGTCACAGCAGGTGGCCAGCGTGTCTGTGAAGGGCAGAAACTGGGGCAGCCAAACGGCTGGCAGAGGCCAGCTAGCAAGTACCAGATGCCCactccatagaggactccatagaggactccaCACTTGAAAGACAAGGTAAGCAAGTGTCAGGCTGCCTCACTCGTTGTCCCCCC----AAAAAATAAAT-AAATAAAAGTAACTCCTCCAGGGAAC----GTGTG-TACACACCAAAGTACATGCACACAGCTACACGCAAAGAGGAAAGGCTGGGAAGCAGTCAAACCCACCTTTGAACACCAGTTACTTGTGGGGAAGGAGCAGGTGAAGCCGGTTGCCAGCATTACTCACCTTTTCCACTCATGAGCTTGCATCAGTTTTGGCAATTTCTCAT-------AAAGGCAATTTTTACTCCCT-GGTGATCACCCAGGTCCTGCAAAACTGAGCCACCAACAACCACCTGCACCATTTCCCATGAGGCCAAATAATGGTTTCCCTCAAAGCTCAGCCCTCCCACCCACCTCCCAGTCCT-GTCCCATGCAGGGGGGTACTGGCCTCCTGGGGTTCAGGAGTCCAGGCCAAACCCAACCCACAGATGGTTGGTGAAACCAGCATGTATCCAAGAGCCTTTCCCCAAGCTG-GACCGTGTGCCCACTGCATAGATATCCCTGTGCTTGCTCCCCTAGGACAGAAGACTCCCTTTTCCT-AC i cerAty1.NW_012001209v1 C 0 I 1 s chlSab2.chr12 16550 727 + 108555830 CACTTGTCTCATCATACTAGCTGCAAACAAGGCCAC-TGAATGTCACACCAGGTGGCCAGCATGTCTGTGAAGGGTGGAAACTGGGGCAGCCAAACAGCTGGCAGAGGCCTGCTAGAAAGTCCCCAGTGCCC------------ACTCCATAGAGGACTCCACACTTAAAAGACAAGATAAGCAAGTGTCAGGCTGCCTCACTAGTTATGCTCCC----AAATAAAA----AAATAAAAGTAACCCCTCCAGGGAAC--GTGTGTG-TACACACAAAAGTACATGCACACAGCTACATGCAAAGGGGAAAGGCTGGGAAGGAAACAAATCCACCTCTGAACACGAGTTGCTTGTGGGGAAGGGGCAGGTGAAGCCAGCTGTCCACATTACTCACCTTTTCAACTGATGAGCTTGCATCAACTTTGGCAATTTCTCAT-----AAAAAGGCAATTTTCACTCCTTGGGTGATCACCCAGGTCCTGCAAAACTGAGCCAATAATAACCACCTGCACCACTTCCCATGAGGCCAAATAATGGCTTCCCTCAAAGCTCAGCCGTCCCCCCCACCTCCCAGTCCT-GTCCCATGCAGGGGGCTACCGGCCTCCTGGGGTACAGGGGTCCAGGCCAAACCCAACCCACAGATGGTTGGTGAAACCAGCATGTATCCAAGGGCCTTTCCCCGACCGG-GGCCGTGTGCCCACTGCATAGATAGGCCTGTGCTCGCTCCCCTAGGACAG-AGACTCCCTTTTCTT-CA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012098222v1 117615 740 + 458990 CACTTGTCTCATCATGCTAGTTGCAAACAAGGCCAC-TGAATGTCACAGCAGGTGGCCAGTGTGTCTGTGAAGGGCAGAAACTGGGGCAGCCAAACGGCTGGCAGAGGCCAGCTAGCAAGTACCAGATGCCCACTTcatagaggactccatagaggactccaCACTTGAAAGACAAGGTAAGCAAGTGTCAGGCTGCCTCACTCGTTGTCCCCCCAAATAAATAAAT----AAATAAAAGTAACTCCTCCAGGGAAC----GTGTG-TACACACCAAAGTACATGCACACAGCTACACGCAAAGAGGAAAGGCTGGGAAGCAGTCAAACCCACCTCTGAACACCAGTTACTTGTGGGGAAGGGGCAGGTGAAGCCGGTTGCCAGCATTACTCACCTTTTCCACTCATGAGCTTGCATCAGTTTTGGCAATTTCTCAT-------AAAGGCAATTTTTACTCCCT-GGTGATCACCCAGGTCCTGCAAAACTGAGCCACCAACCACCACCTGCACCATTTCCCATGAGGCCAAATAATGGCTTCCCTCAAAGCTCAGCCCTCCCACCCACCTCCCAGTCCT-GTCCCATGCAGGGGGGTCCTGGCCTCCTGGGGTTCAGGAGTCCAGGCCAAACCCAACCCACAGATGGTTGGTGAAACCAGCATGTATCCAAGGGCCTTTCCCCAAGCTG-GACCGTGTGCCCACTGCATAGATATGCCTCTGCTTGCTCCCCTAGGACAGAAGACTCCCTTTTCCTACA i manLeu1.NW_012098222v1 C 0 C 0 s colAng1.NW_012114821v1 18467 727 + 20575453 CACTTGTCTCATCATACTAGCTGCAAACAAGGCCAC-TGAATATCACACCAGGTGGCCAGCATGTCTGTGAACGGCAGAAACTGGGGCAGCCAAACAGCTGGCAGAGGCCAGCTAGTAAGTCCCCGATGCCC------------ACTCCATAGAGGATTCCACACTTAAAAGACAAGATAAGCAAGTGTCAGGCTACCTCACTAGCTATCCCCCC----AAATAAAA----AAGTAAAAGTAACCCCTCCAGGGAAC--GTGTGTG-TACACACAAAAGTACGTGCACACAGCTACATGCAAAGGGGAAAGGCTGGGAAGGAACAAAATCCACCTCTGAACACCAGTTACTTGTGGGGAAGGGGCAGGTGAAGCCGCCTGTCCACATTACTCACCTTTTCAACTGATGAGCTTGCATCAATTTTGGCAATTTCTCAT-----AAAAAGGCAATTTTCATTCCTTGGGTGATCACCCAGGTCCTGCAAAACTGAGCCACCAACAACCACCTGCACCACTTCCCATGAGGCCAAATAATGGCTTCCCTCAAAGCTCAGCCCTCCCACCCGCCTCCCAGTCCT-GTCCCATGCAGGGGGCTAGCGGCCTCCTGGGGTACAGGGGTCCAGGCCAAACCAAACCCACAGACAGCTGGTGAAACCAGCATGTATCCAAGGGCCTTCCCCCAACCTG-GGCCACGTGCCCACTGCACAGATATGCCTGTGCTCGCTCCCCTAGGACA-GAGACTCCCTTCTCTT-CA i colAng1.NW_012114821v1 C 0 I 55 s calJac3.chr13 21624 647 - 117903854 CACTAGTCTCATCATACTAGCCACGAACAAGCCCACATGAATGTCACACTGAGTGGCCAGCATGTCTGTGAAGAGCAGAAACCGGGGCAGCCAAACAGCT----AAGGCCAGCTAGTAAGTACCCGATGCCC------------ACTCTATAGAGGACTCCACACT--CAAGACAGGGTAAGAAAATGCCAGGCTGTGTCA----TTATTCCCCC--------CAAA----CAAAAAAAGTAACCCCGCCAGGAAACATGTGTGTG-TACACACCTAAGTACATGCACACAGCTACATGCAACGGGGAAAGGCCGGGAAGGAACCAAATCCACCTCTGAACACCACTTACTTCTGAGGAAAAGCCAGGTGAGGACGACTACCAGCATTCCTCGTCTTTTGAACTGGTGAGCTTGTGTCAATTTTGGC-----TTTTT-----TTAAAGGCAATTTGTACTCCTTGTGTGATCACACAAGCCCTACAAAACTGAACCATTAACAACCAC-------------------------------CTTCCCATGAGGCCAAAC----------------------------------AATGGCTACTGGCCTCCAGGGGTACAGGAGTCCAGGCCAAACCCATGCCACAGATTCCCAGTGAAACCAGCACGTATCCAAGGACCTTTCCCCCTCCTG-GGTCATGTGCTCACTGCACAAATATGCCTGTGCTTGCTCCCCGAAGACA-GAGACTCCCTTTTATT-AC i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107942v1 55214 699 - 883013 CACTAGTCTCATCATACTAGCTGCGAACAAGCCCAC-TGAATGTCACACTGGGTGGCCAGCATGTCTGTGAAGAGCAGAAACTGAGGCAGCCAAACAGCT----AAGGCCAGCTAGTAAGTACCCTATGCCC------------ACTCTATAGAGGACTCCACACT-AAAAGACAAGGTAAGCAAATGCCAGGCTGCTTCACCAGTTATTCCCCC----------AA----ATAAAAATGTAACCCCGCCAGGAAACGTGTGTGTG-TACACATCTAAGTGCATGCACACAGCTACATGCAAAGGAGAAAGGCTGGGAAGGAACCAAATCCACCTCTGAACACCACTTACTTCTGGGGAAAAGGCAGGTGAGGACAACTACCAGCATTCCTCACCTTTTCAACTGGTGAGCTTGTGTCAATTTTGGCTTCTTTTTTT-----TTAAAGGCAATTTGCACTCCTTGGGTGATCATGCAAGCCCTGCAAAACTGAACCATCAACAACCAC---------------------CAAACAATGGCTTCCCTCAAAGCTCAGCCCACCCACCCACCTCCCAGTCCTGGTCCCATGCAGGGGGCTACTGGCCTCCAGGGGTACAGGAGTCCAGGACAAACCCACACCACAGATTCCTAGTGAAACCAGCATGTATCCAAGGACCTTTCCCCCACCTGAAGTCATTTGCCCACTGCACAAATATGCCTGTACTTGCTCCCCTAGGACA-CAGACTCCCTTTTATT-AG i cebCap1.NW_016107942v1 N 0 C 0 a score=13463.000000 s hg38.chr3_KI270784v1_alt 112001 2 + 184404 -AT s panTro5.chr3 2399 2 - 202621043 -GT i panTro5.chr3 C 0 C 0 s panPan2.chr12 80695488 2 - 135337776 -GT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 15934 2 + 508821 -GT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44662104 2 + 86207423 -GT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 52404 2 - 204787373 -GT i rheMac8.chr2 C 0 I 605 s macFas5.chr6 3942 2 - 181584905 -GT i macFas5.chr6 I 165 C 0 s macNem1.NW_012018355v1 111309 2 - 5309094 -GT i macNem1.NW_012018355v1 I 1 C 0 s cerAty1.NW_012001209v1 106535 2 - 1981259 -GT i cerAty1.NW_012001209v1 I 1 C 0 s chlSab2.chr12 17277 2 + 108555830 -GT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012098222v1 118355 2 + 458990 -GT i manLeu1.NW_012098222v1 C 0 C 0 s colAng1.NW_012114821v1 19249 2 + 20575453 -GC i colAng1.NW_012114821v1 I 55 C 0 s calJac3.chr13 22271 3 - 117903854 AGT i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107942v1 55913 3 - 883013 AGT i cebCap1.NW_016107942v1 C 0 C 0 a score=772887.000000 s hg38.chr3_KI270784v1_alt 112003 121 + 184404 TGGAATGAGGGGTGGGGAGATTTGATGGT-------------------------------------------------------GTCCTGTACAGGTTGGGTGTTAATCTGATGTGGTGCTCTTGGAGAAGCTTGCTTGAGTTTGGCGCTTTCTCAGCACGTG--TTGTGTGCTGCCC s panTro5.chr3 2401 121 - 202621043 TGGAATGAGGGGTGGGGAGATTTGATGGT-------------------------------------------------------GTCCTGTACAGGTTGGGTGTTAATCTGATGTGGTGCTCTTGGAGAAGCTTACCTGAGTTAGGTGCTTTCTCAGCACGTG--GTGTGTGCTGCCC i panTro5.chr3 C 0 C 0 s panPan2.chr12 80695490 123 - 135337776 TGGAATGAGGGATGAGGAGATTTATTGGT-------------------------------------------------------ATCCTGTACAGGTTGGATGTTAACCTGATGTGGTGCTCTTGGAGAAgcttgcctgagttaggcactttctcagcatgtggtgtgtgtgctgtcc i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 15936 120 + 508821 TGGAATGAGGGGTGGGGAGATTTG-TGGT-------------------------------------------------------GTCCCGTACAGGTTGGGTGTTAATCTGATGTGGTGCTCTTGGAGAAGCTTGCTTGAGTTCGGCGCTTTCTCAGCATGTG--GCGTGTGCTGCCC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44662106 121 + 86207423 TGGAATGAGGGGTGGGGAGATTTGATGGT-------------------------------------------------------GTCCTGTACAGGTTGGATGTTAATCTGCTGTGGTGCTCTTGGAGAAGCTTGCCTGAGTTCAGCGCTTTCTCACCACGTG--GTGTTTGCTGCCC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 53011 120 - 204787373 TGGAATGAGGGATGGGGAGATTTGATGGT-------------------------------------------------------GTCCTGTACAGGTTGGATGCTATTCTGATGAGGTGCTCTTGGAGAAGCTTGCCTGAGTTCCGCACTTTCTCAGCACGTG--ATGTGTGCTG-CT i rheMac8.chr2 I 605 C 0 s macFas5.chr6 3944 108 - 181584905 TGGAATGAGGGATGGGGAGATTCGATGGT-------------------------------------------------------GTCCTGTACAGGTTGGATGCTAA-------------TCTTGGAGAAGCTTGCCTGAGTTCTGCGCTTTCTCAGCACGTG--GTGTGTGCTGCCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 111311 121 - 5309094 TGGAATGAGAGATGGAGAGATTTGGTGGT-------------------------------------------------------GTCCTCTACAGGTCGGATGTTAATATGATGTGGTGCTCTTGGAAAAGCTTGCCTGAGTTAGGCGCTTTCTTAGCATGTG--GTGTGTGCTGCCC i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 106537 121 - 1981259 TGGAATGAGAGATGGAGAGATTTGGTGGT-------------------------------------------------------GTCCTCTACAGGTCGGATGTTAATATGATGTGGTGCTCTTGGAAAAGCTTGCCTGAGTTAGGCGCTTTCTTAGCATGTG--GTGTGTGCTGCCC i cerAty1.NW_012001209v1 C 0 C 0 s chlSab2.chr12 17279 176 + 108555830 TGGAATGAGGGATGGGGAGATTCGATGGTGTCCTGTACAGGTTGGTTTCTTTGGCTGGAATGAGGGATGGGGAGATTCGATGGCGTCCTGTACAGGTTGGATGCTAATCTGATGAGGTGCTCTTGGAGAAGCTTGCCTGAGTTCGGTGCTTTCTCAGCACGTG--GTGTGTGCTGCCC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012098222v1 118357 121 + 458990 TGGAATGAGAGATGGAGAGATTCGGTGGT-------------------------------------------------------GTCCTCTACAGGTCGGATGTTAATATGATGTGGTGCTCTTGGAAAAGCTTGCCTGAGTTAGGCGCTTTCTTAGCATGTG--GTGTGTGCTGCCC i manLeu1.NW_012098222v1 C 0 N 0 s colAng1.NW_012114821v1 19251 121 + 20575453 TGGAAAGAGGGATGGGGAGATTTGATGGT-------------------------------------------------------GTCCTGTACAGGTTGGATGCTATTCTGATGAGGTGCTCTTGGAGAAGCTTGCCTGAGTTCGGTGCTTTCTCAGCACGTG--GTGTGTGCTGCCC i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 22274 120 - 117903854 TGCAATGAGGAATAGGGAGATCTGATGCT-------------------------------------------------------GTCCTGTACA-GTTGGATGTTAATCTGATGTGGTGCTGTCGGAGAAGCTTGCCTGACTCAGGTGCATTCTCAGCATATA--ATGTACGCTCTCC i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107942v1 55916 121 - 883013 TGCAATGAGGAATAGGGAGATCTGATGCT-------------------------------------------------------GTCCTATACAGGTTGGATGTTAATCTGATGTGGTGCTGTTGGAGAAGCTTGCCTGAGTCAGGTGCATTCTCAACCCATG--ATGTATGCTCTCC i cebCap1.NW_016107942v1 C 0 C 0 a score=661564.000000 s hg38.chr3_KI270784v1_alt 112124 97 + 184404 CTTCAATCTGCAGGAGTCCCAGAAGGTAAGTGCTGCTGCAACCCCCATTTACTGGTGAACAGAGGTCAGGTGATCTGCAGCCGACCGAGCAG--CTGCT s panTro5.chr3 2522 96 - 202621043 CTTCAAGCTGCAGGAGTCCCAGAA-GTAAGTGCTACTGCAACCCCCATTTACTGGTGAACAGATGTCAGGTGATCTGCAGCTGACCAAGCAG--CTGCT i panTro5.chr3 C 0 I 2 s panPan2.chr12 80695613 97 - 135337776 cttcaagctgcagaagtcccagaaggtaagtgcttctgcaacccccatttactggtgagcaggggtcaggtgacctgcatctggccaaacag--ctgct i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 16056 96 + 508821 CTTCAATCTGCAGGAGTCCCAGAAGGTAAGTGCTGCTGCAACCCCCATTTACTGGTGAACAGAGGTCAGGTGATCTGCAGCCCA-CGAGCAG--CTGCT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44662227 97 + 86207423 CTTCAAGCTGTAGGAGTCCCAGAAGGTAAGTGCTACTGCAACCCCCATTTACTGGTGAACAGAGGTCTGGTGATCTGCAGCCGGCCAAGCAG--CTGCT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 53131 97 - 204787373 CTTCAAGCTTCAGAAGTCCCAGAAGGAAAGTGCTTCTGTAACCCCCATTTACTGGTGAACAGAGGTCAGGTGGTTTGCAACCGGCCAGGCAG--CTGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr6 4052 99 - 181584905 CTTCGAGCTTCAGAAGTCCTGGAAGGAAAGTGCTTCTGCAACCCCCATTTACTGGTGAACAGAGGTCAGGTGGTTTGCAGCTGGCCGAGCAGCTCTGCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 111432 97 - 5309094 CTTCAAGCTACTGAAGTCCCAGAAGATAAGGGCTTCCGGAACCCCCATCTACTGGTGAGCAGAGGTCAGGTGATCTGCAGCCAGCCAAGCAG--CTGCT i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 106658 97 - 1981259 CTTCAAGCTACTGAAGTCCCAGAAGATAAGGGCTTCTGCAACCCCCATCTACTGGTGAGCAGAGGTCAGGTGATCTGCAACCAGCCAAGCAG--CTGCT i cerAty1.NW_012001209v1 C 0 C 0 s chlSab2.chr12 17455 97 + 108555830 CTTCGAGCTTCAGAAGTCCCAGAAGGAAAGTGCTTCTGTAACCCCCATTTACTGGTGAACAGAGGTCAGGTGGTCTGCAGCTGGCCCAGCAG--CTGCT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 3374 97 + 85016 CTTCAAGCTTCAGAAGTCCCAGAAGGAAAGTGCTTCTGTAACCCCCATTTACTGGTGAACAGAGGTCAGGTGGTTTGCAACGGGCCAAGCAG--CTGCT i manLeu1.NW_012101680v1 N 0 C 0 s colAng1.NW_012114821v1 19372 97 + 20575453 CTTCCAGCTTCAGAAGTCCCAGAAGGAAAGTGCTTCTGCAACCCCCATTTACTGGTGAACAGAGGTCAGGTGGTTTGCAGCCGCCCGAGCAG--CTGCT i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 22394 97 - 117903854 CTTCAAGTTGCAGGAGTCTAAAAAGGCAAGTGCTACTGCAAGCCCCATTTACTGGTGAGCAGAGGTCAGGTGAACTGCAGCTGGCCAAGCAG--CTGCT i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107942v1 56037 96 - 883013 CTTCAAGTTGCAGGAGTCCCAGAAGGTAAGTGCTGCTGCAACCCCCATTTACTGGTGAGC-GAGGTCAGGTGATCCGCAGCTGGCCAAGCAG--CTGCT i cebCap1.NW_016107942v1 C 0 C 0 a score=1656298.000000 s hg38.chr3_KI270784v1_alt 112221 282 + 184404 GAGTGGCCAACAGGCGGGATCTGTATCTAACTTGCAGAGGCCCTGCCTGGATGCTGGGGCTGCCCT-GAGACTC---------------CCTCCACCTCCTCTTCCCTCCACAGCTCTCCCGGCTTCTATCCACAGCTGTGCTCCAGGTGGGGAACACCTGTGGATACACCAGGGTGCAACTACTC--AGAGTCCAGTGTGCAGAAGGGCCCCTGCTCTATGCTGTTTCCGTATCCAAGCCCAAGCTCGTCTACAGCTTCAGCAAATCCAAGCCTCCCTGAATTCCCCGC-AAGACCAAAC s panPan2.chr12 80695710 288 - 135337776 aagtggccaagaggctagatctgcatcTCACTTGCAGAGGCCCTGCCT---------GGCTGCTCT-GAGAATCATTCTGcctcctcctcctcctcctcctcttccctccccagctctcctGGCTTCTATCCACAGCTGTGCTCCAGGTGGGGAACACCTATGGATGCACCAGGGTGCAACTACTC--AGACTGCAGCATGCAGAAGGGCCCGGGCTCTATGCTATTTCCATATCCAAGCCCAAGCTCGTCTAGAGCTTCCACAAATCCAAGCCTCCGTGAATTCCCTGC-AAGACCGAAC i panPan2.chr12 C 0 I 2 s gorGor5.CYUI01015884v1 16152 280 + 508821 AAGTGGCCAACAGGCGGGATCTGCATCTCACTTGCAGAGGCCCTGCCTGGATGCTGGGGCTGCCCT-GAGACTC---------------CCTCCTCCTCCTCTTCCCTCCACAGCT-TCCCGGCTTCTATCCACAGCTGTGCTCCAGGTGGGGAACACCTGTGGATACACCAGGGTGCAACTACTC--AGAGTCCAGTGTGCAGAAGGGCCCCTGCTCTATGCTGTTTCCATATCCAAGCCCAAGCTCGTCTACAGCTTCAGCAAATCCAAGCCTCTCTGAATTCCC-GC-AAGACCAAAC i gorGor5.CYUI01015884v1 C 0 I 2 s nomLeu3.chr21 44662324 282 + 86207423 AAGTGGCCAACAGGCTGGATCTGCATCTCACTTGCAGAGGCCCTGCCTGGCTGCTGGGGCTGCCCT-TAGACTC---------------CCTCCTCCTCCTCTTCCCTCCACAGCTCTCCCTGCTTCTATCCACAGCTGTGCTCCAGGTGGGGAACACCTATGGATGCACCAGGGTGCAACTACTC--AGAGCCCAGTGTGCAGAAGGGCCCCTGCTCTATGCTGTTTCCATATCCAAGCCCAAGTTTGTCTAGAGCTTCGGCAAATCCAAGCCTCCCTGAATTCCCTGC-AAGACCAAAC i nomLeu3.chr21 C 0 I 2 s rheMac8.chr2 53228 285 - 204787373 AAGTGGCCAACAGGCTGGATCTGCGTCTCACTTGCAGAGGCCCTGCCTGGCTGCTGGGGCTGCCCT-GAGACTC------cct------cctcctcctcctcttccctccACAGCTTTCCCGGCTTCTATCCACAGCTGTGCTCCAGGTGGGGAACATCTGTGGGTGCACCAGGGTGCAACGACTC--AGATTCCAGCGTGCAGAAGGGCCCCGGCTCCATGCTGTTTCCATATCCAAGCCCAAGCTCATCTATAGCTTCAGCGAATCCAAGCCTCCCTGAATTCCCTGC-AAGACCAAAC i rheMac8.chr2 C 0 I 2 s macFas5.chr6 4151 282 - 181584905 AAGTGGCCAACAGGCTGGATCTGCGTCTCACTTGCAGAGGCCCTGCCTGGCTGCTGGGGCTGCCCT-GAGACTC---------------CCTCCTCCTCCTCTTCCCTCCACAGCTTTCCCGGCTTCTATCCACAGCTGTGCTCCAGGTGGGGAACATCTGTGGGTGCAGCAGGGTGCAACTACTC--AGAGCCCAGCATGCTGAAGGGCCCCTGCTCTATGCTGTTTCCATATCCAAGCCCAAGCTCATCTATAGCTTCAGCAAATCCAAGCCTCCCTGAATACCCTGC-AAGACCAAAC i macFas5.chr6 C 0 I 2 s macNem1.NW_012018355v1 111529 281 - 5309094 TACTGGCCAACAGGCTGGATCTGCATCTCACTTGCAGAGGCCCTGCCTGGCTGCTGGGGTTGCCCT-GAGACTC---------------CTTCTGCCTCCTCTTCCCTCCACAGCTCTCCCGGCTTCTATTCACAGCTGTGCTCCAGGTGGGGAACACCTATGGATGCACAAGGGGGCAACTCCGC--AGACTCCAGTGTGCAGAAGGGCCCCGGCTCCATGCTGTTTCCATTTCCAAGCCCAAGCTT-CATAGAGCTTCAGCAAATCCAAACCTCCCTGAATTCCCTGC-AAGACCAAAC i macNem1.NW_012018355v1 C 0 I 2 s cerAty1.NW_012001209v1 106755 289 - 1981259 TACTGGCCAACAGGCTGGATCTGCATCTCACTTGCAGAGGCCCTGCCTGGCTGCTGGGGCTGCCCT-GAGGCTCGTACTGCCT------CCTCCTCTTCCTCTTCCCTCCACA-CTCTCCCAGCTTCTATCCACAGCTGTGCTCCGGGTGGGGAACACCTATGGATGCACAAGGGGGCAACTCCAC--AGACTCCAGTGTGCAGAAGGGCCCCGGCTCCATGCTGTTTCCATATCCAAGCCCAAGCTT-CATAGAGCTTCAGCAAATCCAAACCTCCCTGAATTCCCTGC-AAGACCAAAC i cerAty1.NW_012001209v1 C 0 I 2 s chlSab2.chr12 17552 282 + 108555830 AAGTAGCCAACAGGCTGGATCTGCCTCTGGCTTGTGGAGGCCCTGCCTGGCTGCTGGGGCTGCCCT-GAGCCTC---------------CCTCCTCCTCCTCTTCCCTCCACAGCTCTCCCATCTTCTGTCCACAGCTGTGCTCCAGGTGGGGAACACCTGTGGGTGCACCAGGGTGCAAATACTC--AGACTCCAGCATGCAGAAGAGCCCCGGCTCCCTGCTGTTTCCATATCCAAGCCCAAGCTTGTCTAGAGCTTCAGCAAATCCAAGCCTCCCTGAATTTCCTTT-AAGACCAAAC i chlSab2.chr12 C 0 I 2 s manLeu1.NW_012101680v1 3471 282 + 85016 AAGTGGCCAACAGGCTGGATCTGCATCTCACTTGCAGAGGCCCTGCCTGGCTGCTGGGGCTGCCCT-GAGACTC---------------CCTCCTCCTCCTCTTCCCTCCACAGTTTTCCCGGCTTCTATCCACAGCGGTGCTCCAGGTGGGGAACACCTGTGGGTGCACCAGGGTGCAACTACTC--AGATTCCAGCGTGCAGAAGGGCCCCGGCTCCATGCTGTTTCCATATCCAAGCCCAAGCTCATTTATAGCTTCAGCGAATCCAAGCCTCCCTGAATTCCCTGC-AAGACCAAAC i manLeu1.NW_012101680v1 C 0 I 2 s colAng1.NW_012114821v1 19469 281 + 20575453 AAGTGGCCAACAGGCTGGATCTGTGTCTCACTTGCAGAGGCCCTGCCTGGCTGCTGGGGCTGCCCT-AAGACTC---------------CCTCCTCCTCCTCTTCCCTCCACAGCTTTCCCAGCTTCTATCCACAGCTGTGCTCCAGGTGGGGAACACCTGTGGGTGGACCA-GGTGCAACTACTC--AGAGCCCAGTGTGCTGAAGGTCCCCTGCTCTATGCTGTTTCCATATCCAAGCCCAAGCTTGCCTATAGCTTCAGCAAATCCAAGCCTCCCTGAATTTCCTGC-AGGACCAAAC i colAng1.NW_012114821v1 C 0 I 2 s calJac3.chr13 22491 292 - 117903854 AAGTGGCCCACGGGCCGGATCTGCATCTCACTTGCAGAGTCCCTTCCTGGCTGCTGGGGCTGCCCTGGAGACTCATCCTG---------CCTCCTCCTCCTCCTCCCTCCACAATGATGCTTGCTTCTAGCCACAGCTGTACTCCAGGTGGAGAACACCTATAAATGCACCAGGGTGCAACTACTCAAAGACTCCAGCGTGCAGAAGGGCCCCTGCTCCACGTCATTCCCATATTCAAGCCCAAGCTCATCTAGGGCTCCAGCAAATGCAAGCCTCCCTCAATTCCCTGCTGAAACCAAGC i calJac3.chr13 C 0 I 2 s cebCap1.NW_016107942v1 56133 292 - 883013 AAGTGGCCCACAGGCCAGATCTGCATCTCACTTGCAGAGTCCCTTCCTGGCTGCTGGGGCTGCCCTGGAGActcttcctg---------cctcctcctcctcttccctccATGATGATGCCGGCTTCTATCCACAGCTGCACTCCAGGTGGGGAACACCTGTGGATGCACCAGGGTGCAACTACTCAAAGACTCCAGCATGCAGAAGAGCCCCTGCTCCACGTCATTCCCATATCCAAGCCCAAGCTCATCTAGGACTTCAGCAAATCCAAGCCTCCCTGAATTCCCTGCTGAGACCAAGC i cebCap1.NW_016107942v1 C 0 I 18 e panTro5.chr3 2618 2 - 202621043 I a score=77321.000000 s hg38.chr3_KI270784v1_alt 112503 15 + 184404 AGCCCTACAACACCC s panPan2.chr12 80696000 15 - 135337776 AGCCCTACAACCCCC i panPan2.chr12 I 2 I 1 s gorGor5.CYUI01015884v1 16434 15 + 508821 AGCCCTACAACTCCC i gorGor5.CYUI01015884v1 I 2 C 0 s nomLeu3.chr21 44662608 15 + 86207423 AGCCCTACAACCCCC i nomLeu3.chr21 I 2 C 0 s rheMac8.chr2 53515 15 - 204787373 AGCCCTACAACCCCC i rheMac8.chr2 I 2 C 0 s macFas5.chr6 4435 15 - 181584905 AGCCCTACAACCCCC i macFas5.chr6 I 2 C 0 s macNem1.NW_012018355v1 111812 15 - 5309094 AGCCCTACAACCCCC i macNem1.NW_012018355v1 I 2 C 0 s cerAty1.NW_012001209v1 107046 15 - 1981259 AGCCCTACAACCCCC i cerAty1.NW_012001209v1 I 2 C 0 s chlSab2.chr12 17836 15 + 108555830 AACCCTACAACCCCC i chlSab2.chr12 I 2 C 0 s manLeu1.NW_012101680v1 3755 15 + 85016 AGCCCTACAACCCCC i manLeu1.NW_012101680v1 I 2 C 0 s colAng1.NW_012114821v1 19752 15 + 20575453 AGCCCTACAACCCCC i colAng1.NW_012114821v1 I 2 C 0 s calJac3.chr13 22785 14 - 117903854 AGTCGTATGACTCC- i calJac3.chr13 I 2 C 0 e cebCap1.NW_016107942v1 56425 18 - 883013 I e panTro5.chr3 2618 2 - 202621043 I a score=16194.000000 s hg38.chr3_KI270784v1_alt 112518 3 + 184404 ACC s panPan2.chr12 80696016 3 - 135337776 ACT i panPan2.chr12 I 1 C 0 s gorGor5.CYUI01015884v1 16449 3 + 508821 ACC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44662623 3 + 86207423 ACC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 53530 3 - 204787373 ACT i rheMac8.chr2 C 0 C 0 s macFas5.chr6 4450 3 - 181584905 ACT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 111827 3 - 5309094 ACT i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 107061 3 - 1981259 ACT i cerAty1.NW_012001209v1 C 0 C 0 s chlSab2.chr12 17851 3 + 108555830 ACC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 3770 3 + 85016 ACT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 19767 3 + 20575453 ACT i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 22799 3 - 117903854 GCT i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107942v1 56443 3 - 883013 ACT i cebCap1.NW_016107942v1 I 18 C 0 e panTro5.chr3 2618 2 - 202621043 I a score=1996888.000000 s hg38.chr3_KI270784v1_alt 112521 295 + 184404 ACTCTGGTTAGCTGCCAGTCCCAGCCCCTGTTCCCTCCTGGACCCCTGTCTGTACAGTTCTGAAGTCCTACAAGAATGTTGAGATCCTAAGCTGACTCTCACCCAAAGAGGTAAACAA-------CCAGGGGCCTCC-AGGTGGAGAGAACATACCCAGACAGGTTCTGCTGCCTGTAGGCTTGATGTCC-TTCCCCTACAACACGACTTGCTTGCCAGGCTGGAA-GAGGGGCTCCAGAAACTTGGGAAACCTGGGCCTGTAGCTGGCATGTGGAAAAGAGGCCTGGAAAAGCACCACTCCTGT s panTro5.chr3 2620 285 - 202621043 ACTCTGGTTAGCTGCCAGTCCCAGCCCCTGTTCCCTCCTGGGCCCCTGTCTGTACAGTTCTGAAGTCCTACAAGAATGTTGAGATCCTAACCCGACTCTCACCCAAAGAGGTAAACAA-------CCAGGGGCCTCC-AGGGGTAGAGAACATAC----------TCTGCTGCCTGTAGGCTTGATGTCC-TTCCCCTACGACACGCCTTGCTTGCCAGGCTGGAA-GAGGGGCTCCAGAAACTCGGGAAACCTGGGCCTGTAGCTGGCACGTGGAAAAAAGGCCTGGAAAAGCACCACTCCTGT i panTro5.chr3 I 2 C 0 s panPan2.chr12 80696019 295 - 135337776 ACACTGGTTAGCTGCCAGTCCCAGCCCCTGCTCCCTCCTGGGCCCTTGTCTGTACAGTTCTGAAGTCCTGCAAGAATGTTGAGGTCCTAAGCTGACTCTCACCCAAAGAGGTAAACAA-------CCAGGGGCCTCC-AGGTGTAGAGAACATACCCAGACAGGTTCTGCTGCCTGTAGGCTTGATGTCC-TTCCCCCACAACATGCCTTACTTGCCAGGCTGGAA-GGGGGGCTCCAGAAACTTTGGAAACCTGGGCCTGTAGCTGGCATATGGAAAAGAGGCCTGGAAAAGCACTACTCCTGT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 16452 292 + 508821 ACTCTGGTTAGCTGCCAGTCCCAGCCCCTGTTCCCTCCTGGGCCCCTGTCTGTACAGTTCTGGAGTCCTACAAGAATGTTGAGATCCTAAGCTGACTCTCACCCAAAGAGGTAAACAA-------CCAGGGGCCTCC-AGGTGGAGAGAAC-TACCTAGAC--GTTCTGGTGCCTGTAGGCTTGATGTCC-TTCCCCTACAACACGACTTGCTTGCCAGGCTGGAA-GAGGGGCTCCAGAAACTTGGGAAACCTGGGCCTATAGCTGGCATGTGGAAAAGAGGCCTGGAAAAGCACCACTCCTGT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44662626 291 + 86207423 ACTCTGGTTAGCTGCCAGTCCCAGCTCCTGTTCCCTCCTGGGCCACTGTCTGTACAGTTCTGAAGTCCTGCAAGAATGTTGAGATCCTAAGCTGACTCTCATCCAAAGAGGTAAACAA-------CCAGGGGCCTCC-AGGT-TAGAGAACATACCCAGACAGGTTCTGCTGCCTGTAGGTTTGATGTCC-TTCCCCTACAACACGCCATGCTTGCCAGGCTGGAA-GAGGGGCTCCAGAAACTTGGGAAACCTGGGCCTGTAGCTGGCATATGGAAAA---GCCTGGAAAAGCACCACTCCTGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 53533 292 - 204787373 ACACTGGTTAGCTGCCAGTCCCAGCCCCTGCTGCCTCCTGAGCCGCTGTCTGTACAGTTCTGAAGTCCTTCAAGAATGTTGAGATCCTAAGCTGACTCTCACCCCAAGAAGTAAACAA-------CCAGGGGCCTCC-AGGGGTAGAGAACATACCCAGACAGGTTCTGCTGCCTGTAGGCTTGATGTCC-TTCCCCTACAACACACCATGCTTGCTGGGCTGGAA-GAGGGGCTCCAGAAACTTGGGAAACCTGGGCCTATAGATGGCATGTGGAAAAGAGGCCTGGAAAAG---TACTCCTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr6 4453 295 - 181584905 ACACTGGTTAGCTGCCAGTCCCAGCCCCTGCTGCCTCCTGAGCCACTGTCTGTATAGTTCTGAAGTCCTTCAAGAATGTTGAGAACCTAAGCTGACTCTCACCCAAAGAGGTAAACAA-------CCAGGGGCCTCC-AGGGGTAGAGAACATACCCAGACAGGTTCTGCTGCCTGTAGGCTTGATGTCC-TTCCCCTACAACACACCATGCTTGCCAGGCTGGAA-GAGGGGCTCCAGAAACTTGGGAAACCTGGGCCTGTATCTGGCATATGGAAAAGAGGCCTGGAAAAGCACCACTCCTGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 111830 291 - 5309094 ACACTGGTTAGCTGCCAGTCCCAGCCCCTGCTCCCTCATGGG---CTGTCTGTACAGTTCTGAAGTTCTACAAGAATGTTGAGGTCCTAAGCCAACTCTCACCCAAAGAGGTAAACAA-------CCCGGGGCCTCC-AGGGGCAGAGAACATACCCAGACAAGTTCTGCTGCCTATAGGCTTGATGTCC-TTCCCCTACAACAGGCCATGCTTGCCAGGTTGGGA-GGGGGGCTCCAGAAACTTGGGAAACCTGGGCCTGAAGCTAGCATATAGAAAAG-GGCCTGGAAAAGCACCACTCCTGT i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012001209v1 107064 292 - 1981259 ACACTGGTTAGCTGCCAGTCCCAGCCCCTGCTCCCTCATGGG---CTGTCTGTACAGTTCTGAAGTTCTACAAGAATGTTGAGGTCCTAAGCCAACTCTCACCCAAAGAGGTAAACAA-------CCCGGGGCCTCC-AGGGGCAGAGAACACACCCAGACAAGTTCTACTGCCTATAGGCTTGATGTCC-TTCCCCTACAACAGGCCATGCTTGCCAGGTTGGGAGGGGGGGCTCCAGAAACTTGGGAAACCTGGGCCTGAAGCTGGCATATGGAAAAG-GGCCTGGAAAAGCACCACTCCTGT i cerAty1.NW_012001209v1 C 0 N 0 s chlSab2.chr12 17854 273 + 108555830 ACACTGGTTTGCTGCCAGTCCCAGCCCCTGCTGCCTCCTGGGC----------------------TCCTACAAGAATGTCGAGAATCTAAGCCAACTCTCACCCAAAAAAGTAAACCA-------CCAGGGGCCTCTGGGGGGTAGAGAACATACCCAGACAGGTTCCACTGCCTGTAGGCTTGATGTCCTTTCCCCTACAACACACCATGCTTGCCGGGCTGGAA-GAGGGGCTCCAGAAAC--GGGAAACCTGGGCCTGTAGCTGACGTATGGAAAAGAGGCCTGGAAAAGCACCACTCCTGT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 3773 294 + 85016 ACACTGGTTAGCTGCCAGTCCCAGCCCCTGCTGCCTCCTGAGCCGCTGTCTGTACAGTTCTGAAGTCCTTCAAGAATGTTGAGAACCTAAGCCGACTCTCACCCCAAGAGGTAAACAA-------CCAGGGGCCTCC-AGGGGTAGAGAACATACCCAGAGAGGTTCTGCTGCCTGTAGGCTTGATGTCC-TTCCCCTACAACACGCCACGCTTGCCGGGCTGGAA-GAGGGGCTCCAGAAACTTGGGAAACCTGGGCATGTATCTGGCATATGGAAAAGAGGCCTGGAAAAGCA-CACTCCTGT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 19770 294 + 20575453 ACACTGGTTAGCTGCCAGTCCCAGCCCCTGCTGCCTCCTGAGCCACTGTCTGTATAGTTCTGAAGTCCTTCAAGAATGTTGAGATCCTAAGCCGACTCTCACCCAAAGAGGTAAACAA-------CCA-GGGCCTCC-AGGGGTAGAGAACATACCCAGACAGGTTCTGCTGCCTGTAGGCTTGATGTCC-TTCCCCTACAACACGCCACTCTTGCCAGGCTGGAA-GAGGGGCTCCAGAAACTTGGGAAACCTGGGCCTGTAGCTGGCATATGGAAAAGAGGCCTGGAAAAGCACCACTCCTGT i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 22802 302 - 117903854 ACACTGGCTAGCTGCCCGTTCAAGATGCTGCTCCCTCCGTGGCCCCTGTCTGTACAGTTCTGAAGTCCTACAAGAATATTGAGATCCTAAGCTGACTCTCACCCAAGGAAGTAAACAACTAGGGGCCAGGGGCCACC-AGGGGTAGAGAACATACCCAGACAGGTACTGCTGGCTTCAGGCTGAATGTCC-TTCCCCTACTATTCACCATGCTTGCCAGGCTGGAA-GGGGGACTCCAGAAACTTTGGAAACCCAAGCCTGTAGCTAGCGTATGGATACAATGCCTGGAAGAGCACCACTCCTAT i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107942v1 56446 302 - 883013 ACATTGGTTAGCTGCCAGTTCCAGATGCTGCTCCCTCCTTGGCCCTTGTCTGTACAGCTCTGAAGTCCTCTAAGAATATTGAGATCCTAAGCTGACTCTCACCCAAGGAAGTATACAACTAGGGGCCAGGGGCTGCC-AGGGGTAGAGAACATACCCAGACAGGTACTGCTGCCTTCAGGCTTAACGTCC-TTCCCCTACTATTCGCCATGTTTGCCAGGCTGGAA-GGGGGACTCCAGAAACTTTGGAAATCCAAGCCTGTAGCTAGCGTATGGATACAATGCCTGAAAGAGCACCACTCCTAT i cebCap1.NW_016107942v1 C 0 C 0 a score=1486562.000000 s hg38.chr3_KI270784v1_alt 112816 219 + 184404 CCATGAAGCCCCCACATGGAACCAGGTAGTTGGGAAATACATGGGCACCAAGCCTGACCCCCC---------ATCAGACCTAGGTGGGAACTGCAGTGGTGACTTGCCCCCTCTGCCAGTCTGGCTGTACCA------CTACAGGAGGGAGGAACATCTAGCCCCACACGTGAGTGGAGACACCAGGTGTGGGCAGGTT-CCGGTGGTTGCTGCAGCTGAACCTTCCTAACCAGG s panTro5.chr3 2905 218 - 202621043 CCATGAAGCCCCCAGATGGAACCAGGTAATTGGGAAATACATGGGCACCAAGCCTGACCCCCC----------TCAGACCCAGGTGGGAACTGCAGTGGTGACTTGCCCCCTCTGCCAGTCTGGCTGTGCCA------CTACAGGAGGGAGGAACATCTAGCCCCACGCATGAGTGGAGACACCAGGTGTGGGCAGGTT-CCGGTGGTTGCTGCAGCTGAACCTTCCTAACCAGG i panTro5.chr3 C 0 C 0 s panPan2.chr12 80696314 213 - 135337776 --------GCCCCAGATGGAACCATGTAATTAGGAAATACATGGGTACCAAGCCTGACCCCCC-------CACTCAGACCCAGGTGGGAACTGCAGCCGTGACTTGCCGCCTCTGCCACTCTGGCTGTACCA------CTACAGGAGGGAGGAACATCTGACCCCACATGTGAGTGGAGACGCTAGGTGTGGGCAGGTT-CCAGTGGTTGCTGCAGCTGAACCTTCCCAAACAGA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 16744 227 + 508821 CCATGAAGCCCCCACATGGAACCAGGTAGTTGGGAAATACATGGGCACCAAGCCTGACCCCCCCCCCCCCCGCTCAGACCCAGGTGGGAACTGTAGCGGTG-CTTGCCCCCTCTGCCAGTCTGGCTGTACCA------CTACAGGAGGGAGGAACATCTAGCCCCACGCGTGAGTGGAGACACCAGGTGTGGGCAGGTT-CCGGTGGTTGCTGAAGCTGAACCTTCCTAACCAGG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44662917 219 + 86207423 CCATGAAGCCCCCACATGGAACCAGGTCATTGGGAAATACATGGGCACCAAGGCTGACCCCCA---------CTCAGACCCAGGTGGGAACTGCAGCAGTGACTTGTCCCCTCTGCCACTCTGGCTGTACCA------CTACAGGAGGGAGGAACATCTAGCTCCACATGTAAGTGGAGACACTAGGTGTGGGCAGGTT-CCAGCGGTTGCTGTAGCTGAACCTTCCCAACCAGG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 53825 219 - 204787373 CCATGAAGCCCCCAGATGGAACCAGGTAATTGGAAAACACATGGGCACTAAGCCTGACCCTCA---------CTCAGACCCACGTGGGAACTGCAGCAGTGACTTGCCCCCTCTGCCACTCTGGCTGTACCA------CTACAGGAGGGAGGAAGATCTAGCCCCATGCGTGAGTGGAGACACTAGGTGTAGGCAGGTT-CCAGTTGTTGCTGCAACTGAACCTTCCCAACCAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr6 4748 219 - 181584905 CCATGAAGCCCCCAGATGGAACCAGGTAGTTGGAAAACACATGGGCACCAAGCCTGACCGCCA---------CTCAGACCCACGTGGGAACTGCAGCAGTGACTTGCCCCCTCTGCCACTCTGGCTGCACCA------CTACAGGAGGGAGGAGCATCTAGCCCCACGCGTGAGTGGAGACACTAGGTGTGGGCAGGTT-CCAGTGGTTGCTACAGCTGAACCTTCCCAACCAGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 112121 219 - 5309094 CCATGAAGCCCCCAGATGGAACCAGGTAACTGGGAAGTACATGGGCACCAAGCCTGACCCCCA---------CTCAGAGCCAGGTGGGAACTGCAGCAGTGACTTGCCCCCTCCGCCACTCTGGCTGTACCC------CTACAGGAGGGAGGAACATCTAATCCCACGCGTGAGTGGAGACACTAGGTGTGGGCAGGTT-CCAGCGGTTGCTACAGCTGAATCTTCCCAACCAGG i macNem1.NW_012018355v1 C 0 I 1 s cerAty1.NW_012005170v1 0 219 + 97742 CCATGAAGCCCCCAGATGGAACCAGGTAATTGGGAAATACATGGGCACCCAGGCTGACCCCCA---------CTCAGACCCACGTGGGAACTGCAGCAGTGACTTGCCCCCTCTGCCACTCTGGCTGCACCA------CTACAGGAGGGAGGAGCATCTAGCTCCACGCATGAGTGGAGACACTAGGTGTGGGCAGGTT-CCAGTTGTTGCTGCAACTGAACCTTCCCAACCAGG i cerAty1.NW_012005170v1 N 0 C 0 s chlSab2.chr12 18127 206 + 108555830 TCATGA-------------AACAAGGTAATTGGGAAATACATGGGCACCCAGGCTGACCCCCA---------CTCAGACCCAGGTGGGAACTGCAGCAGTGAGTTGCCCCCTCTGCCACTCTGGCTGCACCA------CTACAGGAGGGAGGAACATCTAGCCCCATGCGTGAGTGGAGACACTAGGTGTAGGCAGGTT-CCAGTGGTTGCTGTAGCTGAACCTTCCCAACCAGG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 4067 219 + 85016 CCATGAAGCCCCCAGATGGAACCAGGTAGTTGGAAAACACATGGGCACCAAGCCTGACCCTCA---------CTCAGACCCAGGTGGGAACTGCAGCAGTGACTTGCCCCCTCTGCCACTCTGGCTGCACCA------CTACAGGAGGGGGGAGCATCTAGCCCCACGCGTGAGTGGAGACACTAGGTGTAGACAGGTT-CCAGTGGTTGCTGCAGCTGAACCTTCCCAACTATG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 20064 219 + 20575453 TCATGAAGCCCCCAGATGGAACCAGGTAATTGGGAAGTACATGTGCACCCAGGCTGACCCCCA---------CTCAGACCCACGTGGGAACTGCAGCAGTGACTTGCCCCCTCTGCCACTCTGGCTGTACCA------CTACGGGAGGGAGGAACATCTAGCCCCACACGTGAGTGGAGACACTAGATGTGGGCAGGTT-CCAGTGGTTGCTGCAGTTGAACTTTCCCAACCAGG i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 23104 226 - 117903854 CCATAAAACCCTCAGGTGGAACCAGGTAATTGGGAAATATGTGGGTACCAAGCCCGACCCCTA---------CTTAGACTCAGGTGAGAATTGCTGCAGTTACTTGCCCCCTCTGCCACTCTGGCTGTCCCACTACTGCTACAGGAGGAAGGCACATCTGAGCCCATGCTTGAGTAGAGACACTAGGTGTGAGCAGGTTCCCGGTGGTTGCTGCAGCTGAACCTTCCCAACTGGA i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107942v1 56748 213 - 883013 CCATAAAACC-----------CCAAGTAATTGGGAAATACTTGGGTACCAAGCCCAACCCCTA---------CTTAGATTCAGGTGAGAACTGCAGTAGTGACTTG-CCCCTCTGCTACTCCGGCTATACCACTACTGCTACAGGAGGAAGGTGCATCTGACCCCATGCTCGAGTGGAGACACTAGGTGTGAGCAGCTT-CCGGTGGTTGCTGCAGCTTAACCTTCCCAACTGGA i cebCap1.NW_016107942v1 C 0 C 0 a score=390768.000000 s hg38.chr3_KI270784v1_alt 113035 59 + 184404 TCCATGCAAGACCATCTCAGATGGGTGCGCACCTGGGTTGGGC----------AAGGACACCCCTCA--G--A s panTro5.chr3 3123 59 - 202621043 TCCATGCAAGACCATCTCAGATGGGTGCACACCTGGGTTGGGC----------AAGGACACCCCTTA--G--A i panTro5.chr3 C 0 C 0 s panPan2.chr12 80696527 59 - 135337776 TCCATGGGAAGCCATCTCAGATGGGTGCACACCTGGAGTTGGC----------AAGGACACCCCTCA--G--A i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 16971 59 + 508821 TCCATGCAAGACCATCTCAGATGGGTGCTCACCTGGGTTGGGC----------AAGGACACCCCTCA--G--A i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44663136 59 + 86207423 TCCATGCAAGCCCATCTCAGATGGGTGTGCACCTGGGTTTGGC----------AAGGACACCCCTCA--G--A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 54044 59 - 204787373 TCCATGCAAGGCCATCTCAGATGGGTGCACACCTGGGTTGGGC----------AAGGACACCCCTCA--GA-- i rheMac8.chr2 C 0 I 2 s macFas5.chr6 4967 58 - 181584905 TCCATGCAAGGCCGTCTCAGATGGGTGCGCACTTGGGCTGGGC----------AAGGACACCCCTCA--G--- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 112341 58 - 5309094 CCCACGCAAGGCCATCTCAGATGGATGCACACCTGGGTTGGGC----------AAGGACACCCCTCA--G--- i macNem1.NW_012018355v1 I 1 C 0 s cerAty1.NW_012005170v1 219 58 + 97742 TCCATGCAAGGCCATCTCAGATGGGTGCACACCTGGGTTAGGC----------AAGGACACCCCTCA--G--- i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 18333 59 + 108555830 TCCATGCAAGGCCATCTCAGATGGGTGCGCGCCTGGGTTGGGC----------AAGGACACCCCTGA--G-A- i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 4286 58 + 85016 TCCATGCAAGGCCGTCTCAGATGTGTGCGCACCTGGGCTGGGC----------AAGGACACCCCTCA--G--- i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 20283 58 + 20575453 TCCATGCAAGGCCATCTCAGATGGGTGCGCACCTGGGCTGGGC----------AAGGACACCCCTCA--G--- i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 23330 64 - 117903854 TCCATACAAGGTCATCTCAGGTGGGTGTGTGCCTGGGCTGGGCTG---TGG--AAGGACACCCCTCAAA---- i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 94205 66 + 3265726 TCCTTGCAAGGTCATCT---GAGGGTGTGCACCTGGGCTGGGCTGGGTTGGGCAAGGACATCCCTCAGA---- i saiBol1.JH378277 N 0 C 0 s cebCap1.NW_016107942v1 56961 62 - 883013 TCCATGCAAGGTCATCTCAAGTGGGTGTGCGCCTGGGCTGGGA-----TGGGCAAGGATACCCCTCA------ i cebCap1.NW_016107942v1 C 0 C 0 a score=20177.000000 s hg38.chr3_KI270784v1_alt 113094 24 + 184404 CAGTGAGAGCCACTGAGAGGGGCT s panTro5.chr3 3182 24 - 202621043 GAGTGAGAGCCACTGAGGAGGGCT i panTro5.chr3 C 0 C 0 s panPan2.chr12 80696586 24 - 135337776 GGGTGAGAGCCATTGAGGAGGGCT i panPan2.chr12 C 0 I 36 s gorGor5.CYUI01015884v1 17030 18 + 508821 CAGTGACAGCCACTGAGA------ i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44663195 8 + 86207423 CAGTGAGC---------------- i nomLeu3.chr21 C 0 C 0 s macFas5.chr6 5025 23 - 181584905 -AGTGAGAGCCACTGAGCAGGGCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 112399 23 - 5309094 -AGTGAGAGTCACTGAGGAGGACT i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012005170v1 277 16 + 97742 -AGTGAGAGCCACTGAG------- i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 18392 8 + 108555830 CAGTGAAA---------------- i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 4344 7 + 85016 -AGTGAGA---------------- i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 20341 23 + 20575453 -AGTGAGCGCCACTGAGCAGGGCT i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 23394 8 - 117903854 GGGTGAAA---------------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 94271 8 + 3265726 GAATGAGA---------------- i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 57023 6 - 883013 --GTGAAA---------------- i cebCap1.NW_016107942v1 C 0 C 0 e rheMac8.chr2 54103 2 - 204787373 I a score=19317.000000 s hg38.chr3_KI270784v1_alt 113118 5 + 184404 GCCAC s panTro5.chr3 3206 5 - 202621043 GTCAC i panTro5.chr3 C 0 I 548 s nomLeu3.chr21 44663203 5 + 86207423 GCCAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 54105 5 - 204787373 GCCAC i rheMac8.chr2 I 2 C 0 s chlSab2.chr12 18400 5 + 108555830 GTCAC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 4351 5 + 85016 GCCAC i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 20364 5 + 20575453 GTCAC i colAng1.NW_012114821v1 C 0 I 30 s calJac3.chr13 23402 5 - 117903854 GCCAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 94279 5 + 3265726 GCCAC i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 57029 5 - 883013 GCCAC i cebCap1.NW_016107942v1 C 0 C 0 e cerAty1.NW_012005170v1 293 0 + 97742 C e macNem1.NW_012018355v1 112422 0 - 5309094 C e macFas5.chr6 5048 0 - 181584905 C e panPan2.chr12 80696610 36 - 135337776 I e gorGor5.CYUI01015884v1 17048 0 + 508821 C a score=8304.000000 s hg38.chr3_KI270784v1_alt 113123 6 + 184404 TGAGAG s nomLeu3.chr21 44663208 6 + 86207423 TGAGGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 54110 6 - 204787373 TGAGCA i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012005170v1 293 2 + 97742 ----CA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 18405 6 + 108555830 TGAGCA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 4356 6 + 85016 TGAGCA i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr13 23407 6 - 117903854 TGAAGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 94284 6 + 3265726 GGAGGA i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 57034 6 - 883013 TGAGGA i cebCap1.NW_016107942v1 C 0 C 0 e colAng1.NW_012114821v1 20369 30 + 20575453 I e macNem1.NW_012018355v1 112422 0 - 5309094 C e macFas5.chr6 5048 0 - 181584905 C e panPan2.chr12 80696610 36 - 135337776 I e gorGor5.CYUI01015884v1 17048 0 + 508821 C e panTro5.chr3 3211 548 - 202621043 I a score=207532.000000 s hg38.chr3_KI270784v1_alt 113129 36 + 184404 GGGCTGTCACAAAGGCCCCTTTTCCTGCTCTTAGAA s panTro5.chr3 3759 36 - 202621043 GGGCTGTCACAGAGGCCCCTTTTCCTGCTCCTAGAA i panTro5.chr3 I 548 C 0 s gorGor5.CYUI01015884v1 17048 35 + 508821 GGGCTGTCACAGAGG-CCCTTTTCCTGCTCCTAGAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44663214 36 + 86207423 GGGCTGTCACAGAGGCCCCTTTTCCTGCTCCTAGAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 54116 36 - 204787373 GGGCTGTCACAGAGGCCCCTTTTCCTGCTCCAAGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr6 5048 31 - 181584905 -----GTCACAGAGGCCCCTTTTCCTGCTCCAAGAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 112422 31 - 5309094 -----GTCGCTGAGGCCCCTTTTCCTGCTCTGAGAA i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012005170v1 295 36 + 97742 GGGCTGTCACAGAGGCCCCTTTTCCTGCTCCAAGAG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 18411 36 + 108555830 GGGCTGTCACAGAGGCCCCTTTTCCTGCTCTGAGAA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 4362 36 + 85016 GGGCTGTCACAGAGGCCCCTTTTCCTGCTCCGAGAG i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr13 23413 36 - 117903854 GAGCTGTCAGAGAGGCCCCTTTTCCTGCTCCTGGAA i calJac3.chr13 C 0 I 110 s saiBol1.JH378277 94290 36 + 3265726 GCACTGTCAGAGAGGCCTTTTTTCTTGCTCCAAGAA i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 57040 36 - 883013 GGGCTGTCAGAGAGGCCCCTTTTCCTGCTCCAAGAA i cebCap1.NW_016107942v1 C 0 C 0 e colAng1.NW_012114821v1 20369 30 + 20575453 I e panPan2.chr12 80696610 36 - 135337776 I a score=-48541.000000 s hg38.chr3_KI270784v1_alt 113165 94 + 184404 CAGGTt--gggcgagtgtgggcgagtgtgggcgagtgtggg-gggtgtgggggggtgtaggggaggttgggggagtgtgggcgagtgtgggcgagtg s panTro5.chr3 3795 95 - 202621043 CAGGCt--gggcgagtatgggggagtgtgggcgagcgtgggcgagcgtgggcgagcgtgggggagcgtgggggagcttgggggagtgtgggggagta i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 17083 5 + 508821 CAGGT-------------------------------------------------------------------------------------------- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44663250 8 + 86207423 CAGGTT--GG--------------------------------------------------------------------------------------- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 54152 6 - 204787373 CAGGTT------------------------------------------------------------------------------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr6 5079 6 - 181584905 CAGGTT------------------------------------------------------------------------------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 112453 6 - 5309094 CAGGCT------------------------------------------------------------------------------------------- i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012005170v1 331 6 + 97742 CAGGTT------------------------------------------------------------------------------------------- i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 18447 8 + 108555830 CAGGTTGG----------------------------------------------------------------------------------------- i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 4398 6 + 85016 CAGGTT------------------------------------------------------------------------------------------- i manLeu1.NW_012101680v1 C 0 C 0 s saiBol1.JH378277 94326 5 + 3265726 CAGCT-------------------------------------------------------------------------------------------- i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 57076 5 - 883013 CAGGT-------------------------------------------------------------------------------------------- i cebCap1.NW_016107942v1 C 0 C 0 e calJac3.chr13 23449 110 - 117903854 I e colAng1.NW_012114821v1 20369 30 + 20575453 I e panPan2.chr12 80696610 36 - 135337776 I a score=204033.000000 s hg38.chr3_KI270784v1_alt 113259 34 + 184404 tgggcgagtgt-gggGAACCTCTCCCACCTCCCAG s panTro5.chr3 3890 35 - 202621043 tgggggagtgtgggggaACCTCTCCCACCTCCCAG i panTro5.chr3 C 0 C 0 s panPan2.chr12 80696646 34 - 135337776 TGGGGGAGTAT-GGTGGACCTCTCCCTCCTCCCAG i panPan2.chr12 I 36 C 0 s gorGor5.CYUI01015884v1 17088 34 + 508821 TGGGCGAGTAT-GGGGGACCTCTCCCACCTCCCAG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44663258 31 + 86207423 ---GGGAGTAT-GGGGGACCTCTTCCTCCTCCCAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 54158 33 - 204787373 -GGGGGAGTAT-GAGGGACCTCTGCCCCCTCCCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr6 5085 33 - 181584905 -GGGGGAGTAT-GGGGGACCTCTCGCCCCTCCCAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 112459 33 - 5309094 -GGGGGAGTGT-GGGGGACCTCTCCCACCTTCCAG i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012005170v1 337 33 + 97742 -GGGGGAGTAT-GAGGGACCTCTGCCCCCTCCCAG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 18455 33 + 108555830 -GGGGGAGTAT-GGGGGACCTCTCCCCGCTCCCAG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 4404 33 + 85016 -GGGGGAGTAT-GGGGGACCTCTCCCCTCTCCCAG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 20399 34 + 20575453 TGGGGGAGTAT-GGGGGACCTCTGCCCCCTCCCAG i colAng1.NW_012114821v1 I 30 C 0 s saiBol1.JH378277 94331 32 + 3265726 CGGGGGACTCT-GGGGGACCTCTCCCACCTCTG-- i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 57081 32 - 883013 TGGGGGAGTAT-GGGGGACCTCTGCCACTTCCC-- i cebCap1.NW_016107942v1 C 0 C 0 e calJac3.chr13 23449 110 - 117903854 I a score=50733.000000 s hg38.chr3_KI270784v1_alt 113293 6 + 184404 CTGCTT s panTro5.chr3 3925 6 - 202621043 CTGCTT i panTro5.chr3 C 0 C 0 s panPan2.chr12 80696680 6 - 135337776 CTGCTT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 17122 6 + 508821 CTGCTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44663289 6 + 86207423 CAGCTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 54191 6 - 204787373 CTGCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr6 5118 6 - 181584905 CTGCTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 112492 6 - 5309094 ATGCTT i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012005170v1 370 6 + 97742 CTGCTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 18488 6 + 108555830 CTGCTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 4437 6 + 85016 CTGCTT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 20433 6 + 20575453 CTGCTT i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 23559 6 - 117903854 CTGCTT i calJac3.chr13 I 110 C 0 s saiBol1.JH378277 94363 6 + 3265726 CTGCTT i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 57113 5 - 883013 -TACTT i cebCap1.NW_016107942v1 C 0 C 0 a score=1891544.000000 s hg38.chr3_KI270784v1_alt 113299 313 + 184404 CCAGGAGCCACTTCTTTTGAGATGAGACACTCTCCTGCCTGCCTGTTCCCATTTGGCTGCAATAGACCATTGACAACATTCAGAGA--ACAA----GAAGGGGCCTCACCTGTTTTCCCTGACACGTCGGAGGCAGGTGGGCATTCCCAGGGGACCTGGGGTAGAACCTGTTCATCTGCCCACCCCCAGGCTATGCTGGCTTCATCTTATCTGTGCGATAGGGCTGGGGGTGGGG------GT------GGGG--------------GTGG-GAATTACCAAGAGACCATCACACAGGCCGTGGAC-AAGTTCTACAAGAGCCAGGGAGAAGAACACTGTCCGTGCA s panPan2.chr12 80696686 298 - 135337776 CCAGGAGCCACTTCTTTCGAGATGAGGCACTCTCCTGCCAGCCTGTTCCCATTTGGCTGCAATAGGCCATTGCCAACATTCAGAGA--AAAG----AAAGGAGACTCACCTCTTCTCTCTGACACATCTTAGGCAGGTG--TATGTCCGGGGGTCCTGGGGTAGAACCTGTACATCTGCCCACCCCCAGGCTATGCTGGCTTCATCTTTTCTGTGTGAT------------GGGG------GT------GGGG---------------TGG-GAATTACCAAGAGGTCATCACACAGGCGGTGAAC-AAGTTCTACAAGAGCCAGGTAGAACAGCACTGTCCTGGCA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 17128 326 + 508821 CCAGGAGCCACTTCTTTCGAGATGAGACACT-TCCTGCCTGCCCGTTCCCATTTGGCTGCAATAGACCATTGACAACATTCAGAGA--ACAA----GAAGGGGCCTCACCTGTTTTCCCTGACACGTCGGAGGCAGGTGGGCATTCCCAGGGGACGTGGAGTAGAACCTGTACATCTGCCCACACCCAGGCAATGCTGGCTTCATCTTATCTGTGCGATAGGGCTGggggtgggg------gt------gggggggggtggggtggggtgg-gAATTACCAAGAGACCATCACACAGGCCATGGAC-AAGTTCTACAAGAGCCAGGGAGAAGAACACTGTCCGTGCA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44663295 299 + 86207423 CCAGGAGCCACTTCTTTCGAGATGAGACACTCTCCTGCCTGCCTGTTCCCATTTGGCTGCAATAGACCATTGCCAACATTTAGAGA--ACAA----AAAGGGGCCTCACCTATTTTCCCTGACACGTTGGAGGCAGGTGGGCATGCCCAGGGGACCTGGGGTAGATCCTGTACATCTGCCCATCCCCAGGCTATGCTGGCTTCATCTTATCTGTG----------------GGGT------GT------GGGG------------GGGTGG-GAATTACCAAGAGACCATCACACAGGCCATGGAC-AAGTTCTACAAGAGCCAGGGAGAAGAGCGCTGTCCGTGCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 54197 300 - 204787373 CCAGGAGCCACTTCTTTCTAGATGAGGCACTCTCCTGCCTGCCCGTTCCCATTTGGCTGCAATAGACCATTGCCAACATTCAGAGA--ACAA----AAAGGGGCCTCACCTGT-TTCCCTGACATGTCGGAGGCAGGTGGGTATGCCCAGGGGATCTGGGGTAGAACCTGTACATCTGCCCACCCCCAGGCCATGCTGGCTTCATCTTATCTGTGTGAT------------GGCG------GT------GGGG--------------GTGG-GAATTACCAAGAGACCATCACACAGGCCGTGGAC-AAGTTCTACAAAAGCCAGGTAGAGGAGCACCGTCCGTGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr6 5124 285 - 181584905 CCAGGAGCCACTTCTTTCGAGATGAGGCACTCTCCTGCCTGCCCGTTCCCATTTGGCTGCAATAGACCATTGCCAACATACGGAGA--ACAA----AAAGGGGCCTCACCTGT-TTCCCCGACACGTCGGAGGCAGGTGGGTATGCCC--------------AGAACCTATACATCGGCCCA-CCCCAGGCTATGCTGACTTCATCTCATCTGTGTGAT------------GGGG------GT------AGGG--------------GTGG-GAATTACCAAGAGACCATCACACAGGCCATGGAC-AAGTTCTACAAGAGCCAGGTAGAAGAGCACCGTCCATGCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 112498 301 - 5309094 CCAGGAGCCACTTCCTTTGAGATGAGGCACTCTCCTGCCTGCCTGTTCCCATTTGGATGTAATAGGCCATTGCCAACATTCAGAGA--ACAAAAAGAAAGGGGCCTCGCCTGTCTTCCCTGACACATCTGAGGCAGGTGGGTATGCCCAAG-----TGGGCTAGAACCTGTACATCTGCCCACCCCCAGGCTATGCTGGCTTCATCTTATCTGTGTGAT------------GGGG------GTG-----GGGG--------------GTGG-GAATTACCAAGAGGTCATCACACAGGGCATGGAC-AAGTTCTACAAGAGCCAGGTTGAAGAGCACTGGCCTGGCA i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012005170v1 376 306 + 97742 CCAGGAGCCACTTCTTTCGAGATGAGGCACTCTCCTGCCTGCCCGTTCCCATTTGGCTGCAATAGACCATTGCCAACATACGGAGA--ACAA----AAAGGGGCCTCACCTGT-TTCCCTGACATGTCGGAGGCAGGTGGGTATGCCCAGGGGATCTGGGGTAGAACCTGTACATGGGCCCACTCCCAGGCCATGCTGGCTTCATCTTATCTGTGTGAT------------GGGG------GTGGGGATGGGG--------------GTGG-GAATTACCAAGAGACCATCACACAGGCCGTGGAC-AAGTTCTACAAAAGCCAGGTAGAGGAGCACCATCCGTGCA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 18494 300 + 108555830 CCAGGAGGCACTTCTTTCAAGATGAGGCACTCTCCTGCCTGCCTGTTCCCATTTGGCTGCAATAGACCATTGCCAACATTCAGAGA--ACAA----AAAGGGGCCTCACCTGT-TTCCCCGACACGTCAGAGGCAGGTGGGTATGCCCAGGGGACCTGGGGTAGAACCTATACATCGGCCCACCCCCAGGCTATGCTGGCTTCATCTTATCTGTGTGAT------------GGGG------GT------GGGG--------------GTGG-GAATTACCAAGAGACCATCACACAGGCCGTGGAC-AAGTTCTACAAGAGCCAGATAGAAGAGCACCATCCGTGCA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 4443 307 + 85016 CCAGGAGCCACTTCTTTCGAGATGAGGCACTCTCCTGCCTGCCCGTTCCCATTTGGCTGCAATAGACCATTGCCAACATTCAGAGA--ACAA----AAAGGGGCCTCACCTGT-TTCCCCGACACGTCGAAGGCAGGTGGGTATGCCCAGGGGACCTGGGGTAGAACCTATACATCGGCCCACCCCCAGGCTATGCTGACTTCATCTCATCTGTGTGAT------------GGGGGTGGGAGT------GGGG--------------GTGG-GAATTACCAAGAGACCATCACACAGGCCATGGACAAAGTTCTACAAGAGCCAGGTAGAGGAGCACCGTCCGTACA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 20439 296 + 20575453 CCAGGAGCCACTTCTTTCCAGATGAGGCACTCTCCTGCCTGCCCATTCCCATTTGGCTGCAATAGACCATTGCCAACATTCAGAGA--ACAT----AAATGGGCCTCACCTGT-TTCCCCGACATGTCGGAGGCAGGTGGGTATGTCCAGGGGACCTGGGGTAGAACCTATACCTCGGCCCACCCCCAGGCTATGCTGGCTTCATCT--TTTGTGTGAT------------GGGG--------------TGGA--------------GTGG-GAATTACCAAGAGACCATCACACAGGCCATGGAC-AAGTTCTACAAGAGCCAGGTAGAAGAGCACCATCCATGCA i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 23565 303 - 117903854 CCAGGAGAAACTTCTTTCAAGATGAAGTACTATCCT-TTTGCCTGGCCTCATTTGCCCCCAAGAGCCCATTGTCAACATTCAGACAATAAAA----AGAGGAGCCTCACCTGTTTTCCCTGACACATCTGAGGCAGGTGGGTATGCCCAGGGGACCTGGGGTAAAACCCATACATCTACCCACCCCCAGGCTAGACTGGCTTCGTCTTGTCTGTTTGAT------------GTGG------CA------GGTG--------------GCAGAGAATTACCAAGAGGTCATCACACAGACCATGGAC-AAGTTCTAAAAGAGCCAGGTAGAAGGGCACTGTCCTGGCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 94369 297 + 3265726 CCAGGAGCCACTTCTTTCAAAATGAGGTACTATCCTCCTTGCCAGTTCTCGTTTGACCCCAATGGCCCATTGTCAACACTCAGAA---ACAG----AGAGGAGCATCACCTGTTTTCCTTGACACATCTGAGGCCAGTGGGTATGCCCAGGGGAACTGGGGTGGAACGTGTATATCTGCCCACCTCCAGGCTATGCTTGCTTTATCTTGTCTGTGTGAC------------ATGG------GA------GAGG--------------G----GAATTACCAAGAGGTCATCACATAGGCCATGGAC-AAGTTCTACAAGAGCCAGGTAGAAGAGCATTGTCCTGGCA i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 57118 300 - 883013 CCAGGAGCCACTTCTTTCATGATGAGGTACTATCCTCTTTGCCTGGTGTCATTTGCCCCCAATAACCCATTGCCAACATTCAGACAATAAAA----AGAGGAGCCTCACCTGTTTTCCCTGACACATCTGAGGCAGGTGGGTATGCCCAGGGGACCTGGGGTGGAACCCATACATCTACCCACCCCCAGGCTAGACTGGCTTCGTCTTGTC----CAAT------------ATGG------GG------GTTG--------------GGGGAGAATTACCAGGAGGTCATCACACAGGCCATGGAC-AAGTTCTACAAGAGCCAGGTAGAAGAGCACTGTCCTGGCA i cebCap1.NW_016107942v1 C 0 C 0 e panTro5.chr3 3931 0 - 202621043 C a score=1455639.000000 s hg38.chr3_KI270784v1_alt 113612 192 + 184404 TGCTGCCCAGCGCCCAGCTCACACAC--ACAGCTCTCATTTGACAGCTTCCCCAAAGCAGGCTTTTG-CAGTCCAGGCTCCCCAAGAAGCCTGGGGAGGAGACTCTG-------------CCAGGCTGAAGGGCCTGTCCCCAAAGGTGCCACCCTCACCAGGCTCATCCTGGCAATCTTGGATTATTTTTGCCCTGAGGTTTTGGAG s panTro5.chr3 3931 192 - 202621043 TGCTGCCCAGCACCCAGCTCACACAC--ACAGCTCTCATTTGACAGCTTCCCCAAAGCAGGCTTTTG-CAGTCCAGGCTCCCCAAGAAGCCTGGGGAGGAGACTCTG-------------CCAGGCTGAAGGGCCTGTCCCCAAAGTTGCCACCCTCACCAGGCTCATCCTGACAATCTTGGATTATTTTTGCCCTGAAGTTTTGGAG i panTro5.chr3 C 0 C 0 s panPan2.chr12 80696984 185 - 135337776 TGCTGCCCAGCACCCAGCTCACACAC--ACATCTCTTATTTGA-AGCTTTCCCAAAGCAGGC-TTTG-AAGTCCAGGCTCCCTGAGAAGCCTGGGGAGGAGACTCTG-------------CCAGGCTAAAGGGCCTATCCCCAAAGGTGCCAGCCTCACCAGTCTCATCCTGACAATC-----TTATCTTTGCCCTGAAGTTTTGGAG i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 17454 190 + 508821 TGCTGCCCAGCACCCAGCTCACACAC--ACAGCTCTCATTTGACAGCTTCCCCAAAGCAGGC-TTTG-CAGTCCAGGCTCCCCAAGAAGCCTGGGGAGGAGACTTTG-------------CCAGGCTGAAGGGCCTGTCCCCAAAGGTGCCACCCTCACCAGGCTCATCCTG-CAATCTTGGATTATTTTTGCCCTGAAGTTTTGGAG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44663594 188 + 86207423 CGCTGCCCGGCACCCAGCTCACACAC--ACATCTCTCATTT----GCTTTCCCAAAGCAGATTTTTG-CCGTCCAGGCTCCCCAAGCAGCCTGGGGAGGAGACTCTG-------------CCAGGCTGAAGGGCCTGTCCCCAAACGTGCCACCCTCACCGGGCTCATCCTGACTATCTTGGATTATTTTTGCCCTGAAGTTTTGGAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 54497 187 - 204787373 TGCTGCCCGGCACCCAGCTCACACAC--ACA--TCTTATTTGACAGCTTCCCCAAAGCAGGA-TTTG-AAGTCCAGGCTCCCAGAGAAGCCTGGGGAGGAGA--CTG-------------CCAGGCTAAAGGGCCTATCCTCAAAGGTGCCACCCTCACCAGTCTCATCCTGACGAACTTGGGTTATTTTTGCCCTGAAGTTTTGGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr6 5409 189 - 181584905 TGCTGCCCAGCACCCAGCTCACACAC--ACA--TCTTATTTGACAGCTTCCCCAAAGCAGGC-TTTG-AAGTCCAGGCTCCCCGAGAAGCCTGGGGAGGAGACTCTG-------------CCAGGCTAAAGGGCCTATTCCCAAAGGTGCCACCCTCACCAGTCTCATCCTGACAATCTTGGGTTATTTTTGCCCTGAAGTTTTGGAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 112799 176 - 5309094 TGCTGCCCAGCACCCAGCTCACACACCTATC--TCTTATTTGACAGCTTCCCCAAAGCAGGC-TTTG-AAGTCCGAGCTCCCCAAGAAGCCTGGGGAGGAGACTCTG-------------CCCGGCTAAAGGACCTAT---------------CACCACAAGTCTCATCCTGATGATCTTGGATTATTGTTGCCCTGAAGTTCTGGAG i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012005170v1 682 188 + 97742 TGCTGCCCGGCACCCAGCTCACACAC--ACA--TCTTATTTGACAGCTTCCCCAAAGCAGGA-TTTG-AAGTCCAGGCTCCCAGAGAAGCCTGGGGAGGAGACTCTG--------------CAGGCTAAAGGGCCTATCCGCAAAGGTGCCACCCTCACCAGTCTCATTCTGACAATCTTGGGTTATTTTTGCCCTGAAGTTTTGGAG i cerAty1.NW_012005170v1 C 0 I 6710 s chlSab2.chr12 18794 191 + 108555830 TGCTGCCCGGCACCCAGCTCACACAC--ACCTCTCTTACATGACAGCTTCCCCAAAGCAGGC-TTTG-AAGTCCGGGCTCCCTGAGAAGCCTGGGGAGGAGACTCTG-------------CCAGGCTAAAGGGCCTATTCCCAAAGGTGCCACCCTCACCAGTCTCATCCTGACAATCTTGGGTTATTTTTGCCCTGAAGTTTTGGAG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 4750 191 + 85016 TGCTGCCTGGCACCCAGATCACACAC--ACATCTCTTATTTGACAGCTTCTCCAAAGCAGGC-TTTG-AAGTCCGGGCTCCCTGAGAAGCCTGGGGAGGAGACTCTG-------------CCAGGCTAAAGGGCCTATCCGCAAAGGTGCCACCCTCACCAGTCCCATCCTGACAATCTTGGGTTATTTTTGCCCTGAAGTTTTGGAG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 20735 191 + 20575453 TGCTGCCCGGCACCCATCTCACACAC--ACATCTCTTATTTGACAGCTTCCCCAAAGCAGGC-TTTG-AAGTCCAGGCTCCCAGAGAAGCCTGGGGAGGAGACTCTG-------------CCAGGCTAAAGGGCCTATCCCCAAAGGTGCCACCCACACCAATCTCATCCTGACAATCTTGGATTATTTTTGCCCTGAAGTTTTGGAG i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 23868 188 - 117903854 TGCTGCCCGGCACCCCACTCACACAC--AC----CTCATTTGACAGCTTCCTCGAAGCAGAC-CTTGAAAGTCCAGGCTCCCTGAGAAGCCTGGGGAGGAGACTCTG-------------CCGGGCTAAAGAACCTACCCCCAAAGGTGCCACCCTCACCAGTGTCATCCTGACAATCTTGGATTATTATTGCCCTGAAGTTTTGGAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 94666 204 + 3265726 TGCTACCCAGCACCCAGCTCACACAT--ACATCTCTTATTTGACAGCTTCCCTGAAGCAGGC-CTTG-AAGTCCAGGCTCCCTGACAAGCCCCAGGAGGAGACTCTGCTGGGCTAGGGTCCCGGGCCAAAGAACTCATCCCCAAGGATGCCACCCTCACCAGTCTCATCCTGACAATCTTGGATTATTTTTGCCCTGAAGTTTTTGAG i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 57418 186 - 883013 TGCTGCCCAGCACCCAGCTCATGCAC--ACAT--CTCATTTGACACCTTCCTCGAAGCAGGT-CTTG-AAGTCCAGGCT-CCTGTGAAGCCTGGAAAAGAGA--TTG-------------CTGAGCTAAAGAACCTATCCCCAAAGGTGCCACCCTCACCAGTCTCATCCTGACAATCTTGGATTATTATTGCCCTGAAGTTTTAGAG i cebCap1.NW_016107942v1 C 0 C 0 a score=1221348.000000 s hg38.chr3_KI270784v1_alt 113804 275 + 184404 TGGG----AGACAGGGAGAGAGCAGA------CAGTACGCA-TTAGCCACCTTTCCAGAGAGCATCAGCCCTCCAGACTGGGGCAGGTCAGACCTCCACTCAGGCG---TTTTTCTCACTGGTTGCCAGTTGGGGGAAGCAGCATTTGTGAGCACCTGCCTGTCTCCCCAGGTCCTGTTCAGAAACCCCATCTGTGCCTTTGGA--GGGACTGCCCTGAGCACAGAGGCCCAGCAACCGC--------------------------------------------------------------------------------ATCTACGGCCCCCAGGACCTAATCCCCTTCTACAT-CAGGTTCAGTGCATGT s panTro5.chr3 4123 347 - 202621043 TGGG----GGACAGGGAGAGAGCAGA------CAGTACGCA-TTAGCCACCTTTCCAAAGAGCATCAGCCCTCCAGACTGGGGCAGGTCAGACCTCCACTCAGGCG---TTTTTCTCACTGGTTGCCAGTTGAGGGAAGCAGCATTTGTGAGCACCTGCCTGTCTCCCCAGGTCCTGTTCAGAAACCCCATCTGTGCCTTTGGA--GGGACTGCCCTGAGCACACAGGCCCAGCAACTGCCATCTACGACCCCCAGGACCTAATCCCCT--------TGTACATAGGGGTTCAGTGCATGTCACAGGCCCAGCAATCA-CATCTACAGCCCCCAGGACCTAATCCCCTTCTACATAGGGGTTCAGTGCATGT i panTro5.chr3 C 0 C 0 s panPan2.chr12 80697169 224 - 135337776 TGGG----GGATAGGGAGAGAGCAGA------CACTGTACATTTAGCCACCTTTCCAGAGAGCATCAGCCATCCAGACTGGGGCAGGTCAGACCTCCACTCAGACG---TTTTTCTCACTGGTTGCCAGTTG-GGGAAGCAGCACTTGTGAGCACCTGCCTGTCTCCTCAGATCCTGTTCAGAAACCCCATCTGTGCCTTTGGA--GAGACTGCCCCGAGCACACAGGCCCAGCAACTGC------------------------------------------------------------------------------------------------------------------------------------ i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 17644 341 + 508821 TGGG----GGACAGGGAGAGAGCAGA------CAGTACGCA-TTAGCCACCTTTCCAGAGAGCATCAGCCCTCCAGACTGGGGCAGGTCAGACCTCCACTCAGGCG---TTTTTCTCACTGGTTGCCAGTTGGGGGAAGCAGCATTTGTGAGCACCTGCCTGTCTCCCCAGGTCCTGTTCAGAAACCCCATCTGTGCCTTTGGA--G-GACTGCCCTGAGCACACAGGCCCAGCAACTGCCATCTACCACCCCAGGACCTAACCCTTCTACATAGGGT------------TCAGTGCATGTCACTGGCCCAGCAACCACCATCTACGG-CCCCAGGACGTAATCCCCTTCTACAT-AGGGTTCAGTGCATGT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44663782 218 + 86207423 TGGC----AGACAGGGAGACAGCAGA------CAGTACACA-TTAGCCACCTTTCCAGAGAGCATCAGTCCTCCAGACTGGGGCAGGTCAGACCTCCACTCAGGCG---TTTTTCTCACTGGTTCCCAGTTGGGGGAAACAGCATTTGTGAGCACCAGCCTGTCTCCCCAGGTCCTGTTCAGAAACCCCATCTGTGCCTTTCGA--GAGACTGCCCTGAGCACACAGGCCCAAC------------------------------------------------------------------------------------------------------------------------------------------ i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 54684 221 - 204787373 TGGG----GGACAGGGAGACA-CAGA------CAGTACGCA-TTAGCCACCTTTCCAGAGAGCACCAGCCCTCCAGACT-GGGCAGGTCCGACCTCCACTCGGGCG---TTTTTCTCACTGGCTGCCAGTTGGGGGAGGCAGCA-TTGTGAGCACCTGCCTGTCTCCCCAGGTCCTGTTCAGAAACCCCATCTGTGCCTCTGGA--GAGACTGCCCTGAGCACACAGGCCCAGCAACCGC------------------------------------------------------------------------------------------------------------------------------------ i rheMac8.chr2 C 0 C 0 s macFas5.chr6 5598 221 - 181584905 AGGG----GGACAGGGAGACA-CAGA------CAGTACGCA-TTAGCCACCTTTCCAGAGAGCATCAGACCTCCAGACT-GGGCAGGTCAGACCTCCACTCGGGCG---TTTCTCTCACTGGCTGCCAGTTGGGGGAAGCAGCA-TTGTGAGCACCTGCCCATCTCCCCAGGTCCTGTTCAGAAACCCCATCTGTGCCTCTGGA--GAGGCTGCCCTGAGCACACAGGCCCAGCAACCAC------------------------------------------------------------------------------------------------------------------------------------ i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 112975 222 - 5309094 TGGG----GGACAGAGGCA-G-CAGA------CGGTGCGCA-TTAGCCACCTTTCCAGAGGACATCAGCCCTCCAGACTGGGGCGGGTCAGACCTCCACTCTGGTG---TTTTTCTCACTGATTGCCAGTTAGGGGAAGCGGCACTTGTGAGCACCTGCCTCTCTCCCCAGGTCCTGTTCAGAAACCCCATCTGTGCCTTTGGA--GAGACTGCCCCGAGCACACAGGCCCAGCAACCAC------------------------------------------------------------------------------------------------------------------------------------ i macNem1.NW_012018355v1 C 0 C 0 s chlSab2.chr12 18985 223 + 108555830 AGGG----GAAGAGGGAGACAGCAGA------CAGTACGAA-TTAGCCACTTTTCCAGAGAGCATCAGCCCTCCAGACTGGGGCAGGTCAGACCTCCACTCGGGCG---TTTTTCCCACTGGCTGCCAGTTGGGGGAAGCAGCA-TTGTGAGCACCTGCTCATCTCCCCAGGTCCTGCTCAGAAACCCCATCTGTGCCTCTGAA--GAGACTGCCCCGAGCACACAGGCTGAGCAACCAC------------------------------------------------------------------------------------------------------------------------------------ i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 4941 227 + 85016 AGGG----GGACAGGGAGACA-CAGACAGTACCAGTACGCA-TTAGCCACCTTTCCAGAGAGCACCAGGCCTCCAGACT-GGGCAGGTCTGACCTCCACTCGGGCG---TTTCTCTCACTGGTTGCCAGTTGGGGGAGGCAGCA-TTGTGAGCACCTGCCCGTCTCCCCAGGTCCTGTTCAGAAACCCCATCTGTGCCTCTGGA--GAGACTGCCCCGAGCACACAGGCCCAGCAACTGC------------------------------------------------------------------------------------------------------------------------------------ i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 20926 275 + 20575453 AGGA----GGACAGGGAGACAGCAGA------CAGTACGCA-TTAGCCACCTTTCCAGAGAGCATCAGCCCTACAGACTGGGGCAGGTCAGACCTTCACTCCGGCG---TTTTTCTCACGGGCTGCCAGTTGGGGGAAGCAGCA-TTGTGAGCAGCTGCCCGTCTCCCCAGGTCCTGTTCAGAAACCCCACCTGTGCCTCTGGA--GAGACTGCCCCGAGCACACAGGCCCAGCAGCCGC-------------------------------------------------------------------------------CATCTATGGCCCCCAGGACCTAATCCCCTTCTGCAC-AAGGGTCAGTGCATGT i colAng1.NW_012114821v1 C 0 I 6 s calJac3.chr13 24056 210 - 117903854 TGGG----GGACAG----ACAGGAG--------AGTGCCCA-TTAGCCACCTTTCCAGAGAACATCAGCCCTCCAGACTGGGGCGGCTCAGACCTCCATGCAGGCACTTTTTTCCTCACTGGTTGCCAG-TGGGGAAAACAGCACTTGTGAGCACCTGCCTGTCTTCCCAGGCCCTGTTCAGAAACCCCATCTGCACCTTTGGAGAGAGACTACCCCAAGCACGCAGG------------------------------------------------------------------------------------------------------------------------------------------------ i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 94870 210 + 3265726 TGGGAGTCAGGCAG----ACAGGAGA------CAGTGCCCA-TTAGCCAACTTTCCAGAGAACATCAGCCCTCCAGTCTAGGGCAGGT-AGACCTGCACTAGGTCA------TTCTCACTGGTTGCCAGCTGAGGGAAACAGCACTTGTGGGCACCTGCTTGTCTCCCCAGGTCTCGTTCAGAAACCCTGTCTGTGCCTTTGGATCGAGACTACACCAAGCACACAGG------------------------------------------------------------------------------------------------------------------------------------------------ i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 57604 196 - 883013 TGGG----GGACAG--------------------------A-TTAGCCACCTTTCCAGAGAACATCAGACCTCCAGACTGGGGCAGGTCAGACCTCCATGCAGGCATTTTTTTCCTCCCTGGTTGCCAG-TGGGGAAATCAGCACGTGTGAGCACCTACCCATCTTCCCATGACCTGCTCAGAAACCCAACCTGTGCCTTTGGAGAGAGACTATCCCAAGCACACAGG------------------------------------------------------------------------------------------------------------------------------------------------ i cebCap1.NW_016107942v1 C 0 C 0 e cerAty1.NW_012005170v1 870 6710 + 97742 I a score=264333.000000 s hg38.chr3_KI270784v1_alt 114079 75 + 184404 CACAGGCCCAGCAACCA-CATCTACGGCCCCCAGGACCTAATCCCCTTCTACTTGGGGTTCAGTGCATGTTAGCAG s panTro5.chr3 4470 75 - 202621043 CACAGGCCCAGCAACCA-CATCTGCAGCCCCCAGGACCTAATCCCCTTCTACATAGGGTTCAGTGCATGTTAGCAG i panTro5.chr3 C 0 C 0 s panPan2.chr12 80697393 43 - 135337776 ------------------CATCTATGGCCCCCAGGACCTAATCCCCTTCTACATAGGGTTC--------------- i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 17985 75 + 508821 CACTGGCCCAGCAACCACCATCTACGG-CCCCAGGACGTAATCCCCTTCTACATAGGGTTCAGTGCATGTTAGCAG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44664000 48 + 86207423 ----------------------------CCCCAGGACCTAATCCCCTTCTACACAGGGTTCAGTGCATGTGAGCAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 54905 58 - 204787373 ------------------CATCTATGGCCCCCAGGACCTAATCCCCTTCTGCATAGGGGTCAGTGCATGTGAGTAT i rheMac8.chr2 C 0 C 0 s macFas5.chr6 5819 58 - 181584905 ------------------CCTCTATGGCCCCCAGGACCTAATCCCCTTCTGCATAGGGGTCAGTGCATGTGAGTAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 113197 58 - 5309094 ------------------CATCTACGGCCCCCAGGACCTAATCCCCTTCTACATAAGGTTCAGTGCATGTGAGCAT i macNem1.NW_012018355v1 C 0 C 0 s chlSab2.chr12 19208 58 + 108555830 ------------------CATCTATGGCCCCCAGGACCTAATCCCCTTCTACATAGGGTTCGGTGCATGTGAGTAT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 5168 58 + 85016 ------------------CATCTGTGGCCCCCAGGACCTAATCCCCTTCTGCATAGGGGTCAGTGCATGTGAGTAT i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr13 24266 68 - 117903854 -------CCAGCAACTG-CATCTATGGCCTTCAGGACCTGCTCTACTTCCATAGGGGGTTCACTGCATGTGAGTAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 95080 68 + 3265726 -------CCAGCAGGCT-TATCTATGGCCTTCACAACCGAATCCCCTTATTTATGGGGTTCACTGCATGTGAGTAT i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 57800 68 - 883013 -------CCAGCAACTG-CACCTATGGCTTTCAGGACCTAATCCCCTTCCATATGGGGTTCACTGCATGTGAGTAT i cebCap1.NW_016107942v1 C 0 C 0 e cerAty1.NW_012005170v1 870 6710 + 97742 I e colAng1.NW_012114821v1 21201 6 + 20575453 I a score=4816292.000000 s hg38.chr3_KI270784v1_alt 114154 785 + 184404 ACACTGGGCTTGATCCCTGC---CTAGTCCCTGCCAGATATCCCATGCCCACCTCGTGAAGAGAATGAGGCCACACAATCACACCCAGGCCATCGTGGTGATGGAGTCGCTGGGGTCCCACTTGCCCACCCTTCATTGCTGGTTCAGAGCCAGCTGTCTGACCACATTCCTACCCCGAGATGGGACTCTGGGGACATTGTCCAGCAGGGTTCACTGACCCCTTTTAAAGTTCCAGAAAC--ATGGCCAGCTGGTCCCCTAGAAGTTTGGCACATGGGATAAGCCAAGGCTTGCCTTCAGGAACAGG-TTTTCCACCACGTCGCTGCCCAAGGCCCAGGGCATCCCCAAGTTCATGTGAAGCCTGCCTGCCATGTCCACAGCCCATGCCGAGCC-----------------CTCCTGGAGCCACTGGAATGCTTGTTCCTGGGCATGTGATAAGCCC-AGACAGCTTCTGCCTTGCAGGACAACTATGCGCATCTGGCAGCAGTAGCCAGAGG---GCCCATAGAAAGAAGATGGAGGTGAAACCAGATGCTGTGAAAATGCTTTATTAGGCAAAACCGCATACTATAAAAATGCTTT--AAAACGCAGC---AGGAGATGTGAAGAC--ACAAATGAACAAGCGCA---TAGTGACACATGGCTGTCAGAACACAGTGAAGAACCCACACTGCCT-CCCCCCTTTACCTAGAAAAGGAGAGTTCTAGG--------ccacctcctcctcggcatactcctcatc---ctcctcctcctcAGCCGTGGCATCCTGATATTGCTGATATTCAGACACCAGGTCGTTCATGTTGCTC s panTro5.chr3 4545 781 - 202621043 ACACTGGGCTCGATTCCTGC---CTAGTCCCTGCCAGATACCCCATGCCCACCTCGTTAAGAGAATGAGGCCACACAAACACACCCAGGCCATCGTGATGATGGAGTGGCTGGGGTCCCACTTGCCCACCCTTCATTGCTGGTTCAGAGCCAGCTGTCTGACCACATTCCTACCCCGAGATGGGACTTTGGGGACATTGTCCACCAGGGTTCACTGACCCCTTTTAAAGTTCCAGAAAC--ATGGCCAGCTGGTCCCCTAGAAGTTTGGTACATGGGATAAGCCAAGGCTTGCCTTCAGGAACAGG-TTTTCCACCACGTCGCTGCCCAAGGCCCAGGGCATCCCCAAGTTCGCGTGAAGCCTGCCTGCCATGTCCACAGCCCATGCCGAGCC-----------------CTCCTGGAGCCACTGGAATGCTTGTTCCTGGGCATGTGATGAACCC-AGACAGCTTCCACCTTGCAGGACAACTGTGCGCATCTGGCAGCAGTAGCTGGAGG---GCCCATGGAA----GATGGAGGTGAAACCAGATGCTGTGAGAATACTTTATTAGGCAAAACCGCATACTATACAAATGCTTT--AAAATGCAGC---AGGAGATGTGAAGAC--ACAAATGAACAAGTGCA---TAGTGACACATGGCTGTCAGAACACCGTAAAGAATCCACACTGCTT-CCCCCCTTTACCTAGAAAAGGAGAGTTCTAGG--------ccacctcctcctcggcacactcctcatc---ctcctcctcctccgccGTGGCATCCTGATATTGCTGATATTCAGACACCAGGTCGTTCATGTTGCTC i panTro5.chr3 C 0 C 0 s panPan2.chr12 80697436 778 - 135337776 -----------GATTCCTACCCACTAGTCCCTGCCAGATATCCCATGCCTATCTCATTAAGAGAATGAGGCCATACAAACACACCCAGGCCTTCATGGTGATGGAGTGGCTGGGGTCCTACTTGCCCACCCCTCATTGCTGGTTCAGAACCAGCTGTCTGACCACATCCCTACCCTGAGGTGGGACTTTGGGGACATTGTCCACCAGGG-TCACTGACCACTTTTAAAGTTCCAGAAACAGAGGGCAAGCTGTTCCCCTGGAAGTTTGGTACATGGGATAAGCCAAGGCTTGCCTTCAGGAACAGG-TTTTCTGCCACATAGCTGCCCAAGACCTAGGGCATCCCCAAGTTCGTGTGAAGCCTGCCTGCCATGTCCACAGCCCATGCTGACCC-----------------CTCCTGGAGCCACTGGAATGCTTGTTCCTGGGCATGTTATAAGCCC-AGACAGCTTCAGCCTTGCAGGACAACTATGCACATCTGGCAGCAGTAGCCACAGG---GCCTATAGAAAGAAGTTGGAGGTGAAACCAGATGCTATGAGAATACTTTATTAGGCAAAACCGCATACTATAAAAGTGCTTC--AAAATGCAGCAGGAGGAGATGTGAAGAC--AAAAATGAACAAGTGCA---TAGTGACATATGGCTGTCAGGACACGGTAAAGAATCCACACTGCTT-CCCCCCTTTACCCAGGAAAGGAAAGTTCTAGG--------CCACCTCCTCCTCAGCATACTCCTCA------AACTTCTCGTTAGCTGTGGCATCCTGATATTGCTGATATTCCGACACAAGGTCGTTCACATTGCTC i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01015884v1 18060 781 + 508821 ACACTGGGCTTGACTCCTGC---CTAGTCCCTGCCAGATATCCCATACCCACCTCATTAAGAGAATGAGGCCACACAAACACACCCAGGCCATCGTGGTGATGGAGTGGCTGGGGACCCACTTGCCCACCCTTCATTGCTGGTTCAGAGCCAGCCGTCTGACCACATTCCTACCC-GAGATGGGACTTTGGGGACACTGTCCACCAGGGTTCA-TGACCCCTTTTAAAGTTCCAGAAAC--ATGGCCAGCTGGTCCCCTAGAAGTTTGGTACTTGGGATAAGCTAAGGCTTGCCTTCAGGAACAGG-TTTTCCACCATGTCGCTGCCCAAGGCCCAGGGCATCCCCAAGTTCATGTGAAGCCTGCCTGCCATGTCCACAGCCCATGCTGAGCC-----------------CTTCTGGAGCCACTGGAATGCTTGTTCCTGGGCATGTGATAAACCC-AGACAGCTTCCG-CTTGCAGGACAACTATGCGCATCTGGCAGCAGTAGCCAGAGG---GCCCATGGAAAGAAGATGGAGGTGAAACCAGATGCTGTGAGAGTACTTTATTAGTCAAAACTGCATACTATAGAAATGCTTT--AAAATGCAGC---AGAAGATGTGAAGAC--ACAAATGAACAAGCGCG---TAGTGACACATGGCTGTCAGAACACGGTGAAGAATCCACACTGCTT--CCCCCTTTACCTAGAAAAGGAGAGTTCTAGG--------ccacctcctcctcagcatactcctcctc---ctcctcctcctcGGCCGTGGCATCCTGATATTGCTGATATTCAGACACCAGGTCGTTCATGTTGCTC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44664048 790 + 86207423 ACACTGGGCTTGATTCCTGC---CTAGTCCCTGCCAGATATCCCATGCCCACCTCATTAAGAGAATGAGGCCACACAAACACACCCAGGCCGTCATGGTGATGGAGTGGCTGGGGTCCCACTTGCCCACCCTTCATTACTGGTCCAGAGCCAGCTGTCTGACCACATTCCTACCCTGAGATGGGACTTTGGGGACATTGTCCACCAGGG-TCACTGACCCCTTTTAAAGTTCCAGAAAC--ATGGCCAGCTGGTCCCCTAGAA-TTTGGCACATGGGATAAGCCAAGGCTTGCCTTCAGGAACAGGTTTTTCCACCACGTCGCTGCCCAAGGCCCAGGGCATCCCCAAGTTCGTATGAAGCCTGCCTGCCACGTCCACAGCCCATGCCGACCC-----------------CACCTGGAGCCACTGGAATGCTTGTTCCTGGGCATGTGATAAACCC-AGACAGCTTCAGCCTTGCAGGACAACTGTGGGCATCTGGCAGCAGTAGCCAGAGG---GCCCATGGAAAGAAGTTGGAGGGGAAACCAGATGCTGTGAAAATACTTTATTAGGCAAAACTGCATACTATAAAAATGCTTTAAAAAATGCAGGAGGAGAAGATGGGAAGAC--ACAAACGAACAAGCGCG---TAGTGACACATGGCTGTCAGAACACAGTAAAGAATCCACACTGCTTCCCCCCCTTTACCTAGAAAAGGAGCGTTCTAGG--------ccacctcctcctcagcatactcctcatc---ctcctcctcctcGGCCGTGGCATCCTGATATTGCTGATATTCAGACACCAGGTCGTTCATGTTGCTC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 54963 770 - 204787373 ACACTGGGTTTGATTTCTGCCCACTAGTCCCTGCCAGATATCCCATGCCCACCTC---AAGAGAATGAGGCCACACAAACACACCCAGGCCGTCATGGTGATGGAGCAGCTGGGGTCCTACTTGCCCACCCTTCATTGCTGGTTCAGAGCCAGCTGTCTGACCACATTCCTACCCTGAGATGGGACTTTGGGGACATTGCCCACCAGGG-TCACTGACCAC--TTAGGGTTCCAGAAACAGAGGGCCAGCAGGTCCCCTAGAAGTCTGGAACATGGGATAAGCCAAGGCTTGCCTTCA-GAACAGG-TTTTCCACCACGTGGCCGCCCAAGGCCCAGGGCATCCCCAGGTTCATGTGAAGCCTGCCTGCCATGTCCACAGCCCCTGCCCACCC-----------------CTCCTGGAGCCACTGGAATGCTTGTTCCTGGGCACAGGACAAACCC-AGACAGCTTCAGCCTTGCAGGACAACCATGCAAATCTGGCAGCCGTAGCCGGA--GGGGCCCATAGATAGAAGTTGGAGGTGAAGCCAGATGTTATGAGAATACTTCATTAGGCAAAATCGTATACTATAAAAATGCTTT--AAAATGCAGG---AGGAGAGGTGAAGAC--ACGAATGAACAAGTGCG---TAGTGACACATGGCAGTCAGAACACAGTAAAGAATCCACACTGCTT-TCCGCCTTTACCTAGAAAAGGAAAGTTCTAGGC-------CGtcctgctcctc------------------ctcctcctcctcGGCTGTGGCATCCTGATACTGTTGATACTCAGAAACCAGGTCGTTCATGTTGCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr6 5877 810 - 181584905 ACACTGGGCTTGATTCCTGCCCACTAGTCCCTGCCAGATATCCCATACCCACCTC---AAGAGAATGAGGCCACACAAACACACCCAGGCCGTCATGGTGATGGAGTGGCTGGGGTCCTACTTGCCCACCCTTCATTGCTGGTTCAGAGCCAGCTGTCTGACCACATTCCTACCGTGAGATGGGACTTTGGGGACATTGCCCACCAGGG-TCACTGACCACTTTTAGGGTTCCAGAAACAGAGGGCCAGCTGGTCCCCTAGAAGTCTGGAACATGGGATAAGCCAAGGCTTGCCTTCA-GAACAGG-TTTTCCACCACGTGGCCGCCCAAGGCCCAGGGCATCCCCAGGTTCATGTGAAGCCTGCCTGCCATGTCCACAGCCCCTGCCAACCCCTCCTGGAGCCACTGGACTCCTGGAGCCACTGGAATGCTTGTTCCGGGGCACATGACAAACCC-AGACAGCTTCAGCCTTGCAGGACAACCACGCAAATCTGGCAGCCGTAGCCAGAGGGGGGCCCATAGATAGAAGTTGGAGGTGAAGCCAGATGCTATGAGAATACTTTATTAGGCAAAAT--CATACTATAAAAATGCTTT--AAAATGCAGCAGGAGGAGAGGTGAAGAC--AC----GAACAAGTGCG---TAGTGACACATGGCAGTCAGAACACAGTAAAGAATCCACACTGCTT-CCCCCCTTTACCTAGAAAAGGAAAGTTCTAGGcctctcctcctcctcctcctcagcatattcctcaaa---ctcctcctcctcGGCTGTGGCATCCTGATACTGTTGATACTCAGAAACCAGGTCGTTCATGTTGCTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 113255 766 - 5309094 ACACTGGGCTTGATTCCTGCCCACTGGTCCCTGCCAGATGTCCCATGCCCACCTCATTAAGAGAATGAGGCCACATGGACACACCCAGGCCATCATGATGATGGAACGGCTGGGGTCCTACTTGCCCACCCTTCATTGCTGGTTCAGAACCAACTGTCTGATCACATTCCTACCCTG----GGGACATT------ATTGTCTACCAGGG-TCACTGATCACTTTTAAAGTTCCAGAAACAGAGGGCCAGCTGGTCCCCTAGAAGTTTGGTACATGGGATAAGCCAAGCCTTGCCTTCAGGAACAGG-TTTTCCACCACGTAGCTGCCCAAGGCCCAGGGCACCCCCAAGTTCATGTGAAGCCTGACTACCATGTCCACAGCCCATGCCGACCC-----------------CTCCTGGAACCACTGGAATGCTTGTTCCTGGGCGTGTGATAAGCCC-AGACAGCTTCAGTCTTGCAGGACAACTATGCGCATCTGGCAGCAGTAGCCA----AGAGCCTATAGAAAGAAGTTGGAGGTGAAACCAGATGCTACGAAAATACTTTATTAGGCAAAACCACATACTA-AAAAACACTTT--AAAATGCATC---AGGAGAGGTGAAGAC--AC----AAACTAGTGGG---TAGTGACACATGACTGTCAGAACACATTAAAGAATCCA----GTTT-CCCTACTCTACCCAGAAAAAGAAAGTTCTAGG--------CCACCTCCTCCTCAACACA---CTCAAA---CTCCTCCTGCTTGGCTGTGGCATCCTCCTGTTCTTGATACTGTTTGGCTAAGTAGTTCATGTTGCTC i macNem1.NW_012018355v1 C 0 C 0 s chlSab2.chr12 19266 759 + 108555830 ACACTGGGCTTGATTTCTGCCCACTAGTCCCTGCCAGATATCCCAAGCCCACCTC---AAGAGAATGAGGCCACACAAACACACCCAGGCCGTCATGGTGATGGAGTGGCTGGGGTCCTACTTGCCCACCCTTCATTGCTGGTTCAGAGCCAGCTGCCTGACCACATTCCTACCCTGAGATGGGACTTTGGGGACATTGCCCACCAGGG-TCACTGACCACTTTTAGGGTTCCAGAAACAGAGGGGCAGCTGGTCCCCTAGAAGTCTGGAACATGGGATAAGCCAAAGCTTGGCTTCA-GAACAGG-TTTTCCCCCACATAGCCGCCCAAGGCCCAGGGCATCCCCAAGTTCATGTGAAGCCTGCCTGCCATGTCCACAGCCCATGCCGACCC-----------------CTCCTGGAGCCACTGGAATGCTTGTTCCTGGGCACGCGACAAACCC-AGACAGCTTCACCCTTGCAGGACAACCGTGCACATCTGGCAGCCATAGCCGGAGG---GCCCATAGAAAGAAGTTGGAGGTGAAGCCAGATGCTATGAGAATACTTTATTAGGCAAAATCGTATACTATAAAAATGCTTT--AAATTGCAGC---AGGAGAGGTGAAGACAAAC----GAACAAGTGCG---TAGTGACACATGGCAGTCAGAATACAGTAAACAATCCACACTGCTT-CCCCCCTTTACCTAGGAAAGGAAAGTTCTAGGCCT-----CCTCCTCCTCCTCA------------------------------GCCATGGCATCCTGATACTGTTGATACTGAGAAACCAGGTCGTTCATGTTGCTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 5226 788 + 85016 ACACTGGACTTGATTTCTGCCCACTAGTCCCTGCCAGATATCCCATGTCCACCTC---AAGAGAATGAGGCCACACGAACACACCCAGGCCATCATGGTGATGGAGTGGCTGGGGTCCTACTTGCCCACCCTTCATTGCTGGTTCAGAGCCAGCTATCTGACCACATTCCTACCCTGAGATGGGACTTTGGGAACATTTCCCACCAGAG-TCACTGACCACTTTTAGGGTTACAGAAAC--AGGGCCAGCTGGTCCTCTAGAAGTCTAGAACATGGGATAAGCCAAGGCTTGCCTTCA-GAACAGG-TTTTCCACCACATAGCCGCCCAAGGCCCAGGGCATCCCCAGGTTTATGTGAAGCCTGTCTGCCATGTCCACAGCCCATGCCGACCC-----------------CTCCTGGAGCCACTGGAATGCTTGTTCCGGGGCACGCGACAAACCC-AGACAGCTCCAGCCTTGCAGGACAACCATGCAAATCTGGCAGCAGTAGCCAGAGGGGAGCCCATAGATAGAAGTTGGAGGTGAAGCCAGATGCTATGAGAATACTTTATTCAGCAAAATCGTATACTATAAAATTGCTTT--AAAATGCAGCAGGAGGAGAGGTGAAGAC--AC----GAACAAGTGCG---TAGTGATACATGGCAGTCAGAACACAGTAAAGAATCCACACTGCTT-CCCCCCTTTACCTAGAAAAGGAAAGTTCTAGGccg-----cctcctcctcctcagcatattcctcaaa---ctcctcctcctcGGCTGTGGCATCCTGATACTGTTGATACTCAGAAACCAGGTCGTTCATGTTGCTC i manLeu1.NW_012101680v1 C 0 I 1939 s colAng1.NW_012114821v1 21207 775 + 20575453 ACACTGGGCTTGTTTTCTGCCCACCAGTCCCTGCCAGATATCCCATGCCCCCCTC---AAGAGAATGAGGCCACACAAACACAGCCAGGCCATCATGGTGATGGAGTGGCTGGGGTCCTACTTGCCCACCCTTCATTGCTGGTTCAGAGCCAGCTGTCTGACCACATTCC-----TGAGATAGGACTTTGGGGACATTGTCCACCAGGG-TCACTGACCACTTTTAAAGTTCCAGAAACAGAAGGCCAGCTGGTCCCCTAAAAG--GGGAACATGGGATAAGCCAAGGCTTGCCTTCA-GAACAGG-TTTTCCACCACGTAGCCACCCAAGGCCCAGGGCATCCCCAGGTTCATATGAAGTCTGCCTGCCATGTCCACAGCCTATGCTGACCC-----------------CTCCTGGAGCCACTGGAATGCTTGTTCCTTGGCACGCGACAAACCC-AGACAGCTTCAGCCTTGCAG---AACCGTGCGCACCTGGCAGCCGTAGCCAGAGGAGGGCCCATAG--AAAAGTTGGAGGTGAAGCCAGATGCTATGAGAATACTTTATTAGGCAAAATCATATACTATAAAAATGCTTT--AAAATGCAGC---AGGAGAGGTGAAGAC--AC----GAACAAGTGCA---TAGTGACACATGGCAGTCAGAACACAGTAAAGAATCCACACTGCTT-CCCCCATTTACCTAGAAAAGGAAAGTTCTAGG--------cctcctcctcctcagcacactcctcaaactcctcctcctcctcGGCCGTGGCATCCTGATACTGCTGATACTCAGAAACCAGGTCGTTCATGTTGCTC i colAng1.NW_012114821v1 I 6 C 0 s calJac3.chr13 24334 779 - 117903854 ATGGTAGGCTCAATTCCTGCCCAGTAGCCCCTGCCAGATACCCCATGCCCACCTCATTAAGAGAATGAGGCCACACAGACCCACCCAGGCCGTTGTGGTGAGGGGGTGGCTGGGGCCCTACTTGCCCACCCTTCATGGCTGGTTCAGGGCCAGCTGTCCACCCACATTCCTGCCCTCAGACGATACATTGGGGACATCGTCCACTGGGG-TCACTGACCACTTATAAAGTTTCAGAAACAGAGGCCCAGCTGGTCCCCCGGAAGTTCAGTCCATGGGATAAGCCAAGGCTTGCCTTCAAAAATGGG-TTTCACATGAAGTGGCTGCCCAAGACCCAGGCCAGCCCCAAGTTTGCATGAAGCCTGCCTGCCATGTCCACAGCCCATGCCGCCCC-----------------CTCCAGGAGCCACTGGACTGCTTGCTCCGGGG-ATGTGAGAAGCCCAAGACAGATGCAGCCTTGCAGGACCACTATGCCCATCTGGAAGCAGTACCCAG-GG---GCCTATAGAAAGA------AGGTGAACCCAGATGCTATGAAAGTGCTTTATTAGGCCAAACTACTTACTACGAAAATGCTTT--AAAATGCAGCAGGAGGAGATGTAAACAC--TC----GAAGAAGAGCA---TAGTGACC-ATGGCTATCAGAACACACTAAAGAATCCACACTGCTT--CCCCCTTTACCTAGAAAAGGAAGCTTCTAGG--------CTACCTCCTCCTCAGCACACTCCTCAAA---CTCCTCCTCCTCAGCTGTGGCGTCTTGGTATTGCTGGTATTCTGACACCAGGTCATTAACGTTGCTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 95148 741 + 3265726 ACGGTGGGCTCAATTCCTGCCTACTAGCTCCTGCCACATA-CCCATGCCCACCTCATTAAGAGAGTGAGGCCACACGGACACACCCAGGCCATTATAGCAAGGGGGTGGCTGGGGCCCTGCTTGCCCACCCTTCATTGCTGGTTCAGGGCCAACTGTCCAATCACATTCCTATCCTGAGGTGATACACT-GGGACATTATACACCGGGG-TCACTGAACACTTATGAAATTCCACAAAC--AGGCCCAGCTGGTCTCCTGGAAGTTTGGTAAATAGGATAAACCAAGGCTTACCTTCAGAAACAGA-TTTTCCACCAAGTAGCTGCCCAAGGCCCAGGCCAGCCCCAAATTTGTGTAAAGCCTGCCTGCCATGTCCACAGCCCATGCCGACCC-----------------CTCCAGGAGCCACTGGACTTCTTGTTCCTGGG-ATGTGACAAGCCCAAGACAGCTGCAGCCTTGCAGGACCACTATGCCCATCTGGAAGCAGCACCCAG-GG---GCCTATAGAAAGAAG-TGGAGGTGAAACCAAGTGCCATAAAAATACTTTATTAGGCCAAACTACACATTATAAAAATGCTTT--AAAATGTAGCCAGAGGCTATGTAAAGAC--TC----AAAGAGGTACAAAGAAGTAACA-ATGGCGATCAGAATACACTAAAGAATCCACACTGCTT--CTCCCTTTACCTGGAAAAGGAAGCTTGTAGG--------CTA------------------------------CCTCCTTCTCAGCTGTAGCATCTTGGCATTACTGATATTCTGGCACCAGG--------------- i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 57868 778 - 883013 ATGGTGGGCTCGATTCCTGCCCACTAGCCCCTGCCAGATATCCCGTGCCCACCTCATTAAGAGAATGAAGCCATACAGACACACCCAGGCCATTATGGTGAGGGGGTGGCTGGGGCCCTACTTGCCCACCCTTCATTGCTGGTTCAGGGCCAACTGTCCGACCACATTCCTACCCTAAGATGATACATTGGGGACATAGTCCACTGGGG--CACTGACCACTTATAAAGTTTCAGAAACAGAGGCCCAGCTGCTCCCCTGGAAGTTCAGTACATGGGATAAGCCAAGGCTTA-TTTCAGAAATGGG-TTTCACAGGAAGTAGCTGCCCAAGGCCCAGGCCAGCCCCAAGTTTGCATGAAGCCTGCCTGCCATGTTCACAGCCCATGCGGACCC-----------------CTCCAGGAGCCACTGGACTGCTTGCTCCTGGG-ATGTGAGAAGCCCAAGACAGCTGCAGCCTTGGAGGACCACTATGCCCATCTGGAAGCAGTACCCAGAGG---GCCTATAGAAAGAAGTTGGAGGTGAAACCAGATGCTATAGAAATGTTTTATTAGGCCAAACTACTTACTATGAAAATGCTTT--AAAATGCAG---GAGGGGATGTAAAGAC--TC----AAAGAAGCATG---TAGTGACA-ATGGCTATCAGAACACACTAAAGAATCCACACTGCTT--CCCCCTTTACCTAGAAAAGGAAGCTTCTAGG--------CTA---CCTCCTCAGCACACTCCTCAAA---CTCCTTGTCCTCAGCTGTGGCATCTTGGTATTGCTGGTATTCTGACACCAGGTCATTAAGGTTGCTC i cebCap1.NW_016107942v1 C 0 C 0 e cerAty1.NW_012005170v1 870 6710 + 97742 I a score=59564.000000 s hg38.chr3_KI270784v1_alt 114939 11 + 184404 TCGGCCTCGGT s panTro5.chr3 5326 11 - 202621043 TCAGCCTCGGT i panTro5.chr3 C 0 C 0 s panPan2.chr12 80698214 11 - 135337776 TCGGCCTCCGT i panPan2.chr12 C 0 N 0 s gorGor5.CYUI01015884v1 18841 11 + 508821 TCGGCCTCGGT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44664838 11 + 86207423 TCGGCCTCGGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 55733 11 - 204787373 TCCGCCTCCGT i rheMac8.chr2 C 0 C 0 s macFas5.chr6 6687 11 - 181584905 TCCGCCTCCGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 114021 11 - 5309094 TAGGCCTCTAT i macNem1.NW_012018355v1 C 0 C 0 s chlSab2.chr12 20025 11 + 108555830 TCCGCCTCCGT i chlSab2.chr12 C 0 C 0 s colAng1.NW_012114821v1 21982 11 + 20575453 TCCGCCTCGGT i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 25113 11 - 117903854 TCGGCCTCGGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 95889 11 + 3265726 TCGGCCTCGGT i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 58646 11 - 883013 TTGGCCTCGGT i cebCap1.NW_016107942v1 C 0 C 0 e cerAty1.NW_012005170v1 870 6710 + 97742 I e manLeu1.NW_012101680v1 6014 1939 + 85016 I a score=6212163.000000 s hg38.chr3_KI270784v1_alt 114950 1017 + 184404 GAATTCCATCTCATCCATGCCCTCGCCCGTGTACCAGTAGAGGAAGGCCTTGCACCTGAACATTGCTGTAAACTGCTCTGAGACACGCTTGAAGAGTTCCTGGATGGCCGCATTATTCCCAACGAAGGTGGC-GACATTTTTAGCCCCCAGGGTGGGATGTCACAGACGGCTGTTTTTACGTTGTCGGGGAGCCAGTCAGCAAAGTAGCTGCTGTTCTTATCTTGAATGTTGAACATCTGTTCATCCACCTCCCTCATGGGCATGTGACCCTGGAAAATGGCAGCCGCCATTAGGTAGCGGCCGTGACG-GGGGTCACAGGCAGCCATCATGTTCTTAGCAT-CAAACATCTGCTGGGTGAGCTCAGCCACAGTCAAGGCCCGGTACTGCTGGCTGCCCCGGCTGGTCAGTGAGGCAAA-GCCAGGCATGAAGAAATGCAGC-CGGGGAAACGGGGCCATGTTCACGGCCAGCTTCCGCAGGTCAGCATTCAGCTGGCCCGGGAAGCGCAGGCACGTGGTGACCCCACTCATGGTAGCAGACACCAGGTGGTTCAGGTCACCATAGGTGGGTGTGGGCAGTTTTAGGGTCCTGGAACATATGTCATACAGCGCTTCGTTATCTATGCAGAAGGTCTCATCCGCGTTTTCTATGAGCTGGTGGACTGAGAGGGTGGCGTTGTAGGGCTCCACCACGGTGTCCGACA-CCTTGGGCGAGGGCAGGATGCTGAATGTGTTTATGATCCTGTCTGGGTACTCCTCCCGGATCTTACTAATGAGAAGGGTACCCATCCCAGACCCAGT-CCCCCCACCCAGGGAGTGGGTCAGCTGGAAACCCTGCAGGCAGTCACAGCTCTCAGCCTCCTTTCTGACAACGTCCATCACTGACTCCATCAGCTCCGTGTCTTCTGTGTAGCGTCCCTTGGCCCAGTTGTTTCCGGCCCCACACTGACCTGTAAGACAGCACAGCCGGTCACTCGACGGCCAGGTATACGGTCATCAGTGGTCACCACCATAATGCAGA s panTro5.chr3 5337 1018 - 202621043 GAATTCCATCTCATCCACGCCCTCGCCCGTGTACCAGTGGAGGAAGGCCTTGCGCCTGAACATTGCTGTAAACTGCTCTGAGACACACGTGAAGAGTTCCTGGATGGCCGTATTATTCCCAATGAAGGTGGCTGACATTTTTAGCCCCCGGGGTGGGATGTCACAGATGGCTGTTTTTACGTTGTTGGGGAGCCAGTCAGCAAAGTAGCTGCTGTTCTTATCTTGAATGTTGAACATTTGTTCATCCACCTCCCTCATGGGCATGCGACCCCTGAAAATGGCAGCCACCGTTAGGTAGCGGCCGTGACG-GGGGTCACAGGCAGCCATCATGTTCTTAGCAT-CAAACATCTGCTGGGTAAGCTCAGCCACAGTCAAGGCCCGGTACTGCTGGCTGCCCCGGCTGGTCAGTGGGGCAAA-GCTGGGCATGAAGAAATGCAGC-CGGGGAAACGGGACCATGTTCACGGCCAGCTTCCGCAGGTCAGCATTCAGCTGGCCTGGGAAGCACAGGCACGTGGTGACCCCACTCATGGTAGCAGACACCAGGTGGTTCAGGTCACCATAGGTGGGTGTGGGCAGTTTTAGGGTCCTGGAACATATGTCATACAGCGCTTCGTTATCTATGCAAAACGTCTCATCCGCATTTTCTATGAGCTGGTGGACTGAGAGGGTGGCGTTGTAGGGCTCCACCACGGTGTCTGACA-CCTTGGGCGAGGGCAGGATGCTGAATGTGTTTATGATCCTGTCTGGGTACTCCTCCCGGATCTTACTGATGAGAAGGGTACCCATCCCAGACCCAGT-TCCCCCACCCAGGGAGTGGGTCAGCTGGAAACCCTGCAGGCAGTCACAGCTCTCAGCCTCCTTTCTGACAACATCCATCACTGACTCCATCAGCTCCGCACCTTCTGTGTAGTGTCCCTTGGCCCAGTTGTTTCCGGCCCCACACTGACCTGTAAGACAGTACAGCCAGTCACTCGATGGCCAGGTATACTGTCATCAGTGGTCACCACCATAATGCAGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 0 1013 - 205426864 GAATTCCATCTCATCCATGCCCTCGCCCGTGTACCAGT---GGAAGGCCTTGCGCCTGAACATTGCTGTAAACTGCTCTGAGACACGCTTGAAGAGTTCCTGGATGGCTGTGTTGTTCCCAGTGAAGGTGGCTGACATTTTTAGCCCCCGGGGTGGGATGTCACAGACGGCTGTTTTTACGTTGTTGGGGAGCCAGTCAGCAAAGTAGCTGCTGTTCTTGTCTTGAATGTTGAACATTTGTTCATCCACCTCCCTCATGGGCATGCGACCCCTGAAAATGGCAGCCGCCGTTAGGTAGCGGCCGTGACG-GGGGTCACGGGCAGCCATCATGTTCTTAGCATACAAACATCTGCTGGGTAAGCTCAGCCACAGTCAAGGCCCGGTACTGCTGGCTGCCCTGGTTGGTCAGTGGGGCAAAGGCCGGGCATGAAGAAATGTAGCGTGGGAAAGTGGGGCCATGTTCATGGCCAGCTTCCGCAGGTCAGCATTCAGCTGGCCTGGGAAGCGCAGGCATGTGGTGACCCCACTCATGGTAGCAGACACCAGGTGGTTCAGGTCACCATAGGTGGGTGTGGGCAGTTTTAGAGTCCTGGAACATATGTCATATAGCGCTTCGTTATCTATGCAAAAGGTCTCATCCGCGTTTTCTATGAGCTGGTGGACTGAGAGGGTGGCGTTGTAGGGATCCACCACGGTGTCTGACG-CCTTGGGCGAGGGCAGGATGCTCAATGTGTTTATGACCCTGTCTGGGTACTCCTCCCGGATCTTACTGATGAGAAGGGTACCCATCCCAGACCCAGT-CCCCCCACCCAGGGAGTGGGTCAGCTGGAAACCCTGCAGGCAGTCACAGCTCTCAGCCTC----CTGACAACGTCCATCACTGAATCCATCAGCTCCGCGCCTTCTGTGTAGTGT-CCTTGGCCCAGTTGTTTCTGGCCCCACACTGACGTGTAAGACAGTACAGCCAGTCACTCGACGGCCAGGTATACGGTCATCAGTGGTCACCACCATAATGCAGA i panPan2.chr3 N 0 C 0 s gorGor5.CYUI01015884v1 18852 1014 + 508821 GAATTCCATCTCATCCATGCCCTCGCCCGTGTACCAGTGGAGGAAGGCCTTGCGCCTGAACATTGCTGTAAACTGCTCTGAGACACGCTTGAAGAGTTCCTGGATGGCCGTATTATTCCCAATGAAGGTGGC-GACATTTTTAGCCCCC-GGGTGGGATGTCACAGACGGCTGTTTTTACATTGTTGGGGAGCCAGTCAGCAAAGTAGCTGCTGTTCTTATCTTGAATGTTGAACATTTGTTCATCCACCTCCCTCATGGGCATGCGACCCCTGAAAATGGCAGCCGCCGTTAGGTAGCGGCCGTGACG-GGGGTCACAGGCAGCCATCATGTTCTTAGCAT-CAAACATCTGCTGGGTAAGCTCAGCCACAGTCAAGGCCCGGTACTGCTGGCTGCCCCGGCTGGTCAGTGGGGCAAA-GCCGGGCATGAAGAAATGCAGC-CGGGGAAACGGGACCATGTTCAC-GCCAGCTTCCGCAGGTCAGCATTCAGCTGGCCCGGGAAGCGCAGGCACGTGGTGACCCCACTCATGGTAGCAGACACCAGGTGGTTCAGGTCACCATAGGTGGGTGTGGGCAGTTTTAGGGTCCTGGAACATATGTCATATAGCGCTTCGTTATCTATGCAAAAGGTCTCATCCGCGTTTTCTATGAGCTGGTGGACTGAGAGGGTGGCGTTGTAGGGCTCCACCAC-GTGTCCGACA-CCTTGGGCGAGGGCAGGATGCTGAATGTGTTTATGATCCTGTCTGGGTACTCCTCCCGGATCTTACTGATGAGAAGGGTACCCATCCCAGACCCAGT-CCCCCCACCCAGGGAGTGGGTCAGCTGGAAACCCTGCAGACAGTCACAGCTCTCAGCCTCCTTTCTGACAACGTCCATCACTGACTCCATCAGCTCCGCGCCTTCTGTGTAGTGCCCCTTGGCCCAGTTGTTTCCGGCCCCACACTGACCTGTAAGACAGTACAGCCGGTCACTCGATGGCCAGATATACGGTCATCAGTGGTCACCACCATAATGCAGA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44664849 1015 + 86207423 GAATTCCATCTCATCCATGCCCTCGCCCGTGTACCAGTGGAGAAAGGCCTTGCGCCTGAACATTGCTGTGAACTGCTCTGAGACACGCTTGAAGAGTTCCTGGATGGCCGTATTATTCCCAATGAAGGTGGCCGACATTTTTAGCCCCCGGGGTGGGATGTCACAGACGGCTGTTTTTACATTGTTAGGGAGCCAGTCAGCAAAGTAGCTGCTGTTCTTATCCTGAATGTTGAACATTTGTTCATCCACCTCCCTCATGGGCCTGCGACCCCTGAAAATGGCAGCCGCCGTTAGGTAGCGGCCATGGCG-GGGGTCGCAAGCGGCCATCATATTCTTAGCAT-CAAACATCTGCTGGGTAAGCTCAGCCACAGTCAAGGCCCGGTACTGCTGGCTGCCCCGGCTGGTCAGTGGGGCAAA-GCCAGGCAAGAAGAAATGCAGC-CGGGGAAACGGGACCATGTTCACGGCCAGCTTCCGCAGGTCAGCATTCAGCTGGCCGGGGAAGCGCAGGCACGTGGTGACCCCACTCATGGTAGCAGACACCAGGTGGTTCAGGTCACCATAGGTGGGTGTGGGCAGTTTTAGGGTCCTGGAACATATGTCATATAGCGCTTCGTTATCTATGCAGAAGGTCTCGTCCGCATTTTCTATGAGCTGGTGGACTGAGAGGGTGGCGTTGTAGGGCTCCACCACGGTGTCCGACA-CCTTGGGCGAGGGCAGGATGCTGAATGTGTTTATGATCCTGTCTGGGTACTCCTCCCGGATCTTACTGAGCAGAAGGGTGCCCATCCCAGACCCAGT-CCCCCCACCCAGGGAGTGGGTCAGCTGGAAACCCTGCAGGCAGTCACAGCTCTCAGCCTCCTTTCTGACAACGTCCATCACTGACTCCATCAGCTCCGCGCCTTCTGTGTAGTGTCCCTTGGCCCAGTTGTTTCCGGCCCCACACTGACCTGTAAGACAGTACAGCCAGTCACTCGATGGCCAGGTGTACGGTCATCAGTGGT---CACCATAATGCAGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 55744 1012 - 204787373 AAATTCCATCTCATCCATCCCCTCGCCCGTATACCAATGGAGGAAGGCCTTGCGCCGGAACATTGCTGTAAACTGCTCTGAGACACGCTTGAAGAGCTCCTGGATGGCCGTGTTGTTCCCAATGAAGGTGGCTGACATTTTTAGCCCCCGGGGCGGGATGTCACAGACGGCTGTTTTGACATTGTGGGGGAGCCAGTCAGCGAAGTAGCTGCTG---TTATTTTGAATGTTGAACATTTGTTCATCCCCCTCCCTCATGGGCATGCGACCCCTGAAAATGGCATCTGCCGTTAGGTAGCGGCCATGACG-GGGGTCACACGCGGCCATCATATTCCTAGCAT-CAAACATCTGCTGCGTAAGCTCAGCCACCGTCAGGGCCCGGTACTGCTGGCTGCCCCGGCTGGTCAGTGGGGCAAA-GCCGGGCATGAAGAAATGCAGC-CGGGGAAACGGGACCATGTTCACGGCCAGCTTCCGCAGGTCAGCATTCAGCTGGCCTGGGAAGCGCAGGCACGTGGTGACCCCGCTCATGGTGGCAGACACCAGGTGGTTCAGGTCACCGTAGGTGGGCGTGGGCAGTTTCAGGGTCCTGGAACAGATGTCGTATAACGCTTCGTTGTCTATACAGAAGGTCTTGTCTGCATTTTCTATGAGCTGGTGGACGGAGAGGGTGGCGTTGTAGGGCTCCACCACCGTGTCTGACA-CCCTGGGCGAGGGCAGGATGCTGAATGTGTTTATGACCCTGTCTGGGTACTCCTCCCGGATCTTACTGAGCAGAAGGGTACCCATCCCAGACCCCGT-CCCCCCACCCAGGGAGTGGGTCAGCTGGAAACCCTGCAGGCAGTCACAGCTCTCAGCCTCCTTTCTGACAACGTCCATCACTGACTCCATCAGCTCCGCGCCTTCTGTGTAGTGCCCCTTGGCCCAGTTGTTTCCGGCCCCACTCTGACCTGTAAGACAGTACAGCCAGTCACTCGATGGCCAGGTATACGGTCATCAGGGGT---CACCATAATGCAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr6 6698 1015 - 181584905 AAATTCCATCTCATCCATCCCCTCGCCGGTATACCAATGGAGGAAGGCCTTGCGCCGGAACATTGCTGTAAACTGCTCTGAGACACGCTTGAAGAGCTCCTGGATGGCCGTGTTGTTCCCAATGAAGGTGGCTGACATTTTTAGCCCCCGGGGTGGGATGTCACAGACGGCTGTTTTGACATTGTGGGGGAGCCAGTCAGCAAAGTAGCTGCTGTTCTTATTTTGAATGTTGAACATTTGTTCATCCACCTCCCTCATGGGCATGCGACCCCTGAAAATGGCAGCCGCCGTTAGGTAGCGGCCATGACG-GGGATCACAAGCTGCCATCATATTCCTAGCAT-CAAACATCTGCTGCGTAAGCTCAGCCACCGTCAGGGCCCGGTACTGCTGGCTGCCCCGGCTGGTCAGTGGGGCAAA-GCCGGGCATGAAGAAATGCAGC-CGGGGAAATGGAACCATGTTCACGGCCAGCTTCCGCAGGTCAGCATTCAGCTGGCCTGGGAAGCGCAGGCACGTGGTGACCCCGCTCATGGTGGCAGACACCAGGTGGTTCAGGTCACCGTAGGTGGGCGTGGGCAGTTTCAGGGTCCTGGAACAGATGTCGTATAACGCTTCGTTGTCTATACAGAAGGTCTCGTCTGCATTTTCTATGAGCTGGTGGACGGAGAGGGTGGCGTTGTAGGGCTCCACCACCGTGTCTGACA-CCTTGGGCGAGGGCAGGATGCTGAATGTGTTTATGATCCTGTCTGGGTACTCCTCCCGGATCTTACTGAGCAGAAGGGTACCCATCCCAGACCCCGT-CCCCCCACCCAGGGAGTGGGTCAGCTGGAAACCCTGCAGGCAGTCACAGCTCTCAGCCTCCTTTCTGACAACGTCCATCACTGACTCCATCAGCTCCGCGCCTTCTGTGTAGTGTCCCCTGGCCCAGTTGTTTCCGGCCCCACTCTGACCTGTAAGACAGTACAGCCAGTCACTCGATGGCCAGGTATAGGGTCATCAGTGGT---CACCATAATGCAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 114032 1001 - 5309094 GAAATCTGTCTCATCCATTCCTTCGCCTGTGTACCAGTGGAGGTAGGCCCTGCGCCTGAACA-TGCTGTAAACTGCTCTGAGACACACTTGAAGAGTTCCTTGATGGCCGTGTTATTCCCAATAGCAACAGTCGAAGTTTTTAGCCCCCAGAGTGGGATGTTACAGAAGGCTGTTTTAA--------------TGGTCAGCAAAGTTGCTACTATTTTTATTTTGAAAGTTGAACATTTGTTCCTTCACCTCTCTCAGGCGTATTCGACCCCTGAAAATGGCAGCTGCCATTAGGTAGCTGCCATGACA-GGGGTCGCAGGCTG---TCATATGCCTAGTAT-CAAACATCTGCTGGGTAAGCTCAGCCACGGACAGGGCTGGGTACTGCTGGCTGCCCTGGCTGGTCAGTGGGGCAAA-GTTAGGAATGAAGAAATGCAGC-CGGGGAAATGGGACCATGTTCAGGGCCAGCTGCTGCAGGTTAGCATTCAGCTGGGCTGGGAAGTGCAGGCACGTGGTGACCCCACTCCTGGTAGCAGATGCCAGGTGGTTCAGATCACCATAGGTGGGTGTGGGCAGTTTTAGGGTGCTATCGCAGATGTCCAGTAAGGCTTCATTATCTAAATAGAATGTCCCATGTGAGTTTTCTATGCGCTCATTAAATGAGAGTGTTGTGTTATAGGGCTCCATCACGGTGTGTGACACCCTTGGGCGAGGGCAGGACGCTGAATGTGTTTATGATCTTGTCTGGATACTCCTCCCAGATCTTACTAATAAGAAGGGTACCCATCCCAGATCAAGT-CCCCCCACCCAAGGAGTGGATCAGCTGGAAACCCTGCAGGCAGTCACAGCTCTCAGCCTCCTTTCTGACAACGTCCATCACTGATTCCATCAGTTTTGCGCCTTCTGTGTAGCGCCCCTTGGCCCAGATTTTTCCGGCCCCACACTGACCTGTAAGACAGTACAGCCAGTCACTCGATGGCCAAGTATACCGTCATCAGTGGTCACCACCACAATGCAAA i macNem1.NW_012018355v1 C 0 C 0 s chlSab2.chr12 20036 1003 + 108555830 AAATTCCATCTCATCCATCCCCTCGCCCGTATACCAATGGAGGAAGGCCTTGCGCCGGAACATTGCTGTAAACTGCTCTGAGACACGCTTGAAGAGTTCCTGGATGGCCGTGTTGTTCCCAATGAAGGTGGCTGACATTTTTAGCCCCCGGGGTGGGATGTCACAGACGGCTGTTTTGACGTTGTGGGGGAGCCAGTCAGCGAAGTAGCTGCTGTTCTTATTTTGAATGTTGAACATTTGTTCATCCACCTCCCTCATGGGCATGCGACCCCTGAAAATGGCAGCCACCGTTAGGTAGCTGCCATGACG-GGGGTCACACGCGGCCATCATATTCCTAGCAT-CAAACATCTGCGGCATCAGCTCAGCCACCGTCAGGGCCCGGTACTGCTGGCTGCCCCGGCTGGTCAGTGGGGCAAA-CCCAGGCATGAAGAAATGCAGC-CGGGGAAACGGGACCATGTTCACGGCCAGCTTCCGCAGGTCAGCATTCAGCTGGCCTGGGAAGCGCAGGCACGTGGTGACCCCGCTCATGGTGGTAGACACCAGGTGGTTCAGGTCACCGTAGGTGGGCGTGGGCAGTTTCAGGGTCCTGGAACAGATGTCGTATAACGCTTCGTTGTCTATACAGAAGGTCTCGTCTGCATTTTCTATGAGCTGGTGGACGGAGAGGGTGGCATTGTAGGGCTCCACCA-------------CCTTGGGCGAGGGCAGGAGGCTAAATGTGTTTATGATCCTGTCTGGGTACTCCTCCCGGATCTTACTGAGCAGAAGGGTACCCATCCCAGACCCCGT-CCCCCCACCCAGGGAGTGGGTCAGCTGGAATCCCTGCAGGCAGTCACAGCTCTCAGCCTCCTTTCTGACAACGTCCATCACTGACTCCATCAGCTCCGCGCCTTCTGTGTAGTCCCCCTTGGCCCAGTTGTTTCCGGCCCCACACTGACCTGTAAGACAGTACAGCCAGTCACTCGATGGCCAGGTATACGGTCATCAGTGGT---CACCATAATGCAAA i chlSab2.chr12 C 0 C 0 s colAng1.NW_012114821v1 21993 1015 + 20575453 AAATTCCATCTCATCCATCCCCTCCCCAGTATACCAATGGAGGAAGGCCTTGCGCCGGAACATCGCTGTAAACTGCTCTGAGACACGCTTGAAGAGTTCCTGGATGGCCGTGTTGTTCCCAATGAAGGTGGCTGACATTTTTAGCCCCCGGGGTGGGATGTCACAGACGGCCGTTTTGACGTTGTGGGGGAGCCAGTCAGCGAAGTAGCTGCTGTTCTTATTTTGAATGTTGAACATTTGTTCATCCACCTCCCTCATGGGCATGCGACCCCTGAAAATGGCAGCCGCCGTTAGGTAGCGGCCATGACG-GGGGTCACACGCGGCCATCATATTTCTAGCAT-CAAACATCTGCTGCGTAAGCTCAGCCACCGTCAGGGCCCGGTACTGCTGGCTGCCCCGGCTGGTCAGTGGGGCAAA-GCCAGGCATGAAGAAATGCAGC-CGGGGAAACGGGACCATGTTCACGGCCAGCTTCCGCAGGTCAGCATTCAGCTGGCCGGGGAAGCGCAGGCACGTGGTGACCCCGCTCATGGTGGCAGACACCAGGTGGTTCAGGTCACCATAGGTGGGCGTGGGCAGTTTCAGGGTCCTGGAACATATGTCATATAATGCTTCATTGTCTATACAGAAGGTCTCGTCTGCGTTTTCTATGAGCTGGTGGACCGAGAGGGTGGCATTATAGGGCTCCACCACCGTGTCTGACA-CCTTGGGCGAGGGCAGGATGCTGAAGGTGTTTATGATCCGGTCTGGGTACTCCTCCCGGATCTTACTGAGCAGAAGGGTGCCCATCCCAGACCCCGT-CCCCCCACCCAGGGAGTGGGTCAGCTGGAAACCCTGCAGGCAGTCACAGCTCTCAGCCTCCTTTCTGACAACGTCCATCACTGACTCCATCAGCTCCGCGCCTTCTGTGTAGTGCCCCCTGGCCCAGTTGTTTCCGGCCCCACTCTGACCTGTGAGACAGTACAGCCAGTCACTCGATGGCCAGGTATACGGTCATCAGTGGT---CACCATAATGCAAA i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 25124 1018 - 117903854 GAACTCCATCTCATCCATGCCCTCGCCCGTGTACCAGTGCAGGAAGGCCTTGCGCCTGAACATAGCTGTAAACCGTTCGGAGACGCGTTTGAAGAGCTCTTGGATCGCCGTGTTGTTACCAATGAAGGTGGCTGACATTTTTAGCCCCCGGGGTGGGATGTCACAGACGGCTGTTTTCACGTTGTGAGGGAGCCATTCAGCAAAGTAGCTGCTGTTCTTGTTCTGAATGTTGAACATTTGCTCATCCACCTCCCTCATGGACATGCGACCTCTGAAAATGGTCGCCACGGTTAGGTAGCGGCCATGACG-GGGGTCACAGGCGGCCATCATATTCTTAGCAT-CGAAGAGTTGCTGAGTGAGCTCAGCCACGGTCAGGGCCCGGTATTGCTGGCTGCCCCGACTGGTCAGCGGGGCAAA-GCCGGGCATGAAGAAGTGCAGT-CGGGGAAATGGAACCATGTTCACTGCCAGCTTCCGCAGGTCCGCATTCAGCTGGCCCGGGAAGCGCAGGCACGTGGTGACCCCACTCATGGTAGCAGACACCAGGTGATTCAGGTCACCGTAGGTGGGTGTGGTCAGTTTTAAGGTCCTGGAACAGATGTTATAGAGCGCTTCATTATCGATGCAGAACGTCTCGTCTGCATTTTCTATTAGCTGGTGGATGGAGAGGGTGGCATTGTAGGGCTCCACCACGGTGTCTGACA-CCTTGGGTGAGGGCAGGATGCTGAATGTGTTTATAATCCTGTCTGGGTACTCCTCTCGAATTTTGCCCATGAGAAGAGTACCCATCCCAGACCCAGT-CCCCCCACCCAGGGAGTGGGTCAGCTGGAAACCCTGCAGGCAATCACAGCTCTCAGCTTCTTTCCTCACAACATCCATCACCGACTCCATCAGCTCCGCGCCTTCCGTGTAGTACCCCTTGGCCCAGTTGTTCCCGGCCCCACACTGACCTGTAAGGTAGTTCAGTCAGTCACTCGATGGCCATGTATATGGTCATCAGTGGTCACCACCACAATGCAAA i calJac3.chr13 C 0 I 5738 s saiBol1.JH378277 95900 995 + 3265726 GAACTTCATCTCATCCATGCCCTCGCTCGCCTACCAGTGCAGGAAGGCCTTGCGCTGGAACATAGCTGTAAACTGTT----ATCGCATTTGAAGAGCTCCTGGATGGCTGTGTTGTTACCGATGAAGGTGGCCGACATTTTTAGCCCTTAGGGTGGGATGTCCCAGACGGCTGTTTT--TGTTGTGAGGGAGCCACTCAGCAAAGTAGCTGCTGTTCTTGTTCTGGATATTGAGCATTTGCTCATTCACCTCCCTGATGGACATGTGACCTCTGAAAATGGCAGCCACGGTTAGGTAGCAGCCATGTCGAGGGGTCACAGGTAGCCATAATATTCTTAGCAT-TGAATAGCTGCTGAGTGAGCTCAGCCACGGTCAGGGCCCAGTACTGCTGG---------CTGGTCAGTGAGGCAAA-GCCAGGCATAAAGAAGGGCAGC-CCAGGAAATGGAACCACGTGCACAGGCAGCTTCGGCAGGTTGCCAGCTG--TGGCCCTGGAAGTGCAAGCACGTGGTGACCCCACTCATGGTAGCAGACACCAGGTGATTCAGGTCACCATAGGTGGGTGTGGTCAGTTTTAAGGTTCTGGAATAGATGTTATGGAGTGCTTCATTATCGATGCAGAACGTTGCATCAGCATTTTCTATGAGCTGGTTGATGGAAAGGGTGGCATTGTGGGGCTCTACCATGGTGTCTGACA-CCTTGGGCTAGGGCAGAACACTGAATGTGTTTATGATCCCGTCTGGGTACTCCTCCCAAATTTCACCCGTGAGAAGTGTACCCATCCC-TACCCAGTACCCCCTGCCCAGGGAGTGGGTCAGCTAGAAACCCTGCAGGCAATCACAGCTCTCAGCCTCTCTTCTCACAACATCCATCACTGATTCCATCAGCTCCACACCTTCTGTGTAGTACCCATTGGCCCAGTTGTTACTGGCCCCACACTGACCTGTAAGGTAGTACAGCCAGTCAGTCGATGGCCAGGTAAATG-------GCAGTCACTACCACAATGCAAA i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 58657 1010 - 883013 GAACTCCATCTCATCCATGCCCTCGCCCGTGTACCAGTGCAGGAAGGCCTTGCGCCTGAACATAGCTGTAAACTGTTCAGAGATGCGTTTGAAGAGCTCTTGGATCGCTGTGTTGTTACCAATGAAGGTGGCCGACATTTTTAGCCCCCGGGGTGGGATGTCACAGACGGCTGTTTTCACATTGTGAGGGAGCCATTCAGCAAAGTAGCAGCTGTTCTTATTTTGAATGTTGAACATTTGCTCATCCACCTCCCTCATGGACATGCGACCTCTAAAAATGGCAGCCATAGTTAGGTAGCGACCATGACG-GGGGTCGTAGGCGGCCATCATATTCTTAGCAT-CAAAGAGTTGCTGAGTGAGCTCAGCCACGGTCAGGGCCCAGTACTGCTGGCTGCCCCAGCTGGTCAGCTGGGCAAA-GCTGGGCATGAAGAAGTGCAGC-TGGGGCAATGGAACCATGTTCACAGCCAGCTTCCGTAGGTCGGCATTCAGCTGGCCCAGG--------GCACGTGGTGACCCCACTCATGGTAGCAGACACCAGGTGATTCAGGTCACCGTAGGTGGGTGTGGTCAGTTTTAAGGTCCTGGAACAGATGTTATGGAGCGCTTCATTATCAATGCAGAACGTCTTGTCTGCACTTTCTATGAGCTGGTGGATAGAGAGGGTGGCATTGTAGGGCTCCACCACCATGTCTGACA-CCTTGGGTGAGGGCACGACGCTGAATATGTTTATGATCCTGTCTGGGTACTCCTCCCGGATTTTGCCCATGAGAAGGGTACCCATCCCAGACGCAGT-GCCCCCACCTAGGGAGTGGGTCAGCTGGAAACCCTGCAGGCAATCACAGCTCTCAGCCTCTCTTCTCACAACATCCATCACCGACTCCATCAGTTCCACGCCTTCTGTGTAGTACCCCTTGGCCCAGTTGTTCGAGGCCCCACACTGACCTGTAAGGTAGTGCAGTCAGCCACTCGATGGCCAGGTATATGGTCATCCGTGGTCACCACCACAATGCAAA i cebCap1.NW_016107942v1 C 0 C 0 e cerAty1.NW_012005170v1 870 6710 + 97742 I e manLeu1.NW_012101680v1 6014 1939 + 85016 I a score=7098.000000 s hg38.chr3_KI270784v1_alt 115967 1 + 184404 A s panTro5.chr3 6355 1 - 202621043 A i panTro5.chr3 C 0 I 5424 s panPan2.chr3 1013 1 - 205426864 A i panPan2.chr3 C 0 I 5681 s gorGor5.CYUI01015884v1 19866 1 + 508821 A i gorGor5.CYUI01015884v1 C 0 I 5390 s nomLeu3.chr21 44665864 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 56756 1 - 204787373 A i rheMac8.chr2 C 0 I 5976 s macFas5.chr6 7713 1 - 181584905 A i macFas5.chr6 C 0 I 3605 s macNem1.NW_012018355v1 115033 1 - 5309094 A i macNem1.NW_012018355v1 C 0 I 5250 s chlSab2.chr12 21039 1 + 108555830 A i chlSab2.chr12 C 0 I 5998 s colAng1.NW_012114821v1 23008 1 + 20575453 A i colAng1.NW_012114821v1 C 0 I 5418 s calJac3.chr13 31880 1 - 117903854 a i calJac3.chr13 I 5738 C 0 s saiBol1.JH378277 96895 1 + 3265726 A i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 59667 1 - 883013 A i cebCap1.NW_016107942v1 C 0 I 5306 e cerAty1.NW_012005170v1 870 6710 + 97742 I e manLeu1.NW_012101680v1 6014 1939 + 85016 I a score=70675.000000 s hg38.chr3_KI270784v1_alt 115968 8 + 184404 AGggccag s panTro5.chr3 11780 8 - 202621043 agggccag i panTro5.chr3 I 5424 C 0 s panPan2.chr3 6695 8 - 205426864 agggccag i panPan2.chr3 I 5681 C 0 s gorGor5.CYUI01015884v1 25257 8 + 508821 agggccag i gorGor5.CYUI01015884v1 I 5390 C 0 s nomLeu3.chr21 44665865 8 + 86207423 AGCGCCGG i nomLeu3.chr21 C 0 I 6335 s rheMac8.chr2 62733 8 - 204787373 agggccag i rheMac8.chr2 I 5976 C 0 s macFas5.chr6 11319 8 - 181584905 agggccag i macFas5.chr6 I 3605 C 0 s macNem1.NW_012018355v1 120284 8 - 5309094 agggccag i macNem1.NW_012018355v1 I 5250 C 0 s cerAty1.NW_012005170v1 7580 8 + 97742 agggccag i cerAty1.NW_012005170v1 I 6710 C 0 s chlSab2.chr12 27038 8 + 108555830 agggccag i chlSab2.chr12 I 5998 C 0 s manLeu1.NW_012101680v1 7953 8 + 85016 agggccag i manLeu1.NW_012101680v1 I 1939 C 0 s colAng1.NW_012114821v1 28427 8 + 20575453 agggccag i colAng1.NW_012114821v1 I 5418 C 0 s calJac3.chr13 31881 8 - 117903854 agggccaa i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 96896 8 + 3265726 AAGGCCAA i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 64974 8 - 883013 agggccaa i cebCap1.NW_016107942v1 I 5306 C 0 a score=41678.000000 s hg38.chr3_KI270784v1_alt 115976 6 + 184404 gggtta s panTro5.chr3 11788 6 - 202621043 gggtta i panTro5.chr3 C 0 C 0 s panPan2.chr3 6703 6 - 205426864 gggtta i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 25265 6 + 508821 gggtta i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr2 62741 6 - 204787373 gggtta i rheMac8.chr2 C 0 C 0 s macFas5.chr6 11327 6 - 181584905 gggtta i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 120292 6 - 5309094 ggctta i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012005170v1 7588 6 + 97742 gggtta i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 27046 6 + 108555830 gggtta i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 7961 6 + 85016 gggtta i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 28435 6 + 20575453 gggtta i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 31889 6 - 117903854 gggctg i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 96904 6 + 3265726 GTGTCA i saiBol1.JH378277 C 0 I 4752 s cebCap1.NW_016107942v1 64982 6 - 883013 gggtta i cebCap1.NW_016107942v1 C 0 C 0 e nomLeu3.chr21 44665873 6335 + 86207423 I a score=7733345.000000 s hg38.chr3_KI270784v1_alt 115982 1269 + 184404 aggggctgcctctgaagtggtggagagcacaaggctgcagctagaagctgggcctcttgcgagatttgctttattttatgttgtctctgccctattcctgtgatggaaaactgcacaatccaaatctaaaatctgatccatgggagtctggaagtctaaggctgcttttggtggcttcctgcagatatca----gaagcagactgggctataaaataaactgctagcaatgcctgtcccttcttggagtcagggtcagtgttggtgtatttcctcaaagtctaaattatccacccttgtaataaggctaggtttt---------------------------------------------------------------------------attccttcaaggagtcaaatgatcataattttttatcccaatttctatatctctctatatcccactttcttcctaattcatttgtcttttctagattctagttctcttttgggtcctagtcaggcactgctgtgcctcctacttgataggtgtcatgtccctggttgcaggctgccaccctattagcatgtactctagccactcctataatgcactgcttttctaccatgcagcaggtaaacataaatatatgcaaatcctgcctgggcaaatcatacatccaggttggcctcttaaa------------ttagtctatgagttttcccagaacctctgaaaactgttttagtttctccttgcatatggctaattcagacatagaaaagggtacatatacctatatagtgtccttattatcatctgtcacttcccagagagggcaaacattcaagtttgccagctgataagaggccccactgcatgttattctggtgaagctcgggtgtttcgagagtggggtgtgtatgtaagacaggactcgaagggcagggagaagaggatgaccagacactagataaccctggaaaactagaaggaattaataacatgttgcacacctcaccagaactggaaggagtctgacagtgttcttatggggtgctcagactggcagggg-gagttcagccccagctaagaaaagcctgatattaagaggcacttgcattaaaagggtaatcaattatgtgccatccctattttgtcttttcctccatcaaacatatagaagcccaattta--attttttatcctgaccaagcatcagagaagcctgtatataatgtatttcctcccac--------ttagtttctcttctataaaacaaattaagCTG----CAAAAAAAGAAGTCAGGCCAAACA------------GGGGAAATGGGAAGGCTGTAACTTGTATATTGTAATGTATTAGTCCATTTTC-------AAAATGA s panTro5.chr3 11794 1333 - 202621043 aggggctgcctctgaagtggtggagagcacaaggctgcagctagaagctgggcctcttgcgagatttgctttattttatgttgtctctgccctattcctgtgatggaaaactgcacaatccaagtctaaaatctgatccatgggagtctggaagtgtaaggctgcttttggtagcttcctatagatatca----gaagcagactgggctataaaataaactgctagcaatgcctgtcccttcttggagtcagggtcagtgttggcgtatttcctcaaagtctaaattatccacccttgtaataaggctaggttttcatcttttccctgagtacttttcc-------agactttataaaaatt-aaaagctttatcatat---ttttttttattccttcaaggagtcaaatgatcataattttttatcccaatttctatatctctctatatcccactttcttcctaattcatttgtcttttctagattctagttctcttttgggccctagtcaggcactgctgtgtctcctacttgataggtgtcatgtctctggttgcaggctgccaccctattagcatgtaccctagccactcctataatgcactgcttttctaccatgcagcaggtaaacataaatatatgcaaatcctgcctggtcaaatcatacatccaggttggcctcttaaa------------ttagtctatgaattttcccagaacctctgaaaactgttttagtttctccttgcatatggctaattcagacatagaaaagggtacatatacctatatagtgtccttattatcatctgtcacttcccagagagggcaaacattcaagtttgccagctgataagaggccccactgcgtgttgttctggtgaagctcgggtgtttcgagagtggggtgtgtatgtaagacaggactcgaagggcagggagaagaggatgaccagacactagataaccctggaaaactagaaggaattaataacatgtttcacacctcaccagaactggaaggagtctgacagtgttcttatggggtgctcagactggcagggg-gagttcagccccagctaagaaaagcctgatattaagaggcacttgcattaaaagggtaatcaattatgtgccgtccctattttgtcttttcctccatcaaacatgtagaagcccaattta--attttttatcctgaccaagcatcagagaagcctgtatataatgtatttcctcccac--------ttagtttctcttctataaaacaaattaagCTG----CAAAAAAAGAAGTCAGGCCAAACA------------GGGGAAATGGGAAGGCTGTAACTTGTATATTGTAATGTATTAGTCCATTTTC-------AAAATGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 6709 1334 - 205426864 aggggctgcctctgaagtggtggagagcacaaggctgcagctagaagctgggcctcttgtgagatttgctttattttatgttgtctctgccctattcctgtgatggaaaactgcacaatccaaatctaaaatctgatccatgggagtctggaagtgtaaggctgcttttggtggcttcctgcagatatca----gaagcagactgggctataaaataaactgctagcaatgcctgtcccttcttggagtcagggtcagtgttggtgtatttcctcaaagtctaaattatctacccttgtaataaggctaggttttcatcttttctctgagtagttttcc-------agactttataaaaattaaaaagctttatcatac---ttttttttattccttcaaggagtcaaatgatcataattttttatcccaatttctatatctctctatatcccactttcttcctaattcatttgtcttttctagattctagttctcttttgggtcctagtcaggcactgctgtgcctcctacttgataggtgtcatgtccctggttgcaggctgccaccctattagcatgtaccctagccactcctataatgcactgcttttctaccatgcagcaggtaaacataaatatatgcaaatcctgcctggtcaaatcatacatccaggttggcctcttaaa------------ttagtctatgaattttcccagaacctctgaaaactgttttagtttctccttgcatatggctaattcagacatagaaaagggtacatatacctatatagtgtccttattatcatctgtcacttcccagagagggcaaacattcaagtctgccagctgataagaggccccactgcgtgttgttctggtgaagctcgggtgtttcgagagtggggtgtgtatgtaagacaggactcgaagggcagggagaagaggaTGACCAGACACTAGATAACCCTGGAAAACTAGACGGAATTAATAACATGTTGCACATCTCACCAGAACTGGAAGGAGTCTGACAGTGTTCTTATGGGGTGCTCAGACTGGCAGGGG-GAGTTCAGCCCCAGCTAAGAAAAGCCTGATATTAagaggcacttgcattaaaagggtaatcaattatgtgccgtccctattttgtcttttcctccatcaaacatgtagaagcccaattta--attttttatcctgaccaagcatcagagaagcctgtatataatgtatttcctcccac--------ttagtttctcttctataaaacaaattaagCTG----CAAAAAAAGAAGTCAGGCCCAACA------------GGGGAAATGGGAAGGCTGTAACTTGTATATTGTAATGTATCAGTCCATTTTC-------AAAGTGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 25271 1335 + 508821 aggggctgcttctgaagtggtggagagcacaaggctgcagctagaagctgggcctcttgcgagacttgctttattttacgttgtctctgccctattcctgtgatggaaaactgcaaaatccaagtctaaaatctgatccatgggagtctggaagcctaaggctgcttttggcggcttcctgcagatatca----gaagcaggctgggctataaagtaaactgctagcaatgcctgtcccttctgggagtcagggtcagtgtcagtgtatttcctcaaagtctaaattatccacccttgtaataaggctaggttttcatcttttccctgagtaattttcc-------agactttataaaaattaaaaagctttatcacac--tttttttttattccttcaaggagtcaaatgatcataattttttatcccaatttctatatctctctatatcccactttcttcctaattcatttgtcttttctagattctagttctctttcaggtcctagtcaggcactgctgtgcctcctacttaataggtgtcatgtccctggttgcaggctgccaccctattagcatgtgccctagccactcctataatgcactgcttttctaccatgcagcaggtaaacataaatatatgcaaatcctgcctggtcaaatcatacatccaggttggcctcttaaa------------ttagtctatgaattttcctggaacctctgaaaactgttttagtttctccttgcatatggctaattcagacatagaaaagggtacatatacctatatagtgtccttattatcatctgtcacttcccagagagggcaaacattcaagtttgccagctgataagaggccccactgcatgttgttccggtgaagctcaggtgtttcgagagtggggtgtgtatgtaagacaggacttgaagggcagggaggagaggatgaccagacagtagataaccctggaaaactagaaggaattaataacatgttgcacacctcaccagaactgggaggagtctgacagtgttcttatggggtgctcagactggcagggg-gagttcagccccagctaagaaaagcctgatattaagaggcacttgcattaaaagggtaatcaattatgtgccgtccctattttgtcttttcctccatcaaacatatagaagcccaattta--attttttatcctgaccaagcatcagagaagcctgtatataatgtatttcctcccat--------ttagtttctcttctataaaacaaattaagCTG----CAAAAAAAGAAGTCAGGCCAAACA------------GGGGAAATGGGAAGGCTGTAACTTGTATATTGTAATGTATTAGTCCATTTTC-------AAAATGG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr2 62747 1290 - 204787373 aggggctgcctctgaaatggtggagagcacaagtctgcagctagaagctgggcctcttgggagatttgctttattttatgttttctctgtcctattcctgtgatggaaaactgcagaatccaagtctaaaatctgatccacgggagtctggaagcctaaggctgcttttggtggcttcctgcagatatca----gaagcagactgggctctaaaataaactcctagcaatgcctgtcccttcttgga--------cagtgttagtgtattccctcaaagtctaaattatccatccttggaataaggctaggttttcatcttttccctgagtaattttcc-------agactttgtaaaaatcaaaaagctttatcacac----tttttttattccttcaaggagtcaaatgatcataattttt----------------tctctctatatctcactttcttcctaattcatttctcttttctagattctagttctcttttgggtcctagtcagacactgctgtgcctcctacttgataggtgtcatgtccctggttgcaggctgccaccctgttagcatgtgcactaaccactcccgtaatacactgcttttctaccatgcagcaggtgagcataaatataagcaaatcttgcctggtcagatcatacatcaaggttagcctctcaaa------------tttgtctatgaattttcctggaacctctgaaagctgttttagtgt----ttggctatggctaactcagacatagaaaagggtccatatacctatatagtgtccctattatcatctgtcacttcccagagagggcaaacattcaactttgccagctgataagaggccccaccgcatgttgttctggtgaagctcaggtgttttgagagtggagtatgtatgtaagacaggactcgaagggcagggagaagatgatgcccggacactagataactctggaaaactagaagaaattaataacatgttgcacacctcaccagaactggaaggagt----ctgtgttcttatggggtgctcagactggcaggggagagttcagcctcagctaagaaaagcctaatattaagaggcactttcattagaagggtaatcaattatgtgccatccctattttgtcttttcctccatcaaatatatacaagcccatttta--actttttatcctgaccaagtatcagagaggcctgtatgtaaagtatttcctcccatttagtttcttagtttctcttctataaaacaaattaa-ctg----caaAAAAGGGGA-----------G-------------GGGGAATGGGAAGGCTGTAACTTGTATGTTGTAAtgtattagtccattttc-------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr6 11333 1305 - 181584905 aggggctgcctctgaaatggtggagagcacaaggcttcagctagaagctgggcctcttgggagatttgctttattttatgttttctctgccctattcctgtgatggaaaactgcagaatccaagtctaaaatctgaaccacgggagtctggaaggctaaggctgcttttggcggcttcctgcagatatca----gaagcagactgggctataaaataaactcctagcaatgcctgtcccttcttggagtcagggtcagtgttagtgtattccctgaaagcctatattatccacccttgtaataaggctaggttttcatcttctccctgagtaattttcc-------agactttgtaaaaatcaaaaagctttatcacac---tttttttgattccttcaaggagtcaaatgatcataattttt----------------tctctatatatcccactttcttcccaattcatttctcttttctagattctagttctctttggggtcctagtcaggcactgctgtgcctcctacttgataggtgtcatgtccctggttgcaggctgccaccctgttagcatgtgcactaaccactcccgtaatacactgcttttctaccacgcagcaggtaaacacaaatatatgcaaatcttgcctggtcagatcatacatcaaggttagcctttcaaa------------tttgtctgtgaattttcctggaacctctgaaagctgttttagtttttccttgcatatggctaattcagatatagaaaagggtccatatacctatatagtgtccctattatcatctgtcacttcccagagagggcaaacattcaactttgccagctgataagaggccctgccgcatgttgttctggtgaagctcaggtgtttcgagagtggggtatgtatgtaagacaggactcgaagggcagggagaagATGATGCCCGGACACTAGATAACTCTGGAAAACCAGAAGAAATTAATAACATGTTGCACACCTCACCAGAACTGGAAGGAGT----CTGTGTTTTTACGGGGTGCTCGGACTGGCAGGGGAGAGTTCAGCCCCAGCTAAGAAAAGCCTAATATTAagaggcacttgcattagaagggtaatcaattatgtgccatccctattttgtcttttcctccatcaaacatatagaagcccatttta--actttttatcttgaccaagtatcagagaagcctgtatgtaaagtatttcctcccatttagtttcttagtttctcttctataaaacaaattaagCTG----CAAAAAAAGGGG-----------G------------AGGGGAATGGGAAGGCTGTAACTTGTATGTTGTAATGTATTGGTCCATTTTC-------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 120298 1290 - 5309094 aaggactgcctctgaagtggtggagagcacaaggctgcagctagaagcagggcctctttggagatttgctttattttgtgttttctctgccctattcctgtgatggaaagctgcaaaatccaagtctaaaagctgatccatgggagtctgaaagcctaaggctgcttttggcggcttcctgcagatatca----gaagcagactgggctataaaataaactcctaagaatgcctgtcccttcttggagtcagggtcagtgttagtgtatctcctcaaagtctaaattatccaccctagtaataaggctaggttttcatctttcccctgagtaattttcc-------agactttataaaaattaaaaagctttatcacactttttttttttattccttcaaggagtcaaatgatcataattttt----------------tctctatatgtcccacttttttcctaattcatttctcttttctagattctagttctcttttgggtcctggtcaggcactgctgtgcctcctacctgataggtgccacgtccctggttacaggctgccaccctattagcaggtgctctagccactcccgtaatacactgcttttctaccatgcagcaggtaaacataaatatatgcaaatcttgcctg--------------------------cttaaa------------tttgtctgtgaattttcccggaacctctgaacactgttttagtttttccttgcatatggttaattcagacatagaaaagggtacatatacctatatagtgtccctattatcatctgtcacttcccagagaggccaaaaattcagctttgacagctgacaagaggccccactgtgtgttgttctggggaagctcgggtgtttcgagagtggggtatgtatgtaagataggactcgaagggcagggggaagATGATGACTGGACACTAGATAACCGTGGAAAACTAGAAGGAATGAATAACATGCTGCACACCTCACCAGAACTGGAAGGAGTCTGACTGTATTCTTATGGGGTGCTTGGACTGGCAGGGGAGAGTTCAGCCCCAGCTGAGAAAAGCCTAATATTAAGAGGCACTCGCATTAGAAGGGTAATCAATTATTTGCTGTCCCTATTTTGTCTTTTCCTCCATCATACATATAGGAGCCCATTTTA--ATTTTTTATCCTGACCAAGCATCAGAGAAGCCTGTATATAATGTATTTCCTCCCA--------CTTAGTTTCTCTTCTATAAAACAAATTAAGCTG----CAAAAAAATGGA-----------GTCATATTGAACAGGGGAAATGGGAAGGCTGTAACTTGTATGTTGTAATGTATGAGTCCATTTTC-------------- i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012005170v1 7594 1305 + 97742 aggggccgcctctgaagtggtggagagcacaaggctgcagctagaagctgggcctcttgggagatttgctttattttatgttttctctgccctattcctgtgatggaaaactgcagaatccaagtctaaaatctgatccatgggagtctggaaggctaaggctgcttttggcggcttcctgcagatatca----gaagcagactgggctacaaaataaactcctagcaatgcctgtcccttcttggagtcaggatcagtgttagtgtattccctcaaagcctatattatccactcttgtaataaagctaggttttcatcttctccctgagtaattttcc-------agactttgtaaaaatcaaaaagctttatcacac---tttttttgattccttcaaggagtcaaatgatcataattttt----------------tctctctatatcccactttcttcccaattcatttctcttttctagattctatttctcttttgggtcctagtcaggcactgctgtgcctcctacttgataggtgtcaggtccctggttgcaggctgccaccctgttagcaggtgctctagccactcccataatacactgcttttctaccacgcagcaggtaaacacaaatatatgcaaatcttgcctggtcagatcatacatcaaggttagcctttcaaa------------tttgtctacaaattttcctggaacctctgaaagctgttttagtttttccttgcatatggctaactcagacacagaaaggggtccatatacctatatagtgtccctattatcatctgtcacttcccagagagggcaaacattcaactttaccagctgataagaggccccaccgcatgttgttctggtgaagctcaggtgttttgagagtggggtatgtatgtaagacaggacttgaaggtcagggagaagatgatacccggacactagataactctggaaaactagaagaaattaataacatgttgcacacctcaccagaactggaaggagt----ctgtgttcttatggggtgctcggactggcaggggagagttcagccccagctaagaaaagcctaatattaagaggcacttgcattagaagggtaatcaattatgtgccatccctattttgtcttttcctccatcaaacatatagaagcccattttc--actttttatcttgaccaagtatcagagaagcctgtatgtaaagtatttcctcccatttagtttcttagtttctcttctataaaacaaattaagCTG----CAAAAAAAGGGG-----------G------------AGGGGAATGGGAAGGCTGTAACTTGTATGTTGTAATGTATTGGTCCATTTTC-------------- i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 27052 1319 + 108555830 aggggctgcctctgaagtagtggagagcacaaggctacagctagaagctgggcctcttgggagatttgctttattttatgttttctctgccctattcctgtgatggaaaactgcaaaatccaagtctaaagtctgatccatgggagtctggaaggctaaggctgcttttggtggtttcctgcagatatca----gaagcagactgagctataaaataaactcctagcaatgcctgtcccttcttggagtcagggtcagtgttagtgtatttcctcaaactctaaattatccacccttgtaataaggctaggttttcatcttttccctgagtaattttcc-------agactttataaaaattaaaaagcattatcacac---ttttttttattccttcaagaagtcaaatgatcataattttt----------------tctctagatatcccactttcttcctaattcatttctcttttctagattctagttctcttttgggtcccagtcaggcactgctgtgcctcctacttgataggtgtcatgtccctgattgcaggttgccaccctattagcatgtgttctagccactcccataatacactgcttttctaccatgcagcaggcgaacgtatatatatgcaaatcttgcctggtcagattatacatcaaagttagcctcttaaa------------tttgtctacgaattttcctggaacctctgaaaactgttttagtctttccttgcatatggctaattcggacatagaaaggggtacatatacctacatagtatccctattatcatctgtcacttcccagagagggcaaacattcaactttgccagctgataagaggccccactgcatgttgttctggtgaagctcggatgtttcgagagtggggtatgtatgtaagccaggactcgaagggcagggagaagATGAAGACTGGACACTAGATAACCCTGGAAAACTAGAAGAAATTAATAACATGTTGCATACCTCACCAGAACTGGAAGAAGTCTGACTGTGTTCTTAAGGGGTGCTCAGACTGGCAGGGGAGAGTTCAGCCCCAGCTAAGAAAAGCCTAATATTAagaggcacttgcattaaaagggtaatcaattatgtgccatccctattttgtcttttcctccatcaaacatatagaagcccatttta--attttttatcctgaccaagcatcagagaagcctgtatataatgtatttcctcccat--------ttagtttctcttctataaaacaagttaagCTG----CAAAAAAAGGAGTCAGACTGAACA------------TGGGAAATGGGAAGGTTGTAACTTGTATGTTGTAATGTATGAGTCCATTTTCACactga------- i chlSab2.chr12 C 0 I 7 s manLeu1.NW_012101680v1 7967 1308 + 85016 aggggccgcctctgaagtggtggagagcacaaggctgcagctagaagctgggcctcttgggagatttgctttattttatgttttctctgccctattcctgtgatggaaaactgcagaatccaagtctaaaatctgatccacgggagtctggaaggctaaggctgcttttggcggcttcctgcagatatca----gaagcagactgggctataaaataaactcctagcaatgcctgtcccttcttggagtcaggatcagtgttagtgtattccctcaaagcctatattatccacccttgtaataaggctaggttttcatcttctccctgagtaattttcc-------agactttgtaaaaatcaaaaagctttatcacac---tttttttgattccttcaaggagtcaaatgatcataattttt----------------tctctctatatcccactttcttcccaattcatttctcttttctagattctagttctcttttgggtcctagtcaggcactgctgtgcctcctacttgataggtgtcaggtccctggttgcaggctgccaccctgttagcaggtgctctagccactcccataatacactgcttttctaccacgcagcaggtaaacacaaatatatgcaaatcttgcctggtcagatcatacatcaaggttagcctttcaaa------------tttgtctacaaattttcctggaacctctgaaagctgttttagtttttccttgcatatggctaactcagacacagaaaggggtccatatacctatatagtgtccctattatcatctgtcacttcccagagagggcaaacattcaactttaccagctgataagaggccccaccgcatgttgttctggtgaagctcaggtgttttgagagtggggtatgtatgtaagacaggacttgaaggtcagggagaagatgatgcccggacactagataactctggaaaactagaagaaattaataacatgttgcacacctcaccagaactggaaggagt----ctgtgttcttatggggtgctcggactggcaggggagagttcagcctcagctaagaaaagcctaatattaagaggcacttgcattagaagggtaatcaattatgtgccatccctattttgtcttttcctccatcaaacatatagaagcccattttc--actttttatcttgaccaagtatcagagaagcctgtatgtaaagtatttcctcccatttcgtttcttagtttctcttctataaaacaaattaagCTG----CAAAAAAAGGGG-----------G------------AGGGGAATGGGAAGGCTGTAACTTGTATGTTGTAATGTATTGGTCCATTTTCACA----------- i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 28441 1293 + 20575453 cggggctgcctctgaagtggtggagagcacaaggctgcagctagaagctgggcctcttgggagatttgcttta-----tgttctctctgccctgttcctgt------------ctaaatccaagtctaaaagctaatccatgggagtctggaagcctaaggctgcttttggcagcttcctgctgatatca----gaagcagactgggctataaaataaactcctagcaatgcctgtcccttcttggagtcagggtcagtgttagtgtatttcctcaaagcctaaattatccgcccttgtaataaggctaggttttcatcttttccctgagtaattttcc-------agactttataaaaattgaaaaactttatcacac----tttttttatttcttcaaggagtcaaatgatcataattttt----------------tctctctatatcccactttcttcctaattcatttctcttttctagattctagttctcttttgggtcctagtcaggcactgctgtgcctcctacttgataggtgtcatatccctggttgcaggttgccagcctattagcaggtgttctaaccactcccataatacactgcttttctaccacacagcaggtgaatgtacatatatgcaaatcttgcctggtcagatcatgcatcaaggttagcctcttaaa------------tttgtctatgaattttcctggaacctctgaaaactgttttagtttttccttgcatatggctaattcagacatagaaaggggtccatatacctatatagtgtccctattatcatctgtcacttcccagggagggcaaacatccaactttgccagctgataagaggccccaccgcatgttgttctggtgaagctcgggtgtttcgagagcggggtatgtatgtaagacaggactcgaagggcagggagaagatgatgactggatactagaaaaccctggaaaactagaagaaattaataacatggtgcacacctcaccagaactggaaggagt----ctgtgttcttatggcatgcttggactggcaggggagagttcagtcccaggtaagacaagtctaatattaagaggcacttgcattaaaagggtaataaattatgtgccatccctattttgtgttttcctccatcaaacacatagaagttcatttta--attttttatcctgaccaagcatcagagaagcctgtatgtaaagtatttcctcccat--------ttagtttctcttctatcaaacaaattaagCTG----CAAAAAAATGAATCAGACCCAACA------------GGGGAAATGGGGAGGCTGTAACTTGTATATTGTAAtgtattagtccattttcaca----------- i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 31895 1313 - 117903854 agaagctggctctgaagtg-tagagggcacaaggctgcagctagaagctgtgccttttgggaggtttgcattatt-----ttttctctgccctatttctgtgattgaaaattgtaaaagccaagtctaaaagctgattcatgggagtgtggaggcctaaggctacttttcgtggcttcctgcagataccaaaggaaactagacggggttataaagtgaactcctagcaatgcctgttccttcttgcagtcaggggcagtgttagtgtatttcttcaaagtctaaattatctacgcttttaataaggctaggttttta-ccttttcctgggtaattttcctgactttata-------gaactcaaaaagctttgtcac-----atttttttattctttcagggaattgaatgatcataattttt----------------tctctatatatcctgctttcttcctaatttatttctcttttttaggtcctaattcttttttgggtcctggtcaggcactactgtgcctcctactcaacaggcat-atgttcctggttgcaggctgcca-cctattaggatgtagtttagccactcccataatgcgctgcttttctgccatgcagtaggtagacacgaatatatgcaaatcttgcctggtcaaattatacatcaaagttagcctctttacattttccaggatcctgtctatacattttcctggatcctctgaaaactgttc-gtttttttcttacatacagctaattcagacatagaaaagggtacatatatttatatagtgtccccatgatcatctgctacttcccaaagagggcaaagattcaactttgccagcggataagaggccctactgcaagttgttctggtgaggctcaggtctttcaagagtg--gtatgtatgtaaaataggacttgaaaggcaggaagaagatgatgactggacactagatagccttggaaaactaaaaggaattaataacatcttacacacctcaccagaactggaagaagtctgactgtgttattatagggtgcttggacttgcagaataaagttcagcctcagctaagaaaaacctaatactaagaggcacttgcattaaaga--taatcagttatgtccagtccctgttctgccttttcctgcatcaaacatatacaagcccc-tttgctgttttttatcct----aagcatcagagaagcctgtatataatgtatttcctcccct--------ttagtttatcttctataaaacaaattaagctgaaAAAAAAAAAAGGAGTCAGACCAAACA------------GGAGACATGGGAAGGTTGTAATTTGTATATTGTAATACATTAGTCCAGTTTC-------------- i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107942v1 64988 1301 - 883013 agaagctggctctgaagtgatagagggcacaaggctgcagctagaagctgtgccttttgggaggtttgctttatt-----ttttctctgccctatttctgtgattgaaaactgcaaaagccaagtctgaaagctgattcatgggagtctggaggcctaaggctacttttcgtggcttcctgcagatat------aaagcagactggcttataaaatgaactcctagcaatgcctgttccttcttgcagtcaggggcagtgttagtgtataacttcaaagtctaaattatctacccttttaataaggctaggtttttatctttttcctgagtaattttcctgactttata-------aaactcaaaaagctttgtcaca----atttttttattctttcaaggagttgaatgatcataattttt----------------tctatatatatcctgctttcttcctaatttatttctcttttttagttcctaattattttttgggtcctggtcaggcactactgtgcctcctacttgacaggtgtcatgttcctggttgcaggctacca-cctattagcatgtactttagccactcccataatgcagtgcttttctaccatgcagcaggtagacatgaacatatgcaaatcttgcttggtcaaattatacatcaaagttagcctcttaac-----------tattgtctatacattttcctggatcctctgaaaactgttcaagattttttttacatatggctaattcaggcatagaaaagggtacatatatttatatagtgtccccatgatcatctgctacttcccaaagagggcaaagattcaactttgccagctgataagaggccgtactgcacgttgttctggtgaggctcgggtctttcaagagtgt-gtatatatgtaagataggactcgaaaggcaggaagATGATGATGACTGGACACTAGATAGCCCTGGAAAACTAGAAGGAATTAATAACATGTTGCACACCTCACCAGAACTGGAAGAAGTCTGACTGTGTTATTACAGGGTGCTTGGACTTGCAGAGGAAAGTTCAGCCTCAGCTGAGAAAAACCTAACATTAAGAGGCACTTGCATTAAAGA-GTACTCAGTTATGCCCAGTCCCTGTTTTGTCTTTTCCTGCATCAAACATATACAAGCCCCTTTTTCCGATTTTTATCCT----AAGCATCAGAGAAGCCTGTATATAATGTATTTCCTCTCCT--------TTAGTTTATCTTCTATAAAACAAATTAAGCTG---AAAAAAAAAGGAGTCAGACCAAACA------------GGAGAAATGGGAAGGTTGTAATTTGTATATTGTAATACATTAGTCCATTTTC-------------- i cebCap1.NW_016107942v1 C 0 C 0 e saiBol1.JH378277 96910 4752 + 3265726 I e nomLeu3.chr21 44665873 6335 + 86207423 I a score=31159.000000 s hg38.chr3_KI270784v1_alt 117251 23 + 184404 ACTATGCTATGACAAAACTGCTA s panTro5.chr3 13127 23 - 202621043 ACTATGCTATGACAAAACTGCTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 8043 23 - 205426864 ACTATGCTATGACAAAACTGCTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 26606 23 + 508821 ACTATGCTATGACAAAACTGCTA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr2 64037 9 - 204787373 --------------acactgcta i rheMac8.chr2 C 0 C 0 s macFas5.chr6 12638 9 - 181584905 --------------ACACTGCTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 121588 9 - 5309094 --------------ACACTGCTA i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012005170v1 8899 9 + 97742 --------------ACACTGCTA i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 9275 6 + 85016 -----------------CTGCTA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 29734 6 + 20575453 -----------------ctgcta i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 33208 9 - 117903854 --------------ACACTGCTA i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107942v1 66289 9 - 883013 --------------ATACCGCTA i cebCap1.NW_016107942v1 C 0 C 0 e saiBol1.JH378277 96910 4752 + 3265726 I e chlSab2.chr12 28371 7 + 108555830 I e nomLeu3.chr21 44665873 6335 + 86207423 I a score=701924.000000 s hg38.chr3_KI270784v1_alt 117274 124 + 184404 TGACAAAACTGACAAAACT-------CTTTCGGG--AAAAAAGTGACATGCTGGGTTTAGAAAGTAGGGTCCAGCTGCCCTATACCAGCTCATC-AAAGATGGCCTTATGGTTAAGAAATGAGAGAAAACTGTT s panTro5.chr3 13150 124 - 202621043 TGACAAAACTGACAAAACT-------CTTTCGGG--AAAAAAGTGACATGCTGGGTTTAGAAAGTAGGGTCCAGCTGCCCTATACCAGCTCATC-AAAGATGGCCTTATGGTTAAGAAATGAGAGAAAACTGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 8066 124 - 205426864 TGACAAAACTGACAAAACT-------CTTTCGGG--AAAAAAGTGACATGCTGGGTTTAGAAAGTAGGGTCCAGCTGCCCTATACCAGCTCATC-AAAGATGGCCTTATGGTTAAGAAATGAGAGAAAACTGTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 26629 124 + 508821 TGACAAAACTGACAAAACT-------CTTTCAGG--AAAAAAGTGACATGCTGGGTTTAGAAAATAGGGTCCAGCTGCCCTATACTAGCTCATC-AAAGATGGCCTTATGGTTAAGAAATGAGAGAAAACTGTT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr2 64046 115 - 204787373 ---------cgacaaaaCT-------CTCTCAGG--AAAAAAATGACGTGCTGGGTTTAGAAAGTAGGGTCCAGCTGCCCTATACCAGCTCATC-AAAGATGACCTTATGGTTAAGAAATGACAGAAAACTGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr6 12647 115 - 181584905 ---------CGACAAAACT-------CTCTCAGG--AAAAAAGTGACGTGCTGGGTTTAGAAAGTAGGGTCCAGCTGCCCTATACCAGCTCATC-AAAGATGACCTTATGGTTAAGAAATGAGAGAAAACTGTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 121597 124 - 5309094 TGACAAAACTGACAAAACT-------CTTTCAGG--GAAAAAGTGACATGCTGGGTTTAGAAAGAAGAGTCCAGCTGCCCTATACCAGCTCATC-AAAGATGACCTTATGGTTAAGAAATGAGAGAAAACTGTT i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012005170v1 8908 115 + 97742 ---------CGACAAAACT-------CTCTCAGG--AAAAAACTGACGTGCTGAGTTTAGAAAGTAGGGTCCAGCTGCCCTATACCAGCTCATC-AAAGATGACCTTATGGTTAAGAAATGAGAGAAAACTGTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 28378 122 + 108555830 ---------tgacaaaactgacaaaactCTCTGG--AAAAAAGTGACATGCTGGGTTTAGAAAGTAGAGTCCAGCTGCCCTATACCAGCTCATC-AAAGATGACCTTATGGTTAAGAAATGAGAGAAAACTGTT i chlSab2.chr12 I 7 C 0 s manLeu1.NW_012101680v1 9281 115 + 85016 ---------CGACAAAACT-------CTCTCAGG--AAAAAACTGACGTGCTGGATTTAGAAAGTAGGGTCCAGCTTCCCTATACCAGCTCATC-AAAGATGACCTTATGGTTAAGAAATGAGAGAAAACTGTT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 29740 103 + 20575453 ---------tgacaaaact-------c-ctcagGAAAAAAAAGTGACATGTTGGGTTTAGAAAG-------------CCCATTACCAGCTCATC-AAAGATGACCTTATGGTTAAGAAATGAGAGAAAACTGTT i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 33217 116 - 117903854 TG---------ACAAAACT-------CTTTCAGG--GAAAAAGTGACATGCTGGGTTTAGAAAGTAGGGTCCAGCTGTCCTTTAACAGCCCATCAAAAGATGAGCTTCTGGTTAAGAAGTGAGGGAAAACTGCT i calJac3.chr13 C 0 I 184 s cebCap1.NW_016107942v1 66298 125 - 883013 TGACAAAACTAACAAAACT-------CTTTCAGG--GGAAAAGTGACATGCTGGGTTTAGAAAGTAGGGTCCAGCTGTCCTTTAACAGCCCATCAAAAGATGAGCTTCTGGTTAAGAAATGAGGGAAAACTGTT i cebCap1.NW_016107942v1 C 0 C 0 e saiBol1.JH378277 96910 4752 + 3265726 I e nomLeu3.chr21 44665873 6335 + 86207423 I a score=472870.000000 s hg38.chr3_KI270784v1_alt 117398 85 + 184404 AAGAAAAAGTCTCATGTTCTCCATCTTGAGGCTAACTGTTTGCAAAGGGTTGTCATAAAACAGGCTCTCACTAAACAGGCGTATC s panTro5.chr3 13274 81 - 202621043 AAGAAAAAGTCTCATGTTCTCCATCTTGAGGCT----GTTTGCAGAGGGTTGTCATAAAACAGGCTCTCACTAAACAGGCGTATC i panTro5.chr3 C 0 C 0 s panPan2.chr3 8190 81 - 205426864 AAGAAAAAGTCTCATGTTCTCCATCTTGAGGCT----GTTTGCAGAGGGTTGTCATAAAACAGGCTCTCACTAAACAGGCGTATC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 26753 85 + 508821 AAGAAAAAGTCTCATGTTCTCCATCTTGAGGCTAATTGTTTGCAGAGGGTTGTCATAAAACAGGCTCTCACTAAACAGGCGTATC i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr2 64161 84 - 204787373 AAGAAAAAGTCTCATATTCTCTATCTTGAGGCTAATTGTTTACAGGGG-TTGTCATAAAAGAGGCTGTCACTAAACAGGCAGATC i rheMac8.chr2 C 0 C 0 s macFas5.chr6 12762 81 - 181584905 AAGAAAAAGTCTCATATTCTCCATCTTGAGGCT----GTTTACAGGGGGTTGTCATAAAAGAGGCTGTCACTAAACAGGCAGATC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 121721 85 - 5309094 AAGAAAAAGTCTCATGTTCTCCATCTTGAGCCTAATCGTTTGCAGGGGTTTGTAATAAAAGAGCCTGTCACTAAACAGGCATATC i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012005170v1 9023 81 + 97742 AAGAAAAAGTCTCATATTCTCCATCTTGAGGCT----GTTTACAGGGGGTTGTCATAAAAGAGGCTGTCACTAAACAGGCAGATC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 28500 84 + 108555830 AAGAAAAAGTCTCATGTTCTCCATCTTGAGGCTAATTGTTTGCA-GAGGTTGTCATAAAAGAGGCTGTCACTAAACAGGCAGATC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 9396 81 + 85016 AAGAAAAAGTCTCATATTCTCCATCTTGAGGC----TGTTTACAGGGGGTTGTCATAAAAGAGGCTGTCACTAAACAGGCAGATC i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 29843 85 + 20575453 AAGAAAAGGTCTCATGTTCTCCATCTTGAGGCGAACTGTTTGCAGGGCATTGTCATCAAAGAGGCTGTCACTAAACAGGCATATC i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 33517 85 - 117903854 aagaaaaaGTCTCATGTTCTCCATCCTGAGGCTAATTGTTTGCAGGGGGTTGTGGTAAAAGAGGATGTGGCTAAAGAGGCATGTC i calJac3.chr13 I 184 C 0 s cebCap1.NW_016107942v1 66423 85 - 883013 AAGAAAAAGTCTCATGTTCTCCATCCTGAAGCTAATTGTTTGGAGGGGGTTGTCGTAAAAGAGGCTGTTGCTAAAGAGGCATGTC i cebCap1.NW_016107942v1 C 0 C 0 e saiBol1.JH378277 96910 4752 + 3265726 I e nomLeu3.chr21 44665873 6335 + 86207423 I a score=3348926.000000 s hg38.chr3_KI270784v1_alt 117483 443 + 184404 TGATCTTATCATGTAGGGCTGTTAAAT---ACATTTCAACTTCTAGTCATAATGATGGAGAGGTTACTGCTGATCTTTTCTGT------------------------CTAGGTTCCAAGACATCTCTTTTTTT--GTGTCACTTGGACCAGTGGCAAATTAAATAAGCAGTCAGCTAAAAGTCAGAGGATCACTGAGAAAAGTAAAAGCTAAACTGTTTGGGGCCTCTTTCCTGGGGCAGCCTCCAGGCTACTAGAAAACAGAGGCGGTGAGCAGAAAGGT---GACAAGATGCAGAGCACTCAGGTGAGGGACAGAGAGCACAAGGTGGACAGTCCAAAAAGAGAAAGTGGCAAACATCTTGTTTAGCCAAATCCATTCTTCTCAATATACCCCAGGGCCTCTAACCTTGTGAGCTTGGCCTCT-AATCTGAGTATGACACCCCCAGGTCTCTAAC---TTTGGGCTGAGTCTCTCAC s panTro5.chr3 13355 462 - 202621043 TGATCTTATCATGTAGGGCTGTTAAAT---ACATTTCAAATTCTAGTCATAATGATGGAGAGGTTACTGCTGATCTTTTCTGATAATTAAGAT-ACAA----AAATACTAGGTTCCAAGACATCTCTTTTTTT--GTGTCACTTGGACCAGTGGCAAATTAAATAAGCAGTCAGCTAAAAGTCAGAGGATCACTGAGAAAAGTAAAAGCTAAACTGTTTGGGGCCTCTTTTCTGGGGCAGCCTCCAGGCTACTAGAAAACAGAGGCGGTGAGCAGAAAGGT---GACAAGATGCAGAGCACTCAGGTGAGGGACAGAGAGCACAAGGTGGACAGTCCAAAAAGAGAAAGTGGCAAACATCTTGTTTAGCCAAATCCATTCTTCTCAATATACCCCAGGGCCTCTAACCTTGTGAGCTTGGCCTCT-AATCTGAGTATGACACCCCCAGGTCTCTAAC---TTTGGGCTGAGTCTCTCAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 8271 462 - 205426864 TGATCTTATCATGTAGGGCTGTTAAAT---ACATTTCAACTTCTAGTCATAATGATGGAGAGGTTACTGCTGATCTTTTCTGATAATTAAGAT-ACAA----AAATACTAGGTTCCAAGACATCTCTTTTTTT--GTGTCACTTGGACCAGTGGCAAATTAAATAAGCAGTCAGCTAAAAGTCAGAGGATCACTGAGAAAAGTAAAAGCTAAACTGTTTGGGGCCTCTTTCCTGGGGCAGCCTCCAGGCTACTAGAAAACAGAGGCGGTGAGCAGAAAGAT---GACAAGATGCAGAGCACTCAGGTGAGGGACAGAGCGCACAAGGTGGACAGTCCAAAAAGAGAAAGTGGCAAACATCTTGTTTAGCCAAATCCATTCTTCTCAATATACCCCAGGGCCTCTAACCCTGTGGGCTTGGCCTCT-AATCTGAGTATGACACCCCCAGGTCTCTAAC---TTTGGGCTGAGTCTCTCAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 26838 462 + 508821 TGATCTTATCATGTAGGGCTGTTAAAT---ACATTTCAACTTTTAGTCATAATGATGGAGAGGTTACTGCTGATCTTTTCTGATAATTAAGAT-ACAA----AAATACTAGGTTCCAAGACATCTCTTTTTTT--GTGTCACTTGGACCAGTGGCAAATTAAATAAGCAGTCAGCTAAAAGTCAGAGGATCACTGAGAAAAGTAAAAGCTAAACTGTTTGGGGCCTCTTTCCTGGGGCAGCCTCCAGGCTACTACAAAACAGAGGAGGTGAGCAGAAAGGT---GACAAGATGCAGAGCACTCAGGTGAGGGACAGAGAGCACAAGGTGGACAGTCCAAAAAGAGAAAGTGGCAAACATCTTGTTTAGCCAAATCCATTCTTCTCAATATACCCCAGGGCCTCTAACCTTGTGAGCTTGGCCTCT-AATCTGAGTATGACACCCCCAGGTCTCTAAC---TTTGGGTTGAGTCTCTCAC i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr2 64245 467 - 204787373 TGATCTTATCATGTAGGGCTGTGAAATGCCACATTTCAACTTCTAGTCATAATGATGGAGAGGTTATTGCTGATCGTTTCTGATAATTAAGGT-ACAA----AAATACTAGGTTCCGAGACATCCCTTTTTTTCAGTGTCACTTGGACCAGTGGCAAGTTAAATAAGCAATCAGCTAAAAGTCAGAGGATCCTTGAGGAAAGTAAAAGCTAAACTGTTTGGGGCCTCCTTCCTGTGGCAGTCTCCAGGCTGCTACAAAACAGAGGCGGTGAGCAGAAAGGT---GACAAGATGCAGAGCACTCAGGTGAGGGACAGAGAGCACAAGGTGGACAGTCCAAAAAGAGAACTTGGCAAACATCTTCTTTAGCCAAATCCATTCTTTTCAATATACCCCAGGGCCCCTAACCTTGTGAGCTTGGCCTCT-AATCTGAGTATGACACCCCCAGGTCTCTAAC---TTTGGGCTGAGTCTCTCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr6 12843 467 - 181584905 TGATCCTATCATGCAGGGCTGTGAAATGCCACATTTCAACTCCTAGTCATAATGATGGAGAGGTTATTGCTGATCGTTTCTGATAATTAAGGT-ACAA----AAATACTAGATTCCGAGACATCCCTTTTTTTCAGTGTCACTTGGACCAGTGGCAAATTAAATAAGCAATCAGCTAAAAGTCAGAGGATCCTTGAGGAAAGTAAAAGCTAAACTGTTTGGGGCCTCTTTCCTGGGGCAGCCTCCGGGCTACTACAAAACAGAGGCGGTGAGCAGAAAGGT---GACAAGATGCAGAGCACTCAGGTGAGGGACAGAGAGCACAAGGTGGACAGTCCAAAAAGAGAACTTGGCAAACATCTTCTTTAGCCAAATCCATTCTTCTCAGTATACCCCAGGGCCCCTAACCTTGTGAGCTTGGCCTCT-AATCTGAGTATGACACCCCCAGGTCTCTAAC---TTTGGGCTGAGTCTCTCAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 121806 469 - 5309094 TGAACTTATCATGTAGGGCTGTTAAATACCACATTTCAACTTCTAGTCATAATGATGGAGAGGTTATTGTTGATTTTTTCTGATAACTAAGGT-ACAA----AAATACTAGGTTCCCAGACATCTGTTTTTTTCAGTGTCACTTGGAGCAGTGGCAAATTAAATAAGCAATCAGCTAAAAGTTAGAGGATCGTTGAGGAAAGTAAAAGCTAAACTGTTTGGGTCCTCTTTCCTGGGGCAGCCTATAGGCTACCATAAAACAGAGGTGGTGAGCAGAAAGGT---GACAAGAGGCAGAGCACTCAGGTGAGGGACAGAGAGCACAAGGTGGACAGTCCAAAAAGAGAAAGTGGCAAACATCTTGTTTAGCCAAACTCATTCTTCTCAATGTACCCCAGGGCATCTAACCTTGGGATCTTGGCCTCT-AATCTGAGTATGACACCCCCAGCTCTCTAAC-TTTTTGGGCTGAGTCTCTCAC i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012005170v1 9104 467 + 97742 TGATCCTATCGTGTAGGGCTGTGAAATGCCACATTTCAACTCCTAGTCATAATGATGGAGAGGTTATTGCTGATCGTTTCTGATAATTAAGGT-ACAA----AAATACTAGATTCTGAGACATCCCTTTTTTTCAGTGTCACTTGGACCAGTGGCAAATTAAATAAGCAATCAGCTAAAAGTCAGAGGATCCTTGAGGAAAGTAAAAGCTAAACTGTTTGGGGCCTCTTTCCTGGGGCAGCCTCTGGGCTACTACAAAACAGAGGCGGTGAGCAGAAAGGT---GACAAGATGCAGAGCACTCAGGTGAGGGACAGAGAGCACAAGGTGGACAGTCCAAAAAGAGAACTTGGCAAACATCTTCTTTAGCCAAATCCATTCTTCTCAGTATACCCCAGGGCCCCTAACCTTGTGAGCTTGGCCTCT-AATCTGAGTATGACACCCCCAGGTCTCTAAC---TTTGGGCTGAGTCTCTCAC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 28584 467 + 108555830 TGATCCTATCATGTAGGGCTGTGAAATGCCACATTTCAACTTCTAGTCATAATGATGGAGAGGTTATTGCTGATCTTTTCTGATAATTAAGGT-ACAA----AAATACTAGGTTCCAAGACATCTCTTTTTTTCAGTGTCACTTGGACCAGTGGCAAATTAAATAAACAATCAGCTAAAAGTCAGAGGATCATTGAGGAAAGTAAAAGCTAAACTGTTTGGGACCTCTTTCCTGGGGCAGCCTCCAGGCTACTACAAAACAGAATCGGTGAGCAGAAAGGT---GACAAGATGCAGAGCACTCAGGTGAGGGACAAAGAGCACAAGGTGGACAGTCCCAAAAGAGAAAGTGGCAAACATCTTCTTTAGCCAAATCCATTCTTCTCAATATACCCCAGGGCCCCTAACCTTGTGAGTTTGGCCTCT-AATCTGAGTGTGACACCCCCAGGTCTCTAAC---TTTGGGCTGAGTCTCTCAT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 9477 467 + 85016 TGATCCTATCGTGTAGGGCTGTGAAATGCCACATTTCAACTCCTAGTCATAATGATGGAGAGGTTATTGCTGATCGTTTCTGATAATTAAGGT-ACAA----AAATACTAGATTCCGAGACATCCCTTTTTTTCAGTGTCACTTGGACCAGTGGCAAATTAAATAAGCAATCAGCTAAAAGTCAGAGGATCCTTGAGGAAAGTAAAAGCTAAACTGTTTGGGACCTCCTTCCTGGGGCAGCCTCCAGGCTACTACAAAACAGAGGCGGTGAGCAGAAAGGT---GACAAGATGCAGAGCACTCAGGTGAGGGACAGAGAGCACAAGGTGGACAGTCCAAAAAGAGAACTTGGCAAACATCTTCTTTAGCCAAATCCATTCTTCTCAGTATACCCCAGGGCCCCTAACCTTGTGAGCTTGGCCTCT-AATCTGAGTATGACACCCCCAGGTCTCTAAC---TTTGGGCTGAGTCTCTCAC i manLeu1.NW_012101680v1 C 0 I 4050 s colAng1.NW_012114821v1 29928 465 + 20575453 TGATCCTATCATGTAGGGTTGTTAAATACCACATTTCAACTTCTAGTTACAATGATGGAAAGGTTAACACTGATCTTTTCTGATAACTAAGGTAAAAA----AAATACTAGGTTCTAAGACATCTCTTGTTTTCAGTGTCACTTGGACAAGTGGCAAATTAAATAAGCAATCAGCTAAAAGTCAGAGGATCATTGAGGAAACTAAAAGCTAAACTGTTTGGGGCCTCTTTCCTGGGGCAGCCTCCAGGCTACTACAAAACAG--TCAGTGAGCAGAAAGGTAACAACAAGATGCAGAGCACTCAGATGAGGGACAAAGAGCACAAGGTGGACAGTCCCAAAAGAGAAAGTGGCAAACATCTTCTTTAGCCAAATCCATTCTTTTCAATATACCCCAGGGCCTCTAACCTTGTGAACTTGGCCTCT-AATCTGAGTATGACACCCCCAAGTCTCTAAC---TTTGGGCTGAGTCAC---- i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 33602 464 - 117903854 TGTTTTTGTCATGTGGGGCTGTTAAAT---ACATTTCAACTTCTAATCATAATGATGGAGAGGCTTTTGCTGATCTTTTCTGCTAATCGAGGT-ACAA----AAATACTAAGTTCCAAGACATCTCTTTTTTCCAGTGTCACTTGGACCAGTGGCAAATTAAACAAGCAGTCAGCTAAAAGTCAGAAAATTGTTAAGGAAAGTAAAAGCTAAACTGTTTGAGGCCTCCTGCCTGCGGTAGCCTCCAGGCTGCTACAGAACACAGGCAGTGAGCAGAAAGGT---GACAAGATACAGAGCACTCAGGTGAGGGACAGGGAGCACAAGGTGGGCAGTTCAAAAACAGAAAGTCGCAAACATCTTGTTTAGCAAAATCTATTCTTCTCAATATACCCCAGGGCCTCTATCCCTGTGAGCTTGGCCTCC-AATCTGAGTATGACACCCCCGGGCCTCTGAC---TTGGGGCTGAGTCTCTCAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 101662 472 + 3265726 GATCTTTTTCATGTGAGGCTGTTAAAT---AAATTTCAACTTCTAATTATAATGATGGAGAGGTTATTGCTGATGTTTTCTGATAATCAAGGT-TAAAAAGGAAATACTAGGTTCCAAGACATCTCTTTTTTAAAGTGTCACTTGGATCAGTGGCAAATTAAACAAGCAATCAGCTAAAAGTCAGAAAATCATTGAGGAAAGTAAAAGCTAAATTGCTTGAGGTCTGCTTCCTGTGGTAGCCTCCAGGCTGCTACAAAACAGAGGCAGTGAGCAGAAAGGT---GACAAGATGCAGAGCCTTCAGGTGAAGGACAGAGAGTACAAGGTAGGCAGTTCAAAAAGAGAAAGTGGCAAACATCTTGTTTAGCAAAATCCATTCTTTTCAATATACCCCAGGGCTTCTAACTCTGTGAGCTTGGCCTCTAAATCTGAGTATGACACCCCAAGCCCTTTAACTTTTTGGGGCTGAGTCTCTCAC i saiBol1.JH378277 I 4752 C 0 s cebCap1.NW_016107942v1 66508 465 - 883013 TGTTTTTGTCACGTGAGGCTGTTAAAT---ACATTTCAACTTCTAATCATAATGATGGAGAGGTTTTTGCTCATCTTTTCTGCTAATCGAAGT-ACAA----AAATACTAGGCTCCAAGACATCTCTTTTTTCCAGTGTCACTTGGACCAGTGGCAAATTAAACAAGCAGTCAGCTAAAAGTCAGAAAATTGTTAAGGAAAGTAAAAGCTAAACTGCTTGAGGCCTCCTTCCTGTGGTAGCCTCCAGGCTGCTACAGAACAGAGGCAGTGAGCAGAAAGGT---GACAAGATGCAGAGCACTCAGGTGAGGGACAGGGAGCAC-AGGTGGGTAGTCCAAAAAGAGAAAGTGGCAAACATCTTGTTTAGCAAAATCCATTTTTCTCAATATACCCCAGGGCCTCTATCCCTGTGAGCATGGCCTCC-AATCTGAGTATGACACCCCCAGGCCTCTGAC-TTTTGGGGCTGAGTGTCTCAC i cebCap1.NW_016107942v1 C 0 C 0 e nomLeu3.chr21 44665873 6335 + 86207423 I a score=2456227.000000 s hg38.chr3_KI270784v1_alt 117926 393 + 184404 CCTAACATTATACCCTAGGGCCTCTCACTTAA-GTAATAGTGGATAATCATTCTTGCCCACCTGAATGGCTTCACGACTCTAAAAGACAGCCC-ACTTGC-------CAGCTGATTGATTCTGTGTGGACTGTTTTCCTTGGAGT--GGGGGTCTTGTCTTGGTGTCCCTTCATGGCATTGCTGAAAGAtgttgctggaaaagagggtcctgatacagaccacaaagtaggattcttagatcttgtgcaggaagaaatttgaggt-----------------gaaagaagcaagtttattagaaatgactccattacggagttggaca-----tcctcagaaaacaagagcaggaatgcattgtctttTGTTAGTGTCTGTACTTATAAGTAACTATAAAGAGAAAGAGTTATAATTAAACTTGGA s panTro5.chr3 13817 394 - 202621043 CCTAACATTATACCCTAGGGCCTCTCACTTAACGTAATGGTGGATAATCATTCTTGCCCACCTGAATGGCTTCACGACTCTAAAAGACAGCCC-ACTTGC-------CAGCTGATTGATTCTGTGTGGACTGTTTTCCTTGGAGT--GGGGGTCTTGTCTTGGTGTCCCTTCATGGCATTGCTGAAAGAtgttgctggaaaagagggtcctgatacagatcacaaagtaggattcttagatcttgtgcaggaagaaatttgaggt-----------------gaaagaagcaagtttattagaaatgactccattacggagttggaca-----tcctcagaaaacaagagcaggaatgcattgtctttTGTTAGTGTCTGTACTTATAAGTAACTATAAAGAGAAAGAGTTATAATTAAACTTGGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 8733 394 - 205426864 CCTAACATTATACCCTAGGGTCTCTCACTTAACGTAATGGTGGATAATCATTCTTGCCCACCTGAATGGCTTCACAACTCTAAAAGACAGCCC-ACTTGC-------CAGCTGATTGATTCTGTGTGGACTGTTTTCCTTGGAGT--GGGGGTCTTGTCTTGGTGTCCCTTCATGGCATTGCTGAAAGAtgttgctggaaaagagggtcctgatacagatcacaaagtaggattcttagatcttgtgcaggaagaaatttgaggt-----------------gaaagaagcaagtttattagaaatgactccattacggagttggaca-----tcctcagaaaacaagagcaggaatgcattgtctttTGTTAGTGTCTGTACTTATAAGTAACTATAAAGAGAAAGAGTTATAATTAAACTTGGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 27300 393 + 508821 CCTAACATTATACCCTAGGGCCTCTCACTTAA-GTAATAGTGGATAATCATTCTTGCCCACCTGAATGGCTTCGCGATTCTAAAAGACAGCCC-ACTTGC-------CAGCTGATTGATTCTGTGCGGACTGTTTTCCTTGGAGT--GGGGGTCTTGTCTTGGTGTCCCTTCATGGCATTGCTGAAAGAtgttgctggaaaagagggtcctgatacagaccacaaagtaggattcttagatcttgtgcaggaagaaatttgaggt-----------------gaaagaagcaagtttattagaaatgagtccattacggagttggaca-----tcctcagaaaacaagagcaggaatgcattgtctttTGTTAGTGTCTGTACTTATAAGTAACTATAAAGAGAAAGAGTTATAATTAAACTTGGA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr2 64712 410 - 204787373 CCTAACTTTATACCCTAGGGCCTCTCACTTAA-GTAATAGTGGATAATCGTTCTTGCCCACCTGAATGGCTTCATGACTCCAAAAGATGGCCC-ACTTGC-------CAGCTGATTGATTCTGTGTGGATTGTTTTCCTTGGAGT--GGGGGTCTTGTCTTGGTGTCCCTTCATGGTGTTGCTGAAAGAtgttgctggaaaagaggctcgtgatacaaatcacaaagtaggattcttagatcttgtgcaggaaaaaatttgaggtgagtcagagagcacagtgaaggaagcaagtttattagaaatgactccattacagagttggata-----tcctcaaaaaacaagagcaggaatgcattgtctttTGTTAGTGTCTCCACTCATAAGTAACTATAAAAAGAAAGAGCTATAATTAAACTTGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr6 13310 410 - 181584905 CCTAACTTTATGCCCTAGGGCCTCTCACTGAA-GTAATAGTGGATAATCGTTCTTGCCCACCTGAATGGCTTCACGACTCCAAAAGACGGCCC-ACTTGC-------CAGCCGATTGATTCTGTGTGGATTGTTTTCCTTGGAGT--GGGGGTCTTGTCTTGGTGTCCCTTCATGGTGTTGCCGAAAGAtgttgctggaaaagagggtcctgatacaaatcacaaagtaggattcttagatcttatgcaggacaaaatttgaggtgagtcagagagcacagtgaaggaagcaagtttattagaaatgactccattacagagttggaca-----tcctcagaaaacaagagcaggaatgcattgtctttTGTTAGTGTCTCCACTTATAAGTAACTATAAAGAGAAAGAGTTACAATTAAACTTGAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 122275 407 - 5309094 CCTAACATTATGCCCTAGGGCCTCTCACTTAA-GTAATAGTGGATAATCATTCTTGCCCACCTGAATGGCTTCACGACTCTAAAAGGCGACCC-ACTTGC-------CAGCTGATTGCTTCTATGTGGATTGTTTTCCTTGGAGT--GGGGGTCTGGTCTTGGTGTCCCTCCATGGTGTCACTGAAAAGtgttgctagaaa--aggatcctgatacagaccacaaagtagga-tattagatctcgtgcaggaaaaaatttgaggtgagtcagagagcacagtgaaagaaacaagtttcttagaaatgactccattacagagttggaca-----ccctcagaaaacaagagcaggaatgcattgtcttctgttAGTGCCTCTACTTATAAGTAACTACAAAGAGAAAGAGTTATAATGAAACGTGGA i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012005170v1 9571 410 + 97742 CCTAACCTTATACCCTAGGGCCTCTCACTGAA-GTAATAGTGGATAATCGTTCTTGCCCACCTGAATGGCTTCACGACTCCAAAAGACGGCCC-ACTTGC-------CAGCCGATTGATTCTGTGTGGATTGTTTTCCTTGGAGT--GGGGGTCTTGTCTTGGTGTCCCTTCATGGTGTTGCTGAAAGAtgttgctggaaaagagggtcgtgatacaaatcacaaagtaggattcttagatcttgtgcaggaaaaaatttgaggtgagtcagagagcacagtgaaggaagcaagtttattagaaatgactccattacagagttggata-----tcctcagaaaacaagagcaggaatgcgttgtctttTGTTAGTGTCTCCACTTATAAGTAACTATAAAGAGAAAGAGCTATAATTAAACTTGAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 29051 411 + 108555830 ACTAATATTATACCCTAGGGCCTCTGACTTAA-GCAATAGTGGATAATCATTCTTGCCCACCTGAATGGCTTCACGACTCCAAAAGACAGCCCAACCTGC-------CAGCTGACTGATTCTGTGTGGATTGTTTTCCTTGGAGT--GGGGGTCTTGTCTTGGTGTCCCTTCACGGTGTTGCTGAATGAtgttgctggaaaagagggtcctgatacagaccacaaagtaggattcttggatcttgtgcaggaaaaaatttgaggtgagtcagagactacagtgaaggaagcaagtttattagaaattactccattacagagttggaca-----tcctcagaaaacaggggcaggaatgcattgtctttTGTTAGTGTCTCTACTTATAACTAACTATAAAGAGAAAGAGTTACAATTAAATTTGGA i chlSab2.chr12 C 0 C 0 s colAng1.NW_012114821v1 30393 410 + 20575453 TCTAATATTATACCCTAGGGCCTCTCACTTAA-GTAATAGTGGATAAGCGTTCTTGCCCACCTGAATGGCTTCACGATTCTAAAAGATGACCC-ACTTGC-------CAGCTGATTGATTCTGTGTGGCTTGTTTTCCTTGGAGT--GGGGGTCTTGCCTTGGTGTCCCTTCATGGTGTTGCTGAAAGAtattcctggaaaaaagggtcctgatacagaccacaaagtgggattcttagattttgtgcaggaaaaaatttgaggtgagtcagagaacacagcgaaggaagcaagtttattagaaattactctattacagagttggaca-----tcctgagaaaacaagagcaggaatgcattgtctttTGTTAGTGTCTCCACTTATAAGTAATTACAAAGAGAAAGAGTTACAATTAAACTTGGA i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 34066 417 - 117903854 CCTAACATTATACCATAGGGCCTCACACTTAA-GTGATAGTGGATAATTATTCTTACCCACCAGAATGGCTTTATGACTCTAAAAGATGCCCC-ACTTGCCTGATGTTAGCTGATTGATTCTGTGTGAATTGTTTTTCTTGGAGT--GGGGGTCTTATCTTGGTGTCCCTTCATGGTGTTGCTGAAAGAtgttgatgaaaaagagggtcctgatacagaccacaaaggaggattcttagatcttgtgcaagaaaaaatttgaggtaagtcggagagcacagtacaaaaagcacatttattagaaatgactccattacatagttgggca-----tcctcagaaaacaagagcaggagtgcactgtctttCATTAGTGTCTCTACCTATAAGTAACTATAAAGAGAAAGAGTTATAGTTAAACTTGGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 102134 420 + 3265726 TCTAGCATTATACCGTAGGGCCTCCCACTTAA-GTGATAGTAGATAATCATTCTTACCCACCAGAATGGCTTTATGACTCTAAaagatacccc-acttgctcaatgtcagctgattaattctgtatggattgttttccttggagttggggggtcttaccttggtgtcctttcatgatgttgctgaaagatgttgctggaaaagagggtcctgatacagaccacaa---aggattcttagattgtgtgcaagaaaaaatttaaggtaagtcagagagcacagtgaaaaaagcaagtttattagcaatgactccagtacaaagttgggtcttgtttcatcagaagacaagagcaggAGTGCACTGTCTTTTGTTAGTCTCTCTGCTTACAGGCAACTATAAAGAGAAAGAGTTACAATTAAACTT-GA i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 66973 412 - 883013 CCTAACATTATACCATAGGGCCTCTCACTTAA-ATGACAGTGGATAATCATTCTTACCCACCAGAATGGCTTTATGACTCTAAAAGATGGCCC-ACTTGCTTGATGTCAGCTGATTGATTCTGTGTGGATTGTTTTCCTTGGAGT--GGGGGTCTTATCTTGGTGTCCCTTTACAGTGTTGCTGAAAGAtgttgctggaaaagagggtcctgatacagaccacaaaggaggattcttagatcttgtgcaggaaaaaatttgaggtaagtcagagagaacagtaaaaaaagcaagtttatttgaaatgactccattacataattgggca-----tcctcagaaaacaagagcaggag-----tgtctttcattagtgtttctACTTATAAGTAACTATAAAGAGAAAGAATTATAATTAAACTTGGA i cebCap1.NW_016107942v1 C 0 C 0 e manLeu1.NW_012101680v1 9944 4050 + 85016 I e nomLeu3.chr21 44665873 6335 + 86207423 I a score=170269.000000 s hg38.chr3_KI270784v1_alt 118319 25 + 184404 AGGTGC----------AGATGTACTCACTAAAGTC s panTro5.chr3 14211 25 - 202621043 AGGTGC----------AGATGTACTCACTGAAGTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 9127 25 - 205426864 AGGTGC----------AGATGTACTCACTAAAGTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 27693 25 + 508821 AGGTGC----------AGATGTACTCACTAAAGTC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44672208 25 + 86207423 AGGTGC----------AGATGTACTCACTAAAGTC i nomLeu3.chr21 I 6335 C 0 s rheMac8.chr2 65122 25 - 204787373 AGGTGC----------AGATTTACTCACTAAAGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr6 13720 25 - 181584905 AGGTGC----------AGATGTACTCACTAAAGTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 122682 25 - 5309094 AGGTTC----------AGATGTACTCACTAAAGTC i macNem1.NW_012018355v1 C 0 I 1 s cerAty1.NW_012005170v1 9981 25 + 97742 AGGTGC----------AGATGTACTCACTAAAGTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 29462 25 + 108555830 AGGTGC----------AGATATACTTACTGAAGTT i chlSab2.chr12 C 0 C 0 s colAng1.NW_012114821v1 30803 25 + 20575453 AGGTGC----------AGATGTACTCACTGAAGTC i colAng1.NW_012114821v1 C 0 I 279 s calJac3.chr13 34483 35 - 117903854 AAGTGCACTCCTTTAGAGATGTACTCACTAAAGGC i calJac3.chr13 C 0 I 1 s saiBol1.JH378277 102554 25 + 3265726 AAGTGC----------AGATGTACTCACTAAAGGC i saiBol1.JH378277 C 0 I 1 s cebCap1.NW_016107942v1 67385 28 - 883013 AAGTGCAGT-------AAATGTACTCACTAAAGGC i cebCap1.NW_016107942v1 C 0 I 1 e manLeu1.NW_012101680v1 9944 4050 + 85016 I a score=94687.000000 s hg38.chr3_KI270784v1_alt 118344 15 + 184404 GGGGCTATTGGTTTT s panTro5.chr3 14236 15 - 202621043 GGGGCTATTCGTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 9152 15 - 205426864 GGGGCTATTGGTTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 27718 8 + 508821 GGGGTTAT------- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44672233 15 + 86207423 GGGACTATTGGTTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 65147 15 - 204787373 GGGGCTATTGGTTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr6 13745 15 - 181584905 GGGGCTATTGGTTTT i macFas5.chr6 C 0 I 316 s macNem1.NW_012018355v1 122708 15 - 5309094 GGGGCTATTGGTTTT i macNem1.NW_012018355v1 I 1 C 0 s cerAty1.NW_012005170v1 10006 15 + 97742 GGAGCTATTGTTTTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 29487 15 + 108555830 GGGGCTATTGGTTTT i chlSab2.chr12 C 0 C 0 s colAng1.NW_012114821v1 31107 15 + 20575453 GGGGCTATTGGTTTT i colAng1.NW_012114821v1 I 279 C 0 s calJac3.chr13 34519 15 - 117903854 GGGGCCATTAGTTTT i calJac3.chr13 I 1 C 0 s saiBol1.JH378277 102580 15 + 3265726 GGTGCTACTGGTTTT i saiBol1.JH378277 I 1 C 0 s cebCap1.NW_016107942v1 67414 15 - 883013 GGGGCTATTAGTTTT i cebCap1.NW_016107942v1 I 1 C 0 e manLeu1.NW_012101680v1 9944 4050 + 85016 I a score=1679449.000000 s hg38.chr3_KI270784v1_alt 118359 241 + 184404 AACAATGAC---CATTAACCCGTTGACCTAAGCTAGCTCATTAATATTATCTTTAAG-AAAAAATGCTGCACTCC-TAGGACATTTATACA-TTTTTTAGGCTTGGTGGAAGATGTCTTGTGTGGCCATAAATATTCTGCAATTGTAATTTGTGGCCAGC-TAAAAAATGTGACTATTTTCAGACTATAGGTATTAACCTTCTAGATGCCTGGTGAGTACCTAGCTACTCATATTAAGATAGAGTATT s panTro5.chr3 14251 242 - 202621043 AACAATGAC---CATTAACCTGTTGACCTAAGCCAGCTCATTAATATTATCTTTAAG-AAAAAATGCTGCACTCC-TAGGACATTTATACA-TTTTTCAGGCTTGGTGGAAGATGTCTTGTATTGCCATAAATATTCTGCAATTGTAATTTGTGGCCAGTAAAAAAAATGTGGCTATTTTCAGACTATAGGTATTAACCTTCTAGATGCCTGGTGAGTACCTAGCTACTCATGTTAAGATAGAGTATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 9167 241 - 205426864 AACAGTGAC---CATTAACCCGTTGACCTAAGCCAGCTCATTAATATTATCTTTAAG-AAAAAATGCTGCACTCC-TAGGACATTTATACA-TTTTTTAGGCTTGGTGGAAGATGTCTTGTATGGCCATAAATATTCTGCAATTGTAATTTGTGGCCAGC-TAAAAAATGTGACTATTTTCAGACTATAGGTATTAACCTTCTAGATGCCTTGTGAGTACCTAGCTACTCATATTAAGATAGAGAATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 27726 230 + 508821 --------------TTAACCCATTGACCTAAGCTAGCTCATTAATATTATCTTTAAG-AAAAAATGCTGCACTCC-TAGGACATTTATACA-TTTTTCAGGCTTGGTGGAAGATGTCTTGTATGGCCATAAATATTCTTCAATTGTAATTTGTGGCCAGC-TAAAAAATGTGGCTATTTTCAGACCATGAGCATTAACCTTCTAGATGCCTGGTGAGTACCTAGCTACTCATATTAAGATAGAGTATT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44672248 241 + 86207423 AACAATGAC---CATTAACCCATTGACCTAAGCTAGCTCATTAATATTATTTTTAAG-AAAAAATGCTGCACTCC-TAGGACATTTATACA-TTTTTCAGGCTTGGTGGAAGATGTCTTGTATGGCCATAAATATTCTGCAATTGTAATTTGTGGCCAGC-TAAAAAATGTGGCTATTTTCAGACCATGAGTATTAACCTTCTAGATGCCTTGTGAGTACCTAGCTACTCATATTAAAATAGACTATT i nomLeu3.chr21 C 0 I 316 s rheMac8.chr2 65162 241 - 204787373 AACAATGAC---CATTAACCTGTTGACCTAAGTTAGCTCATTAATATTATCTTTAAG-AAAAAATGCTGCACTTC-TAAGACATTTATACA-TTTTTGAGGCTTAGTGGAAGATGTCTTGTATGGCCAAGAATATTCTGCAATTGTAATATGTGGCCAGC-TAAAAAATGTGGCTATTTTCAGACCATAAGTATTATCCTTCTAAATGCCTTGTGAGTACCTAGCTACTCATATTAAGACAGAGTATT i rheMac8.chr2 C 0 C 0 s macFas5.chr6 14076 237 - 181584905 aacaaTGAC---CATTAACCTGTTGACCTAAGCTAGCTCATTAATATTATCTTTAAG-AAAAAATGCTGCACTTC-TAAGAC----ATATG-TTTTTGAGGCTTGGTGGAAGATGTCTTGTATGGCCAAAAATATTCTGCAATTGTAATATGTGGCCAGC-TAAAAAATGTGGCTATTTTCAGACCATAAGTGTTATCCTTCTAAATGCCTTGTGGGTACCTAGCTACTCATATTAAGACAGAGTATT i macFas5.chr6 I 316 C 0 s macNem1.NW_012018355v1 122723 241 - 5309094 GACATTGAC---CATTAACCCGTTGACCTAAGCTAGCTCATCAATATTATCTTTAAG-AAAAACTGCTGTACTCC-TAGGACATTTATACA-TTTTTCAAGCTTGGTGGAAGATGTCTCGTATGATCATAAATATTCTGCAATTGTAATTTGTGGCCAGC-TAAAAAATGTGGCTATTTTCAGACCGTAACTATTAACTTTCTAGATGCCTTGTGAGTACCTAGCTACTCATATTAAGATAGAATATT i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012005170v1 10021 243 + 97742 AACAATGAC---CATTTACCTGTTGACTTAAGCTAGCTCATTAATGTTATCTTTAAGAAAAAAATGCTGCACTTCTTAAGACATTTATACG-TTTTTGAGGCTTGGTGGAAGATGTCTTGTACGGCCAAAAATATTCTGCAATTGTAATATGTGGCCAGC-TAAAAAATGTGGCTATTTTCAGACCATAACTATTATTCTTCTAAATGCCTTGTGAGTACCTAGCTACTCATATTAAGACAGAGTATT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 29502 241 + 108555830 AACAATGAC---CATTAACCTGTTGACCTAACCTAGCTCATTAATATTATCTTTAAG-AAAAAATGCTGCACTCC-TAGGATATTTATACA-TTTTTGAGGCTTGGTGGAAGATGTCTAGTATGGCCATAAATATTCTGCAATTGTAATTTGTGGCCAGC-TGAAAAATATGGCTATTTTCAGACCATAAGTATTAACCTTCTAGATGCCTCGTGAGTACCTACCTAGTCATATTAAGATAGAGTATT i chlSab2.chr12 C 0 C 0 s colAng1.NW_012114821v1 31122 241 + 20575453 AACAATGAC---CATTAACCTGTTGACCTAAGCTAACTCCTTAATATTATCTTTAAG-AAAAAATACTGCACTCC-TAGGACATTTATACA-TTTTTCAGGCTTGGTGGAAGATGTCTTGTATGGCCATAAATATTCTGCAATTGTAATTTGTGGCCAGC-TAAAAAATGTGGCTATTTTCAGACCATAAGTATGAACTTTCTAGATGCCTTGTGAGTACCTAGCTACTCATATTAAGATAGAGTATT i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 34534 240 - 117903854 CACAATGAC---CATTAAACCTTTGACCTAAGCTAGCTCATTAATATTATCTTTTA--AAAAAATGCTGCACTCC-TAGGACATATATACA-TTTTTCAGTCTTGGTGGAAGATGTCTTGTATGGCTATAAATATTCTGCAATTGTAATTGGCGGCCAGC-TAAAAACTGTGGCTATTTTCAAACCAAAAGGATTAATCTTTTAGATGCCTTGAGAGTGCCTCACTACTCATATTAAGATAGAGTACT i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 102595 244 + 3265726 AACAATGGCTATTATTAAACCTTTGACTTAAGCTAGCTCATTAATACTATCTTAAA--AAAAAATGCTGTACTTC-TAGGACATTTATGTATTTTTTCAGGCTTGGTGGAAGATGTCTTGTATGGCCGTACATATTCTGCAATTGTAATTGGTGGCCAGC-TAAAATATGTGGCTATTTTCAGAACATAAGTATTAATCTTTCAGCTGTCTTGTGAGTACCTAGCTACCCATATTAAGATAGAGTATT i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 67429 241 - 883013 CACAATGAC---CATTAAGCCTTTGACCTAAGCCAGCTCATTAATATTATCTTTAAG-AAAAAATGCTGCACCCC-TAGGACATATATACA-TTTTTCAGTCTTGGTGGAAGATGTTTTTTATGGCTATAAATATTCTGCAATTGTAATTGGTGGCCAGC-TAAAAAATGTGGCTATTTTCAAACCAAAAGTATTAACCTTTTAGATGCCTTGAGAGTGCCTCACTACTCATATTAAGTTAGAATAGT i cebCap1.NW_016107942v1 C 0 C 0 e manLeu1.NW_012101680v1 9944 4050 + 85016 I a score=740947.000000 s hg38.chr3_KI270784v1_alt 118600 100 + 184404 CTAGTCATGTGTATTAAACTAGAAGCTTGGTAACCATGAGTTCCTCTAAT-----------ACAGCAAGTCTACTCCTCAAGGAGAAAATGTATTTCTCAGGAATTTTGTG s panTro5.chr3 14493 100 - 202621043 CTAGTCATGTTTATTAAACTAGAAGCTTGGTAACCATGAGTTCCTCTAAC-----------ACAGCAAGTCTACTCCTCAAGGAGAAAATGTATTTCTCAGGAATTTTGTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 9408 100 - 205426864 CTAGTCATGTTTATTAAACTAGAAGCTTGGTAACCATGAGTTCCTCTAAC-----------ACAGCAAGTCTACTCCTCAAGGAGAAAATGTATTTCTCAGGAATTTTGTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 27956 100 + 508821 CTAGTCATGTTTACTAAACTAGAAGCTTGGTATTCATGAGCTCCTCTAAC-----------ACAGCAGGTCTACTCCTCAAGGAGAAAATGTATTTCTCAAGAATTTTGGG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44672805 100 + 86207423 cTAGTCATGTTTATTAAACTAGACGCTTAGTAACCATGAGTTCCTCTAAC-----------ACGACAAGTCTACTCCTCAAAGAGAAAATGTATTTCTCAGGAATTTTGTG i nomLeu3.chr21 I 316 C 0 s rheMac8.chr2 65403 100 - 204787373 CTAGTCATGTTTATTAAACTAGAAGCTTGGTAACCATGAGTTCCTCTAAC-----------ACAGCAAGTCTACTCCTCAAGGATAAAATATATTTCTCAGGAATTTTGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr6 14313 100 - 181584905 CTAGTCATGTTTATTAAACTAGAAGCTTGGTAACCATGAGTTCCTCTAAC-----------ACCGCAAGTCTCCTCCTCAAAGATAAAATGTATTTCTTAGGAATTTTGTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 122964 100 - 5309094 CTAGTCATGCTTATTAAACTAGAAGCTTGGTAACCATGAATTCCTCTAAC-----------ACAGCAAGTCTACTCCTCAAGGATAGACTGTATTTCTCAGGAATTTTGTC i macNem1.NW_012018355v1 C 0 C 0 s cerAty1.NW_012005170v1 10264 100 + 97742 CTAGTCGTGTTTATTAAACTAGAAGCTTGGTAACCATGAGTTCCTCTAAC-----------ACAGCAAGTCTGCTCCTCAAGGATAAAATGTATTTCTTAGGAATTTCGTG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 29743 100 + 108555830 CTAATCATGTTTATTAAACTAGAAGCTTGGTAATCATGAGTTCCTCTAAA-----------ACAGCAAGTCTACTCCTCAAGGATAAAATGTATTTCTCAGGAATTTTGTG i chlSab2.chr12 C 0 I 995 s colAng1.NW_012114821v1 31363 100 + 20575453 CTAGTCATGTTTATTAAACTAGAAGCTAGGTAGCCATGAGTTCCTCTAAC-----------ACGGCAAGTCTACTCCTCAAGGATAAAATGTATTTCTCAGGAATTTTGTG i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 34774 100 - 117903854 CTAGTCATGTTTATTAAACTAGAGGCTTGGCAACCATGAGTTTCTCTAAC-----------ACAGCAAGTCTACTTCTCAATGAGAAAACGTATTTCTCAGGAATTTTGTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 102839 111 + 3265726 CTAGTCATGTTTATTAAATTGGAGGCTTGGTAACCGTGGGTTCCTCTAACACAACAAGTAGACAGCAAGTCTACTCCTCAAGGAGAAAATGTATTTCTCTGTAATTTTGTG i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 67670 100 - 883013 CTAGTCATGTATATTAAACTAGAGGCTTGGTAACCATGAGTTTCTCTAAC-----------ACAACAAGTCTACTCCTCAATGAGAAAATGTATTTCTCAGGAATTTTGTG i cebCap1.NW_016107942v1 C 0 C 0 e manLeu1.NW_012101680v1 9944 4050 + 85016 I a score=286066.000000 s hg38.chr3_KI270784v1_alt 118700 38 + 184404 CATTTTGTTTGATGGCATTTGGTATGTTTACCAAAATG s panTro5.chr3 14593 38 - 202621043 CATTTTGTTTGATGGCATTTGGTATGTTTACCAAAATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 9508 38 - 205426864 CATTTTGTTTGATGGCATTTGGTATGTTTACCAAAATG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 28056 38 + 508821 CATTTTGTTTGATGGCATTTGGTATGTTTACCAAAATG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44672905 38 + 86207423 CATTTTGTTTGATGGCCTTTGGTATACTTACCAAAACG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 65503 38 - 204787373 CATTTTGTTTGATGGCATTTGGTATGTTTACCAAAATG i rheMac8.chr2 C 0 C 0 s macFas5.chr6 14413 38 - 181584905 CATTTTGTTTGATGGCATTTGGTATGTTTACCAAAATG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 123064 38 - 5309094 CATTTTGTTTGATGGCGTTTGGTATGTTTACCAAAatg i macNem1.NW_012018355v1 C 0 I 12 s cerAty1.NW_012005170v1 10364 38 + 97742 CATTTTGTTTGATGGCATTTCGTATGTTTACCAAAATG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 30838 38 + 108555830 CATTTTGTTTGATGGCATTTGGTATGTTTACCAAAATG i chlSab2.chr12 I 995 C 0 s colAng1.NW_012114821v1 31463 38 + 20575453 TATTTTGTTTGATGGCATTTGGTATGTTTACCAAAATG i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 34874 38 - 117903854 CATTTTGTTTGATGGAATTTGGTATCTTTACCAAAATG i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 102950 38 + 3265726 CATTATGTTTGATGGAATTTGGTATGTTTACCAAAATG i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 67770 36 - 883013 CATTTTGTTTGACGGAATTTGGTATC--TACCAAAATG i cebCap1.NW_016107942v1 C 0 C 0 e manLeu1.NW_012101680v1 9944 4050 + 85016 I a score=702246.000000 s hg38.chr3_KI270784v1_alt 118738 137 + 184404 GCAGAAAAGAGTGAAATTAGTCCTCAGAGATTTCTCAGGATTGGATA-----TAAAGTAA--CAAATGATTATAGTTAATATGCAAGTTGACACAGTTGATATGCAAAAGAAATTTTGTCTGGAACACAATGAG----------------ATTT-TTATTT s panTro5.chr3 14631 137 - 202621043 GCAGAAAAGAGTGAAATTAGTCCTCAGAGATTTCTCAGGATTGGATA-----TAAAGTAA--CAAATGATTATAGTTAATATGCAAGTTGACACAGTTGATATGCAAAAGAAATTTTGTCTGGAACACAATGAG----------------ATTT-TTATTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 9546 137 - 205426864 GCAGAAAAGAGTGAAATTAGTCCTCAGAGATTTCTCAGGATTGGATA-----TAAAGTAA--CAAATGATTATAGTTAATATGCAAGTTGACACAGTTGATATGCAAAAGAAATTTTGTCTGGAACACAATGAG----------------ATTT-TTATTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 28094 139 + 508821 GCAGAAAAGAGTGAAATTAGTCCTCAGAGATTTCTCAGGATTGGATA-----TAAAGTAAACCGAATGATTATAGTTAATATGCAAGTTGACACAGTTGATATGCAAAAGAAATTTTGTTTGAAACACAATGAG----------------Attt-ttattt i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44672943 130 + 86207423 GCAGAAAAGAGTGAAATTAGTCCTCAAAGATTTCTCAGGATTGGATA-----TAAACAAA-----ATGATTATAGTTAATATGCAAGTTGACACAGTTGATATTCAAAAGAAATCTTGTTTGAAACACAATGAA----------------Attt-tt---- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 65541 125 - 204787373 GCAGAAAAGAGTGAAATTAGTCCTCAAAGATTTCTCAGGATTGGATA-----TAAACAAA-----ATGATTATAGTTAATATGCA---------AGTTGATATGCAGAAGAAATTTTGTTTGAAACACAATGAG----------------atta-attaat i rheMac8.chr2 C 0 I 2 s macFas5.chr6 14451 141 - 181584905 GCAGAAAAGAGTGAAATTAGTCCTCAAAGATTTCTCAGGATTGGATA-----TAAACAAA-----ATGATTATAGGTAATATGCA---------AGTTGATATGCAAAAGAAATTTTGTTTGAAACACAATGAGATTTTTATTtttatttattt-atttat i macFas5.chr6 C 0 I 2 s cerAty1.NW_012005170v1 10402 125 + 97742 GCAGAAAAGAGTGAAATTAGTGCTCAAAGATTTCTCAGGATTGGACA-----TAAACAAA-----ATGATTATAGTTAATATGCA---------AGTTGATATGCAAAAGAAATTTTGTTTGAAACACAATGAG----------------ATTT-TTATAT i cerAty1.NW_012005170v1 C 0 I 12 s chlSab2.chr12 30876 131 + 108555830 GCAGAAAAGAGTAAAACTAGTCCTCAAAGATTTCTGAGGATTGGATA-----TAAACAAA-----ATGATTATAGTTAATATGTAAGTTGATGCAGTTGATATGCAAAAGAAATTTTGTTTGAAAC---ATGAG----------------Attt-ttattt i chlSab2.chr12 C 0 C 0 s colAng1.NW_012114821v1 31501 134 + 20575453 GCAGAAAAGAGTGAAATTAGTCCTCAAAGATTTCTCAGGATTGGATA-----TAAACAAA-----ATGATTATAGTTAATATGCAAGTTGATACAGTGGATATGCAGAAGAAATTTTGTTTGAAACACAATGAG----------------ATAt-ttattt i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 34912 125 - 117903854 GTAGAAAACAGTACAATTAGTCCTTAAAGATTTCTCAGGATTATATA-----TAAACAAA-----ATGATTATAGATAATATGCA---------AGTTGATACTCAAAAGGAATTTTGTTTGAAACACAATGAG----------------GTTT-TTTAtt i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 102988 140 + 3265726 GTAGAAAACAGTGAAATTAGTCCTCAAAAATTCCTCAGAATTAAATATCAAGTAAACAAA-----ATGATTATAGATAATATGCAAGTTGATATAGTTGATACTCAAAAGGAATTTTGTTTGAAACACAATGAG----------------GTTTCTCTAtt i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 67806 130 - 883013 GTAGAAAACAGTAAAATTAGTCCTCAAAGATTTCTCAGGATTATATA-----TAAACAAA-----ATGATTATAGATAATATGCAAGTTGAAACAGTTGAT----GAAAGGAATTTTGTTTGAAACACGATGAA----------------GTTT-Tttatt i cebCap1.NW_016107942v1 C 0 C 0 e manLeu1.NW_012101680v1 9944 4050 + 85016 I e macNem1.NW_012018355v1 123102 12 - 5309094 I a score=-16121.000000 s hg38.chr3_KI270784v1_alt 118875 14 + 184404 ---ATTAATTATT-----------------GTTA s panTro5.chr3 14768 14 - 202621043 ---ATTAATTATT-----------------GTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 9683 14 - 205426864 ---ATTAATTACT-----------------GTTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 28233 10 + 508821 ----ttattta--------------------tta i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44673073 10 + 86207423 ----ttgtcta--------------------tta i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 65668 12 - 204787373 ---attaatta-------------------atta i rheMac8.chr2 I 2 I 1 s macFas5.chr6 14594 12 - 181584905 ---atttattt-------------------attt i macFas5.chr6 I 2 I 1 s chlSab2.chr12 31007 11 + 108555830 ---atttatt--------------------atta i chlSab2.chr12 C 0 I 16 s colAng1.NW_012114821v1 31635 6 + 20575453 ---atttat------------------------- i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 35037 16 - 117903854 tttatttattatt------------------tta i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 103128 11 + 3265726 ttcatttg-----------------------tta i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 67936 34 - 883013 tttatttattattattattattttattattatta i cebCap1.NW_016107942v1 C 0 C 0 e cerAty1.NW_012005170v1 10527 12 + 97742 I e manLeu1.NW_012101680v1 9944 4050 + 85016 I e macNem1.NW_012018355v1 123102 12 - 5309094 I a score=357584.000000 s hg38.chr3_KI270784v1_alt 118889 58 + 184404 TTATCAt--tttgagacagagtcttgctctgctgcccgggctggagtgcggt-gcaccatc s panTro5.chr3 14782 58 - 202621043 TTATCAt--tttgagacagagtcttgctctgctgcccgggctggagtgcggt-gcaccatc i panTro5.chr3 C 0 C 0 s panPan2.chr3 9697 58 - 205426864 TTATCAt--tttgagacagagtcttgctctgctgcccaggctggagtgcggt-gcaccatc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 28243 58 + 508821 ttattat--tttgagacagagtcttgctctgctgcccaggctggagtgcagt-gcaccatc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44673083 58 + 86207423 ttattat--tttgagacagagtcttggtctgttgcccaggctggagtgcagt-gcaccatc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 65681 57 - 204787373 ttTCTAt--tttgagacagagtcttgctctgttgcccaggctggagt-cagt-ataccatc i rheMac8.chr2 I 1 C 0 s macFas5.chr6 14607 58 - 181584905 ttattat--tttgagacagagtcttgctctgttgcccaggctggagtgcagt-acaccatc i macFas5.chr6 I 1 C 0 s cerAty1.NW_012005170v1 10539 58 + 97742 ttattat--tttgagacagagtcttgctctgttgtccaggctgcagtgcagt-gcaccatc i cerAty1.NW_012005170v1 I 12 I 25901 s chlSab2.chr12 31034 60 + 108555830 ttattattattagagacagagtcttgctctgttgcccaggctggagtgcagt-gcaccatc i chlSab2.chr12 I 16 C 0 s colAng1.NW_012114821v1 31641 58 + 20575453 ttattat--tttgagacagagtcttgctctgttgctcaggctggagtgcagt-acaccatc i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 35053 59 - 117903854 ttattat--tttgagacagaatcttgctctgttgcctaggctagagtgtagtggcaccatc i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 103139 59 + 3265726 ttattat--tttgagacagagtcttgctctgttgcctaggttggagtacagtggcaccatc i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 67970 59 - 883013 ttattat--tttgagacagaatcttgctctgttgcctaggctagagtgcagtggcaccatc i cebCap1.NW_016107942v1 C 0 C 0 e manLeu1.NW_012101680v1 9944 4050 + 85016 I e macNem1.NW_012018355v1 123102 12 - 5309094 I a score=387782.000000 s hg38.chr3_KI270784v1_alt 118947 74 + 184404 ctggctcactgaaacctccgcctcccaggttcaagtgattctcctgcctcagcctcccaagtagctgggattac s panTro5.chr3 14840 74 - 202621043 ctggctcactgaaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccaagtagctgggattac i panTro5.chr3 C 0 C 0 s panPan2.chr3 9755 74 - 205426864 ctggctcactgaaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccaagtagctgggattac i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 28301 74 + 508821 ctggctcactgaaacctccgcctcccaggttcaagtgattctcctgcctcagcctcccaagtagctgagattac i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44673141 74 + 86207423 ttggctcactgaaacctctgcctcccaggttcaatcaattctcctgcctcagcctcccaagtagctgggattac i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 65738 74 - 204787373 ttggctcactgaaacctctgcctcccaggttcaagggattctcctgcctcagcctcccaagtagttgagattac i rheMac8.chr2 C 0 C 0 s macFas5.chr6 14665 74 - 181584905 ttggctcactgaaacctctgcctcccgggttcaagggattcttctgcctcagcttcccaagtagttgagattac i macFas5.chr6 C 0 C 0 s chlSab2.chr12 31094 74 + 108555830 ttggctcactgaagcctctgcctcccaggttcaagtgattctcttgcctcagactcccaagtagctgggattac i chlSab2.chr12 C 0 C 0 s colAng1.NW_012114821v1 31699 74 + 20575453 ttggctcactgaaacctctgcctcccaggttcaagggattctcctgcctcagcctcccaagtagctggaattac i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 35112 71 - 117903854 tcggctcacggcaacctctgcctcccagattcaagcaa---ttctgcttcagccacccaagtagctgggattac i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 103198 74 + 3265726 ttggatcaccgcaacatctgcctcccaggttcaaacaattcttctgcctcagcctcctaagtagctgagattac i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 68029 74 - 883013 ttggctcacggcaacctctgcctcccaggttcaagcaattctcctgcttcagccacccaagtagctgggattac i cebCap1.NW_016107942v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 9944 4050 + 85016 I e macNem1.NW_012018355v1 123102 12 - 5309094 I a score=456858.000000 s hg38.chr3_KI270784v1_alt 119021 73 + 184404 aggcatgaatcaccacacccagctaatttttgtatctttagtagagacggggtttcactctgttggcc-ggctg s panTro5.chr3 14914 73 - 202621043 aggcatgaatcaccacacccagctaatttttgtatctttagtagagacggggtttcactctgttggcc-agctg i panTro5.chr3 C 0 C 0 s panPan2.chr3 9829 73 - 205426864 aggcatgaatcaccacacccagctaatttttgtatctttagtagagacggggtttcactctgttggcc-ggctg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 28375 73 + 508821 aggcatgaatcaccacactcagctaatttttgtatctttagtagagacggggtttcactctgttggcc-ggttg i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44673215 74 + 86207423 aggcatgcatcaccacactcagctaatttttgtctctttagtagagatggggtttcactctgttggccaggctg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 65812 74 - 204787373 aggcatgaatcaccacacccagctaatttttgtgtcttcagtagagatggggtttcactctgttggccaggctg i rheMac8.chr2 C 0 C 0 s macFas5.chr6 14739 74 - 181584905 aggcatgaatcaccacacccagctaatttttgtgtcttcagtagagatggggtttcactctgttggccaggctg i macFas5.chr6 C 0 C 0 s chlSab2.chr12 31168 74 + 108555830 aggcatgaattgccacacccagctaatttttgtatctttagtagagatggggtttcactctgttggccaggctg i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 13994 74 + 85016 aggcatgaatcaccacacccagctaatttttgtgtcttcagtagagatggggtttcactctgttggccaggctg i manLeu1.NW_012101680v1 I 4050 C 0 s colAng1.NW_012114821v1 31773 74 + 20575453 aggcatgaatcaccacacccagctaatttttgtgtcttcagtagagatggggtttcactctgttggccaggcta i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 35183 74 - 117903854 aggcattcatcaccacacccagctaatttttgtatctttagtagagatggggtttcactgtgttggaaaggctg i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 103272 74 + 3265726 gggcatgcaacaccacattcagctagtttttgtgtctttagtagagatgcggtttcactatgttggccaggctg i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 68103 74 - 883013 aggcattcatcagcacatccagctaatttttgtatctttggtagagatgcggtttcactgtgttggaaaggctg i cebCap1.NW_016107942v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e macNem1.NW_012018355v1 123102 12 - 5309094 I a score=534473.000000 s hg38.chr3_KI270784v1_alt 119094 72 + 184404 gtctcaaacccctgacaacaagtgatctgcccaccttggcctcccaaattgctgggattacaggcatgagcc s panTro5.chr3 14987 72 - 202621043 gtctcaaacccctgacaacaagtgatctgcccaccttggcctcccaaattgctgggattacaggcatgagcc i panTro5.chr3 C 0 C 0 s panPan2.chr3 9902 72 - 205426864 gtctcaaacccctgacaacaagtgatctgcccaccttggcctcccaaattgctgggattacaggcatgagcc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 28448 72 + 508821 gtctcaaacccctgacaacaagtgatctgcccaccttggcctcccaaattgctgggattacaggcatgagcc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44673289 72 + 86207423 gtctcaaacccctgacaacaagccatctgcccaccttggcctcccaaattgctgggattacaggcatgagcc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 65886 72 - 204787373 gtctcatacccctgacaagaagtgatctgcccaccttggcctcccaaattgctgggattacaggcttgagcc i rheMac8.chr2 C 0 C 0 s macFas5.chr6 14813 72 - 181584905 gtctcatacccctgacaagaagtaatctgcccactttggcctcccaaattgctgggattgcaggcttgagcc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 123114 72 - 5309094 gtctcaaacccctgacagcaagtgatctgcccaccttggtctcccaaattgctgggattataggcttgagcc i macNem1.NW_012018355v1 I 12 C 0 s chlSab2.chr12 31242 69 + 108555830 gtctcaaatgcctgac---aagtgatctgcccaccttggcctctcaaattgctgggattataggcatgagcc i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 14068 72 + 85016 gtctcatacccctgacaagaagtgatctgcccaccttggcctcccaaatcgctgggattacaggcttgagcc i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 31847 72 + 20575453 gtctcaaacccctgacaacaagcaatctgcccaccttggcctcccaaattgctgggattacaggcatgagtc i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 35257 72 - 117903854 gtctcaaacccctgaacaaaagtgatctgcccaccttggcctcccaaattgctgggattacaagcatcagcc i calJac3.chr13 C 0 C 0 s saiBol1.JH378277 103346 72 + 3265726 gtctcaaacccctgaacaaaggtgatctgcccaccttggcctcccaaattgcttagattacagacatgagcc i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 68177 72 - 883013 gtctcaaacccctgaacaaaagtgatctgcccaccttggcctcccagattgctgggattacaggcatcagcc i cebCap1.NW_016107942v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I a score=690324.000000 s hg38.chr3_KI270784v1_alt 119166 121 + 184404 accgcTGACAGCCACAATGAGGTTTTTAGATAATT----CTGATTTCCTGCTATTGAGCAGGGAGCTGAGCAAATTCAAC---------AGATCATGGGCCTAAAGTAGGAGAAGACTGAAGACAAACTCTAGA s panTro5.chr3 15059 121 - 202621043 accgcTGACAGCCACAATGAGGTTTTTAGATAATT----CTGATTTCCTGCTACTGAGCAGGGAGCTGAGCAAATTCAAC---------AGATCATGGGCCTAAAGTAGGAGAAGACTGAAGACAAACTCTAGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 9974 121 - 205426864 accgcTGACAGCCACAATGAGGTTTTTAGATAATT----CTGATTTCCTGCTACTGAGCAGGGAGCTGAGCAAATTCAGC---------AGATCATGGGCCTAAAGTAGGAGAAGACTGAAGACAAACTCTAGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 28520 121 + 508821 accgctgacggccACAATGAGGTTTTTAGATAATT----CTGATTTCCTGCTATTGAGCAGGGAGCTGAGCAAATTCAAC---------AGATCATGGGCCTAAAGTAGGAGAAGACTGAAGACAAACTCTAGA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44673361 121 + 86207423 actgctcccagccACAATGAGGTTTTAAAATAATT----CTGATTTCCTGCTGTTTAGCAGGGAGCTGAGCAAATTCAAC---------AGATCATGGGCCTAAAGTAGGAGCAGACTGAGGACCAACTCCAGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 65958 134 - 204787373 actgctcccagtcACAATGAGGTTTTTAAATAATTCAAACTGATTTCTTGCTGTTGAGCAGGGAGCTGAGCAAATTTATCATGGGCCTGAGATCATGGGCCTGAACTAGGAGAAGACTGAAGACAGACTCTGGA i rheMac8.chr2 C 0 C 0 s macFas5.chr6 14885 134 - 181584905 accgctcccagccACAATGAGGTTTTTAAATAATTCAAACTGATTTCTTGCTGTTGAGCAAGGAGCTGAGCAAATTTATCATGGGCCTGAGATCATGGGCCTGAACTAGGAGAAGACTGAAGACAGACTCTGGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 123186 125 - 5309094 accactcccagccATAATTAAATTTTTAAATAATTCTAACTGATTTCCTGCTGTTGAGCAGGGAGCTGAGCAAATTCAAC---------AGATCATGGGCCTAAAGTAGGAGAAGACCGAGGACAAACTCTCTA i macNem1.NW_012018355v1 C 0 C 0 s chlSab2.chr12 31311 122 + 108555830 accactcccagccACAATGAGGTTTTTAAATAATTCTAACTGATTTCCTGCTGTTGAGCAGGGAGCTGAGCAAATTGAAC---------AGATCATGGGCCTAA---AGGAGAAGACTGAAGACAAACTCTGGA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 14140 134 + 85016 accgctcccagccACAATGAAGTTTTTAAATAATTCAAACTGATTTCTTGCTGTTGAGCAAGGAGCTGAGCAAATTTATCATGGGCCTGAGATCATGGGCCTGAACTAGGAGAAGACTGAAGACAGACTCTGGA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 31919 122 + 20575453 actgctcccagccGCAATGAGGTTTTTAAATAATTCTAACTGATTTCCTGCTGTTGAGCAGGGAGCTGAGCAAATTT------------AAATCATGGGCCTAAAGTAGGAGAAGACTGAAGACAGACTCTGGA i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 35329 124 - 117903854 actgctcccagccACAATGAGGTTTTTAAATATTTCTAACTGATTTCCTGTTGTGGAGCAGGGAGCT-ACCAAATTCAGC---------ACATCATGGGCCTAAAGCAAGAGAAGACTGAGGACAAACTCTGGA i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107942v1 68249 120 - 883013 actgctcccagccACAATGAGGTTTTTAAATATTT----CTGATTTCCTGTTGTGGAGCAGGGAGCT-ACCAAATTCAGC---------ACATCGTGGGCCTAAAGAAGGAGAAGACTGAGGACAAATTCTGGA i cebCap1.NW_016107942v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378277 103418 0 + 3265726 C a score=5756608.000000 s hg38.chr3_KI270784v1_alt 119287 866 + 184404 ACATACGTGattaaattaattacaattgaaatcaaatcaaatTTAACAAGGCTGTACATCTTAGTCTCAAGATGTTTCCCCTCATTTTGAAACGTGGTGTTATTCAGTGGGAAAGAAAACTAGTGTTTATCTCCAGAGTAAAGAACAGGGTTCCCTGCAGG----GATTGATTGAGAGCTATGGCTCAGGATTAAAAATCCTTCTTTTTTCCACTtataaactaaaaattaatttctaaacccctattgactaaatggaaccctcttcttgggtaaggacattccaaagttaacctgaaaagctagttcaagccatgggtcacatatgcctcattatactctcctcgctt--tggTTTTAATTTTAATTTTAATt--------------------------ttt-aatt--t-ttttgtgggtacatactt-ggtgtatatatttatgggggtacatgacatactt------------tgatacaggcatgtaatgagtaatacataataaaaaacagg---------------------gtatctgtcccctcaagcatttatagcttgtgttataaacaatccaattaaaatagtattttagtttttataaaatgtataattaaattatttttgactataatcaccctgttttgctatcaaatactgtcttattcattctttctaaaaatttt-ttgtacccatttagcatccccactatccccc-----------atttcccacactgcccttcccag-ctccagtatccatccttata----ctatctctatgacatcgattgtttctaattttagcacccacaaataagtgagaacatctgacatttgtctttctgtgcctgacttatttcacttaatataaagactttcagttccatttatgttacagtaaatgacagactctcattctttcttatagctgaatagt s panTro5.chr3 15180 868 - 202621043 ACATACGTGattaaattaattacaattgaaatcaaatcaaatTTAATAAGGCTGTACATCTTAGTCTCAAGATGTTTCCCCTCATTTTGAAATGTGGTGTTATTCAGTGGGAAAGAAAACTAGTGTTTATCTCCAGAGTAAAGAACAGGGTTCCCTGCAGG----GATTGATTGAGAGCTATGGCTCAGGATTAAAAATCCTTCTTTTTTCCACTtataaactaaaaattaatttctaagcccctattgactaaatggacccctcttcttggataaggacattccaaagttaacctgaaaagctagttcaagccgtgggtcacatatgcctcattatactctcctcgctt--tggTTTTAATTTTAATTTTAATT--------------------------TTT-AATTTat-ttttgtgggtacatactt-ggtgtatatatttatgggggtacatgacatactt------------tgatacaggcatgtaatgagtaatacataataaaaaacagg---------------------gtatccgtcccctcaagcatttatagcttgtgttataaacaatccaattaaaatagtattttagtttttataaaatgtataattaaattatttttgactataatcaccctgttatgctatcaaatactgtcttattcattctttctaaaaattgt-ttgtacccatttagcatccccactatccccc-----------atttcccacactgcccttcccag-ctccagtaaccatccttata----ctatctctatgacatcaattgtttctaattttagcacccacaaataagtgagaacatctgacatttgtctttctgtgcttgacttatttcacttaatataaagactttcagttccatttatgttacagtaaatgacagactctcattctttcttatagctgaatagt i panTro5.chr3 C 0 C 0 s panPan2.chr3 10095 868 - 205426864 ACATACGTGattaaattaattacaattgaaatcaaatcaaatTTAATAAGGCTGTACATCTTAGTCTCAAGATGTTTCCCCTCATTTTGAAATGTGGTGTTATTCAGTGGGAAAGAAAACTAGTGTTTATCTCCAGAGTAAAGAACAGGGTTCCCTGCAGG----GATTGATTGAGAGCTATGGCTCAGGATTAAAAATCCTTCTTTTTTCCACTtataaactaaaaattaatttctaagcccctattgactaaatggacccctcttcttggataaggacattccaaagttaacctgaaaagctagttcaagccgtgggtcacatatgcctcattatactctcctcgctt--tggTTTTAATTTTAATTTTAATT--------------------------TTT-AATTTat-ttttgtgggtacatactt-ggtgtatatatttatgggggtacatgacatactt------------tgatacaggcatgtaatgagtaatacataataaaaaacagg---------------------gtatccgtcccctcaagcatttatagcttgtgttataaacaatccaattaaaatagcattttagtttttataaaatgtataattaaattatttttgactataatcaccctgttatgctatcaaatactgtcttattcattctttctaaaaattgt-ttgtacccatttagcatccccactatccccc-----------atttcccacactgcccttcccag-ctccagtaaccatccttata----ctatctctatgacatcaattgtttctaattttagcacccacaaataagtgagaacatctgacatttgtctttctgtgcctgacttatttcacttaatataaagactttcagttccatttatgttacagtaaatgacagactctcattctttcttatagctgaatagt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 28641 866 + 508821 ACATATGTGattaaattaattacaattgaaatcaaatcaaatttaatAAGGCTGTACCTCTTAGTTTCAAGATGTTTCCCCTCACTTTGAAATGTGGTGTTATTCAGTGGGAAAGAAAACTAGTGTTTATCTCCAGAGTAAAGAACAGGGTTCCCTGCAGG----GATTGATTGAGAGCTATGGCTCAGGATTAAAAATCCTTCTTTTTTCCACTtataaactaaaaattaatttctaaacccctattgactaaatggacccctcttcttggataaggacattccaaagttaacctgaaaagctagttcaagccgtgggtcacacatgcctcattatactctcctcactt--tggTTTTAATTTTAATTTTAATT--------------------------TTT-AATTTat-ttttgtgggaacatagtt-ggtgtatatatttatgggggtacatgacatactt------------tgatacaggcatgtaatgagtaatacataataaaaaacagg---------------------gtatctgt-ccctcaagcatttatagcttgtgttataaacaatccaatt-aaatagtattttagtttttataaaatctataattaaattatttttgactataatcaccctgttatgctatcaaatactgtcttattcattctttctaaaaatttt-ttgtacccatttagcatccccactatcaccc-----------atttcccacactgcccttcccag-ctccagtaaccatccttata----ctatctctatgacatcaattgtttctaattttagcacccacaaataagtgagaatatctgacatttgtctttctgtgcctgacttatttcacttaatataaagactttcagttccatttatgttacagtaaatgacagactctcattctttcttatagctgaatagt i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44673482 869 + 86207423 ACACATGTG-----ATTAATTACAATGGAAACCAAATCAAATTTAATAAGGCTATACCTCTTAGTTTCAAGACGTTT-CCCTCATTTTGAAATGTGGTGTTATTCAGTGGAAAAGAAAAACAGTGTTTTTCTCCCAAGTAAAGAACAGGGTTCCCTGCAGGGACTGACTGACTGAGAGCTATGGCTCAGGATTAAAAATCCTTCTTTTTTCCACTtataaactaaaagttaatttctaagcccctattgactaaatggacccctcttcttggacaaggacattccaaagttaacctgaaaagctggttcaagccatgggtcacaactgcctcattatactctcctccctt--tggTTTTAATTTTAATTTTAATT--------------------------TTT-AATTTat-ttttgtgggtacatagtt-ggtgtacgtatttatgggggtacatgacatgctt------------tgatacaggcatgtaatgagtaatacataataaaaaacagg---------------------gtatcagtcccctcaagcatttatagcttgtgttataaacaatccaattaaaatagtattttagtttttataaaatgtataattaaattattttttactataatcatcctgttatgctatcaaacactgtcttattcattctttctaacaatttt-ttgtacccatttcacatccccactaaccccctctttctaacaattttttgtacc-catttcacat-ccccactaaccccc----tg----tttccccactgcccttcccagcccc---ttttagcacccacaaataagtgagaacatgtgacgtttgtctttctgtgcctgacttatttcacttaacataaagacattcagttccatttctgttactgcaaatgacagactctcattctttcttatagctgaatagt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66092 867 - 204787373 ACACACGTGATTAAATTAATTACAATGGAAACCAAATCAAATTTAATAAGGCTGTACCTCTTAGTTTCAAGATGTTTCCCTTCATTTTGAAATGTGGTGTTATTCTGTGGAAAAGAAAACTAGTGTTTATCTCCAGAGTAAAGAACAGGATTCCCTGCAGGGATTGATTAACTGAGAGCTGTGGCTCAGGATTACAAATCCTTCTTTTTTCCACTtataaactaaaaattaatttccaaggccctattgactaaatggacccctcttcttggataaggatattccaaagttaacctgaaaagctggttcaagccatgggtcacacatgcctcattaaactctcctccctt--tggTTTTAATTTTAATT--------------------------------TTT-AATTTat-ttttgtgggtacatagtt-ggtgtatatatttatgggggtacatgacatactt------------tgatacaggtgtgcaatgaataatacataataaaaaatggg---------------------gaatccatcacctcaagcatttatagcttgtgttataaacaatccaatt---atactatttcagtttttacaaaatgtataattaaattgttttttactataatcaccctgttgtgctattaaatactgtcttattcattctttctaacaattttattttacctatttagcatccacactaaccccc-----------tgttcccccactgcccttcccagcctctggtaaccatccttata--ctctatctctatgacaccaattgttttgaattttagcacccacaaataagtgagaacatgtgacatttgtctttctgtgcctgacttatttcacttagcctaaagactttcaggtccatttatgttattgcaaatgtcagactctcattctttcttatagctgaatcgt i rheMac8.chr2 C 0 C 0 s macFas5.chr6 15019 864 - 181584905 ACACACGTG-----ATTAATTACAAAGGAAACCAAATCAAATTTAATAAGGCTGTACTTCTTAGTTTCAAGATGTTTCCCTTCATTTTGAAATGTGGTGTTATTCTGTGAAGAAGAAAACTAGTGTTTATCCCCAGAGTAAAGAACAGGGTTCCCTGCAGGGATTGATTGACTGAGAGCTGTGGCTCAGGATTAAAAATCTTTCTTTTTTCCACTtataaactaaaaattaatttctaagcccctattgactaaatggacccctcttcttggataaggacattccaaagttaacctgaaaagctagttcaagccatgggtcacacatgcctcattatactctcttccctt--tggTTTTAATTTTAATT--------------------------------GTT-AATTTat-ttttgtgggtacattgtt-ggtgtatatatttatgggggtacatgacatactt------------tgatacaggtgtgcaatgagtaatacataataaaaaacggg---------------------gtatccatcccctcaagcatttatagcttgtgttataaacagtccaatt---atcctattttagtttttataaaatgtataattaaattgtttttgactataatcaccctgttgtgctatcaaatactgtcttattcattctttctaacaattttattttacccatttagcatccccactaaccccc-----------tgttccctcactgcccttcccagcctctggtaaccatccttatattctctatctctatgacaccaattgttttgaattttagcacccacaaataagtgagaacatgtgacatttgtctttctgtgcctgacttatttcacttagcctaaagactttcaggtccatttatgttactgcaaatgtcagactctcattctttcttatagctgaatcat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 123311 930 - 5309094 ACACGTGTGACtaaattaattacaattgaaaccaaatcaaatttaatAAGGCTGTACCTCTTAGTTTCAAGATGTTTCCCATCATTTTGGAATGTGGTATTATTCAGTGGAAAAGAAAAACAGTGTTTATCTCCAGAGTAAAGAACAGGGTTCCCTGCAGG----GGTTGACTGAGAGCTGTGGCTCAGGACTAAACATTCTTCTTTTTTCCACTtataaactaaaaattaatttctaagcccctgttgactaaatggacccctctccttggataaggacattccaaagttaacctgaaaagctagttcaagccatgggtcacacatgcctcattatactttcccccctt--tggttttaattttaattttaatttttaatttatttttaTGGGTATATAGTTT-AATTTATAttttgtgggtacctagtt-ggtgtatatatttatgggggtacatgacataagtcatgggggtacatgatacaggcatgcactgagtaatacataattaaaaatgtatttttatttttaaaaaattttatttatatcccctcaagcacttatagcttatgttataaacattccaatt---atactcttttagtttttataaaatgtatagttaaattgtttttgactatagtcaccctgttgtgctatcaaatactgtcttattcattctttctaacaattat-ttgtacccatttagcatccccactatccccc-----------tgttcccccattgcccttcccagcctctggtaactacccttatactctctatctctatgacatcaattgtttcaacttttagcacccataaataagtgagaagatgtgacatttgtctttctgtgcctgatttatttcacttaacataaagactttcagttccatttatgttattgcaaatgacagactctcattctttcttatagctgaatagc i macNem1.NW_012018355v1 C 0 C 0 s chlSab2.chr12 31433 820 + 108555830 ACACACGTGATTAGATTAATTACAATGGAAGCTAAATCAAATTTAATAAGGC-----------------------------TCATTTTGAAATATGGTGTTATTCTGTGGAAAAGAAAACTAGTGTTTTTCTCCAGAGTAAAGAACAGGGTTCCCTGCAGGGATTGAT----TGAGATCTACGGCTCAGGATTAAAAATTCTTCTTTTTTCCACTtataaactaaagattaatttctaaacccctattgactaaatggacccctcttcttggataaggacattccaaagttaacctgaaaagctagttcaagccatgggtcacacatgcctcattatactc---tccctt--tggTTTTAATTTTAAtt--------------------------------------ttaat-ttttgtgggtatatagttgggtgtatatatttatgggggtacatgacatactt------------tgatagaggcatgcaatgagtaatacataataaaaaacggg---------------------gtatccatcccctcaagcatttatagcttgtattataaacaatccaatt---atactattttaatttttataaaatgta----taaattatttttgactataatcaccctgttgtgctatcaaatactgtcttattcattctttctaacaatttt-ttgtacccatttcacatccccactaa--tcc-----------cattcccccactgcccttcccagcctctggtaaccatccttatattctctatctctatgacatcaattgttttgaattttagcacccacaaataagtgagaacatgtgacatttgtctttctgtgcctgacttatttcacttaacataaagactttcaggtccatttatgttactgcaaatgacagactct--ttctttcttagagctgtatcgt i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 14274 863 + 85016 ACACACGT-----GATTAATTACAATGGAAACCAAATCAAATTTAATAAGGCTGTACCTCTTAGTTTCAAGATGTTTCCCTTCATTTTGAAATGTGGTGTTATTCTGTGGAGAAGAAAACTAGTGTTTATCCCCAGAGTAAAGAACAGGGTTCCCTGCAGGGATTGATTGACTGAGAGCTGTGGCTCAGGATTAAAAATCCTTCTTTTTTCCACTtataaactaaaaattaatttctaagcccctattgactaaatggacccctcttcttggataaggacattccaaagttaacctgaaaagctagttcaagccatgggtcacacatgcctcattatactctcttccctt--tggTTTTAATTTTAATT--------------------------------GTT-AATTTat-ttttgtgggtacattgtt-ggtgtatatatttatgggggtacatgacatactt------------tgatacaggtgtgcaatgagtaatacataataaaaaatggg---------------------gtatccatcccctcaagcatttatagcttgtgttataaacaatccaatt---atcctattttagtttttataaaatgtataattaaattgtttttgactattatcaccctgttgtgctatcaaatactgtcttattcattctttctaacaattttattttacccatttagcatccccactaacgccc-----------tgttcccccactgcccttcccagcctctggtaaccatccttatactctcgatctctatgacaccaattgttttgaattttagcgcccacaaataagtgagaacatgtgacatttgtctttctgtgactgacttatttcacttagcctaaagactttca-gtccatttatgttactgcaaatgtcagactctcgttctttcttatagctgaattgt i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 32041 864 + 20575453 ACACACGTGATTAAATTAATTACAATGGAAACCAAATCAAATTTAATGAGGCTGTACCTCTTCGTTTCAAGATGTTTCCCCCCATTTTGAAATGTGGTGTTATTCCGTAGAAAAGAAAACTAGTGTTTATCTCCAGAGTAAAGAACAGGGTTCCCTTCAGGGATTGATTGACTGAGAGCTATGGCTCAGGATTAAAAATCCTTC-CTTTTCCACTTACaaactaaaaattaatttctaagcccctattgactaaatggacccct---cttggataaggacattccaaagttaacctgaaaagctagttcaagccatgggtcacacatgcctcattatactctcctccctt--tggTTTTAATTTTAATTTTAATT--------------------------GTT-AATTTat-ttttgtgggtacacagtt-ggtgtatatatttatgggagtacatgacatactt------------tgatacaggcattcaatgagtaatacataataaaaaatggg---------------------gtatccatcccctcaagcatttatagcttgtgttataaacaatctaatt---atgctatttcagtttttataaaatgtataattaaattatttttgactataatcaccctgttgtgctatcagatactgtcttattcattctttctaacaatttt-ttgtacccatttcgcatccccactaatcccc-----------tgtttccccactgcccttcccagcctgtggtaaacatccttatac------tctctatgacatcaattgtttccaattttagcacccacaaataagtgagaacatgtgacatttgtctttctgtgcctgacttatttcacttaacataaagactttcagttccatttatgttactgcaaatgacagactctcattctttcttgtagctgaatcgt i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 35453 854 - 117903854 ACACATGTGATTAAATTAATTACAATTAAAACCTAATAAGATTTAATAAGGCTGTACCTCTTAGTTTCAAAATCGTTCCTGCCATTTTAAAATGTGGTGTTTTTCAGTGGAAAAGAAAAATAGTGTTTATCTCCAGGGTAAAGAACAAGCTTCCCTGCAGGGA----CTGATTGAGAGCTATGGCTCAGGATTAAAAATCCTTCTTTCTTCC-CTtgtaaaccaaaaataaattcctaagcccctattgactaaatggagccctcttattggataaggacatttcaaagttaacctgaaaagctagttcaggccatgggtcacacgtgcctcattatacgctctcttttt--tttttttaattttaatt--------------------------------ttt-aatttat-ttttgtgggtacaaaatt-tgtgtatatatttatggggctacatgacatactt------------tgatgcaggcatttaatgagtaatacataatgaaaaatggg---------------------gtatctattccctcgtgtatttattgcttgtgttataaacaatccaatt---atactcttatagtcatcgtaaaatgtatagttaaattattttttactataatcaccctgttgtgctatcaaatagtgtcttatttattctttctaacaa-ttt-tcatgcccatttagcatccccactatcctgc-----------tattcccccactgccctctccatgctctggtaaccatccttata--------ctctatgagattggttgttttgaattttagcacccacaaataaataagaacatgtgagatttgtctttctgtgtctgacttatttcacttaaaataaagattttcagttccatttatgttattgcaaatgacagacctttatcctctcttatagctgagtagt i calJac3.chr13 C 0 I 17 s saiBol1.JH378277 103418 864 + 3265726 acACATGTGATTAGATTAACTACAATTTAAACCAAATCAAATTCAACAAGGTAGTATCTCTTAGTTTTAAGATGTTTCCTGTCATTTTAAAATGTGGTATTCTTCTGTGGAAAGGAAAAATAGTGTTTATCTACAGAGTAAAGAACAAGGTTCCCTGCAGGGATTGGTTGACTGAGAGCTATGGCTCAGGATTAAAAATCCTTCTTTCTTCCACTtgtaaaccaaaaataaattcctaagcccctattgtctaaatggagccctcttcttggataaggacgtttcaaagttatcctgaaaagttagttcaggccatggatcacacatgcctcattatactctcctcccttaatttttttaattttaatt--------------------------------tttaaatttat-ttttgtggatacataatt-tgtgtatatatttatgagggtacatgacatactt------------tgatacaggcattcaatgagtaatacataataaaaaattgg---------------------gtattcattccctcattcgttgattgcttgtgttataaacaatccaatt---atactctttcagtcattataaaatgtg----taaattatttttgactgtaatcaccctgctgtgctatcaaatattgtcttattcattttttctaacaatttt-ttgtacccatataacattcccactctccccc-----------tgttcccccactgcccttcccagcctctggtaaccatccttatactc-ttatctctatgagatcaattgtttagaattttagcacccacaaacaaataagaacatatgacatttgtctttctgtgtctgatttatctcacttaacataaagactttcagttccatttatgtcattgcaaatgacagactctcattctctcttatagctggata-- i saiBol1.JH378277 C 0 C 0 s cebCap1.NW_016107942v1 68369 849 - 883013 ACACATGTGATTAAATTAATTCCAATTAAAACCAAATCAGATTTAATAAGGCTGTACCTCTTAGTTTCAAAATGTTTTCTACCATTTTAAAATGTGGTGTTCCTCAGTGGAAAAGAAAAATAGTGTTTATCTCCAGAGTAAAGAACAAGCTTCCCTGCTTGG-----TTGATTGAGAGCTATGGCTCAGGATTAAAAATCCTTCTTTCTTCCACTtgtaaaccaaaaataaattcctaagcccctattgactaaatggagccctgttaatggataaggacatttcaaaattaacctgaaaagctagttcaagccgtgggtcacaaatgcctcattatactctcctcct----tttttttaattttaatt--------------------------------ttt-CAtttat-ttttgtgggtacataatt-tgtgtatatatttatggggctacatgacatactt------------tgatgcaggcattcaataagtaatacacaatgaaaaatggg---------------------gtatccattccctcatgcatttattgcttgtgttataaacaatccaatt---atgctcttgtagtcattacaaaatgta----taaattattttttactataatcaccctgttgtgctatcaaatagtgtcttatttattctttctaacaatttt-ttgtatccatttctcatccccactatccccc-----------tgttcccccactgccctttccagcctctggtaaccatccttata--------ctctatgagatcagttgtttcgaattttagcacccacaaataaataagaacatgtgagatttgtctttctgtgtctaacttatttcacttaacataaagactttcagttccatttatgttattgcaaatgacagacccttatcctctcttatagctgaatagt i cebCap1.NW_016107942v1 C 0 N 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I a score=500288.000000 s hg38.chr3_KI270784v1_alt 120153 82 + 184404 actccactgtgtatatgtaccacattttctctatc--cagtcatctgctgatggacatttaggtctcttacaaatcttggctat s panTro5.chr3 16048 82 - 202621043 actccactgtgtatatgtaccacattttctctatc--cagtcatctgttgatggacatttaggtctcttacaaatcttggctat i panTro5.chr3 C 0 C 0 s panPan2.chr3 10963 82 - 205426864 actccactgtgtatatgtaccacattttctctatc--cagtcatctgttgatggacatttaggtctcttacaaatcttggctat i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 29507 72 + 508821 actccactgtgtgtatgtaccacattttctctatc--cagtcatctgttgatggaca----------ttacaaatcttggctat i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44674351 82 + 86207423 actccactgtgtatatgtaccacattttctctatc--cagtcatctgttgatggacatttaggtctcttacaaatcttggctat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66959 84 - 204787373 actccattgtgtacctgtaccacattttctctatcaacagtcatctgctgatggacatttaggtctcttccaaatcttggctat i rheMac8.chr2 C 0 C 0 s macFas5.chr6 15883 82 - 181584905 actccattgtgtacatatgccacattttctctatc--cagtcatctgttgatggacatttaggtctcttccaaatcttggctat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 124241 84 - 5309094 actccattgtgtatatgtaccacattttctctatcaacagtcatctattgatggacatttgggtttcttccaaatcttggctat i macNem1.NW_012018355v1 C 0 C 0 s chlSab2.chr12 32253 82 + 108555830 actccattgtgtatatgtaccacattttctctatc--cagtcatctgttgatggacatttaggtctcttccaaatcttggctat i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 15137 82 + 85016 actccattgtgtacatgtaccacattttctctatc--ctgtcatctgttgatggatatttaggtctcttccaaatcttggctat i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 32905 84 + 20575453 actccatcgtgtacatgtaccacattttctctatcaacagtcatctattgatggacatttaggtctcttccaaatcttggctat i colAng1.NW_012114821v1 C 0 C 0 s calJac3.chr13 36324 82 - 117903854 tctccattgtgtatatgtaccacattttctctatc--cagtcatctcttgatggacatctaggtttcttccgaatcttggttat i calJac3.chr13 I 17 N 0 s saiBol1.JH378277 104282 74 + 3265726 --------gtgtatatgtaccacattttctctatc--cagtcatctcttaatagacatttagattctttccaaatcttggctat i saiBol1.JH378277 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I a score=10670.000000 s hg38.chr3_KI270784v1_alt 120235 2 + 184404 ta s panTro5.chr3 16130 2 - 202621043 ta i panTro5.chr3 C 0 C 0 s panPan2.chr3 11045 2 - 205426864 tA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 29579 2 + 508821 ta i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44674433 2 + 86207423 ta i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 67043 2 - 204787373 ta i rheMac8.chr2 C 0 C 0 s macFas5.chr6 15965 2 - 181584905 ta i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 124325 2 - 5309094 tA i macNem1.NW_012018355v1 C 0 C 0 s chlSab2.chr12 32335 2 + 108555830 ta i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 15219 2 + 85016 ta i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012114821v1 32989 2 + 20575453 ta i colAng1.NW_012114821v1 C 0 C 0 s saiBol1.JH378277 104356 2 + 3265726 ca i saiBol1.JH378277 C 0 N 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I a score=645603.000000 s hg38.chr3_KI270784v1_alt 120237 144 + 184404 gcaacatttgtttttgactgacttctggaaataaaagccaccttaattggggtgaaatggtatctcattttgggtttgatttgcatttctatgatgat-agtaatgtggagcaccttttcacttgtctgtttgccatttgtatgt s panTro5.chr3 16132 142 - 202621043 gcaacatttgttttttactgacttctgg--ttaaaagccaccttaattggggtgaaatggtatctcattttgggtttgatttgcatttctatgatgat-agtaatgtggagcaccttttcatttggctgtttgccatttgtatgt i panTro5.chr3 C 0 C 0 s panPan2.chr3 11047 142 - 205426864 Gcaacatttgtttttgactgacttctgg--ttaaaagccaccttaattggggtgaaatggtatctcattttgggtttgatttgcatttctatgatgat-agtaatgtggagcaccttttcatttgtctgtttgccatttgtatgt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 29581 142 + 508821 gcaacatttgtttttgactgacttctgg--ttaaaagccaccttaattggggtgaaatggtatctcattttgggtttgatttgcatttctatgatgat-agtaatgtggagcaccttttcatttgcctgtttgccatttgtatgt i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44674435 143 + 86207423 gcaacatttgtttttaactgacttctgg--ataaaagccacctcaactgaggagaaatgatatctcattttgggtttgatttgcatttctatgaggatcagtaatgtggagaaccttttcatttgcctgtttgccatttgtatgt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 67045 143 - 204787373 gcaacatttgttttttactgacttctgg--ataaaagccaccttaactgggatgaaatggtatctcattttgggtttgatttgcatttctatgataatcagtaatgtggagcaccttttcatttgcctgtttgccatttgtatgt i rheMac8.chr2 C 0 C 0 s macFas5.chr6 15967 142 - 181584905 gcaacatttgtttttgactgacttctgg--ataaaagccaccttaactggcgtgaaatggtatctcattttgggtttgatttgcatttctatgatgatcagtaatgtggagcaccttttcatttgcctg-ttgccatttgtatgt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 124327 141 - 5309094 ccagtatttgtttctgactgacttctgg--ataaaagcccccttaactggggtgaaatgatatctcattttgggtttgatttgcatttctatgatgatcagtaacgtgaagcactttttcatttgcctgcttgccctt--tatgt i macNem1.NW_012018355v1 C 0 C 0 s chlSab2.chr12 32337 143 + 108555830 gcaacatttgtttttgactgacttctgg--ataaaagccaccttaactggggtgaaatggtatctcattttgggtttgatttgcatttctatgatgatcagtaatgtggagcaccttttcatttgcttgtttgccagttgtatgt i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 15221 142 + 85016 gcaacatttgtttttgactgacttctgg--ataaaagccactttaactgaggtgaaatggtatctcattttgggtttgatttgcatttctatgatgatcagtaatgtggagcaccttttcatttgcctg-ttgccatttgtatgt i manLeu1.NW_012101680v1 C 0 I 21042 s colAng1.NW_012114821v1 32991 143 + 20575453 gcaacatttgttcttgactgacttctgg--ataaaagccaccttaactggggtgaaatggtatctcattttgggtttgatttgcatttctatgatgatcagtaatgtggagcaccttttcatttgtctgcttgccatttgaatgt i colAng1.NW_012114821v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I a score=351221.000000 s hg38.chr3_KI270784v1_alt 120381 129 + 184404 cttcttttcataactgttcatttaagtttttgtccactctttaactggattactaga-atttttctatagaatattttgaactcaatatattGTAGtgtattagtctgtttctgcactgctat-aaaaaaa s panTro5.chr3 16274 130 - 202621043 cttcttttcataaatattcatttaagtttttgtccactctttaactggattactaga-atttttctatagaatattttgaactcaatatattGTAGtgtattagtctgtttctgcactgctataaaaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 11189 129 - 205426864 cttcttttcataaatgttcatttaagtttttgtccactctttaactggattactaga-atttttctatagaatattttgaactcaatatatTGTAGtgtattagtctgtttctgcactgctat-aaaaaaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 29723 129 + 508821 cttcttttcataaatgttcatttaagtttttgtccactctttaattggattactaga-atttttctatagaatattttgaactcagtatattgtagtgtattagtctgtttctgcactgctat-aaaaaaa i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44674578 126 + 86207423 cttcttttcataaatgttcatttaagtttttgtccactctttaattggactac--aa-ttttttctatagaatattttgaactcaatatattGTAGtgtatcagtctgtttctgcactgctat--aaaaaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 67188 128 - 204787373 cttcttttcgtaagtgttcatttaaatttttgtccactctttcattggattactaca-ttttttctataga-atttttgaacttaatatattATAGtgtattagtctgtttctgcactgctat-aaaaaaa i rheMac8.chr2 C 0 I 1 s macFas5.chr6 16109 72 - 181584905 cttcttttcataagtgttcatttaaatttttgtccactct--------------------------------ttttttggat-----------tactacatttttttctttcttt---------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018355v1 124468 123 - 5309094 cttcttttcataaatgtctatttaattttttgtccactct-----taaattactgt--ttttttctatacaattttttgaactcaatatattgtagtgtattCGTCTGTTTCTGCACTGCTAT-AAAAAAA i macNem1.NW_012018355v1 C 0 N 0 s chlSab2.chr12 32480 130 + 108555830 tttcttttcataaatatccatttaaatttttgaccactctttaattggattactacatttttttctatagaattttttgaactcaatatattgcagtgtagtagtctgtttctgcactgctat-aaaaaaa i chlSab2.chr12 C 0 C 0 s colAng1.NW_012114821v1 33134 130 + 20575453 cttcttttcataaatgtccatttaaatttttgactactctttacttggattactacttttttttctatagaattttttgaactcaatatattGTAGtgtattagtctgtttccgcactgctat-aaaaaaa i colAng1.NW_012114821v1 C 0 I 4 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I a score=464684.000000 s hg38.chr3_KI270784v1_alt 120510 179 + 184404 ctgagactggg----ttatttatc----tatttatctatttatgtattgagatgaagtcttgctctgtcacccaggctggagtgcactggcatgatcttggttcactgcaacctccaactcccaggttcaagcaattct-ctgcctcagcctcttgagtagctgagattacaggcacccaccaccatg s panTro5.chr3 16404 183 - 202621043 ctgagactgggttatttatttatc----tatttatctatttatgtattgagatgaagtcttgctctgtcacccaggctggagtgcactggcatgatcttggttcactgcaacctccaactcccaggttcaagcaattct-ctgcctcagcctcttgagtagctgagattacaggcacccaccaccatg i panTro5.chr3 C 0 C 0 s panPan2.chr3 11318 183 - 205426864 ctgagactgggttatttatttatc----tatttatctatttatgtattgagatgaagtcttgctctgtcacccaggctggagtgcactggcatgatcttggttcactgcaacctccaactcccaggttcaagcaattct-ctgcctcagcctcttgagtagctgagattacaggcacccaccaccatg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 29852 175 + 508821 ctaagactggg--------ttatt----tatttatctatttatgtattgagatgaagtcttcctctgtcacccaggctggagtgcactggcatgatcttggttcactgcaacctccaactcccaggttcaagcaattct-ctgcctcagcctcttgagtagctgagattacaggcacccaccaccatg i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44674704 183 + 86207423 ctgagactggattatttatttatc----tatttatctatttatgtattgagatgaagtcttgctctgtcacccaggctggagtgcagtggcatgatcttggttcactgcaatctccacctcctgggttcaagcaattct-ctccctcagcctcttgagtagctgagattacaggcacctgacaccatg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 67317 175 - 204787373 ctgagactggg--------ttatt----tatctatttacttatttattgagatgaagtcttgctctgtcacccaggctggagtgcactggcacaatctcggttcactgcaacctccatctcctgggttcaagcaattct-ctgcctcagcctctagagtagctgggattacaggcacccgccaccatg i rheMac8.chr2 I 1 C 0 s macFas5.chr6 16181 169 - 181584905 -------cttt--------ttttt----ttttttttttttttttttttgagatagagtcttgctgtgtctcctaggctggagtgcagtggcccaatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagcctcccaagtagctgggactacaggcgtccaccgccaca i macFas5.chr6 C 0 C 0 s chlSab2.chr12 32610 173 + 108555830 --cagactggg--------ttatt----tatctatttatttatttattgagacgaagtcttgctctgtcacccaggctggaatgcactggcattccatcggttcactacaacctctacctcctgggttcaagcaattct-ctgcctcagccttttgagtagctgggattacaggcatctgccactatg i chlSab2.chr12 C 0 C 0 s colAng1.NW_012114821v1 33268 179 + 20575453 ctgagactggg--------ttatttatCTATCTAtttatttatttattgagatgaagtctggctccgtcgcccaggctggagtgcactggcacgatctctgttcactgcaacctccacctcccaggttcaagcaattct-ctgcctcaggctcttgaatagctggtattacaggcacctaccaccatg i colAng1.NW_012114821v1 I 4 N 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I a score=316023.000000 s hg38.chr3_KI270784v1_alt 120689 139 + 184404 cccagataagttttgtattttcagtagaaatggggtttcaccatcttggcgaggctggtcttgaactcttgacctcgtgatccacctgcctcagcctcctaaagtgctgggattacaggcatgcgccactgcgcctggc s panTro5.chr3 16587 139 - 202621043 cccagataagttttgtattttcagtagaaatggggtttcaccatcttggccaggctggtcttgaactcttgacctcgtgatccacctgcctcagcctcccaaagtgctgggattacaggcatgagccactgcacctggt i panTro5.chr3 C 0 C 0 s panPan2.chr3 11501 139 - 205426864 cccagataagttttgtattttcagtagaaatggggtttcaccatcttggccaggctggtcttgaactcttgacctcgtgatccacctgcctcagcctcccaaagtgctgggattacaggcatgagccactgcacctggc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 30027 139 + 508821 cccagctaagttttgtatttttagtagaaatggggtttcaccatcttggacaggctggtcttgaactcttgacttcgtgatccacctgcctcagcctcccaaagtgctgggattacaggcatgagccactgcacctggc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44674887 139 + 86207423 cccagctaagttttgtatttttagtagaaacggggtttcaccatgttggccaggctggtctagaactcctgacctcgtgatccacctgccatagcctccaaaagtgctgggattacaggcatgagccactgcacctggc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 67492 139 - 204787373 cccagctaggttttgtatttttagtagagatagagtttcaccatcttggccaggctagtcttgaactcctgacctcgtgatctacccacctcggtctcccaaagagctgggattacaggcatgagccactgcacctggt i rheMac8.chr2 C 0 C 0 s macFas5.chr6 16350 139 - 181584905 cccggctaatttttgtatttttagtagagacagggtttcaccatattggccaggctggtctcgaactcctggttttgtgatccacccaccttggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccggc i macFas5.chr6 C 0 I 24429 s chlSab2.chr12 32783 139 + 108555830 cccagctaagttttgtatttttagtagagacagggtttcaccatcttggccaggctggtcttgaactcccgacatcctgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccactgcccctggc i chlSab2.chr12 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I a score=991149.000000 s hg38.chr3_KI270784v1_alt 120828 552 + 184404 gagactgggtaatttataaaggaaat-ggtttaactgagtcacagttccacatggctggagaggcctcaggaaactcacaatcatggcagatggggaagcaggcacct-cttccacgacagcaggcgagagagcatgtatgtgaagcaaaggggg-aagagccccttataaaaccatcagatctcatgagaactcactcattatcagaagaacagcctggggggaaccacccccatgatccaatcactttctgccaggtctctccctcagcacctggggattacaattcagtatgagatttgggtgggcacacaaagcctaaccatattaTGtagctattaattgcttttcagatgggtaatttacaaatattttctcccattctgtgggttttctcttcac----tttattgtttccttcactttaaaaaagctttcttacttgctgtaattccatttgtccatgtttgctttggttgtctgtgcttatggggcatagtttaagagatttttgcccaaaccaatgccctaaagagtttccccaatgttttcttgtaaa s panTro5.chr3 16726 552 - 202621043 gagactgggtaatttataaaggaaat-ggtttaattgagtcacagttccacatggctggagaggcctcaggaaacttacaatcatggcagatggggaagcaggcacct-cttccacgacagcaggcgagagagcatgtatgtgaagccaaggggg-aagagccccttataaaaccatcagatctcatgagaactcactcattatcagaagaacagcctggggggaaccacccccatgatccaatcactttctaccaggtctctccctcagcacctggggattacaattcagtatgagatttgggtgggcacacaaagcctaaccatatcaTGtagctattaattgcttttcagatgggtaatttacaaatattttctcccattctgtgggttttctcttcag----tttattgtttccttcactttaaaaaagctttcttacttgctgtaattccatttgtccatgtttgctttggttgtctgtgcttatggggcatagtttaagagatttttgcccaaaccaatgccctaaagagtttccctaatgttttcttgtaaa i panTro5.chr3 C 0 I 515 s panPan2.chr3 11640 552 - 205426864 gagactgggtaatttataaaggaaat-ggtttcattgagtcacagttccacatggctggagaggcctcaggaaacttacaatcatggcagatggggaagcaggcacct-cttccacgacagcaggcgagagagcatgtatgtgaagcaaaggggg-aagagccccttataaaaccatcagatctcatgagaactcactcattatcagaagaacagcctggggggaaccacccccatgatccaatcactttctaccaggtctctccctcagcacctggggattacaattcaatatgagatttgggtggggacacaaagcctaaccatatcaTGtagctattaattgcttttcagatgggtaatttacaaatattttctcccattctgtgggttttctcttcag----tttattgtttccttcactttaaaaaagctttcttacttgctgtaattccatttgtccgtgtttgctttggttgtctgtgcttatggggcatagtttaagagatttttgcccaaaccaatgccctaaagagtttccctaatgttttcttgtaaa i panPan2.chr3 C 0 I 508 s gorGor5.CYUI01015884v1 30166 554 + 508821 gagactgggtaatttataaaggaaat-ggtttaattgagtcacagttccacatggctggagaggcctcaggaaacttacaatcatggcagatggggaagcaggcacctccttccacaacagcaggcgagagagcatgtatgtgaagcaaagggggttagagccccttataaaaccatcagatctcatgagaactcactcattatcagaagaacagcctggggggaaccacccccatgatccaaccactttctaccaagtctctccctcagcacctggggattacaattcagtatgagatttgggtgggcacacaaagcctaaccatatcatgtagctattaattgcttttcaggtgggtaatttacaaatattttctcccattctgtgggttttctcttcac----tttattgtttccttcactttaaaaaagctttcttacttgctgtaattccatttgtccatgtttgctttggttgtctgtgcttatggggcataatttaagagatttttgcccaaaccaatgccctaaagagtttccccaatgttttcttgtaaa i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44675026 549 + 86207423 gagactggataatttataaaggaaataggtttaactgagtcacagttccacatggctggggaggcctcaggaaacttacaatcacggcagacagggaagcaggcacct-cttccacgacagcaggtgagagagcatgtatgtgaagcaaaggggg-aagagccccttataaaactgtcagatctcatgaga----actcattatcagaagaacagcctgggggaaaccacccccatgatccaatcagcttctaccaagtctctccctcagcacctggggattacaattcagtatgagatttgggtggggacacaaagcctaaccatatcaTGtagctattaattgcttttcagatgagtaatttacaaatattttctcccattctgtgggttttctcttcac----tttgttgtttccttcactttaaaaaagctttctgactttctataattccatttgtccatgtttgctttggttgtctgtgcttaaggggcataatttaagagatttttgcccaaaccaatgccttaaagagtttcccgaatgttttcttgtaaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 67631 556 - 204787373 gagactgggtaatttataaaggaaataggtttaattgagtcacagttccacatggctggggaggcctcaggaaacttacaatcagggcagatggggaagcaggcacct-cttccatgacagtaggcaagagagcatgtatgtgaagcaaagggag-aagaaccccttataaaaccatcagatctcatgagaactcactcattatcagaagaacagcatggggg-aaccacatccatgatccaatcaccttctaccaggtctctccctcaacatctggggattacaattcaatatgagatttgggtgaagatacaaagcctgatcacatcaTGtagctattaattgattttcagatgggtaatttacaaatattttctcccattctgtgggttttctcttcactttgtttattgtttccttcactttaaaaaagctttctgacttgctgtaattccatttgtccatgttttctttggttgtctgtgcttatggggcattatttaagaaatttttgcctaaaccaatcccctaaagagtttccccaatgttttcttgtaaa i rheMac8.chr2 C 0 C 0 s chlSab2.chr12 32922 557 + 108555830 aagactgggtaatttataaaggaaataggtttaattgagtcacagttccacatggctagtgaggcctcaggaaacttacaatcacggcagatggggaagcaggcactt-cttccatgacagcaggtgagacagcatgtatatgaagcaaagaggg-aagagccccttacgaaaccatcagatcccatgagaactcactcattatctgaagaacagcatgggggaaaccacccccatgatccaatcaccttctaccaggtctctccctcaacacctgggaattacaattcaatatgagatttggatggggacacaaggcctaaccatatcatgtagctattaattgcttttcagatgggtaatttacaaatgttttttctcattctgtgggttttctcttcactttgtttattgtttccttcactttaaaaaagctttctgactggctgtaattccatttgtccatgtttgctttggttgtctgtgcttatggggcattatttaagaaatttttgcccaaatgaatgtcctaaagagtttccccaatgttttcttgtaaa i chlSab2.chr12 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=348095.000000 s hg38.chr3_KI270784v1_alt 121380 209 + 184404 agtttgacagtctgaggcgttaggtttaagtctttaattcattttcattt-----ttgtatgtggcaagaagtagggttctagtttcattcttctgcccatggcttgccagttttcccagccccgtttgttacagaaactgtcttattttttgttgtatgttcttgacacttttgttgaaaataggtttagtttagctgtatgagtttgtttct s panTro5.chr3 17793 199 - 202621043 agtttggcagtttgaggcgttaggtttaagtctttaattcattttaattt-----ttgtatgtggcaagtagtagggttctagtttcattcttctgcctatggcttgccagttttcccagccctgtttgttacagaaactgtcttacttttcgttgtatgttcttgacccttttgttgaaaat----------tagccgtatgagtttgtttct i panTro5.chr3 I 515 C 0 s panPan2.chr3 12700 199 - 205426864 agtttggcagtttgaggcgttaggtttaagtctttaattcattttaattt-----ttgtatgtggcaagaagtagggttctagtttcattcttctgcctatggcttgccagttttcccagccctgtttgttacagaaactgtcttacttttcgttgtatgttcttgacccttttgttgaaaat----------tagccgtatgagtttgtttct i panPan2.chr3 I 508 C 0 s gorGor5.CYUI01015884v1 30720 209 + 508821 agtttggcagtttgaggctttaggtttaagtctttaattcattttaattt-----ttgtatgtggcaagaggtagggttctagtttcattcttctgcctatggcttgccagttttcgcagccctgtttgttacagaaactgtcttattttttgttgtatgttctcgacacttttgttgaaaataagtttagtttagctgtatgagtttgtttct i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44675575 209 + 86207423 agtttgatagtttgaggagttaggtttaagtctttaattcattttaattt-----ttgtatgtggcaagaaatagggttctagtttcattcttctgcctatggcttgccagttttcccaaccctgtttgttacagaaactgtcttattttttgttgtatgttcttgacacttttgttgacaataagtttagtttagctgtatgagcttgtttct i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 68187 214 - 204787373 agtttgatagtttgaggtgttaggtttaagtctttaattcattttaatttgatttttgtatgtggcaagaaatagggttctagtttcattcttctgcctatggcttgccagttttcccagccctatttattacagaaactgtcttattttttgttgtatgttcttgacactttcattgaaaataagtttagtttagctgtatgagtttgtttct i rheMac8.chr2 C 0 N 0 s chlSab2.chr12 33479 209 + 108555830 tttttgatagtttgaggtgttaggtttaagtcttttatttattttaatttgattgttgtatgtggtaagaaatagggttctagtttcattcttctacctatggcttgccagttttcccagccctatttattacagaaacggtcttattttttgttgtatgttcttgacacttttgttgaaaa-----ttagtttagctgtatgagttggtttct i chlSab2.chr12 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=70991.000000 s hg38.chr3_KI270784v1_alt 121589 58 + 184404 aagttctccatttcattccatttgtatttatgtctgtttttattctagtgtcatgctg s panTro5.chr3 17992 58 - 202621043 aagttctctatttcattccatttgtgtttatgtctgtttttattctagtgtcatgctg i panTro5.chr3 C 0 C 0 s panPan2.chr3 12899 58 - 205426864 aagttctctatttcattccatttgtatttatgtctgtttttattctagtgtcatgctg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 30929 58 + 508821 aagttctctatttcattccatttgtatttatgtctgtttttattctagtgtcgtgctg i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44675784 58 + 86207423 aagttctctgtttcgttcgatttgtctttacggctgtttttattctagtgtcatgctg i nomLeu3.chr21 C 0 C 0 s chlSab2.chr12 33688 56 + 108555830 aagttctctatttcattccatttgtctttatgtc--tttttattctagtgtcatgctg i chlSab2.chr12 C 0 N 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=222707.000000 s hg38.chr3_KI270784v1_alt 121647 297 + 184404 cttcaattgctataccttgatagtGGCCAGCAGGCCCC-TTGCAGAGGGCAAAGCAACGTGGAATCCGAAGTCACGCTCCGGTCGCCCTG----TGACTCCTGCGTGTTCGGGGC-ATCCGGCTCTGGCTCCGTGGCAGGGCCCGGCCCGGCGATGTGCGGTCCGTGAACCGCGCGGGCGGAAAGCGGGCGGCCGCCTGCGCTGCGGCCC--------TTGGGTGTTTCGGGAAGTCGCCCGTTCCTCGGGAGTCGGAACTGCTGAGACTCTCTCCGCGGCGAGCGGACCCAGGCGGGCGATCCGGAGGGA s panTro5.chr3 18050 301 - 202621043 ctttaattactataccttgatagtGACCAGCAGGCCCCCTTGCAGAGGGCAAAGCAACGTGGAATCCGAAATCACGCCGCGGTCGCCCTGAGTGTGACTCCTGCGTGGACGGGACCGTCCGGCTCTCGCTCCGTGGCAGGGCTCGGCCTGCGGATGTGCGGTCTGTAGACCGCGCGGGTGAAAAGCCGTCGGCCGCCTGAGCTGCGGCTC--------TTGG-TCTTTTGGGAAATCGCCCGTTCCTTGGGAGT-GGGATTCCTAAGAATCTCTCCGCAGCGAGGGAACCCAGGCAGGCGATCCGGAGGGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 12957 301 - 205426864 ctttaattactataccttgatagtGACCAGCAGGCCCCCTCGCAGAGGGCAAAGCAACGTGGAATCCGAAATCACGCCGCGGTCGCCCTGAGTGTGACTCCTGCGTGGACGGGACCGTCCGGCTCTCGCTCCGTGGCAGGGCTCGGCCTGGGGATGTGCGGTCTGTAGACCGCGCGGGTGAAAAGCCGTCGGCCGCCTGAGCTGCGGCTC--------TTGG-TCTTTTGGGAAATCGCCCATTCCTTGGGAGT-GGGATTCCTAAGAATCTCTCCGCAGCGCGGGAACCCAGGCAGGCGATCCGGAGGGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 30987 309 + 508821 ctttaattactataccttgatagtGACCAGCAGGCCCCCTTGCAGAGGGCAAAGCAACGTGGAATCCGAAATCACGCTCCGGTCGCCCTG-ACGTGACTCCTGCGTGGACGGGGCCATCCGGCTCTCGCTCCGTGGCAGGGCTCAGCCTGGGGATGTGTGGTCTGTAAACCACGCGGGTGAAAAGCGGACGGCCGCCTGAGCTACGGCTCTTTGGTCTTTGG-TCTTTTGGGAAATCGCCCATTCCTTGGGAGTCGGAATTCCTAAGAATCTCTCCACAGCGAGGGAACCCAGGCAGGCGATCCGGAGGGA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44675842 297 + 86207423 ctttaattactatacctcgatagtGACCAGCAGGCCCCCTTGCAGAGGGCAAAGCAACGTGGAATCCGAAATCACGCTCCGGCCGCCCTGAGTGTGACTCCTGCGTGGACCGGGCTGTCCGGCTCTCGCTGCATTGCAGGGCCCAGCCTGGGGCTGTGCAGCCTGTAAACCACGCGGGTGAAACGCGGACGGCCGCCCGAGT-----CTC--------TTGGGTCTTTTGGGAAATCGCCCATTCCTTGGGAGTCGGAATT-CTAAGAACCGCTCCGCAGTGAGGGAACCCAGGCCGGCGCTCTGTaggga i nomLeu3.chr21 C 0 I 7261 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=21059.000000 s hg38.chr3_KI270784v1_alt 121944 34 + 184404 CGTGAGCGCCCCGCGGGCC----------------CAGCCCTCGGCCCGC s panTro5.chr3 18351 50 - 202621043 CGGGAGCGCCCCGCGGGCCGACGCCGCTGTGGGCCCAGCCCTCGGCCCGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 13258 50 - 205426864 CGGGAGCGCCCCGCGGGCCGACGCCGCTGTGGGCCCAGCCCTCGGCCCGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 31296 50 + 508821 CGTGAGCGCCCCGCGGGCCGACGCCGCTGTGGGCCCAGCCCTTGGCCCGC i gorGor5.CYUI01015884v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44676139 7261 + 86207423 I a score=-3569.000000 s hg38.chr3_KI270784v1_alt 121978 11 + 184404 CCTGG---------------------------------------------AGGCGG s panTro5.chr3 18401 56 - 202621043 CCTGGGCGCTGAGCAGCTTTCGCGGGGGCCGGGGCTGCTGCTGCTCCCGGAGGCGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 13308 11 - 205426864 CCTGGGCGCTG--------------------------------------------- i panPan2.chr3 C 0 I 64 s gorGor5.CYUI01015884v1 31346 55 + 508821 CCTGGGCGCCGAACAGCCTTCGCGGGCGCC-GGGCCGCTGTTGCTCCTGGAGGCAG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44683400 11 + 86207423 CCCGGGGGCGG--------------------------------------------- i nomLeu3.chr21 I 7261 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=7866.000000 s hg38.chr3_KI270784v1_alt 121989 34 + 184404 GAGACCGCTTTCCTCCCC--------------GTCCCTCGCCCCGTCG s panTro5.chr3 18457 30 - 202621043 ACGAGCGCGCTCCTCTCC--------------GTCCCTGGCTCC---- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 31401 34 + 508821 AAGACCGCTTTCCTCTCT--------------GTCCCTCGCTCCGTCG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44683411 48 + 86207423 AAGACGGCTTTTCTCTCCTCCTCGCTCCCTCTGTCCCTTGCTGCGTCA i nomLeu3.chr21 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 13319 64 - 205426864 I a score=-3264.000000 s hg38.chr3_KI270784v1_alt 122023 8 + 184404 C--------GCCTCCC s panTro5.chr3 18487 4 - 202621043 ------------TTCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 31435 1 + 508821 C--------------- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44683459 16 + 86207423 Ctccgtctctccttcc i nomLeu3.chr21 C 0 C 0 s calJac3.chr6 130300245 8 - 158406734 --------CGCCTTCA i calJac3.chr6 N 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 13319 64 - 205426864 I a score=5897901.000000 s hg38.chr3_KI270784v1_alt 122031 5048 + 184404 CTGCCTTTCTTCTGTC--TTTCCCGCCTCTCTTCCTCCCTC----TCTTTTCTCCTCT------------------------------CCAATGTCCCCGCCGCCGTCTGTCTTTTCCTCTCTCCGTCTCTCCCTTTCTCGCTGTCTCTGTTTTTCTTCTCATCTCTATTTCTTCAACCTTATATGATGCTACTGTATCTCTGTGTTACTGTTATTTGTTGCAAGTGTACTTTGCAACAAAGTACG-TTTCGTGAAGATATTTACATTCCCATTTAGACACGTTatttaggtatgtgcatttgtttaatagacgtaagggtgtttcagacttattctacagcacagtttaagcataatttttataagcactgacaacccgaaaattgtgtgactcacatgcctgtgatttttttccgttgcactggtcttgaacaaaagctctacatctgcaatttatatctgTGTGGTATCATCGAATC-GCCCCGTTTACTGGAGTGACAGAACACGATTTCCCGACTACGACAAGAGCTATGGGCAGTGGGGAGGTCAGGGTTAGGATGACACAGAAATAAAGATAAGTCATTCTCTTTTTCACATCTATAGTAAACACTAATTCCATATGAAAGTAAGACAAAATTATCTTGAAATTTAAAATTCCAAACAACATCAATGTAC-----ATTATTACATATAATGAAAATTATAAAGCAACCAAA-TAATTAAAAC----AAATAA------------------------------------------------------------TGAAAGATTGTATGACCTCAATATAAAATACAAGTAGAATATATGTTAAATATAACAAAATACACTTTATTGTAGTATATTATGAAATCTCCATATCCTGCAATACAATACAATCAATTGAAATGTGTAAGATACAATAGGATTT-AATTTAGGATGTTTATAAT---GAAA--ACATGAGGCAGGTGAATAAATGAGTACACTCATTTACCATTTAATATATCGTTACTTAATTTTTTTGTAAAAATATTAAAAGTAAACACCTTGCATGGTAATTTTACTATAATTATATCAAACTTT-AAAATGTGTAATCATTTTTCCACAGCAAGTGCTATTAATGTTTTTTGGATATTAGTACTTCACGGGTTCAGGCTAGAAGAGTGAGAGCCTACAACCTATTCTGAAATAAAAGAGGAGCAATTTCTTGGTAAggcggttcatgcctgtaatcccagcactttaggaggtcaaggctggcg-tatcacttgagttcgagaccaacctggccaacgtgacaaaactctgtctgtactaataatacaaaaaaaaaaaaaaaaaataagccagg--catggt--------------------ggtatatgcctgtagtcccagctacttgagaggctgaggcatgagaattgtttgaacccaggaagcggaggttgcagtgagctaagattgtgtcactgcattccagcctgggtaaca----------------------------------------------TTTCTTTTCTACAATCTAAAATATGCAAACTCATATGATCACATTCTAATATTTTCCTGATTACATAGAAATGCATGACTGTCACCAGACCTCC------------ATATCTAACATGAAATATAAAATTTGTCTATAGCATCGGCCTTTTACAAAATGCAGAGCTTACCATTCTGATTATATTGTTCAAATTTATTTCCTATGATTTCTTCATGTTCTGTCATTTATTAACACAGTGCATCTAATATTGTCACTGCTGGTCATCTAGAAAAATCTGAGCAGTAGCAGGTCCTTGTTCTCATTCCCAGAGCTGCATCCTCTGCTGAATAGGGCCAGGGTCCTCTCAGCTCAAGCCTCATCTGATCCACTGACATGCTCAGTTAC----------------ATCATGCCCA-AAAAAGGGTGAGCTTCTCTATTCAGGCCTCTATCCCCAGGACCAGACAGTGTGGCTGAGACAAGCCAACCCTCAGCAGGTAAGACTTAAGCTCCCTGGGTGGCAATGGCATAGAAGGTCTGCACCTGGGCACACAGAGGCCCCCAGATCCAAGTCAGCAATGTGAGCTGCTCTCAGGTCAGTGGAAAATGGACCTGCTGTGCCCACACCTGGGCTAGGTCTTGATAAGTAGCCTCCAGCATAGCTCCAACAGAGGTCACCAAGCTTTTTCCAAGTGCCGGTCATTGGAATCCTAGGGCCCCAGACCTGTGCCACTGGCTGTGCCCAGTGCAAGCCCTCGAATGTCCCTTATGGTGGGCATCACAGATCTCCTGGATTTCACTGTAGTGCACAGCAGTGGAGGACTTTGATTTTTTTTTTTTTTTAACATCAAGCTGCGTTCCTCTTCTGGACAGTTCCCTGCAGAGAATGCATGTGAGAGACTCGTCAGAGCAGTCCCCACAGACCCTCATTTCCAGAACCTCTTGTGCACCCAGGTGAACCCCACTTGTCTCTCCCACTCCTTCCTGACCATCTCAGCACTGGAATGAAGTGAGGCTGAACCCCTTGTGAGTCCCCAAA--TATTCTCAGAGCTAAGATCTCAAAAATTTACTTGTCACTAAGAAACTCCCTTCCTGCTGAAGACATGTATAAAAGCTTCCTGATTATTTGCCCTTTGGGGCCacaaaaaacaaacaaacaaacaa----caaaaacaccaccattaccaagaaaaaacaCCAAGATTATACCTGCTCTGTCTTGGCAGCTGTCCTTGGAACTGATTTTTCTTTTCGTGAAGTTTCCCCAATATGAGCTGGACTCTGGTTCTTTGAATCCAATGAGAGTTTGAAATAGTGCCTCCAACTGAATACCCTGAAATTCCTAGTCCATCCTGGACACGCAGGAGCTCAGGTTGCCACCAAACCCCAGCTCTCTTCTGTTCTGCAGTGTCCAGGATCTGTATGGCCCTGGCTGCCAAGGAGCTCCCAGTTTCCTTGCCAGGAAAGCCTGTGTTGTTGCCCTGTCCCTTCTCACCTTCAAAGAGTCAAATCTTACCTAATCTAGCAGTGCTGTTTCTGGCTTTGGGCTTGGTCTCCTGGGACTTCTCCTCCTCTTTTGGATTTTTGGATTTGGCTCTAATCCTACTGCAAAAGAAAGCTTAGGTGACTCACCTCTCCCTAGGCAGGGTCCCATATTCTATCTCTGATGCATTTTTGCGGATCTGTCTTTCAAGTGAAGCTCTTTTGCCAGCGTCATGAGTGAACACGTTTCTCAAAGTCCCCTGAGGGCGCTAAGCCATTTCCCATCCCCAATCTCAAAACAAAACCCTACCAAAGACACATAGCTCAGTATCCCTGATTCCAACCCTCCTTCCAGCCTCCATAGGAGCAGCCCAAGGCCTTACCTTGCCTTTGTATGTGCTTCTCACTGGAATGGGAAGAGGCGGTCTTGCCTTTTCCTTTGAACGGTTTCTTCTCATCTGAGCCCTTTCCTGTAAAGGAGATCTGTTGGAAAGGGGGCTGGTCAGTGGAACATTGGATGGAGGAGCAGTGGAGATAGGGGTCTTCGTTTCCCTTTCCCATGTTGAAGCTCAAGTGAAAGGTGCGCTGTCTTATCCCTCTGCTACTTAAATTGTAGAGACCCTTCTCTACTATCTTACACGTCCAAATGCAGAGTGTGGGTTTATCGGCTGGACCTGCCTTTTATAGGTCCCTTGGCTGGGCGTGGCTTACTCTTATTGGCTGAACAGGTTTCTCTTTCCTGCCACTCATTAGAGCCCCAATAAGAAAAGTTTCTTGCTGTAGTTCTACTGGGGACCTAGACACAGTTAAGGGGAGACATTTTCAGGATCCTGTCATAGTGACAAG-AAACAAAGAACTGGGAGCACAGGGATCAGAAGATTGGGGAATTATTTCTTCCGATTTCTGTCCCAGTTCCTACCTGGAAGGATTTATGATCCTGTTCACCTTTCAAGATGCAGAATTAAACATACCTATATTGATATATGTTACATATTTTGCACAGAAGATAATTTATT----ATAGGGTTAAAATTATATACATAGATATTATAATTTCTCAAATGCTTGGAAACAACAAATATCAAGATATGGTTGACTGTATTAGATCCATACATATATGATGAAATAAAACTGCAGAGAAAAAGTAAATACCAAATAAAATGGCCCTTCCTACCTAAAAAATGGGGAAGATAATTAGATCAAATGCACCAAAATCGAATTGATTAGATAAGAGCCAGATGTAACCTAATCAGCCCCTATTTCCTGAGGTAGCAAAAAGTGTAGGTGGAAAAACTTTCCCCCTTTCTCACCCTGCCTCAGTCATCCTGGGAGCGCCACTGTGTTCTGTGGAATTTACCCAGCCTCCCTAGTAAAGATGGACTTGGTCCCAAACAGGTAACCCAACTGATCACAAGAAAAACAGCCTAAATGCTGAGCA-TCAGCTCCTGTCTTCACACTGCGGACACCACCTGAATCCCATCAAAGCCCACGTTGTTTCCCAACATCCACCAGCAAGACGTATTCCAGGGCAGCCTCTCAAAACTGCCTCAGTGAGACGGGGCAAGGTGTGGTGGAGCTCCAGGTTCAGAATAGCTGCCTCATCCCTTCCTACTGCGGCAGAGTCTGCCTCTGCAGGTGGGAGCCCTCCAACTGTAGAAGGGTTAGTGCATGTCCCAGCAAGTGTCCCCTAAAAGGACCTTCTCGTCTCCCCCTCTGCTGAAGAAAGCATGCAGGAATGAGACCTTCTACGTTAGGGAGTACTCAGCCTCCAGTCCCAAATGACTTGATTGACTGATGAACTGATTCCCTGAGGAGGAGAAAGACGCGGGGAAGATACTGTGTCGGGTGAATC--TGTTTTCCCAGCTGTGCTGTCTGTGCAAATAGTGGAACC----AAAAAAAAAATTAGTGGTCGACAGACACTGCCTAATGAAATTGTCTGAATTTAAGTGGAACTTATCATAAAATCATCATATACGCATCATCAATCCATGCGTCTCCAATATCATGTAAAATTTGACATATAAATAA----ATTTTGATATACT---ATATCATAATATTGTATAAAACTTTATCAGGTAATTTTATAAGA----AAGTTAAATTTTGTAGTAACATTAACATCTAAACTTAATAGAAAGCTAGAAAAATTATCTGCTCTTGTTTCAATGACTGCTTTTTGGATAACTCTGTAAAGGGTCTGAAGACGGGTCTGCTACTTACTTGATAAGACTTCGACTTCTAAA s panTro5.chr3 18491 5052 - 202621043 CTCCCTTTCTTCTACC--TTTCCTGCCTCTCTTCCTCCCTCGCTCTCTTTTCTCCTTT------------------------------CCAATGTCCCTGCCGCCGTCTGTCTTTTCCTCTCTCCATCTTTCCCTTTCTCGCTGTCTCTGTTTTTCTTCTCATCTCTATTTTTTCAACCTTATATGATTCTATTGTATCTCTGT--CATTGTTATTTGTTGCAAGTGTACTTTGCAACGAAGTACA-TTTCGTTAAGATATTTACATTCCTATTTAGACACGTTatttaggtatgtgcatttgtttaatagacgtaagggtgtttcagacttattctacagcatagtttaagcataatttttataagcactgacaacccgaaaattgtgtgactcacatgcctgtgatttttttctgttgcactggtcttgaacaaaagctctatatctgcaatttatatctgTGTGGTATCATTGAATT-GCCCCATTTACTGGAGTGACAGAACACGATTTCCTGACTACGACAAGAGCTATGGGCTGTGGGGAGGTCAGGGTTAGGATGACACAGAAATAAAGATAAGTCATTCTCTTTTTCACATCTGTAGTAAACACTAATTCCATATGAAAGTAAGACAAAATTATCTTGAAATTTAAAATTCCAAACA---TCAATGTAC-----ATTATTACATATAATGAAAATTATAAAGCAACCAAA-TAATTACAAC----AAATAA------------------------------------------------------------TGAAAGATTGTATGACCTCAATATAAAATACAAGTAGAATATATGTTAAATA--ACAAAATACACTTTATTGTAGTATATTATGAAATCTCCATATCCTGcaatacaatacaatcaattgaaacgtgtaaaatacaataGGATTT-AATTTAGGATGTTTATAAT---GAAA--ACATGAGGCAGGTGAATAAATGAGTACAATCATTTACCATTTAATATATCGTTA----ATTTTTTTGTAAAAATATTAAAAGTAAACACCTTGCATGGTAATTTTACTATAATTATATCAAACTTT-AAAATGTGTAATCATTTTTCCACAGCAAGTGCTATTAATGTTTTTTGGATATTAGTACTTCATGGGTTCAGGCTAGAAGAGTGAGAGCCTACAACCTATTCTGAAATAAAAGAGGAGCAATTTCTTGGTAAggcggttcatgcctgtaatcccagcactttaggaggtcaaggctggcg-tatcacttgagtttgagaccaacctggccaatgtgacaaaactctgtctgtactaataatacaaaaaaaaaacaaaaata---gccagg--catggt--------------------ggtatatgcctgtagtcccagctacttgagaggctgaggcatgagaattgtttgaacccaggaagcggaggttgcagtgagctaagattgtgtcactgcattccagcctgggtaaca----------------------------------------------TTTCTTTTCTACAATCTAAAATATGCAAACTCATATGATCACATTCTAATATTTTCCTGATTACATAGAAATGCATGACTGTCATCAGACCTCC------------ATATCTAACATGAAATATAAAATTTGTCTATAGCATCGGCCTTTTACAAAATGCAGAGCTTACCATTCTGATTATATCGTTCAAATTTATTTCCTATGATTTCTTCATGTTCTGTCATTTATTAACACAGTGCATCTAATATTGTCACTGCTGGTCATCTAGAGAAATCTGAGCAGTAGCAGGTCCTCGTTCTCATTCCCAGAGCTGCATCCTCTGCTGAATAGGGTCAGGGTCCTCTCAGCTCAAGCCTCATCGGACCCACTGACATGCTCAGGTACTGACATGCTCAGGTACAGCATGCCCA-AAAAAGGGTGAGCTTCTCTATTCGGGCCTCTATCCCCAGGACCAGACAGTGTGGCTGAGACAAGCCAACCCTCAGCAGGTAAGACTTAAGCTCCCTGGGTGGCAATGGCATAGAAGGTCTGCACCTGGGCACACAGAGGCCCCCAGATCCAAGTCAGCAATGTGAGCTGCTCTCAGGTCAGTGGAAAATGGACCTGCTGTGCCCACACCTGGGCTAGGTCTTGATAAGTAGCCTCCAGCATAGCTCCAACAGAGGTCACCAAGCTTTTTCCAAGTGCTGGTCATTGGAATCCTAGGGCCCCAGACCTGTGCCACTGGCTGTGCCCAGTGCAAGCCCTCGAATGTCCCTTATGGTGGGCATCACAGATCTCCTGGATTTCACTGTAGTGCACAGCAGTGGAGGACTTTGATTTTTTTTTTTTTTTAACATCAAGCTGCGTTCCTCTTCTGGACAGTTCCCTGCAGAGAATGCATGTGAGAGACTCGTCAGAGCAGTCCCCACAGACCCTCATTTCCAGAACCTCTTGTGCACCCAGGTGAACCCCACTTGTCTCTCCCACTCCTTCCTGACCATCTCAGCACTGGAATGAAGTGAGGCTGAACCCCTTGTGAGTCCCCAAA--TATTCTCAGAGCTAAGATCTCAAAAATTTACTTGTCACTAAGAAACTCCCTTCCTGCTGAAGACATGTATAAAAGTTTCCTGATTATTTGCCCTTTGGGGCCacaaaaaacaaacaaacaaacaaacaacaaaaacaccaccattaccaagaaaaaacaCCAAGATTCTACCTGCTCTGTCTTGGCAGCTGTCCTTGGAACTGATTTTTCTTTTCGTGAAGTTTCCCCAATATGAGCTGGACTCTGGTTCTTTGAATCCAATGAGAGTTTGAAATAGTGCCTCCAACTGAATACCCTGAAATTCCTAGTCCATCCTGGACACGCAGGAGCTCAGGTTGCCACCAAACCCCAGCTCTCTTCTGTTCTGCAGTGTCCAGGATCTGTACGGCCCTGGCTGCCAAGGAGCTCCCAGTTTCCTTGCCAGGAGAGCCTGTGTTGTTGCCCTGTCCCTTCTCACCTTCAAAGAGTCAAATCTTACCTAATCTAGCAGTGCTGTTTCTGGCTTTGGGCTTGGTCTCCTGGGACTTCTCCTC---TTTTGGATTTTTGGATTTGGCTCTAATCCTACTGCAAAAGAAAGCTTAGGTGACTCACCTCTCCCTAGGCAGGGTCCCATATTCTATCTCTGATGCATTTTTGCGGATCTGTCTTTCAAGTGAAGCTCTTTTGCCAGCGTCGTGAGTGAACACGTTTCTCAAAGTCCCCTGAGGGCGCTAAGCCATTTCCCATCCCCAATCTCAAAATAAAACCCTACCAAAGACACATAGCTCAGTATCCCTGATTCCAACCCTCCTTCCAGCCTCCATAGGAGCAGCCCAAGGCCTTACCTTGCCTTTGTATGTGCTTCTCACTGGAATGGGAAGAGGCGGTCTTGCCTTTTCCTTTGAACGGTTTCTTCTCATCTGAGCCCTTTCCTGTAAAGGAGATCTGTTGGAAAGGGGGCTGGTCAGTGGAACATCGGATGGAGGAGCAGCGGAGATGGGGGTCTTCATTTCCCTTTCCCATGTTGAAGCTCAAGTGAAAGGTGCGCTGTCTTATCCCTCTGCTACTTAAATTGTAGAGACCCTTCTCTACTATCTTACACGTCCAAAGGCAGAGTGTGGGTTTGTCGGCTGGACCTGCCTTTTATAGGTCCCTCGGCTGGGCGTGGCTTACTCTTATTGGCTGAACAGGTTTCTCCTTCCTGCCACTCATTAGAGCCTCAATAAGAAAAGTTTCTTGCTGTAGTTCTACTGGGGACCTAGACACAGTTAAGGGGAGACATTTTCAGGATCCTGTCATAGTGACAAG-AAACAAAGAACCAGGAGTACAGGGATCAGAAGATTGGGGAATTATTTCTTCCGATTTCTGTCCCAGTTCCTACCTGGAAGGATTTATGATCCTGTTCACCTTTCAAGATGCAGAATTAAACATACCTATATTGATATATGTTATATATTTTGCACAGAAGATAATTTATT----ATAGGGTTAAAATTATATACATAGATATTATAATTTCTCAAATGCTTAGAAACAACAAATATCAAGATATGGTTGACTGTATTAGATCCATACATATATGATGAAATAAAACTGCAGAGAAAAAGTAAATACCAAATAAAATGGCCCTTCCTACCTAAAAAATTGGGAAGATAATTAGATCAAACGCACCAAAATCGAATTGATTAGATCAGAGCCAGATGTAACCTAATCAGCCCCTATTTCCTGAGGTAGCAAAAACTGTAGGTGGAAAAACTTTCCCCCTTTCTCACCCTGCCTCAGTCATCCTGGGAGCGCCACTGTGTTCTGTGGAATTTACCCAGCCCCCCTAGTAAAAATGGACTTGGTCCCAAACAGGTAACCCAACTGATCACAAGAAAAACAGCCTAAATGCTGAACA-TCAGCTCCTGTCTTCACACCGCAGACACCACCCGAATCCCATCAAAGCCCACGTTGTTTCTCAACATCCACCACCAAGACGTATTCCAGGGCAGCCTCTCAAAACTGCCTCAGTGAGACGGGGCAAGGTGTGGTGCAGCTCCAGGTTCAGAATAGCTGCCTCATCCCTTCCTACTGCGGCGGAGTCTGCCTCTGCTGGTCAGAGCCCTCCAACT------AGCCTAGTCTATGTCCCAGCCAGTGTCCCCTAAAAGGACCTTCTCGTCTCCCCCTCTGCTGAGGAAAGCATGCAGGAATGAGACCTTCTACGTTAAGGAGTACTCAGCCTCCAGTCCCAAATGACTTGATTGACTGATGAACTGATTCCCTGAGGAGGAGAAAGACGCGGGGAAGATACTGTGTCGGGTGAATC--TGTTTTCCCAGCTGTGCTGTCTGTGCAAATAGTGGAACC----AAAAAAAAAATTAGTGGTCGACAGACACTGCCTAATGAAATTGTCTGAATTTAAATGGAACTTATCATAAAATCATCATATATGCATCATCAATCCATGCGTCTCCAATATCATGTAAAATTTATTTGACATATAA----ATTTTGATATACTATGATATCATAATATTGTATAAAATTTTATCAGGTAATTTTATAAGA----AAGTTAAATTTTGTAGTAACATTAACATCTAAACTTAATAGAAAGCTAGAAAAATTATCTGCTCTTGTTTAAATGACTGCTTTTTGGATAACTCTGTAAAGGGTCTGAAGACGGGTCTGCTACTTACTTGATAAGACTTCGACTTCTAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 13383 5094 - 205426864 ----------------------------------------------------------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAATGTCCCTGCCGCCGTCTGTCTTTTCCTCTCTCCATCTTTCCCTTTCTCGCTGTCTCTGTTTTTCTTCTCATCTCTATTTTTTCAACCTTATATGATTCTATTGTATCTCTGT--CATTGTTATTTGTTGCAAGTGTACTTTGCAACAAAGTACA-TTTCGTTAAGATATTTACATTCCTATTTAGACACGTTatttaggtatgtgcatttgtttaatagacgtaagggtgtttcagacttattctacagcatagtttaagcataatttttataagcactgacaacccgaaaattgtgtgactcacatgcctgtgatttttttctgttgcactggtcttgaacaaaagctctatatctgcaacttatatctgTGTGGTATCATTGAATT-GCCCCATTTACTGGAGTGACAGAACACGATTTCCTGACTACGACAAGAGCTATGGGCTGTGGGGAGGTCAGGGTTAGGATGACACAGAAATAAAGATAAGTCATTCTCTTTTTCACATCTGTAGTAAACACTAATTCCATATGAAAGTAAGACAAAATTATCTTGAAATTTAAAATTCCAAACA---TCAATGTAC-----ATTATTACATATAATGAAAATTATAAAGCAACCAAA-TAATTACAAC----AAACAATGAAAGATTGTATGACCTCAATATAAAATTATAAAGCAACCAAATAATTACAACAAACAATGAAAGATTGTATGACCTCAATATAAAATACAAGTAGAATATATGTTAAATA--ACAAAATACACTTTATGGTAGTATATTATGAAATCTCCATATCCTGcaatacaatacaatcaattgaaacgtgtaaaatacaataGGATTT-AATTTAGGTTGTTTATAAT---GAAA--ACATGAGGCAGGTGAATAAATGAGTGCAATCATTTACCATTTAATATATCGTTACTTAATTTTTTTGTAAAAATATTAAAAGTAAACACCTTGCATGGTAATTTTACTATAATTATATCAAACTTT-AAAATGTGTAATCATTTTTCCACAGCAAGTGCTATTAATGTTTTTTGGATATTAGTACTTCATGGGTTCAGGCTAGAAGAGTGAGAGCCTACAACCTATTCTAAAATAAAAGAGGAGCAATTTCTTGGTAAggcggttcatgcctgtaatcccagcactttaggaggtcaaggctggcg-tatcacttgagtttgagaccaacctggccaacgtgacaaaactctgtctgtactaataatac-aaaaaaaaacaaaaata---gccagg--catggt--------------------ggtatatgcctgtagtcccagctacttgagaggctgaggcatgagaattgtttgaacccaggaagcggaggttgcagtgagctaagattgtgtcactgcattccagcctgggtaaca----------------------------------------------TTTCTTTTCTACAATCTAAAATATGCAAACTCATATGATCACATTCTAATATTTTCCTGATTACATAGAAATGCATGACTGTCATCAGACCTCC------------ATATCTAACATGAAATATAAAATTTGTCTATAGCATCGGCCTTTTACAAAATGCAGAGCTTACCATTCTGATTATATCGTTCAAATTTATTTCCTATGATTTCTTCATGTTCTGTCATTTATTAACACAGTGCATCTAATATTGTCACTGCTGGTCATCTAGAGAAATCTGAGCAGTAGCAGGTCCTCGTTCTCATTCCCAGAGCTGCATCCTCTGCTGAATAGGGTCAGGGTCCTCTCAGCTCAAGCCTCATCGGACCCACTGACATGCTCAGGTACTGACATGCTCAGGTACAGCATGCCCA-AAAAAGGGTGAGCTTCTCTATTCGGGCCTCTATCCCCAGGACCAGACAGTGTGGCTGAGACAAGCCAACCCTCAGCAGGTAAGACTTAAGCTCCCTGGGTGGCAATGGCATAGAAGGTCTGCACCTGGGCACACAGAGGCCCCCAGATCCAAGTCAGCAATGTGAGCTGCTCTCAGGTCAGTGGAAAATGGACCTGCTGTGCCCACACCTGGGCTAGGTCTTGATAAGTAGCCTCCAGCATAGCTCCAACAGAGGTCACCAAGCTTTTTCCAAGTGCTGGTCATTGGAATCCTAGGGCCCCAGACCTGTGCCACTGGCTGTGCCCAGTGCAAGCCCTCGAATGTCCCTTATGGTGGGCATCACAGATCTCCTGGATTTCACTGTAGTGCACAGCAGTGGAGGACTTTGA-TTTTTTTTTTTTTTAACATCAAGCTGCGTTCCTCTTCTGGACAGTTCCCTGCAGAGAATGCATGTGAGAGACTCGTCAGAGCAGTCCCCACAGACCCTCATTTCCAGAACCTCTTGTGCACCCAGGTGAACCCCACTTGTCTCTCCCACTCCTTCCTGACCATCTCAGCACTGGAATGAAGTGAGGCTGAACCCCTTGTGAGTCCCCAAA--TATTCTCAGAGCTAAGATCTCAAAAATTTACTTGTCACTAAGAAACTCCCTTCCTGCTGAAGACATGTATAAAAGTTTCCTGATTATTTGCCCTTTGGGGCCacaaaaaacaaacaaacaaacaaacaacaaaaacaccaccattaccaagaaaaaacaCCAAGATTCTACCTGCTCTGTCTTGGCAGCTGTCCTTGGAACTGATTTTTCTTTTCGTGAAGTTTCCCCAATATGAGCTGGACTCTGGTTCTTTGAATCCAATGAGAGTTTGAAATAGTGCCTCCAACTGAATACCCTGAAATTCCTAGTCCATCCTGGACACGCAGGAGCTCAGGTTGCCACCAAACCCCAGCTCTCTTCTGTTCTGCAGTGTCCAGGATCTGTACGGCCCTGGCTGCCAAGGAGCTCCCAGTTTCCTTGCCAGGAGAGCCTGTGTTGTTGCCCTGTCCCTTCTCACCTTCAAAGAGTCAAATCTTACCTAATCTAGCAGTGCTGTTTCTGGCTTTGGGCTTGGTCTCCTGGGACTTCTCCTC---TTTTGGATTTTTGGATTTGGCTCTAATCCTACTGCAAAAGAAAGCTTAGGTGACTCACCTCTCCCTAGGCAGGGTCCCATATTCTATCTCTGATGCATTTTTGCGGATCTGTCTTTCAAGTGAAGCTCTTTTGCCAGCGTCATGAGTGAACACGTTTCTCAAAGTCCCCTGAGGGCGCTAAGCCATTTCCCATCCCCAATCTCAAAATAAAACCCTACCAAAGACACATAGCTCAGTATCCCTGATTCCAACCCTCCTTCCAGCCTCCATAGGAGCAGCCCAAGGCCTTACCTTGCCTTTGTATGTGCTTCTCACTGGAATGGGAAGAGGCGGTCTTGCCTTTTCCTTTGAACGGTTTCCTCTCATCTGAGCCCTTTCCTGTAAAGGAGATCTGTTGGAAAGGGGGCTGGTCAGTGGAGCACTGGATGGAGGAGCAGTGGAGATCGGGGTCTTCATTTCCCTTTCCCATGTTGAAGCTCAAGTGAAAGGTGCGCTGTCTTATCCCTCTGCTACTTAAATTGTAGAGACCCTTCTCTACTATCTTACACGTCCAAATGCAGAGTGTGGGTTTGTCGGCTGGACCTGCCTTTTATAGGTCCCTCGGCTGGGCTTGGCTTACTCTTATTGGCTGAACAGGTTTCTCCTTCCTGCCACTCATTAGAGCCTCAATAAGAAAAGTTTCTTGCTGTAGTTCTACTGGGGACCTAGACACAGTTAAGGGGAGACATTTTCAGGATCCTGTCATAGTGACAAG-AAACAAAGAACCGGGAGTACAGGGATCAGAAGATTGGGGAATCATTTCTTCCGATTTCTGTCCCAGTTCCTACCTGGAAGGATTTATGATCCTGTTCACCTTTCAAGATGCAGAATTAAACATACCTATATTGATATATGTTATATATTTTGCACAGAAGATAATTTATT----ATAGGGTTAAAATTATATACATAGATATTATAATTTCTCAAATGCTTAGAAACAACAAATATCAAGATATGGTTGACTGTATTAGATCCATACATATATGATGAAATAAAACTGCAGAGAAAAAGTAAATACCAAATAAAATGGCCCTTTCTACCTAAAAAATGGGGAAGATAATTAGATCAAACGCACCAAAATCGAATTGATTAGATCACAGCCAGATGTAACCTAATCAGCCCCTATTTCCTGAGGTAGCAAAAACTGTAGGTGGAAAAACTTTCCCCCTTTCTCACCCTGCCTCAGTCATCCTGGGAGCGCCACTGTGTTCTGTGGAATTTACCCAGCCCCCCTAGTAAAAATGGACTTGGTCCCAAACAGGTAACCCAACTGATCACAGGAAAAACAGCCTAAATGCTGAACA-TCAGCTCCTGTCTTCACACCGCAGACACCACCCGAATCCCATCAAAGCCCACGTTGTTTCTCAACATCCACCAGCAAGACGTATTCCAGGGCAGCCTCTCAAAATTGCCTCAGTGAGACGGGACAAGGTGTGGTGGAGCTCCAGGTTCAGAATAGCTGCCTCATCCCTTCCTACTGCGGCGGAGTCTGCCTCTGCTGGTCAGAGCCCTCCAACTGTAGAAGGGTTAGTGCATGTCCCAGCCAGTGTCCCCTAAAAGGACCTTCTCGTCTCCCCCTCTGCTGAGGAAAGCATGCAGGAATGAGACCTTCTACGTTAGGGAGTACTCAGCCTCCAGTCCCAAATGACTTGATTGACTGATGAACTGATTCCCTGAGGAGGAGAAAGACACGGGGAAGATACTGTGTCGGGTGAATC--TGTTTTCCCAGCTGTGCTGTCTGTGCAAATAGTGGAACC-----AAAAAAAAATTAGTGGTCGACAGACACTGCCTAATGAAATTGTCTGAATTTAAATGGAACTTATCATAAAATCATCATATACGCATCATCAATCCATGCGTCTCCAATATCATGTACAATTTATTTGACATATAAATACATTTTGATATACTATGATATCATAATATTGTATAAAATTTTATCAGGTAATTTTATAAGA----AAGTTAAATTTTGTAGTAAC---AACATCTAAACTTAATAGAAAGCTAGAAAAATTATCTGCTCTTGTTTAAATGACTGCTTTTTGGATAACTCTGTAAAGGGTCTGAAGACGGGTCTGCTACTTACTTGATAAGACTTCGACTTCTAAA i panPan2.chr3 I 64 M 445 s gorGor5.CYUI01015884v1 31436 5037 + 508821 -TCCctttcttctatc--tttcctgcctctcttcctccctctctctcttttctccttt------------------------------cCAATGTCCCTGCCGCCGTCTGTCTTTTCCTCTCTCCATCTTTCCCTTTCTCGTTGTCTCTGTTTTTCTTCTCATCTCTATTTTTTCAACCTTACATGATTCTATTGTATCTCCGT---GTTGTTATTTGTTGCAAGTGCACTTTGCAACAAAGTACA-TTTCGTTAAGATATTTGCATTCCTATTTAGACACGTTatttaggtatgtgcatttgtttaatagacgtaagggtgtttcagacttattctacagcatagtttaagcataatttttataagcactgacaacccgaaaattgtgtgactcacatgcctgtgatttttttctgttgcactggtcttgaaTAAAAGCTTTATATCAGCAATTTATATCTGTGTGGTATCATTGAATT-GCCCCATTTACTGGAGTGACAGAACACGATGTCCTGACTACGACAAGAGATATGGGCTGTGGGAAGGTCAGGGTTAGGATGACACAGAAATAAAGATAAGTCATTCTCTTTTTCACATCTATAGTAAACACTAATTCCATATGAAAGTAAGACAAAATTATCTTGAAATTTAAAATTCCAAACAACATCAATGTAC-----ATTATTACATATAATGAAAATTATAAAGCAACCAAA-TAATTACAAC----AAATAA------------------------------------------------------------TGAAAGATTGTATGACCTCAATATAAAATACAAGTAGAATGTATGTTAAATATAACAAAATACACTTTATTGTAGTATATTATGAAATCTCCATATCCTGCAATACAATGCAATCAATTGAAATGTGTAAGATACAATAGGATTT-AATTTGGGATGTTTATAAT---GAAA--ACATGAGGCAGGTGAATAAATGAGTAAAATCATTTACCATTTAATATATCATTACTTAATTTTTTTGTAAAAATATTAAAAGTAAACACCTTGCGTGGCAATTTTACTATAATTATATCAAACTTT-AAAATGTGTAATCATTTTTCCACAGCAAGTGCTATTAATGTTTTTTGGATATTAGTACTTCACAGGTTCAGGCTAGAATAGTGAGAGCCTACAACCTATTCTGAAATAAAAGAGGAGCAATTTCTTGGTAAggcggttcatgcctgtaatcccagcactttaggaggtcaaggctggtgttatcacttgagttcgagaccaacctggccaacgtgacaaaactctgtctgtactaataatac--acaaaaaacaaaaata---gccagg--catgct--------------------ggtatatgcctgtagtcccagctacttgagaggctgaggcatgagaattgtttgaacccaggaagaggaggttgcagtgagctaagattgtgtcactgcattccatcctgggtaaca----------------------------------------------TTTCTTTTCTACAATCTAAAATATGCAAACTCATATGGTCACATTCTAATATTTTCCTGATTACATAGAAATGCATGACTGTCATCAGACCTCC------------ACATCTAACATGAAATATAAAATTTGTCTATAGCATCAGCCTTTTACAAAATGCAGAGCTTACCATTCTGATCATATTGTTCAAATTTATTTCCTATGATTTATTCATGTTCTGTCATTTATTAACACAGTGCATCTAATGTTGTCACTGCTGGTCATCTAGAAAAATCTGAGCAGTAGCAGGTCCTTGTTCTCGTTCCCAGAGCTGCATCCTCTGCTGAATAGGGTCAGGGTCCTCTCAGCTCAAGCCTCATCTGATCCACTGACATGCTCAGTTAC----------------ATCATGCCCA-AAAAAGGGTGAGCTTCTCTATTCGGGCCTCTATCCCCAGGACCAGACAGTGTGGCTGAGACAAGCCAACCCTCAGCAGGTAAGACTTAAGCTCCCTGGGTGGCAATGGCATAGAAGGTCTGCACCTGGGCACACAGAGGCCCCCAGATCCAAGTCAGCAATGTGAGCTGCTCTCAGGTCAGTGGAAAATGGACCTGCTGTGCCCACACCTGGGGTAGGTCTTGATAAATAGCCTCCAACATAGCTCCAACAGAGGTCACCAAGCTTTTTCCAAGTGCCGGTCATTGGACTCCTAGGGCCCCAGACCTGTGCCACTGGCTGTGCCCAGTGCAAGCGCTCGAATGTTCCCTATGGTGGGCATCACAGGTCTCCTGGATTTCACTGTAGTGCACAGCAGTGGAGGACTTTGATTTTTTTTTTTTTTTAACATGAAGCTGCGTTCCTCTTCTGGACAGTTCCCTGCAGAGAATGCATGTGAGAGACTCGTCAGAGCAGTCCCCACAGACCCTCATTTCCAGAACCTCCTGTGCACCCAGGTGAACCCCACTTGTCTCTCCCACTCCTTCCTGACCATCTCAGCACTGGAATGAAGTGAGGCTGAACCCCTTGTGAGTCCCCAAA--TATTCTCAGAGCTAAGATCTCAAAAATTTACTTGTCACTAAGAAACTCCCATCCTGCTGAAGACATGTATAAAAGTTTCCTGATTATTTGCCCTTTGGGGCCacaaaaaacaaacaaacaaacaa----caaaaacaccaccattaccaagaaaaaacaCCAAGATTCTACCTGCTCTGTCTTGGCAGCTGTCCTTGGAACTGATTTTTCTTTTCCTGAAGTTTCCCCAATATGAGCTGGACTCTGGTTCTTTGAATCCAATGAGAGTTTGAAAAAGTGCCTCCAACTGAACACCCTGAAATTCCTAGTCCATCCTGGACACGCAGGAGCTCAGGCTGCCACCAAACCCCAGCTCTCTTCTGTTCTGCAGTGTCCAGGATCTGTACGGCCCTGGCTGCCAAGGAGCTCCCAGTTTCCTTGCCAGGAGAGCCTGTGTTGTTGCCCTGTCCCTTCTCACCTTCAAAGAGTCAAATCTTACCTAATCTAGTAGTGCTGTTTCTGGCTTTGGGCTTGGTCTCCTGGGACTTCTCCTC---TTTTGGATTTTTGGATTTGGCTCTAATCCTACTGCAAAAGAAAGCTTAGGTGACTCACCTCTCCCTAGGCAGGGTCCCATATTCTATCTCTGATGCATTTTTGCGGATCAGTCTTTCAAGTGAAGCTCTTTTGCCAGCGTCATGAGTGAACACGTTTCTCAAAGTCCCCTGAGGGCGCTAAGCCATCTCCCATCCCCAATCTCAAAATAAAACCCTACCAAAGACACATAGCTCAGTATCCCTAATTCCAACCCTCCTTCCAGCCTCCATAGGAGCAGCCCAAGGCCTTACCTTGCCTTTGTATGTGCTTCTCACTGGAATGGGAAGAGGCGGTCTTGCCTTTTCCTTTGAACGGTTTCTTCTCATCTGAGCCCTTTCCTGTAAAGGAGATCTGTTGGAAAGGGGGCTGGTCAGTGGAACATTGGATGGAGGAGCAGTGGAGATCGGGGTCTTCATTTCCCTTTCCCATGTTGAAGCTCAAGTGAAAGGGGCGCTGTCTTATCCCTCTGCTACTTAAATTGTAGAGACCCTTCTCTACTATCTTACACGTCCAAATGCAGAGTGTGGGTTTATCAGCTGGACCTGCCTTTTATAGGTCCCTCGGCTGGGCTTGGCTTACTCTTATTGGCTGAAC-GGTTTCTCCTTCCTGCCACTCATTAGAGCCTCAATAAGAAAAGCTTCTTGCTGTAGTTCTACTGGGGACCTAGACACAGTTAAGGGGAGACA-TTTCAGGATCCTGGCATAGTGACAAG-AAACAAAGAACCGGGAGCACAGGGATCAGAAGACTGGGGAATCATTTCTTCCGATTTCTGTCCCAGTTCCTACCTGGAAAGATTTATGATCCTGTTCACCTTTCAAGATGCAGAATTAAACATACCTATATTGATACATGTTATATATTTTGCACAGAAGATAATTTATT----ATAGTGTTAAAATTATATACATAGATATTATAATTTCTCAAATGCTTGGAAACAACAAATATCAAGATATGGTTGACTGTATTAGATCCATACATATATGATGAAATAAAACTGCAGAGAAAAAGTAAATACCAAATAAAATGGCCCTTCCTGCCTAAAAAATAGGGAAGATAATTAGATCAAACGCACCAAAATCGAATTGATTAGATTAGAGCCGGATGTAACCTAATTGGCCCCTATTTCCTGAGGTAGCAAAAAGTGTAGGTGGAAAAACTTTCCGCCTTTCTCACCCTGCCTCAGTCATCCTGGGAGCGCCACTGTGTTCTGTGGAATTTACCCAGCCCCCCTAGTAAAGATGGACTTGGTCCCAAACAGGTAACCCAACTGATCACAAGAAAAACAGCCTAGATGCTGAACA-TCAGTTCCTGTCTTCACACCGCAGACACCACCCGAATCCCATCAAAGCCCACGTTGTTTCTCAACATCCACCAGCAAGACGTATTCCAGGGCAGCCTCTCAAAATTGCCTCAGTGAGACGGGGCAAGGTGTGGTGGAGCTCCAGGTTCAGAATAGCTGCCTCATCCCTTCCTACTGCGGCAGAGTCTGCCTCTGCAGGTGGGAGCCCTCCAACT------AGCCTAGTCTATGTCCAAGCAAGTGTCCCCTAAAAGGACCTTCTTGTCTCCCCCTCTGCTGAGGAAAGCATGCAGGAATGAGACCTTCTACGTTAGGGAGTACTCAGCCTCCAGTCCCAAATGACTTGATTGACTGATGAACTGATTCCCTGAGGAGGAGAAAGACGCGGGGAAGATACTGTGTCGGGTGAATC--TGTTTTCCCAGCTGTGCTGTCTGTGCAAATAGCGGAACC----AAAAAAAAAATTAGTGGTCGACAGACACTGCCTAATGAAATTGTCTGAATTTAAATGGAACTTATCATAAAATCATCATATACGCATCATCAATCCATGCGTCTCCAATATCATGTAAAATTTATTTGACATACAAATAAATTTTGATATACTATGAT---ATAATATTGTATAAAATTTTATCAGGTAATTTTATAAGA----AAGTTAAATTTTATAGTAACATTAACATCTAAACTTAATAGAAAGCTAGAAAAATTATCTGCTCTTGTTTAAATGACTGCTTTTTGGATAACTCTGTAAAGGGTCTGAAGACGGGTCTGCTACTTACTTGATAAGTCTTCGACTTCTAAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44683475 5059 + 86207423 cttcctttcttctatc--tttcctgcctctcttcctccctt----tcttttctccttT------------------------------CCAACGTCCCTGCCG----CTGTCTTTTCCTCTCTCCATCTTTCCCTTTCTCGC--TCTCTGTTTTTCTTCTCATCTCTATTTTTTCAACCTTATATGATTCTATTGTATCTCTGTGTTATTGTTATTTGTTGCAAATGTACTTTGCAACAAAGTGCA-TTTCGTTAAGATATGTGCATTCCTATTTAGACACGTTatttaggtatgtgcatttgtttaatagacataaggctgtttcagacttattctacagcatagtttaagcataatttttataagcactgacaacccgaaaattgtg-gactcacatgctcgtgatttttttctgttgcactggtcttgagcaaaagctctaaatctgcaatttatatctgTGTAGTATCATTGAATTGGCCCCACTTACTGGAGTGACAGAACACTATTTCCTGACTACGACAAGAGCTATGGGCTGTGGGGAGGTCAGGGTTAGGATGACACAGAAATAAAGATAAGTCAT--TCTTTTTCACATCTATAGTAAACACTAATTCCATATGAAAGTAAGACAAAATTATCTTGAAATTCAAAATTCCAAACAACACCAATGTACATTTTATTATTACATATAATGAAAATTATAAAACAACCAAAGTAATTAAAAC----AAATAA------------------------------------------------------------TGAAAGATTGTATGACCTCAATATAAAATACAAGTAGAATATATGTTAAATATAACCAAATACACTTTATTGTAGTATATTATGAAATCTCCATATCCTGCAATACAATACAATCAATTGAAATGTGTAAGATACAATAGGATTTAAATTTAGGATGTTTATAATGAAGAAA--ACATGAGGCAGGTGAATAAATGCGTACAATCATTTACCATTTAATATATCGTTACTTAATTTTTTTGTAAAAATATTAAAAGTAAACACCTTGCATGGTAATTTTACTATAATTATATCAAACTTT-AAAATGTGTAAT-ATTTTTCCACAGCGAGTGCTATTAATGTTTTTTGGATATTAGTACTTCGTGGGTTCAGGCTAGAAGAGTGAGAGCCTACAACCTATTCTGAAATAAAAGAGGAGCAATTTCTTGGTAAggcggttcatgcctgtaatcccagcactttaggaggtcaaagctggcg-tatcacttgagatcgagaccaacctggccaacgtgacaaaacactgtctctactaataatac---aaaaaagaaaaaata---gccagg--catggt--------------------ggtatatgcctgtagtcccagctacttgggaggctgaggcatgagaatcatttgaacccaggaagcggaggttgcagtgagctaagattgtgtcactgcattccagcctggataacatagcaaca---tggtctcaaaaaaaa---aTTATTTTATATTTACTTTTCTTTTCTACAATCTAAAATATGCAAACTCATATGATCACATTCTAATATTTTCCTGATTACATGGAAATGCATGACTGTCATCAGACCTCC------------ATGTCTAACATGAAATATAAAATCTGTCTATAGCATCGGCCTTTTACAAAACGCAGAGCTTACCATTCTCACTATACTGTTTAAATTTATTTCCTATGATTTCTTCATGTTCT-TCATTTATTAACACAGTGCATCTAATATTGTTGCTGCTGGTCATCTAGAAAACTCTGAGCAGTAGCAGGTCCTTGTTCTCATTCCCAGAGCTGCATCCCCTGCTGAATAGGGTCAGGGTCCTCCCAGCTCAAGCCTCATCTGATCCACTGACACACTCAGTTAC----------------ATCATGCAAAGAAAAGGGGTGAGCTTCTCTATTCAGGCCTCTATCCCCAGGACCAGACAGTGTGGCTGAGACAAGCCAACCCTCAGCAGGTAAGACTTAAGCTCCCTGGGTGGCAATGGCATAGAAGATCTGCATCTGGGCACACAGAGGCCCCCAGATCCAAGTCAGCAGCGTGAGCTGCTCTCAGGTCAGTGGAAAATGGACCTGCTGTGCCCACACCTGGGCTAGGTCTTGATAAATAGCCTCCAACAAAGCTCCAACAGAGGTCACCAAGCTTTTTCCAAGTGCCAGTCATTGGACTCGTAGGGCTCCAGACCTGTGCCACTGGCTGTGCCCAGTGCAAGCCCTCGAATGTCCCCTATGGTGGGCATCACAGGTCTCCTGGATTTCACTGTAGTGCACAGCAGTAGAGGACTTTGA-----TTTTTTTTTTAATGTCAAGCTGCGTTCCTCTTCTGGACAGTTCCCCGCAGAGAAAGCATGT--GAGACTCGCCAGAGCAGTCCCCACAGACCCTCATTTCCAGAACCTCATGTGCACCCAGGTGAACCCCACTTGACTCTCCCACTCCTTCCTGACCACCTCAGCACTGGAATGAAGTGAGGCTGAATCCCTTGTGAGTCCCCAGA--TATTCTCAGAGCTAAGATCTCAAAAATTTACTTGTCACTAAGAAACTCCCTTCCTGCTCAAGACATGTATAAAAGTTTCCTGATTATTTGCCCTTTGGGGCCacaaaaaacaaacaaacaaacaaacaacaaaaacaCCACCATTGCCAAGAAAAAACACCAAGATTCTACCTGCTCTGTCTTGGCAGCTGTCCTTGGAACTGATTTTTCTTTTCCTGAAGTTTCCCCAGTATGAGGTGGACTCTGGTTCTGTGAATACAATGAGAGTTTGAGAAAGTGCCTCCAACTGAACACCCTGAAATTCCTAGTCCATCCTGGACTCACAGGAGCTCAGGTGGCCACCAAGCCCCAGCTCTCTTCTGTTCTCCAGTGTCCAGGATCTGTATGGCCCTGGCTGCCCAGGAGCTCCCGGTTTGCTTGCCAGGGGAGCCTGTGTTGCTGCCCTGTCCCTTCTCACCTTCAAAGAGCCAAATCTTACCTAATCTAGCAGTGCTGTTTCTGGCTTTGGGCTTGGTCTCCTGGGACTTCTCCTCCTCTTTTGGATTTTTGGATTTGGCTCTAACCCTACTGCAAAA-AAAGCTCAGGTGACTCACCTCTCCCTGGACAGGGTCCCATAGTCTA--TCTGATGCATTTTTGCGGATCAGTCTTTCAAGGGAAGCTCTTTTGCCAGCGTCATGAGTGAGCACGTTTCTCAAAGTCCCCTGAGGGCGCTAAGCCATTTCCCATCCCCAATCTCAAAATAAAACCCTACCAAAGACACGTAGCTCAGTATCCCTGACTCCAACCCTCCTTCCAGCCTCCGTAGGAGCAGCCCAAGGCCTTACCTTGCCTTCATATGTGCTTCTCACTGGAATGGGAAGAGGCGGTCTTGCCTTTTCCTTTGAAC-GTTTCTTCTCATCTGAGCCCTTTCCTGTAAAGGGGATCTGTTGGAAAGGGGGCTGGTCAGTGGAGCGTCGGATGCAGGAGCAGTGGAGATCGCGGTCTTCATTTCCCTCTCCCATGTTGAAGCTCAAGTGAAAGGTGCGCTGTCTTATCCCTCTCCTACTTCAATTGTAGAGACCCTTCTCTACTATCCTACA-GTCCAAATGCAGAGTGTGGGTTTGTCGGCTGCACCTGCCTTTTATGGGTCCCTCGGCTGGGCGTGGCTTACTCTTACTGGCTGCACAGGTTTCTCCTTCCTGCCACTCATTAGAGCCTCAGTCAG--AAGTTTCTTGCTGTAGTTCTACAGGGGACCTAGGCACAGTTAAGGGGAGACATTTTCAGGCTCCGGTCACAGTGACAAG-AAAC-AAGAACCGGGAGCACAGGGATCGGAAGATCGGGGAATCATTTCTTCCGATTTCTGTCCCAGTTCCTACCGGGAAGGATTTATGATCCTGTTCACCTTTCAAGATGCAGAATTAAACATACCTATATTGATATATGTTATATATTTTGCACAGAAGATAATTTATT----ATAGTGTTAAAATTATATGCATAGATATTGTAATTTCTCAAATGCTTGGAAACAACAAATGTCAAGATATGGTTGACTGTATTAGATCCATACATATATGATGAAATAAAACTGCAGAGAAAAAGTAAATTCCAAATAAAATGGCCCTTCCTACCTAAAAAATGGGGAAGATAATTAGATCAAACGCACCAAAATTGAATTGATTAGATCAGAGCCGGATGTAACCTAATCAGCCCCTATTTCCTGAAGTAGAAAAAAGTCTAGGTGGAAAAACTTTCCCCCTTTCTCACCCTGCCTCAGTCACCCTGGGAGCGCCACTGTGTTCTGTGGAATTTACCCAGCCTCCCTAGTAAAAATGGACTTGGTCCCAAACAGGTAACCCAACTG---ACAAGAAAAACAGCCTGGATGCTGAACA-TCAGCTCCTGTCTTCACACCGCCGACACCACCTGAATCCCGTCAAAGCCCGCGCTGTTTCTCCACGTCCACCAGCAAGACGTGCTCCAGGGCAGCCTCTCAACACTGCCTCAGTGACTCGGGGCAAGGTGTGCTGGAGCGCCGGGTTCACAACAGCTGCCTCATCCCTTCCTCCTGCGGCGGAGTCTGCCTCTGCAGGTCGGAGCCCTCAAACTGTAGAACGGTTAGTTCATGTCCCAGCAAGGGTCCCCTGAAAGGACCTTCTCGTCTCCCCCTCTGCTGAGGAAAGCATGCAGGAATGAGACCTTCTGCGTTAGGGAGTACTCAGCCTCCGGTCCCACATGACTTGATTGACTGATGAACTGATGCCCTGAGGAGGAGAAAGACGCGGGGAAGATAGCGTGCTGGGTGAATC--TGTTTTCCCAGCTGTGCTGTCTCTGCAAATAGTGGAACCAAAAAAAAAAAAAATTAGTGGTCGACAGACACTGCCTAATGAAATTGTCTGAATTTAAATGGAACTtatcataaaatcatcatata-atatc-------------------atatcatataaaatttatttgacatataaataaattttgatatactatgatatcataatattgtataaaattttatcaggtaattttataAGA----AAGTTAAATTTTGTAGTAACATTAACATCTAAACTTAATAGAAAGCTAGAAAAATTATATGCTCTTGTTTAAATGACTGCTTTTTGCATAACTCTGTAAGGGGTCTGAAGA-GGGGCTGCTACTTACTTGATAAGACTTCGACTCCTAAA i nomLeu3.chr21 C 0 C 0 s calJac3.chr6 130300253 5010 - 158406734 -Ttccctccctccctcagtgccattcctttcttcccttctc-ctccctttctcctttt------------------------------ccactgtccct--------ctgtatttttctctctctatccatgcaattttt-ctgtctctgttactttctccatctctatttttTCAACATTATATGATCCAGTTGTGT----GT----------------GTCAACATTTTTAGCAATAAAATTCATTTTCATTAATGTATGTACATTATTATTTAGAAATCTTATTTATGTAT-TGCATttgtttattaaacataaatctatttcagatttattttacagcatagtgtaagcataacttttataagcagtgtcaacccaaaaattgcatgactcacattactgtgattcttttctattgcagtggtggagaacaaaagctctatacctccaaTTAATATCTTTGTATTATCGTTTAATTGGTCCCATTTACTGGAGTGATTGAACACTATTTCCTGACTATTACAAGAGCTGTGGGCTGTGGGGAGGTCAGGGTTAGGATGACGCAAAAGTGAAGATAAGATATTCTCATTTTCACATCTATGGTAAATACAAATTCCATATGGAAGAGAGAC-AAATTATCTTAAAATTTAAAATTCTAAACAGCATTAATGTTTATTTTATTATTACATTGAATGAAAATTATAAAG-AACCAAA-CAAATAATACACTTACACAG------------------------------------------------------------TGAAAGACTGTATGATGTCAGTGTAAAATACAAGTCGAACATATGTCAAATACAACAAAATGTACTGTATTGTAGTATATTATGAAATCTTCATATTCTGTAATACAGTGCAATCAATTGAAATGTGTAAAATACAATATAATTTAAATCTAGGATGCTTAAAAT---AAAAATACATGAGGCAGCTGAAAAAATAAGTACAACCATTTTCTGTTTAATATATCTTGACTTAAATTTTATGT-AAAATATTAAAAGTAGACCAATTACATAGTGATTTTACTATAATTATATCAAACTGTAAAAATGTATAGACATTTTCCCACAGGTAATGCTATTCTTGGTTTATGGATATTAATACTCCATGGGTTCAGGCTGGAAGAGTGAGAACCTACAACCATTTCTGAATTTAAAAAGGAGCAATTTCTTGGTAAggcagctcatgtctgtaataccagcactttgggagaccaaggctggtg-gatcagttttgttgaagagcaatctggacaacatgacaaaaatctctctctgctaacaatat----gaggaaaaaaatta---gccaaaactatgtctttactaacaatacaagaaaaatacatgcctttagtcctagaaacttgggaggctgaggtatgagaattgtttgaacctaggaaacgaaggttgcagtgagctaagattgtgccactgcacttcagcctgggtaacataggaagactctgccaccaaaaaaaGCATATAATTTTATAT-----GTACTTTCCTACAATCTAAAATATGCAAACTCATATGATTAGGTTCCAATAGTTTCCTGATTCCATATAAATGCACAACTGTCATCAGATATCCAAAAGGCACCAAATATCTAACATGAAGTAGAAAATCAGTCTGTAGCCTTCGCGGTCTGCAAAATGCAGGGCTTACCATTCTGAGTATATTGTTTAAGTTT-TTTCCTGTGACTGCTTCAAGTTCTGCTATTTATTAAGACAGTGCATTTAAAATCATTGCTGCTGGTCATTTGGAAGAATCTGAGAAGTAACAGGTCCTTGTTCTCATTCCCAGAGCTGCATCCTCTGCTGAATAGGGTCAAGGTGCTCACAGCTCAAGCCTCATCTGATCCACTGACCGATTCAGTTAT----------------CTCCTGGCCAGGGGAGGGGTGGA--TCTCTATCCAGGGCTGAATCCCAAGGACCAGGCAGTGTGTCTGGGACAAGCCAGTCCTCAGCAGGGAAGGCATAAGCTGCCTGAGTGGCCATGGCATAGAAGGTCTGCACATGAGCACACAGAGCTCCCCGGAGCTGAGTGAGCCATGTGAACTGCTCCCAGGTCAGTGGAGAATGGACAAGCTGTGCCCACACCTGAGCTAGGTCTTGATAAATAGCCTCCGATGTAGCTCTCACAGAGGTCACCAAGCTTTTTCGAAGTGACGGTGGTTGAACTCCTAGTGCCCGAGACCTGTGCTGCTTGCTGTGTCCAGTGCGAGCCCTCGAATGTCTCCTATGGTGGGCATCACAGGTCTCCTGGATCTCACTGTTGTGCACAGCAGTGGAGGACTTTGA-----CTTTTTTTTCATTGTTAAGCTACACTCCTCTTTTGGACAGTTCCCTACAGAGAAAGCACGTGAGAAACTCGCCAGAACAGTTCCCACAGACTCTCATTTGCAGAAACTCCTGTGTGCTCAGGTGGACCACACTTGTCTCTCCCACTCCTTCCTGACCACCTCACCACTGGAATAAAGTGACGCTTAACTGCTTCTGAGTCTCCAAATGTATTCTGGATGCTAAGATCTCAAAAAATTTTTTATCACTAAGTAACTCCCTTCCTGCTCAAGCCTCCTTTAAAAGGTTTCTGATTATTTGCCCTTTGGGG-----AAAAACAAACA---AAACAA-----AACAAAACCACCACCAACAACAAAAAACACCAAGATCCTACCTGCTCTGTCTTGGCAGCTCTCCTTGGAACTGGTTGTTCTTTTCCTGCAGTTTCCCTGATATGAGCTGGACTCTGGTTCTGCAGATAAAATGAGCATTTGAGAAAGTGCCTCCAACTGAACACCCTGAAATTCAAATTCCATTCTGGACACTCAGGAGCTGAGGTTACCACCAAACCCCAGCTCTCTTCTGTTCTCCAGTGTCCAAAATCTGTAGGGCCCTGGAAGCCAATAAACTCCCAGTTTCCTTGCCAGGGTAGCCTATGTTGCTGTCCTGTTCCTTCCCACCTTGAAAGATTCAAATCTTACCTGATCTAGCAGTGCTGTTTCCGGCTTTGAGCTTGGTTTTCTCAGAGTTCTCCTC-----------GTTTGGATTGGGCTCTGATCCTACTGCAAAAGAAAGTTTAAGTAACTCACCTCTCCCTAGGCAGAGTCCCATAGTCTATCTCTGATGCATTTGTGTGGA-CAGTCTTCCAAGTGAAGCTCTTTTGCCAGTGTCATGAATGAACACACTTCTCAAAGTCCCCTGAGGACACTAAGCCATTTCTCATCCCCAATCTCAAAATAAAACCCTACCAAAGACACATAGCTCAGTATCCCTGATTCCAGCCCTCCTTCCAGCCTCCACAGAAACAGCCCAAGGGCTTACCTTGACTTTGTATGTGATTCTCACTGGATTGAGAGGAGCTGGTCTTGTCTTTTGTTTTGAATGGTTTCTTCTCATCTGAGCCCTGTTCTGTAAAGGAGATCTGTTGGAAATGGGGCTGGACTGTGGAGCTTTGGATAGAGGAGTAGTGGAGATCGGAGTCTTCATTTCCCCTTCCCATGTTGAAGCTCAAGTGAAAGGTGC---------------------------------------TCTC-----TCTTACACGTCCAAATGCAGAGTGTGGGTTAGTCTGCCGGACTTGCCTTTTATGCCTCCCTCTGCTGGGCGTGGCTTACTCTTATTGGCTGAACGGTTTTCTCCTATCTATTACTTATTAGAGCCTCAATAAG----GTTTCTTACTGTAGTTCTACTGGGGACCCAGCCACAGTTAAAGGGAGACATTTTCAGAATCCTGTCATAGTGTCAAGAAAACAAAGAACCAGGAGCACAGGGATCAGAAGATCAGGGAATCGTTCTTTCTGATTTCTGTCTCAGTTCCTG-TTGCAAGTATTTATGATCCTGTTCATCTTTCAAGATGCAGAATTAGACATACTTATATTGACACATGTTATATATTTTGCACAGAA-AGAATTTATTATACATAGTGTTAAAATTCTATGCTTGAATATTATCATTTATTTAATGCTTGGAAACAACAAATGTCAAATTTTGGTTGACTGTATTAGATTCACACAAATGTGATAAAATGAAAATGCAGAGAAAGACTAAATACCAAATAAAATGGCCCTTCCTACCTTAAATATGAGAAAGATAATTAGATCACATGCAATAAAATTTAA-TGATTAGGTTAGAGCCTATGCTGACCTAATCAGCCCCTTATTTCTGAGGTAGCAAAAAGTCTAGGTAGAAAAACTTGCCCCCTTTCTCACCCTTCCTCAGTCTTCCCAGGAGCACCACTGTGTTGTACGGAATTTATTCAGGCTCCCTTGTATAAATGGACTTGGTTCCAAAT-GGTAACCCAACTGATCACAAGAAAAACAGCCTAGCTTCTGAATATTCAGCTCTCATTTTCACACAGAAGACACCACCTGAATCCCATCAAAGCCCACAGTGTTTTCCAACAACCACCATCAAGATACACTCCAGAGCAGCCTCTCAAAATTGTCTCAGCGAGACAGGACAAGGTGTGGTGGAGCTCCAGGTTCAGAACAGCTGCCTCATCACTTCCTTCTGCG---AAATCTGTCTCTGCTGGTCAGAGCCCTCAAACTATAGAAGGCTTAGTCTATGTCCCAGCAAGAGTTCCCTAAAAGGACCTTCTTGTCTCCCACCCTTCTGAAAAGAGTATTCAGGAATGAGACATTCT--GTTAGGGAGTACTCAGCCTCCAGTCCCAAATGACTTGATTGACTGATGAACTGATTCTCTGAGGAGGAGAAAGACA-GAGGTAGAGACTGTGTTGGGTGAGTCGTTGTTTTCCCAGCTG---------TGCAAATAGTGGAACC----AAAAAAAAAATTAGCGGTGGACAGACACTGACTAATGAAATTGTCTGAATGTAAATTGAAATTATCATAGTAACATTAT----GCATTATAA-----------TATGATATCATATAAAATTTATTTCACCTACAAATACATTTTGAAAGATTACaat---ataatattatataaaattttGTCAGGTAATTTTATTAAAAATCAAGTCAAATTTTGTAACAACATTAACATATAAACTTGATAGAAAGCTAGGAAAATTATCTGCTCTTGTGTAAATGACTGCTTTTTAGCTAACTCTGTAAAAGGTGTGAAGAGAGGTCTGCTACTTACTTGATGAGACATCGACTTCCAAA i calJac3.chr6 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=105853.000000 s hg38.chr3_KI270784v1_alt 127079 138 + 184404 TCCTTGCTGTTTTTAACCAGTGCCCTACCAAGATATGAGAATATTTTACTCTAAGAAAGCATGTTCATAGATACCATAATAGGAATTTTGTTCATTTTAGTTAAATTATTATAACA--TATTGGTTATTAATAGTTTATG s panTro5.chr3 23543 138 - 202621043 TCCTTGCTGTTTTTAACCAGTGCCCTACCAAGATATGAGAATATTTTACTCTAAGAAAGCATGTTCATAGATACCATAATAGGAATTTTGTTCATTTTAGTTGAATTATTATAACA--TATTGGTTATTAATCGTTTATG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 36473 138 + 508821 TCCTTGCTGTTTTTAACCAGTGCCCTACCAAGATATGAGAACATTTTACTCTAAGAAAGCATGTTCATAGATACCATAATAGGAATTTTGTTCATTTTAGTTAAATTATTATATCA--TATTGGTTATTAATAGTTTATG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44688534 138 + 86207423 TCCTTGCTGTTTTTAACCAGTGCCCTCCCAAGATACGAGAATGTTTTACTCTGAGAAAGCATGTTCATAGATACCATAATAGGAATTTTGTTCATTTTAGTTAAATTATTATAACA--TATTGGTTATTAATAGTTTATG i nomLeu3.chr21 C 0 C 0 s calJac3.chr6 130305263 136 - 158406734 TCTTGGCTGTTTTTAACCAGTGCCCTCTCAAGATATGAGAATATTTTACTGAAAGTAACCATTTTCATATATATCATAA---GAATTTTGTTTATTTT-GTTAATAAATTATAACATTTATTGGTTATTAATAGTTTATG i calJac3.chr6 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 18477 445 - 205426864 M a score=2548.000000 s hg38.chr3_KI270784v1_alt 127217 1 + 184404 T s panTro5.chr3 23681 1 - 202621043 T i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 36611 1 + 508821 T i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44688672 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81694410 1 + 180051392 T i rheMac8.chr6 N 0 C 0 s macNem1.NW_012016021v1 17320849 1 - 20287406 T i macNem1.NW_012016021v1 N 0 C 0 s colAng1.NW_012115488v1 3332483 1 + 21726897 T i colAng1.NW_012115488v1 N 0 C 0 s calJac3.chr6 130305399 1 - 158406734 T i calJac3.chr6 C 0 N 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 18477 445 - 205426864 M a score=10407.000000 s hg38.chr3_KI270784v1_alt 127218 6 + 184404 ACTACT s panTro5.chr3 23682 6 - 202621043 ACTACT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 36612 6 + 508821 ACTACT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44688673 6 + 86207423 ACTACT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81694411 6 + 180051392 ACTACC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17320850 6 - 20287406 ACTACC i macNem1.NW_012016021v1 C 0 C 0 s colAng1.NW_012115488v1 3332484 6 + 21726897 ACTACC i colAng1.NW_012115488v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 18477 445 - 205426864 M a score=107288.000000 s hg38.chr3_KI270784v1_alt 127224 42 + 184404 ACTCTCCCCTAAATTTTATTTTGAAATCTCTAGTGTAACAGT s panTro5.chr3 23688 42 - 202621043 ACTCTCCCCTAAATTTCATTTTGAAATCTCTAGTGTAACAGT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 36618 42 + 508821 ACTCTCCCCTAAATTTTATTTTGAAATCTCTAGTGTAACAGT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44688679 42 + 86207423 ACTCTCCCCTAAATTTTATTTTGAAATCTCTAGTGTAACAGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81694417 42 + 180051392 ACTCTCCCCTAAATTTTATTTTGAAATCTCTAGTGTAATAGT i rheMac8.chr6 C 0 I 136 s macNem1.NW_012016021v1 17320856 42 - 20287406 ACTCTCCCCTAAATTTTATTTTGAAATCTCTAGTGTAATAGT i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78951953 42 + 91010382 ACTCTCCCCTAAATTTTATTTTGAAATCTCTAGTGTAATAGT i chlSab2.chr4 N 0 C 0 s colAng1.NW_012115488v1 3332490 42 + 21726897 ACTCTCCCCTAAATTTTATTTTGAAATCTCTAGTGTAATAGT i colAng1.NW_012115488v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 18477 445 - 205426864 M a score=52781.000000 s hg38.chr3_KI270784v1_alt 127266 39 + 184404 CTtccttccttcc----ttccctccctccgtccctccctccct s panTro5.chr3 23730 39 - 202621043 CTtccttccttcc----ttccctccctccgtccctccctccct i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 36660 39 + 508821 CTtccttccttcc----ttccctccctccatccctccctccct i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44688721 43 + 86207423 cttccttcctcccttctttccctccctccatccctccctccct i nomLeu3.chr21 C 0 C 0 s macNem1.NW_012016021v1 17320898 38 - 20287406 AATcctccc-tcc----ctccctccctccctccctcccttcct i macNem1.NW_012016021v1 C 0 I 36 s chlSab2.chr4 78951995 38 + 91010382 AAtccttcc-ttc----cttccttccttccttccttccttcct i chlSab2.chr4 C 0 I 1 s colAng1.NW_012115488v1 3332532 39 + 21726897 AAtccttccttcc----ctccctccctccctccctccctctct i colAng1.NW_012115488v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e rheMac8.chr6 81694459 136 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 18477 445 - 205426864 M a score=3000.000000 s hg38.chr3_KI270784v1_alt 127305 2 + 184404 cc s panTro5.chr3 23769 2 - 202621043 cc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 36699 2 + 508821 cc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44688764 2 + 86207423 cc i nomLeu3.chr21 C 0 C 0 s chlSab2.chr4 78952034 2 + 91010382 cc i chlSab2.chr4 I 1 I 79 s colAng1.NW_012115488v1 3332571 2 + 21726897 cc i colAng1.NW_012115488v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e rheMac8.chr6 81694459 136 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macNem1.NW_012016021v1 17320936 36 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 18477 445 - 205426864 M a score=476.000000 s hg38.chr3_KI270784v1_alt 127307 1 + 184404 c s panTro5.chr3 23771 1 - 202621043 c i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 36701 1 + 508821 t i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44688766 1 + 86207423 c i nomLeu3.chr21 C 0 C 0 s colAng1.NW_012115488v1 3332573 1 + 21726897 c i colAng1.NW_012115488v1 C 0 I 57 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e rheMac8.chr6 81694459 136 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78952036 79 + 91010382 I e macNem1.NW_012016021v1 17320936 36 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 18477 445 - 205426864 M a score=25435.000000 s hg38.chr3_KI270784v1_alt 127308 50 + 184404 --------------CAGTTTAGCCAGAAAGTGTTTAGGTTACACATAAACCATCACTGTAACAA s panTro5.chr3 23772 50 - 202621043 --------------CAGTTTAGCCAGAAAGTGTTTAGGTTACACATAAACCATCACTGTAACAG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 36702 64 + 508821 tacccccgcccCCACAGTTTGGCCAGGAAGTGTTTAGGTTACACATAAACCATCATTGTAACAG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44688767 50 + 86207423 --------------CAGTTTGGCCAGAAAGTGTTTAGGTTACACATAAACCATCACTGTAACAG i nomLeu3.chr21 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3332574 57 + 21726897 I e rheMac8.chr6 81694459 136 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78952036 79 + 91010382 I e macNem1.NW_012016021v1 17320936 36 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 18477 445 - 205426864 M a score=37346.000000 s hg38.chr3_KI270784v1_alt 127358 78 + 184404 TcttccttccttccttccttcctttcttccttccttccttccttccttccttccttccttccttccGtccctccctcc s panTro5.chr3 23822 70 - 202621043 Tcttccttccttccttccttc----cttccttccttccttccttccttccttccttccttccttccG----TCCCTCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 36766 67 + 508821 Actgcctgcctgcctggc-------ctgcctgcctgcctgcctgcctgcctgcctgcctgcctTCCC----TCCCTCC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44688817 66 + 86207423 Tcttccttccttccttc--------cttccttccttccttccttccttccttccttccctccctccc----tccctcc i nomLeu3.chr21 C 0 T 121 s saiBol1.JH378106 16055798 77 - 71252344 tctccctcccttcttccctcccttctttccttcctccctccctcccttcctcccttcctcccttcct-ccttccctcc i saiBol1.JH378106 N 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3332574 57 + 21726897 I e rheMac8.chr6 81694459 136 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78952036 79 + 91010382 I e macNem1.NW_012016021v1 17320936 36 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 18477 445 - 205426864 M a score=2839.000000 s hg38.chr3_KI270784v1_alt 127436 18 + 184404 ctccctccctacccccgc s panTro5.chr3 23892 18 - 202621043 CTCCCTCCCTACCCCTGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 36833 9 + 508821 CTCCCTCCC--------- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44688762 5 + 86207423 ----ctccc--------- i nomLeu3.chr21 T 121 C 0 s saiBol1.JH378106 16055875 18 - 71252344 cttcctccttccctccct i saiBol1.JH378106 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3332574 57 + 21726897 I e rheMac8.chr6 81694459 136 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78952036 79 + 91010382 I e macNem1.NW_012016021v1 17320936 36 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 18477 445 - 205426864 M a score=29502.000000 s hg38.chr3_KI270784v1_alt 127454 57 + 184404 ccCCACAGTTTGGCCAGGAAGTGTTTAGGTTACACATAAACCATCATTGTAACAGCC s panTro5.chr3 23910 51 - 202621043 CCCCACAGTTTGGCCAGGAAG------GGTTACACATAAACCATCATTGTAACAgcc i panTro5.chr3 C 0 C 0 s panPan2.chr3 18928 56 - 205426864 CCCCACAGTTTGGCCAGGAAGTGTTTAGGTTACACATAAACCATCATTGTAACAGc- i panPan2.chr3 M 445 C 0 s gorGor5.CYUI01015884v1 36842 51 + 508821 -----CAGTTTAGCCAGAAAGTGTTTAGGTTACACATAAACCATCATTGTAACAGc- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44688767 52 + 86207423 -----CAGTTTGGCCAGAAAGTGTTTAGGTTACACATAAACCATCACTGTAACAGTc i nomLeu3.chr21 C 0 I 49 s saiBol1.JH378106 16055893 3 - 71252344 -ccc----------------------------------------------------- i saiBol1.JH378106 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3332574 57 + 21726897 I e rheMac8.chr6 81694459 136 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78952036 79 + 91010382 I e macNem1.NW_012016021v1 17320936 36 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=-850.000000 s hg38.chr3_KI270784v1_alt 127511 13 + 184404 AGCCAGCCTGGCT s panTro5.chr3 23961 13 - 202621043 agccagcctggct i panTro5.chr3 C 0 C 0 s panPan2.chr3 18984 2 - 205426864 -----------tt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 36893 2 + 508821 -----------tt i gorGor5.CYUI01015884v1 C 0 C 0 s saiBol1.JH378106 16055896 1 - 71252344 ------------t i saiBol1.JH378106 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3332574 57 + 21726897 I e rheMac8.chr6 81694459 136 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78952036 79 + 91010382 I e macNem1.NW_012016021v1 17320936 36 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44688819 49 + 86207423 I a score=941.000000 s hg38.chr3_KI270784v1_alt 127524 66 + 184404 GcccgccctccctccctccttcccCAGTTTGGCCAGAAAGTG-TTAGGTTACACATAAACCATCATT s panTro5.chr3 23974 16 - 202621043 gcccgcccgccctccc--------------------------------------------------- i panTro5.chr3 C 0 C 0 s panPan2.chr3 18986 16 - 205426864 gccttccttccttcct--------------------------------------------------- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 36895 16 + 508821 gccttccttccttcct--------------------------------------------------- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44688868 67 + 86207423 tccctccctccctccctccctcccCAGTTTGGCCAGAAAGTGTTTAGGTTACACATAAACCATCATT i nomLeu3.chr21 I 49 T 116 s saiBol1.JH378106 16055897 27 - 71252344 tccttccttccttccttccttccttGT---------------------------------------- i saiBol1.JH378106 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3332574 57 + 21726897 I e rheMac8.chr6 81694459 136 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78952036 79 + 91010382 I e macNem1.NW_012016021v1 17320936 36 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=82.000000 s hg38.chr3_KI270784v1_alt 127590 9 + 184404 TTAACAGct s saiBol1.JH378106 16055924 9 - 71252344 TTCTCTGTT i saiBol1.JH378106 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3332574 57 + 21726897 I e rheMac8.chr6 81694459 136 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78952036 79 + 91010382 I e macNem1.NW_012016021v1 17320936 36 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44688935 116 + 86207423 T e panPan2.chr3 19002 0 - 205426864 C e gorGor5.CYUI01015884v1 36911 0 + 508821 C e panTro5.chr3 23990 0 - 202621043 C a score=-701.000000 s hg38.chr3_KI270784v1_alt 127599 2 + 184404 tg s nomLeu3.chr21 44688819 2 + 86207423 tt i nomLeu3.chr21 T 116 C 0 s saiBol1.JH378106 16055933 1 - 71252344 T- i saiBol1.JH378106 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3332574 57 + 21726897 I e rheMac8.chr6 81694459 136 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78952036 79 + 91010382 I e macNem1.NW_012016021v1 17320936 36 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 19002 0 - 205426864 C e gorGor5.CYUI01015884v1 36911 0 + 508821 C e panTro5.chr3 23990 0 - 202621043 C a score=6510.000000 s hg38.chr3_KI270784v1_alt 127601 12 + 184404 ccttccttcctt s nomLeu3.chr21 44688821 12 + 86207423 ccttccttcctt i nomLeu3.chr21 C 0 C 0 s chlSab2.chr4 78952115 12 + 91010382 ccttcctccctt i chlSab2.chr4 I 79 C 0 s saiBol1.JH378106 16055934 12 - 71252344 CCTTCCTTCCTT i saiBol1.JH378106 C 0 I 7 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3332574 57 + 21726897 I e rheMac8.chr6 81694459 136 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macNem1.NW_012016021v1 17320936 36 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 19002 0 - 205426864 C e gorGor5.CYUI01015884v1 36911 0 + 508821 C e panTro5.chr3 23990 0 - 202621043 C a score=2910.000000 s hg38.chr3_KI270784v1_alt 127613 3 + 184404 cct s nomLeu3.chr21 44688833 3 + 86207423 cct i nomLeu3.chr21 C 0 C 0 s chlSab2.chr4 78952127 3 + 91010382 cct i chlSab2.chr4 C 0 C 0 s calJac3.chr2 81049915 3 - 204313951 CCT i calJac3.chr2 N 0 C 0 s saiBol1.JH378106 16055953 3 - 71252344 CCT i saiBol1.JH378106 I 7 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3332574 57 + 21726897 I e rheMac8.chr6 81694459 136 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macNem1.NW_012016021v1 17320936 36 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 19002 0 - 205426864 C e gorGor5.CYUI01015884v1 36911 0 + 508821 C e panTro5.chr3 23990 0 - 202621043 C a score=10294.000000 s hg38.chr3_KI270784v1_alt 127616 3 + 184404 tcc s panTro5.chr3 23990 3 - 202621043 tcc i panTro5.chr3 C 0 C 0 s panPan2.chr3 19002 3 - 205426864 tcc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 36911 3 + 508821 tcc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44688836 3 + 86207423 tcc i nomLeu3.chr21 C 0 I 44 s macNem1.NW_012016021v1 17320972 3 - 20287406 tcc i macNem1.NW_012016021v1 I 36 C 0 s chlSab2.chr4 78952130 2 + 91010382 -cc i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3332631 3 + 21726897 tcc i colAng1.NW_012115488v1 I 57 C 0 s calJac3.chr2 81049918 3 - 204313951 ACC i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16055956 3 - 71252344 TCC i saiBol1.JH378106 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e rheMac8.chr6 81694459 136 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=4500.000000 s hg38.chr3_KI270784v1_alt 127619 1 + 184404 c s panTro5.chr3 23993 1 - 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chr3 19005 1 - 205426864 c i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 36914 1 + 508821 c i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44688883 1 + 86207423 c i nomLeu3.chr21 I 44 C 0 s macNem1.NW_012016021v1 17320975 1 - 20287406 c i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78952132 1 + 91010382 c i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3332634 1 + 21726897 c i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81049921 1 - 204313951 C i calJac3.chr2 C 0 I 1 s saiBol1.JH378106 16055959 1 - 71252344 C i saiBol1.JH378106 C 0 I 1 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e rheMac8.chr6 81694459 136 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=2818.000000 s hg38.chr3_KI270784v1_alt 127620 1 + 184404 t s panTro5.chr3 23994 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 19006 1 - 205426864 t i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 36915 1 + 508821 t i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44688884 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s macNem1.NW_012016021v1 17320976 1 - 20287406 t i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78952133 1 + 91010382 t i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3332635 1 + 21726897 t i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81049923 1 - 204313951 C i calJac3.chr2 I 1 C 0 s saiBol1.JH378106 16055961 1 - 71252344 C i saiBol1.JH378106 I 1 C 0 s cebCap1.NW_016107331v1 5389439 1 + 12262279 T i cebCap1.NW_016107331v1 N 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e rheMac8.chr6 81694459 136 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=348542.000000 s hg38.chr3_KI270784v1_alt 127621 75 + 184404 ccctccCCAGTTTGGCCA-GAAAGTGTTTAGGTTACAC--ATAAACCATCACTGACTAGAGACTGTT-ATTTGAATTTA s panTro5.chr3 23995 76 - 202621043 ccttcccCAGTTTGGCCA-GAAAGTGTTTAGGTTACAC--ATAAACCATCACTGACTACAGACTGTTCATTTGAATTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 19007 76 - 205426864 ccctccCCAGTTTGGCCA-GAAAGTGTTTAGGTTACAC--ATAAACCATCACTGACTAGAGACTGTTTATTTGAATTTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 36916 76 + 508821 ccctccCCAGTTTGGCCA-GAAAGTGTTTAGGTTACAC--ATAAACCATCACTGACTAGAGACTGTTCATTTGAATGTA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44688885 76 + 86207423 ccctcccCAGTTTGGCCA-GAAAGTGTTTAGGTTACAC--ATAAACCATCATTGACTAGAGACTGTTCATTTGAATTTA i nomLeu3.chr21 C 0 C 0 s macNem1.NW_012016021v1 17320977 70 - 20287406 tcctcccCAGTTTGGCCA-GAAAGTGTTTAGGTTACAA--TTAAACCATCATTGACTAGAGACTCTTCATTAG------ i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78952134 78 + 91010382 tcctcccCAGTTTGTCCA-GAAAGTGTTTAGGTTACAATTTTAAACTATCATTGACTAGAGATTGTTCATTTAAATTTA i chlSab2.chr4 C 0 I 1 s colAng1.NW_012115488v1 3332636 76 + 21726897 tcctccctAGTTTGGCCA-GAAAGTGTTTAGGTTACAA--TTAAACCATCATTGACTAGAGATTGTTCATTTAAATTTA i colAng1.NW_012115488v1 C 0 I 1 s calJac3.chr2 81049924 77 - 204313951 CCCTCCCCAGTTTGGCCATGACAGCGTTTAGGTTAGTA--TTAAACCGTCATTGACTATAGACTATTCAGCTGAATTTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16055962 76 - 71252344 CCCTCCCCAGTTTGGCCA-GACAGTGTTTAGGTTACTA--TTAAACCATCATTGACTACAGACTGTTCAGCTGAATTTA i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5389440 68 + 12262279 CCCTCCCCAGTTTGGCCA-GACAGTGTTTAGGTT----------ACCATCATTGACTACAGACTGTTCAGCTGAATTTA i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4061673 76 + 15889662 ccctcccCAGTTTGGCCA-GACAGTGTTTAGGTTACTA--TTAAACCATCATTGACTACAGACTGTTTGGTTGAATTTA i aotNan1.NW_018506370v1 N 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e rheMac8.chr6 81694459 136 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=8077091.000000 s hg38.chr3_KI270784v1_alt 127696 1374 + 184404 GGTGATGCCCTATGTCTATTCACAGTGTGTGTAGATATTTAAAATTACACTCAGCTTGGGAGAAAAGAACATTGAGTAGTGGG-AAAAAGTCTCACCCACAGCTGTTATACAAATGTACAGACAAATGTCTGGAGAAGATAGCA------TGTTTTCAAATATTTTCGTCTCTTTGTCAGTCTCTGCCAAATAGACCCTCAGGGGCTCTCTCTGTCTCTTGGATGAACACTCTCCTGAGGGCTTG------GAGACATCCACAGTATGAGTTAACCACCCACTGCAGATTTAATAAATGTTCAAA-TAAATGAGATTGAATGAAAAATAAAACACCTCAATCTGACTGTTCTTTTATGCTTTTCTCCCAGATGTGCACTGATCCATTACTTACAACAAACTTGGACTATAAATTCTTGCATTTGTACATGCTGGG-AGTTCTGTGAGTCAGACTTCACCTGAATAATTCTAAGAGTATCTTGGGGGTAAAAGAGAT--GAAAAATTACATGTTCTTCTGGAGACTAGTATTGTATCAGTTATTATTACTGGACTTCATTCTCCCTCTACCAGTTTGTCCCC-GTGACCa-tttttattacacaattgttattattattattTAACTTTCTGAGTACTAAGTGTGTGCTATGGCGTAGTACGTGACGCAAATAAGACATCCTTCTTTCTCGGGGTTTCCAATGTAAGTCATCAAGTTCAATATTTAGTCATTAGTGTTCTTTTATGTatacacatacaagtacacacac-----tacacaaatacatataagtataaatatagatgtatctataccaataagttaaataATTGCCAACTCATGCACTACTTCTCTGCCTAAAAAGGACAA---TTTTTT---AAAAAGC-ATAT--GACAAGTCTTTATTTAATAGCAATTTTAAATCACAGAAACTA-TTTTTATATTTCTATTTTTTATACAGAATTCAAAGTAATTAAAGAATTTCATGATTTTTCTCTACAGATGGCCTTTGGTGCTACTACCACAT------ATTACCAAAGTGTCTCATCTACCAGACGGTCTCCTCTGATCGTTTAAAACTAGAAAAC--------TGGACAACGCAAAGGCTTTAGCAGATAACTGAAGTGGACTGGTAAACTAATACACGTGAACTTCATAGAATTTGGATCTAGATTGAATCTCTATCAAGACTGTTAGAGGAGGGATATTTGTATAATTGGTTAATAGACCAAGAAAAGACACCATTTGGTAGAGCTTTTACACATTAATTGGCTAGTACAGGGGCTCATGTGAGGTGTGTGTGCCCAAAGGCATGTTTTATTTTCCTGGTA---ATTAGTAGGGTCAAATGGACTTTATTAAAACTAGTCTAAATGTCAGGCAAGCAAAGAGAAGTAGTGGGTCTTGTGATTAT s panTro5.chr3 24071 1374 - 202621043 GGTGATGCCCTATGTCTATTCACAGTGTGTGTAGATATTTTAAATTACACTCAGCTTGGGAGAAAAGAACATTGAGTAGTGGG-AAAAAGTCTCACCCACAGCTGTTATACAAATGTACAGACAAATGTCTGGAGAAGATAGCA------TGTTTTCAAATATTTTCATCTCTTTGTCAGTCTCTGCCAAATAGACCCTCAGGGGCTCTCTCTGTCTCTTGGATGAACACTCTCCTGAGGGCTTG------GAGACATCCACAGTATGAGTTAACCACCCGCTGCAGATTTAATAAATGTTCAAA-TAAATGAGATTGAATGAAAAATAAAACACCTCAATCTGACTGTTCTTTTATGCTTTTCTCCCAGATGTGCACTGATCCATTACTTACAACAAACTTGGACTATAAATTCTTACATTTGTCTATGCTGGG-AGTTCTGTGAGTCAGACTTCACCTGAATAATTTTAAGAGTATCTTGGGGGTAAAAGAGAT--GAAAAATTACATGTTCTTCTGGAGACTAGTATTGTATCAGTTATTATTACTGGACTTCATTCTCCCTCTAGCAGTCTGTCCCC-GTGACCa-tttttattacacaattgttattattattattTAACTTTCTGAGTACTAAGTGTGTGCTATGGTGTAGTACGTGATGCAAATAAGACATCCTTCTTTCTCGGGGTTTCCAATGTAAGTCATCAAGTTCAATATTTAGTCATTAGTGTTCTTTTATGTatacacatacaagtacacacac-----tacacaaatacatataagtacaaataTAGATGTATCTATACCAATAAGTTAAATAATTGCCCACTCATGCACTACTTCTCTGCCTAAAAAGGACAA---TTTTTT---AAAAAGC-ATAC--GACAAGTCTTTATTTAATAGCAATTTTAAATCACAGAAACTA-TTTTTATATTTCTATTTTTTATACAGAATTCAAAGTAATTAAAGAATTTCATGATTTTTCTCTATAGATGGCCTTTGGTACTACTACCACAT------ATTACCAAAGTGTCTCATCTATCAGACAGTCTCCTCTGATCGTTTAAAACTAGAAAAC--------TGGACAACGCAAAGGCTTTAGCAGATAACTGAAGTGGACTGGTAAACTAATACACATGAACTTCATAGAATTTGGATCTAGATTGAATCTCTATCAAGACTGTTAGAGGAGGGATATTTGTATAATTGGTTAATAGACCAAGAAAAGACACCATTTGCTAGAGCTTTTACACATTAATTGGCTAGTACAAGGGCTCATGTGAGGTGTATGTGCCCGAAGGCATGTTTTATTTTCCTGGTA---ATTAGTAGGGTCAAATGGACTTTATTAAAACTAGTCTAAATGTCAGGCAAGCAAAGAGAAGTAGTGGGTCATATGGTTAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 19083 1374 - 205426864 GGTGATGCCCTATGTCTATTCACAGTGTGTGTAGATATTTTAAATTACACTCAGCTTGGGAGAAAAGAACATTGAGTAGTGGG-GAAAAGTCTCACCCACAGCTGTTATACAAATGTACAGACAAATGTCTGGAGAAGATAGCA------TGTTTTCAAATATTTTCATCTCTTTGTCAGTCTCTGCCAAATAGACCCTCAGGGGCTCTCTCTGTCTCTTGGATGAACACTCTCCTGAGGGCTTG------GAGACATCCACAGTATGAGTTAACCACCCACTGCAGATTTAATAAATGTTCAAA-TAAATGAGATTGAATGAAAAATAAAACACCTCAATCTGACTGTTCTTTTATGCTTTTCTCCCAGATGTGCACTGATCCATTACTTACAACAAACTTGGACTATAAATTCTTGCATTTGTCTATGCTGGG-AGTTCTGTGAGTCAGACTTCACCTGAATAATTTTAAGAGTATCTTGGGGGTAAAAGAGAT--GAAAAATTACATGTTCTTCTGGAGACTAGTATTGTATCAGTTATTATTACTGGACTTCATTCTCCCTCTACCAGTCTGTCCCC-GTGACCa-tttttattacacaattgttattattattattTAACTTTCTGAGTACTAAGTGTGTGCTATGGTGTAGTACGTGACGCAAATAAGACATCCTTCTTTCTCGGGGTTTCCAATGTAAGTCATCAAGTTCAATATTTAGTCATTAGTGTTCTTTTATGTatacacatacaagtacacacac-----tacacaaatacatataagtacaaataTAGATGTATCTATACCAATAAGTTAAATAATTGCCAACTCATGCACTACTTCTCTGCCTAAAAAGGACAA---TTTTTT---AAAAAGC-ATAC--GACAAGTCTTTATTTAATAGCAATTTTAAATCACAGAAACTA-TTTTTATATTTCTATTTTTTATACAGAATTCAAAGTAATTAAAGAATTTCATGATTTTTCTCTATAGATGGCCTTTGGTACTACTACCACAT------ATTACCAAAGTGTCTCATCTATCGGACAGTCTCCTCTGATCGTTTAAAACTAGAAAAC--------TGGACAACGCAAAGGCTTTAGCAGATAACTGAAGTGGACTGGTAAACTAATACACATGAACTTCATAGAATTTGGATCTAGATTGAATGTCTATCAAGACTGTTAGAGGAGGGATATTTGTATAATTGGTTAATAGACCAAGAAAAGACACCATTTGGTAGAGCTTTTACACATTAACTGGCTAGTACAGGGGCTCGTGTGAGGTGTATGTGCCCGAAGGCATGTTTTATTTTCCTGGTA---ATTAGTAGGGTCAAATGGACTTCATTAAAACTAGTCTAAATGTCAGGCAAGCAAAGAGAAGTAGTGGGTCATATGGTTAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 36992 1371 + 508821 GGTGATGCCCTATGTCTATTCACAGTGTGTGTAGATATTTAAAATTACACTCAGTTTGGGAGAAAAGAACATTGAGTAGTGGG-AAAAAGTCTCACCCACAGCTGTTATACAAATGTACAGACAAATGTCTGGAGAAGACAGCA------TGTTTTCAAATATTTTCATCTCTTTGTCAGTCTCTGCCAAATAGACCCTCAGGGGCTCTCTCTGTCTCTTGGATGAACACTCTCCTGAGGGCTTG------GAGACATCCACAGTATGAGTTAACCATCCACTGCAGATTTAATAAATGTTCAAA-TAAATGAGAT----TGAAAAATAAAGCACCTCAATCTGACTGTTCTTTTATGCTTTTCTCACAGATGTGCACTGGTCCATTACTTACAACAAACTTGGACTATAAATTCTTGCATTTGTGTATGCTGGG-AGTTCTGTGAGTCAGACTTCACCTGAATAATTTTAAGAGTATCTTGGGGGTAAAAGAGAT--AAAAAATTACATGTTCTTCTGGAGACTAGTATTGTATCAGTTATTATTACTGGACTTCATTCTACCTCTACCAGTCTGTCCCT-GTGACCa-tttttattacacaattattattattattattTAACTTTCTGAGTACTAAGTGTGTGCTATGGTGTAGTACGTGACGCAAATAAGACATCCTTCTTTCTCGGGGTTTCCAATGTAAGTCATCAAGTTCAATATTTAGTCATTAGTGTTCTTTTATGTatacacatacaagtacacacac-----tacacaaatacatataagtacaaataTAGATGTATCTATACCAATAAATTAAAT-ATTGCCAACTCATGCACTACTTCTCTGCCTAAAAAGGACAA---TTTTTT---AAAAAGC-ATACATGACAAGTCTTTATTTAATAGCAACTTTAAATCACAGAAACTA-TTCTTATATTTCTACTTTTTATACAGAATTCAAAGTAATTAAAGAATTTCATGATTTTTCTCTATAGGTGGCCTTTGGTACTACTACCACAT------ATTACCAAAGTGTCTCATCTATCGGACAGTCTCCTCTGATCGTTTAAAACTAGAAAAC--------TGGACAACGCAAAGGCTTTAGCAGATAACTGAAGTGGACTGGTAAACTAATACACATGAACTTCATAGAATTTGGATCTAGATTGAATGTCTATCAAGACTGTTAGAGGGGGGATATTTGTATAATTGGTTAATAGACCAAGAAAAGACACCATTTGGTAGAGCTTTTACACATTAATTGGCTAGTACAGGGGCTCATGTGAGGTGTATGTGCCCAAAGGCATGTTCTATTTTCCTGGTA---ATTAGTAGGGTCAAATGGACTTTATTAAAACTAGTCTAAATGTCAGGCAAGCAAAGAGAAGTAGTGGGTCATATGGTTAT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44688961 1358 + 86207423 GGTGATGCCCTATGTCTATTCACAGTGTGTGTAGATACTTAAAATTACACTCAGCTTGGTAGAAAAGAACATTGAGTAGTGGG-AAAAAGTCTCACCCACAGCTGTTATACAAATGTACAGAC-AATGTCTGGAGAAGAGAGCA------TGTTTTCGAATATTTTCATCTGTTTGTCAGTCTCTGCCAAATAGACCCTCAGGGG----CTCTGTGTCTTGGATGAACACTCCCCTGAGGGCTTG------GAGACATCCACAGTATGAGTTAACCACCCACTGCAGATTTAATAAGTGTTCAAA-TAAATGAGATTGAATGAAAAATAAAACACCTCAATCTGACTGTTCTTTTATGCTTTTCTCCCAGATGTGCACTGATCCATTACTTAGAACAAACTTGGACTATAAATTCTTGCATTTATATATGCTGGG-AGTTCTGTGAGTCAGACTTCCCCTGAATAATTTTAAGAGTATCTTGGGGGTAAAAGAGAT--GAAAAATTACATGTTCTTCTGGAGACTAGTATTGTATCAGTTATTATTACTGGACTTCATTCTCCTTCTACCAGTCTCTCCCCTGTGACCa-tttttattacacaattgttattattattattTAACTTTCTGAGTACTAAGTGTGTGCTATGGTGTAGTACGTGACGCAGATAAGACATCCTTCCTTCTCGGGGTTTCCAATGTAAGTCATCAAGTTCAATATTTAGTCATTAGTGTTCTTTTATGTatacacatacaagtacacacac-----tacaca---------aagtacaaataTAGATGTATCTATGCCAATAAATTAAATAACCGCCAACTCATGCACTA-TTCTCTGCCTAAAAAGGACAAT--TTTTTT---AAAAAGC-ATACATGACAAGTC----TTTAATAACAATTTTAAACCACAGAAACTA-TTTTTATATTTCTATTTTTTATACAGAATTCAAAGTAATTAAAGAATTTCGTGATTTTTCTCTATAGATGGCCTTTGGTACTA----CACAT------ATTACCAAAGTGCCTCATCTATCGGACGGTCTCCTCCGAGCGTTTAAAACTAGAAAAC--------TGGACAACGCAAAGGCTTTAGCAGATAACTGAAGTGGACTGGTAAACTAATACACATGAACTTCATAGAATTTTGATCTAGACTGAATGTCTATCAAGACTGTTAGAGGAGGAGTATTTGTATAATTGATTAATAGACCAAGAAAAGACACCATTTGGTAGAGCTTTTACACATTAATTGGCTAGTACAGGGGCTCATGTGAGGTGTATGTGCCCAAACGCATGTTTTCTTTTCCTAGTATAGATTAGTAGGGTCAAACGGACTTTATTAAAACTAGTCTAAATGTCAGGCAAGCAAAGAGAAGTGGTGGGTCATATGGTTAT i nomLeu3.chr21 C 0 I 308 s rheMac8.chr6 81694595 1393 + 180051392 GGTGATGCCCTGTGTCTATTCATGGTGTATGTAGATATTTAAAATTACCCTCAGCTTGAGAGAAAAGGACATTGGGTAGCAGG-AAAAAGTCTCACCCACAGTCGTTATACAAATGTACAGACCAATGTCTGGAGAAGATAGCA------T-TTTTCAAATATTTTCATCTCTTTGTCAGTCTCCGCTAAATAGACCCTCAGGGGCTCTCGCTGTCTCTTGGATGAACACTCTCCTGAAGGCTTG------GAGACGTCCACCATATGAGTTAGCCACTCACTGCAGATTTAAGGAATGTATAAA-GAAATGAGATTGAATGGAAAATAAAACACCTCAATCTGACTGTTCTTTGTTGCTTTTCTCCCAGATGTGCGCTGACCCATTACTTATAACAGACTTAGACTATAAATTCTTGCATTTATGTATGCTTAG-AGTTCTGTGAGTCAAACTTTGCCTGAATAATTTTAAGAGTCTCATGGGGGTAAAAGAGAT--GAAAAATTACATGTTCTTCTGGAGTCAAGTATTGTATCAGTTATTATTACTGGACTTCATTCTCCTGCTGCCAGTCTCTCCCCTGTGACCATTTTTTGTTACACAATTGTTATTATTGTTATTTAACTTTCTGAGTACTAAGTGTGTGCTGTGGTACAGTACATGACAAAAATAATACATTATTCCTTCTCAGGGTTTGCAATGTAAGTAATCAAGTTCAATATTTAGTCATTAGTGTTCTTTTATGTTtacacatacaggtacacacac-----tacacaaatacatataaatacaaatatatatgtatctatatcaatacatCAATTAATTGACAACTCATACACTACTTCTTTACCTAAAAAGGACAATTATTTTTTAAGAAAAAGC-ATATATGACAAGT----ATTTAATAGCAATTTTAAATCACAGAAACTA-TTTTTCTATTTCTATTTTTCATTCAGAATTCAAACTAATTAAAGAATTTCATGATTTTTCTCTATAGATGGGCTTTGGCACTACTACCACATCTTACCCTTACCCAAATGCCTCATCTATTGACCAGTCTCCTCTGAAAGTTTAAAACTAGAAAACTCCTCACATGGACAACGCAAAGGCTTTAGCAGATAATTGACGTGGAGTGGTAAACTAATACACATGAATTTCATAGAATTTAGATCTAGATTGAATGTCTATCAAGGCTATTAGAGGAAGAGTATTTGTATGATTATTTAATAAACCAAGAAAATACACCATTTGATAGAGCTTTTACACATTAATTGGCTAGTACAGGAGCTCATGTGAGGTGTATGTGCCCAAAGGCATGCTTTATTTTCATGGTA---ATTAGTAGGGTCAAATGGACTTTACTAAAACTAGTCTAAATGTGAGGCAAGCAAAGAGAAGTAGTAGGCCATATGGTTAC i rheMac8.chr6 I 136 C 0 s macNem1.NW_012016021v1 17321047 1391 - 20287406 GGTGATGCCCTGTGTCTATTCATGGTGTATGTAGATATTTAAAATTACCCTCAGCTTGAGAGAAAAGGACATTGGGTAGCAGG-AAAAAGTCTCACCCACAGTCGTTATACAAATGTACAGACCAATGTCTGGAGAAGATAGCA------T-TTTTCAAATATTTTCATCTCTTTGTCAGTCTCCGCTAAATAGACCCTCAGGGGCTCTCGCTGTCTCTTGGATGAACACTCTCCTGAAGGCTTG------GAGACGTCCACCATATGAGTTAGCCACTCACTGCAGATTTAATGAATGTATAAA-GAAATGAGATTGAATGGAAAATAAAACACCTCAATCTGACTGTTCTTTGTTGCTTTTCTCCCAGATGTGCGCTGACCCATTACTTATAACAGACTTAGACTATAAATTCTTGCATTTATGTATGCTTGG-AGTTCTGTGAGTCAAACTTTGCCTGAATAATTTTAAGAGTCTCATGGGGGTAAAAGAGAT--GAAAAATTGCATGTTCTTCTGGAGTCAAGTATTGTATCAGTTATTATTACTGGACTTCATTCTCCTGCTGCCAGTCTCTCCCCTGTGACCATTTTTTGTTACACAATTGTTATTATTGTTATTTAACTTTCTGAGTACTAAGTGTGTGCTGTGGTACAGTACATGACAAAAATAAGACATTATTCCTTCTCAGGGTTTGCAATGTAAGTAATCAAGTTCAATATTTAGTCATTAGTGTTCTTTTATGTTtacacatacaggtacacacac-----tacacaaatacatataaatacaaatatatatgtatctatatcaatacatCAATTAATTGACAACTCATACACTACTTCTTTACCTAAAAAGGACAATT-TTTTTTAAGAAAAAGC-ATATATGACAAGT----ATTTAATAGC-ATTTTAAATCACAGAAACTA-TTTTTCTATTTCTATTTTTCATTCAGAATTCAAACTAATTAAAGAATTTCATGATTTTTCTCTATAGATGGGCTTTGGCACTACTACCACATCTTACCCTTACCCAAATGCCTCATCTATTGACCAGTCTCCTCTGAAAGTTTAAAACTAGAAAACTCCTCACATGGACAACGCAAAGGCTTTAGCAGATAATTGACGTGGAGTGGTAAACTAATATACATGAATTTCATAGAATTTAGATCTAGATTGAATGTCTATCAAGGCTATTAGAGGAAGAGTATTTGTATGATTATTTAATAAACCAAGAAAATACACCATTTGATAGAGCTTTTACACATTAATTGGCTAGTACAGGAGCTCATGTGAGGTGTATGTGCCCAAAGGCATGCTTTATTTTCATGGTA---ATTAGTAGGGTCAAATGGACTTTACTAAAACTAGTCTAAATGTGAGGCAAGCAAAGAGAAGTAGTAGGCCATATGGTTAC i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78952213 1387 + 91010382 GGTGATGCCCTGTGTCTATTCATGGTGTATGTAGATATTTAAAATTACCCTCAGCTTGAGAGAAAAGGACATTGAGTAGCAGG-AAAAAGTCTCACCCACAGTCATTATACAAATGTACAGACCAATGTCTGGAGAAGATAGCA------TATTTTCAAATATTTTCATCTCCTTGTCAGTCTCCGCCAAATAGACCCTCAGGGGCTCTCGCTGTCTCTTGGATGAACACTCTCCTGAAGGCTTGTGTTATGAGTTAGCCACCATATGAGTTAGCCACTCACTGCAGATTTAATAAATGTATAAATTAAATGAGATTGAAGGGAAAATAAAACACCTCAATCTGACTGTTCTTTGTTGCTTTTCTCCCAGATGT--TCTG--CCATTACTTACAACAAACTTAGACTATAAATTCTTGCATTTATGTATGCTTGG-AGTTCTGTGAGTCAGACTTTGCCTGAATAATTTTAAGAGTCTCATGGGAGTAAAAGAGAT--GAAAAATTACATGTTCTTCTGGAGTCAAGTATTGTATCAGTTATTATTACTGGACTTCATTCTCCTGCTACCAGTCTCTCCCC-GTGACCA-TTTTTATTACACAATTGTTATTATTGTTATTTAACTTTCTGAGTTCTAAGTGTGTGCTATGGTACATTACATGACAAAAATAAGACATTATTCCTTCTCAGGGTTTGCAGTGTAAGTAACCAAGTTCAATATTTAGTCATTAGTGTTCTTTTATGTTtacacatacaggtacacacac-----tacacaaatacatgtaagtacaaataTATATGTATCTATACCAATAAATCAATTAATTGACAACTCATACACTACTTCTTTACCTAAAAAGGACAAT--TATTTTAAGAAAAAGC-ATATATGACAAGT----ATTTAATAGCAATTTTAAATCACAGAAACTA-TTTTTCTATTTCTATTTTTCATATAGAATTCAAACTAATTAAAGAATTTCATGATTTTTCTCTATAGATGGGCTTTCGCACTACTACCACAT------CTTACCCAAATGCCTCTTCTATTGACCAGTCTCCTCTGATAGTTTAAAACTAGAAAACTCCTCACATGGACAATGCAAAGGCTTTAGCTGATAATTGACGTGGAGTGGTAAACTAATATACATGAATTTCATAGAATTTAGATCTAGATTGAATGTCTATCAAGGCTATTAGAGGAAGAGTATTTGTATGATTATTTAATAGACCAAGAAAATACACCATTTGATAGAGCTTTTACACATTAATTGGCTAGTACAGGAGCTCATGTGAGGTGTATGTGCCCAAAGGCATGCTTTATTTTCATGGTA---ATTAGTAGAGTCAAATGGACTTTACTAAGACTAGTCTAAATGTGAGGCAAGCAAAAAGAAGTAGTAGGCCATATGGTTAT i chlSab2.chr4 I 1 C 0 s colAng1.NW_012115488v1 3332713 1382 + 21726897 GGTGATGCCCTGTGTCTATTCATGGTGTATGTAGATATTTAAAATTGCCCTCAGCTTGAGAGAAAAGGACATTGAGTAGCAGG-AAAAAGTCTCACCCACAGTCATTATATAAATGTACAGACCAATGTCTGGAGAAGATAGCA------TGTTTTCAAATATTTTCATCTCTTTGTCAGTCTCCACTAAATAGACCTTCAGGGGCTCTCGCTGTCTCTTGGATGAATACTCTCCTGAAGGCTTG------GAGACGTCCACCATATGAGTTAGCCACTCACTGCAGATTTAATAAATGTACAAATTAAATGAGATTGAATGGAAAATAAAACACCTCAATCTGACTGTTCTTTGTTGCTTTTCTCCCAGATGTTCACTGACCCATTGCTTACAACAAACTTAGACTATAAATTCTTGCATTTATGTATGCTTGG-A-----GTGAGTCAGACTTTGCCTGAATAATTTTAAGAGTCTCTTGGGAGTAAAAGAGAT--GAAAAATTACATGTTCTTCTGGAGTCTAGTATGGTATCAGTTATTATTACTGGACTTCATTCTCCTGCTACCAGTCTCTCCCCTGTGACCA-TTTTTATTACACAATTGTTATTATTATTGTTTAACTTTCTGAGTACTAAGTGTGTGCTATGGTACAGTACATGACAAAAATAAGACATTATTCCTTCTCAGGGTTTGCAATGTAAGTAATCAAGTTCAATATTTAGTCAGTAGTGTTCTTTTATGTTTACACATACAGGTACACACAC-----CACACAAatatatataagtacaaatatatatgtatctataCCAATACATCAATTAATTGACAACTCATACACTACTTCTTTACCT-AAAAGGACAATTTTTTCTTAAGAAAAAGC-ATATATGACAAGT----ATTTAATAGCAATTTTAAATCACAGAAACTA-TTTTTCTATTTCTGTTTTTCATACAGAATTCAAACTAATTAAAGAATTTCATGATTTTTCTCTATAGATGGGCTTTGGCACTACTAACACAT------CTTACCCAAATGCCTCATCTATTGACCAGTCTCCTCTGATAGTTTAAAACTAGAAAACTCCTCACGTGGACAACGCAAAGGCTTTAGCAGATAATTGACATGGAGTGGTAAACTAATATACATGAATTTCATAGAATTTAGATCTAGATTGAATGTCTATCAAGGCTATTAGAGGAAGAGTATTTGTATGATTATTTAATAGACCAAGAAAATCCACCATTTGATAGAGCTTTTACACATTAATTGGCTAGTACAGGGGCTCATGTGAGGTGTCTGTGCCCAAAGGCATGCTTTATTTTCATGGTA---ATTAGTAGGGTCAAATGGACTTTACTAAAACTAGTCTAAATGTGAGGCAAGCAAAGAGAAGTAGTAGGCCATATGGTTAT i colAng1.NW_012115488v1 I 1 C 0 s calJac3.chr2 81050001 1376 - 204313951 GGTGATGCCCTATGTCTATTCATAGTGTGTGTCGATATTTAAAATTACATTCAGCTTGGGAGAAAAGGACTCTGAGCAGCAGGGAAAAAGTCTCACCCACAGCTGTTACACAAATGTAAAGACTAATGTGTGGAGAAGACAGCATGTTTTTGTTTTCAAATGTTTTCATCTCTTTGTCAGTCTCCACCAAATAGACCCTCAGGGGCTCTCACTGTCTCTTGGATGAACACTCTCCTGAAGGCTTA------GAGACATCCACAGTATGAGTTATCCATCCACTGCAGATTTAATAAATGTACAAA-TAAATGAGATTGAATGAAAAATAAAACACCTCAATCTGATTGTTCTTTTATGCTTTTCTCCCAGTTGTGCACTGACCCATTACTTACGA-AAACTTAGACTATAAATGTTTGCATTTATTTATGCTTAG-AGGTCTGTGAATCAGACTTCATCTGGTTAATTTTAAGAGTCTCTTGGGGGTAAAAGAGAT--AAAAAATTATGTGTTCTTCTGGAGACTAGTATTGTATCATTTATTATCACCGGACGTCATTCTCCTGCTACTAGTCTCTTCTCTGTGACCA-TTTTTATTACACGATTGTTA------TTATTTAACTTGCTAAGTACTAAGGGTGTGCTATGGTACAGTACGTGACACAAATAAGACATCATTCCTTCTCTAGGTGTGCAGTGTAAGTAATCAAGTTTCATATTTAGTCATTAGTGTTCTTTTTTGCATA-ATATACAAGTGCACACAC-----TACACAAACACAAATAAGTACAAATATATATGTATCTATACCAATACATTAAATACTTGCCAATGCATGCAATACTTATCTGCCTAAAAAGAACA----TTTTTTTAAAAAAAGGCATGTGTGACAAGT----ATTTAATAGCAATTTAAAATCACATAAACTA-TTTTTCT------ATTTTTTATACAAAATTCAAACTAAGTTTTAAAATTTATGATTTTCCTCTATAGACAGCCTTTGGCACTACTACCACAT------ATTACCAAAGTGCCTCATCTATCGAACAGTTTTCTCTCATAGTTTAAAACCAGAAAACTCCTCACATGGAAAATTTAAAGACTTTAGCAGATAACTGAAATGGAGTGGTAAACCAATATACATGAATTTCATAGAATTTGGATCTAGATTGAGTGTCCTTCAAGGCTGTTAGAGGAAGAGTATTTGTATAATTGGTTAATAGATCAAGAAAATACACCATTTGGTAGAGCTTTTACATGTTGTTTGGCTAATACAGGAACT-ATCTGTGGTGTATTTGCCCAGAGGCAAGCTTTATTTTCATGGTA---ATTAGTAGGGTCAAATGGACTTTATTAAAACTAGTCTAAATGTGAGGCAAGCAAAGAGAAGTAGTGGGCCATATGGTTAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16056038 1371 - 71252344 GGTGATGCCCTATGTCTATTCATAGTGTGTGTTG-TATTGAAAATCACACTCGGCTTGGGAGAAAAGGACATTGAGTAGCAGGAAAAAAGACTCACCCACAGCTGTTACAC-AATGTAAAGACTAATGTGAGAAGAAGATAGCA------TGTTTTCAAATGTTTTCATCTCTTTGTCAGTCTCTGCCAAATACACCCTCAGGGGCTCTCACTGTCTCTTGGATGAACACTCTCCTGAAGGCTTG------GAGACATCCACAGTATGAGTTAGCCACCCACTGCAGATTTAATAAATGTACAAA-TAAAAGAGATTGAATGAAAAATAAAACACCTCAATCTGACTGTTCTTTTATGCTTTTCTCCCAGATGTGCACTGACCCATTACTTACAA-AAACTTAGACTATAAATTCTTGCATTTATAAATACTTAG-AAGTCTGTGAGTCAAACTTCATCTGGTTAATTTTAAGAGTCTCTTGGGGGTAAAAGAGAT-AAAAAAATTACATGTTTTTCTGGAGACTAGTATTGAATCATTTATTATTACTGGACTTCATTCTCCTGCTACTAGTCTCTTCTCTGTGACCA-TTTTTATTACACAATTGTTA------TTATTTAACTTGCTGAGTACTAAGTGTGTGCTATGGTGCAGTACATGACACAAATAAGACATCATTCCTTCTCAGGGATGGCAGTGAATGTAATCAAGTTTAATATTTAGTCATTAGTTTTCTTTTATGCATACACATACAAGTGCACACAC-----TACACAGACACAAATAAGTACAAATATATATGTATCTTTACCAATAAATTAAATACTTGCCAACACATGCAATACTTAGCTGCCTAAAAAGAACA----TTTTTTTAAAAAAAGA-ATGTATGACAAGT----ATTTAATAGCAATTTTAAATCACATAAACTATTTTTTCT------ATTTTTAATAGAAAATCCAAACTAATTTTAAAAATTGATGATTTTCCTCTATAGACGGCCTTTGTCACTACTACCACAT------ATTACCAAGGTGCCTCATCTATTGAGTGGTTTTCTCTCATAGTTTAAAACAAGAAAACTCCTCACATGGAGAATTTACAGGCTTTAGCAGATAATTGAAGTAGAGTGGTAAACTAATATATATGAATTTCATAGAATTTGGATCTAGATTGAATGTCCTTCAAGGCTGTTAGAGGAAGAGTATTTGTGTAATTGGTTAATAGACCAAGAAAAGACACCATTTGGTAGAGCTTTTACATATTATTTGGCTAGCACAGGAGCTCATTTGCGGTGTATTTGCCCAAAGGCAAGCTTTATTTTCATGGTA---ATGAGTAGAGTCAAATGGACTTTATTAAAACTAGTCTAAATGTGAGGCAGGCAAAGAGAAGTCATAGGCCATATGGTTAT i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5389508 1369 + 12262279 GATGTTGCCCTTTTTCTATTCATA--GTGTGTCAATATTTGCAATTATGCTCAGCTTGGGAGAAAAGGACATTGAGTAGCAGGGAAAAAGACTCACCCACAGCTCTTACACAAATGTAAAGACTAATGTGTGGAGAAGATAGCA------TGTTTTCAAATGTTTTCATCTCTTTGTCAGTCTCTGCCAAATAGACCCTCAGGGACTCTCGCTGTCTCTTGGATGAACACTCTCCTGAAGGCTTG------GAGACACCCACAGTATGAGTTAGCCACCCACTGCAGATTTAATAAATGTACAAA-TAAATGAGACTGAATGAAAAAGAAAACACCTCAATCTGACCGTTCTTTGATGCTTTTCTCCCAGATGTGCACTGACCCACTACTTCCGA-AAACTTAGACTATAAATTCTTGCATTTATATATGCTTAGAAGGTCTGTGAGTCAGACTTCGTCTGGTTAATTTTAAGAGTCTCTTGGGGATAAAAGAGATTAAAAAAATTACATGTTCTTCCGGTGACTAGTATTGTATCATTTATTATTACTGGACTTCATTCTCCTGCTACTAGTCTCTTCTCTGTGACCA-TTTTTATTACACAATTT---------TTATTTAACTTGCTTAGTACTAAGGGTGTGCTATGGTGCAGTACATGACACAAATAAGACATTGTTCCTTCTTGGGGTTTGCAGTGTAAGTAATCAAGTTTAATATTTCGTCATAAGTGTTCTTTTATGCATACATATACAAGTGCACATAAATAAGTACACAAACACAAATAAGTACAAATATATATGTATCTATACCAATAAATTAAATACTTGCCAACACATGCAATACTTACCTGCC-AAAAAGAACA----TTTTTT--AAAAAAGC-ATGTATGACAAAT----ATTTAATAGCAATTTTAAATCACATAAACTA-TTTTTC-------ATTTTTTATACAAAATTCAAACTAATTTTAAAAATTTATGATTTTCCTCTATAGACGGCCTTTGGCACGGCTACCACAT------ATTACCAAGGTGCCTCACCTATTGAACAGTTTTCTCTCATAGTTTAAAACTAGATAACTCCTCACATGGAGAATTTAAAGGCTTTAGCAGATAATTGAAGTGGAGTGGTAAACTAATATACAGGAATTTCATAGAATTTGGATCTAGATTGAATGTACTTCAAGGCTGTTAGAGGAAGAGTATTTGTATAATTGGTTAATAGACCAAGAAAATACATAATTTGGTAGAGCTTTTACATATTATTTGGCTAATACAGGAACT-ATCTGTGGTGTATTTGCCCAGAGGCAAGCTTTATTTTTATGGTA---ATGAGTAGGGTCAAATGGACTTTATTAAAACTAGCCTAAATGTGAGGCAAGCAAAGAGAAGTAGTGGGCCATATGGTTAT i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4061749 1368 + 15889662 GGTGATGCCCTATGTCTATTTGTAGTGTGTGTCAATATTTAAAATTACACTCAGCTTGGAAGAAAAGGACATTGAGTAGCAGGGAAAAAGTCTTACCCACAGCTGTCACACA---GTACAGACCACTGTGTGGAGAAGATAGCA------TGTTTTCAAATGTTTTCATATCTTTGTCAGTCTCCGCCAAATAGACCCTCAGGGGCTCTCACTGCCTCTTGGATGAACACTCTCCTGAAGCCTTG------GAGACATCCACAGTATGAGTTAGCCACCCACTGCAGATTTAATAAATGTACAAA-TAAATGAGATTGAATGAAAAATAAAACACCTCGATCTGACTGTTCTTTTATGCTTTTCTCCCAGATGTGCACTGACCCATTACTTACAA-AAACTTAGACTATAAATTCTTGCATTTATATATGCTTAG-AGGTCTGTGAGTCGGACTTCGTCTGGTTAATTTTAAGAGTCTCTTGGGGGTAAAAGAGAT--AAAAAATCACATGTTCTTCTGGAGACTACTATTGTATCATTTATTATTACTGGACTTCATTCTCCTGCTACTAGTCTCTTCTCTGTGACCA-TTTTTATTACACAATTGTTA------TTATTTAATTTGCTGAGTACTAAGGGTGTGCTATGGTGCAGTATATGACACAAATAAGACATTATTCCTTCTCAGGGTTTGCAGTGTAAGTAATCAAGTTTAATATTTAGTCATTAGTGTTCTTTTATGCATACACATACAAGTGCACACAC-----TACACAAACACAAATAAGTACAAATATATATGTATCTATACCAATAAATTAAATACTTGCCAACACATGCAATACTTATCTGCCTAAAAAGAACA----TTTTTTTAAAAAAAGC-ATGTATGACAAGT----ATTTAATAGCAATTTTAAATCACATAAACTA-TTTTTCTG-----TTTTTTTATACAAAATTCAAACTAATTTAAAAAATTTATGATTTTCCTCTATAGCCGGCCTTTGGCACTACTACCACAT------ATTACCAAGGTGCCTCATCTACTGAACAGTTTCCTCTCATAGTTTAAAACTAGAAAACTCCTCACATGGAGAATTTAAAGGCTTTAGCAGATAATTGAAGTGGAGTGGTAAACTAATATACATGAATTTCATAGAATTTGCATCTAGATTGAATGTCCTTCAGGGCTGTTAGAGGAAGAGTATTTGTATAATTGGTTAATAGACCAAGAAAATACACCATTTGGTAGAGCTTTTACATATTATTTGGCTAATACAGGAACT-ATCTGTGGTGTATTTGCCCAGAGGCAAGCTTTATTTTCATGGTA---ATGAGTAGGGTCAAATGGACTTTATTAAAACTAGTCTAAATGTGAGGCAAGCAAAGAGAAGTAGTGGGCCATATGGTTAT i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=2350393.000000 s hg38.chr3_KI270784v1_alt 129070 403 + 184404 AAGAGCAGATAGAGACAGA---AAGTTGAGTCACCAGACTGGCAATCACAGAGCCAGACACTTGGTTTTATCTGACGATAGTTTCCTGAACTCAGACCCAGTCCTGCCTGAGGCCCGAACTAAGACCCAGTTCTGTGAATGCAGAGACACTGTGCTCGGCTGCCCTAATTCCACCATAAGTTTGTGTCATATGCCCTCAATACTTACGGTAATT---TAAAAAATG--TCTACTGTTCACAGCATAAGAATCCAAAAGAAGGAAAACTGAGGGGTAGAGAAGGAAGGAG-AAAAAATAAAAGGAAGAGGGAGAAAGATGGAGGCAGGGAGGGGGAGACAGTGGCTGTAAGCAGGTAAGATGGGATATTAGAGTATCTGGAGGATCCGTCAAAGGGAATGACAATGTAAGATT s panTro5.chr3 25445 403 - 202621043 AAGAGCAGATAGAGACAGA---AAGTTGAGTCACCAGACTGGCCATCACACAGCCAGACACTTGGTTTTATCTGACGATAGTTTCCTGAACTCAGACCCAGTCCTGCCTGAGGCCCGAACTAAGACCCAGTTCTGTGAATGCAGAGACAGTGTGCTCGGCTACCCTAATTCCACCATAAGTTTGTGTCATATGCCCTCAATAGTTACGGTAATT---TAAAAAATG--TCTACTGTTCACAGCATAAGAATCCAAAAGAAGGAAATCTGAGGGGTAGAGAAGGAAGGAG-AAAAAATAAAAGGAAGAGGGAGAAAGATGGAGGCAGGGAGGGGGAGACAGTGGCTGTAAGCAGGTAAGATGGGATATTAGAGTATCTGGAGGATCCGTCAAAGGGAATGACAATGTAAGATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 20457 400 - 205426864 AAGAGCAGATAGAGACAGA---AAGTTGAGTCACCAGACTGGCCATCACAGAGCCAGACACTTGGTTTTATCTGACGACAGTTTCCTGAACTCAGACCCAGTCCTGCCTGAGGCCCGAACTAAGACCCAGTTCTGTGAATGCAGAGACACTGTGCTCGGCTGCCCTAATTCCACCGTAAGTTTGTGTCATATGCCCTCAATACTTACGGTAATT---TAAAAAATG--TCTACTGTTCACAGCAT---AATCCAAAAGAAGGAAAACTGAGGGGTAGAGAAGGAAGGAG-AAAAAATAAAAGGAAGAGGGAGAAAGATGGAGGCAGGGAGGGGGAGACAGTGGCTGTAAGCAGGTAAGATGGGATATTAGAGTATCTGGAGGATCCGTCAAAGGGAATGACAATGTAAGATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 38363 403 + 508821 AAGAGCAGATAGAGACAGA---AAGTAGAGTCACCCGACTGGCAATCACAGAGCCAGACACTTGGTTTTATCTGACGATAGTTTCCTGAACTCAGACCCAGTCCTGCCTGAGGCCCGAACTAAGACCCGGTTCTGTGAATGCAGAGACACTGTGCTCGGCTGCCCTAATTCCACCATAAGTTTGTGTCATATGCCCTCAATACTTACGGTAATT---TAAAAAAAG--TCTACTGTTCACAGCATAAGAATCCAAAAGAAGGAAAGCTGAGAGGTACAGAAGAAAGGAG-AAAAAATAAAAGGAAGAGGGAGAAAGATGGAGGCAGGGAGGGGGAGACAGTGGCTGTAAGCAGGTAAGATGGGATATTAGAGTATCTGGAGGATCCGTCAAAGGGAATGACAATGTAAGATT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44690627 403 + 86207423 aaGAGCAGATAGAGACAGA---AAGTTGAGTCACCAGACTGGCAATCACAGAACCAGACACTTGGTTTTATCTGACGATAGTTTCCTGAACTAAGAACCAGGCCTGCCTGAGGCCCGAACTAAGACCCAGTTCTGTGAATGCAGAGACACTGTGCTCGGCTGCCCTAATTCCACCATAAGTTTGTGTCATATGCCCTCAATACTTACAGTAATT---TTAAAAATG--TCTACTGTTCACAGCATAAGAATCCAAAAGAAGGAAAGCTAAGAGGTAGAGAAGGAAGGAG-AAAAAATAAAAGGAAGAGGGGGAAAGACGGAGGCAGGGAGGGGGAGACAGTGGCTGTAAGCAGGTAAGATGGGATATTAGAGTATCTGGAGGATCCGTCAAAGGGAATGACAATGTAAGATT i nomLeu3.chr21 I 308 C 0 s rheMac8.chr6 81695988 408 + 180051392 AAGAGCAGATAGAGACCGAAAGAAGTTGAGTCACCAGACTGGCAATCACAGAGCCATACACTTGGCTTTATCTGACAATAGTTTCCTGAACTAAGACCTAGTCCTGCCTGAGTCCCAACCTAAGACCTGGTCCTGTGACTGCGGAGACACTGTGCTTGCCTGCCCTAATTCCACCATAAGTTTGTGTCATATGCCCTCAATACTTAAGATAATT---TTTGAAATGTCTCTACTGTTGACAGCATAAGAATCCCaaggaaggaaaggtgagaagtagagaaggaaggag-aaaaaataaaaggaagacagggaaagatagaggcagggagggagAGACAGTGGATGTAAGCAGGTAAGATGGGATATTAGAGGATCTGGAGGATCTGTCAAAGGGAAAGAGGATGTAAGATT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17322438 408 - 20287406 AAGAGCAGATAGAGACCGAAAGAAGTTGAGTCACCAGACTGGCAATCACAGAGCCATACACTTGGCTTTATCTGACAATAGTTTCCTGAACTAAGACCTAGTCCTGCCTGAGTCCCAACCTAAGACCTGGTCCTGTGACTGCGGAGACACTGTGCTTGCCTGCCCTAATTCCACCATAAGTTTGTGTCATATGCCCTCAATACTTAAGATAATT---TTTAAAATGTCTCTACTGTTGACAACATAAGAATCCCaaggaaggaaaggtgagaagtagagaaggaaggag-aaaaaataaaaggaagacagggaaagatagaggcagggagggagAGACAGTGGATGTAAGCAGGTAAGATGGGATATTAGAGGATCTGGAGGATCTGTCAAAGGGAAAGAGGATGTAAGATT i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78953600 408 + 91010382 AAGAGCAGATAGAGACAGAAAGAAGTTGAGTCACCAGACTGGCAATCACAGAGCCATACACTTGGCTTTATCTAACAATAGTTTCCTGAACTAAGACCTAGTCCTGCCCGAGTCCCAACCTAAGACCCGGTCCTGTGACTGCGGAGACACTGTGCTTGCCTGCCCTCATTCCACCCTAAGTTTGTGTCATATGCCCTCAATACTTAAGATAATT---TTTAAAATGTCTCTACTGTTGACAGCATAAGAATCCCaaggaaggaaaggtgagaagtagagaaggaaggag-aaaaaataaaaggaagacagggaaagatagaggcagggagggagAGACAGTGGATGTAAGCAGGTAAGATGGGATATTAGAGGATCTGGAGGATCTGTCAAAGGGAAAGAGGATGTAAGATT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3334095 408 + 21726897 AAGAGCAGATAGAGACAGAAAGAAGTTGAGTCACCAGACTGGCAATCACAGAGCCATACACTTGGCTTTATCTGACAATAGTTGCCTGAACTAAGACCTAGTCCTGCCTGAGTCCCGACCTAAGACCTGTTCCTGTGACTGCGGAGACACTGTGCTCGCCTGCCCTAATTCCACCATAAGTTTGTGTCATATGCCCTCAATACTTAAGATAATT---TTTAAAATGTCTCTACTGTTGACAGCATAAGAATCCCaaggaaggaaaggtgagaagtagagaaggaaggag-aaaaaataaaaggaagacagggaaagatagaggcagggagggagAGACAGTGGATGTAAGCAGGTAAGATGGGATATTAGAGTATCTAGAGGATCCGTCAAAGGGAAAGAGGATGTAAGATT i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81051377 399 - 204313951 AGGATCAGTTAGAGACAAAAAGAAATTGAGTCACCAGATGGGCTATCACAGAGCCAGATGCTTTGTTTCATCTGACAATAGTTTTCTGACCTAAGATCCAGTCCTGCCTGAGACCGGAACTAAGAC-----TATGTGACTGCAGAGGCACTGTGCTCTGCTGCCCTAAGTCCACCATAAATTTGTGTCATATGCCCTCAATACTTAAGGCAATT-AAAAAAAAAAGTCGCTACTGTTCACAGTGTAAGAATCCAAaggaaggaaaggtgagaggtaagaaatgaaggag-aaaaaataaaaggaaga-gggggaagagggagacagggagggagagaCAGGGGTTCTAAGTAGGTAAGGTGAGATATTAGAATATCTGGAGGATCCATCAAAGGGAATGAGGATGTA----- i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16057409 396 - 71252344 AGGAGCAGTTAGAGACAATAAGAAGTTGAGTCACCAGATGGGCTATCACAGAACCAGACACTTGGTTTCATCTGACAATGGTTTTCTGAACTAAGACCCAGTCCTGCCTGAGGCCAGAACTAAGACCCAGTCCTGTGACTGCAGAGGCACTGTGCTCTGCTGCCCTAAGTCCGCCATAAATTTGTGTCATATGCCCACAATACTTAAGGCAATT-AAAAAAAAATGTAGCTACTGTTCACAGCATAAGAATCCAAAGGAAGGACTGGTGAGAGGTAGGAAATGAAGGAGAAAAAAATAAAAGGAA----GGTGAAGATGGAAACAGGGAGGGAGAGACAGTGGCTC------GGCAAGAGGAGATATTAGAGTATCTGGAGGATCCATCAAAGGGAATGAGAATGTA----- i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5390877 410 + 12262279 AGCAGCAGTTAGAGACAAAAAGAAATTGAGTCACCAGATGGACTATCACAGAGCCAGACACTTGGCTTCATCTGACAATAGTTTTCTGAACTAAGACCCAGTCCTGCCAGAGGCCAGAACTAAGACCCAGTTCTGTGACTGCAGAGACACTGTGCTCTGCTGCCCTAAGTCCACCATAAGTTTGTGTCATATGCCCTCAATACTTAAGGCAATTAAAAAAAAAATGTCACTACTGTTCACAGCATAAGAATCCAAAGGAAGGAAAGGTGAGAGGTAGGAAATGAAGGAG-AAAAAATAAAAGGAAGA-GGGGGAAGATGGAGACAGGGAGGGAGAGACAGTGGCTCTAAGTAGGGAAGATGAGATATTAGAGTATCTGGAGGATCCATCAGAGGGAATGAGGATGTAAGATT i cebCap1.NW_016107331v1 C 0 I 8 s aotNan1.NW_018506370v1 4063117 407 + 15889662 AGGAGCAGTTAGAGACAAAAAGAAATTGAGTCACCAGATGGGCTATCACAGAGCCAGACGCTTTGTTTCATCTGACAGTAGTTTTCTGACCTAAGACCCAGTCCTGCCTGAGGCCAGAACTAAGACCCAGTCCCATGACTGCAGAGGCACTGTGCTCTGCTGCCCTAAGTCCACCATAAATTTGTGTCATGTGCCCTCAATACTTAAGGCAATT---TAAAAAATGTTGCTACTGTTCACAGCATAAGAATCCAAAGGAAGGAAAGGTGAGAAGTAGGAAATGAAGGAG-AAAAAATAAAAGGAAGA-GGGGCAAGATGGAGACAGGGAGGGAGAGACAGTGGCTGTAAGTAGGTAAGATAAGATATTAGAGTATCTGGAGGATCCATCAAAGGGAATGAGGATGTAAGATT i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=50366.000000 s hg38.chr3_KI270784v1_alt 129473 19 + 184404 AAAACATGGAGATACAGAT s panTro5.chr3 25848 19 - 202621043 AAAACATGGAGATACAGAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 20857 19 - 205426864 AAAACATGGAGATACAGAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 38766 19 + 508821 AAAACATGGAGATACAGAT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691030 19 + 86207423 AAAACATGGAGATACAGAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81696396 19 + 180051392 ATAATATGGAGATACAGAT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17322846 19 - 20287406 ATAATATGGAGATACAGAT i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78954008 19 + 91010382 ATAATATGTAGATACAGAT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3334503 19 + 21726897 ATAACATGGAGATACAGAT i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81051776 4 - 204313951 ---------------AGat i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16057805 4 - 71252344 ---------------AGAT i saiBol1.JH378106 C 0 C 0 s aotNan1.NW_018506370v1 4063524 3 + 15889662 ----------------TAT i aotNan1.NW_018506370v1 C 0 I 5 e cebCap1.NW_016107331v1 5391287 8 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=880771.000000 s hg38.chr3_KI270784v1_alt 129492 157 + 184404 TTATTTTAATTAC---------ACCAGTAATTTTG-AACATACTCGTTATAAAAGTTTGAAATGAATAAAAATAGTCTTCAAGATAttttaaataaactttatttttt-agagcagttttaggttcacagtaaaattgaacac-aaaatccagagagtttccacaaatc s panTro5.chr3 25867 157 - 202621043 TTATTTTAATTAC---------ACCAGAAATTTTG-AACATACTCGTTATAAAACTTTGAAATGAATAAAAATAGTCTTCAAGATAttttaaataaactttatttttt-agagcagttttaggttcaccgtaaaattgaacac-aaaatccagagagtttccgcaaatc i panTro5.chr3 C 0 C 0 s panPan2.chr3 20876 157 - 205426864 TTATTTTAATTAC---------ACCAGTAATTTTG-AACATACTCGTTATAAAACTTTGAAATGAATAAAAATAGTCTTCAAGATAttttaaataaactttatttttt-agagcagttttaggttcacagtaaaattgaacac-aaaatccagagagtttccacaaatc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 38785 157 + 508821 TTATTTTAATTAC---------ACCAGTAATTTTG-AACATACTCGTTATAAAACTTTGAAATGAATAAAAATAGTCTTCAAGATAttttaaataaactttatttttt-agagcagttttaggttcacagtaaaattgaacac-aaaatccagagagtttccacaaatc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691049 157 + 86207423 TTATTTTAATTAC---------ACCAGTAATTTTG-AACATACTCGTTATAAAACTTTGAAATGAATAAAAGTAGTCTTCAAGATAttttaaataaactttatttttt-agagcagttttaggttcacagtaaaattgaacac-aaaatccagagagtttccacaaatc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81696415 158 + 180051392 TTATTTTAATTAA---------ATAAGTAATTTTG-AACATACTCATTATAAAATTTTGAAATTAATAAAAATAGTCTTCAAGGTAtttttaaaaaactttattttttaagagaagctttaggttcacagtaaaattgaacac-aaagtcagaaaagtttcaacaaatc i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17322865 157 - 20287406 TTATTTTAATTAA---------ATAAGTAATTTTG-AACATACTCATTATAAAATTTTGAAATTAAT-AAAATAGTCTTCAAGGTAtttttaaaaaactttattttttaagagaagctttaggttcacagtaaaattgaacac-aaagtcagaaaagtttcaacaaatc i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78954027 156 + 91010382 TTATTTTAATTAC---------GTAAGTAATTTTG-AACATACTCATTATAAAATTTTGAAATTAATAAAAATAGTCTTCAAGGTAtttttaaaaaactttattttttaagagaagctttaggttcacagtaaaattga--ac-aaagtctgaagagtttcaacaaatc i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3334522 159 + 21726897 TTATTTTAATTAC---------ATAAGTAATTTTGAAACATACTCATTATAAAATTTTGAAATTAATAAAAATAGTCTTTAAGATAttttaaataaactttattttttaagagaagctttaggttcacagtaaaattgaacac-aaagtacaaagagtttcaacaaatc i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81051780 160 - 204313951 ttattttaattattttaattaCACAAGTAATTGTG-AACATACTCAT--TAACATTTTGAAATTAATAAAAATAGTCTTCAAGATATGttcaataaactttatttttt-agagcagttttagattaacagta-----ggacacaaaaatccagagagtttccacaaatc i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16057809 154 - 71252344 TTATTTTAATTAT---------GCAAGTAATTTTG-ACCATACTTGT--TAACATTTTGAAATTAATGAAAATAGTCTTCAGGATAttttcaataaactttatctttt-agagcagttttaggttcacagtaaaattgaacacaaaaatcc--agagtttccacaaatc i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5391295 156 + 12262279 TTATTTTAATTAC---------ACAAGTAATTTTG-AACATACTCAT--TAACATTTTGAAATTAATAAAAATAGTCTTCAAGATATTTCCaataaactttatatttt-agagcagctttaggttcacagtaaaattgaacatgaaaatccagagggtttccacaaatc i cebCap1.NW_016107331v1 I 8 C 0 s aotNan1.NW_018506370v1 4063532 156 + 15889662 TTATTTTAACTAC---------ACAAGTAATTTTG-AACATACTGTT--TAACATTTTGAAGTTAATAAAAATAGTCTTCAAGATAttttcaataaactttatttttt-agagcagttttaggttcacagtaaaattgaacacaaaaatccagagagtttccacaaatc i aotNan1.NW_018506370v1 I 5 I 4990 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=25806.000000 s hg38.chr3_KI270784v1_alt 129649 4 + 184404 ccca s panTro5.chr3 26024 4 - 202621043 ccca i panTro5.chr3 C 0 C 0 s panPan2.chr3 21033 4 - 205426864 ccca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 38942 4 + 508821 ccca i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691206 4 + 86207423 ccca i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81696573 4 + 180051392 ccca i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17323022 4 - 20287406 ccca i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78954183 4 + 91010382 ccca i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3334681 4 + 21726897 ccca i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81051940 4 - 204313951 ccca i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16057963 4 - 71252344 ccca i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5391451 4 + 12262279 ccca i cebCap1.NW_016107331v1 C 0 I 5000 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=103915.000000 s hg38.chr3_KI270784v1_alt 129653 26 + 184404 tccacgtccatgcatctcccctccca s panTro5.chr3 26028 26 - 202621043 tccacatccatgcatctcccctccca i panTro5.chr3 C 0 C 0 s panPan2.chr3 21037 26 - 205426864 tccacatccatgcatctcccctccca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 38946 26 + 508821 tccacatccatgcatctcccctccca i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691210 26 + 86207423 tccacatccatgcatctcccctccca i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81696577 26 + 180051392 tccacatacatgcatatcctctccca i rheMac8.chr6 C 0 I 645 s macNem1.NW_012016021v1 17323026 26 - 20287406 tccacatagatgcatatcctctccca i macNem1.NW_012016021v1 C 0 I 641 s chlSab2.chr4 78954187 26 + 91010382 tccacatacatgcatatcctctccca i chlSab2.chr4 C 0 I 638 s colAng1.NW_012115488v1 3334685 26 + 21726897 tccacatacatgcatatcctctccca i colAng1.NW_012115488v1 C 0 I 628 s calJac3.chr2 81051944 26 - 204313951 gccgtacacatgcataacctcttcca i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16057967 26 - 71252344 gccatatacatgcatatcctcttcca i saiBol1.JH378106 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=14188.000000 s hg38.chr3_KI270784v1_alt 129679 12 + 184404 cggtccacatcg s panTro5.chr3 26054 12 - 202621043 cggtccacatcG i panTro5.chr3 C 0 C 0 s panPan2.chr3 21063 12 - 205426864 ctgtccacatcg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 38972 12 + 508821 cggtccacatcG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691236 12 + 86207423 cggtccacatcG i nomLeu3.chr21 C 0 T 30 s calJac3.chr2 81051970 12 - 204313951 ttgccaacatcc i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16057993 12 - 71252344 ttgccagcatcc i saiBol1.JH378106 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=398.000000 s hg38.chr3_KI270784v1_alt 129691 1 + 184404 c s panTro5.chr3 26066 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 21075 1 - 205426864 c i panPan2.chr3 C 0 I 62 s gorGor5.CYUI01015884v1 38984 1 + 508821 T i gorGor5.CYUI01015884v1 C 0 C 0 s calJac3.chr2 81051982 1 - 204313951 t i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16058005 1 - 71252344 t i saiBol1.JH378106 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44691248 30 + 86207423 T a score=8604.000000 s hg38.chr3_KI270784v1_alt 129692 10 + 184404 gtagcagaat s panTro5.chr3 26067 10 - 202621043 GTAGCAGAAT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 38985 10 + 508821 GTAGCAGAAT i gorGor5.CYUI01015884v1 C 0 C 0 s calJac3.chr2 81051983 10 - 204313951 gtagcagaat i calJac3.chr2 C 0 I 1 s saiBol1.JH378106 16058006 10 - 71252344 gtagcataat i saiBol1.JH378106 C 0 I 1 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44691248 30 + 86207423 T e panPan2.chr3 21076 62 - 205426864 I a score=7950.000000 s hg38.chr3_KI270784v1_alt 129702 9 + 184404 CTAAATTTG s panTro5.chr3 26077 9 - 202621043 CTAAGTTAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 21138 9 - 205426864 CTAAATTTG i panPan2.chr3 I 62 C 0 s gorGor5.CYUI01015884v1 38995 9 + 508821 CTAAATTTG i gorGor5.CYUI01015884v1 C 0 C 0 s calJac3.chr2 81051994 9 - 204313951 gtaaatttg i calJac3.chr2 I 1 I 4906 s saiBol1.JH378106 16058017 9 - 71252344 gtaaatttg i saiBol1.JH378106 I 1 I 4936 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44691248 30 + 86207423 T a score=49000.000000 s hg38.chr3_KI270784v1_alt 129711 67 + 184404 CACGCGTCTCCCCTCCGACTGTCCACATCCTGTAGCAGAATCTAAATTTGCATGCGTCTCCCCTCCG s panTro5.chr3 26086 67 - 202621043 CATGTGTCTCCGCTCCCACTGTCCACAACCTGTAGCAGAATCTAAATTTGCATGCGTCTCCCCTCCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 21147 67 - 205426864 CATGCGTCTCCCCTCCCACTGTCCACATCCTGCAGCGGAATCTAAATTTGCACGCGTCTCCCCTCCC i panPan2.chr3 C 0 T 100 s gorGor5.CYUI01015884v1 39004 67 + 508821 CATGCGTCTCCTCTCCCACGGTCCACATCGTGTAGCAGAATCTAAGTTACCATGTGTCTCTGCTCCC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691218 67 + 86207423 catgcatctcccctcccacggtccacatcGTGTAGCAGAATCTAAATTACCATGTGTCTCCGCTCCC i nomLeu3.chr21 T 30 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=26379.000000 s hg38.chr3_KI270784v1_alt 129778 33 + 184404 ACTGTCCACAACCTGTAGCAGAATCTAAATTTG s panTro5.chr3 26153 33 - 202621043 ACTGTCCACATCGCGTAGCAGAATCTAAATTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 21114 33 - 205426864 ACTGTCCACATCGCGTAGCAGAATCTAAATTTG i panPan2.chr3 T 100 C 0 s gorGor5.CYUI01015884v1 39071 33 + 508821 ACTGTCCACAACCTGTAGCGGAATCCAAATTTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691285 33 + 86207423 ACTGTCCACGACCTGTAGCAGAATCTAAATTTG i nomLeu3.chr21 C 0 T 100 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=11592.000000 s hg38.chr3_KI270784v1_alt 129811 13 + 184404 CATGCGTCTCCCC s panTro5.chr3 26186 13 - 202621043 CATGCGTTTCCCC i panTro5.chr3 C 0 I 50 s panPan2.chr3 21147 13 - 205426864 CATGCGTCTCCCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39104 13 + 508821 CATGCGTCTCCCC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691218 13 + 86207423 catgcatctcccc i nomLeu3.chr21 T 100 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=37137.000000 s hg38.chr3_KI270784v1_alt 129824 47 + 184404 TCCCACTGTCCACATCCTGCAGCGGAATCTAAATTTGCACGCGTCTC s panTro5.chr3 26249 47 - 202621043 TCCCACTGTCCACATCGCGTAGCAGAATCTAAATTTGCATGCGTCTC i panTro5.chr3 I 50 C 0 s panPan2.chr3 21160 47 - 205426864 TCCCACTGTCCACATCCTGCAGCGGAATCTAAATTTGCACGCGTCTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39117 47 + 508821 TCCCACTGTCCACATCCTGTAGCAGAATCTAAATTTGCACGCGTTTC i gorGor5.CYUI01015884v1 C 0 I 50 s nomLeu3.chr21 44691231 47 + 86207423 tcccacggtccacatcGTGTAGCAGAATCTAAATTACCATGTGTCTC i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=39964.000000 s hg38.chr3_KI270784v1_alt 129871 49 + 184404 CTCTCCCACGGTCCACATCCTGCAGCGGAATCTAAATTTGCACGCGTCT s panTro5.chr3 26296 49 - 202621043 CCCTCCCACTGTCCACATCCTGCAGCGGAATCTAAATTTGCATGCGTTT i panTro5.chr3 C 0 T 49 s panPan2.chr3 21207 49 - 205426864 CCCTCCCACTGTCCACATCCTGTAGCGGAATCTAAATTTGCATGCCTCT i panPan2.chr3 C 0 T 201 s gorGor5.CYUI01015884v1 39214 49 + 508821 CCCTCCCACTGTCCACATCCTGTAGCAGAATCTAAATTTGCATGCGTCT i gorGor5.CYUI01015884v1 I 50 I 51 s nomLeu3.chr21 44691278 49 + 86207423 CGCTCCCACTGTCCACGACCTGTAGCAGAATCTAAATTTGCATGCGTCT i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=39280.000000 s hg38.chr3_KI270784v1_alt 129920 49 + 184404 CCCTCCCACTGTCCACATCCTGCAGCGGAATCTAAATTTGCACGCGTCT s panTro5.chr3 26296 49 - 202621043 CCCTCCCACTGTCCACATCCTGCAGCGGAATCTAAATTTGCATGCGTTT i panTro5.chr3 T 49 T 146 s panPan2.chr3 21055 49 - 205426864 ccctcccactgtccacatcgcgtagcagaatCTAAATTTGCATGCGTCT i panPan2.chr3 T 201 C 0 s gorGor5.CYUI01015884v1 39314 49 + 508821 CCCTCCCACTGTCCACTTCCTCCAGCGGAATCTAAATTTGCATGCATCT i gorGor5.CYUI01015884v1 I 51 I 1 s nomLeu3.chr21 44691327 49 + 86207423 CCCTCCCACTTTCCACATCCTGTAGCAGAATCTAAATTTGCATGTGTCT i nomLeu3.chr21 C 0 I 1 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=1800.000000 s hg38.chr3_KI270784v1_alt 129969 3 + 184404 CCC s panPan2.chr3 21104 3 - 205426864 CCC i panPan2.chr3 C 0 I 3 s gorGor5.CYUI01015884v1 39364 3 + 508821 CCC i gorGor5.CYUI01015884v1 I 1 C 0 s nomLeu3.chr21 44691377 3 + 86207423 CCC i nomLeu3.chr21 I 1 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panTro5.chr3 26345 146 - 202621043 T a score=77099.000000 s hg38.chr3_KI270784v1_alt 129972 97 + 184404 TCCCACTGTCCACATCCTGTAGCAGAATCTAAATTTGCACGCGTCTCTCCTCCCACTGTCCACATCGCGTAGCAGAATCTAAATTTGCATGCGTCTT s panTro5.chr3 26199 97 - 202621043 TCCCACTGTCCACATCCTGTAGCAGAAACTAAATTTGCATGCGTTTCCCCTCCCACTGTCCACATCGCGTAGCAGAATCTAAATTTGCATGCGTCTC i panTro5.chr3 T 146 C 0 s panPan2.chr3 21110 97 - 205426864 CCCCACTGTCCACATCGCGTAGCAGAATCTAAATTTGCATGCGTCTCCCCTCCCACTGTCCACATCCTGCAGCGGAATCTAAATTTGCACGCGTCTC i panPan2.chr3 I 3 C 0 s gorGor5.CYUI01015884v1 39367 97 + 508821 TCCCACTGTCCACATCCTGCAGTGGAATCCAAATTTGCACGCGTCTCCCCTCCCACTGTCCACATCCTGCAGCGGAATCTAAATTTGCACGCGTCTT i gorGor5.CYUI01015884v1 C 0 T 300 s nomLeu3.chr21 44691380 97 + 86207423 TCCCACTGTCCACAACCTGTAGCAGAATCTAAATTTGCATGCGTTTCCTCTCCCACCGTCCACATCAAGTAGCAGAATCTAAATTTGCATGCCTCTC i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=72134.000000 s hg38.chr3_KI270784v1_alt 130069 90 + 184404 CTCTCCCACTGTCCACATCCTGTAGCAGAATCTAAATTTGCACGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCAGAATCTAAATTTG s panTro5.chr3 26296 90 - 202621043 CCCTCCCACTGTCCACATCCTGCAGCGGAATCTAAATTTGCATGCGTTTCCTCTCCCACTGTCCACATCCTGCAGCGGAATCTAAATTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 21207 90 - 205426864 CCCTCCCACTGTCCACATCCTGTAGCGGAATCTAAATTTGCATGCCTCTCCTCTCCCACTGTCCACATCCTGCAGGGGAATCTAAATTTG i panPan2.chr3 C 0 T 188 s gorGor5.CYUI01015884v1 39164 90 + 508821 CTCTCCCACTGTCCACATCGCGTAGCAGAATCTAAATTTGCACGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCAGAATCTAAATTTG i gorGor5.CYUI01015884v1 T 300 C 0 s nomLeu3.chr21 44691477 89 + 86207423 -CCCCCCACTTTCCACATCCTGTAGCAGAATCTAAATTTGCATGTGTCTCCCCTCCCACTGTCCACATCGTGTAGCAGAATCTAAATTAC i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=6198.000000 s hg38.chr3_KI270784v1_alt 130159 12 + 184404 CATGCGTCTCCC s panTro5.chr3 26386 12 - 202621043 CATGCGTCTCCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39254 12 + 508821 CATGCGTCTCCT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691566 12 + 86207423 CATGTGTCTCCC i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 21297 188 - 205426864 T a score=7230.000000 s hg38.chr3_KI270784v1_alt 130171 9 + 184404 CTCCCACTG s panTro5.chr3 26398 9 - 202621043 CTCCCACTG i panTro5.chr3 C 0 T 150 s panPan2.chr3 21109 9 - 205426864 TCCCCACTG i panPan2.chr3 T 188 C 0 s gorGor5.CYUI01015884v1 39266 9 + 508821 CTCCCACTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691578 9 + 86207423 CTCCCACCG i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=40896.000000 s hg38.chr3_KI270784v1_alt 130180 49 + 184404 TCCACATCGCGTAGCAGAATCTAAATTTGCATGCGTCTCCCCTCCCACT s panTro5.chr3 26257 49 - 202621043 TCCACATCGCGTAGCAGAATCTAAATTTGCATGCGTCTCCCCTCCCACT i panTro5.chr3 T 150 I 101 s panPan2.chr3 21118 49 - 205426864 TCCACATCGCGTAGCAGAATCTAAATTTGCATGCGTCTCCCCTCCCACT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39275 49 + 508821 TCCACATCGCGTAGAGGAATCCAACTTTGCACGCCTCTCCCCTCCCACT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691587 49 + 86207423 TCCACATCAAGTAGCAGAATCTAAATTTGCATGCGTCTCCTCTCCCACT i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=8464.000000 s hg38.chr3_KI270784v1_alt 130229 30 + 184404 GTCCACATC-CTGCAGCGGAATC------------------------------------------------------------------------------------------------TAAATTTG s panTro5.chr3 26407 126 - 202621043 GTCCATATCTCTGCAG-GGAATCTTAAATTGTGCATGGGTTTCTGCTCCCACTGTCCCACATCCTGCACGAACTTAATATTGCACCTCTCACCTCGCCACGTCCACATCTGGCGGGAATTAAATTTG i panTro5.chr3 I 101 C 0 s panPan2.chr3 21167 30 - 205426864 GTCCACATC-CTGCAGCGGAATC------------------------------------------------------------------------------------------------TAAATTTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39324 30 + 508821 GTCCACTTC-CTCCAGCGGAATC------------------------------------------------------------------------------------------------TAAATTTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691636 30 + 86207423 GTCCACAAC-CTGCAGCGGAATC------------------------------------------------------------------------------------------------TAAATTTG i nomLeu3.chr21 C 0 T 50 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=32039.000000 s hg38.chr3_KI270784v1_alt 130259 50 + 184404 CACGCGTCTCCTCTCCCACGGTCCACATC-CTGCAGCGGAATCTAAATTTG s panTro5.chr3 26533 48 - 202621043 CATG-GTCTCCCC-CCCACTGTCC-CATCATTGCAGCGGAATTATAATTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 21197 50 - 205426864 CACGCGTCTCCCCTCCCACTGTCCACATC-CTGTAGCGGAATCTAAATTTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39354 50 + 508821 CATGCATCTCCCCTCCCACTGTCCACATC-CTGCAGTGGAATCCAAATTTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691616 50 + 86207423 CATGCGTCTCCTCTCCCACTGTCCACAAC-CTGCAGCGGAATCTAAATTTG i nomLeu3.chr21 T 50 T 50 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=5560.000000 s hg38.chr3_KI270784v1_alt 130309 12 + 184404 CACGCGTCTC--CC-- s panTro5.chr3 26581 12 - 202621043 CACGCGTCTC--CC-- i panTro5.chr3 C 0 C 0 s panPan2.chr3 21247 14 - 205426864 CATGCCTCTCCTCT-- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39404 12 + 508821 CACGCGTCTC--CC-- i gorGor5.CYUI01015884v1 C 0 I 52 s nomLeu3.chr21 44691616 14 + 86207423 CATGCGTCTC--CTCT i nomLeu3.chr21 T 50 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=22085.000000 s hg38.chr3_KI270784v1_alt 130321 36 + 184404 TCCAC-TGTCCACATCCTGCAGCAGAATCTAAATTTG s panTro5.chr3 26593 36 - 202621043 TCCACATGTCCACATCATGCAGCGGAATCTAAATT-G i panTro5.chr3 C 0 C 0 s panPan2.chr3 21261 36 - 205426864 CCCAC-TGTCCACATCCTGCAGGGGAATCTAAATTTG i panPan2.chr3 C 0 T 188 s gorGor5.CYUI01015884v1 39468 32 + 508821 CCCAC-TG----CAACCTGTAGCGGAATCTAAATTTG i gorGor5.CYUI01015884v1 I 52 C 0 s nomLeu3.chr21 44691630 36 + 86207423 CCCAC-TGTCCACAACCTGCAGCGGAATCTAAATTTG i nomLeu3.chr21 C 0 T 12955 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=3942.000000 s hg38.chr3_KI270784v1_alt 130357 11 + 184404 CAC-GCGTCTCC s panTro5.chr3 26629 12 - 202621043 CATAGCGTCTCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39500 11 + 508821 CAT-GCGTTTTC i gorGor5.CYUI01015884v1 C 0 I 1 s nomLeu3.chr21 44678711 11 + 86207423 CAT-GCGTCTCC i nomLeu3.chr21 T 12955 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 21297 188 - 205426864 T a score=6168.000000 s hg38.chr3_KI270784v1_alt 130368 11 + 184404 CTCCCACTGTC s panTro5.chr3 26641 11 - 202621043 CTCCCACTGTC i panTro5.chr3 C 0 I 255 s panPan2.chr3 21109 11 - 205426864 TCCCCACTGTC i panPan2.chr3 T 188 C 0 s gorGor5.CYUI01015884v1 39512 9 + 508821 CTCCCACTG-- i gorGor5.CYUI01015884v1 I 1 C 0 s nomLeu3.chr21 44678722 11 + 86207423 CTCCCACTTTC i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=15324.000000 s hg38.chr3_KI270784v1_alt 130379 27 + 184404 CACATCCTGTAGCAGAATCTAAAT-TTG s panTro5.chr3 26907 26 - 202621043 CACATCCTG-AGC-GGATCTAAATCTTG i panTro5.chr3 I 255 C 0 s panPan2.chr3 21120 27 - 205426864 CACATCGCGTAGCAGAATCTAAAT-TTG i panPan2.chr3 C 0 T 102 s gorGor5.CYUI01015884v1 39521 25 + 508821 --CATCCTGTAGTGGAATCCAAAT-TTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678733 27 + 86207423 CACATCCTGTAGCAGAATCTAAAT-TTG i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=8767.000000 s hg38.chr3_KI270784v1_alt 130406 12 + 184404 CATGCGTCTTCT s panTro5.chr3 26933 12 - 202621043 CATGCGTCTCCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 21045 12 - 205426864 catgcatctccc i panPan2.chr3 T 102 C 0 s gorGor5.CYUI01015884v1 39546 12 + 508821 CATGCGTCTCCC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678760 12 + 86207423 CGTGCGTTTCCT i nomLeu3.chr21 C 0 I 12657 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=34790.000000 s hg38.chr3_KI270784v1_alt 130418 50 + 184404 CTCCCACTGCCCACATCCTGTAGCAGAATCTAAATTTGCAAGCGTCTACC s panTro5.chr3 26945 48 - 202621043 CTCCCACTGTCCAGATCCTGTAGCGGAATCTAAATTTGCACGCGTCT--C i panTro5.chr3 C 0 C 0 s panPan2.chr3 21057 50 - 205426864 ctcccactgtccacatcgcgtagcagaatCTAAATTTGCATGCGTCTCCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39558 48 + 508821 CTCCCACTGTCCACATCATGCAGCGGAATCTAAATTTGCATGCATCT--C i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691429 50 + 86207423 CTCCCACCGTCCACATCAAGTAGCAGAATCTAAATTTGCATGCCTCTCCC i nomLeu3.chr21 I 12657 T 249 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=-414.000000 s hg38.chr3_KI270784v1_alt 130468 1 + 184404 A s panTro5.chr3 26993 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 21107 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39606 1 + 508821 C i gorGor5.CYUI01015884v1 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44691479 249 + 86207423 T a score=22294.000000 s hg38.chr3_KI270784v1_alt 130469 38 + 184404 CT-CCCACTGTCCACATCCTGTA-GCAGAATCTAAATTTG s panTro5.chr3 26994 40 - 202621043 CTCCCCCCTGTCCACATCATGCAGGCGGAAATTAAATTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 21108 39 - 205426864 CTCCCCACTGTCCACATCGCGTA-GCAGAATCTAAATTTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39607 39 + 508821 CCTCCCACTGTCCACATCCTGCA-GGGGAATCTAAATTTG i gorGor5.CYUI01015884v1 C 0 T 592 s nomLeu3.chr21 44691230 38 + 86207423 -ctcccacggtccacatcGTGTA-GCAGAATCTAAATTAC i nomLeu3.chr21 T 249 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=29376.000000 s hg38.chr3_KI270784v1_alt 130507 53 + 184404 CACGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCAGAATCTAAATTTGC-------------------------------------------------------------------------------------------------AT s panTro5.chr3 27034 150 - 202621043 CATGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCGTAATCTAAATTTGCAGCGTCTCCTCCCACGTCCACATCAGCAGGGGAATCTAATTTGCGACGCGTCTCCCTCCGACTGTCCATCATGAGGCGGAAATTCTAATTGGGTTCAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 21147 53 - 205426864 CATGCGTCTCCCCTCCCACTGTCCACATCCTGCAGCGGAATCTAAATTTGC-------------------------------------------------------------------------------------------------AC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39054 53 + 508821 CATGTGTCTCTGCTCCCACTGTCCACAACCTGTAGCGGAATCCAAATTTGC-------------------------------------------------------------------------------------------------AT i gorGor5.CYUI01015884v1 T 592 T 100 s nomLeu3.chr21 44691268 53 + 86207423 CATGTGTCTCCGCTCCCACTGTCCACGACCTGTAGCAGAATCTAAATTTGC-------------------------------------------------------------------------------------------------AT i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=58689.000000 s hg38.chr3_KI270784v1_alt 130560 97 + 184404 GCGT-CTTCTCTCCCACT----GCCCACATCCTGTAGCAGAATCTAAATTTGCATGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCA-GAATCTAAATT-TG s panTro5.chr3 27184 102 - 202621043 GCGTTCCTTTCCCCCACTCTCTGTCCAC-TCCTGTGCGCGAATCTAAATTTGCATGCGTCTCCTCTCC-ACTGTCTACATCCTGTAGCGCGAATCTAAATTCTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 21200 97 - 205426864 GCGT-CTCCCCTCCCACT----GTCCACATCCTGTAGCGGAATCTAAATTTGCATGCCTCTCCTCTCCCACTGTCCACATCCTGCAGGG-GAATCTAAATT-TG i panPan2.chr3 C 0 T 50 s gorGor5.CYUI01015884v1 39007 97 + 508821 GCGT-CTCCTCTCCCACG----GTCCACATCGTGTAGCAGAATCTAAGTTACCATGTGTCTCTGCTCCCACTGTCCACAACCTGTAGCG-GAATCCAAATT-TG i gorGor5.CYUI01015884v1 T 100 C 0 s nomLeu3.chr21 44691321 96 + 86207423 GCGT-CTCC-CTCCCACT----TTCCACATCCTGTAGCAGAATCTAAATTTGCATGTGTCTGCCCTCCCACTGTCCACAACCTGTAGCA-GAATCTAAATT-TG i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=30885.000000 s hg38.chr3_KI270784v1_alt 130657 50 + 184404 CATGCGT-CTTCTCTCCCACTGCCCACATCCTGTA-GCAGAATCTAAATTTG s panTro5.chr3 27286 51 - 202621043 CACGCGTTCCTCGCCGCCACTGTCCACATCATGCAAGCGGAATCTAAATT-G i panTro5.chr3 C 0 C 0 s panPan2.chr3 21247 50 - 205426864 CATGCCT-CTCCTCTCCCACTGTCCACATCCTGCA-GGGGAATCTAAATTTG i panPan2.chr3 T 50 T 50 s gorGor5.CYUI01015884v1 39104 50 + 508821 CATGCGT-CTCCCCTCCCACTGTCCACATCCTGTA-GCAGAATCTAAATTTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691417 50 + 86207423 CATGCGT-TTCCTCTCCCACCGTCCACATCAAGTA-GCAGAATCTAAATTTG i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=34221.000000 s hg38.chr3_KI270784v1_alt 130707 50 + 184404 CACGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCAGAATCTAAATTTG s panTro5.chr3 27337 50 - 202621043 CTGCCGTCTCCCCTCCCACTGTCCACATCCTGTAGCGGAATCTAGAATTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 21247 50 - 205426864 CATGCCTCTCCTCTCCCACTGTCCACATCCTGCAGGGGAATCTAAATTTG i panPan2.chr3 T 50 T 50 s gorGor5.CYUI01015884v1 39154 50 + 508821 CACGCGTTTCCTCTCCCACTGTCCACATCGCGTAGCAGAATCTAAATTTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691467 49 + 86207423 CATGCCTCTCCCC-CCCACTTTCCACATCCTGTAGCAGAATCTAAATTTG i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=15380.000000 s hg38.chr3_KI270784v1_alt 130757 22 + 184404 CACGTGACTCCCCTCCCACTGT s panTro5.chr3 27387 21 - 202621043 CACGCGTCTCCCCTCC-ACTGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 21247 22 - 205426864 CATGCCTCTCCTCTCCCACTGT i panPan2.chr3 T 50 C 0 s gorGor5.CYUI01015884v1 39204 22 + 508821 CACGCGTCTCCCCTCCCACTGT i gorGor5.CYUI01015884v1 C 0 T 122 s nomLeu3.chr21 44691516 22 + 86207423 CATGTGTCTCCCCTCCCACTGT i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=600.000000 s hg38.chr3_KI270784v1_alt 130779 1 + 184404 C s panTro5.chr3 27408 1 - 202621043 C i panTro5.chr3 C 0 T 756 s panPan2.chr3 21269 1 - 205426864 C i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 44691538 1 + 86207423 C i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e gorGor5.CYUI01015884v1 39226 122 + 508821 T a score=7459.000000 s hg38.chr3_KI270784v1_alt 130780 28 + 184404 CACATCGCGTAGCAGAATCTAAATTTGT s panTro5.chr3 26653 24 - 202621043 CACATCGCGTAGCAGA---TAAATTTG- i panTro5.chr3 T 756 C 0 s panPan2.chr3 21270 28 - 205426864 CACATCCTGCAGGGGAATCTAAATTTGT i panPan2.chr3 C 0 T 151 s nomLeu3.chr21 44691539 27 + 86207423 CACATCGTGTAGCAGAATCTAAATTAC- i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e gorGor5.CYUI01015884v1 39226 122 + 508821 T a score=39735.000000 s hg38.chr3_KI270784v1_alt 130808 60 + 184404 CATGCGTCTCCCCTCCCACTGTCCACA--TCCTGTA-GCAG-AATC-TA-AATTTGCATG-CGTCTT s panTro5.chr3 26677 67 - 202621043 CATGCGTTTCCCCTCCCACTGTCCACAGCTCGCGTAAGCAGCAATCCTAGAATTTGCATGGCGTCTT i panTro5.chr3 C 0 I 751 s panPan2.chr3 21147 60 - 205426864 CATGCGTCTCCCCTCCCACTGTCCACA--TCCTGCA-GCGG-AATC-TA-AATTTGCACG-CGTCTC i panPan2.chr3 T 151 C 0 s gorGor5.CYUI01015884v1 39104 60 + 508821 CATGCGTCTCCCCTCCCACTGTCCACA--TCCTGTA-GCAG-AATC-TA-AATTTGCACG-CGTTTC i gorGor5.CYUI01015884v1 T 122 C 0 s nomLeu3.chr21 44691566 60 + 86207423 CATGTGTCTCCCCTCCCACCGTCCACA--TCAAGTA-GCAG-AATC-TA-AATTTGCATG-CGTCTC i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=4537.000000 s hg38.chr3_KI270784v1_alt 130868 12 + 184404 CTCTCCCACTG-C s panTro5.chr3 27495 11 - 202621043 C-CTCC-ACTGTC i panTro5.chr3 I 751 C 0 s panPan2.chr3 21207 12 - 205426864 CCCTCCCACTG-T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39164 12 + 508821 CTCTCCCACTG-T i gorGor5.CYUI01015884v1 C 0 I 50 s nomLeu3.chr21 44691626 12 + 86207423 CTCTCCCACTG-T i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=7784.000000 s hg38.chr3_KI270784v1_alt 130880 9 + 184404 CCACATCCT s panTro5.chr3 27506 9 - 202621043 CCACATCCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 21219 9 - 205426864 CCACATCCT i panPan2.chr3 C 0 T 152 s gorGor5.CYUI01015884v1 39226 9 + 508821 CCACATCCT i gorGor5.CYUI01015884v1 I 50 C 0 s nomLeu3.chr21 44691638 9 + 86207423 CCACAACCT i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=16619.000000 s hg38.chr3_KI270784v1_alt 130889 19 + 184404 GTAGCAGAATCTAAATTTG s panTro5.chr3 27515 19 - 202621043 GTAGCGGAATCTAAATTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 21076 19 - 205426864 gtagcagaatCTAAATTTG i panPan2.chr3 T 152 C 0 s gorGor5.CYUI01015884v1 39235 19 + 508821 GTAGCAGAATCTAAATTTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691647 19 + 86207423 GCAGCGGAATCTAAATTTG i nomLeu3.chr21 C 0 T 12906 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=11748.000000 s hg38.chr3_KI270784v1_alt 130908 30 + 184404 CATGCG----------------------------------------------------TCTCC-CT---CCCACTGTCCACATCGC s panTro5.chr3 27534 81 - 202621043 -ATCCGGTTCCGCCTCCACCTGTCCCACATCGATCAGCAATGCACATTTGCTACGCGTTCTCC-CT---CCCACTGTCCACATCAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 21095 33 - 205426864 CATGCG----------------------------------------------------TCTCC-CTCTCCCCACTGTCCACATCGC i panPan2.chr3 C 0 I 18 s gorGor5.CYUI01015884v1 39254 31 + 508821 CATGCG----------------------------------------------------TCTCCTCT---CCCACTGTCCACATCGC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678760 31 + 86207423 CGTGCG----------------------------------------------------TTTCCTCT---CCCACCGTCCACATCAA i nomLeu3.chr21 T 12906 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=28361.000000 s hg38.chr3_KI270784v1_alt 130938 64 + 184404 GTAGGAGAATCTAAATT-GCATGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCAGAATCTAAA s panTro5.chr3 27615 65 - 202621043 GCAGCGGAATCTAAATTTGCACGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCGGAATCTAAA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39285 65 + 508821 GTAGAGGAATCCAACTTTGCACGCCTCTCCCCTCCCACTGTCCACTTCCTCCAGCGGAATCTAAA i gorGor5.CYUI01015884v1 C 0 I 243 s nomLeu3.chr21 44678791 65 + 86207423 GTAGCAGAATCTAAATTTGCATGTGTCTCCCCTCCCACTGTCCACAACCTGTAGCAGAATCTAAA i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 21128 18 - 205426864 I a score=1092.000000 s hg38.chr3_KI270784v1_alt 131002 2 + 184404 TT s panTro5.chr3 27680 2 - 202621043 TT i panTro5.chr3 C 0 I 1 s gorGor5.CYUI01015884v1 39593 2 + 508821 TT i gorGor5.CYUI01015884v1 I 243 C 0 s nomLeu3.chr21 44678856 2 + 86207423 TT i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 21128 18 - 205426864 I a score=41666.000000 s hg38.chr3_KI270784v1_alt 131004 51 + 184404 -GCACGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCAGAATCTAAATTTG s panTro5.chr3 27683 51 - 202621043 -GCATGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCGGAATCTAAATTTG i panTro5.chr3 I 1 C 0 s panPan2.chr3 21146 51 - 205426864 -GCATGCGTCTCCCCTCCCACTGTCCACATCCTGCAGCGGAATCTAAATTTG i panPan2.chr3 I 18 C 0 s gorGor5.CYUI01015884v1 39595 51 + 508821 -GCATGCATCTCCCCTCCCACTGTCCACATCCTGCAGGGGAATCTAAATTTG i gorGor5.CYUI01015884v1 C 0 T 677 s nomLeu3.chr21 44678858 52 + 86207423 ACCATGTGTCTCCCCTCCCACCGTCCACATCAAGTAGCAGAATCTAAATTTG i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=24295.000000 s hg38.chr3_KI270784v1_alt 131055 50 + 184404 CATGCGTCTTCTCTCCCACTGCCCACATCCTGTAGCAGAATCTAAATTTG s panTro5.chr3 27734 50 - 202621043 CATGCCTCTCCTCTCCCACTGTCCACATCCTGCAGGGGAATCTAAATTTG i panTro5.chr3 C 0 T 1411 s panPan2.chr3 21197 50 - 205426864 CACGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCGGAATCTAAATTTG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 44678910 50 + 86207423 CATGCGTCTCCTCTCCCACTGTCCACAACCTGCAGCGGAATCTAAATTTG i nomLeu3.chr21 C 0 T 233 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e gorGor5.CYUI01015884v1 39646 677 + 508821 T a score=850.000000 s hg38.chr3_KI270784v1_alt 131105 11 + 184404 CATGCATCTCC s panPan2.chr3 21247 11 - 205426864 CATGCCTCTCC i panPan2.chr3 C 0 T 145 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44678960 233 + 86207423 T e gorGor5.CYUI01015884v1 39646 677 + 508821 T e panTro5.chr3 27784 1411 - 202621043 T a score=0.000000 s hg38.chr3_KI270784v1_alt 131116 2 + 184404 CT e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44678960 233 + 86207423 T e panPan2.chr3 21258 145 - 205426864 T e gorGor5.CYUI01015884v1 39646 677 + 508821 T e panTro5.chr3 27784 1411 - 202621043 T a score=100.000000 s hg38.chr3_KI270784v1_alt 131118 1 + 184404 C s gorGor5.CYUI01015884v1 38969 1 + 508821 c i gorGor5.CYUI01015884v1 T 677 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44678960 233 + 86207423 T e panPan2.chr3 21258 145 - 205426864 T e panTro5.chr3 27784 1411 - 202621043 T a score=300.000000 s hg38.chr3_KI270784v1_alt 131119 1 + 184404 C s panPan2.chr3 21113 1 - 205426864 C i panPan2.chr3 T 145 C 0 s gorGor5.CYUI01015884v1 38970 1 + 508821 c i gorGor5.CYUI01015884v1 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44678960 233 + 86207423 T e panTro5.chr3 27784 1411 - 202621043 T a score=15550.000000 s hg38.chr3_KI270784v1_alt 131120 33 + 184404 ACTGTCCACGTCGCATAGCAGAATCTAAATTTG s panPan2.chr3 21114 33 - 205426864 ACTGTCCACATCGCGTAGCAGAATCTAAATTTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 38971 33 + 508821 acggtccacatcGTGTAGCAGAATCTAAATTTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678727 33 + 86207423 ACTTTCCACATCCTGTAGCAGAATCTAAATTTG i nomLeu3.chr21 T 233 T 149 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panTro5.chr3 27784 1411 - 202621043 T a score=1326.000000 s hg38.chr3_KI270784v1_alt 131153 3 + 184404 CAC s panPan2.chr3 21147 3 - 205426864 CAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39004 3 + 508821 CAT i gorGor5.CYUI01015884v1 C 0 I 100 s nomLeu3.chr21 44678611 3 + 86207423 cat i nomLeu3.chr21 T 149 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panTro5.chr3 27784 1411 - 202621043 T a score=17283.000000 s hg38.chr3_KI270784v1_alt 131156 34 + 184404 GCGTCTCCCCTCCCACTGTCCACATCCTGTAGCA s panPan2.chr3 21150 34 - 205426864 GCGTCTCCCCTCCCACTGTCCACATCCTGCAGCG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39107 34 + 508821 GCGTCTCCCCTCCCACTGTCCACATCCTGTAGCA i gorGor5.CYUI01015884v1 I 100 C 0 s nomLeu3.chr21 44678614 34 + 86207423 gcatctcccctcccacggtccacatcGTGTAGCA i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panTro5.chr3 27784 1411 - 202621043 T a score=67912.000000 s hg38.chr3_KI270784v1_alt 131190 113 + 184404 GAATCTAAATTTGCACGCGTCTCCCCTCCCACTG-TCCACATC-CTGTAGCAGAATCT-AAATT-TGCATGCGTCTTCTCTCCCACTG-CCCACATCCTG-------------------------------------------TAGCAGAATCTAAATTTG s panTro5.chr3 26373 160 - 202621043 GAATCTAAATTTGCATGCGTCTCCCCTCCCACTGGTCCATATCTCTGCAG-GGAATCTTAAATTGTGCATGGGTTTCTGCTCCCACTGTCCCACATCCTGCACGAACTTAATATTGCACCTCTCACCTCGCCACGTCCACATCTGGCGGGAATTAAATTTG i panTro5.chr3 T 1411 C 0 s panPan2.chr3 21184 113 - 205426864 GAATCTAAATTTGCACGCGTCTCCCCTCCCACTG-TCCACATC-CTGTAGCGGAATCT-AAATT-TGCATGCCTCTCCTCTCCCACTG-TCCACATCCTG-------------------------------------------CAGGGGAATCTAAATTTG i panPan2.chr3 C 0 T 150 s gorGor5.CYUI01015884v1 39141 113 + 508821 GAATCTAAATTTGCACGCGTTTCCTCTCCCACTG-TCCACATC-GCGTAGCAGAATCT-AAATT-TGCACGCGTCTCCCCTCCCACTG-TCCACATCCTG-------------------------------------------TAGCAGAATCTAAATTTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678648 112 + 86207423 GAATCTAAATTACCATGTGTCTCCGCTCCCACTG-TCCACGAC-CTGTAGCAGAATCT-AAATT-TGCATGCGTCTCC-CTCCCACTT-TCCACATCCTG-------------------------------------------TAGCAGAATCTAAATTTG i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=66349.000000 s hg38.chr3_KI270784v1_alt 131303 109 + 184404 CACGCGTCTCCCCTCCCACTGTCCACATC-CTGTAGCAGAATCTAAATTTGCACGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCAGAATCTAAATTTGCAC-GCGTCT s panTro5.chr3 26533 106 - 202621043 CATG-GTCTCCCC-CCCACTGTCC-CATCATTGCAGCGGAATTATAATTTGCACGCGTCTCCCTCCACA-TGTCCACATCATGCAGCGGAATCTAAATT-GCATAGCGTCT i panTro5.chr3 C 0 I 105 s panPan2.chr3 21147 109 - 205426864 CATGCGTCTCCCCTCCCACTGTCCACATC-CTGCAGCGGAATCTAAATTTGCACGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCGGAATCTAAATTTGCAT-GCCTCT i panPan2.chr3 T 150 C 0 s gorGor5.CYUI01015884v1 39254 109 + 508821 CATGCGTCTCCTCTCCCACTGTCCACATC-GCGTAGAGGAATCCAACTTTGCACGCCTCTCCCCTCCCACTGTCCACTTCCTCCAGCGGAATCTAAATTTGCAT-GCATCT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678760 109 + 86207423 CGTGCGTTTCCTCTCCCACCGTCCACATC-AAGTAGCAGAATCTAAATTTGCATGTGTCTCCCCTCCCACTGTCCACAACCTGTAGCAGAATCTAAATTACCAT-GTGTCT i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=25168.000000 s hg38.chr3_KI270784v1_alt 131412 41 + 184404 CCCCTCCCACTGTCCACATC-CTGTAGCAGAATCTA-AATTTG s panTro5.chr3 26744 41 - 202621043 CCCCTCACCCTGTCCACATCTCTGCAC--GAATCTAGAATTTG i panTro5.chr3 I 105 C 0 s panPan2.chr3 21256 41 - 205426864 CCTCTCCCACTGTCCACATC-CTGCAGGGGAATCTA-AATTTG i panPan2.chr3 C 0 T 50 s gorGor5.CYUI01015884v1 39363 41 + 508821 CCCCTCCCACTGTCCACATC-CTGCAGTGGAATCCA-AATTTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678869 41 + 86207423 CCCCTCCCACCGTCCACATC-AAGTAGCAGAATCTA-AATTTG i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=22550.000000 s hg38.chr3_KI270784v1_alt 131453 30 + 184404 CACGCGTCTCCCCTCCCACTGTCCACATCC s panTro5.chr3 26785 29 - 202621043 CATGCGTTTCCTCTCC-ACTGTCCACATCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 21247 30 - 205426864 CATGCCTCTCCTCTCCCACTGTCCACATCC i panPan2.chr3 T 50 T 151 s gorGor5.CYUI01015884v1 39404 30 + 508821 CACGCGTCTCCCCTCCCACTGTCCACATCC i gorGor5.CYUI01015884v1 C 0 T 401 s nomLeu3.chr21 44678910 30 + 86207423 CATGCGTCTCCTCTCCCACTGTCCACAACC i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=11220.000000 s hg38.chr3_KI270784v1_alt 131483 21 + 184404 GCGTAGCA-GAATCTAAATTTG s panTro5.chr3 26814 21 - 202621043 GC-CAGCAAGAATCTAAATTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 21126 21 - 205426864 GCGTAGCA-GAATCTAAATTTG i panPan2.chr3 T 151 C 0 s gorGor5.CYUI01015884v1 39033 21 + 508821 GTGTAGCA-GAATCTAAGTTAC i gorGor5.CYUI01015884v1 T 401 C 0 s nomLeu3.chr21 44678940 20 + 86207423 -TGCAGCG-GAATCTAAATTTG i nomLeu3.chr21 C 0 I 12470 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=4081.000000 s hg38.chr3_KI270784v1_alt 131504 13 + 184404 CACGCGTCTCCCC s panTro5.chr3 26835 12 - 202621043 CACGCGTC-CCCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 21147 13 - 205426864 CATGCGTCTCCCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39054 13 + 508821 CATGTGTCTCTGC i gorGor5.CYUI01015884v1 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44678960 12470 + 86207423 I a score=31671.000000 s hg38.chr3_KI270784v1_alt 131517 50 + 184404 TCCCACT---GTCCACATCCTGTAG-CACAATCTAAATTTGCATGCGTCTTCTC s panTro5.chr3 26847 50 - 202621043 TCCCACTTTTGTCCACATCATGCAGTCGGAATCTAAATTTGCATGC----TCCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 21160 50 - 205426864 TCCCACT---GTCCACATCCTGCAG-CGGAATCTAAATTTGCACGCGTCTCCCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39067 50 + 508821 TCCCACT---GTCCACAACCTGTAG-CGGAATCCAAATTTGCATGCGTCTCCCC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691430 50 + 86207423 TCCCACC---GTCCACATCAAGTAG-CAGAATCTAAATTTGCATGCCTCTCCCC i nomLeu3.chr21 I 12470 T 232 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=1587.000000 s hg38.chr3_KI270784v1_alt 131567 4 + 184404 TCCC s panTro5.chr3 26897 4 - 202621043 CTCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 21210 4 - 205426864 TCCC i panPan2.chr3 C 0 T 100 s gorGor5.CYUI01015884v1 39117 4 + 508821 TCCC i gorGor5.CYUI01015884v1 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44691480 232 + 86207423 T a score=6435.000000 s hg38.chr3_KI270784v1_alt 131571 13 + 184404 ACTGCCCACATCC s panTro5.chr3 26901 13 - 202621043 ACTGTCCACATCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 21114 13 - 205426864 ACTGTCCACATCG i panPan2.chr3 T 100 C 0 s gorGor5.CYUI01015884v1 39121 13 + 508821 ACTGTCCACATCC i gorGor5.CYUI01015884v1 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44691480 232 + 86207423 T a score=12452.000000 s hg38.chr3_KI270784v1_alt 131584 23 + 184404 TGTAGCAGAATCTAAAT-TTGCAT s panTro5.chr3 26914 22 - 202621043 TG-AGCGGA-TCTAAATCTTGCAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 21127 23 - 205426864 CGTAGCAGAATCTAAAT-TTGCAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39134 23 + 508821 TGTAGCAGAATCTAAAT-TTGCAC i gorGor5.CYUI01015884v1 C 0 I 50 s nomLeu3.chr21 44691248 23 + 86207423 TGTAGCAGAATCTAAAT-TACCAT i nomLeu3.chr21 T 232 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=49224.000000 s hg38.chr3_KI270784v1_alt 131607 59 + 184404 GCGTCTCCCCTCCCACTGTCCACATCCTGTAGCAGAATCTAAATTTGCACGCGTCTCCC s panTro5.chr3 26936 59 - 202621043 GCGTCTCCTCTCCCACTGTCCAGATCCTGTAGCGGAATCTAAATTTGCACGCGTCTCAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 21150 59 - 205426864 GCGTCTCCCCTCCCACTGTCCACATCCTGCAGCGGAATCTAAATTTGCACGCGTCTCCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39207 59 + 508821 GCGTCTCCCCTCCCACTGTCCACATCCTGTAGCAGAATCTAAATTTGCATGCGTCTCCT i gorGor5.CYUI01015884v1 I 50 C 0 s nomLeu3.chr21 44691271 59 + 86207423 GTGTCTCCGCTCCCACTGTCCACGACCTGTAGCAGAATCTAAATTTGCATGCGTCTCCC i nomLeu3.chr21 C 0 T 12458 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=17951.000000 s hg38.chr3_KI270784v1_alt 131666 28 + 184404 CTCCCACTGTCCACATCCTGTAG-CAGAA s panTro5.chr3 26995 29 - 202621043 TCCCCCCTGTCCACATCATGCAGGCGGAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 21209 28 - 205426864 CTCCCACTGTCCACATCCTGTAG-CGGAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39266 28 + 508821 CTCCCACTGTCCACATCGCGTAG-AGGAA i gorGor5.CYUI01015884v1 C 0 T 119 s nomLeu3.chr21 44678872 28 + 86207423 CTCCCACCGTCCACATCAAGTAG-CAGAA i nomLeu3.chr21 T 12458 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=13447.000000 s hg38.chr3_KI270784v1_alt 131694 33 + 184404 ATTCTAAATTTGCACGCGTCTCCCCTCCCACTG s panTro5.chr3 27024 31 - 202621043 ATT--AAATTTGCATGCGTCTCCCCTCCCACTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 21237 31 - 205426864 TCT--AAATTTGCATGCCTCTCCTCTCCCACTG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 44678900 31 + 86207423 TCT--AAATTTGCATGCGTCTCCTCTCCCACTG i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e gorGor5.CYUI01015884v1 39294 119 + 508821 T a score=21952.000000 s hg38.chr3_KI270784v1_alt 131727 29 + 184404 TCCACATCCTGTAGCAGAATCTAAATTTG s panTro5.chr3 27055 29 - 202621043 TCCACATCCTGTAGCGTAATCTAAATTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 21268 29 - 205426864 TCCACATCCTGCAGGGGAATCTAAATTTG i panPan2.chr3 C 0 T 100 s gorGor5.CYUI01015884v1 39175 29 + 508821 TCCACATCGCGTAGCAGAATCTAAATTTG i gorGor5.CYUI01015884v1 T 119 C 0 s nomLeu3.chr21 44678931 29 + 86207423 TCCACAACCTGCAGCGGAATCTAAATTTG i nomLeu3.chr21 C 0 T 50 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=8217.000000 s hg38.chr3_KI270784v1_alt 131756 11 + 184404 CACGCGTCTCC s panTro5.chr3 27084 10 - 202621043 CA-GCGTCTCC i panTro5.chr3 C 0 I 41 s panPan2.chr3 21197 11 - 205426864 CACGCGTCTCC i panPan2.chr3 T 100 C 0 s gorGor5.CYUI01015884v1 39204 11 + 508821 CACGCGTCTCC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678910 11 + 86207423 CATGCGTCTCC i nomLeu3.chr21 T 50 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=15835.000000 s hg38.chr3_KI270784v1_alt 131767 32 + 184404 CCTCCCACTGTCCACATCCTGTAGCACAATCT s panPan2.chr3 21208 32 - 205426864 CCTCCCACTGTCCACATCCTGTAGCGGAATCT i panPan2.chr3 C 0 T 126 s gorGor5.CYUI01015884v1 39215 32 + 508821 CCTCCCACTGTCCACATCCTGTAGCAGAATCT i gorGor5.CYUI01015884v1 C 0 T 237 s nomLeu3.chr21 44678921 32 + 86207423 TCTCCCACTGTCCACAACCTGCAGCGGAATCT i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panTro5.chr3 27094 41 - 202621043 I a score=332.000000 s hg38.chr3_KI270784v1_alt 131799 6 + 184404 AAAATT s nomLeu3.chr21 44678953 6 + 86207423 AAATTT i nomLeu3.chr21 C 0 T 348 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 21240 126 - 205426864 T e gorGor5.CYUI01015884v1 39247 237 + 508821 T e panTro5.chr3 27094 41 - 202621043 I a score=0.000000 s hg38.chr3_KI270784v1_alt 131805 2 + 184404 TG e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44678959 348 + 86207423 T e panPan2.chr3 21240 126 - 205426864 T e gorGor5.CYUI01015884v1 39247 237 + 508821 T e panTro5.chr3 27094 41 - 202621043 I a score=451.000000 s hg38.chr3_KI270784v1_alt 131807 6 + 184404 CATGCG s nomLeu3.chr21 44678611 6 + 86207423 catgca i nomLeu3.chr21 T 348 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 21240 126 - 205426864 T e gorGor5.CYUI01015884v1 39247 237 + 508821 T e panTro5.chr3 27094 41 - 202621043 I a score=-711.000000 s hg38.chr3_KI270784v1_alt 131813 11 + 184404 TCTTC-----------------------------------------------------TCTCCC s panTro5.chr3 27135 64 - 202621043 TCTCCCTCCGACTGTCCATCATGAGGCGGAAATTCTAATTGGGTTCAATGCGTTCCTTTCCCCC i panTro5.chr3 I 41 C 0 s gorGor5.CYUI01015884v1 39010 11 + 508821 TCTCC-----------------------------------------------------TCTCCC i gorGor5.CYUI01015884v1 T 237 C 0 s nomLeu3.chr21 44678617 11 + 86207423 tctcc-----------------------------------------------------cctccc i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 21240 126 - 205426864 T a score=58588.000000 s hg38.chr3_KI270784v1_alt 131824 90 + 184404 ACT----GCCCACATCCTGTAGCAGAATCTAAATTTGCATGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCA-GAATCTAAATT-TGCACGCGT s panTro5.chr3 27199 94 - 202621043 ACTCTCTGTCCAC-TCCTGTGCGCGAATCTAAATTTGCATGCGTCTCCTCTCC-ACTGTCTACATCCTGTAGCGCGAATCTAAATTCTGCACGCGT i panTro5.chr3 C 0 T 1100 s panPan2.chr3 21114 90 - 205426864 ACT----GTCCACATCGCGTAGCAGAATCTAAATTTGCATGCGTCTCCCCTCCCACTGTCCACATCCTGCAGCG-GAATCTAAATT-TGCACGCGT i panPan2.chr3 T 126 C 0 s gorGor5.CYUI01015884v1 39021 90 + 508821 ACG----GTCCACATCGTGTAGCAGAATCTAAGTTACCATGTGTCTCTGCTCCCACTGTCCACAACCTGTAGCG-GAATCCAAATT-TGCATGCGT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678628 90 + 86207423 acg----gtccacatcGTGTAGCAGAATCTAAATTACCATGTGTCTCCGCTCCCACTGTCCACGACCTGTAGCA-GAATCTAAATT-TGCATGCGT i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=44750.000000 s hg38.chr3_KI270784v1_alt 131914 56 + 184404 CTTCTCTCCCACTGCCCACATCCTGTAGCAGAATCTAAATTTGCATGCGTCTCCCC s panTro5.chr3 26193 56 - 202621043 TTCCCCTCCCACTGTCCACATCCTGTAGCAGAAACTAAATTTGCATGCGTTTCCCC i panTro5.chr3 T 1100 I 845 s panPan2.chr3 21204 56 - 205426864 CTCCCCTCCCACTGTCCACATCCTGTAGCGGAATCTAAATTTGCATGCCTCTCCTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39111 56 + 508821 CTCCCCTCCCACTGTCCACATCCTGTAGCAGAATCTAAATTTGCACGCGTTTCCTC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678718 55 + 86207423 -CTCCCTCCCACTTTCCACATCCTGTAGCAGAATCTAAATTTGCGTGCGTTTCCTC i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=12920.000000 s hg38.chr3_KI270784v1_alt 131970 16 + 184404 TCCCACTGTCCACATC s panTro5.chr3 27094 15 - 202621043 TCCCAC-GTCCACATC i panTro5.chr3 I 845 I 1 s panPan2.chr3 21260 16 - 205426864 TCCCACTGTCCACATC i panPan2.chr3 C 0 T 98 s gorGor5.CYUI01015884v1 39167 16 + 508821 TCCCACTGTCCACATC i gorGor5.CYUI01015884v1 C 0 I 2 s nomLeu3.chr21 44678773 16 + 86207423 TCCCACCGTCCACATC i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=29830.000000 s hg38.chr3_KI270784v1_alt 131986 46 + 184404 --GCATAGCAGAATCTAAATTTGC-ACGCGTCTCCCCTCCCACTGTCCA s panTro5.chr3 27110 43 - 202621043 --GCA--GGGGAATCTAA-TTTGCGACGCGTCTCCC-TCCGACTGTCCA i panTro5.chr3 I 1 I 59 s panPan2.chr3 21178 44 - 205426864 --GCA--GCGGAATCTAAATTTGC-ACGCGTCTCCCCTCCCACTGTCCA i panPan2.chr3 T 98 C 0 s gorGor5.CYUI01015884v1 39185 44 + 508821 --GTA--GCAGAATCTAAATTTGC-ACGCGTCTCCCCTCCCACTGTCCA i gorGor5.CYUI01015884v1 I 2 C 0 s nomLeu3.chr21 44678789 46 + 86207423 AAGTA--GCAGAATCTAAATTTGC-ATGTGTCTCCCCTCCCACTGTCCA i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=1146.000000 s hg38.chr3_KI270784v1_alt 132032 2 + 184404 CA s panPan2.chr3 21222 2 - 205426864 CA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39229 2 + 508821 CA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678835 2 + 86207423 CA i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panTro5.chr3 27153 59 - 202621043 I a score=18373.000000 s hg38.chr3_KI270784v1_alt 132034 26 + 184404 TCCTGTAGCAGAATCTAAATTTGCAT s panTro5.chr3 27212 26 - 202621043 TCCTGTGCGCGAATCTAAATTTGCAT i panTro5.chr3 I 59 C 0 s panPan2.chr3 21224 26 - 205426864 TCCTGTAGCGGAATCTAAATTTGCAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39231 26 + 508821 TCCTGTAGCAGAATCTAAATTTGCAT i gorGor5.CYUI01015884v1 C 0 I 73 s nomLeu3.chr21 44678837 26 + 86207423 ACCTGTAGCAGAATCTAAATTACCAT i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=4557.000000 s hg38.chr3_KI270784v1_alt 132060 11 + 184404 GCGTCTTCTCT s panTro5.chr3 27238 11 - 202621043 GCGTCTCCTCT i panTro5.chr3 C 0 I 152 s panPan2.chr3 21250 11 - 205426864 GCCTCTCCTCT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 44678863 11 + 86207423 GTGTCTCCCCT i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e gorGor5.CYUI01015884v1 39257 73 + 508821 I a score=4062.000000 s hg38.chr3_KI270784v1_alt 132071 11 + 184404 CCCACTGCCCA s panTro5.chr3 27401 10 - 202621043 CC-ACTGTCCA i panTro5.chr3 I 152 I 20 s panPan2.chr3 21261 11 - 205426864 CCCACTGTCCA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 44678874 11 + 86207423 CCCACCGTCCA i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e gorGor5.CYUI01015884v1 39257 73 + 508821 I a score=573.000000 s hg38.chr3_KI270784v1_alt 132082 2 + 184404 CA s panPan2.chr3 21272 2 - 205426864 CA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 44678885 2 + 86207423 CA i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e gorGor5.CYUI01015884v1 39257 73 + 508821 I e panTro5.chr3 27411 20 - 202621043 I a score=546.000000 s hg38.chr3_KI270784v1_alt 132084 1 + 184404 T s panPan2.chr3 21274 1 - 205426864 T i panPan2.chr3 C 0 T 100 s gorGor5.CYUI01015884v1 39330 1 + 508821 T i gorGor5.CYUI01015884v1 I 73 C 0 s nomLeu3.chr21 44678887 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panTro5.chr3 27411 20 - 202621043 I a score=-123.000000 s hg38.chr3_KI270784v1_alt 132085 1 + 184404 A s gorGor5.CYUI01015884v1 39331 1 + 508821 T i gorGor5.CYUI01015884v1 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44678888 0 + 86207423 C e panPan2.chr3 21275 100 - 205426864 T e panTro5.chr3 27411 20 - 202621043 I a score=8381.000000 s hg38.chr3_KI270784v1_alt 132086 20 + 184404 CCTGTAGCAGAATCTAAATT s panPan2.chr3 21175 20 - 205426864 CCTGCAGCGGAATCTAAATT i panPan2.chr3 T 100 C 0 s gorGor5.CYUI01015884v1 39332 20 + 508821 CCTCCAGCGGAATCTAAATT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678888 20 + 86207423 CAAGTAGCAGAATCTAAATT i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panTro5.chr3 27411 20 - 202621043 I a score=15633.000000 s hg38.chr3_KI270784v1_alt 132106 24 + 184404 TGCAC-GCGTCTCCCC--TCCCAC-TGT s panTro5.chr3 27431 28 - 202621043 TGCACCGCGTCTCTCCCTTCCCACCTGT i panTro5.chr3 I 20 C 0 s panPan2.chr3 21195 24 - 205426864 TGCAC-GCGTCTCCCC--TCCCAC-TGT i panPan2.chr3 C 0 T 50 s gorGor5.CYUI01015884v1 39352 24 + 508821 TGCAT-GCATCTCCCC--TCCCAC-TGT i gorGor5.CYUI01015884v1 C 0 I 99 s nomLeu3.chr21 44678908 24 + 86207423 TGCAT-GCGTCTCCTC--TCCCAC-TGT i nomLeu3.chr21 C 0 T 299 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=0.000000 s hg38.chr3_KI270784v1_alt 132130 1 + 184404 A e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44678932 299 + 86207423 T e panPan2.chr3 21219 50 - 205426864 T e gorGor5.CYUI01015884v1 39376 99 + 508821 I e panTro5.chr3 27459 0 - 202621043 C a score=1746.000000 s hg38.chr3_KI270784v1_alt 132131 3 + 184404 CCA s panTro5.chr3 27459 3 - 202621043 CCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 21169 3 - 205426864 CCA i panPan2.chr3 T 50 C 0 s nomLeu3.chr21 44678633 3 + 86207423 cca i nomLeu3.chr21 T 299 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e gorGor5.CYUI01015884v1 39376 99 + 508821 I a score=26624.000000 s hg38.chr3_KI270784v1_alt 132134 46 + 184404 CATCCTGTAGCAGAATCTAAATTTGCATGCGTCTTCTCTCCCACTG s panTro5.chr3 27462 42 - 202621043 CATA-TGCAGCGGAATCTAAATTTGCAT-CGTCTCC-CTCC-ACTG i panTro5.chr3 C 0 I 1 s panPan2.chr3 21172 46 - 205426864 CATCCTGCAGCGGAATCTAAATTTGCACGCGTCTCCCCTCCCACTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39475 46 + 508821 CAACCTGTAGCGGAATCTAAATTTGCATGCGTTTTCTCTCCCACTG i gorGor5.CYUI01015884v1 I 99 I 46 s nomLeu3.chr21 44678636 46 + 86207423 catcGTGTAGCAGAATCTAAATTACCATGTGTCTCCGCTCCCACTG i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=23264.000000 s hg38.chr3_KI270784v1_alt 132180 29 + 184404 CCCACATCCTGTAGCAGAATCTAAATTTG s panTro5.chr3 27505 29 - 202621043 CCCACATCCTGTAGCGGAATCTAAATTTG i panTro5.chr3 I 1 T 285 s panPan2.chr3 21218 29 - 205426864 TCCACATCCTGTAGCGGAATCTAAATTTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39567 29 + 508821 TCCACATCATGCAGCGGAATCTAAATTTG i gorGor5.CYUI01015884v1 I 46 C 0 s nomLeu3.chr21 44678682 29 + 86207423 TCCACGACCTGTAGCAGAATCTAAATTTG i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=3218.000000 s hg38.chr3_KI270784v1_alt 132209 12 + 184404 CATGCATCTCC-C s panPan2.chr3 21247 13 - 205426864 CATGCCTCTCCTC i panPan2.chr3 C 0 T 148 s gorGor5.CYUI01015884v1 39596 13 + 508821 CATGCATCTCCCC i gorGor5.CYUI01015884v1 C 0 T 642 s nomLeu3.chr21 44678711 12 + 86207423 CATGCGTCTCCC- i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panTro5.chr3 27534 285 - 202621043 T a score=573.000000 s hg38.chr3_KI270784v1_alt 132221 2 + 184404 TC s gorGor5.CYUI01015884v1 38967 2 + 508821 tc i gorGor5.CYUI01015884v1 T 642 C 0 s nomLeu3.chr21 44678723 2 + 86207423 TC i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 21260 148 - 205426864 T e panTro5.chr3 27534 285 - 202621043 T a score=23822.000000 s hg38.chr3_KI270784v1_alt 132223 50 + 184404 CCACTGTCCACGTCGCATAGCAGAATCTAAATTTGCACGCGTCTCCCCTC s panPan2.chr3 21112 50 - 205426864 CCACTGTCCACATCGCGTAGCAGAATCTAAATTTGCATGCGTCTCCCCTC i panPan2.chr3 T 148 C 0 s gorGor5.CYUI01015884v1 38969 50 + 508821 ccacggtccacatcGTGTAGCAGAATCTAAATTTGCATGCGTCTCCTCTC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678725 50 + 86207423 CCACTTTCCACATCCTGTAGCAGAATCTAAATTTGCGTGCGTTTCCTCTC i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panTro5.chr3 27534 285 - 202621043 T a score=2000.000000 s hg38.chr3_KI270784v1_alt 132273 2 + 184404 CC s panTro5.chr3 27249 2 - 202621043 CC i panTro5.chr3 T 285 C 0 s panPan2.chr3 21162 2 - 205426864 CC i panPan2.chr3 C 0 T 50 s gorGor5.CYUI01015884v1 39019 2 + 508821 CC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678775 2 + 86207423 CC i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=51890.000000 s hg38.chr3_KI270784v1_alt 132275 89 + 184404 ACTGTCCACATCCTGTAGCA-GAATCTAAATT-TGCATGCGTCTCCTCTC--CCACTGTCCACATCCTGC-AGCTAAATCTAAATTTGCACGCG s panTro5.chr3 27251 92 - 202621043 ACTGTCTACATCCTGTAGCGCGAATCTAAATTCTGCACGCGT-TCCTCGCCGCCACTGTCCACATCATGCAAGCGGAATCTAAA-TTGCTGCCG i panTro5.chr3 C 0 C 0 s panPan2.chr3 21114 89 - 205426864 ACTGTCCACATCGCGTAGCA-GAATCTAAATT-TGCATGCGTCTCCCCTC--CCACTGTCCACATCCTGC-AGCGGAATCTAAATTTGCACGCG i panPan2.chr3 T 50 C 0 s gorGor5.CYUI01015884v1 39021 89 + 508821 ACGGTCCACATCGTGTAGCA-GAATCTAAGTT-ACCATGTGTCTCTGCTC--CCACTGTCCACAACCTGT-AGCGGAATCCAAATTTGCATGCG i gorGor5.CYUI01015884v1 C 0 T 150 s nomLeu3.chr21 44678777 89 + 86207423 ACCGTCCACATCAAGTAGCA-GAATCTAAATT-TGCATGTGTCTCCCCTC--CCACTGTCCACAACCTGT-AGCAGAATCTAAATTACCATGTG i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=10730.000000 s hg38.chr3_KI270784v1_alt 132364 11 + 184404 TCTCCCCTCCC s panTro5.chr3 27343 11 - 202621043 TCTCCCCTCCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 21203 11 - 205426864 TCTCCCCTCCC i panPan2.chr3 C 0 T 100 s gorGor5.CYUI01015884v1 38960 11 + 508821 tctcccctccc i gorGor5.CYUI01015884v1 T 150 C 0 s nomLeu3.chr21 44678866 11 + 86207423 TCTCCCCTCCC i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=37400.000000 s hg38.chr3_KI270784v1_alt 132375 47 + 184404 ACTGTCCACATCCTGTAGCAGAATCTAAATTTGCACGCGTCTCCCCT s panTro5.chr3 27354 47 - 202621043 ACTGTCCACATCCTGTAGCGGAATCTAGAATTGCACGCGTCTCCCCT i panTro5.chr3 C 0 T 404 s panPan2.chr3 21114 47 - 205426864 ACTGTCCACATCGCGTAGCAGAATCTAAATTTGCATGCGTCTCCCCT i panPan2.chr3 T 100 C 0 s gorGor5.CYUI01015884v1 38971 47 + 508821 acggtccacatcGTGTAGCAGAATCTAAATTTGCATGCGTCTCCTCT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678877 47 + 86207423 ACCGTCCACATCAAGTAGCAGAATCTAAATTTGCATGCGTCTCCTCT i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=3000.000000 s hg38.chr3_KI270784v1_alt 132422 3 + 184404 CCC s panTro5.chr3 26997 3 - 202621043 CCC i panTro5.chr3 T 404 C 0 s panPan2.chr3 21161 3 - 205426864 CCC i panPan2.chr3 C 0 T 50 s gorGor5.CYUI01015884v1 39018 3 + 508821 CCC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678924 3 + 86207423 CCC i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=19508.000000 s hg38.chr3_KI270784v1_alt 132425 33 + 184404 ACGGTCCACATCGCGTAG-CAGAATCTAAATTTG s panTro5.chr3 27000 34 - 202621043 CCTGTCCACATCATGCAGGCGGAAATTAAATTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 21114 33 - 205426864 ACTGTCCACATCGCGTAG-CAGAATCTAAATTTG i panPan2.chr3 T 50 C 0 s gorGor5.CYUI01015884v1 39021 33 + 508821 ACGGTCCACATCGTGTAG-CAGAATCTAAGTTAC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678927 33 + 86207423 ACTGTCCACAACCTGCAG-CGGAATCTAAATTTG i nomLeu3.chr21 C 0 T 100 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=4537.000000 s hg38.chr3_KI270784v1_alt 132458 6 + 184404 CACGCG s panTro5.chr3 27034 6 - 202621043 CATGCG i panTro5.chr3 C 0 C 0 s panPan2.chr3 21147 6 - 205426864 CATGCG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39054 6 + 508821 CATGTG i gorGor5.CYUI01015884v1 C 0 T 100 s nomLeu3.chr21 44678860 6 + 86207423 CATGTG i nomLeu3.chr21 T 100 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=8730.000000 s hg38.chr3_KI270784v1_alt 132464 9 + 184404 TCTCCCCTC s panTro5.chr3 27040 9 - 202621043 TCTCCCCTC i panTro5.chr3 C 0 I 352 s panPan2.chr3 21153 9 - 205426864 TCTCCCCTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 38960 9 + 508821 tctcccctc i gorGor5.CYUI01015884v1 T 100 C 0 s nomLeu3.chr21 44678866 9 + 86207423 TCTCCCCTC i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=8443.000000 s hg38.chr3_KI270784v1_alt 132473 10 + 184404 CCACTGTCCA s panTro5.chr3 27401 10 - 202621043 CCACTGTCCA i panTro5.chr3 I 352 I 12 s panPan2.chr3 21162 10 - 205426864 CCACTGTCCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 38969 10 + 508821 ccacggtcca i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678875 10 + 86207423 CCACCGTCCA i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=4493.000000 s hg38.chr3_KI270784v1_alt 132483 12 + 184404 CATCCTGTAGCA s panPan2.chr3 21172 12 - 205426864 CATCCTGCAGCG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 38979 12 + 508821 catcGTGTAGCA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678885 12 + 86207423 CATCAAGTAGCA i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panTro5.chr3 27411 12 - 202621043 I a score=15616.000000 s hg38.chr3_KI270784v1_alt 132495 26 + 184404 GAATCTAAATTTGCA-CGCG--TCTCCCC s panTro5.chr3 27423 26 - 202621043 GGATCTAA---TGCACCGCGTCTCTCCCT i panTro5.chr3 I 12 C 0 s panPan2.chr3 21184 26 - 205426864 GAATCTAAATTTGCA-CGCG--TCTCCCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 38991 26 + 508821 GAATCTAAATTTGCA-TGCG--TCTCCTC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44678897 26 + 86207423 GAATCTAAATTTGCA-TGCG--TCTCCTC i nomLeu3.chr21 C 0 I 12407 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=37024.000000 s hg38.chr3_KI270784v1_alt 132521 62 + 184404 TCCCA-CTGTCCACATCCTGTAGCAGAATCTAAATTTGCACGCGTCTCCCCTCCCACTGT-CCA s panTro5.chr3 27449 60 - 202621043 TCCCACCTGTCCACAT-ATGCAGCGGAATCTAAATTTGCAT-CGTCTCCC--TCCACTGTCCCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 21210 62 - 205426864 TCCCA-CTGTCCACATCCTGTAGCGGAATCTAAATTTGCATGCCTCTCCTCTCCCACTGT-CCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39017 62 + 508821 TCCCA-CGGTCCACATCGTGTAGCAGAATCTAAGTTACCATGTGTCTCTGCTCCCACTGT-CCA i gorGor5.CYUI01015884v1 C 0 I 396 s nomLeu3.chr21 44691330 62 + 86207423 TCCCA-CTTTCCACATCCTGTAGCAGAATCTAAATTTGCATGTGTCTGCCCTCCCACTGT-CCA i nomLeu3.chr21 I 12407 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=20183.000000 s hg38.chr3_KI270784v1_alt 132583 25 + 184404 CATCCTGTAGCAGAATCTAAATTTG s panTro5.chr3 27509 25 - 202621043 CATCCTGTAGCGGAATCTAAATTTG i panTro5.chr3 C 0 T 328 s panPan2.chr3 21272 25 - 205426864 CATCCTGCAGGGGAATCTAAATTTG i panPan2.chr3 C 0 T 50 s gorGor5.CYUI01015884v1 39475 25 + 508821 CAACCTGTAGCGGAATCTAAATTTG i gorGor5.CYUI01015884v1 I 396 C 0 s nomLeu3.chr21 44691392 25 + 86207423 CAACCTGTAGCAGAATCTAAATTTG i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=5189.000000 s hg38.chr3_KI270784v1_alt 132608 12 + 184404 CATGCGTCTTCT s panPan2.chr3 21247 12 - 205426864 CATGCCTCTCCT i panPan2.chr3 T 50 C 0 s gorGor5.CYUI01015884v1 39500 12 + 508821 CATGCGTTTTCT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691417 12 + 86207423 CATGCGTTTCCT i nomLeu3.chr21 C 0 T 100 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panTro5.chr3 27534 328 - 202621043 T a score=4638.000000 s hg38.chr3_KI270784v1_alt 132620 8 + 184404 CTCCCACT s panPan2.chr3 21259 8 - 205426864 CTCCCACT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39512 8 + 508821 CTCCCACT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691329 8 + 86207423 CTCCCACT i nomLeu3.chr21 T 100 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e panTro5.chr3 27534 328 - 202621043 T a score=-1240.000000 s hg38.chr3_KI270784v1_alt 132628 1 + 184404 -G s panTro5.chr3 27206 1 - 202621043 -G i panTro5.chr3 T 328 C 0 s panPan2.chr3 21267 1 - 205426864 -G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39520 1 + 508821 -G i gorGor5.CYUI01015884v1 C 0 T 396 s nomLeu3.chr21 44691337 1 + 86207423 T- i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=20873.000000 s hg38.chr3_KI270784v1_alt 132629 29 + 184404 TCCACATCCTGTAGCAGAATCTAAATTTG s panTro5.chr3 27207 28 - 202621043 TCCAC-TCCTGTGCGCGAATCTAAATTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 21268 29 - 205426864 TCCACATCCTGCAGGGGAATCTAAATTTG i panPan2.chr3 C 0 T 150 s gorGor5.CYUI01015884v1 39125 29 + 508821 TCCACATCCTGTAGCAGAATCTAAATTTG i gorGor5.CYUI01015884v1 T 396 C 0 s nomLeu3.chr21 44691338 29 + 86207423 TCCACATCCTGTAGCAGAATCTAAATTTG i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=76889.000000 s hg38.chr3_KI270784v1_alt 132658 113 + 184404 CACGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCA-GAATCTAAATT-TGCACGCGTCTCCCCTC-CCACTGTCCACATCCTGTA-GCAGAATCTAAATTTGCATGCGTCTCCCC s panTro5.chr3 27235 115 - 202621043 CATGCGTCTCCTCTCC-ACTGTCTACATCCTGTAGCGCGAATCTAAATTCTGCACGCGTTCCTCGCCGCCACTGTCCACATCATGCAAGCGGAATCTAAATT-GCTGCCGTCTCCCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 21147 113 - 205426864 CATGCGTCTCCCCTCCCACTGTCCACATCCTGCAGCG-GAATCTAAATT-TGCACGCGTCTCCCCTC-CCACTGTCCACATCCTGTA-GCGGAATCTAAATTTGCATGCCTCTCCTC i panPan2.chr3 T 150 C 0 s gorGor5.CYUI01015884v1 39154 113 + 508821 CACGCGTTTCCTCTCCCACTGTCCACATCGCGTAGCA-GAATCTAAATT-TGCACGCGTCTCCCCTC-CCACTGTCCACATCCTGTA-GCAGAATCTAAATTTGCATGCGTCTCCTC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691367 113 + 86207423 CATGTGTCTGCCCTCCCACTGTCCACAACCTGTAGCA-GAATCTAAATT-TGCATGCGTTTCCTCTC-CCACCGTCCACATCAAGTA-GCAGAATCTAAATTTGCATGCCTCTCCCC i nomLeu3.chr21 C 0 T 150 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=3910.000000 s hg38.chr3_KI270784v1_alt 132771 4 + 184404 TCCC s panTro5.chr3 27350 4 - 202621043 TCCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 21260 4 - 205426864 TCCC i panPan2.chr3 C 0 T 150 s gorGor5.CYUI01015884v1 39267 4 + 508821 TCCC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691330 4 + 86207423 TCCC i nomLeu3.chr21 T 150 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=36561.000000 s hg38.chr3_KI270784v1_alt 132775 49 + 184404 ACTGTCCACATCCCGTAGCAGAATCTAAATTTGCATGCGTCTCCCCTCC s panTro5.chr3 27354 49 - 202621043 ACTGTCCACATCCTGTAGCGGAATCTAGAATTGCACGCGTCTCCCCTCC i panTro5.chr3 C 0 T 1251 s panPan2.chr3 21114 49 - 205426864 ACTGTCCACATCGCGTAGCAGAATCTAAATTTGCATGCGTCTCCCCTCC i panPan2.chr3 T 150 C 0 s gorGor5.CYUI01015884v1 39271 49 + 508821 ACTGTCCACATCGCGTAGAGGAATCCAACTTTGCACGCCTCTCCCCTCC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691334 49 + 86207423 ACTTTCCACATCCTGTAGCAGAATCTAAATTTGCATGTGTCTGCCCTCC i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=67659.000000 s hg38.chr3_KI270784v1_alt 132824 85 + 184404 CACTGTCCACATCCTGTAGCAGAATCTAAATTTGCACGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCAGAATCTAAATTTGC s panTro5.chr3 26152 85 - 202621043 CACTGTCCACATCGCGTAGCAGAATCTAAATTTGCATGCGTTTCCCCTCCCACTGTCCACATCCTGTAGCAGAAACTAAATTTGC i panTro5.chr3 T 1251 I 1348 s panPan2.chr3 21163 85 - 205426864 CACTGTCCACATCCTGCAGCGGAATCTAAATTTGCACGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCGGAATCTAAATTTGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39320 85 + 508821 CACTGTCCACTTCCTCCAGCGGAATCTAAATTTGCATGCATCTCCCCTCCCACTGTCCACATCCTGCAGTGGAATCCAAATTTGC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691383 85 + 86207423 CACTGTCCACAACCTGTAGCAGAATCTAAATTTGCATGCGTTTCCTCTCCCACCGTCCACATCAAGTAGCAGAATCTAAATTTGC i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=20991.000000 s hg38.chr3_KI270784v1_alt 132909 30 + 184404 ATGCGTCTCCCCTCCCACTGTCCACATCCT s panTro5.chr3 27585 30 - 202621043 ACGCGTTCTCCCTCCCACTGTCCACATCAT i panTro5.chr3 I 1348 C 0 s panPan2.chr3 21248 30 - 205426864 ATGCCTCTCCTCTCCCACTGTCCACATCCT i panPan2.chr3 C 0 T 150 s gorGor5.CYUI01015884v1 39405 30 + 508821 ACGCGTCTCCCCTCCCACTGTCCACATCCT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44691468 29 + 86207423 ATGCCTCTCCCC-CCCACTTTCCACATCCT i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=34459.000000 s hg38.chr3_KI270784v1_alt 132939 40 + 184404 GTAGCAGAATCTAAATTTGCATGCGTCTCCCCTCCCACTG s panTro5.chr3 27615 40 - 202621043 GCAGCGGAATCTAAATTTGCACGCGTCTCCCCTCCCACTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 21128 40 - 205426864 GTAGCAGAATCTAAATTTGCATGCGTCTCCCCTCCCACTG i panPan2.chr3 T 150 C 0 s gorGor5.CYUI01015884v1 39435 40 + 508821 GCAGCGGAATCTAAATTTGCACGCGTCTTCTCTCCCACTG i gorGor5.CYUI01015884v1 C 0 I 46 s nomLeu3.chr21 44691497 40 + 86207423 GTAGCAGAATCTAAATTTGCATGTGTCTCCCCTCCCACTG i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=2292.000000 s hg38.chr3_KI270784v1_alt 132979 4 + 184404 TCCA s panTro5.chr3 27655 4 - 202621043 TCCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 21168 4 - 205426864 TCCA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 44691537 4 + 86207423 TCCA i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e gorGor5.CYUI01015884v1 39475 46 + 508821 I a score=444301.000000 s hg38.chr3_KI270784v1_alt 132983 517 + 184404 CATCCTGTAGCAGAATCTAAATTTGCATGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCAGAATCTAAATTTGCATGCGTCTCCCCTCCCACTGTCCACATCCTGCAGGGGAATCTAAATTTGTTCCAATCAGTGAAACTACAATGACTAGTCTtgtcttgttggggattttt-catacacactcatgtgaaacattggtatgcagttttcttttactgtaatatcattgtgctgttttaatattagcctcattgaatgagttaggaaatattccctctgattctgtcttctgaaaaagattgt--------------------------------------------------------------------aaggaattgttataatatttttcataaatgtttggtagattctaccagtggacccatctgggactggtactttatatttaggaa-gttattaattattgatagtatttctttaatacataagagttattctaactagtt-tttcttgtgtcagaatctagcaaattTAGATTCTGCTACACGATGTGGACAGTGGGAGGGGAGACACATGCAAA s panTro5.chr3 27659 586 - 202621043 CATCCTGTAGCGGAATCTAAATTTGCATGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCGGAATCTAAATTTGCATGCCTCTCCTCTCCCACTGTCCACATCCTGCAGGGGAATCTAAATTTGTTCCAATCAGTGAAACTACAATGACTAGTCTtgtcttgttggggatttttgcatacacactcatgtgaaacattggtatgcagttttcttttattgtaatatcattgtgctgttttaatattagcctcattgaatgagttaggaaatattccctctgattctgtcttctgaaaaagattgttttaatattagcctcattgaatgagttaggaaatattccctctgattctgtcttctgaaaaagattgtaaggaattgttataatatttttcataaatgtttggtagattctaccagtggacccatctgggactggtactttatatttaggaa-gttattaattattgatagtatttctttaatatataagagttattctaactagtt-tttcttgtgtcagaatctagcaaattTAGATTTTGCTACACGATGTGGACAGTGGGAGGGGAGACACATACAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 21172 518 - 205426864 CATCCTGCAGCGGAATCTAAATTTGCACGCGTCTCCCCTCCCACTGTCCACATCCTGTAGCGGAATCTAAATTTGCATGCCTCTCCTCTCCCACTGTCCACATCCTGCAGGGGAATCTAAATTTGTTCCAATCAGTGAAACTACAATGACTAGTCTTGTCttgttggggatttttgcatacacactcatgtgaaacattggtatgcagttttcttttattgtaatatcattgtgctgttttaatattagcctcattgaatgagttaggaaatattccctctgattctgtcttctgaaaaagattgt--------------------------------------------------------------------aaggaattgttataatatttttcataaatgtttggtagattctaccagtggacccatctgggactggtactttatatttaggaa-gttattaattattgatagtatttctttaatatataagagttattctaactagtt-tttcttgtgtcagaatctagcaaattTAGATTTTGCTACACGATGTGGACAGTGGGAGGGGAGACACATGCAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 39521 518 + 508821 CATCCTGTAGTGGAATCCAAATTTGCATGCGTCTCCCCTCCCACTGTCCACATCATGCAGCGGAATCTAAATTTGCATGCATCTCCCCTCCCACTGTCCACATCCTGCAGGGGAATCTAAATTTGTTCCAATCAGTGAAACTACAATGCCTAGTCTtgtcttgttggggatttttgcatacacactcatgtgagacattggtatgcagttttcttttattgtaatatcattgtgctgttttaatattagcctcattgaatgagttaggaagtattccctctgattctgtcttctgaaaaagattgt--------------------------------------------------------------------aaggaattgttataatatttttcataaatgtttggtagattctaccagtggacccatctgggactggtactttatatttaggaa-gttattaattattgatagtatttctttaatacataagagttattctaactagtt-tttcttgtgtcagaatctagcaaattTAGATTCTGCTACACGATGTGGACAGTGGGAGGGGAGACGCATGCAAA i gorGor5.CYUI01015884v1 I 46 C 0 s nomLeu3.chr21 44691541 517 + 86207423 CATCGTGTAGCAGAATCTAAATTACCATGTGTCTCCCCTCCCACCGTCCACATCAAGTAGCAGAATCTAAATTTGCATGCGTCTCCTCTCCCACTGTCCACAACCTGCAGCGGAATCTAAATTTGTTCCAATCAGTGAAGCTACAATGActagtcttgtc---ttggggatttttgcatacacactcatgtgagacattggtgtgtagttttcttttattgtaatatcattgtgctgttttaatattagcctcattgaatgagataggaagtattccctctgattctgtcttctgaaaaagattgt--------------------------------------------------------------------aaggaattgttataatattttccataaatgtttagtagattctaccagtggacccatctgggactggcactttatatttaggaaggttattaattattgatagtatttctttaatacataagagttattctgactagctatttcttgtgttagAATCCAGCAAATTTAGATTCTGCTACACGATGTGGACAGTGGGAGGGGAGACCCATGCAAA i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e calJac3.chr2 81052003 4906 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16058026 4936 - 71252344 I e colAng1.NW_012115488v1 3334711 628 + 21726897 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78954213 638 + 91010382 I e macNem1.NW_012016021v1 17323052 641 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=7640.000000 s hg38.chr3_KI270784v1_alt 133500 3 + 184404 TAC s panTro5.chr3 28245 3 - 202621043 TAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 21690 3 - 205426864 TAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 40039 3 + 508821 TAC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44692058 3 + 86207423 TAC i nomLeu3.chr21 C 0 C 0 s macNem1.NW_012016021v1 17323693 3 - 20287406 taC i macNem1.NW_012016021v1 I 641 C 0 s chlSab2.chr4 78954851 3 + 91010382 taC i chlSab2.chr4 I 638 C 0 s colAng1.NW_012115488v1 3335339 3 + 21726897 TAC i colAng1.NW_012115488v1 I 628 C 0 s calJac3.chr2 81056909 3 - 204313951 TAT i calJac3.chr2 I 4906 C 0 s saiBol1.JH378106 16062962 3 - 71252344 TAT i saiBol1.JH378106 I 4936 C 0 e aotNan1.NW_018506370v1 4063688 4990 + 15889662 I e cebCap1.NW_016107331v1 5391455 5000 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=6040.000000 s hg38.chr3_KI270784v1_alt 133503 2 + 184404 GT s panTro5.chr3 28248 2 - 202621043 GT i panTro5.chr3 C 0 C 0 s panPan2.chr3 21693 2 - 205426864 GT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 40042 2 + 508821 GT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44692061 2 + 86207423 CT i nomLeu3.chr21 C 0 C 0 s macNem1.NW_012016021v1 17323696 2 - 20287406 GG i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78954854 2 + 91010382 GG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3335342 2 + 21726897 GT i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81056912 2 - 204313951 GT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16062965 2 - 71252344 GT i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5396455 2 + 12262279 GT i cebCap1.NW_016107331v1 I 5000 C 0 s aotNan1.NW_018506370v1 4068678 2 + 15889662 GT i aotNan1.NW_018506370v1 I 4990 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e rheMac8.chr6 81696603 645 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=1238403.000000 s hg38.chr3_KI270784v1_alt 133505 215 + 184404 GTGTTTTCAAACTCAATGGCTGTCATCATTGAGACA--CTGAATTTTCACCATATTGTTTAATTTGCTACTACTT-AAAGTTATTATCTCTTCTGCAAATTCA-TTTTTTAAAAAGATTGACGATCTAGAAAC--AAAGCAGAATTTTACTTTATGTGGAATTAATAAT--CAGT------TTTGGCTAGATTAATTAAATGCAGTATCTGTAAGACTTTCattaaaat s panTro5.chr3 28250 215 - 202621043 GTGTTTTCAAACTCAATGGCTGTCATCATTGAGACA--CTGAATTTTCACCATATTGTTTAATTTGCTACTACTT-AAAGTTATTATCTCTTCTGCAAATTCA-TTTTTTAAAAAGATTGACGATCTAGAAAC--AAAGCAGAATTTTACTTTATGTGGAATTAATAAT--CAGT------TTTGGCTAGATTAATTAAATGCAGTATCTGTAAGACTTTCattaaaat i panTro5.chr3 C 0 C 0 s panPan2.chr3 21695 215 - 205426864 GTGTTTTCAAACTCAATGGCTGTCATCATTGAGACA--CTGAATTTTCACCATATTGTTTAATTTGCTACTACTT-AAAGTTATTATCTCTTCTGCAAATTCA-TTTTTTAAAAAGATTGACGATCTAGAAAC--AAAGCAGAATTTTACTTTATGTGGAATTAATAAT--CAGT------TTTGGCTAGATTAATTAAATGCAGTATCTGTAAGACTTTCattaaaat i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 40044 215 + 508821 GTGTTTTCAGACTCATTGGCTGTCATCATTGAGACA--CTGAATTGTCACCATATTGTTTAATTTGCTACTACTT-AAAGTTATTATCTCTTCTGCAAATTCA-TTTTTTAAAAAGATTGACAATCTAGAAAC--AAAGCAGAATTTTACTTCATGTGGAATTAATAAT--CAGT------TTTGGCTAGATTAATTAAATGCAGTATCTGTAAGACTTTCattaaaat i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44692063 215 + 86207423 GTGTTTTCAAACTCATTGGCTGTCATCATTGAGACA--CTGAATTTTCACCATATTGTTTAATTTGCTACTACTT-AAAGTTAATATCTCTTCTGCAAATTCA-TTTTTTAAAAAGATAGACAATCTAGAAAC--AAAGCAGAATTTTACTTTATGTGGAATTAATAAT--CAGT------TTTGGCTAGATTAATTAAATGCAGTATCTGTAAGACTTTCattaaaat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81697248 219 + 180051392 GTGTTTTTGAACTCATTGGCTGTCATCATTGAGACACTCTGAGTTTTCACTATATTGTTTAAATTGCTGCTACTT-ACAGTTATTATCTATTCTGCAAATTCA-TTTTTTAAAAAGTTCAACAATGTAGACACTGAAAGCAGAATTGTACTTTATGTGGAATTAATAAT--CAGT------TTGGGCTAGATTATTTAAATGCAGTGTCTGTAAGATTTTCATAAAAAT i rheMac8.chr6 I 645 C 0 s macNem1.NW_012016021v1 17323698 219 - 20287406 GTGTTTTTGAACTCATTGGCTGTCATCATTGAGACACTCTGAGTTTTCACTATATTGTTTAAATTGCTGCTACTT-ACAGTTATTATCTATTCTGCAAATTCA-TTTTTTAAAAAGTTTGACAATGTAGACACTGAAAGCAGAATTGTACTTTATGTGGAATTAATAAT--CAGT------TTGGGCTAGATTATTTAAATGCAGTGTCTGTAAGATTTTCATAAAAAT i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78954856 219 + 91010382 GTGTTTTTGAACTCATTGGCTGTCATCATTGAGACACTCTGAGTTTTCACTATATTGTTTAAATTGCTGCTACTT-AAAGTTATTATCTATTCTGCAAATTCA-TTTTTTAAAAAGTTCGACAATGTAGACACTGAAAGCAGAATTGTACTTTATGTGGAATTAATAAT--CAGT------TTGGGCTAGATTATTTAAATGCAGTGTCTGTAAGATTTTCATAAAAAT i chlSab2.chr4 C 0 I 85 s colAng1.NW_012115488v1 3335344 217 + 21726897 GTGTTTTTGAACTCATGGGCTGTCATCATTGAGACA--TTGAGTTTTCACTATATTGTTTAAATTGCTGCTACTT-AAAGTTATTATCTATTCTGCAAATTCA-TTTTTTAAAAAGTTTGACAATGTAGACACTGAAAGCAGAATTGTACTTTATGTGGAATTAATAAT--CAGT------TTAGGCTAGATTATTTAAATGCAGTGTCTGTAAGATTTTCATAAAAAT i colAng1.NW_012115488v1 C 0 I 70 s calJac3.chr2 81056914 224 - 204313951 GTGTTTTCAAACTCATTGGC---CATCATTGAGACACTCTGAATTTTCACCATATTGTTTAAATTGCTACCACTT-AACATTATTATCTGTTATGCAAATTCA-TTTTTTAAAAAGATTGACAATCTAGACACTGGAAGCAGAATTTCACTTTATTTGGAATTAATAATTCCAATAAATTATTAATGTCCATAAGTTAAATGCAATGTCCATAAGACTTTCATAAAAAT i calJac3.chr2 C 0 I 11 s saiBol1.JH378106 16062967 218 - 71252344 GCGTTTTCAAACTCATTGGC---CATCATTGAGACACTCTGAATTTTCACCATATTGTTTAAATTGCTACTATTTCAAAGTTATTATATGTTATGCAAATTCATTTTTTTAAAAAGATTGATGATCTAGATACTAGAAGCAGAATTTCACTTTATGTGGAATTAATAAT--CAAT------TTGGGCTGGATTAGTTAAATGCAATGTCCATAAGACTTTCATAAAAAT i saiBol1.JH378106 C 0 I 11 s cebCap1.NW_016107331v1 5396457 215 + 12262279 GTGTTTTCAAGCTCATTGGC---CATCATCGAGACACTCTGAATTTTCACCACATTGTTTAAATCGCTACCAAGT-AAAGTTATTATCTGTTATGCAAATTCA-TTTTTTAAAAAGATTGATAATCTAGATACTAGAAGCAGAATTTCACTTTATGTGGAATTAATAA---CAAT------TTGGGCTAGATTAGTTAAATGCAATGTCCATAAGACTTTCATAAAAAT i cebCap1.NW_016107331v1 C 0 I 75 s aotNan1.NW_018506370v1 4068680 215 + 15889662 GTGTTTTCAAACTCATTGGC---CATCATCAAGACACTCTGAATTTTCACCATATTATTTAAATTGCTACCACTA-AAAGTTATTATCTGTTGTGCAAATTCA--TTTTTAAAAAGATTGACAATCTAGATACTGGAAGCAGAATTTCACTTTATGTGGAATTAATAAT--CAAT------TTGGGCTAGATTAGTTAAATGCAATGTCCATAAGACTTTCATAAAAAT i aotNan1.NW_018506370v1 C 0 I 73 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=3276.000000 s hg38.chr3_KI270784v1_alt 133720 1 + 184404 t s panTro5.chr3 28465 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 21910 1 - 205426864 t i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 40259 1 + 508821 t i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44692278 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81697467 1 + 180051392 T i rheMac8.chr6 C 0 I 69 s macNem1.NW_012016021v1 17323917 1 - 20287406 T i macNem1.NW_012016021v1 C 0 I 69 s calJac3.chr2 81057149 1 - 204313951 T i calJac3.chr2 I 11 C 0 s saiBol1.JH378106 16063196 1 - 71252344 T i saiBol1.JH378106 I 11 C 0 e aotNan1.NW_018506370v1 4068895 73 + 15889662 I e cebCap1.NW_016107331v1 5396672 75 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3335561 70 + 21726897 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78955075 85 + 91010382 I e macFas5.chr6 16489 24429 - 181584905 I a score=32844.000000 s hg38.chr3_KI270784v1_alt 133721 28 + 184404 aaaattaaatcattaaaa------ttaaaaAATG s panTro5.chr3 28466 28 - 202621043 aaaattaaatcattaaaa------ttaaaaAATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 21911 28 - 205426864 aaaattaaatcattaaaa------ttaaaaAATG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 40260 28 + 508821 aaaactaaatcattaaaa------ttaaaaAATG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44692279 28 + 86207423 aaaattaaatctttaaaa------ttaaaaaatg i nomLeu3.chr21 C 0 C 0 s calJac3.chr2 81057150 31 - 204313951 AAAAT---AGCACTAGCATTTATTTTAAAAAATG i calJac3.chr2 C 0 I 26 s saiBol1.JH378106 16063197 31 - 71252344 AAAAT---ATCACTAGTATTTATTTTAAAAAATG i saiBol1.JH378106 C 0 C 0 e aotNan1.NW_018506370v1 4068895 73 + 15889662 I e cebCap1.NW_016107331v1 5396672 75 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3335561 70 + 21726897 I e rheMac8.chr6 81697468 69 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78955075 85 + 91010382 I e macNem1.NW_012016021v1 17323918 69 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=3160.000000 s hg38.chr3_KI270784v1_alt 133749 3 + 184404 TTG s panTro5.chr3 28494 3 - 202621043 TTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 21939 3 - 205426864 TTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 40288 3 + 508821 TTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44692307 3 + 86207423 ttg i nomLeu3.chr21 C 0 C 0 s saiBol1.JH378106 16063228 3 - 71252344 ATG i saiBol1.JH378106 C 0 I 23 e aotNan1.NW_018506370v1 4068895 73 + 15889662 I e cebCap1.NW_016107331v1 5396672 75 + 12262279 I e calJac3.chr2 81057181 26 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3335561 70 + 21726897 I e rheMac8.chr6 81697468 69 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78955075 85 + 91010382 I e macNem1.NW_012016021v1 17323918 69 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=277706.000000 s hg38.chr3_KI270784v1_alt 133752 337 + 184404 ggccgggagcggtggctcatgcctgtaaatcccagcactttgggaggccaacgcgggcggatcacgaggtcagcagatcgagaccatcccggctaacacggtgaaaccctgtctctactgaaaatgc-aaaaaaaattagcggggcgtggtggcgggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcgggaacccgggaggcagagcttgcagtgagccgagatcgggccgctgcactccagcctgggcgacagagcgcgactccgtctcaaaaataaataaatagataaatagataaataaataaataaataaa----aataaaaa s panTro5.chr3 28497 341 - 202621043 ggccgggagcggtggctcacgcctgtaaatcccagcactttgggaggccaacgcgggcggatcatgaggtcagcagatcgagaccatcccggctaacacggtgaaaccctgtctctactgaaaatgc-aaaaaaaattagccgggcatggtggtgggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccaggaggcagagcttgcagtgagccgagatcgcgccgctgcactccagcctgggcgacagagcgcgactccgtctcaaaaataaataaatagataaatagataaataaataaataaataaataaaaataaaaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 21942 329 - 205426864 ggccgggagcggtggctcacgcctgtaaatcccagcactttgggaggccaacgcgggcggatcacgaggtcagcagatcgagaccatcccggctaacacggtgaaaccctgtctctactgaaaatgc-aaaaaaaattagccgggcatggtggtgggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccaggaggcagagcttgcagtgagccgagatcgcgccgctgcactccagcctgggcgacagagcgcgactccgtctcaaaaataaataaatagataaataaataaataaataaa------------aataaaaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 40291 326 + 508821 ggccgggagcggtggctcacgcctgt-aatcccaacactttgggaggccaacgcaggcggatcacgaggtcagcagatcgagaccatcctggctaacacggtgaaaccc-gtctctactaaaaatacaaaaaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctattcgggaggctgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagccaagatcgcgccgctgcactccagcctgggcgacagagcgagactccgtctcaaaaataaataaatagataaatagataactaaata--------------aataaaAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44692310 335 + 86207423 ggccgggagcggtggctcacgcctgc-aatcccagcactttgggaggccgacacgggcggatcacgaggtcagcagatcgagaccatcccagctaacacggtgaaaccccgtctctactaaaaatac-aaaaaaaattagccgggcgtgctggcgggcgcctgtagtcccagctatttgggaggctgaggcaggagaacagcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcttgggcgacagagcgagactccgtctc-aaaataaataaataaataaataaatataaaaataaattaattaa----tataaaaa i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4068895 73 + 15889662 I e cebCap1.NW_016107331v1 5396672 75 + 12262279 I e calJac3.chr2 81057181 26 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16063231 23 - 71252344 I e colAng1.NW_012115488v1 3335561 70 + 21726897 I e rheMac8.chr6 81697468 69 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78955075 85 + 91010382 I e macNem1.NW_012016021v1 17323918 69 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=2412.000000 s hg38.chr3_KI270784v1_alt 134089 2 + 184404 tg s panTro5.chr3 28838 2 - 202621043 tg i panTro5.chr3 C 0 C 0 s panPan2.chr3 22271 2 - 205426864 tg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 40617 2 + 508821 TG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44692645 2 + 86207423 ta i nomLeu3.chr21 C 0 C 0 s calJac3.chr2 81057207 2 - 204313951 TA i calJac3.chr2 I 26 C 0 s saiBol1.JH378106 16063254 2 - 71252344 TA i saiBol1.JH378106 I 23 C 0 e aotNan1.NW_018506370v1 4068895 73 + 15889662 I e cebCap1.NW_016107331v1 5396672 75 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3335561 70 + 21726897 I e rheMac8.chr6 81697468 69 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78955075 85 + 91010382 I e macNem1.NW_012016021v1 17323918 69 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=6247.000000 s hg38.chr3_KI270784v1_alt 134091 2 + 184404 aa s panTro5.chr3 28840 2 - 202621043 aa i panTro5.chr3 C 0 C 0 s panPan2.chr3 22273 2 - 205426864 aa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 40619 2 + 508821 AA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44692647 2 + 86207423 aa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81697537 2 + 180051392 AA i rheMac8.chr6 I 69 C 0 s macNem1.NW_012016021v1 17323987 2 - 20287406 AA i macNem1.NW_012016021v1 I 69 C 0 s colAng1.NW_012115488v1 3335631 2 + 21726897 AA i colAng1.NW_012115488v1 I 70 C 0 s calJac3.chr2 81057209 2 - 204313951 AG i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16063256 2 - 71252344 AG i saiBol1.JH378106 C 0 C 0 e aotNan1.NW_018506370v1 4068895 73 + 15889662 I e cebCap1.NW_016107331v1 5396672 75 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78955075 85 + 91010382 I e macFas5.chr6 16489 24429 - 181584905 I a score=89031.000000 s hg38.chr3_KI270784v1_alt 134093 16 + 184404 aaaTGATGAAGTCAGG s panTro5.chr3 28842 16 - 202621043 aaaTGATGAAGTCAGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 22275 16 - 205426864 aaaTGATGAAGTCAGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 40621 16 + 508821 AAATGTTGAAGTCAGG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44692649 16 + 86207423 aaatGTTGAAGTCAGG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81697539 16 + 180051392 AAATGTTGAAGTCAGA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17323989 16 - 20287406 AAATGTTGAAGTCAGA i macNem1.NW_012016021v1 C 0 C 0 s colAng1.NW_012115488v1 3335633 16 + 21726897 AAATGTTGAAGTCAGA i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81057211 16 - 204313951 AAATGTTGAAGTCAGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16063258 16 - 71252344 AAATGTTGAAGTCAGA i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5396747 16 + 12262279 AAATGTTGAAGTCAGG i cebCap1.NW_016107331v1 I 75 C 0 s aotNan1.NW_018506370v1 4068968 16 + 15889662 AAATGTTGAAGTCAGA i aotNan1.NW_018506370v1 I 73 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78955075 85 + 91010382 I e macFas5.chr6 16489 24429 - 181584905 I a score=125183.000000 s hg38.chr3_KI270784v1_alt 134109 22 + 184404 CAGACTTATAAAGCTATCCTAT s panTro5.chr3 28858 22 - 202621043 CAGACTTATAAAGCTATCCTAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 22291 22 - 205426864 CAGACTTATAAAGCTATCCTAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 40637 22 + 508821 CAGACTTATAAAGCTATCCTAT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44692665 18 + 86207423 CAGACTTATAAAGCTATC---- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81697555 22 + 180051392 CAGACTTATAAAACTATCCTAT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17324005 22 - 20287406 CAGACTTATAAAACTATCCTAT i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78955160 22 + 91010382 CAGATTTATAAAACTATCCTAT i chlSab2.chr4 I 85 C 0 s colAng1.NW_012115488v1 3335649 22 + 21726897 CAGACTTATAAAACTCTCCTAT i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81057227 22 - 204313951 CACACTTATAAAGCTATACTAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16063274 21 - 71252344 CACACTTATAAAGCTATCCTA- i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5396763 22 + 12262279 CACACTTATAAAGCTATCCTAT i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4068984 22 + 15889662 CACACTTATAAAGCTATCCTAT i aotNan1.NW_018506370v1 C 0 I 138 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=79252.000000 s hg38.chr3_KI270784v1_alt 134131 16 + 184404 AATTTATGTGTCCTTT s panTro5.chr3 28880 16 - 202621043 AATTTATGTGTCCTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 22313 16 - 205426864 AATTTATGTGTCCTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 40659 16 + 508821 AACTTATGTGTCCTTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44692683 9 + 86207423 -------GTGTCCTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81697577 16 + 180051392 AATTTATGTGTCCTTT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17324027 16 - 20287406 AATTTATGTGTCCTTT i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78955182 16 + 91010382 AATTTATGTGTCCTTT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3335671 16 + 21726897 AATTTATGTGTCCTTT i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81057249 16 - 204313951 TATTTATGTGTCCTTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16063295 13 - 71252344 ---TTATGTGTCCTTT i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5396785 16 + 12262279 TATTTATATGTCCTTT i cebCap1.NW_016107331v1 C 0 I 5 e aotNan1.NW_018506370v1 4069006 138 + 15889662 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=47515.000000 s hg38.chr3_KI270784v1_alt 134147 29 + 184404 TGTCTATTATTTCAAATATGTATTTAAGT s panTro5.chr3 28896 29 - 202621043 TGTCTATTATTTCAAACATGTATTTAAGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 22329 29 - 205426864 TGTCTATTATTTCAAACATGTATTTAAGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 40675 29 + 508821 TGTCTATTATTTCAAATATGTATTTAAGT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44692692 29 + 86207423 TGTCAATTATTTCAAATATGTATTTAAGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81697593 25 + 180051392 CGCCAATTATTTCAAATATGTAT----GT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17324043 25 - 20287406 CGCCAATTATTTCAAatatgtat----gt i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78955198 29 + 91010382 CGCCAATTATTTCAAATATGTATGTAAGT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3335687 25 + 21726897 CACCAATTATTTCAAATATGTAT----GT i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81057265 5 - 204313951 ----AGTCA-------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16063308 5 - 71252344 ----AGTCA-------------------- i saiBol1.JH378106 C 0 C 0 e aotNan1.NW_018506370v1 4069006 138 + 15889662 I e cebCap1.NW_016107331v1 5396801 5 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=115384.000000 s hg38.chr3_KI270784v1_alt 134176 25 + 184404 ATTATAGCCTTTTTCCTACAA------------ACAT s panTro5.chr3 28925 25 - 202621043 ATTATAGCCTTTTTCCTACAA------------ACAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 22358 25 - 205426864 ATTAGAGCCTTTTTCCTACAA------------ACAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 40704 25 + 508821 ATTATAGCCTTTTTCCTACAA------------ACAT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44692721 25 + 86207423 ATTATAGCCTTTTTCCTACAA------------ACAT i nomLeu3.chr21 C 0 I 35 s rheMac8.chr6 81697618 25 + 180051392 ATTATAGCCTTTTTACTACAA------------ACAT i rheMac8.chr6 C 0 I 1 s macNem1.NW_012016021v1 17324068 25 - 20287406 attatagcctttttactacat------------atat i macNem1.NW_012016021v1 C 0 I 1 s chlSab2.chr4 78955227 25 + 91010382 ATTATAGCCTTTTTACTACAA------------ACAT i chlSab2.chr4 C 0 I 1 s colAng1.NW_012115488v1 3335712 36 + 21726897 ATTATAGCTTTTTT-CTacaaacacacacacacacaT i colAng1.NW_012115488v1 C 0 I 1 s calJac3.chr2 81057270 25 - 204313951 ATTATAGCCTTTTACATACAA------------ATAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16063313 25 - 71252344 ATTATAGTCTTTTACCTACAA------------ACAT i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5396806 25 + 12262279 ATTATAGCCTTTTACTTACAA------------ACAT i cebCap1.NW_016107331v1 I 5 C 0 e aotNan1.NW_018506370v1 4069006 138 + 15889662 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=1469574.000000 s hg38.chr3_KI270784v1_alt 134201 248 + 184404 TATATATATA------TAT--------------------CTAATATGTAAAACAAATAAAAAATGGAGTTTTTCTGATGAACACAGAAGAGGCAACTTG----AAAGACACTTCCCCAGTTTCCTTCTCATATAACTTGAC-------------TGATCCTGCAAAACCTCTACAGAATGTCATTGTTCCTTAGAACAGTACAAAACCCACCATCCTATTGTTGTTTCTGAACTGTACCCATTTCTTTATATGCCTCTTTCTGAACCATTTTCTTATCAAGACTGATGGTT----- s panTro5.chr3 28950 248 - 202621043 TATATATATA------TAT--------------------CTAATATGTAAAACAAATAAAAAATGGAGTTTTTCTGATGAACACAGAAGAGGCAACTTG----AAAGACACTTCCCCAGTTTCCTTCTCATATAACTTGAC-------------TGATCCTGCAAAACCTCTACAGAATGTCATTGTTCCTTAGAACAGTACAAAACCCACCATCCTATTGTTGTTTCTGAACTGTACCCATTTCTTTATATGCCTCTTTCTGAACCATTTTCTTATCAAGACTGATGGTT----- i panTro5.chr3 C 0 C 0 s panPan2.chr3 22383 248 - 205426864 TATATATATA------TAT--------------------CTAATATGTAAAACAAATAAAAAATGGAGTTTTTCTGATGAACACAGAAGAGGCAACTTG----AAAGACACTTCCCCAGTTTCCTTCTCATATAACTTGAC-------------TGATCCTGCAAAACCTCTACAGAATGTCATTGTTCCTTAGAACAGTACAAAACCCACCATCCTATTGTTGTTTCTGAACTGTACCCATTTCTTTATATGCCTCTTTCTGAACCATTTTCTTATCAAGACTGATGGTT----- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 40729 248 + 508821 TATATATATA------TAT--------------------CTAATATGTAAAACAAATAAAAAATGGAGTTTTTCTGATGAACACAGAAGAGGTAACTTG----AAAGACACTTCCCCAGTTTCCTTCTCATATAACTTGAC-------------TGATCCTGCAACACCTCTACAGAATGTCATTGTTCCTTAGAACAGTACAAAACCCACCATCCTATTGTTGTTTCTGAACTGTACCCATTTCTTTATATGCCTCTTTCTGAACCATTTTCTTATCAAGACTGATGGTT----- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44692781 248 + 86207423 tatatatata------tat--------------------CCAATATGTAAAACAAATAAAAAATGGAGTTTTTCTGATGAACACAGAAGAGGCAACTGG----AAAGACACTTCCCCAGTTTCCTTCTCATATAACTTGAC-------------TGATCCTGCAACACCTCTACGGAATGTCATTGTTCCTTAGAACAGTACAAAACCCACCATCATATTGTTGTTTCTGAACTATACCCATTTCTTTATATGCCTCTTTCTGAACCATTTTCTTATCAAGACTGATGGTT----- i nomLeu3.chr21 I 35 C 0 s rheMac8.chr6 81697644 263 + 180051392 TATATATATATCTCTCTCT--------------------CCAATATGTAAAAC----AAAAAATGAATTTTTTCTGATGAACACAGGAAAAGCAGCTTG----AAAGATACTTTCCCAGTTTCCTTCTCATATAACTTGACTATGTAACTTGATTGATCCTGCAACACCTCCACACAATGTCATTGTTCCTTAGAACAGTACAAAACCTACTATCCTGTTGTTGTTTCAGAACTGTACCCATTTCTTTATATGCCTCTTTCTGAACCATTTTCTTATCAAGTCTGATGGTT----- i rheMac8.chr6 I 1 I 511 s macNem1.NW_012016021v1 17324094 257 - 20287406 tatatatata------tCT--------------------Ccaatatgtaaaac----aaaaaatgaagtttttctgatgaacacaggaaaagcagcttg----aaagatactttcccagtttccttctcatataacttgactatgtaacttgattgatcctgcaacacctccacacaatgtcattgttccttagaacagtacaaaacctactatcctaTTGTTGTTTCAGAACTGTACCCATTTCTTTATATGCCTCTTTCTGAACCATTTTCTTATCAGGTCTGATGGTT----- i macNem1.NW_012016021v1 I 1 I 464 s chlSab2.chr4 78955253 255 + 91010382 TATATATA--------TCT--------------------CCAATATGTAAAAC----AAAAAATGAAGTTTTTCTGATGAACACAGGAAAAGCAGCTTG----AAAGATACTTTCCCAGTTTCCTTCTCATATAACTTGACTATATAACTTGATTGATCCTGCAACACCTCTACACAATGTCATTGTTCCTTAGAACAGTACAAAACCTACTATCCTATTGTTGTTTCAGAACTGTACCCATTTCTTTATATGCCTCTTTCTGAACCATTTTCTTATCAAGTCTGATGGTT----- i chlSab2.chr4 I 1 I 497 s colAng1.NW_012115488v1 3335749 261 + 21726897 TATATATATA------TCT--------------------CCAATATATAAAACAAATAAAAAATTAAGGTTTTCTGATGAACACAGGAAAAGCAGCTTG----AAAGATACTTTCCCACTTTCCTTCTCATATAACTTGACTATATAACTTGACTGATCCTGCAACACCTCTACACAATGTCATTGTTCCTTAGAACAGTATAAAACCTACTGTCCTATTGTTGTTTCAGAACTGTACCCATTTCTTTATATGCCTCTTTCTGAACCATTTTCTTATCAAGTCTGATGGTT----- i colAng1.NW_012115488v1 I 1 I 495 s calJac3.chr2 81057295 267 - 204313951 --TACATATA------TAT---TGGGGATGTATATATCTCCAATATGTAAAACAAAT-AAAATTTGAGTTTTTCTGATGAACACAGGAGAAGCAGCTTG----AATAACACTTTCCCAGTTTTCTTTTCATGTAACTTGAC-------------TGATCCTGCAATACCTTTACAGAATGTCATTGTTCCTTGGAACAGTACAAAAACCACTATTCTATTGTAGTTTCTGAACTGTACCCATTTCTTTACATGCCTCTTTCTGAACTATCTTCCTATCAAGTCTAATGGTTAGGTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16063338 270 - 71252344 --TTTAtgtg------tgtgtgtgtgtgtgtgtgtgtATCCAATACGTAAAACAAAC-AAAAATGTAGTTTTTCTGATGAACACAGGAGAAGCAGCTTG----AATAACACTTTCCCAGTTTTCTTTTCATATAACTTGAC-------------TGATCCTGCAATAACTCTACAGAATGTCATTGTTCCTTAGAACAGTACAAAAGCCACTGTTCTATTGTAGTTTCTGAACTGTACCCATTTCTTTATATGCCTCTTTCTGAACTATCTTCTTATCAAGTCTAATGGTTAGGTT i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5396831 254 + 12262279 --TATATATA------TAT--------------------CCAATATGTAAAACAAAT-AAAAATGGAGTTTTTCTGATGGACACAGGAGAAGCAGCTTGAATAAATAACAGTTTCCCAGTTTTCTTTTCATATAACTTGAC-------------TGATCCTGCAATACCTCTACAGAATGTCATTGTTCCTTAGAACAGTACAAAACCCATTGTTCTATTGTAGTTTCTGAACTGTACCCATTTCTTTATATGCCTCTTTCTGAACTATCTTCTTATCAAGTCTAATGGTTAGGTT i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4069144 252 + 15889662 tatatatata------tat--------------------CCAATATGTAAAACAAAT-AAAAATGGAGTTTTTCTGATGAACATAGGAGAAGCAGCTTG----AATAACACTTTCCCAGTTTTCTTTTCATGTAACTTGAC-------------TGATCCTGCAATACTTCTACAGAATGTCATTGTTCCTTAGAACAGTACAAAAACCACTATTCTATTGTAGTTTCTGAACTGTACCCATTTCTTTATATGCCTCTTTCTGAACTATCTTCTTATCAAGTCTAATGGTTAGGTT i aotNan1.NW_018506370v1 I 138 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=72964.000000 s hg38.chr3_KI270784v1_alt 134449 23 + 184404 CTTTGTTACTGAATGAAAAGAAT s panTro5.chr3 29198 23 - 202621043 CTTTGTTACTGAATGAAAAGAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 22631 23 - 205426864 CTTTGTTACTGAATGAAAAGAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 40977 23 + 508821 CTTTGTTACTGAATGAAAAGAAT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44693029 23 + 86207423 CTTTGTTACTGCATGAAAAGAAT i nomLeu3.chr21 C 0 I 113 s calJac3.chr2 81057562 23 - 204313951 CTTTGTTACTGAATGAAAAGAAT i calJac3.chr2 C 0 I 113 s saiBol1.JH378106 16063608 23 - 71252344 CTTTGTTACTGAATGAAAAGAAT i saiBol1.JH378106 C 0 I 113 s cebCap1.NW_016107331v1 5397085 23 + 12262279 CTTTGTTACTGATTGGAAAGAAT i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4069396 23 + 15889662 CTTTGTTACTGAATGAAAAGAAT i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3336010 495 + 21726897 I e rheMac8.chr6 81697907 511 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78955508 497 + 91010382 I e macNem1.NW_012016021v1 17324351 464 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=6876.000000 s hg38.chr3_KI270784v1_alt 134472 2 + 184404 AC s panTro5.chr3 29221 2 - 202621043 AC i panTro5.chr3 C 0 C 0 s panPan2.chr3 22654 2 - 205426864 AC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 41000 2 + 508821 AC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44693165 2 + 86207423 AC i nomLeu3.chr21 I 113 C 0 s calJac3.chr2 81057698 2 - 204313951 AC i calJac3.chr2 I 113 C 0 s saiBol1.JH378106 16063744 2 - 71252344 AC i saiBol1.JH378106 I 113 C 0 s cebCap1.NW_016107331v1 5397108 2 + 12262279 AC i cebCap1.NW_016107331v1 C 0 I 120 s aotNan1.NW_018506370v1 4069419 2 + 15889662 AC i aotNan1.NW_018506370v1 C 0 I 118 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3336010 495 + 21726897 I e rheMac8.chr6 81697907 511 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78955508 497 + 91010382 I e macNem1.NW_012016021v1 17324351 464 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=6462.000000 s hg38.chr3_KI270784v1_alt 134474 5 + 184404 CCACG s panTro5.chr3 29223 5 - 202621043 CCACG i panTro5.chr3 C 0 C 0 s panPan2.chr3 22656 5 - 205426864 CCACG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 41002 5 + 508821 CCACA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44693167 5 + 86207423 CCACG i nomLeu3.chr21 C 0 C 0 s calJac3.chr2 81057700 5 - 204313951 CCAGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16063746 5 - 71252344 CCAGA i saiBol1.JH378106 C 0 C 0 e aotNan1.NW_018506370v1 4069421 118 + 15889662 I e cebCap1.NW_016107331v1 5397110 120 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3336010 495 + 21726897 I e rheMac8.chr6 81697907 511 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78955508 497 + 91010382 I e macNem1.NW_012016021v1 17324351 464 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=5348.000000 s hg38.chr3_KI270784v1_alt 134479 2 + 184404 CT s panTro5.chr3 29228 2 - 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chr3 22661 2 - 205426864 CT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 41007 2 + 508821 CT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44693172 2 + 86207423 CT i nomLeu3.chr21 C 0 C 0 s calJac3.chr2 81057705 2 - 204313951 CT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16063751 2 - 71252344 CT i saiBol1.JH378106 C 0 C 0 s aotNan1.NW_018506370v1 4069539 2 + 15889662 CT i aotNan1.NW_018506370v1 I 118 C 0 e cebCap1.NW_016107331v1 5397110 120 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3336010 495 + 21726897 I e rheMac8.chr6 81697907 511 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78955508 497 + 91010382 I e macNem1.NW_012016021v1 17324351 464 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=69663.000000 s hg38.chr3_KI270784v1_alt 134481 22 + 184404 TTAGCCTATGTAGAGTTGtgtt s panTro5.chr3 29230 22 - 202621043 TTAGCCTATGTAGAGTTGtgtt i panTro5.chr3 C 0 C 0 s panPan2.chr3 22663 22 - 205426864 TTAGCCTATGTAGAGTTGtgtt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 41009 22 + 508821 TTAGCCTATGTAGAGTTGtgtt i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44693174 22 + 86207423 TTAGCCTATGTAGAGTTGtgtt i nomLeu3.chr21 C 0 C 0 s calJac3.chr2 81057707 22 - 204313951 TTAGCCTATATAGAGTTGtgct i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16063753 22 - 71252344 TTAGCCTATATAGAGTTGGgtt i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5397230 22 + 12262279 TTAGCCTATGTAGAGTTGtgtt i cebCap1.NW_016107331v1 I 120 C 0 s aotNan1.NW_018506370v1 4069541 22 + 15889662 TTAGCCTATATAGAGTTGtgtt i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3336010 495 + 21726897 I e rheMac8.chr6 81697907 511 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78955508 497 + 91010382 I e macNem1.NW_012016021v1 17324351 464 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=4664.000000 s hg38.chr3_KI270784v1_alt 134503 1 + 184404 a s panTro5.chr3 29252 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 22685 1 - 205426864 a i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 41031 1 + 508821 a i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44693196 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81698418 1 + 180051392 a i rheMac8.chr6 I 511 C 0 s macNem1.NW_012016021v1 17324815 1 - 20287406 a i macNem1.NW_012016021v1 I 464 C 0 s chlSab2.chr4 78956005 1 + 91010382 a i chlSab2.chr4 I 497 C 0 s calJac3.chr2 81057729 1 - 204313951 a i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16063775 1 - 71252344 a i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5397252 1 + 12262279 g i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4069563 1 + 15889662 a i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3336010 495 + 21726897 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=3914089.000000 s hg38.chr3_KI270784v1_alt 134504 659 + 184404 aaagaaaaatcttaaatttaacagaatttaatcaagcaaagaacgattcacaaattgggcagccgctgaaccaaaatacgttcagagatgatccagtgctgtctcttggtcaaagaagattcatggatagaaaaaggaaagtgacatagagaaaacggaagtgaagtaccaaaacag-----------acaatttggcttttgccttacttta--acagttgtaacagttggccatctttgattggctgaaactcggtgattggcacaacagtagattacagtctgtttacacattcagttagatatagttcactatgtacaaagaaatcattaagccgaatttaaaatatgtaaggaggcagcgttaggttaaac-----ttaaCAGTTGTATTAAGTTAGCCATCAAATCAGAATTAGCATTTTCTTCCTTTTACTTAAATTCTTCTTCACTGTTTTATTATCAGTGTCTTTTGGTCTTTTCATCTACTTGTGCAA--AACTCTGCGTTGATGCTTTAGTGCTCTCAGTATCTTCCCATGTTCTTGACATCCTGATCCTGATACTTTTAAGTAATATAAAAGGTGCC-TTCTTGGATGTCAGGTGTCCTGAAAGAGGACACTGTCATCTTGCTCAACCATCATTGAGAATGCTTCAGGAAATGGCCTTTTGGTGTCCT s panTro5.chr3 29253 660 - 202621043 aaagaaaaatcttaaatttaacagaatttaatcaagcaaagaacgattcacaaattgggcagcccctgaaccaaaatacgttcagagatgatccagtgctgtctcttggtcaaagaagattcatggatagaaaaaggaaagtgacatagagaaaacggaagtgaagtaccaaaacag-----------acaatttggcttttgccttatttta--acagttgtaacagttggccatctttgattggctgaaactcggtgattggcacaacagtagattacagtctgtttacacattcagttagatatagttcactatgtacaaagaaatcattaagccgaatttaaaatatgtaaggaggcagcgttaggttaaac-----ttaaCAGTTGTATTAAGTTAGCCATCAAATCAGAATTAGCATTTTCTTCCTTTTACTTAAATTCTTCTTCACTGTTTTATTACCAGTGTCTTTTGGTCTTTTCATCTACTTGTGCAA--AACTCTGCGTTGATGCTTTAGTGCTCTCAGTATCTTCCCATGTTCTTGACATCCTGATCCTGATACTTTTAAGTAATATAAAAGGTGCCCTTCTTGGATTTCAGGTGTCCTGAAAGAGGACACTGTCATCTTGCTCAACCATCATTGAGAATGCTTCAGGAAATGGCCTTTTGGTGTCCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 22686 660 - 205426864 aaagaaaaatcttaaatttaacagaatttaatcaagcaaagaacgattcacaaattgggcagcccctgaaccaaaatacgttcagagatgatccagtgctgtctcttggtcaaagaagattcatggatagaaaaaggaaagtgacatagagaaaacggaagtgaagtaccaaaacag-----------acaatttggcttttgccttatttta--acagttgtaacagttggccatctttgattggctgaaactcggtgattggcacaacagtagattacagtctgtttacacattcagttagatatagttcactatgtacaaagaaatcattaagccgaatttaaaatatgtaaggaggcagcgttaggttaaac-----ttaaCAGTTGTATTAAGTTAGCCATCAAATCAGAATTAGCATTTTCTTCCTTTTACTTAAATTCTTCTTCACTGTTTTATTACCAGTGTCTTTTGGTCTTTTCATCTACTTGTGCAA--AACTCTGCGTTGATGCTTTAGTGCTCTCAGTATCTTCCCATGTTCTTGACATCCTGATCCTGATACTTTTAAGTAATATAAAAGGTGCCCTTCTTGGATTTCAGGTGTCCTGAAAGAGGACACTGTCATCTTGCTCAACCATCATTGAGAATGCTTCAGGAAATGGCCTTTTGGTGTCCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 41032 656 + 508821 aaagaaaaatcttaaatttaacagaatttaatcaagcaaagaacgattcacaaattgggcagcccctgaaccaaaatacgttcagagatgatccagtgctgtctcttggtcaaagaagattcatggatagaaaaaggaaagtgacatagagaaaacggaagtgaagtaccaaaacag-----------acaatttggcttttgccgtatttta--acagttgtaacagttggccatct----ttggctgaaactcggtgattggcacaagagtagattacagtctgtttacacattcagttagatatagttcactatgtacaaagaaatcattaagccgaatttaaaatatgtaaggaggcagcgttaggttaaat-----ttaaCAGTTGTATTAAATTAGCCATCAAATCAGAATTAGCATTTTCTTCCTTTTACTTAAATTCTTCTTCACTGTTTTATTATCAGTGTCTTTTGGTCTTTTCATCTACTTGTGTAA--AACTGTGCGTTGATGCTTTAGCGCTCTCATTATATTCCCATGTTCTTGACATCCTGATCCTGATACTTTTAAGTAATATAAAAGGTGCCCTTCTTGGATTTCAGGTGTCCTGAAAGAGGACACTGTCATCTTGCTCAACCATCATTGAGAATGCTTCAGGAAATGGCCTTTTGGTGCCCT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44693197 659 + 86207423 aaagaaaaatcttaaatttaacagaatttaatcaagcaaagaacaattcacaaattgggcagcccctgaaccaaaatagattcagagatgatccagtgctgtctcttggtcaaagaagattcatgggtagaaaaaggaaagtgacatggagaaaatggaagtgaagtaccaaaacag-----------acaatttggcttttgccttatttta--acagttttaacagttggccatcttct-ctggctgaaactcggtgattggcacaagagtaaattacagtctgtttacacattcagttagatataattcactatgtacaaagaaatcaccaggctgaatttaaaatatgtaaggaggcagcgttaggttaaac-----ttaaCAGTTGTATTAAGTTAGCCATCAAATCAGAATTAGCATTTTCTTCCTTTTACTTAAATTCTTCTTCAGTGTTTTATTATCAGTGTCTTTTGGTCTTTTCATCTATTTGTGTAA--AACTCTGCATTGATGCTTTAGTGCTCTCAGTATCTTCCCCTGTTCTTGACATCCTGACTCTGATACTTATAAGTAATATAAAAGGTGCCCTTCTTGGATTTCAGGTGTCCTGAAAGAGGACAGTGTCATCTTGCTCAACCATCATCGAGAATGCTTCAGGAAACGGCCTTTTGCTGTCCT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81698419 670 + 180051392 aaagaaaaaccttaaatttaacagaatttaatcaagcaaagaatgattcacaaattgggcagcccctgaaccaaaataggttcagagatgatccagtgctgtctctcagtcaatgaagattcgtggatagaaaaaggaaaatgacatagagaaaatgtaagtgaagtactgaaacagccacatggatgacaatttggcttctgccttattttaacacagttttaacaattggccatcattgattggctgaaactcagtgattggcacaagggtagattatggtctgtttacacatccggttagatatagttcactatgtacaaagaaatcgtgaggctgaatttaaaatatgtaaggaggcagcgttaggttaaac-----ttaaCAGTTGTACTAAGTTAGTTACCAAATCAGGGTTAGCATGTTCTTCCTTTTACTTAAA---TTCTTCACTGTTTTATTATCAGTGTCTTTTGTTCTTTTCATCTACTTGTGTAA--AGCTCTACGTTGACGCTTTAGTGCTGTCAATACTGTCCCATGTTCTTGACATCCTGATTTTGATACTTTTAAGTAATATGAAAGATGCCTTTCTTGGATTTCAGGTGTCCTGAAAGAGGACGTTGTCATCTTGTTCAGCCATCATTGAGAATGCTTCAGGAAATGGTCTTTTGCTGTCCT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17324816 670 - 20287406 aaagaaaaaccttaaatttaacagaatttaatcaagcaaagaatgattcacaaattgggcagcccctgaaccaaaataggttcagagatgatccagtgctgtctctcagtcaatgaagattcgtggatagaaaaaggaaaatgacatagagaaaatgtaagtgaagtactgaaacagccacatggatgacaattgggcttctgccttattttaacacagttttaacaattggccatcattgattggctgaaactcagtgattggcacaagagtagattatggtctgtttacacatccggttagatatagttcactatgtacaaagaaatcgtgaggctgaatttaaaatatgtaaggaggcagcgttaggttaaac-----ttaaCAGTTGTACTAAGTTAGTTACCAAATCAGGGTTAGCATGTTCTTCCTTTTACTTAAA---TTCTTCACTGTTTTATTATCAGTGTCTTTTGTTCTTTTCATCTACTTGTGTAA--AGCTCTACGTTGACACTTTAGTGCTGTCAATACTGTCCCATGTTCTTGACATCCTGATTTTGATACTTTTAAGTAATATGAAAGATGCCTTTCTTGGATTTCAGGTGTCCTGAAAGAGGACGTTGTCATCTTGTTCAGCCATCATTGAGAATGCTTCAGGAAATGGTCTTTTGCTGTCCT i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78956006 680 + 91010382 aaagaaaaaccttaaatttaacagaatttaatcaagcaaagaatgattcacaaattgggcagcccctgaaccaaaataggttcagagatgatctagtgctgtctctcagtcaatgatgattcgtggatagaaaaagaaaaatgacatagagaaaatgtaagtgaagtactgaaacagccacatggatgacaatttggcttctgccttattttaacacagttttaacaattggtcatcattgattggctgaaactcagtgattggcacaagagtagattacagtccgtttacacatccggttagatatagttcactatgtacaaagaaatcgtgaggctgaatttaaaatatgtaaggaggcagcgttaggttaaacttaatttaacaGTTGTACTAAGTTAGGCATCAAATCAGGGTTAGCATGTTCTTCGTTTTACTTAAATTCTTCTTCACTGTTTTATTATCAGTGTCTTTTGTTCTTTTCATCTACTTGTGTAAATAGCTCTACGTTGACGCTTTAGTGCTCTCAATACTGTCCCATGTTCTTGACATCCTGATTTTGATACTTTTAAGTAATATGAAAGATGCCTTTCTTGGATTTCAGGTGTCCTGAAAGAGGACGTTGTCATCTTGTTCAGCCATCATTGAGAATGCTTCAGGAAATGGTCTTTTGCTGTCCT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3336505 662 + 21726897 aaagaaaaaccttaaatttaacagaatttaatcaagcaaagaacgattcacaaattgggcagcccctgaaccaaaataggttcagagatgatccagtgctgtctctcagtcaatgaagattcgtagatagaaaaaggaaagtgacatagagaaaatggaagtgaagtactgaaagagccacatggataacaatttggcttctgccttattttaacacagttttaacaatt----------------ctgaaactcagtgattggcacaagagtagattacggtctgtttacacatccggttagatatagttcactatgtacaaagaaatcgttaggctgaatttaaaatgtgtaaagaggcagcgttaggttaaacttaatttaacaGTTGTATTAAGTTAGGCATCAAATCAGGGTTAGCATGTTCTTCCTTTTACTTAAATTCTTCTTCACTGTTTTATTATCAGTGTCTTTTGTTCTTTTCATCTACTTGTGTAA--AGCTCTACTTTGATGCTTTAGTGCTCTCAATACCGTCCCATGTTCTTGACATCCTGATTTTGATACTTTTAAGTAATATGAAAGATGCCTTTCTCGGATTTCAGGTGTCCTGAAAGAGGACGTTGTCATCTTGTTCAACCATCATTGAGAATGCTTCAGGAAATGGTCTTTTGCTGTCCT i colAng1.NW_012115488v1 I 495 I 1 s calJac3.chr2 81057730 659 - 204313951 aaagaaaaaccttaaatttaacagaatttaaccaggcaaaggatgattcacgaattgggcagttcctggactaaaatagattcagagacagtccagtgctatgtctt-----aagaagattcatctatagagaaatgaatgtgacatagagaaaacagaagtgaggtactgaaacagccagatgaataacaatttggattttgtcttattttaatatggttttagtagtttgctatcattgattggctaaaactcgatgattggcacaaaagtagattat-----------acatccagttagataaagttcactatgtacaaagaaattatgtgattgaattaaaaatataaaaggaaacagattta-gttaaatttaatttaacaGTTATATTCAGTTAGGCATCAAATC--AGTTAGCATTTTCTTCCTTTTGCTTAAATTCTTCCTCACTGTTTTATTATCAGTGCCTCTCGGTCTTTTTGACTACTTGTGTAA--AACTCTACGTTGATGCTTTAGTGCTCTCAGTACCTTCCCATGTTCTTGACATCCTGATCCTGATACTTTTAAGTAATATAAAAGATGCCATTTTTGGATTTCTGGTGTCATGAAGGAGGACATTGTCATCTTGCTCAGCCGTCATTGAGAATGCTTCAGGAAATGGCCTTTTGGTGTCCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16063776 666 - 71252344 aaagaaaaaccttaaatttaacagaatttaatcaagcaaaggacgattcacgaattgggcagttcctgagctaaaatagattcagagacagtccagtgctatctcttggtcaaagaagattcatggatagagaaaggaatgtgacatggagaaaacagaagtgaggtattcaaacagccagatcaataacaatttggattttgtcttattttaatacagttttaatagtttgccatctttgattggctaaaactcagtgattggcacaaaaatagattac-----------acatccagttagatcaagttcactgtgtacaaataaatcattaggttgaattaaaaatatataagaaggcagattta-gttaaacttaatttaacaGTTATATTCAGTTAGGCATCAAATCAGAGTTAGCATTTTCTTCCTTTTGCTTAAATTCTTCCTCACTGTTTTATTATCAGTGTCACTTGGTCTTTTTATCTACTTGTGTAA--AACTCTATGTTGATGCTTTAGTGCTCTCAATACCTTCCCATGTTCTTGATATCCTGATCTTGATACTTTTAAGTAATATAAAAGATACCATTCTTGGATTTCTGGTGTCATGAAGGAGGACATTGTCATCTTGCTCAGCCCTCATTGCAAATGCTTCAGGAAATGGCCTTTTGGTGTCCT i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5397253 663 + 12262279 aaagaaaaaccttaaatataacaaaatttaatcaagcaaaggacgattcacaaattgggcagttcctgaactaaaataggttcagagacagtccagtgctctctcttggta-aagagggttcatggatagagaaatgaatgtggtatagagaaaacagaagtgaagtactgaaacagccaggtaaataacaatttggattttgtcttattttagtacagttttaatagtttgctatctttgattggctaaaactcgataattggcacaaaagtagattat-----------acatccagttagataaagttcactatgtacaaagaaatcattcaactgaattaaaaatatacaaggaggcagattta-gttaaatttaatttaacaGTTATATTCAGTTAGGCATCAAATC--AGTTAGCATTTTCTTCCTTCTGCTTAAATTCTTCCTCACTGTTTTATTATCAGTGCCTCTTAGTCTTTTTAACTACTTGTGTAA--AACTCTACATTGATGCTTTAGTGCTCTCAATACCTTCCCATGTTCTTGACATCCTGATTCTGACACTTTTAAGTAATATAAAAGGTGCCATTCTTGGATTTCTGGTGTCATGAAGGAGGACATTGTCATCTTGCTCAGCCCTCATTGCGAATGCTTCAGGAAATGGCCTTTTGGTGTCCT i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4069564 664 + 15889662 aaagaaaaaccttaaatttaacagaatttaatcaagcaaagaatgattcacgaattgggcagttcctgaactaaaataggttcagagacagtccagtgctatctcttggtcaaagaagattcatggatagagaaatgaatgtgacatagagaaaacagaagtgaggtactgaaacagccagatgaataacaatttggattttatcttattttagtacagttttaatagtttgctatctttgattggctaaaacttgatgattggcacaaaagtagattat-----------acatccagttagataaagttcactatgtacaaagaaatcattcgattgaattaaaaatatactaggaggcagattta-gttaaatttaatttaacaGTTATATTCAGTTAGGCATCAAATC--AGTTAGTATTTTCTTCCTTTTGCTTAAATTCTTCCTCACTGTTTTATTATCAGTGGCTCTTGGTCTTTTTAACTACTTGTGTAA--AACTCTACGTTGATGCTTTAGTGCTCTCAATACCTTCCCATGTTCTTGACATCCTGATCCTGATACTTTTAAGTAATATAAAAGATGCCATTCTTGGATTTCTGGTGTCATGAAGGAGGATATTGTCATCTTGCTCAGCCATCATTGAGAATGCTTCAGGAAATGGCCTTTTGGTGTCCT i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=36638.000000 s hg38.chr3_KI270784v1_alt 135163 19 + 184404 ATCTTTACCTAGCACCCAT s panTro5.chr3 29913 19 - 202621043 ATCTTTACCTAGCACCCAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 23346 19 - 205426864 ATCTTTACCTAGCACCCAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 41688 19 + 508821 ATCTTTACCTAGCACCCAT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44693856 19 + 86207423 ATCTTTACCTAGCACCCAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81699089 1 + 180051392 -----------------A- i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17325486 1 - 20287406 -----------------A- i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78956686 1 + 91010382 -----------------A- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 81058389 19 - 204313951 ATGTTTACCTAGCACCCAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16064442 19 - 71252344 ATGTTTACCTAGCACCCAT i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5397916 19 + 12262279 ATGTTTACCTAGCACCCAT i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4070228 19 + 15889662 ATGTTTACTTAGCACCCAT i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3337167 1 + 21726897 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=247965.000000 s hg38.chr3_KI270784v1_alt 135182 35 + 184404 TTCTCTTTCAGCAATTTAGTGTCCTGAAATAGCCA s panTro5.chr3 29932 35 - 202621043 TTCTCTTTCAGCAATTTAGTGTCCTGAAATAGCCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 23365 35 - 205426864 TTCTCTTTCAGCAATTTAGTGTCCTGAAATAGCCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 41707 35 + 508821 TTCTCTTTCAGCAATTTAGTGTCCTGAAATAGCCA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44693875 35 + 86207423 TTCTCTTTCAGCAATTTAGTGTCCTGAAATAGCCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81699090 35 + 180051392 TTCTCTTTCAGAAATTTAGTGTCCTGAAATAGCCA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17325487 35 - 20287406 TTCTCTTTCAGAAATTTAGTGTCCTGAAATAGCCA i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78956687 35 + 91010382 TTCTCTTTCAGAAATTTAGTGTCCTGAAATAGCCA i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3337168 35 + 21726897 TTCTCTTTCAGCAATTTAGTGTCCTGAAATAGCCA i colAng1.NW_012115488v1 I 1 I 606 s calJac3.chr2 81058408 35 - 204313951 TTCTCTTTCAGCAATTTAGTGTCTTGAAATAGCCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16064461 35 - 71252344 TTCTCTTTCAGCAATTTAGTGTCCTGAAATAACCA i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5397935 35 + 12262279 TTCTCTTTCAGCAATTTAGTGTCCTGAAATAGCCA i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4070247 35 + 15889662 TTCTCTTTCAGCAATTTAGTGTCCTGAAATAGCCA i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=6600.000000 s hg38.chr3_KI270784v1_alt 135217 1 + 184404 G s panTro5.chr3 29967 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 23400 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 41742 1 + 508821 G i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44693910 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81699125 1 + 180051392 G i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17325522 1 - 20287406 G i macNem1.NW_012016021v1 C 0 I 604 s chlSab2.chr4 78956722 1 + 91010382 G i chlSab2.chr4 C 0 I 603 s calJac3.chr2 81058443 1 - 204313951 G i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16064496 1 - 71252344 G i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5397970 1 + 12262279 G i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4070282 1 + 15889662 G i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3337203 606 + 21726897 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=22068.000000 s hg38.chr3_KI270784v1_alt 135218 8 + 184404 ATGCTGTT s panTro5.chr3 29968 8 - 202621043 ATGCTGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 23401 8 - 205426864 ATGCTGTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 41743 8 + 508821 ATGCTGTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44693911 6 + 86207423 ATGCTA-- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81699126 8 + 180051392 TGACTGTT i rheMac8.chr6 C 0 C 0 s calJac3.chr2 81058444 8 - 204313951 ATGCTGTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16064497 8 - 71252344 ATGCTGTT i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5397971 8 + 12262279 ATGCTGTT i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4070283 8 + 15889662 ATGCTGTT i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3337203 606 + 21726897 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78956723 603 + 91010382 I e macNem1.NW_012016021v1 17325523 604 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=4095.000000 s hg38.chr3_KI270784v1_alt 135226 1 + 184404 A s panTro5.chr3 29976 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 23409 1 - 205426864 A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 41751 1 + 508821 A i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81699134 1 + 180051392 A i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 78957326 1 + 91010382 a i chlSab2.chr4 I 603 C 0 s calJac3.chr2 81058452 1 - 204313951 A i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16064505 1 - 71252344 A i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5397979 1 + 12262279 A i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4070291 1 + 15889662 A i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3337203 606 + 21726897 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macNem1.NW_012016021v1 17325523 604 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44693917 0 + 86207423 C a score=35189.000000 s hg38.chr3_KI270784v1_alt 135227 6 + 184404 TTTACT s panTro5.chr3 29977 6 - 202621043 TTTACT i panTro5.chr3 C 0 C 0 s panPan2.chr3 23410 6 - 205426864 TTTACT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 41752 6 + 508821 TTTACT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81699135 6 + 180051392 TTTACT i rheMac8.chr6 C 0 I 678 s macNem1.NW_012016021v1 17326127 6 - 20287406 TTTACT i macNem1.NW_012016021v1 I 604 C 0 s chlSab2.chr4 78957327 6 + 91010382 TTTACT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3337809 6 + 21726897 TTTACT i colAng1.NW_012115488v1 I 606 C 0 s calJac3.chr2 81058453 6 - 204313951 TTTACT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16064506 6 - 71252344 TTTATT i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5397980 6 + 12262279 TTTACT i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4070292 6 + 15889662 TTTACT i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44693917 0 + 86207423 C a score=285079.000000 s hg38.chr3_KI270784v1_alt 135233 80 + 184404 CTATCCTTAAGCAGAAGAAATATCTTTATTTAAAAAAATTTTTTTTTATATAT------TAAAAAAACCTAAAATACAAAA-AATGa s panTro5.chr3 29983 80 - 202621043 CTATCCTTAAGCAGAAGAAATATCTTTATTTTTTAAATTATTTTTTTATATAT------TAAAAAAACCTAAAATACAAAA-AATAa i panTro5.chr3 C 0 C 0 s panPan2.chr3 23416 76 - 205426864 CTATCCTTAAGCAGAAGAAATATCTTTATTTTTAAA---TTTTTTTTATATAT------T-AAAAAACCTAAAATACAAAA-AATAa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 41758 80 + 508821 CTATCCTTAAGCAGAAGAAATATCTTTATTTTTTAAATTATTTTTTTGTATAT------TAAAAAATCCTAAAATACAAAA-AATAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44693917 78 + 86207423 -TATCCTTAAGCAGAAGAAATATCTTTATTTTTTAAATTA-TTTTTTATATAT------TAAAAAATCCCAAAATACAAAA-AATAA i nomLeu3.chr21 C 0 C 0 s macNem1.NW_012016021v1 17326133 82 - 20287406 CTATCCTT-AGCAGAAGAAATATCTTTATTTTTTAAATTA--TTTTTATATATATATTTTAAAAATTCTTAAAATAC-AAA-AAtaa i macNem1.NW_012016021v1 C 0 I 1 s chlSab2.chr4 78957333 85 + 91010382 CTATCCTTAAGCAGAAGAAATATCTTTATTTTTTAAATTA-TTTTTTATATATTTTTTTTAAAAATTCTTAAAATACAAAA-AATAA i chlSab2.chr4 C 0 I 1 s colAng1.NW_012115488v1 3337815 84 + 21726897 CTATCCTTAAGCAGAAGAAGTATCTTTATTTTTTAAATTA-TCTTTTATATAT-TTTTAAAAAAATTCTTAAAATACAAAA-AGTAA i colAng1.NW_012115488v1 C 0 I 1 s calJac3.chr2 81058459 81 - 204313951 CTATCCTTAGGAAGAAGAAATGTCtttattttttaaatta-tttttaatatat---tttttGAAAATCCTAAAATACAAAATAGT-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16064512 81 - 71252344 CTATCCTTAGGCAGAAGAAATATCtttatttttaaaatta-ttttttatatat---tttttaaaaatcctaaaatacaaaataat-- i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5397986 74 + 12262279 CCATCCTTAGGCAGAAATAATATCTTTATTTTTAA----A-TTTTTTAAATAT---ATTTTAAAAAATCTAAAATACAAAA---T-- i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4070298 76 + 15889662 CTATCCTTAGGCAGAAGAAATA----TATTTTTAAAATTA-TTTTTTATATAT----TTTAAAAAATCCTAAAATACAAAATAAT-- i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e rheMac8.chr6 81699141 678 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=1330168.000000 s hg38.chr3_KI270784v1_alt 135313 241 + 184404 tttttccagatttgcttcagttttcttttataacaaaatgatagagatacagataggacttacacattccattctttcctcttagagatcaccttttaacgatagcctc---ttaagatggtttgatacattcccattcatgttttcatacattcatacacatatgcatattcctcaaatatatattattgttttgtatgagaaaaatgtttgtaaattgaatatatcctgaaacattgtt-tat s panTro5.chr3 30063 241 - 202621043 tttttccagatttgcttcagttttcttttataacaaaatgatagagatacagataagacttacacattccattctttcctcttagagatcacctcttaaggatagcctc---ttaagatggtttgatacattcccattcatgttttcatatattcatacacatatgcatattcctcaaatatatattattgttttgtatgagaaaaatgtttgtaaattgaatatatcctgaaacattgtt-tat i panTro5.chr3 C 0 C 0 s panPan2.chr3 23492 239 - 205426864 tttttccagatttgcttcagttttcttttataacaaaatgatagagatacagataagacttacacattccattctttcctcttagagatcacctcttaaggatagcctc---ttaagatggtttgatacattcccattcatgttttcatacattcatacacatatgcatattcctcaaatatatattattgttttgtatgagaaaaatgtttgtaaattga--atatcctgaaacattgtt-tat i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 41838 241 + 508821 TTTTTCCAGGTTTGCTTCAGTTTTCTTTTATAACAAAATGACAGAGATACAGATAAGACTTACAcattccattctttcctcttagagatcacctcttaacgatagcctc---ttaagatggtttgatacattcccattcatgttttcatacattcatacacatatgcatattcctcaaatatatattattgttttgtatgagaaaaatgtttgtaaattgaatatatcctgaaacattttt-tat i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44693995 233 + 86207423 TTTTTCCAGGTTTGCTTCAGTTTTCTTTTATAACAAAATGATAGAGATACAGATAAGACTTACACATTCCATTTTTTTCTCTTAGAGATCACCTC--AACTACAGCCTCTTATTAAGATGGTTTGATAcattcccattcatgttttcatacattcatacacatatgcatattcctcaaatatatattactgttttgtatgAGGAAAATGTTTGTAAATTGAATA------GAAATATATAT---- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81699819 245 + 180051392 ttttcccaggtttgctttagttttcttttttaatcaaatgataaagatatagataagatttacacattccattctttcctcttagagatagcctcttagtgatagcctcttattaagatggtgtgatacgttcccatttatgtttttatacattcatacacatatgcatattactcaaatatatattactgttttatatgagaaaaatgtctgtaagttgaatatatcctgaaacattcttttat i rheMac8.chr6 I 678 C 0 s macNem1.NW_012016021v1 17326216 245 - 20287406 ttttcccaggtttgctttagttttcttttttaatcaaatgataaagatatagataagacttacacattccattctttcctcttagagatagcctcttagtgatagcctcttattaagatggtgtgatacattcccatttatgtttttatacattcatacacatatgcatattactcaaatatatattactgttttatatgagaaaaatgtctgtaagttgaatatatcctgaaacattcttttat i macNem1.NW_012016021v1 I 1 C 0 s chlSab2.chr4 78957419 241 + 91010382 TTTTCCCAGGTTTGCTTTAGTTTTCTTTTTTAATCAAATGATAAAGATATAGATAAGACTTACACATTCCA----TTCCTCTTAGAGATAGCCTCTTAGTGATAGCCTCTTATTAAGAtggtgtgatacattcccatttatgtttttatacattcatacacatatgcatattactcaaatatatattactgttttgtatgagaaaaatgtttgtaaattgaatatatcctgaaatattctgttat i chlSab2.chr4 I 1 C 0 s colAng1.NW_012115488v1 3337900 245 + 21726897 TTTTCCCAGGTTTGCTTTAGTTTTCTTTTTTAATCAAAGGATAAAGATATAGATAAGACTTACATATTCCATTCTTTCCTCTTAGAGATAGCCTCTTAGTGATAGCCTCTTATTAAGAtggtgtgatacattcccatttatgtttttatacattcatacacatatgcatattactcaaatatatattactgttttgtatgagaaaaatgtttgtaaattgaatatatcctgaaatattcttttat i colAng1.NW_012115488v1 I 1 C 0 s calJac3.chr2 81058540 235 - 204313951 TTTTCGCAGATTTGCTTTAGTTTTCTTTTTTAACAAAAT------GGTACTGATAAGACTTACACattccattctttcctaat--agataccctcctagagataggcttttattatcatggagtgatacattcccatttatgtttttacacattcatacacatatgcctattccttaaatatatattattgttttatatgaggaaactgtttgtaaatcgaatatgccctgaaacatttttat-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16064593 237 - 71252344 ttttCCTAGGTTTGCTTTAGTTTTCTTTTTTAACAAAAT------GGTACAGATAAGACTTATACATTCCATTCTTTCCTAGTAGAGATAccctcctagcgatagcctcttattatgatggtgtgatacattcccatttatgtttttatacattcatatacgtatgcctattccttaaatatattttattgttttatatgaggaaaatgtttgtaaatttaatatatactgaaacatttttat-- i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5398060 235 + 12262279 ttttcccaggtttgctttagttttcttttttaacaaaat------ggtacagataagacttacacattccattctttcctagt--agataccctcctggcgataacctcttattatcatggtgtgataccttcccatttatgtttttatacattcatatacatatgcctattccttaaatatatattattgttttatatgaggaaagtgtttgtaaattgaatatacactgaaacattttaat-- i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4070374 235 + 15889662 TTTTCCCAGGTTTGCTTTAGTTTTCTTTTTTAACAAAAT------GGTACAGATAAGACTTACACATTCCATTCTTTCCTAGT--AGATACCCTTCTAGTGATAGCCTCTTATTATCATTgtgtgatacattcccatttatgtttttatacattcatatacatatgcctattccttaaatatatattattgttttatatgaggaaaatgtttgtaaactgaatatacactgaaacatttttat-- i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=3307029.000000 s hg38.chr3_KI270784v1_alt 135554 732 + 184404 ctcaacataatgcttatgaaattttatccatcttgtttcatttatttctgttttattcattttaattcctgAGTGAATTTTAAGTATTGACTATAGATAGATCATGACTTTGAGGGATGGCATGCAaatatcagtatctccaagccttttctcttgagtggttcaggcaactacagtgcaatcttctgatctccttctgaggg---taccactgtcactgttccttgtaggaacctagcagtaacaggtgattaataaagtgtctcccattagtatgtagaatttctacccttaacttccctgatttctgtatgttactcagctgtggttgctgtctcAGAGAACTCTTCTTATAGGACATAAGATGTTTTCCAGGATAACAACCACCAGCTGTCTGATTTCAGAGAGGTAGAAGCCTGGCAATATTA----GATTGAGGATGTGTATACAGGATTCCAGTTTCTTAAAACA--TTTTTTTT-------TCCTATTTGCATCACCT-CCCATGGCACTAC----------------tttatttatttatgtatt------atttattttaatttt-taAAAA--AtttattttttttagacaaattcttgttctgtcactgaggctggagtgcagtggtgcgatctctgctcactgcaacctccgcctcccgggttccagcgatcccccacttcagcttcccgagtagctgggaccacaggcacgcaccaccacacctggctaatAGCACTTCTTTATAGAGATTTTTGCCAGG s panTro5.chr3 30304 729 - 202621043 ctcaacataatgcttatgaaattttatccatcttatttcatttatttctgttttattcattttaattcctgaatGAATTTTAAGTATTGACTATAGATAGATCATGACTTTGAGGGACGGCATGCAaatatcagtatctccaagccttttctcttgagtggttcaggcaactacagtgcaatcttctgatctccttctgaggg---taccactgtcactgttccttgtaggaacctagcagtaacaggtgattaataaagtctctcccattagtatgtagaatttctacccttaacttccctgatttctgtatgttactcagctgtggttgctgtctcAGA--ACTCTTCTTATAGGACATAAGATGTTTTCCAGGATAACAACCACCAGCTGTCTGATTTCAGAGAGGTAGAAGCCTGGCAATATTA----GATTGAGGATGTGTATACAGGATTCCAGTTTCTTGAAACA--TTTTTTTT--------CCTATTTGCATCACCT-CCCATGGCACTAC----------------tttatttatgtatgtatt------atttatttTAATTTT-AAAAAA--AtttattttttttagacaaattcttgttctgtcactgaggctggagtgcagtggtgcgatctctgctcactgcaacctccgcctcccgggttccagcgatcccccacttcagcttcccgagtagctgggaccacaggcacgcaccaccacacctggctaatAGCACTTCTTTATAGAGATTTTTGCTAGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 23731 729 - 205426864 ctcaacataatgcttatgaaattttatccatcttatttcatttatttctgttttattcattttaattcctgAATGAATTTTAAGTATTGACTATAGATAGATCATGACTTTGAGGGACGGCATGCAaatatcagtatctccaagccttttctcttgagtggttcaggcaactacagtgcaatcttctgatctccttctgaggg---taccactgtcactgttccttgtaggaacctagcagtaacaggtgattaataaagtctctcccattagtatgtagaatttctacccttaacttccctgatttctgtatgttactcagctgtggttgctgtctcAGC--ACTCTTCTTATAGGACATAAGATGTTTTCCAGGATAACAACCACCAGCTGTCTGATTTCAGAGAGGTAGAAGCCTGGCAATATTA----GATTGAGGATGTGTATACAGGATTCCAGTTTCTTGAAACA--TTTTTTTT--------CCTATTTGCATCACCT-CCCATGGCACTAC----------------tttatttatgtatgtatt------atttattttaatttt-taAAAA--AtttattttttttagacaaattcttgttctgtcactgaggctggagtgcagtggtgcgatctctgctcactgcaacctccgcctcccgggttccagcaatcccccacttcagcttcccgagtagctgggaccacaggcacgcaccaccacacctggctaatAGCACTTCTTTATAGAGATTTTTGCTAGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 42079 730 + 508821 ctcaacataatgcttatgaaattttatccatcttatttcatttatttctgttttattcattttaattcctgaatGAATTTTAAGTATTGACTATAGATAGATCATGACTTTGAGGGATGGCATGCAaatatcagtatctccaagccttttctcttgagtggttcaggctactacagtgcaatcttctgatctccttctgaggg---taccactgtcactgttccttgtaggaacctagcagtaacaggtgattaataaagtctctcccattagtatgtagaatttctacccttaacttccctgatttctgtatgttactcagctgtggttgctgtctcAGAGAACTCTTCTTATAGGACATAAGATGTTTTCCAGGATAACAACCACCAGCTGTCTGATTTCAGAGAGGTAGAAGCCTGGCAATATTA----GATTGAGGATGTGTATACAGGATTCCAGTTTCTTAAAACA--TTTTTTTT---------CTACTTGCATCACCT-CCCATGGCACTAC----------------tttatttatttatgtatt------atttattttaatttt-ttaAAA--AtttattttttttagacaaattcttgttctgtcgccaaggctggagtgcagtggtgcgatctctgctcactgcaacctccacctcccgggttccagcgatcccccacttcagcttcctgagtagctgggaccacaggcacgcaccaccacacctggctaatAGCACTTCTTTATAGAGATTTTTGCTAGG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81700064 748 + 180051392 ctcaacataatgcttataaagttttatccatcttatttcacgtatttctgttttattcattttaactcctgAATGAACTTTAAGTATTCACTATAGATAAATCATCACTTTGAGGGATGGCATGCAaatgtcagtatcaatgaaccttttctcttgaatggttcagtatacttcagtgcaatcttccaatctccttctgagggatataccattgtcgctgttccttttaggaacctagcagtaacaggtgactagtaaagtctctccaattagtatgtagaatttctccccttaacttccctgatttctgtatgtttcttagctgtgcttgctgtcttagagaactcttcttataggacataagatgttttcagggataacaacctccagctgtctggtttcagagaggtagtagcctggcaatatta----gattaagaatgtggatagaggattctagctgctttaaaca--TTTTTTTTTTTT-----CTGTTTGAATCACCTCCCCATGGCACTACtttatttatttatttatttatttatttat---tt------atttatttaattttt-taaAAA--ATTAA---ttttgagacgaattcttgctctttcacccaggctgcagtgcagtggtacaatctctgctcactgcaacctccgcctcctgggttcaagcaatcccccacttcagcttcccgagtagctgggaccacaggcacacaccaccacacctggTGAATGGCACTTCTTTATAGAAATTTTTGCTAGG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17326461 742 - 20287406 ctcaacataatgcttataaagttttatccatcttatttcacgtatttctgttttattcattttaactcctgAATGAACTTTAAGTATTCACTATAGATAGATCATCACTTTGAGGGATGGCATGCAaatgtcagtatcaatgaaccttttctcttgaatggttcagtatacttcagtgcaatcttccaatctccttctgagggatataccattgtcgctgttccttttaggaacctagcagtaacaggtgactagtaaagtctctccaattagtatgtagaatttctccccttaacttccctgatttctgtatgtttcttagctgtgcttgctgtcttagagaactcttcttataggacataagatgttttcagggataacaacctccagctgtctggtttcagagaggtagtagcctggcaatatta----gattaagaatgtggatagaggattctagctgctttaaaca--TTTTTTTTTTTT---TCCTGTTTGAATCACCTCCCCATGGCACTAC--------tttatttatttatttatttat---tt------atttatttaATTTTT-TTAAAA--ATTAA---ttttgagacgaattcttgctctttcacccaggctgcagtgcagtggtacaatctctgctcactgcaacctccgcctcctgggttcaagcaatcccccacttcagcttcccgagtagctgggaccacaggcacacaccaccacacctggTGAATGGCACTTCTTTATAGAAATTTTTGCTAGG i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78957660 736 + 91010382 ctcaacataatgcttataaagttttatccatgttatttcacgtgtttctgttttattcattttaactcctgAATGAACTTTAAGTATTCACTATAGATAGATCATCACTTTGAGGGATGGCATGCAaatgtcagtatcaatgaa-cttttctcttgaatggttcagtctacttcagtgcaatcttccaatctccttctgagggatataccattgtcgctgttccttttaggaacctagcagtaacaggtgactagtaaagtctctccaattagtatgtagactttctccccttaacttccctgatttctgtatgtttcttagctgtgcttgctgtcTTAGAGAACTCTTCTTATAGGACATAAGATGTTTTCAAGGATAACAACCTCCAGCTGTCTGGTTTCA----------------GCAATATTA----GATTAAGAATGTGGATAGAGGATTCTAGCTGCTTTAAACA--tttttttttttttttttctgtttGAATCACCTCCCCATGGCACTACtttatttatttatttatttatttatttat---tt------atttatttaattttt-ttaaAA--ATTAA---ttttgagacaaattcttgctctttcacccaggctgcagtgcagtggtacaatctttgctcactgcaacctccgcctcctgggttcaagcaatcccccacttcagcttcccgagtagctgggaccacaggcacacaccaccacacctggTGAATGGCACTGCTTTATAGAAATTTTTGCTAAG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3338145 733 + 21726897 ctcaacataatgcttataaagttttatccatcttatttcatgtatttctgttttattcattttaactcctgAATGAACTTTAAGTGTTCACTATAGATAGATCATCACTTTGAGGGATGGCATGCAaatgtcagtatcaatgaaccttttctcttgaatggttcagtctactacagtgcaatcttccaatctccttctgagggatataccattgttgctgttccttttaggaacctagcagtaataggtgactagtaaagtctctccagttagtatgtagaatttctccccttaacttccctgatttctgtatgtttcttagctgtgcttgctgtcttagagaactcttcttataggacataagatgttttcgaggataacaacctccagctgtctggtttca--gaggtagtagcctggcgatatta----gattaagaatgtgtatagaggattctggctgctttaaaca--TTTTTTTTTTTT--TTTCTGTTTGAATCACCTCCCCATGGCACTAC----------------tttatttatttat---tt------atttatttaattttt-taAAAA--ATTAA---ttttgataaaaattcttgctttttcacccaggctggagtgcagtggcacaatctctgctcactgcaacctccgcctcctgggttcaagcgatcccctacttcagcttcctgagtaactgcgaccacaggcacatgccaccatacctggTGAATGGCACTTCTTTATAGAAATTTTTGCTAAG i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81058775 681 - 204313951 ctcaacataatgattatgaaatttcatccctcttatttcatgtatttctgtcttactcattttaactcctgAATGAATTTTAAGTATTGACT--------------ACTTGGAGAGATGGCATGCAAATGTCAGTATCTACAAT--------------------------------TGCAAtcttccaatctctttctgagggatataccattgccgctgttccttgtaggaacctagcagtaacaggtgacgagtaaagtctctccagttagtatgcagaattattatccttaaattccttgatttctgtatgttactcagctgtgcttgctgtcTTAGAGAACTCTTCTTATAGGATATAAGATGTTTTTTATCATAACAAACTTCAGCTGTCTGATGTTAGAGAGATAATAGCCAGGTAATATTA----GATTAAGAACATCTATAGAGGATTCTAGTTTCTTTAAACA--TTGTTTTT--------TCTGTTTTCATCACCTCCCCATGACACTAC----------------tttatttatttat-----------tttaatttaaacattaaaaaaa--attt----ttttgagacaatttcttgttctgtcgcccaagctggagtgcaatggtgcaatcttggctcactgcgacctctgcctcctgagttcaaacaatcccccacctcagtttcccgagtggctgagaccacagacatgtgccacaatacctgactaGTGACTCTTCTTCATAGAAATTTTTGCTAGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16064830 683 - 71252344 ctcgacataatgcttataacatttcatccatcttatatcatgtatttctgttttacttattttaactcctgAATGAATTGTAAGTATTGACT--------------ACTTTGAGAGATGGCATGCAAATGTCAGTATCTACAAT--------------------------------TGCAATGttccaatctctttctgagggatataccactgccgctgtt-cttgtaggaacctagcagtaacaggtgatggctaaagtctctccagttagtatgtagaatttttatccttaaattccttgatttctgtatgttactcagctgtgcttgctgtcTTAAAGAACTCTTCTTATAGGACATAAGATATTTTTTAACATAACAACCTTCAGCTGTCTGATTTCAGAGAGGTAATAGCCAGGTAATATTATATTAATTAAGAACATGTATAGAAAAGTCTAGTTTCTTTAAACA--TTTTTTTT--------TCTATTTTTATCACCTCCCCATGGCACTAC----------------tttatttattcat-----------tttaatttaaacatt-ttttaa--attt----ttttgagacaatttcttgttctgtcacccaagttggagtgcagtggtgcaatcttggctcactgcaacctctgcctcctgagttcaagcaatcccctacctcagtttcccgagtagctgagaccacaggcacatgccaccatacctgactaGTGGCACTTCTTCATAGAAATTTTTGCTAGG i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5398295 678 + 12262279 ctcaacataatgcttatgaaatttcatccatcttatttcatgtatttctgttttactcattttaactcctgAATGAATTTTAAGTATTGACT--------------ACTTTGAGAGATGGCATGCAAATGTCAGTATCTACAAT--------------------------------TGCAATCTTCCAATCTCTTTCTGAGGCATATACCATTGTCGCTGTTCCTTGTAGGAACCTAGCAGTAACAGGTGATGAGTAAAGTCTCTCCAGTTTTTTTGTAGAATTTTTATCCTTAAATTCCTTGATTTCTGTATGTTACTCAGCTGTGCCTGCTGTCTTAGAGAACTCTTCTTATAGGATATAAGATGTTTTTTAACATAACAACCTTCAGCTGTCTGATT---------------CCAGGTAATATTA----GATTAAGAACATATATAGAGGATTCTAGTTTCTTTAAATA--TATTTTTT--------TCTATTTTCATCACCTCTCCATGGCACTAC----------------tttatttatttatttatttatttatttatttTAAACATT-AAAAAAtttttt----ttttgagacaatttcttgttctgtcgtccaagctggagtgcagtggtgcaatctctgctcactgcaacctctgcctcctgagttcaagcaatcccccagctcagtttcccgattagctgagaccacaggcacgtgccacaatacttgactaatGGCACTTCTTCATAGAAATTTTTGGTAGG i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4070609 681 + 15889662 ctcaacataatgcttatgaaatttcatcaatcttatttcatgtacttttgttttactcattttaaTGCCTGAATGAATTTTAAATATTGACT--------------ACTTTGAGAGATGGCATGCAAATGTCAGTATCTACAAT--------------------------------TGCAATCTTCCAATCTCCTTCTGAGGGATACACCATTGCTGCTGTTCCTTGTAGGAACCTAGCAATAACAGGTGACGAGTAAAGTATCTCCAGTTAGTATGTAAAATTTTTATCCTTAAATTCCTTGA-TTCTGTATGTTACACAGCTGTGCTTGCTGTCTTAGAGAACTCTTCTTATAGGACATAAGATGTTTTTTAACATAACAACCTTCAGCCGTCTGATTTCAGAGAGGTAATAGCCAGGTAATATTA----GATTAAGAACATGTATAGAGGATTCTAGTTTCTTTAAACAATTTTTTTTT--------TCTATTTTCATCACCTCCCCATGGCACAAC----------------TTTATTTATTTAT-----------TTTAATTTAAACATT-TTTAAA--AAtt----ttttgagacaatttcttgttctgtcgcccaagctggagtgcagtggtgcaatctcggctcactgcaacctctgcctcctgagttcaagcaatcccccacctcagtttcctgagtagctgagaccacaggcacgtgccacaatacctgactaGTGGCACTTCTTCATAGAAATTTTTGCTAGG i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44694228 0 + 86207423 C a score=1872587.000000 s hg38.chr3_KI270784v1_alt 136286 320 + 184404 ATAAATATAATTTTTGAGATATCTGCATTGTAGGCAATCATCTTTTTTAATTTTTCATTCACAAATGTTATTTCCAAAATGTAGCCGTCTCTTACCTACT---AATTTTTCTCCTGTTTTCTTTGTCTGTATGGGTTTGtattttttaa---ttgttgctattatggctattgttg---ttattgtta-tattattcattttctattaGCTAAGTGAAGGTTTTGGGGCAGTATGAAATAAATATGTCAAAGTTACCATATTCTTCTGTTATTATTTTTAATGGAAGATAAT----AAATTTTAATTTTTTCTTCAATGATTTTGATCTGTTCA s panTro5.chr3 31033 320 - 202621043 ATAAATATAATTTTTGAGATATCTGCATTGTAGGCAATCATCTTTTTTAATTTTTCATTCACAAATGTTATTTCCAAAATGTAGCCGTCTCTTACCTACT---AATTTTTCTCCTGTTTTCTTTGTCTGTATGGGTttgtattttttaa---ttgttgctattatggctattgttg---ttattgtta-tattattCATTTTCTATTAGCTAAGTGAAGGTTTTGGGGCAGTATGAAATAAATATGTCAAAGTTACCATATTCTTCTGTTATTATTTTTAATGGAAGATAAT----AAATTTTAATTTTTTCTTCAATGATTTTGATCTGTTCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 24460 319 - 205426864 ATAAATATAATTTTTGAGATATCTGCATTGTAGGCAATCAACTTTTTAAATTTTTCATTCACAAATGTTATTTCCAAAATGTAGCCGTCTCTTACCTACT---AATTTTTCTCCTGTTTTCTTTGTCTGTATGGGTttgtattttttaa---ttgttgctattatggctattgttg---ttattgtta-tattattCATTTTCTATTAGCTAAGTGAAGGTTTTGGGGCAGTATGAAATAAATATGTCAAAGTTACCATATTCTTCTGTTATTATTTTTAATGGAAGATAAT----AAATTTTAA-TTTTTCTTCAATGATTTTGATCTGTTCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 42809 319 + 508821 ATAAATATAATTTTTGAGCTATCTGCATTGTAGGCAATCATCTTTTTTAATTTTTCATTCACAAATGTTATTTCCAAAATGTAGCCATCTCTTACCTACT---AATTTTTCTCCTGTTTTCTTTGTCTGTATGGGTTTGtattttttaa---ttgttgctattatgactattgttg---ttattgttattattattcattttctattaGCTAAGTGAAGGTTTTGGGGCAGTATGAAATAAATATGTCAAAGTTACCATATTCTTCTGCTATTA-TTTTAATGGAAGATAAT----AAATTTTAA-TTTTTCTTCAATGATTTTGATCTGTTCA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44694228 315 + 86207423 ATAAATATAATTTTTAAGATATCTGCATTGTAGGCAATCATCTTTTCTAATTTTTCATTCACAAATGTTATTTCCAAAATGTAGCCGTCTCTTACCTACTCCGAATTTTTCTCCTGTTTTCTGTGTTTCTATGGGTTTGtatttttaaa---ttgttgccattatgactattgtta---t---------tattattcattttctattaGCTAAGTGAAGGTTTTGGGGCAGTATGAAATAAATATGTCAAAGTTACCACATTTTTCTGTTATTATTTTTAATGGAAGATAAT----AAATTTTAATTTTTTCTTCAATGATTTTGATCTGTTCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81700812 334 + 180051392 ATAAATGGAATTTTTGAGATATCTGCATTACAGGCAATCATCTTTCCTAATTTTTCATTCATGAATGTTAGTTCCAAAATGTAGCCATCTTTTACCTACTACTAATTTTTCTCCTGTTTTCTCTGTGTGTATGGGTTTGtatttttaaattgttgttgctattatgattatttttgatattattgttattattattCCTTTTCTATCAGCTAAGTGAAGGTTTGGGGGCAGTATGAAATAAATATGTCAGAGTTACCACATTCTTCTGTTATTATTTTTAATAGAAAATAATAAAGAAATTTTAATTTTTTCTTCAATGATTTTGATCTGTTCA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17327203 334 - 20287406 ATAAATGGAATTTTTGAGATATCTGCATTACAGGCAATCATCTTTCCTAATTTTTCATTCATGAATGTTAGTTCCAAAATGTAGCCATCTTTTACCTACTACTAATTTTTCTCCTGTTTTCTCTGTGTGTATGGGTTTGtatttttaaattgttgttgctattatgattatttttgatattattgttattattattCCTTTTCTATCAGCTAAGTGAAGGTTTGGGGGCAGTATGAAATAAATATGTCAGAGTTACCACATTCTTCTGTTATTATTTTTAATAGAAAATAATAAAGAAATTTTAATTTTTTCTTCAATGATTTTGATCTGTTCA i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78958396 334 + 91010382 ATAAATGGAATTTTTGAGATATCTGCATTACAGGCAATCATCTTTCCTAATTTTTCATTCATGAATGTTAGTTCCAAAATGTAGCCATCTTTTACCTACTACTAATTTTTCTTCTGTTTTCTCTGTGTGTATGGGTTTGtatttttaaattgttgttgctattatgattatttttgatattattgttattattattCCTTTTCTATCAGCTAAGTGAAGGTGTGGGGGCAGTATGAAATAAATATGTCAGAGTTACCACATTCTTCTGTTATTATTTTTAATAGAAAATAATAAAGAAATTTTAATTTTTTCTTCAATGATTTTGATCTGTTCA i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3338878 334 + 21726897 ATAAATGGAATTTTTGAGATATCTGCTTTGCAGGCAATCATCTTTCCTAATTTTTCATTCACGAATATTAGTTCCAAAATGTAGCCATCTTTTACCTACTACTAATTTTTCTCCTGTTTTCTCTGTGTGTATGGGTTTGtatttttaaattgttgttgctattattattatttttgatattattgttattattattCCTTTTCTATCAGCTAAGTGAAGGTTTGGGGACAGTATGAAATAAATATGTCAAAGTTACCACATTCTTCTCTTATTATTTTTAATAGAAAATAATAAAGAAATTTTAATTTTTTCTTCAATGATTTTGATCTGTTCA i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81059456 330 - 204313951 ATAAATAGAATTTTTGAGATAACTGCATTGTAGGCAATCATCTTTCCTAATTTTTCATTTGCAGATGTTAGTTCCAAAATGTAGCCATCTCTTAACTGCTAGTAATTTTTT-CCTGTTTTCTCTGCTTGTATGGGTTTGCATTTTTAAattattgttggtattatgattattgttgataccgttgttattattactCATTCTCTATTGGCTAAGTGAAGGTTTTAGGGCAGCATGGAATAAATATGTCAAAGTTACCACATTTTTCTG---TTATTTTTAATAGAAGATAATAAAGAAATTTTAATTTTTTCTTCAATGATTTTGATCTGTTCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16065513 330 - 71252344 CTACATAGAATTTTTGAGATATCTGCATTCTAGGCAATCGTCTTTCCTAATTTTTCACTCATAGATGTTAGTTCCAAAATGTAGCCATCTCTTCACTACTACTAATTTTTC-TCCATTTTCTCTGCTTGGATAGGTTCGTATTTTTAAattattattgctattatgattattgttgaaactgttgttattattattCATTCTCTATTGGCTAAGTGAAGGTTTTAGGGCAGCATGAAATAAATATATCAAAGTTACCACATTTTTCTGTTATTATTTTTAATAGAAG---ATAAAAACATTTTAATTTTTTCTTCAATGATTTTGATCTATTCA i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5398973 333 + 12262279 ATAAACAGAATTTTTGAGATATCTGCATTCTAGGAAATCATCTTCCCTAAATTTTCATTCGCAGATGTTAGTTCCAAAATGTAGCCATCTCTTAACTACTGCTAATTTTTCTCCTGTTTTCTCTGTTTGTATGGGTTTGtatttttaaattattgttgctattatgattattgttgatactgttgttattactactcattttctattGGCTAAGTGAAGGTTTTAGGGCAGCATGAAATAAATATGTCAAAGTTACCACATTTTTCTGTTATTATTTTTAATAGAGA-TAATGAAGAAATTTTAATTTTTTCCTCAGCGATTTTGATCTGTTCA i cebCap1.NW_016107331v1 C 0 I 38218 s aotNan1.NW_018506370v1 4071290 329 + 15889662 ATAAATAGAATTTTTGAGATATCTGCATTTTAGGCAATCATCTTTCCTAATTTTTCATTCGCAGATGTTAGTTCCAAATTATAGCCATCTCTTAACTACTACTAATTTTTC-TCCATTTTCTCTGC-TGTGTGGGTTTGtatttttaaattattgttgctattatgattattgttgatactgttattattattactcattttctattGGCTAAGTGAAGACTTTAGGGCAGCATGAAATGAATATGTCAAAGTTACCACATTTTTCTGTTACGATTTTTAATAGAAG---ATAAAGAAATGTTAATTTTTTCTTCACTGATTTTAATCTGTTCA i aotNan1.NW_018506370v1 C 0 I 45620 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=17161.000000 s hg38.chr3_KI270784v1_alt 136606 5 + 184404 GTATT s panTro5.chr3 31353 5 - 202621043 GTATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 24779 5 - 205426864 GTATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 43128 5 + 508821 GTATT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44694543 5 + 86207423 GTTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81701146 5 + 180051392 GTTTT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17327537 5 - 20287406 GTTTT i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78958730 5 + 91010382 GTTTT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3339212 5 + 21726897 GTTTT i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81059786 5 - 204313951 ATTTT i calJac3.chr2 C 0 I 42618 s saiBol1.JH378106 16065843 5 - 71252344 ATTTT i saiBol1.JH378106 C 0 C 0 e aotNan1.NW_018506370v1 4071619 45620 + 15889662 I e cebCap1.NW_016107331v1 5399306 38218 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=8190.000000 s hg38.chr3_KI270784v1_alt 136611 2 + 184404 TT s panTro5.chr3 31358 2 - 202621043 TT i panTro5.chr3 C 0 C 0 s panPan2.chr3 24784 2 - 205426864 TT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 43133 2 + 508821 TT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44694548 2 + 86207423 TT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81701151 2 + 180051392 TT i rheMac8.chr6 C 0 I 38833 s macNem1.NW_012016021v1 17327542 2 - 20287406 TT i macNem1.NW_012016021v1 C 0 I 39689 s chlSab2.chr4 78958735 2 + 91010382 TT i chlSab2.chr4 C 0 I 39342 s colAng1.NW_012115488v1 3339217 2 + 21726897 TT i colAng1.NW_012115488v1 C 0 I 47162 s saiBol1.JH378106 16065848 2 - 71252344 TT i saiBol1.JH378106 C 0 I 38796 e aotNan1.NW_018506370v1 4071619 45620 + 15889662 I e cebCap1.NW_016107331v1 5399306 38218 + 12262279 I e calJac3.chr2 81059791 42618 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=5500.000000 s hg38.chr3_KI270784v1_alt 136613 1 + 184404 C s panTro5.chr3 31360 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chr3 24786 1 - 205426864 C i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 43135 1 + 508821 C i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44694550 1 + 86207423 C i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81739986 1 + 180051392 c i rheMac8.chr6 I 38833 C 0 s macNem1.NW_012016021v1 17367233 1 - 20287406 c i macNem1.NW_012016021v1 I 39689 C 0 s chlSab2.chr4 78998079 1 + 91010382 c i chlSab2.chr4 I 39342 C 0 s colAng1.NW_012115488v1 3386381 1 + 21726897 c i colAng1.NW_012115488v1 I 47162 C 0 s saiBol1.JH378106 16104646 1 - 71252344 c i saiBol1.JH378106 I 38796 C 0 s cebCap1.NW_016107331v1 5437524 1 + 12262279 c i cebCap1.NW_016107331v1 I 38218 C 0 e aotNan1.NW_018506370v1 4071619 45620 + 15889662 I e calJac3.chr2 81059791 42618 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=6006.000000 s hg38.chr3_KI270784v1_alt 136614 1 + 184404 T s panTro5.chr3 31361 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 24787 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 43136 1 + 508821 T i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44694551 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81739987 1 + 180051392 t i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17367234 1 - 20287406 t i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78998080 1 + 91010382 t i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3386382 1 + 21726897 t i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81102409 1 - 204313951 T i calJac3.chr2 I 42618 C 0 s saiBol1.JH378106 16104647 1 - 71252344 t i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5437525 1 + 12262279 t i cebCap1.NW_016107331v1 C 0 C 0 e aotNan1.NW_018506370v1 4071619 45620 + 15889662 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=225872.000000 s hg38.chr3_KI270784v1_alt 136615 39 + 184404 AATCACTTTACATAAATTTATAGGTTTGCTAC-TTAACAT s panTro5.chr3 31362 39 - 202621043 AATCACTTTACATAAATTTATAGGTTTGCTAC-TTAACAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 24788 39 - 205426864 AATCACTTTACATAAATTTATAGGTTTGCTAC-TTAACAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 43137 39 + 508821 AATCACTTTACATAAATTTATAGGTTTGCTAC-TTAACAT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44694552 35 + 86207423 AAGCACTTTACATAAATTTATAGGT----TAC-TTAACAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81739988 39 + 180051392 aataactttacataaatttatagatttgatac-ttaacat i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17367235 39 - 20287406 aataactttacataaatttatagatttgatac-ttaacat i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78998081 39 + 91010382 aataactttacataaatttatagatttgatac-ttaacat i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3386383 39 + 21726897 aataactttacataaatttatagatttgatac-ttaacat i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81102410 39 - 204313951 AATCACTTTACATAAACTTGTAGATTTGATAT-TTAACAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16104648 39 - 71252344 aatcactttacataaacgtgtagatttgatat-ttaacat i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5437526 39 + 12262279 aatcactttacataaacttgtagatttgatat-ttaacat i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4117239 40 + 15889662 AATCACTTTACATAAACTTGTAGATTTGATATATTATCAT i aotNan1.NW_018506370v1 I 45620 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=583742.000000 s hg38.chr3_KI270784v1_alt 136654 115 + 184404 ACTTTATTATTTTGTCCATTTTGGGTGGGGATTGGGA--atgaggagattgaaa-tacaaagaaattcaaagccttgactagggtcctgttggcaatgggatcaggagttcgaacaaa s panTro5.chr3 31401 115 - 202621043 ACTTTATTATTTTGTCCATTTTGGGTGGGGGTTGGGA--atgaggagattgaag-tacaaagaaattcaaagccttgactagggtcctgttggcaatgggatcaggagttcgaacaaa i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 43176 115 + 508821 ACTTTATTATTTTGTCCATTTTGGGTGGGGGTTGGGA--atgaggagattgaag-tacaaagaaattcaacgccttgactagggtcctgttggcaatgggatcaagagttcgaacaaa i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44694587 115 + 86207423 TCTTTATTATTTTGTCCATTTTGGGTGGGGGTTGGGA--atgaggagattgaag-tagaaagaaatccaatgccttgactagggtcctgttggcaatgggagcaggagttggaacaaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81740027 115 + 180051392 actttataattttgtccattttgggtgggggttggga--gtaaggagattgaaa-tacaaagagattcaatgccttgactagggttctgttagcaatgggatcaagagttcaaaccaa i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17367274 115 - 20287406 actttataattttgtccattttgggtgggggttggga--gtaaggagattgaaa-tacaaaaagattcaatgccttgactagggttctgttagcaatgggatcaggagttcaaaccaa i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78998120 115 + 91010382 acattagaattttgtccattttgggtgggggttggga--gtaaggagattgaaa-tacaaagagattcaatgccttgaccaaggttctgttagcaatgggatcaggagttcaaaccaa i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3386422 115 + 21726897 actttataatttcgtccattttgggtgggggttggga--gtaaggagattgaaa-tacaaagagattcaatgccttgactagggttctgttagcaatgggatcaggagttcaaaccaa i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81102449 116 - 204313951 ACTTTATTATTTTGTCCATTTT-GGTAGAGGTTGTGAATGtgaggagattgaaa-tacaaagaaattcaatgcgttgactagggtccttttggcaatgggatcaggagttcaaacaaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16104687 117 - 71252344 actttattattttgtccattttgggtagaggttgtgaatgtgaggagattgaaa-tacaaagaaattcaatgccttgactagtgtcctgttggcaatgggatcaagggttcaaacaaa i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5437565 117 + 12262279 actttattattttgtccattttgggtagaggtggtgaatgtgaggagattgaaa-tacgaagaaattcagtgccttgactagggtcctgttggcagtgggatcaggagttcaaacaaa i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4117279 118 + 15889662 ACTTTATTATTTTGTCCATTTTGGGTAGAGATTGTGAATGTGCGGAGATTGAAATTACAAAGAAATTCAATGCCTTGACTAGGGTCCTTTTGGCAATGGGATCAGGAGTTCAAAAAAA i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e panPan2.chr3 24827 0 - 205426864 C a score=3857870.000000 s hg38.chr3_KI270784v1_alt 136769 664 + 184404 acaatct-cctccagagcccatgtgctcaaccactTACTTCCCTCCCTCCCTTGTTGCTACTGAGAGAATAACTCCTACTGAGAAAGTGTCTTATGACACTTTTAAGACTAACTTTTAAGAAAATTTCGGAAGAAATTCTTGAATTTAGTAAAATATTGTACAAGATAGACTTACAGCTACTTTTAAAGTTCTAAGTTGTAAGACTTTGTAAACACTTGCTTTTATGCACTACAGAGAAAGAGCCCATTCCAGTTCCTCCTCTCTGCTTTTCAAACTCTCTGTTTTTTGCTCACTTTTCTCCAAATTACTGTAAATCCTCTCCCTGGCAAGATGCAGTTTCTCACTCTACACTATCACACACACATTAGCCTGGTGGTTACTTCTTACCTTGCTATAATCCCAGTGAACTAGAATTTTGATCTGATGTGATATGAA-----------------------AGAAATGAGGAAGAAAAGAAAAAT--TTTAAAAAGCACATCATTATTTTTGGATA-TACATCTGTCTGTTGCCAACTTAGAATTATGAAATATAATGAACATGTAAAGGTCTTGACTTGTATTTCTCAATTTATTCTTAAACGTCTTTATTCATCTTCTGTAATTGCAGTCCTTGATAACC-TGAGCGGCAAAAATGAAGAGAATGCAAACAGAAGGGCTGAGAG--AAAAAACC s panTro5.chr3 31516 665 - 202621043 acaatct-cctccagagcccatgtgctcaaccactTACTTCCCTCCCTCCCTTGTTGCTACTGAGAGAATAACTCCTACTGAGAAAGTGTCTTATGACACTTTTAAGAATAACTTTTAAGAAAATTTCGGAAGAAATTCTTGAATTTAGTAAAATATTGTACAAGATAGACTTACAGCTACTTTTAAAGTTCTAAGTTGTAAGACTTTGTAAACACTTGCTTTTATGCACTACAGAGAAAGAGCCCATTCCAGTTCCTCCTCTCTGCTTTTCAAACTCTCTGTTTTTTGCTCACTTTTCTCCTAATTACTGTAAATCCTCTCCCTGGCAAGATGCAGTTTCTCACTCTACACTATCACACACACATTAGCCTGGTGGTTACTTCTTACCTTGCTATAATCCCAGTGAACTAGAATTTTGATCTGATGTGATATGAA-----------------------AGAAATGAGGAAGAAAAGAAAAAT--TTTAAAAAGCACATCATTATTTTTGGATACTACATCTGTCTGTTGCCAACTTAGAATTATGAAATATAACGAACATGTAAAGGTCTTGACTTGTATTTCTCAATTTATTCTTAAACTTCTTTATTCATCTTCTGTAATTGCAGTCCTTGATAACC-TGAGCAGCAAAAATGAAGAGAATTCAAACAGAAGGGCTGAGAG--AAAAAACC i panTro5.chr3 C 0 C 0 s panPan2.chr3 24827 662 - 205426864 ACAATCT-CCTCCAGAGCCCATGTGCTCAACCACTTACTTCCCTCCCTCCCTTGTTGCTACTGAGAGAATAACTCCTACTGAGAAAGTGTCTTATGACACTTTTAAGACTAACTTTTCAGAAAATTTCGGAAGAAATTCTTGAATTTAGT-AAATATTGTACAAGATAGACTTACAGCTACTTTTAAAGTTCTAAGTTGTAAGACTTTGTAAACACTTGCTTTTATGCACTACAGAGAAAGAGCCCATTCCAGTTCCTCCTCTCTGCTTTTCAAA--CTCTGTTTTTTGCTCACTTTTCTCCTAATTACTGTAAATCCTCTCCCTGGCAAGATGCAGTTTCTCACTCTACACTATCACACACACATTAGCCTGGTGGTTACTTCTTACCTTGCTATAATCCCAGTGAACTAGAATGTTGATCTGATGTGATATGAA-----------------------AGAAATGAGGAAGAAAAGAAAAAT--TTTAAAAAGCACATCATTATTTTTGGATACTACATCTGTCTGTTGCCAACTTAGAATTATGAAATATAATGAACATGTAAAGGTCTTGACTTGTATTTCTCAATTTATTCTTAAACTTCTTTATTCATCTTCTGTAACTGCAGTCCTTGATAACC-TGAGCAGCAAAAATGAAGAGAATTCAAACAGAAGGGCTGAGAG--AAAAAACC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 43291 666 + 508821 acaatct-cctccagagcccatgtgctcaaccactTACTTCCCTCCCTCCCTTGTTGCTACTGAGAGAATAACTCCTACTGAGAAAGTGTCTTATGACACTTTTAAGACTAACTTTTAAGAAAATTTCGGAAGAAATTCTTGAATTTAGTAAAATATTGTACAAGATAGACTTACAGCTACTTTTAAAGTTCTAAGTTGTAAGACTTTGTAAACACTTGCTTTTATGCACTACAGAGAAAGAGCTCATTCCATTTCCTCCTCTCTGCTTTGCAAACTCTCTATTTTTTGCTCACTTTTCTCCTAATTACTGTAAATCCTCTCCCTGGCAAGATGCAGTTTCTCACTCTACACTATCACACACACATTAGCCTGGTGGTTACTTCTTACCTTGATATAATCCCAGTGAACTAGAATTTTGATCTGATGTGATATGAA-----------------------AGAAATGAGGAAGAAAAGAAAAAT--TTTAAAAAGCCCATCATTATTTTTGGATACTACATCTGTCTGTTGCCAACTTAGAATTATGAAATATAATGAACATGTAAAGGTCTTGACTTGTATTTCTCAATTTATTCTTAGACTTCTTTATTCATCTTCTGTAATTGCAGTCCTTGATAACC-TGAGCAGCAAAAATGAAGAGAATGCAAACAGAAGGGCTGAGAG-AAAAAAACC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44694702 662 + 86207423 accatct-cctccagagcccatgtgcccaaccgctTACTTCCCTCCCTCCCTGGCTGCTACTAAGAGAATAACTCCTACTGAG-----TTATTAAGTTATTAAGAAGACTAACTTCTAAGAAAATTTCGGAAGAAATTCTTGAATTTAATAAAATATTGTACAAGACAGACTTACAGCTACTTTTAAAGTTCTAGGTTGTAAGACTTTGGAAACACTTGCTTTTATGCACGACAGAGAAAGAGCCCATTCCAGTTCCTCCTCTCTGCTTTGCAAACTCTCTGTTTTTTGCTCACTTTTCTCCTAATTACTGTAAATCCTCTCCTTGGCAAGATGCAGTTTCTCACTCTACACTATCACACACACATTAGCCTGGTGGTTACTTCTTACCTTGCTATAATCCCAGTTAACTAGAATTTTGATCTGATGTGATATGAA-----------------------AGAAATGAGGAAGAAAAGAAAAAT--TTTAAAAAGCACATCATTATTTTTGGATACTACATCTGTCTGTTGCCAACTTAGAATTATGAAATATAATGAACATGTAAAGGTCTTGACTTGTATTTCTCAATTTATTCTTAAACTTCTTTATTCATCTTCTCTAATTGCAGTCCTTGATAACCTTGAGCAGCAAAAAAGAAGAGAATGCAAACAGAAGGGCTGAGAG-AAAAAAACC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81740142 688 + 180051392 ataatctgcctccagaacccatgtgctcaatcactTATTTCCCTCTCTCACATATTGCTACTGAGAGAATAACTCCTACTGAGAAAGGGTCTTATGACGCTTTTAAGACTAACCTTTAAGAAAATTTCAGAAGAAATTCTTGAATTTAGTAAAATATTGTACAAGATAGACTTAAAGCTACCTTTAAAGTTTTAAGTTATAAGACTTTGGAAATACTTGCCTTTGTGCACTACAGAAAAAGAGCCCATTCCAGTTCCTCCTCTCTGCTTTGCAAACTCTCTGTTTTTTGCTCACTTTTCACCTAATTACTGCAAATCTTCTCCCTAGC-AGATGCAGTTTCTCACTCTACACTATCACACGTACATTAGCCTGATGCTTACTTCTTACCTTGCTATAATCTCAGTGAATTAGAATTTTGATCTGATGTGCTATGAAAGGAACAGACAGATAGAAAAGGGAGAAATTAGGAAGAAAAGAAAAA---TTTAAAAAGCACACCTTTATTTTTGGATACTACATCTGCCTGTAGCCAACTTAGAATTATGAAATATAATGAACACGTAAAGGTCTTGACTTGTATTTCTCAATTTATTTTTAAACTTCTTTACTCAT-TTCTCTCATTGCAGTCCTTGATAACCTTGAGTAGCAAAAATGAGGAGAATGCAAACAGAA-GGCTAAGAGAAAAGAAACC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17367389 688 - 20287406 ataatctgcctccagaacccatgtgctcaatcactTATTTCCCTCCCTCACATATTGCTACTGAGAGAATAACTCCTACTGAGAAAGGGTCTTATGACGCTTTTAAGACTAACCTTTAAGAAAATTTCAGAAGAAATTCTTGAATTTAGTAAAATATTGTACAAGATAGACTTAAAGCTACCTTTAAAGTTTTAAGTTATAAGACTTTGGAAATACTTGCCTTTGTGCACTACAGAAAAAGAGCCCATTCCAGTTCCTCCTCTCTGCTTTGCAAACTCTCTGTTTTTTGCTCACTTTTCACCTAATTACTGCAAATCTTCTCCCTGGC-AGATGCAGTTTCTCACTCTACACTATCACACGTACATTAGCCTGATGCTTACTTCTTACCTTGCTATAATCTCAGTGAATTAGAATTTTGATCTGATGTGCTATGAAAGGAACAGACAGATAGAAAAGGGAGACATTAGGAAGAAAAGAAAAA---TTTAAAAAGCACACCTTTATTTTTGGATACTACATCTGCCTGTAGCCAACTTAGAATTATGAAATATAATGAACACGTAAAGGTCTTGACTTGTATTTCTCAATTTATTTTTAAACTTCTTTACTCAT-TTCTCTCATTGCAGTCCTTGATAACCTTGAGTAGCAAAAATGAGGAGAATGCAAACAGAA-GGCTAGGAGAAAAGAAACC i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78998235 688 + 91010382 ataatctgcctccagaacccatgtgctcaatcactTATTTCCCTCTCTCACATATTGCTACTGAGAGAATAACTCCTACTGACAAAGGGTCTTATGACGCTTTTAAGACTAACCTTTAAGAAAATTTCAGAAGAAATTCTTGAATTTAGTAAAATATTGTACAAGATAGGCTTGAAGCTACCTTTAAAGTTTTAAGTTATAAGACTTTGGAAATACGTGCCTTTATGAACTACAGAGAAAGAGCCCATTCCAGTTCCTCTTCTCTGCTTTGCAAACTCTCTGTTTTTTGCTCACTTTTCACCTAATTACTGCAAATCTTCTCCCTGGC-AGATGCGGCTTCTCACTCTACACTATCACACGTACATTAGCCTGATGCTTACTTTTTACCTTGCTATAATCCCAGTGAATTAGAATTTTGGTCTGATGTGCTATGAAAGGAACAGACAGATAGAAAAGGGAGAAATGAGGAAGAAAAGAAAAA---TTTAAAAAGCACATCTTTATTTTTGGATACTACATCTGCCTGTAGCCAACTTAGAATTATAAAATATAATGAACACGTAAAGGTCTTGACTTGTATTTCTCAATTTATTTTTAAACTTCTTTATTCAT-TTCTCTCATTGCAGTCCTTGATAACCTTGAGTAGCAAAAATGAGGAGAATGCAAACAGAA-GGCTAAGAGAAAAGAAACC i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3386537 687 + 21726897 ataatctgcctccagaacccatgtgctcaatcactTATTTCCCTCTCTCACATATTGCTACTGAGAGAATAACTCCTACTGAGAAAGGGTCTTATGACGCTTTTAAGACTAACCTTTAAGAAAATTTCAGAAGAAATTCTTGAATTTAGTAAAATATTGTACAAGATAGACTTAAAGCTACCTTTAAAGTTTTGAGTTATAAGACTTTGGAAATACTTGCCTTTACGCACTACAGAGAAAGAGCCCATTCCAGTTCCTCCTCTCTGCTTTGCAAACTC-CTGTTTCTTGCTCACTTTTCACCTAATTAGTGCAAATCCTCTCCCTGGC-AGATGCAGTTTCTCACTCTACACTATCACATGTACATTAGCCTGATGCTTACTTCTTACCTTGCTATAATCCCAGTGAATTAGAATTTCGATCTGATGTGCTATGAAAGGAACAGACAGATAGAAAAGGGAGAAATGAGGAAGAAAAGAAAAA---TTAAAAAAGCACATCTTTGTTTTTGGATACTACATCTGCCTGTTGCCAACTTAGAATTATGAAATATAATGAATACGTAAAGGTCTTGACTTGTATTTCTCAATTTATTTTTAAACTTCTTTATTCAT-TTCTCTCATTGCAGTCCTTGGTAACCTTGAGTAGCAAAAATGAGGAGAATGCAAACAGAA-GGCTAAGAGAAAAGAAACC i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81102565 655 - 204313951 accatctgtctccacagcccatgtgctcaa-----------ccTGCCTCCCTT-TTGCTACTGAGAGAACAACTCCTACTGAGAAAGTGTCATATGACATTTTTAAGGCTAACTTGTAAGAAAATTTCAGAAGAAATTCTT-------GTAAAATATTGCACAAGATAGACTTAAAGCTACTTTTAAAGTTCTATGTTGTTAGACTTTGGAAACACTTGCCTTTATGCACTACAGAAAAAGAGCCCACTCAGGTTCCTCCTCTCTGCTTTGCAAA----CTGTTTTTTGTTCACTTTTCTCCTAATTACTGCAAATCCTCTCCCTGGC-AGATGCAGTTTCTCACTCTACATTATCGCATATACATTAACCTCGTGCTTACTTCTTACATTGCTGTAATCCCAGTAAATTAGAATTTTGATCTGACGTGCTATGAAAGGAGCAGACAGA------------AAATGAGGAAGAAAAGATAAAT-TAAAAAAAAGCACATCATTATTTTGGGGTACAACATCTGCCTATTGCCAACTTAGAATTACAAAGTAGAATGAACATGTAAAGGTCTTGACTTGTATTTCTCAAATTATTCTTAAATTTCTTTACTCATTTTCTCTAGTTGCCGTCCTTGATAATCTTGAGCAGCAAAAATGAGAAGAATGCAAACAGAAGGGCTAAATG-GAAAAAGC- i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16104804 669 - 71252344 accatctgtctccacagcccatgtgctcaa-----------ccTGCCTCCCTTGTTGCTACTGAGAGAATAACTCCTACTGAGAAAGTGTCATATGACATTTTTAAGGCTAACTTGTAAGAAAATTTCAGAAGAAATTCTTG---TTAGTAAAATATTGCACAAGATAGACTTAAAGCTACTTGTAAAGTTCTATGTTGTAAGACATTGGAAACACTTGCCTTTATGCACTACAGAAAAAGAGCCCACTCAGGTTCCTCTTCTCTGCTTTGCAAA--CTCTGTTTTTTGTTCACTTTTCTCCTAA-TACTACACATCCTCTCCCTGGC-AGATGCAGTTTCTCACTCTACATTATCACATGTACATTAGCCTAATGCTTAGTTCTTACCTTGCTGTAATCCCAGTAAATTAGAATTTTGATCTGACGTGCTATGAAAGGAGCAGACAGA----AAAGGAAGAAATGAGACAGAAAAGAGAAAT-TTTAAAAAAGCACATCATTATTTTGGGGTACTACATCTGCCTATTGCCAACTTAGAATTATGAAATAGAATGAACATGTAAGGGCCTTGACTTGTATTTCTCAAATTATTCTTAAACTTCTTTACTCATTTTCTCTAATTGCAGTCCTTGATAATCTTGAGCAGCAAAAATGAGAAGAATGCAAACAGAAGGGCTAAAAG-GAAAAAGC- i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5437682 671 + 12262279 accatctgtctccacagcccatgtgctcaa-----------ccGGCCTCCCTTGTTGCTGCTGAGAGAATAATTTGTACTGAGAAAGTGTCATATGACATTTTTAAGGCTAACTTGTAAGAAAATTTCAGAAGAAATTCTTG---TTATTAAAATATTGCACAAGATAGACTTAAAGCTACTTTTAAAGTTCTATGTTGTAAGACTTTGGAAACACTTGCCTTCATGCACTACAGAAAAAGAGCCCACTCAGGTTCCTCCTCTCTGCTTTGCAAA--CTCTGTTTTTTGTTCACTTTTCTCCTAATTACTGCAAATCCTCTCCCTGGC-GGATGCAGTTTCTCACTCTACATTATCGCATGTACATTAGCCTAGTGCTTACTTCTTGCCTTGCTGTAATCCCAGTAAATTAGAATTTTGATCTGACGTGCTACAAAAGGATCACACaga----aaagggagaaatgaggaagaaaagagaaataaaaaaaaaAGCACATCATTATTTTGCGGTACTACATCTGCCTATTGCCAACTTAGAATTATGAAATAGAATGAACATGTAAAGTTCTTGACTTGTATTTCCCAAATTATTCTTAAACTTCTTTACTGATTTTCTCTAATTGCAGTCCTTGATAATCTTGAGCTGCAAAAATGAGTAGAATGCAAACAGAAGGGCTAAAAG-GAAAAAGC- i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4117397 671 + 15889662 ACCATCTGTCTCCACAACCCATGTGCTCAG-----------CCTGCCTCCCTTGTTGCTACTGAGAGAATAACTCCTACTGAGAAAGCATCATAGGACATTTTTAAGGCTAACTTGTAAGAAAATTTCAGAAGAAATTCTTA---TTAGTAAAATATTGCACAATATAGACTTAAAGCTACTTTTAAAGTTCTGTGTTGTAAGACTTTGGAAACACTTGCCTTTATGCACTACAGAAAAAGAGCCCCCTCAGGTTCCTCCTCTCTGCTTTGCAAA--CTCTATTTTTTGTTCAATTTTCTCCTAATTACTGCAAATCCTCTCCCTGGC-AGATGCAGTTTCTCACTTTACGTTATCGCATGTACATTAGCCTAGTGCTTACTTCTTACCTTGCTGTAATCCCAGTAAATTAGAATTTTGATCTGATGTGCTATgaaaggagcagacaga----aaagggagaaatgaggaagaaaagagaaataaaaaaaaaAACATATCATTATTTTGGGGTACTACATCTGCCTATTGCCAACTTAGGATTATGAAATAGAATGAACATGTAAAGGTCTTGACTTGTATTTCTCAAATTATTCCTAAACTTCTTTATTCATTTTCTCTAATTGCAGTCCTTGATAATCTTGAGCAGCAAAAATGAGAAGAATGCAAACAGAAGGGCTAAAAG-GAAAAAGC- i aotNan1.NW_018506370v1 C 0 I 9 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=23519.000000 s hg38.chr3_KI270784v1_alt 137433 9 + 184404 TCTTCTAAC-- s panTro5.chr3 32181 9 - 202621043 TCTTCTAAC-- i panTro5.chr3 C 0 C 0 s panPan2.chr3 25489 9 - 205426864 TCTTCTAAC-- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 43957 9 + 508821 TCTTCTAAC-- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44695364 9 + 86207423 TCTTCTAAC-- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81740830 9 + 180051392 TCTTCTAAC-- i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17368077 9 - 20287406 TCTTCTAAC-- i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78998923 9 + 91010382 TCTTCTAAC-- i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3387224 9 + 21726897 CCTTCTAAC-- i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81103220 9 - 204313951 --ATCTTACTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16105473 9 - 71252344 --GTCTTACCT i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5438353 9 + 12262279 --ATCTCACCT i cebCap1.NW_016107331v1 C 0 C 0 e aotNan1.NW_018506370v1 4118068 9 + 15889662 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=832576.000000 s hg38.chr3_KI270784v1_alt 137442 149 + 184404 CACTGCTCCTTAATTTCCCAGGATCCACATTCTCATCCTTACCATTCCTTTAATCGTTTTCCTTTTATATACTTTATATGATAAATGGAGTCTTATGAACTCACTTGGAAATCTAATCACTATTTTTTAAGG--AAATATATTTTTAGCTC s panTro5.chr3 32190 149 - 202621043 CACTGCTCCTTAATTTCCCAGGATCCACATTCTCGTCCTTACCATTCCTTTAATCGTTTTCCTTTTATATACTTTATATGATAAATGGAGTCTTATGAACTCACTTGGAAATCTAATCACTATTTTTTAAGG--AAACATATTTTTAGCTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 25498 149 - 205426864 CACTGCTCCTTAATTTCCCAGGATCCACATTCTCGTCCTTACCATTCCTTTAATCGTTTTCCTTTTATATACTTTATATGATAAATGGAGTCTTATGAACTCACTTGGAAATCTAATCACTATTTTTTAAGG--AAACATATTTTTAGCTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 43966 149 + 508821 TACTGCTCCTTAATTTCCCAGGATCCACATTCTCATCCTTACTATTCCTTTAATCGTTTTCCTTTTATATACTTTATATGTTAAATGGAGTCTTATGAACTCACTTGGAAATCTAATCACTATTTTTTAAGA--AAATATATTTTTAGCTC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44695373 149 + 86207423 CACTGCTCCTTAATTTCCCAGGATCCACATTCTCATCCTTACCATTCCTTTAATCATTTTCCTTTTATACACTTTATATGTTAAATGGAGTCTTACGAACTCTCTTGGAAATCTAATCACTATTTTTTAAGG--AAATATATTTTTAGCTC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81740839 148 + 180051392 CACTGTTCCTTAATTTCCCAGGATCCACATTCTCATCCTTACCATTCCTTTAATCGTTTTCCTTTTACACACTTTATATGTTAAATGGAGTCTTATGAACTCACTTGGGAATCTAATCACTA-TTTTTAAGT--AAATATATTCTTAGCTC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17368086 148 - 20287406 CACTGTTCCTTAATTTCCCAGGATCCACATTCTCATCCTTACCATTCCTTTAATCGTTTTCCTTTTACACACTTTATATGTTAAATGGAGTCTTATGAACTCACTTGGGAATCTAATCACTA-TTTTTAAGT--AAATATATTCTTATCTC i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 78998932 148 + 91010382 CACTGTTCCTTAATTTCCCAGGATCCACATTCTCATCCTTACCATTCCTTTCATCATCTTCCTTTTACACACTTTATATGTTAAATGGAGTCTTATGAACTCACTTGGGAATCTAATCATTA-TTTTTAAGT--AAATATATTCTTAGCTC i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3387233 148 + 21726897 CACTGTTCCTTAATTTCCCAGGATCCACATTCCCATCCTTACCATTCCTTTAATCGTTTTCCTTTTACATACTTTATATGTTAAATGGAGTCTTATGAACTCACTTGGGAATCTAATCACTA-TTTTTAAGT--AAATATATTCTTAGCTC i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81103229 130 - 204313951 CTCTGCTCCTTAATTTCCCAGGATCCACATTCTCCTCCTTACCATTCCTTTAATTCTTTTTCATTAATATGCTTTATATCTTAAATGGAGTTT------------------AATAATCACTA-TTTTTAAGT--AAATATATTCTTAGCTT i calJac3.chr2 C 0 I 568 s saiBol1.JH378106 16105482 132 - 71252344 CTCTGCTCCTTAATTTCCCAGGATCCACATTCTCATCCCTACCATCCCTTTAACTGTTTTTTGTTAATATACTTTATATGTTAAATGGAGTCT------------------TCTAATCACTA-TTTTTAAGTAAAAACATATTCTTAGCTC i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5438362 130 + 12262279 CTCTGCTCCTTAATGTCCCAGGATCCACATTCTCATCCTTACCATTCCTTTAATTGTTTTTCGTTAATATACTTTATATGTTAAATGGAGCCT------------------TCTAATCACTA-TTTTTAAGT--AAATATATCCTTAGCTC i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4118077 130 + 15889662 CTCTGCTCCTTAATTTCCCAGGATCCACATTCTCATCCTTACCATTCCTTTAATGGTTTTTCGTTAATATACTTTATATGTTAAATGGAGTCT------------------TCTAATCACTA-TTTTTAAGT--AAATATATTCTTAGCTC i aotNan1.NW_018506370v1 I 9 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=1317844.000000 s hg38.chr3_KI270784v1_alt 137591 228 + 184404 AAAACTTCATTTTCAAACATAACCAGTTTGCATGTTGAGAACAGATTACAGCTAAACAGATTGTACACACGCACA------------------------------CATTCTGGATTTATTGTATTTACGTGGTGTAATCACCATCTTGTATCTAAGG--------TCCTGATATCTTGGAGG-AAAATGAAATATGAATTTGGAGATAAGAGATTGTTGGTCTTGTATTTATATTACCTAAAACAACTCATGCAGAACTGGTAAGAA s panTro5.chr3 32339 228 - 202621043 AAAACTTCATTTTCAAACATAACCAGTTTGCATGTTGAGAACAGATTACAGCTAAACAGATTGTACACACGCACA------------------------------CATTCTGGATTTATTGTATTTACGTGGTGTAATCACCATCTTGTATCTAAGG--------TCCTGATATCTTGGAGG-AAAATGAAATATGAATTTGGAGATAAGAGATTGTTGGTCTTGTATTTATATTACCTAAAACAACTCATGCAGAACTGGTAAGAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 25647 228 - 205426864 AAAACTTCATTTTCAAACATAACCAGTTTGCATGTTGAGAACAGATTACAGCTAAACAGATTGTACACACGCACA------------------------------CATTCTGGATTTATTGTATTTACGTGGTGTAATCACTATCTTGTATCTAAGG--------TCCTGATATCTTGGAGG-AAAATGAAATATAAATTTGGAGATAAGAGATTGTTGGTCTTGTATTTATATTACCTAAAACAACTCATGCAGAACTGGTAAGAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 44115 228 + 508821 AAAACTTCATTTTCAAACATAACCAGTTTGCAAGTTGAGAACAGATTACAGCTAAACAGATTGTACACATGCACA------------------------------CATTCTGGATTTATTGTATTTATGTGGTGTAATCACCATCTTGTATCTAAGG--------TCCTGATATCTTGGAGG-AAAATGAAATATGAATTTGGAGATAAGAGATTGTTGGTCTTGTATTTATATTACCTAAAACAACTCATGCAGAACTGGTAAGAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44695522 229 + 86207423 AAAACTTCATTTTCAAACATAACCAGTTTGAAGATTGAGAACAGATTACAGCTAAACAGATTATACACATGCACA------------------------------CATTCTGGATTTATTGTATTTATGTGTTGTAATCACCATCTTGCATCTAAGG--------TCCTGATATCTTGGAGGAAAAATGAAATATGAATTTGGAGATAAGAGATTGTTGGTCTTGTATTTATATTATCTAAAACAACTCATGCAGAACTGGTAAGAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81740987 263 + 180051392 AAAACTTCATTTTCAAACATAACCAGTTTGCAAGTTGAGAACAGATTACAACTAAACAGATTATacacacacacacacacacacacacacac----GTGCACGTGCATTCTGGATTTATTGTATTTGTGCGGTGTAATCATCATCTTGCATCTAAGGTACTCTGATCCTGATATCTTGGAGGAAAAATGAAATATGAATTTGGAGATAAGAGATTGTTGGTTTTGTATTTCTATTACCTAAAACAACTCATGTAGAACTGATAAGAA i rheMac8.chr6 C 0 I 55428 s macNem1.NW_012016021v1 17368234 267 - 20287406 AAAACTTCATTTTCAAACATAACCAGTTTGCAAGTTGAGAACAGATTACAACTAAACAGATTATacacacacacacacacacacacacacacacaAGTGCACGTGCATTCTGGATTTATTGTATTTGTGCGGTGTAATCATCATCTTGCATCTAAGGTACTCTGATTCTGATATCTTGGAGGAAAAATGAAATATGAATTTGGAGATAAGAGATTGTTGGTTTTGTATTTCTATTACCTAAAACAACTCATGTAGAACTGGTAAGAA i macNem1.NW_012016021v1 C 0 I 55504 s chlSab2.chr4 78999080 251 + 91010382 AAAACTTCATTTTCAAACATAACCAGTTTGCAAGTTGAGAACAGATTACAGCTAAACAGATTATACACAGACACACACAC----------------GTGCACGTGCATTCTGGATTTATTGTATTTATGCGGTGTAATCATCATCTTGCATCTAAGGTACTCTGATCCTGATATCTTGGAGGAAAAATGAAATATGAATTTGGATATAAGAGATTGTTGGTTTTGTATTTCTATTACCTAAAACAACTCATGTAGAACTGGTAAGAA i chlSab2.chr4 C 0 I 47313 s colAng1.NW_012115488v1 3387381 249 + 21726897 AAAACTTCATTTTCAAACATAACCAGTTTGCAAGTTGAGAACAGATTACAACTAAACAGATTATACACACACACACAC------------------ATGCACGTGCATTCTGGATTTATTGTATTTATGCGGTGTAATCATCATCTTGCATCTAAGGTACTCTGATCCTGATATCTTGGAGGAAAAATGAAATATGAATTGGGAGATAAGAGATTGTTGGTTTTGTATTTCTATTACCTAAAACGACTCATGTAGAACTGGTAAGAA i colAng1.NW_012115488v1 C 0 I 61650 s calJac3.chr2 81103927 242 - 204313951 aAAACTTCATTTTCAAACATAACC-------------AGAACAGTTTACAGCTAAACAGATTacacacaaacacacacacacacacacacaca------------caTTATGGATTTATCATATTTATGTGATATAATCATCATCTTGCATCTAAGGTACTCTGATCCTGATATCTTAGGGGAAAAATGAAATATGAATTTGGATATAACAGATTGTTGTTTTTGTATTTATGTTACCTAAAACAACTCATCTAGAACTGGTAAGAA i calJac3.chr2 I 568 I 7 s saiBol1.JH378106 16105614 234 - 71252344 AAAACTTCATTTTCAAACATAACC-------------AGAACAGATTACAGCTAAACAGATTacacacacacacacacacacacacaca--------------------ATGGATTTATCATATTTCTGTGATATAGTCATCATCTTGCATGTAAGGTACTCTGATCTTGATATCTTAGGGGAAAAATGAAATATGAAATTGGAGATAACAGATTGTTGGTTTTGTATCTATGTTACCTAAAACAACTCATCTAGAACTGGTAAGAA i saiBol1.JH378106 C 0 I 14 s cebCap1.NW_016107331v1 5438492 226 + 12262279 AAAACTTCATTTGCAAACATCACC-------------AGAACAGATTACAGCTAAATAGATTATACACACACACACACATT----------------------------ATGAATGTATCATATTTCTGTGATATAATCATCATCTTGCATCTAAGGTACTCTGATCCTGATATCCTAGGGGAAAAATGAAATATGAATTTGGAGATAACAGATTGTTGGTTTTGTATTTATGTTACCTAAAACAACTTATATAGATCTGGTAAGAA i cebCap1.NW_016107331v1 C 0 I 42906 s aotNan1.NW_018506370v1 4118207 230 + 15889662 AAAACTTCATTTTCAAACATAACC-------------AGAACATATTACAGCTAAACAGATTacacatacacacacacacaTATT------------------------ATGGATTTATCATATTTATGTGATATAATCATCATCTTGCATCTAAGATACTCTGATCCTGATATCTTAGGGGAAAAATGAAATATGAATTTGGAGATAACAGATTGTTGGTTTTGTATTTATGTTACCTAAAACAACTCATCTAGAACTGGTAAGAA i aotNan1.NW_018506370v1 C 0 I 53301 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=21777.000000 s hg38.chr3_KI270784v1_alt 137819 11 + 184404 GTTGCTTATGT s panTro5.chr3 32567 11 - 202621043 GTTGCTTATGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 25875 11 - 205426864 GTTGCTTATGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 44343 11 + 508821 GTTGCTTATGT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44695751 11 + 86207423 GTTGCTTATGT i nomLeu3.chr21 C 0 C 0 s calJac3.chr2 81104176 11 - 204313951 GTTGCTTATGT i calJac3.chr2 I 7 C 0 s saiBol1.JH378106 16105862 11 - 71252344 GTTGCTTATGT i saiBol1.JH378106 I 14 I 35380 e aotNan1.NW_018506370v1 4118437 53301 + 15889662 I e cebCap1.NW_016107331v1 5438718 42906 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3387630 61650 + 21726897 I e rheMac8.chr6 81741250 55428 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78999331 47313 + 91010382 I e macNem1.NW_012016021v1 17368501 55504 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=3205.000000 s hg38.chr3_KI270784v1_alt 137830 3 + 184404 GCA s panTro5.chr3 32578 3 - 202621043 TCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 25886 3 - 205426864 TCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 44354 3 + 508821 TCA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44695762 3 + 86207423 TCA i nomLeu3.chr21 C 0 C 0 s calJac3.chr2 81104187 3 - 204313951 TCA i calJac3.chr2 C 0 I 37530 e aotNan1.NW_018506370v1 4118437 53301 + 15889662 I e cebCap1.NW_016107331v1 5438718 42906 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16105873 35380 - 71252344 I e colAng1.NW_012115488v1 3387630 61650 + 21726897 I e rheMac8.chr6 81741250 55428 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78999331 47313 + 91010382 I e macNem1.NW_012016021v1 17368501 55504 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=1054.000000 s hg38.chr3_KI270784v1_alt 137833 2 + 184404 CA s panTro5.chr3 32581 2 - 202621043 CA i panTro5.chr3 C 0 C 0 s panPan2.chr3 25889 2 - 205426864 CA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 44357 2 + 508821 CT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44695765 2 + 86207423 CA i nomLeu3.chr21 C 0 C 0 e aotNan1.NW_018506370v1 4118437 53301 + 15889662 I e cebCap1.NW_016107331v1 5438718 42906 + 12262279 I e calJac3.chr2 81104190 37530 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16105873 35380 - 71252344 I e colAng1.NW_012115488v1 3387630 61650 + 21726897 I e rheMac8.chr6 81741250 55428 + 180051392 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 78999331 47313 + 91010382 I e macNem1.NW_012016021v1 17368501 55504 - 20287406 I e macFas5.chr6 16489 24429 - 181584905 I a score=2337892.000000 s hg38.chr3_KI270784v1_alt 137835 385 + 184404 cagaagggaaatgtggggtcggggccc------ccacacagtccccactgtggtactgcctagtggagctgtgggaagaaagccaccctcctccagaccctggaatggtagatctactgacagcttgcactgtgttcctggaaaagctgcagaaactcaacccaggggggggtctgta---tcctgcaaagccacagggacagagttgcccaaggtcctgggagcccacctcttacatcagagtgacctggatgtgagacatggggtcaaagaagatcactttggagcttcaagaactgactgccctgctggatttcagacttgcatgaggcctgtgacctctttgctttggccaatttctcccatttggaatgggtgtatttatctaatgcct s panTro5.chr3 32583 385 - 202621043 TAgaagggaaatgtggggtcggcgccc------ccacacagtccccactgtggtactgcctagtggagctgtgggaagaaagccaccctcctccagaccctggaatggtagatctactgacagcttgcactgtgttcctggaaaagctgcagaaactcaacccaggagggggtctgta---tcctgcaaagccacagggacagagttgcccaaggtcctgggagcccacctcttacatcagagtgacctggatgtgagacatggggtcaaagaagatcattttggagcttcaagaactgactgccctgctggatttcagacttgcatgaggcctgtgacctctttgctttggccaatttctcccatttggaatgggtgtatttatctaatgcct i panTro5.chr3 C 0 C 0 s panPan2.chr3 25891 385 - 205426864 TAgaagggaaatgtggggtcggcgccc------ccacacagtccccactgtggtactgcctagtggagctgtgggaagaaagccaccctcctccagaccctggaatggtagatctactgacagcttgcactgtgttcctggaaaagctgcagaaactcaacccaggagggggtctgta---tcctgcaaagccacagggacagagttgcccaagctcctgggagcctacctcttacatcagagtgacctggatgtgagacatggggtcaaagaagatcattttggagcttcaagaactgactgccctgctggatttcagacttgcatgaagcctgtgacctctttgctttggccaatttctcccatttggaatgggtgtatttatctaatgcct i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 44359 385 + 508821 TAgaagggaaatgtggggtcggggccc------ccacacagtccccactgtggtactgcctagtggagctgtgggaagaaagccaccctcctccagaccctggaatggtagatctactgacagcttgcactgtgttcctggaaaagctgcagaaactcaacccaggagggggtctgta---tcctgcaaagccacagggacagagttgcccaaggtcctgggagcccacctcttacatcagagtgacctggatgtgagacatggggtcaaagaagatcattttggagcttcaagaactgactgccctgctggatttcagacttgcatgaggcctgtgacctctttgctttggccaatttctcccatttggaatgggtgtatttatctaatgcct i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44695767 387 + 86207423 TAgaagggaaacatggggtcagagccc------ccacacggtccccactgtggtactgcctagtggagctgtgggaagagagccaccctcctccagaccctggaatgctagatctactgacagcttgcactgtgttcctggaaaagctgcagaaactcaacccagga-gggttctgcaaagccctgcaaagccacagggacagagtcgcccaaggtcctgggagcccacctcttgcatcagagtgacctggatgtgagacatggggtcaaagaagatcattttggagcttcaagaattgactaccctgctggatttcagacttgcatgaggcctgtgacctctttgctttggccaatttctcccatttggaatgggtgtatttatctaatgcct i nomLeu3.chr21 C 0 I 1063 s rheMac8.chr6 81796678 381 + 180051392 cagaagggaaatgtggggtcagaacac------ccacacagtccccactgtggtactgcctagtggagctgcgggaagaaagccaccctcctccagaccctagaatgatagatctactgacaactagcactgtgttcctggaaaaactgcagaaactcaacccaggagggggtctatg---tcctgcaaag---caggggcatagttgcccaag-tcttgggagcccacctcttgcatcagagtgatctggatgtgagaaatggggtcaaaaaagataattttagagcttcaagaactgactgccctactggatttcagacttgcatcagacctgtgacctctttgctttggtcaatttctcccatttgaagtgagtatatttatccaatgcct i rheMac8.chr6 I 55428 C 0 s macNem1.NW_012016021v1 17424005 381 - 20287406 cagaagggaaatgtggggtcagaacac------ccacacagtccccactgtggtactgcctagtggagctgcgggaagaaagccaccctcctccagaccctagaatgatagatctactgacaacttacactgtgttcctggaaaaactgcagaaactcaacccaggagggggtctatg---tcctgcaaag---caggggcatagttgcccaag-tcttgggagcccacctcttgcatcagagtgatctggatgtgagaaatggggtcaaaaaagataattttagagcttcaagaactgactgccctactggatttcagacttgcatcagacctgtgacctctttgctttggtcaatttctcccatttgaagtgagtatatttatccaatgcct i macNem1.NW_012016021v1 I 55504 C 0 s chlSab2.chr4 79046644 381 + 91010382 cagaagggaaatgtggggtcagaacac------ccacacagtccccactgcggtactgcctagtggagctgcgggaagacggccaccctcctccagaccctagaatggtagatctactgacagcttgcactgtgttcctagaaaagctgcagaaactctaccaaggagggggtctatg---tcctgcaaag---caggggcatagttgcccatg-tcttgggagcccacctcttgcatcagagtgatctggatgtgagaaatggggtcaaagaagataattttagagcttcaagaactgactgccctgctggatttcagacttgcatcagacctgtgacctctttgctttggccaatttctcccatttgaaatgagtatatttatccaatgcct i chlSab2.chr4 I 47313 C 0 s colAng1.NW_012115488v1 3449280 381 + 21726897 cagaagggaaatgtggggtcagaacac------ccacacagtccccactctggtactgcctagtggagctgtgggaagaaagccaccctcctgcagaccctagaatggtagatctactgagagcttgcactgtgttcctggaaaagctgcagaaactcaacccaggagggagtctatg---tcctgcaaag---cacgggcatagttgcccaag-tcttgagagcctacctcttgcatcagagtgatctggatgtgagaaatggggtcaaagaagataattttggagcttcaagaactgactgccctgctggatttcagatttgcatcagacctgcgacgtctttgctttggtcaatttctcccatttgaaatgagtatatttatccaatgcct i colAng1.NW_012115488v1 I 61650 C 0 s calJac3.chr2 81141720 375 - 204313951 cagaagggaaatgtggggttgcagacc------ccacgcagtccccactggggtactgattagtagagatctgagaagagggccaccctcct-cagatcccaggatggtagatctactgacagcttgcattatgtgcctggaaaagctgcagaaactcaacccaggaggggatctata---tcctgcaaagccacagtggcagaattgcccaaggtcatgagagcccacctcttgcatcagagtgatctggatgtgagacatggagtcaaagaagatcactttggagcttgaacaattgactgccctgctggatttcagacttgcacgaggc---------ctttgttttggccaatttcttgcatttggaatagatgtatttatctagtgcct i calJac3.chr2 I 37530 C 0 s saiBol1.JH378106 16141253 381 - 71252344 caaaagggaaatgtggggttggtgcccccctcaccccacagtccccactgaggtactgcttagtggagctgtgggaagagggccaccatcct-cagatcccaggatggtagatctactgacagcttgcactatgtgcctggaaaagctgcagaaactcaacccaggaggggatttgga---tcctgcaaagccacagtggcagagttgcccaaggtcatgggagccaacctcttgcatcagagtgatctggatgtgagacatggagtcaaagaagatcattttggagcttgaacaattgactgccctgctggatttcagacttgcatgaggc---------ctttgttttggccaatttcttgcatttggaacaggtgtatttatccaatgcct i saiBol1.JH378106 I 35380 C 0 s cebCap1.NW_016107331v1 5481624 374 + 12262279 cagaagggaaatgtggggttggagccc------ccacacagtccccactggggtactgcttagtggagctgtgggaagagggccactgtcct-cagatcccaggatggtagatctactgatagcttgcactatgt-cctggaaaagctgcagaaactcaacccaggaggggatctgta---tcctgcaaagccacagtggcagagttgcccaaggtcatgggagccaacctcttgcatcagagtgatctggatgtgagacatggagtcaaagaagatcattttggagcttgaacaattgactgccctgctggatttcagacttgcatgaggc---------ctttgttttggccaatttcttgcatttggaataggtgtatttatctaatgcct i cebCap1.NW_016107331v1 I 42906 C 0 s aotNan1.NW_018506370v1 4171738 375 + 15889662 cagaagggaaatgtggggttggagccc------ccacacagtccccactggggtactgcttagtggagctgtgggaagagggccaccgtcct-cagatcccaggatggtagatctactgacaacttgcactatgtgcctggaaaacctgcagaaactcaacccaggaggggatctgta---tcctgcaaagccacagtggcagagttgcccaaggtcatgggagccaacctcttgcatcagagtgatctggatgtgagacatggagtcaaagaagatcattttggagcttgaacaattgactgccctgctggatttcagacttgcatgaggc---------ctttgttttggccaatttcttacatttggaataggtgtatttatccaatgcct i aotNan1.NW_018506370v1 I 53301 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=9672227.000000 s hg38.chr3_KI270784v1_alt 138220 1639 + 184404 atacccccattgtatctgggaagtaaataacttgcttttaattttacaagctcataggcagaagaaatttgccttgtctcagattagactttggactgtggactttcaagtcaatgctgaaacgagttaagactttaggggactgttggaagggcatgactgtgtttcaaaatgtgaggacatgagatttgggaggggcc--agggCAAAAtgatgtcg-ttgtctgtgtccccacccaaatctcatcttgaattgt-agctcccataatgcccatgtatcatgggagggacctggtgggaggtaactgaatcatgggggtgggtttttcccatgctgttctcatgacagtgagtaagtctcaggagagctgatggttttataatgggcagttcccctgcacaag----ctctcttgcctgcttctatgtaagacatgactttgcttctcctttgcctcgtgacatgatggtgaggtctccccagccatgtggaaccatgagtcaattaaaactgtttcctttataaattacccagtctt-ggtacgtacttattaacagtgtgagaatggactaatacaacagacaacctacagaatgggagaaatattcacaaactattcatccaacaaaggactaatatccacaatttacaagaaacttaagcaaacaagcaaaaaaccaataaccccatta-aaaaatggtcaaagaacatgaacagacactattgaaaagaag----acaaacaaccatcaaacatatgaaaagatgctaatcatcactaatcatcagagaaacgcaaatcaaaaccatagtgagatacagtctcataccagtcagaatggcttttggttaaatagtcaaaaaataacagctgctggtggggctgcggagaaaagggagttcttgtacactgttggtgggaatgtgaattagttcagtcactgtagaaagcagtttgcagatttcttaaagaactcagagctgaactaccaagttacccagcaaccccattactggatat------acacccaaaggaaaatacattgttccaccgaaaagatacatacactacacacacccatacattcattgcaacactagtcacaatagcaaagacatgcaaccaaaccaagtgcccatcagcagtggattggataaagaaaatgtggtacatatgcaacatgtaatactacacagccataaagaagaacgaaac--tg--ttatttgtagcaacatggatacagccagaggccattaccttaagtgaactaaagcagaaacagaaaaccaaataccatgtgttctcactgataagtgggaactaaacgttgggtacacatggttataaagatggggacaactgacgctgggg-ataccagaggagagactgagaaactactta-----------------tttctgggtggtgggttcagtcatactccaaacctgagcatcacatcatatatctttgt-aacaaacctgcacatctacccctggaatataaaataaaagttgaaatttaaaaagaaaAGAATGAAAAACTAGAGGGGAACAGAGGTAACAAAAAATAATGAGTGCCCTTATAGGAAATGAAAATCTGATTTAAAAAACTGTATTAATTAAAAATCATGATAATAGAGTAAGCTTTTGTTAAACTTATTTTTT s panTro5.chr3 32968 1640 - 202621043 atacccccattgtatctgggaagtaaataacttgcttttaattttacaagctcataggcagaagaaatttgccttgtctcagattagactttggactgtggactttcgagtcaatgctgaaacgagttaagactttaggggactgttggaagggcatgactgtgtttcaaaatgtgaggacatgagatttgggaggggcc--agggCAAAATGATGTCA-ttgtctgtgtccccacccaaatctcatcttgaattgt-agctcccataatgcccatgtatcatgggagggacctggtgggaggtaactgaatcatgggggtgggtttttcccatgctgttctcatgacagtgagtaagtctcaggagagctgatggttttataatgggcagttcccctgcacaag----ccctcttgcctgctaccatgtaagacatgactttgcttctcctttgcctcgtgacatgatggtgaggcctccccagccatgtggaaccatgagtcaattaaaactgtttcctttataaattacccagtctt-ggtacgtactttttaacagtgtgagaatggactaatacaacagacaacctacagaatgggagaaatattcacaaactattcatccaacaaaggactaatatccacaatttacaaggaacttaagtaaacaagcaaaaaaccaataaccccatta-aaaaatggtcaaagaacatgaacagacactattgaaaagaagacacacaaacaaccatcaaacatatgaaaagatgctaatcatcactaatcatcagagaaacgcaaatcaaaaccatagtgagatacagtctcataccagtcagaatggcttttggttaaatagtcaaaaaataacagctgctggtggggctgtggagaaaagggatttcttgtacactgttggtgggaatgtgaattagttcagtcactgtagaaagcagtttgcagatttcttaaagaactcagagctgaactaccaagttacccagcaaccccattactggatatatgaaaatatccaaaggaaaatacattgttccaccaaaaagatgcatacactacacacacccatacattcattgcaacactagtcacaatagcaaagacatgcaaccaaaccaagtgcccatcagcagtggattggataaagaaaatgtggtacatatgcaacatgtaatactacacagccataaagaagaacaaaac--tg--ttatttgtagcaacatggatgcagccagaggccattaccctaagtgaactaaagcagaaacagaaaaccaaataccacgtgttctcactgataagtgggaactaaacgttg---------ggttataaagatggggacaactgacgctgggg-ataccagaggagagactgagaaactactta-----------------tttctgggtggtgggttcaatcatactccaaacctgagcatcacaccatatatctttgt-aacaaacctgcacatctacccctggaatataaaataaaagttgaaatttaaaaagaaaAGAATGAAAAATAAGAGGGGAACAGAGGTAACAAAAAATAATGAGTGCCCTTATAGGAAATGAAAATCTGATTTAAAAAACTGTATTAATTAAAAATCATGATAATAGAGTAAGCTTTTGTTAAACTTATTTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 26276 1649 - 205426864 atacccccattgtatctgggaagtaaataacttgcttttaattttacaagctcataggcagaagaaatttgccttgtctcagattagactttggactgtggactttcgagtcaatgctgaaacgagttaagactttaggggactattggaagggcatgactgtgtttcaaaatgtgaggacatgagatttgggaggggcc--agggCAAAAtgatatcg-ttgtctgtgtccccgcccaaatctcatcttgaattgt-acctcccataatgcccatgtatcatgggagggacctggtgggaggtaactgaatcatgggggtgggtttttcccatgctgttctcatgacagtgagtaagtctcaggagagctgatggttttataatgggcagttcccctgcacaag----ccctcttgcctgctaccatgtaagacatgactttgcttctcctttgcctcgtgacatgatggtgaggcctccccagccatgtggaaccatgagtcaattaaaactgtttcctttataaattacccagtctt-ggtacgtactttttaacagtgtgagaatggactaatacaacagacaacctacagaatgggagaaatattcacaaactattcatccaacaaaggactaatatccacaatttacaaggaacttaagtaaacaagcaaaaaaccaataaccccatta-aaaaatggtcaaagaacatgaacagacactattgtaaagaagacacacaaacaaccatcaaacatatgaaaagatgctaatcatcactaatcatcagagaaacgcaaatcaaaaccatagtgagatacagtctcataccagtcagaatggcttttggttaaatagtcaaaaaataacagctgctggtggggctgtggagaaaagggatttcttgtacactgttggtgggaatgtgaattagttcagtcactgtagaaagcagtttgcagatttcttaaagaactcagagctgaactaccaagttacccagcaaccccattactggatatatgaaaatatccaaaggaaaatacattgttccaccaaaaagatgcatacactacacacacccatacattcattgcaacactagtcacaatagcaaagacatgcaaccaaaccaagtgcccatcagcagtggattggataaagaaaatgtggtacatatgcaacatgtaatactacacagccataaagaagaacgaaac--tg--ttatttgtagcaacatggatgcagccagaggccattaccctaagtgaactaaagcagaaacagaaaaccaaataccacgtgttctcactgataagtgggaactaaacgttgggtacacatggttataaagatggggacaactgacgctgggg-ataccagaggagagactgagaaactactta-----------------tttctgggtggtgggttcaatcatactccaaacctgagcatcacaccatatatctttgt-aacaaacctgcacatctacccctggaatataaaataaaagttgaaatttaaaaagaaaAGAATGAAAAATAAGAGGGGAACAGAGGTAACAAAAAATAATGAGTGCCCTTATAGGAAATGAAAATCTGATTTAAAAAACTGTATTAATTAAAAATCATGATAATAGAGTAAGCTTTTGTTAAACTTATTTTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 44744 1643 + 508821 atacccccattgtatctgggaagtaaataacttgcttttaattttacaagctcataggcagaagaaatttgccttgtctcagattagactttggactgtggactttcgagtcaatgctgaaacgagttaagactttaggggactgttggaagggcatgactgtgtttcaaaatgtgaggacatgagatttgggaggggcc--agggCAAAAtgatatcg-ttgtctgtgtccccacccaaatctcatcttgaattgt-agctcccataatgcccatgtatcatgggagggacctggtgggaggtaactgaatcatgggggtgggtttttcccatgctgttctcatgacagtgagtaagtctcaggagagctgatggttttataatgggcagttcccctgcacaaa----ctctcttgcctgctaccatgtaagacatgactttgcttctcctttgcctcgtgacatgatggtgaggcctccccagccatgtggaaccatgagtgaattaaaactgtttcctttataaattacccagtctt-ggtacgtacttattaacagtgtgagaatggactaatacaacagacaacctacagaatgggagaaatattcacaaactattcatccaacaaaggactaatatccacaatttacaaggaacttaggtaaacaagcaaaaaaccaataaccccatta-aaaaatggtcaaagaacatgaacagacactattgaaaagaagacacacaaacaaccatcaaacatatgaaaagatgctaatcatcactaatcatcagagaaacgcaaatcaaaaccatagtgagatacagtctcataccagtcagaacggcttttggttaaatagtcaaaaaataacagctgctggtggggctgcggagaaaagggagttcttgtacactgttggtgggaatgtgaattagttcagtcactgtagaaagcagtttgcagatatcttaaagaactcagagctgaactaccaagttacccagcaaccccattactggatat------acacccaaaggaaaatacattgttccaccgaaaagatagatacactacacacacccatacattcattgcaacactagtcacaatagcaaagacatgcaaccaaaccaagtgcccatcagcagtggattggataaagaaaatgtggtacatatgcaacatgtaatactacacagccataaagaagaacgaaac--tg--ttatttgtagcaacatggatgcagccagaggccattaccctaagtgaactaaagcagaaacagaaaaccaaataccatgtgttctcactgataagtgggaactaaacgttgggtacacatggttataaagatggggacaactgacgctgggg-ataccagaggagagactgagaaactactta-----------------tttctggatggtgggttcaatcatactccaaacctgagcatcacaccatgtatctttgt-aacaaacctgcacatgtacccctggaatataaaataaaagttgaaatttaaaaagaaaAGAATGAAAAATAAGAGGGGAACAGAGGTAACAAAAAATGATGAGTGCCCTTATAGGAAATGAAAATCGGATTTAAAAAACTGTATTAATTAAAAATCATGATAATAGAGTAAGCTTTTGTTAAACTTATTTTTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44697217 1617 + 86207423 atacccccattgtatctaggaagtaaataacttgcttttaattttacaggctcataggcagaagaaatttgccttatctcagattagactttggactgtggagtttcgagtcaacgctgaaacgagttaagactttaggggactgttggaagggcgtcattgtgtttcaaaatgtgaggacgtgagatttgggaggggcc--ggggcaaaatgatatggtttagctgtgtccccacccaaatctcatcttgact---------------tgcccatgtgtcatgggagggacctggtgggaggtaaccgaatcatgggggtgggtttttcccatgctgttctcatgacagtgagtaagtctcaggagagctgatggttttataatgggcagttcccctgctcaagctctccctcttgcctgctaccatgtaagacatgactttacttctcctttgcctcctgccatgatggt----------cagccatgtggaactgtgagtcaattaaacctgtttcctttataaattacccagtcttgggtacatacttattaacagtatgagaaaggactaataaaacagacaacctacagaatgggagaaatagtcacaaactattcatccaacaaaggactaatatgcacaatttacaag-aacttaagtcaacaagcaaaaaaccagtaaccccatta-aaaaatggtcaaagaacatgaacggacactattgaaaagaagacatacaaacagccatcaaacatatgaaaagatgctaatcatcactaatcatcagagaaatgcaaatcaaaaccataatgagatacaatctcataccagtcagaatggcttttggttacatagtcaaaaaataacagctgctggtggggctgcggagaaaagagaattcttgtacactgttggtgggaatgtgaattagtttagtcactgtagaaagcagtttgcagatttcttaaagaactcagagctgaactaccatgtggcccagcaaccccattactggatat------acacccaaaggaaaatacactgttccaccgaaaagatacat---------acacccatacattcattgcaacactagtcacaatagcaaagacatgcaaccaaaccaagtgcccatcaacattggattggataaagaaaatgtggtacatatgcaacatgtaataccacacagccataaagaagaacaaatctatg--ttatttgtggcaacatggatgcagccagaggccattaccctaagtgaactaaagcagaaacggaaaaccaaataccatgtgttctcacttataagtgggaactaaacattgggtatacatggttataaagatggggacaactgacgctgggg-ataccagaggagagactgagaaactactta-----------------ttcccgggtgatgggttcgatcatactccaaacctgagcatcacaccatagatctttgt-aacaaacctgcacatggacccctggaatataaaataaaagttgaaatttaaaaagaaaAGAATGAAAAATAAGAGGGGAAGAGAGGTAACAAAAAATAATGAGTGCCCTTATAGGAAATTAAAATCTGATTTAAAAAACTGTATTAATTAAAAATCATGATAATAGAGTAAGCTTTTGTTAAACTTATTTTTT i nomLeu3.chr21 I 1063 C 0 s rheMac8.chr6 81797059 1655 + 180051392 atacccccatttcatctaggaagtcagtaacttgcttttaattttacaggctcataggcagaagaaacttgccgtgtctcagattagactttggactgaggacatttgattcaatgctgaaatgagttaagactttaggggactgttggaaggacatgattgtgtttcaaaatgtgaggacatgagatttgggaggggcca-ggggaagaaAgatattgtttgacttggtccccatccaaatctcatcttgaattgt-gacttccataatgcccatgtgttgtgggagggacttggtgggaggtaatttaatcatgaaggcggatttttcccatgctgttcttatgatagtgaataagtctcaggagagctgatagttttataatgggcagttcccctgcaaaag----ctc-tttacctgccaccatgtaagacatgcctttgcttctccttttcctcctgccatgatggtgaggccttcccagccatgtggaactgtgagtcaattaaatctctgtcctttataaattacccagtcttaggtacgtacttattaacagtgtgagaacagacgattacaacagacagcctactaaatgggagaaatagtcacaaactaagcatccaacaaaggactaatatccacaatttatgaagaacttaagtcaacaagcaaaaaaccaataacctcatta-aaaaatggccaaagaacataaacagacactgttgaagagaagaaatacaaacagccatcaaatatataaaaagatgctaatcatctctaatcatcagagaaatgcaaatcaaaatcataatgaggtacaatctcataccagtcagaatggtttttggttaaaaagtcgaaaaataacagccactggtgggtctgtgaagaaaagggaattcttatacactgttgcagggaatgtgaattagttcagtcactgtagaaaacagtttgcagatttcttaaagaactaagagttgaactaccatgtgacccaacaatcccattactggatat------atacccaaaggaaaatacattgctccaccaaaaagatacat-------gcacctatatatattcattgcaacactagtcacaatagcaaagacatggaaccaaatcaagtgcccatcaacagtggattggataaataaaatgtggtacctacacaacatgtaatactacacagccataaagaagaacaaaactatg--ttatttgtagcaacatgggtgcagccagagaccattatactaagtgaactaaagcagaaacagaagaccaaataccatctgttctcacttataagtgggaactaaccattggctatacatggttgtaaggatggggacaactgacactggggaatacaggaggagagattgagaaactacttattgggtatgatgctcacttcctgggtggtaggttcgatcacactccaaacctgagcatcacatgatatgtctttgt-aacaaacctgcatatgtactcctggaatataaaa-aaaagttgaaatttaaaaagaaaGGAATAAAAAATA--AGGGGAAGAGAGGTAACAAAAAATAATGAGTGCCCTTATAGGAAATTAAAATCTGATTTAAAAAACTGTATTAATTAAAAATCATGACAATAGAGTAAACTTTTATTAAACTTCTTTTTT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17424386 1655 - 20287406 atacccccatttcatctaggaagtcagtaacttgcttttaattttacaggctcataggcagaagaaacttgccgtgtctcagattagactttggactgaggacatttgattcaatgctgaaatgagttaagactttaggggactgttggaaggacatgattgtgtttcaaaatgtgaggacatgagatttgggaggggcca-ggggaagaaAgatattgtttgacttggtccccatccaaatctcatcttgaattgt-gacttccataatgcccatgtgttgtgggagggacttggtgggaggtaatttaatcatgaaggcggatttttcccatgctgttcttatgatagtgaataagtctcaggagatctgatagttttataatgggcagttcccctgcaaaag----ctc-tttacctgccaccatgtaagacatgcctttgcttctccttttcctcctgccatgatggtgaggccttcccagccatgtggaactgtgagtcaattaaatctctgtcctttataaattacccagtcttaggtacgtacttattaacagtgtgagaacagacgattacaacagacagcctactaaatgggagaaatagtcacaaactaagcatccaacaaaggactaatatccacaatttatgaagaacttaagtcaacaagcaaaaaaccaataacctcatta-aaaaatggtcaaagaacataaacagacactgttgaagagaagaaatacaaacagccatcaaatatataaaaagatgctaatcatctctaatcatcagagaaatgcaaatcaaaatcataatgaggtacaatctcataccagtcagaatggtttttggttaaaaagtcgaaaaataacagccactggtgggtctgtgaagaaaagggaattcttatacactgttgcagggaatgtgaattagttcagtcactgtagaaaacagtttgcagatttcttaaagaactaagagttgaactacaatgtgacccaacaatcccattactggatat------atacccaaaggaaaatacattgctccatcaaaaagatacat-------gcacctatatatattcattgcaacactagtcacaatagcaaagacatggaaccaaatcaagtgcccatcaacagtggattggataaataaaatgtggtacctacacaacatgtaatactacacagccataaagaagaacaaaactatg--ttatttgtagcaacatgggtgcagccagagaccattatactaagtgaactaaagcagaaacagaagaccaaataccatctgttctcacttataagtgggaactaaccattggctatacatggttgtaaggatggggacaactgacactggggaatacaggaggagagattgagaaactacttattgggtatgatgctcacttcctgggtggtaggttcgatcacactccaaacctgagcatcacatgatatgtctttgt-aacaaacctgcatatgtactcctggaatataaaa-aaaagttgaaatttaaaaagaaaGGAATGAAAAATA--AGGGGAAGAGAGGTAACAAAAAATAATGAGTGCCCTTATAGGAAATTAAAATCTGATTTAAAAAACTGTATTAATTAAAAATCATGACAATAGAGTAAACTTTTATTAAACTTCTTTTTT i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79047025 1647 + 91010382 atacccccattgtatctaggaattcagtaacttgcttttaattttacaggctcataggcagaagaaacttgccttgtctcagattagactttggactgaggacatttgattcgatgctgaaatgagttaagactttaggggactgttggaaggacatgattgtgtttcaaaatgtgaggacatgagattttggaggggcca-ggggaagaatgatattgtttgacttggtccccatccaaatatcatcttgaattgt-g---------atgcccatgtgttgtgggagggacttggtgggaggtaatttaatcatgaaggtggatttttcccatgctcttcttgtgatagtgaataagtctcaggagatctgatagttttataatggtcagttcccctgcaaaag----ctcttttacctgccaccatgtaagacatgcctttgcttctccttttcctcctgccatgattgtgaggcctccccagccatgtggaactgtgagtcaattaaacctcttccctttataaattacccagtcttgggtatgtacttattaacagtgtgagaacagacgattacaacagacaacctaccaaatgggagaaatagtcacaaactaagcatccaacaaagaactaatatccacaatttgtaaagaacttaagtcaacaggcaaaaaaccaataacctcatta-aaaaatggccaaagaacataaacagacactgttgaagagaagaaatacaaacagccatcaaatatataaaaatatactaatcatctctaatcatcagagaaatgcaaatcaaaataataatgagacacaatctcataccagtcagaatggcttttggttaaaaagtcaaaaaataacagccactggtgggtctgtggagaaaagggaattcttgtacactgttgtggggaatgtgaattagttcagtcattgtagaaaacagtttgcagatttcttaaagaactaagagttgaactaccacgtgacccagcaatcccattactggatat------acacccaaaggaaaatacattgctccaccaaaaagatacgt-------gcacccatatatattcattgcaacactagtcacaatagcaaagacatggaaccaaatcaagtgcccatcaacagtggattggataaacaaaatgtggtacctacacaacatgtaatactacacagccataaagaagaagaaaactatg--ttatttgtagcaacatgggtgcagccggagaccattatactaagtgaactaaagcagaaacagaagaccaaataccatctgttctcacttataagtgggaactaaccattggctatacatggttgtaaggatggggacaactgacactgggaaatacaagaggagagactgagaaactacttattgggtatgatgctcacttcctgggtggcaggttcaatcacactccaaacctgagcatcacatgatatgtctttgt-aacaaacctgcatatgtacccctggaatataaaa-aaaagttgaaatttaaaaagaaaGGAATGAAAAATA--AGGGGAACAGAGGTAATAAAAAATAATGAGTGCCCTTATAGGAAATTAAAATCTGATTTAAAAAACTGTATTAATTAAAAATCATGACAATAGAGTAAACTTTTATTAAACTTCTTTTTT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3449661 1652 + 21726897 atacccccattgtatctaggaagtcagtaacttgcttttaattttacaggctcatagacagaagaaacttgccttgtctcagattagactttggactgaggacatttgattcaatgctgaaatgagttaagactttagggaactgttggaaggacatgattgtgtttcaaaatgtgaggacatgagatttgggaggggcc--gggggagaatgatattgtttgacttggtccccatccaaatctcatcttgaattgt-gactcccataatgcccatgtgttgtgggagggacttggtgggaggtaatttaatcatgaaggtggatttttcccatgttgttcttgtgatagtgaataagtctcaggagatctgatagttttataatggacagttcccctgcaaaag----ctcttttacctgccactatgtaagacatgcctttgcttctccttttcctcctaccatgattgtgaggcctccccagccatgtggaactgtgagtcaattaaacctctttcctttataaattacccagtcttgggtatgtacttattaacagtgtgagaacagacGATTGCaacagacaacctaccaaatgggagaaatagtcacaaactaagcatccaacaaaggactaatatccacaatttataaagaacttaagtcaacaagcaaaaaaccaataacctcatta-aaaaatggccacagaacataaacagacactgttgaagagaagaaatacaaacagccatcaaatatataaaaagatgctaatcatctctaattatcagagaaatgtaaatcaaaatc---atgagatacaatctcataccactcagaatggcttttggttaaaaagtcaaaaaataacagccactggtgggtctgtggagaaaaggaaattcttgtacactgttgcggggaatgtgaattagttcagtcactgtagaaaacagtttgcagatttcttaaagaactaagagttgaactaccatgtgacccagcaatcccattactggatat------acaaccaaaggaaaatacaatgctccaccaaaaagatacgt-------gtacccatatatattcattgcaacactagtcacaatagcaaagacatggaaccaaatcaagtgcccatcaacagtggattggataaacaaaatgtgatacctacacaacatgtaatactacacagccataaagaagaacaaaactatg--ttatttgtagcaacatgggtgcagccagagaccattatatgaagtgaactaaagcagaaacagaagaccaaataccatctgttctcacttataagtgggaactaaccattggctatacatggttgtaaggatgggtacaactgacactggggaatacaagaggagagactgagaaactacttattgggtatgatgctcacttcctgggtggtaggttcgatcacactccaaacctgagcatcacacgacatgtctttgt-aacaaacctgcatatgtacccctggaatataaaa-aaaagtcaaaatttaaaaagaaaAGAATGAAAAATA--AGGGGAACAGAGGTAACAAAAAATAATGAGTGCCCTTATAGGAAATTAAAATCTGATTTAAAAAACTGTATTAATTAAAAATCATGACAATAGAGTAAACTTTTATTAAACTTCTTTTTT i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81142095 1645 - 204313951 ata-ccccattgtatctatgaagtaagtaacttccttttaattttacaggctcataggcagaagaaacttgccttgtctcagattagactttggcctgtagactttcgagtcaatgctgaaataagttaagactttggtggacttttgaaagggcacgattgtgtttcaaaatgtgaggacatgagatttgggaggggcca-ggggcagaatgacatggtttggctgggtccccatccaaatctcatcttgaattgt-aactcccatcatgtccatgtgtcctgggagggaccttgtgggaggtaattgaattgtagtggtggatttttcccatgctgttcttgtgataataagtaagtctcaggaaatctggtggttttataatggacagttcccctgcacaag----ctctcttgcatgccaccatgtaagatatgcctttgcttctcctttgccttctgccatgtttgtgaggcctccccagccatatggaactgtgagtcaattaaacctctttcttttataaattgctcagtctccagtacatacttattaacagtgtgagaacagaccaatacagcagaccacctg------gggagaaatattcagaaactatgcatccaacaaagtattaacatccacaatttataagaaacttgcatcaacaagcaaaaaaccaataaccgcatttaaaaaaatataaaagtactcaaacagatactactcaaaagaaggcatacaaatagccaacaaacatatgaaaatacataaatcatcacgaatcatcagagaaatgcaaattaaaaccataatgagatacaatctcatatcagtcagaatggcttttggttaaaaagtcaaaaaataacacctgctggtaggtctgtggagaaaagggaattcttgtacattgctggggagaatgtgaattagttcagtcactgtggaaagtggtttgcagatttctttaaaaactgacagttgacgtacaacatgacccagcaatcgcattactggatat------atacccgaaggaaaacagattgttccaccaaaaagatacat---------gcactcatacattcattgcaacaccagtcacaatagcaaagacatggaaccaaaccaagtgcccatcaacagtggattggataaagaaaatgtggtacatatgcaacatgttatactacacagtcatgaagaagaacaaaac--ta--ttttttgtggcagtatggatgcagccaaaggccattatccttagtgaactaaagcagaaacagaaaaccaaataccatgtgttctcacttataaacgggagctaaaccttgggtatacatggttataaatatggagacaattgacgatggggaatgtaagagaagggactgaaaaactacttattcagtaggatgctgacttcctgggttgtgggttcaatcatattccacatctgagcatcacatgctatatctttgt-aacagacatgcacatgtac-tatggaatctaaaataaaacttgaaaTTTAAATAGAGAGGAATGAAAAATAAGAGGGGAAAAGAGGTAACAAAAAATAGTAAGTGCCCTTATAGAAAACTAAAATCTGATTTTAAAAATTGTATTAGTTAAAAATC---ATAATAGAGTATACTGTTATTAAACTTCTTCTTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16141634 1656 - 71252344 atacccccattgtaactatgaagtaagtaactt-cttttaattttacaggcttataggcagaagaaacttgccttgtttcagattagattttggactgcagacttttgagtgaatgctgaaatgagttaagactttggtggacttttgaaagggcatgattgtgtttcaaaatgtgaggacatgagatttgggaagggcca-ggagcagaaTGCCacggtttggctgggtccccatctaaatctcatcttgaattgc-aactcccacaatgcccatgtgtcctgggagggaccatgtgggaggtaattgaatcatgggagtgggtttttcccatgctgttcttgtgataatgagtaagtctcaggagatctggtggttttataatgggcagttcccctgcacagg----ctctcttgcctgccatcacgtaagatatgcctttgcttcttctttgccttctgccatgattgtgaggcctccccagccatgttgaactgtgtgtcaattaaagctctttcttttataaattgcccagtcttgggtacgtacttattaacagtgtgagaacagaccaatacaGcagatgacctacagaatgggagaaatattcagaaactatgcatccaacaaagtactaatattcacaatttataagaaacttacatcgacaagcaaaaaaccaataacctcattt-aaaaattatcaaagaacatgaacagacgttactcaaaagaaggcatacaaatagccaacaaacatatgaaaatatactaatcattactaatcatcagagaaatgcaaatcaaaaccataatgagatacaatctcatatcagtcagaatggcttttggttaaaaagtcaaaaaataacacctgctggtaggtccgtggagaaaagggaattctcgtacactgttagggggaatgtgaattagttcagtcactgtggaaagcaatttgcatatttctttaaaaacgaacagttgaagtacaacgtgacccagcaatcccattactggatag------atacccaaaggaaaatcgattgttccaccaaaaaaatacat---------gaactcatacattcattgcaacactagtcacaatagcaaagacatggagccaaaccaagtgcccatcaacagtggattggataaagaaaatgtggtacatatgcagcatgttatactacacagtcatgaagaagaaaaaaac--tattttttttgtggcagcatggatgcaaccagaggccattatccttagtgaactaaagcagaaacagaaaaccaaataccacatgttctcacttatgaatgggagttaaacgttgggtatacatggttataaagatggagataattgaggccagggaatataagagcagggagtgaaaaactgcatattcagtaggatgctgacttcctgggttgtgggttcaatcacactccaaacctgagcatcacacaatatacctttgtaaaaaaacctgcacatgtac-catggaatctaaaataaaacttgaaatttaaaaagaaaGGAATAAAAAATAAAAGGGGAAAAGAGGTAACAAAAAATAATAAGTGCCCTTATAGGAAACTAAGATCTGATTTTAAAAATTGTATTAGTTAAAAATCAAGATAATACAGTATACTGTTATTAAACTTCTTCTTT i saiBol1.JH378106 C 0 I 347 s cebCap1.NW_016107331v1 5481998 1645 + 12262279 gtacccccattgtatctatgaagtaagtaacttccttttagttttacaggctcataggcagaagaaacttgccttgtctcagattagactttggactgcagacttttgagtgaatgctgaaatgagttaagactttggtggacttttgaaagggcatgtttgtgtttcaaaatgtgaggacatgagatttgggaggggccagggggcagaatgacatggtttggctgggtccccatccaaatctcttcttgaattgtaaactcccataatgcccatgtatcctgggaggaatcatgtgggaggtaattgaatcatgggagtgggtttttcccatgctgttcttgtgataatgagtaagtctcaggaaatctggtggttttataatgggcagttcccctgcacggg----ctctcttccctgccaccatgaaagatatgcctttactt---ttttgctttctgccatgattgtgaggcctccccagccatgtggaactgtgagtcaattaaacgtctttcttttataaattgcccaggttcaggtatgtacttattaacagtgtgagaacagaccaatacaGcagacaacctacagagtgggagaaatattcagaaactatgtatccaacaaagtagtaatatccacaatttataagaaacttatatcaacaagcaaaaaaaaaaaaacc-cattt-aaaaattatcaaagaatatgaacagacattactaaaaagaaggcatataaatagccaacaaacatatgaaaatatactaatcattactaatcatcagagaaatgcaaatcaaaaccataatgagatacaacctcatatcaatcagaatggcttttggttaaaaagtcaaaaaataacagctgct-gtaggtctgtggaaaaaagggaattcttgtacactgttagggggaatgtgaattagttcagtcactgtggaaagcaatttgcagatttctttaaaaactaacagttgaagtacaacgtgacccaacaatcccattactggatat------atacccaaaggaaaatagattgctccaccaaaaa-atacat---------gcactcatacattcattgcaacactagtcacaatagcaaagacatggagccaaaccaagtgcccaccaacagtggattggataaagaaaatgtggtacatatgcaacatgttatactacacagtcataaagaagaacaagac--ta-tttttttgtggcagcatggatgcagccataggccattatccttagtgaactaaagcagaaacagaaaaccaaataccatatgttctcacatataaatgggagctaaacattgggtatacatggttataaagatggagataattgaggccaaggaatataagagcagcaactgaaaaactacttatttggtaggatgctgacttcctgggttgtgggatcaatcacactccaaacctgagcatcacatgatatatctttgt-aacaaacctgcacatgtac-catggaatcaaaaataatacttgaaaTTTAGAAAGAAAGGAATGAAAAATAAGAGAGGAAAAGAGGTAACAAAAAA---TAAGTGCCCTTATAGGAAACTAAGATCTGATTTTTAAAATTGCATTAGTAAAAAATCATGATAATACAGTATACTGCTATTAAACTTCTTT--- i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4172113 1646 + 15889662 atacccccattgtatctatgaagtaagtaacttccttttaattttacaggctcataggcagaagaatcttgccttgtctcaggttagactttggactgcagacttttgagtcaatgctgaaatgagttaagactttggtggacttttgaaagggcaagattgtgtttcaaaatgtgaggacatgagatgtgggagggacca-ggggcagaatgacatggtttggctgggtccccatccaaatctcatcttgaattgt-agctcccataatgcccatgtgtcctgagagggaccttgagggaggtaactgaatcatgggggtgggtttttcccatgctgttcttgtgatagtgagtaagtctcaggaaatctggtggttttataatgggcagttcccttgcacaag----ctctcttgcatgccaccatataagatacacctttgcttctcctttgccttctgccatgattgtaaggcctccccagccatatggaactgtgagtcaattaaacctctttcttttataaattgcccagtttcaggtacatacttattaacagtgtgagaacagaccaatacagcagacaacctacagaatgggagaaatattcagaaactatgcatccaaccaagtagtaacacccacaatttataagaaacttgaatcaacaagcaaaaaaccaataaccgcattt-aaaaaatataaaagaacatgaacagatactacccaaaataaggcatacaaatagccaacaaac--atgaaaatatactgatcatcactaatcatcagagaaatgcaaatcaaaaccataatgagatacaatctcatatcagtcagaatggcttttggttaaaaagtcaaaaaataacacctgctggtaggtctgtggagaaaaggaaattcttgtacactgttggggggaatgtgaattagttcagtcactgtggaaaacagtttgcagatttctttaaaaactgacagttgaagtacaacgtgacccagcaatcacattactggatat------atacccaaaggaaaatagattgttccaccaaaaagatacat---------gcactcatacattcattgcaacactagtcacaatagcaaagacatggaaccaaaccaagtgcccatcaacagtggattggataaagaaaatgtgagacatgtgtaacatgttgtactacacagtcata---aagaacaaaac--ta--ttttttgtggcagcctggatgcagccagaggccattatccttagtaaactaaagcagaaacagaaaaccaaataccatgtgttctcacttataaatgggagctaaaccttgagtatacatggttataaagatggagacaattgacgccagggaatataagaggagggactgaaaaactacttattcagtaggatgctgacttcctgggttgtgggttcagtcatactccaaacctgagcatcacatgatatatctttgt-aacaaacatgcacatgtac-catggaatctaaaataaaacttgaaatttaaaaagaaaGGAATGAAAAATAAGAGGGGAAAAGAGGTAACAAAAAATAATAAGTGCCCTTATAGGAAACTTAAATCTGATTTTAAAAATTGTATTAGTTAAAAATCATGATAATAGAGTATACTG---TTAAACTTCTTCTTT i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=302750.000000 s hg38.chr3_KI270784v1_alt 139859 66 + 184404 AAGTGTCATTTGGATCAGTGAATGAAGAATTATTAAATATTACTTTTAAAAATTCAATTATATATT s panTro5.chr3 34608 66 - 202621043 AAGTGTCATTTGGATCAGTGAATGAAGAATTATTAAATGTTACTTTTAAAAATTCAATTATACATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 27925 66 - 205426864 AAGTGTCATTTGGATCAGTGAATGAAGAATTATTAAATATTACTTTTAAAAATTCAATTATATATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 46387 66 + 508821 AAGTGTCATTTGGATCAGTGAATGAAGAATTATTAAATATTACTTTTAAAAATTCAATTATATATT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44698834 66 + 86207423 AAGTGTCATTTGGATCAGTGAATAAAGAATTATTAAATATTACTTTTAAAAATTCAATTATATACT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr6 81798714 66 + 180051392 AAGTGTCATTTGGATCAGTGGATGAAGAATTATTAAATATTACTTCTAAAAATTCAATTATATATT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17426041 62 - 20287406 AAGTGTCATTTGGATCAGTGAATGAAGAATTATTAAATA----TTCTAAAaattcaattatatatt i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79048672 66 + 91010382 AAGTGTCATTTGGATCAGTGAATGAAGAGTTATTAAATATTACTTCTAAAAAATCAACTATATATT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3451313 66 + 21726897 AAGTGTCATTTGGATCAGTGaatgaataattattaaatattacttctaaaaaatcaattatatatt i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81143740 64 - 204313951 AAGTCTGATTTAAATCAGTGAATGAAGaatta-taaatattacttt-aaaaaataaattatatatt i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107331v1 5483643 63 + 12262279 AAGTCTGATTTGGATCAGTGAATGAAGAATTA-TAAATACTACTTT--AAAAATGAATTATATATT i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4173759 60 + 15889662 AAGTCTGATTTGGATCAGTGAATGAAAAATTA-TAAATATTATTTT-AAAAAATGAATTATT---- i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16143290 347 - 71252344 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=1801503.000000 s hg38.chr3_KI270784v1_alt 139925 320 + 184404 TGAAATATATC--ATTATAATTTGAACTTACATTTAATATAAAAATAATTTCCAGATGGACACAACAGTTAACTGTAATCAAATAAAAATCAAATAACTCAAAGACAAATACCTGTTAAAATCTCATGGTGGAAAAATACTTAATAAATAAGAAAGTTTCAAGACATTTGCCCAGTAATGCCAATCTACATAAATTTTAAAAA----AACAAA-TACTTCTGAGTGAAGATATTTATAAAATTTTA-GAAGAATATAATTAaaa-taa-tgtaaatgcctaataatgaagaaatggctaaatatatagtacattaatatggtagaattgc s panTro5.chr3 34674 321 - 202621043 TGAAATATATT--GTTATAATTTGAACTTACATTTAATATAAAAATAATTTCCAGATGGACACAACAGTTAACTGTAATCAAATAAAAATCAAATAACTCAAAGACAAATACCTGTTAAAATCTCATGGTGGAAAAATATTTAATAAATAAGAAAGTTTCAAGACATTTGCCCAGTAATTCCAATCTACATAAATTTAAAAAA----AACAAA-TACTTCTGAGTGAAGATATTTATAAAATTTTA-GAAGAAAATAATTAAAAGTAA-TGTAAATGCCTAATAATGAAGAAATGGCTAAATATATAGTACATTAATATGGTAGAATTGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 27991 321 - 205426864 TGAAATATATT--GTTATAATTTGAACTTACATTTAATATAAAAATAATTTCCAGATGGACACAACAGTTAACTGTAATCAAATAAAAATCAAATAACTCAAAGACAAATACCTGTTAAAATCTCATGGTGGAAAAATATTTAATAAATAAGAAAGTTTCAAGACATTTGCCCAGTAATTCCAATCTACATAAATTTAAAAAA----AACAAA-TACTTCTGAGTGAAGATATTTATAAAATTTTA-GAAGAAAATAATTAAAAGTAA-TGTAAATGCCTAATAATGAAGAAATGGCTAAATATATAGTACATTAATATGGTAGAATTGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 46453 321 + 508821 TGAAATATATC--GTTATAATTTGAACTTACATTTAATATAAAAATAATTTCCAGATGGACACAACAGTTAACTGTAATCAAATAAAAATCAAATAACTCAAAGACAAATACCTGTTAAAATCCCATGGTGGAAAAATACTTAATAAATAAGAAAGTTTCAAGACATTTGCCCAGTAATTCCAATCTACATAAATTTTAAAAA----AACAAA-TACTTCTGAGTGAAGATATTTATAAAATTTTA-GAAGAAAATAATTAAAAGTAA-TGTAAATGCCTAATAATGAAGAAATGGCTAAATATATAGTACATTAATATGGTAGAATTGC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44698900 321 + 86207423 TGAAATATATC--ATTATAATTTGAACTTACATTTAATATAAAAATAATTTCCAGATGGACACAATAGTTAACTGTAATCAAATAAAAATCAAATAACTCAAAGACAAATACTTGTTAAAATCTCGTGGTGGAAAAATATTTAATAAATAAGAAAGTTTCAAGACATTTGCCCAGTAATTCCAATCTACATAAATTTTAAAAA----AACAAA-TACTTATGAGTGAAGATATTTATAATATTTTA-GAAGAAAATAATTAAAAGTAATTGTAAATGCCTAATAATGAAGAAATGGCTAAATATATAGTACATTACTATGG-AGAATTGC i nomLeu3.chr21 C 0 M 2379 s rheMac8.chr6 81798780 317 + 180051392 TGAAATATGTT--GTTATAATTTGAACTTACATTTAATAT-AAAATAATTTCCAGATGGACGAAACAGTTAACTATAATCAAATAAAAATCAAATAACTCAAAGACAAATACTTGGTAAAATCTCACAGTGGAAAAATATTTAATAAATTAGAAAGTTTGAAAATATCTGCCCAATAATTCCCACCTACATAAATTAAAAAAA-------AAA-TACTTCTGAGTGAAGATATTTATAAAATCTTA-GAAGAAAATAATGGAAAGTAA-TGTAAATCTCTAATAATGAAGAAAAGGCTAAATATATAGTACATTAATATGGTAGAATTGC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17426103 316 - 20287406 tgaaatatgtt--gttataatttgaacttacatttaatat-aaaataatttCCAGATGGACGAAACAGTTAACTATAATCAAATAAAAATCAAATAACTCAAAGACAAATACTTGGTAAAATCTCACAGTGGAAAAATATTTAATAAATTAGAAAGTTTGAAAATATCTGCCCAATAATTCCCACCTACATAAATT-TAAAAA-------AAA-TACTTCTGAGTGAAGATATTTATAAAATCTTA-GAAGAAAATAATGGAAAGTAA-TGTAAATCTCTAATAATGAAGAAAAGGCTAAATATATAGTACATTAATATGGTAGAATTGC i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79048738 324 + 91010382 TGAAATATGTT--GTTATAATTTGAACTTACATGTAACAT-AAAATAATTTCCAGATGGACAAAACAGTTAACTGTAATCAAATAAAAATCAAATAACTCAAAGACAAATACTTGGTAAAATCTCACAGTGGAAAAATATTTAATAAATTAGAAAGTTTGAAAATATCTGCCCAATAATTCTCACCTACATAAATTAAAAAAAAAAAAACAAA-TACTTCTGAGTGAAGAtatttataaaatctta-gaagaaaataattgaaagtaa-tgtaaatctctaataatgaagaaaaggctaaatatatagtacattaatatggtagaattga i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3451379 322 + 21726897 tgaaatatgtt--gttataattTGAACTTACATTTAATAT-AAAATAATTTCCAGATGGACAAAACAGTTAACTGTAATCAAATAAAAATCAAATAACTCAAAGACAAATACTTGGTAAAATCTCACGGTGGAAAAATATTTAATAAATTAGAAAGTTTGAAAATATCTGCCCAATAATTCCCACCTACATAAATTTAAAAAA--AAAACAAA-TACTTCTGAGTGAAGATATTTATAAAATCTTA-GAAGAAAACGGTTGAAAGTAA-TGTAAATCTCTAATAATGAAGAAAAGGCTAAATATATAGTACATTAATATGGTAGAATTGC i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81143804 315 - 204313951 tgtaatatatCAAGTTATAATGTGAACTTACATTTAATATAAAAATAATTTCCGGATTAACACAATAGCTAACTGTAATAA---AAAATTCAAATAATTCAAAGACAAATACTTGTTAAAATCTTATGGAGAG-AAATATTTAATAAATTAGACAGTTTGAAGATATTTGCTCAGTAATTCCAATCTATATAAAT----GAAA----AAAAAACTACTTCTGAGCGAATACACCTATAAAATTTta-gaa-aaagtaattgaaaataa-tgtaaatgcctaatactgaagaaaaggctaaatataaagaacattaatatgatagaattgg i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16143637 313 - 71252344 TGAAATATGTCAAGTTATAATGTGAACTTACatttaatataaaaataatttaCAGATCAACACAACAGTGAATTGTAATCAAATAAAAATCAAGTAATTCAAAGACAAATACTTGTTAAAATCTCATGGTGGGAAAATATTAAATAAATTAGAGAATTTGAAGATATTTACTCAGTAATTCCAATCTACATAAAT----GAAA-----------TACTACTGAATGAATATATTTATAAAATTTtaggaa-aaaataactgaaaataa-tgtaaatgcctaataataaagaaaaggctaaatataaagtaaattaatatgatagaactgg i saiBol1.JH378106 I 347 C 0 s cebCap1.NW_016107331v1 5483706 312 + 12262279 TGAAATATGTCAAGTTATAATGTGAACTTACATTTAATATAAAAATAATTTCCAGATCAACACAACAGTTAACTGTAATCAAGTAAAAATCAAATAACTCAAAGACAAATACTTGTTAAAATCTCATGGTGGGAAAATATTTAATAAATTAGACAATTTGAAGATATTTGCTCAGTAATTCCAATCTACATCAAT----GAAA-----------TACTTCTGAGTGAATATATTTATAAAATTTTA-GAA-AAAATAATTGATAATAA-TGTAAATGCCTAATAATGAAGAAAAGGCTAAATATAAAGTAAATTAATATGACAGAATTGT i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4173819 316 + 15889662 TGCAATATGTCAAGTTATAATGTGAACTTACATTTAATATAAAAATAATTTCCAGATTAACACAACAGTTAACTGTTATAAA--AAAATTCAAATAATTCAAAGACAAATACTTGTTAAAATCTTATGGAGGGAAAATATTTAATAAATTAGACAGTTTGAAGATATTTGCCCAGTAATTCCAATCTACATAAAT----GAAA----AAAAAA-AACTTCTGAGTGAATATATTTATAAAATTTCA-GAA-AAAATAATTGAAAATAA-TGTAAATGCCTAATAATGAAGAAAAGGCTAAATGTAAAGAACATTAATATGATAGAATTGG i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=817707.000000 s hg38.chr3_KI270784v1_alt 140245 165 + 184404 atcaaatgttatgtaaccattaaaatgtattttgaaaaatgttgagtgaACAAAAGTATCTTTCTCATAAAATTATAAATGAA-TTAATAAGAATT-AAATCCAATTATTCTGTATGCTCTCCATTTTTTGCAAACAAAATAATACAAGTATGTTTGGAAAAATATT s panTro5.chr3 34995 165 - 202621043 ATCAAATGTTATGTAACCATTAAAATGTATTTTGAAAAATGTTGAGTGAACAAAAGTATCTTTCTCATAAAATTATAAATGAA-TTAATAAGAATT-AAATCCAGTTATTCTGTATGCTCTCCATTTTTTGCAAACAAAATAATACAAGTATGTTTGGAAAAATATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 28312 165 - 205426864 ATCAAATGTTATGTAACCATTAAAATGTATTTTGAAAAATGTTGAGTGAACAAAAGTATCTTTCTCATAAAATTATAAATGAA-TTAATAAGAATT-AAATCCAGTTATTCTGTATGCTCTCCATTTTTTGCAAACAAAATAATACAAGTATGTTTGGAAAAATATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 46774 165 + 508821 ATCAAATGTTATGTAACCATTAAAATGTATTTTGAAAAATGTCGAGTGAACAAAAGTATCTTTCTCATAAAATTATAAATGAA-TTAATAAGAATT-AAATCCAATTATTCTGTATGCTCTCCATTTTTTGCAAACAAAATAATACAAGTGTGTTTGGAAAAATATT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81799097 163 + 180051392 CTCAAATGTTATGTAACCATTAAAATGTATTTTGAAAAATGTTGAGTGAACAAAAGCATCTTCCTTATAAAATTATAAATGAA-TTAA-AAAAATT-AAATCCAATTATTCTATAAGCTCTCCA-TTTTTGTAAACAAAATAATACAAGTATGTTTGGAAAAATATT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17426419 163 - 20287406 CTCAAATGTTATGTAACCATTAAAATGTATTTTGAAAAATGTTGAGTGAACAAAAGCATCTTCCTTataaaattataaatgaa-ttaa-aaaaatt-aaattcaattaTTCTATAAGCTCTCCA-TTTTTGTAAACAAAATAATACAAGTATGTTTGGAAAAATATT i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79049062 163 + 91010382 ctcaaatgttatgtaaccattaaaatgtattttgaaaaatgttaagtgaacaaaagcatcttccttataaaattataaatgaa-TTAA-AAAAATT-AAATCCAATTATTCTATGAGCTCTCCA-TTTTTGTAAACAAAATAATACAAGTATGTTTGGTAAAATATT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3451701 164 + 21726897 CTCAAATGTTATGTAACCATTAAAATGTATTTTGAAAAATGTTGAGTGAACAAAAGCATCTTCCTTATAAAATTATAAATGAATTTTA-AAAAATT-AAATCCAATTATTCTATATGCTCTCCA-TTTTTGTAAACAAAATAATACAAGTATGTTTGGAAAAATACT i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81144119 160 - 204313951 atgaaatattatgtaaccattaaaatgtattttgaaaaatgttgagtgaacaaaagcatctttctcatagaattataaatgaa-ttaatcagaatt-aaa-----ttattcggtatgctctccatttattacaaaccaaataACGCAAGTATGTTTGGAAAAatatt i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16143950 161 - 71252344 atcaaatattatgtaaccattaaaatacattttgaaaaatgttgagtgaatgaaagcatctttctcatagaattataaatgaa-ttaatcagaattaaaa-----ttattttttatgctCTCCATTTTTTACAAACAAAATAACATAAGTATGTCTGGAAAAATATT i saiBol1.JH378106 C 0 I 181 s cebCap1.NW_016107331v1 5484018 160 + 12262279 ATCAAATATTATGTAACCATTAAAATATATTTCAAAAAATGTTGAGTGAATGAAAGCATCTTTCTCATAGAATTATAAATGAA-TAAATCAGAATT-AAA-----TTATTCTGTATGCTCTCCAATTTTTAAAAACAAAATAATACAAGTATGTTTGGAAAAatatt i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4174135 160 + 15889662 ATCAAATATTATGTAACCATTAAAATGTATTTTGAAAAATCTTGAATGAAGAAAAGCATCTTTCTCATAGAATTATAAATGAC-TTAATCAGAATT-AAA-----TTATTCTGTATGCTCTCCATTTTTTACAAACAAAATAATACAAGTATGTTTGGAAAAatatt i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=4246.000000 s hg38.chr3_KI270784v1_alt 140410 1 + 184404 G s panTro5.chr3 35160 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 28477 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 46939 1 + 508821 G i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81799260 1 + 180051392 G i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17426582 1 - 20287406 G i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79049225 1 + 91010382 G i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3451865 1 + 21726897 G i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81144279 1 - 204313951 t i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16144292 1 - 71252344 g i saiBol1.JH378106 I 181 C 0 s cebCap1.NW_016107331v1 5484178 1 + 12262279 g i cebCap1.NW_016107331v1 C 0 I 119 s aotNan1.NW_018506370v1 4174295 1 + 15889662 g i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=27513.000000 s hg38.chr3_KI270784v1_alt 140411 6 + 184404 ATATAG s panTro5.chr3 35161 6 - 202621043 ATATAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 28478 6 - 205426864 ATATAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 46940 6 + 508821 ATATAG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81799261 6 + 180051392 ATATAG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17426583 6 - 20287406 ATATAG i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79049226 6 + 91010382 ATATAG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3451866 6 + 21726897 CTATAG i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81144280 6 - 204313951 gtgtat i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16144293 6 - 71252344 atatag i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5484298 6 + 12262279 atatag i cebCap1.NW_016107331v1 I 119 C 0 s aotNan1.NW_018506370v1 4174296 6 + 15889662 atatat i aotNan1.NW_018506370v1 C 0 I 97 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=31893.000000 s hg38.chr3_KI270784v1_alt 140417 11 + 184404 CTATATAAATA s panTro5.chr3 35167 11 - 202621043 CTATATAAATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 28484 11 - 205426864 CTATATAAATA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 46946 11 + 508821 CTATATAAATA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81799267 10 + 180051392 CTATATAAAT- i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17426589 10 - 20287406 CTATATAAAT- i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79049232 10 + 91010382 CTATATAAAT- i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3451872 10 + 21726897 CTACATAAAT- i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81144286 11 - 204313951 atatatatata i calJac3.chr2 C 0 I 620 s saiBol1.JH378106 16144299 11 - 71252344 atatataaata i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5484304 11 + 12262279 atatataaata i cebCap1.NW_016107331v1 C 0 C 0 e aotNan1.NW_018506370v1 4174302 97 + 15889662 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=14549.000000 s hg38.chr3_KI270784v1_alt 140428 8 + 184404 ACTACTTT s panTro5.chr3 35178 8 - 202621043 ACTACTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 28495 8 - 205426864 ACTACTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 46957 8 + 508821 ACTACTTT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81799277 6 + 180051392 --TACTTA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17426599 6 - 20287406 --TACTTA i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79049242 6 + 91010382 --TACTTA i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3451882 6 + 21726897 --TACTTA i colAng1.NW_012115488v1 C 0 C 0 s saiBol1.JH378106 16144310 7 - 71252344 ACTACTT- i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5484315 7 + 12262279 actactt- i cebCap1.NW_016107331v1 C 0 C 0 e aotNan1.NW_018506370v1 4174302 97 + 15889662 I e calJac3.chr2 81144297 620 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=3276.000000 s hg38.chr3_KI270784v1_alt 140436 1 + 184404 T s panTro5.chr3 35186 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 28503 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 46965 1 + 508821 T i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81799283 1 + 180051392 T i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17426605 1 - 20287406 T i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79049248 1 + 91010382 T i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3451888 1 + 21726897 T i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81144917 1 - 204313951 T i calJac3.chr2 I 620 C 0 e aotNan1.NW_018506370v1 4174302 97 + 15889662 I e cebCap1.NW_016107331v1 5484322 0 + 12262279 C e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16144317 0 - 71252344 C e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=1218211.000000 s hg38.chr3_KI270784v1_alt 140437 245 + 184404 TTGTCTTTATTTTATTCTGCAGTAAACATTTATTATTAATATACTCCTAATATGAAGTAACAGTTATATTTTAAATTTAAAATAAACAATAAAACTTTA-----CCAGTTTCAAATCcccttcatatctgtgggtttcacatccatctatttagccaaccacagataaaaaacattt-tttaaaaattgtgttcatacttaatatgtacagactttattccc---------ttacttaaacaatacatgataacaaatat s panTro5.chr3 35187 245 - 202621043 TTGTCTTTATTTTATTCTGCAGTAAACATTTATTATTAATATACTCCTAATATGAAGTAACGGTTATATTTTAAATTTAAAATAAACAATAAAACTTTA-----CCAGTTTCAAATCcccttcatatctgtgggtttcacatccatctatttagccaaccacagataaaaaacattt-tttaaaaattgagttcatacttaatatgtacagactttattccc---------ttacttaaacaatacatgataacaaatat i panTro5.chr3 C 0 C 0 s panPan2.chr3 28504 245 - 205426864 TTGTCTTTATTTTATTCTGCAGTAAACATTTATTATTAATATACTCCTAATATGAAGTAACGGTTATATTTTAAATTTAAAATAAACAATAAAACTTTA-----CCAGTTTCAAATCcccttcatatctgtgggtttcacatccatctatttagccaaccacagataaaaaacattt-tttaaaaattgtgttcatacttaatatgtacagactttattccc---------ttacttaaacaatacatgataacaaatat i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 46966 244 + 508821 TTGTCTTTATTTTATTCTGCAGTAAACATTTATTATTAATATACTCCTAATATGAAGTAATGGTTATATTTTAAATTTAAAATAAACAAT-AAACTTTA-----CCAGTTTCAAATCcccttcatatctgtgggtttcacacccatctatttagccaaccacagataaaaaacattt-tttaaaaattgtgttcatacttaatatgtacagactttattctc---------ttacttaaacaatacatgataacaaatat i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81799284 260 + 180051392 TTGTCTTTATTTTATTCTGCAATAAACATTTATTATTAATACACTCCTATTACGAAGTAACAGTTATATTTTAAATTTAAAATAAACAATAATACTTTAATTTATCAGTTTCAAATCcccttctcatctgtgggtttcacatccatgtgtttagccaaccacagataaaaaatatttagaaaaaaattgtgttcatacttaatatgtacagactttttttccttgccattattacttaaacaatataggataacaaatat i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17426606 260 - 20287406 TTGTCTTTATTTTATTCTGCAATAAACATTTATTATTAATACACACCTATTACGAAGTAACAGTTATATTTTAAATTTAAAATAAACAATAATACTTTAATTTTTCAGTTTCAAATCcccttctcatctgtgggtttcacatccatgtgtttagccaaccacagataaaaaatatttagaaaaaaattgtgttcatacttaatatgtacagactttttttccttgccattattacttaaacaatataggataacaaatat i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79049249 260 + 91010382 TTGTCTTTATTTTATTCTGCAATAAACATTTATTATTAATACACTCCTATTATGAAGTAACAGTTATATTTTAAATTTAAAATAAACAATAATACTTTAATTTATCAGTTTCAAATCcccttcacatctgtgggtttcacatccatgtgtttagccaaccacagataaaaaatatttagaaaaaaattgtgttcatacttaatatgtatagacttttttcccttgccattattacttaaacaatataggataacaaatat i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3451889 260 + 21726897 TTGTCTTTATTTTATTCTGCAATAAACATTTATTATTAATACACTCCTATTACGAAGTAACAGTTATATTTTAAATTTAAAATAAACAATAATACTTTAATTTATCAGTTTCAAATCcccttcacatctgtgggtttcacatccatgtatttagccaaccacagataaaaaatatttagaaaaaaattgtgttcatacttaatatatacagactttttttccttgccattattacttaaacaatataggataacaaatat i colAng1.NW_012115488v1 C 0 I 45 s calJac3.chr2 81144918 259 - 204313951 TTGTCTTTATTTTATTTTCCAATAAACATTTATTGTTAATATACTCCTAATATGATGTAATGGTTGTATTTTAAGTTTACAATAAACAATAAAACTTTAATTTATCAGTCTCAAATCcccttcatatctgagggtttcagatctatgcatttagccaaacaaagataaaaaatattt-agaacaatttgtgttcatacttagtatgtacagacatttttcccttcctgttattacttaaacaatacaggataacaaatat i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16144317 256 - 71252344 --GTCTTCATTATATTCTCCAATAAACATTTATTATTAATATAATTCTAATATGAAGTAATGGTTATATTTTCAGTTTAAAATAAACAATAAAACTTTAATTTATCAGTCTCAAATCcccttcatatctgaggttttcacatccatgcatttagccaaccacagataaaatacattt-agaaaaaattgtgttcatacatagtatgtatagacatttttcccttgctcctattacttaaacagtacaggataa-aaatat i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5484322 250 + 12262279 --gtctttattatattctccaataaacatttattattaatataCTTCAAATATGAAGTAATGGTTATATTTTAAGTTTAAAATAAACAATAAAAC-----TTTATCAGTCTCAAATCcccttcatatctgagggtttcacattcatgcatttagccaaccacagataatat-tattt-agaaaaaattgtgttcatacatagaatgtacagacatttttcccttgctgttattacttaaacaatacaggataa-aaatat i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4174399 254 + 15889662 TTGTCTTTATTTTATTCTCCAATAAACATTTATTATTAATATACTTCTAATATGAAGTAACAGTTATATTTTAAGTTTAAAATAAACAATAAAAC-----TTTATCAGTCTCAAATCcccttcatatctgagggtttcacatctatgcgtttagtcaaccacagataaaaaatattt-agaaaaaattgtattcatacttagtatgtacagacatttttcccttgctgttattacttaaacaatacaggatagcaaatat i aotNan1.NW_018506370v1 I 97 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=43956.000000 s hg38.chr3_KI270784v1_alt 140682 10 + 184404 ttacataaca s panTro5.chr3 35432 10 - 202621043 ttacataaca i panTro5.chr3 C 0 C 0 s panPan2.chr3 28749 10 - 205426864 ttacataaca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 47210 10 + 508821 ttacataaca i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81799544 10 + 180051392 ttacatagca i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17426866 10 - 20287406 ttacatagca i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79049509 10 + 91010382 ttacatagca i chlSab2.chr4 C 0 C 0 s calJac3.chr2 81145177 10 - 204313951 ttacataata i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16144573 10 - 71252344 ttacatagta i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5484572 10 + 12262279 ttacataata i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4174653 10 + 15889662 ttacataata i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3452149 45 + 21726897 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=4032946.000000 s hg38.chr3_KI270784v1_alt 140692 781 + 184404 ttttccttttactaggtattacaaatagtctagggatgatttaaagtgcacagaagtatgtgcataggttatatgtaaatgttacA------------------------------gggtttcagtgactctgggagcttctggaactgattcctacagatactgagggatgactgTACTACAATCCTATCCACCTCTATCTAGTGCATTAGAATGATTCTCTCTGGTAACACCCTGAGTGCAATCTACCTTATAATCTTTTAATGTTAATGTTTTACTTCCATTAAATTATAAGCTCATTATACTACTAGATATGTCATCTGAAGTTATGTTAATTTAAACATTTCTTTACAAAGTCTCAACATTCTATAGTAAGATTGGACAAGTCTGGCAGGACTATTTTACTACACACCTAATATTTTACTCTGTATTACAGCAGACAGCAATTTGTACccttccctcagtcttagaatctctggacaaaagtaacttatgagctaaatcccatgagctctagatcagtctccaactactgatactcattgagcacctgGATACTGACATTTACTCTCAATCATGAAGAGTCATTAATGAAAAATAAATATAGAAATGTCTTCAAATGTTCAACAAAGTTGAAATACGTGTAAGATTTAACAGATAGTTCATATCCTTAATAGACTATTGCTTTGCTATAGGAGGAGCAATAATCCTAGAACACAAAGTATTTATGATATGAAATGTAATATATGTTGGGATATTA-AAATCAAGACAGCAATATTAGTAGAGAAGATAGATCAAAATAAAAATCAAT s panTro5.chr3 35442 781 - 202621043 ttttccttttactaggtattacaaatagtctagggatgatttaaagtgcacagaagtatgtgcgtaggttatatgtaaatgttacA------------------------------GGGTTTCAGTGACTCTGGGAGCTTCTGGAACTGATTCCCACAGATACTGAGGGATGGCTGTACTACAATCCTATCCacctctatctagtgcattagaatgattctctctggtaacaccctgagtgcaatctaccttataatcttttaatgttaatgttttacttccattaaattataagctcattatactactagatatgtcatctgaagttatgttaatttAAACATTTCTTTACAAAGTCTCAACATTCTATAGTAAGATTGGACAAGTCTGGCAGGACGATTTTACCACACACCCAATATTTTACTCTGTATTACAGCAGACAGCAATTTGTACccttccctcagtcttggaatctctggacaaaagtaacttatgagctaaatcccatgagctctagatcagtctccaactactgatactcactgagcacctgGATACTGACATTTACTCTCAATAATGAAGAGTCATTAATGAAAAATAAATATAGAAATGTCTTCAAATGTTCAACAAAGTTGAAATACATGTAAGATTTAACAGATAGTTCATATCCTTAATAGACTATTGCTTTGCTATAGGAGGAGCAATAATCCTAGAACACAAAGTATTTATGACATGAAATGTAATATATGTTGGGATATTA-AAATCAAGACAGCAATATTAGTAGAGAAGATAGATCAAAATAAAAATCAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 28759 781 - 205426864 ttttccttttactaggtattacaaatagtctagggatgatttaaagtgcacagaagtatgtgcataggttatatgtaaatgttacA------------------------------GGGTTTCAGTGACTCTGGGAGCTTCTGGAACTGATTCCTACAGATACTGAGGGATGGCTGTACTACAATCCTATCCacctctatctagtgcattagaatgattctgtctggtaacaccctgagtgcaatctaccttataatcttttaatgttaatgttttacttccattaaattataagctcattatactactagatatgtcatctgaagttatgttaatttaaacatttctttacaaagtctcaacattctatagtaagattggacaagtctggcaggacgattttactacacacccaatattttactctgtattacagcagacagcaatttgtacccttccctcagtcttggaatctctggacaaaagtaacttatgagctaaatcccatgagctctagatcagtctccaactactgatactcactgagcacctgGATACTGACATTTACTCTCAATAGTGAAGAGTCATTAATGAAAAATAAATATAGAAATGTCTTCAAATGTTCAACAAAGTTGAAATACATGTAAGATTTAACAGATAGTTCATATCCTTAATAGACTATTGCTTTGCTATAGGAGGAGCAATAATCCTACAACACAAAGTATTTATGATATGAAATGTAATATATGTTGGGATATTA-AAATCAAGACAGCAATATTAGTAGAGAAGATAGATCAAAATAAAAATCAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 47220 774 + 508821 ttttcattttactaggtattacaaatagtctagggatgatttaaagtgcacagaagtatgtgcataggttatatgtaaatgttacA------------------------------GGGTTTCAGTGA--CTGGGAGCTTCTGGAACTGATTCCTACAGATACTGAGGGATGGCTGTACTACAATCCTATCCacctctatctagtgcattagaatgattctctctggtaacaccctgagtgcaatctaccttataatcttttaatgttaatgttttacttccattaaattataagctcattatactactagatatgtcatctgaagttatgttaatttAAACATTTCTTTACAAAGTCTCAACATTCTATAGTAA-----GACAAGTCTGGCAGGACGATTTTACTACACACCCAATATTTTACTCCGTATTACAGCAGACAGCAATTTGTACccttccctcagtcttggaatctctggacaaaagtaacttatgagctaaatcccatgagctctagatcagtccccaaccactgatactcattgagcacctgGATACTGACATTCACTCTCAATAATGAAGAGTCATTAATGAAAAATAAATATAGAAATGTCTTCAAATGTTCAACAAAGTTAAAATACATGTAAGATTTAACAGATAGTTCATATCCTTAATAGACTATTGCTTTGCTATAGGAGGAGCAATAATCCTAGAACACAAAGTATTTATTATATGAAATGTAATATATGTTGGGATATTA-AAATCAAGACAGCAATATTAGTAGAGAAGATAGATCAAAATAAAAATCAAT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81799554 811 + 180051392 ttttcattttactaggtattataagtagtctagggatgattaaaagtgcacaaaagtatgtgcatagtttatatgtatatattacattattttatgttagagacttgagcatccatgacttttggtatctctgggagcttctggaactgattcccacagatactgagggatgactgTACTACAATCCtatctacctctatctactgcattaacacgttactctctggtagcaccctgagtacattctaccttataacattttaatgttaatgttttacttccattaaatgataagctcattatagtactagatatgtcatctgaagttatgtcaatttaaacacttctttataaagtcccaacattctatagaaagattggataagtctggcagaacgatttcactatacacccaatgtttcactctgtattacagtagagggcaatttgtacccttccctgagtcttggactctctggacaaaagttacttatgaactaaatcccatgggctccagatcagtctccaactattgatactcatTGAGCAACTGGATACTGACATTTACTCTCAATAATGAAGAGTCATTAATGAAAAATAAATATAGAAATGTATTCAAATGTTAAACAAAGTTGAAATACATATAAGATTTGACAGATAGTTCATATCCTTAATATATTATTGCTTTACTATAGGAGAAGCAATAATCCTGGAACACAAAGTATTGTTGATATGAAATGTAATATACGTTGGGATATTA-AAGTCAAGACAGCAATATTAGTAGAGAAGATAGATCAAAATAAAAATCAAT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17426876 811 - 20287406 ttttcattttactaggtattataagtagtctagggatgattaaaagtgcacaaaagtatgtgcatagtttatatgtatatattacattattttatgttagagacttgagcatccatgacttttggtatctctgggagcttctggaactgattcccacagatactgagggatgactgTACTACAATCCtatctacctctatctactgcattaacacgttactctctggtagcaccctgagtacattctaccttataacattttaatgttaatgttttacttccattaaatgataagctcattatagtactagatatgtcatctgaagttatgtcaatttaaacacttctttataaagtcccaacattctatagaaagattggataagtctggcagaacgatttcactatacacccaatgtttcactctgtattacagtagagggcaatttgtacccttccctgagtcttggactctctggacaaaagttacttatgaactaaatcccatgggctccagatcagtctccaactattgatactcatTGAGCAACTGGATACTGACATTTACTCTCAATAATGAAGAGTCATTAATGAAAAATAAATATAGAAATGTATTCAAATGTTAAACAAAGTTGAAATACATATAAGATTTGACAGATAGTTCATATCCTTAATATATTATTGCTTTACTATAGGAGAAGCAATAATCCTGGAACACAAAGTATTGTTGATATGAAATGTAATATACGTTGGGATATTA-AAGTCAAGACAGCAATATTAGTAGAGAAGATAGATCAAAATAAAAATCAAT i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79049519 811 + 91010382 ttttcattttactaggtattataagtagtctagggatgattaaaagtgcatgaaagtatgtgcatagtttatatgtatatattacattattttatgttagagacttgagcatccatgacttttggtatctctgggagcttctggaactgattcccacagatactgagggatgactgTACTACAATCCtatctacctctatctagtgcattaacacgtttctctctggtagcaccctcagtacaatctaccttataacattttaatgttaatgttttacttccattaaatgataagctcattatagtactagatatgtcatctgaagttatgtcaatttaaacacttctttataaagtcccaacattctatagaaagattggataagtctggcagaacaatttcactatacacccaatgtttcactctgtattacagtagagggcaatttgtacccttccctaagtcttggaatctctggacaaaagttacttatgaactaaatcccatgggctccagatcagtctccaactattgatactcattgagaacctgGATACTGACATTTACTCTCAATAATGAAGAGTCATTAATGAAAAATAAATATAGAAATGTATTCAAATGTTAAACAAAGTTGAAATACATATAAGATTTGACAGATAGTTCATATCCTTAATATACTATTGCTTTACTATAGGAGAAACAATAATCCTGGAACACAAAGTATTGTTGATATGAAATGTAATATATGTTGGGATATTA-AAGTCAAGACAGCAATATTAGTAGAGAAGATAGatcaaaataaaaatcaat i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3452194 807 + 21726897 ttttcattttactaggtattttaagtagtctagggatgattaaaagtgcacgaaagtatgtgcatagtttatatgtatatattacattattttatgttagagacttgagcatccatgacttttggtatctctgggagcttctggaggtgattcccacagatactgagggatgactgTGCTACAATCCtatctacctctatctagtgcattaacatgtttctctctggtagcaccctgaatacaatctaccttataacattttaatgttaatgttttacttccattaaatgataagctcattatagtgctagatatgtcatctgaagttatgtcaatttaaacacttctttataaagtcctaacattctatagaaagattggataagtctggcagaatgatttcactatacacccgatgtttcactctgtattacagtagagggcaatttgtacccttccctgagtcttggaatctctagaaaaaagttacttatgaactaaatcccatgggctccagatcagtctccaactattgatactcattgagcacctgGATACTGACATTTACTCTCAATAATGAAGAGTCATTAATGAAAAATAAATATAGAAATGTATTCAAATGTT----AAAGTTGAAATACATATAAGATTTGACAGATAGTTCGTATCCTTAATATGCTATTGCTTTACTATAGGAGAAGCAATAATCCTGGAACACAAAGTATTGTTGATATGAAATGTAATATATGTTGGGATATTA-AAGTCAAGACAGCAATATTAGTAGAGAAGATAGATCaaaataaaaattaat i colAng1.NW_012115488v1 I 45 C 0 s calJac3.chr2 81145187 798 - 204313951 ttttcttttaactaggtatt-tatatagtctaggaatgagttaatgtgcacaagagtatgtgcatagcttatatgtaaatattacattattttatattagagacttgagcattggtgggttttgttatctttgggagcttctggagctgatttccacagatactgagggatgactgTACTGTAATcctatccatctctatctagtacattagaatgcttctctccggtagcaccctgaacgtaatctaccttataacattttaatgttaatgttttacttacattacattataaacttattatagtactacatatgtcatctgaagttatgtcaatttaaatatttctttataaagtcccaacattctataggaatattggacaagactgacagaatgatttcatg-tacacccaatattttactctgtattacagtagaaagcaatttgtacccttccctcagtctttgaatctctggacaaaagtttcttatgaactaaatcctgtgagctcaatatcagtctccaactattgatactcattgagtacctggatACTGACATTTACTCTCAATAATGAAGAGTCATTAAAGAAAAATAAATATAGAAATGTCTTCAAATGTTAAACATGGTGAAAATACATGTAAGATTTGACATATAGTTCATATCCTTAATATATTATTTCTT-----TAGGAGAAGCAATAATCCTGGAACAAAAAGTATTTATGATATGAAATGTAATATATGTTAGGATATTAGAAATCAAGACAGGAGTAT---TAGGGAAGATAGATCAAAATAAA----AAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16144583 809 - 71252344 gtttcattttactgggtattataaatagtttagggatgagttaaagtgcacaaaggtatgtgcataggttatatgtaaatattacattattttatattagacatttgagcatcagtgtgttttgttatctttggtagcttctggagctgattcccacagatactgagggctgactgTACTGCAATCCTATCCATCTCTATCTAGTACATTAGAataattctctctggtagcaccctgaatgtaatctaacttataacattttaatgttaatgttttacttccattacattataaacttattatagtactagatatttcatctgaagttatgtcaatttaaatatttctttatgaaatcccaacattctataggaatatcggacaaatctggcagaatgatttcatgatacacccaatattttactttatattacagtacagagcaatttgtacccttccctcagtctatgaatctctggacaaaagtttcttatgaactaaatcctatgagctcaatatcagtctccaactattgatactcattgagtacctgGATACTGACATTTACTCTCAATAATGAAGAGTCGTTAAGAAAAAATAAATATAGAAATATCTTCAAATGTTAAACAAAGTTAAAATACATGTAAGATTTGATATATAGTTCATATCCTTAATATACTATTTCTTTACTATAGGAGAAGCAATAATCCTGGAACAAAAAGTGTTTATGATATGAAATGTAATACATGTTAGGATATTAAAAATCAGGACAGTAGTAT---CAGAGAAGATATATAAAAATAAAAATCAAT i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5484582 802 + 12262279 ttttcattttactgggtattataaatagtctagggatgagttaaagtgcacaaaggtatgtgcataggttatatgtaaatattacgttattttatactagaaatttgagcatcggtgggttttgttatctttgggagcttctagagctgattcccacagatactgagggatgactgTACTGCAATCCTATCCATCTCTATCTAGTACATTAGAATAATTTTCtctggtagcaccctgaatgtaatctaacttataacattttaatgttaatgatttacttccattacattataaacttattatagtactagatatttcacctgaagttatgtcaatttaaatatttctttataaaGTCCCAACATTCTATAGGAATATTGGATAAGTCTGGCAGAATGATTTCATGATACACCCAATATTTTACTTTGTATTACAGTAGAGAGCAA-TTGTACccttccctcagtctttgaatctctggacaaaagtttcttatgaactaaatcctgtgagctcaatagcagtctccaacaattgatattcattgagtacctgGATACTGACATTTACTCTCAATAATGAAGAGTCATTAAGGAAAAATAAATATAGAAATATCTTCAAATGTTAAACAAAGTTAAAATACACATAAGATTTGACATATAGTTCATACCCTTAATACAGTATTTCTTTACTATAGGAGAAGTAATAATCCTGGAACAAAAATTG-TTATGATATGA-----CATATATGTTAGGATATTAAAAATCAAGACAGTAGTAT---TAGAGAAGATAGATCAACATAAAAATCAAT i cebCap1.NW_016107331v1 C 0 I 3726 s aotNan1.NW_018506370v1 4174663 801 + 15889662 ttttcttttaactaggtattataaatagtctagggatgagttaaggtgcacaaaagtatgtgcataggatatatgtaaatattacgttattttatattagagacttgagcatcagtgggttttgttatctttgggagcttctggagctgattcccgcagatactgagggatgactgTACTGCAATCCTATCCATCTCTATCTAGTACATTAGAatgattctgtctggtagcaccctgaatgtaatctaccttataacattttaatgttaatgttttccttacattatgttataaac---ttatagtactagatatgtcatctgaagttatgacaatttaaatatttctttataaaGTCCCAACATTCTATAGGAATATTGGACAAGTCTGGCAGAATGATTTCGTGGTACGCCCAATATTTTACTCTGTATTACAGTAGAAAGCAATTTGTACccttccctcagtccttgaatctctggacaaaagtttcttatgaactaaatcctgtgagctcaatatcagtctccaactattgatactcattgagtacctgGATACTGACATTTACTCTCAATAATGAAGAGTCATTAAGGACAAATAAATATAGAAATGTCTTCAAATGTTAAACAAAGTTAAAATACATGTAAGATTTGACATATAGTTCATATCCTTAATATACTATTTCTT-----TAGGAGAAGCAATAATCCTGGAACAAAAAGTATTtatgatatgaaatgtaatatatgttaggatatTAAAAATCAAGACAGTAGTAT---TAGAGAAGATAGATCAAAATAAAAATCAAT i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=204504.000000 s hg38.chr3_KI270784v1_alt 141473 62 + 184404 GACATAGCACATAGGT-ACTAAATATAAAAATATGCCTAATTTAGGTTAT-TTAA-----Aaaataatg s panTro5.chr3 36223 67 - 202621043 GACATAGCACATAGGT-ACTAAATATAAAAATATGCCTAATTTAGGTTAT-TTAAGTGTCAAAATAATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 29540 67 - 205426864 GACATAGCACATAGGT-ACTAAATATAAAAATATGCCTAATTTAGGTTAT-TTAAGTGTCAAAATAATG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 47994 62 + 508821 GACATAGCACATAGGT-ACTAAAAATAAAAATATGCCTAATTTAGGTTAT-TTAA-----AAAATAATG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81800365 61 + 180051392 AACATAGCACATAGGT-AATAAATATAAAAA-ATGCCTGATTTAGGTTCC-TTTA-----AAAATCATG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17427687 62 - 20287406 AACATAGCACATAGGT-AATAAATATAAAAATATGCCTGATTTAGGTTAC-TTTA-----AAAATCATG i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79050330 62 + 91010382 aacatagcacataggt-aataaatataaaaataTGCCTAATTTAGGTTAT-TTTA-----AAAATCGTG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3453001 62 + 21726897 aacatagcacataggt-aataaatataaaaacataCCTAATTTAGGTTAT-TTTA-----AAAACCATG i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81145985 61 - 204313951 AACATAGCGCATAGGC-AATACATTTAACA--ATGCCTAATTTAGGTTATATTAA-----AAAATCATG i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16145392 57 - 71252344 AACATAACACATAGGTAAAAATATTTAAAA--ATCCCTAAT-----TTATTTTTA-----AAAATCACA i saiBol1.JH378106 C 0 C 0 s aotNan1.NW_018506370v1 4175464 61 + 15889662 AACATAGCACATAGGT-AATAAATTAAAAA--ATGCCTAATTTAGGTTATTTTAA-----AAAATCATG i aotNan1.NW_018506370v1 C 0 C 0 e cebCap1.NW_016107331v1 5485384 3726 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=1301743.000000 s hg38.chr3_KI270784v1_alt 141535 273 + 184404 tactttcaaataagaaagagtgaagtatgataacatgaaaatatacactatgCTTAAGCAGTGCTCAAATCAAACATGTAAGAAGAGTCTTCAAATATTTGCTAATTCCAATATGAGAAGGCTTTCATGGAATCTAATTTGGAAAAGATTAAGAAAATTCATTATTTAAGTTTAAATAAAAAGAATATATATCTGAACCAAAATATCATAGAGCAAAGAAAGGGGGTCA-GAAAAATAGAATAAACCTTACTTTAGATATTTAAG-GGTTTTTTT- s panTro5.chr3 36290 272 - 202621043 TACTTTCAAATAAGAAAGAGTGAAGTATGATAACATGAAGATATATATTATGCTTAAGCAGTGCTCAAATCAAACATGTAAGAAGAGTCTTCAAATATTTGCTAATTCCAATATGAGAAGGCTTTCATGAAATCTAAATTGGAAAAGATTAAGAAAATTCATTATTTAAGTTTAAATAAAAAGAATATATAACTGAACCAAAATATCATAGAGCAAAGAAAGGGGGTCA-GAAAAATAGAATAAACCTTACTTTAGATATTTAAG-GG-TTTTTT- i panTro5.chr3 C 0 C 0 s panPan2.chr3 29607 272 - 205426864 TACTTTCAAATAAGAAAGAGTGAAGTATGATAACATGAAGATATATACTATGCTTAAGCAGTGCTCAAATCAAACATGTAAGAAGAGTCTTCAAATATTTGCTAATTCCAATATGAGAAGGCTTTCATGGAATCTAAATTGGAAAAGATTAAGAAAATTCATTATTTAAGTTTAAATAAAAAGAATATATAACTGAACCAAAATATCATAGAGCAAAGAAAGGGGGTCA-GAAAAATAGAATAAACCTTACTTTAGATATTTAAG-GG-TTTTTT- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 48056 272 + 508821 TACCTTCAAATAAGAAAGACTGAAGTATGATAACATGAAGATATATACTATGCTTAAGCAGTGCTCAAATCAAACATGTAAGAAGAGTCTTCAAATATTTGCTAATTCCAATATGAGAAGGCTTTCATGGAATCTAATTTGGAAAAGATTAAGAAAATTCATTATTTAAGTTTAAATAAAAAGAATATATAACTGAACCAAAATATCATAGAGCAAAGAAAGGGGGTCA-GAAAAATAGAATAAACCTTACTTTAGATATTTAAG-GG-TTTTTT- i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81800426 272 + 180051392 TACTTGCAGATAAGAAAGAGTGAAGTATGATAACATGAAAATATATTCTATGCTTAAGCAGCGCTCAAATCAAACATGTAAGAAGGGTCTTCAAATATTTTCTAATTCCAATATGAGAAGGGTTTCATGGAATCTAATTTGGAAAAGATTGAGAAAGTGAATTATTTAATTTTAAATAAAAAGAATATGTAACTGAACCAAAATATCATAGAGCAAAGAAAGGGGGTCA-GAAAAATAGGATAAACTTAACTTTAGATATTTACG-TT-TTTTTC- i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17427749 272 - 20287406 TACTTGCAGATAAGAAAGAGTGAAGTATGATAACATGAAAATATATTCTATGCTTAAGCAGCGCTCAAATCAAACATGTAAGAAGAGTCTTCAAATATTTTCTAATTCCAATATGAGAAGGGTTTCATGGAATCTAATTTGGAAAAGATTGAGAAAGTGAATTATTTAATTTTAAATAAAAAGAATATGTAACTGAACCAAAATATCATAGAGCAAAGAAAGGGGGTCA-GAAAAATAGGATAAACTTAACTTTAGATATTTATG-TT-TTTTTC- i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79050392 267 + 91010382 TACTTGCAGATAAGAAAGAGTGAAGTATGATAACATGAAAATATATTCTATGCTTAAGAAGTGCTCAAATCAAACATGTAAGAAGAGTCTCCAAATATTTTCTAATTCCAATATGAGAAGGCTTTCATGGAATCTAATTTGGAAAAGATTGAGAAAGTTAATTATTTAATTTTAAATAAAAAGAATATGTAACGGAACCAAAATATCATAGAGCAAAGAAAGGGGGTCA-GAAAAATAGGATA-----AACTTTAGATATTTAAG-TT-TTTTTC- i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3453063 272 + 21726897 TACTTGCAGATAAGAAAGAGTGAAGTATGATAACATGAAAATATATTCTATGCTTAAGCAGCGCTAAAATCAAACATGTTAGAAGAGTCTTCAAATATTTTCTAATTCTAATATGAGAAGGCTTTCATGGAATCTAATTTGG-AAAGATTGAGAAAGTTAATTATTTAATTTTAAATAGAAAGAATATATAACTGAACCAAAATATCAAAGAGCAAAGAAAGGGGGTCA-GAAAAATAGGATAAACTTTACTTTAGATGTTTAAGTTT-TTTTTC- i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81146046 266 - 204313951 TACTTTCAGATTAGAAAAAGTGAAGTATGATAACATAAAA------TATATGCTTAAGCAGTGCTCACATCAAACATGTA--AAGAGTCTTCAAATATTTGCTAATTCCAGTATGAGAAGGCTTTCATGGAATTAAATTTGGAAAAGATTGAGAAAACTAATTATTTAAGTTTAAATAAAAAGAATATATAACTGGACCAAAATATCACAGAGCAATGAAAGGGGGTCATAAAAAATAGGATAAATATTACTTTAGATATTTAAG-GT-ATTTTTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16145449 252 - 71252344 TACTTTCAGATTAGAAAGAGTGAAGTATGATAACATAAAA------TATATCCTCAA-----------ATCAAACATGCA--AAGAGTCTTCAAATATTTGCTAATTCCAATATGAGAAGGCTTTCATGGAATCAAATTTGGAAAACATTGAGAAAACTAA-TATTTAAATGTAAATGAAAAGAATATATAACTGGACCAAAATATCATAGAGCAAAGAAAGTGGGTC--AGAAAATAGGATAAACATTACTTTAGATATTTAAG-Gt-ttttttt i saiBol1.JH378106 C 0 I 379 s cebCap1.NW_016107331v1 5489110 265 + 12262279 TACTTTCAGATTAGAAAGAGTGAAGTATGATAACATAAAA------TATATGCTTAAGCAGTGCTCAAATCAAATATGTA--AAGAGTCTTCAAATATTTGCTAATTCCAATATGAGAAGGCTTTCATGGAATCAGATTTGGAAAAGATTGAGAAAACTAATTATTTAAGTTTAAATGAAAAGAATATATAACTGGACCAAAATATCATAAAGCAAATAAAGGGGGTCA-GAAAAATAGGATAAACATTACTTTAGATATTTAAG-GT-ATTTTTA i cebCap1.NW_016107331v1 I 3726 C 0 s aotNan1.NW_018506370v1 4175525 257 + 15889662 TACTTTCAGATTAGAAAGAGTGAAGTATGATAAC-------------ATACGCTTAAGCAGTGCTCAAATCAAACATGTA--AAGAGTC-TCAAATATTTGCTAATTCCAGTATGAGAAGTCTTTCATGGAATCAAATTTGGAAAAGGTTGAGAAAACTAATTATTTAAGTTTAAATGAAAAGAATATATAACTTGACCAAAATATCACAGAGCAAAGAAAGGGGGTCA-GAAAAATAGGATAAACATTACTTTAGATATTTAAG-GT-ACTTTTT i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=145628.000000 s hg38.chr3_KI270784v1_alt 141808 47 + 184404 ATGAGTCACTTGAAAATTAGTATCTAG---attattattattattattat- s panTro5.chr3 36562 43 - 202621043 ATGAGTCACTTGAAAattagtatctat---attattattattatca----- i panTro5.chr3 C 0 C 0 s panPan2.chr3 29879 43 - 205426864 ATGAGTCACTTGAAAattagtatctat---attattattattatca----- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 48328 43 + 508821 ATTAGTCACTTGAAAattagtatctat---attattattattatca----- i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81800698 43 + 180051392 ATGAGTCACTTGAAAATTAGTATCTAG---attattattattatta----- i rheMac8.chr6 C 0 I 5 s macNem1.NW_012016021v1 17428021 43 - 20287406 ATGAGTCACTTGAAAATTAGTATCTAG---attattattattatta----- i macNem1.NW_012016021v1 C 0 I 2 s chlSab2.chr4 79050659 43 + 91010382 ATGAGTCACTTAAAAATTGGTATCTAG---attattattattatta----- i chlSab2.chr4 C 0 I 8 s colAng1.NW_012115488v1 3453335 43 + 21726897 ATGAGTCACATGAAAattagtatctag---attatttttattatta----- i colAng1.NW_012115488v1 C 0 I 9 s calJac3.chr2 81146312 47 - 204313951 ATGATTCATTTTAAAATTAGTGTTTAgattatgatgatgatgatga----t i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16146080 44 - 71252344 ATGATTCATTTTAAAATTAGTGTTTAG---ATGATGATGATGATAA----T i saiBol1.JH378106 I 379 C 0 s cebCap1.NW_016107331v1 5489375 35 + 12262279 ATGACTCATTTTAAAATTAGTGTTTAG------------ATGATAA----T i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4175782 44 + 15889662 ATGATTCTTTTTAAAATTAGTGTTTAG---ATGATGCTGATGACAA----T i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=48578.000000 s hg38.chr3_KI270784v1_alt 141855 17 + 184404 cattattatta---tGTAGC s panTro5.chr3 36605 16 - 202621043 -attattatta---tGTAGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 29922 16 - 205426864 -attattatta---tGTAGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 48371 16 + 508821 -attattatta---tGTAGC i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81800746 19 + 180051392 tattattatta-ttTTTAAC i rheMac8.chr6 I 5 C 0 s macNem1.NW_012016021v1 17428066 19 - 20287406 tattattatta-ttTTTAAC i macNem1.NW_012016021v1 I 2 C 0 s chlSab2.chr4 79050710 20 + 91010382 tattattattattTTTTAAC i chlSab2.chr4 I 8 C 0 s calJac3.chr2 81146359 17 - 204313951 gatgatTATTG---TTTAAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16146124 17 - 71252344 GATTATCATTT---TTTAAC i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5489410 17 + 12262279 AATTATTATTG---TTTAAC i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4175826 17 + 15889662 GACTATTATTG---TTTAAC i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3453378 9 + 21726897 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=638114.000000 s hg38.chr3_KI270784v1_alt 141872 123 + 184404 TTCAAAGTTTTCCCCACAAACTATTGGGTTGTCATTGTTTACTTAAGAGTCTTAGGCAAACATAAATTTTCAAAGATCCAGTTTCTTCTTCTATGATAATCttcctcagccttgatacattga s panTro5.chr3 36621 123 - 202621043 TTCAAAGTTTTCCCCACAAACTATTGGGTTGTCATTGTTTACTTAAGAGTCTTAGGCAAACATAAATTTTCAAAGATCCAGTTTCTTCTTCTATGATAATCttcctcagccttgatacattga i panTro5.chr3 C 0 C 0 s panPan2.chr3 29938 123 - 205426864 TTCAAAGTTTTCCCCACAAACTATTGGGTTGTCATTGTTTACTTAAGAGTCTTAGGCAAACATAAATTTTCAAAGATCCAGTTTCTTCTTCTATGATAATCttcctcagccttgatacattga i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 48387 123 + 508821 TTCAAAGTTTTCCCCACAAACTATTGGGTTGTCATTGTTTACTTAAGAGTCTTAGGCAAATGTAAATTTTCAAAGATCCAGTTTCTTCTTCTATGATAATCttcctcagccttgatacattga i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81800765 123 + 180051392 CCCAAAGTTTTCCCCACAAACTATTAAGTTGTCTTTGTTTGCTTAATAGTCTGAGGCAAAGATAAATTTTCAAAGATTCAGTTTCTTCTTCAATAATAATCtttgtcagtcttcatacattga i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17428085 123 - 20287406 CCCAAAGTTTTCCCCACAAACTATTAAGTTGTCTTTGTTTGCTTAATAGTCTGAGGCAAAGATAAATTTTCAAAGATTCAGTTTCTTCTTCAATAATAATCtttctcagttttcatacattga i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79050730 123 + 91010382 CCCAAAGTTTTCCCCACAAGCTATTAAGTTATCTTTGTTTGCTTAATAGTCTGAGGCAAAGATAAATTTTCAAAGATTCTGTTTCTTCTTCTATAATAATCtttctcagtcttcatacattga i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3453387 123 + 21726897 CCCAAAGTTTTCCCCACAAACTATTAAGTTGTCTTTGTTTGTGTAATAGTCTTAGGCAAAGATAAATTTTCAAAGATTCAGTTTCTTCTTCTATAATAATCtttctcagtcttcatacattga i colAng1.NW_012115488v1 I 9 C 0 s calJac3.chr2 81146376 123 - 204313951 CTCAAAGTTTTTCCCACAAACTATTAGGTTGTCATTGTTTGCTTAATAGTCTTAGGCAAAGATAAACTTTCAAAGGTTCAGTGTCTTCATCTATAATAATCttcctcagccttgatacattga i calJac3.chr2 C 0 I 1 s saiBol1.JH378106 16146141 123 - 71252344 CTCAATGTTTTCCCCACAAACTATTAGGTTGTCATTGTTTGCTTAATAGCCTTTGGCAAAGATAAAATTTCAAAGGTTCAGTGTCTTTTTCTGTAATGATCttcctcagccttgatacattga i saiBol1.JH378106 C 0 I 1 s cebCap1.NW_016107331v1 5489427 123 + 12262279 CTCAAAGTTTTCCCCACAAACTATTAGGTTGTCATTGTTTGCTTAATAGTCTTTGGCAAAGATAAAATCTCAAAGGTTCAGTGTCTTCTTCTATAATAATCttcctcagccttgatacattga i cebCap1.NW_016107331v1 C 0 I 175 s aotNan1.NW_018506370v1 4175843 123 + 15889662 CTCAAAGTTTTCCCCACAAATTATTAGGTTGTCATTGTTTGCTTAATAGTCTTAGGCAAAGATAAACTTTCAAAGGTTCAGTGTCTTCTTCTATAATAATCttcctcagccttgatacattga i aotNan1.NW_018506370v1 C 0 I 1 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=466081.000000 s hg38.chr3_KI270784v1_alt 141995 124 + 184404 ga-tctggcctggacattt-ctttgctcccagacgttgtccca-ttttttgtttatctgcgtctcgggtctttacccactagatgccactgtctcctaccccatcgtcgtgacaaccaaaaatgtcc s panTro5.chr3 36744 124 - 202621043 ga-tctggtctggacattt-ctttgctcccagacgttgtccca-ttttttgtttatctgcgtctcgggtctttacccactagatgccactgtctcctaccccatcgtcgtgacaaccaaaaatgtcc i panTro5.chr3 C 0 C 0 s panPan2.chr3 30061 124 - 205426864 ga-tctggcctggacattt-ctttgctcccagacgttctccca-ttttttgtttatctgcgtctcgggtctttacccactagatgccactgtctcctaccccatcgtcgtgacaaccaaaaatgtcc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 48510 124 + 508821 ga-tttggcctggacattt-ctttgctcccagacgttgtccca-ttctttgtttatctgcgtctcgggtctttacccactagatgccactgtctcctaccccatcgtcgtgacagccaaaaatgtcc i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81800888 124 + 180051392 gattttggcctggacattt--tttgctttgggaagttgtccca-ttctttgtttatcagcatcttgggtctgtacccactagatgcccctttcccctaccccatcgctgtgacaaccaaaaatgtcc i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17428208 124 - 20287406 gattttggcctggacattt--tttgctttgggaagttgtccca-ttctttgtttatcagcatcttgggtctgtacccactagatgcccctttcccctaccccatcgctgtgacaaccaaaaatgtcc i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79050853 124 + 91010382 gattttggcctggacattt--tttgctttgggaagttgtccca-ttctttatttatcagcatcttgggtctgtacccactagatgcccctttcccctaccccattgctgtgacaaccaaaaatgtcc i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3453510 124 + 21726897 gattttggcctggacattc--tttgctttgggaagttgtccca-ttctttgtttatcagcatcttgggtctgtacccactagatgtcactttcccctaccccatcgctgtgacaaccaaaaatgtcc i colAng1.NW_012115488v1 C 0 I 40 s calJac3.chr2 81146500 125 - 204313951 -attttggcct-gacattttctttgcttttggaaactgtcccagttcttcgtatatcagcattttggatctttacccactggatgccactttccgctaccacattattgtgacaaccaaaaatgtcc i calJac3.chr2 I 1 C 0 s saiBol1.JH378106 16146265 125 - 71252344 -attttggcct-gacattttctttgctttgggaaactgtcccagttcttcacatatcaggattttgggtctttacccattggatgccactttcccctgtcacattattgtgacaaccaaaaatgtcC i saiBol1.JH378106 I 1 C 0 s aotNan1.NW_018506370v1 4175967 125 + 15889662 -atattggcct-gacattttctttgctttgggaaactgtcccagtccttcgtatatcagcattttgggtctttacccactggatgccactttcccctaccacattattgtgacaaccaaaaatgtcc i aotNan1.NW_018506370v1 I 1 C 0 e cebCap1.NW_016107331v1 5489550 175 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=129856.000000 s hg38.chr3_KI270784v1_alt 142119 38 + 184404 aggtttacctcgggggacaaaatcatccctgtggaaaa s panTro5.chr3 36868 38 - 202621043 aggtttacctcgggggacaaaatcatccctgtggaaaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 30185 38 - 205426864 aggtttacctcgggggacaaaatcatccctgTGGAAAA i panPan2.chr3 C 0 M 137 s gorGor5.CYUI01015884v1 48634 38 + 508821 aggtttacctcgggggacaaaatcatccctgtggaaaa i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81801012 38 + 180051392 aggtttaccttggggggcaaaatcatccctgttgaaaa i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17428332 38 - 20287406 aggtttaccttggggggcaaaatcatccctgttgaaaa i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79050977 38 + 91010382 agatttaccttggggggcaaaatcatccctgttgaaaa i chlSab2.chr4 C 0 C 0 s calJac3.chr2 81146625 37 - 204313951 aggtttaccttgggggg-aaaatcatccctgttaaaaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16146390 37 - 71252344 AGGTTTACCTCGAGGGG-AAAATAATCCCTCTTAAAAG i saiBol1.JH378106 C 0 C 0 s aotNan1.NW_018506370v1 4176092 37 + 15889662 aggtttaccttgggggg-aaaatcatccctgttaaaaa i aotNan1.NW_018506370v1 C 0 C 0 e cebCap1.NW_016107331v1 5489550 175 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3453634 40 + 21726897 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=16304.000000 s hg38.chr3_KI270784v1_alt 142157 5 + 184404 ctgct s panTro5.chr3 36906 5 - 202621043 ctgct i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 48672 5 + 508821 ctgct i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81801050 5 + 180051392 ctgct i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17428370 5 - 20287406 ctgct i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79051015 5 + 91010382 ctgct i chlSab2.chr4 C 0 C 0 s calJac3.chr2 81146662 5 - 204313951 ctgct i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16146427 5 - 71252344 TTGCT i saiBol1.JH378106 C 0 C 0 s aotNan1.NW_018506370v1 4176129 5 + 15889662 ctgct i aotNan1.NW_018506370v1 C 0 C 0 e cebCap1.NW_016107331v1 5489550 175 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3453634 40 + 21726897 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M e panPan2.chr3 30223 137 - 205426864 M a score=1910.000000 s hg38.chr3_KI270784v1_alt 142162 2 + 184404 AG s panTro5.chr3 36911 2 - 202621043 AG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 48677 2 + 508821 AG i gorGor5.CYUI01015884v1 C 0 C 0 s chlSab2.chr4 79051020 2 + 91010382 AG i chlSab2.chr4 C 0 I 4 s saiBol1.JH378106 16146432 2 - 71252344 AG i saiBol1.JH378106 C 0 C 0 e aotNan1.NW_018506370v1 4176134 0 + 15889662 C e cebCap1.NW_016107331v1 5489550 175 + 12262279 I e calJac3.chr2 81146667 0 - 204313951 C e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3453634 40 + 21726897 I e rheMac8.chr6 81801055 0 + 180051392 C e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macNem1.NW_012016021v1 17428375 0 - 20287406 C e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M e panPan2.chr3 30223 137 - 205426864 M a score=1420.000000 s hg38.chr3_KI270784v1_alt 142164 4 + 184404 CTGA s panTro5.chr3 36913 4 - 202621043 CTGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 48679 4 + 508821 CTGG i gorGor5.CYUI01015884v1 C 0 C 0 s saiBol1.JH378106 16146434 4 - 71252344 TTGA i saiBol1.JH378106 C 0 C 0 e aotNan1.NW_018506370v1 4176134 0 + 15889662 C e cebCap1.NW_016107331v1 5489550 175 + 12262279 I e calJac3.chr2 81146667 0 - 204313951 C e cerAty1.NW_012005170v1 10597 25901 + 97742 I e colAng1.NW_012115488v1 3453634 40 + 21726897 I e rheMac8.chr6 81801055 0 + 180051392 C e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 79051022 4 + 91010382 I e macNem1.NW_012016021v1 17428375 0 - 20287406 C e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M e panPan2.chr3 30223 137 - 205426864 M a score=10182.000000 s hg38.chr3_KI270784v1_alt 142168 80 + 184404 atatatatatatatatatatatatatatatatatatatatatatatatttttttttttttttttttttttttttttttgg s panTro5.chr3 36917 46 - 202621043 atatatatatatatatatatata----------------------------------tttttttttttttttttttttga i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 48683 73 + 508821 ATACatatatacatatacatgtatatatatatatatatatata-------ttttttttttttttttttttttttttttga i gorGor5.CYUI01015884v1 C 0 C 0 e aotNan1.NW_018506370v1 4176134 0 + 15889662 C e cebCap1.NW_016107331v1 5489550 175 + 12262279 I e calJac3.chr2 81146667 0 - 204313951 C e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16146438 0 - 71252344 C e colAng1.NW_012115488v1 3453634 40 + 21726897 I e rheMac8.chr6 81801055 0 + 180051392 C e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 79051022 4 + 91010382 I e macNem1.NW_012016021v1 17428375 0 - 20287406 C e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M e panPan2.chr3 30223 137 - 205426864 M a score=102146.000000 s hg38.chr3_KI270784v1_alt 142248 194 + 184404 gacagagtctcgctctgtctcccaggctggagtgcggtggcgcgatctcggctcactgcaagctccgcctcccgggttcacatcattctccggcctcagcctcccgagtagctgggactacaggcgcgtgccaacatgcccggctaattttttgtatttttagtagagacggggtttcaccgtgttagccagga s panTro5.chr3 36963 194 - 202621043 gacggagtctcgctctgtctcccaggctggagtgcagtggtgcgatctcggctcactgcaagctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacaggcacccgccaccacgcctggctaattttttgtatttttagtagagacggggtttcaccgtgttagccagga i panTro5.chr3 C 0 C 0 s panPan2.chr3 30361 194 - 205426864 gacggagtctcgctgtgttgcccaggctggagtgcagtggtgcgatctcggctcactgcaagctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacaggcacccgccaccacgcctggctaattttttgtatttttagtagagacggggtttcaccgtgttagccagga i panPan2.chr3 M 137 C 0 s gorGor5.CYUI01015884v1 48756 194 + 508821 gacggagtctcgctctgtctcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcccgggttcacatcattctcctgcctcagcctcccgagtagctgggactacgggcacccgccaccgcgcctggctaattttttgtatttttagtagagacggggtttcaccgtgttagccagga i gorGor5.CYUI01015884v1 C 0 C 0 e aotNan1.NW_018506370v1 4176134 0 + 15889662 C e cebCap1.NW_016107331v1 5489550 175 + 12262279 I e calJac3.chr2 81146667 0 - 204313951 C e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16146438 0 - 71252344 C e colAng1.NW_012115488v1 3453634 40 + 21726897 I e rheMac8.chr6 81801055 0 + 180051392 C e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 79051022 4 + 91010382 I e macNem1.NW_012016021v1 17428375 0 - 20287406 C e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=18828.000000 s hg38.chr3_KI270784v1_alt 142442 6 + 184404 AGTTGC s panTro5.chr3 37157 6 - 202621043 AGTTGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 30555 6 - 205426864 AGTTGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 48950 6 + 508821 AGTTGG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81801055 6 + 180051392 AGTTGG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17428375 6 - 20287406 AGTTGG i macNem1.NW_012016021v1 C 0 C 0 s colAng1.NW_012115488v1 3453674 6 + 21726897 AGTTGG i colAng1.NW_012115488v1 I 40 C 0 s calJac3.chr2 81146667 6 - 204313951 AGTTGG i calJac3.chr2 C 0 C 0 s aotNan1.NW_018506370v1 4176134 6 + 15889662 AGTTGG i aotNan1.NW_018506370v1 C 0 C 0 e cebCap1.NW_016107331v1 5489550 175 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16146438 0 - 71252344 C e manLeu1.NW_012101680v1 15363 21042 + 85016 I e chlSab2.chr4 79051022 4 + 91010382 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=3785.000000 s hg38.chr3_KI270784v1_alt 142448 1 + 184404 T s panTro5.chr3 37163 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 30561 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 48956 1 + 508821 T i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81801061 1 + 180051392 T i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17428381 1 - 20287406 T i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79051026 1 + 91010382 T i chlSab2.chr4 I 4 C 0 s colAng1.NW_012115488v1 3453680 1 + 21726897 T i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81146673 1 - 204313951 T i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16146438 1 - 71252344 C i saiBol1.JH378106 C 0 C 0 s aotNan1.NW_018506370v1 4176140 1 + 15889662 T i aotNan1.NW_018506370v1 C 0 C 0 e cebCap1.NW_016107331v1 5489550 175 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=1553891.000000 s hg38.chr3_KI270784v1_alt 142449 346 + 184404 AATATTAATAGTACCTATACCATAGATTTATTGCAAAAAATaaacaaggttaaactattacgtgggtcatggggttgttgtgaaaattaattgtaacaaagttcctaacaaatagtaaatgatcaagaaacgttcgttattattATTTGACTTCAGCCCTTTTTTATGCCATAAAACAGTAATACCCAAGTTCTCTTCCACTTCTTAAATTATAT--GATTATTTCAGGTTATATCTAATATATCTAATCAGATTATATCTAATTCGTTATAAAATCAGTTGAAACTTTTTCAGCGAAGATCACTGAAGTAAAATAAATACAGATCGTAATTTTTAAATTGTCCTGTA s panTro5.chr3 37164 346 - 202621043 AATATTAATAGTACCTATACCATAGATTTATTGCCAAAAATAAACAAGATTAAACTATTACGTGGGtcatggggttgttgtgaaaattaattgtaacaaagttcctaacaaatagtaaatgatcaagaaacgttcgttattattATTTGACTTCAGCCCTTTTTTATGCCATAAAACAGTAATACCCAAGTTCTCTTCCACTTCTTAAATTATAT--GATTATTTCAGGTTATATCTAATATATCTAATCAGATTATATCTAATTCGTTATAAAATCAGTTGGAACTTTTTCGGCAAAGATCACTGAAGTAAAATAAATACAGATCGTAATTTTTAAATTGTCCTGTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 30562 346 - 205426864 AATATTAATAGTACCTATACCATAGATTTATTGCAAAAAATAAACAAGATTAAACTATTACGTGGGtcatggggttgttgtgaaaattaattgtaacaaagttcctaacaaatagtaaatgatcaagaaacgttcgttattattATTTGACTTCAGCCCTTTTTTATGCCATAAAACAGTAATACCCAAGTTCTCTTCCACTTCTTAAATTATAT--GATTATTTCAGGTTATATCTAATATATCTAATCAGATTATATCTAATTCGTTATAAAATTAGTTGAAACTTTTTCAGCGAAGATCACTGAAGTAAAATAAATACAGATCGTAATTTTTAAATTGTCCTGTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 48957 346 + 508821 AATATTAATAGTACCTATACCATAGATTTATTGCAAAAAATAAACAAGATTAAACTATTACGTGGGtcatggggttgttgtgaaaattaattgtaacaaagttcctaacaaatagtaaatgatcaagaaacgttcgttattattATTTGACTTCAGCCCTATTTTATGCCATAAAACAGTAATACCCAAGTTCTCTTCCACTTCTTAAATTATAT--GATTATTTCAGGTTATATCTAATACATCTAATCAGATTATATCCAATTCGCTATAAAATCAGTTGAAACTTTTTCAGCGAAGATCACTGAAGTAAAATAAATACAGATCGTAATTTTTAAATTGTCCTGTA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81801062 309 + 180051392 AATATTAATAGCACCTATACTATAGATTTACTGCAAAAAGTAAACAAGATTAAACTATTACCTGGGTCATGGGCTTGATGTGAGAATTCATTGTAGTGAAGTTCCTAACAAATAGTAAATGATCAAGAAATG-------------------TAAGGCCCTATTTTATGCCATAAAACAGtaatacccaagttcccttccagttcttaaattctat--gattctTTCAGGTTATA-----------TAA-------ATATCAAATTCCCTATAAAATCAATTTAAACTTTTTCAGCAATGATCACTGAAGTAAAATAAATGCATACCATAATTTTTAAATTGTCCTGTA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17428382 328 - 20287406 AATATTAATAGCACCTATACTATAGATTTACTGCAAAAAGTAAACAAGATTAAACTATTACCTGGGTCATGGGCTTGATGTGAGAATTCATTGTAGTGAAGTTCCTAACAAATAGTAAATGATCAAGAAATGTTAGTTATTTTTATTTGACTTAGGCCCTATTTTATGCCATAAAACAGtaatacccaagttcccttccagttcttaaattctat--gattctTTCAGGTTATA-----------TAA-------ATATCCAATTCCCTATAAAATCAATTTAAACTTTTTCAGCAATGATGACTGAAGTAAAATAAATGCATACCATAATTTTTAAATTGTCCTGTA i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79051027 328 + 91010382 AatattaatagcacctatactatagatttactgcaaaaaataaacaagattaaactattacctgggtcatgggcttgatgtgagaattcattgtagtgaagttcctaacaaatagtaaatgatcaagaaatgttagttatttttATTTGACTTAGGCCCTATTTTATGCCATAAAACAGtaatacccaagttcccttccagttcttaaattctat--gattctTTCAGGTTATA-----------TAA-------ATATCCAATTCCCTATAAAATCAATTGAAACTTTTTCAGCAATGATCACTGAAGTAAAATAAATGCATACCATAATTTTTAAATTGTCCTGTA i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3453681 328 + 21726897 AATATTAATAGCACCTATACCATAGATTTACTGCAAAACATAAACAAGATTAAACTATTACCTGGGTCATGGGCTTGATGTGAGAATTAATTGTAGCAAAGTTCCTAACAAATAGCAAATGATCAAGAAACGTTAGTTATTTTTATTTGACTTAGGCCCAATTTTGTGCCATAAAACAGtaatacccaagttcccttccagttcttaaattctat--gattctTTCAGGTTATA-----------TAA-------ATATCCAATTCCCTACGAAATCAATTGAAGCTTTTTCAGCAATGATCACTGAAGTAAAATAAATGCATACCACAATTTTTAAATTGTCCTGTA i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81146674 329 - 204313951 AATGTTAATAGCACCTATACTATAGATTTATTGCAAAAAATAAACAAAAATAAATTATAACCTGGGTCatggg-ttgacatgagaattaattatagcaaagttcccaacaaatagtaaatgatcaagaaatgttagttattatGATTTGACTTAGTCCTTATTTTATGCTATAACACTGTAGTATCCAAGTTCTCTTCCAGTTCTTAAATTCTTTTAAATTATTTCAGATTATA-----------TAA-------ATATGTAATTCCCTATAAAATCAATTGAAACTTTTTCAGCAAAGATCACTGAAATAAAATAAATGCAGGTCATAATTTTTAAATCATCCTGTA i calJac3.chr2 C 0 I 3 s saiBol1.JH378106 16146439 312 - 71252344 AATGTtaatagcacctataccatagatttattgcaaaaaata----------------aacctgtgtcatggg-ttgacatcataattaattatagcaaagttcccaataaatagtaaatgatcaagaaatgttatttattatGATTTGACTTAGGCCTTATTTTATGCTATAACACAGTAATATCCAAGTTCTCTTCCCGTTCTTAAATTCTTTTAAATTATTTCAGATTATG-----------TAA-------ATATGTAATTCCCTATAAAATCAATTGAAAA-TTTTCAGCAAAGGTCACTGAAATAAAATACATGCAGATGATAATTTTTAAATCATCCTGTA i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5489725 328 + 12262279 AATGTTAATAGCACCTATGCCACAGATTTATTGCAAAAAATAAACAAGATTAAATTATGacctgggtcatggg-ttgatgtgataattaattatagcaaagttcccaacaaatagtaaatgatcaagaaatgttagttattatgatttgaCTTAGGCCTTATTATATGCTACAACACAGTAATATCCAAGTTTTCTTCCAGTTCTTAAATCATTTTAAGTTATTTCAGATTATG-----------AAA-------ATATGTAATTCCCTATAAAATCAATCGAAAA-TTTTCAGCAAAGATCATCGAAATAAAATAAATGCAGATCATAATTTTTAAATTGTCCTGTA i cebCap1.NW_016107331v1 I 175 C 0 s aotNan1.NW_018506370v1 4176141 329 + 15889662 AATGTTAATAGCACCTATACCTTAGATTTATTGCAAAAAATAAACAAGATTAaattataacctggatcatggg-ttgacgtgagaattaattacagcaaagttcccaacaaatagtaaatgatcaagaaatgttagttattatGATTTGACTTAGGCCTTATTTTATGCTATAACACAGTAATATCCAAGTTCTCTTCCAGTTCTTAAATTATTTTAAGTTATTTCTGATTATA-----------TAA-------ATATATAATTCCCTATAAAATCAATTGAAACTTTTTCAGCAAAGATCACTGAAATAAAATAAATGCAGATCATAATTTTTAAATCGTCCTGTA i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=5500.000000 s hg38.chr3_KI270784v1_alt 142795 1 + 184404 G s panTro5.chr3 37510 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 30908 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 49303 1 + 508821 G i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81801371 1 + 180051392 G i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17428710 1 - 20287406 G i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79051355 1 + 91010382 G i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3454009 1 + 21726897 G i colAng1.NW_012115488v1 C 0 C 0 s saiBol1.JH378106 16146751 1 - 71252344 G i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5490053 1 + 12262279 G i cebCap1.NW_016107331v1 C 0 I 58 s aotNan1.NW_018506370v1 4176470 1 + 15889662 G i aotNan1.NW_018506370v1 C 0 I 125 e calJac3.chr2 81147003 3 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=2596.000000 s hg38.chr3_KI270784v1_alt 142796 2 + 184404 TC s panTro5.chr3 37511 2 - 202621043 TC i panTro5.chr3 C 0 C 0 s panPan2.chr3 30909 2 - 205426864 TC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 49304 2 + 508821 TC i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81801372 2 + 180051392 AC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17428711 2 - 20287406 AC i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79051356 2 + 91010382 AC i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3454010 2 + 21726897 AC i colAng1.NW_012115488v1 C 0 C 0 s saiBol1.JH378106 16146752 2 - 71252344 AC i saiBol1.JH378106 C 0 C 0 e aotNan1.NW_018506370v1 4176471 125 + 15889662 I e cebCap1.NW_016107331v1 5490054 58 + 12262279 I e calJac3.chr2 81147003 3 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=307370.000000 s hg38.chr3_KI270784v1_alt 142798 140 + 184404 ACAAATAGGAAAATGAAAATAGATGTATTTTATATGTAAGATAAAAGTACCTTATGGGAAAGGAAGAATATGCATATGTATTATTTACAATTTTTATAAT---ATTTATTATAATTAAACGCTGCATGAAAGCTATTAATAGT s panTro5.chr3 37513 140 - 202621043 ACAAACAGGAAAATGAAAATAGATGTATTTTATATGTAAGATAAAAGTAGCTTATGGGAAAGGAAGAATATGCAtatgtattatttacaatttttataat---atttattatAATTAAACGCTGCATGAAAGCTATTAATAGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 30911 140 - 205426864 ACAAATAGGAAAATGAAAATAGATGTATTTTATATGTAAGATAAAAGTAGCTTATGGGAAAGGAAGAATATGCAtatgtattatttacaatttttataat---atttattatAATTAAGCGCTGCATGAAAGCTATTAATAGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 49306 140 + 508821 ACAAATAGGAAAATGAAAATAGATGTATTTTATATGTAAGATAAAAGCACCTTATGGGAAAGGAAGAATATGCATATGTATTATTTACAATTTTTATAAT---ATTTATTATAATTAAACGCTGCATGAAAGCTATTAATAGT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81801374 141 + 180051392 ACAAATAGGAAAATGAAAATAGATGTATTTTATATATAATGT-AAAGTATCTTATGGGAAAGAAAGAATATGTATCTGTATTATTTACAGTTTTTATAATACTATTTATTATAATTAAAGGCTACAT-AAAACTATTAATAGT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17428713 141 - 20287406 ACAAATAGGAAAATGAAAATAGATGTATTTTATATATAATGT-AAAGTATCTTATGGGAAAGAAAGAATATGTATCTGTATTATTTACAATTTTTATAATACTATTTATTATAATTAAAGGCTACAT-AAAACTATTAATAGT i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79051358 141 + 91010382 ATAAATAGGAAAATGAAAATAGATGTATTTTATATATAATGT-AAAGTATCTTATGGGAAAGAAAGAATATGTATCTATATTATTTACAATTTTTATAATACTATTTATTATAATTAAAGGCTACAT-AAAACTATTAATAGT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3454012 141 + 21726897 ACAAATAGGAAAATGAAAATAGATGTATTTTATATATAAGAT-AAAGTATCTTATGGGAAAGAAAGAATATGTATCTGTATTATTTACAATTTTTATAATACCATTTATTATAATTAAAGGCTACGT-AAAACTATTAATAGT i colAng1.NW_012115488v1 C 0 C 0 e aotNan1.NW_018506370v1 4176471 125 + 15889662 I e cebCap1.NW_016107331v1 5490054 58 + 12262279 I e calJac3.chr2 81147003 3 - 204313951 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e saiBol1.JH378106 16146754 0 - 71252344 C e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=173420.000000 s hg38.chr3_KI270784v1_alt 142938 59 + 184404 ACTTATTTTTACACAGAGTAAGAAACTTTGAGACACTTTT-CCCTTTTGCGTTCTA-----TTAC s panTro5.chr3 37653 59 - 202621043 ACTTATTTTTACACAGAGTAAGAAACTTTGAGACACTTTT-CCCTTTTGCGTTCTA-----TTAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 31051 59 - 205426864 ACTTATTTTTACACAGAGTAAGAAACTTTGAGACACTTTT-CCCTTTTGCGTTCTA-----TTAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 49446 59 + 508821 ACTTATTTTTACACAGAGTAAGAAAATTTGAGACACTTTT-CCCTTTTGTGTTCTA-----TTAC i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81801515 62 + 180051392 ATTTATTTTTATACAGAGTAACAAACTTTGAGGCACTTTTACCCTTTTCTATTCCATT---TTAT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17428854 62 - 20287406 ATTTATTTTTATACAGAGTAACAAACTTTGAGGCACTTTTACCCTTTTCTATTCCATT---TTAT i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79051499 62 + 91010382 ATTTATTTTTATACAGAGTAAGAAACTTTGAGGCACTTTTACCCTTTTCTATTCCATT---TTAT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3454153 62 + 21726897 ATTTATTTTTATACAGAGTAAGAAACTTTGAGGCACTTTTACCCTTTTCTATTCCATT---TTAT i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81147006 63 - 204313951 ACTTATTTTTATATAGTTTAAGAAACGTTGAGACACGTTTACCCTTTTCTATTCCATTTTATT-- i calJac3.chr2 I 3 C 0 s saiBol1.JH378106 16146754 60 - 71252344 ACTTATTTTTATATAGAGTAAGAAATGTTGAGACACATTTACCCTTTTCTATTCCATT---TT-- i saiBol1.JH378106 C 0 C 0 e aotNan1.NW_018506370v1 4176471 125 + 15889662 I e cebCap1.NW_016107331v1 5490054 58 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=519351.000000 s hg38.chr3_KI270784v1_alt 142997 141 + 184404 TTTTTATTACA----------------------------------------------TATACATATAT----------------------AAACATAACTTAAAACTTTCTCATGGGGGCTTGCCAGAGCTTCTGTTTAA---CCTCAGTCATGAAGAGCTCTCTTAATTCTGCCAATTCACGAGAACAAAAG-ACTTGCTTGTGCTGAAAGC s panTro5.chr3 37712 144 - 202621043 TTTTTATTACA----------------------------------------------TATACATATAT----------------------AAACATAACTTAAAACTTTCTCATGGGGGCTTGCCAGAGCTTCTGTTTAACCTCCTCAGTCATGAAGAGCTCTCTTAATTCTGCCAATTCACGAGAACAAAAG-ACTTGCTTGTGCTGAAAGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 31110 144 - 205426864 TTTTTATTACA----------------------------------------------TACACATATAT----------------------AAACATAACTTAAAACTTTCTCATGGGGGCTTGCCAGAGCTTCTGTTTAACCTCCTCAGTCATGAAGAGCTCTCTTAATTCTGCCAATTCACGAGAACAAAAG-ACTTGCTTGTGCTGAAAGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 49505 144 + 508821 TTTTTATTACA----------------------------------------------TATACATATAT----------------------AAACATAACTTAAAACTTTCTCATGGGGGCTTGCCAGAGCTTCTGTTTAACCTCCTCAGTCAGGATGAGCTCTCTTAATTCTGCCAATTCACGAGAACAAAGG-ACTTGCTTGTGCTGAAAGC i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81801577 191 + 180051392 TTTTTATtgtgtgtgtgtgtgtgtgtatatatatatatatatatatatatatatatatatatatatTT----------------------AGATGTCACTTAAAACTTTCTTATGGGGGCCTGCCAGAGATTCTATTTAACATCCTCATTTATGATGAGCTCGCTTAATTCTGCAAGTTCACAAGAACAAAAGCCCTTGCTTGTGCTGAAAGC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17428916 185 - 20287406 TTTTTATtgtgtgtgtgtgtgtgtg------tgtgtatatatatatatatatatatatatatatatTT----------------------AGATGTCACTTAAAACTTTCTTATGGGGGCTTGCCAGAGATTCTATTTAACATCCTCATTTATGATGAGCTCGCTTAATTCTGCAAGTTCACAAGAACAAAAGCCCTTGCTTGTGCTGAAAGC i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79051561 171 + 91010382 TTTTTATTGCa--------------------tatatctatatctagatatatagatatagatatattt----------------------agatGTCACTTAAAACTTTCTTATGGGGGCTTGCCAGAGATTCTATTTAACATCCTCATTTATGATGAGCTCTCTTAATTCTGCAAGTTCACAAGAACAAAAGCCCTTGCTTGTGCTGAAAGC i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3454215 149 + 21726897 TTTTTATTGTA------------------------------------------TATATATATATATTT----------------------AGATGTCACTTAAAACTTTCTTATGGGGGCTTGCCAGAGATTCTATTTAACATCCTCATTTATGATGAGCTCTCTTAATTCTGCAAGTTCACAAGAACAAAAGCCCTTGCTTGTGCTGAAAGC i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81147069 167 - 204313951 TTTTTATtaca----------------------------------------------tatatatatatatatatatatatgtatgtataaatatGCCACTTAAAACTTTCTTATGGGGGCTTGCTAGAGATTCTATTTAACCTCCTCATAAATGATGAGCTCTCTCAATTCTGCTACTTCACAAGAACAAAAGCCCGTGCTTGTGCCGAAAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16146814 139 - 71252344 TTTAAATTACA----------------------------------------------TATAC----------------------------ATATGCCACTTAAAACTTTCTTAGAGGGGCTTGCCAGAGATTCTATTTAACCTCCTCATTTATGATGAGCTCTCTCAATTCTGCTAGTTCACAAGAACAAAAGCCCTGGCTTGTACTGAAAGG i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5490112 139 + 12262279 TTTTTATTACA----------------------------------------------TATAC----------------------------ATATGTCAATTAAAACTTTCTTATGGGGACTTGCCAGAGATTCTATTTAACCTCCTCATTTATGATAAGCTCTCTCAATTCTGCTAGTTGACAAGAACAAAAGCCCTTGCTTGTGCTGAAAGG i cebCap1.NW_016107331v1 I 58 C 0 e aotNan1.NW_018506370v1 4176471 125 + 15889662 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=2308868.000000 s hg38.chr3_KI270784v1_alt 143138 445 + 184404 CATTACAAATTGGAGACatgggttgatgcagtattcccaagtggggtgtttacatagtgcccaaaatccagagaaccataaccaacactgcgatgcttttatatgtcagctggtacaaaatgcaataatttaccatcttgtcctcta-catggaaggtatcctgaattactgagggcaaccgcaaacctaaaatatttaccagtgaaaggccagtctcaagactgtaggttttatgtttcagattatggtttattgttcacattcctgtacaagagtatcagaaaatgacatttcttgctcactagggctgataaatctgatatcatcaatatagtgatcaatattttggtctttgtaattttaagactattaaggttacttcaggtcatattataacaaaacacaatcatagccctgggcaagacagcaaatatgttctgtggtc s panTro5.chr3 37856 445 - 202621043 CATTACAAATTGGAGacatgggttgatgcagtattcccaagtggggtgtttacatagtgcccaaaatccagagaaccataaccaacactgcgatgcttttatatgtcagctggtacaaaatgcaataatttaccatcttgtcctcta-catggaaggtatcctgaattactgagggcaaccgcaaacctaaaatatttaccagtgaaaggccagtctcaagattgtaggttttatgtttcagattatggtttattgttcacattcccgtacaagagtatcagaaaatgacatttcttgctcactagggctgataaatctgatatcatcaatatagtgatcaatattttggtctttgtaattttaagactattaaggttacttcaggtcatattataacaaaacacaatcatagccctgggcaagacagcaaatatgttctgtggtc i panTro5.chr3 C 0 C 0 s panPan2.chr3 31254 445 - 205426864 CATTACAAATTGGAGACatgggttgatgcagtattcccaagtggggtgtttacatagtgcccaaaatccagagaaccataaccaacactgcgatgcttttatatgtcagctggtacaaaatgcaataatttaccatcttgtcctcta-catggaaggtatcctgaattactgagggcaaccgcaaacctaaaatatttaccagtgaaaggccagtctcaagattgtaggttttatgtttcagattatggtttattgttcacattcctgtacaagagtatcagaaaatgacatttcttgctcactagggctgataaatctaatatcatcaatatagtgatcaatattttggtctttgtaattttaagactattaaggttacttcaggtcatattataacaaaacacaatcatagccctgggcaagacagcaaatatgttctgtggtc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 49649 445 + 508821 CATTACAAATTGGAGacatgggttgatgcagtattcccaagtggggtgtttacatagtgcccaaaatccagagaaccataaccaacactgcgatgcttttatatgtcagctggtacaaaatgcaataatttaccatcttgtcctcta-catggaaggtatcctgaattactgagggcaaccgcaaacctaaaatatttaccagtgaaaggccagtctcaagactgtaggttttatgtttcagattatggtttattgttcacattcctgtacaagagtatcggaaaatgacatttcttgctcactagggctgataaatctgatatcatcaatatagtgatcaatattttggtctttgtaactttaagactattaaggttacttcaggtcatattataagaaaacacaatcacagccctgggcaagacagcaaatatgttctgtggtc i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chr6 81801768 442 + 180051392 CATTAAACATTGGACAAatggattgatgcagcattcccaagtgtggtgtttatacagtgcccaaaatccagagaaccataacaaacactgtgatgcttttatatgtcagctggtacaaaatgcaataatttaccatcttgtcctctgccatggaaggtatcctgaattactgaagacaactgcaatgctaaaatatttaccagtgaaagacc---tttgagatttcaggttttatgtttcagattctgttttattgtttacattgctgtacaagagtatcagaaaatgacatttcttgctcgctagggctgattaatctgatatcatcaatatagtgatcaatattttggtctttgt-attttaagactattaaggttacttcaggtcatagtataacaaaatacaattgtaaccctgggcaagacagcaaatgtgttctgtggtc i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17429101 442 - 20287406 CATTAAACATTGGACAAatggattgatgcagcattcccaagtgtggtgtttatacagtgcccaaaatccagagaaccataacaaacactgtgatgcttttatatgtcagctggtacaaaatgcaataatttaccatcttgtcctctgccatggaaggtatcctgaattactgaagacaactgcaatgctaaaatatttaccagtgaaagacc---tttgagattgcaggttttatgtttcagattctgttttattgtttacattgctgtacaagagtatcagaaaatgacatttcttgctcgctagggctgattaatctgatatcatcaatatagtgatcaatattttggtctttgt-attttaagactattaaggttacttcaggtcatagtataacaaaatacaattgtaaccctgggcaagacagcaaatgtgttctgtggtc i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79051732 442 + 91010382 CATTAAACATTGGACaaatggattgatgcagcattcccaagtgtggtgtttatacagtgcccaaaatccaaagaactataacaaacactgtgatgcttttatatgtcagctggtacaaaatgcaataatttaccattttgtcctctgccatggaaggtatcctgaattactgaagacaactgcaacgctaaaatatttaccagtgaaagacc---catgagattgcaggttttatatttcagattctgttttattgtttacattcctgtacaagagtatcagaaaatgacatttcttgctcgctagggctgattaatctgatatcatcaatataatgatcaatattttggtctttgt-attttaagattattaaggttacttcaggtcatattataacaaaatacaattgtacccctgggcaagacagcaaatgtgttctgtggtc i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3454364 442 + 21726897 CGTTAAACATTGGACaaatggattgatgcagcattcccaagtgtggtgtttatatagtgccccaaatccagagaaccgtaacaaacactatgatgcttttatatgtcagctggtacaaaatgcaataatttaccatcttgtcctctgccatggaaggtatcctgaattactgaagacaactgcaacactaaaatatttaccagtgaaagacc---cttgagattgcaggttttttgtttcagattctgctttattgtttacattcctgtacaagagtatcagaaaatgacatttcttgctcgctagggctgattaatctgatatcatcaatatagtgaccaatattttggtctttga-attttaagactattaaggttacttcaggtcatattataacaaaatacaattgtaaccctgggcaagacagcaaatgtgttctgtggtc i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81147236 442 - 204313951 CATTAAAAATTGgataaatgggttgatgcagtattctcaaatgtggtgtttatatagtaccccaaatccagaaaaccataagaaacactgtgatgcttttatatgtcaggtggtataaaatgcagtaatttaccatcttatcctctaccgtagaagatatcctgaattactgaagacaactgcaactctaaaatatttaccagtaaaagtcc---cttgagactgtaggttttatctttcatattctgttttattgttcacattcctgtacaagagtatcagaaaatgacatttcttgctcactagggctgataaatcttatatcatcaatataatgatcaatactttgttctttgtaattttaagactatt-aggttacttcgggtcatattataatgtaatgcaatcagagccctgggcaagacagcaaatgtgttctgcggcc i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16146953 435 - 71252344 CATTAAAAATTGgataaatgggttgatgcagtattcccaaatgtggtgtttacatagtgccccaaatccagaaaacaataacaaacactgtgatgcttttgtatgtcaggtggtacaaaatgcaataatttaccatctcatcctctaccatagaagatctcctgaattactgaagacaattacaaccctaaaatatttac--------agcc---cttgagactgtaggttttatatttcagattctgttttattgttcacattcctgtacaagagtatcagaaaatgacatttcttgctcaccagggctgataaatctgatatcatcaatatattgatcaatactttgctctttgtaattttaagactattaagattacttcgggtcatactataatgaaatacaatcagagccctgggaaagacagcaaatgtgttctgtggcc i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5490251 443 + 12262279 CATTAAAAATTGgataaatgggttgatgcagtagtcccaaatgtggtgtttatatagtgccccaaatccagaaaaccataacaaacactgtgatgcatttatatgtcaggtggtacaaaatgcaataatttgccatctcatcctctaccatagaagatatcctgaattactgaaggcaattacaaacctaaaatatttaacagtgaaaggcc---cttgagactgtaggttttatatttcagattctgttttattgttcacattcctgtacaagagtatcagaaaatgacatgtcatgcttactagggcagataaatctgatatcatcaatataatgatcaatactttgctctttgtaattttaagactattaaggttacttcgggtcatattataaggaagtacaatcagagccctgggcaagacagcaaatgtgttctgtggcc i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4176596 443 + 15889662 CATTACAAATTGGATAAatgggttgatgcagtattctcaaatgtggtgtttatatagtgccccaaatccagaaacccataagaaacactgtgatgcttttatatgtcaggtgatataaaatgcaataatttaccatcttaccctctgccatagatgatatcctgaattactgaagacaactgcaaccctaaaatatttaccagtgaaaggcc---cttgagactgtaggttttatatttcatattctgttttattgttcacgttcctgtacaagagtatcagaaaatggcatttcttactcactagggctgataaatctgatatcatcaatataatgatcaatactttgctctttgtaattttaagacttttaaggttacttcgggtcatattataatgaaatacaatcagagccctgggcaagacagcaactgtgttctgtgggc i aotNan1.NW_018506370v1 I 125 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr21 44699221 2379 + 86207423 M a score=6032820.000000 s hg38.chr3_KI270784v1_alt 143583 1061 + 184404 ta-ccctggtgaatgaaaataccttttatctgttttcatgaaggggatagaaagtgatatttgtcagatcatagatgcaaaaccaagagtagaagctgggttgagctgttaaaatacag------------atactacataatatcaatacacagcagatgcatttggaattatcagttgctgacatttacatgattcccccatcatcctccagattcaaa-attttgcatgggtcattccagtacattaaatggggatgtgctagggacttcgacacctgca-ccccttttatctttgagaatgctattattactgccatCTTATTCGTTGCTGATTTTCTGT----------------------TTTCATGAGAGAATGTGATGGTGAAttttatgttaaccatttatgttttattttaccatttcctattccattttatgttttattactttt--------atttt--ttTACTGGCTTATGGGGTACCCAGAAAAct----gtgagactgattttggaggaacttggcatttgaatcagtaaactgagtaaagatgacctgcccttagcagtgtgggcaagcatcacgcaagctttgaaggccagaatacaacaaaacggcagaggaaaggcacatttgcttcctcttcta-taacagcaatatccatcttctcttcccctgaggagctcca-gtttttgagcgtttggatgccaggac-ttacaccattgactcttctggttcttagtcttcagactcattgaattacatcactggctttcctggttctccagcttgcagatggc--atagcatgggactttttgtcttccataattgtgtgagccaatttccacaataaattttctttatttatctctttttgtctctctctctc--tc--------------------tctgtctctatcctt---ctgtctctc------------tgtgtgtttgtgtgtgtgtgtgtgt--------gtgtgtgtgtgtgtgtgtgtgtgtgtcctattgattctgtttctatgaaaagcgctgcctaatacCGGAACTTTTGCTTGGTCTTCCCTACCATAATTGATCTTATTCTACATTTCAACAAACCAATGCAATTTCTGTAAGTTGCTGTGTACATCCATTTCAATT s panTro5.chr3 38301 1055 - 202621043 ta-ccctggtgaatgaaaataccttttatctgttttcatgaaggggatagaaagtgatatttgtcagatcatagatgcaaaaccaagagtagaagctgggttgagctgttaaaatacag------------atactacataatatcaatacacagcagatgcatttggaattatcagttgctgacatttacatgattcccccatcatcctccagattcaaa-attttgcatgggtcattccagtacattaaatggggatgtgctagggacttcgacacctgca-ccccttttatctttgagaatgctattattactgccatCTTATTCGTTGCTGATTTTCTGT----------------------TTTCATGAGAGAATGTGATGGTGAATTTTATGTTAACCAtttatgttttattttaccatttcctattccattttatgttttattactttt--------atttt--ttTACTGGCTTATGGGGTACCCAGAAAAct----gtgagactgattttggaggaacttggcatttgaatcagtaaactgagtaaagatgacctgcccttagcagtgtgggcaagcatcacgcaagctttgaaggccagaatagaacaaaacggcagaggaaaggcacatttgcttcctcttcta-taacagcaatatccatcttctcttcccctgaggagctcca-gtttttgagcgtttggatgccaggac-ttacaccattgactcttctggttcttagtcttcagactcgttgaattataccactggctttcctggttctccagcttgcagatggc--atagcatgggactttttgtcttccataattgtgtgagccaatttccacaataaattttctctatttatctctttttg--tctctctctc--tc--------------------tctgtctctatcctt---ctgtctctc------------tgtgtgtt----cgtgtgtgtgtgt--------gtgtgtgtgtgtgtgtgtgtgcgtatcctattgattgtgtttctatgaaaagcgctgcctaatacCGGAACTTTTGATTGGTCTTCCCTACCATAATTGATCTTATTCTACATTTCAACAAACCAATGCAATTTCTGTAAGTTGCTGTGCACATCCATTTCAATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 31699 1051 - 205426864 ta-ccctggtgaatgaaaataccttttatctgttttcatgaaagggatagaaagtgatatttgtcagatcatagatgcaaaaccaagagtagaagctgggttgagctgttaaaatacag------------atactacataatatcaatacacagcagatgcatttggaattatcagttgctgacatttacatgattcccccatcatcctccagattcaaa-attttgcatgggtcattccagtacattaaatggggatgtgctagggactttgacacctgca-ccccttttatctttgagaatgctattattactgccatcTTATTCGTTGCTGATTTTCTGT----------------------TTTCATGAGAGAATGTGATGGTGAATTTTATGTTAACCAtttatgttttattttaccatttcctattccattttatgttttattactttt--------atttt--ttTACTGGCTTATGGGGTACCCAGAAAAct----gtgagactgattttggaggaacttggcatttgagtcagtaaactgagtaaagatgacctgcccttagcagtgtgggcaagcatcacgcaagctttgaaggccagaatagaacaaaacggcagaggaaaggcacatttgcttccttttcta-taacagcaatatccatcttctcttcccctgaggagctcca-gtttttgagcgtttggatgccaggac-ttacaccattgactcttctggttcttagtcttcagactcattgaattacaccactggctttcctggttctccagcttgcagatggc--atagcatgggactttttgtcttccataattgtgtgagccaatttccacaataaattttctttatttatctctttttg--tctctctctc--tc--------------------tctgtctctatcctt---ctgtctctc------------tgtgtgtt--------tgtgtgtgt--------gtgtgtgtgtgtgtgtgtgtgtgtgtCCTATTGATTCTGTTTCTATGAAAAGCGCTGCCTAATACCGGAActtttgcttggtcttccctaccataattgattttattctacatttcaacaaaccaatgcaatttctgtaagttgctgtgtacatccatttcaatt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 50094 1039 + 508821 ta-ccctggtgaatgaaaataccttttatctgttttcatgaaggggatataaagtgatatttgtcagatcatagatgcaaaaccaagagtagaagctgggttgagctgttaaaatacag------------atactacataatatcaatacacagcagatgcatttggaattatcagttgctgacatttacatgattcccccatcatcctccagattcaaa-attttgcatgggtcattccagtacattaaatggggatgtgctagggacttcaacacctgca-ccccttttatctttgagaatgctattattactgccatCTTATTCGTTGCTGATTTTCTGT----------------------TTTCATTAGAGAATGTGATGGTTAAttttatgttaaccatttatgttttattttaccatttcctattccattttatgttttattactttt--------atttt--ttTACTGGCTTATGGGGTACCCAGAAAAct----gtgagactgattttggaggaacttggcatttgaatcagtaaagtgagtaaagatgacctgcccttagcagtgtgggcaggcatcatgcaagctttgaaggccagaatagaacaaaacggcagaggaaaggcacatttgcttcctcttcta-taacagcaatatccatcttctcttcccctgagaagcccca-gtttttgagcgtttggatgccaggac-ttacaccattgactcttctggttcttagtcttcagactcgttgaattacaccactggctttcctggttctccagcttgcagatggc--atagcatgggactttttgtcttccataattgtgtgagccaatttccacaataaattttctttatttatctctttttg--tctctctctc--tc--------------------tctgtctctatcctt---ctgtctctc------------tgtgtgcg----------------------------tgtgtgtgtgtgtgtgtgtgtgtCCTATTGATTCTGTTTCTATGAAAAGTGCTGCCTAATACCGGAActtttgcttggtcttccctaccataattgatcttattctacatttcaacaaaccaatgcaatttctgtaagttgctgtgtacatccatttcaatt i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr21 44701600 1076 + 86207423 TA-CCCTGGTGAATGAAAATACCTTTTATCTGTTTTCATGAAGGGGATagaaaatgatatttgtcagatcatagatgcaaaaccaagagtagaagctgcgttgagctgttaaaataaag------------atactacgcaatatcaacacacagcagatgcatttggaattatcagttactgacatttacatgattcccccatcatcctccagattcaaa-attttgcatgggtcattccagtacattaaatggggatgtgctagagacttcgacacctgca-ccctttttatctttgagaatgtgattatcgctgccatcTTATTTGTTGCTGATTTTCTGTTTTCATTACTGGGCAGACAGC-TTTCATTAGAGAATGTGGTGGttaattttatgttaaccatttatgttttattttaccatttcctattccattttacgtttttttactttt--------atttt--tttactGGCTTATGGGGTACCCAGAAAAct----gtgagactgattttggaggaacttagcatttgaatcagtaaactaagtaaagatgatctgccgttagcagtgtgggcaggcatcatgcaatcttcgaaggccagaatagaacaaaatggcagaggaaaggcaaatttgctttcccttcta-taacagcaatatccatcttctcttcccctgaggagctccc-gtgtttgagcctttggatgctaagac-tcacaccattgactcttctggtccttagtcttca-actcgttgaattacgccactggctttcctggttctccagcttgcagacggc--atagcatgggacttgttgtcttccacaactgtgtgagccaatttccacaataaattttctttatttgtctctttttg--tctctctttc--tc--------------------tCTGTCTCTATCCTT---CTGTCTCTC------------tgtgtgtt--tgtgtttgtgtttgt--------gtgtgtgtgtgtgtgtgtgtgtgtATCCTATTGATTCTGTTTCTATGTAAAGGGCTGCCTAATACAGGAACTTTTGC-TGGTCTTCCCTACCATAATTGATCTTATTCTACATTTCAACAAACCAATGCAATTTCTGTAAGTTGCTGTGTACATCCATTTCAATT i nomLeu3.chr21 M 2379 N 0 s rheMac8.chr6 81802210 1124 + 180051392 tatccccggtgaatgaaaataccttttatctgttttcatgaaggagatagaaagtgatatttgtcagatcatagatggaaaaccaagagtagaagctgagttgagttgttaaaataaagatactacatactatactacataatataaatacacagcaggtgagtcaggaattatcagttgcttagatttacatgattcccccatcatcacccagattcaaa-tttttgcacgtgtcattccaataaattaaatgaggatatgatagggacttcaactcctgca-ccctttTTATTTTTGAGAATATTGTTATCGCTGCCATCTTATTTGCTGCTGATTTTGTGTTTTCATTACTGGGTAGACAGC-TTTCATTAGAGAATGTGATGGTTCATTTTATGTTAACCATTTATGTTTTATTTTACCATTTCCAATCCCATTTT--GTTTTATTACTTATGTGTATAAATTTTCATTGACTGGCTTATTAGACACCCAGAAAGct----gtgaaattgatgttggaggaacttagcatttgaatcagtaaactgagtcaagatcatctgcccttaccagtgtgggcaggcatcatgcagtctttgaaggccagaatagagcaaaatggcagaggtaaggcaaatttgctttctcttcta-taacagcaatatcaatcttctcttcccctgaggagctcccggtttttgagcctttggatgccagtac-ttacaccattgactctcctggttctcagtcttcagactcattgaattacaccactggctttactggttctccggagtgcagatggc--atatcaggggccttcttgcatcccataattgtgtgagccaattctcacaataaattttctttatttatctctctgtc--tctctctctc--tctgtctctctctctcagtctgtctctctctctctct---ctATTCCTC--------tgtgtgtgtgtg--tgtgtgtgtgtgtct--------gtgtgtgtgtttatgtgtgtatgcatcctattgattctatttctttgaaaagcgctgcctaatacaGGAACTTTTGCTTGGTCTTCCCTAACATAATTGATCTTATTCCACATTTCAGCAAACCAATGCAATTTCTGTAACTTGCTATGTACATCCATTTTAATC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17429543 1108 - 20287406 tatccccagtgaatgaaaataccttttatctgttttcatgaaggagatagaaagtgatatttgtcagatcatagatggaaaaccaagagtagaagctgagttgagttgttaaaataaagatactacatactatactacataatataaatacacagcaggtgagtcaggaattatcagttgcttagatttacatgattcccccatcatcacccagattcaaa-tttttgcacgtgtcattccaataaattaaatgaggatatgatagggacttcaactcctgca-ccctttTTATTTTTGAAAATATTGTTATCGCTGCCATCTTATTTGCTGCTGATTTTCTGTTTTCATTACTGGGTAGACAGC-TTTCATTAGAGAATGTGATGGTTAATTTTATGTTAACCATTTATGTTTTATTTTACCATTTCCAATCCCATTTT--GTTTTATTACTTATGTGTATAAATTTTCATTGACTGGCTTATTAGACACCCAGAAAGct----gtgaaattgatgttggaggaacttagcatttgaatcagtaaactgagtcaagatcatctgcccttaccagtgtgggcaggcatcatgcagtctttgaaggccagaatagagcaaaatggcagaggtaaggcaaatttgctttctcttcta-taacagcaatatcaatcttctcctcccctgaggagctcctggtttttgagcctttggatgccagtac-ttacaccattgactctcctggttctcagtcttcagactcattgaattacaccactggctttactggttctccggagtgcagatggc--atatcaggggccttcttgcatcccataattgtgtgagccaattctcacaataaattttctttatttatctctctgtc--tctctctctc--tc----------------tcagtctctctctctctct---ctattcctc--------tgtgtgtgtgtg--tgtgtgtgtgtgtct--------gtgtgtgtgtttatgtgtgtatgcatcctattgattctatttctttgaaaagcgctgcctaatacaGGAACTTTTGCTTGGTCTTCCCTAACATAATTGATCTTATTCCACATTTCAGCAAACCAATGCAATTTCTGTAACTTGCTATGCACATCCATTTTAATC i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79052174 1102 + 91010382 tattcctggtgaatgaaaataccttttatctgttttcgtgaaggagatagaaagtgatatttgtcagatcatagacggaaaaccaagagtagaagctgagttgagttgttaaaataaagatactatatactatactacataatataaatacacagcagatgagtcaggaattatcagttgcttagatttacatgattcccccatcatcacccagattcaaa-tttttgcatgggtcattccagtaaattaaatgaggatgtgatagggacttcgactcctgca-ccctttttatttttgagaatgttgttatcgctgccatcTTATTTGTTGCTGATTTTCTGTTTTCATTACTGGGTAGACAGC-TTTTATTAGAGAATGTGATGGTTAATTTTATGTTAACCATTTATGTTTTATTTTACCATTTCCAATCCCATTTTAAGTTTTATTACTTATGTATGTAAATTTTCATTGACTGGCTTATGTGATACCCAGAAAAct----gtgagattgatttgggaggaacttagcatttgaatcagtaaactgagtcaagatcatctgccctttccagtgtgggcaggcatcatgcagtctttgaaggctggaatagaacaaaatggcagaggaagggcaaatttgctttctcttcta-taacagcaatatcaatcttctcttcccctgaggagctcccggtttttgagcctttggatgccagtactttacaccattgactctcctggttctcagtcttcagactcattgaattacaccactggctttactggttctccagagtgcagatgac--atatcaggggccttcttgcatcccataattgtgtgagccaattctcacaataaattttctttatttctctctctctc--tctctctctc--tc--------------------tctctctctctctct----TATTCCTC------------tgtgtgtg--tgtgtgtgtgtgtct--------gtgtgtgtgtttatgtgtgtatgcatcctattgattctgtttctttgaacagcgctgcctaatacaGGAActtttgcttggtcttccctaccataattgatcttattccacatttcagcaaaccaatgcaatatctgtaacttgctatgtacatccattttaatc i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3454806 1120 + 21726897 tatccctggtgaatgaaagtatcttttatctgttttcatgaaggagatagaaagtgatatttgtcagatcatagatggaaaaccaagggtagaagctgagttgagttgttaaaataaagatactatatactatactacataatataaatacacagcagatgagtcaggaattatcagttgcttagatttacatgattcccccatcatcacccagattcaaa-attttttatgagtcattccagtaaattaaatgacgatgtgatagggacttcgactcctgca-ccctttttatttttgaGAATATTGTTATCGCTGCCGTCTTATTTGTTGCTGATTTTCTGTTTTCATTACTGGGTAGACAGCTTTTTATTAGAGAATGTGATGGTTAATTTTATGTTAACCATTTATGTTTTATTTTACCATTTCCAATCCCATTTTATGTTTTATTACTTATGTATATAAATTTTCATTGACTGGCTTATGGGATAACCAGAAAAct----gtgagattgattttggaggaacttagcatttgaatcaataaactgagtcaagatcatctgcccttaccaatgtaggcaggcatcatgcaatctttgaaggccggaatagaacaaaatggcagagaaagggcaaatttgcgttttcttcta-taacagcaatatcaatcgtctcttcccctgaggagctccaggttgttgagcttttggatgccagtac-ttacaccattgactctcctggttctcagtcttcagactcattgaattacaacactggctttactggttctccagagtgcagatggc--atatcaggggccttcttgcatcccgtaattgtgtgagacaattctcacaataaattttctttatttatctctctgtc--tctctctctg--tc--------------tgtctgtctctctCTCTCTCCCCTCTATTCCTCtg--tgtgtgtgtgtgtgtg--tgtgtgtgtgtgtct--------gtgtgtgtgtttatgtgtgtATGCATCCTATTGAT--TGTTTCTTTGAAAAGCGCTGCCTAATACAGGAATTTTTGCTTGGTCTTTCCTAACATAATTGATCTTATTCCACATTTCAGCAACCCAATGCAATTTCTGTAACTTGCTGTGTACATCCATTTTAATC i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81147678 1082 - 204313951 tatccctgatgaatgaaaataccttttatctgttttcttgaagtggatagaaagtgatatttgtcagattatagatgcaaaatcaagattagaagctgcattgagctgttaaaataatg------------atactacataatctaaatacacaacagatgcatttggaattacgagttgcttagatttacatgattcccccatcatcctccagattcaaa-tttttgcatgagtcattcaagtaaattaaatg-ggatatgatagggacttcaacgcctgcgttcctttttatctttgaggatgttattatcgctgccatcTTATTTGTTGCTGATTTTCTATTTTCATTACTGGATAGACAGC-TTTTATTAGAGAATGTAATGGTTAATTTTATGTTAACTATTTATGTTTTATTTTATCATTTCCTATTCCATTTTATGTTTTATTACTCTTATATATAAGTTTTCCTTGACTGGCTTCCAGGATATCCAGGAAACTGTGAgtgagactgattttggaggaacttagcatttgaatcagtaaactgagtaaagatgatctgcctttatcaatgtgggcaggcattatgcaatctttgaaggccagaatagaacaaaatgtcagaggaaagccaaatttgctttctcttctgataacagcgatatccatc-tctcttcccctgtggagttctaggtttgtgagcctttggatgctaggac-ttacaccactgactctcctgattctcaatct--ggactcattgagttacaccactggctttcctgattctccagctcacaaacggcatatatcatgggagttcttgtcttctataattgtctgagccaattcttgcaataagttttctttatctatctctCTGCc--tctctt------tc--------------------tcgctgtctatccct---ctgtctctctctctctttcACtgtg-----------------------------gtgtgtgtgtgtgtgtgtgtgtgtgtCCTATTGATTCTGTTTCTTTGAAAAGCACTTCCTAATACAGGAActtttgcttggtcctccctaccataattgatcttattctacatttcagcaaaccaatgcagtttctgtaagttgctatgtatat-catttcaatt i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16147388 1099 - 71252344 tatccctggtgaatgaaaataccttttatctgttttcatgaagtggatagaaagtgatacttgtcatatcatagatgcaaaatcaagaatagctgctgcattgaactgttaaa-----g------------acactacataatctaaatacacaacagatgcatttggaattaccagttgcttagatttacatgattcccccatcatcctccagattcaaattttttgcatggttcattccagtaaattaaatg-ggatatgaaagggacttcaactcctgca-tcctttttatctttGCAAATGTTATTATCACTGCCATCTTGTTTGTTGCTGATTTTCTATTTTCATTACTGGGTAGACAGC-TTTTATTACAGAATGTGATGGTTAATTTTCTGTTAACCATTTATGTTTTATTTTACCATTTCCTGTTCCATTTTATGTTTTATTACTTTTATATATAAGTTTTCCTTGACTGGCTTACAGGATATCCAGAAAAct----gtgagactgattttggagggacttagcatttgggtcagtaaactgagtaaagatgatctgcccttatcagtgtgggcaggcatcacgcaatctttgaaggccagaatagaacaaaatgtcagaggaaagccaaatttgctttctcttctg-taacagccatatccatc-tctctttccttgaggagctctaagtttgtgagcctttggatgctgggac-ttacaccactgactctcctgattctcagtct--ggactcattgaattagaccactggctttcctgattctccagctcaccaacggcatatatcatgggacttcttgtcttccataattctgtgagccaattctcacaataagttttctttatctctctgtctctt--tttctt------gc--------------------tctgtctctATCCCT---CTGTCTCTCTCTCTCTTTCACtgtgtgtg--tgtgtgggtgtgtgtgtttgtgtgtgtgtgtctgtgtctgtgtgtgtATCCTATTGATTCTGTTTCTTTGAAAAGTGCTTCCTAATACAGGAActtttgcttggtcttccctaccataaatgatcttattctacgtttcagcaaaccaatgcagtttctgtaagttgctgtgtatat-catttcaatt i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5490694 1094 + 12262279 tatccctggtgaatgaaaataccttttatctgttttcatgaagtggatagaaagtgatattcgtcagatcatagatacaaaatcaagagtagaagctgcattgaact-ttaaaataaag------------atactacataaacgaaatatacaacagatgtatttggaattaccagttgcttagatttacatgattcccccatcatcttccagattcaaa-tttttgcatggttcattccagtaaaataaatg-gggtatgatagggacttcaactcctgca-tcctttttatctttgaGAATGTTATTATCAGTGCCGTCTTATTTGTTGCTGATTTTCTATTTTCATTACTGGGTAGACAGC-TTTTATTAGAGAATGTGATGGTTAATTTTATGTTAACCATTTATGTTTTATTTTACCATTTCCTGTTCTATTTTATGTTTCATTA-TTTTATATATAAGTTTTCCTTGACTGGCTTACAGGATATCCAGAAACct----gtgagactgattttggagggacttggcatttgagtcagtaaactgagtaaagatgatctgcccttatcagtgtgggcaggcattatgcaatctttgaaggccagaatagaacaaaatgtcagaggaaagccaaatttgctttctcttctg-taacagcaatatccatc-tctcttcccctgaggagctttaggtttgtgagcctttggatgttaggac-ttacactactgacccttctgattctcagtct--agactcattgaattacaccactggctttcctgactctccagctcgcaaacggcatatatcgtgggacttcttgtcttccataattgtgtgaaccaattctcacaataagttttctttgtctatctctctgtc--tctctttctcactc--------------------tctgtctctATCCCT---CTGTCTCTTTCTATCTTTCACTGTGTGTT--TCTGCgtgtgt------------gtgtgtgtgtgtgtgtgtgtATGTATCCTATTGATTCTGTTTCTTTGAAAAGCGCTTCCT-ATACAGGAActtttgcttggtcttccctaccgtaattgatcttgttctacatttcagcaaaccaatgcagtttctgtaagttgctatgtatat-catttcaatt i cebCap1.NW_016107331v1 C 0 C 0 s aotNan1.NW_018506370v1 4177039 1063 + 15889662 tatccctggtgaatgaaaaaaccttttatc--tttccatggagtggatagaaagtgatatttgtcagatcatatttgcaaaatcaatagtagaagctgcattgagctgttaaaataaag------------atactacataatctaaatacacaacagatgcatttggaattaccatttgcttagatttacatgattcccccatcatcctccatattcaaa-tttttgcatgggtcattctagtaaattaaatg-gaatatgatagggacttcaactcctgcattcctttttatctttgaggatgttattattgctgccatctaATTTGTTGCTGATTTTCTATTTTCATTACTGGGTAGACAGC-TTTTATTAGAGAATGTGATGGTTAATTTTATGTTAACCATTTATGTTTTATTTTACCATTTCCTATTCCATTTTATGTTTTATTATTTTTATATGTAAGTTTTCCTTGACTGGCTTCCAGGATATCCAGAAAAct----gtgagactgattttagagggacttagcatttgaatcagtaaactgagtaaagatgatctgccctaatcagtgtgggcaggcattatgcaatctttgaaggccagaatagaacaaaatgtcagaggaaagccaaatttgctttctcttctg-taacagcgatatccatc-tctcttctcctgaggaactctacgtttgtgaacgtttggatgctaggac-ttac---------------------------------------------gccactggctttcctgattctccagctcgcaaacggcgtatatcatgggacttcttgtcttccataattgtgtgagccaattctcacaataagttttctttgtctatctctctgtc--tctctttcttgttc--------------------tctgtctctATCCCT---CTGTCTCTCTC--TCTTTCACtgtgtgtg--tgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtATCCTATTGATTCTGTTTCTTTGAAAAGTGCTTCCTAATAcaggaacttttgcttggtcttccctactataattgatcttattctacatttcagcaaaccaatgcagtttctgtaagttgctatgtatat-catttcactt i aotNan1.NW_018506370v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=1012376.000000 s hg38.chr3_KI270784v1_alt 144644 160 + 184404 ATGTCCTCGATGACCAGGGCAATGAACACAGGGTAGTTTAACAAACCCATTAGACTAATGTGAGAGAAAGGCGGACCAGAAAGCCATTTATCAGCTGATCCCTGAAAATTCCAATTATAATAGGTATCTTAATGGCATTTTTGTGTACCCTGGTATCAGT s panTro5.chr3 39356 160 - 202621043 ACGTCCTCGATGACCAGGGCAATGAACACAGGGTAGTTTAACAAACCCATTAGACTAATGTGAGAGAAAGGTGGACCAGAAAGCCATTTATCAGCTGATCCCTGAAAATTCCAATTATAATAGGTATCTTAATGGCATTTTTGTGTACCCTGGTATCAGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 32750 160 - 205426864 atgtccttgatgaccagggcaatgaacacagggtagtttaacaaacccattagactaatgtgagagaaaggtggaccagaaagccatttatcagctgatccctgaaaattccaattataataggtatcttaatggcatttttgtgtaccctggtatcagt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 51133 160 + 508821 atgtcctcgatgaccagggcaatgaacacaggttagtttaacaaacccattcgactaacgtgagagaaaggtggactagaaagccatttatcagctgatccctgaaaattccaattataataggtatcttaatggcatttttgtgtaccctggtatcagt i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 146654 160 - 123690457 atgtcctcgatgaccagggcaatgaacacacggtagtttaacaaacccatcagactaatgtgagagaaaggtggaccagaaagccattcatcagctgatccctgaaaattccaattataataggtatcttaatggcatgtttgtgtaccctggtatcagt i nomLeu3.chr11 N 0 C 0 s rheMac8.chr6 81803334 160 + 180051392 ATGTCCTTGATGATCAGGGCAATGAACACAGGGTAGTTTAATGAACCCATTAGACTAATGTAAGAGAAAGGTGGTCCAGGAAGCTATTTATCAGCCTATCCCTGAAAATTCCAATTATCATAGGTATCTTAATGGCATTTTTGTGTACCCTAATATCAGT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17430651 160 - 20287406 ATGTCCTTGATGATCAGGGCAATGAACACAGGGTAGTTTAATGAACCCATTAGACTAATGTAAGAGAAAGGTGGTCCAGAAAGCTATTTATCAGCCTATCCCTGAAAATTCCAATTATCATAGGTATCTTAATGGCATTTTTGTGTACCCTAATATCAGT i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79053276 160 + 91010382 atgtccttgatgatcagggcaatgaagacagggtagtttaatgaacccattagactaatgtaagagaaaggtggtccagaaagccatttatcagctgatccctgaaaattccaattatcataggtatcttaatggcatttttgtgtaccctggtatcagt i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3455926 160 + 21726897 GTGTCCTTGATGATCGGGGCAATGAACACAGGGTAGTTTAATGAACCCATTAGACTAATGTAAGAGAAAGATGGTCCAGAAAGCCATTTATCAGCTGATACCTGAAAATTCCAATTATCATAGGTATCTTAATGACATTTTTGTGTACCCTGGTATCAGT i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81148760 160 - 204313951 atgtcctctatgaccagggcaatgaacaaagggtactttaacagaaccattagactaatgtaagagaaaagtggaccagaaagccatttatcagctgatccctgaaaattccaattatagtaggtatcttaatggcatttttgtgtaccctggtatcagt i calJac3.chr2 C 0 I 1 s saiBol1.JH378106 16148487 159 - 71252344 atgttctctatgaccagggcaatgaacgaagggtactttagcagaaccattagactaa-gtaagagaaagatggaccagaaagtcatttatcagctgatccctgaaaattccaattatagtaggtatcttaatggcatttttatgtaccctggtatcagt i saiBol1.JH378106 C 0 I 1 s cebCap1.NW_016107331v1 5491788 160 + 12262279 atgtcctctatgaccagggcaatgaagaaagggtactttaacagaaccatttcactaatgtaagtgaaaggtggaccagaaagccatttgtcagctaatccctgaaaattccacttatagtaggtatcttaatggcatttttgtgtaccctggtatcagt i cebCap1.NW_016107331v1 C 0 I 1857 s aotNan1.NW_018506370v1 4178102 159 + 15889662 aagtcctctatgacca-ggcaatgaacaaagggtactttaacagaaccattagactaatgtaagagaaaggtggaccagaaagccatttatcagctgatccctgaaaattccaattatagtaggtatcttaatggcatttttgtgtaccctggtatcagt i aotNan1.NW_018506370v1 C 0 I 1 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=100586.000000 s hg38.chr3_KI270784v1_alt 144804 20 + 184404 GTCATCTAAGCCCTGGTATT s panTro5.chr3 39516 20 - 202621043 GTCATCTAAGCCCTGGTATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 32910 20 - 205426864 gtcatctaagccctggtatt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 51293 20 + 508821 gtcatctaagccctggtatt i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 146814 20 - 123690457 gtcatctaagccctggtatt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 81803494 20 + 180051392 GTCATCTCAGCCCTGGTATT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17430811 20 - 20287406 GTCATCTCAGCCCTGGTATT i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79053436 20 + 91010382 gtcatctcagccctggtatt i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3456086 20 + 21726897 GTCATCTCAGCCCTGGTATT i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81148921 20 - 204313951 gctatttcggccctgttatt i calJac3.chr2 I 1 C 0 s saiBol1.JH378106 16148647 20 - 71252344 gctatctcagccctgttatt i saiBol1.JH378106 I 1 C 0 s aotNan1.NW_018506370v1 4178262 20 + 15889662 gctatctcagccctcttatt i aotNan1.NW_018506370v1 I 1 C 0 e cebCap1.NW_016107331v1 5491948 1857 + 12262279 I e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=302459.000000 s hg38.chr3_KI270784v1_alt 144824 47 + 184404 TAAAAGTTCTTGAAAGATCTGGTGAAACTATCCCTAATTATAATAGT s panTro5.chr3 39536 47 - 202621043 TAAAAGTTCTTGAAAGATCTGGTGCAACTATCCCTAATTATAATAGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 32930 47 - 205426864 taaaagttcttgaaagatctggtGCAACTATCCCTAATTATAATAGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 51313 47 + 508821 taaaagttcttgaaagatctggtGCAACTATCCCTAATTATAATAGT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 146834 47 - 123690457 taaaagttcttgaaagatctggtGCAACTATCCCTAATTATAATAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 81803514 47 + 180051392 TAAACATTCTTGAAAGATCTGGTGTAAATATCCCTAATTATAATAGC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012016021v1 17430831 47 - 20287406 TAAACATTCTTGAAAGATCTGGTGCAAATATCCCTAATTATAATAGC i macNem1.NW_012016021v1 C 0 C 0 s chlSab2.chr4 79053456 47 + 91010382 taaacgttcttgaaagatctggtGCAAATATCCCTAATTATAATAGC i chlSab2.chr4 C 0 C 0 s colAng1.NW_012115488v1 3456106 47 + 21726897 TAAACATTCTTGAAAGATCTGGTGCAAATATCCCTAATTATAATAGC i colAng1.NW_012115488v1 C 0 C 0 s calJac3.chr2 81148941 47 - 204313951 taaaatttcttgaaagatctggtGCAACTATCCCTAATTATAATAGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16148667 47 - 71252344 taaaatttcttgaaagatctggtGCAACTATCTCTAATTATAATAGT i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5493805 47 + 12262279 TAAAATTTCTTTAAAGATCTGGTACAACTATCCCTAATTATAATAAT i cebCap1.NW_016107331v1 I 1857 C 0 s aotNan1.NW_018506370v1 4178282 47 + 15889662 taaaatttcttgaaagatctggTGCAACTATCCCTAATTATAATAGT i aotNan1.NW_018506370v1 C 0 N 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=190638.000000 s hg38.chr3_KI270784v1_alt 144871 39 + 184404 TTTAGAACATCTTTGGAGGTGGTTTTGGAAAGTAATTAT s panTro5.chr3 39583 39 - 202621043 TTTAGAACATCTTTGGAGGTGGTTTTGGAAAGTAATTAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 32977 39 - 205426864 TTTAGAACATCTTTGGAGGTGGTTTTGGAAAGTAATTAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 51360 39 + 508821 TTTAGAACATCTTTGGAGGTGGTTTTGGAAAGTAATTAT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 146881 39 - 123690457 TTTAGACCATCTTTGGAGGTGGCTTTGGAAAGTAATTAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 81803561 39 + 180051392 TTTAGGACATCTTTGGAGGTGGTTGTGGAAAGTAATTAT i rheMac8.chr6 C 0 N 0 s macNem1.NW_012016021v1 17430878 39 - 20287406 TTTAGGACATCTTTGGAGGTGGTTGTGGAAAGTAATTAT i macNem1.NW_012016021v1 C 0 N 0 s chlSab2.chr4 79053503 39 + 91010382 TTTAGGACATGTTTGGAGGTGGTTTTGGAAAGTAATTAT i chlSab2.chr4 C 0 N 0 s colAng1.NW_012115488v1 3456153 39 + 21726897 TTTAGGACATCTTTGGAGGTGGTTTTGGAAAGTAATTAT i colAng1.NW_012115488v1 C 0 N 0 s calJac3.chr2 81148988 31 - 204313951 --------GTCTTTGGAGGTGGTTTTGGAAATTAATTAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16148714 31 - 71252344 --------ATCTTTGGAGGTGGTTTTGGAAATTAATTAT i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5493852 31 + 12262279 --------ACCTTTGGAGGTAGTTTTGGAAATTAATTAT i cebCap1.NW_016107331v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=5096.000000 s hg38.chr3_KI270784v1_alt 144910 2 + 184404 TA s panTro5.chr3 39622 2 - 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chr3 33016 2 - 205426864 TA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 51399 2 + 508821 TA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 146920 2 - 123690457 TA i nomLeu3.chr11 C 0 C 0 s calJac3.chr2 81149019 2 - 204313951 TA i calJac3.chr2 C 0 C 0 s saiBol1.JH378106 16148745 2 - 71252344 TA i saiBol1.JH378106 C 0 C 0 s cebCap1.NW_016107331v1 5493883 2 + 12262279 TA i cebCap1.NW_016107331v1 C 0 N 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=5001.000000 s hg38.chr3_KI270784v1_alt 144912 3 + 184404 CAT s panTro5.chr3 39624 3 - 202621043 TAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 33018 3 - 205426864 TAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 51401 3 + 508821 TAT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 146922 3 - 123690457 TAT i nomLeu3.chr11 C 0 C 0 s calJac3.chr2 81149021 3 - 204313951 TAT i calJac3.chr2 C 0 N 0 s saiBol1.JH378106 16148747 3 - 71252344 TAT i saiBol1.JH378106 C 0 N 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=1568825.000000 s hg38.chr3_KI270784v1_alt 144915 1763 + 184404 CATTTAGgcaaaggtatggatgtaaatgtgccatgcaaatactaaccctacatggtgtgcccatattaatattagataaagtggtcttcaaaacaggagtactgccaaagataaaggtgtcaggtcataatcaaaaaaggccagttcataaaattaacaatcttaaatggatgaacctaatgaaacttcaaaatgtgaaacagacatcaacagagtaaaggTGATGATAATCAGATCTActtttcaaatgtctgtggaacattaatcaagatagatcaagtactggaccatcaaataattctcactaaatataaaagaaattaaatcatagacagtttgtgctctgagcaaaacaggactaaattaaaaatcaataacaaaaatatgttcagaaaaaccttaatatttggcaactgagcaaataacttttaaataacaatggatATAGAAATAATTATCAGATCTGTATTTAAATTTTTTAATTGTGTTAAAattttaacaattttaagtacataattcatagcattaagtacattcccagtgttgtacaaccagcatctccatttccatcacaaaaagaaataaagtaccctt-aaacagtaactcaccattacttcctctccccagtctctggtaaacactaatcttcattctgtcttcacagatttgcctgttctagatatttcatatcagcagaatcatacaacatttgtcatttcatgtctggtttacttcactcagcatcatgtttccaagtttcacccatgttgcatgtatcagaacttcatcccctttaatggctgaataatattctattatttatgtattatattttgtgtatccattc----gttgatggacaagggttgtctc-------tggctatggcgaataatgctgcaattaactttggtgtaaaaatatctgttcaagaccctgctgtcaacttttttgtgtatcatacctaggagtggaatttctggttctctgtgtgattctgtgaggaagtaccaaattgtttttcacagcaagtgcatcattttctattcctagcagccagttcatgagggctccaatttctccacctccttagcaacatttattttctgtgtcgttgttatgaaagccatactagtggaagcaaagtggcatctcattttggtttggttttccattttatcaatgaataatggtgttgagcatcttttcttgttcttattagacatttgtttatcttctttggagaaacgtctattcaggtcctttgcctattttttaattgggatgttagaaattctgttgttgagttttgagatattaagcttttatcagatacacat----------------------ttttcttttatcagatacatattttctcacatactatgggttgtcttttcatttccttgatagtgtcctttgatgcatgaaagtttttgattaaatctaacttatgtattttttcttttgttatctgtgcttttctgtcatatttcaaaaaacacttaagactcaaaggtcatgaaggttt-cctgtgtgttttcgtccaagagttacacattttagtccttatatttaagtcttctgttaatttagagttaatttttgtatatagtgcaaggcaagggtctaacttctctcctgtgcactgatacccagctgttgaacagactgttcattcctccattgactggtcttggcccccttgttgaacagtcgtcgaccatatatgtgaagactaatttctaggatctcaattctattctattggtctaaatgtcaa s panTro5.chr3 39627 1769 - 202621043 CATTtaggcaaaagtatggatgtaaatgtgccatgcaaatactaaccctacatggtgtgcccatattaatattagataaagtggtcttcaaaacaggagtactgccaaagataaaggtgtcaagtcataatcaaaaaaggccagttcataaaattaacaatcttaaatggatgaacctaatgaaacttcaaaatgtgaaacagacatcaacagagtaaaggTGATGATAATCAGATCTActtttcaaatgtctgtggaacattaatcaagatagatcaagtactggaccatcaaataattctcactaaatataaaagaaattaaatcatagacagtttgtgctctgagcaaaacaggactaaattaaaaatcaataacaaaaatatgttcagaaaaaccttaatatttggcaactgagcaaataacttttaaataacaatggatATAGAAATAATTATCAGATCTGTATTTAAA-TTTTTAATTGTGTTAAAattttaacaattttaagtacataattcatagcattaagtacattcccagtgttgtacaaccagcatctccatttctatcacaaaaagaaataaagtaccctt-aaacagtaactcaccattacttcctctccccagtctctggtaaacactaatcttcattctgtcttcacagatttgcctgttctagatatttcatatcagcagaatcatacaacatttgtcatttcatgtctggcttacttcactcagcatcatgtttccaagtttcacccatgttgcatgtatcagaacttcatcccctttaatggctgaataatattctattatttatgtattatattttgtgtatccattc----gttgatggacaagggttgtctctgccttttggctatggcgaataatgctgcaattaactttggtgtaaaaatatctgttcaagaccctgctgtcaacttttttgtgtatcatacctaggagtggaatttctggttctctgtgtgattctgtgaggaagtaccaaattgtttttcacagcaagtgcatcattttctattcctagcagccagttcatgagggctccaatttctccacctccttagcaacatttattttctgtgtcgttgttatgaaagccatactagtggaagcaaagtggcatctcattttggtttggttttccattttatcaatgaataatggtgttgagcatcttttcttgttcttattagacatttgtttatcttctttggagaaatgtctattcaggtcctttgcctattttttaattgggatgttagaaattctgttgttgagttttgagatattaagcttttatcagatacacat----------------------tttgcttttatcagatacatattttctcacatactatgggttgtcttttcatttccttgacagtgtcctttgatgcatgaaagtttttgattaaatctaacttatgtattttttcttttgttatctgtgcttttctgtcatatttcaaaaaacacttaagactcaaaggtcatgaaggttt-cctgtgtgttttcgtccaagagttacacattttagtccttatatttaagtcttctgttaatttagagttaatttttgtatatagtgcaaggcaagggtctaacttctctcctgtgcactgatacccagctgttgaacagactgttcattcctccattgactggtcttggcccccttgttgaacagtcgtcgaccatatatgtgaagactaatttctaggatctcaattctattctattgctctaaatgtcaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 33021 1770 - 205426864 CATTTAGgcaaaagtatggatgtaaatgtgccatgcaaatactaaccctacatggtgtgcccatattaatattagataaagtggtcttcaaaacaggagtactgccaaagataaaggtgtcaagtcataatcaaaaaaggccagttcataaaattaacaatcttaaatggatgaacctaatgaaacttcaaaatgtgaaacagacatcaacagagtaaaggTGATGATGATCAGATCTActtttcaaatgtctgtggaacattaatcaagatagatcaagtactggaccatcaaataattctcactaaatataaaagaaattaaatcatagacagtttgtgctctgagcaaaacaggactaaattaaaaatcaataacaaaagtatgttcagaaaaaccttaatatttggcaactgagcaaataacttttaaataacaatggatATAGAAATAATTATCAGATCTGTATTTAAATTTTTTAATTGTGTTAAAattttaacaattttaagtacataattcatagcattaagtacattcccagtgttgtacaaccagcatctccatttctatcacaaaaagaaataaagtaccctt-aaacagtaactcaccattacttcctctccccagtctctggtaaacactaatcttcattctgtcttcacagatttgcctgttctagatatttcatatcagcagaatcatacaacatttgtcatttcatgtctggcttacttcactcagcatcatgtttccaagtttcacccatgttgcatgtatcagaaattcatcccctttaatggctgaataatattctattatttatgtattatattttgtgtatccattc----gttgatggacaagggttgtctctgccttttggctatggcgaataatgctgcaattaactttggtgtaaaaatatctgttcaagaccctgctgtcaacttttttgtgtatcatacctaggagtggaatttctggttctctgtgtgattctgtgaggaagtaccaaattgtttttcacagcaagtgcatcattttctattcctagcagccagttcatgagggctccaatttctccacctccttagcaacatttattttctgtgtcgttgttatgaaagccatactagtggaagcaaagtggcatctcattttggtttggttttccattttatcaatgaataatggtgttgagcatcttttcttgttcttattagacatttgtttatcttctttggagaaatgtctattcaggtcctttgcctattttttaattgggatgttagaaattctgttgttgagttttgagatattaagcttttatcagatacacat----------------------tttgcttttatcagatacatattttctcacatactatgggttgtcttttcatttccttgacagtgtcctttgatgcatgaaagtttttgattaaatctaacttatgtattttttcttttgttatctgtgcttttctgtcatatttcaaaaaacacttaagactcaaaggtcatgaaggttt-cctgtgtgttttcgtccaagagttacacattttagtccttatatttaagtcttctgttaatttagagttaatttttgtatatagtgcaaggcaagggtctaacttctctcctgtgcactgatacccagctgttgaacagactgttcattcctccattgactggtcttggcccccttgttgaacagtcgtcgaccatatatgtgaagactaatttctaggatctcaattctattctattgctctaaatgtcaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 51404 1771 + 508821 cacttaggcaaaagtatggatgtaaatgtgccatgcaaatactaaccctacatggtgtgcccatattcatattagacaaagtggtcttcaaaacaggagtactgccaaagataaaggtgccaagtcataatccaaaaaggccagctcataaaattatcaatcttaaatggatgaacctaatgaaacttcaaaatgtgaaacagacatcaacagagtaaaggTGATGATAATCAGATCTActtttcaaatgtctgtggaacattaatcaagatagatcaagtactggaccatcaaataattctcactaaatataaaagaaattaaatcatagacagtttgtgctctgagcaaaacaggactaaattaaaaatcaataacaaaaatatgttcagaaaaaccttaatatttggcaactgagcaaataacttttaaataacaatggatATAGAAATAATTATCAGATCTGTATTTAAATTTTTTAATTGTCTTAAAattttaacaattttaagtacataattcatagcattaagtacattcccagtgttgtaaaaccagcatctccatttctatcacaaaaagaaataaagtacccttaaaacagtaactcaccattacttcctctccccagtctctggtaaacactaatcttcattctgtcttcacagatttgcctgttctagatatttcatatcagcagaatcatacaacatttgtcatttcatgtctggcttacttcactcagcatcatgtttccaagtttcacccatgttgcatgtatcagaacttcatcccctttaatggctgaataatattctattatttatgtattatattttgtgtatccattc----gttgatggacaagggttgtctctgccttttggctatggcgaataatgctgcaattaactttggtgtaaaaatatctgttcaagaccctgctgtcaacttttttgtgtatcatacctagaagtggaatttctggttctctgtgtgattctgtgaggaagtaccaaattgtttttcacagcaagtgcatcattttctgttcctagcagccagttcatgagggctccaatttctccacctccttagcaacatttattttctgtgtcgttgttatgaaagccatactagtggaagcaaagtggcatctcattttggtttggttttgcattttatcaatgaataatggtgttgagcatcttttcttgttcttattagacatttgtttatcttctttggagaaatgtctattcaggtcctttgcctattttttaattgggatgttagaaattctgttgttgagttttgagatattaagctgttatcagatacacat----------------------tttgcttttatcagatacatattttctcacatactatgggttgtcttttcatttccttgatagtgtcctttgatgcatgaaagtttttgattaaatctaatttatgtattttttctcttgttatctgtgcttttctgtcatatttcaaaaaacacttaagactcaaaggtcataaaggttt-cctgtgtgttttcgtccaagagttacacattttagtccttatatttaagtcttctgttaatttagagttaatttttgtatatagtgcaaggcaagggtctaacttctctcctgtgcactgatacccagctgttgaacagactgttcattcctccattgactggtcttggcccccttgttgaacagtcgttgaccatatatgtgaagactaatttctaggatctcaattctattctattggtctaaatgtcag i gorGor5.CYUI01015884v1 C 0 I 367 s nomLeu3.chr11 146925 1779 - 123690457 CATTtaggcaaaagtatggatgtaaatgtgccatgcaaatactaaccgtacatggtgtgcccatattaatattagataaagtggtcttcagaac---agtactgccaaagataaaggtgtcaagtcataatcaaaaaaggccagtttataaaattaacaatcttaaatgggtgaacctaatgaaacttcaaaatgtgaaacagacatcaacagagtaaaggTGATGATAATCAGATCTAGttttcaaatgtctgtggaacattaaccaagatagatcaagtactggaccataaaacagttctcattaaatataaaagaaattaaatcatagacagtttgtgctctgagcaaaacaggactaaattaaaaatcaataacaaaaatatgttcagaaaaaccttaatatttggcaactgagc-----------aaataacaatggatatagaaataattctcaGATCTGTATTTAAATTTTTAAATTGTGTTAAAattttaacaattttaagtatataatgcatagcattaagtaccttcctagtgttgtacaatcagcatctccatttctaccacaaaaagaaataaagtaccctt-aaacagtaactcaccattacttcctctccccagtctctggtaaacactaatcttcattctgtcttcacagatttgcctgttctagatatttcttatcagcagaatcatacaacatttgtcgtttcgtgtctggcttaattcactcggcatcatgtttccaagtttcacccatgttgcatgtatcagaacttcatcccctttgaaggctgaataatattctattatttatatattatattttctgtatccattcatttgttgatggacaagggttgtctctgccttttggctatggcgaataatgttgcaattaactttggtgtaaaaatatctgttcaagaccctgctgtcaacttttttgtgtatcatacctatgagtggaatttctgggtctctgtgtgattctgtgaggaaccaccaaaacgttttccacaacaactgcatcattttctattcctagcggccagttcaggagggctccaatttctccacctccttagcaacacttattttctgtgtcgttgttatgaaagccatactagtggaagcaaagtggcatctcattttggttttgttttgcattttattaatgaataatggtgttgagcatcttttcttgttcttattagacattcgtgtatcttctttggagaaatgtctattcaagtcctttgcctattttttaattgggatgttagcaattctgttgctgagttttgagatatgatgcttttatcagatgcacattttgcttttatcagatatacactttgcttttatcagatacatattttctcacatactatgggttgtcttttcactttcttgatagtgtcctttgatgcattaaagtttttgattaaatctaatttctgtatttttctt----ttatctgtgcttttctgtcatatttcaaaaaacacttaagactcaaaggtcacgaaggtttccctgtgtgttttcgcctaagagttacacattttagtccttacatttaagtcttttgttaatttagagttaatttttgtatacagtgcaagacaagggtctaacttctctcctgtgcactgatacccagctgttgaagagactgttctttcctcctttgactggtcttggcccccttgttgaacagtcgttgaccatatatgggaagactaatttctaggatctcaattctgttctattggtctaaatgtcta i nomLeu3.chr11 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=1028412.000000 s hg38.chr3_KI270784v1_alt 146678 1191 + 184404 ttggtcttatgccagtaaaacactctcttgattactgtagatttgtagcacgttgtgaatctggaaaatgtgagttttccaatgttctttttcaagatcgtttcatctatgtcagatcctttgagtttttgtatgaattttagaatgagtttctctgtttctgc-aaaaaatgtctttggggttttgatggtattgcattgaatctatagattactatagatggtattgacatattaacaatattgtcttacaatccatgaacacagaatatctttccagttatttcaactctctttagtttctttcagcaaagttttgtgtataccaccatagttagattgatgcctgaatatcttatttctggatgctattataaatgggattttaaaaatgttttgatagttcattacaactatatagaaataaaactaatttgcatatgtttgtcttgcatcctgcctattttattagttctaatgggttttgtgttttctttggagattcatagatatatgataatgtgtagatataattttacttct-ttttttatttctaatttagatgccttttatttctttgtcttgcctaatttctctggctagaactgccagtgctatgttgaatagaaggggcaaagtcaccatccttgccttgttctagatgttagggaaacagctttcagtgtttcatcattgagcatgatattaactgtcagttttttatatatcctagtgtcatattgcagaagttcctttctatgcctagtttattgagtatttttatcataaacgggtgttgtatttcatcaatgttttttctgcatcaactgaaataatcatgtgcttattcattttactattatagtatattacactgattttttttttttttttttttttttttttttgagacggagtttcgctcttgttgcccagactggagtgcaatggcgcgatctcggctttggtatcaggataatgctgttatcaaaaagtgaattagcaagtattccttcttcacacattttgtcggaaaagtttgggaagaaatggtgttaattcttc---aaatgttaggtagactcaccagttaatgaagctatttggtcataaatctttctttgttatatcgctttcgattactaattcaatctccttgtc------------tattcagattttctctttcttcttgagccatttt s panTro5.chr3 41396 1180 - 202621043 ttggtcttatgccagtaaaacactctcttgattactgtagatttgtagcacgttgtgaatctggaaaatgtgagttttccaatgttctttttcaagatcgtttcgtctatgtcagatcctttgagtttttgtatgaattttagaatgagtttctctgtttctgc-aaaaaatgtctttggggttttgatggtattgcattgaatctatagattactatagatggtattgccatattaacaatattgtcttacaatccatgaacacagaatatctttccagttatttcaactctctttagtttctttcagcaaagttttgtgtataccaccatagttagattgatgcctgaatatcttatttctggatgctattataaatgggattttaaaaatgttttgatagttcattacaactatatagaaataaaactaatttgcatatgtttgtcttgcatcctgcctcttttattagttctaatgggttttgtgttttctttggagattcatagatataagatcatgtgtagatataattttacttct-ttttttatttctaatttagatgccttttatttctttgtcttgcctaatttctctggctagaactgccagtgctatgttgaatagaaggggcaaagccaccatccttgccttgttctagatgttagggaaacagctttcagtgtttcatcattgaacatgatattaactgtcagttttttatatatcctagtgtcatattgcagaagttcctttctatgactagtttattgagta-ttttatcataaatgggtgttgtatttcatcaatgttttttctgcatcaactgaaataatcatgtgcttattcattttactattatagtatattacactga----------Atttttttttttttttttttgagacggagtttcgctcttgttgcccagactggagtgcaatggcgcgatctcggctttggtatcagggtaatgctgttatcaaaaagtgaattagcaagtattccttcttcacacattttgtcggaaaagtttgggaagaaatggtgttaattcttc---aaatgttaggtagactcaccagttaatgaagctatttggtcataaatctttctttgttaaatcgctttcgattactaattcaatctcctcgtc------------tattcagattttctctttcttcttgaGCCATTTT i panTro5.chr3 C 0 I 100 s panPan2.chr3 34791 1176 - 205426864 ttggtcttatgccagtaaaacactctcttgattactgtagatttgtagcacgttgtgaatctggaaaatgtgagttttccaatgttctttttcaagatcgtttcgtctatgtcagatcctttgagtttttgtatgaattttagaatgagtttctctgtttctgc-aaaaaatgtctttggggttttgatggtattgcattgaatctatagattactatagatggtattgccatattaacaatattgtcttacaatccatgaacacagaatatctttccagttatttcaactctctttagtttctttcagcaaagttttgtgtataccaccatagttagattgatgcctgaatatcttatttctggatgctattataaatgggattttaaaaatgttttgatagttcattacaactatatagaaataaaactaatttgcatatgtttgtcttgcatcctgcctcttttattagttctaatgggttttgtgttttctttggagattcatagatataagatcatgtgtagatataattttacttct-ttttttatttctaatttagatgccttttatttctttgtcttgcctaatttctctggctagaactgccagtgctatgttgaatagaaggggcaaagccaccatccttgccttgctctagatgttagggaaacagctttcagtgtttcatcattgagcatgatattaactgtcagttttttatatatcctagtgtcatattgcagaagttcctttctatgcctagtttattgagtatttttatcataaacgggtgttgtatttcatcaatgttttttctgcatcaactgaaataatcatgtgcttattcattttactattatagtatattacactga---------------attttttttttttttgagacggagtttcgctcttgttgcccagactggagtgcaatggcgcgatctcggctttggtatcaggataatgctgttatcaaaaagtgatttagcaagtattccttcttcacacattttgtcggaaaagtttgggaagaaatggtgttaattcttc---aaatgttaggtagactcaccagttaatgaagctatttggtcataaatctttcttcgttaaatcgctttctattactaattcaatctcctcgtc------------tattcagattttctctttcttcttgagccatttt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 53542 1181 + 508821 ttggtcttatgccagtaaaacactctcttgattacggtagatttgtagcacgttgtgaatctggaaaatgtgagttttccaatgttctttttcaagatcgttttgtctatgtcagatcatttgagtctttgtatgaattttagaatgagtttctctgtttctgcaaaaaaaggtctttggggtgttgatggtattgcattgaatctatagattactatagatggtattctcatattaacaatattgtcttacaatccatgaacacagaatatctttccagttatttcaactctctttagtttctttcagcaaagttttgtgtataccaccatagttagattgatgcctaaatatcttatttctggttgctattataaatgggattttaaaaatgttttgatagttcattacaactatatagaaacaaaactaatttgcatatgtttgtcttgcatcctgcctcttttattagttctaatgggttttgtgttttctttggagattcatacatataagatcatgtgtagatataattttacttct-ttttttatttctaatttagatgccttttatttctttgtcttgcctaatttctctggctagaactgccagtgctatgttgaatagaagtggcaaagccaccatccttgccttgttctagatgttagggaaacagctttcagtgtttcatcattgagcatgatattaactgtcagttttttatatatcctagtgtcatactgcagaagttcctttctatgcctagtttattgagtatttttatcataaacgggtgttgtatttcatcagtgttttttctgcatcaactgaaataatcatgtgcttattcattttactattatagtatattacactga-----------attttttttttgtttgtttgagacagagtttcgctcttgttgcccagactggagtgcaatggcgcgatctcggctttggtatcaggataatgctgttatcaaaaagtgaattagcaagtattccttcttcacacattttgtcggaaaagtttgggaagaaatggtgttaattcttc---aaatgttaggtagactcaccagttaatgaagctatttggtcataaatctttctttgttaaatcgcttttgattactaattcaatctccttgtc------------tattcagattttctctttcttcttgagccatttt i gorGor5.CYUI01015884v1 I 367 C 0 s nomLeu3.chr11 148704 1193 - 123690457 ttggtcttatgccagtaaaacactctcttgattactgtagatttgtagtacattgttaatctggaaaatgtgagttttccaatgttctttttcaagatcgttttgtctacgtcagatcctttgaatttttgtatgaattttagaatgagtttctctgtttctgc-aaaaaatgtctttggggttttgatggtattgccgtgaatctatagattactatagatggtattgtcatcttaacaatattatcttacaatccatgaacacagaatatctttccagtgattgcaactctctttagtttctttcagcaaagttttgtgtataccaccatagttagattgatgcctgaatatcttatttctggatgctattataaatgggattttaaaaatgttttgatagttcattacaactatatagaaataaaactaatttgcatatgtttgtcttgcatcctgcctctttaattagttctaatgggttttgtgttttctttggagcttcacacatataaaagcatgtgtagatataattttacttctattttttatttctaatttagatgccttttatttctttgtcttgcctaatttctctggctagaactgccagggctatgttgaatagaagcggcaaatgcaccatccttgtcttgttctagatgttaggaaaacagctttcagtgtttcatcattga-catgatattgactgtcagttttttatatatcctattgtcatattgcagaagttcccttctatgcctagtttat----tatttttatcataaacgggtgttgtatttcatcaatgttttttctgcatcaactgaaataatcatgtgcttatccattttactgttatagtatattacatttt---------ttttttttttttttttttttttagatggagtttcgctcttgttgcccacaatggagtgcaatggcgcgatctcagctttggcatcaggataatgctgttatcaaaaactgaattagcaagtattccttcttcatacattttgtcagaagagtttgggaagaaatggtattaattcttctttaaatgttaggtagactcaccagttaacgaagctatttgatcataaatctttctttgttaaatcgctttcaatcactaattcaatctccttgtctgttataggtcttattcagattttctctttcttcttgagctatttt i nomLeu3.chr11 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I a score=438016.000000 s hg38.chr3_KI270784v1_alt 147869 842 + 184404 ggtagtttgtgtctttctagcaattcatccatttcatccagggcacctaatttgttgttatacagttgttcacagtatagtcctataatccttttttatttctgtaaagttggtagtaatggtgccactttcatttatgattttaatactgagtcttccatcttttgctcagtaaatatagtgaaaggtttgatctttcaaagaatcaacttctagctatgtttatttcttccactgcttttcaaccttctattttatttatttatgctctaatctttattatttctttcgttcttccagctttggatttagtctttttttgttttttctactgcccgtaggtatagagtgaagttactgatttgaga-ttttttcttaaatgtagttgtttatagccatacattttcctttgaattctactttcactgtatgcaataagttttggtatgttttgtttttattttaatttgtctcaagatgttttataattttgcttgtgatttattccttcactcactgttagtttaagagtgtattctgtaattcccacatatttgtgaattttccagttttcattttttatgtatctgttgtttcttccattgtgattgtaaattatattttgtattatttcaaggttttaaaaatgattaggacatattttgtggacgaag--atatggcctatcctagagaaagttccatatccgcttgaaaagaatgtgtattctgctgttgttgggtggactgttctccatatgtgtattagctctaaatggcttatactgttgttcaggtcttccatttctcatcaagcttctatctggtttttctatccattaA-TT s panPan2.chr3 35967 840 - 205426864 ggtagtttgtgtctttctagcaattcacccatttcatccagggcacctaatttgttgtcatacagttgttcacagtatagtcctataatccttttttatttctgtaaagtgggtagtaatggtgccacttccgtttatgattttaatactgagtcttccatcttttgctcagtaaatatagtgaaaggtttgatctttcaaagaatcaacttttagctatgtttatttcttccactgcttttcaaccttctattttattgatttctgctctaatctttattatttctttcgttcttctagctttggatttagtctttttttgttttttctactgcccgtaggtatagagtgaagttactgatttgaga-ttttttcttaaatgtagttgtttatagccatacattttcctttgaattctactttcaccgtatgcaataagttttggtatgttttgtttttattttaatttgtctcaagatgttttataattttccttgtgatttattccttcactcactgttagttt--gagtgtatgctgtaattcccacatatttgtgaattttccagttttcattttttatgtatctgtagtttcttccattgtgattgtaaattatattttgtatgatttcaagcttttaaaaatgattaggacatattttgtggatgaag--atatggcctatcctagagaaagttccatatccgcttgaaaagaatgtatattctgctgttgttgagtggactgttctgcatatgtgtattagctctaaatggcttatactgttgttcaggtcttccatttctcatcaagcttctatctggtttttctatccattAA-TT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 54723 840 + 508821 ggtagtttgtgtctttctagcaattcatccatttcatccagggcacctaatttgttgttatacagttgttcacagtatagtcctataatcc-tttttatttctgtaaagttggtagtaatggtgccactttcatttatgattttaatactgagtcttccatcttttgctcagtaaatatagtgaaaggtttgatctttcaaagaatcaacttttagctatgtttatttcttccactgcttttcaaccttctattttattgatttatgctctaatctttattatttctttcgttcttctagctttggatttagtctttttttgttttttctactgcccgtaggtatagagtgaagttactgatttgaga-ttttttcttaaatgtagttgtttatagccatacattttcctttgaattctactttcactgtatgcaataagttttggtatgttttgtttttattttaatttgtctcaagatgttttataattttgcttgtgatttattccttcactcactgttagttt--gagtgtattctgtaattcccacatatttgtgaattttccagttttcattttttatgtatctgttgtttcttccattgtgattgtaaattatattttgtatgatttcaagcttttaaaaatgattaggacatattttgtggatgaag--atatggcctatcctagagaaagttccatatccgcttgaaaagaatgtatattctgctgttgttgggtggactgttctgcatatgtgtattagctctaaatggcttatactgttgttcaggtcttccatttctcatcaagcttctatttggtttttctatccattaATTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 149897 841 - 123690457 ggtagtttgtgtctttctagcaattcatccatttcatacagggcacataatttgttgttattcggttgttcacagtatagtcctataacccttttt--tttctgtaaagttggtagtaatggtgccactttcatttatgattttaatactgagtcttccatcttttgctcagtcaatatagtgaaagatttgatctttcaatgaattaacttttagctatgtttatttcttccactgcttttcaaccttctattttattgatttatgctctaatctttattatttcttttgttcttctagctttggatttagtctttttt--ttttttctactgcccttaggtatagagtgaagttactgatttgagatttttttcttaaatgtagttgtttatatccacatattttcctttgaattctactttcactgtattcagtaagttttggtatgttttgtttttattttaatttgtctcaagatgttttataatttcgcttgtgatttattccttcactcactggtagtttaagagtgtattgtgtaatttccacatatttgtgaattttccaattttcattttttatgtatctgttgtttcttccactgtgattgtaaattgtattttgtatcacttcaagcttttaaaaatgattaggatatattttgtggacgaagatatatggcctatcctagagaaagttccatatccgcttgaaaagaaggtatattctgctgttgttgggtggactgttctgcatatgtgtattagctctaaatggcttatactgttgttcaggtcttctatttctcatcaagcttctatctggtttttctatccattaa-tt i nomLeu3.chr11 C 0 I 1 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e panTro5.chr3 42576 100 - 202621043 I a score=152971.000000 s hg38.chr3_KI270784v1_alt 148711 570 + 184404 TTTTAATTTAttttattattattatactttaagttttagggtacatgtgcacaatgtgcaggttagttacatatgtatacatgtgtcatgctggtgtgctgcacccattaactcgtcatttagcattaggtatatctcctaatgctatccctcccccctccccccaccccaccacagtctccagagtgtgatattccccttcctgtgtccatgtgttctcattgttcaattcccacctatgagtgagaatatgtggtgtttggttttttgttcttgcaatagtttactgagaatgatgatttccaatttcatccatgtcc-tacaaaggacatgaactcatcattttttatggctgcatagcattccatggtgtatatgtgccacattttcttaatccagtctatcatcgttggacatttgggttgcttccaagtctttgctattgtgaatagtgctgcaataaacatacgtgtgcatgtgtctttatagcagcatgatttatagtcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccctg s panPan2.chr3 36807 571 - 205426864 TTTTAATATAttctattattattatactttaagttttagggtacatgtgcacattgtgcaggttagttacatatgtatacatgtgtcatgttggtgtgctgcacccattaactcgtcatttagcattaggtatatctcctaaagctatccctcctccctccccccaccccacaacagtccccagtgtgtgatgttccccttcctgtgtccatgtgttctcattgttcaattcccacctatgagtgagaatatgcagtgtttggttttttgttcttgtgatagtttactgagaatgatgatttccaatttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcatagcattccatggtgtatatgtgccacattttcttaatccagtctatcattgttgaacatttgggttgcttccaagtctttgctattgtgaatagtcctgcaataaacatacgtgtgcatgtgtctttatagcagcatgatttatagtcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccctg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 55563 567 + 508821 TTTTAATttattttattattattatactttaagttttagggtacatgtgcacaatgtgcag----gttacatatgtatacatgtgtcatgctggtgtgctgcacccattaactcgtcatttagcattaggtatatctcctaaagctatccctcctccctccccccaccccacaacagtccccagagtgtgatgttccccttcctgtgtccatgtgttctcattgttcaattcccacctatgagtgagaatatgcagtgtttggttttttgttcttgcaatagtttactgagaatgatgatttccaatttcatccatgtccctacaaaggacatgaactcatcattttttacggctgcatagcattctatggtgtacatgtgccacattttcttaatccagtctatcattgttggacatttgggttgcttccaagtctttgctattgtgaatagtgctgcaataaacatacgtgtgcatgtgtctttatagcagcatgatttatagtcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccctg i gorGor5.CYUI01015884v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr11 150738 1 - 123690457 I e panTro5.chr3 42576 100 - 202621043 I a score=278320.000000 s hg38.chr3_KI270784v1_alt 149281 513 + 184404 aggaatcgccacactgacttccacaagggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctattactccacatcctctccagcacctgttgtttcctgactttttaatgatcgccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtgatggtaagcatgttttcatgtg-ttttttggctgcataaatgtcttcttttgagaagtgtctgttcatgtccttcgcccactttttgatggggttgtt-ttttttttcttgtaaatttgtttgagttcattgtagattctgaatattagccctttgtccgatgagtaggttgcgaaaattttcttccattttgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttaatta-atcccatttgtcaattttggcttttgttgccattgcttttggtgttttagacatgaagtccttgcccaT s panTro5.chr3 42676 514 - 202621043 aggaatcgccacactgacttccacaatggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctattactccacatcctctccagcacctgttgtttcctgactttttaatgattgccattctaactggtgtgagatagtatctcattgtggttttgatttgcgtttctctgatggccagtgatggtaagcatgttttcatgtg-ttttttggctgcataaatgtcttcttttgagaagtgtctgttcatgtccttcacccactttttgatggggttgtg-ttttttttcttgtaaatttgtttgagttcattgtagattctgaatattagccctttgtcagatgagtaggttgcgaaaattttctcccattttgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagacatgaagtccttgcccaT i panTro5.chr3 I 100 C 0 s panPan2.chr3 37378 513 - 205426864 aggaatcgccacactgacttccacaatggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctattactccacatcctctccagcacctgttgtttcctgactttttaatgattgccattctaactggtgtgagatagtatctcattgtggttttgatttgcgtttctctgatggccagtgatggtaagcatgttttcatgtg-ttttttggctgcataaatgtcttcttttgagaagtgtctgttcatgtccttcacccactttttgatggggttgtg--tttttttcttgtaaatttgtttgagttcattgtagattctggatattagccctttgtcagatgagtaggttgcgaaaattttctcccattttgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagacatgaagtccttgcccaT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 56130 516 + 508821 aggaatcgccacactgacttccacaacggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgattgccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtgatggtgagaattttttcatgtgtttttttggctgcataaatgtcttcttttgagaagtgtctgttcatgtcctttgcccactttttgatggggttgtttttttttttcttgtaaatttgtttgagttcattgtagattctgaatattagccctttgtcagatgagtaggttgcgaaaattttcttccattttgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagacatgaagtccttgcccaT i gorGor5.CYUI01015884v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I e macFas5.chr6 16489 24429 - 181584905 I e nomLeu3.chr11 150738 1 - 123690457 I a score=3090.000000 s hg38.chr3_KI270784v1_alt 149794 2 + 184404 aa s panTro5.chr3 43190 2 - 202621043 aa i panTro5.chr3 C 0 C 0 s panPan2.chr3 37891 2 - 205426864 aa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 56646 2 + 508821 aa i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 150739 2 - 123690457 aa i nomLeu3.chr11 I 1 C 0 s macFas5.chr6 40918 2 - 181584905 ag i macFas5.chr6 I 24429 C 0 s aotNan1.NW_018507789v1 2488926 2 + 12154212 aa i aotNan1.NW_018507789v1 N 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I a score=10152.000000 s hg38.chr3_KI270784v1_alt 149796 3 + 184404 atg s panTro5.chr3 43192 3 - 202621043 atg i panTro5.chr3 C 0 C 0 s panPan2.chr3 37893 3 - 205426864 atg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 56648 3 + 508821 atg i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 150741 3 - 123690457 atg i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 20712 3 - 85730 atg i rheMac8.chrUn_NW_014858614v1 N 0 C 0 s macFas5.chr6 40920 3 - 181584905 atg i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 37086 3 + 4899514 atg i macNem1.NW_012020287v1 N 0 C 0 s aotNan1.NW_018507789v1 2488928 3 + 12154212 atg i aotNan1.NW_018507789v1 C 0 C 0 e cerAty1.NW_012005170v1 10597 25901 + 97742 I e manLeu1.NW_012101680v1 15363 21042 + 85016 I a score=2125772.000000 s hg38.chr3_KI270784v1_alt 149799 482 + 184404 aggtattgaagtgtccaactactactataaaactgcggggttatccttttgatcttgttaattttttcagctttactgaggtttaatagagaaataaaaattgcacatattcaaggtggacagtgtgatatgtttatat----atgcacattctgaaatgattaccaaaatgaagtcaattaacatgttaattacctcacataatagttacc-ttttcgtgtgcatgcatgggataagaaaacttaaCTCCATCCCCAGTGACTGCAGAGTGGCCATTCCAGCTGCTCCAGGCTCCGGCAGAGGAAGAGCGGGGCGGGTGGCACCACCAG--GGGGGCCCACA----------------GGCCTGGCGCGCACGCGTTCTGGAGCCCACCCAGACCATGCTCCGCCGCCTGGGCGCCCAAGCTGCAGTCGCCCTCTGTGTGCAGGCAACAACTGCCTGGTAACTCCCGAGCCTGCTCGCGCTCCCAGCATCGCAGAACCAGGGCC s panTro5.chr3 43195 479 - 202621043 aggtattgaagtgtccaactactactataaaactgcggggttatcctttcgatcctgttaattttttcagctttactgaggtttaatagagaaataaaaattgcacatattcaaggtggacagtgtgatgtgtttatat------gcacattctgaaatgattaccaaaatgaagtcaattaacatgttaattacctcacataatagttacc-ttttcgtgtgcatgcatgggataagaaaacttaaCTCCATCCCCAGTGACTGCAGAGTGGCCATTCCAGCTGCTCCAGGCTCCGGCAGAGGAAGAGCGGGGCGGGCGGCACCACCAG--GGGGGCCCACA----------------GGCCTGGCGCGCA-GCGTTCTGGAGCCCACCCAGACCATGCTCCGCCGCCTGGGCGCCCAAGCTGCAGTCGCCCTCTGTGTGCAGGCAACAACTGCCTGGTAACTCCCGAGCCTGCTCGCGCTCCCAGCATCGCAGAACCAGGGCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 37896 479 - 205426864 aggtattgaagtgtccaactactactataaaactgcggggttatcctttcgatcctgttaattttttcagctttactgaggtttaatagagaaataaaaattgcacatattcaaggtggacagtgtgatgtgtttatat------gcacattctgaaatgattaccaaaatgaagtcaattaacatgttaattacctcacataatagttacc-ttttcgtgtgcatgcatgggataagaaaacttaaCTCCATCCCCAGTGACTGCAGAGTGGCCATTCCAGCTGCTCCAGGCTCCGGCAGAGGAAGAGCGGGGCGGGCGGCACCACCAG--GGGGGCCCACA----------------GGCCTGGCGCGCA-GCGTTCTGGAGCCCACCCAGACCATGCTCCGCCGCCTGGGCGCCCAAGCTGCAGTCGCCCTCTGTGTGCAGGCAACAACTGCCTGGTAACTCCCGAGCCTGCTCGCGCTCCCAGCATCGCAGAACCAGGGCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 56651 494 + 508821 aggtattgaagtgtccaactactactataaaactgt-gggttatcctttcgatcctCTTAAttttttcagctttactgaggtttaatagagaaataaaaattgcacatattcaaggtggacagtgtgatgtgtttatat------gcacattctgaaatgattaccaaaatgaag-caattaacatgttaattacctcacataatagttacc-tttttgtatgCATGCATGGGAGAAGAAAACTTAACTCCATCCCCAGTGACTGCAGAGTGGCCATTCCAGCTGCTCCAGGCTCCGGCAGAGGAAGAGCAGGGCGGGTGGCACCACCAG--GGGGGCCCACAGGCCTGGGGCCCACAGGGCCTGGCGCGCACGCGTTCTGGAGCCCACCCAGACCATGCTCCGCCGCCTGGGCGCCCAAGCTGCAGTCGCCCTCTGTGTGCAGGCAACAACTGCCTGGTAACTCCCGAGCCTGCTCGCGCTCCCAGCATCGCAGAACCAGGGCC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 150744 487 - 123690457 aggtattgaagtgtccaactactactgtaaaactgtggggttatcctttcgatcctgttaAttttttcagctttactgaggtataatagagaaataaaaattgtacacattcaaggtgtacagtgtgatgtgtttatatctatatgcacattgtgaaatgatcaccaaaatgaagtcaattaacatgttaattacctcacataatagttaccttttttgtgtgcatgcgtgggataagaaaacttaaCTCCATCCCCAGTGACTGCAGAGTGGCCATTCCAGCTGCTCCAGGCTCCGGCAGATGAAGAGCGGGACGGGTGGCACCACCAG--CGGGGCCCACA----------------GGCCTGGTGCGGACGCATTCCGGAGCCCACCCAGACCATGCTCCGCCGCCTGGGCGCCCAAGCTACAGTCGCCCTCTGTGTGCAGGCAGCAACTGCCTGGCAACTCCCGAGCCTGCTCGCGCTCCCAGCATCGCAGAACCAGGGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 20715 475 - 85730 aggtattgaagtgtccaactactactatagaactgt-----tatcctttcaatcctgttaattttttcagctttactgaggtataatagagaaataaaaattgtacatattcaaggtgtacagtgtgatgtgtttatatctatatgcacattctgaaatgattaccaaaatgtagtcaatcaacgcgttaattacctcagataatagttact-tttttgtgtgcatgcgtgggataagaaaacttaaCTCCATCCCCGGTGACTTCAGAGTGGCCATTCCAGCTGCTCCAGGCTCCAGCAGAGGAGGAGCGGGGCGGGT-------CCAGTTGGGGGCCAACA----------------GGTCTGGCGCGCGCGCATTCCGGAGCCCACCCAGACCATGTTCCGCAGCCTGGGCGCCCAAGCTGCAGTC-CGCTCTGTGTGCAGGCAGCAGCCGCCTGGCAACTCCCGAGCCTGCTCGCGCTCCCAGCATCGCAGAACCAGGACC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 40923 475 - 181584905 aggtattgaagtgtccaactactactatagaactgt-----tatcctttcaatcctgttaattttttcagctttactgaggtataatagagaaataaaaattgtacatattcaaggtgtacagtgtgatgtgtttatatctatatgcacattctgaaatgattaccaaaatgtagtcaatcaacgcgttaattacctcagataatagttact-tttttgtgtgcatgcgtgggataagaaaacttaaCTCCATCCCCGGTGACTTCAGAGTGGCCATTCCAGCTGCTCCAGGCTCCAGCAGAGGAGGAGCGGGGCGGGT-------CCAGTTGGGGGCCAACA----------------GGTCTGGCGCGCGCGCATTCCGGAGCCCACCCAGACCATGTTCCGCAGCCTGGGCGCCCAAGCTGCAGTC-CGCTCTGTGTGCAGGCAGCAGCCGCCTGGCAACTCCCGAGCCTGCTCGCGCTCCCAGCATCGCAGAACCAGGACC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 37089 475 + 4899514 aggtattgaagtgtccaactactactatagaactgt-----tatcctttcaatcctgttaattttttcagctttactgaggtataatagagaaataaaaattgtacatattcaaggtgtaaagtgtgatgtgtttatatctatatgcacattctgaaatgattaccaaaatgtagtcaataaacgcgttaattacctcagataatagttact-tttttgtgtgcatgcgtgggataagaaaacttaaCTCCATCCCCGGTGACTTCAGAGTGGCCATTCCAGCTGCTCCAGGCTCCAGCAGAGGAGGAGCGGGGCGGGT-------CCAGTTGGGGGCCAACA----------------GGTCTGGCGCGCGCGCATTCCGGAGCCCACCCAGACCATGTTCCGCAGCCTGGGCGCCCAAGCTGCAGTC-CGCTCTGTGTGCAGGCAGCAGCCGCCTGGCAACTCCCGAGCCTGCTCGCGCTCCCAGCATCGCAGAACCAGGACC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 36498 475 + 97742 aggtattgaagtgtccaactactactatagaactgt-----tatcctttcaatcctgttaattttttcagctttactgaggtataatagagaaataaaaattgtacacattcaaggtgtaaagtgtgatgtgtttatatctatatgcacattctgaaatgattaccaaaatgtagtcaaacaacgcgttaattacctcagataatagttacc-tttttgtgtgcatgcatgggataagaaaacttaaCTCCATCCCCGGTGACTGCAGAGTGGCCATTCCAGCTGCTCCAGGCTCCAGCAGAGGAGGAGCGGGGCGGGT-------CCAGTTGGGGGCCAACA----------------GGCCTGGCGCGCTCGCATTCCAGAGCCCACCCAGACCATGTTCCGCAGCCTGGGCGCCCAAGCTGCAGTC-CGCTCTGTGTGCAGGCAGCAGCCGCCTGGCAACTCCCGAGCCTGCTCGCGCTCCCAGCATCGCAGAACCAGGACC i cerAty1.NW_012005170v1 I 25901 C 0 s manLeu1.NW_012101680v1 36405 474 + 85016 aggtattgaagtgtccaactactactatagaactgt-----tatcctttcaatcctgttaattttttcagctttactgaggtataatagagaaataaaaattgtacacattcaaggtgtaaagtgtgatgtgtttatatctatatgcacattctgaaatgattaccaaaatgtagtcaaacaacgcgttaattacctcagataatagttacc-tttttgtgtgcatgcgtgggataagaaaacttaaCTCCATCCCCGGTGACTGCAGAGTGGCCATTCCAGCTGCTCCAGGCTCCAGCAGAGGAGGAGCGGGGCGGGT-------CCAGTTGGGGGCCAACA----------------GGCCTGGCGCGCTCGCA-TCCGGAGCCCACCCAGACCATGTTCTGCAGCCTGGGCGCCCAAGCTGCAGTC-CGCTCTGTGTGCAGGCAGCAGCCGCCTGGCAACTCCCGAGCCTGCTCGCACTCCCAGCATCGCAGAACCAGGACC i manLeu1.NW_012101680v1 I 21042 C 0 s aotNan1.NW_018507789v1 2488931 478 + 12154212 aggtattgaagtgtccaactattgctatagaactgtggttttatcctttcaatgttgttaatAtttttagctttactgaagtataatagagaaataaaaattgtacatattcaagatgtacagtgtgatgtgtttatat------gcacattctgaaatgattaccaaaatgaagtcaattagcatgttaattacctcacaaaataattacc-tttttgtgtgCATGCGTGGGATAAGAAAAC--AACTTCATCCCTGCTGATTGCAGAATGGCCATTGCAGCTGCTCCAGGCTCCTGCAGAGGAGGAGTGGAGCGGATGGCATCATCAG--GGGGTCCCTCA----------------AGCCTGGCGCGCACGCATTCTGGAGGCCACCCAGACCATGCTCCACCGCCTGGGCGCGCAAGCTACGGTCGCCCTCTGTGTGCAGGCAGCAGCCGCCTGGCAACTTCCGAGCCCGCTGGCGCTCCCAGCATCGCAGAACCAGGGTC i aotNan1.NW_018507789v1 C 0 C 0 a score=725065.000000 s hg38.chr3_KI270784v1_alt 150281 136 + 184404 AGGTGTCCCGAGGGCTGCGGCCAAGCCAGGCATTCTGCC---CGGCGGCGGCTGCACAGGGGCGAGAACTGAGAACCAGCCGCTCAACCCCATC-GGGGTGAATGCCGAGTGCCCATGCCAGCGGCCTCGAACTCCCTGC s panTro5.chr3 43674 136 - 202621043 AGGTGTCCCGGGGGCTGCGGCCAAGCCAGGCATTCTGCC---CGGCGGCGGCTGCACAGGGGCGAGAACTGAGAACCTGCCGCTCAACCCCATC-GGGGTGAATGCCGAGTGCCCATGCCAGCGGCCTCGAACTCCCTGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 38375 136 - 205426864 AGGTGTCCCGGGGGCTGCGGCCAAGCCAGGCATTCTGCC---CGGCGGCGGCTGCACAGGGGCGAGAACTGAGAACCTGCCGCTCAACCCCATC-GGGGTGAATGCCGAGTGCCCATGCCAGCGGCCTCGAACTCCCTGC i panPan2.chr3 C 0 M 1183 s gorGor5.CYUI01015884v1 57145 136 + 508821 AGGTGTCCCGGGGGCTGCGGCCAAGCGAGGCATTCTGCC---CGGCGGCGGCTGCACAGGGGCGAGAACTGAGAACCTGCCGCTCAACCCCATC-GGGGTGAATGCCGAGTGCCCATGCCAGCGGCCTCGAACTCCCTGC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 151231 129 - 123690457 AGGTGTCCCGGGGGCTGCGGCCAAGCCAGGCATTCTGCC---CGGCGGCGGCTGCACAGGGGCGAGAACTGAGAACCTGCCGCTCAACCACATC--GGGTGACTGCCGAG------TGCCAGTGGCCCCGAACTCCCTGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 21190 139 - 85730 AGGTGTACCGGGGGCCGCGGCCAAGCCAGGCATTCTGCCCGGCGGCGGCGGCTGCACAGGGGCGAGAACTGAGAACCTGGCGCTCAACCCCATC-GGGGTGACTGCCTAGTGCCCATGCCAGCAGCCCCGAACTCCCTGC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 41398 139 - 181584905 AGGTGTACCGGGGGCCGCGGCCAAGCCAGGCATTCTGCCCGGCGGCGGCGGCTGCACAGGGGCGAGAACTGAGAACCTGGCGCTCAACCCCATC-GGGGTGACTGTCTAGTGCCCATGCCAGCAGCCCCGAACTCCCTGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 37564 139 + 4899514 AGGTGTACCGGGGGCCGCGGCCAAGCCAGGCATTCTGCCCGGCGGCGGCGGCTGCACACGGGCGAGAACTGAGAACCTGGCGCTCAACCCCATC-GGGGTGACTGCCTAGAGCCCATGCCAGCGGCCCCGAACTCCCTGC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 36973 139 + 97742 AGGTGTACCGGGGGCCGCGGCCAAGCCAGGCATTCTGCCTGGCGGCGGCGGCTGCACAGGGGCGAGAACTGAGAACCTGGCGCTCAACCCCATC-GGGGTGACTGCCTAGTGCCCATGCCAGCAGCCCCGAACTCCCTGC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3685517 136 - 108555830 AGGTGTCCCAGTGGCTGCGGACAAGCCAGGCATTCTGCT---CGGCGGCGGCTGCACAGGGGCGAGAACTGAGAACCCCTCATCAACCCCAATC-CGGGTGACTGCCAAGTGCCCATGCCAGCGACCCCGATCTCCCTCC i chlSab2.chr12 N 0 C 0 s manLeu1.NW_012101680v1 36879 139 + 85016 AGGTGTACCGGGGGCCGCGGCCAAGCCAGGCATTCTGCCCGGCGGCGGCGGCTGCACAGGGTCGAGAACTGAGAACCTGGCGCTCAACCCCATC-GGGGTGACTGCCTAGTGCCCATGCCAGCAGCCCCGAACTCCCTGC i manLeu1.NW_012101680v1 C 0 C 0 s aotNan1.NW_018507789v1 2489409 137 + 12154212 AGGTGTCCCGGTGGCTGCGGCCAAGCCAGGGATTCTGTC---CGGTGGCGGCTGCACAGGGGCGAGAACTGAGAACCTGCCGCTCAATCCCATCTCTAGTGACTGCCGAGTGCCCATGCCAGCGGCCTCGATTTCCCTGC i aotNan1.NW_018507789v1 C 0 C 0 a score=125809.000000 s hg38.chr3_KI270784v1_alt 150417 27 + 184404 GGTGGAGGAGTGGGGCGGGAGGTACGT s panTro5.chr3 43810 27 - 202621043 GGTGGAGGAGTGGGGCGGGAGGTACGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 57281 27 + 508821 GGTGGAGGAGTGGGGCGGGAGGTACGT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 151360 27 - 123690457 GGTGAAGGAGTGGGGCGGGAGGCACGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 21329 27 - 85730 GGTGGAGGAGTGGGGCGGCAGGCACGT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 41537 27 - 181584905 GGTGGAGGAGTGGGGCGGCAGGCACGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 37703 27 + 4899514 GGTGGAGGAGTGGGGCGGCAGGCACGT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 37112 27 + 97742 GGTGGAGGAGTGGGGCGGGAGGCACGT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3685653 27 - 108555830 TGTGGAGGAGTGGGGCGGGAGGCATGG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 37018 27 + 85016 GGTGGAGGAGTGGGGCGGGAGGCACGT i manLeu1.NW_012101680v1 C 0 C 0 s aotNan1.NW_018507789v1 2489546 27 + 12154212 GGTGGAGGAGTGGGGCGGTAGGCACGG i aotNan1.NW_018507789v1 C 0 C 0 e panPan2.chr3 38511 1183 - 205426864 M a score=240170.000000 s hg38.chr3_KI270784v1_alt 150444 51 + 184404 CCTGGGGACCCTCAGT-TGGGCGCGCTGGCGATCCCGGGGCCGCCCAGGCCA s panTro5.chr3 43837 51 - 202621043 CCTGGGGACCCTCAGT-TGGGCGCGCTGGCGATCCCGGGGCCGCCCAGGCCA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 57308 51 + 508821 CCTGGGGACCCTCAGT-TGGGCGCGCTGGCGATCCTGGGGCCGCCCAGGCCA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 151387 51 - 123690457 CCTGGGGACCCTCAGT-CGGGCGCGCTGGCGATCCCGGGGCCGCCCAGGCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 21356 51 - 85730 CCTGGGGACCCTCAGTCTGGGCGCGCTGGCTAT-CCGGGGCCTCCTAGGCCA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 41564 51 - 181584905 CCTGGGGAACCTCAGTCTGGGCGCGCTGGCTAT-CTGGGGCCTCCTAGGCCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 37730 51 + 4899514 CCTGGGGACCCTCAGTCTGGGCGCGCTGGCTAT-CTGGGGCCTCCTAGGCCA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 37139 51 + 97742 CCTGGGGACCCTCAGTCTGGGCGCGCTGGCTAT-CCGGGGCCTCCTAGGCCA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3685680 50 - 108555830 CCGGGGG--CCTCAGGCTGGGCGCGCTGGCGATCCCGAGGCAGACCAGGTCA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 37045 51 + 85016 CCTGGGGACCCTCAGTCTGGGCGCGCTGGCTAT-CCGGGGCCTCCTAGGCCA i manLeu1.NW_012101680v1 C 0 M 1315 s colAng1.NW_012116822v1 1005106 51 - 1267912 CCTGGGGACCCTCAGTCTGGGCGCATTGGCGAT-CCGGGGCCTCCCAGGCCA i colAng1.NW_012116822v1 N 0 C 0 s aotNan1.NW_018507789v1 2489573 52 + 12154212 CCTGCGGGCCCTCAGGCTGGGCGCGCTGGCGATCCCGAGGCCGCCCAGGCAA i aotNan1.NW_018507789v1 C 0 C 0 e panPan2.chr3 38511 1183 - 205426864 M a score=632725.000000 s hg38.chr3_KI270784v1_alt 150495 144 + 184404 TGCCCCTCCAGCCCGCCTGGGCACCCAAGCTGCAGCCGCCTTCTGTGTGCAG---GCAGCAGCCTCCAGGCAACCCCCGAGCCCGCCCGCACTCCCAACATCTCAGAACCGGAGCCAGATGTACCAGTGGCTGCGGCCGAGCCAGGC s panTro5.chr3 43888 144 - 202621043 TGCCCCTCCAGCCCGCCTGGGCACCCAAGCTGCAGCCGCCTTCTGTGTGCGG---GCAGCAGCCTCCAGGCAACCCCGGAGCCCGCCCGCACTCCCAACATCTCAGAACCGGAGCCAGATGTACCAGTGGCTGCGGCCAAGCCAGGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 57359 144 + 508821 CGCCCCTCCAGCCCGCCTGGGCACCCAAGCTGCAGCCGCCTTCTGTGTGCAG---GCAGCAGCCTCCAGGCAACCCCCGAGCCCGCCCGCACTCCCAACATCTCAGAACCGGAGCCAGATGTACCAGTGGCTGCGGCCAAGCCAGGC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 151438 144 - 123690457 TGCCCCTCCAGCCCGCCTGGGCACCCAAGCTGCAGCCGCCTTCTGTGTGCAG---GCAGCAGCCTCCAGGCAACCCCCGAGCCCGCCCGCACTCCCCACATCTCAGAACCGGAGCCAGACGTACCAGCGGCTGCGGCCAAGCCAGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 21407 143 - 85730 TGCCCCTCCAGCCCGCCTGAGCACCCAAGCTGCAGCCGCCTTCTGTGTGCAG---GCAGCAGCCTCCAGGCAACCCCCGA-CATCTCAGCCCTCCCAACATCTCAGAACCGGGGCCAGATGTCCCAGCGGCTGCGGCCAAGCGAGGC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 41615 143 - 181584905 TGCCCCTCCAGCCCGCCTGAGCACCCAAGCTGCAGCCGCCTTCTGTGTGCAG---GCAGCAGCCTCCAGGCAACCCCCGA-CATCTCAGCCCTCCCAACATCTCAGAACCGGGGCCAGATGTCCCAGCGGCTGCGGCCAAGCGAGGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 37781 143 + 4899514 TGCCCCTCCAGCCCGCCTGAGCACCCAAGCTGCAGCCGCCTTCTGTGTGCAG---GCAGCAGCCTCCAGGCAACCCCCGA-CATCTCAGCCCTCCCAACATCTCAGAACCGGGGCCAGGTGTCCCAGCGGCTGCGGCCAAGCGAGGC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 37190 144 + 97742 TGCCCCTCCAGCCCGCCTGAGCACCCAAGCTGCAGCCGCCTTCTGTGTGCAG---ACAGCAGCCTCCAGGCAACCCCTGAGCCCGCCCGCACTCCCAACATCTCAGAACCGGGGCCAGATGTCCCAGCGGCTGCGGCCAAGCGAGGC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3685730 144 - 108555830 TGCACCTCCAGCCCGCCTGGGCACCCAAGCTACAGCCGGCTTCTGTGTGCAG---ACAGCAGCTTCCAGGCAATCCCCGACCCCGCCCGCACTCCCCATATCTCAGAACCGGGGCCAGATGTCCCTGTGGCTGCGGCCAAGCCAGGC i chlSab2.chr12 C 0 C 0 s colAng1.NW_012116822v1 1005157 144 - 1267912 TGCTCCTCCAGCCTGCCTGAGCACCCAAGCTGCAGCCGCCTTCTGTGTGCAG---GCAGCAGCCTCCAGGCAACCCCCGAGCCCGCCCGCACTCCCAACATCTCAGAACCGGGGCCAGATGTCCCAGCCGCTGCGGCCAAGCCAGGC i colAng1.NW_012116822v1 C 0 M 4180 s aotNan1.NW_018507789v1 2489625 134 + 12154212 -----TGCCAG-------GGGCACCCAAGCTGCAGCCGCCCTCTGTGTGCAGGCAGCAGCAGCCTCCAGGCAACCCCAGAGCCCGACCGCAATCCCAGCATCTCAGAACCGG-GCCAGATGTCCCAGTGACTGCGGCCAAGCCAGGC i aotNan1.NW_018507789v1 C 0 C 0 e manLeu1.NW_012101680v1 37096 1315 + 85016 M e panPan2.chr3 38511 1183 - 205426864 M a score=898217.000000 s hg38.chr3_KI270784v1_alt 150639 256 + 184404 AGTCGGCCCTGGGGCGGCTGCACAGGGGCGGGAACCCGCCCTCAGCCCCATTCCCGGTGGCTGCAGAGGGCCCCT--------------GGCTAGCGGTCCGGAGCTCCGGCAGAGGAGGAGCCGAGCG-GGGGCAGGGCCTGGCAGGCTCTCAGGCCAGGTGCACTCGCGATCCAGAGGCCGCCCAGGCCATGCTCCGCCGCCTGAGGGCCCAAGCTCCAGGCGCCCTCTGCCTGCTCGCAGCAGCCGCCTGGCAGCTCCCAAGCTCGCT s panTro5.chr3 44032 256 - 202621043 AGTCGGCCCTGGGGCGGCTGCACAGGGGCGGGAACCCGCCCTCAGCCCCATTCCCGGTGGCTGCAGAGGGCCCCT--------------GGCTTGCGGTCCGGAGCTCCGGCAGAGGAGGAGCCGAGCG-GGGGCAGGGCCTGGCAGGCTCTCAGGCCAGGTGCACTCGCGATCCCGAGGCCGCCCAGGCCATGCTCCGCCGCCTGAGGGCCCAAGCTCCAGGCGCCCTCTGCCTGCTCGCAGCAGCCGCCTGGCAGCTCCCAAGCTCGCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 57503 256 + 508821 AGTCGGCCCTGGGGCGGCTGCACAGGGGCGGGAACCCGCCCTCAGCCCCATTCCCGGTGGCTGCAGAGGGCCCCT--------------GGCTAGCGGTCCGGAGCTCCGGCAGAGGAGGAGCCGAGCG-GGGGCAGGGCCTGGCAGGCTCTCAGGCCAGGTGCACTCGCGATCCAGAGGCCGCCCGGGCCATGCTCCGCCGCCTGAGGGCCCAAGCTCCAGGCGCCCTCTGCCTGCTCGCAGCAGCCGCCTGGCAGCTCCCAAGCTCGCT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 151582 256 - 123690457 AGTCGGCCCTGGGGCGGCTGCACAGGGGCGGGAACCCGCCCTCAGCCCCATTCCCGGTGGCTGCAGAGGGCCCCT--------------GGCTAGCGGTCCGGAGCCCCGGCAGAGGAGGAGCCGAGCG-GGGGCAGGGCCTGGCAGGCTCTCAGGCCAGGTGCACTCGCCATCCAGAGGCCGCCCAGGCCGTGCTCCGCCGCCTGGGCGCCCAAGCTCCAGGCGCCCTCTGCCTGCTCGCAGCAGCCGCCTGGCAACTCCCAAGCTCGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 21550 250 - 85730 GGTCTGCCCTGGGGAGGCTGCACAGAGGCGGGAACCCGTCCTCAGCCCCATTCCCGGTGGCTGCTGAGGGCCCCT--------------GGCTAGCGGTCCCGAGCTCCGGCAGAGGAGGAGCCGGGCG-GGGGCA-GGCCTGGCA-ACCCTCA-GACAGGCGCACTCGCGATCCAGA-GCCGCCCAGGCCATGCTCCGCCGCCCGGGCGCTC-AACTGCGGGCGCCCTCCGCCTGCTCGCAGCGGCCGCCTGG-CACTCCCAAGCTCGCT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 41758 255 - 181584905 GGTCTGCCCTGGGGAGGCTGCACAGAGGCGGGAACCCGTCCTCAGCCCCATTCCCGGTGGCTGCTGAGGGCCCCT--------------GGCTAGCGGTCCCGAGCTCCTGCAGAGGAGGAGCCGGGCG-GGGGCA-GGCCTGGCAGGCCCTCAGGACAGGCGCACTCGCGATCCAGAGGCCGCCCAGGCCATGCTCCGCCGCCCGGGCGCTCAAACTGCGGGCGCCCTCCGCCTGCTCGCAGCGGCCGCCTGGCCACTCCCAAGCTCGCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 37924 255 + 4899514 GGTCTGCCCTGGGGAGGCTGCACAGGGGCGGGAACCCGTCCTCAGCCCCATTCCCGGTGGCTGCTGAGGGCCCCT--------------GGCTAGCGGTCCCGAGCTCCGGCAGAGGAGGAGCCGGGCG-GGGGCA-GGCCTGGCAGGCCCTCAGGACAGGCGCACTCGCGATCCAGAGGCCGCCCAGGCCATGCTCCGCCGCCCGGGCGCTCAAACTGCGGGCGCCCTCCGCCTGCTCGCAGCGGCCGCCTGGCCACTCCCAAGCTCGCT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 37334 255 + 97742 GGTCTGCCCTGGGGAGGCTGCACAGAGGCGGGAACCCGCCCTCAGCCCCATTCCCGGTGGCTGCAGAGGGCCCCT--------------GGCTAGCGGTCCCGAGCTCCGGCAGAGGAGGAGCCGGGCG-GGGGCA-GGCCTGGCAGGCCCTCAGGACAGGCGCACTCGCGATCCAGAGGCCGCCCGGGCCATGCTCCGCCGCCCGGGCGCTCAAACTGCGGACGCCCTCTGCCTGCTCGCAGCGGCCGCCTGGCCACTCCCAAGCTCGCT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3685874 269 - 108555830 GGTCTGCCCTGCGGCGGCAGCACAGGGGTGGGAACCGGCCCTCAGCCCCATCCCAGGTGGCTGCAGAGGGCCCCTAGCTAGAGGTCCCGAGCTAGAGGTCCCGAGCTCCGGCAGAGCAGGAGCC-GGCG-GGGGCAGGGCCTGGCGGGCTCTCAGGCCAGGTGCACTCGCGATCCAGAGGCCGCCCAGGCCATGCTCCACCACCTGGGCGCCCAAGCTGCAGGCGCCCTCTACCTGCTGGCGACAGCTGCCTGGCAACTCCCAAGCTGGTT i chlSab2.chr12 C 0 C 0 s aotNan1.NW_018507789v1 2489759 254 + 12154212 GGTCTGCCCTGCAGCGGCTGCACAGGAGTGGGGTTCGTCCCTCAGCTCCATCTTCGGTGGCTGTAGAGGGCCCCT--------------GGCTAGCGGTCCCAAGCTTCGGC---GGAGGAGCCGGGCGTGGGGCAGGACCTGGAGGGCTCTCAGGCCAGGATAACACACGATCCAGAGGCCTCCCAGGCAATGCTCCGCTGCCTGGGCGCCCAAGCTGCAGTCGCCCTTTGCCTGCTCGCAGCAGTCGCCTGGCAATTCCCAAGCTCGCT i aotNan1.NW_018507789v1 C 0 C 0 e colAng1.NW_012116822v1 1005301 4180 - 1267912 M e manLeu1.NW_012101680v1 37096 1315 + 85016 M e panPan2.chr3 38511 1183 - 205426864 M a score=147003.000000 s hg38.chr3_KI270784v1_alt 150895 34 + 184404 GGAGCTCCCAGCCTCGCAGAACCGGAGCCAGATG s panTro5.chr3 44288 34 - 202621043 GGCGCTCCCAGCCTCGCAGAACCGGAGCCAGATG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 57759 34 + 508821 GGCGCTCCCAGCCTCGCAGAACCGGAGCCAGATG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 151838 34 - 123690457 GGCGCTCCCAGCCTCGCAGAACCGGGGCCAGATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 21800 32 - 85730 GGCGCTCCTGGCCTCGCAGA--CCAGGCCGGATG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 42013 34 - 181584905 GGCGCTCCTGGCCTCGCAGAACCAGGGCCGGATG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 38179 34 + 4899514 GGCGCTCCTGGCCTCGCAGAACCAGGGCCGGATG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 37589 34 + 97742 GGCGCTCCCGGCCTCGCAGAACCGGGGCCGGATG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3686143 34 - 108555830 GGCGCTCCCAGCCTCGCAGACCTGGGGCTAGATG i chlSab2.chr12 C 0 C 0 s calJac3.chr18 46455372 34 - 47448759 GGTGCTCCCAGCCTCGCAGAACCGGGGCCAGACG i calJac3.chr18 N 0 I 3 s aotNan1.NW_018507789v1 2490013 34 + 12154212 GGCGCTCCCAGCCTCACAGAACCGGGGCCAGATG i aotNan1.NW_018507789v1 C 0 I 3 e colAng1.NW_012116822v1 1005301 4180 - 1267912 M e manLeu1.NW_012101680v1 37096 1315 + 85016 M e panPan2.chr3 38511 1183 - 205426864 M a score=587152.000000 s hg38.chr3_KI270784v1_alt 150929 132 + 184404 CCG---CGGCTGCAGCCAAGCCAGGCGGTCTGCCCGGCGGCGGCTGCACCGGGGCGGGAACTGCCCCACAGCCCCATCCCTGGTGGCTGCGGAGGGCCCCTGCCAGCGGCCCCGATCTCTCTTCGGAGGAGGAGC s panTro5.chr3 44322 132 - 202621043 CCG---CGGCTGCGGCCAAGCCAGGCGGTCTGCCCGGCGGCGGCTGCACCGGGGCGGGAACTGGCCCACAGCCCCATCCCTGGTGGCTGCGGAGGGCTCCTACCAGCGGCCCCGATCTCTCTTCGGAGGAGGAGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 57793 132 + 508821 CCG---CGGCTGCGGCCAAGCCAGGCGGTCTGCCCGGCGGCGGCTGCACCGGGGCGGGAACTGGCCCACAGACCCATCCCTGGTGGCTGCGGAGGGCCCCTGCCAGCGGCCCCGATCTCTCTTCGGAGGAGGAGC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 151872 132 - 123690457 CCG---CGGCTCCGGCCAAGCCAGGCGGTCTGCCTGGCGGCGGCTGCACCGGGGCGGGAACTGGCCCACAGCCCCATCCCTGGTGGCTGCGGAGGGCCCCTGCCAGCAGCGCCGATCTCTATTCGGAGGAGGAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 21832 126 - 85730 TCG-CGCGGCTGCGGCCA--------GATCTGCCCGGAGGCGGCTGCACCGGGGCGGGAACTGACCCTCAGCCCCATCCCCGGTGGTTGCGGAGGGCCCCTGCCAGCGGCCCGGATCTCTCTTCAGAGGAGGAGC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 42047 127 - 181584905 TCGCCGCGGCTGCGGCCA--------GATCTGCCCGGCGGCGGCTGCACCGGGGCGGGAACTGACCCTCAGCCCCATCCCCGGTGGTTGCGGAGGGCCCCTGCCAGCGGCCCGGATCTCTCTTCAGAGGAGGAGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 38213 127 + 4899514 TCGCCGCGGCTGCGGCCA--------GATCTGCCCGGCGGCGGCTGCACCGGGGCGGGAACTGACCCTCAGCCCCATCCCCGGTGGTTGCGGAGGGCCCCTGCCAGCGGCCCGGATCTCTCTTCAGAGGAGGAGC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 37623 127 + 97742 TCGCCGCGGCTGCGGCCA--------GATCTGCCCGGCGGCGGCTGCACCGGGGCGGGAACTGGCCCTCAGCCCCATCCCCGGTGGTTGCGGAGGGCCCCTGCCAGCGGCCCGGATCTCTCTTCAGAGGAGGAGC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3686177 135 - 108555830 TCGCCTTGTCTGCTCCCAAGTCAGGCGGTTTGCCCGGCGGGCGCTGCACCAGGGCGGGAATCGAACCCCAGCCCCAACCCTGGTGGCTGCGGAGGGCTCCTGTCAGCGGCCCGGATCTCTCTTCGTTGGAGGAGC i chlSab2.chr12 C 0 C 0 s calJac3.chr18 46455409 131 - 47448759 ---CTGTGGCTGCGGCCAAACTAGGAGGTCTGCTTGGCGGTGGCTGCACCGGGGCGGAAACCGGCCCTAAGCCGCATCTCCGGT-ACTTGAGGGGGCCCCTGCCAGCAGCCCCCATTTATCTTCGGAGGAGGAGC i calJac3.chr18 I 3 C 0 s cebCap1.NW_016107581v1 4396991 131 + 4432243 ---CCGCGGCTGCAGCCGAGCCGGGCGGTCTGCCCAGTAGCTGCTGCACTGGGTTGGGAACTGGCCCTCAGCCCCATCCCCAGTGGCTTTGGGGGGCTTCCGCCAGC-GCCCCGATCTCTCTTCGGAGGAGGAGC i cebCap1.NW_016107581v1 N 0 I 125 s aotNan1.NW_018507789v1 2490050 131 + 12154212 ---CCGTGGCTGCAGCCGAGCCGGGCAGTCTGCCCAGTAGCTGCTACACTGTGTCGGGAACCGGCTCTCAGCCCCATCCCCAGTGGCTTCGGAGGGCTTCCGCCAGC-GCCCCGATCTCTCTTCGGAGGAGGAGC i aotNan1.NW_018507789v1 I 3 C 0 e colAng1.NW_012116822v1 1005301 4180 - 1267912 M e manLeu1.NW_012101680v1 37096 1315 + 85016 M e panPan2.chr3 38511 1183 - 205426864 M a score=496835.000000 s hg38.chr3_KI270784v1_alt 151061 138 + 184404 GGGGC-GGGGGTCACGGCCAGGCGGGCCCTCAGGCCGGGCGGGTTGCGCGCCTGCGACTACGGGACGTCCCGGGCGAGCCCAGGAGAACCCGCAAGCCAGCGGCGCCTGCGCCCGAGCCGCAGCCGCCCCCTGCC--------------GGCA s panTro5.chr3 44454 138 - 202621043 GGGGC-GGGGGTCACGGCCAGGCGGGCCCTCAGGCCGGGCGGGTTGCGCGCCTGCGACTACGGGACGTCCCCGGCGAGCCCAGGAGAACCCGCAAGCCAGCGGCGCCTGCGCCCGAGCCGCAGCCGCCCCCTGTC--------------GGCA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 57925 138 + 508821 GCGGC-GGGGGTCACGGCCAGGCGGGCCCTCAGGCCGGGCGGATTGCGCGCCTGCGACTACGGGACGTCCCGGGCGAGCCCAGGAGAATCCGCAAGCCAGCGGCGCCTGCGCCCGAGCCGCAGCCGCCCCCTGTC--------------GGCA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 152004 138 - 123690457 GGGGCAGGGGGTCACGGCCAGGCGGGCCCTCAGGCCGGGCGGGTTGCGCGCCTGCGACTACGGGACGTCCCGGGCGAGCCCAGGAGAACCCGCCAGCCAG-GGCGCCTGCGCACGAGCTGAAGCCGCCCCCTGCC--------------GGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 21958 151 - 85730 GGGGC-GGGGGTCACGGCCAGGCGGGCCCTCAAGCCGCGCGGGCGGCGCGCATGTGTTTCCGGGACGCCCC-GGCGAGCCCAGGAGAACCCGCAAGCCCGCGGCGCGTGCGCCCGACCTGCAGCCGCCCCCTGCCGGCCTCCCCCTGCGGGCC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 42174 152 - 181584905 GGGGC-GGGGGTCACGGCCAGGCGGGCCCTCAAGCCGCGCGGGCGGCGCGCCTGTGTTTCCGGAACGTCCCGGGCGAGCCCAGGAGAACCCGCAAGCCCGCGGCGCCTGCGCCCGACCTGCAGCCGCCCCCTGCCGGCCTCCCCCTGCGGGCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 38340 152 + 4899514 GGGGC-GGGGGTCACGGCCAGGCGGGCCCTCAAGCCGCGCGGGCGGCGCGCATGTGTTTCCGGGACGTCCCGGGCGAGCCCAGGAGAACCCGCAAGCCCGCGGCGCCTGCGCCCGACCTGCAGCCGCCCCCTGCCGGCCTCCCCCTGCGGGCC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 37750 152 + 97742 GGGGC-GGGGGTCACGGCCAGGCGGGCACTCAAGCTGCGCGGGCGGCGCGCGTGTGATTCCGGGACGTCCCGGGCGAGCCCAGGAGAACCCGCAAGCCCGCGGCACCTGCGCCCGACCTGCAGCCGCCCCCTGCCGGCCTCCCCCTGCGGGCC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3686312 138 - 108555830 GAGGC-AGGAGTCACCGCCATGCGGACCCTCAGGCCAGACGGGCTTCGCGCCTGCGATTCCGGGACGTCCCGCGCGAGCCTAGGAGAACCCGCAAACCAGCGGCGCCTGCGCTCGAGCTGCAGCCGCCCCCTTCC--------------GGTC i chlSab2.chr12 C 0 C 0 s calJac3.chr18 46455540 132 - 47448759 GGAGC-GGGGGTCACGGCCAGGCGGGCCCTCGTGCCAGCAG------GCATCTGCGATTCCGGGAAGGCCCCGGCGAGCCCAGGAGAACCCCGAAGCCGACGGCACCTGCGCCAGAGCTGCAGCCAACCCCTGCCTGGC-------------- i calJac3.chr18 C 0 C 0 s aotNan1.NW_018507789v1 2490181 125 + 12154212 GGGGC--GGAACCGGAGCCAGGCCGGCCCTCAGGCCTGGAGCGCTGCGCGTCCGCGATTTCCGGAAGTCCCAGGCGAGCCCAGGAGAACCCGCAAGTCAGCTGCTCCTGCGCC----------CCGCCCCCTGTCCG---------------- i aotNan1.NW_018507789v1 C 0 C 0 e cebCap1.NW_016107581v1 4397122 125 + 4432243 I e colAng1.NW_012116822v1 1005301 4180 - 1267912 M e manLeu1.NW_012101680v1 37096 1315 + 85016 M e panPan2.chr3 38511 1183 - 205426864 M a score=95046.000000 s hg38.chr3_KI270784v1_alt 151199 17 + 184404 GCGCGGGCTTGGGAGCG s panTro5.chr3 44592 17 - 202621043 GCGCGGGCTTGGGAGCG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 58063 17 + 508821 GCGCGGGCTTGGGAGCG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 152142 17 - 123690457 GCGCGGGCTTGGGAGCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 22109 17 - 85730 GCGCAGGCTTGGGAGCT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 42326 17 - 181584905 GCGCAGGCTTGGGAGCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 38492 17 + 4899514 GCGCAGGCTTGGGAGCT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 37902 17 + 97742 GCGCAGGCTTGGGAGCT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3686450 17 - 108555830 ACGCGGGCTTGAGAGCG i chlSab2.chr12 C 0 C 0 s calJac3.chr18 46455672 17 - 47448759 GCGCGGGCCTGGGAGCG i calJac3.chr18 C 0 C 0 s cebCap1.NW_016107581v1 4397247 17 + 4432243 GCGCGGGCTTGGGAGCG i cebCap1.NW_016107581v1 I 125 C 0 s aotNan1.NW_018507789v1 2490306 17 + 12154212 GCGCGGGCTTGGGAGCG i aotNan1.NW_018507789v1 C 0 C 0 e colAng1.NW_012116822v1 1005301 4180 - 1267912 M e manLeu1.NW_012101680v1 37096 1315 + 85016 M e panPan2.chr3 38511 1183 - 205426864 M a score=93623.000000 s hg38.chr3_KI270784v1_alt 151216 17 + 184404 GCTTCCGGAGTCCGCGC s panTro5.chr3 44609 17 - 202621043 GCTTCCGGAGTCCGCGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 58080 17 + 508821 GCTTCCGGAGTCCGCGC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 152159 17 - 123690457 GCTTCCGGAGTCCGAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 22126 17 - 85730 GCTTCCGGCGTCCGCGC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 42343 17 - 181584905 GCTTCCGGCGTCCGCGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 38509 17 + 4899514 GCTTCCGGCGTCCGCGC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 37919 17 + 97742 GCTTCCGGCGTTCGCGC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3686467 17 - 108555830 GCTTCCGGAGTCCCGGC i chlSab2.chr12 C 0 C 0 s calJac3.chr18 46455689 17 - 47448759 GCTTCCGGAGTCCCCGC i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 0 12 + 8899380 GCTTCCGGCGTC----- i saiBol1.JH378197 N 0 C 0 s cebCap1.NW_016107581v1 4397264 17 + 4432243 GCTTCCGGGGTTCGCGC i cebCap1.NW_016107581v1 C 0 I 46 s aotNan1.NW_018507789v1 2490323 17 + 12154212 GCTTCCAGAGTTCGCGC i aotNan1.NW_018507789v1 C 0 C 0 e colAng1.NW_012116822v1 1005301 4180 - 1267912 M e manLeu1.NW_012101680v1 37096 1315 + 85016 M e panPan2.chr3 38511 1183 - 205426864 M a score=5422.000000 s hg38.chr3_KI270784v1_alt 151233 2 + 184404 GG s panTro5.chr3 44626 2 - 202621043 GG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 58097 2 + 508821 GG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 152176 2 - 123690457 GG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 22143 2 - 85730 GG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 42360 2 - 181584905 GG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 38526 2 + 4899514 GG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 37936 2 + 97742 GG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3686484 2 - 108555830 TG i chlSab2.chr12 C 0 I 422 s calJac3.chr18 46455706 2 - 47448759 AG i calJac3.chr18 C 0 C 0 s aotNan1.NW_018507789v1 2490340 2 + 12154212 GC i aotNan1.NW_018507789v1 C 0 C 0 e cebCap1.NW_016107581v1 4397281 46 + 4432243 I e saiBol1.JH378197 12 0 + 8899380 C e colAng1.NW_012116822v1 1005301 4180 - 1267912 M e manLeu1.NW_012101680v1 37096 1315 + 85016 M e panPan2.chr3 38511 1183 - 205426864 M a score=173695.000000 s hg38.chr3_KI270784v1_alt 151235 38 + 184404 GCGC-TGAGCTGCAGGCGCGCGCCTAACGGCTTCGCGGG s panTro5.chr3 44628 38 - 202621043 GCGC-TGAGCTGCAGGCGCGCGCCTAACGGCTTCGCGGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 58099 38 + 508821 GCGC-TGAGCTGCAGGCGCGCGCCTAACGGCTTCGCGGG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 152178 38 - 123690457 GCGC-TGAGCTGGGGGCGCGCGCCTAACGGCTTTGCGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 22145 38 - 85730 GCGC-TGAGCTGCAGGTGCGCGCCTAACGGCGTCGCGGG i rheMac8.chrUn_NW_014858614v1 C 0 I 34 s macFas5.chr6 42362 38 - 181584905 GCGC-TGAGCTGCAGGCGCGCGCCTAACGGCGTCGCGGG i macFas5.chr6 C 0 I 11 s macNem1.NW_012020287v1 38528 38 + 4899514 GCGC-TGAGCTGCAGGTGCGCGCCTAACGGCGTCGCGGG i macNem1.NW_012020287v1 C 0 I 34 s cerAty1.NW_012005170v1 37938 38 + 97742 GCGC-TGAGCTGCAGGCGCGCGCCTAACGGCGTTGCGGG i cerAty1.NW_012005170v1 C 0 I 34 s chlSab2.chr12 3686908 38 - 108555830 GCGC-TGAGCTGCAGGCACGCGCCTAACGGCTTGACGGG i chlSab2.chr12 I 422 I 11 s calJac3.chr18 46455708 38 - 47448759 GCGT-TGAGCTGCAGGCGCGTGTCCAACAGCTTCACCCG i calJac3.chr18 C 0 I 11 s saiBol1.JH378197 12 27 + 8899380 ------------CGGGCGCGCGCCCAACGGCTTCACTGG i saiBol1.JH378197 C 0 I 11 s aotNan1.NW_018507789v1 2490342 39 + 12154212 GCGTCTGACCCGCAGGCGCGCGCCTAACGGTTTTACTGG i aotNan1.NW_018507789v1 C 0 I 11 e cebCap1.NW_016107581v1 4397281 46 + 4432243 I e colAng1.NW_012116822v1 1005301 4180 - 1267912 M e manLeu1.NW_012101680v1 37096 1315 + 85016 M e panPan2.chr3 38511 1183 - 205426864 M a score=58705.000000 s hg38.chr3_KI270784v1_alt 151273 17 + 184404 CTGAGAGGTCAGAGGCT s panTro5.chr3 44666 17 - 202621043 CTGAGAGGTCAGAGGCT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 58137 17 + 508821 CTGAGAGGTCAGAGGCC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 152216 17 - 123690457 CTGAGAGGTCGGAGGCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 42411 17 - 181584905 CTGAGAGGTCGGAGGCT i macFas5.chr6 I 11 C 0 s chlSab2.chr12 3686957 17 - 108555830 CTGAGAGGTCGGAGGCT i chlSab2.chr12 I 11 C 0 s calJac3.chr18 46455757 17 - 47448759 CTGAGAGGTCAGAGGTT i calJac3.chr18 I 11 C 0 s saiBol1.JH378197 50 15 + 8899380 CT--GAGGTCGGAGTTT i saiBol1.JH378197 I 11 C 0 s cebCap1.NW_016107581v1 4397327 17 + 4432243 CTGAGAGGTCGGAGGCT i cebCap1.NW_016107581v1 I 46 C 0 s aotNan1.NW_018507789v1 2490392 17 + 12154212 CTGAGAGGTTGGAGGCT i aotNan1.NW_018507789v1 I 11 C 0 e cerAty1.NW_012005170v1 37976 34 + 97742 I e colAng1.NW_012116822v1 1005301 4180 - 1267912 M e rheMac8.chrUn_NW_014858614v1 22183 34 - 85730 I e manLeu1.NW_012101680v1 37096 1315 + 85016 M e macNem1.NW_012020287v1 38566 34 + 4899514 I e panPan2.chr3 38511 1183 - 205426864 M a score=165928.000000 s hg38.chr3_KI270784v1_alt 151290 58 + 184404 GCGAGTGTCGCTGCTGAAGGCTGTGGTGGACCCGGCCGGGTCGCGGATTCTGAGCTAC s panTro5.chr3 44683 58 - 202621043 GCGAGTGTCGCTGCTGAAGGCTGTGGTGGACCCGGCTGGGTCGCGGATTCTGAGCTAC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 58154 58 + 508821 GCGAGTGTCGCTGCTGAAGGCTGTGGTGGACCCGGCTGGGTCGCGGATTCTGAGCTAC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 152233 58 - 123690457 GCGAGTGTCGCTGCTGAAGGCTGTGGTGGACCCGGCTGGGTCGCGGATTCTGAGCTAC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr12 3686974 58 - 108555830 GCGAGTGTCGCTGCTGAAGGCTGTGGTGGACCGGGCTGGATCGCGGATTCTGAGCTAC i chlSab2.chr12 C 0 C 0 s calJac3.chr18 46455774 58 - 47448759 GCGGGTGCCGCTGCCGAAGGCTGTGGTGGACCTGGCTGAATCGTGGATTCAGAGCTAC i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 65 52 + 8899380 GCGAGTCTCGCTGCTGCAGACTGCGGTAGACCGGGCTGGAGCGCGGATTCTG------ i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4397344 58 + 4432243 GCGAGTGTCTCTGCTGAAGGCTGTGGTGGACCGGGCTGGATCGCGGATTCTGAGCCAC i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2490409 58 + 12154212 GCGAGTGTCGCTGCTGAAGGCTGTGGTGAACCGGGCTGGATCGCGGATTCTGAGCTAC i aotNan1.NW_018507789v1 C 0 C 0 e cerAty1.NW_012005170v1 37976 34 + 97742 I e colAng1.NW_012116822v1 1005301 4180 - 1267912 M e rheMac8.chrUn_NW_014858614v1 22183 34 - 85730 I e manLeu1.NW_012101680v1 37096 1315 + 85016 M e macNem1.NW_012020287v1 38566 34 + 4899514 I e macFas5.chr6 42428 0 - 181584905 C e panPan2.chr3 38511 1183 - 205426864 M a score=9464.000000 s hg38.chr3_KI270784v1_alt 151348 15 + 184404 ATCTCGGGTTT---------------------GG---------------GG- s panTro5.chr3 44741 15 - 202621043 ATCTCGGGTTT---------------------GG---------------GG- i panTro5.chr3 C 0 C 0 s panPan2.chr3 39694 15 - 205426864 ATCTCGGGTTT---------------------GG---------------GG- i panPan2.chr3 M 1183 C 0 s gorGor5.CYUI01015884v1 58212 15 + 508821 ATCTCGGGTTT---------------------GG---------------GG- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 152291 15 - 123690457 ATCTCGGGTTT---------------------GG---------------GG- i nomLeu3.chr11 C 0 I 13 s chlSab2.chr12 3687032 15 - 108555830 ATCGCGGGTTT---------------------GG---------------GG- i chlSab2.chr12 C 0 I 67 s calJac3.chr18 46455832 51 - 47448759 ATTGCGGGTTT-GGGGTGGATCGCGGGTTGGGGCTGGATCGCGGATTTGGGG i calJac3.chr18 C 0 I 13 s saiBol1.JH378197 117 51 + 8899380 ATCGCGGGTTTGGGGGTCGATTGCGGTTTGGGGC-GGATCCCTGGTGTGGGG i saiBol1.JH378197 C 0 I 12 s cebCap1.NW_016107581v1 4397402 16 + 4432243 ATCGGGGGATT---------------------GC---------------GGG i cebCap1.NW_016107581v1 C 0 I 12 s aotNan1.NW_018507789v1 2490467 16 + 12154212 ATTGGGGGTTT---------------------GG---------------GGG i aotNan1.NW_018507789v1 C 0 I 12 e cerAty1.NW_012005170v1 37976 34 + 97742 I e colAng1.NW_012116822v1 1005301 4180 - 1267912 M e rheMac8.chrUn_NW_014858614v1 22183 34 - 85730 I e manLeu1.NW_012101680v1 37096 1315 + 85016 M e macNem1.NW_012020287v1 38566 34 + 4899514 I e macFas5.chr6 42428 0 - 181584905 C a score=7974.000000 s hg38.chr3_KI270784v1_alt 151363 9 + 184404 TTAGGGTT-------A------- s panTro5.chr3 44756 9 - 202621043 TTAGGGTT-------A------- i panTro5.chr3 C 0 C 0 s panPan2.chr3 39709 9 - 205426864 TTAGGGTT-------A------- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 58227 9 + 508821 TTAGGGTT-------A------- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 152319 16 - 123690457 TTGGGGCTGGGTGAGG------- i nomLeu3.chr11 I 13 C 0 s calJac3.chr18 46455896 16 - 47448759 TTGGGGCT-------GGGTGGGA i calJac3.chr18 I 13 C 0 s saiBol1.JH378197 180 16 + 8899380 TTGGGTCT-------GGGTGAGG i saiBol1.JH378197 I 12 C 0 s cebCap1.NW_016107581v1 4397430 16 + 4432243 TTGGGGCT-------GGGTGGGG i cebCap1.NW_016107581v1 I 12 C 0 s aotNan1.NW_018507789v1 2490495 16 + 12154212 TTGGGGCT-------GGGTGGGG i aotNan1.NW_018507789v1 I 12 C 0 e cerAty1.NW_012005170v1 37976 34 + 97742 I e colAng1.NW_012116822v1 1005301 4180 - 1267912 M e rheMac8.chrUn_NW_014858614v1 22183 34 - 85730 I e manLeu1.NW_012101680v1 37096 1315 + 85016 M e chlSab2.chr12 3687047 67 - 108555830 I e macNem1.NW_012020287v1 38566 34 + 4899514 I e macFas5.chr6 42428 0 - 181584905 C a score=151919.000000 s hg38.chr3_KI270784v1_alt 151372 46 + 184404 GTGGAAAGGCCACGAGGAGCCGCGGGGGCTCAGGAGCCGGTGGTGG s panTro5.chr3 44765 46 - 202621043 GTGGAAAGGCCACGAGGAGCCGCGGGGGCTCAGGAGCCGGTGGTGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 39718 46 - 205426864 GTGGAAAGGCCACGAGGAGCCGCGGGGGCTCAGGAGCCGGTGGTGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 58236 44 + 508821 GTGGAAAGG-CACGAGGAGCCGC-GGGGCTCAGGAGCCGGTGGTGA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 152335 46 - 123690457 GTGGAAAGGCCACGAGGAGCCGCGGGGGCTCAGGAGCCGGTGGTGG i nomLeu3.chr11 C 0 C 0 s chlSab2.chr12 3687114 46 - 108555830 GTGGAAAGGCCACGAGGGGCCGCGGCGGCTCAGGAGCGGGTTGTGG i chlSab2.chr12 I 67 C 0 s calJac3.chr18 46455912 46 - 47448759 GTGGAAAGGCCACGAGGAGCCGCGGCGGCTCAGGAGCGGGTGGTTG i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 196 45 + 8899380 GTGGAAAGGCCACGAGGAGCC-CGGCGGCTCAGGAGCCGGTGGTGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4397446 46 + 4432243 GTGAAAAGGCCACGAGGAGAACAGGCAGCTCAGGAGCGGGTGGTGG i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2490511 46 + 12154212 GTGAAAAGGCCACGAGGAGAACAGGCAGCTCAGGAGCGGGCGGTGG i aotNan1.NW_018507789v1 C 0 C 0 e cerAty1.NW_012005170v1 37976 34 + 97742 I e colAng1.NW_012116822v1 1005301 4180 - 1267912 M e rheMac8.chrUn_NW_014858614v1 22183 34 - 85730 I e manLeu1.NW_012101680v1 37096 1315 + 85016 M e macNem1.NW_012020287v1 38566 34 + 4899514 I e macFas5.chr6 42428 0 - 181584905 C a score=32815.000000 s hg38.chr3_KI270784v1_alt 151418 9 + 184404 GCGTCTG---AG s panTro5.chr3 44811 9 - 202621043 GCGTCTG---AG i panTro5.chr3 C 0 C 0 s panPan2.chr3 39764 9 - 205426864 GCGTCTG---AG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 58280 9 + 508821 GCGTCTG---AG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 152381 9 - 123690457 GCGTCTG---AG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 42428 9 - 181584905 GCGTCTG---AG i macFas5.chr6 C 0 C 0 s chlSab2.chr12 3687160 9 - 108555830 GCGTCTG---AG i chlSab2.chr12 C 0 C 0 s calJac3.chr18 46455958 12 - 47448759 GCGGCTGAGAAG i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 241 9 + 8899380 GCTTCTG---AG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4397492 7 + 4432243 GCGTCTG----- i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2490557 9 + 12154212 GCGTCTG---AG i aotNan1.NW_018507789v1 C 0 C 0 e cerAty1.NW_012005170v1 37976 34 + 97742 I e colAng1.NW_012116822v1 1005301 4180 - 1267912 M e rheMac8.chrUn_NW_014858614v1 22183 34 - 85730 I e manLeu1.NW_012101680v1 37096 1315 + 85016 M e macNem1.NW_012020287v1 38566 34 + 4899514 I a score=349455.000000 s hg38.chr3_KI270784v1_alt 151427 47 + 184404 GAGAAGTCGCC-CCATGAGGAAGCTC-TTCAGCTTCGGGAGACGCCCGG s panTro5.chr3 44820 47 - 202621043 GAGAAGTCGCC-CCATGAGGAAGCTC-TTCAGCTTCGGGAGACGCCTGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 39773 47 - 205426864 GAGAAGTCGCC-CCACGAGGAAGCTC-TTCAGCTTCGGGAGACGCCTGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 58289 47 + 508821 GAGAAGTCGCC-CCATGAGGAAGCTC-TTCAGCTTCGGGAGACGCCTGG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 152390 47 - 123690457 GAGAAGTCGCC-CCATGAAGAAGCTC-TTCAGCTTCGGGAGACGCGTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 22217 47 - 85730 GAGAAGTCGCC-CCATGAGGAAGCTC-TTCAGCTTCGGGAGACGCCTGG i rheMac8.chrUn_NW_014858614v1 I 34 C 0 s macFas5.chr6 42437 44 - 181584905 ---AAGTCGCC-CCATGAGGAAGCTC-TTCAGCTTCGGGAGACGCCTGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 38600 47 + 4899514 GAGAAGTCGCC-CCATGAGGAAGCTC-TTCAGCTTCGGGAGACGCCTGG i macNem1.NW_012020287v1 I 34 C 0 s cerAty1.NW_012005170v1 38010 47 + 97742 GAGAAGTCGCC-CCATGAGGAAGCTC-TTCAGCTTCGGGAGACGCCTGG i cerAty1.NW_012005170v1 I 34 C 0 s chlSab2.chr12 3687169 45 - 108555830 ---AAGTCGCCACCATGAGGAGGCTC-TTCAGCTTCGGGAGACGCCTGG i chlSab2.chr12 C 0 C 0 s calJac3.chr18 46455970 48 - 47448759 AAGAAGTCGCCAACATGAGGAAGCTC-TTCAGCTTTGGGAGACGCCTGG i calJac3.chr18 C 0 I 209 s saiBol1.JH378197 250 48 + 8899380 GAGAAGTCGCCACCATGAGGAAGCTC-TTCAGCTTCGGGGGACGCCTGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4397499 47 + 4432243 -AGAAGTGGCCACTATGAGGAGGCTC-TTCCGCTTCGGGAGACGCCTGG i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2490566 49 + 12154212 GAGAAGTGGCCACCATGAGGAAGCTCTTTCAGCTTCGGGAGACGCCTGG i aotNan1.NW_018507789v1 C 0 C 0 e colAng1.NW_012116822v1 1005301 4180 - 1267912 M e manLeu1.NW_012101680v1 37096 1315 + 85016 M a score=1312176.000000 s hg38.chr3_KI270784v1_alt 151474 206 + 184404 GCCGGGCGGTCCTGGGCTCCATCGA---CCACGAGTACCCGGGTCCCGCGTACCACACCAGGGACGCGGAACTGCGGAAGATCCACAGGGCGGCCCTCAAGGGCGACGCCGCGGAGGTGGAGCGCCGCCTGGCGCGCAGGTGCCGGGACGTGGATGCCC---------AGGACAGGTAGCG-------------GGGGCTCAG-CCGGGGTGGGAGGGGG-TCCCCAGGCCCG s panTro5.chr3 44867 206 - 202621043 GCCGGGCGGTCCTGGGCTCCATCGG---CCACGAGTACGCGGGTCCCGGGTACCACACCAGCGACGCGGAACTGCGGAAGATCCACAGGGCGGCCCTCAAGCGCGACGCCGCGGAGGTGGAGCGCCGCCTGGCGCGCAGGTGCCGGGACGTGGAAGCCC---------AGGACAGGTAGCG-------------GGGGCTCCG-CCGGGGTGGGAGGGGG-TCCCCAGGCCCG i panTro5.chr3 C 0 C 0 s panPan2.chr3 39820 206 - 205426864 GCCGGGCGGTCCTGGGCTCCATCGG---CCACGAGTACGCGGGTCCCGGGTACCACACCAGCGACGCGGAACTGCGGAAGATCCACAGGGCGGCCCTCAAGGGCGACGCCGCGGAGGTGGAGCGCCGCCTGGCGCGCAGGTGCCGGGACGTGGAAGCCC---------AGGACAGGTAGCG-------------GGGGCTCCG-CCGGGGTGGGAGGGGG-TCCCCAGGCCCG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 58336 206 + 508821 GCCAGGCGGTCCTGGGCTCCATCGA---CCACGAGCACCCGGGTCCCGGGTACCACACCAGGGACGCGGAACTGCGGAAGATCCACAGGGCGGCCCTCAAGGGCGACGCCGCGGAGGTGGAGCGCCGCCTGGCGCGCAGGCGCCGGGACGTGGATGCCC---------AGGACAGGTAGCG-------------GGGGCCCAG-CCGGGGTGGGAGGGGG-TCCCCGGGCCCG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 152437 205 - 123690457 GCCGGGCGGTCCTGGGCTCCATCGA---CCACGAGTACGC-GGTGCCGGGTACCACACCAGGGACGCGGAACTGCGGAAGATCCGCAGGGCGGCCCTCAAGGGCGACGCCGCAGAGGTGGAGCGCCGCCTGGCGCGCAGGAGCCGGGACGTGGATGCCC---------AGGACAGGTAGCG-------------GGGGCTCAG-CCGCGGTGGGACGGGG-TCCCCAGGCCCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 22264 214 - 85730 GCCAGGCGGTCCTGGGCTCCGTCCA---CCAAGAGTACGCGGGCCCCGGGTCCCACACCAGGGACGCGGAACTGCGGAAGACCCACAGGGCGGCCATCAAGGGCGAGGCCGCGGAGGTGCA--GCTGCCTGGCGCGCAGGAGCCGGGACGTGGATGCCCGCGACAGGAAGGACAGGTGGCG-------------GGGGCTCAGCCCGGGGTGGGAGGGGG-TCCCCAGGCCCG i rheMac8.chrUn_NW_014858614v1 C 0 I 24 s macFas5.chr6 42481 214 - 181584905 GCCAGGCGGTCCTGGGCTCCGTCCA---CCAAGAGTACGCGGGCCCCGGGTCCCACACCAGGGACGCGGAACTGCGGAAGACCCACAGGGCGGCCATCAAGGGCGAGGCCGCGGAGGTGCA--GCTGCCTGGCGCGCAGGAGCCGGGACGTGGATGCCCGCGACAGGAAGGACAGGTGGCG-------------GGGGCTCAGCCCGGGGTGGGAGGGGG-TCCCCAGGCCCG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 38647 214 + 4899514 GCCAGGCGGTCCTGGGCTCCGTCCA---CCAAGAGTACGCGGGTCCCGGGTCCCACACCAGGGACGCGGAACTGCGGAAGACCCACAGGGCGGCCATCAAGGGCGAGGCCGCGGAGGTGCA--GCTGCCTGGCGCGCAGGAGCCGGGACGTGGATGCCCGCGACAGGAAGGACAGGTGGCG-------------GGGGCTCAGCCCGGGGTGGGAGGGGG-TCCCCAGGCCCG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 38057 214 + 97742 GCCAGGCGGTCCTGGGCTCCGTCCA---CCACGAGTACGCGGGTCCCGGGTCCCACACCAGGGACGCGGAACTGCGGAAGACCCACAGGGCGGCCATCAAGGGCGACGCCGCGGAGGTGCA--GCTGCCTGGCGCGCAGGAGCCGGGACGTGGATGCCCGCGACAGGAAGGACAGGTGGCG-------------GGGGCTCAGCCCGGGGTGGGAGGGGG-TCCCCAGGCCCG i cerAty1.NW_012005170v1 C 0 I 19 s chlSab2.chr12 3687214 212 - 108555830 GCCAGATGCTCCTGAGCTCCAGGGA---CGAAGAGTACGCGGGTCGCGGGTACCACACCCTGGACTGGGAACTGCGGAAGATCCACAGGGCGGCCATCAAGGGCGACGCCGCGGAGGTGGAGCGCTGCCTGAGGC---GGTTTCGGGACGTGGACGCCCGCGACAGAAAGGACAGGTAGCG-------------GGGGCTCAGCCCGCGGTGGGAGGGGG--CCCCAGGCCCG i chlSab2.chr12 C 0 C 0 s calJac3.chr18 46456227 219 - 47448759 GCCAGACGGTCCTGGGCTCCATCGAGCGCGACGAGTACGCGGGTCCCGGGTACCACATCCGGGACGCGGAACTGCGGAAGATCCACAGGGCTGCCATCAAGGGCAACGCCGCAGAGGTGGAGCGCTGCCTGAGGTGCAGGAGCCAGGACGTGGACGCCCGCGACAAGAAGGGCAGGTAGCG-------------CAGGCTCAGCCAGGGGTGGGAGGGGG-TCCCCAGGCCCG i calJac3.chr18 I 209 C 0 s saiBol1.JH378197 298 230 + 8899380 GCCAGGCGTTCCGGGGCTCCACCGA---CGACGAGTACTCCGGTCCCGGGTACCACGTCCGGGACTGGGAGCTGCGGAAGATGCACAGGGCGGCCTTCCGGGGCGATGCTGCGGCGGTGGAGCGCTGCCTGAGGGGCAGGAGCCGGGATGTGGACGCCCGCGACAGGAAGGACAGGTAGCGGGGGCTTGTAGCTGGGGCTCAGCCCGGGGTCAGAGGGGGATCCCCGGGCCCG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4397546 216 + 4432243 GCCTGGCAGTC--GGGCTACCTCGACTACGAGGAGCAGGCGGGTCGCGGTTTCCACAGACTGGACGCGGAACTGAGGAAGACCCGCGGGGCGGCCCTAAAGGGCGGTGCCGCGGAGTTGGAGCGCTGCCTGACGCGCGGGAGCC-GGACGTGGACGCCGGCGACAGAAGGGACAGGTAGCG--------------GGGCCCAGCCTGGGGTCGGAGGGGAGTCCTCAGGCCTG i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2490615 215 + 12154212 GCCTGGCGGTCAGGGGCTACCTCGA---CGAGGAGTAGGCGGGTCGCGGGTTCCGCAGACGGGACGCGGAAGTGAGGAAGATCCACAGGGCGGCCCTAAAGGGCGATGCCGCGGAGGTGGAACGCTGCCTGACGCGCGGGAGCC-GGACGTGGACGCCGGCGACAGGAAGAACAGGTAGCG--------------GGACCCAGCCTGGGGTCGGAGGGGGGTCCTCGGGCCGG i aotNan1.NW_018507789v1 C 0 C 0 e colAng1.NW_012116822v1 1005301 4180 - 1267912 M e manLeu1.NW_012101680v1 37096 1315 + 85016 M a score=-6632.000000 s hg38.chr3_KI270784v1_alt 151680 8 + 184404 GCTT---------------------CCCC s panTro5.chr3 45073 8 - 202621043 GCTT---------------------CCCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 40026 8 - 205426864 GCTT---------------------CCCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 58542 16 + 508821 GCTT-------------ccccgcagcccc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 152642 24 - 123690457 GCTT-----ccccgcagccccgcagcccc i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 42695 4 - 181584905 GCTT------------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 38861 4 + 4899514 GCTT------------------------- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 38290 5 + 97742 GCCCG------------------------ i cerAty1.NW_012005170v1 I 19 C 0 s chlSab2.chr12 3687426 8 - 108555830 GCTT-CCCT-------------------- i chlSab2.chr12 C 0 C 0 s calJac3.chr18 46456446 8 - 47448759 GCTT---------------------CCCT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 528 8 + 8899380 GCTT---------------------CCCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4397762 8 + 4432243 TCTT---------------------CCCC i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2490830 8 + 12154212 GCTT---------------------CCCC i aotNan1.NW_018507789v1 C 0 C 0 e colAng1.NW_012116822v1 1005301 4180 - 1267912 M e rheMac8.chrUn_NW_014858614v1 22478 24 - 85730 I e manLeu1.NW_012101680v1 37096 1315 + 85016 M a score=139064.000000 s hg38.chr3_KI270784v1_alt 151688 30 + 184404 GCAGCCCCGCAGCCC--------CTGGGACGGGGGCCT s panTro5.chr3 45081 30 - 202621043 GCAGCCCCGCAGCCC--------CTGGGACGGGGGCCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 40034 30 - 205426864 GCAGCCCCGCAGCCC--------CTGGGACGGGGGCCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 58558 30 + 508821 gcagccccgcagccc--------cTGGGACGGGGGCCT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 152666 30 - 123690457 gcagccccgcagccc--------cTGGGACGGGAGCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 22502 30 - 85730 GCTTCCCCGCAGGTC--------CTGGGACGGGGGCCT i rheMac8.chrUn_NW_014858614v1 I 24 C 0 s macFas5.chr6 42699 26 - 181584905 ----CCCCGCAGGTC--------CTGGGACGGGGGCCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 38865 26 + 4899514 ----CCCCGCAGGTC--------CTGGGACGGGGGCCT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 38295 30 + 97742 GCTTCCCCGCAGGTC--------CTGGGACGGGGGCCT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3687434 13 - 108555830 --------GCAGCCC-----------------AGACCT i chlSab2.chr12 C 0 C 0 s calJac3.chr18 46456454 38 - 47448759 GTAGCCCTGCAGCCCCACAGCCGCTGGGGCGGGAGCCT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 536 21 + 8899380 GCAGCCC----------------CTGGGACCGG-GTCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4397770 30 + 4432243 GCAGCCCCCCAGTCC--------TTGGGGCGGGGGCCT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2490838 38 + 12154212 GCAACCCTGCAGCCCCCCAGTCCCTGGGGCGGGGGCCT i aotNan1.NW_018507789v1 C 0 C 0 e colAng1.NW_012116822v1 1005301 4180 - 1267912 M e manLeu1.NW_012101680v1 37096 1315 + 85016 M a score=706772.000000 s hg38.chr3_KI270784v1_alt 151718 98 + 184404 TGGAGGGCGCTGGGCACCCTCAGAGCGGCGGAGCCAAACGGAGCCTCAGCTGCGTTCCAT----------------------------------------------CGCTGGCAATTCCCCGCCTGGAGCACTTGGTGGAGAAG s panTro5.chr3 45111 98 - 202621043 TGGAGGGCGCTGGGCACCCTCAGAGCAGCGGAGCCCAACGGAGCCTCAGCTGCTGTCCAT----------------------------------------------CGCTGGCAATTCCCCGCCTGGAGCACTTGGTGGAGAAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 40064 98 - 205426864 TGGAGGGCGCTGGGCACCCTCAGAGCAGCGGAGCCCAACGGAGCCTCAGCTGCTGTCCAT----------------------------------------------CGCTGGCAATTCCCCGCCTGGAGCACTTGGTGGAGAAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 58588 98 + 508821 TGGAGGGCGCTGGGCACCCTCAGAGCAGCGGAGCCAAACGGAGCCTCAGCTGCTTTCCAT----------------------------------------------CGCTGGCAATTCCCCGCCTGGAGCACTTGGTGGAGAAG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 152696 82 - 123690457 TGGAGAGCGCTGGGCACCCTCGGAGCAG----------------CTCCGCTGCTTTCCAT----------------------------------------------CGCTGGCAATTCCCCGCCTGGAGCACTTGGTGGAGAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 22532 98 - 85730 TGGAGGGCGCGGGGCACCCTCGGAGCAGCGGAGCCAAACGGAGCCTCAGCTGCTTTCCAT----------------------------------------------CGCTGGCAATTCCCTGCCTGGAGCTCTTGGTGGAGAAT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 42725 98 - 181584905 TGGAGGGCGCGGGGCACTCTCGGAGCAGCGGAGCCAAACGGAGCCTCAGCTGCTTTCCAT----------------------------------------------CGCTGGCAATTCCCTGCCTGGAGCTCTTGGTGGAGAAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 38891 98 + 4899514 TGGAGGGCGCGGGGCACCCTCGGAGCAGTGGAGCCAAACGGAGCCTCAGCTGCTTTCCAT----------------------------------------------CGCTGGCAATTCCCTGCCTGGAGCTCTTGGTGGAGAAT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 38325 98 + 97742 TGGAGGGCGCGGGGCACCCTCGGAGCAGCGGAGCCAAACGGAGCCTCAGCTGCTTTCCAT----------------------------------------------CGCTGGCAATTCCCTGCCTGGAGCTCTTGGTGGAGAAT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3687447 97 - 108555830 TGGAGGGCTCCGGG-ACCCTCGGAGCCGCGGAGCCAAGTGGAGCCTCAGCTGCTTTCCAT----------------------------------------------CACTGGCAATTACCCTCCTGCAGCGCTTGGTGGAGAAT i chlSab2.chr12 C 0 C 0 s colAng1.NW_012116822v1 1009481 98 - 1267912 TGGAGGGTGCGGGGCATCCTCGGAGCAGCGGAGCCAAACGGAGCCTCAGCTGCTTTCCAT----------------------------------------------CGCTGGCAATTCCCTGCCTGGAGCTCTTGGTGGAGAAT i colAng1.NW_012116822v1 M 4180 C 0 s calJac3.chr18 46456492 127 - 47448759 TGGAGGGTGCCTGGC----------------AGCCAAAGGGAGCCTCAGCTGCTTTCCATTTCGGGTGACTGCCCAGTGCCCATGCCAGCGGCCCGGATCTCCCTGCGGTGGAGA-TCCTTGCCTGTAGCACTTGGTGGAGAGT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 557 97 + 8899380 TGGGGGGCGCCGGGCAGCCTCAAAGCAGCGGAGCCAAAGCGAGCCTCAGCTGCTTTCCAT----------------------------------------------CGCTGGGAA-TCCCCGCCTGGAGAACCTGGTGCAAAAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4397800 98 + 4432243 TGGAGGGCGCCGGGCAGCCTCCGAGCAGCGGAGCCAAACAGAGCCTCAGATGCTTTCCAT----------------------------------------------CCCTGGCAATTCCCCGCCTGGAGCACTTGGTAGAGAAT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2490876 98 + 12154212 TTGAGGGCCCCGGGCAGCCTCCGAGCAGCGGAGCCAGACGGAGCCTCAGATACTTTCTAT----------------------------------------------CCCTGGCAATTCCCCGCCTGGAGCACTTGGTAGAGAAT i aotNan1.NW_018507789v1 C 0 C 0 e manLeu1.NW_012101680v1 37096 1315 + 85016 M a score=1964382.000000 s hg38.chr3_KI270784v1_alt 151816 231 + 184404 TTGAGTGA-TTCAACTCACAAAGTTAAGCATATACTCGTTTAAAACGTG--GGGTCAT-----------GGAGGTGCTTAATGAGAACTCATTCCCATGTCAAAAATACCATGAGTCATGTTCAGTAGGCGGAAAGTTCTCAGA-TAAAAGCC-TG----TGTCGGTTTTACATCCGAATC----CACCCAGGTAGACAGGTTCTTTACTGGAGCTTCTTAGAGGGACACTTGGAAGTGGGAGGCGGGTTCCTTG s panTro5.chr3 45209 231 - 202621043 TTGAGTGA-TTTAACTCACAAAGTTGAGCATATACACGTTTAAAACGTG--GGGTCAT-----------GGAGGTGCTTACTGAGAACTCATTCCCATGTCAAAAATACCATGAGTCATGTTCAGCAGGCGGCAAGTTCTCAGA-TAAAAGCC-TG----TGTCGGTTTTACGTCCGAATC----CACCCAGGTAGACAGGTTCTTTACTGGAGCTTCTTAGAGGGACACTTGGAAGTGGGAGGTGGGTTCCTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 40162 231 - 205426864 TTGAGTGA-TTTAACTCGCAAAGTTGAGCATATACACGTTTAAAACGTG--GGGTCAT-----------GGAGGTGCTTACTGAGAACTCATTCCCATGTCAAAAATACCATGAGTCATGTTCAGCAGGCGGCAAGTTCTCAGA-TAAAAGCC-TG----TGTCGGTTTTACGTCCGAATC----CACCCAGGTAGACAGGTTCTTTACTGGAGCTTCTTAGAGGGACACTTGGAAGTGGGAGGTGGGTTCCTTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 58686 231 + 508821 TTGAGTGA-TTTAACTCACAAAGTTAAGCATATACACGTTTAAAACGTG--GGGTCAT-----------GGAGGTGCTTAATGAGAACTCATTCCCATGTCAAAAATACTGTGAGTCACGTTCAATAGGCGGAAAGTTCTCAGA-TAAAAGCC-TG----TGTCGGTTTTACATCCGAATC----CACCCAGGTAGCTAGGTTCTTTACTGGAGCTTCTTAGAGGGACACTTGGAAGCGGGAGGTGGGTTCCTTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 152778 231 - 123690457 TTGAGTGA-TTTAACCCACAAAGTTAAGCATATACACGTTTAAAACATG--GGGTCGT-----------GGAGGTGCTTGATGAGAGCTCATTCCCATGTCCAAAATACCATGAGTCATGTTCAGTAGGCGGAAAGTTCTCAGG-TAAAAGCC-TG----TGTCGGTTTCACATCCGAATC----CACCCAGGTAGATAGCTTCTTTACTGGAGCTTCTTAGAGCGACACATGGAAGTGGGAGGTGGGTTCCTTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 22630 231 - 85730 TTGAGTGA-TTTAATTCACAAAGTTGAGCATATACACGTTTAAAACATG--GGGTCGT-----------GGAGGTGCCCAATGAGAACTCATTCCCATGTGAAAAATACCATGAGTCATGTTCAGTAGGCGAGAAGTTCTCAGA-TAAAAGCC-TG----GGTCGGTTTTACATCCGAATC----CACCCATGTAGATAGGCTGTTTCCTGGGGCTTCTCAGAGGGACACTTGGAAGTGGGAGGTGGGTTCCTTG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 42823 231 - 181584905 TTGAGTGA-TTTAATTCACAAAGTTGAGCATATACACGTTTAAAACATG--GGGTCGT-----------GGAGGTGCCCAATGAGAACTCATTCCCATGTGAAAAATACCATGAGTCATGTTCAGTAGGCGAGAAGTTCTCAGA-TAAAAGCC-TG----GGTCGGTTTTACATCCGAATC----CACCCATGTAGATAGGCTGTTTCCTGGGGCTTCTCAGAGGGACACTTGGAAGTGGGAGGTGGGTTCCTTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 38989 231 + 4899514 TTGAGTGA-TTTAATTCACAAAGTTGAGCATATACACGTTTAAAACATG--GGGTCGT-----------GGAGGTGCCCAATGAGAACTCATTCCCATGTGAAAAATACCATGAGTCATGTTCAGTAGGCGAGAAGTTCTCAGA-TAAAAGCC-TG----GGTCGGTTTTACATCCGAATC----CACCCATGTAGATAGGCTGTTTCCTGGGGCTTCTCAGAGGGACACTTGGAAGTGGGAGGTGGGTTCCTTG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 38423 231 + 97742 TTGAGTGA-TTTAATTCACAAAGTTGAGCATATACACGTTTAAAACATG--GGGTCGT-----------GGAGGTGCCCAATGAGAACTCATTCCCATGTGAAAAATACCACGAGTCATGTTCAGTAGGCGAGAAGTTCTCAGA-TAAAAGCC-TG----GGTCGGTTTTACATCCGAATC----CACCCATGTAGATAGGCTGTTTCCTGGGGCTTCTCAGAGGGACACTTGGAAGTGGGAGGTGGGTTCCTTG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3687544 246 - 108555830 TTGAGTGA-TTTAACTCACGAAGTTAAGCATATACACGTTTAAAACACA--GGGTCATATACATGATAGGGAAATGCCTAATGAGAACTCATTCCCATGTCAAAAATACCAGGAGCCATTTTCAGTAGGCAAAGAGTTCTCAGA-TAAAACCC-TATGTCGGTTGGTTTCACATCCGAATC----CACCTAGGTAGATAGGTTCTTTACTGTGGCTTCTTAGAGGGACACTTGGAAGTGGGACGTGGGTTCCTTG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 38411 231 + 85016 TTGAGTGA-TTTAATTCACAAAGTTGAGCATATACACGTTTAAAACATG--GGGTCGT-----------GGAGGTGCCCAATGAGAACTCATTCCCATGTGAAAAATACCATGAGTCATGTTCAGTAGGCGAGAAGTTCTCAGA-TAAAAGCC-TG----GGTCGGTTTTACATCCGAATC----CACCCATGTAGATAGGCTGTTTCCTGGGGCTTCTCAGAGGGACACTTGGAAGTGGGAGGTGGGTTCCTTG i manLeu1.NW_012101680v1 M 1315 C 0 s colAng1.NW_012116822v1 1009579 231 - 1267912 TTGAGTGA-TTTAACTCACAAAGTTGAGCATATACATGTTTAAAACATG--GGGTCGC-----------GGAGGTGCCTAATGATAACTCACTCCCATGTCAAAAATACCGTGAGTCATATTCAGTAGGCGAGAAGTTCTCAGA-TAAAAGCC-TG----GGTCGGTTTTACATCCGAATC----CACCCATGTAGATAGGCTGTTTACTGGGGCTTCTCAGAGGGACACTTGGAAGTGGGAGGTGGGTTCCTTG i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46456619 242 - 47448759 TTGAGGGA-TTCAACTCACAAAGTTAAGCATATACAGGTGTAAAACATGGTGTGTCGTCCATATGATAGGAAGGTGCCTAATGAGAAC---TTCTCATGCCAAAAATATCATGAGTCATTTTCAGCAGGTGACAAGTTCTCAGA-TGAAAACCCTG----TGTCCCTTTTACACCTGAACC----TACCTATGTAGGTAGGTTCTTCACTGGGGCTTCTTACGGTGAAACTTGGAAGTGGGAGGTGGGTTCCTTG i calJac3.chr18 C 0 I 434 s saiBol1.JH378197 654 249 + 8899380 TTGAGTGAGTTTAACTCACGCACTTGAGCATATGCATGTTTAAGACATG--CTGTCATATACGTGACAGGAAAGTGCCTAATGAGAACTCATTCCCTTGTCAAAAATACCGTGAGTCATTTTCAGTAGGGGAAACGTTCTCAGCTTAAAAACCCGG----TGTCCGTTTTACATCCGAATCGTTGTAGATAGATAGATGGGTTCTTTCCTGGGACTTCTTAGAGGGAAACTCGGAAGTGGGAGGTGGGTTCCTTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4397898 215 + 4432243 TTGAGTGA-TTTGACTCACAAAGTTAAGCACATACACGTTTAAAACATC--CGGTCACATACATGATAGGGAGATGCCTAATGAGAACTCATTTCCATGTCAAAAACACCAT--GTCATTTT-----------------TCAGT----------AG----TGTCCGTTTTACATCCGAATC----CACAGATGTAGATAGATTTTTTACTGGGGCTTCTTAGAGGGAAACTTGGAAGTGGGAGGTGGGTTCCTTG i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2490974 216 + 12154212 TTGAGTGA-TTTAACTCACAAAGTTAAGCATATACAGGTTTAAAACATG--GGGTCACATACATGATAGGGAGATGCCTAATGAGAACTCATTTCCACGTCGAAAATACCATAAGTCATTT------------------TCAGT----------AG----TGTCCGTTTTACATCCGAATC----CACAGATGTAGATAGATTTTTTACTGGGGCTTCTTAGAGGGAAACTTGGAAGTGGGAGATGGGTTCCTTG i aotNan1.NW_018507789v1 C 0 C 0 a score=605570.000000 s hg38.chr3_KI270784v1_alt 152047 75 + 184404 AATGGGAAGACTCGGTTTTCTCAAAACATGAGCTCTTTCCATGTTTATCAGTTTTACATAAACCGAATGA-AAATA s panTro5.chr3 45440 75 - 202621043 AATGCGAAGGCTCAGTTTTCTCAAAACATGAGCTCTTTCCATGTTTATCAGTTTTACATAAACCGAATGA-AAATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 40393 75 - 205426864 AATGGGAAGGCTCAGTTTTCTCAAAACATGAGCTCTTGCCATGTTTATCAGTTTTACATAAACCGAATGA-AAATA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 58917 75 + 508821 AATGGGAAGACTCAGTTTTCTCAAAACATGAGCTCTTTCCATGTTTATCAGTTTTACATAAACCGAATGA-AAATA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 153009 75 - 123690457 AACGGGAAGACTCAGTTTTCTCAAAGCATGAGCTCTTTCCATGTTTATCAGTTTTACATAAACCGAATGA-AAATA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 22861 75 - 85730 AATGGGAAGACTCCGTTTTCTCAAAACATGAGCTCTTTCTATGTTTATCAGTTTTACATAAACCGAATGA-AAATA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 43054 75 - 181584905 AATGGGAAGACTCCGTTTTCTCAAAACATGAGCTCTTTCTATGTTTATCAGTTTTACATAAACCGAATGA-AAATA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 39220 75 + 4899514 AATGGGAAGACTCCGTTTTCTCAAAACATGAGCTCTTTCTATGTTTATCAGTTTTACATAAACCGAATGA-AAATA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 38654 75 + 97742 AATGGGAAGACTCCGTTTTCTCAAAACATGAGCTCTTTCTATATTTGTCAGTTTTACATAAACCGAATGA-AAATA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3687790 75 - 108555830 AATGGGAAGACTCAGTTTTCTCAAAATGTGAGCTCTTAATATGTTTATCAGTTTTACATAAACTGAATTA-AAATA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 38642 75 + 85016 AATGGGAAGACTCCGTTTTCTCAAAACATGAGCTCTTTCTATGTTTATCAGTTTTACATAAACCGAATGA-AAATA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1009810 71 - 1267912 AATGGGAAGACTCCGTTTTCTCAAAACATGAGCTC----TATGTTTATCAGTTTTACATAAACCGAATGA-AAATA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 903 71 + 8899380 AATGGAAAGACT-CACTTTCCTAAAATGTGAGCTC----TATGTTTATCAGTTTTCCTTAAACCAAATGATAAATA i saiBol1.JH378197 C 0 I 332 s cebCap1.NW_016107581v1 4398113 71 + 4432243 AATGGGAAGACTCCGTTTTCTCAAAATGTGAGCTC----TATGGTTATCACTTTTACATAAACCGAATGA-AAATA i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2491190 71 + 12154212 AATGGGAAGACTCCGTTTTCTCAAAATGTGAGCTC----TATGGTTATCAGTTTTACATAAACCGAATGA-AAATA i aotNan1.NW_018507789v1 C 0 C 0 e calJac3.chr18 46456861 434 - 47448759 I a score=3423968.000000 s hg38.chr3_KI270784v1_alt 152122 479 + 184404 TCAAGGATTTATCATTTTTG-CACGACATCTGCTG----TCTTAATATTGTGATGACATTTAAAAATTTTTATAATGGAGTGAAAAAAAGACTTGCTCCTCTAGATATCAAAATGTGCTATTAATTCCCAC----AATTATTTACTATCAGCTGAAAAGAC--ATAAATACATGGAACAGAAT-GGAAACCCAGAAACACTGAAATATATGTAAGATATAGATGTAAGGACTGATAATGGTAACATTTCAGATGAGTAGGAAGGGTTGAGTTGTTAATAAAATGCCTGCTCTTTGAAGAAAACTAATGAAATTTTATGTCACAAAAATGAGTTCCTGATGGAATACAGATTGAATTTTTTACATATGCAAAATGAGAAAAGTACCAGAAGAAAACACAAATGCTTATTTATACAGGTACATTTTACATTGCC-AAAGGCCTTCCTAAGAATGACCTCACAAGCAGGCATTCTGAAGGTTGATTTAGCAAACT s panTro5.chr3 45515 479 - 202621043 TCAAGGATTTATCATTTTTG-CACGACATCTGCTG----TCTTACTATTGTGATGACATTTAAAAATTTTTATAACGGAGTGAAAAAAAGACTTGCTCCTCTAGATATCAAAATGTGCTACTAATTCCCAG----AATTATTTACTAACAGCTGAAAAGAC--ATAAATACATGGAACAGAAT-GGAAACCCAGAAACACTGAAATATATGTAAGATATAGATGTAAGGACTGATAATGGTAACATTTCAGATGAGTAGGAAGGGTTGAGTTGTTAATAAAATGCCTGCTCTTTGAAGAAAACTAATGAAATTTTATGTCACAAAAATGAGTTCCTGATGGAATACAGATTGAAATTTTTACATATGCAAAATGAGAAAAGTACCAGAAGAAAACACATATGCTTATTTATACACGTACATTTTACATTGCC-AAAGGCCTTCCTAAGAATGACCTCACAAGCAGGCATTCTGAAGGTTGATTTAGCAAACT i panTro5.chr3 C 0 C 0 s panPan2.chr3 40468 463 - 205426864 TCAAGGATTTATCATTTTTG-CACGACATCTGCTG----TCTTACTATTGTGATGACATTTAAAAATTTTTATA----------------TCTTGCTCCTCTAGATATCAAAATGTGCTACTAATTCCCAC----AATTATTTACTAACAGCTGAAAAGAC--ATAAATACATGGAACAGAAT-GGAAACCCAGAAACACTGAAATATATGTAAGATATAGATGTAAGGACTGATAATGGTAACATTTCAGATGAGTAGGAAGGGTTGAGTTGTTAATAAAATGCCTGCTCTTTGAAGAAAACTAATGAAATTTTATGTCACAAAAATGAGTTCCTGATGGAATACAGATTGAAATTTTTACATATGCAAAATGAGAAAAGTACCAGAAGAAAACACAAATGCTTATTTATACAGGTACCTTTTACATTGCC-AAAGGCCTTCCTAAGAATGACCTCACAAGCAGGCATTCTGAAGGTTGATTTAGCAAACT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 58992 462 + 508821 TCAAGGATTTATCATTTTTG-CACGACATCTGCTG----TCTTACTATTGTGATGACATTTAAACATTTTTATAACGGAGTGAAAAAAAGACTTGCTCCTCTAGATATCAAAATGTGCTATTAATTCCCGC----AATTATTTACTAACAGCTGAAAAGAC--ATAAATACATGGAACAGAAT-GGAAACCCAGAAACACTGAAATATATGTAAGATATAGATGTAAGGACTGATAATGGTAACATTTCAGATGAGTAGGAAGGGTTGAGTTGTTAATAAAATGCCTGCTCTTTGAAGAAAACTAATGAAATTTTATGTCACAAAAATGAGTTCCTGATGGAATACAGATTGAAATTTTTACATATGCAAAATGAGAAAAGTACCAGAAGAAAACACAAATGCTTATTTATACAGGTACATTTTACATGGCC-ATAGGCCTTCCTA-----------------AGGCATTCTGAAGGTTGATTTAGCAAACT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 153084 475 - 123690457 TCAAGGATTTATCATTTTTG-CATGACACCTGCTG----TCTTACTATTGTGATGACATTTAAAAATTTTTATG----AGTGAAAAAAAGACTTGCTCCTCTAGATATCAAAATGTGCTATTAATTCCCAC----AATTATTTACTAACAGCTGAAAAGAC--ATAAATACATGGAACAGAAT-GGAAATCCAGAAACACTGAAATATATGTAAGATATAGATGTAAGGATTGATAATGGTAACATTTCAGATGAGTAGGAAGGGTTGAGTTATTAATAAAATGCCTGCTCTTTGAAGAAAACTAATGAAATTTTATGTCACAAAAATGAGTTCCTGATGGAATACAGATTGAAACTTTTACATATGCAAAATGAGAAAAGTACCAGAAGAAAACACAAATGCTTATTTATACAGGTACATTTTACATTGCC-AAAGGCCTTCCTAAGAATGACCTCACAAGCAGGCATTCTGAAGGTTGATTTAGCAAACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 22936 478 - 85730 TCAAGGATTTATCATTTTTG-CATGACACCTGCTGTCTATCTTACTATTGTGATGACATTTAAAAATTTTTATAACGGAGTG--AAAAAGACTTGCTCCTCTAGATATCAAAATGTGCTATTAATTCCCAC----AATTGTTTACTAACAGCTGAAAAGAC--ATAAGTACATGGGACAGAAT-GGAAATCCAGAAACACTGAAATACATATAAGATATAGCTGTAAGGATTGATAATGGTAACATTTCAGATGAGTAGGAAGGGTTGAGTTAT---TAAAATGCCTGCTGTTTGAGGAAAACTAATGAAATTTTATGTCACAAAAATGAGTTCCTGATGGAATACAGATTGAAATTTTTACACATGCAAAATGAGAAAAGTACCAGAAGAAAACACAAATGCTTATTTATACAGGTACATTTTACTTTGCC-AAAGGCCTTCCTGAGAATGACCTCACAAGCAGGCATTCTGAAGGTTGATTTAGCAAACT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 43129 478 - 181584905 TCAAGGATTTATCATTTTTG-CATGACACCTGCTGTCTATCTTACTATTGTGATGACATTTAAAAATTTTTATAACGGAGTG--AAAAAGACTTGCTCCTCTAGATATCAAAATGTGCTATTAATTCCCAC----AATTGTTTACTAACAGCTGAAAAGAC--ATAAGTACATGGGACAGAAT-GGAAATCCAGAAACACTGAAATACATATAAGATATAGCTGTAAGGATTGATAATGGTAACATTTCAGATGAGTAGGAAGGGTTGGGTTAT---TAAAATGCCTGCTCTTTGAGGAAAACTAATGAAATTTTATGTCACAAAAATGAGTTCCTGATGGAATACAGATTGAAATTTTTACACATGCAAAATGAGAAAAGTACCAGAAGAAAACACAAATGCTTATTTATACAGGTACATTTTACTTTGCC-AAAGGCCTTCCTGAGAATGACCTCACAAGCAGGCATTCTGAAGGTTGATTTAGCAAACT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 39295 478 + 4899514 TCAAGGATTTATCATTTTTG-CATGACACCTGCTGTCTATCTTACTATTGTGATGACATTTAAAAATTTTTATAACGGAGTG--AAAAAGACTTGCTCCTCTAGATATCAAAATGTGCTATTAATTCCCAC----AATTGTTTACTAACAGCTGAAAAGAC--ATAAGTACATGGGACAGAAT-GGAAATCCAGAAACACTGAAATACATATAAGATATAGCTGTAAGGATTGATAATGGTAACATTTCAGATGAGTAGGAAGGGTTGGGTTAT---TAAAATGCCTGCTCTTTGAGGAAAACTAATGAAATTTTATGTCACAAAAATGAGTTCCTGATGGAATACAGATTGAAATTTTTACACATGCAAAATGAGAAAAGTACCAGAAGAAAACACAAATGCTTATTTATACAGGTACATTTTACTTTGCC-AAAGGCCTTCCTGAGAATGACCTCACAAGCAGGCATTCTGAAGGTTGATTTAGCAAACT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 38729 478 + 97742 TCAAGGATTTATCATTTTTG-CATGACACCTGCTGTCTATCTTACTATTGTGATGACATTTAAAAATTTTTATAACGGAGTG--AAAAAGACTTGCTCCTCTAGATATCAAAATGTGCTATTAATTCCCAC----AATTGTTTACTAACAGCTGAAAAGAC--ATAAGTACATGGGACAGAAT-GGAAATCCAGAAACACTGAAATACATGTAAGATATAGCTGTAAGGATTGATAATGGTAACATTTCAGATGAGTAGGAAGGGTTGGGTTAT---TAAAATGCCTGCTCTTTGAGGAAAACTAATGAAATTTTATGTCACAAAAATGAGTTCCTGATGGAATACAGATTGAAATTTTTACACATGCAAAATGAGAAAAGTACCAGAAGAAAACACAAATGCTTATTTATACAGGTACATTTTACTTTGCC-AAAGGCCTTCCTGAGAATGACCTCACAAGCAGGCATTCCGAAGGTTGATTTAGCAAACT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3687865 475 - 108555830 TCAAGGTTTTATGATTTGTG-CATGACACTTGCTG----TCTTACTATTGTGATGACTTTTAAAAATGTTTATAATGGAGTG---AAAAGACTTG---CTCTAGATATCAAAACGTGCTATTAATTCCCACAATTAATTATTTACTAACAGCCGAAA--AC--ACAAATAAATGGAACAGAATAGGAAATCCAAAAACACTGAAATATATGCAAGATATATGCATAGGGATTAATAATGGTAACATTTCAGATAAGTAGGAAAGGATGAGTTATTAATAAAATGCCTGCTGTGTGAAGAAAACTAATGAAACTTTATGTCACAAAAATGAGTTCCCGATGGAATTTAGACTGAAATTTTTACATA-GCAAAATGAGAAAAGTACCAGAACAAAACACAAAGACTTATTTATAAAGGTACATTTCACGTTAAC-AAAGGCCTTCCTAAGAATGACCTTGCAAGCAGGCATTCTGAAAGTTGATTTAGCAAACT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 38717 478 + 85016 TCAAGGATTTATCATTTTTG-CATGACACCTGCTGTCTATCTTACTATTGTGATGACATTTAAAAATTTTTATAACGGAGTG--AAAAAGACTTGCTCCTCTAGATATCAAAATGTGCTATTAATTCCCAC----AATTGTTTACTAACAGCTGAAAAGAC--ATAAGTACATGGGACAGAAT-GGAAATCCAGAAACACTGAAATACATGTAAGATATAGCTGTAAGGATTGATAATGGTAACATTTCAGATGAGTAGGAAGGGTTGGGTTAT---TAAAATGCCTGCTCTTTGAGGAAAACTAATGAAATTTTATGTCACAAAAATGAGTTCCTGATGGAATACAGATTGAAATTTTTACACATGCAAAATGAGAAAAGTACCAGAAGAAAACACAAATGCTTATTTATACAGGTACATTTTACTTTGCC-AAAGGCCTTCCTGAGAATGACCTCACAAGCAGGCATTCTGAAGGTTGATTTAGCAAACT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1009881 479 - 1267912 TCAAGGATTTATCATTTTTGCCATGACACCTGCTGTCTAGCTTACTATTGTGATGACATTTAAAAATTTTTATAACGGAGTG--AAAAAGACTTGCTCCTCTAGATATCAAAATGTGCTGTTAATTCCCAC----AAGTGTTTACTAACAGCGGAAAAGAC--GTAAGTACATGGAACAGAAT-GGAAATCCAGAAACACTGAAATATATGTAAGATATAGATGTAAGTATTGATAATTGTGACATTTCAGATGAGTAGGAAGGGTTGAGTTAA---TAAAATGCCTGCTCTTTGAGGAAAACTAACAAAATTTTATGTCACAAAAATGAGTTCCTGGTGGAATATAGATTGAAATTTTTACACATGCAAAATGAGAACAGTACCAGAAGAAAACACAAATGCTTATTTATACAGGTACGTTTTACTTTGCC-AAAGGCCTTCCTGAGAATGACCTCACAAGCAGGCATTCTGAAGGTTGATTTAGCAAACT i colAng1.NW_012116822v1 C 0 C 0 s cebCap1.NW_016107581v1 4398184 479 + 4432243 TCAAGGTTTTATCATTTTTG-CATGACATTTGCTA----TCTT----TTGTGATGACA-TTAAAAATTTTTATAACGGAGTG--AAAaagacttgctcctctagatatcaaaatgtgctgttaattcccacaattaattatatacaaccagctgaaaagatagataaatacatggaacaaaatagaaaatccagaaacaCTGAAATATATGTAAGATATATATGTAGGGATTGATAATGGTAACATTTCAGATGAGCAGCAAAGGATGAGTTATGAATAAAATGCCTGCTGTGTGAAGAAAACTAATGAAATTTTATAGCACAAAAATGAGTTCCTGATGGAATACAGATTGAAATTTTTACGTATGCAAAATGAGAAACATGCCAGAAGAAAACACAAATTCATATTTATACAGGTACATTTTACGTTGAC-AAAAGCCATCCTAAGAATGACTTCACAAGCAGACATTCTGAAGGTTGATTTAGCCAACT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2491261 481 + 12154212 TCAGGCTTTTATCATTTTTG-CATGACACTTGCTA----TCTT----TTGTGATGACA-TTAAAAATTTTTATCATGGAGTG-AAAAAAGACTTGCTCCTCTAGATACCAAAATGTGCTGTTAATTCCCACAATTAATTATTTACTACCAGCTGAAAAGATAGATAAATACATGAAACAGAATAGAAAATCCATAAACACTGAAATATATGTAAGATATAGATGTAGGGGCTGATAATGGTAGATTTTCAGATGAGTAGCAAAGGATGAGTTATGAATAAAATGCCTGCTGTGTGAAGAAAACTAATGAAATTTTATGGCACAAAAATGAGTTCCTGATGGAATACAGATTGAAATTTTTACATATGCAAAATGAGAAAAGTACCAGAAGAAAACACAAATTCTTATTTATACAGATACATTTTACGTTGACAAAAAGCCTTCCAAAGAATGACTTCACAAGCAGGCATTCTGAAGGTTAATTTAGCCAACT i aotNan1.NW_018507789v1 C 0 C 0 e calJac3.chr18 46456861 434 - 47448759 I e saiBol1.JH378197 974 332 + 8899380 I a score=97625.000000 s hg38.chr3_KI270784v1_alt 152601 16 + 184404 AAAAATTAAAACCCCC s panTro5.chr3 45994 16 - 202621043 AAAAATTAAAACCCCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 40931 16 - 205426864 AAAAATTAAAACCCCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 59454 16 + 508821 AAAAATTAAAACCCCC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 153559 16 - 123690457 AAAAATTAAAACCCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 23414 16 - 85730 AAAAATTAAAACCCCC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 43607 16 - 181584905 AAAAATTAAAACCCCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 39773 16 + 4899514 AAAAATTAAAACCCCC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 39207 16 + 97742 AAAAATTAAAACCCCC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3688340 16 - 108555830 AAAAATTAAAATCCCC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 39195 16 + 85016 AAAAATTAAAACCCCC i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1010360 16 - 1267912 AAAAATTAAAACCCCC i colAng1.NW_012116822v1 C 0 C 0 e aotNan1.NW_018507789v1 2491742 0 + 12154212 C e cebCap1.NW_016107581v1 4398663 0 + 4432243 C e calJac3.chr18 46456861 434 - 47448759 I e saiBol1.JH378197 974 332 + 8899380 I a score=364559.000000 s hg38.chr3_KI270784v1_alt 152617 78 + 184404 Aggccaggcgcagtagctcacgcctgtaatcccagcactttgagaggctgaggtgggcggatcatgaggtcaggagat s panTro5.chr3 46010 78 - 202621043 Aggccaggcgcagtagctcacgcctgtaatcccagcactttgggaggctgaggtgggcggatcatgaggtcaggagat i panTro5.chr3 C 0 C 0 s panPan2.chr3 40947 78 - 205426864 Aggccaggcgcagtagctcacgcctgtaatcccagcactttgggaggctgaggtgggcggatcatgaggtcaggagat i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 59470 78 + 508821 Aggccaggcgcagtacctcacgcctgtaatcccagcactttgggaggctgaggtgggcggatcatgaggtcaggagat i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 153575 74 - 123690457 Aggccaggcgcagtggctcatgcctgtaatcccagcactt----gggctgaggtgggcggatcatgaggtcaggagat i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 23430 78 - 85730 Agactgggcgtggtggctcacacctgtaatcccagcactttgggaggctaaggtgggcggatcatgaggtcaggagat i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 43623 78 - 181584905 Agactgggcgtggtggctcacacctgtaatcccagcactttgggaggctaaggtgggcggatcatgaggtcaggagat i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 39789 78 + 4899514 Agactgggcgtggtggctcacacctgtaatcccagcactttgggaggctaaggtgggcggatcatgagctcaggagat i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 39223 78 + 97742 Agactgggcgtggtggctcacacctgtaatcccagcactttgggaggctaaggtgggcggatcatgaggtcaggagat i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 39211 78 + 85016 Agactgggcgtggtggctcacacctgtaatcccagcactttgggaggctaaggtgggtggatcatgaggtcaggagat i manLeu1.NW_012101680v1 C 0 I 1832 s colAng1.NW_012116822v1 1010376 78 - 1267912 Agactgggcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcggatcatgaggtcaggagat i colAng1.NW_012116822v1 C 0 C 0 e aotNan1.NW_018507789v1 2491742 0 + 12154212 C e cebCap1.NW_016107581v1 4398663 0 + 4432243 C e calJac3.chr18 46456861 434 - 47448759 I e saiBol1.JH378197 974 332 + 8899380 I e chlSab2.chr12 3688356 0 - 108555830 C a score=529863.000000 s hg38.chr3_KI270784v1_alt 152695 141 + 184404 cgagaccatcctggctaacacagtgaaaccccatctctactaaaaatacaaaaaatgaacctggcatggtggcacgcgcctgtagtcccagctagtcggga----ggctgaggcaggagaatcacttgaacctgggaggtggagg s panTro5.chr3 46088 141 - 202621043 caagaccatcctggctaacacactgaaacctcatctctactaaaaatacaaaaaatgaacctggcatggtggcacgcgcctgtagtcccagatagtcggga----ggctgaggcaggagaatcacttgaacctgggaggtggagg i panTro5.chr3 C 0 C 0 s panPan2.chr3 41025 141 - 205426864 caagaccatcctggctaacacactgaaacctcatctctactaaaaatacaaaaaatgaacctggcatggtggcacgcgcctgtagtcccagatagtcggga----ggctgaggcaggagaatcacttgaacctgggaggtggagg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 59548 141 + 508821 cgagaccatcctggctaacacagtgaaaccccatctctactaaaaatacaaaaaatgaacctggcatggtggcacgtgcctgtagtcccagctagtcggga----ggctgaggcaggagaatcacttgaacctgggaggtggagg i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 153649 141 - 123690457 cgagaccatcctggctaacacagtgaaaccccatctctactaaaaatacaaaaaatgaacctggcatggtggcacgcacctgtagtcccagctactcggga----ggctgaggcaggagaatcacttgaacctgggagatggagg i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 23508 141 - 85730 cgagaccatccttgctaacacagtgaaaccccgtctctactaaaaatattaaaaattagcctggcgaggtggcacgtgcctgtagtcccagctactcggga----ggctgaggcaggagaatcacttgaacctgggaggcggagg i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 43701 141 - 181584905 cgagaccatccttgctaacacagtgaaaccccgtctctactaaaaatattaaaaattagcctggcgaggtggcacgtgcctgtagtcccagctactcggga----ggctgaggcaggagaatcacttgaacctgggaggcggagg i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 39867 141 + 4899514 cgagaccatccttgctaacacagtgaaaccccgtctctactaaaaatattaaaaattagcctggcgaggtggcacgtgcctgtagtcccagctactcggga----ggctgaggcaggagaatcacttggacctgggaggcggagg i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 39301 145 + 97742 agagaccatccttgctaacacagtgaaaccccgtctctactaaaaatattaaaaattagcctggcgtggtggcacgtgcctgtagtcccagctactcgggaggctggctgaggaaggagaatcactttgaacctggaggtggagg i cerAty1.NW_012005170v1 C 0 C 0 s colAng1.NW_012116822v1 1010454 141 - 1267912 agagaccatccttgctaatacagtgaaaccccgtctctactaaaaatattaaaaattagcctggcgtggtggcacgcgcctgtagtcccagctactcggga----ggctgaggcaggagaatcacttgaacctgggaggtggagG i colAng1.NW_012116822v1 C 0 M 1085 e aotNan1.NW_018507789v1 2491742 0 + 12154212 C e cebCap1.NW_016107581v1 4398663 0 + 4432243 C e calJac3.chr18 46456861 434 - 47448759 I e saiBol1.JH378197 974 332 + 8899380 I e manLeu1.NW_012101680v1 39289 1832 + 85016 I e chlSab2.chr12 3688356 0 - 108555830 C a score=47328.000000 s hg38.chr3_KI270784v1_alt 152836 15 + 184404 tt--gcagtgagccgag s panTro5.chr3 46229 15 - 202621043 tt--gcagtgagccgag i panTro5.chr3 C 0 C 0 s panPan2.chr3 41166 15 - 205426864 tt--gcagtgagccgag i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 59689 15 + 508821 tt--gcagtgagccgag i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 153790 15 - 123690457 tt--gcagtgagccaag i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 23649 15 - 85730 tt--gcagtgagccgag i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 43842 15 - 181584905 tt--gcagtgagccgag i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 40008 15 + 4899514 tt--gcagtgagccgag i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 39446 17 + 97742 ttgcgcagtgagccgag i cerAty1.NW_012005170v1 C 0 I 49 e aotNan1.NW_018507789v1 2491742 0 + 12154212 C e cebCap1.NW_016107581v1 4398663 0 + 4432243 C e calJac3.chr18 46456861 434 - 47448759 I e saiBol1.JH378197 974 332 + 8899380 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e manLeu1.NW_012101680v1 39289 1832 + 85016 I e chlSab2.chr12 3688356 0 - 108555830 C a score=83515.000000 s hg38.chr3_KI270784v1_alt 152851 54 + 184404 atcgcgccactgcacttcagcctgggtgacagagcgagactctgtctcaa-----aaaa--- s panTro5.chr3 46244 48 - 202621043 atcgcgccactgcattccagcc-gggtgacagagcgagactctgtctc----------a--- i panTro5.chr3 C 0 C 0 s panPan2.chr3 41181 54 - 205426864 atcgtgccactgcattccagcc-gggtgacagagcgagactctgtctcaac----aaaa--- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 59704 52 + 508821 atcgcgccactgcactccagcctgggtgacagagtgagactctgtctc-------aaaa--- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 153805 52 - 123690457 atcacaccactgcactccagcctgggtggcagagcatgactctgcctc-------aaaa--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 23664 62 - 85730 atggtgccaccgcactccagcctgggctacacagtgagactccgcctcaaaaaaaaaaaaaa i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 43857 62 - 181584905 atggtgccaccgcactccagcctgggctacacagtgagactccgcctcaaaaaaaaaaaaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 40023 55 + 4899514 atggtgccaccgcactccagcctgggctacacagtgagactccgcctc-------aaaaaaa i macNem1.NW_012020287v1 C 0 C 0 e aotNan1.NW_018507789v1 2491742 0 + 12154212 C e cebCap1.NW_016107581v1 4398663 0 + 4432243 C e calJac3.chr18 46456861 434 - 47448759 I e cerAty1.NW_012005170v1 39463 49 + 97742 I e saiBol1.JH378197 974 332 + 8899380 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e manLeu1.NW_012101680v1 39289 1832 + 85016 I e chlSab2.chr12 3688356 0 - 108555830 C a score=18680.000000 s hg38.chr3_KI270784v1_alt 152905 6 + 184404 aaaaaa s panTro5.chr3 46292 6 - 202621043 aaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 41235 6 - 205426864 aaaaaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 59756 6 + 508821 aaaaaa i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 153857 6 - 123690457 aaaaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 23726 6 - 85730 aaaaaa i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 43919 6 - 181584905 aaaaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 40078 6 + 4899514 agaaaa i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 39512 6 + 97742 aaaaaa i cerAty1.NW_012005170v1 I 49 C 0 e aotNan1.NW_018507789v1 2491742 0 + 12154212 C e cebCap1.NW_016107581v1 4398663 0 + 4432243 C e calJac3.chr18 46456861 434 - 47448759 I e saiBol1.JH378197 974 332 + 8899380 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e manLeu1.NW_012101680v1 39289 1832 + 85016 I e chlSab2.chr12 3688356 0 - 108555830 C a score=67952.000000 s hg38.chr3_KI270784v1_alt 152911 17 + 184404 aaaaaTTAAAACCCCCC s panTro5.chr3 46298 17 - 202621043 aaaaaTTAAAACCCCCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 41241 17 - 205426864 aaaaaTTAAACCCCCCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 59762 17 + 508821 aaaaaTTAAAACCCCCC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 153863 17 - 123690457 aaaaaTTAAAACCCCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 23732 17 - 85730 aaaaaTTAAAACCCACC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 43925 17 - 181584905 aaaaaTTAAAACCCACC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 40084 17 + 4899514 aaaaaTTAAAACCCACC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 39518 17 + 97742 aaaaaTTAAAACCCACC i cerAty1.NW_012005170v1 C 0 C 0 s cebCap1.NW_016107581v1 4398663 16 + 4432243 AAAAATTAAAACCTCC- i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2491742 16 + 12154212 AAAAATTAAAACCTCC- i aotNan1.NW_018507789v1 C 0 C 0 e calJac3.chr18 46456861 434 - 47448759 I e saiBol1.JH378197 974 332 + 8899380 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e manLeu1.NW_012101680v1 39289 1832 + 85016 I e chlSab2.chr12 3688356 0 - 108555830 C a score=756422.000000 s hg38.chr3_KI270784v1_alt 152928 223 + 184404 TGTGTA-TAAGAAAAAAATTAACAAACGATAACATACTTGAAAAATATTTACTATGTATATGTTTTTACTAATATATATAT----AAATAGATATTCAGATGAAAAGTGTATCTTCATCCTACAGGGAATTTACTTTTTATTATATATA------------TTATG----------ATATATAAC--------TGATTATACATATAAAAAATTGTATATAATAGTGACATAATGT----TATATATATCAGTTATTTATAT s panTro5.chr3 46315 214 - 202621043 TGTGTA-TAAG----AAATTAACAAACGATAACATACTTGAAAAATATTTACTATGTATATGTTTTTACTAATATATATAT----AAATAGATATTCAGATGAAAAGTGTA-CTTCATCCTACAGGGAATTTACTTTTTATTATATATA------------TTATG----------ATATATAAC--------TGATTATACATATAAAAAATTGTATATAATACTGATATAATGT----TATATATATC----ATTTATAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 41258 214 - 205426864 TGTGTA-TAAG----AAATTAACAAACGATAACATACTTGAAAAATATTTACTATGTATATGTTTTTACTAATATATATAT----AAATAGATATTCAGATGAAAAGTGTA-CTTCATCCTACAGGGAATTTACTTTTTATTATATATA------------TTATG----------ATATATAAC--------TGATTATACATATAAAAAATTGTATATAATACTGATATAATGT----TATATATATC----ATTTATAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 59779 220 + 508821 TGTGTA-TAAGAAAAAAATTAACAAACGATAACATACTTGAAAAATATTTACTATGTATATGTTTTTACTAATATATATAT--AGAGAGAGAGATTCAGATGAAAAGTGTATCTTCATCCTACAGGGAATTTACTTTTtattatatata------------t---------------tatataac--------tgattatacatataaaaaattgtatataatactgatataatgt----tatatatatcagttatttatat i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 153880 222 - 123690457 TGTGTA-TCAGAAAAAAATTAACAAACAATAACATACTTGAAAAATATTTACTATGTATATGTTTTTACTGATATATATATATATAAATAGATATTCAGATGAAAAGTGTATCTTCATCCTACAGGGAATTTACTTTCTATTATATATA------------TCATG----------ATATATAAC--------TGATTATACATATAAAAAATTGTATATAATACTGATATG---------TTATATATCGGTTATATATAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 23749 201 - 85730 TGTGTG-TCAGAAAAAAATTAACAAAAGATAACATACTTGAAAAGTATTTACTATGTATATGTTTTTACTAATATATAT--------ATAGATATTCAGATGAAAAGTATATTTTAATCCTACAGAGAATTTATTTTTTAT--TATATA------------TTATT----------ATATATAAC----------AATATACATATAAAGAATTGTATAGATTACTGATATAATA-----TATATATA-------------C i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 43942 201 - 181584905 TGTGTG-TCAGAAAAAAATTAACAAAAGATAACATACTTGAAAAGTATTTACTATGTATATGTTTTTACTAATATATAT--------ATAGATATTCAGATGAAAAGTATATTTTAATCCTACAGAGAATTTATTTTTTAT--TATATA------------TTATT----------ATATATAAC----------AATATACATATAAAGAATTGTATAGATTACTGATATAATA-----TATATATA-------------T i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 40101 198 + 4899514 TGTGTGTTCAGAAAAAAATTAACAAAAGATAACATACTTGAAAA-TATTACGTATGTATAT-TTTTTACTAATATATAT--------ATAGATATTCAGA--GAAAGTGTATTTTAATCCTACAGAGAATTTATTTTT--A--TATATA------------TTAT------------TATATAAC----------AATATACATATAAAGAATTGTATAGATTACTGATATATTATAG--TATATATA------------GT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 39535 207 + 97742 TGTCTG-TCAGAAAAAAATTAACAAAAGATAACATACTTGAAAAATATTTACTATGTATATGTTTTTACTAATATATATAT----AAATAGATATTCAGATGAAAAGTATATCTTAATCCTACAGAGAATTTATTTTTTAT--TATATA------------Ttatt----------atatataac----------aatatacatataaagaattgtatatattactgatataagata---tatatata-------------t i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3688356 231 - 108555830 TGTGTA-TCAGAAAAAAATTAACAGAAGATAACACACTTGAAAA-AATTTAC--TGtatatatttttactaatatataa------aaatatatatTCAACTGAAAAGTGTATCTTCATCCTACAGGGACTTTATTCTTtat--aatatg------------atattttatgagtacatatataacatatttactgattacatatataacaaattgtatatattactaatatgttatc---tatatatatc----agatatat i chlSab2.chr12 C 0 C 0 s cebCap1.NW_016107581v1 4398679 218 + 4432243 TGTGTA-TCAGAAAAAAATTAACAAAGGATAACATACTTGAAAAATATT---------TATATTTTT-CTAATATATTT------AAATCTATATTCATATGAAAAGTGTATCTTCATCCTACAGGGAATTTATTTCTTAGtatatatataatatatatatatat-----------atatatTAC--------TGATT----ATACAACAAATTATGTATGTTACTAATATAGTATGT----TATATATCAGTTATATATAT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2491758 211 + 12154212 TGTTTA-TCAGAAAAAAATTAACAAAAGATAACATACTTGAAAAATATT---------TATATTTTTACTAATATATTT------AAATCTATATTCATATGAAAACTGTATCTTCATCCTACAGGGAATTTATTCCTTATTATATATA------------ATAT-----------ATATATTAC--------TGATT----ATATAACAAATTGTACATATTACTAATATAATATGTTATATATATATCAGTTATATATAT i aotNan1.NW_018507789v1 C 0 C 0 e calJac3.chr18 46456861 434 - 47448759 I e saiBol1.JH378197 974 332 + 8899380 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e manLeu1.NW_012101680v1 39289 1832 + 85016 I a score=302764.000000 s hg38.chr3_KI270784v1_alt 153151 51 + 184404 ACAGATAAAAAGCACATC-TTTATTTTATAGGGAATTC-TTTCAAATCAAATC s panTro5.chr3 46529 51 - 202621043 ACAGATAAAAAGCACATC-TTTATTTTATAGGGAATTC-TTTCAAATCAAATC i panTro5.chr3 C 0 C 0 s panPan2.chr3 41472 51 - 205426864 ACAGATAAAAAGCACATC-TTTATTTTATAGGGAATTC-TTTCAAATCAAATC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 59999 51 + 508821 acagataAAAAGCACATC-TTTATTTTATAGGGAATTC-TTTCAAATCAAATC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154102 51 - 123690457 ACAGATATAAAGCACATC-TTTATTTTATAGGGAATTC-TTTCAAATCAAATC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 23950 51 - 85730 ACAGATAAAAAGCACATC-TTCATTTTACAGGGAATTC-TTTCAAATCAAATC i rheMac8.chrUn_NW_014858614v1 C 0 I 230 s macFas5.chr6 44143 51 - 181584905 ACAGATAAAAAGCACATC-TTCATTTTACAGGGAATTC-TTTCTAATCAAATC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 40299 53 + 4899514 ACAGATAAAAAGCACATCTTTCATTTTACAGGGAATTCTTTTCTAATCAAATC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 39742 51 + 97742 acagataaAAAGCACATC-TTCATTTTACAGGGAATTC-TTTCTAATCAAATC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3688587 51 - 108555830 acagataAAAAACACATC-TTTATTTTACAGGGAATTC-TTTCCAATCAAATC i chlSab2.chr12 C 0 C 0 s saiBol1.JH378197 1306 50 + 8899380 acacaaaaaAAAC-CACG-TTTATTTTACATGGAATTG-TTTCAAATCAAATC i saiBol1.JH378197 I 332 C 0 s cebCap1.NW_016107581v1 4398897 51 + 4432243 GCAGATAAAAAGCACATC-TTTATTTTACAGGAAATTC-TTTCAGATCAAATT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2491969 51 + 12154212 GCAGATAAAAAGTACATC-TTTATTTTACGGAGAACTC-TTTCAAATCAAATT i aotNan1.NW_018507789v1 C 0 C 0 e calJac3.chr18 46456861 434 - 47448759 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e manLeu1.NW_012101680v1 39289 1832 + 85016 I a score=450966.000000 s hg38.chr3_KI270784v1_alt 153202 88 + 184404 CACAAGAAAAGAACTCTAAAAGTGAGCAACGTACTTTTCTGCAGATCCACAAGTTACTTATGTACATAGGAAAAAGTCCTTAGTGTTT s panTro5.chr3 46580 88 - 202621043 CACAAGAAAACAACTCTAAAAGTGAGCAAAGTACTTTTTTGCAGATCCACAAGTTACTTATGTACATAGGAAAAAATCCTTAGTGTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 41523 88 - 205426864 CACAAGAAAACAACTCTAAAAGTGAGCAAAGTACTTTTTTGCAGATCCACAAGTTACTTATGTACATAGGAAAAAATCCTTAGTGTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60050 88 + 508821 CACAAGAAAAGAACACTAAAAGTGAGCAAAGTACTTTTTTGCAGATCCACAAGTTATGTATGTACATAGGAAAAAATCCTTAGTGTTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154153 88 - 123690457 AACAAGAAAAGAACTCTAAAAGTGAGCAAAGTACTTTTTTGCAGACCCAGAAGTTACTTATATACATAGGAAAAAATCCTTAGTGTTT i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 44194 88 - 181584905 CACAAGAAAAGAACTCTAAAAGTGAGCAAAGTACTGTTTTGCAGCTCCACAAGTTACGTTTGTACATATGAAAAAATCCTTAGTGTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 40352 88 + 4899514 CACAAAGAAAGAACTCTAAAAGCGAGCAAAGTACTGTTTTGCAGCTCCACAAGTTACGTTTGTACATATGAAAAAATCCTTAGTGTTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 39793 88 + 97742 CACAAGAAAAGAACTCTAAAAGTGAGCAAAGTACTGTTTTGCAGCTCCACAAGTTACGTTTGTACATATGAAAAAATCCTTAGTGTTT i cerAty1.NW_012005170v1 C 0 I 344 s chlSab2.chr12 3688638 88 - 108555830 CACAAGAAAAGAACTCTAAAAGTGAGCAAAGTACTGTTTTGCAGCTCCACAAGTTACGTTTGTACATATGAAAAAATCCTTAGTGTTT i chlSab2.chr12 C 0 C 0 s saiBol1.JH378197 1356 85 + 8899380 CACAAGAAAAGAACTCTAAAAGTGAGCAAAGTGCTTTTTTGCAGATCCACAAGTTA---ACTTACATAGGAAAAAATCCTTAGTGTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4398948 88 + 4432243 CACAAGAAAAGAACTCTAAAAGTGAACAAAGTACGTATATGCAGGCCCACAAGTTATTTATGTATGTAGGAAAAAATCCTTAGTGTTT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2492020 88 + 12154212 CACAAGAAAAGAACTCTAAAAGTGAACAAACTACTTATATGCAGACCCACAAGTTATTTATGTACATAGGAAAAAATCCTTAGTGTTT i aotNan1.NW_018507789v1 C 0 C 0 e calJac3.chr18 46456861 434 - 47448759 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e rheMac8.chrUn_NW_014858614v1 24001 230 - 85730 I e manLeu1.NW_012101680v1 39289 1832 + 85016 I a score=22029.000000 s hg38.chr3_KI270784v1_alt 153290 5 + 184404 CTCGT s panTro5.chr3 46668 5 - 202621043 CTCGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 41611 5 - 205426864 CTCGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60138 5 + 508821 CTCGT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154241 5 - 123690457 CTCGT i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 44282 5 - 181584905 CTCGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 40440 5 + 4899514 CTCGT i macNem1.NW_012020287v1 C 0 C 0 s chlSab2.chr12 3688726 5 - 108555830 CTCAT i chlSab2.chr12 C 0 C 0 s saiBol1.JH378197 1441 5 + 8899380 CTTGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4399036 5 + 4432243 CTTGT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2492108 5 + 12154212 CTTGT i aotNan1.NW_018507789v1 C 0 C 0 e calJac3.chr18 46456861 434 - 47448759 I e cerAty1.NW_012005170v1 39881 344 + 97742 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e rheMac8.chrUn_NW_014858614v1 24001 230 - 85730 I e manLeu1.NW_012101680v1 39289 1832 + 85016 I a score=39930.000000 s hg38.chr3_KI270784v1_alt 153295 8 + 184404 AAAAGAAT s panTro5.chr3 46673 8 - 202621043 AAAAGAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 41616 8 - 205426864 AAAAGAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60143 8 + 508821 AAAAGAAT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154246 8 - 123690457 AAAAGAAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 24231 8 - 85730 aaaagaaT i rheMac8.chrUn_NW_014858614v1 I 230 C 0 s macFas5.chr6 44287 8 - 181584905 AAAAGAGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 40445 8 + 4899514 AAAAGAGT i macNem1.NW_012020287v1 C 0 C 0 s chlSab2.chr12 3688731 8 - 108555830 AAGAGAAT i chlSab2.chr12 C 0 C 0 s saiBol1.JH378197 1446 8 + 8899380 AAGAGAAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4399041 8 + 4432243 GAGAGAAT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2492113 8 + 12154212 GAGAGAAT i aotNan1.NW_018507789v1 C 0 C 0 e calJac3.chr18 46456861 434 - 47448759 I e cerAty1.NW_012005170v1 39881 344 + 97742 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e manLeu1.NW_012101680v1 39289 1832 + 85016 I a score=16704.000000 s hg38.chr3_KI270784v1_alt 153303 5 + 184404 TTAAG s gorGor5.CYUI01015884v1 60151 5 + 508821 TTAAG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154254 5 - 123690457 TTAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 24239 5 - 85730 TTAAG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 44295 5 - 181584905 TTAAG i macFas5.chr6 C 0 I 307 s macNem1.NW_012020287v1 40453 5 + 4899514 TTAAG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 40225 5 + 97742 TTAAG i cerAty1.NW_012005170v1 I 344 C 0 s chlSab2.chr12 3688739 5 - 108555830 TTAAG i chlSab2.chr12 C 0 C 0 s saiBol1.JH378197 1454 5 + 8899380 TTAAG i saiBol1.JH378197 C 0 C 0 e aotNan1.NW_018507789v1 2492121 0 + 12154212 C e cebCap1.NW_016107581v1 4399049 0 + 4432243 C e calJac3.chr18 46456861 434 - 47448759 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e manLeu1.NW_012101680v1 39289 1832 + 85016 I e panPan2.chr3 41624 0 - 205426864 C e panTro5.chr3 46681 0 - 202621043 C a score=7098.000000 s hg38.chr3_KI270784v1_alt 153308 1 + 184404 T s panTro5.chr3 46681 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 41624 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60156 1 + 508821 T i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154259 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 24244 1 - 85730 T i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 44607 1 - 181584905 T i macFas5.chr6 I 307 C 0 s macNem1.NW_012020287v1 40458 1 + 4899514 T i macNem1.NW_012020287v1 C 0 I 819 s cerAty1.NW_012005170v1 40230 1 + 97742 T i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3688744 1 - 108555830 T i chlSab2.chr12 C 0 C 0 s saiBol1.JH378197 1459 1 + 8899380 T i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4399049 1 + 4432243 T i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2492121 1 + 12154212 T i aotNan1.NW_018507789v1 C 0 C 0 e calJac3.chr18 46456861 434 - 47448759 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e manLeu1.NW_012101680v1 39289 1832 + 85016 I a score=1156580.000000 s hg38.chr3_KI270784v1_alt 153309 232 + 184404 TAAAAGAGGAATGAGACTCTTTTC------------------------Tatccacaatgtttgtgagaataaacagcagtggtacttac-actgctgcctaaagtttaagttgctgatgacttttcaaatagataatttggtggtaattac-cacattttaaaaatgtatatgccatttacctatcaattccattgtattaaaatacctttagaaaatagagatacgtgtactttgtttttctcagcatttatgttaa s panTro5.chr3 46682 232 - 202621043 TAAAAGAGGAATGAGACTCTTTTC------------------------TATCCACAATGTTTGTGAGAATAAACAGCAGTGGTACTTAT-ACCGCTGCCTAAAGTTTAAGTTACTGATGACTTTTCAAATAGATAATTTGGTGGTAATTAC-CACATTTTAAAAATGTATATGCCATTTACCTATCAATTCCATTGTATTAAAATACCTTTAGAAAATAGAGATACATGTACTTTGTTTTTCTCAGCATTTATGTTAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 41625 232 - 205426864 TAAAAGAGGAATGAGACTCTTTTC------------------------TATCCACAATGTTTGTGAGAATAAACAGCAGTGGTACTTAT-ACCGCTGCCTAAAGTTTAAGTTACTGATGACTTTTCAAATAGATAATTTGGTGGTAATTAC-CACATTTTAAAAATGTATATGCCATTTACCTATCAATTCCATTGTATTAAAATACCTTTAGAAAATAGAGATACATGTACTTTGTTTTTCTCAGCATTTATGTTAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60157 232 + 508821 TAAAAGAGGAATGAGACTCTTTTC------------------------TATCCACAATGTTTGTGAGAATAAACAGCAGTGGTACTTAT-ACTGCTGCTTAAAGTTTAAGTTGCTGATGACTTTTCAAATAGATAATTTGGTGGTAATTAC-CACATTTTAAAAATGTATATGCCATTTACCTATCAATTCCATTGTATTAAAATACTTTTAGAAAATAGAGATACATGTACTTTGTTTTTCTCAGCATTTATGTTAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154260 232 - 123690457 TAAAAGAGGAATGATACTGTTTTC------------------------AATCCACAATGTTTGTGAGAATAAACAACAGTGGTACTTAT-ACTGCTGCTTAAAGTTTAAGTTGCTGATGACTTTTCAAATAGATAATTTGGTGGTAATTAC-CACATTCAAAAAATGTATATGCCATTTACCCATCGATTCCATTGTATTGAAATACCTTTAGAAAATAGAGATACATGTACTTTGTTTTTCTCAGCATTTATGTTAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 24245 238 - 85730 TAAAAGAGGAATGAGACTGTGTTCTCTTTATCCACAGACTGTGCTCTTTATCCACATTGTTTGTGAGAATAAAGAGCAGTGGTACTTAC-ACTGCTGCTTAAAGTTTAAGTTGCTGATGACTTTTCAAATAGATAATTTGGTGGTAAT-------------------TATATGCCCTTTACCTGTCAATTCCATTGTATTAAAATACCTTTAGAAAATAGAGATACATGTACTTTGTTTTTCTCAGCATTTATGTCAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 44608 238 - 181584905 TAAAAGAGGAATGAGACTGTGTTCTCTTTATCCACAGACTGTGCTCTTTATCCACATTGTTTGTGAGAATAAAGAGCAGTGGTACTTAC-ACTGCTGCTTAAAGTTTAAGTTGCTGATGACTTTTCAAATAGATAATTTGGTGGTAAT-------------------TATATGCCCTTTACCTGTCAATTCCATTGTATTAAAATACCTTTAGAAAATAGAGATACATGTACTTTGTTTTTCTCAGCATTTATGTCAA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 40231 238 + 97742 TAAAAGAGGAATGAGACTGTGTTCTCTTTATCCACAGACTGTGCTCTTTATCCACATTGTTTGTGAGAATAAAGAGCAGTGGTACTTAT-ACTGCTGCTTAAAGTTTAAGTTGCTGATGACTTTTCAAATAGATAATTTGGTGGTAAT-------------------TATATGCCCTTTACCTATCAATTTCATTGTATTAAAATACCTTTAGAAAATAGAGATACATGTACTTTGTTTTTCTCAGCATTTATGTCAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3688745 232 - 108555830 TGAAAGAGGAATGAGACTTTTTTC------------------------Tatccacaatgtttgtgagaataaagagcagtggtacttat-actgctgcttgaagtttaagttgctgatgacttttcaagtggataatttggagataattac-cacattttaaaaatgtatatgccctttgtccatcaattccattGTATTAAAATACCTTTAGAAAATAGAGATACATGCACTTTGTTTTTCTCAGCATTTATGTTAA i chlSab2.chr12 C 0 I 1629 s saiBol1.JH378197 1460 233 + 8899380 TAAAAGAGGAATGAGACTGTTTTC------------------------Tatccacagtgtttgtgagaataaagagcagtggtacttat-actgctgcttaaagtttaagttgctgataacttttcaaggagacaatttggtggtaattacaccaaattgaaaaatgcatacgccctttactcatcaattccattATATTAAAATGCGTTTAGAAAGTAGAGATACATGCATTTTGTTTTTCTTAGCATTTATGTTAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4399050 232 + 4432243 TAAAAGGGGAAGGAGACTGTTTTC------------------------TATCCACAATGTCTGTGAAACTAAGACGCAGTGATACTTAA-ACTGCTGCTTAAAGTTTAAGTTGCTGATGACTTTTCTAGTAGATAATTTGGTGGTAATTAC-CACACTCTTAAAATGTATATGCCTTTTAACCATCAATTCCATTATATTAAAATACCTTTAGAAAATAGAGATACATGCACTTTGTTTTTCTCAGCATTTATGTTAA i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2492122 233 + 12154212 TAAAAGGGGAATGAGACTGTTTTC------------------------TATCCACAATGTTTGTGAAAATAAAACACAGTGATACTTAACCCTGCTGCTTAAAGTTTAAGTTGCTGATGACTTTTCAAGTAGATAATTTGGTGGCAATTAC-CCTACTTTTAAAATGTATATGCCTTTTACCCATCAATTCCATTATATTAAAATACCTTTAGAAAATAGAGATACATGCACTTTGTTTTTCTCAGCATTTATGTTAA i aotNan1.NW_018507789v1 C 0 C 0 e calJac3.chr18 46456861 434 - 47448759 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e manLeu1.NW_012101680v1 39289 1832 + 85016 I e macNem1.NW_012020287v1 40459 819 + 4899514 I a score=36889.000000 s hg38.chr3_KI270784v1_alt 153541 9 + 184404 aaagaaccc s panTro5.chr3 46914 9 - 202621043 AAAGAACCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 41857 9 - 205426864 AAAGAACCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60389 9 + 508821 AAAGAACCC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154492 9 - 123690457 AAAGAACCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 24483 9 - 85730 CAAGAGCCC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 44846 9 - 181584905 CAAGAGCCC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 40469 9 + 97742 CAAGAGCCC i cerAty1.NW_012005170v1 C 0 C 0 s saiBol1.JH378197 1693 9 + 8899380 CAAGAACCC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4399282 9 + 4432243 CAGGAACCC i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2492355 9 + 12154212 CAAGAACCC i aotNan1.NW_018507789v1 C 0 I 1574 e calJac3.chr18 46456861 434 - 47448759 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e manLeu1.NW_012101680v1 39289 1832 + 85016 I e chlSab2.chr12 3688977 1629 - 108555830 I e macNem1.NW_012020287v1 40459 819 + 4899514 I a score=27446.000000 s hg38.chr3_KI270784v1_alt 153550 8 + 184404 tcagaatg s panTro5.chr3 46923 8 - 202621043 TCAGAATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 41866 8 - 205426864 TCAGAATG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60398 8 + 508821 TCAGAATG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154501 8 - 123690457 TCAGAATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 24492 8 - 85730 ACAGAATG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 44855 8 - 181584905 ACAGAATG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 40478 8 + 97742 ACAGAATG i cerAty1.NW_012005170v1 C 0 C 0 s saiBol1.JH378197 1702 8 + 8899380 ATAGAATG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4399291 8 + 4432243 ACAGAATG i cebCap1.NW_016107581v1 C 0 I 1633 e aotNan1.NW_018507789v1 2492364 1574 + 12154212 I e calJac3.chr18 46456861 434 - 47448759 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e manLeu1.NW_012101680v1 39289 1832 + 85016 I e chlSab2.chr12 3688977 1629 - 108555830 I e macNem1.NW_012020287v1 40459 819 + 4899514 I a score=198685.000000 s hg38.chr3_KI270784v1_alt 153558 75 + 184404 tgtcctataaataagtttcagttgcatccataggatggaataatatgtgaccattgaaagtgaCAATAGATATAG s panTro5.chr3 46931 75 - 202621043 TGTCCTATAAATAAGTTTCAGTTGCATCCATAGGATGGAATAATATGTGACCATTGAAAGTGACAATAGATATAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 41874 75 - 205426864 TGTCCTATAAATAAGTTTCAGTTGCATCCATAGGATGGAATAATATGTGACCATTGAAAGTGACAATAGATATAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60406 75 + 508821 TGTCCTATAAATAAGTTTCAGTTGCATCCATAGGATGGAATAATATGTGACCACTGAAAGTGACAATAGATATAG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154509 75 - 123690457 TGTCCTATAAATAAGTTTCAGTTGTATCCATAGGATGCAGTAATATGTGACCATTGAAAGTGACAATAGATATAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 24500 75 - 85730 TGTCCTATAAATAAGTTTCAGTTGCATCCATAGGATGGAATAATATGTGACCATTGAAGGTGACAATAGATATAG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 44863 75 - 181584905 TGTCCTATAAATAAGTTTCAGTTGCATCCATAGGATGGAATAATATGTGACCATTGAAGGTGACAATAGATATAG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 40486 75 + 97742 TGTCCTATAAATAAGTTTCAGTTGCATCCATAGGATGGAATAATATGTGACCATTGAAGGTGACAATAGATATAG i cerAty1.NW_012005170v1 C 0 C 0 s saiBol1.JH378197 1710 34 + 8899380 -----------------------------------------AATAGGTGACCACTGAAGATGGCAGTAAGTATAG i saiBol1.JH378197 C 0 I 1581 e aotNan1.NW_018507789v1 2492364 1574 + 12154212 I e cebCap1.NW_016107581v1 4399299 1633 + 4432243 I e calJac3.chr18 46456861 434 - 47448759 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e manLeu1.NW_012101680v1 39289 1832 + 85016 I e chlSab2.chr12 3688977 1629 - 108555830 I e macNem1.NW_012020287v1 40459 819 + 4899514 I a score=454238.000000 s hg38.chr3_KI270784v1_alt 153633 182 + 184404 AAGTATgggaggttcccttgatgccaggagtttgagaccagcctgggcaacaaagcaagattccttctacaggtttttttt-ataattagctgagcatgctggtgtactcttgtggtcccagctactcaggaggctgaggcaggaggatcacttgagcctaggagttccaggctgcagtgagg s panTro5.chr3 47006 183 - 202621043 AAGTATgggaggttcccttgatgccaggagtttgagaccagcctgggcaacaaagcaacattccttctacaagttttttttaataattagctgagcatgctggtgtactcttgtggtcccagctactcaggaggctgaggcaggaggatcacttgggcctaggagttccaggctgcagtgagg i panTro5.chr3 C 0 C 0 s panPan2.chr3 41949 183 - 205426864 AAGTATgggaggttcccttgatgccaggagtttgagaccagcctgggcaacaaagcaacattccttctacaagttttttttaataattagctgagcatgctggtgtactcttgtggtcccagctactcaggaggctgaggcaggaggatcacttgagcctaggagttccaggctgcagtgagg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60481 183 + 508821 AAGTATgggaggttcccttgatgccaggagtttgagaccagcctgggcaacaaagcaagattccttctacaagtttttttttataattagctgagcatgctggtgtactcttgtggtcccagctactcaggaggctgaggcaggaggatcacttgagcctaggagttccaggctgcagtgagG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154584 181 - 123690457 AAGTATgggaggttcccttgatgccaggagtttgagaccagcctgggcaacaaagcaagattctttctacaaattttttt--ataattagctgagcatgctggtgtactcctgtggtcccagctactcaggaggctgaggcaggaggatcacttgagcctaggagttccaggctgcagtgagg i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 24575 182 - 85730 AAGTATgggaggttcccttgatgccaggaatttgagaccagcctgggcaacaaaacgagattctttctacaattttttttt-ataattagttgagcatgctggtgtgctcctgtggtcctagctactcaggaggctgaggcaggaggatcacttgagcctaggagttccaggctgcagtgagg i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 44938 182 - 181584905 AAGTATgggaggttcccttgatgccaggaatttgagaccagcctgggcaacaaaacgagattctttctacaattttttttt-ataattagttgagcatgctggtgtgctcctgtggtcctagctactcaggaggctgaggcaggaggatcacttgagcctaggagttccaggctgcagtgagg i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 40561 183 + 97742 AAGTATgggaggttcccttgatgccaggaatttgagaccagcctgggcaacaaaacgagattctttctacaatttttttttaataattagctgagcatgctggtgtgctcctgtggtcctagctactcaggaggctgaggcaggaggatcacttgagcctaggagttccaggctgcagtgagg i cerAty1.NW_012005170v1 C 0 C 0 e aotNan1.NW_018507789v1 2492364 1574 + 12154212 I e cebCap1.NW_016107581v1 4399299 1633 + 4432243 I e calJac3.chr18 46456861 434 - 47448759 I e saiBol1.JH378197 1744 1581 + 8899380 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e manLeu1.NW_012101680v1 39289 1832 + 85016 I e chlSab2.chr12 3688977 1629 - 108555830 I e macNem1.NW_012020287v1 40459 819 + 4899514 I a score=144.000000 s hg38.chr3_KI270784v1_alt 153815 1 + 184404 a s panTro5.chr3 47189 1 - 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chr3 42132 1 - 205426864 c i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60664 1 + 508821 C i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154765 1 - 123690457 c i nomLeu3.chr11 C 0 C 0 e aotNan1.NW_018507789v1 2492364 1574 + 12154212 I e cebCap1.NW_016107581v1 4399299 1633 + 4432243 I e calJac3.chr18 46456861 434 - 47448759 I e cerAty1.NW_012005170v1 40744 0 + 97742 C e saiBol1.JH378197 1744 1581 + 8899380 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e rheMac8.chrUn_NW_014858614v1 24757 0 - 85730 C e manLeu1.NW_012101680v1 39289 1832 + 85016 I e chlSab2.chr12 3688977 1629 - 108555830 I e macNem1.NW_012020287v1 40459 819 + 4899514 I e macFas5.chr6 45120 0 - 181584905 C a score=0.000000 s hg38.chr3_KI270784v1_alt 153816 319 + 184404 aatatatgaaatatatgtaatataccattaatatatgaaatatatgtaatacaccattaatatatgaaatatatgtaatacaccattaatatatgaaatatatgtaataCACCATTAATATATGAAGTATATGTAATACACCATTAATATATGAAGTATATGTAATACACCATTAACATATGAAATATATGTAATACACCATTAATATATGAAATATATGTAATACACCATTAATATATGAAGTATATGTAATACACCATTAATATATGAAATATATGTAATACACCATTAATATATGAAATATATGTAATACACCATT e aotNan1.NW_018507789v1 2492364 1574 + 12154212 I e cebCap1.NW_016107581v1 4399299 1633 + 4432243 I e calJac3.chr18 46456861 434 - 47448759 I e cerAty1.NW_012005170v1 40744 0 + 97742 C e saiBol1.JH378197 1744 1581 + 8899380 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e rheMac8.chrUn_NW_014858614v1 24757 0 - 85730 C e manLeu1.NW_012101680v1 39289 1832 + 85016 I e chlSab2.chr12 3688977 1629 - 108555830 I e macNem1.NW_012020287v1 40459 819 + 4899514 I e macFas5.chr6 45120 0 - 181584905 C e nomLeu3.chr11 154766 0 - 123690457 C e panPan2.chr3 42133 0 - 205426864 C e gorGor5.CYUI01015884v1 60665 0 + 508821 C e panTro5.chr3 47190 0 - 202621043 C a score=2593.000000 s hg38.chr3_KI270784v1_alt 154135 28 + 184404 AATATATGAAATATATGTAATACACCAT s gorGor5.CYUI01015884v1 60665 28 + 508821 AATATATGAAATATATGTAATACACCAT i gorGor5.CYUI01015884v1 C 0 C 0 e aotNan1.NW_018507789v1 2492364 1574 + 12154212 I e cebCap1.NW_016107581v1 4399299 1633 + 4432243 I e calJac3.chr18 46456861 434 - 47448759 I e cerAty1.NW_012005170v1 40744 0 + 97742 C e saiBol1.JH378197 1744 1581 + 8899380 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e rheMac8.chrUn_NW_014858614v1 24757 0 - 85730 C e manLeu1.NW_012101680v1 39289 1832 + 85016 I e chlSab2.chr12 3688977 1629 - 108555830 I e macNem1.NW_012020287v1 40459 819 + 4899514 I e macFas5.chr6 45120 0 - 181584905 C e nomLeu3.chr11 154766 0 - 123690457 C e panPan2.chr3 42133 0 - 205426864 C e panTro5.chr3 47190 0 - 202621043 C a score=1911.000000 s hg38.chr3_KI270784v1_alt 154163 1 + 184404 T s gorGor5.CYUI01015884v1 60693 1 + 508821 T i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 24757 1 - 85730 t i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 45120 1 - 181584905 t i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 41278 1 + 4899514 t i macNem1.NW_012020287v1 I 819 C 0 s cerAty1.NW_012005170v1 40744 1 + 97742 t i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 41121 1 + 85016 t i manLeu1.NW_012101680v1 I 1832 C 0 e aotNan1.NW_018507789v1 2492364 1574 + 12154212 I e cebCap1.NW_016107581v1 4399299 1633 + 4432243 I e calJac3.chr18 46456861 434 - 47448759 I e saiBol1.JH378197 1744 1581 + 8899380 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e chlSab2.chr12 3688977 1629 - 108555830 I e nomLeu3.chr11 154766 0 - 123690457 C e panPan2.chr3 42133 0 - 205426864 C e panTro5.chr3 47190 0 - 202621043 C a score=24570.000000 s hg38.chr3_KI270784v1_alt 154164 6 + 184404 AATATA s panTro5.chr3 47190 6 - 202621043 aatata i panTro5.chr3 C 0 C 0 s panPan2.chr3 42133 6 - 205426864 aatata i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60694 6 + 508821 AATATA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154766 6 - 123690457 aatata i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 24758 6 - 85730 aatata i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 45121 6 - 181584905 aatata i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 41279 6 + 4899514 aatata i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 40745 6 + 97742 aatata i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 41122 6 + 85016 aatata i manLeu1.NW_012101680v1 C 0 C 0 e aotNan1.NW_018507789v1 2492364 1574 + 12154212 I e cebCap1.NW_016107581v1 4399299 1633 + 4432243 I e calJac3.chr18 46456861 434 - 47448759 I e saiBol1.JH378197 1744 1581 + 8899380 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e chlSab2.chr12 3688977 1629 - 108555830 I a score=5005.000000 s hg38.chr3_KI270784v1_alt 154170 1 + 184404 T s panTro5.chr3 47196 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 42139 1 - 205426864 t i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60700 1 + 508821 T i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154772 1 - 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 24764 1 - 85730 t i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 45127 1 - 181584905 t i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 41285 1 + 4899514 t i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 40751 1 + 97742 t i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 41128 1 + 85016 t i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46457295 1 - 47448759 t i calJac3.chr18 I 434 C 0 e aotNan1.NW_018507789v1 2492364 1574 + 12154212 I e cebCap1.NW_016107581v1 4399299 1633 + 4432243 I e saiBol1.JH378197 1744 1581 + 8899380 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e chlSab2.chr12 3688977 1629 - 108555830 I a score=46670.000000 s hg38.chr3_KI270784v1_alt 154171 11 + 184404 GAAATATATGT s panTro5.chr3 47197 11 - 202621043 gaaatatatgt i panTro5.chr3 C 0 C 0 s panPan2.chr3 42140 11 - 205426864 gaaatatatgt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60701 11 + 508821 GAAATATATGT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154773 11 - 123690457 gaaatatatgt i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 24765 11 - 85730 gaaatatatgt i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 45128 11 - 181584905 gaaatatatgt i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 41286 11 + 4899514 gaaatatatgt i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 40752 11 + 97742 gaaatatatgt i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 41129 11 + 85016 gaaatatatgt i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46457296 8 - 47448759 gaggtata--- i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 3325 8 + 8899380 gaggtata--- i saiBol1.JH378197 I 1581 C 0 e aotNan1.NW_018507789v1 2492364 1574 + 12154212 I e cebCap1.NW_016107581v1 4399299 1633 + 4432243 I e colAng1.NW_012116822v1 1010595 1085 - 1267912 M e chlSab2.chr12 3688977 1629 - 108555830 I a score=418032.000000 s hg38.chr3_KI270784v1_alt 154182 67 + 184404 AATAcaccattacactccagcctgggcaacagagcaagaccctgtctcaaaaaaaaaaaaa---------CCaaca s panTro5.chr3 47208 72 - 202621043 aatacaccattacactccagcctgggaaacagagcaagaccctgtctcaaaaaaaaaaaaa----aaaaaCCaaca i panTro5.chr3 C 0 C 0 s panPan2.chr3 42151 76 - 205426864 aatacaccattacactccagcctgggaaacagagcaagaccctgtctcaaaaaaaaaaaaaaaaaaaaaaCCaaca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60712 66 + 508821 AATAcaccattacactccagcctgggcaacagagcaagaccctgtctcaaaaaaaaaaaa----------CCaaca i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154784 64 - 123690457 aatacaccattacactccagcctgggcaacagagcaagacccggtctcaaaaaaaaCaa------------caaca i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 24776 60 - 85730 aatacacgattacactccagcctgggcgacagagcaagactctgtctcaaaaaaa----------------CAACA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 45139 60 - 181584905 aatacacgattacactccagcctgggcgacagagcaagactctgtctcaaaaaaa----------------CAACA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 41297 60 + 4899514 aatacacgattacactccagcctgggcgacagagcaagactctgtctcaaaaaaa----------------CAACA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 40763 60 + 97742 aatacacgattacactccagcctgggcgacagagcaagactctgtctcaaaaaaa----------------CAACA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3690606 60 - 108555830 aatacaccattgcactccagcctgaacaacagggcaagaccctgtctcaacaaac----------------aaaaa i chlSab2.chr12 I 1629 C 0 s manLeu1.NW_012101680v1 41140 60 + 85016 aatacacgattacactccagcctgggcgacagagcaagactctgtctcaaaaaaa----------------CAACA i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46457304 59 - 47448759 aatacaccattgcactgcagcctgggcaacagagtgacagcctgtctcaaaaaa-----------------Caaca i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 3333 59 + 8899380 aatacaccattgcactgcagcctgggcaacagagtgggaccctttctcaaaaaa-----------------CTCAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4400932 59 + 4432243 aatacaccattgcactgcagccttggcaacaaagagagaccctgtctcaaaaaa-----------------Ctaaa i cebCap1.NW_016107581v1 I 1633 C 0 s aotNan1.NW_018507789v1 2493938 59 + 12154212 aatacaccattgcactgcagccttggcaacaaagagagaccctatctcaaaaaa-----------------Ctaaa i aotNan1.NW_018507789v1 I 1574 C 0 e colAng1.NW_012116822v1 1010595 1085 - 1267912 M a score=1106389.000000 s hg38.chr3_KI270784v1_alt 154249 121 + 184404 atctaac--------aattattgagttgttgcttgttctagaaatggttctaaatactttacatagattcccatttaagcatca-caatggtgtcctgtgaactagctgctattgtcatctttattttat s panTro5.chr3 47280 121 - 202621043 atctaac--------aattattgagttgttgcttgttctagaaatggttctaaatactttacatagattcccatttaagcatca-caatggtgtcctgtgaactagctgctattgtcatctttattttat i panTro5.chr3 C 0 C 0 s panPan2.chr3 42227 121 - 205426864 atctaac--------aattattgagttgttgcttgttctagaaatggttctaaatactttacatagattcccatttaagcatca-caatggtgtcctgtgaactagctgctattgtcatctttattttat i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60778 121 + 508821 atctaac--------aattattgagttgttgcttgttctagaaatggttctaaatactttacatagattcccatttaagcatca-caatggtgtcctgtgaactagctgctattgtcatctttattttat i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154848 121 - 123690457 atctaac--------aattattgagttgttgcttgttctagaaatggttctaaatactttacatagattcccatttaagcatca-caatggtgtcctgtgagctagctgctattatcatctttattttat i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 24836 129 - 85730 ATCTAACAATTATTGAGttgttgagttgttgcttgttctagaaatggtcctaaatactttacatagattcccatttaaacatca-caatggtgtcctgtgagctagctgctattgtcatctttattttat i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 45199 129 - 181584905 ATCTAACAATTATTGAGttgttgagttgttgcttgttctagaaatggtcctaaatactttacatagattcccatttaaacatca-caatggtgtcctgtgagctagctgctattgtcatctttattttat i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 41357 129 + 4899514 ATCTAACAATTATTGAGttgttgagttgttgcttgttctagaaatggtcctaaatactttacatagattcccatttaagcatca-caatggtgtcctgtgagctagctgctattgtcatctttattttat i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 40823 129 + 97742 ATCTAACAATTATTGAGttgttgagttgttgcttgttctagaaatggtcctaaatactttacatagattcccatttaagcatca-caatggtgtcctgtgagctagctgctattgtcatctttattttat i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3690666 121 - 108555830 aTctaac--------agttattgagttgttgcttgttctggaaatggttctaaatgctttacatagattttcatttaagcatca-taatggtgtcctgtgagctagctactattgtcatctttattttat i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 41200 129 + 85016 ATCTAACAATTATTGAGttgttgagttgttgcttgttctagaaatggtcctaaatactttacatagattcccatttaagcatca-caatggtgtcctgtgagctagctgctattgtcatctttattttat i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46457363 116 - 47448759 atctaac--------acttactgagttgttgcttgttctagaaacagttctaaa-----tacataggttctcatttaagcatca-cagtggtgtcctatgtgctaactgctcttgtcatccttattttat i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 3392 121 + 8899380 ATctaac--------aattactcagttgttgcttgttctaaaaacagttctaaatagtttacataggttcacatttaagcatcg-caatggtgtcctgtgagctagctgctattgtcatctttattttat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4400991 121 + 4432243 atctaac--------aattattgagtttttggttgttctaggaacagttctaaatagtttgtatagattcttatttaagtatca-caatggtgtcctgcaagctagctgctattgtcatctttattttat i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2493997 121 + 12154212 atctaac--------aattattgagtttttggttgttctgggaacagttctaaatagtttgtatagattcttatttaagcatca-caatggtgtcctgcaagctagctgctattgtcatctttcttttat i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19616851 122 - 27850971 atttaac--------aattactcaactgttttttgtgctaagaactgttttaaatactttgcaaagattctcattaaaacatcagtaatgatgttctgtgggaccactactatttttgtcttcattttgt i otoGar3.GL873538 N 0 C 0 e colAng1.NW_012116822v1 1010595 1085 - 1267912 M a score=33477.000000 s hg38.chr3_KI270784v1_alt 154370 3 + 184404 taa s panTro5.chr3 47401 3 - 202621043 taa i panTro5.chr3 C 0 C 0 s panPan2.chr3 42348 3 - 205426864 taa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60899 3 + 508821 taa i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154969 3 - 123690457 taa i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 24965 3 - 85730 taa i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 45328 3 - 181584905 taa i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 41486 3 + 4899514 taa i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 40952 3 + 97742 taa i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3690787 3 - 108555830 taa i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 41329 3 + 85016 taa i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46457479 3 - 47448759 taa i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 3513 3 + 8899380 taa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4401112 3 + 4432243 taa i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2494118 3 + 12154212 taa i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19616973 3 - 27850971 tga i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1683836 3 - 2296528 Tga i dasNov3.JH570393 N 0 C 0 e colAng1.NW_012116822v1 1010595 1085 - 1267912 M a score=676174.000000 s hg38.chr3_KI270784v1_alt 154373 63 + 184404 tgaggaaaatgaggcacagaaaggctaagcaatacctggtacgtggctgagttcaaagt---agaa s panTro5.chr3 47404 63 - 202621043 tgaggaaaatgaggcacagaaaggctaagcaatgcctggtacgtgactgagttcaaagt---agaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 42351 63 - 205426864 tgaggaaaatgaggcacagaaaggctaagcaatgcctggtacgtgactgagttcaaagt---agaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60902 63 + 508821 tgaggaaaatgaggcacagaaaggctaagcaatacctggtacgtgactgagttcaaagt---agaa i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 154972 63 - 123690457 tgaggaaaatgaggcacagaaaggctaagcaatacctggtacgtcactgagttcaaagt---agaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 24968 63 - 85730 tgaggaaaatgaagcacagaaaggctaagcaatagctggtaagtgaccgagttccaagt---agaa i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 45331 63 - 181584905 tgaggaaaatgaagcacagaaaggctaagcaatagctggtaagtgaccgagttccaagt---agaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 41489 63 + 4899514 tgaggaaaatgaagcacagaaaggctaagcaatagctggtaagtgaccaagttccaagt---agaa i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 40955 63 + 97742 tgaggaaaatgaagcacagaaaggctaagcaatagctggtaagtgaccgagttccaagt---agaa i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3690790 63 - 108555830 tgtgaaaattgaggcacagaaaggttaagcaatagctggtatgtgactgagttcaaagt---agaa i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 41332 63 + 85016 tgaggaaaatgaagcacagaaaggctaagcaatagctggtaagtgaccgagttccaagt---agaa i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1011680 63 - 1267912 tgaggaaaatgaagcacagaaaggctaagcaatagctggtaagtgactgagttccaagt---agaa i colAng1.NW_012116822v1 M 1085 C 0 s calJac3.chr18 46457482 66 - 47448759 tgaggaaattgaggtacagaaaggctaagcagtagctggtcagtgacagcgttcaaagtagaagaa i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 3516 63 + 8899380 tgaggaaactgaggcacggaaagcctaagtaatagctggtaagtgacagagctcaaagt---agaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4401115 63 + 4432243 tgaggaaattgaggcacagaaagtctaagcaatagctggtaagtgacagagttcagaat---agaa i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2494121 63 + 12154212 tgaggaaattgaggcacagaaagtctaagcaatagctggtaagtggtagagttcagagt---agaa i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19616976 63 - 27850971 tgaggaacttgaggcacagaaaggctgagcaatagctagtaagtgacaaagcttaaaat---agga i otoGar3.GL873538 C 0 I 186 s dasNov3.JH570393 1683839 60 - 2296528 tgagaaaatggaggcacagaaagtc-aagtgttaa-tattaagtcacagagttaaaaga---gga- i dasNov3.JH570393 C 0 C 0 a score=123739.000000 s hg38.chr3_KI270784v1_alt 154436 12 + 184404 ctcaagccccag s panTro5.chr3 47467 12 - 202621043 ctcaagccccag i panTro5.chr3 C 0 C 0 s panPan2.chr3 42414 12 - 205426864 ctcaagccccag i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60965 12 + 508821 ctcaagccccgg i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 155035 12 - 123690457 ctcaagctccag i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 25031 12 - 85730 ctcaagccatag i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 45394 12 - 181584905 ctcaagccatag i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 41552 12 + 4899514 ctcaagccgtag i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 41018 12 + 97742 ctcaagctgtag i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3690853 12 - 108555830 ctcaagccctag i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 41395 12 + 85016 ctcaagccgtag i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1011743 12 - 1267912 ctcaagccgtag i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46457548 12 - 47448759 ctcaagccctcg i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 3579 12 + 8899380 ctcaagccctag i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4401178 12 + 4432243 ctcaagccctag i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2494184 12 + 12154212 ttcaggccctag i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19617225 12 - 27850971 cttaagcccaag i otoGar3.GL873538 I 186 I 104 s dasNov3.JH570393 1683899 12 - 2296528 ttcaaatccaag i dasNov3.JH570393 C 0 C 0 a score=915199.000000 s hg38.chr3_KI270784v1_alt 154448 83 + 184404 ctgaactgaatccaaacaccaagctcattctgtccaaataggctgcTGT-TTCA-TTAAGGGAGTGAGCAG-TAAGAGCTAATAAA s panTro5.chr3 47479 83 - 202621043 ctgaactgaatccaaacaccaagctcattctgtccaaataggctgcTGT-TTCA-TTAAGGGAGTGAGCAG-TAAGAGCTAATAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 42426 83 - 205426864 ctgaactgaatccaaacaccaagctcattctgtccaaataggctgcTGT-TTCA-TTAAGGGAGTGAGCAG-TAAGAGCTAATAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 60977 83 + 508821 ctgaactgaatccaaaCAACAAGCTCATTCTGTCCAAATAGGCTGCTAT-TTCA-TTAAGGGGGTGAGCAG-TAAGAGCTAATAAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 155047 83 - 123690457 ctgaactgaatccaaacaccaagctcattcTGTCCAAATAGGCTGCTGT-TTCA-TTAAGGGAGTGAGCAG-TAAGAGCTAATAAA i nomLeu3.chr11 C 0 I 309 s rheMac8.chrUn_NW_014858614v1 25043 83 - 85730 ttgaactgaatccaaacaccaagctcATTCTATCCAAATAGGCTGCTGT-TTCA-TTAAGGTAGTGAGCAA-TAAGAGCTAATAAA i rheMac8.chrUn_NW_014858614v1 C 0 I 3 s macFas5.chr6 45406 83 - 181584905 ttgaactgaatccaaacaccaagctcATTCTATCCAAATAGGCTGCTGT-TTCA-TTAAGGTAGTGAGCAA-TAAGAGCTAATAAA i macFas5.chr6 C 0 I 3 s macNem1.NW_012020287v1 41564 83 + 4899514 ttgaactgaatccaaacaccaagctcATTCTATCCAAATAGGCTGCTGT-TTCA-TTAAGGTAGTGAGCAA-TAAGAGCTAATAAA i macNem1.NW_012020287v1 C 0 I 3 s cerAty1.NW_012005170v1 41030 83 + 97742 ttgaactgaatccaaacaccaagctcATTCTATCCAAATAGGCTGCTGT-TTCA-TTAAGGTAGTGAGCAA-TAAGAGCTAATAAA i cerAty1.NW_012005170v1 C 0 I 3 s chlSab2.chr12 3690865 84 - 108555830 ttgaactgaatccaagcaccaagctcattctaTCCAGATAGGCTGCTGT-TCCA-TTAAGGTAGGGAGCAGTTAAGAGCTAATAAA i chlSab2.chr12 C 0 I 3 s manLeu1.NW_012101680v1 41407 83 + 85016 ttgaactgaatccaaacaccaagctcattctaTCCAAATAGGCTGCTGT-TTCA-TTAAGGTAGTGAGCAA-TAAGAGCTAATAAA i manLeu1.NW_012101680v1 C 0 I 3 s colAng1.NW_012116822v1 1011755 83 - 1267912 ttgaactgaatccaaacaccaagctcattctatccaaataggctgcTGT-TTCG-TTAAGGTAGTGAGCAA-TAAGAGCTAATAAA i colAng1.NW_012116822v1 C 0 I 3 s calJac3.chr18 46457560 83 - 47448759 ttgaactgaattcatagaccaagctcattctatccaaataggctgccGT-TTCA-TTAAGGTAGTGAGCAA-TGAGAGCTAAGAAG i calJac3.chr18 C 0 I 3 s saiBol1.JH378197 3591 84 + 8899380 ttgaacggaatccaaagaccaagctcATTCTATCCAAATAGGCTGCTGTCTTCA-TTAAGGTAGTGAGCAG-TAAGAGCTAATAAA i saiBol1.JH378197 C 0 I 3 s cebCap1.NW_016107581v1 4401190 84 + 4432243 ttgaagtgaatccaaagaccaagctTATTCTCTCCAAATAGGCTGCCGTTTTCA-TTAAGGTAGTGAGCAG-TAAGAGCTAATAAA i cebCap1.NW_016107581v1 C 0 I 3 s aotNan1.NW_018507789v1 2494196 84 + 12154212 ttgaactgaatccaaagaccaagctcattctatccaaataggctgcTGTTTTCA-TTAAGGTAGTGAGCAG-TAAGAGCTAATAAA i aotNan1.NW_018507789v1 C 0 I 3 s otoGar3.GL873538 19617341 79 - 27850971 ttgaactgagtccaaaggctaagctctttcTGTTAACATAGCCTAGTCT-TTTA-CTAATGTGGT----AA-TAACAGCTAAAAAG i otoGar3.GL873538 I 104 I 3 s dasNov3.JH570393 1683911 62 - 2296528 ttgggctgaatctagagatc----------------------ctgctct-ttcATTTTATGTAGTGAGTAA-TAAGGGCTAATAAA i dasNov3.JH570393 C 0 C 0 a score=1618019.000000 s hg38.chr3_KI270784v1_alt 154531 156 + 184404 ---TGTACTTTCTTCAAAAGAAAAT----TATTTGTTTTGAAGGCAGAGGAA--------------TGCTCTTCAATGTTTACAATGACATGAACCATTGTAGGTTTTGAGATACTGCACTACAATTTCCTGAAAACCCCTCTCACTCTCCTAGGACTGTTCTACATTTGGCCTGTG s panTro5.chr3 47562 156 - 202621043 ---TGTACTTTCTTCAAAAGAAAAT----TATTTGTTTTGAAGGCAGAGGAA--------------TGCTCTTCAATGTTTACAATTACATGAACCATTGTAGGTTTTGAGATACTGCACTACAATTTCCTGAAAACTCCTCTCACTCTCCTAGGCCTGTTCTACATTTGGCCTCTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 42509 156 - 205426864 ---TGTACTTTCTTCAAAAGAAAAT----TATTTGTTTTGAAGGCAGAGGAA--------------TGCTCTTCAATGTTTACAATTACATGAACCATTGTAGGTTTTGAGATACTGCACTACAATTTCCTGAAAACTCCTCTCACTCTCCTAGGCCTGTTCTACATTTGGCCTCTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 61060 156 + 508821 ---TGTACTTTCTTCAAAAGAAAAT----TATTTGTTTTGAAGGCAGAGGAA--------------TGCTCTTCAATGTTTACAATTACATGAACTATTGTAGGTTTTGAGATACTGCACTACAATTTCCTGAAAACTCCTCTCGCTCTCCTAGGACTGTTCTACATTTGGCCTGTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 155439 156 - 123690457 ---TGTAATTTCTTCAAAAGAAAAT----TATTTGTTTTGAAGGCAGACGAA--------------TGCTCTTCAATGTTTACAATTACATGAACCATTATAGGTTTTGAGAGACTGCACTACAATTTCCTGAAAACTCCTCTCGCTCTCCTAGGACTGCTCTACATTTGGCCTGTG i nomLeu3.chr11 I 309 C 0 s rheMac8.chrUn_NW_014858614v1 25129 160 - 85730 ---TGTACTTTCTTCAAAAGAAAAT----TATTTGTTTTGAAGGCAGAGGAATAA---------CATGCTCTTCTATGTTTGCAGTTACATAAAGCAGTGTAGGTTTTGAGATATTGC-TTATAATTTCCTGAAAACTCCTCTCGCTCTCATAGGACTGCTCTACATTTGGCCTGTG i rheMac8.chrUn_NW_014858614v1 I 3 C 0 s macFas5.chr6 45492 160 - 181584905 ---TGTACTTTCTTCAAAAGAAAAT----TATTTGTTTTGAAGGCAGAGGAATAA---------CATGCTCTTCTATGTTTGCAGTTACATAAAGCAGTGTAGGTTTTGAGATATTGC-TTATAATTTCCTGAAAACTCCTCTCGCTCTCATAGGACTGCTCTACATTTGGCCTGTG i macFas5.chr6 I 3 C 0 s macNem1.NW_012020287v1 41650 160 + 4899514 ---TGTACTTTCTTCAAAAGAAAAT----TATTTGTTTTGAAGGCAGAGGAATAA---------CATGCTCTTCTATGTTTGCAGTTACATAAACCAGTGTAGGTTTTGAGATATTGC-TTATAATTTCCTGAAAACTCCTCTCGCTCTCATAGGACTGCTCTACATTTGGCCTGTG i macNem1.NW_012020287v1 I 3 M 1138 s cerAty1.NW_012005170v1 41116 160 + 97742 ---TGTGCTTTCTTCAAAAGAAAAT----TATTTGTTTTGAAGGCAGAGGAATAA---------CATGCTCTTCTATGTTTGCAGTTACATAAACCAGTGTAGGTTTTGAGATATTGC-TTATAATTTCCTGAAAACTCCTCTCGCTCTCATAGGACTGCTCTACATTTGGCCTGTG i cerAty1.NW_012005170v1 I 3 C 0 s chlSab2.chr12 3690952 161 - 108555830 ---GGTACTTTCTTCAAAAGAAAAT----TATTTGTTTTGAAGGCAGAGGAATAA---------CATGCTGTTCAATGTTTGCACTTACATAAACCAGTGTAGGTTTTGAGATATTGCACTACGATTTCCTGAAATCTCCTCTCACTCTCCTAGGACTGTTCTACATTTGGCCTGTG i chlSab2.chr12 I 3 C 0 s manLeu1.NW_012101680v1 41493 160 + 85016 ---TGTGCTTTCTTCAAAAGAAAAT----TATTTGTTTTGAAGGCAGAGGAATAA---------CATGCTCTTCTATGTTTGCAGTTACATAAACCAGTGTAGGTTTTGAGATATTGC-TTATAATTTCCTGAAAACTCCTCTCGCTCTCATAGGAGTGCTCTACATTTGGCCTGTG i manLeu1.NW_012101680v1 I 3 C 0 s colAng1.NW_012116822v1 1011841 156 - 1267912 ---TGTACTTTCTTCAAAAGAAAAT----TACTTGTTTTGAAGACAGAGGAATAA---------CGTGCTCTTCAATGTTTGCAGTTACATAAACCAGTGTAGGTTTTGAGATCTTGC-AC-TCGTTTCCTGAAAA---CTCTCACTCTCCTAGGACTGCTCTACATTTGGCCTGTG i colAng1.NW_012116822v1 I 3 C 0 s calJac3.chr18 46457646 161 - 47448759 ---CGTACTTTCTTCAAAAGGAACT----TATTTGTTTTGAAGGCAGAGGAATAA---------CATGCTATTCAGTGTTTACAATCTCATGAATCATTGTAGGTGTTGAGATACTGCACTACAATTTCCTGAAAACTACTCTCACTCTCACAGGACCCCTCTGCATTTGGCCTGTG i calJac3.chr18 I 3 C 0 s saiBol1.JH378197 3678 161 + 8899380 ---TGTACTTTCTTCCAAAAAAAAT----TATTTGTTTTGAAGGCAGAGGAATAA---------CATGCTATTCAATGTTTACAATGACATGAACCATTGTAGGTCTTGGGATATGGCATTGCAATTTCCTGAAAACTCCTCTTACTCTCACAGGACTGCTCTGCATTTGGCCTGTG i saiBol1.JH378197 I 3 C 0 s cebCap1.NW_016107581v1 4401277 158 + 4432243 ---TGTACTTTCTTCCAAAAAAA-------AATTGTTTTGAAGGCAGAGAAATAA---------CATGCTATTCAATGTTTACAATGACATGAATCATTATAGGCTTTGAGATACAGCATTACAATTTCCTGAAAACTCCTCTCACTTTCATAGGGCTGCTCTACATTTGGCCTGTG i cebCap1.NW_016107581v1 I 3 C 0 s aotNan1.NW_018507789v1 2494283 158 + 12154212 ---T---CTTTCTTCAAAAGAAAAT----TACTTATTTTGAAGACAGAAGAATAA---------CATGCTATTCAATGGTTACAATGACATCAATCATTATAAGTTTTGAGATACTGCATTACAATTTCCTGAAAACTCCTCTCACTTTCATAGGGTTGCTCTACATTTGACCTGTG i aotNan1.NW_018507789v1 I 3 C 0 s otoGar3.GL873538 19617423 164 - 27850971 ---TTTACTTTCTTTAGATGAAAATTAAATATTTGTTTTGAAAGCAGAAGAAT-A---------CACGCTACTTGATGTTTACAATTACATAAATAACCATATGTTATGAGGTAGCACACTACAATTTCCTAATGTATCCTTTCTCTTTCATAGGACTGCTCTGCATTTGGCCTGTG i otoGar3.GL873538 I 3 C 0 s dasNov3.JH570393 1683973 175 - 2296528 TATTTAACTTTCTTCACAAGAAAATCAAGGATTTGCTTTGTAGACATAGGAATAACATGCTATTCATGCTATTTAATGTTTACAGTTAAACTAATAATTGTATGTCTTGAGATAATGA-GTATAATTTCCTAAAAAGTCCTCTCACTTT-ATAGGACTGCTCTGCATCTGGCCTGTG i dasNov3.JH570393 C 0 C 0 a score=1698579.000000 s hg38.chr3_KI270784v1_alt 154687 190 + 184404 CCCACGGCCGTGTGCAAGTGGTCACTCTCTTGCTGAGCAGAAAATGTCAGATCGACATCTGTGACAGACTAAACAGGACGCCTTTAATGAAGGTATACAGCAGCCAACTCTCTCAGCACGAAAAAGATTTCA-CTAAATACATAGAATTAAAATGAATGTATCTCATTTAAATATA--ACTAGTTGGTGAAAC s panTro5.chr3 47718 190 - 202621043 CCCATGGCCGTGTAGAAGTGGTCACTCTCTTGCTGAGCAGAAAATGCCAGATCGACATCTGTGACAGACTAAACAGGATGCCTTTAATGAAGGTATACAGTAGCCAACTCTCTCAGCACGAAAAAGATTTCA-CTAAATACATAGAATTAAAATGAATTTATCTCATTTAAATATA--ACTAGTTGGTGAAAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 42665 190 - 205426864 CCTATGGCCGTGTAGAAGTGGTCACTCTCTTGCTGAGCAGAAAATGCCAGATCGACATCTGTGACAGACTAAACAGGATGCCTTTAATGAAGGTATACAGTAGCCAACTCTCTCAGCATGAAAAAGATTTCA-CTAAATACATAGAATTAAAATGAATTTATCTCATTTAAATATA--ACTAGTTGGTGAAAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 61216 190 + 508821 CCCATGGCCGTGTGGAAGTGGTCACTCTCTTGCTGAGCAGAAAATGCCAGATCGACATCTGTGACAGACTAAACAGGATGCCTTTAATGAAGGTATACAGTAGCCAACTCTCTCAGCACGAAAAGGATTTCA-CTAAATACATAGAATTAAAATGAATTTATCTCATTTAAATATA--ACTAGTTGGTGAAAC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 155595 188 - 123690457 CCCATGGCCATGTGGAAGCGGTCA--CTCTTGCTGAGCAAAAAATGCCAGATCGACATCTGTGACAGACTAAGCAGGGTGCCTTTAATGAAGGTATACAGTAGCCAGCTCTTCTGGCATGAAATAGATGTCA-CTAAATACATAGAATTAAAATGAATTTATCTCGTTTAAATAGA--ACTAGTTGGTGAAAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 25289 192 - 85730 CGCATGGCTGTGTGGAAGTGCTCACTCTCTTGCTGAGCAGAAAATGCCAGATTGACATCTGTGACAGACTGAACAGGACACCTTTAATGAAGGTGTATGGTAGCCAACTCTTTTGGCATGACATAGATTTCA-CTAAATACATAGAATTAAAATGAATTTATCTCATTTAAATATAACACAGGTTGGTGAAAC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 45652 192 - 181584905 CGCATGGCTGTGTGGAAGTGCTCACTCTCTTGCTGAGCAGAAAATGCCAGATTGACATCTGTGACAGACTGAACAGGACACCTTTAATGAAGGTGTATGGTAGCCAACTCTTTTGGCATGACATAGATTTCA-CTAAATACATAGAATTAAAATGAATTTATCTCATTTAAATATAACACAGGTTGGTGAAAC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 41276 190 + 97742 CGCATGGCTGTGTGGAAGTGCTCACTCTCTTGCTGAGCAGAAAATGCCAGATTGACATCTGTGACAGACTGAACAGGATGCCTTTAATGAAGGTGTATAGTAGCCAACTCTTTTGGCATGACATAGATTTCA-CTAAATACATAGAATTAAAATGAATTTATCTCATTTAAATATA--ACAGGTTGGTGAAAT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3691113 191 - 108555830 CCCATGGCCATGTGGAAGTGGTCACTCTCTTGCTGAGCAGAAGTTGCCAGATCGACATCTGTGACAGACTAAACAGGACACCGTTAATGAAGGTATATAGTAGTCAACTCTTTCAGCATGAAATGGATTTGATTTAAATACATAGAGTTAAAATGAATTTATCTCATTTAAATATA--ACTAGTTGGTGAAAC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 41653 190 + 85016 CGCATGGCTGTGTGGAAGTGCTCACTCTCTTGCTGAGCAGAAAATGCCAGATTGACATCTGTGACAGACTGAACAGGATGCCTTTAATGAAGGTGTATAGTAGCCAACTCTTTTGGCATGACATAGATTTCA-CTAAATACATAGAATTAAAATGAATTTATCTCATTTAAATATA--ACAGGTTGGTGAAAT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1011997 190 - 1267912 CGCATGGCTGTGTGGAAGTGCTTACTCTCTTACTGAGCAGAAAATGCCAGATTGACATCTGTGACAGACTAAACGGGACGCCTTTCATGAAGGTGTATAGTAGCCAAGTCTTTTGGCATGAAATAGATTTCA-CTAAATACGTAGAATTAAAACGAATTTATCTCATTTAAATATA--ACAGGTTGGTGAAAC i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46457807 191 - 47448759 CATATGGCCATGTGGCAGTGGTCACTCTGTTGGTGAGCAGAAAGTGCCAGATTGACATCGATGACGGACTAAACAGGACCCCGTTAATGAAGGTATATAGTAGTCAACTCTTTCAGCATGGAATGGATTTGATTTAAATACATGTAAATAAAATGAATTTATCTCATGTAAATATG--ACTAGTTGGTGAAAC i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 3839 191 + 8899380 CTTATGGCCATGTGGAAGTTGTCAGTCTGTTAGTGAGCAGACAATGCCAGATTGACATCGGTGACAGACTTAACAGGACACCTTTAATGAAGGTATGTAGTAGACAACTCTTTCAGCATAAAATGGATTTGATTTAAATACATAGAAATAAAATGAATTTATCACATTTAAATATA--ACTAGTTGGTAAAAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4401435 186 + 4432243 TCCATGGCCATGTGGAAGTGGTAGGTCTCTTAATGAGCAGAAAATGCCAAATTGACATCAGTGACAGACTAAACAGGACACCTTTAATGAAGGTGTATAGTAGCTAACTCTTTCAACATGAAATGGATTTGATTTAAATACATAG-----AAATGAATTTATCTAATTTAAATATA--ACTAGTTGGTGAAAC i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2494441 184 + 12154212 TCCATGGCCATGTGGAAGTGGTCAGTCTCTTAGTGAGCAGAAAATGCCAGATTGACATCGGTGACAGACTAAACAGGA--CCTTTAATAAAGGTGTATAGTAGCCAACTCTTTCAACATGAAATGGATTTGATTTAAATACATAG-----AAATAAATTTATCTCATTTAAATATA--ACTAGTTGGTGGAAC i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19617587 171 - 27850971 CCAGTGGCCATTCAGAGGTGGTGACTCTCTTGGTGGACAGAAAATGCCAGCTTAACATGTGTGACAGTGAGAACAGGACAGCTCTGATGAAGGTATATGG--------------------AGATGGATTTGATTTAAATACATAGAATAAAAATGAATTTATCTCCTTTAAATATA--ACTAGATGGTGAAAT i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1684148 179 - 2296528 CCAATGGCCATACAGAAGTGGTAACTCTCCTGGTAGAGAGAAAATGCCAGATTAACCTGTGTGACAGTGAAAACAGGACAGCTCTGATTAAGGTATGCA-TGGCCAACTATTTCAACATTAGATGCATTTGACTTAAATTCTTAGGATAAAACCAAATTC-----------ATATA--CGTAACTGGTGAAAC i dasNov3.JH570393 C 0 I 823 e macNem1.NW_012020287v1 41810 1138 + 4899514 M a score=501832.000000 s hg38.chr3_KI270784v1_alt 154877 52 + 184404 CTGTGGAATATGTATTTTGAATTCTTAGAATTTATAGTCT--AAGTTTTCATCT s panTro5.chr3 47908 52 - 202621043 CTGTGGAATATGTATTTTGAATTCTTAGAATTTATAGTCT--AAGTTTTCATCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 42855 52 - 205426864 CTGTGGAATATGTATTTTGAATTCTTAGAATTTATAGTCT--AAGTTTTCATCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 61406 52 + 508821 CTGTGGAATACGTATTTTGAATTCTTAGAATTTATAGTCT--AAGTTTTCATCT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 155783 52 - 123690457 CTGTGGAATATGTATTTTGAATTCTTAGAATTTATAGTCT--AAGTTTTCTCCT i nomLeu3.chr11 C 0 I 49227 s rheMac8.chrUn_NW_014858614v1 25481 52 - 85730 CTGTGGAATATGTATTTTGAATTCTTAGAATTTATAGTCT--AATTTTTCATCT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 45844 52 - 181584905 CTGTGGAATATGTATTTTGAATTCTTAGAATTTATAGTCT--AATTTTTCATCT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 41466 52 + 97742 CTGTGGAATATGTATTTTGAATTCTTAGAATTTATAGTCT--AATTTTTCATCT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3691304 52 - 108555830 CTGTGGAATATGTATTTGGAATTCTTAGAATTTATAGTCT--AATTTTTTATCT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 41843 52 + 85016 CTGTGGAATATGTATTTTGAATTCTTAGAATTTATAGTCT--AATTTTTCATCT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1012187 52 - 1267912 CTGTGGAATATGTATTTTGAATTCTTAGAATTTATAGTCT--GATTTTTCACCT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46457998 54 - 47448759 TTGTGGAATATGTGTATTGAATTCTTAGAAATTACAGTCTAATTTTTTTTATCT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 4030 52 + 8899380 CTGTGGAATATGTATTTTGAATTCTTAGAATTTACAGTCT--TGTTTTTTATTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4401621 52 + 4432243 CTGTGGAATATGTATTTTGAATGCTTAGAATTTACAGTCT--AATTTTTTTACT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2494625 52 + 12154212 CTGTGGAATATGTATTGTGAATGCTTAGAATTTACAGTCT--AATTTTTTATCT i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19617758 52 - 27850971 TTTTGGAATGTTTATTTTGAATTCCTAGAATTTACCATCT--ATTTCTTGGTTC i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1685150 52 - 2296528 CCATGAAATGTTTACTTTTAATTTCTAGAATTTTTGGTCT--CTTTCTCCTTCT i dasNov3.JH570393 I 823 C 0 e macNem1.NW_012020287v1 41810 1138 + 4899514 M a score=611940.000000 s hg38.chr3_KI270784v1_alt 154929 73 + 184404 AACACTGACAGGCTGTATATTGCCAGGAAGAGACGTGTTCCATTATTCTGCTGGAACATGGCACCAGTCCAAA s panTro5.chr3 47960 73 - 202621043 AACACTGATAGGCTGTATATTGCCAGGAAGAGACGTGTTCCATTATTCTGCTGGAACATGGCACCAATCCAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 42907 73 - 205426864 AACACTGATAGGCTGTATATTGCCAGGAAGAGACGTGTTCCATTATTCTGCTGGAACATGGCACCAATCCAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 61458 72 + 508821 AACA-TGATAGGCTGTATATTGCCAGGAAGAGACGTGTTCCATTATTCTGCTGGAACATGGCACCAATCCAAA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 25533 73 - 85730 AACACTGATAGGCTGCACATTGCCAGAAAGAGACGTGTTCCATTATTCTGCTGGAACATGGTGCCAATCTAAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 45896 73 - 181584905 AACACTGATAGGCTGCACATTGCCAGAAAGAGACGTGTTCCATTATTCTGCTGGAACATGGTGCCAATCTAAA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 41518 73 + 97742 AACACTGATAGGCTGTACATTGCCAGGAAGAGACGTGTTCCATTATTCTGCTGGAACATGGTGCCAATCTAAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3691356 73 - 108555830 AACACGAATAGGCTGTACATTGCCAGGAAGAGGCTTGTGCAATTATTCTCCTGGAACATGGCGCCAATCCAAA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 41895 73 + 85016 AACCCTGATAGGCTGTACATTGCCAGGAAGAGACGTGTTCCATTATTCTGCTGGAACATGGTGCCAATCTAAA i manLeu1.NW_012101680v1 C 0 I 41 s colAng1.NW_012116822v1 1012239 73 - 1267912 AACACTGATAGGCTGTACATTGCCAGGAAGAGACTTATTCCATGATTCTGCTGGAACATGGTGCCAATCTAAA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46458052 73 - 47448759 AACACGGATAGGCTGTACATGGTCAGAAGGAGGCTTGTTCCATTATTCTGCTGGAACATGGCGCCAATCCAAA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 4082 73 + 8899380 AACACTGATAGGCTGTACACGGCCAGGAGGAGAATTGTTCCATTTCTCTGCTGAAACACGGTGCCAATCCAAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4401673 73 + 4432243 AATACCAATAGGCTGCACATTGCCAGGAAGACACTTGTTCCATATTTCTGCTGGAACATGGAGCCAAACGAAA i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2494677 73 + 12154212 AATACTGATAGGCTGTACATTGCCAGGAAGAGACTTGTTCCATATTTCTGCTGGAACATGGAGCCAATCGAAA i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19617810 73 - 27850971 AATACCAACAGGCCGTACAATGCCAGGAAGAAGAATGTGCGACTATTCTGCTAGAACATGGTGCGGATCCAAA i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1685202 70 - 2296528 GATACTGATAGGCTGTACAATGCCAGGATGAGGAATGTGCAACTATTCTGCTAGAACATGGTGCTGACCC--- i dasNov3.JH570393 C 0 C 0 e macNem1.NW_012020287v1 41810 1138 + 4899514 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=456511.000000 s hg38.chr3_KI270784v1_alt 155002 81 + 184404 CATTAAGGACGTCTACAGCAACACTGCTCTTCATGATGGTAAACATTGAGGATGTCTACGGCAACACTGCTCTTCATGATG s panTro5.chr3 48033 81 - 202621043 CATTAAGGACGTCTACAGCAACACTGCTCTTCATGATGGTAAACATTGAGGATGTCTACGGCAACACTGCTCTTCATGATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 42980 81 - 205426864 CATTAAGGACGTCTACAGCAACACTGCTCTTCATGATGGTAAACATTGAGGATGTCTACGGCAACACTGCTCTTCATGATG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 61530 81 + 508821 CATTAAGGATGTCTACAGCAACATTGCTCTTCATGGTGGTAAACATTGAGGATGTCTACGGCAACACTGCTCTTCATGATG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 25606 81 - 85730 CATTAAGGATGTCTACGGCAACACTGCTCTTCATGATATTAATCATTAAGGATGTCTACGGCAACACTGCTCTTCATGATG i rheMac8.chrUn_NW_014858614v1 C 0 I 774 s macFas5.chr6 45969 81 - 181584905 CATTAAGGATGTCTACGGCAACACTACTCTTCATGATATTAATCATTAAGGATGTCTACGGCAACACTGCTCTTCATGATG i macFas5.chr6 C 0 I 729 s macNem1.NW_012020287v1 42948 81 + 4899514 CATTAAGGATGTCTACGGCAACACTGCTCTTCATGATGTTAAACATTAAGGATGTCTACGACAACACTGTTCTTCATGATG i macNem1.NW_012020287v1 M 1138 I 1 s cerAty1.NW_012005170v1 41591 81 + 97742 CATTAAGGATGTCTATGGCAACACTGTTCTTCATGATGTTAAACATTAAGGATGTCTACGGCAACACTGCTCTTCATGATA i cerAty1.NW_012005170v1 C 0 I 14 s chlSab2.chr12 3691429 38 - 108555830 -------------------------------------------CATTAAGGATATCTACGGCAACACTGCTCTCCATTATG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 42009 81 + 85016 CATTAAGGATGTCTACGGCAACACTGCTCTTCATGATATTAATCATTAAGGATGTCTACGGCAACACTGTTCTTCATGATG i manLeu1.NW_012101680v1 I 41 C 0 s colAng1.NW_012116822v1 1012312 81 - 1267912 CATTAAGGATGTCTATGGCAACACTGTTCTTCATGATGTTAAACATTAAGGATGTCTACGGCAACACTGCTCTTCATGATG i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46458125 38 - 47448759 -------------------------------------------CATTCAAGATGTCTACGGCAACACTGCTCTTCATTATG i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 4155 38 + 8899380 -------------------------------------------CATTCAAGATGTCTACGGCAACACTGCCCTTCATTATG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4401746 38 + 4432243 -------------------------------------------CATTCAAGATGTGTACGGCAACACTGTTCTTCATTATG i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2494750 38 + 12154212 -------------------------------------------CATTCAAGATGTGTACGGCAACACTGCTCTTCATTATG i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19617883 38 - 27850971 -------------------------------------------TCTTACAGATGTCCATGGCAACACTGCTCTGCACTATG i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1685272 41 - 2296528 ----------------------------------------AAATCTTGCAGACGTCAGTGGGAACACTGCTCTTCACTATG i dasNov3.JH570393 C 0 C 0 e nomLeu3.chr11 155835 49227 - 123690457 I a score=5232.000000 s hg38.chr3_KI270784v1_alt 155083 1 + 184404 C s panTro5.chr3 48114 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chr3 43061 1 - 205426864 C i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 61611 1 + 508821 C i gorGor5.CYUI01015884v1 C 0 C 0 s chlSab2.chr12 3691467 1 - 108555830 C i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 42090 1 + 85016 A i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1012393 1 - 1267912 C i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46458163 1 - 47448759 C i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 4193 1 + 8899380 C i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4401784 1 + 4432243 C i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2494788 1 + 12154212 C i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19617921 1 - 27850971 C i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1685313 1 - 2296528 C i dasNov3.JH570393 C 0 C 0 e cerAty1.NW_012005170v1 41672 14 + 97742 I e rheMac8.chrUn_NW_014858614v1 25687 774 - 85730 I e macNem1.NW_012020287v1 43029 1 + 4899514 I e macFas5.chr6 46050 729 - 181584905 I e nomLeu3.chr11 155835 49227 - 123690457 I a score=19243.000000 s hg38.chr3_KI270784v1_alt 155084 2 + 184404 TG s panTro5.chr3 48115 2 - 202621043 TG i panTro5.chr3 C 0 C 0 s panPan2.chr3 43062 2 - 205426864 TG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 61612 2 + 508821 TG i gorGor5.CYUI01015884v1 C 0 C 0 s macFas5.chr6 46779 2 - 181584905 TG i macFas5.chr6 I 729 C 0 s macNem1.NW_012020287v1 43030 2 + 4899514 TG i macNem1.NW_012020287v1 I 1 C 0 s cerAty1.NW_012005170v1 41686 2 + 97742 TG i cerAty1.NW_012005170v1 I 14 I 73 s chlSab2.chr12 3691468 2 - 108555830 TG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 42091 2 + 85016 TG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1012394 2 - 1267912 TG i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46458164 2 - 47448759 TA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 4194 2 + 8899380 TA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4401785 2 + 4432243 TG i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2494789 2 + 12154212 TG i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19617922 2 - 27850971 TG i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1685314 2 - 2296528 TG i dasNov3.JH570393 C 0 C 0 e rheMac8.chrUn_NW_014858614v1 25687 774 - 85730 I e nomLeu3.chr11 155835 49227 - 123690457 I a score=1740723.000000 s hg38.chr3_KI270784v1_alt 155086 185 + 184404 TCTATGATAAGGGGACTTCACTGGCAGGAAGCCTGCTTTCCCACCATGCAAATACTGAAGCACTAAACAAGGTATA--GATCAATCAACTTTCTTTTCAAAA-----------TAT-----------TTGTTTTAACATTGACATAGGTAAGAGTCAATTTTTCATATTTGGATGATCAGGCATTCC-TGAATGAAAATATTTTGAAATA s panTro5.chr3 48117 187 - 202621043 TGTATGATAAGGGGACTTCACTGGCAGGAAGCCTGCTTTCCCACCATGCAAATACTGAAGCACTAAACAAGGTATATAGATCAATCAACTTTCTTTTCAAAA-----------TAT-----------TTGTTTTAACATTGACATAGGTAAGAGTCAATTTTTCATATTTGGATGATCAGGCATTCC-TGAATGAAAATATCTTGAAATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 43064 187 - 205426864 TGTATGATAAGGGGACTTCACTGGCAGGAAGCCTGCTTTCCCACCATGCAAATACTGAAGCACTAAACAAGGTATATAGATCAATCAACTTTCTTTTCAAAA-----------TAT-----------TTGTTTTAACATTGACATAGGTAAGAGTCAATTTTTCATATTTGGATGATCAGGCATTCC-TGAATGAAAATATCTTGAAATA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 61614 185 + 508821 TGTATGATAAGGGGACTTCACTGGCAGGAAACCTGCTTTCCCACCATGCAAATACTGAAGCACTAAACAAGGTATA--GATCAATCAACTTTCTTTTCAAAA-----------TAT-----------TTGTTTTAACATTGACATAGGTAAGAGTCAATTTTTCATATTTGGATGATCAGGCATTCC-TGAATGAAAATATTTTGAAATA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 26461 185 - 85730 TGTATAATAAGGGGACTTCACTGGCAGGAAAACTGCTTTCCCACCATGCAAATATTGAAGCACTAAACAAGGTATA--GATCAATCAACTTTCTTTTCAAAA-----------TAT-----------TTGTTTTAACATTGACATAGGTAAGAGTCAATTTTTCATATTTGGAAGATCAGGCATTCC-GGAATGAAAATATTTCAAAATA i rheMac8.chrUn_NW_014858614v1 I 774 C 0 s macFas5.chr6 46781 185 - 181584905 TGTATAATAAGGGGACTTCACTGGCAGGAAAACTGCTTTCCCACCATGCAAATATTGAAGCACTAAACAAGGTATA--GATCAATCAACTTTCTTTTCAAAA-----------TAT-----------TTGTTTTAACATTGACATAGGTAAGAGTCAATTTTTCATATTTGGAAGATCAGGCATTCC-GGAATGAAAATATTTCAAAATA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 43032 185 + 4899514 TGTATAATAAGGGGACTTCACTGGCAGGAAAACTGCTTTCCCACCATGCAAATATTGAGGCACTAAACAAGGTATA--GATCAATCAACTTTCTTTTCAAAA-----------TAT-----------TTGTTTTAACATTGACATAGGTAAGAGTCAATTTTTCATATTTGGAAGATCAGGCATTCC-GGAATGAAAATATTTCAAAATA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 41761 185 + 97742 TGTATAATAAGGGGACTTCACTGGCAGGAAAACTGCTTTCCCACCATGCAAATATTGAAGCACTAAACAAGGTATA--GATCAATCAACTTTCTTTTCAAAA-----------TAT-----------TTATTTTAACATTGACATAGATAAGAGTCAATTTTTCATATTTGGAAGATCAGGCATTCC-TGAATGAAAATATTTCAAAATA i cerAty1.NW_012005170v1 I 73 C 0 s chlSab2.chr12 3691470 183 - 108555830 TGTATAATAAGGGGACTTCACTGGCAGAGAAACTGCTTTCCCACCATGCAAATATTGAAGCACTAAATGAGGTATA--GATCAATCAACTTTCTTTTCAAAA-----------TGT-----------TTGTTTTACCATTGACATAGTTAAGAGTCAGTTTTTCATATTTGGAA-CTCAAGTGTTTC-TGAATAAAAATATTTTGAAAT- i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 42093 185 + 85016 TGTATAATAAGGGGACTTCACTGGCAGGAAAACTGCTTTCCCACCATGCAAATATTGAAGCACTAAACAAGGTATA--GATCAATCAACTTTCTTTTCAAAA-----------TAT-----------TTATTTTAACATTGACATAGATAAGAGTCAATTTTTCATATTTGGAAGATCAGGCATTCC-TGAATGAAAATATTTCAAAATA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1012396 179 - 1267912 TGTATAATAAGGGGACTTCACTGGCAGGAAAACTGCTTTTCCACCATGCAAATATTGAAGCACTAAACTAG----A--GATCAATCAACTTTCTTTTCAAAA-----------TAT-----------TTGTTTTAACAATGAC--AGGTAAGAGTCAATTTTTCATATTTGGAAGATTAGGCATTCC-TGAATGAAAATATTTCAAAATA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46458166 186 - 47448759 TATATAATAGCGTGACTTCACTGGCAGAAAAACTGCTCTCCCACCAGGCAAATATTGAAGCAATAAACAAGGTATC--GATCAATCGACTTTCTTTTCAAAA-----------CAT-----------TTGTTTTAACATTGACATAGGTAAGGGTCGATTTTTCATGTTTGGAAACTCAAGCCTTCCTTAAATGAAAATATTTTGAAATA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 4196 186 + 8899380 TATATAATAACGGGACTTCACTGGCAGAAAAACTTCTTTCCCACCGTGCAAATATTGAAGCAATAAACAAGGTATA--GCTCAATCAACTTTCTTTTCGAAA-----------TAT-----------TTGTTTTAACATTGATATAGGTAAGGATTAATTTTTCATGTTTAGAAGCTGAAGCACTCCCTGAATGAAAATATTTTGAAATA i saiBol1.JH378197 C 0 M 1174 s cebCap1.NW_016107581v1 4401787 186 + 4432243 TGTATAATAAAGGGATTTTATTGGCAGAAAAACTGCTTTCTTACCATGCAAATATTGAAGCAATAAACAAGGTATA--GATCAATGAATTTTCTTTTCAAAA-----------TAT-----------TTGTTCTAACATTGACATAGGTAAGGGTTGATTTTTCAAGTTTGGAATCTCAAGCATTCCCTGAATGAAAATATTTTGAAATA i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2494791 186 + 12154212 TGTATAATAAAGGGATTCTATTGGCAGAAAACCTGCTTTCCCACCATGCAAATATTGAAGCAATAAGCAAGGTATA--GATCAATCAATTTTCTTTTCAAAA-----------TAT-----------TTGTTCTAACATTGAAATAGGTAAGAGTTGATTTTTCAAGTTTGGAATCTCAAGCATTCCCTGAATGAAAATATTTTGAAATA i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19617924 196 - 27850971 TCTATAATGAAAATATACCAATAACAGCAAAACTGCTTTCACACAGAGCAAATATTGAAGTGAAGAACAAGGTATA--AATCAGCCAGCTTTACTTTCAAAACATTTGAAATGCAT-----------TTGTTTTGACATTT-CAAAAGTAAAGATCAATTTTCCATATTGGGAAGTTTAAACATTCCCTGAACAAAAATATTTTCAAAAA i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1685316 195 - 2296528 TCTATGGTCAGAATATACCAATAGCAGCAAAACTGCTTTCTCACAATGCAAATATTGAAGCAAGAAACAAGGTGTG--TATTTACCAGTTTCACTTACAAAA-----------TATTTGAAATAAAATTGTTTTAATATTGATGTAACT-AGTGTTTATTTTATATATTTGGAAGCTGAAGCATTCCCTGAATGAAAATGTTT-GGAATA i dasNov3.JH570393 C 0 C 0 e nomLeu3.chr11 155835 49227 - 123690457 I a score=465805.000000 s hg38.chr3_KI270784v1_alt 155271 67 + 184404 GCTTAATTGTCTCAGGTTTTACTTTAAATATTGATACTTTT-----------AAAGAAGCATTAGAGGGCACAGCTTG s panTro5.chr3 48304 67 - 202621043 GCTTAATTGTCTCAGATTTTACTTTAAATATTGATACTTTT-----------AAAGAAGCATTAGAGGGCACAGCTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 43251 67 - 205426864 GCTTAATTGTCTCAGATTTTACTTTAAATATTGATACTTTT-----------AAAGAAGCATTAGAGGGCACAGCTTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 61799 67 + 508821 GCTTAATTGTCTCAGATTTTACTTTAAATATTGATACTTTT-----------AAAGAAGCATTAGAGGGCACAGCTTG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 26646 67 - 85730 ACTGAATTGTCTAAGATTTTACTTTAAATATTGATACTTTT-----------AAAGAAGCATTAGTGGGCACAGCTTG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 46966 67 - 181584905 ACTGAATTGTCTAAGATTTTACTTTAAATATTGATACTTTT-----------AAAGAAGCATTAGCGGGCACAGCTTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 43217 67 + 4899514 ACTGAATTGTCTAAGATTTTACTTTAAATATTGATACTTTT-----------AAAGAAGCATTAGCGGGCACAGCTTG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 41946 67 + 97742 ACTGAATTGTCTAAGATTTTACTTTAAATATTGATACTTTT-----------AAAGAAGCATTAGCGGGCACAGCTTG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3691653 63 - 108555830 ----AATTGTCTAAAATTTTATTTTAAATATTGATACTTTT-----------AAAGAAGCATTAGAGGGCACAGCTTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 42278 67 + 85016 ACTGAATTGTCTAAGATTTTACTTTAAATATTGATACTTTT-----------AAAGAAGCATTAGCGGGCACAGCTTG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1012575 67 - 1267912 GCTGAATAGTCTAAGATTTTACTTTAAATATTGATACTTTT-----------AAAGAAGCATTAGAGGGCATAGCTTG i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46458352 67 - 47448759 ACTTAATTGTCTAAGATTTTACCTTAAATATTGATACTTTT-----------AAAGAAACATTAGAGGGCACAGCTTT i calJac3.chr18 C 0 C 0 s cebCap1.NW_016107581v1 4401973 46 + 4432243 -----ATTGTCTCAGATTCTACTTTAAATATTGATAATTTT-----------AAAAAAG----------------GTT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2494977 47 + 12154212 ----ACTTGTCTCAGATTCTACTTTAAATATTGATACTTTT-----------AAAGAAG----------------GTT i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19618120 64 - 27850971 ACT---TTGTTTAAAATTTAACTTCTAACATTGATACTTTA-----------AAAGCGACATTAGAgcttggtgcttg i otoGar3.GL873538 C 0 I 286 s dasNov3.JH570393 1685511 72 - 2296528 ACTTAATTATCTAAAATCCTCATTCA-----TGCTATTTTTCTAATTAGTGCAAAACAACACAAGAAAGCA-AATTTG i dasNov3.JH570393 C 0 C 0 e saiBol1.JH378197 4382 1174 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=95387.000000 s hg38.chr3_KI270784v1_alt 155338 10 + 184404 TTTAGTGCAC s panTro5.chr3 48371 10 - 202621043 TTTAGTGCAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 43318 10 - 205426864 TTTAGTGCAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 61866 10 + 508821 TTTAGTGCAC i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 26713 10 - 85730 TTTAGTGCAC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 47033 10 - 181584905 TTTAGTGCAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 43284 10 + 4899514 TTTAGTGCAC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 42013 10 + 97742 TTTAGTGCAC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3691716 10 - 108555830 TTTAGTGCAC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 42345 10 + 85016 TTTAGTGCAC i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1012642 10 - 1267912 TTTAGTGCAC i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46458419 10 - 47448759 TTTAGTGCAC i calJac3.chr18 C 0 C 0 s cebCap1.NW_016107581v1 4402019 10 + 4432243 TTTAGTGCAT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2495024 10 + 12154212 TTTAGTGCAT i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19618470 10 - 27850971 TTTTGTGCAT i otoGar3.GL873538 I 286 C 0 s dasNov3.JH570393 1685583 10 - 2296528 CTTTGTAAAC i dasNov3.JH570393 C 0 I 662 e saiBol1.JH378197 4382 1174 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=290615.000000 s hg38.chr3_KI270784v1_alt 155348 41 + 184404 TTATGGGAAGTATTTGTGAA-----------TTTGTTAAGGTAAAACTTCTT s panTro5.chr3 48381 41 - 202621043 TTATGGGAAGTATTTGTGAA-----------TTTGTTAAGGTAAAACTTCTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 43328 41 - 205426864 TTATGGGAAGTATTTGTGAA-----------TTTGTTAAGGTAAAACTTCTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 61876 41 + 508821 TTATGGGAAGTATTTGTGAA-----------TTTGTTAAGGTAAAACTTCTT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 26723 41 - 85730 TTATGGGAAATATTTGTGAA-----------TTTTTCAAGGGAAGACTTCTT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 47043 41 - 181584905 TTAGGGGAAATATTTGTGAA-----------TTTTTCAAGGGAAGACTTCTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 43294 41 + 4899514 TTATGGGAAATATTTGTGAA-----------TTTTTCAAGGGAAGACTTCTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 42023 41 + 97742 TTATGGGAAATATTTGTGAA-----------TTTTTCAAGGGAAGACTTCTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3691726 41 - 108555830 TTATGGGAAATATTTGTGAA-----------TTTGTTAAGGTAAAACTTCTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 42355 41 + 85016 TTATGGGAAATATTTGTGAA-----------TTTTTCAAGGGAAGACTTCTT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1012652 41 - 1267912 TTATGGGAAATATTTGAGAA-----------TTTTTCAAGGGAAAACTTCTT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46458429 42 - 47448759 TTATGGGAAATCTTTGTGAA----------TCTGTTCAAGGTAAAACTTTTT i calJac3.chr18 C 0 I 5 s cebCap1.NW_016107581v1 4402029 43 + 4432243 TTATGGAAATTATTTGTGAA---------TTTTTTTCAAGATAAAACTTTTT i cebCap1.NW_016107581v1 C 0 I 4 s aotNan1.NW_018507789v1 2495034 42 + 12154212 TTATGGTAATTATTTGTGAA----------TTTTTTCAAGGTAAAAATTTTT i aotNan1.NW_018507789v1 C 0 I 27 s otoGar3.GL873538 19618480 52 - 27850971 TTATAGTAAATATTTGCAGAAACATTGAATTTTTTTAAAGGTGAAACTTTTT i otoGar3.GL873538 C 0 I 5 e dasNov3.JH570393 1685593 662 - 2296528 I e saiBol1.JH378197 4382 1174 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=169504.000000 s hg38.chr3_KI270784v1_alt 155389 32 + 184404 C--AAGTATTTGTTTCCTACCCCAGG------TGTA----TTTT s panTro5.chr3 48422 32 - 202621043 C--AAGTATTTGTTTCCTACCCCAGG------TGTA----TTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 43369 32 - 205426864 C--AAGTATTTGTTTCCTACCCCAGG------TGTA----TTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 61917 32 + 508821 C--AAGTATTTGTTTCCTACCCCAGG------TGTA----TTTT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 26764 32 - 85730 T--AAGTATCTGTTTCCTACCCCAGG------TGTA----TTTT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 47084 32 - 181584905 T--AAGTATCTGTTTCCTACCCCAGG------TGTA----TTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 43335 32 + 4899514 T--AAGTATCTGTTTCCTACCCCAGG------TGTA----TTTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 42064 32 + 97742 T--AAGTATCTGTTTCCTACCCCAGG------TGTA----TTTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3691767 38 - 108555830 TTCAAATATTTATTTCCTACCCCAGG------TGTATTTTTTTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 42396 32 + 85016 T--AAGTATCTGTTTCCTACCCCAGG------TGTA----TTTT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1012693 32 - 1267912 C--AAGTATTTGTTTCCTACCCCAGG------TGTA----TTTT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46458476 38 - 47448759 C--AAATATTTGTTTCCTACCACAGGTTTTGTTTTG----TTTT i calJac3.chr18 I 5 I 3 s cebCap1.NW_016107581v1 4402076 21 + 4432243 C--AAA-----------TACCCCAGG------GTTG----TTTT i cebCap1.NW_016107581v1 I 4 I 3 s otoGar3.GL873538 19618537 29 - 27850971 C--AAATACTTTTTACCCAC--CAGC------TTTT----TTT- i otoGar3.GL873538 I 5 C 0 e dasNov3.JH570393 1685593 662 - 2296528 I e aotNan1.NW_018507789v1 2495076 27 + 12154212 I e saiBol1.JH378197 4382 1174 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=48034.000000 s hg38.chr3_KI270784v1_alt 155421 12 + 184404 --TTTTT-CTAATTA--- s panTro5.chr3 48454 13 - 202621043 --TTTTTTCTAATTA--- i panTro5.chr3 C 0 C 0 s panPan2.chr3 43401 13 - 205426864 --TTTTTCTTAATTA--- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 61949 11 + 508821 --TTTT--CTAATTA--- i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 26796 10 - 85730 --TTT---CTAATTA--- i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 47116 10 - 181584905 --TTT---CTAATTA--- i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 43367 10 + 4899514 --TTT---CTAATTA--- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 42096 10 + 97742 --TTT---CTAATTA--- i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3691805 10 - 108555830 --TTT---CTAATTA--- i chlSab2.chr12 C 0 I 13 s manLeu1.NW_012101680v1 42428 10 + 85016 --TTT---CTAATTA--- i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1012725 10 - 1267912 --TTT---CTAATTA--- i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46458517 12 - 47448759 --TTTCC-CTAATTA--- i calJac3.chr18 I 3 I 1 s cebCap1.NW_016107581v1 4402100 10 + 4432243 --TTT---CTGATTA--- i cebCap1.NW_016107581v1 I 3 I 8 s aotNan1.NW_018507789v1 2495103 10 + 12154212 --TTT---CTAATTA--- i aotNan1.NW_018507789v1 I 27 I 8 s otoGar3.GL873538 19618566 15 - 27850971 CCTCC---CTACTCTTTG i otoGar3.GL873538 C 0 C 0 e dasNov3.JH570393 1685593 662 - 2296528 I e saiBol1.JH378197 4382 1174 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=40906.000000 s hg38.chr3_KI270784v1_alt 155433 56 + 184404 CGT---AAAacacacacacacacacacacacacacacacacacacacacacacacacGC s panTro5.chr3 48467 22 - 202621043 TGT---AAAacacacacacacac----------------------------------gc i panTro5.chr3 C 0 C 0 s panPan2.chr3 43414 22 - 205426864 TGT---AAAacacacacacacac----------------------------------gc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 61960 50 + 508821 TGT---AAAacacacacacacac------acacacacacacacacacacacacacacGC i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 26806 20 - 85730 TGT---AAAACACACACACACAC------------------------------------ i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 47126 20 - 181584905 TGT---AAAACACACACACACAC------------------------------------ i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 43377 20 + 4899514 TGT---AAAACACACACACACAC------------------------------------ i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 42106 18 + 97742 TGT---AAA--ACACACACACAC------------------------------------ i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 42438 18 + 85016 TGT---AAAACACACACACAC-------------------------------------- i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1012735 18 - 1267912 TGT---AAAACACACACACAC-------------------------------------- i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46458530 21 - 47448759 TGTAACAAAAACCACACACAC-------------------------------------- i calJac3.chr18 I 1 C 0 s otoGar3.GL873538 19618581 9 - 27850971 TGT---AAAACA----------------------------------------------- i otoGar3.GL873538 C 0 C 0 e dasNov3.JH570393 1685593 662 - 2296528 I e aotNan1.NW_018507789v1 2495113 8 + 12154212 I e cebCap1.NW_016107581v1 4402110 8 + 4432243 I e saiBol1.JH378197 4382 1174 + 8899380 M e chlSab2.chr12 3691815 13 - 108555830 I e nomLeu3.chr11 155835 49227 - 123690457 I a score=3359.000000 s hg38.chr3_KI270784v1_alt 155489 3 + 184404 AGA s panTro5.chr3 48489 3 - 202621043 aga i panTro5.chr3 C 0 C 0 s panPan2.chr3 43436 3 - 205426864 aga i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 62010 3 + 508821 AGA i gorGor5.CYUI01015884v1 C 0 C 0 s cebCap1.NW_016107581v1 4402118 3 + 4432243 AAA i cebCap1.NW_016107581v1 I 8 C 0 s aotNan1.NW_018507789v1 2495121 3 + 12154212 AAA i aotNan1.NW_018507789v1 I 8 C 0 s otoGar3.GL873538 19618590 1 - 27850971 --A i otoGar3.GL873538 C 0 C 0 e dasNov3.JH570393 1685593 662 - 2296528 I e calJac3.chr18 46458551 0 - 47448759 C e cerAty1.NW_012005170v1 42124 0 + 97742 C e saiBol1.JH378197 4382 1174 + 8899380 M e colAng1.NW_012116822v1 1012753 0 - 1267912 C e rheMac8.chrUn_NW_014858614v1 26826 0 - 85730 C e manLeu1.NW_012101680v1 42456 0 + 85016 C e chlSab2.chr12 3691815 13 - 108555830 I e macNem1.NW_012020287v1 43397 0 + 4899514 C e macFas5.chr6 47146 0 - 181584905 C e nomLeu3.chr11 155835 49227 - 123690457 I a score=624653.000000 s hg38.chr3_KI270784v1_alt 155492 111 + 184404 CACAGGAAAAG---AAT--TTACCCTGGAAATAGGCTTTA--TCTTAAAACTCAAAACAAAACTGAAGCAACTTGCAATAA-ATGGAAATCTTGCTGCTGCTGACAGTTTTCTCAAAAA s panTro5.chr3 48492 111 - 202621043 cacaGGAAAAG---AAT--TTACCCTGGAAATAGGCTTTA--TCTTAAAACTCAAAACAAAACTGAAGCAACTTGCAATAA-ATGGAAATCTTGCTGCTGCTGACAGTTTTCTCAAAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 43439 111 - 205426864 cacaGGAAAAG---AAT--TTACCCTGGAAATAGGCTCTA--TCTTAAAACTCAAAACAAAACTGAAGCAACTTGCAATAA-ATGGAAATCTTGCTGCTGCTGACAGTTTTCTCAAAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 62013 111 + 508821 CACAGGAAAAG---AAT--TTACCCTGGAAATAGGCTTTA--TCTTAAAACTCAAAACAAAACTGAAGCAACTTGCAATAA-ATGGAAATCTTGCTGCTGCTGACAGTTTTCTCAAAAA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 26826 88 - 85730 -----GAAAAG---AAC--TTACCCTGGAAATAGGCTTTA--TCTTAAAACTCAGAACAAAACTAAAGCAA-------------------CTTTCTGCTGCTGACAGTTTTCTCAAAAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 47146 88 - 181584905 -----GAAAAG---AAC--TTACCCTGGAAATAGGCTTTA--TCTTAAAACTCAGAACAAAACTAAAGCAA-------------------CTTTCTGCTGCTGACAGTTTTCTCAAAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 43397 88 + 4899514 -----GAAAAG---AAC--TTACCCTGGAAATAGGCTTTA--TCTTAAAACTCAGAACAAAACTAAAGCAA-------------------CTTTCTGCTGCTGACAGTTTTCTCAAAAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 42124 88 + 97742 -----GAAAAG---AAC--TTACCCTGGAAATAGGCTTTA--TCTTAAAACTCAGAACAAAACTAAAGCAA-------------------CTTGCTGCTGCTGACAGTTTTCTCAAAAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3691828 105 - 108555830 CACA-GGAAAA---AAA--TTACCCTGGAAACAGGTTTTA--TCTTAAAACT-----CAAAACTAAAGCAACTTACAATAA-ATGGAAGTCTTGCTGCTGCTGACAGTTTTCTAAAAAA i chlSab2.chr12 I 13 C 0 s manLeu1.NW_012101680v1 42456 88 + 85016 -----GAAAAG---AAC--TTACCCTGGAAATAGGCTTTA--TCTTAAAACTCAGAACAAAACTAAAGCAA-------------------CTTGCTGCTGCTGACAGTTTTCTCAAAAA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1012753 88 - 1267912 -----GAAAAG---AAC--TTACCCTGCAAATAGGCTTTA--TCTTAAAACTCAGAACAAAACTAAAGCAA-------------------CTTGTTGCTGCTGACAGTTTTCTCAAAAA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46458551 109 - 47448759 ---AGGAAAGA---AAAATCTACCCTGGAAATAGGCTTTA--TCTTAACACTGA-AACAAAACTAAATCGACTTGCAGTAA-ATGAAAATCTTGCTGCTGCTGACAATTTTCTTTAAAA i calJac3.chr18 C 0 C 0 s cebCap1.NW_016107581v1 4402121 112 + 4432243 CACAGGAAAAA---AAA--TTATCCTGGAAATAGACTTTATCTCTTAAAACTCA-AACAAAATTAAAGCAACTTACCATAA-ATGGAAATCTTGGTGATGCTGACAATTTTCTTTAAAA i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2495124 109 + 12154212 CACAGGAAAAA---AA---TTATCTTAGAAATAGGCTTTA--TCTTAAAACTCA-AACAAAATTAAAGCAACTTACCATAA-ATGGAAATCTTGGTGATGCTGACAATTTTCTTAAAAA i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19618591 112 - 27850971 CAAATGGAAAGCAAAGT--TTTCCCTGGCTATAGGCTTTA--TTTTGAAACCCA-AACGAAATAAAAACATTTTAGAAAAATATGGAGATCTTGCTGCTATTGATAGGTT--CTAAACA i otoGar3.GL873538 C 0 C 0 e dasNov3.JH570393 1685593 662 - 2296528 I e saiBol1.JH378197 4382 1174 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=-19500.000000 s hg38.chr3_KI270784v1_alt 155603 12 + 184404 A----AAAAAAAAACT s panTro5.chr3 48603 11 - 202621043 A----AAAAAAAA-CT i panTro5.chr3 C 0 C 0 s panPan2.chr3 43550 16 - 205426864 AAATCAAAAAAAAACT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 62124 6 + 508821 A----AAAAA------ i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 26914 5 - 85730 A----AA-------CT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 47234 5 - 181584905 A----AA-------CT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 43485 5 + 4899514 A----AA-------CT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 42212 5 + 97742 A----AA-------CT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3691933 3 - 108555830 A----AG--------- i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 42544 5 + 85016 A----AA-------CT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1012841 5 - 1267912 A----AA-------CT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46458660 4 - 47448759 G----A--------CT i calJac3.chr18 C 0 C 0 s cebCap1.NW_016107581v1 4402233 6 + 4432243 A----AAT------CT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2495233 6 + 12154212 A----AAA------CT i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19618703 5 - 27850971 A----AA-------TT i otoGar3.GL873538 C 0 I 287 s dasNov3.JH570393 1686255 12 - 2296528 A----AAAAAAAAAGT i dasNov3.JH570393 I 662 C 0 e saiBol1.JH378197 4382 1174 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=1957611.000000 s hg38.chr3_KI270784v1_alt 155615 253 + 184404 GATGTGCCTTTCAGTGG-CAAAGTTTAAGAGGG---AAAAATGGG--GAAGGAAAAGGAGAG--CAATCAAA-AACATGTAGGT-C-ACTTGGAAATTAGGTAA-TGAGGAAAAA-TGCTAATAAGAGGTTTTGTTTTTTAGTTTGTTGTTTTTCCAGTTT--ATGTATTGAG--ACAAAGTGCTCTTCAGCTTTGGGG-TAATTATTTTTGGTTTGGTAAACAAAGTGATTGA------AACTTGCTTAAAGATTAATTTTTAGAGGACTCTGAGG s panTro5.chr3 48614 253 - 202621043 GATGTGCCTTTCAGTGG-CAAAGTTTAAGAGGG---AAAAATGGG--GAAGGAAAAGGAGAG--CAATCAAA-AACATGTAGGT-C-ACTTGGAAATTAGGTAA-TGAGGAAAAA-TGCCAATAAGAGGTTTTGTTTTTTAGTTTGTTGTTTTTCCAGTTT--ATGTATTGAG--ACAAAATGCTCTTCAGCTTTGGGG-TAATTATTTTTGGTTTGGTAAACAAAGTGATTGA------AACTTGCTTAAAGATTAATTTTTAGAGGACTCTGAGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 43566 253 - 205426864 GATGTGCCTTTCAGTGG-CAAAGTTTAAGAGGG---AAAAATGGG--GAAGGAAAAGGAGAG--CAATCAAA-AACATGTAGGT-C-ACTTGGAAATTAGGTAA-TGAGGAAAAA-TGCCAATAAGAGGTTTTGTTTTTTAGTTTGTTGTTTTTCCAGTTT--ATGTATTGAG--ACAAAATGCTCTTCAGCTTTGGGG-TAATTATTTTTGGTTTGGTAAACAAAGTGATTGA------AACTTGCTTAAAGATTAATTTTTAGAGGCCTCTGAGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 62130 254 + 508821 -ATGTGCCTTTCAGTGG-CAAAGTTTAAGAGGG---AAAAATGGG--GAAGGAAAAGGAGAG--CAATCAAA-AACATGTAGGT-C-ACTTGGAAATTAGGTAA-TGAGGAAAAA-TGCCAATAAGAGGTTTTGTTTTTTAGTTTGTTGTTTTTCCAGTTTGAATATATTGAG--ACAAAGTGCTCTTCAGCTTTGGGG-TAATTATTTTTGGTTTGGTAAACAAAGTGATTGA------AACTTGCTTAAAGATTAATTTTTAGAGGACTCTGAGG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 26919 246 - 85730 GATGTGCCTTTCAGT-G-CAAGGTTTAAGAGGG---AAAAATGGG--GAGGGAAAAGGAGAG--CAATCAAA-AACATGTAGGT-C-ACTTGGAAATTAGGTAA-TGAGGAAAAA-TGCCAATAAGAGGTtttgtttgttagtttgttgtttTTCCAGTTT--ATGTAT--------GAAGTGCTCTTCAGCTTTGGGG-TAATCATTTTTGGTTTGGTAAACACAGTAATTGA------AACTTGCCTAAACGTTAATTTTTAGAGGACTCTGAGG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 47239 246 - 181584905 GATGTGCCTTTCAGT-G-CAAGGTTTAAGAGGG---AAAAATGGG--GAGGGAAAAGGAGAG--CAATCAAA-AACATGTAGGT-C-ACTTGGAAATTAGGTAA-TGAGGAAAAA-TGCCAATAAGAGGTtttgtttgttagtttgttgtttTTCCAGTTT--ATGTAT--------GAAGTGCTCTTCAGCTTTGGGG-TAATCATTTTTGGTTTGGTAAACACAGTAATTGA------AACTTGCCTAAACGTTAATTTTTAGAGGACTCTGAGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 43490 246 + 4899514 GATGTGCCTTTCAGT-G-CAAGGTTTAAGAGGG---AAAAATGGG--GAGGGAAAAGGAGAG--CAATCAAA-AACATGTAGGT-C-ACTTGGAAATTAGGTAA-TGAGGAAAAA-TGCCAATAAGAGGTtttgtttgttagtttgttgtttTTCCAGTTT--ATGTAT--------GAAGTGCTCTTCAGCTTTGGGG-TAATCATTTTTGGTTTGGTAAACACAGTAATTGA------AACTTGCCTAAACGTTAATTTTTAGAGGACTCTGAGG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 42217 246 + 97742 GATGTGCCTTTCAGT-G-CAAGGTTTAAAAGGG---AAAAATGGG--GAGGGAAAAGGAGAG--CAATCAAA-AACATGTAGGT-C-ACTTGGAAATTAGGTAA-TGAGGAAAAA-TGCCAATAAGAGGTTTTGTTTTTTAGTTTGTTGTTTTTCCAGTTT--ATGTAT--------AAAGTGCTCTTCAGCTTTGGGG-TAATCATTTTTGGTTTGGTAAACACAGTAATTGA------AACTTGCCTAAACGTTAATTTTTAGAGGACTCGGAGG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3691936 253 - 108555830 GATGTATCTTTCATTGG-TAAGGTTTAAGAGGG---AAAAATGGG--AAGGGAAAAGGGGAG--CAATCAAA-AACATGCAGGT-C-ACTTGGAAATTAGGTAA-TGAGGGAAAA-TGCCAAGAAGAGGTTTTGTTTTTTAGTTTGTTGTTTTTCCAGTTT--ATGTATTGAG--ACAAAGTGCTCTTCAGCTTTGGGG-TAATCATTTTTGGTTTGGTAAGCAGAGTGATTGA------AACTTGCCTAAAGATTAATTTTTAGAGGACTCTGAGG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 42549 246 + 85016 GATGTGCCTTTCAGT-G-CAAGGTTTAAAAGGG---AAAAATGGG--GAGGGAAAAGGAGAG--CAATCAAA-AACATGTAGGT-C-ACTTGGAAATTAGGTAA-TGAGGAAAAA-TGCCAATAAGAGGTTTTGTTTTTTAGTTTGTTGTTTTTCCAGTTT--ATGTAT--------AAAGTGCTCTTCAGCTTTGGGG-TAATCATTTTCGGTTTGGTAAACACAGTAATTGA------AACTTGCCTAAACGTTAATTTTTAGAGGACTCTGAGG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1012846 246 - 1267912 GATGTGCCTTTCAGT-G-CAAGGTTTAAGAGGG---AAAAATGGG--GAGGGAAAGGGAGAG--CAATCAAA-AACATGCAGGT-C-CCTTGGAAATTAGGTAA-TGAGGAAAAA-TGCCAATAAGAGGTTTTGTTTTTTAGTTTGTTGTTTTTCCAGTTT--ATGTAT--------AAAGTGCTCCTCAGCTTTGGGG-TAATCATTTTTGGTTTGGTAAACAGAGTGATTGA------AACTTGCCTAAACATTAATTTTTAGAGGACTCTGAGG i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46458664 237 - 47448759 GATGTATCTTTCAGTGG-CAAGGCTTAAGAGGA---AAAAATGGA--GAGGG-AAAGGAGAG--CAATGAGATAATATGCAGGT-C-ACTTGGAAATTAGGTAA-TGAGGGAAAACTGTAAAGAAGAGGTTTCGTTTCTTAGTTGGTTGTTTTTCCAGCTT--ACGTATTGAG--ACAAAGTGCTCTTCAGC-----------TCATTTTTGGTTTGGTAAAGAGAGTGATTGA------AACTTGCCT-------AATTTTTAGAGGACTCTGAGG i calJac3.chr18 C 0 M 1769 s cebCap1.NW_016107581v1 4402239 251 + 4432243 CCCGTATCTTTCAGTAT-CAAGGCTTAAGAGGA---GAAAATGGG--AAGGGAAAAGGAGAG--CATTCAGA-AATATACAGGT-C-ACTTAGAAATTAGGTAA-TGAGGGAAAAAGGCAAAGAAGAGGTTTTGTTTTTTAATTTGTTGCTTTTTT-GTTT--ATGTATTCAG--ACAAAGTGCTCTTCAGCTTTGGGG-TAATTACTTTTGGTTTGGTAAAGAGAATGATTAA------AACTTGCCTAAAGATCAAGTTTTAGAGGA--CTGAGG i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2495239 252 + 12154212 CATGTATCTTTCAGTAG-CAAGGCTTAAGAGGA---AAACATGGG--AAGGGAAAAGGAGAG--CAATCAGA-AATATACAGGT-C-ACTTAGAAATTAGGTAA-TGAGGGAAAA-GGCAAAGAAGAAGttttgttttttaatttgttgttttttg-gttt--atgtattAAG--GCAAAGTGCTCTTCGGCTTTGGGG-TAATCATTTTTGGTTTGGTAAAGGGAATGATTAA------AACTCGCCTAAAGATCAAGTTTTAGAGGACTCTGAGG i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19618995 259 - 27850971 GATTTATCTCTAAGTAG-CAAGACTTAAGAGGA---AAAAATGGA--GAGGGAAAAACAGAG--TAATCAGA-AACATGCAGGCAA-ATTTGGAAGTTAGGTAATTGAGGGAAAA-TACCAAGAAG-TTTTTTGTTTTTTGGTTTTTTTTTTTACATGTTT--ATATGATTAG--ACAGGGTTCTCTTTAGTTTTGGGGATCATCATTCTCAGTTTGGGAA--AGAGTGATTTAGTGGTGATCTTGCGTAGGGATCAATTTTAGGAGGACTCTGAAC i otoGar3.GL873538 I 287 C 0 s dasNov3.JH570393 1686267 252 - 2296528 GATTTATCTCTCAATGGCCAAAGCTTAAAAGGGGAAAAAAATAGGAAAAGGAAAAAGGAGAGAACAATCAGA-AATATTCAGGG-CAATTTTGAAATTTAGTAATTTTGGGAAAA-TATGAAGAAGAGATTT--------------TTTTTTTTTCACTTT--ATATACTTGGGTGCAATGTGCTTTTCAATTTTGTGGATAATAATTCTTATTTTTGGGAAGCATGAGTTATA------AATTTGCCTAGTGATCACTTTTAGGGGGATTATGAGG i dasNov3.JH570393 C 0 C 0 e saiBol1.JH378197 4382 1174 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=373332.000000 s hg38.chr3_KI270784v1_alt 155868 49 + 184404 AAACCAGATTGGCTGTGAATAGCTGGTGATGCAGTGAGAAACACTTCAG s panTro5.chr3 48867 49 - 202621043 AAACCAGATTGGCTGTGAATAGCTGGTGATGAAGTGAGAAACACTTCAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 43819 49 - 205426864 AAACCAGATTGGCTGTGAATAGCTGGTGATGAAGTGAGAAACACTTCAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 62384 49 + 508821 AAACCAGATTGGCTGTGAATAGCTGGTGATGAAGTGAGAAACACTTCAG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 27165 49 - 85730 AAACCAGATTGGCCATGGATAGATGGTGATGAAGTGAGAAACACTTCAG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 47485 49 - 181584905 AAACCAGATTGGCCATGGATAGATGGTGATGAAGTGAGAAACACTTCAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 43736 49 + 4899514 AAACCAGATTGGCCATGGATAGATGGTGATGAAGTGAGAAACACTTCAG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 42463 49 + 97742 AAACCAGATTGGCCATGGATAGATGGTGATGAAGTGAGAAACACTTCAG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3692189 49 - 108555830 AAACCAGATTGGCAGTGAATAGATGGTGATGAAGTGAGAAACACTTCAG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 42795 49 + 85016 AAACCAGATTGGCCATGGATAGATGGTGATGAAGTGAGAAACACTTCAG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1013092 49 - 1267912 AAACCAGATTGGCCATGGATAGATGGTGATGAAGTGAGAAACACTTCAG i colAng1.NW_012116822v1 C 0 C 0 s cebCap1.NW_016107581v1 4402490 49 + 4432243 AAACCAGAATGGCAGTGAATAGGTGGTGACAAAGTTAGAAACACTTCAG i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2495491 49 + 12154212 AAACCAGAATGGCAGTGAATAGGTGGTGACAAAGTGAGAAACACTTCAG i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19619254 43 - 27850971 AAACCAGATTGGCAGTGAGTAGGTGGTAATAAAATGAGAAACA------ i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1686519 49 - 2296528 AAACAAGATTGTCATTGAACAGGCAGTGTTTAAATGGGCAACAAGACAG i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46458901 1769 - 47448759 M e saiBol1.JH378197 4382 1174 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=2347809.000000 s hg38.chr3_KI270784v1_alt 155917 294 + 184404 CAAATGATCGAACGAATTAGTGACTGACTTATTA-CCCATCCTGGCAAAAACAGCCACTT------AGCCAAGAGTCCAAACTCTCCTCTCAAATCTAGAATGTCTTGGTGGGAAGGTAGGAGATAAGGAGCTTATAAATAGCAAAATCAAGTGGGATTTCGAGTTTACTTGTCCCTGTTCTACCCATAGCCAGGAAAATTAACTGGAG-TGTTAATAAATAACTCTATCTCATACTCTTTTCTCTTTTTGGCCACATCCCAAGCTGATAAAGGATATTGGTGGTGTGGGTGAGTGATGAAA s panTro5.chr3 48916 294 - 202621043 CAAATGATCGAACGAATTAGTGACTGACTTATTA-CCCATCCTGGCAAAAACAGCCACTT------AGCTAAGAGTCCAAACTCTCCTCTCAAATCTAGAATGTCTTGGTGGGAAGGTGGGAGTTAAGGAGCTTATAAATAGCAAAATCAAGTGGGATTTTGAGTTTACTTGTCCCTGTTCTACCCATACCCAGGAAAATTAACTGGAG-TGTTAATAAATAACTCTATCTCATACTCTTTTCTCTTTTTGGCCACATCCCAAGCTGATAAAGGATATTGGTGGTGTGGGTGAGTGATGAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 43868 294 - 205426864 GAAATGATCGAACGAATTAGTGACTGACTTATTA-CCCATCCTGGCAAAAACAGCCACTT------AGCTAAGAGTCCAAACTCTCCTCTCAAATCTAGAATGTCTTGGTGGGAAGGTGGGAGTTAAGGAGCTTATAAATAGCAAAATCAAGTGGGATTTTGAGTTTACTTGTCCCTGTTCTACCCATACCCAGGAAAATTAACTGGAG-TGTTAATAAACAACTCTATCTCATACTCTTTTCTCTTTTTGGCCACATCCCAAGCTGATAAAGGATATTGGTGGTGTGGGTGAGTGATGAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 62433 289 + 508821 CAAATGATCGAACGAATTAGTGACTGACTTATTA-CCCATCCTGGCAAAAACAGCCACTT------AGTTAAGAGTCCAAA--CTCCTCTCAAATCTAGAATGTCTTGGTGGGAAGGTGGGAGATAAGGAGCTTATAAATAGCAAAATCAAGTGGGATTTTGAGTTTACTTGTCCCTGTTCTACCCATACCCAGGAAAATTAACTGGAG-TGTTAATAAATAACTC--TCTCATACTCTTTTCTC-TTTTGGCCGCATCCCAAGCTGATAAAGGATATTGGTGGTGTGGGTCAGTGATGAAA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 27214 294 - 85730 CAAAGGATGGAACAAATTAGTGACTGACTTATTA-CCCATCCTAGCAAAAACAGCCACTT------ATCTAAGAGTCTAAGCTCTCCTCTCAAATCTAGAATGTCTTGGTGGGAAGGTGGGAGATAAGGAACTTATAAATAGCTAAATCAAGTGGGATTTTGAGTTTACTTGTCCCTGTTCTACCCATACCCAGGAAAATTAACTGGAG-TGTTAATAAATAACTCTATCTCATACTCTTTTCTCTTTTTGGCCACATCTCAAGCTGATAAAGGATATTGACGGTGTGGGTGAGTGATGAAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 47534 294 - 181584905 CAAAGGATGGAACAAATTAGTGACTGACTTATTA-CCCATCCTAGCAAAAACAGCCACTT------ATCTAAGAGTCTAAGCTCTCCTCTCAAATCTAGAATGTCTTGGTGGGAAGGTGGGAGATAAGGAACTTATAAATAGCTAAATCAAGTGGGATTTTGAGTTTACTTGTCCCTGTTCTACCCATACCCAGGAAAATTAACTGGAG-TGTTAATAAATAACTCTATCTCATACTCTTTTCTCTTTTTGGCCACATCTCAAGCTGATAAAGGATATTGACGGTGTGGGTGAGTGATGAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 43785 294 + 4899514 CAAAGGATGGAACAAATTAGTGACTGACTTATTA-CCCATCCTAGCAAAAACAGCCACTT------ATCTAAGAGTCTAAGCTCTCCTCTCAAATCTAGAATGTCTTGGTGGGAAGGTGGGAGATAAGGAACTTATAAATAGCTAAATCAAGTGGGATTTTGAGTTTACTTATCCCTGTTCTACCCATACCCAGGAAAATTAACTGGAG-TGTTAATAAATAACTCTATCTCATACTCTTTTCTCTTTTTGGCCACATCTCAAGCTGATAAAGGATATTGACGGTGTGGGTGAGTGATGAAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 42512 294 + 97742 CAAAGGATGGAACAAATTAGTGACTGACTTACTA-CCCATCCTAGCAAAAACAGCCACTT------AGTTAAGAGTCTAAGCTCTCCTCTGAAATCTAGAATGTCTTGGTGGGAAGGTAGGAGATAAGGAACTTATAAATAGCTAAATCAAGTGGGATTTTGAGTTTACTTGTCCCTGTTCTAGCCATACCCAGGAAAATTAACTGGAG-TGTTAATAAATAACTCTATCTCATACTCTTTTCTCTTTTTGGCCACATCTCAAGCTGATAAAGGATATTGACGGTGTGGGTGAGTGATGAAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3692238 285 - 108555830 CAAAGGGTGGAACAAATTAGTAACTGAC-TATTA-CCCATCCTGGCAAAAACAGCCACTT------AGATAAGAGTCTAAACTCTC-----AAATCTAGAGTATCTTGGTGGGAAGGTGGGAGATAAGGAACTTATAAATAGCAAAATCAACTGGGATTTTGAGTTTACTTGTCCCTGTTATACCCACACCCAGGAAAATTAACTGGAG-TTTTAATAAAAAACTGTATCTCATACTC--TTCTCTTTCTGGCCACATCCCAA-CTGATAAAGGATACTGGCCGTGTGGGTGAGAGATGAAA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 42844 294 + 85016 CAAAGGATGGAACAAATTAGTGACTGACTTACTA-CCCATCCTAGCAAAAACAGCCACTT------AGCTAAGAGTCTAAGCTCTCCTCTGAAATCTAGAATGTCTTGGTGGGAAGGTGGGAGATAAGGAACTTATAAATAGCTAAATCAAGTGGGATTTTGAGTTTACTTGTCCCTGTTCTAGCCATACCCAGGAAAATTAACTGGAG-TGTTAATAAATAACTCTATCTCATACTCTTTTCTCTTTTTGGCCACATCTCAAGCTGATAAAGGATATTGACGGTGTGGGTGAGTGATGAAA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1013141 292 - 1267912 CAAAGAATGGAACAAATTAGTGACTGACTTATCA-CCCATCGTAGCAAAAACAGCCACTT------AGCTAAGAGTCTAAGCTTACCTCTCAAACCTAGAATGTCTTGGTGGGAAGGTGGGAGATAAGGAGCTTATAAATAGCTAAATCAAGTGGGATTTTGAGTTTACTTGTCCCTGTTCTACCCATACCCAGGAAAATTAACTGAAG-TGTTAATAAATAAC--TATCTCATACTCTTTTCTCTTTTTGGCCACATCTCAAGCTGATAAAGGATATTGACGGTGTGGGTGAGTGATGAAA i colAng1.NW_012116822v1 C 0 I 7640 s saiBol1.JH378197 5575 257 + 8899380 CAAAGGGTGGAACAAATTAGTAATTGACTTATTA-CCCATCCTGGCAGAAACAGCCACTTGGAAAAGAATTGG---------TCTCCTTTCAAATTTGGAATGTCTTGGTGGGAAGGTGGGAAATAAGGAGCTTATAAATAGCAAAATCAAGTGGGATTTTGAGTTTACGTGTCCCTGTTCTACCCATACCCAGGAAAATT-----------------------------------TCTTTTCTCTTTTTGGCCACATCCCAAACTGATACAGGGTTTTGGCTGTTTGGGTGAGCAATGAAA i saiBol1.JH378197 M 1174 C 0 s cebCap1.NW_016107581v1 4402539 277 + 4432243 CAAAGGGTGAAACAAATTAGTAATTGTATTATTG-CCCATCCTAGCAGAAACAGCCACTT------AAATAAG---------TCTCCTCTCAAATTT-GAATGTCTTGGTGGGAAGGTGGGAGATAAGGATCTTATAAATAGCAAAATCAAGTGAGATTTTGAGTTTGTGTGTCCCTGTTCTACCCATACCCAGGAAAATTAACTGAAG-TTTTAATACATGACTCT------TACTCTTTTCTCTTTTTGTCCACATCCCAAACTGGTA-AGACTATTGGCTGTGTGGGTGAGCGATGAAA i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2495540 277 + 12154212 CAAAGGGTGAAACAAATTAGTAATTGTATTATTA-CCCATCCTAGCAGAAACAGCCACTT------AGGTAAG---------TCTCCTCTCAAATTT-GAATGTCTTGGTGGGAAGGTGGGAGATAAGGATCTTATAAATAGCAAAATCAAGTGAGATTTTGAGTTTGTGTGTCCCTGTTCTACCCATACCCAGGAAAATTAACTGAAG-TTTTAATAAATGACTCT------TACTCTTTTCTCTTTTTGGCCACATTCCAAACTGATA-AGACTATTGGCTGTGTGGGTGAGCAATGAAA i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19619297 293 - 27850971 -AGAGGGAAGAACAAATAATTAACTGACTTATTATCCTATTCTGGCAGAAATAGCCATTT------ACATAAGAGTCTAAACTCTGCTGTCAAATATCAAATGTCTTGATGGGAATGTGGGAGATAAGGAACTTGTAAGTAGCAAAATAAAGCTGATGTTTGAATTTAC-TATCCCCATCCTCCCCCTTCCCTAGAAAATTAAGTGGAGCTTTTAATAAATGACTCCATTTCTTACTTTTTCCTCTTTTTGGCTAAATCCACAAATGATAAAGGGAATTGGTGATTT-AGTGAGATACGAGA i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1686568 286 - 2296528 -------AAGAACAAATAATTAACTGACATATTATCCTATACTGGGAGAAACAGCCACTT------AGATAAGAGTCTAAGCTCTGTGCTTAAGTCTAGAATATCTTGCT-GGAAGTTGGGATGAAATGAATTTATTGATTATGAAATTAAGGTGCAGTTTGAATTCACTAGTCTCTGTTTTACCTGTACCCAGGAAAATTAAATGCAGTTTTTAGTATGTGACTTTATTTCTTATTCTTTCCT--TTTTGATCAGATATACAAATGATGAAGGGAATTGGCTGTATGGGTGAGAGATGAGA i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46458901 1769 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=72978.000000 s hg38.chr3_KI270784v1_alt 156211 10 + 184404 GTGAAGTGAT s panTro5.chr3 49210 10 - 202621043 GTGAAGTGAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 44162 10 - 205426864 GTGAAGTGAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 62722 10 + 508821 GTGAAGTGAT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 27508 10 - 85730 CTGAAGTGAT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 47828 10 - 181584905 CTGAAGTGAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 44079 10 + 4899514 CTGAAGTGAT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 42806 10 + 97742 CTGAAGTGAT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3692523 10 - 108555830 CGGAAGTGAT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 43138 10 + 85016 CTGAAGTGAT i manLeu1.NW_012101680v1 C 0 C 0 s saiBol1.JH378197 5832 10 + 8899380 CCGAAGTGAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4402816 10 + 4432243 CTGAATTGAT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2495817 10 + 12154212 CTGAATTGAT i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19619590 10 - 27850971 CTGAAGTGAT i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1686854 10 - 2296528 CTGAAGGAAT i dasNov3.JH570393 C 0 I 9 e calJac3.chr18 46458901 1769 - 47448759 M e colAng1.NW_012116822v1 1013433 7640 - 1267912 I e nomLeu3.chr11 155835 49227 - 123690457 I a score=214119.000000 s hg38.chr3_KI270784v1_alt 156221 57 + 184404 TGTAGTAATTCTCAGCAGTAGTAATTCTCTGc---agtaattctcagctagaattgtgca s panTro5.chr3 49220 57 - 202621043 TGTAGTAATTCTCAGCAGTAGTAATTCTCTGc---agtaattctcagctagaattgtgca i panTro5.chr3 C 0 C 0 s panPan2.chr3 44172 57 - 205426864 TGTAGTAATTCTCAGCAGTAGTAATTCTCTGc---agtaattctcagctagaattgtgca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 62732 57 + 508821 TGTAGTAATTCTCAGCAGTAGTAATTCTCTGc---agtaattctcagctagaattgtgca i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 27518 35 - 85730 TG----------------------TCTACTGc---agtaattctcagctagaattgtgca i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 47838 35 - 181584905 TG----------------------TCTACTGc---agtaattctcagctagaattgtgca i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 44089 35 + 4899514 TG----------------------TCTACTGc---agtaattctcagctagaattgtgca i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 42816 35 + 97742 TG----------------------TCTACTGc---agtaattctcagctagaattgtgca i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3692533 35 - 108555830 TG----------------------TCTGCTGc---agtaattctcagctagaattgtgca i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 43148 35 + 85016 TG----------------------TCTACTGc---agtaattctcagctagaattgtgca i manLeu1.NW_012101680v1 C 0 C 0 s saiBol1.JH378197 5842 38 + 8899380 TG----------------------TCAGCTGCACTACTAATTCTCAGCTAGAATTGTGCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4402826 35 + 4432243 TG----------------------TCTGCTGC---ATTAATTCTCAGCTAGAATTGTGCA i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2495827 35 + 12154212 TG----------------------TCTGCTGc---attagttctcagctagaattgtgca i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19619600 35 - 27850971 TG----------------------TGTACCAc---actagttgtcaagtagaattgtaca i otoGar3.GL873538 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e calJac3.chr18 46458901 1769 - 47448759 M e colAng1.NW_012116822v1 1013433 7640 - 1267912 I e nomLeu3.chr11 155835 49227 - 123690457 I a score=1683565.000000 s hg38.chr3_KI270784v1_alt 156278 222 + 184404 ttacagtgacctgggggaatt-----ttgttaaaagtgtacaaatgtaggctttcccctgaagattttgatgtaactgagctaataag-gtctgaacaggtatggttaaaaATA------TTTTCTTGAAgccgcacacagtggtttgtttctgtagtcccagctactcaggaggctgaggtgggaggattgt----ttgagcctaggagtttgagtccagcctgagaaacatagt-aa s panTro5.chr3 49277 223 - 202621043 ttacagtgacctgggggaatt-----ttgttaaaagtgtacaaatgtaggctttcccctgaagattttgatgtaactgagctaataag-gtctgaacaggtatggttaaaaATA------TTTTCTTGAAgccacacacagtggtttgtttctgtagtcccagctactcaggaggctgaggtgggaggattgt----ttgagcctaggagtttgagtccagcctgagaaacatagttaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 44229 222 - 205426864 ttacagtgacctgggggaatt-----ttgttaaaagtgtacaaatgtaggctttcccctgaagattttgatgtaactgagctaataag-gtctgaacaggtatggttaaaaATA------TTTTCTTGAAgccacacacagtggtttgtttctgtagtcccagctactcaggaggctgaggtgggaggattgt----ttgagcctaggagtttgagtccagcctgagaaacatagt-aa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 62789 222 + 508821 ttatagtgacctgggggaatt-----ttgttaaaagtgtacaaatgtaggctttcccctgaagattttgatgtaaccgagctaataag-gtctgaacaggtatggttaaaaATA------TTTTCTTGAAgccacacacagtggtttgtttctgtagtcccagctactcaggaggctgaggtgggaggattgt----ttgagcctaggagtttgggtccagcctgagaaacatagt-aa i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 27553 222 - 85730 ttacagtgacctgggggaatt-----ttgttaaaagtctacatatgtaggctttcccctgaagattttgatgtaactgagctaataag-gtctgaaaatgtatggttaaaaATA------TTTTCTTGAAgccacacacagtggcatgtttctatagtcccagctactcaggaggctgaggtgggaggattgt----ttgagcctaggagttTGAGTCCAGCCTGAGAAACACAGT-AA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 47873 222 - 181584905 ttacagtgacctgggggaatt-----ttgttaaaagtctacatatgtaggctttcccctgaagattttgatgtaactgagctaataag-gtctgaaaatgtatggttaaaaATA------TTTTCTTGAAgccacacacagtggcatgtttctatagtcccagctactcaggaggctgaggtgggaggattgt----ttgagcctaggagtttgagtccagcctgagaaacacagt-aa i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 44124 222 + 4899514 ttacagtgacctgggggaatt-----ttgttaaaagtctacatatgtaggctttcccctgaagattttgatgtaactgagctaataag-gtctgaaaatgtatggttaaaaATA------TTTTCTTGAAgccacacacagtggcatgtttctatagtcccagctactcaggaggctgaggtgggaggattgt----ttgagcctaggagtttgagtccagcctgagaaacacagt-aa i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 42851 222 + 97742 ttacagtgacctgggggaatt-----ttgttaaaagtctacatatgtaggctttcccctgaagattttgatgtaactgagctaataag-gtctgaaaatGTATGGTTAAAAATA------TTTTCTTGAAgccacacacagtggcatgtttctatagtcccagctactcaggaggttgaggtgggaggattgt----ttgagcctaggagtttgagtccagcctgagaaacacagt-aa i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3692568 222 - 108555830 ttacagtgacctggggaaatt-----ttgttaaaaatctacaagtgtaggctttcccctgaggtttttgatgtaatagatctAATAAG-TTCTGAACATGTATGGTTAATAATA------TTTTCTTGAAGTCATAcacaatggcatgtacctgtagtcccagctactcaggaggctgaggtgggaggattgc----ttcagcccaggagttTGAGTCCAGCCTGAGAAACATAGT-AA i chlSab2.chr12 C 0 I 353 s manLeu1.NW_012101680v1 43183 222 + 85016 ttacagtgacctgggggaatt-----ttgttaaaagtctacatatgtaggctttcccctgaagattttgatgtaactgagctaataag-gtctgaaaatgtatggttaaaaATA------TTTTCTTGAAgccacacacagtggcatgtttctatagtcccagctactcaggaggttgaggtgggaggattgt----ttgagcctaggagtttgagtccagcctgagaaacacagt-aa i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1021073 222 - 1267912 ttacagTGACCTGGGGGAATT-----TTGTTAAAAGTCTACATATGTAGGCTTTCCCCAGAAGATTTTGATGTAACTGAGCTAATAAG-GTCTGAAAATGTATGGTTAAAAATA------TTTTCTTGAAgccacacacagtggcatgtttctatagtcccagctactcagggggctgtggtgggaggattgt----ttgagcctaggagtttgagtccagcctgagaaacatagt-aa i colAng1.NW_012116822v1 I 7640 C 0 s saiBol1.JH378197 5880 223 + 8899380 CTACAGGGACCTATGGAAATT-----TTGTAAAAACTCTACAAGTATAAGCTTTCTCTTGAAGATTTTGATGTAATAGCTCTAATAAG-GCCTGAACATATATGGTTAAAAATA-------TTTTTTGAAGTCATTCACAGTTACATGTTTC--Cagtcccagctacttaggagtctgagctgagaggattgattggttgacgctaggactttgggtccagcttgcgcaacattgc-ga i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4402861 217 + 4432243 TTACAGGGACCAGGGGAAATT-----TTGTAAAAACTCTACAAGTGTAGGCTTTCTGTTGAAGATTTTGATGTAATAGATCTAATAAG-GCCTGAACATATATGGTTAAAAATA--------TTTTTGAAGCCATTcacagtggcttgttcc--ctgtcccagctacttaggaggctgaggtgagaggatcgc----ttgatgctaggattttgagtcaagcctgagcaa-atagt-ga i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2495862 217 + 12154212 ttacagggacctggggaaatt-----ttgtaaaaactctacaagtgtaggctttctcttgaagattttgatgtaatagatctaataag-gcctgagcatgtatgattaaaaATA--------TTTTTGAAGCCATTcacagtggcatgttcc--cagtcccagctacttaggaggctgaggtgagaggatttc----ttgatgctaggattttgagtccagcctgagcaa-atagt-ga i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19619635 233 - 27850971 tcatactgacctggggaaattaacagcataaaaaaatttacaaatctagaccctcctctgaagattttgatttaatgtgtctaataagagtctagacaagtatatttaaaaATATTAATCTTTCCTCAAAgctgggcataatggcatgtacttatagtcccagctactcaggaagctgagttgggaggattga----ctgagcccaggagttcgaCTCTAGCTTTA-CAACATAAT-GA i otoGar3.GL873538 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e calJac3.chr18 46458901 1769 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=26481.000000 s hg38.chr3_KI270784v1_alt 156500 3 + 184404 gac s panTro5.chr3 49500 3 - 202621043 gac i panTro5.chr3 C 0 C 0 s panPan2.chr3 44451 3 - 205426864 gac i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 63011 3 + 508821 gac i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 27775 3 - 85730 GAC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 48095 3 - 181584905 gac i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 44346 3 + 4899514 gac i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 43073 3 + 97742 gac i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 43405 3 + 85016 gac i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1021295 3 - 1267912 gac i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 6103 3 + 8899380 gac i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4403078 3 + 4432243 gac i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2496079 3 + 12154212 gac i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19619868 3 - 27850971 GAC i otoGar3.GL873538 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e calJac3.chr18 46458901 1769 - 47448759 M e chlSab2.chr12 3692790 353 - 108555830 I e nomLeu3.chr11 155835 49227 - 123690457 I a score=807847.000000 s hg38.chr3_KI270784v1_alt 156503 126 + 184404 tcttgtctcttacaacaacaacaga-----------------aaaaaaaAA------------------------CACCTCAGGGTTTGAATACACTCCTGATTG-----------AGAACCACAGAGTAGGTAAGTGCAGTATATA--AATTCCC-GTATCTCAAAAACATAAGAAATCT s panTro5.chr3 49503 127 - 202621043 tcttgtctcttacaacaacaacaga-----------------aaaaaaaaa-----------------------aCACCTCAGGGTTTGAATACACTCCTGATTG-----------AGAACCACAGAATAGGTAAGTGCAGTATATA--AATTCCC-GTATCTCAAAAACATAAGAAATCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 44454 125 - 205426864 tcttgtctcttacaacaacaacaga-----------------aaaaaaaA-------------------------CACCTCAGGGTTTGAATACACTCCTGATTG-----------AGAACCACAGAATAGGTAAGTGCAGTATATA--AATTCCC-GTATCTCAAAAACATAAGAAATCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 63014 129 + 508821 tcttgtctcttacaacaacaacaga-----------------aaaaaaaaa---------------------aAACACCTCAGGGTTTGAATACACTCCTGATTA-----------AGAACCACAGAATAGGTAAGTGCAGTATTTA--AATTCCC-GTGTCTCAAAAACATAAGAAATCT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 27778 154 - 85730 TCTTTTCTCTTACAACAGCAACAGC------------AAAaaaaaaaaaaaaaagaaaaaaag-aaaaaaagaaaTACCTCAGGGTTTGAATACACTCCTGATTA-----------AGAACCACAGAATAGATAAGTGCAGTATGTA--AATTCCC-GTATCTCAAAAACATAAGAAATCT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 48098 153 - 181584905 tcttttctcttacaacagccacagc-------------aaaaaaaaaaaaaaaagaaaaaaag-aaaaaaagaaaTACCTCAGGGTTTGAATACACTCCTGATTA-----------AGAACCACAGAATAGATAAGTGCAGTATATA--AATTCCC-GTATCTCAAAAACATAAGAAATCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 44349 166 + 4899514 tcTTTTCTCTTACAACAGCCACAGCaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaaaaag-gaaaaaagaaaTACCTCAGGGTTTGAATACACTCCTGATTA-----------AGAACCACAGAATAGATAAGTGCAGTATATA--AATTCCC-GTATCTCAAAAACATAAGAAATCT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 43076 160 + 97742 tcttttctcttacaacagcaacagc-------aaaaaaaaaaaaaagaaaaaaagaaaaaaagaaaaaaaagaaaTACCTCAGGGTTTGAATACACTCCTGATTA-----------AGAACCACGGAATAGATAAGTACAGTATATA--AATTCCC-GTATCTCAGAAACATAAGAAATCT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3693143 126 - 108555830 TCTTGTCTCTTACAACAACAAGAGC-----------------AAAAAC------------------------AAATACCTCAGCATTCGAATACACTCCTGATTA-----------AGAAGCACAGAATAGATAAGTGCAGTATATA--AATTCCC-ATATCTTAAAGACATAAGAAATCT i chlSab2.chr12 I 353 C 0 s manLeu1.NW_012101680v1 43408 150 + 85016 tcttttctcttacaacagcaacagc-----------------aaaaaaaaaaaagaaaaaaagaaaaaaaagaaataCCTCAGGGTTTGAATACACTCCTGATTA-----------AGAACCACGGAATAGATAAGTACAGTATATA--AATTCCC-GTATCTCAGAAACATAAGAAATCT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1021298 150 - 1267912 tcttttctcttacaacaaCAACAGC-----------------AAaaaaaagaaaaaaaaaaaaagaaaaaagaaaTACCTCAGGGTTTGAATACACTCCTGATTA-----------AGAACCACAGAATAGGTAAGTGCAGTATATA--AATTCCC-GTATCTCAAAAACATAAGAAATCT i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 6106 122 + 8899380 tcttgtctaa---aaCAACAACAGC-----------------AAAA--------------------------AAATATGTCTAGGTTTGAATACACTCCTAATTA-----------AGTATCACAGAAGAGATGAGTGCAGTGTATA--AATTATTCATATCTTAAAACCGTAAGAAATCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4403081 134 + 4432243 tcttgtctct---aacaacaacagc-----------------aaaa-------------ACAAACAAACAAGAAACACCTCTAGGTTTGAATATACCCCTGATTA-----------AGAACCACAGAATAGATGAGTGCAGTGTATA--AATTCCT-ATATCTCAAAACCATAAGAAATCT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2496082 134 + 12154212 ttttgtctct---aacaacaacagc-----------------aaaaacaaa-----caaacaaacaaacaaaaaaTTCCTCTAGGTTTGAATACACTCCTGATTA-----------AGAACGACAGAATAGATGAGTGCAGTGTATG----------AT-TCTCCAAATCATAAGAAATCT i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19619871 133 - 27850971 -CTAGTCTTT---AACACCAACAAG-----------------AAAAAAAGT--------------------------TTTTGATATTCTAATGCAGTCCTGGTTAATGCATTCCTCAGTACTACTGAGAAGATACGTGTAATATATATGCATTCCC-ATATCTTAAAATCAACaaatattt i otoGar3.GL873538 C 0 I 670 e dasNov3.JH570393 1686864 9 - 2296528 I e calJac3.chr18 46458901 1769 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=9100.000000 s hg38.chr3_KI270784v1_alt 156629 1 + 184404 C s panTro5.chr3 49630 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chr3 44579 1 - 205426864 C i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 63143 1 + 508821 C i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 27932 1 - 85730 C i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 48251 1 - 181584905 C i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 44515 1 + 4899514 C i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 43236 1 + 97742 C i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3693269 1 - 108555830 C i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 43558 1 + 85016 C i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1021448 1 - 1267912 C i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 6228 1 + 8899380 C i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4403215 1 + 4432243 C i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2496216 1 + 12154212 C i aotNan1.NW_018507789v1 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e otoGar3.GL873538 19620004 670 - 27850971 I e calJac3.chr18 46458901 1769 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=1891473.000000 s hg38.chr3_KI270784v1_alt 156630 247 + 184404 TAAAAGAGTTGGCATTTGATAGGTGCTACTTTCTTCAAAGTTCTCCTTTCCAATAAT-GTTAGCCTGAC--TTA----TCTTTCTCTACATTTGTGACTGGAAAGTAAAAGGAAATATTGCTGGCAATATATC--TCAGCTTACAGAAACACA-CCTTTT-CCTTCCCACCAGGAATCATTCACTGCCATTCAGAGAGCCTTTAGCAATTTGCTTGTGGGTAATCTTTCAATAGGTAAAGCCTGACCCTTTCACAATT s panTro5.chr3 49631 247 - 202621043 TAAAAGAGTTGGCATTTGATAGGTGCTACTTTCTTCAAAGTTCTCCTTTCCAATAAT-GTTAGCCTGAC--TTA----TCTTTCTCTACATTTGTGACTGGAAAGTAAAAGGAAATATTGCTGGCAATATATC--TCAGCTTACAGAAATACA-CCTTTT-CCTTCCCACCAGGAATCATTCACTGCCATTCAGAGAGCCTTTAGCAATTTGCTTGTGGGTAATCTTTCAATAGGTAAAGCCTGACCCTTTCACAATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 44580 247 - 205426864 TAAAAGAGTTGGCATTTGATAGGTGCTACTTTCTTCAAAGTTCTCCTTTCCAATAAT-GTTAGCCTGAC--TTA----TCTTTCTCTACATTTGTGACTGGAAAGTAAAAGGAAATATTGCTGGCAATATATC--TCAGCTTACAGAAATACA-CCTTTT-CCTTCCCACCAGGAATCATTCACTGCCATTCAGAGAGCCTTTAGCAATTTGCTTGTGGGTAATCTTTCAATAGGTAAAGCCTGACCCTTTCACAATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 63144 247 + 508821 TAAAAGAGTTGGCATTTGATAGGTGCTACTTTCTTCAAAGTTCTCCTTTCCAATAAT-GTTAGCCTGAC--TTA----TCTTTCTCTACATTTGTGACTGGAAAGTAAAAGGAAATATTGTTGGCAATATATC--TCAGCTTACAGAAATACA-CCTTTT-CCTTCCCACCAGGAATCATTCACTGCCATTCAGAGAGCCTTTAGCAATTTGCTTGTGGGTAATCTTTCAATAGGTAAAGGCTGACCCTTTCACAATT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 27933 251 - 85730 TAAAAGAGTTGGCATTTGATAGGTGCTACTTTCTTCACAGTTCTCCTTTCCAATAAT-GTTAGCCTGAC--TTATCTGTCTTTCTCTGCGTTTGTGACTAGAAAGTGAAAGAAAATATTGTTGGCAATATCTC--TCAGCTTACAGAATAACA-CCTTTT-CCTTACCACCATGAATCATTCACTGCTGTTCAGAGAGTCTTTAGCAATTTTCTTGTGGGTAGTCTTTCAACAGGTAAAGGCTGACCCTTTCACAATT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 48252 251 - 181584905 TAAAAGAGTTGGCATTTGATAGGTGCTACTTTCTTCACAGTTCTCCTTTCCAATAAT-GTTAGCCTGAC--TTATCTGTCTTTCTCTGCGTTTGTGACTAGAAAGTGAAAGAAAATATTGTTGGCAATATCTC--TCAGCTTACAGAATAACA-CCTTTT-CCTTCCCACCATGAATCATTCACTGCTGTTCAGAGAGTCTTTAGCAATTTTCTTGTGGGTAGTCTTTCAACAGGTAAAGGCTGACCCTTTCACAATT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 44516 251 + 4899514 TAAAAGAGTTGGCATTTGATAGGTGCTACTTTCTTCACAGTTCTCCTTTCCAATAAT-GTTAGCCTGAC--TTATCTGTCTTTCTCTGCGTTTGTGACTAGAAAGTGAAAGAAAATATTGTTGGCAATATCTC--TCAGCTTACAGAATAACA-CCTTTT-CCTTCCCACCATGAATCATTCATTGCTGTTCAGAGAGTCTTTAGCAATTTTCTTGTGGGTAGTCTTTCAACAGGTAAAGGCTGACCCTTTCACAATT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 43237 251 + 97742 TAAAAGAGTTGGCATTTGATAGGTGCTACTTTCTTCACAGTTCTCCTTTCCAATAAC-GTTAGCCTGAC--TTATCTGTCTTTCTCTGCGTTTGTGACTAGAAAGTAAAAGAAAATATTGTTGGCAATATCTC--TCAGCTTACAGAATAACA-CCTTTT-CCTTCCCACCATGAATCATTCACTGCTGTTCAGAGAGTCTTTAGCAATTTTCTTGTGGGTAGTCTTTCAACAGGTAAAGGCTGACCCTTTCACAATT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3693270 251 - 108555830 TAAAAGAGTTGGCATTTGATAGGTGCTACTTTCTTCAAAGTTCTCCTTTCCAATAAC-ATTAGCCTGAC--TTATCTGTCTTTCTCTATGTTCGTGACTGGGAAGTGAAAGGAAATATCATTGGCAACAGCTC--TCAGCTTACAGAATAACA-CTCTTT-CCTTCCCACCATGAATCATTCACTGCCATTCAGAGAGTCTTAAGCAATTTGCTTGTGGGTAATCTTTCAATAAGTAGAGGCTGACCCTTTCACAATT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 43559 251 + 85016 TAAAAGAGTTGGCATTTGATAGGTGCTACTTTCTTCACAGTTCTCCTTTCCAATAAC-GTTAGCCTGAC--TTATCTGTCTTTCTCTGCGTTTGTGACTAGAAAGTAAAAGAAAATATTGTTGGCAATATCTC--TCAGCTTATAGAATAACA-CTTTTT-CCTTCCCACCATGAATCATTCACTGCTGTTCAGAGAGTCTTTAGCAATTTTCTTGTGGGTAGTCTTTCAACAGGTAAAGGCTGACCCTTTCACAATT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1021449 251 - 1267912 TAAAAGAGTTGGCATTTGATAGGTGCTACTTTCTTCACAGTTGTCCTTTCCAATAAT-GTTAGCCTGAC--TTATCTGTCTTTCTCTACATTTGTGACTAGAAAGTAAAAGGAAATACTGTTGGCAGTATCTC--TCAGCTTACAGAATAACA-CCTTTT-CCTTCCCACCATGAATCATTCACTGCCGTTCACAGAGTCTTTAGCAATTTGCTTGTGGGTAATCTTTCAACAGGTAAAGGCTGACCCTTTCACAATT i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 6229 241 + 8899380 TAAAAG--TTGGCATTTGATAGGGATTACTTCCTTCAAAGTTTCCCTTTCCAATAATAATCAGCCTGAC--TTATCTTTC----TCTACATCTGTGACTGGGAATTGAAAGAAAATATTATTGGTAATATCTCTGTCAGCTTATCA--------CCGTTT-TGTTCTCACCATGAATCATTTACTACCATTCAGAGAATCTTTAGGAATTTGCTTGTGGGTGATCTTTCAATAAGTAGAGGCTGATCCTTTCACAATT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4403216 250 + 4432243 TAAAAGACTTGGCATTTGATAGGGGTTACTTCCTTCAAAGTTCTTCTTTCCGATAAT-ATTAGCCTGAC--TTATCTGTCTCTTTCTACGTCTGAGACTGGGAAGTGAAAGGAAATATTATGGGTAATATCCC--TCAGCTTACAGAATAACACCCTTTT-TCTTCTCATCATGAATTATTTACTGTCATTTAGAGAGCC--TAGAAATTTGCTTGTGGGTGATCTTTCAATAAGTAGAGGCAGTCCCTTTCACTATT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2496217 250 + 12154212 TAAAAGAGTTGGCATTTGATAGGGGTTACTTCCTTCAAAGTTCTTCTTTCCAATAAT-ATTAACCTGAT--TTATCTGTCTTTTTCTATGTCTGTGACTGGGAAGTGAAAGGAAATATTATGGGTAATATCTC--TCAGCTTATAGAATAACACCTTTTT-TCTTCTCATCATGAATTATTTACTGTGATTTAGAGAGTC--TAGGAATTTGCTTGTGGGTTATCTTTCAATAAGTAGAGGTGGATCCTTTCACTATT i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19620674 250 - 27850971 TAAAAGAGTTAGAGTTTAATATGTGCTACTTCCTTCAAGTATCTCCTTTCCAACAAT-ATTAGCCTGACTTTTATTTGTCTTTCTCTACCTTCGTGGCTGGGAAGTTAAAAGGACTATTATTGGCAGTATCTG--TCAGTTTAGAGA---ACA-CCTTTTACCTTCCAAACATCAGTCACTGACT-CCATTCAGAGGATCTTTAGAAATTTGCATATAGGTAGTCTTTCAGTGAATAGAGTCTGACCCTGTCAGCCTT i otoGar3.GL873538 I 670 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e calJac3.chr18 46458901 1769 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=592400.000000 s hg38.chr3_KI270784v1_alt 156877 80 + 184404 TCATGTTCCTTTGTCACCATTCAAGTGATTATGTGTC-AACAAATGTTCATTACAAGTGAAATTTTCTCAATTAGATTAGT s panTro5.chr3 49878 80 - 202621043 TCATGTTCCTTTGTCACCATTCAAGTGATTATGTGTC-AACAAATGTTCATTACAAGTGAAATTTTCTCAATTAGATTAGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 44827 80 - 205426864 TCATGTTCCTTTGTCACCATTCAAGTGATTATGTGTC-AACAAATGTTCATTACAAGTGAAATTTTCTCAATTAGATTAGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 63391 80 + 508821 TCATGTTCCTTTGTCACCCTTCAAGTGATTATGTGTC-AACAAATGTTCATTACAAGTGAAATTTTCTCAATTAGATTAGT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 28184 80 - 85730 TCATGTTCCTTTGTTACCATTCAAGTGATTATGTGTC-AACAAATGTTCATTACAAGTGAAATTTTCTCATTTAGATTAGT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 48503 80 - 181584905 TCATGTTCCTTTGTTACCATTCAAGTGATTATGTGTC-AACAAATGTTCATTACAAGTGAAATTTTCTCATTTAGATTAGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 44767 80 + 4899514 TCATGTTCCTTTGTTACCATTCAAGTGATTATGTGTC-AACAAATGTTCATTACAAGTGAAATTTTCTCATTTAGATTAGT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 43488 80 + 97742 TCATGTTCCTTTGTTACCATTCAAGTGATTATGTGTC-AACAAATGTTCATTACAAGTGAAATTTTCTCATTTAGATTAGT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3693521 80 - 108555830 TCATGTTCCTCTGTCACCATTCTAGTGATTATGTGTC-AACAAATGTTCATTACAAGTGAGATTTTCTCAATTAGATTAGT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 43810 80 + 85016 TCATGTTCCTTTGTTACCATTCAAGTGATTATGTGTC-AACAAATGTTCATTACAAGTGAAATTTTCTCATTTAGATTAGT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1021700 80 - 1267912 TCATGTTCCTTTGTCACCATTCAAGTGATTATGTGTC-AACAAATGTTCATTACAAGTGAAATTTTCTCATTTAGATTAGT i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 6470 80 + 8899380 TCATGTTTCTTTGTCACGGTTCAGGTGGTTATGCGTC-AAAAAATCTTCATTACAAGTGAGGTTTTCTCAATTAGATTTGT i saiBol1.JH378197 C 0 M 2177 s cebCap1.NW_016107581v1 4403466 81 + 4432243 TCATGTTCCATTGTCACGAGTCAGGTGATTATGTGTCAAAAAAATGATCATTACAAGTCAGGTTTTCTCAATTAGATAAGT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2496467 80 + 12154212 TCATGTTCCTTTGTCAGGAGTCAGGTGATTATGTGTC-AAAAAATGATCATTACAAGTGAGGTTTTCTCAATTAGATTAGT i aotNan1.NW_018507789v1 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e otoGar3.GL873538 19620924 0 - 27850971 C e calJac3.chr18 46458901 1769 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=1343275.000000 s hg38.chr3_KI270784v1_alt 156957 210 + 184404 AGCAAATCCTGAAC-CGTTTT--TTTTTTTTCAGTTGAAATTGTATTATGGACTATGTCAGTATGTCTGTTAAGTTTATAGAGCTTTGGCACAATCAGGATGTCAGTTTTAAACACTGAAATCCATGAAGTCGGTGAGAATACTATAGGAATTCTTTTAATAAGTTAGTTTCGGCAGTCTTATGATCTAATTATCTATTTGGTTAACAATCTG s panTro5.chr3 49958 207 - 202621043 AGCAAATCCTGAAC-C---TT--TTTTTTTTCAGTTGAAGTTGTATTATGGACTATCTCAGTATGTCTGTTAAGTTTATAGAGCTTTGGCACAATCAGGATGTCAGTTTTAAACACTGAAATCCATGAAGTCAGTGAGAATACTATAGGAATTCTTTTAATAAGTTAGTTTCAGCAGTCTTATGAGCTAATTATCTATTTGATTAACAATCTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 44907 207 - 205426864 AGCAAATCCTGAAC-C---TT--TTTTTTTTCAGTTGAAGTTGTATTATGGACTATCTCAGTATGTCTGTTAAGTTTATAGAGCTTTGGCACAATCAGGATGTCAGTTTTAAACACTGAAATCCATGAAGTCAGTGAGAATACTATAGGAATTCTTTTAATAAGTTAGTTTCAGCAGTCTTATGAGCTAATTATCTATTTGGTTAACAATCTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 63471 206 + 508821 AGCAAATCCTGAAC-C---TT--TTTTTTTTCAGTTGAAGTTGTATTATGGACTATCTCAGTATGTCTGTTAAGTTTATAGAGCTTTGGCACAATCAGGATGTCAGTTTTAAACACT-AAATCCATGAAGTCAGTGAGAATACTATAGGAATTCTTTTAATAAGTTAGTTTCAGCAGTCTTATGAGCTAATTATCTATTTGGTTAACAATCTG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 28264 206 - 85730 AGCAAATCCTGAAC-T----T--TTTTTTTTCATTTGAAGTTGTATTATGGACTATCTCAGTATGTCTGTTAAGTTTATGGAGCTTTGGCATAATCAGGATGTCAGTTTTAAACACTGAAATCCATGAAGTCAATGAGAATACTATAGGAATTCTTTTAATAAGTTCGTTTCAGCAGTCTTATGAACTAATTATCTATTTGGTTAACAATCTG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 48583 206 - 181584905 AGCAAATCCTGAAC-T----T--TTTTTTTTCATTTGAAGTTGTATTATGGACTATCTCAGTATGTCTGTTAAGTTTATGGAGCTTTGGCATAATCAGGATGTCAGTTTTAAACACTGAAATCCATGAAGTCAATGAGAATACTATAGGAATTCTTTTAATAAGTTCGTTTCAGCAGTCTTATGAACTAATTATCTATTTGGTTAACAATCTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 44847 207 + 4899514 AGCAAATCCTGAACTT----T--TTTTTTTTCATTTGAAGTTGCATTATGGACTATCTCAGTATGTCTGTTAAGTTTATGGAGCTTTGGCATAATCAGGATGTCAGTTTTAAACACTGAAATCCATGAAGTCAATGAGAATACTATAGGAATTCTTTTAATAAGTTCGTTTCAGCAGTCTTATGAACTAATTATCTATTTGGTTAACAATCTG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 43568 206 + 97742 AGCAAATCCTGAAC-C----T--TTTTTTTTCATTTGAAGTTGTATTATGGACTATCTCAGTATGTCTGTTAAGTTTATGGAGCTTTGGCATAATCAGGATGTCAGTTTTAAACACTGAAATCCATGAAGTCAATGAGAATACTATAGGAATTCTTTTAATAAGTTCGTTTCAGCAGTCTTATGAACTAATTATCTATTTGGTTAACAATCTG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3693601 210 - 108555830 AACAAATCCTGAAC-CTTTTT--TTTTTTTTCAGTTGAAGTTGTGTTAGGGACTATCTCAGTGTGTCTGTTAAGTTTATAGAGCTTTGGCATAATCAGGATGTCAGTTTTAAACACTGAAATTCTTGAAGTCAGTGAGAATACAATAGAAATTCTTTTAATAATTTAGTTTCAGCAGTCCTATGAACTAATTATCTATTTGGTTAACAATCTG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 43890 206 + 85016 AGCAAATCCTGAAC-C----T--TTTTTTTTCATTTGAAGTTGTATTATGGACTATCTCAGTATGTCTGTTAAGTTTATGGAGCTTTGGCATAATCAGGATGTCAGTTTTAAACACTGAAATCCATGAAGTCAATGAGAATACTATAGGAATTCTTTTAATAAGTTCGTTTCAGCAGTCTTATGAACTAATTATCTATTTGGTTAACAATCTG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1021780 206 - 1267912 AGCAAATCATGAAC-C----T--TTTTTTTTCATTTGAAGTTGTATTATGGACTATCTCAGTATGTCTGTTAAGTTTATGGAGCTTTGGCATAATCAAGACGTCAGTTTTAAACACTGAAATCCATGAAGTCAATGAGAATACTACATGAATTCTTTTAATAAGTTCATTTCAGCAGTCTTATGAACTAATTATCTATTTGGTTAACAATCTG i colAng1.NW_012116822v1 C 0 C 0 s cebCap1.NW_016107581v1 4403547 206 + 4432243 AGCAGTTTCTGAAC-T----C--TTTTTTTTCAGTTGAAGTTGTATTATGGACTATCTCAGTATGTCTGTTAAGTTTACAGAGCTTTGGCATAATCAGGATGTCAGTTTTAAACACTGAAACCCATTAAGTCAGTGAGAATACAATAGTAATTCTTTTAATAATTTAGTTTTAGCAGTCCTATGAACTAATTGTCTATTTGGTTAACAATCTG i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2496547 208 + 12154212 AGCAGTTTCTGAAC-T----CTTTTTTTTTTCAATTGAAGTTGTTTTATGGACTATCTCAGTATGTCTGTTAAGTTTACAGAGCTTTGGCATAATCAGGATGTCAGTTTTAAACACTGAAATCCATTAAGTCAGTGAGAATACAATAGGAATTCTTTTAATAATTTAGTTTTAGCAGTCCTATGAACTAATTATCTATTTGGTTAACAATCTG i aotNan1.NW_018507789v1 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e otoGar3.GL873538 19620924 0 - 27850971 C e calJac3.chr18 46458901 1769 - 47448759 M e saiBol1.JH378197 6550 2177 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=4246.000000 s hg38.chr3_KI270784v1_alt 157167 1 + 184404 G s panTro5.chr3 50165 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 45114 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 63677 1 + 508821 G i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 28470 1 - 85730 G i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 48789 1 - 181584905 G i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 45054 1 + 4899514 G i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 43774 1 + 97742 G i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3693811 1 - 108555830 G i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 44096 1 + 85016 G i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1021986 1 - 1267912 T i colAng1.NW_012116822v1 C 0 C 0 s aotNan1.NW_018507789v1 2496755 1 + 12154212 G i aotNan1.NW_018507789v1 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e otoGar3.GL873538 19620924 0 - 27850971 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e calJac3.chr18 46458901 1769 - 47448759 M e saiBol1.JH378197 6550 2177 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=2143497.000000 s hg38.chr3_KI270784v1_alt 157168 481 + 184404 GAAAATAATATACAAACAGATTTCAAATGAATAAATTTTGGGAAAATTCTTCAGGTGGGTATTATGAGTCTTAACAGCAATTTTT-----------------------------------------------------AT------TATATATATATCAGGGGCTGA---TTTTTATATAAAACACATGATACTAGAGACAGAAAAAGTTTCACATGCAAATACTTGGTTTATACAAAATCATTTAGT-ACACATTCATGGAAACTATAAATACACAAGGGCTATAGTCTAAC----TGTGGCACATAGATTTGTTCATTTGCCTCTTTAAGTTGAgttagcatgtgaaatttagtagactcatgcagaaatctggacctcaggcctgtcttaagaatcaaatctggtgtccccggaaccgcatcactgcttggtctgctgtgcagaggttgccctgtgtaggaggcacagattctccagttggcttctgtgcccacctgagtacttcacttacttaggtcatctcct-catccttataagtatttgag s panTro5.chr3 50166 481 - 202621043 GAAAATAATATACAAACAGATTTCAAATGAATAAATTTTGGGAAAATTCTTCAGGTGGGTATTATGAGTCTTAACAGCAATTTTT-----------------------------------------------------AT------TATATATATATCAGGGGCTGA---TTTTTATATAAAACACATGATACTAGAGACAGAAAAAGTTTCACATGCAAATACTTGGTTTATACAAAATCATTTAGT-ACACATTCATGGAAACTATAAATACACAAGGGCTATAGTCTAAC----TGTGGCACATAGATTTGTTCATTTGCCTCtttaaattgagttagcatgtaaaatttagtagactcatgcagaaatctggacctcaggcctgtcttaagaatcaaatctggtgtccccggaaccacatcactgcttggtctgctgtgcagaggttgccctgtgtaggaggcacatattctccagtttgctactgtgcccacctgagtacttcacttacttaggtaatctcct-catccttataagtatttgag i panTro5.chr3 C 0 C 0 s panPan2.chr3 45115 485 - 205426864 GAAAATAATATACAAACAGATTTCAAATGAATAAATTTTGGGAAAATTCTTCAGGTGGGTATTATGAGTCTTAACAGCAATTTTT-----------------------------------------------------ATTAT--ATATATATATATCAGGGGCTGA---TTTTTATATAAAACACATGATACTAGAGACAGAAAAAGTTTCACATGCAAATACTTGGTTTATACAAAATCATTTAGT-ACACATTCATGGAAACTATAAATACACAAGGGCTATAGTCTAAC----TGTGGCACATAGATTTGTTCATTTGCCTCtttaaattgagttagcatgtaaaatttagtagactcatgcagaaatctggacctcaggcctgtcttaagaatcaaatctggtgtccccggaaccacatcactgcttggtctgctgtgcagaggttgccctgtgtaggaggcacatattctccagtttgctactgtgcccacctgagtacttcacttacttaggtaatctcct-catccttataagtatttgag i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 63678 486 + 508821 GAAAATAATATACAAACAGATTTCAAATGAATAAATTTTGGGAAAATTCTTCAGGTGGGTATTATGAGTCTTAACAGCAATTTTT-----------------------------------------------------ATTTTTATTATATATATATT-GGGGCTGA---TTTTTATATAAAACACATGATACTAGAGACAGAAAAAGTTTCACATGCAAATACTTGGTTTATACAAAATCATTTAGT-ACACATTCATGGAAACTATAAATACACAAGGGCTATAGTCTAAC----TATGGCACATAGATTTGTTCATTTGCCtctttaaattgagttagcatgtaaaatttagtagactcatgcagaaatctggacctcaggcctgtcttaagaatcaaatctggtgtccccggaaccgcatcactgcttggtctgctgtgcagaggttgccctgtgtaggaggcacatattctccagtttgctgctgtgcccacctgagtacttcacttacttaggtaacctcct-catccttataagtatttgag i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 28471 489 - 85730 GAAAATGGTATACAAAC--ATTTCAAATGAATAAATTTTGGGAAAATTCTTAAGGTGGGTATTATGAGTCTTAACAACAACTTTTATT--------------------------------------------------TT-----ATATATATATATATCGGGCTGA---CTTTTATATAAAACATATGATACTAGAGAAAGAAAAAGTTTCACATGCAAATACTTGGTTTATACAAAGTCATTTAGTAACACATTCATAGAAAATATAAATACACAAAGGCTATAGTCTAACTAAATGTGGCACATAGATTTGTTTATTTGCCTCtttaaattgagtcaacatgtaaaatttagcagactcatgcaggaatctggacctcaggcttgtctcaagaatcaaatctggtgtcccccaaaccccatcactgcttggtctgctgtgcagaggttgccctgtgtaggaggcacatattctccagtttgccactgtgcccacctgagtacttcacttacctaggtaacctcctccatccttataagtatttgag i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 48790 489 - 181584905 GAAAATGGTATACAAAC--ATTTCAAATGAATAAATTTTGGGAAAATTCTTAAGGTGGGTATTATGAGTCTTAACAGCAACTTTtatt--------------------------------------------------at-----atatatatatatatCGGGCTGA---CTTTTATCTAAAACATATGATACTAGAGAAAGAAAAAGTTTCACATGCAAATACTTGGTTTATACAAAGTCATTTAGTAACACATTCATAGAAAATATAAATACACAAAGGCTATAGTCTAACTAAATGTGGCACATAGATTTGTTTATTTGCCtctttaaattgagtcaacatgtaaaatttagcagactcatgcaggaatctggacctcaggcttgtctcaagaatcaaatctggtgtcccccaaaccccatcactgcttggtctgctgtgcagaggttgccctgtgtaggaggcacatattctccagtttgccactgtgcccacctgagtacttcacttacctaggtaacctcctccatccttataagtatttgag i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 45055 539 + 4899514 GAAAATGGTATACAAAC--ATTTCAAATGAATAAATTTTGGGAAAATTCTTAAGGTGGGTATTATGAGTCTTAACAGCAACTTTTATTTtatatatatatatatgtatatatatacatatatatatgtatatatatacat-----atatatatatatatCGGGCTGA---CTTTTATATAAAACATATGATACTAGAGAAAGAAAAAGTTTCACATGCAAATACTTGGTTTATACAAAGTCATTTAGTAACACATTCATAGAAAATATAAATACACAAAGGCTATAGTCTAACTAAATGTGGCACATAGATTTGTTTATTTGCCTCtttaaattgagtcaacatgtaaaatttagcagactcatgcaggaatctggacctcaggcttgtctcaagaatcaaatctggtgtcccccaaaccccatcactgcttggtctgctgtgcagaggttgccctgtgtaggaggcacatattctccagtttgccactgtgcccacctgagtacttcacttacctaggtaacctcctccatccttataagtatttgag i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 43775 483 + 97742 GAAAATGGTATACAAACAGATTTCAAATGAATAAATTTTGGG-AAATTCTTAAGGTGGGTATTATGAGTCTTAACAGCAACTT-------------------------------------------------------TT-----ATATATATATATCAGGGGCTGA---TTTTTATATAAA--ATATGATACTAGAGAAAGAAAAAGTTTCACACGCAAATACTTGGTTTATACAAAGTCATTTAGTAACACATTCATAGAAAATATAAATACACAAAGGCTATAGTCTAACTAAATGTGGCACATATATTTGTTTATTTGCCtctttaaattgagtcaacatgtaaaatttagcagactcatgcaggaatctggacctcaggcttgtctcaagaatcaaatctggtgtcccccaaaccccatcactgcttggtctgctgtgcagaggttgccctgtgtaggaggcacatattctccagtttgccactgtgcccacctgagtacttcacttacctaggtaacctcctccatccttataagtatttgag i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3693812 478 - 108555830 GAAAATGATATACACATAGATTGCAAATGAATAAATGTTGGGAAAATTCTTGAGGTGGGTATTACGAGTCTTAACAGCAATTTTT-----------------------------------------------------AT------TATGTATATTTCAGGGCCTGAGTTTTTTTATTAAAC--ATATGATACTAGAGAAGGAAAAAGTTCCACATGCAAATACTTGGTTTATACACAATCATTTAGTAACACATTCATAGCAAATATAAAAACACAAGGGCTATAGT----CTACATGTGGCACATAGATTTGTTC-TTTGCCTCtttaaattgagtcaacatgtaaaatttagtaaactcatgcagaaatctggacctcaggctt-----aagaatcaaatctggtgtcccctgaactgcatcagtgcttggtctgctgtgcagaggttgccctgtgtaggagacacatattctccagtttgctactgtgcccacctgagtacttcacttacttaggtaacctccttcatccttacaagtatttgag i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 44097 485 + 85016 GAAAATGGTATACAAACAGATTTCAAATGAATAAATTTTGGG-AAATTCTTAAGGTGGGTATTATGAGTCTTAACAGCAACTTTT-----------------------------------------------------AT-----ATATATATATATCAGGGGCTGA---TTTTTATATAAA--ATATGATACTAGAGAAAGAAAAAGTTTCACACGCAAATACTTGGTTTATACAAAGTCATTTAGTAACACATTCATAGAAAATATAAATACACAAAGGCTATAGTCTAACTAAATGTGGCACATATATTTGTTTATTTGCCtctttaaattgagtcaacatgtaaaatttagcagactcatgcaggaatctggacctcaggcttgtctcaagaatcaaatctggtgtcccccaaaccccatcactgcttggtctgctgtgcagaggttgccctgtgtaggaggcacatattctccagtttgccactgtgcccacctgagtacttcacttacctaggtaacctcctccatccttataagtatttgag i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1021987 492 - 1267912 GAAAATGGTATACCAACAGATTTCAAATGAATAAATTTTGGGAAAATTCTTAAGGCGGGTATTATGAGTCTTTACAGCAACTTTtattt-------------------------------------------------at-----atatatatatatCAAGGGCTGA---TTTTTATATAAAACATATGATACTAGAGAAAGAAAAAGTTTCACATGCAAATACTTGGTTTATACAAAGTCATTTAGTAACACATTCATAGAAAATATAAATACACAAAGGCTATAGTCTAACTAAATGTGGCACATAGATTTTTTTATTTGCCtctttaaattgagtcaacatgtaaaatttagcagactcatgcagaaatctggacctcaggcttgtctcaagaatcaagtctggtgtcccctaaaccccatcactgcttggtctgccgtgcagaggttgccctgtgtaggaggcacatattctccagtttgccactgtgcccacctgagtacttcacttacctaggtaacctcctccgtccttataagtatttgag i colAng1.NW_012116822v1 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e otoGar3.GL873538 19620924 0 - 27850971 C e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e calJac3.chr18 46458901 1769 - 47448759 M e saiBol1.JH378197 6550 2177 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=42504.000000 s hg38.chr3_KI270784v1_alt 157649 8 + 184404 tttacaac s panTro5.chr3 50647 8 - 202621043 tttacaac i panTro5.chr3 C 0 C 0 s panPan2.chr3 45600 8 - 205426864 tttacaac i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64164 8 + 508821 tttacaac i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 28960 8 - 85730 tttacagc i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49279 8 - 181584905 tttacagc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 45594 8 + 4899514 tttacagc i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44258 8 + 97742 tttacagc i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3694290 8 - 108555830 tttacaac i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 44582 8 + 85016 tttacagc i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1022479 8 - 1267912 tttacagc i colAng1.NW_012116822v1 C 0 C 0 s canFam3.chr2 79069909 8 - 85426708 tttacaag i canFam3.chr2 N 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e otoGar3.GL873538 19620924 0 - 27850971 C e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e calJac3.chr18 46458901 1769 - 47448759 M e saiBol1.JH378197 6550 2177 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=335540.000000 s hg38.chr3_KI270784v1_alt 157657 61 + 184404 tcctgTTTTATAGTATATTTTCATAAAGATTTCAAGATTTTCAAGACAGTGTATATTGGTT s panTro5.chr3 50655 61 - 202621043 tcctgTTTTATAGTATATTTTCATAAAGATTTCAAGATTTTCAAGACAGTGTATATTGGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 45608 61 - 205426864 tcctgTTTTATAGTATATTTTCATAAAGATTTCAAGATTTTCAAGACAGTGTATATTGGTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64172 61 + 508821 tcctgTTTTATAGTATATTTTCATAAAGATTTCAAGATTTTCAAGACAGTGTATATTGGTT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 28968 60 - 85730 ttctgTTTTATATTATGTTTTCATAAAGATTTCAAGATTTTCAAGACGGTGTATATTGGT- i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49287 60 - 181584905 ttctgTTTTATATTATATTTTCATAAAGATTTCAAGATTTTCAAGACGGTGTATATTGGT- i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 45602 60 + 4899514 ttctgTTTTATATTATATTTTCATAAAGATTTCAAGATTTTCAAGACGGTGTATATTGGT- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44266 60 + 97742 ttctgTTTTATATTATATTTTCATAAAGATTTCAAGATTTTCAAGACAGTGTATATTGGT- i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3694298 61 - 108555830 tcctTTTTTATAGTATATTTTCATAAAGATATCAAGTTTTTCAAGATAGCATATATTGGTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 44590 60 + 85016 ttctgTTTTATATTATATTTTCATAAAGATTTCAAGATTTTCAAGACAGTGTATATTGGT- i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1022487 60 - 1267912 ttctgTTTTATATTGTATTTTCATAAAGATTTCAACATTTTCAAGACAGTGTATACTGGT- i colAng1.NW_012116822v1 C 0 C 0 s otoGar3.GL873538 19620924 61 - 27850971 TCCTATTTTATAGTATGTATTGAAAAGGATTTCAAGGTTTTCGAGATAGCTTATATTTGTT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79069917 61 - 85426708 tgttTGTTTATGGTATATGTTGATAAAGATTTCAAGATTTTCAGGATAATCCatattaatt i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e calJac3.chr18 46458901 1769 - 47448759 M e saiBol1.JH378197 6550 2177 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=120414.000000 s hg38.chr3_KI270784v1_alt 157718 21 + 184404 TATAATATATAGTCTATAGTT s panTro5.chr3 50716 21 - 202621043 TATAATATATAGTCTATAGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 45669 21 - 205426864 TATAATATATAGTCTATAGTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64233 21 + 508821 TATAATATATAGTCTATAGTT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 29028 16 - 85730 -----TATATAGTCTATAGTT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49347 16 - 181584905 -----TATATAGTCTATAGTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 45662 16 + 4899514 -----TATATAGTCTATAGTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44326 16 + 97742 -----TATATAGTCTATAGTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3694359 21 - 108555830 CATAATATATAGTCTATAGTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 44650 16 + 85016 -----TATATAGTCTATAGTT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1022547 16 - 1267912 -----TATATAGTCTATAGTT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46460670 21 - 47448759 tataatatataatttatagtt i calJac3.chr18 M 1769 C 0 s otoGar3.GL873538 19620985 21 - 27850971 TATGATATATAGTTTATGTTT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79069978 21 - 85426708 tataatatatattatgtattt i canFam3.chr2 C 0 I 194 e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e saiBol1.JH378197 6550 2177 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=20156.000000 s hg38.chr3_KI270784v1_alt 157739 3 + 184404 --TAT s panTro5.chr3 50737 3 - 202621043 --TAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 45690 3 - 205426864 --TAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64254 3 + 508821 --TAT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 29044 3 - 85730 --TAT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49363 3 - 181584905 --TAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 45678 3 + 4899514 --TAT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44342 3 + 97742 --TAT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3694380 5 - 108555830 TATAT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 44666 3 + 85016 --TAT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1022563 3 - 1267912 --TAT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46460691 5 - 47448759 tatat i calJac3.chr18 C 0 C 0 s otoGar3.GL873538 19621006 3 - 27850971 --TAT i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79069999 194 - 85426708 I e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e saiBol1.JH378197 6550 2177 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=250711.000000 s hg38.chr3_KI270784v1_alt 157742 50 + 184404 A--AATCCCTCAATTATGGGGTTCAAGT-------TTAGAATTCAAAAG-----TTTTTTTTAG s panTro5.chr3 50740 49 - 202621043 A--AATCCCTCAATTATGGGGTTCAATT-------TTAGAATTCAAAAG-----TTTGTTT-AG i panTro5.chr3 C 0 C 0 s panPan2.chr3 45693 49 - 205426864 A--AATCCCTCAATTATGGGGTTCAATT-------TTAGAATTCAAAAG-----TTTGTTT-AG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64257 50 + 508821 A--AATCCCTCAATTATGGGGTTCAATT-------TTAGAATTCAAAAG-----TTTTTTTTAG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 29047 52 - 85730 A--AATCCCTCAATTGTGGGGTAGAATT-------TTAGAATTCAAAAGTTT--TTTTTTT-AA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49366 51 - 181584905 A--AATCCCTCAATTGTGGGGTAGAATT-------TTAGAATTCAAAAG-TT--TTTTTTT-AA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 45681 51 + 4899514 A--AATCCCTCAATTGTGGGGTAGAATT-------TTAGAATTCAAAAG-TT--TTTTTTT-AA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44345 51 + 97742 A--AATCCCTCAATTGTGGGGTAGAATT-------TTAGAATTCAAAAG-TT--TTTTTTT-AG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3694385 46 - 108555830 A--AATCCCTCAATTATAGAGTTGGATT-------TTAGAATTCAGAAG--------TTTT-AA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 44669 51 + 85016 A--AATCCCTCAATTGTGGGGTAGAATT-------TTAGAATTCAAAAG-TT--TTTTTTT-AA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1022566 49 - 1267912 A--AATCCCTCAATTATGGGGTTGAATT-------TTAGAATTCAAAAG-----TTTTTTT-AA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46460696 51 - 47448759 a--aatCCCTCAATTATGGGGTTGAATT-------TTAGAACTCAGAGG-TT--TTTTTTT-AA i calJac3.chr18 C 0 C 0 s otoGar3.GL873538 19621009 54 - 27850971 ATTAAGTCCTTAGTAGTGGAGTTGAA-T-------TTAAAATTTAGAAG-TTGGGTTTTTT-GG i otoGar3.GL873538 C 0 I 309 s canFam3.chr2 79070193 52 - 85426708 a--ggtccctcA------GGAATGAATTTTCCAAATTAGACTTTATAAG-TT--GTTTTTT-AT i canFam3.chr2 I 194 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e saiBol1.JH378197 6550 2177 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=203668.000000 s hg38.chr3_KI270784v1_alt 157792 42 + 184404 -CTCTTTTTT---ATATGTATACCACAAGTAGTCATCTGCTCATAA s panTro5.chr3 50789 42 - 202621043 -CTCTTTTTT---ATATGTATACCACAAATAGTCATCTGCTCATAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 45742 42 - 205426864 -CTCTTTTTT---ATATGTATACCACAAATAGTCATCTGCTCATAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64307 42 + 508821 -CTCTTTTTT---ATATGTATACCACAAATAGTCATCTGCTCATAA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 29099 45 - 85730 -CTCTTTTTTTTAATATATATGCCACAAATAGTCATCTGCTTGTAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49417 45 - 181584905 -CTCTTTTTTTTAATATATATGCCACAAATAGTCATCTGCTTGTAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 45732 45 + 4899514 -CTCTTTTTTTTAATATATATGCCACAAATAGTCATCTGCTTGTAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44396 45 + 97742 -CTCTTTTTTTTAATATATATGCCACAAATAGTCATCTGCTTGTAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3694431 43 - 108555830 -TTCTTTTTTT--ATATCTATACCACAAATAGTCATCTGCTCATAA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 44720 45 + 85016 -CTCTTTTTTTTAATATATATGCCACAAATAGTCATCTGCTTGTAA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1022615 44 - 1267912 -CT-TTTTTAAAAATATATATGCCACAAATAGTCATCTGCTTGTAA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46460747 43 - 47448759 -CTCTTTTTCT--CTATATATACCACAAATAGTCATCTGCTCATAA i calJac3.chr18 C 0 I 8758 s otoGar3.GL873538 19621372 35 - 27850971 -CTCTTTCTTT--ATATGTATAC--------ATCATCTTCCCATTA i otoGar3.GL873538 I 309 C 0 s canFam3.chr2 79070245 10 - 85426708 ATTCCTTTTG------------------------------------ i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e saiBol1.JH378197 6550 2177 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=634146.000000 s hg38.chr3_KI270784v1_alt 157834 101 + 184404 GAATGC-CTGGA-------AGCCTTTTTAGGTTATTCCTGGTGAGAGTTGGCTAGTTTATGAATATTGCAA---ACATTA-TGTCATGCTTCTCAACA-ATGTCCCTTAAAAAT s panTro5.chr3 50831 101 - 202621043 GAATGC-CTGGA-------AGCCTTTTTAGGTTATTCCTGGTGAGAGTTGGCTAGTTTATGAATATTGCAA---ACATTA-TGTCATGCTTCTCAACA-ATGTCCCTTAAAAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 45784 101 - 205426864 GAATGC-CTGGA-------AGCCTTTTTAGGTTATTCCTGGTGAGAGTTGGCTAGTTTATGAATATTGCAA---ACATTA-TGTCATGCTTCTCAACA-ATGTCCCTTAAAAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64349 101 + 508821 GAATGC-CTGGA-------AGCCTTTTTAGGTTATTCCTGGTGAGAGTTGGCTAGTTTATGAATATTGCAG---ACATTA-TATCATGCTTCTCAACA-ATGTCCCTTAAAAAT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 29144 101 - 85730 GAATGC-CTAGA-------AGCCTTTTTAGGTTATTCCTGGTGAGAGTTGGCTAGTTTATGAATATTGCAG---ACACTA-TATCATTCTTTTCAGCA-ATGTCCCTTAAAAAT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49462 101 - 181584905 GAATGC-CTAGA-------AGCCTTTTTAGGTTATTCCTGGTGAGAGTTGGCTAGTTTATGAATATTGCAG---ACACTA-TATCATTCTTTTCAGCA-ATGTCCCTTAAAAAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 45777 101 + 4899514 GAATGC-CTAGA-------AGCCTTTTTAGGTTATTCCTGGTGAGAGTTGGCTAGTTTATGAATATTGCAG---ACACTA-TATCATTCTTTTCAGCA-ATGTCCCTTAAAAAT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44441 101 + 97742 GAATGC-CTAGA-------AGCCTTTTTAGGTTATTCCTGGTGAGAGTTGGCTAGTTTATGAATATTGCAG---ACACTA-TATCATTCTTCTCAGCA-ATGTCCCTTAAAAAT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3694474 101 - 108555830 GAATTC-CTAGA-------AGCCTTTTTAGGTTATGCCTACTGAGAAGTGGACAGATTATGAATATTGTAG---ACATTA-TATCTTTCTTCTCAGCA-ATGTCCCTTAAAAAT i chlSab2.chr12 C 0 I 295 s manLeu1.NW_012101680v1 44765 101 + 85016 GAATGC-CTAGA-------AGCCTTTTTAGTTTATTCCTGGTGAGAGTTGGCTAGTTTATGAATATTGCAG---ACACTA-TATCATTCTTCTCAGCA-ATGTCCCTTAAAAAT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1022659 101 - 1267912 GAATGC-CTAGA-------AGCCTTTTTAGGTTATTCCTGGTGAGAGTTGGCTAGTTTATGAATATTGCAG---ACACTA-TATCATTCTTCTCAGCA-ATGTCCCTTAAAAAT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46469548 100 - 47448759 GAATGC-CTAAA-------AGCCTTTCTGGGTTATTCCTGGTGAGAGTTGAATAGTTTATGAATATTCCAG---ACATTA-TATATTTCTTTCCAGTA-ATGTCCCTTAAAAT- i calJac3.chr18 I 8758 C 0 s otoGar3.GL873538 19621407 113 - 27850971 GAATGTGTTAGAGACATTGAGCTTTATTAGGTCACTCATGGTTATATTTGCATAGGTTATGCATATTGCAGACAACATTG-TATTTTTCACCTTAGCATTTTTCTCTTAGAAAT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79070255 102 - 85426708 GAATAT-CTGCA-------AGCCATTTGTGGTTAATCCTGGTTCTAGTTGGCTAGATTATGCATATTGCAG---ATAGTATTATCTTCCTCCTTGGTA-TTATTCCCCCAAAAT i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e saiBol1.JH378197 6550 2177 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=70579.000000 s hg38.chr3_KI270784v1_alt 157935 10 + 184404 GCAAGTGACT s panTro5.chr3 50932 10 - 202621043 GCAAGTGACT i panTro5.chr3 C 0 C 0 s panPan2.chr3 45885 10 - 205426864 GCAAGTGACT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64450 10 + 508821 GCAAGTGACT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 29245 10 - 85730 GCAAGTGACT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49563 10 - 181584905 GCAAGTGACT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 45878 10 + 4899514 GCAAGTGACT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44542 10 + 97742 GCAAGTGACT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3694870 10 - 108555830 GCAAGTGACT i chlSab2.chr12 I 295 C 0 s manLeu1.NW_012101680v1 44866 10 + 85016 GCAAGTGACT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1022760 10 - 1267912 GCAAGTGACT i colAng1.NW_012116822v1 C 0 M 634 s calJac3.chr18 46469648 10 - 47448759 ACAAGTGACG i calJac3.chr18 C 0 C 0 s otoGar3.GL873538 19621520 10 - 27850971 ATAAGTGATG i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79070357 10 - 85426708 GCAAATAATT i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e saiBol1.JH378197 6550 2177 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=281045.000000 s hg38.chr3_KI270784v1_alt 157945 46 + 184404 TATTGGCTTTTATTATGCTAGAAATAAGCCATATACATCAATATTA s panTro5.chr3 50942 46 - 202621043 TATTGGCTTTTATTATGCTAGAAATAAGCCATATACATCAATATTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 45895 46 - 205426864 TATTGGCTTTTATTATGCTAGAAATAAGCCATATACATCAATATTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64460 46 + 508821 TATTGGCTTTTATTATGCTAGAAATAAGCCATATACATCAATATTA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 29255 46 - 85730 TATTGGCTTTTATTATGCTAGAAATAAGCCATATACATCAATATTA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49573 46 - 181584905 TATTGGCTTTTATTATGCTAGAAATAAGCCATATACATCAATATTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 45888 46 + 4899514 TATTGGCTTTTATTATGCTAGAAATAAGCCATATACATCAATATTA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44552 46 + 97742 TATTGGCTTTTATTATGCTAGAAATAAGCCATATACATCAATATTA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3694880 46 - 108555830 TACTGGCTTTTGTTATTCTAGAAATAAACCCTATACATCAGTATTA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 44876 46 + 85016 TATTGGCTTTTATTATGCTAGAAATAAGCCATATATATCAATATTA i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46469658 46 - 47448759 TATTGGCTTTTATTATTCCAGAAATAAGCCATATACATCAGTATTC i calJac3.chr18 C 0 C 0 s otoGar3.GL873538 19621530 46 - 27850971 TAATGGCTCTCATTATGCTAAAAATAATCTATACAGTTCAGTATTA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79070367 46 - 85426708 TAGTAGCTTTGATTATGCTAAAAATAATCTGTATAAATCAGTATTA i canFam3.chr2 C 0 I 103 e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e saiBol1.JH378197 6550 2177 + 8899380 M e colAng1.NW_012116822v1 1022770 634 - 1267912 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=335468.000000 s hg38.chr3_KI270784v1_alt 157991 60 + 184404 AAACTTTTATTGATAAGCCATTGTAATTTTATTTCTGATTTACATTTTGCCTAAAGTAAA s panTro5.chr3 50988 60 - 202621043 AAACTTTTATTGATAAGCCATTGTAATTTTATTTCTGATTTACATTTTGCCTAAAGTAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 45941 60 - 205426864 AAACTTTTATTGATAAGCCATTGTAATTTTATTTCTGATTTACATTTTGCCTAAAGTAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64506 50 + 508821 AAACTTTTATTGATAAGCCATTG----------TCTGATTTACATTTTGCCTAAAGTAAA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 29301 60 - 85730 AAATTTTTATTGATAATCCATTGTAATTTCATTTCTGATTTATATTTTGCCTAAAGTAAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49619 60 - 181584905 AAATTTTTATTGATAATCCATTGTAATTTCATTTCTGATTTATATTTTGCCTAAAGTAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 45934 60 + 4899514 AAATTTTTATTGATAATCCATTGTAATTTCATTTCTGATTTATATTTTGCCTAAAGTAAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44598 60 + 97742 AAATTTTTATTGATAATCCATTGTAATTTCATTTCCGATTTATATTTTGCCTAAAGTAAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3694926 60 - 108555830 GAACTTTTATTGAGAGGCCATTGTATTTTTATTTCTGCTTTATATTTTGCCTAACGTAAA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 44922 60 + 85016 AAATTTTTATTGATAATCCATTGTAATTTCATTTCCGATTTATATTTTGCCTAAAGTAAA i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46469704 59 - 47448759 GAACTTATATTGATAAGCCATTGTATTTTT-TTTCTGATTTATATTTTGCCTAAAGTAAA i calJac3.chr18 C 0 I 1 s otoGar3.GL873538 19621576 60 - 27850971 GAAGTATTACTGATGAGCCTTTTTATTTTTATTTCTGATTCGTATTTTGCCTAAAATAAA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79070516 60 - 85426708 GAATTTTTATTGATAAGCCATTATATTTTTATTTCTGATTTACATTTTGCCtataatata i canFam3.chr2 I 103 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e saiBol1.JH378197 6550 2177 + 8899380 M e colAng1.NW_012116822v1 1022770 634 - 1267912 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=311993.000000 s hg38.chr3_KI270784v1_alt 158051 55 + 184404 AA-AA---AA-ATGTTAAATAGCAATTTGAATGGAAACC--AATACAAATGGAT-------TTAAAAAG s panTro5.chr3 51048 54 - 202621043 AA-AA---AA--TGTTAAATAGCAATTTGAATGGAAACC--AATACAAATGGAT-------TTAAAAAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 46001 53 - 205426864 AA-AA---A---TGTTAAATAGCAATTTGAATGGAAACC--AATACAAATGGAT-------TTAAAAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64556 56 + 508821 AA-AA---AAAATGTTAAATAGCAATTTGAATGGAAACC--AATACAAATGGAT-------TTAAAAAG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 29361 52 - 85730 ---AA---AA--TGTTAAATAGCAATTTAAATGGAAACC--AATACAAATGGAT-------TTAAAAAG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49679 52 - 181584905 ---AA---AA--TGTTAAATAGCAATTTAAATGGAAACC--AATACAAATGGAT-------TTAAAAAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 45994 52 + 4899514 ---AA---AA--TGTTAAATAGCAATTTAAATGGAAACC--AATACAAATGGAT-------TTAAAAAG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44658 52 + 97742 ---AA---AA--TGTTAAATAGCAATTTAAATGGAAACC--AATACAAATGGAT-------TTAAAAAG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3694986 55 - 108555830 ---AAAATAA--TGTTAAATAGCAGTTTAAATGGAAACC--AGTACAAATGGAT-------TTAAAAAG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 44982 52 + 85016 ---AA---AA--TGTTAAATAGCAATTTAAATGGAAACC--AATACAAATGGAT-------TTAAAAAG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1023418 55 - 1267912 AAAAA---AA--TGTTAAATAGCAATTTAAATGGAAACA--AATACAAATGGAT-------TTAAAAAG i colAng1.NW_012116822v1 M 634 C 0 s calJac3.chr18 46469764 61 - 47448759 AA-AT---AA--TGTTAAATAGCAGTGTAAATGGAAACC--AATACAAATCGATCAAAAAATTATAAAG i calJac3.chr18 I 1 C 0 s otoGar3.GL873538 19621636 53 - 27850971 AA-AA---AG--ACTT---TAGCAATCAAAATGGAAACCAGAATAAAAATGGAT-------TAAAAAAG i otoGar3.GL873538 C 0 I 287 s canFam3.chr2 79070576 60 - 85426708 aa-at---aa--ttataaataGCAATCATAGTGGAAACTAGAATACAAACAGGTTTTT---TTTAGAAG i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e saiBol1.JH378197 6550 2177 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=373087.000000 s hg38.chr3_KI270784v1_alt 158106 54 + 184404 TAAAGTTGCATTAGCATCCCAGGGTTATCATTATAATTGAGAATAAAATTTCTT s panTro5.chr3 51102 54 - 202621043 TAAAGTTGCATTAGCATCCCAGGGTTATCATTATAATTGAGAATAAAATTTCTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 46054 54 - 205426864 TAAAGTTGCATTAGCATCCCAGGGTTATCATTATAATTGAGAATAAAATTTCTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64612 54 + 508821 TAAAGTTGCATTAGCATCCCAGGATTATCATTATAATTGAGAATAACATTTCTT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 29413 54 - 85730 TAAAGTTGCATTAGCATCCCAGGATTATCATTATAATTGACAATAAAATTTCTT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49731 54 - 181584905 TAAAGTTGCATTAGCATCCCAGGATTATCATTATAATTGACAATAAAATTTCTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 46046 54 + 4899514 TAAAGTTGCATTAGCATCCCAGGATTATCATTATAATTGACAATAAAATTTCTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44710 54 + 97742 TAAAGTTGCATTAGCATCCCAGGATTATCATTATAATTGACAATAAAATTTCTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3695041 54 - 108555830 TAAAGTTGCATTAGCATCCCAGAATTATCATTATAATTGAGAATAAAATTTCTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 45034 54 + 85016 TAAAGTTGCATTAGCATCCCAGGATTATCATTATAATTGACAATAAAATTTCTT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1023473 54 - 1267912 TAAAGTTGCATTAGCATCCCAGGATTATCATTATAATTGACAATAAAATTTCTT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46469825 54 - 47448759 TAAAGCTGCATTAGGGTTCCAGAATTTTCACTATAATTAAGAATAAAttttttt i calJac3.chr18 C 0 I 280 s otoGar3.GL873538 19621976 54 - 27850971 AAGATACACATTTGGGTCCCAGGGTTGTCATTATAATTGAGAATAAAATTTCAT i otoGar3.GL873538 I 287 C 0 s canFam3.chr2 79070636 51 - 85426708 TAGATATGCATTAGCGTCCCAGAATT---ATTATAATTGAGAATAAAATCTCAT i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e saiBol1.JH378197 6550 2177 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=33858.000000 s hg38.chr3_KI270784v1_alt 158160 5 + 184404 ACTGA s panTro5.chr3 51156 5 - 202621043 ACTGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 46108 5 - 205426864 ACTGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64666 5 + 508821 ACTGA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 29467 5 - 85730 ACTGA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49785 5 - 181584905 ACTGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 46100 5 + 4899514 ACTGA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44764 5 + 97742 ACTGA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3695095 5 - 108555830 ACTGA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 45088 5 + 85016 ACTGA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1023527 5 - 1267912 ACTGA i colAng1.NW_012116822v1 C 0 C 0 s otoGar3.GL873538 19622030 5 - 27850971 ACTGA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79070687 5 - 85426708 ATCGA i canFam3.chr2 C 0 I 362 e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e calJac3.chr18 46469879 280 - 47448759 I e saiBol1.JH378197 6550 2177 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=65730.000000 s hg38.chr3_KI270784v1_alt 158165 16 + 184404 GCTTTGCTTTTTTAAT s panTro5.chr3 51161 16 - 202621043 GCTTTGCTTTTTTAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 46113 16 - 205426864 GCTTTGCTTTTTTAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64671 16 + 508821 GCTTTGCTTTTTTAAT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 29472 16 - 85730 GCTTTGCTTTTTAAAT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49790 16 - 181584905 GCTTTGCTTTTTAAAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 46105 16 + 4899514 GCTTTGCTTTTTAAAT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44769 16 + 97742 GCTTTGCTTTTTAAAT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3695100 15 - 108555830 GCTTTGCTTTTT-AAT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 45093 16 + 85016 GCTTTGCTTTTTAAAT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1023532 16 - 1267912 GCTTTGCTTTTTTGAT i colAng1.NW_012116822v1 C 0 C 0 s otoGar3.GL873538 19622035 6 - 27850971 ACTTCG---------- i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79070692 362 - 85426708 I e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e calJac3.chr18 46469879 280 - 47448759 I e saiBol1.JH378197 6550 2177 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=217504.000000 s hg38.chr3_KI270784v1_alt 158181 43 + 184404 ATTTATTTTCAAACACTTTTAACCTGTCTCTCTTACACAGAAT s panTro5.chr3 51177 43 - 202621043 ATTTATTTTCAAACACTTTTAACCTGTCTCTCTTACACAGAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 46129 43 - 205426864 ATTTATTTTCAAACACTTTTAACCTGTCTCTCTTACACAGAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64687 43 + 508821 ATTTACTTTCAAACACTTTTAACCTGTCTCTCTTACACAGAAT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 29488 43 - 85730 ATTTGTTTTCAAACATTTTTAACCTGTCTCTCTTACACAGAAT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49806 43 - 181584905 ATTTGTTTTCAAACATTTTTAACCTGTCTCTCTTACACAGAAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 46121 43 + 4899514 ATTTGTTTTCAAACATTTTTAACCTGTCTCTCTTACACAGAAT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44785 43 + 97742 ATTTGTTTTCAAACATTTTAAACCTGTCTCTCTTACACAGAAT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3695115 43 - 108555830 ATTTATTTTCAAAAATTTTTAACTGGTCTATATTACACAGAAC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 45109 43 + 85016 ATTTGTTTTCAAACATTTTAAACCTGTCTCTCTTACACAGAAT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1023548 43 - 1267912 ATTTATTTTCAAACATTTTTAACCTGTCTCTCTTACACAGAAT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46470159 43 - 47448759 ACTTATTTTCAAAAAATTTTAACTTGCTTCTCTTATACAGAAC i calJac3.chr18 I 280 C 0 s otoGar3.GL873538 19622041 5 - 27850971 --------------------------------------AAAAT i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79070692 362 - 85426708 I e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e saiBol1.JH378197 6550 2177 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=315960.000000 s hg38.chr3_KI270784v1_alt 158224 49 + 184404 ATACTGAGCTTTCTAACAGTTAAGATAAAAATCTATCCTCTTGTATTAG s panTro5.chr3 51220 49 - 202621043 ATACTGAGTTTTCTAACAGTTAAGATAAAAATCTATCCTCTTATATTAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 46172 49 - 205426864 ATACTGAGCTTTCTAACAGTTAAGATAAAAATCTATCCTCTTATATTAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64730 49 + 508821 ATACTGAGCTTTCTAACAGTTAAGATAAAAATCTATCCTCTTGTATTAG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 29531 49 - 85730 ATACTGAGCTTTCTAACAGTTAAGATAAAAATCTATCCTCTTGTAATAG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49849 49 - 181584905 ATACTGAGCTTTCTAACAGTTAAGATAAAAATCTATCCTCTTGTAATAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 46164 49 + 4899514 ATACTGAGCTTTCTAACAGTTAAGATAAAAATCTATCCTCTTGTAATAG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44828 49 + 97742 ATACTGAGCTTTCTAACAGTTAAGATAAAAATCTATCCTCTTGTATTAG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3695158 47 - 108555830 ATGCTGAACTTTCTA--AGTTAAGATAAAAATCTATCCTCTTGTATTAG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 45152 49 + 85016 ATACTGAGCTTTCTAACAGTTAAGATAAAAATCTATCCTCTTGTATTAG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1023591 49 - 1267912 ATATTGAGCTTTCTAACAGTTAAGATAAAAATCTATCCTCTTGTATTAG i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46470202 49 - 47448759 ACACTGAGCTTTTTGTCAGTTAAGATAAAAATCTATCCTTTTGTATTAG i calJac3.chr18 C 0 C 0 s otoGar3.GL873538 19622046 32 - 27850971 -----------------AGTTAAGAATAAAATTTATGATCTTACAATAG i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79071054 47 - 85426708 ATATTGAGCTTTATAACAGCTAAGATAAAAATTAATCATTTTATAAT-- i canFam3.chr2 I 362 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e saiBol1.JH378197 6550 2177 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=204571.000000 s hg38.chr3_KI270784v1_alt 158273 27 + 184404 GAGAAATCCCATGGAC--TATTTAATAAT s panTro5.chr3 51269 27 - 202621043 GAGAAATCCCATGGAC--TATTTAATAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 46221 27 - 205426864 GAGAAATCCCATGGAC--TATTTAATAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64779 27 + 508821 GAGAAATCCCATGGAC--TATTTAATAAT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 29580 27 - 85730 GAGAAATCCCATGGAC--TATTTAATAAT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49898 27 - 181584905 GAGAAATCCCATGGAC--TATTTAATAAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 46213 27 + 4899514 GAGAAATCCCATGGAC--TATTTAATAAT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44877 27 + 97742 GAGAAATCCCATGGAC--TATTTAATAAT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3695205 27 - 108555830 GAAAAATCCCATGCAC--TATTTAATAGT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 45201 27 + 85016 GAGAAATCCCATGGAC--TACTTAATAAT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1023640 27 - 1267912 GAGAAATCCCATGGAC--TATTTAATAAT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46470251 27 - 47448759 GAGAAAACTCATGAAC--TGTTTAATAAT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 8727 29 + 8899380 GAGAAAACCCATGAACTATATTTATTAAA i saiBol1.JH378197 M 2177 C 0 s otoGar3.GL873538 19622078 27 - 27850971 GAGAAAACCCACAACC--CATTTAGTAAT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79071101 26 - 85426708 -AGAAATTTCAGGGAC--TACTTATTTAT i canFam3.chr2 C 0 I 586 e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e nomLeu3.chr11 155835 49227 - 123690457 I a score=28129.000000 s hg38.chr3_KI270784v1_alt 158300 5 + 184404 AATGA s panTro5.chr3 51296 5 - 202621043 AATGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 46248 5 - 205426864 AATGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64806 5 + 508821 AATGA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 29607 5 - 85730 AATGA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49925 5 - 181584905 AATGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 46240 5 + 4899514 AATGA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44904 5 + 97742 AATGA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3695232 5 - 108555830 AAGGA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 45228 5 + 85016 AATGA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1023667 5 - 1267912 AATGA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46470278 5 - 47448759 AAGGA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 8756 5 + 8899380 AAGAA i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19622105 5 - 27850971 AAGTG i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79071127 586 - 85426708 I e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e nomLeu3.chr11 155835 49227 - 123690457 I a score=9555.000000 s hg38.chr3_KI270784v1_alt 158305 1 + 184404 A s panTro5.chr3 51301 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 46253 1 - 205426864 A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64811 1 + 508821 A i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 29612 1 - 85730 A i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49930 1 - 181584905 A i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 46245 1 + 4899514 A i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44909 1 + 97742 A i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3695237 1 - 108555830 A i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 45233 1 + 85016 A i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1023672 1 - 1267912 A i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46470283 1 - 47448759 A i calJac3.chr18 C 0 M 8193 s saiBol1.JH378197 8761 1 + 8899380 A i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19622110 1 - 27850971 A i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79071713 1 - 85426708 a i canFam3.chr2 I 586 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e nomLeu3.chr11 155835 49227 - 123690457 I a score=3150099.000000 s hg38.chr3_KI270784v1_alt 158306 497 + 184404 AATAAGTGCA-TTGAAGCCAGTCTCTCTTAATTCAGAGCTCATTTCCTTAGTGACCCATTCGGATCAGGAGTGCCT-----GACATTGACATT--GGATCCTGACACCATTTACAGAAGTAAATCAAGCAAGTTTGTACCACCCAGAGGAAACCTCCACCTGAACTGGGAAGTTCTGGCAACTGTATCCCTG-----------------------AAACTCTAGTTCCTAAAA---------TGTTAACGTTTGC--CACAAAAA-GTATTGTCAAATTGGAATTAGGCAAAGTTGAAGGGATTTCTTGATTGTTGACCATATA--ATACAGTTTTGTAATACTTCTCAAATGCAGGTGATCATGGCATCTTTCTGTTGGGGTACAGTT-----CTTCTGGTAAAACAAATATTCCTTGGAAGATAGTTTAAGAAACACTGCTCTAAAGATAATAATTTTCATCATTAATTTATT----------------TTAAAAACCTAAAGCATTTGctactatgtattaggttttagggttgt------agag---aaaaaggacacagc-------------------------------------------------------------------------ccttgcc s panTro5.chr3 51302 497 - 202621043 AATAAGTGCA-TTGAAGTCAGTCTCTCTTAATTCAGAGCTCATTTCCTTAGTGACCCATTTGGATCAGGAGTGCCT-----GACATTGACATT--GGATCCTGACACCATTTATAGAAGTAAATCAAGCAAGTTTGCACCACCCAGAGGAAACCTCCACCTGAACTGGGAAGTTCTGGCAACTGTATCCCTG-----------------------AAACTCTAGTTCCTAAAA---------TGTTAACGTTTGC--CACAAAAA-GTATTGTCAAATTGGAATTAGGCAAAGTTGAAGGGATTTCTTGATTGTTGGCCATATA--ATACGGTTTTGTAATACTTCTCAAATGCAGGTGATCATGGCATCTTTCTGTTGGGGTACAGTT-----CTTCTGGTAAAACAAATATTCCTTGGAAGATAGTTTAAGAAACACTGCTCTAAAGATAATAATTTTCATCATTAATTTATT----------------TTAAAAACCTAAAGCATTTGctactatgtattaggttttagggttgt------agag---aaaaaggacacagc-------------------------------------------------------------------------ccttgcc i panTro5.chr3 C 0 C 0 s panPan2.chr3 46254 497 - 205426864 AATAAGTGCA-TTGAAGTCAGTCTGTCTTAATTCAGAGCTCATTTCCTTAGTGACCCATTTGGATCAGGAGTGCCT-----GACATTGACATT--GGATCCTGACACCATTTATAGAAGTAAATCAAGCAAGTTTGCACCACCCAGAGGAAACCTCCACCTGAACTGGGAAGTTCTGGCAACTGTATCCCTG-----------------------AAACTCTAGTTCCTAAAA---------TGTTAACGTTTGC--CACAAAAA-GTATTGTCAAATTGGAATTAGGCAAAGTTGAAGGGATTTCTTGATTGTTGGCCATATA--ATACGGTTTTGTAATACTTCTCAAATGCAGGTGATCATGGCATCTTTCTGTTGGGGTACAGTT-----CTTCTGGTAAAACAAATATTCCTTGGAAGATAGTTTAAGAAACACTGCTCTAAAGATAATAATTTTCATCATTAATTTATT----------------TTAAAAACCTAAAGCATTTGctactatgtattaggttttagggttgt------agag---aaaaaggacacagc-------------------------------------------------------------------------ccttgcc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 64812 498 + 508821 AATAAGTGCATTTGAAGCCAGTCTCTCTCAATTAAGAGCTCATTTCCTTAGTGACCCATTTGGATCAGGAGTGCCT-----GACATTGACATT--GGATCCTGACACTATTTGTAGAAGTAAATCAAGCAAGTTTGTACCACCCAGAGGAAACCTCCACCTGAACTGGGAAGTTCTGGCAACTGTATCCCTG-----------------------AAACTCTAGTTCTTAAAA---------TGTTAACGTTTGC--CACAAAAA-GTATTGTCAAATTGGAATTAGGCAAAGTTGAAGGGATTTCTTGATTGTTGGCCATATA--ATACAGTTTTGTAATACTTCTCAAATGCAGGTGATCATGGCATCTTTCTGTTGGGGTACAGTT-----CTTCTGGTAAAACAAATATTCCTTGGAACATAGTTTAAGAAACACTGCTCTAAAGATAATAATTTTCATCATTAATTTATT----------------TTAAAAACCTAAAGCATTTGctactatgtattaggttttagggttgt------agag---aaaaaggacacagc-------------------------------------------------------------------------ccttgcc i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 29613 498 - 85730 AATAAGTGCATTTGAAGCCAG--TCTCTTAATTCAGAGCTCATTTCCTTAGTGACCCATTTGAATCAGGAGTGCCT-----GACATTGGGATCTGGGATCCTGACACCATTGATAGACGTAAATCAAGCAAGTTTGTACCACCCAGAGGAAACCTCCACCTGAACTGGGAAGTTCTGGCAACTGTATCCCTG-----------------------AAACTCTAGTTTGTAAAA---------TGTTAATATTTGT--CACAAAAA-GTATTGTCAAATTGGGATTAGGCAAAGTTGAAGGGATTTCTTGATTGTTGGCCATATA--GTACAGTTTTGTAATACTTGTCAAATGCAGATGATCATCTCATCTTTCTGTTGGGATACAGTT-----CTTCTGGTAAAACAAATATTCTTTGGTACATAGTTTAAGAAACACTGCTCTAAAGATAATAATTTACATCATTAATTTATT----------------TTAAAAACCTAAAGCATTTGctactatgtattaggttttagggttat------aaag---aaaaaagacacagc-------------------------------------------------------------------------tcttgcc i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 49931 498 - 181584905 AATAAGTGCATTTGAAGCCAG--TCTCTTAATTCAGAGCTCATTTCCTTAGTGACCCATTTGAATCAGGAGTGCCT-----GACATTGGGATCTGGGATCCTGACACCATTGATAGACGTAAATCAAGCAAGTTTGTACCACCCAGAGGAAACCTCCACCTGAACTGGGAAGTTCTGGCAACTGTATCCCTG-----------------------AAACTCTAGTTTGTAAAA---------TGTTAATATTTGT--CACAAAAA-GTATTGTCAAATTGGGATTAGGCAAAGTTGAAGGGATTTCTTGATTGTTGGCCATATA--GTACAGTTTTGTAATACTTGTCAAATGCAGATGATCATCTCATCTTTCTGTTGGGATACAGTT-----CTTCTGGTAAAACAAATATTCTTTGGTACATAGTTTAAGAAACACTGCTCTAAAGATAATAATTTACATCATTAATTTATT----------------TTAAAAACCTAAAGCATTTGctactatgtattaggttttagggttat------aaag---aaaaaagacacagc-------------------------------------------------------------------------tcttgcc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 46246 498 + 4899514 AATAAGTGTATTTGAAGCCAG--TCTCTTAATTCAGAGCTCATTTCCTTAGTGACCCATTTGAATCAGGAGTGCCT-----GACATTGGGATCTGGGATCCTGACACCATTGATAGACGTAAATCAAGCAAGTTTGTACCACCCAGAGGAAACCTCCACCTGAACTGGGAAGTTCTGGCAACTGTATCCCTA-----------------------AAACTCTAGTTCATAAAA---------TGTTAATATTTGT--CACAAAAA-GTATTGTCAAATTGGGATTAGGCAAAGTTGAAGGGATTTCTTGATTGTTGGCCATATA--GTACAGTTTTGTAATACTTGTCAAATGCAGATGATCATCTCATCTTTCTGTTGGGATACAGTT-----CTTCTGGTAAAACAAATATTCTTTGGTACATAGTTTAAGAAACACTGCTCTAAAGATAATAATTTACATCATTAATTTATT----------------TTAAAAACCTAAAGCATTTGctactatgtattaggttttagggttat------aaag---aaaaaagacacagc-------------------------------------------------------------------------tcttgcc i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 44910 495 + 97742 AATAAGTGCATTTGAAGCCAG--TCTCTTAATTCAGAGCTCATTTCCTTAGTGACCCATTTGAATCAGGAGTGCCT-----GACATTGGGATCTGGGATCCTGACACCATTGATAGACGTAAATCAAGCAAGTTTGTACCACCCAGAGGAAACCTCCACCTGAATTGGGAAGTTCTGGCAACTGTATCCCTG-----------------------AAACTCTAGTTCCTAAAA---------TGTTAATATTTGT--CACAAAAA-GTATTGTCAAATTGGGATTAGGCAAAGTTGAAGGGATTTCTTGATTGTTGGCCATATA--GTACAGTTTTGTAATACTTGTCAAATGCAGATGATCATCTCATCTTTCTGTTGGGATACAG--------TTCTGGTAAAACAAATATTCTTTGGTACATAGTTTAAGAAACACTGCTCTAAAGATAATAATTTACATCATTAATTTATT----------------TTAAAAACCTAAAGCATTTGctactatgtattaggttttagggttat------aaag---aaaaaagacacagc-------------------------------------------------------------------------tcttgcc i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3695238 490 - 108555830 AATAAGTGCATTTGAAGCCAATCTCTCTTAATTCAGAGCTCATTTCCTTAGTGACCCATTTGAATCAGGAGTGCCT-----GACAT-------TGACATCCTGACACCATTGATACAAGTGAATCAAGCAAGTTTGTGCCACCCAGGGGAAACCTACACTTGTATTGCGAAGCTCTGACAACTGTGTCCCTG-----------------------AAACTCTATTTCCTAAAG---------TGTTAATGTTTGC--CACAAAAA-GTATTGTCAAATTGAGATTAGGCAAAGTTCAAGGGATTTCTAGATTTTTGGCCATGTA--ATACAGTTTTGTAATACTTCTCAAATGCAGATGATCATGGAACCTTTTTGTTGGGGTACAGTT-----CTTCTGGTAAAACAAATATTCTTTGAAATATAGTTTAAGAAACACTGCTCTAGAG---ATAATTTAAATCattaatttatt----------------ttaaaaacttaaagcatttgctactacgtcttaggttttagggttat------agag---aaaaaagatacagc-------------------------------------------------------------------------ccttgcc i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 45234 495 + 85016 AATAAGTGCATTTGAAGCCAG--TCTCTTAATTCAGAGCTCATTTCCTTAGTGACCCATTTGAATCAGGAGTGCCT-----GACATTGGGATCTGGGATCCTGACACCATTGATAGACGTAAATCAAGCAAGTTTGTACCACCCAGAGGAAACCTCCACCTGAATTGGGAAGTTCTGGCAACCGTATCCCTG-----------------------AAACTCTAGTTCCTAAAA---------TGTTAATATTTGT--CACAAAAA-GTATTGTCAAATTGGGATTAGGCAAAGTTGAAGGGATTTCTTGATTGTTGGCCACATA--GTACAGTTTTGTAATATTTGTCAAATGCAGATGATCATCTCATCTTTCTGTTGGGATACAG--------TTCTGGTAAAACAAATATTCTTTGGTACATAGTTTAAGAAACACTGCTCTAAAGATAATAATTTACATCATTAATTTATT----------------TTAAAAACCTAAAGCATTTGctactatgtattaggttttagggttat------aaag---aaaaaagacacagc-------------------------------------------------------------------------tcttgcc i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1023673 495 - 1267912 AATAAGTGCATTTGAAGCCAGTCTCTCTTAATTCAGAGCTCATTTCCTTAGTGACCCATTTGGATCAGGAGTGCCT-----GACATTGGGATCTGAGATCCTGACACCATTGATAGAAGTAAATCAAGCAAGTTTGTACCACCCAGAGGAAATCTCCACCTGAACTGGGAAGTTCTGGCaactgtatccctg-----------------------aaactctagttcctaaaa---------tgttaatatttgt--cacaaaaa-gtattgtcaaattgggattaggcaaagttgaagggatttcttgattgctggCCATATA--GTACAGTTTTGTAATACTTCTCAAATGCAGATGATCATCTCATCTTTCTGTTGGGATACAGTT-----CTTCTGGTAAAACAAATATTGTTTGGTACACAGTTTAAGAAACACTGCTCTAAAGATAATAATCTACATCA-----TTATT----------------TTAAAAACCTAAAGCATTTGctactatgtattaggttttagggttat------aaag---aaaaaagacacagc-------------------------------------------------------------------------ccttgcc i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 8762 502 + 8899380 AATAAGTGCACTTGAAACCAATTTCTCTTATTTCAGAGCTCATTTCCTTAGTCACCCACTTGAATGAGGAGTGCCT-----AACATTGGCATCTGGGATCCTGTCACCATTAATAGAAGTGAATCAAGCAAGTTTGGGATACCCAGAGGAAACCTCCATCTGTATTAGGAATCTCTGGCAACTGTATCCCTG-----------------------AAACTCTAGTTTCTAAAA---------TGTGATCGTTTGG--CACAAAAA-GTATGGTCAAATTGGGATCAGGCAAAGTTCAGGAGATTTCTTGATTGTTAGACACACA--ATACAGTTTTGTAATACTTCTCAAATGCACATGATCATGGAATCCTTCTGTTGGGGTATAGTA-----CTTCTGGTAAAACAAATATTCTTTGGAACACAGTTTAAGAAACATTGCTCTAGAGACAATGATTTAGATCA----TTTATT----------------TTTTAAATTTGAAGCATTTGTtactatgtcttcggttttagggttatatagagagaa---aagaaagatacagc-------------------------------------------------------------------------ccttgct i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19622111 635 - 27850971 TACAAGTTCATTTGAAGTTTGTCTCTTTTAATTCAGAGCCCATTTCCTTGGAGATCCCTTTGGACAAGGAGTGCTCCAAAGCACATTGGCAACTAGGATCCTCATACTTTTGACAGGAGTGAATCAAGCAAGTTTGTATTATCTAGAAGAAACCTCCACCTTTACTGGAAAGCTCTTAAAACTATATCCCTGTAAAAAGAAGAAAAGAAAAAAAAAAACATATATTCCTGAAACCCTAATTCTGCAAATGTTTGCAACAAAAAAA-GTGTTGCCAAATACGGATTAGGCACAGTTTAAGAGATTTCTTTAATACTGGACATAGAAGGCACAGTTGTGTAATATTTCCCAAACACAGATGATCATGAAATCTTTCTGTTGGTATATAGTCCTCAACTTCTGTTAAAGTAAATGTTCTTTGGAATATAGCTTAAGAAATACTGCTCTAGAGATAATGATTTAGATCATTAATTCAATAAAAATACTTGAATGCTTTAATACTTTAAACGTTTACTACTGTGTCTTAGGGTTTGGGGCTAC------AGAG---AGAAAAGATATAGCTCCCTgggtggtgcctgtggctcagtgagtgggtgccagccccatataccaatggtggcaggttcaaacccggccctgcc i otoGar3.GL873538 C 0 I 202 s canFam3.chr2 79071714 490 - 85426708 accaggtgcc-cTGAAACCTCTCTCTTTTCATTCAGAGTCCATCTCCTTAGTGACTTATTTGGAGCAGAAGTGATT-----TATGTTGACATCTGAGCTCCCCATACCACTGATAGAACAGAATCAAGCAAGTTTGTACAACCTGGAGAAAACCTTCACTTTTATTGGAAAGTTCTTAAAACTATACCCCTG----------------------GGAACTCTTATTTCTCAAA---------TATTAAGGTTTGC--TACAAAAAGGTATTGTCAAATGGGGAT-AAGCAAATTT---AGGACTTCTTTTCTGCTAGATATATA--GTGCAGTTTTGTAATATTTCTCAAACACAAATGATCACTGAATCTTTCTTTTGGGGCACAGTATGTACCTTCTTGC-AAGTATATATTCTTTGGAATA-----TAAGAAACACAACTCCAGAGATattcattaaaatcaataaaatact----------------tt---------aagtatttactactatgttttagagattggggatac------agagataaaaaaaaaaataac-------------------------------------------------------------------------cccttcc i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=806736.000000 s hg38.chr3_KI270784v1_alt 158803 145 + 184404 ctcaagaaactcttgg-tttcagtgggaaacagtgaaataattacaacatat--tgtgctaaatgctgtgatagaagcaAGGATTTTCAGGACTGGTAAA----TAAAGTCAGTTTTGGAGATGATCAAAGTTAACGTG-----------------------------------------------------------------------------------------------------------------GGGAGGGAGAG-------GA-- s panTro5.chr3 51799 145 - 202621043 ctcaagaaactcttgg-tttcagtgggaaacagtgaaataattacaacatat--tgtgctaaatgctgtgatagaagcaAGGATTTTCAGGACTGGTAGA----TAAAGTCAGTTTTGGAGATGATCAAAGTTAACGTG-----------------------------------------------------------------------------------------------------------------GGGAGGGAGAG-------GA-- i panTro5.chr3 C 0 C 0 s panPan2.chr3 46751 145 - 205426864 ctcaagaaactcttgg-tttcagtgggaaacagtgaaataattacaacatat--tgtgctaaatgctgtgatagaagcaAGGATTTTCAGGACTGGTAGA----TAAAGTCAGTTTTGGAGATGATCAAAGTTAACGTG-----------------------------------------------------------------------------------------------------------------GGGAGGGAGAG-------GA-- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 65310 145 + 508821 ctcatgaaactcttgg-tttcagtgggaaacagtgaaataattacaacatat--tgtgctaaatgctgtgatagaagcaAGGATTTTCAGGACTGGTAAA----TAAAGTCAGTTTTGGAGATGATCAAAGTTAACGTG-----------------------------------------------------------------------------------------------------------------GGGAGGGAGAG-------GA-- i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30111 145 - 85730 ctcaagaaactcttgg-tttcagtgggaaacagtgaaataattacaacatat--tgtgctaaaagctgtgatagaatcaaggattttggggatttgtaaa----taaagtcaggtttggagatgatctaagttaacgtg-----------------------------------------------------------------------------------------------------------------gggaggcagag-------ga-- i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 50429 145 - 181584905 ctcaagaaactcttgg-tttcagtgggaaacagtgaaataattacaacatat--tgtgctaaaagctgtgatagaatcaaggattttggggatttgtaaa----taaagtcaggtttggagatgatctaagttaacgtg-----------------------------------------------------------------------------------------------------------------gggaggcagag-------ga-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 46744 145 + 4899514 ctcaagaaactcttgg-tttcagtgggaaacagtgaaataattacaacatat--tgtgctaaaagctgtgatagaatcaaggattttggggatttgtaaa----taaagtcaggtttggagatgatctaagttaacgtg-----------------------------------------------------------------------------------------------------------------gggaggcagag-------ga-- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 45405 145 + 97742 ctcaagaaactcttgg-tttcagtgggaaacagtgaaataattacaacatat--tgtgctaaaagctgtgatagaaTCAAGGATTTTGGGGATTTGTAAA----TAAAGTCAGGTTTGGAGATGATCTAAGTGAACGTG-----------------------------------------------------------------------------------------------------------------GGGAGGCAGAG-------GA-- i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3695728 152 - 108555830 ctcaagaagctcttgg-tttcagtgggaaacaatgaaataattacaatatac--tgtgctaaatgctgagatagaagcaAGGATTTTTGGGACTGGTAAA----GAAAGTGAGTTTTGGAGATGACCGAAGTTAATGTG-----------------------------------------------------------------------------------------------------------------GGGAGGCAGAGGAGGGGTGA-- i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 45729 145 + 85016 ctcaagaaactcttgg-tttcagtgggaaacagtgaaataattacaacatat--tgtgctaaaagctgtgatagaaTCAAGGATTTTGGGGATTTGTAAA----TAAAGTCAGGTTTGGAGATGATCTAAGTGAACGTG-----------------------------------------------------------------------------------------------------------------GGGAGGCAGAG-------GA-- i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1024168 145 - 1267912 ctgaagaaactcttgg-tttcagcgggaaacagtgaaataattacaacatac--tgtgctaaaagctgtgagagaagcaaggattttggggactggtaaa----taaagtcagttttggaggtgatctaagttaacgtg-----------------------------------------------------------------------------------------------------------------gggaggcagag-------ga-- i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 9264 143 + 8899380 ctcaagaagctcttggttttcagtgggaagcaatgaaataattacaatatatactgtgttaaatgctgtgatagaaACAATGATTTTGGGGCCTGGT--------AAGGTGAGTTTTGGAGATGACTGAAGTTAATGT------------------------------------------------------------------------------------------------------------------GGGAGACAGAA-------GA-- i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19622948 137 - 27850971 CTTAAGAAGCGCCTGG-TTGAGATCGGAAACAATAAAGTCATTATGTTATGT--CATGATAAATGCTGTGTTAGAAGCA--GAGTCTTAGAACTTG----------AAGTGAATTTTGGAGGTGACAAGAGTTAATGTT-----------------------------------------------------------------------------------------------------------------GTGAGACAAAG-------GA-- i otoGar3.GL873538 I 202 C 0 s canFam3.chr2 79072204 263 - 85426708 tttgagaagctcttgg--ttaaatggggtgaaataaaATAACTAGAGTATAC--CATGATCTATATTGTGATAGAAGCAAAGATTCTTGGAACCAGGCAACGTTTGAAGTGAGTTTGTAGAATGACTGCCGTTCATCTGTTGAAGAGGTAGAGGTCtattttatttttttaattttaCtttttaaaatttttatttttttgagagaaaacgagcgagcagaagagagagcacaagtggaggggagggacagagggagagggag-------aagc i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e cebCap1.NW_016107581v1 4403753 0 + 4432243 C e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=2660.000000 s hg38.chr3_KI270784v1_alt 158948 1 + 184404 -G s panTro5.chr3 51944 1 - 202621043 -G i panTro5.chr3 C 0 C 0 s panPan2.chr3 46896 1 - 205426864 -G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 65455 1 + 508821 -G i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30256 1 - 85730 -g i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 50574 1 - 181584905 -g i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 46889 1 + 4899514 -g i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 45550 1 + 97742 -G i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3695880 1 - 108555830 -G i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 45874 1 + 85016 -G i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1024313 1 - 1267912 -g i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 9407 1 + 8899380 -G i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4403753 1 + 4432243 -G i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19623085 1 - 27850971 -G i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79072467 1 - 85426708 t- i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e aotNan1.NW_018507789v1 2496756 0 + 12154212 C e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=763430.000000 s hg38.chr3_KI270784v1_alt 158949 96 + 184404 GGGTGTTTGC-------------------------------------------------------------------AAG-------GCAG---------------------------TGTGTGGGAAAG----------------------------------CACAGAGGAGTGAAAAGGAAGGGACTGCTCCGCATTTA----CTTGCTATATTGTAAGTTT-----AA----GTTCATAG s panTro5.chr3 51945 96 - 202621043 GGGTGTTTGC-------------------------------------------------------------------AAG-------GCAG---------------------------TGTGTGGGAAAG----------------------------------CACAGAGGAGTGAAAAGGAAGGGACTGCTTTGCATTTA----CTTGTTATATTGTAAGTTT-----AA----GTTCATAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 46897 96 - 205426864 GGGTGTTTGC-------------------------------------------------------------------AAG-------GCAG---------------------------TGTGTGGGAAAG----------------------------------CACAGAGGAGTGAAAAGGAAGGGACTGCTTTGCATTTA----CTTGTTATATTGTAAGTTT-----AA----GTTCATAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 65456 96 + 508821 GGGTGTTTGC-------------------------------------------------------------------AAG-------GCAG---------------------------TGTGTGGGAAAG----------------------------------CACAGAGGAGTGAAAAGGAAGGGACTGCTTCACATTTA----CTTGCTATATTGTAAGTTT-----AA----GTTCATAG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30257 100 - 85730 gGGTGTTTGC-------------------------------------------------------------------AAG-------GCAG---------------------------TGTGTGGTAAAG----------------------------------CACAGAGGAGTGAAAAGGAAGGGACTGCTTTGCATTTACTTTCTTTCTATATTGTATGTTT-----AA----ATTCATAG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 50575 100 - 181584905 gGGTGTTTGC-------------------------------------------------------------------AAG-------GCAG---------------------------TGTGTGGTAAAG----------------------------------CACAGAGGAGTGAAAAGGAAGGGACTGCTTTGCATTTACTTTCTTTCTATATTGTATGTTT-----AA----ATTCATAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 46890 100 + 4899514 gGGTGTTTGC-------------------------------------------------------------------AAG-------GCAG---------------------------TGTGTGGTAAAG----------------------------------CACAGAGGAGTGAAAAGGAAGGGACTGCTTTGCATTTACTTTCTTTCTATATTGTATGTTT-----AA----ATTCATAG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 45551 100 + 97742 GGGTGTTTGC-------------------------------------------------------------------AAG-------GCAG---------------------------TGTGTGGTAAAG----------------------------------CACAGAGGAGTGAAAAGGAAGGGACTGCTTTGCATTTACTTTCTTTCTATATTGTATGTTT-----AA----ATTCATAG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3695881 100 - 108555830 GGGTGTTTGC-------------------------------------------------------------------AAG-------GCAG---------------------------TGTGTGGGAAAG----------------------------------CACAGAGGAGTGAAAAGGAAGGGACTGCTTTGCATTTACTTTCTTTCTATATTGTATGTTT-----AA----ATTCATAG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 45875 100 + 85016 GGGTGTTTGC-------------------------------------------------------------------AAG-------GCAG---------------------------TGTGTGGTAAAG----------------------------------CACAGAGGAGTGAAAAGGAAGGGACTGCTTTGCATTTACTTTCTTTCTATATTGTATGTTT-----AA----ATTCATAG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1024314 96 - 1267912 gGGTGTTTGC-------------------------------------------------------------------AAG-------GCAG---------------------------TGTGTGGTAAAG----------------------------------CACAGAGCAGTGAAAAGGAAGGGACTGCTTTGCATTTA----CTTTCTATATTGTATGTTT-----AA----ATTCATAG i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 9408 100 + 8899380 GGATGTTTGC-------------------------------------------------------------------AAG-------ACAG---------------------------TGTGTGGAAAAG----------------------------------CACAGAGGAGGGAGAAGGATGTGACGGCTTTGCATATACTTTCTTTGTATATTGTATGTTT-----AA----GTTCATAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4403754 100 + 4432243 GGGTGTTTGC-------------------------------------------------------------------AAG-------GCAG---------------------------TGTATGGGAAAG----------------------------------CACAGAGGAGGGAGAAGGAAGTGACTGCTTTGCATTTACTTTTTTTCTATATTGTATGTTT-----AA----GTTCATAG i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2496756 100 + 12154212 GGGTGTTTGC-------------------------------------------------------------------AAG-------GCAT---------------------------TGTATGGGAAAG----------------------------------CACAGAGGAGGGAGAAGGAAGTGACTGCTTTGCATTTACTTTTTTTCTATATTGTATGTTT-----AA----GTTCATGG i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19623086 112 - 27850971 ATGTGTTTCC-------------------------------------------------------------------AAGGGAAGGAGCAG---------------------------TGCATGGGAGAG----------------------------------CACAGAAGGGTGTAAAGGAAAGGACTGCTTTTTATTTG----CTTCCCATATTATTTATTTCCTACAAGTTTGTTCATAG i otoGar3.GL873538 C 0 I 386 s canFam3.chr2 79072468 217 - 85426708 ggctccttgctgcagagggagtccaaggtggggctccatcctgagaccctgggatcatgacctgagctcatgagctgaag-------gcagacacttgaccaactgagccacccaggctcccTGAGAAAGGAGTGTTCTAAAAAGAAGGAGAAGCTAGCAAAATCACAGAGGGATGAGAAGGAAGGGGCTATTTT-TATTT-----CTTTCTATAT-----GTTT-----AA----GTTTAGAG i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=26460.000000 s hg38.chr3_KI270784v1_alt 159045 3 + 184404 CAT s panTro5.chr3 52041 3 - 202621043 CAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 46993 3 - 205426864 CAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 65552 3 + 508821 CAT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30357 3 - 85730 CAT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 50675 3 - 181584905 CAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 46990 3 + 4899514 CAT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 45651 3 + 97742 CAT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3695981 3 - 108555830 CAT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 45975 3 + 85016 CAT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1024410 3 - 1267912 CAT i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 9508 3 + 8899380 CAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4403854 3 + 4432243 CAT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2496856 3 + 12154212 CAT i aotNan1.NW_018507789v1 C 0 C 0 s canFam3.chr2 79072685 3 - 85426708 GAT i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e otoGar3.GL873538 19623198 386 - 27850971 I e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=63075.000000 s hg38.chr3_KI270784v1_alt 159048 8 + 184404 CATATAGG s panTro5.chr3 52044 8 - 202621043 CATATAGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 46996 8 - 205426864 CATATAGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 65555 8 + 508821 CGTATAGG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30360 8 - 85730 CTTATAGG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 50678 8 - 181584905 CTTATAGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 46993 8 + 4899514 CTTATAGG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 45654 8 + 97742 CTTATAGG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3695984 8 - 108555830 CTTATAGG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 45978 8 + 85016 CTTATAGG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1024413 8 - 1267912 CTTATAGG i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 9511 8 + 8899380 CTTACAGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4403857 8 + 4432243 CTTATAGA i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2496859 8 + 12154212 CTTATAGA i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19623584 8 - 27850971 CACATAGA i otoGar3.GL873538 I 386 C 0 s canFam3.chr2 79072688 8 - 85426708 CATTTAGA i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1686864 9 - 2296528 I e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=1415316.000000 s hg38.chr3_KI270784v1_alt 159056 145 + 184404 AGATTTTT-AGTTCAATTGAGAAATATGTAATTTTGTGAATTGCACATTGTTTTTGCTTTCTTACAGGAGGGAAATACACCACTTTT-GCTTGCTGTAATTTGTAAGAGACAGTAAATGGTGGCATTTTTAGTGAAGAACCAGGCAA s panTro5.chr3 52052 145 - 202621043 AGATTTTT-AGTTCAGTTGAGAAATATGTAATTTTGTGAATTGTACATTGTTTTTGCTTTCTTACAGGAGGGAAATACACCACTTTT-GCTTGCTGTAATTTGTAAGAGACAGTAAATGGTGGCATTTTTAGTGAAGAACCAGGCAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 47004 145 - 205426864 AGATTTTT-AGTTCAATTGAGAAATATGTAATTTTGTGAATTGTACATTGTTTTTGCTTTCTTACAGGAGGGAAATACACCACTTTT-GCTTGCTGTAATTTGTAAGAGACAGTAAATGGTGGCATTTTTAGTGAAGAACCAGGCAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 65563 145 + 508821 AGATTTTT-AGTTCAATTGAGAAATATGTAATTTTGTGAATTGTACATTGTTTTTGCTTTCTTACAGGAGGGAAATACACCACTTTC-GCTTGCTGTAATTTGTAAGAGACAGTAAATGGTGGCATTTTTAGTGAAGAACCAGGCAA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30368 145 - 85730 AGATTTTT-AGTTCAGTTGAGAAATATGTAATTTTGTGAATTATAAATTGTTTTTGCTTTCTTACAGGAGGGAAGTACACCACTTTT-GCTTGCTATAATTTGTAAGAGACAGCAAATGGTGGAATTTTTAGTAAAGAACCAGGTAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 50686 145 - 181584905 AGATTTTT-AGTTCAGTTGAGAAATATGTAATTTTGTGAATTATAAATTGTTTTTGCTTTCTTACAGGAGGGAAGTACACCACTTTT-GCTTGCTATAATTTGTAAGAGACAGCAAATGGTGGAATTTTTAGTAAAGAACCAGGTAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 47001 145 + 4899514 AGATTTTT-AGTTCAGTTGAGAAATATGTAATTTTGTGAATTATAAATTGTTTTCGCTTTCTTACAGGAGGGAAATACACCACTTTT-GCTTGCTATAATTTGTAAGAGACAGCAAATGGTGGAATTTTTAGTAAAGAACCAGGTAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 45662 145 + 97742 AGATTTTT-AGTTCAGTTGAGAAATATGTAATTTTGTGAATTATAAATTGTTTTTGCTTTCTTACAGGAGGGAAATACACCACTTTT-GCTTGCTATAATTTGTAAGAGACAGCAAATGGTGGACTTTTTAGTAAAGAACCAGGTAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3695992 145 - 108555830 AGATTTTT-AGTTCAGTTGAGAAATATATAATTTTGTGATTTATAAATTGTTTTTGCTTTCTTACAGGAGGGAAACACTCCACTTTT-ATTTGCTATAAATTCTAGGAGACAGCAAATGGTGGAATTTTTATTGAAGAACCAGGCAA i chlSab2.chr12 C 0 I 1068 s manLeu1.NW_012101680v1 45986 145 + 85016 AGATTTTT-AGTTCAGTTGAGAAATATGTAATTTTGTGAATTATAAATTGTTTTTGCTTTCTTACAGGAGGGAAATACACCACTTTT-GCTTGCTATAATTTGTAAGAGACAGCAAATGGTGGACTTTTTAGTAAAGAACCAGGTAA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1024421 145 - 1267912 AGATTTTT-AGTTCAGTTGAGAAATATGTAATTTTGTGAATTATAAATTGTTTTTGCTTTCTTACAGGAGGGAAATACACCACTTTT-ACTTGCTATAATTTGTAAGAGACAGCAAATGGTGGAATTTTTAATAAAGAACCAGGTAA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 9519 145 + 8899380 AGATTTTT-AGTTCAGTTGAGAACTATGTAATTTTATGAATTATAAATTGTTTTTGCTTTCTCACAGGAGGGAAACACACCTCTTTT-GCTAGCTGTAATTTGCAAGAAACAGCAAATGGTGGAATTTTTGGTAAAAAATGGGGCAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4403865 145 + 4432243 AGATTTTT-AGTTCAGTTGAGAAATACGTAATTTTATAAATTATAAATTGTTTTTGCTTTCTTACAGGAGGGAAACACACCATTTTT-GCTTGCTATAGTTTGCAAGAGACAGCAAATGGTGGAATTTTTAGTGAAAAACCAGGCAA i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2496867 146 + 12154212 AGATTTTT-AGTTCAGTTGAGAAATATGTAATTTTACAAATTATAAATTGTTTTTGCTTTCTTACAGAAGGGAAACACACTATTTTTCGCTTGCTATAATTTGCAAGAGACAGCAAATGGTGGAATTTTTAGTGAAAAACCAGGCAA i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19623592 145 - 27850971 AAGTTTTTCAGTGCAGTTGGGAAAAATTTAATTTTGTGAACTATAAATTATTTTCA-TTCTTTACAGGCTGAACTCACACCAGTTTT-GCTTGCTGTAAATGGAAAAAAACAGAAAATGGTGGAATTTTTAGTACAGAACAAAGGAC i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79072696 145 - 85426708 AGTTTTAC-AATTCAGTATGCAAATATGTAATTTTGTAAATTATAAGTTGTTTTTGCACTTTTACAGGATGACCTGACACCACTTTT-AGTTGCTGTAAATGAAAACAAAGAGCAAATGGTGAAATTTTTAGTAGGAAAAGGAGCAA i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1686873 145 - 2296528 AGGTTTTA-ATTTTAGTTGAGAAAAAGATAATTTTGTAAATCATAAATTATTTTTACTAATTTACAGGATGACTTCACACCACTTTT-ACTTGCTGTAAGTGAAAACAAACAGCAAATGGTGGAATTTTTAGTAAAGAAAGAAGCAA i dasNov3.JH570393 I 9 C 0 e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=125237.000000 s hg38.chr3_KI270784v1_alt 159201 15 + 184404 GTGCACCTGCTGTTG s panTro5.chr3 52197 15 - 202621043 GTGCACCTGCTGTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 47149 15 - 205426864 GTGCACCTGCTGTTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 65708 15 + 508821 GTGCACATGCTGTTG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30513 15 - 85730 ATGTACATGCTGTTG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 50831 15 - 181584905 ATGTACATGCTGTTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 47146 15 + 4899514 ATGTACATGCTGTTG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 45807 15 + 97742 ATGTACATGCTGTTG i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 46131 15 + 85016 ATGTACATGCTGTTG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1024566 15 - 1267912 ATGTACATGCTGTTG i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 9664 15 + 8899380 ATGTACATGCAGTTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4404010 15 + 4432243 ATGTACATGCTGTTG i cebCap1.NW_016107581v1 C 0 I 1074 s aotNan1.NW_018507789v1 2497013 15 + 12154212 ATGTACATGCTGTTG i aotNan1.NW_018507789v1 C 0 I 1091 s otoGar3.GL873538 19623737 15 - 27850971 GTGTAAATGAAATTG i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79072841 15 - 85426708 ATATACTTGCAGTTG i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1687018 15 - 2296528 ATATACATGCAGTTG i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46470284 8193 - 47448759 M e chlSab2.chr12 3696137 1068 - 108555830 I e nomLeu3.chr11 155835 49227 - 123690457 I a score=18431.000000 s hg38.chr3_KI270784v1_alt 159216 3 + 184404 GTG s panTro5.chr3 52212 3 - 202621043 ATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 47164 3 - 205426864 ATG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 65723 3 + 508821 ATG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30528 3 - 85730 ATA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 50846 3 - 181584905 ATA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 47161 3 + 4899514 ATA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 45822 3 + 97742 ATA i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 46146 3 + 85016 ATA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1024581 3 - 1267912 ATA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 9679 3 + 8899380 ATA i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19623752 3 - 27850971 ATA i otoGar3.GL873538 C 0 I 1740 s canFam3.chr2 79072856 3 - 85426708 ATA i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1687033 3 - 2296528 ATA i dasNov3.JH570393 C 0 C 0 e aotNan1.NW_018507789v1 2497028 1091 + 12154212 I e cebCap1.NW_016107581v1 4404025 1074 + 4432243 I e calJac3.chr18 46470284 8193 - 47448759 M e chlSab2.chr12 3696137 1068 - 108555830 I e nomLeu3.chr11 155835 49227 - 123690457 I a score=8281.000000 s hg38.chr3_KI270784v1_alt 159219 1 + 184404 A s panTro5.chr3 52215 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 47167 1 - 205426864 A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 65726 1 + 508821 A i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30531 1 - 85730 A i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 50849 1 - 181584905 A i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 47164 1 + 4899514 A i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 45825 1 + 97742 A i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 46149 1 + 85016 A i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1024584 1 - 1267912 A i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 9682 1 + 8899380 A i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19625495 1 - 27850971 A i otoGar3.GL873538 I 1740 C 0 s canFam3.chr2 79072859 1 - 85426708 A i canFam3.chr2 C 0 I 1978 s dasNov3.JH570393 1687036 1 - 2296528 A i dasNov3.JH570393 C 0 I 1681 e aotNan1.NW_018507789v1 2497028 1091 + 12154212 I e cebCap1.NW_016107581v1 4404025 1074 + 4432243 I e calJac3.chr18 46470284 8193 - 47448759 M e chlSab2.chr12 3696137 1068 - 108555830 I e nomLeu3.chr11 155835 49227 - 123690457 I a score=9853.000000 s hg38.chr3_KI270784v1_alt 159220 2 + 184404 TT- s panTro5.chr3 52216 2 - 202621043 TT- i panTro5.chr3 C 0 C 0 s panPan2.chr3 47168 2 - 205426864 TT- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 65727 1 + 508821 -T- i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30532 2 - 85730 TT- i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 50850 2 - 181584905 TT- i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 47165 2 + 4899514 TT- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 45826 2 + 97742 TT- i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3697205 2 - 108555830 TT- i chlSab2.chr12 I 1068 C 0 s manLeu1.NW_012101680v1 46150 2 + 85016 TT- i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1024585 2 - 1267912 TT- i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 9683 2 + 8899380 TT- i saiBol1.JH378197 C 0 M 4856 s cebCap1.NW_016107581v1 4405099 2 + 4432243 TT- i cebCap1.NW_016107581v1 I 1074 C 0 s aotNan1.NW_018507789v1 2498119 2 + 12154212 TT- i aotNan1.NW_018507789v1 I 1091 C 0 s otoGar3.GL873538 19625496 2 - 27850971 -TG i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79072860 1978 - 85426708 I e dasNov3.JH570393 1687037 1681 - 2296528 I e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=70352.000000 s hg38.chr3_KI270784v1_alt 159222 10 + 184404 AGTCCATTGT- s panTro5.chr3 52218 10 - 202621043 AGTCCACTGT- i panTro5.chr3 C 0 C 0 s panPan2.chr3 47170 10 - 205426864 AGTCCACTGT- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 65728 10 + 508821 AGTCCACTTT- i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30534 10 - 85730 AGTCCACTTT- i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 50852 10 - 181584905 AGTCCACTTT- i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 47167 10 + 4899514 AGTCCACTTT- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 45828 10 + 97742 AGTCCACTTT- i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3697207 10 - 108555830 AGTCCACTTT- i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 46152 10 + 85016 AGTCCACTTT- i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1024587 10 - 1267912 AGTCCACTTT- i colAng1.NW_012116822v1 C 0 C 0 s cebCap1.NW_016107581v1 4405101 10 + 4432243 AGTCCACTTT- i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2498121 10 + 12154212 AGTCCACTTT- i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19625498 11 - 27850971 AGTCTACTTTA i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79072860 1978 - 85426708 I e dasNov3.JH570393 1687037 1681 - 2296528 I e calJac3.chr18 46470284 8193 - 47448759 M e saiBol1.JH378197 9685 4856 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=15947.000000 s hg38.chr3_KI270784v1_alt 159232 2 + 184404 TT s panTro5.chr3 52228 2 - 202621043 TT i panTro5.chr3 C 0 C 0 s panPan2.chr3 47180 2 - 205426864 TT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 65738 2 + 508821 TT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30544 2 - 85730 TT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 50862 2 - 181584905 TT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 47177 2 + 4899514 TT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 45838 2 + 97742 TT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3697217 2 - 108555830 TT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 46162 2 + 85016 TT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1024597 2 - 1267912 TT i colAng1.NW_012116822v1 C 0 C 0 s cebCap1.NW_016107581v1 4405111 2 + 4432243 TT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2498131 2 + 12154212 TT i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19625509 2 - 27850971 TC i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79074838 2 - 85426708 TC i canFam3.chr2 I 1978 C 0 e dasNov3.JH570393 1687037 1681 - 2296528 I e calJac3.chr18 46470284 8193 - 47448759 M e saiBol1.JH378197 9685 4856 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=641480.000000 s hg38.chr3_KI270784v1_alt 159234 74 + 184404 AGCCAGAAATCACACAG-----------------AAAGCTAGACTAGTT-AGAAGTAGCAATGAGTGCAAGATTCTT------------------TCAGGACTTTTAAAG s panTro5.chr3 52230 74 - 202621043 AGCCAGAAATCACACAG-----------------AAAGCTAGACTAGTT-AGAAGTAGCAATGAGTGCAAGATTCTT------------------TCAGGACTTTTAAAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 47182 74 - 205426864 AGCCAGAAATCACACAG-----------------AAAGCTAGACTAGTT-AGAAGTAGCAATGAGTGCAAGTTTCTT------------------TCAGGACTTTTAAAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 65740 74 + 508821 AGCCAGAAATCACACAG-----------------AAAGCTAGACTAGTT-AGAAGTAGCAATGAGTGCAAGATTCTT------------------TCAGGACTTTTAAAG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30546 74 - 85730 AGCCAGAAATCAAACAG-----------------AAAGCTAGACTAGTT-AGAAGTAGCAATGAGTGTAAGATTCTT------------------TCAGGACTTTTAAAG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 50864 74 - 181584905 AGCCAGAAATCAAACAG-----------------AAAGCTAGACTAGTT-AGAAGTAGCAATGAGTGTAAGATTCTT------------------TCAGGACTTTTAAAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 47179 74 + 4899514 AGCCAGAAATCAAACAG-----------------AAAGCTAGACTAGTT-AGAAGTAGCAATGAGTGTAAGATTCTT------------------TCAGGACTTTTAAAG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 45840 74 + 97742 AGCCAGAAATCAAACAG-----------------AAAGCTAGACTATTT-AGAAGTAGCAATGAGTGTAAGATTCTT------------------TCAGGACTTTTAAAG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3697219 74 - 108555830 AGCCAGAAATCAAACAG-----------------AAAGCTAGACTAGTT-AAAAGTAGCAATGAGTGCAAGATTCTT------------------TCAGAACCTTTGAAG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 46164 74 + 85016 AGCCAGAAATCAAACAG-----------------AAAGCTAGACTAGTT-AGAAGTAGCAATGAGTGTAAGATTCTT------------------TCAGGACTTTTAAAG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1024599 74 - 1267912 AACCAGAAATCAAACAG-----------------AAAGCTGGACTAGTT-AGAAGTAGCAATGAGTGTAAGATTCTT------------------TCAGGACTTTTAAAG i colAng1.NW_012116822v1 C 0 C 0 s cebCap1.NW_016107581v1 4405113 74 + 4432243 AGCCAGAAATCAAACAG-----------------AAAGCTAGGCTAGTT-AGAAGTAGCAGTGAGTGCAAGATTCTT------------------TCAGGACTTTTAAAA i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2498133 74 + 12154212 AGCCAGAAATCAAACAG-----------------AAAACTACATCAGTT-ATAAGTAGCAGTGAGTGCAAGATTCTT------------------TTGGGACTTTTAAAA i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19625511 80 - 27850971 AGCCAGAAATCCAGCAA-----------------AAGGCTAGACTTGTTAAAAAGTAGCAATGGATATAGGATTTTTTAAA-------------CTCAGGACTTTTAAAA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79074840 77 - 85426708 ACCCAGAAACAAAGCAA-----------------AAGGCTAGACTAGTT-AGGAGTAGCAATGGGTGCAGGATTCTTTATG--------------TCAGGACTCTTGAG- i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1688718 109 - 2296528 AGCCAGAAATTAAGCAAGAGGCAAAGTCCACTCTGAGGCTAGACTAGTT-AAAAGTAGCAGCAGATGCAGTATTCTTTATGGAAATAGGTATGTCTCAGGATTTTTAAGA i dasNov3.JH570393 I 1681 C 0 e calJac3.chr18 46470284 8193 - 47448759 M e saiBol1.JH378197 9685 4856 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=532514.000000 s hg38.chr3_KI270784v1_alt 159308 93 + 184404 ACCTTTATCCCCAGGGATCTCAG------TGTTCATTTTATTCCAAGtataac-ctt--atatataaccttatatGTGAGATATAAATAACGTCACAT-TTTT s panTro5.chr3 52304 93 - 202621043 ACCTTTATCCCTAGGGACCTCAG------TGTTCATTTTATTCCAAGCATAAC-CTT--ATATATAACCTTATATGTGAGATATAAATAGCGTCACAT-TTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 47256 93 - 205426864 ACCTTTATCCCTAGGGATCTCAG------TGTTCATTTTATTCCAAGCATAAC-CTT--ATATATAACCTTATATGTGAGATATAAATAGCGTCACAT-TTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 65814 93 + 508821 ACCTTTATCACTAGGGATCTCAG------TGTTCATTTTATTCCAAGtataac-ctt--atatataaccttatatGTGAGATATAAATAGCGTCACAT-TTTT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30620 82 - 85730 ACCTTTATCCTTAGGGATCTCAG------TGTTCATTTTATTCCAAGTATAAC-CTT--AC------------ATGtgagatataaatagtgtcacatctttt i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 50938 82 - 181584905 ACCTTTATCCTTAGGGATCTCAG------TGTTCATTTTATTCCAAGTATAAC-CTT--AC------------ATGTGAGATATAAATAGTGTCACATCTTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 47253 82 + 4899514 ACCTTTATCCTTAGGGATCTCAG------TGTTCATTTTATTCCAAGTATAAC-TTT--AC------------ATGtgagatataaatagtgtcacatctttt i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 45914 85 + 97742 ACTTTTATCCTTAGGGATCTCAG---TGTTGTTCATTTTATTCCAAGTATAAC-TTT--AC------------ATGtgagatataaatagtgtcacatctttt i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3697293 87 - 108555830 ACCTTTATCCCTAGGGATCTCAG---TGTTGTTCATTTCATTCCAAGTATTAC-CCTTGTT------------ATGTGAGACATAAATAATGTCACATCTTtt i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 46238 85 + 85016 ACTTTTATCCTTAGGGATCTCAG---TGTTGTTCATTTTATTCCAAGTATAAC-CTT--AC------------ATGTGAGATATAAATAGTGTCACATCTTTT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1024673 94 - 1267912 ACCTTTATCCTTAGGGATCTCAG---TATTGTTCATTTTATTCCAAGTATAAC-CTT--ACATGTGA---GATATGtgagatataaatagtgtcacatctttt i colAng1.NW_012116822v1 C 0 C 0 s cebCap1.NW_016107581v1 4405187 86 + 4432243 ACCTTTATCCCTAGGGATCTTGA---TGCTGTTCATTTTATTCCAAGTATAACTCCT--AT------------ATGtgagatataaatagtgtcacatctttt i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2498207 86 + 12154212 ACCTTTATCCCTAGGGATCTCAA---TGCTGTTCATTTTATTCCAAGTATAACCCCT--AT------------ATGtgagatataaatagtgtcacatctttt i aotNan1.NW_018507789v1 C 0 C 0 s canFam3.chr2 79074917 86 - 85426708 ACCTTTATCCTTAGGGATCCTCA---CTGTATCTGTTTCATTCCAACTATAAC-CCT--TC-----------Tgcgtggggtacacataatgttacatctggg i canFam3.chr2 C 0 I 166 s dasNov3.JH570393 1688827 88 - 2296528 CTTTTCATTCTTAATGAAATGAGAACTAACATCCGTTTCATTCCAAgtataac-cttt-at------------ccatgggattcaaatagggttacatcttt- i dasNov3.JH570393 C 0 C 0 e otoGar3.GL873538 19625591 0 - 27850971 C e calJac3.chr18 46470284 8193 - 47448759 M e saiBol1.JH378197 9685 4856 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=6730.000000 s hg38.chr3_KI270784v1_alt 159401 13 + 184404 ACTTGTTTTTCT------T s panTro5.chr3 52397 13 - 202621043 ACTTGTTTTTCT------T i panTro5.chr3 C 0 C 0 s panPan2.chr3 47349 13 - 205426864 ACTTGTTTTTCT------T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 65907 13 + 508821 ACTTGTTTTTCT------T i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30702 5 - 85730 actt--------------t i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 51020 5 - 181584905 ACTT--------------T i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 47335 5 + 4899514 actt--------------t i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 45999 5 + 97742 actt--------------t i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3697380 19 - 108555830 actttctttttttctttct i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 46323 5 + 85016 ACTT--------------T i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1024767 5 - 1267912 actt--------------t i colAng1.NW_012116822v1 C 0 C 0 s cebCap1.NW_016107581v1 4405273 11 + 4432243 actt--tttttt------c i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2498293 11 + 12154212 acat--tttttc------t i aotNan1.NW_018507789v1 C 0 C 0 e canFam3.chr2 79075003 166 - 85426708 I e dasNov3.JH570393 1688915 0 - 2296528 C e otoGar3.GL873538 19625591 0 - 27850971 C e calJac3.chr18 46470284 8193 - 47448759 M e saiBol1.JH378197 9685 4856 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=423617.000000 s hg38.chr3_KI270784v1_alt 159414 72 + 184404 --TCTTTCttt---cttt--cttttttttt------tagacaaggtctcactatgttgcc---------------------------------------cacattcctgagctcaactgattct s panTro5.chr3 52410 70 - 202621043 --TCTTTCttt---cttt----tttttttt------tagacaaggtctcactatgttgcc---------------------------------------cacattcctgagctcaactgattct i panTro5.chr3 C 0 C 0 s panPan2.chr3 47362 69 - 205426864 --TCTTTCttt---ttt-----tttttttt------agtacaaggtctcactatgttgcc---------------------------------------cacattcctgagctcaactgattct i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 65920 74 + 508821 --TCTTTCTCt---tttttttttttttttt------tagacaaggtctcactatgttgcc---------------------------------------cacattcctgagctcaactgattct i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30707 71 - 85730 --tctttctttc--tttt----tttttttt------taaacaaggtctcactatgttgcc---------------------------------------cacattcctgagctcaacagattct i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 51025 73 - 181584905 --TCTTTCTTTCtttttt----tttttttt------taaacaaggtctcactatgttgcc---------------------------------------cacattcctgagctcaacagattct i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 47340 71 + 4899514 --tctttctttc--tttt----tttttttt------taaacaaggtcttactatgttgcc---------------------------------------cacattcctgagctcaacagattct i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 46004 70 + 97742 --tctttcttt---tttt----tttttttt------taaacaaggtctcactatgttgcc---------------------------------------cacattcctgagctcaacagattct i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3697399 70 - 108555830 --tctttcttt---tttt----tttttttt------taaacaaagtttcactatgttgcc---------------------------------------catgttcctgagctcaagtgattct i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 46328 69 + 85016 --TCTTTCttt---tttt----tttttttt------taaacaaggtctca-tatgttgcc---------------------------------------cacattcctgagctcaacagattct i manLeu1.NW_012101680v1 C 0 I 618 s colAng1.NW_012116822v1 1024772 66 - 1267912 --tcttt-------cttt----tttttttt------taaacaaggtctcactatgttgcc---------------------------------------cacattcctgagctcaacagattct i colAng1.NW_012116822v1 C 0 C 0 s cebCap1.NW_016107581v1 4405284 76 + 4432243 --ttttttttt---tttt----tttttttttttttggagacaaggtctcactatgttgcc---------------------------------------catgttcctgagctcaagtgattct i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2498304 70 + 12154212 --ttttttttt---tttt----cttttttt------gagaaaaggtctcactatgttgcc---------------------------------------catgttcctgagctctagtgattct i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19625591 111 - 27850971 CTTtttttttt---tttt----tttttttt------gagacagagcctcaagctgttaccctaggaagagtgctgtgggatcatagctcatagcaacctccaactcctgggctcaagcgattct i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79075003 166 - 85426708 I e dasNov3.JH570393 1688915 0 - 2296528 C e calJac3.chr18 46470284 8193 - 47448759 M e saiBol1.JH378197 9685 4856 + 8899380 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=136665.000000 s hg38.chr3_KI270784v1_alt 159486 22 + 184404 cctgcctcagcctcccaaactg s panTro5.chr3 52480 22 - 202621043 cctgcctcagcctcccaaactg i panTro5.chr3 C 0 C 0 s panPan2.chr3 47431 22 - 205426864 cctgcctcagcctcccaaactg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 65994 22 + 508821 cctgcctcaacctcccaaactg i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30778 22 - 85730 cctgcctcagcctcccaaactg i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 51098 22 - 181584905 cctgcctcagcctcccaaactg i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 47411 22 + 4899514 cctgcctcagcctcccaaactg i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 46074 22 + 97742 cccgcctcagcctcccaaactg i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3697469 19 - 108555830 cctgcctcggcctcgcaaa--- i chlSab2.chr12 C 0 C 0 s colAng1.NW_012116822v1 1024838 22 - 1267912 cttgcctcagcctcccaaactg i colAng1.NW_012116822v1 C 0 C 0 s cebCap1.NW_016107581v1 4405360 22 + 4432243 cctgcctcggcctcccaaactg i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2498374 22 + 12154212 cctgccttggcctcccaaactg i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19625702 22 - 27850971 cctgcctctgcctcccaagtag i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79075003 166 - 85426708 I e dasNov3.JH570393 1688915 0 - 2296528 C e calJac3.chr18 46470284 8193 - 47448759 M e saiBol1.JH378197 9685 4856 + 8899380 M e manLeu1.NW_012101680v1 46397 618 + 85016 I e nomLeu3.chr11 155835 49227 - 123690457 I a score=27116.000000 s hg38.chr3_KI270784v1_alt 159508 4 + 184404 ctag s panTro5.chr3 52502 4 - 202621043 ctag i panTro5.chr3 C 0 C 0 s panPan2.chr3 47453 4 - 205426864 ctag i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 66016 4 + 508821 ctag i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30800 4 - 85730 ctag i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 51120 4 - 181584905 ctag i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 47433 4 + 4899514 ctag i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 46096 4 + 97742 ctag i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3697488 2 - 108555830 --gG i chlSab2.chr12 C 0 C 0 s colAng1.NW_012116822v1 1024860 4 - 1267912 ctag i colAng1.NW_012116822v1 C 0 C 0 s cebCap1.NW_016107581v1 4405382 4 + 4432243 ctag i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2498396 4 + 12154212 ctag i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19625724 4 - 27850971 ctgg i otoGar3.GL873538 C 0 I 249 s canFam3.chr2 79075169 4 - 85426708 ccag i canFam3.chr2 I 166 C 0 e dasNov3.JH570393 1688915 0 - 2296528 C e calJac3.chr18 46470284 8193 - 47448759 M e saiBol1.JH378197 9685 4856 + 8899380 M e manLeu1.NW_012101680v1 46397 618 + 85016 I e nomLeu3.chr11 155835 49227 - 123690457 I a score=75604.000000 s hg38.chr3_KI270784v1_alt 159512 15 + 184404 ---acaccatgcctggcc s panTro5.chr3 52506 15 - 202621043 ---acaccatgcctggcc i panTro5.chr3 C 0 C 0 s panPan2.chr3 47457 15 - 205426864 ---acaccatgcctggcc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 66020 15 + 508821 ---acaccatgcctggcc i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30804 15 - 85730 ---ccaccatgcctggcc i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 51124 15 - 181584905 ---ccaccatgcctggcc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 47437 15 + 4899514 ---ccaccatgcctggcc i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 46100 15 + 97742 ---ccaccatgcctggcc i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3697490 15 - 108555830 ---CCACCATGGCTGGCC i chlSab2.chr12 C 0 C 0 s colAng1.NW_012116822v1 1024864 15 - 1267912 ---ccaccatgcctggcc i colAng1.NW_012116822v1 C 0 C 0 s cebCap1.NW_016107581v1 4405386 15 + 4432243 ---ccaccttgcctggcc i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2498400 15 + 12154212 ---ccaccttgcctggcc i aotNan1.NW_018507789v1 C 0 C 0 s canFam3.chr2 79075173 13 - 85426708 gcacctcattatc----- i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1688915 0 - 2296528 C e otoGar3.GL873538 19625728 249 - 27850971 I e calJac3.chr18 46470284 8193 - 47448759 M e saiBol1.JH378197 9685 4856 + 8899380 M e manLeu1.NW_012101680v1 46397 618 + 85016 I e nomLeu3.chr11 155835 49227 - 123690457 I a score=8281.000000 s hg38.chr3_KI270784v1_alt 159527 1 + 184404 T s panTro5.chr3 52521 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 47472 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 66035 1 + 508821 T i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30819 1 - 85730 t i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 51139 1 - 181584905 T i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 47452 1 + 4899514 t i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 46115 1 + 97742 t i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3697505 1 - 108555830 T i chlSab2.chr12 C 0 C 0 s colAng1.NW_012116822v1 1024879 1 - 1267912 t i colAng1.NW_012116822v1 C 0 C 0 s cebCap1.NW_016107581v1 4405401 1 + 4432243 t i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2498415 1 + 12154212 t i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19625977 1 - 27850971 T i otoGar3.GL873538 I 249 C 0 s canFam3.chr2 79075186 1 - 85426708 t i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1688915 0 - 2296528 C e calJac3.chr18 46470284 8193 - 47448759 M e saiBol1.JH378197 9685 4856 + 8899380 M e manLeu1.NW_012101680v1 46397 618 + 85016 I e nomLeu3.chr11 155835 49227 - 123690457 I a score=2056795.000000 s hg38.chr3_KI270784v1_alt 159528 332 + 184404 GACttttctaattagtta-tt-gggtcttgaaatgtcc---------------agtttagcagaaagtcttgga-ttgtcccctg-gggctatctcctatgccttcatcctttgaatttttcaaaaagctaa-ggggttccct-aagtccaaggaagacaatcttgctttacaagtcagaagataggggga-aaaggccattctaaatattct---gtttccattgattcact---tgtattgctgccattg-taactggtcctgcgatctggtaatgactaacctttgccaccaggatgcctttactgattcagacctct-cactcttt-gtggtgactcacacacagagttcacagctaca s panTro5.chr3 52522 332 - 202621043 GACttttctaattagtta-tt-gggtcttgaaatgtcc---------------agtttagcagaaagtcttgga-ttgttccctg-gggctatctcctatgccttcatcctttgaatttttcaaaaagctaa-ggggttccct-aagtccaaggaagacaatcttgctttacaagtcagaagataggggga-aaaggccattctaaatattct---gtttccattgattcact---tgtattgctgccattg-taactggtcctgcgatctggtaatgactaacctttgccaccaggttgcctttactgattcagacccct-cactcttc-gtagtgactcacacacagagttcacagctaca i panTro5.chr3 C 0 C 0 s panPan2.chr3 47473 332 - 205426864 GACttttctaattagtta-tt-gggtcttgaaatgtcc---------------agtttagcagaaagtcttgga-ttgttccctg-gggctatctcctatgccttcatcctttgaatttttcaaaaagctaa-ggggttccct-aagtccaaggaagacaatcttgctttacaagtcagaagataggggga-aaaggccattctaaatattct---gtttccattgattcact---tgtattgctgccattg-taactggtcctgcgatctggtaatgactaacctttgccaccaggctgcctttactgattcagacccct-cactcttc-gtagtgactcacacacagagttcacagctaca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 66036 321 + 508821 Gacttttctaattagtta-tt-gggtcttgaaatgtcc---------------agtttagcagaaagtcttgga-ttgtcccctg-gggctatctcctatgccttcatcctttgaatttttcaaaaagctaa-ggggttccct-aagtccaaggaagacaatcttgctttacaagtcagaagataggggga-aaaggccattctaaatattct---gtttccattgattcact---tgtattgctgccattg-taactggtcctgcaatctggtaatgactgacctttgccaccaggatgcctttcctgattcagacccct-cactcttc-atggtgactcacacacagagt----------- i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 30820 336 - 85730 ggcttttctaattagtca-tt-gggtcttgaaatgccc---------------agttaggc-gaaagtcttgca-ttgtcccctt-gggctatctcctatgccttcatcctttgaatttttcaaaaagctaa-ggggctccct-aagtccaaggaagacaatcttgctttacaagtcagaagattgggggagaaaggccattctaaacattctgtggtttccattgattcacttgctgtattgctgccatgg-taactggtcctgcaatctggtaatgattgacctttgccaccaggatggttttactgattcagacccct-cactcttc-gtggtgactcacacACA--GTTCACAGCTATG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 51140 336 - 181584905 GGCTTTTCTAATTAGTCA-TT-GGGTCTTGAAATGCCC---------------AGTTAGGC-GAAAGTCTTGCA-TTGTCCCCTT-GGGCTATCTCCTATGCCTTCATCCTTTGAATTTTTCAAAAAGCTAA-GGGGTTCCCT-AAGTCCAAGGAAGACAATCTTGCTTTACAAGTCAGAAGATTGGGGGAGAAAGGCCATTCTAAACATTCTGTGGTTTCCATTGATTCACTTGCTGTATTGCTGCCATGG-TAACTGGTCCTGCAATCTGGTAATGATTGACCTTTGCCACCAGGATGGTTTTACTGATTCAGACCCCT-CACTCTTC-GTGGTGACTCACACACA--GTTCACAGCTATG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 47453 336 + 4899514 ggcttttctaattagtca-tt-gggtcttgaaatgccc---------------agttaggc-gaaagtcttgca-ttgtcccctt-gggctatctcctatgccttcatcctttgaatttttcaaaaagctaa-ggggttccct-aagtccaaggaagacaatcttgctttacaagtcagaagattgggggagaaaggccattctaaacattctgtggtttccattgattcacttgctgtattgctgccatgg-taactggtcctgcaatctggtaatgattgacctttgccaccaggatggttttactgattcagacccct-cactcttc-gtggtgactcacacACA--GTTCACAGCTATG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 46116 337 + 97742 ggcttttctaattagtta-tt-gggtcttgaaatgccc---------------agtttagcagaaagtcttgca-ttgtcccctg-gggctatctcctatgccttcatcctttgaatttttcaaaaagctaa-ggggttccct-aagtccaaggaagacaatcttgctttacaagtcagaagattgggggagaaaggccattctaaacattctgtggtttccattgattcacttgctgtattgctgccatgg-taactggtcctgcaatctggtaatgattgacctttgccaccaggatggttttactgattcagacccct-cactcttc-gtggtgactcacacaca--gttcacagctaca i cerAty1.NW_012005170v1 C 0 I 317 s chlSab2.chr12 3697506 339 - 108555830 GACtttccaaattaattg-tt-gggtcttgaaatgtcc---------------agtttagcagaaaatcttgtatttattccctg-gggctctctcttgtgccttcctcctttggatttttcaaaaagctaa-ggggtttcct-aagtccaaggaagacaatcttgctttacaagtcagaagaagggggga-aaaggccattctagtcattctgttgtttccattgattcacttcctgtattgctgccattg-taacttctcctgcaatctggtaatgattgacttttggcaccaggatgcccttactgattcagatccct-cactcttc-atgatgactcatacacagtgtccacagctaca i chlSab2.chr12 C 0 C 0 s colAng1.NW_012116822v1 1024880 337 - 1267912 gacttttctaattagtta-tt-gggtcttgaaatgtcc---------------agtttagcagaaagtcttgga-ttgtcccctg-gggctatctcctatgccttcatcctttgaatttttcaaaaagctaa-ggggttccct-aagtccaaggaagacaatcttgctttacaagtcagaagattgggaggcaaaggccattctaaacattctgtggtttccattgattcacttgctgtattgctgccatgg-taactggtcctgcaatctggtaatgattgacctttgccaccaggatggctttactgatttagacccct-cactcttc-gtggtgactcacacACA--GTTCACAGCTATG i colAng1.NW_012116822v1 C 0 C 0 s cebCap1.NW_016107581v1 4405402 331 + 4432243 gacttttctaattagtta-tt-gggtcttgaaatgtcc---------------ggtttagcagaaaatcttgta-ttttcctttg-gggctatctcctatgcctttctgctttgaatttttcaaacagctaa-ggggttttct-aagtccaaggaagacagtcttgctttacaagtcagaaga-aggggga-gaaatccactctaatcattccattgtttccattgattcgcttgctgtattgctttcattg-taactgatcctgcaatctggtaatgattgacctttgccaccaggatgcctttagtgattcaaattcct-cagtcttc-acagtgactcatacacagaattcaca------ i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2498416 330 + 12154212 gacttttctaagtagtta-tt-gggtcttgaaatgtcc---------------agtttagcagacaatcttgta-ttgtcttctg-gggctatctcctatgccattctgctttgaatttttcaaaaagctaa-ggagtttcct-aagtccaaggaagacagtcttgctttacaagtcagaaga-aggggga-gaaatccactctaatcattccattgtttccattgattcacttgctgttttgctttcattg-taactgatcctgcaatctgataatgattgacctttgccacca-gatgcctttagtgattcaaattcct-cagtcttt-atggtgacttatacacagaattcaca------ i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19625978 284 - 27850971 GATTTTTGTAATTAGTTA-TTGGGGTCTTGAAATGTCTACCTTAGTAGACAAGATTttagtagaaaatcttgta-ttagcccctgagagctgtctcctatatacatttcc-ttgaatttttcaagaacctaa-gggattccttaaagtcccaggaagacagtcttctttaacaagtcaagaga--gaggaa-aaaggacattctgatcattcttttgtttctgttgattgtattgctgcattatt---attg-aaagtggtcctgcagtgtggtaatgattgacctttgctatca-------------------------------------------------------------------- i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79075187 287 - 85426708 gttttttctaactagttacct-gtgtcttaagatgttc---------------agttcagtagaaaactctata-cttttccttgagggttatggcctatac-ttccccccttgaattttccaagaacataa-gggcttccct-aa-taccagagagacattcctccttcataagccatttgg-atggaaa-aaaggacatgctcatcattctgtggtttcctttgattctgttcctgcagcatcactattg-aaactggttctgcactctgatcatgattgacttttactcccaggatgcccttgctgat---------------------------------------------------- i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1688915 330 - 2296528 gatttttctaattaattattt-gagttttgaaatgtcc---------------aatttagcagaagatcctgta-tttccccttg-gggttatctcctacatctacctcc-ttgaattttctaagaactcgatggggtttact-aaatcaaaagaagacagtcctcttccacaagtcagagga--ggaaag-agaggacattccagt---------gtttcccctgcatctgttgttgcagtgttgctgttgaaaactggtcctacagtccggacacaattgacttttgccacaaggatgtccttgctgatctagatccttatagtcttcagtggtgac-cacacttagtcttcagggttaca i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46470284 8193 - 47448759 M e saiBol1.JH378197 9685 4856 + 8899380 M e manLeu1.NW_012101680v1 46397 618 + 85016 I e nomLeu3.chr11 155835 49227 - 123690457 I a score=125265.000000 s hg38.chr3_KI270784v1_alt 159860 43 + 184404 gtgatgcctttactgattcagacccttcagtctttgtggtgac s panTro5.chr3 52854 43 - 202621043 gtgatgcctttactgattcagacccctcactctttgtggtgac i panTro5.chr3 C 0 C 0 s panPan2.chr3 47805 43 - 205426864 gtgatgcctttactgattcagacccctcactctttgtggtgac i panPan2.chr3 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 31156 43 - 85730 GTGTTGCCTTTACTGACTCAGATCCCTCAGTCTTTGTGGTGAC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 51476 43 - 181584905 GTGTTGCCTTTACTGACTTAGATCCCTCAGTCTTTGTGGTGAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 47789 43 + 4899514 GTGTTGCCTTTACTGACTCAGATCCCTCAGTCTTTATGGTGAC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 46770 42 + 97742 GTGATGCCTTTACTGACTCAGATCCCTCACTCTTCGT-GTGAC i cerAty1.NW_012005170v1 I 317 C 0 s manLeu1.NW_012101680v1 47015 42 + 85016 GTGATGCCTTTACTGACTCAGATCCCTCACTCTTCGT-GTGAC i manLeu1.NW_012101680v1 I 618 C 0 s colAng1.NW_012116822v1 1025217 43 - 1267912 GTGTTACCTTTACTGACTCAGATCCCTCAGTCTTCGTGATGAC i colAng1.NW_012116822v1 C 0 I 373 s otoGar3.GL873538 19626262 35 - 27850971 -tgatgtccttactgatttagatcccttagtcttcg------- i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79075474 26 - 85426708 -------cttcatt----------cctcagtcctcatggtgat i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1689245 5 - 2296528 ------------------------------tcttt-------- i dasNov3.JH570393 C 0 C 0 e aotNan1.NW_018507789v1 2498746 0 + 12154212 C e cebCap1.NW_016107581v1 4405733 0 + 4432243 C e calJac3.chr18 46470284 8193 - 47448759 M e saiBol1.JH378197 9685 4856 + 8899380 M e chlSab2.chr12 3697845 0 - 108555830 C e nomLeu3.chr11 155835 49227 - 123690457 I e gorGor5.CYUI01015884v1 66357 0 + 508821 C a score=25175.000000 s hg38.chr3_KI270784v1_alt 159903 7 + 184404 tcacaca s panTro5.chr3 52897 7 - 202621043 tcacaca i panTro5.chr3 C 0 C 0 s panPan2.chr3 47848 7 - 205426864 tcacaca i panPan2.chr3 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 31199 7 - 85730 TCACACA i rheMac8.chrUn_NW_014858614v1 C 0 I 397 s macFas5.chr6 51519 7 - 181584905 TCACACA i macFas5.chr6 C 0 I 386 s macNem1.NW_012020287v1 47832 7 + 4899514 TCACACA i macNem1.NW_012020287v1 C 0 I 384 s cerAty1.NW_012005170v1 46812 7 + 97742 TCACACG i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 47057 7 + 85016 TCACACG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1025633 7 - 1267912 TCACACA i colAng1.NW_012116822v1 I 373 C 0 s canFam3.chr2 79075500 7 - 85426708 ccacact i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1689250 0 - 2296528 C e otoGar3.GL873538 19626297 0 - 27850971 C e aotNan1.NW_018507789v1 2498746 0 + 12154212 C e cebCap1.NW_016107581v1 4405733 0 + 4432243 C e calJac3.chr18 46470284 8193 - 47448759 M e saiBol1.JH378197 9685 4856 + 8899380 M e chlSab2.chr12 3697845 0 - 108555830 C e nomLeu3.chr11 155835 49227 - 123690457 I e gorGor5.CYUI01015884v1 66357 0 + 508821 C a score=42067.000000 s hg38.chr3_KI270784v1_alt 159910 11 + 184404 caaagctcaca s panTro5.chr3 52904 11 - 202621043 caaagctcaca i panTro5.chr3 C 0 C 0 s panPan2.chr3 47855 11 - 205426864 caaagctcaca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 66357 5 + 508821 ------tcaca i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 31603 11 - 85730 CAAAGCTCACA i rheMac8.chrUn_NW_014858614v1 I 397 C 0 s macFas5.chr6 51912 11 - 181584905 CAAAGCTCACA i macFas5.chr6 I 386 C 0 s macNem1.NW_012020287v1 48223 11 + 4899514 CAAAGCTCACA i macNem1.NW_012020287v1 I 384 C 0 s cerAty1.NW_012005170v1 46819 11 + 97742 CAAAGCTCACA i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 47064 11 + 85016 CAAAGCTCACA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1025640 11 - 1267912 CAAAGCTCACA i colAng1.NW_012116822v1 C 0 C 0 s otoGar3.GL873538 19626297 8 - 27850971 ---actttaga i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79075507 11 - 85426708 tagacttcaaa i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1689250 0 - 2296528 C e aotNan1.NW_018507789v1 2498746 0 + 12154212 C e cebCap1.NW_016107581v1 4405733 0 + 4432243 C e calJac3.chr18 46470284 8193 - 47448759 M e saiBol1.JH378197 9685 4856 + 8899380 M e chlSab2.chr12 3697845 0 - 108555830 C e nomLeu3.chr11 155835 49227 - 123690457 I a score=1827831.000000 s hg38.chr3_KI270784v1_alt 159921 225 + 184404 gctacagtgttttttagttcatgtac-----------ata--------t---gctcagccGTTGTTC--------CCAGCACACTGCTCTGGCAGCG------AGGCCTCCTGGCTTTACCCAC---ACACATAGTGAGTAAATTGACC-CTCCCCTAACACT-----AAAAACCTTATTTGTTGCCCACCTCTTAGC-TAGGCTTAGCCTAGACCTTGATGGTAAGTTATCCTTTGAGACCTGTATTCATCTTTTCT-CTAGCAAATGTTA s panTro5.chr3 52915 225 - 202621043 gctacagtgttttttagttcatgtac-----------ata--------t---gctcagccGTTGTTC--------CCAGCACACTGCTCTGGCAGCG------AGGCCTCCTGGCTTTACCCAC---ACACATAGTGAGTAAATTGACC-CTCCCCTAACACT-----AAAAACCTTATTTGTTGCCCACCTCTTAGC-TAGGCTTAGCCTAGACCTTGATGGTAAGTTATCCTTTGAGACCTGTATTCATCTTTTCT-CTAGCAAATGTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 47866 225 - 205426864 gctacagtgttttttagttcatgtac-----------ata--------t---gctcagccGTTGTTC--------CCAGCACACTGCTCTGGCAGTG------AGGCCTCCTGGCTTTACCCAC---ACACATAGTGAGTAAATTGACC-CTCCCCTAACACT-----AAAAACCTTATTTGTTGCCCACCTCTTAGC-TAGGCTTAGCCTAGACCTTGATGGTAAGTTATCCTTTGAGACCTGTATTCATCTTTTCT-CTAGCAAATGTTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 66362 225 + 508821 gctacagtgttttttaattcatgtac-----------gta--------t---gctcagccaTTGTTC--------CCAGCACACTGCTCTGGCAGTG------AGGCCTCCTGGCTTTACCCAC---ACACATAGTGAGTAAATTGACC-CTCCCCTAACACT-----AAAAACCTTATTTGTTGCCCACCTCTTAGC-TAGGCTTAGCCTAGACCTTGATGGTACGTTATCCTTTGAGACCTGTATTCATCTTTTCT-CTAGCAAATGTTA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 31614 225 - 85730 GCCACTGTGTTTTTTAGTTCCTGTAC-----------ATA--------T---GTTCAGCCATTGTTC--------CCAGCACGCTGCTCCGCCAGCA------AGGCCTCCTGGCTTTATCCAC---ACACAGAGTAAGTAAAGCGACCCCTGCTGTAACACT-----AAAAACCTTATTTCTTGCCCACCTCTTAGC-TAGGCTGAGCCTAGACCCTGATGGTAAGTTATCCTTTGAGACCTGTGTTCATCTTTTCT-CTAGCAAAT-TCA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 51923 225 - 181584905 GCCACTGTGTTTTTTAGTTCCTGTAC-----------ATA--------T---GTTCAGCCATTGTTC--------CCAGCACGCTGCTCCGCCAGCA------AGGCCTCCTGGCTTTATCCAC---ACACAGAGTAAGTAAAGCGACCCCTGCTGTAACACT-----AAAAACCTTATTTCTTGCCCACCTCTTAGC-TAGGCTGAGCCTAGACCTTGATGGTAAGTTATCCTTTGAGACCTGTGTTCATCTTTTCT-CTAGCAAAT-TCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 48234 225 + 4899514 GCCACTGTGTTTTTTAGTTCCTGTAC-----------ATA--------T---GTTCAGCCATTGTTC--------CCAGCACGCTGCTCCGCCAGCA------AGGCCTCCTGGCTTTATCCAC---ACACAGAGTAAGTAAAGCGACCCCTGCTGTAACACT-----AAAAACCTTATTTCTTGCCCACCTCTTAGC-TAGGCTGAGCCTAGACCTTGATGGTAAGTTATCCTTTGAGACCTGTGTTCATCTTTTCT-CTAGCAAAT-TCA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 46830 225 + 97742 GCCACTGTGTTTTTTAGTTCCTGTAC-----------ATA--------T---GTTCAGCCATTGTTC--------CCAACACGCTGCTCCGCCAGCA------AGGCCTCCTGGCTTTACCCAC---ACACAGAGTAAGTAAAGCGACCCCTGCCATAACACT-----AAAAACCTTATTTCTTGCCCACCTCTTAGC-TAGGTTGAGCCTAGACCTTGATGGTAAGTTATCCTTTGAGACCTGTGTTCATCTTTTCT-CTAGCAAAT-TCA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3697845 220 - 108555830 ------gtgttttttagttcatgtac-----------ata--------g---gctcagccattgttc--------ccagcaccctgctgtggcagag------aggcctcctagctttacccac---acatgtagtgagtaaattgaccttttcccTAATACT-----AAAAACCTTATTTGTAGCCCGTGTCTTAGC-TCGGCCTAGCCTATGCCTTCATGGTATGTTATCCTTTGAGACCAGTGTCCATCTGTTCT-CTAGCAAATATTA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 47075 225 + 85016 GCCACTGTGTTTTTTAGTTCCTGCAC-----------ATA--------T---GTTCAGCCATTGTTC--------CCAGCACGCTGCTCCGCCAGCA------AGGCCTCCTGGCTTTACCCAC---ACACAGAGTAAGTAAAGCGACCCCTGCCGTAACACT-----AAAAACCTTATTTCTTGCCCACCTCTTAGC-TAGGTTGAGCCTAGACCTTGATGGTAAGTTATCCTTTGAGACCTGTGTTCATCTTTTCT-CTAGCAAAT-TCA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1025651 225 - 1267912 GCCACAGTGTTTTTTAGTTCCTGTAC-----------ATA--------T---GTTCAGCCATTGTTC--------CCAGCACGCTGCTCTGCCAGCA------AGGCCTCCTGGCTTTACCCAC---ACACAGAGTAAGTAAAGCGACCCCTGCCGTAACACT-----AAAAACCTTATTTCTTGCCCACCTCTTAGC-TAGGCTTAGCCTAGACTTTGATAGTAAGTTATCCTTTGAGACCTGTGTTCATGTTTTCT-CTAGCAAAT-TCA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 14614 228 + 8899380 GCTACAGTGTTTTTTAATTCATGTAC-----------ATA--------T---ACTCAGTCAATGTTC--------CCAGCATTCTGCTCTGGCAGTG------AGGCCTCCTTGCTTTACCCACCAAACACATAGTGAGTAACTTGACC-CTCTGTCAAAACT-----AAAAACCTTGTTTGTAGCCCACCTCTTAGC-TAGGCTTAGCCTAGACCTTCATGGTAAGTTATCCTTTGAGACTTATGTTTGTCTTTTCT-CTAGCAAATATTA i saiBol1.JH378197 M 4856 C 0 s cebCap1.NW_016107581v1 4405733 230 + 4432243 gctacagtgttttttagttcatgtac-----------ata--------t---gctcagccaTTGTTC--------CCAGCACCCTGCTCTGGCAGTGAGGCCAAGGCCTCCAGGCTTTACCCAC---ACACATAGTGAGTAAATTGACC-CTCC-CCAACACT-----AAATATGTTATTTGTGGCCCACCTCTTAGC-TAGGCTTAGCCTAGACTTTCATGGTAAGTTATCCTTTGAGTCATGTGTTCATCTTTTCT-TTAGCAAGTATTA i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2498746 230 + 12154212 gctacagtgttttttagttcacgtac-----------ata--------t---gctcagccaTTGTTC--------CCAGCACCCTGCTCTGGCAGTGAGGCCAAGGCCTCCAGGCTTTACCCAC---ACACATAGTAAGTAAATTGACC-CTCT-CCAACATT-----AAATACCTTATTTGTGGCCCACCTCTTAGC-TAGGCTTAGCCTAGACCTTCATGGTAAGTTATCCTTTGAGTCATGTGTTCATCTTTTCT-TTAGCAAATATTA i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19626305 228 - 27850971 gttatagtgttttttagttcacatacataagatgcttata--------t---gctcagccaCTGCTCCCAAAGCACCAGCACCTTGTTCTGGCAGTT------GGGCCTCTTCACTTTAGCCAC---ACACATAGTGAGCAAAGTGACT-------------------GAAAACCTCACGTGGAG-CCACATCTCAACTTAGACTTAACCTAGACCTTCATGGGAAATTATGTTTTGAGGCCC---TTTGTCTTTTCT-CTAGTAAATATTA i otoGar3.GL873538 C 0 I 887 s canFam3.chr2 79075518 217 - 85426708 cttacaaccttttttagtttat-tac-----------atatgattatgt---gctcagctgctattc-caaagcaccggcgtgctgttctggcagct------gggactcctggctttagcccc---atac---------------accctttccttcacactc----aaaaaccttatgtggaaaccatatgttagc-----------ccagaccttcatgatgaattatcctttgaggattttgttcgtcttttctgctagcagatttta i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1689250 221 - 2296528 ----------ttttcagttcacatat-----------gct--------tatagctcagctcttgttt-ccagacaccagcaccctaccctggcagtt------gggtcttctagctttagttgt---acacatagtgagcaaaaggtta-ctcccccatctctcccttcaaaactttgtgtggagcccaccgttgagc-----------ccagatcgtcatggtgaatttccctttgagggcctagtttgccttttctgccagcagatatta i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=2072190.000000 s hg38.chr3_KI270784v1_alt 160146 257 + 184404 GTTGGGATTGTCTTCAGCAGTCAGGGACATTCAAATAATGTGGCAGGAAGAGATCAGAGGTCCCTTTCCCTTTTGTTATCACGTCTGTACCTTGAGGCTTTTTTCTGTCCTGTGTAGCAGCTT---TTGTTAGATAGCAGAAGGTTCCACATTATCCTGCAATAGAGTAGTGGGCACCAACTTGCAGTTGGCC-CCTCAAGTAACATGTTTCCATAACAACGAAAATCTCTCAGGCTACTTGCATCTCTACCCCAAGTTTT s panTro5.chr3 53140 257 - 202621043 GTTGGGATTGTCTTCAGCAGTCAGGGACATTCAAATAATGTGGCAGGAAGAGATCAGAGGTCCCTTTCCCTTTTGTTATCACGTCTGTACCTTGAGGCTTTTTTCTGTCCTGTGTAGCAGCTT---TTGTTAGATAGCAGAAGGTTCCACATTATCCTGCAATAGAGTAGTGGGCACCAATTTTCAGTTGGCC-CCTCAAGTAATGTGTTTCCATAACAACGAAAATCTCTCAGGCTACTTGCATCTCTACCTCAAGTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 48091 257 - 205426864 GTTGGGATTGTCTTCAGCAGTCAGGGACATTCAAATAATGTGGCAGGAAGAGATCAGAGGTCCCTTTCCCTTTTGTTATCACGTCTGTACCTCGAGGCTTTTTTCTGTCCTGTGTAGCAGCTT---TTGTTAGATAGCAGAAGGTTCCACATTATCCTGCAATAGAGTAGTGGGCACCAATTTTCAGTTGGCC-CCTCAAGTAATGTGTTTCCATAACAACGAAAATCTCTCAGGCTACTTGCATCTCTACCTCAAGTTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 66587 257 + 508821 GTTGGGATTGTCTTCAGCAGTCAGGGACATTCAAATAATGTGGCAGGAAGAGATCAGAGGTCCCTTTCCCTTTTGTTATCACATCTGTACCTTGAGGCTTTTTTATGTCCTGTGTAgcagctt---ttgttagatagcagaaggttccacattatcctgcaatagagtagtgggcaccaacttgcagttggcc-cctcaagtaatgtgtttccataacaacaaaaatctctcaggctacttgcatctctacctCAAGTTTT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 31839 257 - 85730 GTTGGGCTTGTTCTCAGCAGTCAGGGACGTTCAAATAATGTTGCAGGAAGATATCAGAGCTCCCTTTCCCTTTTGTTATCACATCTGTACCTTGAGGTTTTTTTCTGTCCGGTGTGGCAGCTT---TTGTTAGATAGCAGAAGGCTCCACATTATCCTTCAATAGAGTCGTGGGCACCAACTTGCAGTTGGCC-CCTCAAGTAATGTGTTTCCATAATAATGAAAATCTCTCAGGCTACTTGCATCTCTACTTCAAGTTTT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 52148 257 - 181584905 GTTGGGCTTGTTCTCAGCAGTCAGGGACGTTCAAATAATGTTGCAGGAAGAGATCAGAGCTCCCTTTCCCTTTTGTTATCACATCTGTACCTTGAGGTTTTTTTCTGTCCGGTGTGGCAGCTT---TTGTTAGATAGCAGAAGGCTCCACATTATCCTTCAATAGAGTCGTGGGCACCAACTTGCAGTTGGCC-CCTCAAGTAATGTGTTTCCATAATAATGAAAATCTCTCAGGCTACTTGCATCTCTACTTCAAGTTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 48459 257 + 4899514 GTTGGGCTTGTTCTCAGCAGTCAGGGACGTTCAAATAATGTTGCAGGAAGAGATCAGAGCTCCCTTTCCCTTTTGTTATCACATCTGTACCTTGAGGTTTTTTTCTGTCCGGTGTGGCAGCTT---TTGTTAGATAGCAGAAGGCTCCACATTATCCTTCAATAGAGTCGTGGGCACCAACTTGCAGTTGGCC-CCTCAAGTAATGTGTTTCCATAATAATGAAAATCTCTCAGGCTACTTGCATCTCTACTTCAAGTTTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 47055 245 + 97742 GTTGGGCTTGTTCTCAGCAGTCAGGGACGTTCAAATAATATTGCAGGAAGAGATCAGAGCTCCCTTTCCCTTTTGTTATCACATCTGTACCTTGAGGTTTTTTTCTGTCCGGTGTGGCAGCTT---TTGTTAGATAGCAGAAGGCTCCACATTATCCTTCAGTAGAGTAGTGGGCACCAACTTGCAGTTGGCC-CCTCAAGTAATGTGTTTCCATAATAATGAAAATCTCTCAGG------------CTACTTCAAGTTTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3698065 256 - 108555830 GTTGGA-TTGTACTCAACAGTCAGGGATGTTCAAATAATGTTGCAGGAAGAGATCAGAGCTCCCTTTCCCTTTTGTTATCACATCTGTACCTTGAGGTTTTTTTCTGTCTGGTGTGGCAGCTT---TTGTTAGATAGCAGAATGTTCCACATTATCCTTCAGTAGAGTAATGGGCACCAACTTGGAGTTGGCC-CCTCAAGTAATGTGTTTCCATAATAATGAAAATCTCTCAGGCTACTTGCATCTCTACTTCAAGTTTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 47300 245 + 85016 GTTGGGCTTGTTCTCAGCAGTCAGGGACGTTCAAATAATGTTGCAGGAAGAGATCAGAGCTCCCTTTCCCTTTTGTTATCACATCTGTACCTTGAGGTTTTTTTCTGTCCGGTGTGGCAGCTT---TTGTTAGATAGCAGAAGGCTCCACATTATCCTTCAATAGAGTCGTGGGCACCAACTTGCAGTTGGCC-CCTCAAGTAATGTGTTTCCATAATAATGAAAATCTCTCAGG------------CTACTTCAAGTTTT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1025876 255 - 1267912 GTTGGGCTTGTTCTCAGCAGTCAGAGATGTTCAAATAATGTTGCAGGAAGAGAGCAGAGCTCCCTTTCCCTTTTGTTATCACATCTGTACCTTGAGGCTTTTTTCTGTCCAGTGTAGCAGCTT---TTGTTAGATAGCAGAAGGCTCCACATTATCCTTCAAT--AGTCGTGGGCACCAACTTGCAGTTGGCC-CTGCAAGTAATGTGTTTCCATAATAACGAAAATCTCTCAGGCTACTTGCATCTCTACCTCAAGTCTT i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 14842 253 + 8899380 GTTGGAATTGTACTCAACAGTCAGGAACGTTCAAATAATGTTGCAGGAAGAGATCAGTGTTTCCATTCCCTTTTGTGATCACACCTGTACCTTGAGGCTTTTTGATGTCCTGTGTAGCAGCTT---TTGTTAGATAGCAGAAGGTTCCACATTATCCTGCAGTAGAGTAGTGGGCACCAACTTGCAGTTGGCC-C----AGGGGTCTGTTTCCATAATAATGAAAATCTGCCAGGATACTTGCATCTCTACCTCAAGTTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4405963 252 + 4432243 TTTGGGATTGTACTCAACAGTCAGGAATGTTCTAATAATGTTGTAGAAAGAGATCAGAGTTCCCTTTCCCTTTTGTTAT-----CTGTACCTTGAGACTTTCCTATGTCCTATGCAACAGCCT---TTGCGAGATAGCAGAAGGTTCCACGTTATCCTTCAATAAAGTAGTGGGCACCAACTTGCAGTTGGCC-CCTCGAGTGATCTGTTTCCATAATAATGAAAATCTCTCAGGATACTTGCATCTCTACCACAAGTTTT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2498976 254 + 12154212 GTTGGGATTGTACTCAACAGTCAGGAATGTTCTAATAATGTTGTAGGAAGAGATCAGAGTTCCCTTTCCCTTTTGTTATTACATCTGTACCTTGAGACTTTTCTATGTCCTGTGTAACAGCCT---TTGCGAGATAGCAGAAGGTTCCACATTATCCTTCAATAAAGTAGTGGGCACCAACTTGTAGTTGGCC-CCTCAAGTGATCTGTTTCC---ATAATGAAAATCTCTCAGGATACTTGCATCTCTACCACAAGtttt i aotNan1.NW_018507789v1 C 0 I 311 s otoGar3.GL873538 19627420 244 - 27850971 gTTATGATTCTTTTAAA----CAGAGAGGTTCAAATAATGTTGCA-----AAAGTGGTGATCTTTCTTCCCTT--CTACCAGATGTGTACC-AGAGGC-TCCTTATATCCTGTGTAGCCCCTT---TCCTTTG-TAGTGGCAGGTCCCATATTTTTCTTCCTTAGAGTAGTGGGTGGCAACTTAGGGTTGTCCGCCTTAAGTGATCTGTGTTCTTAGTAATAAAAATTTCCCAAGCTACTTGCATCTATACCTAAAAGTTT i otoGar3.GL873538 I 887 C 0 s canFam3.chr2 79075735 240 - 85426708 gttgtgaccattctaagctgttaaagacattcaaataatgCTACAGGAAGAGACTGGACTTTGCTTTCCCCCTTGTTCCTAGATCTATACCCCAAGCCTGCTTTAAATCCTGTGGAGTGCCTTTTCTTATTAGGTCATGGAAGGTCTCATATTGCCCTTCC-CAGAGTAGTGGGCATCACCTT---------T-CCTGAGAGGCCATgttttgggtataat----atctcattaaatcctcctctaacaaccttg------ i canFam3.chr2 C 0 I 5 s dasNov3.JH570393 1689471 186 - 2296528 gttgggatcattct-aactgtcatagaagttcaaataatcttgcaggaagagatcagagtttTCTTTCATCTTTGCTACTAAATCTGTATCCCCAGGACCCTTTA-ATTCTGTGATATACTCT---TTTTTAGGT---------------------------------------------------------C-CCTCAAGTGGCCTTTTTCC-----CATAAAAA-------AGTGACTTGCTTGGCCACCTCAACTTTT i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=381528.000000 s hg38.chr3_KI270784v1_alt 160403 44 + 184404 TAAAAT-------ATTTAAAAATTCTACCTCA-C-AGGAAGTCATTCAATAGA s panTro5.chr3 53397 44 - 202621043 TAAAAT-------ATTTAAAAATTCTACCTCA-C-AGGAAGTCATTCAATAGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 48348 44 - 205426864 TAAAAT-------ATTTAAAAATTCTACCTCA-C-AGGAAGTCATTCAATAGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 66844 44 + 508821 TTAAAT-------ATTTAAAAATTCTACCTCA-C-AGGAAGTCATTCAATAGA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 32096 44 - 85730 TAAAAT-------ATTTTAAAATTCTACCTCA-C-AGGAAGTCATTCAATAGA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 52405 44 - 181584905 TAAAAT-------ATTTTAAAATTCTACCTCA-C-AGGAAGTCATTCAATAGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 48716 44 + 4899514 TAAAAT-------ATTTTAAAATTCTACCTCA-C-AGGAAGTCATTCAATAGA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 47300 44 + 97742 TAAAAT-------ATTTTAAAATTCTACCTCA-C-AGGAAGTCATTCAATAGA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3698321 44 - 108555830 TAAAAT-------ATTTTAAAATTCTACCTCA-C-AGAAAGTCATTCAACAGA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 47545 44 + 85016 TTAAAT-------ATTTTAAAATTCTACCTCA-C-AGGAAGTCATTCAATAGA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1026131 44 - 1267912 TTAAAT-------ATTTTAAAATTCTACCTCA-C-AAGAAGTCATTCAATAGA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 15095 43 + 8899380 C-AAAT-------ACTTAAAAATTCTACCTCA-C-AGGAAGTCATTCAATACA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4406215 44 + 4432243 TAAAAT-------ACTCAAAAACTCTACCTCA-T-AGGAAATCATTCAGTAAA i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2499541 44 + 12154212 TAAAAT-------ACTTAAAAACTCTACTTCA-C-AGGAAGTCATTCAATAGA i aotNan1.NW_018507789v1 I 311 C 0 s otoGar3.GL873538 19627664 45 - 27850971 TGAAAT-------ATTTTCAAAGTCTATCTCACC-AGGAAGCCATTCAACAGA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79075980 43 - 85426708 taagac-------aat-aagattcctatttta-g-aggaagactttgactgga i canFam3.chr2 I 5 C 0 s dasNov3.JH570393 1689657 52 - 2296528 TGAAGCTGGCGTAATTTTCAAATAGTGTTTCA-CAAGGCAGCCATTCAGCAGA i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=678148.000000 s hg38.chr3_KI270784v1_alt 160447 83 + 184404 ATTATC-GTATATAAACTAGGTAATTTGGATTTAACAGAGCTAAGCCTCATCCATGACTCA-TGAGTATCCATGTATAAA-ACAGG s panTro5.chr3 53441 83 - 202621043 ATTATC-GTATATAAACTAGGTAATTTGGATTTAACAGAGCTAAGCCTCATCCATGACTCA-TGAGTATCCATGTATAAA-ACAGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 48392 83 - 205426864 ATTATC-GTATATAAACTAGGTAATTTGGATTTAACAGAGCTAAGCCTCATCCATGACTCA-TGAGTATCCATGTATAAA-ACAGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 66888 83 + 508821 ATTATC-ATATATAAACTAGGTAATTTGGATTTAACAGAGCTAAGCCTCATCCATGACTCA-TGAGTATCCATGTATAAA-ACAGG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 32140 83 - 85730 ATTCTCTGTATCTAAAGTAGGTAATTTGGATTTAACAGAGCTAAG-CTCATCCATGACTCA-TGAGTGTCCATGTATAAA-ACAGG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 52449 83 - 181584905 ATTCTCTGTATCTAAAGTAGGTAATTTGGATTTAACAGAGCTAAG-CTCATCCATGACTCA-TGAGTGTCCATGTATAAA-ACAGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 48760 83 + 4899514 ATTCTCTGTATCTAAAGTAGGTAATTTGGATTTAACAGAGCTAAG-CTCATCCATGACTCA-TGAGTGTCCATGTATAAA-ACAGG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 47344 83 + 97742 ATTCTCTGTATCTAAAGTAGGTAATTTGGATTTAACAGAGCTAAG-CTCATCCATGACTCA-TGAGTGTCCATGTATAAA-ACAGG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3698365 84 - 108555830 ATTCTCTGTATCTAAAGTAGGTAATTTGAATTTAACAGAGCTAAGCCTCATCCATGACTTT-TGAGTATCCGTGTATAAA-ACAGG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 47589 83 + 85016 ATTCTCTGTATCTAAAGTAGGTAATTTGGATTTAACAGAGCTAAG-CTCATCCATGACTCA-TGAGTGTCCATGTATAAA-ACAGG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1026175 83 - 1267912 ATTTTCTGTATCTAAAGTAGGTAATTTGGATTTAACAGAGCTAAG-CTCATCCATGACTCA-TGAGTATCTATGTATAAA-ACAGG i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 15138 84 + 8899380 ATTCTCTCTATCTGAAGTAGGTAAGTTGGATTTAACAGAGCTAAGCTTTATACATGACTCA-TGAGTATCCATGTATAAA-ACAGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4406259 84 + 4432243 ATTCTGTGTATCTAAAGTAGATAATTTCTATTTAACAGAGCTAAGCTTTATTCATGGCTCA-TGAGTACCCAGGTATAAA-ACAGG i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2499585 84 + 12154212 ATTCTGTGTATCTAAAGTAGGTAATTTCTATTTAACAGAGCTAAGCTTTATTCATGACTCA-TGAGTACCCATGTATAAA-ACAGG i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19627709 80 - 27850971 ATTCCTTGAATCTAAGGTAGGTTAGTTGGATTTAACAGAGCTAAG------CCATGACTTAGTCAGTATCCTTGTATAAATGCAGG i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1689709 84 - 2296528 GTTCTCTGAATCAATGATAGGTTGGTTGGACTAAAGAAAGCCAAGTCTCCTTCATGACACA-TCAGTATCCATGTACTAA-AGATG i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79076023 0 - 85426708 C e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=1695125.000000 s hg38.chr3_KI270784v1_alt 160530 223 + 184404 GCTTT-AtgcttgtttcagcagcgtatattctaagattggatcaacacagagcagataagcatggctgctgcctaaggatggcacacaaattcagcaagcattccacattttGCACAGTCCCCAGAAGGTCATTTGACTATTTGTTAACTAGCTCCAAGGAAACAGTGCAAGTCAGACCAAAACAGGAGACATCCAATATTGAAATTGTTGTTACTGTTAT---TAT--- s panTro5.chr3 53524 223 - 202621043 GCTTT-AtacttgtttcagcagcgtatattctaagattggatcaacacagagcagataagcatggctgctgcctaaggatggcacacaaattcagcaagcattccacattttGCACAGTCCCCAGAAGGTCATTTGACTATTTGTTAACTAGCTCCAAGGAAACAGTGCAAGTCAGACCAAAACAGGAGACATCCAATATTGAAATTGTTGTTACTGTTAT---TAT--- i panTro5.chr3 C 0 C 0 s panPan2.chr3 48475 223 - 205426864 GCTTT-AtacttgtttcagcagcgtatattctaagattggatcaacacagagcagataagcatggctgctgcctaaggatggcacacaaattcagcaagcattccacattttGCACAGTCCCCAGAAGGTCATTTGACTATTTGTTAACTAGCTCCAAGGAAACAGTGCAAGTCAGACCAAAACAGGAGACATCCAATATTGAAATTGTTGTTACTGTTAT---TAT--- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 66971 221 + 508821 GCTTT-ATACTTGTTTCAGCAGCGTATATTCTAAGATTGGATCAACACAGAGCAGATAAGCATCGCTGCTGCCTAAGGATGGCACACAAATTCAGCAAGCATTCCACATTTTGCACAGTCCCCAGAAGGTCATTTGACTATTTGTTAACTAGCTCCAAGGAAACAGTGCAAGTCAGACCAAAACAGGAA--ATCCAATATTGAAATTGTTGTTACTGTTAT---GAT--- i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 32223 223 - 85730 GCTTT-AtacttgtttcagcagcacatattctaagactggatcaatacagagcagataagcatggctgctgcctaaggatggcacacagattcagaaagcattccacattttGCACAGTCCCAAGAAGGTCATTTGACTATTTGTTAACTAGCTCCAAGGAAACAGTGCAAGTCAGACCAAAACAGGAGACATCTAATATTGAAATTGTTGTTACTGTTAT---TAT--- i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 52532 223 - 181584905 GCTTT-AtacttgtttcagcagcacatattctaagactggatcaatacagagcagataagcatggctgctgcctaaggatggcacacagattcagaaagcattccacattttGCACAGTCCCAAGAAGGTCATTTGACTATTTGTTAACTAGCTCCAAGGAAACAGTGCAAGTCAGACCAAAACAGGAGACATCTAATATTGAAATTGTTGTTACTGTTAT---TAT--- i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 48843 223 + 4899514 GCTTT-AtacttgtttcagcagcacatattctaagactggatcaatacagagcagataagcatggctgctgcctaaggatggcacacagattcagaaagcattccacattttGCACAGTCCCAAGAAGGTCATTTGACTATTTGTTAACTAGCTCCAAGGAAACAGTGCAAGTCAGACCAAAACAGGAGACATCTAATATTGAAATTGTTGTTACTGTTAT---TAT--- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 47427 218 + 97742 GCTTT-AtacttgtttcagcagcacatattctaagactggatcaatacagagcagataagcatggctgctgcctgaggatggcacacagattcagaaaacattccacatgttGCACAGTCCCAAGAAGGTCATTTGACTATTTGTTAACTAGCTCCAAGGAAACACTGCAAGT-----CAAAACAGGAGACATCCAATATTGAAATTGTTGTTACTGTTAT---TAT--- i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3698449 223 - 108555830 GCTTT-AtacttgtttcagcagcacatattctaaaattggatcaatacagaacagataagcatgcctgctgcctaaggatggcacacaaattcagaaagcattccatatGTTGCCTAGTCCCCAGAAGGTCATTTGACCATTTGTTAACTAGCTTCAAGGAAATAATGTGAGTCAAACCAAAACAAGAGTCACCTGATATGGAAATTGTTATTATGAACAT---TAT--- i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 47672 223 + 85016 GCTTT-AtacttgtttcagcagcacatattctaagactggatcaatacagagcagataagcatggctgctgcctgaggatggcacacagattcagaaaacattccacatGTTGCACAGTCCCAAGAAGGTCATTTGACTATTTGTTAACTAGCTCCAAGGAAACACTGCAAGTCAGACCAAAACAGGAGACATCCAATATTGAAATTGTTGTTACTGTTAT---TAT--- i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1026258 223 - 1267912 GCTTT-AtacttgtttcagcagcacatattctaagactggatcagtacagagcagataagcatggctgctgcctaaggatggcatacaaattcagaaagcatttcacattttGCACAGTCGCAAGAAGGTCATTTGACTATTTTTTAACTAGCTCCAAGGAAACAGTGCAAGTCAGACCAAAACAGGAGACATCCAATATTGAAATTGTTGTTACTGTTAT---TAT--- i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 15222 223 + 8899380 GCTTT-AtacctgtttcagcagtacatattttgatattgaatcaatacagaacagataagcatgcatgctgcctaaacatggcacacaaattcttaaagcgttccgtattttGCACAGTCCCCAGAATGTCATTTGACTATTTGTTAACTAGCTCCAGGGAAACAGTGTGAGTGAAATCAAAACGGGAGAAAACCAAAACTGAAATTGTTACTATTATCATCAT------ i saiBol1.JH378197 C 0 I 309 s cebCap1.NW_016107581v1 4406343 221 + 4432243 GCTTTAAtacttgtttcagtagcacatattctaaaattgaatcattacagaacagataagtatatctgctgcctagggatggcacacaaattcataaagcattccatatttGGCACAGTCCTCAGAATGTCATTTGACTATTTGTTAACTAGCACAAGGGAAATAGTATGAATCAAACCAAAACAGGAGACTCCCAATATTGAAATTGTTATTATTATTAT--------- i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2499669 221 + 12154212 GCTTTAAtacttgtttcagtagcacatattctaaaattccatcaatacagagcagataagcatatctgctgcccagggatggcacacaaattcataaagcattccatattttGCACAATCCCTAGAATGTCATTTGACTATTTGTTAACTAGCTCCAGGGAAACAATATGAATCAAACCAAAACAGGAGACTCCCAATATTGAAATTGTTATTATTATTAT--------- i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19627789 224 - 27850971 GCTTT-gcgcttgctttcgcagcacatatactaaaattggaacaatacagggaaggttagcatggtctccagaccaggatgacatgcaaacttgtgaagcattccatactttGTACAGTGCTT-GAATGTCATTTGACTATTTACTCACTGGTTCCAAGGAAACATTTTGAGCCAAAGTTAAACAAG-TATACCCAATATTGaaattatgatttttttttt---tactat i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79076023 0 - 85426708 C e dasNov3.JH570393 1689793 0 - 2296528 C e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=52786.000000 s hg38.chr3_KI270784v1_alt 160753 11 + 184404 AAAAGTATTCA---------------------------------------------------------------------------- s panTro5.chr3 53747 11 - 202621043 AAAAGTATTCA---------------------------------------------------------------------------- i panTro5.chr3 C 0 C 0 s panPan2.chr3 48698 11 - 205426864 AAAAGTATTCA---------------------------------------------------------------------------- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 67192 11 + 508821 AAAAGTATTCA---------------------------------------------------------------------------- i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 32446 11 - 85730 AAAAGTATTCA---------------------------------------------------------------------------- i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 52755 11 - 181584905 AAAAGTATTCA---------------------------------------------------------------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 49066 11 + 4899514 AAAAGTATTCA---------------------------------------------------------------------------- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 47645 11 + 97742 AAACGTATTCA---------------------------------------------------------------------------- i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3698672 11 - 108555830 AGAAGTATTCA---------------------------------------------------------------------------- i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 47895 11 + 85016 AAACGTATTCA---------------------------------------------------------------------------- i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1026481 11 - 1267912 AAAAGTATTCA---------------------------------------------------------------------------- i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 15754 11 + 8899380 aaTAGTATTCA---------------------------------------------------------------------------- i saiBol1.JH378197 I 309 C 0 s cebCap1.NW_016107581v1 4406564 11 + 4432243 AAAAGTATTCA---------------------------------------------------------------------------- i cebCap1.NW_016107581v1 C 0 I 317 s aotNan1.NW_018507789v1 2499890 11 + 12154212 AAAAGTATTCA---------------------------------------------------------------------------- i aotNan1.NW_018507789v1 C 0 I 317 s otoGar3.GL873538 19628013 87 - 27850971 aaaaatattttataaGGTGGTCTTTGAAATGAAAACAGAGAggctctgtgcctgtggctcaagcggctaaggcgccagccacataca i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79076023 0 - 85426708 C e dasNov3.JH570393 1689793 0 - 2296528 C e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=4923.000000 s hg38.chr3_KI270784v1_alt 160764 2 + 184404 -CG s panTro5.chr3 53758 2 - 202621043 -CG i panTro5.chr3 C 0 C 0 s panPan2.chr3 48709 2 - 205426864 -CG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 67203 2 + 508821 -CG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 32457 2 - 85730 -CG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 52766 2 - 181584905 -CG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 49077 2 + 4899514 -CG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 47656 2 + 97742 -CG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3698683 2 - 108555830 -TG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 47906 2 + 85016 -CG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1026492 2 - 1267912 -TG i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 15765 2 + 8899380 -TG i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19628100 2 - 27850971 cc- i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79076023 0 - 85426708 C e dasNov3.JH570393 1689793 0 - 2296528 C e aotNan1.NW_018507789v1 2499901 317 + 12154212 I e cebCap1.NW_016107581v1 4406575 317 + 4432243 I e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=87122.000000 s hg38.chr3_KI270784v1_alt 160766 9 + 184404 TAAGGTGAT s panTro5.chr3 53760 9 - 202621043 TAAGGTGAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 48711 9 - 205426864 TAAGGTGAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 67205 9 + 508821 TAAGGTGAT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 32459 9 - 85730 TAAGGTGAT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 52768 9 - 181584905 TAAGGTGAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 49079 9 + 4899514 TAAGGTGAT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 47658 9 + 97742 TAAGGTGAT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3698685 9 - 108555830 TAAGGTGAT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 47908 9 + 85016 TAAGGTGAT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1026494 9 - 1267912 TAAGGTGAT i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 15767 9 + 8899380 TAAGGTGAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4406892 9 + 4432243 TAAGGTGAT i cebCap1.NW_016107581v1 I 317 C 0 s aotNan1.NW_018507789v1 2500218 9 + 12154212 TAAGGTGAT i aotNan1.NW_018507789v1 I 317 C 0 s otoGar3.GL873538 19628102 9 - 27850971 taaggtggt i otoGar3.GL873538 C 0 I 139 e canFam3.chr2 79076023 0 - 85426708 C e dasNov3.JH570393 1689793 0 - 2296528 C e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=953314.000000 s hg38.chr3_KI270784v1_alt 160775 128 + 184404 CTGTG--------------------------------------------------------------------AAATGAGAACAGCGCTGAGTAACATATGGGATGTTACATGCAAACATGTTGTTAGTCCATGACTTGGAAATGAGGAAACGTCAACTTGCATCTCTTTCATGGAACC--GA-AAAACAAGACAAGC-A s panTro5.chr3 53769 128 - 202621043 CTGTG--------------------------------------------------------------------AAATGAGAACAGCGCTGAGTAACATATGGGATGTTACATGCAAACATGTTGTTAGTCCATGACTTGGAAATGAGGAAACGTCAACTTGCATCTCTTTCATGGAACC--GA-AAAACAAGACAAGC-A i panTro5.chr3 C 0 C 0 s panPan2.chr3 48720 128 - 205426864 CTGTG--------------------------------------------------------------------AAATGAGAACAGCGCTGAGTAACATATGGGATGTTACATGCAAACATGTTGTTAGTCCATGACTTGGAAATGAGGAAACGTCAACTTGCATCTCTTTCATGGAACC--GA-AAAACAAGACAAGC-A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 67214 128 + 508821 CTGTG--------------------------------------------------------------------AAATGAGAACAGCGCTGAGTAACATATGGGATGTTACATGCAAACATGTTGTTAGTCCATGACTTGGAAATGAGGAAACGTCAACTTGCATCTCTTTCATGGAACT--GA-AAAACAAGACAAGC-A i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 32468 124 - 85730 CTGTG--------------------------------------------------------------------AAATGAGAACAGCGCTGAG-----TATGGGATGTTACATGCAAATATGTTGTTAGTCCAAGACTTGGAAATGAGGAAACGTTAACTTGCATCTCTTTCATGGAACC--AA-AAAACAAGACAAGCCA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 52777 124 - 181584905 CTGTG--------------------------------------------------------------------AAATGAGAACAGCGCTGAG-----TATGGGATGTTACATGCAAATATGTTGTTAGTCCAAGACTTGGAAATGAGGAAACGTTAACTTGCATCTCTTTCATGGAACC--AA-AAAACAAGACAAGCCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 49088 124 + 4899514 CTGTG--------------------------------------------------------------------AAATGAGAACAGCGCTGAG-----TATGGGATGTTACATGCAAATATGTTGTTAGTCCAAGACTTGGAAATGAGGAAATGTTAACTTGCATCTCTTTCATGGAACC--AA-AAAACAAGACAAGCCA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 47667 124 + 97742 CTGTG--------------------------------------------------------------------AAATGAGAACAGCGCTGAG-----TATGGGATGTTACATGCAAATATGTTGTTAGTCCATGACTTGGAAATGAGGAAACGTTAACGTGCATCTCTTTCGTGGAACC--AA-AAAACAAGACAAGCCA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3698694 129 - 108555830 CTGTG--------------------------------------------------------------------AAATGAGAACAGAACTGAGTGGCATATGGGATGTTACATGCAAATATGTTGTTAGTACATGACTTGGAAATGAGGAAACATCAACTTGCATCTCTTTCATGGAACT--GA-AAAACAATACAAGCAA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 47917 124 + 85016 CTGTG--------------------------------------------------------------------AAATGAGAACAGCGCTGAG-----TATGGGATGTTACATGCAAATATGTTGTTAGTCCATGACTTGGAAATGAGGAAACGTTAACGTGCATCTCTTTCGTGGAACC--AA-AAAACAAGACAAGCCA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1026503 125 - 1267912 CTGTG--------------------------------------------------------------------AAATGAGAACAGCGCTGAG-----TATGGGATGTTACATGCAAATATGTTGTTAGTCCATGACTTGGAAATGAGGAAACGATAACTTGCATCTCTTTCATGGAACC-AAA-AAAACAAGACAAGCAA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 15776 129 + 8899380 CTGTG--------------------------------------------------------------------AAATGAGAACAGAACTGAGTAACATATGGGATGTTACGTGCAAATATGTTGTTAGTACATGACTTGGAAATGAGGAAACATCAACTTGCATCTCTTCCATGGAACT--GA-AAAACAATACAAGCAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4406901 128 + 4432243 CTGTG--------------------------------------------------------------------AAATAAGAACAGAACTGAGTAACATATGGGATGTTACATGCAAATATGTTCTTAGTACATGACTTGGAAATAAGGAAGCATCAACTTGCCTCTGTTTCATGGAACT--G--AAAACAATACAAGCCG i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2500227 130 + 12154212 CTGTG--------------------------------------------------------------------AAATGAGAACAGAGCTGAGTAACATATGGGATGTTACATGCAAATATGTTGTTAGTACATGACTTGGAAATAAGGAAACATCAACTTGCCTCTCTTTCATGGAACT--GAGAAAACAATACAAGCAG i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19628250 197 - 27850971 ctgtgaagccacggcgctctatccagggggacagcttgaggctctgtctcaaaaaaaaaaaacaaaaaaaAACAAATGAAAACAGAGCTGAGTAACACATGGGCTATTCCATGCAAATATATTGTAAGTACATATCTTGCACATGAGAAAATGCCATCTTACATCTCTTGTGTAGAACTTAAA-AAAATAAGAATAGT-- i otoGar3.GL873538 I 139 C 0 e canFam3.chr2 79076023 0 - 85426708 C e dasNov3.JH570393 1689793 0 - 2296528 C e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=4602759.000000 s hg38.chr3_KI270784v1_alt 160903 530 + 184404 GGTTTTGTCTTGTATGTCAGTTGGAGAGGACCAAGAAGAC---GCAG-C----CTCTAACACAGACCTGCTGGCTCTGAGTTTGAGGAGGTAGAGAAGGAATGGTAGTTGTCCAAGCCAGGTTTTGATATTTATTAGTTTTCTGCCCTTGGTGTGATTGATGAGCT-CAGTAATAGGGAACAATTAGGTAATCTATTTTAATGAGATAATAATATATTTAT-ATATAAATTTAGTTACAAGTTATGAATTAGCTAAAATGCTCTG-AACTACAAGCCACAATGAATAG---AACTAATAACCAAAATTAGCACTTAATAACATTTTCTGAAAACTGTGACATTCAAATATTAGAACCTATG-AAAAAACACCCATCAGGT----TTTGAGATTCCAAAATTGTTTCAGCAATACAGTTCAAGAATAAATTATTCCATTGCTTTACTATTTCTCTGAA-TA----tttaaacatgttatctcattacatcctcctaacagcctagtgaagtaaggtagtaaaatccttattttttagaaaaagccatggagccta s panTro5.chr3 53897 530 - 202621043 GGTTTTGTCTTGTATGTCAGTTGGAGAGGACCAAGAAGAT---GCAG-C----CTCTAACACAGACCTGCTGGCTCCGAGTTTGAGGAGGTAGAGAAGGAATGGTAGTTGTCCAAGCCAGGTTTTGATATTTATTAGTTTTCTGCCCTTGGTGTGATTGATGAGCT-CAGTAATAGGGAACAATTAGGTAATCTATTTTAATGAGATAATAATATATTTAT-ATATAAATTTAGTTACAAGTTATGAATTAGCTAAAATGCTCTG-AACTACAAGCCACAATGAATAG---AACTAATAACCAAAATTAGCACTTAATAACATTTTCTGAAAACTGTGACATTCAAATATTAGAACCTATG-AAAAAACACCCATCAGGT----TTTGAGATTCCAAAATTGTTTCAGCAATACAGTTCAAGAATAAATTATTCCATTGCTTTACTATTTCTCTGAA-TA----tttaaacatgttatctcattacatcctcctaacagcctagtgaagtgaggtagtaaaatccttattttttagaaaaagccatggagccta i panTro5.chr3 C 0 C 0 s panPan2.chr3 48848 530 - 205426864 GGTTTTGTCTTGTATGTCAGTTGGAGAGGACCAAGAAGAT---GCAG-C----CTCTAACACAGACCTGCTGGCTCCGAGTTTGAGGAGGTAGAGAAGGAATGGTAGTTGTCCAAGCCAGGTTTTGATATTTATTAGTTTTCTGCCCTTGGTGTGATTGATGAGCT-CAGTAATAGGGAACAATTAGGTAATCTATTTTAATGAGATAATAATATATTTAT-ATATAAATTTAGTTACAAGTTATGAATTAGCTAAAATGCTCTG-AACTACAAGCCACAATGAATAG---AACTAATAACCAAAATTAGCACTTAATAACATTTTCTGAAAACTGTGACATTCAAATATTAGAACCTATG-AAAAAACACCCATCAGGT----TTTGAGATTCCAAAATTGTTTCAGCAATACAGTTCAAGAATAAATTATTCCATTGCTTTACTATTTCTCTGAA-TA----tttaaacatgttatctcattacatcctcctaacagcctagtgaagtgaggtagtaaaatccttattttttagaaaaagccatggagccta i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 67342 529 + 508821 GGTTTTGTCTTGTATGTCAGTTGGAGAGGACCAAGAAGAT---GCAG-C----CTCTAACACAGACCTGCTGGCTCCGAGTTTGAGGAGGTAGAGAAGGAATGGTACTTGTCCAAGCCAGGTTTTGATATTTATTAGTTTTCTGCCCTTGGTGTGATTGATGAGCT-CAGTAATAGGGAACAATTAGGTAATCTATTTTAATGAGATAATAATATATTTAT-ATATAAATTTAGTTACAAGTTATGAATTAGCTAAAATGCTCTG-AACTACAAGCCACAATGAATAG---AATTAATAACCAAAATTAGCACTTAATAACATTTTCTGAAAACTGTGACATTCAAATATTAGAACCTATG-AAAAAACACCCATCAGGT----TTTGAGATTCCAAAATTGTTTCAGCAATACATTTCAAG-ATAAATTATTCCATTGCTTTACTATTTCTCTGAA-TA----tttaaacatgttatctcattacatcctcctaacagcctagtgaagtaaggtagtaaaatccttattttttagaaaaagccatggagccta i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 32592 530 - 85730 GGTTTTGTCTTGTATGTCAGTTGGAGAGGACCAAGAAGAT---GCAG-C----CTCTAACACAGACCTGCTGGCTCTGAGTTTGAGGAAGTAGAGAAGGAATGGTAGTTGTCCAAGCCAGGTTTTGACATTTATGAGTTTTCTGCCCTTGGTATGATTGATGAGCT-CAGGAATAGTGAACAATTAGGTAATCTATTTTAATGAGATAATAATATATTTAT-ATATAAATTTAGTTACAAGTTATGAATTAGCTAAAATGCCCTG-AACTACAAGCCACAATGAATAG---AACTGATAACCAAAATTAGCACTTAGTAACATTTTCTGAAAACTGTGACATTCAAATATTAGAACCTATG-AAAAAACGCCCATCAGGT----TTTGAGATTCCAAAATTGTTTCAGCAATACAGTTCAAGAATAAATTATTCCATTGCTTTACTATTTCTCTGAA-TA----tttaaacatgttatctcattatattctcctaacaacctagtgaagtaaggtagtaaaatccttatttttttgaaaaagccatggagccta i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 52901 530 - 181584905 GGTTTTGTCTTGTATGTCAGTTGGAGAGGACCAAGAAGAT---GCGG-C----CTCTAACACAGACCTGCTGGCTCTGAGTTTGAGGAAGTAGAGAAGGAATGGTAGTTGTCCAAGCCAGGTTTTGACATTTATGAGTTTTCTGCCCTTGGTATGATTGATGAGCT-CAGGAATAGTGAACAATTAGGTAATCTATTTTAATGAGATAATAATATATTTAT-ATATAAATTTAGTTACAAGTTATGAATTAGCTAAAATGCCCTG-AACTACAAGCCACAATGAATAG---AACTGATAACCAAAATTAGCACTTAGTAACATTTTCTGAAAACTGTGACATTCAAATATTAGAACCTATG-AAAAAACGCCCATCAGGT----TTTGAGATTCCAAAATTGTTTCAGCAATACAGTTCAAGAATAAATTATTCCATTGCTTTACTATTTCTCTGAA-TA----TTTAAacatgttatctcattatattctcctaacaacctagtgaagtaaggtagtaaaatccttatttttttgaaaaagccatggagccta i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 49212 530 + 4899514 GGTTTTGTCTTGTATGTCAGTTGGAGAGGACCAAGAAGAT---GCAG-C----CTCTAACACAGACCTGCTGGCTCTGAGTTTGAGGAAGTAGAGAAGGAATGGTAGTTGTCCAAGTCAGGTTTTGACATTTATGAGTTTTCTGCCCTTGGTATGATTGATGAGCT-CAGGAATAGTGAACAATTAGGTAATCTATTTTAATGAGATAATAATATATTTAT-ATATAAATTTAGTTACAAGTTATGAATTAGCTAAAATGCCCTG-AACTACAAGCCACAATGAATAG---AACTGATAACCAAAATTAGCACTTAGTAACATTTTCTGAAAACTGTGACATTCAAATATTAGAACCTATG-AAAAAACGCCCATCAGGT----TTTGAGATTCCAAAATTGTTTCAGCAATACAGTTCAAGAATAAATTATTCCATTGCTTTACTATTTCTCTGAA-TA----tttaaacatgttatctcattatattctcctaacaacctagtgaagtaaggtagtaaaatccttatttttttgaaaaagctatggagccta i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 47791 531 + 97742 GGTTTTGTCTTGTATGTCAGTTGGAGAGGACCAAGAAGAT---GCAG-C----CTCTAACACAGACCTGCTGCCTCTGAGTTTGAGGAAGTAGAGAAGGAATGGTAGTTGTCCAAGTCAGGTTTTGACATTTATGAGTTTTCTGCCCTTGGTGTGATTGATGAGCT-CAGGAATAGTGAACAATTAGGTAATCTATTTTAATGAGATAATAATATATTTAT-ATATAAATTTAGTTACAAGTTATGAATTAGCTAAAATGCCCTG-AACTACAAGCCACAATGAATAG---AACTGATAACCAAAATTAGCACTTAGTAACATTTTCTGAAAACTGTGACATTCAAATATTAGAACCTATGAAAAAAACGCCCATCAGGT----TTTGAGATTCCAAAATTGTTTCAGCAATACAGTTCAAGAATAAATTATTCCATTGCTTTACTATTTCTCTGAA-TA----TTTAAacatgttatctcattatattctcctaacaacctagtgaagtaaggtagtaaaatccttatttttttgaaaaagccatggagccta i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3698823 534 - 108555830 GGCTTTATCTTGTGTGTCAGTCGGAGAGGACCCAGAAGAT---GCAG-C----CTCTAACACAGACCTTCTGACTCTGAGTTTGAGGAGGTAGAGAAGGAATGGTAGTTGTCCCAGCCAGGTTTTGACATCTATTAGTTTTCTGCCCTTGGTGTGATTGATGAGCT-CAGTAATAAGGGACAATTAGGTTATATGTTTTAATGAGACAATAATATATTTAT-ATATAAATTTAGTTACAAGTTATGAATTAGCTAAAATGCCCTG-AACTACAAGCCACAATGAATAG---AACTAATAACCAAAATTAACACTCAATAATATTCTCTGAAAACTGTGACATTCAAATATTAGAACCTATG-AAAAAACACTTGTCAGGTTTTATTTGAGATTCCAAAATTGTTCTAGCAATGCAGCTCAAGAATAAATTTTTCCATTGCTTTACTATTTCTCTGAA-CA----tttaaacatgttatctcattacatcctcctaacaacctagtgaagtcaagtagtaaaatctttgttttttagaagaagccacggaaccta i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 48041 531 + 85016 GGTTTTGTCTTGTATGTCAGTTGGAGAGGACCAAGAAGAT---GCAG-C----CTCTAACACAGACCTGCTGCCTCTGAGTTTGAGGAAGTAGAGAAGGAATGGTAGTTGTCCAAGTCAGGTTTTGACATTTATGAGTTTTCTGCCCTTGGTGTGATTGATGAGCT-CAGGAATAGTGAACAATTAGGTAATCTATTTTAATGAGATAATAATATATTTAT-ATATAAATTTAGTTACAAGTTATGAATTAGCTAAAATGCCCTG-AACTACAAGCCACAATGAATAG---AACTGATAACCAAAATTAGCACTTAGTAACATTTTCTGAAAACTGTGACATTCAAATATTAGAACCTATGAAAAAAACGCCCATCAGGT----TTTGAGATTCCAAAATTGTTTCAGCAATACAGTTCAAGAATAAATTATTCCATTGCTTTACTATTTCTCTGAA-TA----tttaaacatgttatctcattatattctcctaacaacctagtgaagtaaggtagtaaaatccttatttttttgaaaaagccatggagccta i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1026628 528 - 1267912 AGTTTTGTCTTGTATGTCAGTTGGAGAGGACCAAGAAGAT---GCAG-C----CTCTAACACAGACCTGCTGGCTCTGAGTTTGAGGAGGTAGAGAAGGAATGGTAGTTGTCCAAGTCAGGTTTTGACATTTATTAGTTTTCTGCCCTCGGTGTGATTGATGAGCT-CAGGAACAGTGAACAATTAGGTAATCTAGTTTAATGAGATAATAATATATTTAT-ATATAAATTTAGTTACAAGTTATGAATTAGCTAAAATGCTCTG-AACTACAAACCATAATGAATAG---AACTAATAACCAAAATTAGCACTTAGTAACATTTTCTGAAAACTGTGACATTCAAATATTAGAACCTATG-AAAAAACGCCCATCAGGT----TTTGAGATTCCAAAATTGTTTCAGCAATACAGTTCAAGAATAAATTATTCCATTGCTTTACTATTTCTCTGAA-TA----TTTAAac--gttatctcattacattctcctaacaacctagtgaggtaaggtagtaaaatctttattttttagaaaaagccatggagccta i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 15905 521 + 8899380 GGTTTTGTCTTATATGTCAGTTGGAGAGGACCATGAAGAT---CCAGCC----CTCTAACACAGATCTGCTGGCTAAGGGTTTGAGTAGACAGAGGAGAAATGGTACTTGTCCAAGACAGCTTTTGACATCTATTAG---TCTGCCCTTGGTGTGGTTGATGATCT-CAGTGATAGGGGACAATTAGGTAATCTATTTTAATGAGataata------atat-atataaatttaGTTACAAGTTATGGATTAGCTAAAATGCTCTG-AACTACAATCCACAATGAATAG---AACGAATAACCAAAATTAGCACTTAATAACATTTTCCGAAAACCATGACACTGAAATATTAGAACCTATA-AAAACGCACCCATCAGGT----GTTGAGATTTCAAAATTATTTCAGCAATGCACTTCAAGAGTAAACTGTTCCATTGCTTTACTATTTCTCTGAA-CA----tttaaacatgttatctcattatatcctacttacagcctagtgaagaaaggtagt-aaatccttattttttagaagaagccatggagccta i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4407029 519 + 4432243 GGTTTTGTCTTGTATGTCAGTTGGAGAGGACCAAGAAGAC---CCAGCC----CTCTAACA-----CTGCTGGCTCAGAGTTTGAGTAGACAGAGAAGAAATGGTAGTTGTCCAAGCCAGGTTTTGACATCTATTAGCTTTCTGCCCTTGGTGTGATTGATGAGCT-CAGTAATAGGGGACAATTAGGTAATCTATTTTGATGAGGTAATA---TATTTAT-ACATAAATTTAGTTACAAGTTATGAATTAGCAAAAATGCTCTG-AACTACAAGCCACAATGAATAG---AACAAATAATCAAAATTAGCACTTAATATCATTTTCCAAAAAC--TCAAATTCAAATATTAGAACCTATG-ATAAAACATCCATCAGTT----TTTGAGATTTCAAGATTATTTCAGCAATCCAATTCaagaataaattattacattgctttactatt--tctgaa-ta----tttaaacatgttatctcattacatcctcctcacagcttagtgaagaaaaatagtaaaatccttattttttagaagaagtcatggagccta i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2500357 523 + 12154212 GATTTTGTCTTGTATGTCAGTTGGAGAGGACCAAGAAGAT---CCAGCC----CTCTAAAACAGATCTGCTGGCTCAGAGTTTGACTAGACAGAGAATAAATGGTAGCTGTCCAAGCCAGGTTTTGACATCTATTAGCTTTCTGCCCTTGGTGTGATTGATGAGCT-CAGTAATAGAGGACAATTAGGTAATCTATTTTGATGAGGTAATA---TATTTAT-ACATAAATTTAGTTACAAGTTATGAATTAGCAAAAATGCTCTG-AACTACAAGCCACAATTTATAG---AACAAATAATCAAAATTAGCACTTAATATCATTTTCCAAAAAC--TGAAATTTAAATATTAGAACCTATG-AAAAAACAT-CATCAGGT----TTTGAGATTTCAAAATTATTTCAGCAATCCAATTCAAGAATAAATTATTACATTGCTTTACTCTT--TCTGAA-TA----TTTAAacatgttatctcattacatcctcctcacagcttagtgaagaaaaatagtaaaatccttattttttagaagaagtcatggagccta i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19628447 522 - 27850971 -GTTTTGTCTTCCACATCAGTTGGAGATAAATATGGAAATTAAGCAA-G----TTCTAACAAGGATCTCCTCAGTCAGAATTTGAGTAGCTAGAGGAG---TAGTAGTAGTCCAAGCCAG-TATTGACATGTATTAGTTTTCTGCCTTTGGTGTGATTGAGTAGCT-TATTAGTAGGGGACAATTATGTTATCTAGTTTAATGAAGTAATA---CGTTTAT-AAGTAAATTTTGTTGCAAATTATAAAATAGCTGAGATGCCCAG-AATTATAAGGTGCAAAGAATAAAATAACTAATAGTTAAAATTAGGACTTAATAACATT-TCTGAAAACTG---------AGTATTAGAACCTAT--AAAAAACACATGCTGGGTTTTGTTTGTGACTCCAAAATATTTTTAGCAGTAAAATTCAGGAACAGATTATTCCATTGCCTcactatttctctgagctt----tttaaaaatgttactttgttaaatcatcatagcagtctagtgaaataaggcagggaaatctttattttctttaagaaggcattgagccta i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1689793 521 - 2296528 GGTTACATCTTCCAAGTTAATTGGAGATGAATGTGG-GAT---TAAG-CATTGTTCTAATAAAGATCTGCTGTTTTAGAGTTTGGGTGGGTAGAGAATGAATAGTA---GTGCAAGCCAGATCTTGACCTTTATTGGTTTTCTGCCTTTGGTGTGATT----AGCTACAATAACAGGGTAAAATTATGTTATCTAATTTAATGAGGGAATA---TTTTTATAATATACATTTATTTACAAGTTATATAGTAGCTAAGATGCCCTGAAATTACAAACCAC-ATGAATGT---AAC-AGTAACCAAAATTAGAACTTAATAATATTATCTGAAAACTGCAACATTTGAATAATTAAACCTATG-AAAAAATG--CATTGGGT----TTTTAGATTCCAAAATGGTTTCAGCAATAAAGGTCAAG-ACACGTTATTGCATTGcttcactgtt-cgatgag-caatgttttataca--tcatctcattaaattctcataacagcctggtgaagtagggcagtaaaatc-ttattttatagaagatgacattgagctcc i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79076023 0 - 85426708 C e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=1450798.000000 s hg38.chr3_KI270784v1_alt 161433 160 + 184404 agagaagcaactggtctgaaaacaaaatacctattggttacaaagtgaggactTATTCTGAGTGCAGG-ACACTTTCCAGGATGTTAAGCTAACTAGAATTAATTTACTGAGCTATGCTTCTCTCAGTTTATGA--------------------------GTACTTCA------------TGTT-------TTTCTTCTTTAATTA s panTro5.chr3 54427 160 - 202621043 agagaagcaactggtctgaaaacaaaatacctattggttacaaagtgaggactTATTCTGAGTGCAGG-ACACTTTCCAGGATGTTAAGCTAACTAGAATTAATTTACTGGGCTATGCTTCTCTCAGTTTATGA--------------------------GTACTTCA------------TGTT-------TTTCTTCTTTAATTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 49378 160 - 205426864 agagaagcaactggtctgaaaacaaaatacctattggttacaaagtgaggactTATTCTGAGTGCAGG-ACACTTTCCAGGATGTTAAGCTAACTAGAATTAATTTACTGGGCTATGCTTCTCTCAGTTTATGA--------------------------GTACTTCA------------TGTT-------TTTCTTCTTTAATTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 67871 160 + 508821 agagaagCAACTGGACTGAAAACAAAATACCTATTGGTTACAAAGTGAGGACTTATTGTGAGTGCAGG-ACATTTTCCAGGATGTTAAGCTAACTAGAATTAATTTACTGAGCTATGCTTCTCTCAGTTTATGA--------------------------GTACTTCA------------TGTT-------TTTCTTCTTTAATTA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 33122 160 - 85730 agagaagcaactggtctaaaaacaaaatacctatgggttacagagtgaggacttactctgagtgcagg-acactttccaGGATGTTAAGCTAACTAGAATTAATTTACTGAGCTACGCTTCTCTCAGTTTATGA--------------------------GTACTTCA------------TGTT-------TTTCTTCTTTAATCA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 53431 160 - 181584905 agagaagcaacttgtctaaaaacaaaatacctatgggttacagagtgaggactTACTCTGAGTGCAGG-ACACTTTCCAGGATGTTAAGCTAACTAGAATTAATTTACTGAGCTACGCTTCTCTCAGTTTATGA--------------------------GTACTTCA------------TGTT-------TTTCTTCTTTAATCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 49742 160 + 4899514 agagaagcaactggtctaaaaacaaaatacctatgggttacagagtgaggacttactctgagtgcagg-acactttccaGGATGTTAAGCTAACTAGAATTAATTTACTGAGCTACGCTTCTCTCAGTTTATGA--------------------------GTACTTCA------------TGTT-------TTTCTTCTTTAATCA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 48322 160 + 97742 agagaagcaactggtctaaaaacaaaatacctatgggttacagagtgaggactTACTCTGAGTGCAGG-ACACTTCCCAGGATGTTAAGCTAACTAGAAATAATTTACTGAGCTACGCTTCTCTCAGTTTATGA--------------------------GTACTTCA------------TGTT-------TTTCTTCTTTAATCA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3699357 160 - 108555830 agagaagcaaccggtctgaaaacaaaatacctattggttacagagcgaggactTACTCTGAGTGCAGG-ACAGTTTCCAGGCCGTTAAGCTAACTAGAATTAACTTACTGAGCTATGTTTTCCTCAGTTTATGA--------------------------GTACTTCC------------TGTT-------TTTCTTCTTTAATTA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 48572 160 + 85016 agagaagcaactggtctaaaaacaaaatacctatgggttacagagtgaggacttactctgagtgcagg-acactttccaGGATGTTAAGCTAACTAGAAATAATTTACTGAGCTACGCTTCTCTCAGTTTATGA--------------------------GTACTTCA------------TGTT-------TTTCTTCTTTAATCA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1027156 160 - 1267912 agggaagcaactggtctaaaaacaaaatacctacgggttacagagtgaggacttactctgagtgcagg-acactttccaGGATGTTAAGCTAATTAGAATTAATTTACTGAGCTACGCTTCTCTCAGTTTATGA--------------------------GTACTTCA------------TGTT-------TTTCTTCTTTAATTA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 16426 157 + 8899380 a---aagcaactggtccaaaaacaaaatacctactggttatagagcgaagactTATTCTGAGTGCAGG-ACACTTTCCAGGATGTTAAACTGACTAGAATTAATTTACTGAACTATGCTTCTCTCAGTTTATGA--------------------------GTACTTTA------------TGTT-------TTTCTTCTTTAATTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4407548 160 + 4432243 agagaagcaactggtctgaaaacaaaacacctattggttatagagcgaggactTATTCTGAGTGCAGG-ACACTTTCCCAGATGTTAAGCTGACTAGAATTAATTTACTGAGCTATGCTTCTCTTTGTTTATGA--------------------------GTAGTTTA------------TGTT-------TTCATTCTTTTATTA i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2500880 160 + 12154212 agagaagcaactggtctgaacacaaaacacctattggttatagagtgaggactTATTCTGAGTGCAGG-ACACTTTCCAGGATGTTAAGCTGACTAGAATTAATTTACTGAGCTATGCTTCTCTTTGTTTATGA--------------------------GTAGTTTA------------TGTT-------TTTATTCTTTTATTA i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19628969 185 - 27850971 cgagaggcaacttgtttaagaac-aaatttctgttggttacagagctggaactTATTCTGAGTTCAGG-ACACTTTACATTATATCAAGCTAACTTTAGTGAATTTACTGAGCTATACTGTCCCTAACTCATGACCCCTGCAGGCCTCTTTACCTTTTTTGCatttta------------ttta-------tttatttgtttatta i otoGar3.GL873538 C 0 I 338 s canFam3.chr2 79076023 156 - 85426708 agagaagtgcctggtccaagaac-aaatagctgttggttatagagctaggact---TCAGGGTTTGAG-ACACTTTCCATTATGGCAAGCT-------CTTAGTTTACTGAGCTATAATGCCCTCAATTCATGA--------------------------CTAGTTGA------------TCTTACTTTTGATTCTCCTTTAATTA i canFam3.chr2 C 0 I 6 s dasNov3.JH570393 1690314 171 - 2296528 agagcag-gacttgtccaagaat-taacagctgtgtgttacagagctgggactGCTGCCAAGTACAGGAAAACTGTCTACTATGTCACACTTACTTCAGTTAATTTACTGAGCAGGACTACCCTCAACTCAGGG--------------------------CTACTTCACTTTATTTTTATTTTT-------CTTCTTCTTCAAGTA i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=397104.000000 s hg38.chr3_KI270784v1_alt 161593 44 + 184404 GAAGCTTAGT--AAGTTTATAGAGCTTAAAATTTTAAAGTGTATAG s panTro5.chr3 54587 44 - 202621043 GAAGCTTAGT--AAGTTTATAGAGCTTAAAATTTTAAAGTGTATAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 49538 44 - 205426864 GAAGCTTAGT--AAGTTTATAGAGCTTAAAATTTTAAAGTGTATAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 68031 44 + 508821 GAAGCTTAGT--AAGTTTATAGAGCTTAAAATTTTAAAGTGTATAG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 33282 44 - 85730 GAAGCTTAGT--AAGTTTATAGAGCTTAAAATTTTAAAGTGTATAG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 53591 44 - 181584905 GAAGCTTAGT--AAGTTTATAGAGCTTAAAATTTTAAAGTGTATAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 49902 44 + 4899514 GAAGCTTAGT--AAGTTTATAGAGCTTAAAATTTTAAAGTGTATAG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 48482 44 + 97742 GAAGCTTAGT--AAGTTTATAGAGCTTAAAATTTTAAAGTGTATAG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3699517 44 - 108555830 GAAGCTTAAT--AAGTTTATACAGCTTAAAATTTTAAAGTATATTG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 48732 44 + 85016 GAAGCTTAGT--AAGTTTATAGAGCTTAAAATTTTAAAGTGTATAG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1027316 44 - 1267912 GAAGCTTAGT--AAGTTTATAGTGCTTAAAGTTTTAAAGTGTATAG i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 16583 44 + 8899380 GAAGCTTAAT--AAGTTTATAGAGCTTAAAATTTTAAGGTGTATGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4407708 44 + 4432243 GAAGCCTAAT--AAATGTATAGAGCTTAAAATTTTAAAGTGTATGG i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2501040 44 + 12154212 GAAGCTTAAT--AAATTTATAGAGCTTAAAATTTTAAAGTGTATGG i aotNan1.NW_018507789v1 C 0 C 0 s canFam3.chr2 79076185 46 - 85426708 CATACTTAATAAAAGTTTTTAGAACTTATAAATTTTAAGTATCTAT i canFam3.chr2 I 6 I 3 s dasNov3.JH570393 1690485 44 - 2296528 AATGCTTAAT--AAGTTTGTAGAGCTTATAAGTTTGAAGGCTATGG i dasNov3.JH570393 C 0 C 0 e otoGar3.GL873538 19629154 338 - 27850971 I e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=1991895.000000 s hg38.chr3_KI270784v1_alt 161637 234 + 184404 -GACATTAG----------------------AGTTCTGAT--ATTAGCTCTGAT-ATTGTCTGAAATGCTTTAAGAATT---TAACATAGTTGGTAAATATTTTTCATGTCACTATTAAAATAGTAATTTTATTTATTAC-ATTTATTATG--CATAGCATTCAACAACAAATTTTGGAACCTA---AAAATAAG-T---ACTTTAAAATCATCTTCAAAATGACAATTAAGGTAGGACTTC---------------------------TTTTAGTAAATTTCTC-----------ATTTCTCTT-------------------------GGTGGT s panTro5.chr3 54631 234 - 202621043 -GACATTAG----------------------GGTTCTGAT--ATTAGCTCTGAT-ATTGTCTGAAATGCTTTAAGAATT---TAACATAGTTGGTAAATATTTTTCATGTCAGTATTAAAATAGTAATTTTATTTATTAC-ATTTATTATG--CATAGCATTCAACAACAAATTTTGGAACATA---AAAATAAG-T---ACTTTAAAATCATCTTCAAAATGACAATTAAGGTAGGACTTC---------------------------TTTTAGTCAATTTCTC-----------ATTTCTCTT-------------------------GGTGGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 49582 234 - 205426864 -GACATTAG----------------------AGTTCTGAT--ATTAGCTCTGAT-ATTGTCTGAAATGCTTTAAGAATT---TAACATAGTTGGTAAATATTTTTCATGTCAGTATTAAAATAGTAATTTTATTTATTAC-ATTTATTATG--CATAGCATTCAACAACAAATTTTGGAACATA---AAAATAAG-T---ACTTTAAAATCATCTTCAAAATGACAATTAAGGTAGGACTTC---------------------------TTTTAGTCAATTTCTC-----------ATTTCTCTT-------------------------GGTGGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 68075 231 + 508821 -GACATTAG----------------------AGTTCTGAT--ATTAGCTCTGAT-ATTGTCTGAAATGCTTTAAGAATT---TAACATAGTTGGTAAATATTTTTCATGTCACTATTAAAATAGTAATTTTAT---TTAC-ATTTATTATG--CATAGCATTCAACAACAAATTTTGGAACATA---AAAATAAG-T---ACTTTAAAATCATCTTCAAAATGACAATTAAGGTAGGACTTC---------------------------CTTTAGTAAATTTCTC-----------ATTTCTCTC-------------------------GGTGGT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 33326 235 - 85730 -GACATTAG----------------------AGTTCTGAT--ATTAGCTCTGAT-ATTGTCTGAAATGCTTTAAGAATT---TAATATATTTGGTAAATATTTTTCATATCACTATTAAAATAGTAATTTTATTTATTAC-ATTTATTATG--CATAGCATCCAACAACAAATTTTGGAACATA---AAAATAAGAT---ACTTTAAAATGATCTTCAAAATGACAGTCAAGGTAAGATTTC---------------------------TTATAGTAAATTTCTC-----------ATTTCTCTT-------------------------GGTGGT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 53635 235 - 181584905 -GACATTAG----------------------AGTTCTGAT--ATTAGCTCTGAT-ATTGTCTGAAATGCTTTAAGAATT---TAATATATTTGGTAAATATTTTTCATATCACTATTAAAATAGTAATTTTATTTATTAC-ATTTATTATG--CATAGCATCCAACAACAAATTTTGGAACATA---AAAATAAGAT---ACTTTAAAATGATCTTCAAAACGACAGTCAAGGTAAGATTTC---------------------------TTATAGTAAATTTCTC-----------ATTTCTCTT-------------------------GGTGGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 49946 235 + 4899514 -GACATTAG----------------------AGTTCTGAT--ATTAGCTCTGAT-ATTGTCTGAAATGCTTTAAGAATT---TAATATATTTGGTAAATATTTTTCATATCACTATTAAAATAGTAATTTTATTTATTAC-ATTTATTATG--CATAGCATCCAACAACAAATTTTGGAACATA---AAAATAAGAT---ACTTTAAAATGATCTTCAAAACGACAGTCAAGGTAAGATTTC---------------------------TTATAGTAAATTTCTC-----------ATTTCTCTT-------------------------GGTGGT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 48526 235 + 97742 -GACATTAG----------------------AGTTCTGAT--ATTAGCTCTGAT-ATTGTCTGAAATGCTTTAAGAATT---TAATATATTTGGTAAATATTTTTCATATCACTATTAAAATAGTAATTTTATTTATTAC-ATTTATTATG--CATAGCATCCAACAACAAATTTTGGAACATA---AAAATAAGAT---ACTTTAAAATGATCTTCAAAACGACAGTCAAGGTAAGATTTC---------------------------TTATAGTAAATTTCTC-----------ATTTCTCTT-------------------------GGTGGT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3699561 235 - 108555830 -GACATTAG----------------------AGTTCTGAT--ATTAGCTCTGAT-ATTGTCTGAAATGCTTTAAGAATT---TAATATGTTTGGTAAATATTTTTCATATCACTATTAAAATACTAATTTTATTTATTAC-ATTTATTATG--CATAGCATTCAACAACAAATTTTGGAACATA---AAAATAAGAT---ACTTAAAAATCATCTTCGAAATGACAATCAAGGTAAGACTTC---------------------------TGATAGTAAATTTCTC-----------ATTTCTCTT-------------------------GGTGGT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 48776 235 + 85016 -GACATTAG----------------------AGTTCTGAT--ATTAGCTCTGAT-ATTGTCTGAAATGCTTTAAGAATT---TAATATATTTGGTAAATATTTTTCATATCACTATTAAAATAGTAATTTTATTTATTAC-ATTTATTATG--CATAGCATCCAACAACAAATTTTGGAACATA---AAAATAAGAT---ACTTTAAAATGATCTTCAAAACGACAGTCAAGGTAAGATTTC---------------------------TTATAGTAAATTTCTC-----------ATTTCTCTT-------------------------GGTGGT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1027360 235 - 1267912 -GACATTAG----------------------GGTTTTGAT--ATTAGCTCTGAT-ATTGTCTGAAATGCTTTAAGAATT---TAATATATTTGGTAAATATTTTTCATATCACGATTAAAATAGTAATTTTATTTATTAC-ATTTATTATG--CATAGCATCCAACAACAAATTTTGGAACATA---AAAATAAGAT---ACTTTAAAATGATCTTCAAAACGAAAGTCAAGGTAAGATTTC---------------------------TTATAGTAAATTTCTC-----------ATTTCTCTT-------------------------GGTGGT i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 16627 235 + 8899380 -TACATTAG----------------------AGTTCTGAT--ATTAGCTCTGAT-ATTGTCTGAAAAGCTTTAAAATTT---C-ATATGTTTGCtaaatattttt-atattatgattaaaatagtaattttatgtattat-gtttattatGCTTGTAGCATTCAACAACAAATTTCAGAACATA---AAAATAAGAT---ACTTAAAAATCGTCTGCGAAATAACAATCGAGGTAAGACTTC---------------------------TGTTAGTAAATTTCTC-----------ATTTCTTCT-------------------------GGTAGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4407752 222 + 4432243 -GACATTAG----------------------AGTTCTTAC--ATTGGCTCTGAT-ATTGTCTGAAATGCTTTAAGAATT------TATGTTGGGTAAAATTTTTT-ATATTACTATTAAAATAGTAATTTCATTTAT-----TTTATTATG--TATAGCATTCAACAACAAATTTTGGAACAT--------TAAGAT---ACTTAAAAATCATCTTTGAAATGACAATCAAGGTAAGACTTC---------------------------TCATAGTAAATTCCTC-----------ATTTTTCTT-------------------------GGTGGT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2501084 222 + 12154212 -GACATTAG----------------------AGTTCTGAT--ATTAGCTCTGTT-ATTGTCTGAAATGCTTTAAGAATT------TATGTTTGGTAAATTTTTTT-ATATTGCTATTAAAATAGTAATTTCA----------CTTTTTATG--TATAGCTTTCAACAACAAATTTTGGAACATA---AAAATAAGAT---ACTTAAAAATCATCTTCGAAATGACAATCAAGGTAAAACTTC---------------------------TCATAGTAAATTCCTC-----------ATTTTTCTT-------------------------GGTGGT i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19629492 323 - 27850971 -AATGTTAGAGataattttttatattatataagtttttat--attaGCTCTGATAATTGTCTGAAATACTTTACGAATT---TAATAGATTTGGTAAGTGTTTTTCATATTAGTAGTAAAGTGTTAATTTTATTTATTTT-ATCTTTTTT---CATAGCAGTCGCCAACTAATTTCTGAATATAAAGAAGAAAAGAT---ACCCGAAAATCCTTCTCAAAATAGCAATTCAGGTAAGACTTTGATGTGAATTACTCTTGGTATTCTCTATCTTGGTGAATTACTCTTAGATAGCGAATTACTCTTGCCATAAATAAAAAAGGAAGAGTAAGGAAGT i otoGar3.GL873538 I 338 C 0 s canFam3.chr2 79076234 231 - 85426708 -GTAATTTA----------------------AGTTTTGAT--GTTAACTCTGAT-ATTGTTTGAAATAC-TCAAGAATT---TGGTACATTTGGTAAATGTCTTTCATATCAGTATTAAAAGAGTAACATTGTTTATCACTCTTTGTTATA--TGTAGCAGTCACCAACTAATTTCTGAACATA---AAGAAGAAATGAAACCTGAAAATTCTTCACAAAGTCACAATCTAGGTATGACTTT---------------------------TTAGAGTGAATTACAT-----------AT--------------------------------GGTGGT i canFam3.chr2 I 3 C 0 s dasNov3.JH570393 1690529 235 - 2296528 GATAATTAA----------------------AGTTCTGAGCACTTATCTCTGAC-ATGTTCTGAAATCTTTTGAGAATTATTTAATATATATGGTAAATGTTCTTCATTTCAGCATTAAAATAGTAATACTATCAAT----TTTTTAAATA--CACAGCAGTCGCCAACTAATTTCTTCATATAAAGAAGAAAAGCT---ACCTAAAAATTCCTCTCAAAATAATAATCCAGGTAAGACTTC---------------------------TGATAATGAA-----------------ATTACTCTT-------------------------GGTGGT i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=35925.000000 s hg38.chr3_KI270784v1_alt 161871 4 + 184404 CTTA s panTro5.chr3 54865 4 - 202621043 CTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 49816 4 - 205426864 CTTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 68306 4 + 508821 CTTA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 33561 4 - 85730 CTTA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 53870 4 - 181584905 CTTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 50181 4 + 4899514 CTTA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 48761 4 + 97742 CTTA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3699796 4 - 108555830 CTTA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 49011 4 + 85016 CTTA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1027595 4 - 1267912 CTTA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 16862 4 + 8899380 CTTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4407974 4 + 4432243 CTTA i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2501306 4 + 12154212 CTTA i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19629815 4 - 27850971 TTCT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79076465 4 - 85426708 CCTA i canFam3.chr2 C 0 I 382 e dasNov3.JH570393 1690764 0 - 2296528 C e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=599812.000000 s hg38.chr3_KI270784v1_alt 161875 81 + 184404 TTGATTTTAAAAAGTAAGATTACA-------------ggccaggcatgatgggtcatgcctgtaatcccagcactttgggaggccaaggcaggt s panTro5.chr3 54869 81 - 202621043 TTGATTTTAAAAAGTAAGATTACA-------------ggccaggcatgatgggtcatgcctgtaatcccagcactttgggaggccaaggcaggt i panTro5.chr3 C 0 C 0 s panPan2.chr3 49820 81 - 205426864 TTGATTTTAAAAAGTAAGATTACA-------------ggccaggcatgatgggtcatgcctgtaatcccagcactttgggaggccaaggcaggt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 68310 81 + 508821 TTGATTTTAAAAAGTAAGATTACA-------------ggctaggcatgatgggtcatgcctgtaatcccagcactttgggaggccaaggcaggt i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 33565 81 - 85730 TTGATTTTAAAAAGTAAGATTATA-------------ggccaggcacaatgggtcacgcctgtaatcctagcactttgggaggccaaggcaggt i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 53874 81 - 181584905 TTGATTTTAAAAAGTAAGATTATA-------------ggccaggcacaatgggtcacgcctgtaatcctagcactttgggaggccaaggcaggt i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 50185 81 + 4899514 TTGATTTTAAAAAGTAAGATTATA-------------ggccaggcacaatgggtcacgcctgtaatcctagcactttgggaggccaaggcaggt i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 48765 81 + 97742 CTGATTTTAAAAAGTAAGATTATA-------------ggccaggcacaatgggtcacgcctgtaatcctagctctttgggaggccaaggcaggt i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3699800 81 - 108555830 CTGATTTTTAAAAGCAAAACTACA-------------ggccaggtttggtggctcaaacatgtaatcccagctctttgggaggccaaggcgggt i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 49015 81 + 85016 TTGATTTTAAAAAGTAAGATTATA-------------ggccaggcacaatgggtcacgcctgtaatcctagcactttgggaggccaaggcaggt i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1027599 81 - 1267912 TTGATTTTAAAAAGTAAGATTATA-------------ggccaggcacaatgggtcacgcctgtaatcctagcactttgggaggctgaggcaggt i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 16866 81 + 8899380 TTGATTTTAAAAGGCAGTATTACA-------------ggccaggcacggtggctcacagctatgaccccagcactttggtataccaaggcgggt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4407978 81 + 4432243 TTGATTTTAAAAACTAAGATTACA-------------ggcttggcatagtggctcaaggctgtgattccagcactttgggaggcaaagttgggt i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2501310 81 + 12154212 TTGATTTTAAAAAGTAAGATTACA-------------ggctaggcatggtggctcatggctgtgattccagcactttgggaggtgaagttgggt i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19629819 94 - 27850971 TCTAATCACAAAAGAGCAGTTAAAAAAATCATTGTGTggctgggcacagtggcttatgcttgtaatcctagcattctgggaggccgaggctgat i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79076469 382 - 85426708 I e dasNov3.JH570393 1690764 0 - 2296528 C e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 155835 49227 - 123690457 I a score=510329.000000 s hg38.chr3_KI270784v1_alt 161956 56 + 184404 ggatcacctgaggtcaggag-tttgagaccagcctggctaacatggcaaaa-cccatc s panTro5.chr3 54950 56 - 202621043 ggatcacctgaggtcaggag-tttgagaccagcctggctaacatggcaaaa-cccatc i panTro5.chr3 C 0 C 0 s panPan2.chr3 49901 56 - 205426864 ggatcacctgaggtcaggag-tttgagaccagcctggctaacatggcaaaa-cccatc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 68391 56 + 508821 ggatcacctgaggtcaggag-tttgagaccagcctggctaacatggcaaaa-cccatc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 205062 56 - 123690457 ggatcaccggaggtcaggag-tttgagaccagcctggctaacatggcaaaa-cccgtc i nomLeu3.chr11 I 49227 C 0 s rheMac8.chrUn_NW_014858614v1 33646 56 - 85730 ggatcacctgaggtcaggag-tttgagaccagcctggctaacatggcaaaa-cccatc i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 53955 56 - 181584905 ggatcacctgaggtcaggag-tttgagaccagcctggctaacatggcaaaa-cccatc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 50266 56 + 4899514 ggatcacctgaggtcaggag-tttgagaccagcctggctaacatggcaaaa-cccatc i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 48846 56 + 97742 ggatcacctgaggtcaggag-tttgagaccagcctggctaacatggcaaaa-cccgtc i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3699881 57 - 108555830 ggatcacctgaggtcaggat-tttgagaccagcctggctaacatggtgaaaccccatc i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 49096 56 + 85016 ggatcacctgaggtcaggag-tttgagaccagcctggctaacatggcaaaa-cccgtc i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1027680 57 - 1267912 ggatcacttgaggtcaggag-tttgagactagcctggctaacatggtgaaaccccgtc i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 16947 57 + 8899380 ggacctgctgaggtcaggag-tttgagaccaacctggctaacgtggcaaaactctatc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4408059 58 + 4432243 ggaccacctgaggtcaggagttttgagaccagcctggctaacatgacaaaaccccatc i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2501391 58 + 12154212 ggaccacctgaggtcaggagatttgagaccagcctggctaacatgacaaaaccccatc i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19629913 52 - 27850971 ----agcttgaactcatggg-tttgagaccagcctgagcaaaaagtgagac-tctgtc i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79076469 382 - 85426708 I e dasNov3.JH570393 1690764 0 - 2296528 C e calJac3.chr18 46470284 8193 - 47448759 M a score=257132.000000 s hg38.chr3_KI270784v1_alt 162012 36 + 184404 tctactaaaaatacaaaaa----------------------------------------------------------------tta---------------------------------------------------------gctgggcatggtgg s panTro5.chr3 55006 36 - 202621043 tctactaaaaatacaaaaa----------------------------------------------------------------tta---------------------------------------------------------gctgggcgtggtgg i panTro5.chr3 C 0 C 0 s panPan2.chr3 49957 36 - 205426864 tctactaaaaatacaaaaa----------------------------------------------------------------tta---------------------------------------------------------gctgggcgtggtgg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 68447 36 + 508821 tctactaaaaatacaaaaa----------------------------------------------------------------tta---------------------------------------------------------gctgggcgtggtgg i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 205118 36 - 123690457 tctactaaaaatacaaaaa----------------------------------------------------------------tta---------------------------------------------------------gccaggggtggtgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 33702 36 - 85730 tctactaaaaatacaaaaa----------------------------------------------------------------tta---------------------------------------------------------gccaggcgtggtgg i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 54011 36 - 181584905 tctactaaaaatacaaaaa----------------------------------------------------------------gta---------------------------------------------------------gccaggcgtggtgg i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 50322 36 + 4899514 tctactaaaaatacaaaaa----------------------------------------------------------------tta---------------------------------------------------------gccaggcgtggtgg i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 48902 36 + 97742 tctactaaaaatacaaaaa----------------------------------------------------------------tta---------------------------------------------------------gccaggcgtggtgg i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3699938 36 - 108555830 tctactaaaaatatgaaaa----------------------------------------------------------------tta---------------------------------------------------------gctgggcatggtgg i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 49152 36 + 85016 tctactaaaaatacaaaaa----------------------------------------------------------------tta---------------------------------------------------------gccaggcgtggtgg i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1027737 36 - 1267912 tctactaaaaatacaaaaa----------------------------------------------------------------tta---------------------------------------------------------gccaggcgtggtgg i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 17004 35 + 8899380 tcttctaaaaata-aaaaa----------------------------------------------------------------tca---------------------------------------------------------gtcaggcaggatgg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4408117 36 + 4432243 tctactaaaaatacaaaaa----------------------------------------------------------------tta---------------------------------------------------------accaggtgtggtgg i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2501449 36 + 12154212 tctactaaaaatacaaaaa----------------------------------------------------------------tta---------------------------------------------------------gccaggtgtggtgg i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19629965 157 - 27850971 tctactaaaaatagaaaaaaacgagaatcacttgagcccaagagttggaggttgctgtcagctatgacaccatgggactctacttagggcaacagcttgagactcttgtctcaaacaaaCAAACAAAAAAATCATTGTGTAGggctgggtgtgatgg i otoGar3.GL873538 C 0 I 138 s dasNov3.JH570393 1690764 13 - 2296528 TCTACTATATGTA------------------------------------------------------------------------------------------------------------------------------------------------ i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79076469 382 - 85426708 I e calJac3.chr18 46470284 8193 - 47448759 M a score=2361530.000000 s hg38.chr3_KI270784v1_alt 162048 304 + 184404 caggcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccaggaggtggaggttgcagtgagctgagatcacaccactgcactccagcctggat-aaaaaaa-caagactctatctccg-aaaaaa----------aaaaa-----aaGTAAGATTACATAGTTTTAATCATAAAAGAGCAGTTTAAAAT-ATATA----TGTATATA----CAT-----TTTTTAAATTTAATTTATT--TAG---TTTAGAATTCAG--AG----TTAAGAAGTTAGTTGTAGCTAATTCATAATCTC--ACAGTATTGTCTG-AAA-ACAATGCATTTACC s panTro5.chr3 55042 305 - 202621043 caggcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccaggaggtggaggttgcagtgagctgagatcacaccactgcactccagcctggat-aaaaaaa-caagactctatctccgaaaaaaa----------aaaaa-----aaGTAAGATTACATAGTTTTAATCATAAAAGAGCAGTTTAAAAT-ATATA----TGTATATA----aat-----tttttaaatttaatttatt--tag---tttagaattcag--ag----ttaagaagttagTTGTAGCTAATTCATAATCTC--ACAGTATTGTCTG-AAA-ACAATGCATTTACC i panTro5.chr3 C 0 C 0 s panPan2.chr3 49993 302 - 205426864 caggcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccaggaggtggaggttgcagtgagctgagatcacaccactgcactccagcctggat-aaaaaaa-caagactctatctccg---aaaa----------aaaaa-----aaGTAAGATTACTTAGTTTTAATCATAAAAGAGCAGTTTAAAAT-ATATA----TGTATATA----aat-----tttttaaatttaatttatt--tag---tttagaattcag--ag----ttaagaagttagTTGTAGCTAATTCATAATCTC--ACAGTATTGTCTG-AAA-ACAATGCATTTACC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 68483 305 + 508821 caggcacctgtaatcccagctactcaggaggctgaggaaggagaatcacttgaacccaggaggtggaggttgcagtgagctgagatcgcaccactgtactccagcctggataaaaaaaa-caagactctatctcca-aaaaaa----------aaaaa-----aaGTAAGATTACATAGTTTTAATCATAAAAGAGCAGTTTAAAAT-ATATA----TGTATATA----AAT-----TTTTTAAATTTAATTTATT--TAG---TTTAGAATTCAG--AG----TTAAGAAGTTAGTTGTAGCTAATTCATAATCTC--ACAGTATTGTCTG-AAA-ACAATGCATTTACC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 205154 308 - 123690457 cgggcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccaggaggtggaggttgcagtgagctgagattgcaccactgcactccagcccagat-taaagag-caagactctatctccc-aaaaaa----------aaaaa-----aaGTAAGATTACATAGTTTTAATCATAAAAGAGCAGTTTAAAAT-ATGTA----TGTatataaattaat-----tttttaaatttaatttatt--tag---tttagaattcag--ag----ttaagaagttagTTGTAGCTAATTCATAATCTC--ACAGTATTGTCTG-AAA-ACAATGCATTTACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 33738 306 - 85730 caggcacctgtaatcccagctactcaggaggctgaggcagcagaatcacttgaacctgggaggtggaggttgcagtgagctgagatcgcaccactgcactccaacctggat-aaaagagccaagactccatctcc---aaaaa----------aaaaa-----aaGTAAGGTTATATAGTTTTAATCATAAAAGAGCAGTTTTAAAT-ATATA----TGTATATA----AAT-TAA-TTTTTAAATTTAATTTATT--TAG---TTTAGAATTCAG--AA----TTAACAAGTTAGTTGTAGCTAATTCATAATCTC--GCAGTATTGTCTG-AAA-ACCATGCATTTACC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 54047 306 - 181584905 caggcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagctgagatcgcaccactgcactccaacctggat-aaaagagccaagactccatctcc---aaaaa----------aaaaa-----aaGTAAGGTTATATAGTTTTAATCATAAAAGAGCAGTTTTAAAT-ATATA----TGTATATA----AAT-TAA-TTTTTAAATTTAATTTATT--TAG---TTTAGAATTCAG--AA----TTAACAAGTTAGTTGTAGCTAATTCATAATCTC--GCAGTATTGTCTG-AAA-ACCATGCATTTACC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 50358 306 + 4899514 caggcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagctgagatcgcaccactgcactccaacctggat-aaaagagccaagactccatctcc---aaaaa----------aaaaa-----aaGTAAGGTTATATAGTTTTAATCATAAAAGAGCAGTTTTAAAT-ATATA----TGTATATA----AAT-TAA-TTTTTAAATTTAATTTATT--TAG---TTTAGAATTCAG--AA----TTAACAAGTTAGTTGTAGCTAATTCATAATCTC--GCAGTATTGTCTG-AAA-ACCATGCATTTACC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 48938 307 + 97742 caggcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagctgagatcgcaccactgcactccaacctggat-aaaagagccaagactccatctcc--aaaaaa----------aaaaa-----aaGTAAGATTATATAGTTTTAATCATAAAAGAGCAGTtttaaat-atata----tgtatata----aat-taa-tttttaaatttaatttctt--tag---tttagaattcag--aa----ttaaCAAGTTAGTTGTAGCTAATTCATAATCTC--GCAGTATTGTCTG-AAA-ACCATGCATTTACC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3699974 296 - 108555830 caggcgcctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaacccaggaagtggaggttgcagtgagctgagatggcaccactgcactctagcctggat-gaaagaa-cgagactctctctcc--aaaaaa------aaacaaaaa-----aaGTAAGATTACGTATTTTTAATCATAAAAGAGCAGTTTAAAAT-ATGTAtatttatgtata----aat-taattttttaaatttaatttc----------tttagaattcagttat----ttaAGAAGTTAG----------TTCTCAATCTCAAACAGTATTCTCTG-AAA-AAAAT--------T i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 49188 307 + 85016 caggcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagctgagatcgcaccactgcactccaacctggat-aaaagagccaagactccatctcc--aaaaaa----------aaaaa-----aaGTAAGATTATATAGTTTTAATCATAAAAGAGCAGTtttaaat-atata----tgtatata----aat-taa-tttttaaatttaatttctt--tag---tttagaattcag--aa----ttaaCAAGTTAGTTGTAGCTAATTCATAATCTC--GCAGTATTGTCTG-AAA-ACCATGCATTTACC i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1027773 311 - 1267912 caggcacctataatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagctgagatcgcaccactgcactccaacctggat-aaaagagccaagactccatctcc---aaaaacaaaacaaaacaaaa-----aaGTAAGATTATTTAGTTTTAATCATAAAAGAGCAGTTTAAAAT-ATATA----TGTATATA----AAT-TAA-TTTTTA-----AATTTCTT--CAG---TTTAGAATTCAG--AG----TTAACAAGTTAGTTTTAGCTAATTCATAATCTC--ACAGTATTGTCTG-AAA-ACCATGTATGTACC i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 17039 302 + 8899380 ctggcacctgtaatcccagctacttgggaggctaaggcaggagaatcacttgaacctaggaagtggatgttgcagtaagctgagatcacaccactgcactccaccctggat-caaagag-caagactctatctcc----aaaa----------aaaaaaaaagaaGTAAGATTACATAGTTTTAATTATTAAAGGGTAGtttaaaaa------------tatata----tgt-att-tttttaaatttaattCC----------TTTAGAATTTAG--AGTTATTTAAGAGGTTAATTGTAGCTAATTTATAATCTCAAACAGTATTGTCTG--AA-AAAATTCATTTAGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4408153 311 + 4432243 tgggtgactgtaattccagctacttgggaggctaaggcaggataatcacttgaacgcaggagttagaggttgcagtgagctgagatcgcaccactgcactccaacctggat-aaaagcg-caagcttctatcttc----aaaa----------aaaaa-----aaGTAAGGTTACATAATTTTAATTATCAAAGAGCAGTTTAAAAAAACCTG----TGTGTATA----TAT-ATA-TTTTTTAATTTAATTTCTG--TAG---TTTAGAATTTAG--AGTTATTTAAGAAGTTAATTGTAGCTAATTTATAATCTCAAACAGTATTGTCTG-AAA-AAAATTTATTTACC i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2501485 304 + 12154212 tgggtgcctgtaattccagctacttgggaggctaaggcaggataataacttgaacccaggagttagaggttgcaatgagctgagatcgcaccactatactccaacctggat-gaaaaag-caagattctatcttc----aaaa----------aaaaa-----aaGGAAGGTTACATAATTTTAATTATCAAAGAGCAGTTTAAAAA-AATTA----TGTATATA----TAT-AAA-TT------TTTAATTTCTG--TAG---TTTAGAATTTAG--AGTTATTTAAGAAGTTAATTGTAGCGAATTTATAATCTCAAACAGTACTGTATG-AAA-AAAATTTATTTACC i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19630260 270 - 27850971 cacatacctataataccaactacataggaagccgaggtaggaggatcagttgagcccaggagtttgatgttgcagtgagctgtgatgatgccactgctctgtagctggggt-gatagag-ggagactctttctca---aaaaa----------ataaa-----aa--------------------------------------aaaT-CACTA----TGTAAATG----GATATTG-TTTCTTAATTT--CTTCCT--TAGTGCTCTAGAATTTAG--AATCATTTAAGAAATTAGTTGTAGGCAATTTATAGTCTC-AACAATATTATCTGGGGA-AAAATACTT----- i otoGar3.GL873538 I 138 C 0 s dasNov3.JH570393 1690777 178 - 2296528 --------------------------------------AAGAAAATCA----AAGCAAGAAGGTTTTGAT--------------------------------------AAT-GAAAGAC-CA---------------GTTAAA----------AAAAA-----AATCAACA-----------------------------TGTAAAT----------TGCATGTA----TGT-----TTTTTC-------TTCCTTAGTAG---TCTAGAATTCAG--AATTATTTAAGAAGTTAATTGTAGGCAATTGATATTCTGAAACAGTATTGTCTG-AAAGGAAATTCATTTATT i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79076469 382 - 85426708 I e calJac3.chr18 46470284 8193 - 47448759 M a score=1342497.000000 s hg38.chr3_KI270784v1_alt 162352 134 + 184404 TACTTATGTTCCCTGAAATTCGACGTGATATTTTTGTATTAATATAAA--TAAGAAATTAGATTTTTAAGTTAGTATGTTGTAT-TTTCCTCTATAATCACATTATTACAAATTGGACTTTTGATGCAAATGGatct s panTro5.chr3 55347 134 - 202621043 TACTTATGTTCCCTGAAATTCGACATGATATTTTTGTATTAATATAAA--TAAGAAATTAGATTTTTAAGTTAGTATGTTGTAT-TTTCCTCTATAATCACATCATTACAAATTGGACTTTTGATGCAAATGGATCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 50295 134 - 205426864 TACTTATGTTCCCTGAAATTCGACATGATATTTTTGTATTAATATAAA--TAAGAAATTAGATTTTTAAGTTAGTATGTTGTAT-TTTCCTCTATAATCACATCATTACAAATTGGACTTTTGATGCAAATGGATCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 68788 134 + 508821 TACTTATGTTCCCTGAAATTCGACGTGATATTTTTGTATTAATATAAA--TAAGAAATTAGATTTTTAAGTTAGTATGTTGTAT-TTTCCTCTATAATCACGTTATTACAAATTGGACTTGTGATGCAAATGGatct i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 205462 134 - 123690457 TACTTATGTTCCCTGAAATTCGACATGATAGTTTTGTATTAATATAAA--TAAGAAATTAGATTTTTAAGTTAGTATGTTGTAT-TTTCCTCTATAATCACATTATTACAAATTGGACTTGTGATGCAAATGGatct i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 34044 134 - 85730 TACTTATGTTCCCTGAAATTCTACATGATATTTTTGTGTAAATATAAA--TAAGAAATTAGATTTTTAAGTTAGTATGTTTTAT-TTTCCTCTATAATCACATTATTACAAATTGGACTTGTGATGCAAATGGATCT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 54353 134 - 181584905 TACTTATGTTCCCTGAAATTCTACATGATATTTTTGTGTAAATATAAA--TAAGAAATTAGATTTTTAAGTTAGTATGTTTTAT-TTTCCTCTATAATCACATTATTACAAATTGGACTTGTGATGCAAATGGatct i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 50664 134 + 4899514 TACTTATGTTCCCTGAAATTCTACATGATATTTTTGTGTAAATATAAA--TAAGAAATTAGATTTTTAAGTTAATATGTTTTAT-TTTCCTCTATAATCACATTATTACAAATTGGACTTGTGATGCAAATGGATCT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 49245 134 + 97742 TACTTATGTTCCCTGAAATTCTACATGATATTTTTGTGTAAATATAAA--TAAGAAATTAGATTTTTAAGTTAGTATGTTTTAT-TTTCCTCTATAATCACATTATTACAAATTGGACTTGTGATGCAAATGGATCT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3700270 134 - 108555830 TGTTTATGATCCCTGAAATTCTACATTATATTTTCGTATTAATATAAA--TAAGAAATTAGATTTTTAAGTTAACATATTGCAT-TTTCCTCTATAATTACATTGTTACAAATTGGACTTGTTATGCAAATGGATCT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 49495 134 + 85016 TACTTATGTTCCCTGAAATTCTACATGATATTTTTGTGTAAATATAAA--TAAGAAATTAGATTTTTAAGTTAGTATGTTTTAT-TTTCCTCTATAATCACATTATTACAAATTGGACTTGTGATGCAAATGGATCT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1028084 131 - 1267912 TACTTATGTTCCCTGAAATTCTAC---ATATTTTTGTGTAAATATAAA--TAAGAAATTAGATTTTTAAGTTAGTATGTTTTAT-TTTCCTCTATAATCACATTATTACAAATTGGACTTGTGATGCAAATGGATCT i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 17341 133 + 8899380 TACTTATGATCCCTGAAAATCTACATGATATTTTTGTAGTAATATAAA---AAAAAATTAGATTTTTAAGTTAGTATGTTGTAT-TTTTCTCTATAATCACATTATTACAAATTGGAGTTGTCAGGCAAATGGatct i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4408464 135 + 4432243 TACTTATGATCCCTGAAATTCTACATGATGTTTTTGTATTAATATAAA-TTTAAAAATTAGATTTTTAAGTTAGTATGTTGTAT-TTTTCTCTATAATCACATTATTACAAATTGGACTTGTTATGCAAATGTATTT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2501789 136 + 12154212 TACTTATGATCCCTGAAATTCTACCTGATGTTTTTGTATTAATATAAATTTAAAAAATTAGATTTTTAAGTTAGTATGTTGTAT-TTTTCTCTATAATCACATTATTACAAATTGGACTTGTTATGCAAATGGATTT i aotNan1.NW_018507789v1 C 0 C 0 s otoGar3.GL873538 19630530 122 - 27850971 TAATTTTGGTCTCTAAAATCCTGTAAGACATTTTTGCATACATAGGAA--AAAGAA----------TCAATTAGTATGTTGA---TTTCTTTAATAGTCACGTGATAACTAATTGGGCATGTTATAAAAATTGATCT i otoGar3.GL873538 C 0 I 20804 s canFam3.chr2 79076851 129 - 85426708 TAGTTTTGATACCTAAAATCCCACATAGTATCTTTGTGTAAATAAGGA--AAAAAA----GATTTTTAAGTTAGTATGTTTTATGTTTCCTCTATAA--ACATTATAAAAAATTATACTTCTTATAAAAATGGATCT i canFam3.chr2 I 382 C 0 s dasNov3.JH570393 1690955 118 - 2296528 TAAGCGTGACCCCTGAGATT--------TCCATATGTATCTGtataaa--taaaaaat---aatttta--ttaGAATGTTGTATGTATCCTCTGTAATCACATCACAACACATTGGCCtttttataaaaacat---- i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46470284 8193 - 47448759 M a score=99331.000000 s hg38.chr3_KI270784v1_alt 162486 9 + 184404 tctatttaa s panTro5.chr3 55481 9 - 202621043 TCTATTTAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 50429 9 - 205426864 TCTATTTAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 68922 9 + 508821 tctatttaa i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 205596 9 - 123690457 tctatttaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 34178 9 - 85730 TCTATTTAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 54487 9 - 181584905 tctatttaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 50798 9 + 4899514 TCTATTTAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 49379 9 + 97742 TCTATTTAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3700404 9 - 108555830 TCTATTTAA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 49629 9 + 85016 TCTATTTAA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1028215 9 - 1267912 TCTATTTAA i colAng1.NW_012116822v1 C 0 I 1911 s saiBol1.JH378197 17474 9 + 8899380 tctatttaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4408599 9 + 4432243 tctatttaa i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2501925 9 + 12154212 TCTATTTAA i aotNan1.NW_018507789v1 C 0 C 0 s canFam3.chr2 79076980 5 - 85426708 ----TTTAA i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1691073 9 - 2296528 tttatttta i dasNov3.JH570393 C 0 C 0 e otoGar3.GL873538 19630652 20804 - 27850971 I e calJac3.chr18 46470284 8193 - 47448759 M a score=297601.000000 s hg38.chr3_KI270784v1_alt 162495 33 + 184404 tttttataataaatggtttgtatttagtaaata s panTro5.chr3 55490 33 - 202621043 TTTTTATAATAAATGGTTTGTATTtagtaaata i panTro5.chr3 C 0 C 0 s panPan2.chr3 50438 33 - 205426864 TTTTTATAATAAATGGTTTGTATTtagtaaata i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 68931 33 + 508821 tttttataataaatggtttgtatttagtaaata i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 205605 33 - 123690457 tttttataataaatggtttgtatttagtaaata i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 34187 33 - 85730 TTTTTATAATAAATGGTTTGTATTtagtaaata i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 54496 33 - 181584905 tttttataataaatggtttgtatttagtaaata i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 50807 33 + 4899514 TTTTTATAATAAATGGTTTGTATTtagtaaata i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 49388 33 + 97742 TTTTTATAATAAATGGTTTGTATTtagtaaata i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3700413 33 - 108555830 TTTTTATGGTAAATGGTTTATATTtagtaaata i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 49638 33 + 85016 TTTTTATAATAAATGGTTTGTATTTAGTAAATA i manLeu1.NW_012101680v1 C 0 C 0 s saiBol1.JH378197 17483 33 + 8899380 tttttataataaatggtttgtatttagtaaata i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4408608 30 + 4432243 ttttt---ataagtggtttgtatttagtaaatt i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2501934 33 + 12154212 TTTTTATAATAAGTGGTTTGTATTtagtaaatt i aotNan1.NW_018507789v1 C 0 C 0 s canFam3.chr2 79076985 30 - 85426708 TTTTT---ACAAGTAGATTTCACTTCGCAAATA i canFam3.chr2 C 0 I 1063 s dasNov3.JH570393 1691082 33 - 2296528 tttttaCAACAAAtggattacatttagtaaatg i dasNov3.JH570393 C 0 C 0 e otoGar3.GL873538 19630652 20804 - 27850971 I e calJac3.chr18 46470284 8193 - 47448759 M e colAng1.NW_012116822v1 1028224 1911 - 1267912 I a score=102069.000000 s hg38.chr3_KI270784v1_alt 162528 12 + 184404 aatattaattat s panTro5.chr3 55523 12 - 202621043 aatattaattat i panTro5.chr3 C 0 C 0 s panPan2.chr3 50471 12 - 205426864 aatattaattat i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 68964 12 + 508821 aatattaattat i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 205638 12 - 123690457 aatattaattat i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 34220 12 - 85730 aatattaattat i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 54529 12 - 181584905 aatattaattat i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 50840 12 + 4899514 aatattaattat i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 49421 12 + 97742 aatattaattat i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3700446 12 - 108555830 aatcttaattac i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 49671 12 + 85016 AATATTAATTAT i manLeu1.NW_012101680v1 C 0 C 0 s saiBol1.JH378197 17516 12 + 8899380 aatattaattac i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4408638 12 + 4432243 aatattaattac i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2501967 12 + 12154212 aatattaattac i aotNan1.NW_018507789v1 C 0 C 0 s dasNov3.JH570393 1691115 12 - 2296528 aattttagttat i dasNov3.JH570393 C 0 I 327 e canFam3.chr2 79077015 1063 - 85426708 I e otoGar3.GL873538 19630652 20804 - 27850971 I e calJac3.chr18 46470284 8193 - 47448759 M e colAng1.NW_012116822v1 1028224 1911 - 1267912 I a score=7367458.000000 s hg38.chr3_KI270784v1_alt 162540 1072 + 184404 agttgattcttgaataatgtggcagttaggggctctgatccctgtgcagttgaaaatctgagtataactttgactccttctaaactt---a---actaatagcctaccattgactggaagccttgctgataacacaagcagtccatgaacgcatatttggtatgtgctgcattgttatatactatgtttgtacaataaagtaagctagagaaatgaagctgttataaag-aaagtcatagaaaag-aaaaaaacgtacttactattcataaggcagaagtgagtcttcccaaaggtcttcatcttcatcatcttcaggttgattaggctgaggaagaagaaaaaaggttggttttgctgtctctgggttgcagaggcagaagaaaaatctacatataagtgggcccctgcagttcaaactcttgttgttcaagagtcaactgtattacacaggaatttgtgtcactaagaaagtaactatctttagaactgggaactcaaaaatccctttctgataccataaacaaatggcaataaggaccataaaactgagccagtgtgcacccatacaaataggagattatttttgaagata-cctattgaatgcagaagatgggaaagtaattcctttacaagaagcagaagttatgttacatattcttctacaaacaaggtctatttttttcctcattctccataggttggaacctcatgagatatattcacttcttagaacaagc---tgtttttaaaaatgtgctggacaattatcataataatattaattttgttagaacaagagactctgttaccaggctgggtatggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggtatatcacttgaggtcaggagtttgagaccagcctaaccaacatggtgaaactccatctctactaaaaatacaaaaattagccaggcatgagggcaggcacctgtaatcccaact---acttgggaggctaagccaagagaattgcttgaacccaggaggtggagattgcagtgagctaagattgtgccactgcactccagcct-gggtgacagagca s panTro5.chr3 55535 1072 - 202621043 agttgattcttgaataatgtggcagttaggggctctgatccctgtgcagttgaaaatctgagtataactttgactccttccaaactt---a---actaatggcctaccattgaatggaagccttgctgataacacaagcagtccatgaacgcatatttggtatgtgctgcattgttatatactatgtttgtacaataaagtaagctagagaaatgaagctgttataaag-aaaatcatagaaaag-aaaaaaacgtacttactattcatagggcagaagtgagtcctcccaaaggtcttcatcttcatcatcttcaggttgattaggctgaggaagaagaaaaaaggttggttttgctgtctctgggttgcagaggcagaagaaaaatctacatataagtgggcccctgcagttcaaactcttgttgttcaagagtcaactgtattacacaggaatttgtgtcactaagaaagtaactatctttagaactgggaactcaaaaatccctttctgataccataaacaaatggcaataaggaccataaaactgagccagtgtgcacccatacaaataggagattatttttgaagata-cctattgaatgcagaagatgggaaagtaattcctttacaagaagcagaagttatgttacatattcttctacaaacaaggtctatttttttcctcattctccataggttggaacctcatgagatatattcacttcttagaacaagc---tgtttttaaaaatgtgctggacaattatcataataatattaattttgttagaacaagagactctgttaccaggctgggcatggtggcttatgcctgtaatcccagcactttgggaggctgaggcaggtatatcacttgaggtcaggagtttgagaccagcctaaccaacatggtgaaactccatctctactaaaaatacaaaaattagccaggcatgagggcaggcacctgtaatcccaact---acttgggaggctaagccaagagaattgcttgaacccaggaggtggagattgcagtgagctaagattgtgccactgcactccagcct-gggtgacagagca i panTro5.chr3 C 0 C 0 s panPan2.chr3 50483 1073 - 205426864 agttgattcttgaataatgtggcagttaggggctctgatccctgtgcagttgaaaatctgagtataactttgactccttccaaactt---a---actaatggcctaccattgactggaagccttgctgataacacaagcagtccatgaacgcatatttggtatgtgctgcattgttatatactatgtttgtacaataaagtaagctagagaaatgaagctgttataaag-aaaatcatagaaaagaaaaaaaacgtacttactattcatagggcagaagtgagtcctcccaaaggtcttcatcttcatcatcttcaggttgattaggctgaggaagaagaaaaaaggttggttttgctgtctctgggttgcagaggcagaagaaaaatctacatataagtgggcccctgcagttcaaactcttgttgttcaagagtcaactgtattacacaggaatttgtgtcactaagaaagtaactatctttagaactgggaactcaaaaatccctttctgataccataaacaaatggcaataaggaccataaaactgagccagtgtgcacccatacaaataggagattatttttgaagata-cctattgaatgcagaagatgggaaagtaattcctttacaagaagcagaagttatgttacatattcttctacaaacaaggtctatttttttcctcattctccataggttggaacctcatgagatatattcacttcttagaacaagc---tgtttttaaaaatgtgctggacaattatcataataatattaattttgttagaacaagagactctgttaccaggctgggcatggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggtatatcacttgaggtcaggagtttgagaccagcctaaccaacatggtgaaactccatctctactaaaaatacaaaaattagccaggcatgagggcaggcacctgtaatcccaact---acttgggaggctaagccaagagaattgcttgaacccaggaggtggagattgcagtgagctaagattgtgccactgcactccagcct-gggtgacagagca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 68976 1069 + 508821 agttgattcttgaataatgtggtggttaggggctctgatccctgtgcagttgaaaatctgagtataactttgactccttccaaactt---a---gctaatagcctaccattgactggaagccttgctgataacacaagcagtccatgaacgcatatttggtatgtgctgcattgttatatactatgtttgtacaataaagtaagctagaggaatgaagctgttataaag-aaaatcatagaaaag-aaaaaa--gtacttactattcataaagcagaagtgagtcctcccaaaggtcttcatcttcatcatcttcaggttgattaggctgaggaagaagaaaaaaggttggttttgctgtctctgggttgcagaggcagaagaaaaatctacatataagtggg-ccctgcagttcaaactcttgttgttcaagggtcaactgtattacacaggaatttgtgtcactaagaaagtaactatctttagaactgggaactcaaaaatccctttctgataccataaacaaatggcaataaggaccataaaactgagccagtgtgcacccatacaaataggagattatttttgaagata-cctattgaatgcagaagatgggaaagtaattcctttacaagaagcagaagttatgttacatattcttctacaaacaaggtctatttttttcctcattctccataggttggaacctcatgagatatattcacttcttagaacaagc---tgtttttaaaaatgtgctggacaattatcataataatattaattttgttggaacaagagactctgttaccaggctgggcatggtggctcatgcctgtaatcctagcactttgggaggctgaggcaggtatatcacttgaggtcaggagtttgagaccagcctaaccaacattgtgaaactccatctttactaaaaatacaaaaattagccaggcatgagggcaggtacctgtaatcccaact---agttgggaggctaagccaagagaattgcttgaacccaggaggtggagattgcagtgagctaagattgtgccactgcactccagcct-gggtgacagagca i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 205650 1071 - 123690457 agttgattcttaaataatgtggcggttaggggctctgacccctgtgcagttgaaaatctgagtaaaactttgactccttccaaactt---a---actaatagcctaccattgactggaagccttgctgat-acacaagcagtccatgaacgcatatttggtatgtgctgcattgttatatactatgtttgtacaataaagtaagctggggaaatgaagctgttataaag-aaaatcatagaaaag-aaaaaaatgtacttactattcataaagcagaagtgagtcctcccaaaggtcttcatcttcatcatcttcaggttgattaggctgaggaggaagaaaaaa-gttggttttgctctctctgggttgcagaggcagaagaaaaatctacatataagtgggcccctgcagttcaaacacttgttgtgcaagggtcaactgtcttacacaggaatttgtgtcactaagaaagtaactatctttagaactgggaactcaaaaatccctttctgataccataaacaaacggcaataaggaccataaagctgagccagtgtgcacccagacaaataagagattatttttgaagata-cctattgaatgcagaagacgggaaagtaattcctctacaagaagcagaagttatgttacatattcttctacaaacgaggtctgttttcttcctcattctccataagttggaacctcatgagatatagtcacttcttagaacaagc---tgttttttaaaatgtgctggacaattatcataataaTATTAATTTTGTTGGAACAAGAGACTCTGTTACCAggctgggcatggtggctcatgcctgtaatcacagcactttgggaggctgaggcaggtatatcacttgaggtcaggagtttgagaccagcctaaccaacatggtgaaaccctatctctactaaaaatacaaaaattagccaggcatgagggcaggcacctgtaatcccaact---acttgggaggctaagccaagagaattgcttgaacctgggaggtggagattgcagtaagctaagattgtgccactgcactccagcctggggtgacagagca i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 34232 1063 - 85730 agttgattcttgaataataaggtggttagtggctctgatccctgtgcagttgaaaatctgagtataactttgactccttccaaactt---a---actaatagcctaccactgactggcagccttactgataacataaacagtccatgaacacatatgtggtatgtgctgcattattagatactatgtttgtacaataaagtaagctagagaaatgaagctgttataaag-aaaatcatagaaaag-gaaaaaatgcacttactattcgtaaagcagaagtgaatcctcccaaagatcttcatcttcatcatcttcaggttgattaggctgaggaagaagaaaaaaggttggttttgctgtctctgggttgcagaggcagaaggaaaatctgcatctcagtgggcccctgcagttcaaactc---ttgtttgagggtcaactgtattacacaggagtctgtgtcactaagaaagtaactctcttcagaactgggagctcaacaatccctttctgataccgtaaacaaatggaaataagaaccataaaactgagccagtgtgcacccacacaaataggagattatttctgaagata-cctactgaatgcagaagatgggaaagtaactcctttacaagaagcagaagttatgctacgtatgcttatacaaacaaggtctatttttttcctcattctccataagttggaacctcatgaggtatattcacttcttagaacaagc---tatttttaaaaatgtgctgaacaatt------aaaatattaattttgttggaacaagatactctgttaccaggctgggcgcagtggctcatgcttgtaatcccagcactttgggaggctgaggcaggccgatcacttgagatcaggagtttgagaccagcctaaccaacatggtgaaaccccatgtctactaaaaatacaaaaattagccaggcacggggacaagcacctgtaatcccaact---acttgggaggctaagccaagagaattgcttgaacccaggaggtggagattgtagtgagccaagattgtgccactgcactccagcct-gggtgacagagca i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 54541 1065 - 181584905 agttgattcttgaataataaggtggttagtggctctgatccctgtgcagttgaaaatctgagtataactttgactccttccaaactt---a---actaatagcctaccactgactggcagccttactgataacataaacagtccatgaacacatatgtggtatgtgctgcattattagatactatgtttgtacaataaagtaagctagagaaatgaagctgttataaag-aaaatcatagaaaag-gaaaaaatgcacttactattcgtaaagcagaagtgaatcctcccaaagatcttcatcttcatcatcttcaggttgatcaggctgaggaagaagaaaaaaggttggttttgctgtctctgggttgcagaggcagaaggagaatctgcatctcagtgggcccctgcagttcaaactc-cgttgtttgagggtcacctgtattacacaggagtctgtgtcactaagaaagtaactctcttcagaactgggggctcaacaatccctttctgataccgtaaacaaatggaaataagaaccataaaactgagccagtgtgcacccatacaaataggagattatttctgaagata-cctactgaatgcagaagatgggaaagtaactcctttacaagaagcagaagttatgctacgtatgcttatacaaacaaggtctatttttttcctcattctccataagttggaacctcatgaggtatattcacttcttagaacaagc---tattttTAAAAATGTGCTGAACAATT------AAAATATTAATTTTGTTGGAACAAGATACTCTGTTACCAggctgggcgcagtggctcatgcttgtaatcccagcactttgggaggctgaggcaggccgatcacttgagatcaggagtttgagaccagcctaaccaacatggtgaaaccccatgtctactaaaaatacaaaaattagccaggcacggggacaagcacctgtaatcccaact---acttgggaggctaagccaagagaattgcttgaacccaggaggtggagattgtagtgagccaagattgtgccactgcactccagcct-gggtgacagagca i macFas5.chr6 C 0 I 140 s macNem1.NW_012020287v1 50852 1066 + 4899514 agttgattcttgaataataaggtggttagtggctctgatccctgtgcagttgaaaatctgagtataactttgactccttccaaactt---a---actaatagcctaccattgactggcagccttactgataacataaacagtccatgaacgcatatgtggtatgtgctgcattattagatactatgtttgtacaataaagtaagctagagaaatgaagctgttataaag-aaaatcatagaaaag-gaaaaaatgcacttactattcgtaaagcagaagtgaatcctcccaaaaatcttcatcttcatcatcttcaggttgattaggctgaggaagaagaaaaaaggttggttttgctgtctctgggttgcagaggcagaaggaaaatctgcatctcagtgggcccctgcagttcaaactc-tgttgtttgagggtcaactgtattacacaggagtctgtgccactaagaaagtaactgtcttcagaactgggagctcaacaatccctttctgataccgtaaacaaatggaaataagaaccataaaactgagccagtgtgcacccatacaaataggaggttatttctgaagataccctactgaatgcagaagatgggaaagtaactcctttacaagaagcagaagttatgctacgtatgcttatacaaacaaggtctatttttttcctcattctccgtaagttggaacctcatgaggtatattcacttcttagaacaagc---tatttttaaaaatgtgctgaacaatt------aaaatattaattttgttggaacaagatactctgttaccaggctgggcgcagtggctcatgcttgtaatcccagcactttgggaggctgaggcaggccgatcacttgagatcaggagtttgagaccagcctaaccaacatggggaaaacccatgtctactaaaaatacaaaaattagccaggcacggggacaagcacctgtaatcccaact---acttgggaggctaagccaagagaattgcttgaacccaggaggtggagattgtagtgagccaagattgtgccactgcactccagcct-gggtgacagagca i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 49433 1065 + 97742 agttgattcttgaataataaggtggttagtggctctgatccctgtgcagttgaaaatctgagtataactttgactccttccaaactt---a---actaatagcctaccattgactggcagccttactgataacataaacagtccatgaacacatatgtggtatgtgctgcattattagatactatgtttgtacaataaagtaagctagagaaatgaagctgttataaag-aaaatcatagaaaag-gaaaaaatgcacttactattcataaagcagaagtgaatcctcccaaagatcttcatcttcatcatcttcaggttaattaggctgaggaagaagaaaaaaggttggttttgctgtctctgggttgcaaaggcagaaggaaaatctacatctcagtgggcccctgcagttcaaactc-tgttgtttgagggtcaactgtattacacaggagtctgtgtcactaagaaagtaactctcttcagaactgggagctcaacaatccctttctgataccgtaaacaaatggaaataagaaccataaaactgagccagtgtgcacccatacaaataggagattatttttgaagata-cctactgaatgcagaagatgggaaagtaactcctttacaagaagcagaagttatgctacgtatgcttatacaaacaaggtctatttttttcctcattctccacaagttggaacctcatgaggtatattcacttcttagaacaagc---tatttttaaaaatgtgctgaacaatt------aaaatattaattttgttggaacaagatactctgttaccaggctgggcgcagtggctcatgcttgtaatcccagcactttgggaggctgaggcaggcagatcacttgagatcaggagtttgagaccagcctaaccaacatggtgaaaccccatgtctactaaaaatacaaaaattagccaggcacggggacaagcacctgtaatcccaact---acttgggaggctaagccaagagaattgcttgaacccaggaggtggagattgtagtgagccaagattgtgccactgcactccagcct-gggtgacagagca i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3700458 1066 - 108555830 agttgattcttgaatgttgtgggagttagggactctgatccctgtgcagttgaaaatctgagtataactttgactccttccaaacgt---aactactaatagcctaccgttgactggaaactttactgataacataaacagtcgatgaacacatagttggtatgtgttgcactattatatactatgcttttagaatcaaataagctagagaaatgaagctgttacaaagaaaaatcatagaaaag-aaaaaaacatacctactattcataaa-cataagtgaatcctcccaaaggtcttcatcttcatcatcttcaggttaattaggctgaggaggaag-aaaatggttggttttgctgtctcttggttgcagaagcagaagaaaaatctgcatataagtggacccctgcagttcaaactc-ttattgttcaaggtcaagtgtattacacaggaatttgtgtcactaagaaagtaactgtctttagaactgggaattcaacaatccctttctgataccataaacaaatggcagtaagaaccataaaactgagccattgtgcacccatacaaataggagattatttctgaagata-cctactgaatgcagaagatagaaaactaattccttcccaagaagcagaagttatgttacatattcttatacaaacaaggtcta-cttttaatttattcaccataagttggaacctcatgagatatattcacttcttagaacaagc---tgtgtttttttatgtgctggataatt---ataataataGTAattttgttgggacaagataatctgttcccaggctgggcgtggtggctcatgcatgtaatcccagcac-ttgggaggccaaggaaggcagatcacttgaggtcaggggtttgagaccagcctggccaacatggtgaaaccctatctctactaaaagtacaaaaattagccaggcgtgggggtgggcacccatattcccaact---actcgggaggctgaggcaggagaattgtttgaaccttggagatggagattgcagtgagccgagaacgtgccactgcactccagcct-gggtgacagag-- i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 49683 1021 + 85016 AGTTGATTCTTGAATAATAAGGTGGTTAGTGGCTCTGATCCCTGTGCAGTTGAAA--------------------------------------------------accattgactggcagccttactgataacataaacagtccatgaacacatatgtggtatgtgctgcattattagatactatgtttgtacaataaagtaagctagagaaatgaagctgttataaag-aaaatcatagaaaag-gaaaaaatgcacttactattcataaagcagaagtgaatcctcccaaagatcttcatcttcatcatcttcaggttaattaggctgaggaagaagaaaaaaggttggttttgctgtctctgggttgcagaggcagaaggaaaatctacatctcagtgggcccctgcagttcaaactc-tgttgtttgagggtcaactgtattacacaggagtctgtgtcactaagaaagtaactctcttcagaactgggagctcaacaatccctttctgataccgtaaacaaatggaaataagaaccataaaactgagccagtgtgcactcatacaaataggagattatttttgaagata-cctactgaatgcagaagatgggaaagtaactgctttacaagaagcagaagttatgctacatatgcttatacaaacaaggtctatttttttcctcattctccacaagttggaacctcatgaggtatattcacttcttaaaacaagc---tatttttaaaaatgtgctgaacaatt------aaaatattaattttgttggaacaagatactctgttaccaggctgggcgcagtggctcatgcttgtaatcccagcactttgggaggctgaggcaggcagatcacttgagatcaggagtttgagaccagcctaaccaacatggtgaaaccccatgtctactaaaaatacaaaaattagccaggaacggggacaagcacctgtaatcccaact---acttgggaggctaagccaagagaattgcttgaacccaggaggtggagattgtagtgagccaagattgtgccactgcactccagcct-gggtgacagagca i manLeu1.NW_012101680v1 C 0 C 0 s saiBol1.JH378197 17528 1026 + 8899380 agttgattcttcaataatgtaggggttagggactctgatccctgtgcagttgaaaatctgagtataac--tgactccttccaatcttaact---attaatagccgaccattgactggaagccttactg-----ataaatagtcgatgaacacatatttggtatgtgttgcattattatatactatgttcttacaataaaataaggtagagaaatgaagcttttataaag-aaaattgtagaaaag-aaaaaaatatatttactattca-aaagcataagtgaattctcccaaaggtcttcatcttcatcatattcaggttgattaggctgaagaggaagaaaaaagtttggttttgctgtctctggtttgcagaggcagaagaaaaatctacatgtaagtgggcccctgcagttcaaactcttgttgttcaagggtcaactgtattacacaggaatttgtgtcactaagaaagtaactatctttagaactgggaactcaatgatctctttctgataccataaacaaatg--------agtcata----------agtgtacacccatacaaat---agattatttttgaagtta-cctattgaatgcggaaggcagaaaagtaattcctttccaagagg-agaagttatattacgtattcttatacaaacaaggtcttttttttactttagtcttcataagttggaacctcatgagacatacttacttcctagaacaagc---tgcattttattatatgctggataattctcacaataaTGGTGATTTTGTTGGAACAAGATACTCTGTTACCAGGGTCAgcatggtggctcatacctgtaaccttagcactttgggaggccgaagcaagtgaatcacttgaggtcatcagtttgagactaccctggccaacatggtgaaa-cccatctctactaaaaatacaaaaattagccattcatgggggcagtcacctgtaatctcaact---acttgggaggctgaggcaagagaattgcttgagcccgggaggtggaaattgcagtgagctgagattgcacaactgcatt--------cA----------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4408650 1043 + 4432243 agttgattcttgaataatgtgggagttagagattctgacccttgtgcagttgaaaatctgagaaaatt--tgactccttccaaactt---t---actaatagtctaccattgactggaagccttactgataaaataaacaggtgatgaacacatatttggtatgtgttatattattatatgttatgttcttacaataaaataagctagaaaaatgaagcttttataaag-aaaatcatagaaaag-aaaaaaatatacttgctattcataaagcataagttaatcctcccaaaagtctttatcttcatcatcttcaggttgattaggctgaagagaaagaaaaaagttcagttttgctgtttctggtttgcagaggcagaagaagaatctgcatataagtgaacccctgcagttcaaactcttgttattcaagggtcaactgtattacacaggaatttttgtcactaagaaagtaactatctttagaactgggaactcaacaatctctttctgataccataaacaaatatgaataataatcataaaa------cagtgtacatccatacaaatagaagattgcttttgaagata-cctattgaattctgaagactgaaaagtaattcctttccaagaagcagaagttat-----gtattcttatataaacaaggtctattttttacttcattctccatcagttggaacctcatgagatatattcacttcttagaacaagcttttttcttttaatatgtgctggataattatcacagtcatagtgattttgttggaa-aaaatactctgttaccaggctgggcgtggtggctcatgcctgtaatctcagcgctttgggaggttgaggcaggtggatcacttgaggccatgagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacagg-----------cactgggtcaggcacctgtaatttcaact---gattgggaggctgaggcagaggaattgcttgagctcaggaggtggagatttcagtgagctgagattgtgccactgtact--------gggtgacatagaa i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2501979 1027 + 12154212 agttgattcttgaataatttgggagttagggattctgatccctgtgcagttgaaaatctgagtataactttgactccttccaaactt---t---actaatagtctaccattgactggaagccttactgataacataaacaggtgatgaacacatatttggtatgtgttacattattatatgttatgttcttacaataaaataagctagaaaaatgaagcttttat-----------------aag-aaagaaatatacttactattcataaagcataagtgaatcctcccaaaagtctttatcttcatcatcttcaggttgattaggctgaagagaaagaaaaaagttcagttttgctgtctctggtttgcagaggcagaagaaaaatctgcatataagtgaacccctgcagttcaaactcttgttattcaagggtcaactttattacacaggaatttttgtcactaagaaagtaactatctttagaactgggaactcaacaatctctttctgagaccataaacaaatgtgaataagaatcattaaa------cagtgttcatccatacaaatagaagattgcttttgaagata-cctattgaattctgaagacagaaaggtaa-----ttccaagaagcagaagttat-----gtattcttatacaaaaaaggtctactttttacttcattctccataagttggaacctcatgagatatattcacttcttagaacaagcttttttcttttaatatgtgcttgataattatcacaatcatagtgattttgttggaa-aaaatactctgttgccaggctgggcatggtggctcatgcctgtaatctcagcactttgggaggccgaggcaggtggatcacttgaggccatgagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacagg-----------cactggggcaggcacctataatttcaactaaaaattgggagtctgaggcaggggaattgcttgagctcaggaggtggagatttcagtgagctgagattgtgccactgtact--------gggtgacatagga i aotNan1.NW_018507789v1 C 0 C 0 e canFam3.chr2 79077015 1063 - 85426708 I e dasNov3.JH570393 1691127 327 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e calJac3.chr18 46470284 8193 - 47448759 M e colAng1.NW_012116822v1 1028224 1911 - 1267912 I a score=95336.000000 s hg38.chr3_KI270784v1_alt 163612 17 + 184404 agactcaagactccatc s panTro5.chr3 56607 17 - 202621043 agactcaagactccatc i panTro5.chr3 C 0 C 0 s panPan2.chr3 51556 17 - 205426864 agactcaagactccatc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 70045 17 + 508821 agactcatgactccatc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 206721 17 - 123690457 agactcaagactccatc i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 35295 17 - 85730 agactcaagactccatc i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 55746 17 - 181584905 agactcaagactccatc i macFas5.chr6 I 140 C 0 s macNem1.NW_012020287v1 51918 17 + 4899514 agactcaagactccatc i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 50498 17 + 97742 agactcaagactccatc i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3701524 12 - 108555830 -----caagattccatc i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 50704 17 + 85016 agactcaagactccatc i manLeu1.NW_012101680v1 C 0 C 0 s saiBol1.JH378197 18554 9 + 8899380 --------GGCTCCTTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4409693 13 + 4432243 ----gcacgacttcatc i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2503006 13 + 12154212 ----gcacgacttcatc i aotNan1.NW_018507789v1 C 0 C 0 e canFam3.chr2 79077015 1063 - 85426708 I e dasNov3.JH570393 1691127 327 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e calJac3.chr18 46470284 8193 - 47448759 M e colAng1.NW_012116822v1 1028224 1911 - 1267912 I a score=11825.000000 s hg38.chr3_KI270784v1_alt 163629 2 + 184404 tc s panTro5.chr3 56624 2 - 202621043 tc i panTro5.chr3 C 0 I 2 s panPan2.chr3 51573 2 - 205426864 tc i panPan2.chr3 C 0 I 2 s gorGor5.CYUI01015884v1 70062 2 + 508821 tc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 206738 2 - 123690457 tc i nomLeu3.chr11 C 0 I 5 s rheMac8.chrUn_NW_014858614v1 35312 2 - 85730 tc i rheMac8.chrUn_NW_014858614v1 C 0 I 398 s macFas5.chr6 55763 2 - 181584905 tc i macFas5.chr6 C 0 I 3 s macNem1.NW_012020287v1 51935 2 + 4899514 tc i macNem1.NW_012020287v1 C 0 I 3 s cerAty1.NW_012005170v1 50515 2 + 97742 tc i cerAty1.NW_012005170v1 C 0 I 2 s chlSab2.chr12 3701536 2 - 108555830 tc i chlSab2.chr12 C 0 I 2 s manLeu1.NW_012101680v1 50721 2 + 85016 tc i manLeu1.NW_012101680v1 C 0 I 5 s saiBol1.JH378197 18563 2 + 8899380 TG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4409706 2 + 4432243 ta i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2503019 2 + 12154212 tg i aotNan1.NW_018507789v1 C 0 C 0 s dasNov3.JH570393 1691454 2 - 2296528 tc i dasNov3.JH570393 I 327 C 0 e canFam3.chr2 79077015 1063 - 85426708 I e otoGar3.GL873538 19630652 20804 - 27850971 I e calJac3.chr18 46470284 8193 - 47448759 M e colAng1.NW_012116822v1 1028224 1911 - 1267912 I a score=62160.000000 s hg38.chr3_KI270784v1_alt 163631 9 + 184404 aaaaaaaaa s panTro5.chr3 56628 9 - 202621043 aaaaaaaaa i panTro5.chr3 I 2 C 0 s panPan2.chr3 51577 9 - 205426864 aaaaaaaaa i panPan2.chr3 I 2 C 0 s gorGor5.CYUI01015884v1 70064 9 + 508821 aaaaaaaaa i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 206745 9 - 123690457 aaaaaaaaa i nomLeu3.chr11 I 5 C 0 s macFas5.chr6 55768 9 - 181584905 aaaaaaaaa i macFas5.chr6 I 3 C 0 s macNem1.NW_012020287v1 51940 9 + 4899514 aaaaaaaaa i macNem1.NW_012020287v1 I 3 C 0 s cerAty1.NW_012005170v1 50519 9 + 97742 aaaaaaaaa i cerAty1.NW_012005170v1 I 2 C 0 s chlSab2.chr12 3701540 9 - 108555830 aaaacaaaa i chlSab2.chr12 I 2 C 0 s manLeu1.NW_012101680v1 50728 9 + 85016 aaaaaaaaa i manLeu1.NW_012101680v1 I 5 C 0 s saiBol1.JH378197 18565 9 + 8899380 AAAAAAAAA i saiBol1.JH378197 C 0 I 196 s cebCap1.NW_016107581v1 4409708 9 + 4432243 aaaaaaaaa i cebCap1.NW_016107581v1 C 0 I 3 s aotNan1.NW_018507789v1 2503021 9 + 12154212 aaaaaaaaa i aotNan1.NW_018507789v1 C 0 I 1 s dasNov3.JH570393 1691456 9 - 2296528 attagaaca i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79077015 1063 - 85426708 I e otoGar3.GL873538 19630652 20804 - 27850971 I e calJac3.chr18 46470284 8193 - 47448759 M e colAng1.NW_012116822v1 1028224 1911 - 1267912 I e rheMac8.chrUn_NW_014858614v1 35314 398 - 85730 I a score=392944.000000 s hg38.chr3_KI270784v1_alt 163640 89 + 184404 aaaatgctctgttac-cattaggcaaaagatgatcttaataaatattccattagccaaactctaggctcaaaaa----------attataataaaattat s panTro5.chr3 56637 89 - 202621043 aaaatgctctgttac-cattaggcaaaagatgatcttaataaatattccattagccaaactctaggctcaaaaa----------attataataaaattat i panTro5.chr3 C 0 C 0 s panPan2.chr3 51586 89 - 205426864 aaaatgctctgttac-cattaggcaaaagatgatcttaataaatattccattagccaaactgtaggctcaaaaa----------attataataaaattat i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 70073 89 + 508821 aaaatactctgttac-cgttaggcaaaagacgatcttaataaatattccattagccaaactctaggctcaaaaa----------attataataaaattat i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 206754 84 - 123690457 aaaaTACTCTGTTAC-CATTAGGCAAAAGATGATCTTAATAAA-----CATTAGCCAAACTCTAGGCTCAAAAA----------ATTATAATAAAATTGT i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 55777 42 - 181584905 aaaatactctgttac-cattaggcaaaagatgatcataataaa--------------------------------------------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 51949 84 + 4899514 aaaatactctgttac-cattaggcaaaagatgatcataataaatattacagtagccaaactctaggctcaaaaa---------------aatataataaa i macNem1.NW_012020287v1 C 0 I 5 s cerAty1.NW_012005170v1 50528 84 + 97742 aaaaacctctgttac-cattaggcaaaagatgatcataataaatattacagtagccaaactctaggctcaaaaa---------------aataaaattat i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3701549 100 - 108555830 aaaaaactctggtaagcattaggcaagagatgattataatgaatattccaatagccaaactctaggctcaaaaaatttttttaaattataataaaattat i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 50737 84 + 85016 aaaaaactctgttac-catttggcaaaagatgatcataataaatattacagtagccaaactctaggctcaaaaa---------------aataaaattat i manLeu1.NW_012101680v1 C 0 C 0 s cebCap1.NW_016107581v1 4409720 89 + 4432243 aagatactctgttat-cattaggcaaaagatgatcataataaatattccaatagccaaactctaggctcaaaaa----------attataacaaaattat i cebCap1.NW_016107581v1 I 3 C 0 s aotNan1.NW_018507789v1 2503031 89 + 12154212 aaaatactctgttat-cattaggcaaaagatgatcataataaatattccaatagccaaactctaggctcaaaaa----------attataataaaattat i aotNan1.NW_018507789v1 I 1 C 0 s dasNov3.JH570393 1691465 88 - 2296528 agtgtactttattgc-tattaaccaaaagattagcaaaataaatacca-agtagtccaaatgtggatttgacaa----------attttaataaaaaggc i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79077015 1063 - 85426708 I e otoGar3.GL873538 19630652 20804 - 27850971 I e calJac3.chr18 46470284 8193 - 47448759 M e saiBol1.JH378197 18574 196 + 8899380 I e colAng1.NW_012116822v1 1028224 1911 - 1267912 I e rheMac8.chrUn_NW_014858614v1 35314 398 - 85730 I a score=1365.000000 s hg38.chr3_KI270784v1_alt 163729 1 + 184404 a s nomLeu3.chr11 206838 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012020287v1 52038 1 + 4899514 a i macNem1.NW_012020287v1 I 5 C 0 s cebCap1.NW_016107581v1 4409809 1 + 4432243 a i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2503120 1 + 12154212 a i aotNan1.NW_018507789v1 C 0 C 0 s dasNov3.JH570393 1691553 1 - 2296528 a i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79077015 1063 - 85426708 I e otoGar3.GL873538 19630652 20804 - 27850971 I e calJac3.chr18 46470284 8193 - 47448759 M e cerAty1.NW_012005170v1 50612 0 + 97742 C e saiBol1.JH378197 18574 196 + 8899380 I e colAng1.NW_012116822v1 1028224 1911 - 1267912 I e rheMac8.chrUn_NW_014858614v1 35314 398 - 85730 I e manLeu1.NW_012101680v1 50821 0 + 85016 C e chlSab2.chr12 3701649 0 - 108555830 C e macFas5.chr6 55819 0 - 181584905 C e panPan2.chr3 51675 0 - 205426864 C e gorGor5.CYUI01015884v1 70162 0 + 508821 C e panTro5.chr3 56726 0 - 202621043 C a score=10846.000000 s hg38.chr3_KI270784v1_alt 163730 13 + 184404 aaaatggttcaca s macNem1.NW_012020287v1 52039 13 + 4899514 aaaatggttcaca i macNem1.NW_012020287v1 C 0 I 1 s cebCap1.NW_016107581v1 4409810 13 + 4432243 aaaatggttcaca i cebCap1.NW_016107581v1 C 0 I 3 s aotNan1.NW_018507789v1 2503121 13 + 12154212 aaaatggttcaca i aotNan1.NW_018507789v1 C 0 I 1 s dasNov3.JH570393 1691554 13 - 2296528 aaagtgtttcaca i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79077015 1063 - 85426708 I e otoGar3.GL873538 19630652 20804 - 27850971 I e calJac3.chr18 46470284 8193 - 47448759 M e cerAty1.NW_012005170v1 50612 0 + 97742 C e saiBol1.JH378197 18574 196 + 8899380 I e colAng1.NW_012116822v1 1028224 1911 - 1267912 I e rheMac8.chrUn_NW_014858614v1 35314 398 - 85730 I e manLeu1.NW_012101680v1 50821 0 + 85016 C e chlSab2.chr12 3701649 0 - 108555830 C e macFas5.chr6 55819 0 - 181584905 C e nomLeu3.chr11 206839 0 - 123690457 C e panPan2.chr3 51675 0 - 205426864 C e gorGor5.CYUI01015884v1 70162 0 + 508821 C e panTro5.chr3 56726 0 - 202621043 C a score=-5361.000000 s hg38.chr3_KI270784v1_alt 163743 78 + 184404 gtaccgggaggcggagcttgcagt--gagccgagatcccgtcactgcactccagcctgggcgacagagcgagactccgtc s macFas5.chr6 55819 24 - 181584905 -ta--------------ttacagt---agccaa--------------actctag------------------------gc i macFas5.chr6 C 0 C 0 s dasNov3.JH570393 1691567 32 - 2296528 ataacagaatg------ctacagttaaatttgt--------------gcccc---------------------------- i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79077015 1063 - 85426708 I e otoGar3.GL873538 19630652 20804 - 27850971 I e aotNan1.NW_018507789v1 2503134 1 + 12154212 I e cebCap1.NW_016107581v1 4409823 3 + 4432243 I e calJac3.chr18 46470284 8193 - 47448759 M e cerAty1.NW_012005170v1 50612 0 + 97742 C e saiBol1.JH378197 18574 196 + 8899380 I e colAng1.NW_012116822v1 1028224 1911 - 1267912 I e rheMac8.chrUn_NW_014858614v1 35314 398 - 85730 I e manLeu1.NW_012101680v1 50821 0 + 85016 C e chlSab2.chr12 3701649 0 - 108555830 C e macNem1.NW_012020287v1 52052 1 + 4899514 I e nomLeu3.chr11 206839 0 - 123690457 C e panPan2.chr3 51675 0 - 205426864 C e gorGor5.CYUI01015884v1 70162 0 + 508821 C e panTro5.chr3 56726 0 - 202621043 C a score=3074.000000 s hg38.chr3_KI270784v1_alt 163821 19 + 184404 tcaaaaaaaaaaaaaaaaa s macFas5.chr6 55843 19 - 181584905 tcaaaaaaatataataaaa i macFas5.chr6 C 0 I 4 s saiBol1.JH378197 18770 19 + 8899380 tcaaaatattataataaaa i saiBol1.JH378197 I 196 I 4 e canFam3.chr2 79077015 1063 - 85426708 I e dasNov3.JH570393 1691599 0 - 2296528 C e otoGar3.GL873538 19630652 20804 - 27850971 I e aotNan1.NW_018507789v1 2503134 1 + 12154212 I e cebCap1.NW_016107581v1 4409823 3 + 4432243 I e calJac3.chr18 46470284 8193 - 47448759 M e cerAty1.NW_012005170v1 50612 0 + 97742 C e colAng1.NW_012116822v1 1028224 1911 - 1267912 I e rheMac8.chrUn_NW_014858614v1 35314 398 - 85730 I e manLeu1.NW_012101680v1 50821 0 + 85016 C e chlSab2.chr12 3701649 0 - 108555830 C e macNem1.NW_012020287v1 52052 1 + 4899514 I e nomLeu3.chr11 206839 0 - 123690457 C e panPan2.chr3 51675 0 - 205426864 C e gorGor5.CYUI01015884v1 70162 0 + 508821 C e panTro5.chr3 56726 0 - 202621043 C a score=5005.000000 s hg38.chr3_KI270784v1_alt 163840 1 + 184404 a s panTro5.chr3 56726 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 51675 1 - 205426864 a i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 70162 1 + 508821 a i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 35712 1 - 85730 a i rheMac8.chrUn_NW_014858614v1 I 398 C 0 s macFas5.chr6 55866 1 - 181584905 a i macFas5.chr6 I 4 C 0 s cerAty1.NW_012005170v1 50612 1 + 97742 a i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3701649 1 - 108555830 a i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 50821 1 + 85016 a i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1030135 1 - 1267912 a i colAng1.NW_012116822v1 I 1911 C 0 s saiBol1.JH378197 18793 1 + 8899380 a i saiBol1.JH378197 I 4 C 0 e canFam3.chr2 79077015 1063 - 85426708 I e dasNov3.JH570393 1691599 0 - 2296528 C e otoGar3.GL873538 19630652 20804 - 27850971 I e aotNan1.NW_018507789v1 2503134 1 + 12154212 I e cebCap1.NW_016107581v1 4409823 3 + 4432243 I e calJac3.chr18 46470284 8193 - 47448759 M e macNem1.NW_012020287v1 52052 1 + 4899514 I e nomLeu3.chr11 206839 0 - 123690457 C a score=82837.000000 s hg38.chr3_KI270784v1_alt 163841 14 + 184404 aaaaTGGTTCACAG s panTro5.chr3 56727 14 - 202621043 aaaatggttcacag i panTro5.chr3 C 0 C 0 s panPan2.chr3 51676 14 - 205426864 aaaatggttcacag i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 70163 14 + 508821 aaaatggttcacag i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 206839 14 - 123690457 AAAATGGTTCACAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 35713 14 - 85730 aaaatggttcacaa i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 55867 14 - 181584905 aaaatggttcacaa i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 50613 14 + 97742 aaaatggttcacaa i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3701650 14 - 108555830 aaaatggttcacaa i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 50822 14 + 85016 aaaatggttcacaa i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1030136 14 - 1267912 aaaatggttcacaa i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 18794 14 + 8899380 aaaatggttcacaa i saiBol1.JH378197 C 0 C 0 s dasNov3.JH570393 1691599 10 - 2296528 ----tgattgtcac i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79077015 1063 - 85426708 I e otoGar3.GL873538 19630652 20804 - 27850971 I e aotNan1.NW_018507789v1 2503134 1 + 12154212 I e cebCap1.NW_016107581v1 4409823 3 + 4432243 I e calJac3.chr18 46470284 8193 - 47448759 M e macNem1.NW_012020287v1 52052 1 + 4899514 I a score=194196.000000 s hg38.chr3_KI270784v1_alt 163855 29 + 184404 TAACAAAAATATAACGCCTAATGCATTGT s panTro5.chr3 56741 29 - 202621043 taacaaaaatatAACACCTAATGCATTGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 51690 29 - 205426864 taacaaaaatatAACACCTAATGCATTGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 70177 28 + 508821 taac-aaaATATAACACCTAATGCATTGT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 206853 29 - 123690457 TAACAAAAATATAACACCTAATGCATTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 35727 29 - 85730 taacaaaaatatAACACCAAATGCATTGT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 55881 29 - 181584905 taacaaaaatatAACACCAAATGCATTGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 52053 29 + 4899514 taacaaaaatatAACACCAAATGCATTGT i macNem1.NW_012020287v1 I 1 C 0 s cerAty1.NW_012005170v1 50627 29 + 97742 taacaaaaatatAACACCAAATGCATTGT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3701664 29 - 108555830 taacaaaAGTATAACACCTAATGTGTTGT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 50836 29 + 85016 taacaaaaatatAACACCAAATGCATTGT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1030150 29 - 1267912 taacaaaaatatAACACCGAATGCATTGT i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 18808 22 + 8899380 taacaaaaatgtAACACCTAAT------- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018507789v1 2503135 29 + 12154212 taacaaaaatatAAGACCTAATGCATTGT i aotNan1.NW_018507789v1 I 1 C 0 s dasNov3.JH570393 1691609 12 - 2296528 taactgtagtat----------------- i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79077015 1063 - 85426708 I e otoGar3.GL873538 19630652 20804 - 27850971 I e cebCap1.NW_016107581v1 4409823 3 + 4432243 I e calJac3.chr18 46470284 8193 - 47448759 M a score=9555.000000 s hg38.chr3_KI270784v1_alt 163884 1 + 184404 A s panTro5.chr3 56770 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 51719 1 - 205426864 A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 70205 1 + 508821 A i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 206882 1 - 123690457 A i nomLeu3.chr11 C 0 M 1089 s rheMac8.chrUn_NW_014858614v1 35756 1 - 85730 A i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 55910 1 - 181584905 A i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 52082 1 + 4899514 A i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 50656 1 + 97742 A i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3701693 1 - 108555830 A i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 50865 1 + 85016 A i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1030179 1 - 1267912 A i colAng1.NW_012116822v1 C 0 C 0 s cebCap1.NW_016107581v1 4409826 1 + 4432243 a i cebCap1.NW_016107581v1 I 3 C 0 s aotNan1.NW_018507789v1 2503164 1 + 12154212 A i aotNan1.NW_018507789v1 C 0 C 0 s dasNov3.JH570393 1691621 1 - 2296528 a i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79077015 1063 - 85426708 I e otoGar3.GL873538 19630652 20804 - 27850971 I e calJac3.chr18 46470284 8193 - 47448759 M e saiBol1.JH378197 18830 0 + 8899380 C a score=629543.000000 s hg38.chr3_KI270784v1_alt 163885 77 + 184404 CAATCTAAACTGTATAAAGGCACcattaatttagtacatatttatcaaactacttctataagttaggtttggcaaat s panTro5.chr3 56771 77 - 202621043 CAATCTAAACTGTATAAAGACACcattaatttagtacatatttatcaaactacttctataagttaggtttggcaaat i panTro5.chr3 C 0 C 0 s panPan2.chr3 51720 77 - 205426864 CAATCTAAACTGTAAAAAGACACcattaatttagtacatatttatcaaactacttctataagttaggtttggcaaat i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 70206 77 + 508821 CAATCTAAACTGTATAAAGACACCATTAATTTAGTACATATTTATCAAACTACTTCTATAAGTTAGGTTTGGCAAAT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 35757 77 - 85730 CAATCTGAACTGTATAAAGACACCATTAATTTAGTACATATTTATCAAACCACTTCTATAAGTTAGGTTTGGCAAAT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 55911 77 - 181584905 CAATCTGAACTGTATAAAGACACCATTAATTTAGTACATATTTATCAAACCACTTCTATAAGTTAGGTTTGGCAAAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 52083 77 + 4899514 CAATCTGAACTGTATAAAGACACCATTAATTTAGTACATATTTATCAAACCACTTCTATAAGTTAGGTTTGGCAAAT i macNem1.NW_012020287v1 C 0 I 89 s cerAty1.NW_012005170v1 50657 77 + 97742 CAATCTGAACTGTGTAAAGACACCATTAATTTAGTACATATTTATCAAACCACTTCTATAAGTTAGGTTTGACAAAT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3701694 77 - 108555830 CAATCTGAACTGTATAAAGACACCGTTAATTTAGTATATATTTATCAAACCACTTCTATAAGTTAGGTTTGGCAAAT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 50866 77 + 85016 CAATCTGAACTGTGTAAAGACACCATTAATTTAGTACATATTTATCAAACCACTTCTATAAGTTAGGTTTGACAAAT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1030180 77 - 1267912 CAATCTGAACTGTATAAAGACACCATTAATTTAGTACATATTTATCAAACCACTTGTATAAGTTAGGTTTGACAAAT i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 18830 70 + 8899380 -------AACTGTATAAAAACACCTTAAATTTAGTACATACTTATCAAACCACTTCTATAAGTTAGGTTTGGCAAAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4409827 77 + 4432243 caaTCTGAATTGTATAAAGACACCTTAAATTTTGTGCATATGTATCAAACCATTTCTATAAGTTAAGTTTGGCAAAT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2503165 77 + 12154212 CAATCTGAACTGTATAAAGACACCTTAAATGTTGTGCATATTTATCAAACCATTTCTATAAGTTAAGTGTGGCAAAT i aotNan1.NW_018507789v1 C 0 C 0 s dasNov3.JH570393 1691622 77 - 2296528 caacctgaacTTCATGAAGACCCCTTTAATTTAGTGGACAGTTGTCAAAGAACTTCTGTAAATCAAGTTTTGCAAGT i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79077015 1063 - 85426708 I e otoGar3.GL873538 19630652 20804 - 27850971 I e calJac3.chr18 46470284 8193 - 47448759 M e nomLeu3.chr11 206883 1089 - 123690457 M a score=391137.000000 s hg38.chr3_KI270784v1_alt 163962 87 + 184404 tgcagcagaca-aagatgga--------------------------------------attga----------------------------------------------------------------atag-tttttgtctttaaggtgctcataat--------agaatacagataactaTTTAATTTTTGTG-TTTTT s panTro5.chr3 56848 85 - 202621043 tgcagcagaca-aagatgga--------------------------------------attga----------------------------------------------------------------atag-tttttgtctttaaggtgctcataat--------agaatacagataactaTTTAATTTTTGTG-TTT-- i panTro5.chr3 C 0 C 0 s panPan2.chr3 51797 85 - 205426864 tgcagcagaca-aagatgga--------------------------------------attga----------------------------------------------------------------atag-tttttgtctttaaggtgctcataat--------agaatacagataactaTTTAATTTTTGTG-TTT-- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 70283 87 + 508821 TGCGGCAGACA-AAGATGGA--------------------------------------ATTGA----------------------------------------------------------------ATAG-TTTTTGTCTTTAAGGTGTTCATAAT--------AGAATACAGATAACTATTTAATTTTTGTG-TTTTT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 35834 87 - 85730 CGCAGCAGAT--AAGATGGA--------------------------------------ATTGA----------------------------------------------------------------ATAG-TTTTTGTCTTTAAGGTACTCATAAT--------AGAATACAGATAACTATTTAATTTTTGTGTTTTTT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 55988 81 - 181584905 CGCAGCAGAT--AAGATGGA--------------------------------------ATTGA----------------------------------------------------------------ATAG-TTTTTGTCTTTAAGGTACTC-------------AGAATACAGATAACTATTTAATTTTTGTG-TTTTT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 50734 81 + 97742 CGCAGCAGAT--AAGATGGA--------------------------------------ATTGA----------------------------------------------------------------ATAG-TTTTTGTCTTTAAGGTACTC-------------AGAATACAGATAACTATGTAATTTTTGTG-GTTTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3701771 90 - 108555830 -GCACGAGACA-AAGATGGA--------------------------------------ATTGGC---------------------------------------------------------------ATAG-TTTTTGTCTTTAAGGTGCTCATAATAGAATATTAGAATATAGATAAC----TAATTTTTGTG--TTTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 50943 81 + 85016 CGCAGCAGAT--AAGATGGA--------------------------------------ATTGA----------------------------------------------------------------ATAG-TTTTTGTCTTTAAGGTACTC-------------AGAATACAGATAACTATGTAATTTTTGTG-TTTTT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1030257 86 - 1267912 CGCAGCAGAC--AAGATGGA--------------------------------------ATTGA----------------------------------------------------------------ATAG-TTTTTGTCTTTAATGTACTCATAAT--------AGAATACAGATAACTATTCAATTTTTGTG-TTTTT i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 18900 87 + 8899380 TGCAAAAGGCA-AAGATGAA--------------------------------------ATTGAC---------------------------------------------------------------ATAGCTTTTTGTCTTGAAGGTGTTCATAAC--------AAAATACAAATAAC--TTTAATTTTTGTA-TTTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4409904 89 + 4432243 TGCAATAGACA-AAGATGAA--------------------------------------ATTGAC---------------------------------------------------------------ATAGTTTTTTGTCTTTAAGGTGCTTATAAT--------AGAATACAGACAACTATTTAACTTTTGCA-TTTTT i cebCap1.NW_016107581v1 C 0 C 0 s aotNan1.NW_018507789v1 2503242 89 + 12154212 TTCAATAGACA-AAGATGAA--------------------------------------ATTGAC---------------------------------------------------------------ATAGTTTTTTGTCTTTAAGGTGCTTATAAT--------AGAATACAGAAAACTATTTAATTTTTGTG-TTTTT i aotNan1.NW_018507789v1 C 0 N 0 s dasNov3.JH570393 1691699 174 - 2296528 TGCAG-AGATACAAGGTAAAGTAATGCTTTTTTTTtttttttttaggaggtaccaaggattgaacctgggacctcgtacatacaaagcagccattcaaccactgagctacacccactcccGAAATAGATAG-TTTTAATTTTTAAGAAACTCAGAAT--------AGAAT------TGTTCTGTAGTTTT---------- i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79077015 1063 - 85426708 I e otoGar3.GL873538 19630652 20804 - 27850971 I e calJac3.chr18 46470284 8193 - 47448759 M e macNem1.NW_012020287v1 52160 89 + 4899514 I e nomLeu3.chr11 206883 1089 - 123690457 M a score=1577162.000000 s hg38.chr3_KI270784v1_alt 164049 299 + 184404 TAACCAGAATTTTTAAG-AAAAAA--TATTTTAATTCATTCATACATTTTTCCACTTAAAAAATAACTATCATGTGTCTTTAGTGGA--CTAAGCATTTT--TCCAATGTTACAAA----ATACATTTTAAAAATACAC----------TTAGGAGATTGTGAATACCATTGTCATTTATTTTATT-TACTACATTATGTAGTGCTTACTGTGTGTCCAATGTCATCTGGGAGCTTATTGTTATAATTTATTATGTA--TGCGTT--ATGTTCAGTATGTGCCAGGCACTTTTACATTTGTGGTGATGAATGCAAGCTTCTAAAA s panTro5.chr3 56933 298 - 202621043 -AACCAGAATTTTTAAG-AAAAAA--TATTTTAATTCATTCATACATTTTTCCAATTAAAAAATAACTATCATGTGTCTTTAGTGGA--CTAAGCATTTT--TCCAATGTTACAAA----ATACATTTTAAAAATACAC----------TTAGGAGATTGTGAATACCATTGTCATTTATTTTATT-TACTACCTTATGTAGTGCTTACTGTGTGTCCAATGTCATCTGGGAGCTTATTGTTATAATTTATTATGTA--TGCATT--ATGTTCAGTATGTGCCAGGCACTTTTACATTTGTGGTGATGAATGCAAGCTTCTAAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 51882 298 - 205426864 -AACCAGAATTTTTAAG-AAAAAA--TATTTTAATTCATTCATACATTTTTCCAATTAAAAAATAACTATCATGTGTCTTTAGTGGA--CTAAGCATTTT--TCCAATGTTACAAA----ATACATTTTAAAAATACAC----------TTAGGAGATTGTGAATACCATTGTCATTTATTTTATT-TACTACCTTATGTAGTGCTTACTGTGTGTCCAATGTCATCTGGGAGCTTATTGTTATAATTTATTATGTA--TGCATT--ATGTTCAGTATGTGCCAGGCACTTTTACATTTGTGGTGATGAATGCAAGCTTCTAAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 70370 298 + 508821 TAACCAGAATTTTTAAG-AAAAAA--TATTTTAATTCATTCATACATTTTTCCACTTAAAAAATAACTACCATGTGTCTTTAGTGGA--CTAAGCATTTT--TCCAATGTTACAAA----ATACATTTTAAAAATACAC----------TTAGGAGACTGTGAATACCATTGTCATTTATTTTATT-TACTACCTTATGT-GTGCTTACTGTGTGTCCAATGTCATCTGGGAGCTTATTGTTATAATTTATTATGTA--TGCGTT--ATGTTCAGTATGTGCCAGGCACTTTTACATTTGTGGTGATGAATGCAAGCTTCTAAAA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 35921 294 - 85730 TTACCAGAATTTTTAAG-AAAAAA--TATTTTAATTCATTCATACACTTTTCCACTTAAAAAATAACTATCATGTGTCTTTTGTGGA--CTAAGCATTTT--TCCAATGTTACAAA----ATCCATTTTAAAAATACAG----------TTAGGAGATTGTGAATACCATTGTCA-----TTTAGT-TACTACCTTATGTAGTGCTTACTGTGTGCCCAATGTCATCTGGGAGTTTATTGTTATAATTTATTATGTA--TGTATT--ATGTTCAGTATGTGCCAGGCACTTTTAGATTTGTGGTGATGAATGCAAGCTTCTAAAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 56069 294 - 181584905 TTACCAGAATTTTTAAG-AAAAAA--TATTTTAATTCATTCATACACTTTTCCACTTAAAAAATAACTATCATGTGTCTTTTGTGGA--CTAAGCATTTT--TCCAATGTTACAAA----ATCCATTTAAAAAATACAG----------TTAGGAGATTGTGAATACCATTGTCA-----TTTATT-TACTACCTTATGTAGTGCTTACTGTGTGCCCAATGTCATCTGGGAGTTTATTGTTATAATTTATTATGTA--TGTATT--ATGTTCAGTATGTGCCAGGCACTTTTAGATTTGTGGTGATGAATGCAAGCTTCTAAAA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 50815 293 + 97742 TTACCAGAATTTTTAAG-AAAAAA--TATTTTAATTCATTC-TACACTTTTCCACTTAAAAAATAACTATCATGTGTCTTTTGTGGA--CTAAGCATTTT--TCCAATGTTACAAA----ATCCATTTAAAAAATAGAG----------TTAGGAGATTGTGAATACCAATGTCA-----TTTATT-TACTACCTTATGTAGTGCTTACTGTGTGCCCAATGTCATCTGGGAGTTTATTGTTATAATTTATTATGTA--TGTATT--ATGTTCAGTATGTGCCAGGCACTTTTAGATTTGTGGTGATGAATGCAAGCTTCTAAAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3701861 293 - 108555830 TTAACAGAGTTTTTAAG--AAAAA--TATTTTAATTCATTCATATACTTGTCCACTTAAAAAATAACTATCATGTATCTTTTATAGA--CTAAGCATTTT--TCCAATGTTACAAA----ATACATTTAAAAAATACAG----------TTAGGAGATTGTTATTACCACTGTTA-----TTTATT-TACCACCTTAAATAGTGCTTACTATGTGTCCAGTGTCACCTGGGAGCTTATAGTTATTATTTATTACATA--TGTATC--ATGTTCAGTATGTTCCAGGCACATTTACATTTGTGGTAATGAATGCAAGCTTCTAAAA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 51024 294 + 85016 TTACCAGAATTTTTAAG-AAAAAA--TATTTTAATTCATTCATACACTTTTCCACTTAAAAAATAACTATCATGTGTCTTTTGTGGA--CTAAACATTTT--TCCAATGTTACAAA----ATCCATTTAAAAAATACAG----------TTAGGAGATTGTGAATACCAATGTCA-----TTTATT-TACTACCTTATGTAGTGCTTACTGTGTGCCCAATGTCATCTGGGAGTTTATTGTTATAATTTATTATGTA--TGTATT--ATGTTCAGTATGTGCCAGGCACTTTTAGATTTGTGGTGATGAATGCAAGCTTCTAAAA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1030343 294 - 1267912 TTACCAGAATTTTTAAGAAAAAAA--TATTTTAATT-ATTCATATACTTTTCCACTTAACAAATAACTATAATGTGTCTTTTGTGGA--CTAAGCATTTT--TCCAATGTTACAAA----ATCCATTTAAAAAATACAG----------TTAGGAGATTGTGAATACCATTGTCA-----TTTATT-TACTACCTTATATAGTGCTTACTGTGTGCCCAATGTCATCTGGGAGTTTATTGTTATAATTTATTATGTA--TGTATT--ATGTTCAGTATGTGCCAGGCACTTTTAGATTTGTGGTGACGAATGCAAACTTCTAAAA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 18987 302 + 8899380 TCTACTAAATTTTTAAG--AAAAA--TATGTTGATTTATTCATACACTTGTCCACTTAAAAAATAACTATCATGTGTATTTTATGGA--CTAAGAATTTTTCTCCAGCGTTACAAA----AGACATTTTAAAAATACGG----------TTAGGAGATTGTTGTTACCATTGTCATTTATTTTGTT-TGCTCCCTTATGTAGTGCTTACTATGTGTCCAACATCATCTGGGAGCTTATAGTTGTTATTCATTACGTACGTGTATC--ATGTTTAGTATGTGCCAGTCATTTTTACATTTGTGGCGATGAATGCAAGCTTCTAAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4409993 284 + 4432243 CCTACTGAATTTTTAAG--AAAAA--T------ATTCATTCATATACTTGTCCACTT----AATAACTATCATGTGTCTTTTATGGA--CTAAGCATTTT--TCCAATGTTACAAA----ATACATTTTAAAAATATGG----------TTAGGAGATTGTTGTTACCATTGTCATTTATTTTATT-TACTTTCTTATGTAGTGCTTACTCTGAACCTGATGTCATCTGGGAGCTTATAGTTA----TCATTATGTA--TGTATT--ATGTTCAATATGTGCCAGGCATTTTTACATTTGTAGTGATGAATGCAAGCTTCTAAAA i cebCap1.NW_016107581v1 C 0 C 0 s dasNov3.JH570393 1691873 311 - 2296528 TCCACAGTATTTTCCAA-AAATAACCTACTTTTATTCATTGATTCCCTTGTTCACTTATATAATTA-TACAATGTCTTTCTTTTAGGTTCTAAGCATTAT--TCTAATGTTGCAGATTACAAACATTTTAAAAACATAAGCACTGCTCTCCAATTGCTTGTTATTACTGTTATT------TTTATTATAATACTTCATTCAGGGCTTACTATATGGCAGATGCCCTTCAGGAGCATATAATTATCATATATCAATTA--TATATTTGGTGTTTGATGTATGGCAGACA--TTTAAGTCTATGGTGAGGAATTAGAACTTTTAAAA i dasNov3.JH570393 C 0 I 117 e canFam3.chr2 79077015 1063 - 85426708 I e otoGar3.GL873538 19630652 20804 - 27850971 I e calJac3.chr18 46470284 8193 - 47448759 M e macNem1.NW_012020287v1 52160 89 + 4899514 I e nomLeu3.chr11 206883 1089 - 123690457 M a score=1181720.000000 s hg38.chr3_KI270784v1_alt 164348 230 + 184404 TCTGGGTCAGATTTAGGGTAAGCATGCAGAGTGAGTGGAACTTTGCCA------ATAAGGAGGCAGAGGGATGATGCTTGGCAGAAGGAATATCTAACAAG-TTGCATGTTTGACAGAAGCAGCAGCCATGAAGAACGAAAG-TTTT-AGAAAAGGAGGAGCAATTTCAAAATGTAAGACACCTGAGTGAGCTTTGTAGCGTTTGTGAGCAGTTCAAATTTACTAGTGCAAAAAAAG-TG s panTro5.chr3 57231 230 - 202621043 TCTGGGTCAGATTTAGGGTAAGCATGCAGAGTGAGTGGAACTTTGCCA------ATAAGGAGGCAGAGGGATGATGCTTGGCAGAAGGAATATCTAACAAG-TTGCATGTTTGACAGAAGCAGCAGCCACGAAGAACGAAAG-TTTT-AGAAAAGGAGGAGCAATTTCAAAATGTAAGACACCTGAGTGAGCTTTGTAGCGTTTGTGAGCAGTTCAAATTTACTAGTGCAAAAAAAG-TG i panTro5.chr3 C 0 C 0 s panPan2.chr3 52180 230 - 205426864 TCTGGGTCAGATTTAGGGTAAGCATGCAGAGTGAGTGGAACTTTGCCA------ATAAGGAGGCAGAGGGATGATGCTTGGCAGAAGGAATATCTAACAAG-TTGCATGTTTGACAGAAGCAGCAGCCACGAAGAACGAAAG-TTTT-AGAAAAGGAGGAGCAATTTCAAAATGTAAGACACCTGAGTGAGCTTTGTAGCGTTTGTGAGCAGTTCAAATTTACTAGTGCAAAAAAAG-TG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 70668 229 + 508821 TCTGGGTCAGATTTAGGGTAAGCATGCAGAGTGAGTGGAACTTTGCCA------A-AAGGAGGCAGAGGGATGATGCTTGGCAGAAGGAATATCTAACAAG-TTGCATGTTTGACAGAAGCAGCAGCCACGAAGAACGAAAG-TTTT-AGAAAAGGAGGAGCAATTTAAAAATGTATGACACCTGAGTGAGCTTTGTAGCATTTGTGAGCAGTTCAAATTTACTAGTGCAAAAAAAG-TG i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 36215 232 - 85730 TCTGGGTCGAATTTAGGGTAAGCATGCAGAGTGAGTGGAACTTTGCCA------ATAAGGAGGCAGAGGGATGATGCTTGGCAGAAGGAATATCTAACAAG-TTGCATGTTTGACAGAAGCAGCAGCCATGAAGAATGAAAGTTTTT-AAAAAAGGAGGAGCAATTTTAAAACGTAGGATACCTGAGTGAACTTTGTAGAGTTTATGAGCAGTTCAAATTTACTAGTGCAAAAAAAATTA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 56363 232 - 181584905 TCTGGGTCGAATTTAGGGTAAGCATGCAGAGTGAGTGGAACTTTGCCA------ATAAGGAGGCAGAGGGATGATGCTTGGCAGAAGGAATATCTAACAAG-TTGCATGTTTGACAGAAGCAGCAGCCATGAAGAATGAAAGTTTTT-AAAAAAGGAGGAGCAATTTTAAAACGTAGGATACCTGAGTGAACTTTGTAGAGTTTATGAGCAGTTCAAATTTACTAGTGCAAAAAAAATTA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 51108 232 + 97742 TCTGGGTCAAATTTAGGGTAAGCATGCAGAGTGAGTGGAACTTTGCCA------ATAAGGAGGCAGAGGGATGATGCTTGGCAGAAGGAATATCTAACAAG-TTGCATGTTTGACAGAAGCAGCAGCCATGAAGAATGAAAGTTTTT-AAAAAAGGAGGAGCAATTTTAAAACGTGGGATACCTAAGTGAACTTTGTAGAGTTTACGAGCAGTTCAAATTTACTAGTGCAAAAAAAATTA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3702154 231 - 108555830 TGT-GGTAGGATTTAGGGTAAGCGTGCAGAGTGGGTGGAACTTTGCCAG-----GTAAGGAGGCAGAGGGATGATGCTTGGCAGAAGGAGTATCTAACAAGCTTGCATGTTTGACAGAAGCAGCACCTGCGAGGAATGAAAG-TTTT-AAAACACGACGAGCAAGTTCAAAAGATAGGACACCTGAGTGAACTTTGTAGAGTTTATGAGCAGTTCAAATTTACTAGTGCAAAAAAAA-AA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 51318 232 + 85016 TCTGGGTCAAATTTAGGGTAAGCATGCAGAGTGAGTGGAACTTTGCCA------ATAAGGAGGCAGAGGGATGATGCTTGGCAGAAGGAATATCTAACAAG-TTGCATGTTTGACAGAAGCAGCAGCCATGAAGAATGAAAGTTTTT-AAAAAAGGAGGAGCAATTTTAAAACGTGGGATACCTGAGTGAACTTTGTAGAGTTTATGAGCAGTTCAAATTTACTAGTGCAAAAAAAATTA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1030637 232 - 1267912 TCTGGCTTGAATTTAGGGTAAGCATGCAGAGTGAGTGGAACTTTGCCA------ATAAGGAGGCAGAGGGATGATGCTTGGCAGAAGGAATATCTAACAAG-TTGCATGTTTGACAGAAGAAGCAGCCATGAAGAATGAAAGTTTTA-AAAAAAGGAGGAGCAATTTTAAAACGTAGGACACCTGAGTGAATTTTGTAGAGTTTATGAGCAGTTTAAATTTAGTAGTGCAAAAAAAATTA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 19289 232 + 8899380 TGTGGGTAGGATTTAGGGTAAGCATGTATAGTGAGTAGAACTTTTCCAG-----GTAGGGAGGCAGTAGGATGACTCTTGGCAGAAGGAATATCTAACAAGCTTGCATGTTTGACAGAAGCAGCAGCCATGAAGAATGAAAG-TTTT-AAAAGAGGAGCAGCAAGTTCAAAAGGTAGGACACCTGAGTGAACTTTGTAGAGTTTATAAGCAGTTGAAATTTACTAGTACAAAAAAAG-TA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4410277 237 + 4432243 TGTGGGTAGAATTTAGAGTGAGCATGCAGAGTGAGTGGAACTTTGCCAGTGAGTGGAAGGAGGCAGAGGGATGATGCTTGGCAGAAGAAATATCTAACAAGCTTACATATTTGACAGACGCAGCAGCCATGAAG-ATGAAAG-TTTTAAAAAGAGGAGGAGCAAGTTCGAAAGGTAGGACACCTGAGTGAACTTTATAGAGTTTATCAGCAGTTCAGATTTACTAGTGTAAAAAATG-TA i cebCap1.NW_016107581v1 C 0 C 0 e canFam3.chr2 79077015 1063 - 85426708 I e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e calJac3.chr18 46470284 8193 - 47448759 M e macNem1.NW_012020287v1 52160 89 + 4899514 I e nomLeu3.chr11 206883 1089 - 123690457 M a score=974435.000000 s hg38.chr3_KI270784v1_alt 164578 168 + 184404 TATAGGAGTGGTTGGCAATGAGGTGGAAATAGTTTACAGTTATTATTTATTATG-----------TTCAGTATGTGCCAGTGAAGGCAAGCTTAGCAAAGACTttgttgttgttgttgttTGACCTG-TGTCTAGAAACAAGTTTAATAAAA-GACTTTTAATAGTATAGAAATGAGTAGA s panTro5.chr3 57461 168 - 202621043 TATAGGAGTGGTTGGTAATGAGGTGGAAATAGCTTATAGTTATTATGTATTATG-----------TTCAGTATGTGCCAGTGAAGGCAAGCTTAGCAAAGACTttgttgttgttgttgttTGACCTG-TGTCTAGAAACAAGTTTAATAAAA-GACTTTTAATAGTATAGAAATGAGTAGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 52410 168 - 205426864 TATAGGAGTGGTTGGTAATGAGGTGGAAATAGCTTATAGTTATTATGTATTATG-----------TTCAGTATGTGCCAGTGAAGGCAAGCTTAGCAAAGACTttgttgttgttgttgttTGACCTG-TGTCTAGAAACAAGTTTAATAAAA-GACTTTTAATAGTATAGAAATGAGTAGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 70897 165 + 508821 TATAGGAGTGGTTGGTAATGAGGTGGAAATAGCTTATAGTTATTATTTATTATG-----------TTCAGTATGTGCCAGTGAAGGCAAGCTTAGCAAAGACT---TTGTTGTTGTTGTTTGACCTG-TGTCTAGAAACAAGTTTAATAAAA-GACTTTTAATAGTATAGAGATGAGTAGA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 36447 175 - 85730 TATGGGAGTGGTTGGTAATGAGGTAAAAATAGCTTATAGTTATTATTTATTATG----TATTACGTGCAGCATGTGCCGGTGAAGGCAAGCTTAGCAAAGATTttgttgttgttgttgttTTACCTG-TGTCTAGAAACAAGTTCAATAAAA-GACTTTTAATAGTATAGAAATGAGTAGA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 56595 175 - 181584905 TATGGGAGTGGTTGGTAATGAGGTGAAAATAGCTTATAGTTATTATTTATTATG----TATTATGTGCAGCATGTGCCGGTGAAGGCAAGCTTAGCAAAGATTttgttgttgttgttgttTTACCTG-TGTCTAGAAATAAGTTCAATAAAA-GACTTCTAATAGTATAGAAATGAGTAGA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 51340 179 + 97742 TATGGGAGTGGTTGGTAATGAGGTGAAAATAGCTTATAGTTATTATTTATTATGTATTTATTATGTGCAGCATGTGCCGGTGAAGGCAAGCTTAGCAAAGATTttgttgttgttgttgttTTACCTG-TGTCTAGAAACAAGTTCAATGAAA-GACTTTTAATAGTATAGAAATGAGTAGA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3702385 172 - 108555830 TAT-GGAGAGCTTGTTAATGAGGCGAAAATAACTTATAGTTATTATTTATTATGTGTTTATTATGTTTAGTATGTGTCAGTGAAGGCAACCTTAGGAAAGACT------TTGTTGTTGTTTTACCTG-TGTCTAGAAACAAGTCCAGTAAAA-GACTTTTAATAGTATAGAACTGAGTAGA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 51550 179 + 85016 TATGGGAGTGGTTGGTAATGAGGTGAAAATAGCTTATAGTTATTATTTATTATGTATTTATTATGTGCAGCATGTGCCGGTGAAGGCAAGCTTAGCAAAGATTttgttgttgttgttgttTTACCTG-TGTCTAGAAACAAGTTCAATGAAA-GACTTTTAATAGTATAGAAATGAGTAGA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1030869 179 - 1267912 TATGGGAGTGGTTGGTAATGAGGTGAAAATAGCTTATAGTTATTATTTATTATGTATTTATTACGTTCAGTATGTGCCGGGGAAGGCAAGCTTAGCAAAGATTttgttgttgttgttgttTTACCTG-TGTCTAGAAACAAGTTCAATAAAA-GACTTTTAATTGTATAGAAATGAGTAGA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46478484 172 - 47448759 TATGGGTGTGGTTGGGAACGGG--TAAACTAACTTATAGttattatttattatatatttattatGTTCATTATGTGCCAGTGAAGGCAAGCTTAGGAAAGACT---TTGT---TGTTGTTTTACCTGTTGTTTAGAAACAAGTTCAATAAAAGGCTTTTTAAT-GTATAGAAATGAGTAGA i calJac3.chr18 M 8193 C 0 s saiBol1.JH378197 19521 177 + 8899380 TATGGAAGTGGTTGGGAATGGGATGAAAATAGCTTATAGCTATTATTTATTATGTATTTATGATGTTCAGTATGTGTCAGTAAAGGCAAGCTTAGGAAATACT---TTGTTGCTGTTGTTTTACCTG-TGTCTTTAAATAAGTTTAATAAAAAGACTTTTAATAGTATATAAATGAGTAGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4410514 176 + 4432243 TATGGGAGTGATTGGGAATTGGGCAAAAATAGCTtttagttattatttattatgtatttattATGTTCAGTATGTGCCAGTGAAGGCAAGCTTAGGAAAGACT---TTGTTGTTGTTGTTTTACCTG-TGTCTAGAAACAAGTTCAATAAAAGGCTTTTTAAT-GTATAGAAATGAGTAGA i cebCap1.NW_016107581v1 C 0 C 0 e canFam3.chr2 79077015 1063 - 85426708 I e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e macNem1.NW_012020287v1 52160 89 + 4899514 I e nomLeu3.chr11 206883 1089 - 123690457 M a score=350524.000000 s hg38.chr3_KI270784v1_alt 164746 45 + 184404 TCTTATCCTGTAGGCCAGGGGAAACTTCTCAGGTAGAATGCTTTT s panTro5.chr3 57629 45 - 202621043 TCTTATCCTGTAGGCCAGGGGAAACTTCtcaggtagaatgctttt i panTro5.chr3 C 0 C 0 s panPan2.chr3 52578 45 - 205426864 TCTTATCCTGTAGGCCAGGGGAAACTTCtcaggtagaatgctttt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 71062 45 + 508821 TCTTATCCTGTAGGCCAGGGGAAACTTCtcaggtagaatgctttt i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 207972 44 - 123690457 TCATAGCCTGTAGGCCAGGGG-AACTTCtcaggtagaatgctttt i nomLeu3.chr11 M 1089 C 0 s rheMac8.chrUn_NW_014858614v1 36622 45 - 85730 TCTTATCCTGTAGGCCAGGGGAAACTTCTTGGGtagaatgctttt i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 56770 45 - 181584905 TCTTATCCTGTAGGCCAGGGGAAACTTCTTGGGtagaatgctttt i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 51519 45 + 97742 TCTTATCCTGTAGGCCAGGGGAAACTTCtcgggtagaatgctttt i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3702557 45 - 108555830 TCTTATCCTGCAGGCCAGGGGAAACTTCTGAGGTAGAGTGCTTTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 51729 45 + 85016 TCTTATCCTGTAGGCCAGGGGAAACTTCtcgggtagaatgctttt i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1031048 45 - 1267912 TCTTATCCTGTAGGCCAGGGGAAACTTCTTGGGTAGAATGCTTTT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46478656 45 - 47448759 TCTTATCCTGTAGGCCAGGGGAAACTTCTTGGGTAGAATGCTTTT i calJac3.chr18 C 0 I 49 s saiBol1.JH378197 19698 45 + 8899380 TCTTACCCTGTAGGCTAGGAGAAACTTCtcaggtagaatgctttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4410690 45 + 4432243 TCTTATCCTGTAGGCCAAGAGAAACTTCtcagatagaatgctttt i cebCap1.NW_016107581v1 C 0 C 0 e canFam3.chr2 79077015 1063 - 85426708 I e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e macNem1.NW_012020287v1 52160 89 + 4899514 I a score=85116.000000 s hg38.chr3_KI270784v1_alt 164791 12 + 184404 GGCTGTAAATAC s panTro5.chr3 57674 12 - 202621043 ggctgcaaatac i panTro5.chr3 C 0 C 0 s panPan2.chr3 52623 12 - 205426864 ggctgcaaatac i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 71107 12 + 508821 ggctgcaaatac i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 208016 12 - 123690457 ggctgcaaatac i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 36667 12 - 85730 ggctgcaaatac i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 56815 12 - 181584905 ggctgcaaatac i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 51564 12 + 97742 ggctgcaaatac i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3702602 12 - 108555830 GGCTGCAAATAC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 51774 12 + 85016 ggctgcaaatac i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1031093 12 - 1267912 GCCTGCAAATAC i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 19743 12 + 8899380 ggctgcaaatac i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4410735 12 + 4432243 ggctgcaaatac i cebCap1.NW_016107581v1 C 0 C 0 e canFam3.chr2 79077015 1063 - 85426708 I e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e calJac3.chr18 46478701 49 - 47448759 I e macNem1.NW_012020287v1 52160 89 + 4899514 I a score=68306.000000 s hg38.chr3_KI270784v1_alt 164803 11 + 184404 TAG-AAGACCTA s panTro5.chr3 57686 11 - 202621043 tag-aagaccta i panTro5.chr3 C 0 C 0 s panPan2.chr3 52635 11 - 205426864 tag-aagaccta i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 71119 11 + 508821 tag-aagaccta i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 208028 11 - 123690457 tag-aagaccta i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 36679 11 - 85730 tag-aagaccta i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 56827 11 - 181584905 tag-aagaccta i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 51576 11 + 97742 tag-aagaccta i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3702614 8 - 108555830 TAC-AAGAC--- i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 51786 11 + 85016 tag-aagaccta i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1031105 11 - 1267912 TAG-AAGACCTA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 19755 12 + 8899380 tagaaagaccta i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4410747 11 + 4432243 tag-aagaccta i cebCap1.NW_016107581v1 C 0 I 40 s canFam3.chr2 79078078 11 - 85426708 taa-aaaaaCCA i canFam3.chr2 I 1063 C 0 e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e calJac3.chr18 46478701 49 - 47448759 I e macNem1.NW_012020287v1 52160 89 + 4899514 I a score=690563.000000 s hg38.chr3_KI270784v1_alt 164814 120 + 184404 ACTAACCGTGGCCAAAACCATAAGAACCAGACTTGTTTTGATTGTCCAGTGATATAATTGG-GTCCCACTTGTTCCTCTTTCAGCTACAATGTTGGCAGTATCTTGTTCATTTCCCCTTTC s panTro5.chr3 57697 120 - 202621043 actaaccgtggccaaaaccgtaagaaCCAGACTTGTTTTGATTGTCCAGTGATATAATTGG-GTCCCACTTGTTCCTCTTTCAGCTACAATGTTGGCAGTATCTTGTTCATTTCCCCTTTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 52646 120 - 205426864 actaaccgtggccaaaaccgtaagaaCCAGACTTGTTTTGATTGTCCAGTGATATAATTGG-GTCCCACTTGTTCCTCTTTCAGCTACAATGTTGGCAGTATCTTGTTCATTTCCCCTTTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 71130 120 + 508821 actaaccgtggccaaaaccataagaaCCAGACTTCTTTTGATTGTCCAGTGATATAATTGG-GTCCCACTTGTTCCTCTTTCAGCTACAATGTTGGCAGTATCTTGTTCATTTCCCCTTTC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 208039 120 - 123690457 actaaccgtggccaaaaccgtaagaaCCAGGCTTGTTTTGGTTGTCCAGTGATATGATTGG-ATCCCACTTGTTTCTCTTTCAGCTACAATGTTGGCAGTATCTTGTTCATTTCTCCTTTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 36690 120 - 85730 gctaacagtggccaaaaccataagaaCCAGACTTCGTTTGGTTGTCCAGTGATATAATTGG-ATCCCACTTGTTCCTCTTTCAGCTATGATGTTGGCAGTATCTTGTTCATTTCTCCTTTC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 56838 120 - 181584905 gctaacagtggccaaaaccataagaaCCAGACTTCGTTTGGTTGTCCAGTGATATAATTGG-ATCCCACTTGTTCCTCTTTCAGCTATGATGTTGGCAGTATCTTGTTCATTTCTCCTTTC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 51587 120 + 97742 gctaacagtggccaaaaccataagaaCCAGACTTCGTTTGGTTGTCCAGTGATATAATTGG-ATCCCACTTGTTCCTCTTTCAGCTATGATGTTGGCAGTATCTTGTTCATttctcctttc i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3702622 119 - 108555830 -CTAACAGTGACCAAAACCATAAGAACCAGGCTTGTTTTGGTTGTCTGGTGATATTATTGG-ATCCCACTTGttcctctttcagctatgctgttgacagtgtcttgttcatgtctcttttc i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 51797 120 + 85016 gctaacagtggccaaaaccataagaaCCAGACTTTGTTTGGTTGTCCAGTGATATAATTGG-ATCCCACTTGTTCCTCTTTCAGCTATGATGTTGGCAGTATCTTGTTCATTTCTCCTTTC i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1031116 120 - 1267912 GCTAACAGTGGCCAAAACCATAAGAACCAGACTTTGTTTGGTTGTCCAGTGATACAACTGG-ATCCCACTTGttcctctttcagctatgatgttggcagtatcttgttcatttctcctttc i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 19767 116 + 8899380 actgacagtggccaaaaccataaAAACCAGACTTGTT----TGGTCCCTTGATAATACTGG-ATCCCACTTGTTCCTCTTTCATTTATGATGTTGGCAGTGTCTTGTTCATGTCtcctttc i saiBol1.JH378197 C 0 C 0 s canFam3.chr2 79078089 113 - 85426708 ---AATAGGCACTAAAACAATAGGGACCAGAATTGTTTTGATGGTTCAGTGATGTCATCAGTATTCCAGTTGTATCCTTTTCAGCTTTCG-GTTGGCAGTAttttttc----tctcctttc i canFam3.chr2 C 0 I 25896 e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e cebCap1.NW_016107581v1 4410758 40 + 4432243 I e calJac3.chr18 46478701 49 - 47448759 I e macNem1.NW_012020287v1 52160 89 + 4899514 I a score=586189.000000 s hg38.chr3_KI270784v1_alt 164934 106 + 184404 ATGGTTGGCTACTTAGCAACAGCTCCAAACATCGTGTTCTCAC---------------------AAGGGCTGCTTTTCTTCACATGTGTCTATTAAATTGGGAGAAAACCCAGAAGTATGCAGGGGA s panTro5.chr3 57817 105 - 202621043 ATGGTTGGCTACTTAGCAACAGCTCCAAACATCATGTTCTCAC---------------------AAGGGCTGCTTTTCTTCACATGTGTC-ATTAAATTGGGAGAAAACCCAGAAGTATGCAGGGGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 52766 106 - 205426864 ATGGTTGGCTACTTAGCAACAGCTCCAAACATCATGTTCTCAC---------------------AAGGGCTGCTTTTCTTCACATGTGTCTATTAAATTGGGAGAAAACCCAGAAGTATGCAGGGGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 71250 106 + 508821 ACGGTTGGCTACTTAGCAACAGCTCCAAACATCATGTTCTCAC---------------------AAGGGCTGCTTTTCTTCACATGTGTCTGTTAAATTGGGAGAAAACCCAGAAGTATGCAGGGGA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 208159 102 - 123690457 ATGGTTGGCTACTTAGCAACAGCCCCAAACA---TGTTCTCAC---------------------AAGGGCTGCTTTTCTTCACATGTGTCTATTAAATTGGGAGAAAACCCAGAA-TATGCAGGGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 36810 126 - 85730 ATGGTTGGCTACTTAGCAACAGCTCCAAACATGATGTTCTCACAAGATAGTATCTAAA-GCTGGAAGGGCTGCTTTTTTTCACATGTGTCTATTAAATTGGGAGAAAACTCAGAAGTATGCAGGGGA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 56958 126 - 181584905 ATGGTTGGCTACTTAGCAACAGCTCCAAACATGATGTTCTCACAAGATAGTATCTAAA-GCTGGAAGGGCTGCTTTTTTTCACATGTGTCTATTAAATTGGGAGAAAACTCAGAAGTATGCAGGGGA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 51707 126 + 97742 atggttggctacttagcaacagctccaaacatcacgttctcacaagatagtatctaaa-gctggaagggctgcttttcttcacatgtgtctattaaattgggagaaaactcagaagtatgcagggga i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3702741 127 - 108555830 atggttggctacttagcaacagctccaaacatcatgttctcacaagacagtatctaaaggctggaagggctgcttttcttcacgtgtgtcttttaaattgggaaaaaactcagaggcttgcagggga i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 51917 126 + 85016 ATGGTTGGCTACTTAGCAACAGCTCCAAACATCACGTTCTCACAAGATAGTATCTAAA-GCTGGAAGGGCTGCTTTTCTTCACATGTGTCTATTAAATTGGGAGAAAACTCAGAAGTATGCAGGGGA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1031236 127 - 1267912 atggttggctacttagcaacagctccaaacatcatgttctcacaagacagtatctaaaggctggaagggctgcttttcttcacatgtgtctattaaattgggagaaaactcagaagtatgcagggga i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 19883 127 + 8899380 atggttgactacttagcagcagctccaaccatcatgttctcacaaggcagtatctaagggctggaagggctggttttcttcatatgtgtcttttaaattgagagcaaactcagaagcatgcaggggg i saiBol1.JH378197 C 0 C 0 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e cebCap1.NW_016107581v1 4410758 40 + 4432243 I e calJac3.chr18 46478701 49 - 47448759 I e macNem1.NW_012020287v1 52160 89 + 4899514 I a score=21220.000000 s hg38.chr3_KI270784v1_alt 165040 5 + 184404 C-TTTT s panTro5.chr3 57922 5 - 202621043 C-TTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 52872 6 - 205426864 CTTTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 71356 5 + 508821 C-TTTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 208261 5 - 123690457 C-TTTT i nomLeu3.chr11 C 0 I 305 s rheMac8.chrUn_NW_014858614v1 36936 5 - 85730 C-TTTT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 57084 5 - 181584905 C-TTTT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 51833 5 + 97742 c-tttt i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3702868 5 - 108555830 c-tttt i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 52043 5 + 85016 C-tttt i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1031363 5 - 1267912 c-tttt i colAng1.NW_012116822v1 C 0 C 0 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e cebCap1.NW_016107581v1 4410758 40 + 4432243 I e calJac3.chr18 46478701 49 - 47448759 I e saiBol1.JH378197 20010 0 + 8899380 C e macNem1.NW_012020287v1 52160 89 + 4899514 I a score=82616.000000 s hg38.chr3_KI270784v1_alt 165045 25 + 184404 TGTAA-tttttttttttttttttttt s panTro5.chr3 57927 25 - 202621043 TGTAA-tttttttttttttttttttt i panTro5.chr3 C 0 C 0 s panPan2.chr3 52878 25 - 205426864 TGTAA-tttttttttttttttttttt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 71361 21 + 508821 TGTAA-tttttttttttttttt---- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 208571 25 - 123690457 TGTAA-tttttttttttttttttttt i nomLeu3.chr11 I 305 C 0 s rheMac8.chrUn_NW_014858614v1 36941 26 - 85730 TGTAAttttttttttaaatttttttt i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 57089 25 - 181584905 TGTAA-TGTTTTTAAAAAtttttttt i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 51838 18 + 97742 tgtaa-ttttt-------tttttttt i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3702873 25 - 108555830 tgtag-tttttttttttttttttttt i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 52048 25 + 85016 tgtaa-tttttttttttttttttttt i manLeu1.NW_012101680v1 C 0 I 509 s colAng1.NW_012116822v1 1031368 25 - 1267912 tgtaa-tttttttttttttttttttt i colAng1.NW_012116822v1 C 0 C 0 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e cebCap1.NW_016107581v1 4410758 40 + 4432243 I e calJac3.chr18 46478701 49 - 47448759 I e saiBol1.JH378197 20010 0 + 8899380 C e macNem1.NW_012020287v1 52160 89 + 4899514 I a score=513773.000000 s hg38.chr3_KI270784v1_alt 165070 159 + 184404 tttttttttttttt--ggagacagagtctcgctctgtcaccaggctggagtgcaatggcatgatcttggcccactgcaccctccacctccgaggttcaagcgattctcctggctcaacctcccaagtagctgggactacaggtgcgtgccaccacacccag s panTro5.chr3 57952 161 - 202621043 ttttttttttttttttggagacagagtctcactctgtcaccaggctggagtgcaatggcatgatcttggcccaccgcaccctccacctcccaggttcaagcgattctcctggctcaacctcccaagtagctgggactacaggtgcgcgccaccacacccag i panTro5.chr3 C 0 C 0 s panPan2.chr3 52903 148 - 205426864 ttt-------------ggagacagagtctcactctgtcaccaggctggagtgcaatggcatgatcttggcccactgcaccctccacctcccaggttcaagcgattctcctggctcaacctcccaagtagctgggactacaggtgcgtgccaccacacccag i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 71382 144 + 508821 ----------------ggagacagagtctcgctctgtcaccaggctggagtgcaatggcatgatcttggcccactgcaccctccacctccctggttcaagcgattctcctggctcaacct-ccaagtagctgggactacaggtgcgtgccaccacacccag i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 208596 149 - 123690457 tttt------------tgagatggagtctcgctctgtcaccaggctggagtgcaatggcatgatcttggcccactgcaacctccacctcccacgttcaagcgattctcctggctcaacctcccacctacctgggactacaggtgcccgccaccacacccag i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 36967 153 - 85730 ------attttttt--tgagacagagtcttgctctctcaccaggctggagtgcagtggcatgatcttggcccactgcaccctccacctcccaggttcaagcgattctcctgcctcaacctcccaagtagctgggactacaggcgcctgccaccacacccag i rheMac8.chrUn_NW_014858614v1 C 0 I 325 s macFas5.chr6 57114 153 - 181584905 ------attttttt--tgagacagagtcttgctctctcaccaggctggagtgcagtggcatgatcttggcccactgcaccctccacctcccaggttcaagcgattctcctgcctcaacctcccaagtagctgggactacaggcgcctgccaccacacccag i macFas5.chr6 C 0 C 0 s cerAty1.NW_012005170v1 51856 153 + 97742 ------tttttttc--tgagacagagtcttgctctctcaccaggctggagtgcagtggcatgatcttggcccactgcaccctccacctcccgggttcaagcaattctcctgcctcagcctcccaagtagctgggactacaggcgcctgccaccacacccag i cerAty1.NW_012005170v1 C 0 I 318 s chlSab2.chr12 3702898 150 - 108555830 ------tttttggc--ggggatgtaggctctctctgtcgccagtctggagtccagtggcacgatctcggctcactgcagcctccacctcccaaggtcaagcaatt---ctgcctcagcctcccgaggagctgggacaacaggcatgtgcgaccacgcccag i chlSab2.chr12 C 0 I 1 s colAng1.NW_012116822v1 1031393 146 - 1267912 -------------t--tgagacagagtcttgctctctcaccaggctggagtgcagtggcatgatcttggcccactgcaccctccacctcccaggttcaagcgattctcctgcctcaacctcccaagtagctgggactacaggcacctgccaccacacccag i colAng1.NW_012116822v1 C 0 C 0 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e cebCap1.NW_016107581v1 4410758 40 + 4432243 I e calJac3.chr18 46478701 49 - 47448759 I e saiBol1.JH378197 20010 0 + 8899380 C e manLeu1.NW_012101680v1 52073 509 + 85016 I e macNem1.NW_012020287v1 52160 89 + 4899514 I a score=4500.000000 s hg38.chr3_KI270784v1_alt 165229 1 + 184404 c s panTro5.chr3 58113 1 - 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chr3 53051 1 - 205426864 c i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 71526 1 + 508821 c i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 208745 1 - 123690457 c i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 37445 1 - 85730 c i rheMac8.chrUn_NW_014858614v1 I 325 C 0 s macFas5.chr6 57267 1 - 181584905 c i macFas5.chr6 C 0 I 325 s macNem1.NW_012020287v1 52249 1 + 4899514 c i macNem1.NW_012020287v1 I 89 C 0 s cerAty1.NW_012005170v1 52327 1 + 97742 c i cerAty1.NW_012005170v1 I 318 C 0 s colAng1.NW_012116822v1 1031539 1 - 1267912 c i colAng1.NW_012116822v1 C 0 C 0 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e cebCap1.NW_016107581v1 4410758 40 + 4432243 I e calJac3.chr18 46478701 49 - 47448759 I e saiBol1.JH378197 20010 0 + 8899380 C e manLeu1.NW_012101680v1 52073 509 + 85016 I e chlSab2.chr12 3703048 1 - 108555830 I a score=10010.000000 s hg38.chr3_KI270784v1_alt 165230 2 + 184404 ta s panTro5.chr3 58114 2 - 202621043 ta i panTro5.chr3 C 0 C 0 s panPan2.chr3 53052 2 - 205426864 ta i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 71527 2 + 508821 ta i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 208746 2 - 123690457 ta i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 37446 2 - 85730 ta i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 57593 2 - 181584905 ta i macFas5.chr6 I 325 C 0 s macNem1.NW_012020287v1 52250 2 + 4899514 ta i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 52328 2 + 97742 ta i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3703049 2 - 108555830 ta i chlSab2.chr12 I 1 C 0 s colAng1.NW_012116822v1 1031540 2 - 1267912 ta i colAng1.NW_012116822v1 C 0 C 0 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e cebCap1.NW_016107581v1 4410758 40 + 4432243 I e calJac3.chr18 46478701 49 - 47448759 I e saiBol1.JH378197 20010 0 + 8899380 C e manLeu1.NW_012101680v1 52073 509 + 85016 I a score=721395.000000 s hg38.chr3_KI270784v1_alt 165232 132 + 184404 atttttgtatttttagtagagatggggtttcaccatgttgaccaggatggtcttgagctcttgatgttgtgatctgcccacctcagcctcccaaagtgctgggattacaggcatgagccaccgtgcctggcc s panTro5.chr3 58116 132 - 202621043 atttttgtatttttagtagagatggggtttcaccatgttgaccaggatggtcttgagctcttgatgttgtgatctgcccacctcagcctcccaaagtgctgggattacaggcatgagccaccgtgcctggcc i panTro5.chr3 C 0 C 0 s panPan2.chr3 53054 132 - 205426864 atttttgtatttttagtagagatggggtttcaccatgttgaccaggatggtcttgagctcttgatgttgtgatctgcccacctcagcctcccaaagtgctgggattacaggcatgagccactgtgcctggcc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 71529 132 + 508821 atttttgtatttttagtagagatggggtttcaccatgttgaccaggatggtcttgagctcttgatgttgtgatctgcccacctcagcctcccaaagtgctgggattacaggcatgagccaccgtgcctggcc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 208748 132 - 123690457 atttttgtatttttagtagagacggggtttcaccacgttgaccaggatggtcttgagctcttgatgttgtgatctgcccacctctgcctcccaaagtgctgggattacagttatgagccaccgtgcctggcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 37448 132 - 85730 atttttgtattcttaatagagacagggtttcaccatgttggccaggatggtcttgatctcttgaagtcatgatctgcccaccttggcctcccaaagtgctgggattacaggcataagccaccatgcccggcT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 57595 132 - 181584905 atttttgtattcttaatagagacagggtttcaccatgttggccaggatggtcttgatctcttgaagtcatgatctgcccaccttggcctcccaaagtgctgggattacaggcataagccaccatgcccggcc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 52252 132 + 4899514 atttttgtattcttaatagagacagagtttcaccatgttggccaggatggtcttgatctcttgaagtcatgatctgcccaccttggcctcccaaagtgctgggattacaggcataagccaccatgcccggcc i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 52330 132 + 97742 atttttgtattcttaatagaaacagggtttcaccatgttggccaggatggtcttgatctcttgaagtcatgatctgcccaccttggcctcccaaagtgctgggattacaggcatgagccaccatgcccggcc i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3703051 132 - 108555830 atttttctatgtttagtagagacggggtttcaccatgttggccatgatggtctcggtctcttgaccttgtgatccgcctgcctcggccacccaaagtgctggggttacaggcataagccaccgtgctcagcc i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 52582 132 + 85016 Atttttgtattcttaatagaaacagggtttcaccatgttggccaggatggtcttgatctcttgaagtcatgatctgcccaccttggcctcccaaagtgctgggattacaggcatgagccaccatgcccggcc i manLeu1.NW_012101680v1 I 509 C 0 s colAng1.NW_012116822v1 1031542 131 - 1267912 -attttgtattcttaacagagatggggtttcaccatgttggccaggatggtcttgatctcttgaagtcatgatctgcccaccttggcctcccaaagtgctgggattacaggcatgagccaccatgcccggcc i colAng1.NW_012116822v1 C 0 C 0 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e cebCap1.NW_016107581v1 4410758 40 + 4432243 I e calJac3.chr18 46478701 49 - 47448759 I e saiBol1.JH378197 20010 0 + 8899380 C a score=67628.000000 s hg38.chr3_KI270784v1_alt 165364 10 + 184404 CTTTTTGTAa s panTro5.chr3 58248 10 - 202621043 CTTTTTGTAa i panTro5.chr3 C 0 C 0 s panPan2.chr3 53186 10 - 205426864 CTTTTTGTAa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 71661 10 + 508821 CTTTTTGTAa i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 208880 10 - 123690457 CTTTTTGTAa i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 37580 10 - 85730 CTTTTTGTAa i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 57727 10 - 181584905 CTTTTTGTAa i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 52384 10 + 4899514 CTTTTTGTAa i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 52462 10 + 97742 ctttttgtaa i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3703183 10 - 108555830 cttttcgtaa i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 52714 10 + 85016 CTTTTTGTAa i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1031673 10 - 1267912 ctttttgtaa i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46478750 10 - 47448759 cttcctttaa i calJac3.chr18 I 49 C 0 s saiBol1.JH378197 20010 10 + 8899380 cttcctttgc i saiBol1.JH378197 C 0 C 0 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e cebCap1.NW_016107581v1 4410758 40 + 4432243 I a score=2901101.000000 s hg38.chr3_KI270784v1_alt 165374 337 + 184404 tattttattggctgggtcacaccacatgctcattcctaaaccaggcactgggaaagcaa--------atgtgattagcttagaataatcatttctcttttaaagctggggaggggTATTGGGATAATAAATATCCAAATAGATTTGTGTTTCTCCAGCAAGAAACAATAAGGAACTGCTCTTGGATAGGGAGCCAGCAGTGTTTGGTCTAGAAATTCATTGGAAAATCGTGAGCCGGGGAGGCATTAGATTAGATTTGAGAATTAGGGCATTCTGTT------------cagggattggcatgc--tttttctgtaaagggccaagtaggaaatattttagaccatgtggtc--------tctctct s panTro5.chr3 58258 337 - 202621043 tattttattggctgggtcacaccacatgctcattcctaaaccaggcactgggaaagcaa--------atgtgattagcttagaataatcatttctcttttgaagctggggaggggTATTGGGATAATAAATATCCAAATAGATTTGTGTTTCTCCAGCAAGAAACAATAAGGAACTGCTCTTGGATAGGGAGCCAGCAGTGTTTGGTCTAGAAATTCATTGGAAAATGGTGAGCCGGGGAGGCATTAGATTAGATTTGAGAATTAGGGCATTCTGTT------------cagggattggcatgc--tttttctgtaaagggccgagtaggaaatattttagaccatgtggtc--------tctctct i panTro5.chr3 C 0 C 0 s panPan2.chr3 53196 337 - 205426864 tattttattggctgggtcacaccacatgctcattcctaaaccaggcactgggaaagcaa--------atgtgattagcttagaataatcatttctcttttgaagctggggaggggTATTGGGATAATAAATATCCAAATAGATTTGTGTTTCTCCAGCAAGAAACAATAAGGAACTGCTCTTGGATAGGGAGCCAGCAGTGTTTGGTCTAGAAATTCATTGGAAAATGGTGAGCCGGGGAGGCATTAGATTAGATTTGAGAATTAGGGCATTCTGTT------------cagggattggcatgc--tttttctgtaaagggccgagtaggaaatattttagaccatgtggtc--------tctctct i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 71671 337 + 508821 tattttattggctgggtcacaccacatgctcattcctaaaccaggcactgggaaagcaa--------atgtgattagcttagaataatcatttctcttttgaagctggggaggggTATTGGGATAATAAATATCCAAATAGATTTGTGTTTCTCCAGCAAGAAACAATAAGGAACTGCTCTTGGATAGGGAGCCAGCAGTGTTTGGTCTAGAAATTCATTGGAAAATGGTGAGCCGGGGAGGCATTAGATTAGATTTGAGAATTAGGGCATTCTGTT------------caaggattggcatgc--tttttctgtaaagggccaagtaggaaatattttagaccatgtggtc--------tctctct i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 208890 337 - 123690457 tattttattggctgggtcacaccacatgctcattcctaaaccaggcactgggaaagcaa--------atgtgattagcttagaataatcatttctcttttgaagctggggaggggTATTGGGATAATAAATATCCAAATAGATTTGTGTTTCTCCAGCAAGAAACAATAAGGAACTGCTCTTGGATAGGGAGCCAGCAGTGTTTGGTCTAGAAGTTCATTGGAAGATCGTGAGCAGGGGAGGCATTAGATCAGATTTGAGAATTAGGGCATTCTGTT------------cagggattggcatgc--tttttctgtaaagggccaaggaagaaatattttagccaatgtgatc--------tctCTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 37590 355 - 85730 tattttattggctgggtcacaccacatgctcattcctaaaccaggcactgggaaagcaa--------atgtgattagcttagaataatcatttctcttttgaagctggggaggggTATTGGGATAATAAATATCCGAATAGATTTGTGTTTCTCCAGCAAGCAACAATAAGGAACTGCTCCTGGATAGGGAGCCAGCAGTGTTTGCTCTAGAAATTCACTGGAAAATCATGAGTAGGGGAGGCATTAGATTAGATTTGAGATTTTGGGCACTCTGTTCAGGGTATAAAGcagggattggcaggc--tttttctgtaaagggccaagtaggaaatattttagcccatgtggtctg--tctctctctct i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 57737 357 - 181584905 tattttattggctgggtcacaccacatgctcattcctaaaccaggcactgggaaagcaa--------atgtgattagcttagaataatcatttctcttttgaagctggggaggggtattgggataataaatatccgaatagatttgtgtttctccagcaagcaacaataaggaactgctcctggatagggagccagcagtgtttgcTCTAGAAATTCACTGGAAAATCATGAGTAGGGGAGGCATTAGATTAGATTTGAGATTTCGGGCACTCTGTTCAGGGTATAAAGcagggattggcaggc--tttttctgtaaagggccaagtaggaaatattttagcccatgtggtctgtctctctctctct i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 52394 355 + 4899514 tattttattggctgggtcacaccacatgctcattcctaaaccaggcactgggaaagcaa--------atgtgattagcttagaataatcatttctcttttgaagctggggaggggTATTGGGATAATAAATATCCGAATAGATTTGTGTTTCTCCAGCAAGCAACAATAAGGAACTGCTCCTGGATAGGGAGCCAGCAGTGTTTGCTCTAGAAATTCACTGGAAAATCATGAGTAGGGGAGGCATTAGATTAGATTTGAGATTTCGGGCACTCTGTTCAGGGTATAAAGcagggattggcaggc--tatttctgtaaagggccaagtaggaaatattttagcccatgtggtctg--tctctctctct i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 52472 357 + 97742 tattttattggctgggtcacaccacatgctcattcctaaaccaggcactgggaaagcaa--------atgtgattagcttagaataatcatttctcttttgaagctggggaggggTATTGGGATAATAAATATCCAAATAGATTTGTGTTTCTCCAGCAAGCAACAATAAGGAACTGCTCCTGGATAGGGAGCCAGCAGTGTTTGCTCTAGAAAGTCACTGGAAAATCATGAGTAGGGGAGGCATTAGATTAGATTTGAGATTTAGGGCACTCTGTTCAGGGTATAAAGcagggattggcaggc--tttttctgtaaagggccaagtaggaaatattttagcccatgtggtctgtctctctctctct i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3703193 365 - 108555830 aattttattagctgggtcacaccacatactcattcctaaaccaggcactgggaaagcaaatgtggttatgtgattagctttgaataatcacttaccttttgaagctggagaggagtattgagataataaatatccaaatagatttgtgattctccagcaagaaacaacaaggaactgctcttgggtagggagccagcagtgtttgcTCTAGAAATTCATTGGAAAATTGTGAGCAGGGGAGGCATTAGATTCAATTTGAGAATTAGGGCATTCTGTTCAGGGTATAAAGcagggattggcaagc--tttttctgtaaagggcagaataggaaatattttaggccatgtggtctctctttctctctct i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 52724 357 + 85016 tattttattggctgggtcataccacatgctcattcctaaaccaggcactgggaaagcaa--------atgtgattagcttagaataatcatttctcttttgaagctggggaggggTATTGGGATAATAAATATCCAAATAGATTTGTGTTTCTCCAGCAAGCAACAATAAGGAACTGCTTCTGGATAGGGAGCCAGCAGTGTTTGCTCTAGAAAGTCACTGGAAAATCATGAGTAGGGGAGGCATTAGATTAGATTTGAGATTTAGGGCACTCTGTTCAGGGTATAAAGcagggattggcaggc--tttttctgtaaagggccaagtaggaaatattttagcccatgtggtctgtctctctctctct i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1031683 356 - 1267912 tattttattggctgggtcacaccacatgctcattcctaaaccaggcattgggaaagcaa--------atgtgattagcttagaataatcatttctcttttgaagctgtggaggggTATTGGGATAATAAATATCCAAATAGATTTGTGTTTCTCCAGCAAGCAAC-ATAAGGAACTGCTCTTGGATAGGGAGCCAGCAGTGTTTGCTCTAGAAATTCATTGGAAAATCGTGAGTAGGGGAGGCATTAGATTAGATTTGAGAATTAGGGCACTCTGTTCAGGGTATAAAGcagggattggcacgc--tttttctgtaaagggccaagtaggaaatattttagcccatgtggtctgtctctgtctctct i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46478760 348 - 47448759 catcctatgggttgggtcacaccacatgttcatccctgaaccaggcactggaaaagcaaatgtaatgatgtgatgagcttagaataa----ttctcttttgaagctggggaggggtattgagatgataaataaccgaatagatttgagtttctccagcaagaaacaataaagaactgctcttgggtagggagccagcagtgtttgcTCTAGAGTTTCATTGGAAAATTGTGAGCAGCGGAGGC-----ATTAGATTTGAGAATTAGGGTGTTCTGTTCATGGTGTAAAGcagaaattggcgagc--tgcttctgtaaagggctaagtaggaaatattttaggcaatgcagtc--------tctctct i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 20020 357 + 8899380 tatcttattggctgggtcacaccacatactcatacctgaaccaggcaatgggaaagcacatgtaattatgtgattagcttagaataatcatttctcttttgaagctggggaggagtattggaataataaatgtccaaatagatttgtgtttctccagcaagaaataataaggaactgctcttgggtagggagctagcagtgtttgctgcaGGAATTCATTGGAAAATTGTGAGCAGGGAAGGCAATGGATTACATTTGAGAATTAGGGCATTCTGTTCATGGTATAAAGcagagattggcaagc--tttttctgtaaagggccaagtagaaaatattttaggccatgtggTG--------tctctct i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4410798 359 + 4432243 tatcttattggctgggtcataccatatgctcatccctgaaccaggcactgggaaggcaaatgtaattatgtaattagcttagaataatcatttctgttttgaagctggggaggggtattgcgataataaataaccaaatagatttgtgtttctccagcaagaaacaataaggaattgctcttgggtagggagccagtagtgtttgctacaGGAATTCATTGGAAAATTGTGAGCAGGGAAGGCATTAGATTAGATTTGAGAATTAGGGCATTCTATTCATGGTTTAAAGTagggactggcaaactttttttctctaaagggctaagtaggaaatattttagaccatgtggtc--------tctctct i cebCap1.NW_016107581v1 I 40 I 28 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I a score=125874.000000 s hg38.chr3_KI270784v1_alt 165711 31 + 184404 ----------------------------------------------------gtc--------------tctttt-----caagaaagatttaagcagctga s panTro5.chr3 58595 31 - 202621043 ----------------------------------------------------gtc--------------tctttt-----caagaaagatttaagcagctga i panTro5.chr3 C 0 C 0 s panPan2.chr3 53533 31 - 205426864 ----------------------------------------------------gtc--------------tctttt-----caagaaagatttaagcagctga i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 72008 31 + 508821 ----------------------------------------------------gtc--------------tctttt-----caagaaagatttaagcagcgga i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 209227 31 - 123690457 ----------------------------------------------------CTC--------------TCTTTT-----CAAGAAAGATTTAAGCAGCTGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 37945 37 - 85730 ----------------------------------------------------ctc--ttactc------tctttt-----caagaatgatttaagcagctga i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 58094 37 - 181584905 ----------------------------------------------------ctc--ttactc------TCTTTT-----CAAGaatgatttaagcagctga i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 52749 37 + 4899514 ----------------------------------------------------ctc--ttactc------tctTTT-----CAAGAATGAATTAAGCAGCTGA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 52829 39 + 97742 ----------------------------------------------------ctc--ttactc----tgtctTTT-----CAAGAATGATTTAAGCAGCTGA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3703558 28 - 108555830 ----------------------------------------------------ctc-----------------ttt-----caagaacgatttaagcagctga i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 53081 41 + 85016 ----------------------------------------------------ctctcttactc----tgtctttt-----caagaatgatttaagcagctga i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1032039 37 - 1267912 ----------------------------------------------------ctc--ttactc------tctttt-----caagaatgatttatacagctga i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46479108 100 - 47448759 gtctctctctctctgtctctctgtctctctgtctctctctctctctccccctctc--tctctctctctctctccctgtctctcaaatgatttcagcagctga i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 20377 83 + 8899380 ttctctctctctctctctc------------tctctctctctctctctctctctc--tttctctctctgtctcCC-----CAAAAATGATTTGAACAGCTGA i saiBol1.JH378197 C 0 C 0 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e cebCap1.NW_016107581v1 4411157 28 + 4432243 I a score=824835.000000 s hg38.chr3_KI270784v1_alt 165742 96 + 184404 aggccatgtggtctctgttgtagctactcaaccctgccattgt-gtgtgaaagcagtcacaggtagcat-gtcagtgagtaggcccaactgtactctc s panTro5.chr3 58626 96 - 202621043 aggccatgtggtctctgttgtagctactcaaccctgccattgt-gtgtgaaagcagtcacaggtagcat-gtcagtgagcaggcccaactgtactctc i panTro5.chr3 C 0 C 0 s panPan2.chr3 53564 96 - 205426864 aggccatgtggtctctgttgtagctactcaaccctgccattgt-gtgtgaaagcagtcacaggtagcat-gtcagtgagcaggcccaactgtactctc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 72039 96 + 508821 aggccatgtggtctctgttgtagctactcaaccctgccattgt-gtgtgaaagcagtcacaggtagcat-gtcagtgagtaggcccaactgtactctc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 209258 97 - 123690457 Aggccatgtggtctctgttgtagctactcaaccctgccattgt-gtgtgaaagcagtcacaggtagcccaacctgtgagtaggcccaactgtactctc i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 37982 97 - 85730 aggccatgtggtctctgttgtagctactcaaccctgccattgtagtgtgaaagcagtcataggtagcat-gtcagtgagtaggcctgactgtactctc i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 58131 97 - 181584905 aggccatgtggtctctgttgtagctactcaaccctgccattgtagtgtgaaagcagtcataggtagcat-gtcagtgagtaggcctgactgtactctc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 52786 97 + 4899514 Aggccatgtggtctctgttgtagctactcaaccctgccattgtagtgtgaaagcagtcataggtagcat-gtcagtgagtaggcctgactgtactctc i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 52868 97 + 97742 Aggccatgtggtctctgttgtagctactcaaccctgccattgtagtgtgaaagcagtcataggtagtat-gtcagtgagtaggcccgactgtactctc i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3703586 97 - 108555830 aggccatgtggtctctgtcgtagctactcaaccctgccattgtagtgtgaaagcagtcataggcagcat-gtcagtgaataggcatgactgtactctc i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 53122 97 + 85016 aggccatgtggtctctgttgtagctactcaaccctgccattgtagtgtgaaagcagtcataggtagtat-gtcagtgagtaggcccgactgtactctc i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1032076 97 - 1267912 aggccatgtgttctctgttgtagctactcaaccctgccattgtagtgtgaaagcagtcataggtagcat-gtcagtgagtaggcccgactgtactctc i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46479208 95 - 47448759 aggctgtgtgacctc--ttgtagctactcaaccctgccattgtagtgtgaaagcgggtataggcaacat-gtcagtgaataggcatgactgtactctc i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 20460 97 + 8899380 AGGCcatgtgatctctattgtagctactgaaccctgccatggtggtgagaaagcagtcataggtagcct-gtcagtcaataggcatgactgtactctc i saiBol1.JH378197 C 0 I 157 s cebCap1.NW_016107581v1 4411185 97 + 4432243 aagccatgtggtctctattgtagctactcaaccctgccactatagtgtgaaagcagtcataggtagcat-gtctgtgaataggcatggctgtactctc i cebCap1.NW_016107581v1 I 28 C 0 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I a score=219830.000000 s hg38.chr3_KI270784v1_alt 165838 28 + 184404 ataaaactttattgagaaaaaacatatg s panTro5.chr3 58722 28 - 202621043 ataaaactttattgagaaaaaacatatg i panTro5.chr3 C 0 C 0 s panPan2.chr3 53660 28 - 205426864 ataaaactttattgagaaaaaacatatg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 72135 28 + 508821 ataaaactttattgagaaaaatcatatg i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 209355 28 - 123690457 ataaaactttattgagaaaaaacatatg i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 38079 28 - 85730 ctaaaactttattaagataaaacatatg i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 58228 28 - 181584905 ctaaaactttattaagataaaacatatg i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 52883 28 + 4899514 ctaaaactttattaagataaaacatatg i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 52965 28 + 97742 ctaaaactttattaagataaaacatata i cerAty1.NW_012005170v1 C 0 I 219 s chlSab2.chr12 3703683 28 - 108555830 ataaaactttactgagaaaaaacttacg i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 53219 28 + 85016 ctaaaactttattaagataaaacatatg i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1032173 28 - 1267912 ataaaactttattaagataaaacatatg i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46479303 28 - 47448759 ataaaactttattgagaaaaaacatatg i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 20714 25 + 8899380 ataaaact---ttgagaaaaaacatatg i saiBol1.JH378197 I 157 C 0 s cebCap1.NW_016107581v1 4411282 28 + 4432243 ataaaactttgttgagaaaaaacatatg i cebCap1.NW_016107581v1 C 0 C 0 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I a score=1220943.000000 s hg38.chr3_KI270784v1_alt 165866 149 + 184404 gtaggcaggatttggcctgtggtctgcagtgtgctgacccctTATGTAGAGGATTGATGGAGGATAGATGTCACCTGGGAGCGTGTAGTTATTATTTACTAGGTA-TTTATTATGTTCGTGAGATGCCATCCACCTTTAAATTTGTGGTG s panTro5.chr3 58750 149 - 202621043 gtaggcaggatttggcctgtggtctgcagtgtgctgacccctTATGTAGAGGATTGATGGAGGATAGATGTCACCTGGGAGCGTGTAGTTATTATTTACTAGGTA-TTTATTATGTTCGTGAGATGCCATCCACCTTTAAATTTGTGGTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 53688 149 - 205426864 gtaggcaggatttggcctgtggtctgcagtgtgctgacccctTATGTAGAGGATTGATGGAGGATAGATGTCACCTGGGAGCGTGTAGTTATTATTTACTAGGTA-TTTATTATGTTCGTGAGATGCCATCCACCTTTAAATTTGTGGTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 72163 149 + 508821 gtaggcaggatttggcctgtggtctgcagtgtactgacccctTATGTAGAGGATTGATGGAGGACAGATGTCACCTGGGAGCGTGTAGTTATTATTTACTAGGTA-TTTATTATGTTCGTGAGATGCCATCCACCTTTAAATTTGTGGTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 209383 145 - 123690457 gtaggcaggatttggcctgtggtctgtagtgtgctgacccctTATGTAGAGGATTGATGGAGGATAGATGTCACCTGGGAGTGTATAGTTATTATTTACTAGGTA-TTTATTATGTTC----GATGCCATCCACCTTTAAATTTGTGGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 38107 149 - 85730 gtaggcaggatttggcctgtggtctgtagtgtgctgacccctTATGTAGAGGATCAATGGAGGATAGATGTCACCTGGGAGCATATAGGTATTACTGACTAGGTA-TTTATTATGTTCATGAGATGACATCCACCTTTAAATGTGTGGTG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 58256 149 - 181584905 gtaggcaggatttggcctgtggtctgtagtgtgctgacccctTATGTAGAGGATCAATGGAGGATAGATGTCACCTGGGAGCATATAGGTATTACTGACTAGGTA-TTTATTACGTTCATGAGATGACATCCACCTTTAAATGTGTGGTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 52911 149 + 4899514 gtaggcaggatttggcctgtggtctgtagtgtgctgacccctTATGTAGAGGATCAATGGAGGATAGATGTCACCTGGGAGCATATAGGTATTACTGACTAGGTA-TTTATTATGTTCATGAGATGACATCCACCTTTAAATGTGTGGTG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 53212 149 + 97742 GTAGGCAGGATTTGGCCTGTGGTCTGTAGTGTGCTGACCCCTTATGTAGAGGATCAATGGAGGATAGATGTCACCTGGGAGCATATAGGTATTACTGACTAGGTA-TTTATTATGTTCATGAGATGACATCCACCTTTAAATGTGTGGTG i cerAty1.NW_012005170v1 I 219 C 0 s chlSab2.chr12 3703711 149 - 108555830 gtaggcaggatttggcctgtggtctgcagtgtgctgacccATTTTGTAGAGGGTAGATGGAGGATAGGTGTCACCTGGGAGCATATAGTTATTATTTACTAGAAA-TTTATTATGTTCATTAGATGCCATGCACTTTTAAATTTGTGGTG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 53247 149 + 85016 gtaggcaggatttggcctgtggtctgtagtgtgctgacccctTATGTAGAGGATCAATGGAGGATAGATGTCACCTGGGAGCATATAGGTATTACTGACTAGGTA-TTTATTATGTTCATGAGATGACATCCACCTTTAAATGTGTGGTG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1032201 149 - 1267912 gtaggcaggatttgacctgtggtctgtagtgtgctgacccctTATGTGGAGGATCAGTGGAGGATAGATGTCACCTGGGAGCGTATAGTTATTACTGACTAGGTA-TTTATTATGTTCATGAGATGACATCCACCTTTAAATGTGTGGTG i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46479331 146 - 47448759 gtaggtaggatttggcctgtggtctctagtttgctgaccctt-ATGTAGAGGACAGTTGGAGGATAGATGTCACCT--GAGCATATAGTGATTATTTACCAGGTA-TTTATTATGTTCATTATATGCCATGCACTTTTAAATTTGTGCTG i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 20739 150 + 8899380 ttaggcgggatttggcctgtggtctgtagtgtgctgacccctAATGTAGAGGATAGATGGAGGATAGATGTCACCTGAGAGCATATGGTTATTATTTACTAGGTATTTTGTTGTATTCATTAGATTCCATGCACTTTTAAATTTGTGGTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4411310 146 + 4432243 gtaggcaggatttggcctgtggtctatagtatcctgaaccctTATGTAGAGGACAGATGGAGGATAGATGTCACCT--AAGCATATCGTTATTATTTAGTAGGTT-TTTATTATGTTCATTAGATGCCATGCAC-TTTAAATTTGTGGTT i cebCap1.NW_016107581v1 C 0 C 0 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692184 117 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I a score=908228.000000 s hg38.chr3_KI270784v1_alt 166015 105 + 184404 ATGAGCACAAGCTTCT-GAAACATGGAT-GGGATTTAGGGTAAGCATGCAGAGCGAGTGAAACTTTGCCATGTAAGGAGGCAGAGG--------------GGTGATGTTTTGCAGAAGGA----A s panTro5.chr3 58899 105 - 202621043 ATGAGCACAAGCTTCT-GAAACATGGAT-GGGATTTAGGGTAAGCATGCAGAGCGACTGAAACTTTGCCATGTAAGGAGGCAGAGT--------------GGTGATGTTTTGCAGAAGGA----A i panTro5.chr3 C 0 C 0 s panPan2.chr3 53837 105 - 205426864 ATGAGCACAAGCTTCT-GAAACATGGAT-GGGATTTAGGGTAAGCATGCAGAGCGAATGAAACTTTGCCATGTAAGGAGGCAGAGT--------------GGTGATGTTTTGCAGAAGGA----A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 72312 105 + 508821 ATGAGCACAAGCTTCT-GAAACATGGAT-GGGATTTAGGGTAAGCGTGCAGAGTGAGTGAAACTTTGCCATGTAAGGAGGCAGAGG--------------GGTGATGTTTTGCAGAAGGA----A i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 209528 105 - 123690457 ATGAGCACAAGCTTCT-GAAAAATGGAT-AGGATTTAGGGTAAGCATGCAGAGTGAGTGAAGCTTTGCCATGTAAGGAGGCAGAGG--------------GATGATGTTTTGCAGAAGGA----A i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 38256 105 - 85730 ATGAGCACAAGCTTCT-GAAAAATGGAT-AGGATTTAGGGGAAGCATGCAGAGTGAGTGAAACTTTGTCAGGCAAGGAGGCAGAGG--------------GATGATGTTTTGCAGAAGGA----A i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 58405 105 - 181584905 ATGAGCACAAGCTTCT-GAAAAATGGAT-AGGATCTAGGGGAAGCATGCAGAGTGAGTGAAACTTTGTCAGGCAAGGAGGCAGAGG--------------GATGATGTTTTGCAGAAGGA----A i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 53060 105 + 4899514 ATGAGCACAAGCTTCT-GAAAAATGGAT-AGGATTTAGGGGAAGCATGCAGAGTGAGTGAAACTTTGTCAGGCAAGGAGGCAGAGG--------------GATGATGTTTTGCAGAAGGA----A i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 53361 105 + 97742 ATGAGCACAAGCTTCT-GAAAAATGGAT-AGGATTTAGGGGAAGCATGCAGAGTGAGTGAAACGTTGTCAGGCAAGGAGGCAGAGG--------------GATGATGTTTTGCAGAAGGA----A i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3703860 106 - 108555830 ATGACTGCAAGCTTCTAAAAAAATGGGT-AGGATTTAGGGGAAGCATGTAGAGTGAGTGAAACTTTGCCAGGTAAGGAGGCAGAGG--------------GATGATGTTTTCTAGAAGGA----A i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 53396 105 + 85016 ATGAGCACAAGCTTCT-GAAAAATGGAT-AGGATTTAGGGGAAGCATGCAGAGTGAGTGAAACTTTGCCAGGCAAGGAGGCAGAGG--------------GATGATGTTTTGCAGAAGGA----A i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1032350 105 - 1267912 ATGAGCACAAGCTTCT-GAAAAATGGAT-AGGATTTAGGGGAAGCATGCAGAGTGAGTGAAACTTTGCCAGGCAAGGAGGCAGAGG--------------GATGATGTTTTGCAGAAGGA----A i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46479477 105 - 47448759 ATGAGTGCAAACTTCT-AAGAAGTGCGT-GGGATTTAGGGTAAGCATGCAGAGTGAGTAAAATTCTGCCAGGTAAGAAGACAGAAG--------------GATGAAGTTTTCCAGAAGGG----A i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 20889 123 + 8899380 ATGAGTACAAGCTTCT-AAAAGGTGTAT-AAGATTTAGGGTAAGCATGTAGAGTGAGTGAAACTTTGCCAGATAAGGAGGCAGAGGGATGATGTTTTCCAGATGATGTTTTCCAGAAGGAGTATA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4411456 105 + 4432243 ATTAGTGCAAGCTTTT-AAAAAGTAGAT-AGGATTTAGGATAAGCATGCAGAGTGAGTGAAACTTTGCCAGGTAAGGAGGCAGAGA--------------AATGATGTTTTCCAGAAGGA----A i cebCap1.NW_016107581v1 C 0 C 0 s dasNov3.JH570393 1692301 99 - 2296528 ATAAGTATGGGGATTT-AAAATAAGTATGGGGATTTAAAATA-------AGAGTGGGGAGAAGTGTGCCAGGTGAAGAGGCAGGAG--------------GGCGATGTTTGGCAGAAGAA----A i dasNov3.JH570393 I 117 I 362 e canFam3.chr2 79078202 25896 - 85426708 I e otoGar3.GL873538 19630652 20804 - 27850971 I a score=467672.000000 s hg38.chr3_KI270784v1_alt 166120 55 + 184404 TATCTAACAA-CTTGCACGTTTGACAGAAACAACAGCTATGAAGCCTGCAAATTTG s panTro5.chr3 59004 55 - 202621043 TATCTAACAA-CTTGCACGTTTGACAGAAACAACAGCTATGAAGCCTGCAAATTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 53942 55 - 205426864 TATCTAACAA-CTTGCACGTTTGACAGAAACAACAGCTATGAAGCCTGCAAATTTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 72417 55 + 508821 TATCTAACAA-CTTGCACGTTTGACAGAAACAGCAGCTGTGAAGCCTGCAAATTTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 209633 55 - 123690457 TATCTAACAA-CTTGCACGTTTGACAGAAACAACAGCTATGAAGCCTGCAAATTTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 38361 56 - 85730 TATCTAACAAGCTTGCATGTTTGACAGAAACAACAGCTATGAAGCCTGCAAATTTG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 58510 56 - 181584905 TATCTAACAAGCTTGCATGTTTGACAGAAACAACAGCTATGAAGCCTGCAAATTTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 53165 56 + 4899514 TATCTAACAAGCTTGCATGTTTGACAGAAACAACAGCTATGAAGCCTGCAAATTTG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 53466 56 + 97742 TATCTAACAAGCTTGCATGTTTGACAGAAACAACAGCTATGAAGCCTGCAAATTTG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3703966 56 - 108555830 TATCTAACTAACTTGCATGTTTGGCAGAAACAGCAGCTGTGAAGCCTGCAAATTTG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 53501 56 + 85016 TATCTAACAAGCTTGCATGTTTGACAGAAACAACAGCTATGAAGCCTGCAAATTTG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1032455 56 - 1267912 TATCTAACAAGCTTGCATGTTTGACAGAAACAACAGCTACGAAGCCTGCAAATTTG i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46479582 56 - 47448759 TATCTAACAAGCTTGCATGATTGACAGAAACAGCAGCTACAAAGCCTGCACATTTC i calJac3.chr18 C 0 I 1 s saiBol1.JH378197 21012 56 + 8899380 TATATAACAAGCTTGCTTGTTTGACAGAAACAGCAGCTACAAACCCTGCAAATTTG i saiBol1.JH378197 C 0 I 109 s cebCap1.NW_016107581v1 4411561 56 + 4432243 TATCTAACAAACCTGCATGTTTGACAGAAACAGCACCTACAAAACATGCAAATTTG i cebCap1.NW_016107581v1 C 0 I 1 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692400 362 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I a score=3751.000000 s hg38.chr3_KI270784v1_alt 166175 1 + 184404 T s panTro5.chr3 59059 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 53997 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 72472 1 + 508821 T i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 209688 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 38417 1 - 85730 T i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 58566 1 - 181584905 T i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 53221 1 + 4899514 T i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 53522 1 + 97742 T i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3704022 1 - 108555830 G i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 53557 1 + 85016 T i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1032511 1 - 1267912 T i colAng1.NW_012116822v1 C 0 C 0 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692400 362 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e cebCap1.NW_016107581v1 4411617 1 + 4432243 I e calJac3.chr18 46479638 1 - 47448759 I e saiBol1.JH378197 21068 109 + 8899380 I a score=229873.000000 s hg38.chr3_KI270784v1_alt 166176 34 + 184404 AAAAAGGAGAAGAAGGTGCAAA--AGGTAAGACACT s panTro5.chr3 59060 34 - 202621043 AAAAAGGAGAAGAAGGTGCAAA--AGGTAAGACACT i panTro5.chr3 C 0 C 0 s panPan2.chr3 53998 34 - 205426864 AAAAAGGAGAAGAAGGTGCAAA--AGGTAAGACACT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 72473 34 + 508821 AAAAAGGAGAAGAAGGTGCAAA--AGGTAAGACACT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 209689 34 - 123690457 AAAAAGGAGAAGAAGGTGCAAA--AGGTAAGACACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 38418 31 - 85730 AAAAA---GAAGAAGGTGCAAA--AGGTAAGACACT i rheMac8.chrUn_NW_014858614v1 C 0 I 171 s macFas5.chr6 58567 31 - 181584905 AAAAA---GAAGAAGGTGCAAA--AGGTAAGACACT i macFas5.chr6 C 0 I 171 s macNem1.NW_012020287v1 53222 31 + 4899514 AAAAA---GAAGAAGGTGCAAA--AGGTAAGACACT i macNem1.NW_012020287v1 C 0 I 171 s cerAty1.NW_012005170v1 53523 31 + 97742 AAAAA---GAAGAAGGTGCAAA--AGGTAAGACACT i cerAty1.NW_012005170v1 C 0 I 171 s chlSab2.chr12 3704023 34 - 108555830 AAAAAAGGAAAGAAGGTGCAAA--AGGTAAGACACT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 53558 31 + 85016 AAAAA---GAAGAAGGTGCAAA--AGGTAAGACACT i manLeu1.NW_012101680v1 C 0 I 171 s colAng1.NW_012116822v1 1032512 34 - 1267912 AAAAAGGAGAAGAAGGTGCAAA--AGGTAAGACACT i colAng1.NW_012116822v1 C 0 I 178 s calJac3.chr18 46479639 32 - 47448759 --AAAAATGAAGAAGGTACAAA--CCCTAAGACACT i calJac3.chr18 I 1 C 0 s saiBol1.JH378197 21177 36 + 8899380 aagaagaagaagaagGTGCGAAGGGTCTAAATGTCT i saiBol1.JH378197 I 109 C 0 s cebCap1.NW_016107581v1 4411618 33 + 4432243 -AAACAAAAGAGAAAGTGCAAA--GGATAAGACACT i cebCap1.NW_016107581v1 I 1 C 0 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692400 362 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I a score=15866.000000 s hg38.chr3_KI270784v1_alt 166210 7 + 184404 TATGTGT s panTro5.chr3 59094 7 - 202621043 TATGTGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 54032 7 - 205426864 TATGTGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 72507 7 + 508821 TATGTGT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 209723 7 - 123690457 TATGTGT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr12 3704057 7 - 108555830 TGAGTGT i chlSab2.chr12 C 0 C 0 s calJac3.chr18 46479671 7 - 47448759 TGAGTGT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 21213 7 + 8899380 TGAATGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4411651 7 + 4432243 TGAGTGT i cebCap1.NW_016107581v1 C 0 C 0 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692400 362 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e cerAty1.NW_012005170v1 53554 171 + 97742 I e colAng1.NW_012116822v1 1032546 178 - 1267912 I e rheMac8.chrUn_NW_014858614v1 38449 171 - 85730 I e manLeu1.NW_012101680v1 53589 171 + 85016 I e macNem1.NW_012020287v1 53253 171 + 4899514 I e macFas5.chr6 58598 171 - 181584905 I a score=24778.000000 s hg38.chr3_KI270784v1_alt 166217 3 + 184404 CTC s panTro5.chr3 59101 3 - 202621043 CTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 54039 3 - 205426864 CTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 72514 3 + 508821 CTC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 209730 3 - 123690457 CTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 38620 3 - 85730 ctc i rheMac8.chrUn_NW_014858614v1 I 171 C 0 s macFas5.chr6 58769 3 - 181584905 ctc i macFas5.chr6 I 171 C 0 s macNem1.NW_012020287v1 53424 3 + 4899514 ctc i macNem1.NW_012020287v1 I 171 C 0 s cerAty1.NW_012005170v1 53725 3 + 97742 ctc i cerAty1.NW_012005170v1 I 171 C 0 s chlSab2.chr12 3704064 3 - 108555830 CTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 53760 3 + 85016 ctc i manLeu1.NW_012101680v1 I 171 C 0 s calJac3.chr18 46479678 3 - 47448759 CTC i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 21220 3 + 8899380 CTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4411658 3 + 4432243 CTC i cebCap1.NW_016107581v1 C 0 C 0 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692400 362 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I e colAng1.NW_012116822v1 1032546 178 - 1267912 I a score=3909821.000000 s hg38.chr3_KI270784v1_alt 166220 487 + 184404 TACTCTTAA-----CCATGTAAAGCGACTGGGAGACAAGGGAAGCTTCAGCCATAATTAATGCTATAGTTGCCTTGTCACAAATCCATGGAGTACATATGTCTTATTACAAGGTTTTCACCCATCCATGATAAAATAAAATGATGGAGCTCCAGTTTATTCATTTGAAAATATTGGTGTTgccgggaatggtggctcctgcctgtaatcccagcagtgttagaggctgagacagaaggatcccttgaggccaggaggtccagcagcctgggcaacatagcgagaccccatgtcaa-t--ttttttt------t-taa--tgttgctgggtgtggtgttctgcacctgtaatcccagctacttgggaggctgaagcaggagaactgcttgagcctcgaagtttgaggctgcagttagctatgatagcaacattacactgtagcctgggtggcagagtaaga-ccccatctctgataaaaaataaaaTCAAATAAGATAAG-----ATAAAA s panTro5.chr3 59104 486 - 202621043 TACTCTTAA-----CCATGTAAAGCGACTGGGAGACAAGGGAAGCTTCAGCCATAATTAATGCTATAGTTTCCTTGTCACAAATCCATGGAGTACATATGTCTTATTACAAGGTTTTCACCCATCCATGATAAAATAAAATGATGGAGCTCCAGTTTATTCATTTGAAAATATTGGTGTTgccgggaatggtggctcctgcctgtaatcccagcagtgttagaggctgagacagaaggatcccttgaggccaggaggtccagcagcctgggcaacatagcgagaccccatgtcta-t--ttttttt------t--aa--tgttgctgggtgtggtgttctgcacctgtaatcccagctacttgggaggctgaagcaggagaactgcttgagcctcgaagtttgaggctgcagttagctatgatagcaacattacactgtagcctgggtggcagagtaaga-ccccatctctgataaaaaataaaGTCAAATAAGATAAG-----ATAAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 54042 473 - 205426864 TACTCTTAA-----CCATGTAAAGCGACTGGGAGACAAGGGAAGCTTCAGCCATAATTAATGCTATAGTTTCCTTGTCACAAATCCATGGAGTACATATGTCTTATTACAAGGTTTTCACCCATCCATGATAAAATAAAATGATGGCGCTCCAGTTTATTCATTTGAAAATATTGGTGTTgccgggaatggtggctcctgcctggaatcccagcagtgttagaggctgagacagaaggatcccttgaggccagga-------------gggcaacatagcgagaccccatgtcta-t--ttttttt------t--aa--tgttgctgggtgtggtgttctgcacctgtaatcccagctacctgggaggctgaagcaggagaactgcttgagcctcgaagtttgaggctgcagttagctatgatagcaacattgcactgtagcctgggtggcagagtaaga-ccccatctctgataaaaaataaaGTCAAATAAGATAAG-----ATAAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 72517 485 + 508821 TACTCTTAA-----CCATGTAAAGCGACTGGGAGACAAGGGAAGCTTCAGCCATAATTAATGCTATAGTTTCCTTGTCACAAATCCATGGAGTACATATGTCTTATTACAAGGTTTTCACCCATCCATGATACAATAAAATGATGGAGCTCCAGTTTATTCATTTGAAAATATTGGTGTTgccgggaatggtggctcctgcctgtaatcccagcagtgttagaggctgagacagaaggatcccttgaggccaggaggtccagcagcctgggcaacatagcgagaccccatgtcta-t--ttttttt------t--aa--tgttgctgggtgtggtgttctgcacctgtaatcccagctacttgggaggctgaagcaggagaactgcttgagcctagaagtttgaggctgcagctagctatgatagcaacattacactgtagcctgagtggcagagtgaga-ccccatctctgat-aaaaataaagtcaaataagaaaag-----ataaaA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 209733 481 - 123690457 TACTCTT-A-----CCACGTAAAGAGACTGGGAGACAAGGGAAGCTTCAGCCATAGTTAATGCTATAGTTTTCTTATCACAAATCCATGGAGTACATAAGTCTTATTACAAGGTTTTCACCCATCCGTGATAAAATAAAATGATGGAGCTCCAGTTTATTCATTTGAAAATATTGGTGTTgccagggatggtggctcctgcctgtaatcccagcagtgctggaggctgaggcagaaggatcccttgaggccaggaggtccaacagcctgggcaatatagcgagaccccatgtcta-t--ttttttt------tttaa--tgttgctgggtgtggtgttctgcacctataatcccagctacttgggaggctgaagcaggagaactgcttgagcctagaagtttgaggttgcagttagctatgatagcaacattgcactgtagcctgggtggcagagtgaga-ccccatctctgat-aaaaaTCAAGTCAAAT-----AAG-----ATAAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 38623 483 - 85730 TACTCTTAA-----CCATGTAAAGAGACTGGGAGACAAGGGAATCTTCAGCCACAGTTAATGCTATAGTTTCCTTGTCACAAATCCAC-GAGTATACAAGCCTTATTACAAGGTTTTCACCCATCCATGATAAAATAAAATGATGGAGCTCCACTTTATTCATTTGAAAATATTGGTGTTgctggggatggtggctcctgcctgtaatcccaatagtgttggaggctgagacagaaagatcccttgaggccagaaggtccagcagcctgggcaacatagcgagaccccatgtctg----ttttttt------t--aa--tgtagctgggtgtggtgttctgcacctgtaatcccagctacttgggaggctgaagcaggagaactgcttgagcctagaagtttgaggctgcagttagctatgatagcaacattacactgtagcctgggtggcagagtgaga-ccccatctctgat-aaaaaTCAAGTCAAATAAGATAAG-----ATAAAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 58772 478 - 181584905 TACTCTTAA-----CCATGTAAAGAGACTGGGAGACAAGGGAATCTTCAGCCGCAGTTAATGCTATAGTTTCCTTGTCACAAATCCAC-GAGTATACAAGCCTTATTACAAGGTTTTCACCCATCCATGATAAAATAAAATGATGGAGCTCCACTTTATTCATTTGAAAACATTGGTGTTgctggggatggtggctcctgcctgtaatcccaatagtgttggaggctgagacagaaagatcccttgaggccagaaggtccagcagcctgggcaacatagcgagaccccacgtctg----ttttttt------t--aa--tgtagctgggtgtggtgttctgcacctgtaatcccagctacttgggaggctgaagcaggagaactgcttgagcctagaagtttgaggctgcagttagctatgatagcaacattacactgtagcctgggtggcagagtgaga-ccccatctctgat-aaaaaTCAAGTCAAATAAGATAAG----------A i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 53427 482 + 4899514 TACTCTTAA-----CCATGTAAAGAGACTGGGAGACAAGGGAATCTTCAGCCGCAGTTAATGCTATAGTTTCCTTGTCACAAATCCAC-GAGTATACAAGCCTTATTACAAGGTTTTCACCCATCCATGATAAAATAAAATGATGGAGCTCCACTTTATTCATTTGAAAATATTGGTGTTgctggggatggtggctcctgcctgtaatcccaatagtgttggaggctgagacagaaagatcccttgaggccagaaggtccagcagcctgggcaacatagcgagaccccatgtctg-----tttttt------t--aa--tgtagctgggtgtggtgttctgcacctgtaatcccagctacttgggaggctgaagcaggagaactgcttgagcctagaagtttgaggctgcagttagctatgatagcaacattacactgtagcctgggtggcagagtgaga-ccccatctctgat-aaaaaTCAAGTCAAATAAGATAAG-----ATAGAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 53728 485 + 97742 TACTCTTAA-----CCATGTAAAGAGACTGGGAGACAAGGGAAGCTTCAGCCGCAGTTAATGCTATAGTTTCCTTGTCACAAATCCACGGAGTATACAAGCCTTATTACAAGGTTTTCACCCATCCATGATAAAATAAAATGATGGAGCTCCACTTTATTCATTTGAAAATATTGGTGTTgctggggatggtggctcctgcctgtaatcccaatagtgttggaggctgagacagaaagatcccttgaggctagaaggtccagcagcctgggcaacatagcgagaccccatgtctg-t--ttttttt------c--aa--tgtagctgggtgtggtgttctgcacctgtaatcccagctacttgggaggctgaagcaggagaactgcttgagcctagaagtttgaggctgcagttagctatgatagcaacattacactgtagcctgggtggcagagtgaga-ccccatctctgat-aaaaaTCAAGTCAAATAAGATAAG-----ATAAAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3704067 491 - 108555830 TACTCTTAA-----TCATGTGAAGAGACTGGGAGACAAGGGAAGCTTCAGCCGTAGTTAATGCTATAGTTTCCTTGTCACAAATCCATGGAGTCCATGAGTC-TATTACAAGGTTTTCACCCATCCATGATAAAATAAAATGATGGAGCTCCAGTTTATTCATTTGAAAATATTGGTGTTgccagggatggtggctcctgcctgtgatcttgtcagtgttggaggctgagatagaagcatcccttgaggctaggaggtccagcagcctgggcaacatcgccagaccttgtgtcta-t--tttttaa------a--aatctgtagctgggtgtggtgttctgcccctgtgatctcagctacttgggaggctaaagcaggaaaattacttgagcctagaagtttgatcctacagttagttacgatagcaaccttacactgaagcctaggtggcagagtgaga-ccccatctctaag-aaaaaTCAAGTCaaataggataagatacaataaag i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 53763 485 + 85016 TACTCTTAA-----CCATGTAAAGAGACTGGGAGACAAGGGAAGCTTCAGCCGCAGTTAATGCTATAGTTTCCTTGTCACAAATCCACGGAGTATACAAGCCTTATTACAAGGTTTTCACCCATCCATGATAAAATAAAATGATGGAGCTCCACTTTATTCATTTGAAAATATTGGTGTTgctggggatggtggctcctgcctgtaatcccaatagtgttggaggctgagacagaaagatcccttgaggctagaaggtccagcagcctgggcaacatagcgagaccccatgtctg-t--ttttttt------c--ag--tgtagctgggtgtggtgttctgcacctgtaatcccagctacttgagaggctgaagcaggagaactgcttgagcctagaagtttgaggctgcagttagctatgatagcaacattacactgtagcctgggtggcagagtgaga-ccccatctTTGAT-Aaaaatcaagtcaaataagataag-----ataaaa i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1032724 485 - 1267912 TACTCTTAA-----CCATGTAAAGAGACTGGGGGACAAGGGAAGCTTCAGCCACAGTTAATGCTATAGTTTCCTTGTCACAAATCCACGGAGTATACAAGTCTTATTACAAGGTTTTCACCCATCCATGATAAAATAAAATGATGGAGCTCCACTTTATTCATTTGAAAATATTGTTGTTgctggggatggtggctcctgcctgtaatcccaacagtgttggggtctgagacagaaagatcccttgaggctagaaggtccagcagcct-ggcaacatagcgagaccccatgtctgtt--ttttttt------a--aa--tgtagctgggtgtggtgttctgcacctgtaatcccagctacttggaaggctgaagcaggagaactgcttgagcctagaagtttgaggctgcagttagctatgatagcagtattacaccgtagcctgggtggcagagtgaga-ccccatctctgat-aaaaaTCAAGTCAAGTAAGATAAG-----ATAAAA i colAng1.NW_012116822v1 I 178 C 0 s calJac3.chr18 46479681 479 - 47448759 TACTCTTAA-----TTACGTAAAGAGTC--AGAGGCAAGAGAAGCTTCAGCTGTAGTTAATGCTATAGTTTCCTTGACACAAATCTAGGGAGTATATGAGTC-TATTAC-AGATTTTTGCCCATCCATGATACAATAAAATGATGTAGCTCCGGTAGATTTATTTGAAAATATTGGTGTTgctgggcatgatggctcctgcctgtaatgccagcagtgttggaggctgagatagaaggatcccttaaggccagaaggtccaccagcctgggcaa----------ccccatttcta-ttgttttttttttagaa--aa--tgtagctgggtgtggtgttctgcacct-tcatcccagctacttgagaggctgaagcaggagacttgcttgagcctagaagtttgaggctgcagttagctatgatagcaacattacactgtagcctgggtggcagaatgagacccccatctctaat-aaaaaTCAAATCAAATAAGATAAG-----ATAAAA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 21223 493 + 8899380 TACTCTTGAATGTCTTACTCTTAACCAT--GTAGACCAGGGAAGCTTCAGTCATAGTTAATGCTACAGTTTCCTTGTCACAAATCCATGAACTACCTGAGTC-TATTATAAGGTTTTCACCCATCCATGATAAAATAAAATGATGGACCTCCAGTTTATTCATTT-AAAATATTGGTGTTgctgggcatggtggctcctgcctgcaatccctacagtgttggaggctgagacagaaaaatcccttgaggccaggaagtccagcagcctgggaaacatagcaaggctccgtgtcta-tttttctttt------a--aa--tgtaactgggtgtggtgttctgcccctgtaattccagctacttgagaaacagaagcaggagagttgtttgagcctagaagtttggggctacagttagctatgacagcaaaattacactgtagcctgggtggcagagcgaga-ccACACCTCTAAT-Gaaaatcaagtcaaatgagataagaaaaaataaaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4411661 473 + 4432243 TACTCTTAA-----CTAC------------ATAGACAAGGGAAGCTTCAGCTGTAGTTAATGCTATAGTTTCCTTGTCACAAATTCATGAAGTACATGAATC-TATTGCAAGGTTTTCACCCATCCATGATAAGATAAAATGATGGGACTCCACTTTATTCATTT-AAAATACTGGTGTTgccaggcatggtggcttctgcctatgatccccacagtgttggaggctgagacagaaggatcccttaagttcaggaagtccagcagcctaggcaaaatagcaagccccaatgtcta-tttttgtttt------a--aa--tgtagccaggtatggcattctgcctctgtaatcccagctacatgagaggctgaagcaggagagttgcttgagcctagacatttaaggctgcagttagctatgacagcaacattacactgtagcctgggtggcagagtgaga-ccccatctctaat-aaaaaTCAAGTCAAATAAGATAAG-----ATAAAA i cebCap1.NW_016107581v1 C 0 C 0 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692400 362 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I a score=661204.000000 s hg38.chr3_KI270784v1_alt 166707 84 + 184404 TAAAATGTTGGTCTTTTTC-TTGGAATTATGCTTTTTAAATTTA--TTTTGC--TTTTAAAAAAA----ATTTAAGAAATGACAATAATAGTT s panTro5.chr3 59590 84 - 202621043 TAAAATGTTGGTCTTTTTC-TTGGAATTATGCTTTTTAAATTTA--TTTTGC--TTTTAAAAAAA----ATTTAAGAAATGACAATAATTGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 54515 84 - 205426864 TAAAATGTTGGTCTTTTTC-TTGGAATTATGCTTTTTAAATTTA--TTTTGC--TTTTAAAAAAA----ATTTAAGAAATGACAATAATTGTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 73002 83 + 508821 TAAAGTGTTGGTCTTTTTC-TTGGAATTATGCTTTTTAAATTTA--TTTTGC--TTTT-AAAAAA----ATTTAAGAAATGACAATAATAGTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 210214 84 - 123690457 TAAAATGTTGGTCTTTTTC-TTGGAATTATGCTTTTTTAATTTA--TTTTGC--TTTTTAAAAAA----ATTTAAGAAAGGACAATAATAGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 39106 84 - 85730 TAAAATGTAGGTCTTTTTC-TTGGAATTATGTTTTTTAAATTTG--TTTTGC--TTTTTTAAAAA----ATTTAAGAAATGACAATAATAGTT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 59250 84 - 181584905 TAAAATGTAGGTCTTTTTC-TTGGAATTATGTTTTTTAAATTTG--TTTTGC--TTTTTTAAAAA----ATTTAAGAAATGACAATAATAGTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 53909 84 + 4899514 TAAAATGTAGGTCTTTTTC-TTGGAATTATGTTTTTTAAATTTG--TTTTGC--TTTTTTAAAAA----ATTTAAGAAATGACAATAATAGTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 54213 84 + 97742 TAAAATGTAGGTCTTTTTC-TTGGAATTATGCTTTTTAAATTTG--TTTTGC--TTTTTAAAAAA----ATTTAAGAAATGACAATAATAGTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3704558 86 - 108555830 taaaatGTTGGTCTTTTTC-TTGGAATTATGCTTTTCTAATTTG--TTTTGCTTTTTTTAAATAA----ATTTAAGAAACAACAGTAATAGTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 54248 84 + 85016 taaaatGTAGGTCTTTTTC-TTGGAATTATGCTTTTTAAATTTG--TTTTGC--TTTTTAAAAAA----ATTTAAGAAATGACAATAATAGTT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1033209 84 - 1267912 TAAAATGTAGGTCTTTTTC-TTGGAATTATGCTTTTTTAATTTG--TTTTGC--TTTTTAAAAAC----ATTTAAGAAATGACAATAATAGTT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46480160 78 - 47448759 TGCAATGTTGGTCTTTTGTTTTGGAATTATGCtttttaaa------tttttt--ttttttta-------atttaaGAAATGACAATAATAGTT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 21716 73 + 8899380 taaaatGTTGGTCTTTTTCTTTTTAAATTTGTTTT-----------GCTTTT--TTTTCTAA-------ATTTAAGAAATGATAATGATAGTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4412134 83 + 4432243 TAAAATGTTGGtctttttc-ttggaattatgctttttaaatttgtttttctt--tttTCTAA-------ATTTAAGAAATGACCATAATAATT i cebCap1.NW_016107581v1 C 0 C 0 s dasNov3.JH570393 1692762 87 - 2296528 TAAAATACTTGTCTTTTTC-TTGGCATTATGTCTTTTTCA-TTG--TTTTGT--TTTTAAAAAAACCTCATTTAGAAAATAACAATAGTAGTT i dasNov3.JH570393 I 362 I 35152 e canFam3.chr2 79078202 25896 - 85426708 I e otoGar3.GL873538 19630652 20804 - 27850971 I a score=46669.000000 s hg38.chr3_KI270784v1_alt 166791 5 + 184404 GGTTT s panTro5.chr3 59674 5 - 202621043 GGTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 54599 5 - 205426864 GGTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 73085 5 + 508821 GGTTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 210298 5 - 123690457 GGTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 39190 5 - 85730 GGTTT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 59334 5 - 181584905 GGTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 53993 5 + 4899514 GGTTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 54297 5 + 97742 GGTTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3704644 5 - 108555830 GGTTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 54332 5 + 85016 GGTTT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1033293 5 - 1267912 GGTTT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46480238 5 - 47448759 GGTTT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 21789 5 + 8899380 GTTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4412217 5 + 4432243 GGTTT i cebCap1.NW_016107581v1 C 0 C 0 e canFam3.chr2 79078202 25896 - 85426708 I e dasNov3.JH570393 1692849 35152 - 2296528 I e otoGar3.GL873538 19630652 20804 - 27850971 I a score=126735.000000 s hg38.chr3_KI270784v1_alt 166796 12 + 184404 ATATAAGGCTTT- s panTro5.chr3 59679 12 - 202621043 ATATAAGGCTTT- i panTro5.chr3 C 0 C 0 s panPan2.chr3 54604 12 - 205426864 ATATAAGGCTTT- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 73090 12 + 508821 ATATAAGGCTTT- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 210303 12 - 123690457 ACATAAGGCTTT- i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 39195 12 - 85730 ATATAAGGCTTT- i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 59339 12 - 181584905 ATATAAGGCTTT- i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 53998 12 + 4899514 ATATAAGGCTTT- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 54302 12 + 97742 ATATAAGGCTTT- i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3704649 12 - 108555830 ATATAAGGCTTT- i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 54337 12 + 85016 ATATAAGGCTTT- i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1033298 12 - 1267912 ATATAAGGCTTT- i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46480243 12 - 47448759 ATACAAGGCTTT- i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 21794 12 + 8899380 GTATAAGGCTTT- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4412222 12 + 4432243 ATATAAGGCTTT- i cebCap1.NW_016107581v1 C 0 C 0 s canFam3.chr2 79104098 12 - 85426708 atacaaagcttt- i canFam3.chr2 I 25896 C 0 s dasNov3.JH570393 1728001 13 - 2296528 atacaagaacttt i dasNov3.JH570393 I 35152 C 0 e otoGar3.GL873538 19630652 20804 - 27850971 I a score=495904.000000 s hg38.chr3_KI270784v1_alt 166808 45 + 184404 CAGAAAC-TGGCTTCTGCCCAAATCTCCATCTGCAGCCCCTTCTCT s panTro5.chr3 59691 45 - 202621043 CAGAAAC-TGGCTTCTGCCCAAATCTCCATCTGCAGCCCCTTCTCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 54616 45 - 205426864 CAGAAAC-TGGCTTCTGCCCAAATCTCCATCTGCAGCCCCTTCTCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 73102 45 + 508821 CAGAAAC-TGGCTTCTGCCCAAATCTCCATCTGCAGCCCCTTCTCT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 210315 45 - 123690457 CAGAAAC-TGGCTTCTGCCCAAATCTCCATCTGCAGCCCCTTCTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 39207 44 - 85730 CAGAAAC-CGGCTTCTGCCCAAATCTCCATCT-CAGCCCCTTCTCT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr6 59351 45 - 181584905 CAGAAAC-CGGCTTCTGCCCAAATCTCCATGTGCAGCCCCTTCTCT i macFas5.chr6 C 0 N 0 s macNem1.NW_012020287v1 54010 45 + 4899514 CAGAAAC-CGGCTTCTGCCCAAATCTCCATCTGCAGCCCCTTCTCT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 54314 45 + 97742 CAGAAAC-TGGCTTCTGCCCAAATCTCCATCTGCAGCCCCTTCTCT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3704661 45 - 108555830 CAGAAAC-TGGCTTCTGCCCAAATCTCCATCTGCAGCCCTTTCTCT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 54349 45 + 85016 CAGAAAC-TGGCTTCTGCCCAAATCTCCATCTGCAGCCCCTTCTCT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1033310 45 - 1267912 CAGAAAC-TGGCTTCTGCCCAAATCTCCATCTGCAGCCCCTTCTCT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46480255 45 - 47448759 CAGGAAC-TGGCTTCTGCCCAAATCTCCATCTGCAGCCTTTTCTCT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 21806 45 + 8899380 CAGAAAC-TGGCTTCTTCCCAAATCTCCATCTGCAGCCCTTTCTCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4412234 45 + 4432243 CAGAAAC-TGGCTTCTGCCCAAATCTCCATTTGCAGCCCTTTCTCT i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19651456 45 - 27850971 CATAATC-TGACTTCTGTCCAACTCTCTCTGTTTAGTCCTTTCCCC i otoGar3.GL873538 I 20804 I 5 s canFam3.chr2 79104110 46 - 85426708 cataatcttgacttctgcctaactctccatcttttgccctttatac i canFam3.chr2 C 0 I 1 s dasNov3.JH570393 1728014 42 - 2296528 catga---tgtctcctgcctaactcttcatctttagccttcttct- i dasNov3.JH570393 C 0 C 0 a score=67436.000000 s hg38.chr3_KI270784v1_alt 166853 6 + 184404 GTCTGC s panTro5.chr3 59736 6 - 202621043 GTCTGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 54661 6 - 205426864 GTCTGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 73147 6 + 508821 GTCTGC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 210360 6 - 123690457 GTCTGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 39251 6 - 85730 CTCTGC i rheMac8.chrUn_NW_014858614v1 C 0 M 100 s macFas5.chr15 1449828 6 - 112612857 GTCTGC i macFas5.chr15 N 0 C 0 s macNem1.NW_012020287v1 54055 6 + 4899514 CTCTGC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 54359 6 + 97742 CTCTGC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3704706 6 - 108555830 GTCTGC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 54394 6 + 85016 CTCTGC i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1033355 6 - 1267912 GTCTGC i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46480300 5 - 47448759 GTCTG- i calJac3.chr18 C 0 I 1 s saiBol1.JH378197 21851 6 + 8899380 GTCTGC i saiBol1.JH378197 C 0 I 1 s cebCap1.NW_016107581v1 4412279 6 + 4432243 GTCTGC i cebCap1.NW_016107581v1 C 0 I 7 s otoGar3.GL873538 19651506 6 - 27850971 GTCTGC i otoGar3.GL873538 I 5 C 0 s canFam3.chr2 79104157 6 - 85426708 gtctgc i canFam3.chr2 I 1 C 0 s dasNov3.JH570393 1728056 6 - 2296528 gtctgc i dasNov3.JH570393 C 0 C 0 a score=1604211.000000 s hg38.chr3_KI270784v1_alt 166859 215 + 184404 TCTTTTTT-CTGGCATTACTGAGCTGCTGGTAATGCCCCC--------ATCACC-ATCCCTCTCATGTAGAAAA----ATATAC----TCTGGGAAGCTTCTCTCCCTC-TCTTGCCGCTGCCTGGCATGTGCTACC--TTTCCTGCCCTCTGCCTCCTTT-AATCTGGTAAGCCTCTCTGTCTAAGTCTCAG------CTCAGGCATGGTCTCTAGAAAAGCCATCCCCGATGGCTTTTATT s panTro5.chr3 59742 216 - 202621043 TCTTTTTTTCTGGCATTACTGAGCTGCTGGTAATGCCCCC--------ATCACC-ATCCCTCTCATGTAGACAA----ATATAC----CCTGGGAAGCTTCTCTCCCTC-TCTTGCCGCTGCCTGGCATGTGCTACC--TTTCCTGCCCTCTGCCTCCTTT-AATCTGGTGAGCCTCTCTGTCTAAGTCTCAG------CTCAGGCGTGGTCTCTAGAAAAGCCATCCCCGATGGCTTTTATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 54667 215 - 205426864 TCTTTTTT-CTGGCATTACTGAGCTGCTGGTAATGCCCCC--------ATCACC-ATCCCTCTCATGTAGACAA----ATATAC----CCTGGGAAGCTTCTCTCCCTC-TCTTGCCGCTGCCTGGCATGTGCTACC--TTTCCTGCCCTCTGCCTCCTTT-AATCTGGTGAGCCTCTCTGTCTAAGTCTCAG------CTCAGGCGTGGTCTCTAGAAAAGCCATCCCCGATGGCTTTTATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 73153 215 + 508821 TCTTTTTT-CTGGCATTACTGAGCTGCTGGTAATGCCCCC--------ATCACC-ATCCCTCTCATGTAGACAA----ATATAC----TCTGGGAGGCTTCTCTCCCTC-TCTTGCTGCTGCCTGGCATGTTCTACC--TTTCCTGCCCTCTGCCTCCTTT-AATCTGTTGAGCCTCTCTGTCTAAGTCTCAG------CTCAGGCATGGTCTCTAGAAAAGCCATCCCCGATGGCTTTTATT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 210366 137 - 123690457 TCTTTTTT-CTGGCATTACTGAGCTGCTGGTAATGCCTCC--------ATCACC-ATCCCTCTCATGTAGACAA----ATACGC----TCTGGGAGGCTCCTCTGCCTC-TCTTGCGGCTGCCTGCCATGTGCTACC--TTTCCT-------------------------------------------------------------------------------------GATGGCTTTTATT i nomLeu3.chr11 C 0 C 0 s macFas5.chr15 1449834 219 - 112612857 CTCTTTTT-CTGGCATTACTGAGCTGCTGGTGATGCCCCC--------GTCACC-GTCCCTCTCATGTAGACAA----ATACATACAGTCTGGGAGGCTTCTCTCCCTc-tcttgccactgcctggcatgtactatc--tttcctgccctctgcctctttt-aatctggtgaacctcactgtctaagtctcag------tccaggcatgttttctccaaaagccattcctgacAGCttttatt i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 54061 213 + 4899514 CCTTTTTT-CTGGCATTACTGAGCTGCTGGTAATGCCCCT--------GTCACC-AT--CTCTCATGTAGACAA----ATACGC----TCTGGGAGGCTTCTCTCCCTC-TCTTGCCACTGCCTGGCATGCGCTACC--TTTCCTGCCCTCTGCCTGCTTT-AATCTGGTGAACCTCACTGTCTAAGTCTCAG------CTCAGGCACGATCTCTAGAAAGGCCATCCCCGATGACTTTTATT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 54365 213 + 97742 CCTTTTTT-CTGGCATTACTGAGCTGCTGGTAATGCCCCT--------GTCACC-AT--CTCTCATGTAGACAA----ATACGC----TCTCGGAGACTTCTCTCCCTC-TCGTGCCACGGCCTGGCATGCGCTACC--TTTCCTGCCCTCTGCCTGCTTT-AATCTGGTGAACCTCGCTGTCTAAGTCTCAG------CTTAGGCACGATCTCTAGAAAGGCCATCCCCGATGACTTTTATT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3704712 219 - 108555830 CTCTTTTT-CTGGCATTACTGAGCTGCTGCTGATGCCCCC--------ATCACC-ATCCCTCTCATGTAGACAAATACATACAC----TCTGGGAGGCTTCTCTCCCTC-TCTTGCCACTGCCTGGCATGTACTATC--TTTCCTGCCCTCTGCCTCTTTT-AATCTGGTGAACCTCACTGTCTCAGTCTCAG------CCCATGCATGATCTTTAGAAAAACCATCCCTAACAGCttttatt i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 54400 213 + 85016 CCTTTTTT-CTGGCATTACTGAGCTGCTGGTAATGCCCCT--------GTCACC-AT--CTCTCATGTAGACAA----ATACGC----TCTGGGAGGCTTCTCTCCCTC-TCTTGCCACTGCCTGGCATGCGCTACC--TTTCCTGCCCTCTGCCTGCTTT-AATCTGGTGAACCTCGCTGTCTAAGTCTCAG------CTTAGGCACGATCTCTAGAAAGGCCATCCCCGATGACGTTTATT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1033361 215 - 1267912 CCTTTTTT-CTGGCATTACTGAGCTGCTGGTGATGCCCCT--------GTCACC-ATCCCTCTCATGTAGACAA----ATACGC----TCTGGGAGGCTTCTCTCCCTC-TCTTGCCACTGCCTGGCATGCGCTACC--TTTCCTGTCCTCTGCCTGCTTT-AATCTGGTGAACCTCACTGTCTAAGTCTCAG------CTCAGGCAGGATCTCTAGAAAAGCCATCCCCGATGACTTTTATT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46480306 225 - 47448759 TCTTTTAT-CTGGCATTACTGAGCTTCTGGTAATGCCTTC--------GTCACC-ATCCCACTGATGCAGACAAATACATACGC----TCTGGGAGACTTCTCTCCCTc-tcttgccactgcctggcattcgctacc--tttcctgccctctgcttctttt-aatctggtgaacctcactctctaagtctcagctcagactcaggtgtgatctctagcaaagctatctccgacGGCTTTTATT i calJac3.chr18 I 1 C 0 s saiBol1.JH378197 21858 210 + 8899380 TTTTTTTT-TTCCCATTATTGAGCTACTGGTAATGCCCCC--------ATCACC-ATCCCTCTCATGTAGACAAATACATATGC----TCTGGGAGGCTTCTtttcctc-tcttgccaatg---------cactacc--tttcctaccttctgcctctttt-aatctggtgtacttcatgctctaagtctcag------ctcaggtgtgatctgtagaaaagctatccctgacAAGttttgtt i saiBol1.JH378197 I 1 I 330 s cebCap1.NW_016107581v1 4412292 226 + 4432243 TTTTTTTT-CTGGCATTACTGAGCTTCTGGTAATACCCCTCACGATAGACAACC-ATCCCTCAC-TGTAGACAAATGCATAAGC----TCTGGGAGGCTTCTTTTCCTc-tcttgccactgcctggcatgcgctacc--tttcctgccctttgcctctttt-aatctggtgaacttcactctctaagtctcag------cttgggcatgatacctagaaaagctatccctgacAAgttttatt i cebCap1.NW_016107581v1 I 7 C 0 s otoGar3.GL873538 19651512 209 - 27850971 CCTTTTCT-CTGGCATCACTGAACTACTGCTGATGTCCTC--------CTCACCTGTCTCTGTATTTTAGACCAATACGTATAG----CATTTCATGCTTCTCTTCTTC-TCTTGCTGCCACCTTG----------C--TTTCCTGTCCTCTACCCCTTTT-AATCTGGCTGACCTCACTCCTTAAGTCTCAG------CTTAGGCATTGTCTCTAGAACAGCTGG-TCTGACAGCTCTTATT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79104163 223 - 85426708 ccttatct-ctgacATC-CTGAACTGCTAGTGATGTTTTC--------CTCTTTGATCCCTGTATTTTAGGCAAATGTTTACCC----TGTTGTGTGCTTCTCTCCCTTGTCTTACTACAGCCTTGCATGCTCTCCCCATTTTCTGCCCTCTAATCCCTTTGAATCTGTCTGATGTCACTGTTGCAGTCTCAG------TTTAGGCATTATCTCTAAAAAAGCTATTCCTGACACCTTATATA i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1728062 214 - 2296528 cattttct-ctggcatcactgaattcctggttCAACCTCC---------TCACCAATCCCTCCCTTTTAGACATATATCCACTC----TCT-GGATGATGCTTTCTCTG-TGTTGC------CTTGGATGTCCTCACACCTTCCTGCTTTCTATCTTCTTT-AATCCAGCTAGCCCTCCTCTTTAAGTCGCAG------TCCAGACATCATCTCTAGAAAAGCCATCTGTAATACCTTTTATC i dasNov3.JH570393 C 0 C 0 e rheMac8.chrUn_NW_014858614v1 39257 100 - 85730 M a score=47299.000000 s hg38.chr3_KI270784v1_alt 167074 10 + 184404 ----------------------CCCGTTATTG------- s panTro5.chr3 59958 10 - 202621043 ----------------------CCCGTTATGT------- i panTro5.chr3 C 0 C 0 s panPan2.chr3 54882 10 - 205426864 ----------------------CCCGTTATGT------- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 73368 10 + 508821 ----------------------CCCGTTCTTT------- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 210503 10 - 123690457 ----------------------CCCATTCTTT------- i nomLeu3.chr11 C 0 C 0 s macFas5.chr15 1450053 10 - 112612857 ----------------------ctcattcttt------- i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 54274 10 + 4899514 ----------------------CCCATTCTTT------- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 54578 10 + 97742 ----------------------CCCATTCTTT------- i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3704931 10 - 108555830 ----------------------ctcattcttt------- i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 54613 10 + 85016 ----------------------CCCATTCTTT------- i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1033576 10 - 1267912 ----------------------CCCATTCTTT------- i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46480531 10 - 47448759 ----------------------TCCGTTCTTT------- i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 22398 10 + 8899380 ----------------------CCCATTCCTT------- i saiBol1.JH378197 I 330 C 0 s cebCap1.NW_016107581v1 4412518 10 + 4432243 ----------------------cccattctct------- i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19651721 10 - 27850971 ----------------------TACTTTCTTA------- i otoGar3.GL873538 C 0 I 4 s canFam3.chr2 79104386 10 - 85426708 ----------------------TACATGCTTT------- i canFam3.chr2 C 0 I 3 s dasNov3.JH570393 1728276 39 - 2296528 TGGACTCCCCACCAgatggttccttactcttccttaatt i dasNov3.JH570393 C 0 C 0 e rheMac8.chrUn_NW_014858614v1 39257 100 - 85730 M a score=559970.000000 s hg38.chr3_KI270784v1_alt 167084 56 + 184404 AAACCCCAGTGCCTACCACTTAGCAGGAACTCCATGAAT-ATCT----AGTAAA--------ATCAAGA s panTro5.chr3 59968 56 - 202621043 AAACCCCAGTGCCTACCACTTAGCAGGAACTCCAGGAAT-ATCT----AGTAAA--------ATCAAGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 54892 56 - 205426864 AAACCCCAGTGCCTACCACTTAGCAGGAACTCCAGGAAT-ATCT----AGTAAA--------ATCAAGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 73378 56 + 508821 AAACCCCAGTGCCTACCAGTTAGCAGGAACTCCATGAAT-ATCT----AGTAAA--------AGCAAGA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 210513 56 - 123690457 AAACCCCAGTGCCTACCACTTAGCAGGAACTCCATGAAT-ATTT----ATGAAA--------ATAAAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 39361 56 - 85730 AAACCCCAGTGCTTACCACTTAGCAAGAACTCCATAAAC-ATTT----AGTAAA--------ATAAAGA i rheMac8.chrUn_NW_014858614v1 M 100 C 0 s macFas5.chr15 1450063 56 - 112612857 aaaccccagtgcctaccacttagcaggaactcaataaat-attt----agtaaa--------ataaaGA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 54284 56 + 4899514 AAACCCCAGTGCTTACCACTTAGCAAGAACTCCATAAAC-ATTT----AGTAAA--------ATAAAGA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 54588 56 + 97742 AAACCCCAGTGCTTACCACTTAGCAAGAACTCCATAAAC-ATTT----AGTAAA--------ATAAAGA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3704941 56 - 108555830 aaaccccagtgcctaccacttagcaggaactcaataaac-attt----agtaaa--------ataaaGA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 54623 56 + 85016 AAACCCCAGTGCTTACCACTTAGCAAGAACTCCATAAAC-ATTT----AGTAAA--------ATAAAGA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1033586 56 - 1267912 AAACCCCAGTGCCTACCACTTAGCAGGAACTCCATAAAC-ATTT----AGTAAA--------ATAAAGA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46480541 56 - 47448759 AAACTCCAGTGTTTACCACTCAGCAGGAACTCAATACAT-CTTT----AGTAAA--------ATAAAGG i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 22408 56 + 8899380 AAACCCcagtgcctagcacttagcaggaacttaacaaat-attt----tgtaaa--------ataaaGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4412528 56 + 4432243 aaaccccagtgcctaccacttagcaggaactcaataaat-attt----agtaaa--------ataaaGA i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19651735 57 - 27850971 AAATCCCAGTGCCTAGCTCTTAGCAGAACCTAAGtaaataattg----aataaa--------aaaatga i otoGar3.GL873538 I 4 I 226 s canFam3.chr2 79104399 60 - 85426708 AAATCTGGTACCCTAGCACTTAGTGGGAACTCCGTAAAT-AATTACTAAGTAAC--------ATAAAGA i canFam3.chr2 I 3 C 0 s dasNov3.JH570393 1728315 64 - 2296528 aagccctggtgaccagtatatagtaggaactcaataaat-aatt----gttgaataaaATACATAAAGA i dasNov3.JH570393 C 0 C 0 a score=706448.000000 s hg38.chr3_KI270784v1_alt 167140 89 + 184404 CTGTTTATACGAAGATGATT--------------gctac-----------------------------------------------------------------agtctagcagcaaaggggatagacatgcaaagacatgatgtgcagttc--agatggtggagtgaca s panTro5.chr3 60024 89 - 202621043 CTGTTTATACGAAGATGATT--------------gctac-----------------------------------------------------------------agtctagcagcaaaggggatagacatgcaaagacatgatgtgcagttc--agatggtggagtgaca i panTro5.chr3 C 0 C 0 s panPan2.chr3 54948 89 - 205426864 CTGTTTATACGAAGATGATT--------------gctac-----------------------------------------------------------------agtctagcagcaaaggggatagacatgcaaagacatgatgtgcagttc--agatggtggagtgaca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 73434 89 + 508821 CTGTTTATATGAAGATGATT--------------GCTAC-----------------------------------------------------------------AGTCTAGCAGCAAAGGGGATAGACATGCAAAGACATGATGTGCAGTTC--AGATGGTGGAGTGACA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 210569 87 - 123690457 C--TTTATACGAAGATGATT--------------GCTAC-----------------------------------------------------------------AGTCTAGCAGCAAAGAGGATAGACATGCAAAGACATGATGTGCAGTTC--AGATGTTGGAGTGACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 39417 89 - 85730 CTGTTTATAAGAAGAAGATT--------------CCTTC-----------------------------------------------------------------AGTCTAGCAGCAAGGGGGATAGACATGGAAAGACATGATGCACAGTTC--AGATGGCGGAGTGACA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1450119 89 - 112612857 CTGTTTATACAAAGATGACT--------------gctac-----------------------------------------------------------------agtctggcaacaaaggggatagacatgcaaagacatgatgtgcagttc--agatggtgaagtgaca i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 54340 154 + 4899514 CTGTTTATAAGAAGAAGATT--------------CCTTCAGTCTAGCAGCAAGGGGGATAGACGTGGAAAGACATGATGCACAGTTCAGATGGCGGAGTGATTCAGTCTAGCAGCAAGGGGGATAGACGTGGAAAGACATGATGCACAGTTC--AGATGGCGGAGTGACA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 54644 89 + 97742 CTGTTTATAAGAAGAAGATT--------------CCTTC-----------------------------------------------------------------AGTCTAGCAGCAAGGGGGATAGACATGGAAAGACATGATGCACAGTTC--AGATGGCGGAGTGACC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3704997 87 - 108555830 C--TTTATACAAAGATGACT--------------GCTAC-----------------------------------------------------------------AGTCTGGCAACAAAGGGGATAGACGTGCAAAAACATGATGTGCAGTTC--AGATGGTGAAGTGACA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 54679 89 + 85016 CTGTTTATAAGAAGAAGATT--------------CCTTC-----------------------------------------------------------------AGTCTAGCAGCAAGGGGGATAGACGTGGAAAGACATGATGCACAGTTC--AGATGGCGGAGTGACC i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1033642 89 - 1267912 CTGTTTATAAGAAGAAGATT--------------GCTAC-----------------------------------------------------------------AGTCTAGCAGCAAAGGGGATAAGCATGGAAAGACATGATGCGCAGTTC--AGATGGCGGAGTGACA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46480597 91 - 47448759 CTGTTTATAGAAAGATGATT--------------gctac-----------------------------------------------------------------agtctagcagcaaagaggatagacacgtaaagacataatgtgcagctcataggtggtggagtgaca i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 22464 86 + 8899380 CTGTTTATGCAAAGATGATT--------------GCTAC-----------------------------------------------------------------AGTCTAGCAGCAAAGAGGATAGACATGCAAAGAC---ATGTACAGCTC--AGATGGTCAAGTGACA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4412584 89 + 4432243 CTGTTTATACAAAGATGATT--------------GCTAC-----------------------------------------------------------------AGTCTAGCAGCAAAGAGGATAGACATGCAAAGACATGATGTGCAGTTT--AGATGGTGAAGTGACA i cebCap1.NW_016107581v1 C 0 C 0 s canFam3.chr2 79104459 73 - 85426708 CTGTTTACACAAAGATGATT---------------TAAG-----------------------------------------------------------------AGAATGTCCCCTACAgggac------------acctggt---tggttc--agttggttgagcgtcc i canFam3.chr2 C 0 I 294 s dasNov3.JH570393 1728379 100 - 2296528 CTACTTATATAAAAATGACTTAAGGTACTGCCCCCCAAC-----------------------------------------------------------------AATCTAGGAGCAAAGAGGAGAGA--TGTAAAAAAATAAT-TATATTCG--GGGTAGTAAAGATACA i dasNov3.JH570393 C 0 C 0 e otoGar3.GL873538 19651792 226 - 27850971 I a score=843668.000000 s hg38.chr3_KI270784v1_alt 167229 108 + 184404 ctagaa-aa--cttgacaaagtactaagggagccccaaggaaggagacgcctgtgtacgtggagaaatacagccagattcaaggaggacttcacatagcattctgagtcat s panTro5.chr3 60113 108 - 202621043 ctagaa-aa--cttgacaacgtactaagggagccccaaggaaggagacgcctgtgtacgtggagaaagatagccagattcaaggaggacttcacatagcattctgagtcat i panTro5.chr3 C 0 C 0 s panPan2.chr3 55037 108 - 205426864 ctagaa-aa--cttgacaacgtactaagggagccccaaggaaggagacgcctgtgtacgtggagaaagatagccagattcaaggaggacttcacatagcattctgagtcat i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 73523 108 + 508821 CTAGAA-AA--CTTGACAAAGTACTAAGGGAGCCCCAAGGAAGGAGACGCCTGTGTATGTGGAGAAAGAGAGCCAGATTCAAGGAGGACTTCACATAGCATTCTGAGTCAT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 210656 108 - 123690457 CTAGAA-AA--CTTGACAAAGTACTGAGGGAGCCCCAAGGAAGGAGACGCCTGTGTATGTGGAGAAAGATAGCCAGATTCAAGGAGGACTTCACACAGCATTCTGAGTCAt i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 39506 106 - 85730 CTAGAA-AA--C--AACAAAGTACTAAGAGGTCCCCAAGGAAGGAGACACCTGTATATGTGCAGAAAGATAGCCGGATTCAAGGAGGACTTCACATAGCATTCTGAGCCtt i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1450208 100 - 112612857 ctagaa-aa--atggacaaagtactaagggagccccaaggaaggAGA-GCCTGTGTATGTGGAGAA----AGCCAGATTCAAGGAGGACTTCACATAGCATTTTGAGC--- i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 54494 106 + 4899514 CTAGAA-AA--C--AACAAAGTACTAAGAGGTCCCCAAGGAAGGAGACACCTGTATATGTGCAGAAAGATAGCCGGATTCAAGGAGGACTTCACATAGCATTCTGAGCCTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 54733 106 + 97742 CTAGAA-AA--C--GACAAAGTACTAAGAGGTCCCCAAGGAAGGAGACACCTGTATATGTGCAGAAAGATAGCCGGATTCAAGGAGGACTTCACATAGCATTGTGAGCCtt i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3705084 107 - 108555830 CTAGAA-AAATG--GACAAAGTACTAAGGGAGACCCAAGGACGGAGA-GCCTGTGTATGTGGAGAAAGATAGCCAGATTCAAGGAGGACTTCACATAGCATTTTGAGCCtt i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 54768 106 + 85016 CTAGAA-AA--T--GACAAAGTACTAAGAGGTCCCCAAGGAAGGAGACATCTGTATATGTGCAAACAGATAGCCGGATTCAAGGAGGACTTCACATAGCATTCTGAGCCtt i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1033731 106 - 1267912 CTAGAA-AA--C--GACAAAGTACTAAGAGGGCCCCAAGGAAGGAGACACCTGTGTATGTGCAAAAAGATAGCCGGATTCAAGGAGGACTTCACATAGCATTCTGAGCCtt i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46480688 108 - 47448759 ctagaa-aa--attgacaatgtacgaagggagcccgaaggaaggagacacctGTGTATGTGGACAAAGACAGCCAGATTTGAGGAGGACTTGACATAGCATTCTGAGCCtt i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 22550 108 + 8899380 CTAGAC-AA--ATTGGCAAAGTACTAAGGGATCCCCAAGGAAGGAGACACCTGTGTATGTGGATAAAAATATCCAGATTAAAAGAGCACTCCACATAGCATTCTGAAACTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4412673 108 + 4432243 CTAGAAGAA--ATTGACAAAGTACTAAGGGATCCCCAAGGAA-GAAACATCTGTGTACGTGAAGAAATGTAGCCAGATTCAAAGAGGACTTCACATAGCATTCTGAACCtt i cebCap1.NW_016107581v1 C 0 C 0 s dasNov3.JH570393 1728479 103 - 2296528 CTAGGA-AA--TC-TATAAAGTACTAAGGTAGCACCAAGGAAAGAAACAATT---TATCTGGA-AAAGATAGTTACAATTCAGGAAGACTTCAGGTAACAGGCTGGATCTT i dasNov3.JH570393 C 0 I 56 e canFam3.chr2 79104532 294 - 85426708 I e otoGar3.GL873538 19651792 226 - 27850971 I a score=2002403.000000 s hg38.chr3_KI270784v1_alt 167337 261 + 184404 tttttctttttt-------ctttttctgtttttagaaacaagttcttactctgtcacccagggtggagtgcaatggcatgatcgagattcactgcaaactcaaactcctgggcttaagggatcctctcacctcaaccttttgagtagctgggactacaggcacacacca------------------------------------------------------------------------------------------------ccatgcgtggcaaattttctgtagagtcagg------gcttcactatggtctccaggctgctcttaaactcttggcttggagcagttctcc-ttcctgggccttcc s panTro5.chr3 60221 261 - 202621043 tttttctttttt-------ctttttctgtttttcgcaacaagttcttactctgtcacccagggtggagtgcaatggcatgatcgagattcactgcaaactcaaactcctgggcttaagggatcctctcacctcaaccttttgagtagctgggactacaggcacacacca------------------------------------------------------------------------------------------------ccatgcgtggcaaattttctgtagagtcagg------gcttcactatggtctccaggctgctcttaaactcttggcttggagcagttctcc-ttcctgggccttcc i panTro5.chr3 C 0 C 0 s panPan2.chr3 55145 261 - 205426864 tttttctttttt-------ctttttctgtttttcgcaacaagttcttactctgtcacccagggtggagtgcaatggcatgatcgagattcactgcaaactcaaactcctgggcttaagggatcctctcacctcaaccttttgagtagctgggactacaggcacacacca------------------------------------------------------------------------------------------------ccatgcgtggcaaattttctgtaaagtcagg------gcttcactatggtctccaggctgctcttaaactcttggcttggagcagttctcc-ttcctgggccttcc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 73631 261 + 508821 Gttttctttttt-------ctttttctgtttttagaaacaagttcttactctgtcacccagggtggagtgcaatggcatgatcgagattcactgcaaactcaaactcctgggcttaagggatcctctcacctcaacctcttgagtagctgggactacaggcacacacca------------------------------------------------------------------------------------------------ccatgcctggcaaattttctgtagagtcagg------gcttcactatggtctccaggctgctcttaaactcttggcttggagcaattctcc-ttcctgggccttcc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 210764 261 - 123690457 tttttctttttt-------ctttttctgtttttggaaacaagttcttactctgtcacccagggtggagtgcaatggcatgatcgagactcactgcaaactcacactcctgggcttaagggatcctctcacctcaacctcttgagtagctgggactacaggcacacacca------------------------------------------------------------------------------------------------ccacgcctggcaaattttcggtagagtcagg------gcttcactgtggtctccaggctgctcttaaactcttggcttggagcagttctcc-ttcctgggccttcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 39612 262 - 85730 tttttctttttt-------ctttttccgtttttggaaacaagttcttactctgtcacccagggtggagtgcaatggcatgattgagactcactgcaaactcaaactcccggtcttgagggatcctctcgcctcagcctcttcagtagctgggactacaggcacacaccg------------------------------------------------------------------------------------------------ccacgcccggcacagtttctgtggagtccgg------gtttctctgtggtctccagactgctcttaaactcctggcttcgagcaggtctcctctcctaggccttcc i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1450308 256 - 112612857 -----Ctttttt-------ctttttctgtttttggaaacaagttcttaatctgtcacccagggtggactgcaatggcatgatcgagactcactgcaaactgaagctcctgggcttaagggatcctcttgcctcaaattcttgaatagctggtactacaggcacacacca------------------------------------------------------------------------------------------------ccatgtctggcaaattttctatagagtcagg------atttcactatggtctccaggctggtcttaaactccttgctttaagcagttatcc-cacctgggccttcc i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 54600 337 + 4899514 TTTTTCTttttt-------ctttttccgtttttggaaacaagttcttactctgtcacccagggtggagtgcaatggcatgattgagactcactgcaaactcaaactcccggtcttgagggatcctctggcctcagcctcttcagtagctgggactacaggcacacaccaccacgcccggcacagtttctgtggagtccgg----gtttctctgtggtctc-----------------caggctgcgggactacaggcacacactgccatgcctggcaaagttgctgtagagtcagg------gtttctctgtggtctccagactgctcttaaactcctgggttcgagcaggtctcctctcctaggccttcc i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 54839 261 + 97742 tttttctttttt-------ctttttccgtttttggaaacaagttcttactctgtcacccagggtggagtgcaatggcatgatcgagactcactgcaaactcaaactcccggtcttgagggatcctctcacctcagcctcttcagtagctgggactacaggcacacacca------------------------------------------------------------------------------------------------ccacgcccggcagagtttctgtggagtccgg------gtttctctgtggtctccagactgctcttaaactcctggcttcgagcaggtctcc-ctcctaggccttcc i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3705191 261 - 108555830 tttttctttttt-------atttttttgtttttggaaacaagttcttactgtgtcatccagggtagagtgcaatggcatgatcgagactcactgcaaactgaaactcctgggcttaagggatcctcttgcctcaacctcttgagtagctgggactacaggcacacacca------------------------------------------------------------------------------------------------ccatgcctggcaaattttctatagagtcagg------gtttcactatggtctccagactggtcttaaactcctggctttaagcagttatcc-cacctggaccttcc i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 54874 261 + 85016 tttttctttttt-------ctttttccgtttttggaaacaagttcttactctgtcacccagggtggagtgcaatggcatgatcgagactcactgcaaactcaaactcccggtcttgagggatcctctcacctcagcctcttcagtagctgggactacaggcacacacca------------------------------------------------------------------------------------------------ccacgcctggcagagtttctgtggagtccgg------gtttctctgtggtctccagactgctcttaaactcctggcttcgagcaggtctcc-ctcctaggccttcc i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1033837 330 - 1267912 tttttct-------------tttttccgtttttggaaacaagttcttactctgtcacccagggttgagtgcaatggcatgatcgagactcactgcaaactcaaactcccggtcttaagggatcctctcgcctcagcctcttaagtagctgggactacaggcacacacca---------------------caaagcccggcagagtttctgtggagtcccggtttctctgtggtttccgggctgcgggaccacaggctcacaccaccatgcctggcaaagttgctgtagagtcagg------gtttctctgtggtctccagactgctcttaaactcctggcttcgagcggttgtcc-ctcctaggccttcc i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46480796 252 - 47448759 ttt----------------ctttttctgtttttggagacagggtcttactctgtcaccaagggtggcatgcaatagcgtgatcgaggctcactg------caaattcctgggcttaagcaatcctctcacctcacccttttgagtagctgggactacaggcacacacca------------------------------------------------------------------------------------------------ccatgcatggcaaatttcctgtcgagtcagggaaactgactcactataatctccaggcttgtcttaaagtctcaacctcaagtaattcttc-ctcctgggccttcc i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 22658 267 + 8899380 TTTTTCCTTTTTTTAAAAAttttttctgtttttggaaa-aagttcttaccctgtcacccagggtggagtgcaatagcatgatccagagtcactgcaaactcaaactcctgggcttaagggagcctctcacctcaacctcttgagtagctggcactacaggcccacacca------------------------------------------------------------------------------------------------ccatgcctgacaaattttctttagagtcaag------gtttcactgtggtctccagactggtcttaaactcttggctttgagcaattctct-ctcttgggcctttc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4412781 261 + 4432243 tttttctttttt-------ctttttctgtttttggaaacaaattcttactctgtcacccaagatggagtgcaatggcatgattgagagtcactgcaaactcaaactcctgggcttaggggagcctctctcctcaacctcttgagtagctgggactacacgcccacacca------------------------------------------------------------------------------------------------ccatgcctggcaaatattctgtagagtcaag------gtttcactatggtctctaggctggtcttaaactcctggctttgagcaattctcc-ctcttgggccttcc i cebCap1.NW_016107581v1 C 0 C 0 e canFam3.chr2 79104532 294 - 85426708 I e dasNov3.JH570393 1728582 56 - 2296528 I e otoGar3.GL873538 19651792 226 - 27850971 I a score=226403.000000 s hg38.chr3_KI270784v1_alt 167598 27 + 184404 aaagtgctgagattacaggtgtgagct s panTro5.chr3 60482 27 - 202621043 aaagtgctgagattacaggtgtgagct i panTro5.chr3 C 0 C 0 s panPan2.chr3 55406 27 - 205426864 aaagtgctgagattacaggtgtgagct i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 73892 27 + 508821 aaagtgctgggattacaggtgtgagct i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 211025 27 - 123690457 gaagtgctgggattacaggtgtgagct i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 39874 27 - 85730 atagtgctgggattacaggtgtgagct i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1450564 27 - 112612857 aaagtgctgggataacaggtgtgagct i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 54937 27 + 4899514 atagtgctgggattacaggtgtgagct i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 55100 27 + 97742 atagtgctgggattacaggtgtgagct i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3705452 27 - 108555830 aaagtgatgggattacaggtgtgagct i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 55135 27 + 85016 atagtgctgggattacaggtgtgagct i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1034167 27 - 1267912 atagtgctgggattacaggtgtgagct i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46481048 27 - 47448759 aaagtgctgggattacaggcgtgagct i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 22925 27 + 8899380 aaagtgctgggattacaattctgatct i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4413042 27 + 4432243 aacatgctgggattacaggtgtgatct i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19652018 18 - 27850971 AAAGAGCCAGAATCAAAG--------- i otoGar3.GL873538 I 226 C 0 e canFam3.chr2 79104532 294 - 85426708 I e dasNov3.JH570393 1728582 56 - 2296528 I a score=564967.000000 s hg38.chr3_KI270784v1_alt 167625 64 + 184404 actgtgcccagcctacattcagagtcttaaaacac-gaaaataaatttgtcagaatagtagagga s panTro5.chr3 60509 64 - 202621043 actgtgcccagcctacattcagagtcttgaaacac-gaaaataaatttgtcagaatagtagagga i panTro5.chr3 C 0 C 0 s panPan2.chr3 55433 64 - 205426864 actgtgcccagcctacattcagagtcttgaaacac-gaaaataaatttgtcagaatagtagagga i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 73919 64 + 508821 actgtgcccagccTACATTCAGAGTCTTAAAACAC-AAAAATAAATTTGTCAGAATAGTAGAGGA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 211052 64 - 123690457 actgtgcccagccTACATTCAGAGTCTTAGAACAC-GAAAATAAATTTGTCAGAATGGTAGAGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 39901 63 - 85730 actgtgcccagccTACATTCAGAGTCTTAAAACAC-GA-AATAAATTTGTCAGAATAGTAGAGGA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1450591 64 - 112612857 actgtgcccagccTACATTCTGAGTCTGAAAACAC-AACAATAAATTTGTCAGAATAGTAGAAGG i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 54964 63 + 4899514 actgtgcccagccTACATTCAGAGTCTTAAAACAC-GA-AATAAATTTGTCAGAATAGTAGAGGA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 55127 63 + 97742 actgtgcccagccTACATTCAGAGTCTTAAAACAC-GA-AATAAATTTGTCAGAATAGTAGAGGA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3705479 64 - 108555830 actgtgcccagccTACATTCTGAGTCTTATAACACAAA-AATACATTTATCAGAATAGTAGAGGA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 55162 63 + 85016 actgtgcccagccTATATTCAGAGTCTTAAAACAC-GA-AATAAATTTGTCAGAATAGTAGAGGA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1034194 63 - 1267912 actgtgcccagccTACATTCAGAGTCTTAAAACAC-GA-AATAAATTTGTCAGAATAGTAGAGGA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46481075 64 - 47448759 actattcccaaccTACATTCGGAGTCTTCAATAAT-GAAAATAAATATGTTAGAATAGTAGAGGA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 22952 64 + 8899380 actgtgccaagccTACATTCAGAGTCTTAAAACAC-AAATACAAATTTGTCAGAATAGTAGAGGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4413069 62 + 4432243 actgtgcccagccTGCATTC--AGTCTTACAACAC-AAAAATTAATTTGTCAGAATAGTAGAGAA i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19652036 58 - 27850971 -----ACTCATATAGCAGTCTGAGTCTTAAAAGTT-GG-AAAGAAGTTGTCAGAATAATGGAGAA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79104826 59 - 85426708 ACTTTACATAG----CAGTCTTAGTCCTAAAAGAT-GCAAATAAATTTGCTA-AGTAGTAGAGGA i canFam3.chr2 I 294 C 0 e dasNov3.JH570393 1728582 56 - 2296528 I a score=697131.000000 s hg38.chr3_KI270784v1_alt 167689 77 + 184404 aaacatttca------------------gatgtaaa-----aatcaggatatacaCTAATAAAGGTAT-AATGGTAAC-AA-AATTTTGCAAATTATTAGTAA s panTro5.chr3 60573 77 - 202621043 aaacatttca------------------gatgtaaa-----aatcaggatatacaCTAATAAAGGTAT-AATGGTAAC-AA-AATTTTGCAAATTATTAGTAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 55497 77 - 205426864 aaacatttca------------------gatgtaaa-----aatcaggatatacaCTAATAAAGGTAT-AATGGTAAC-AA-AATTTTGCAAATTATTAGTAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 73983 77 + 508821 AAACATTTCA------------------GATGTAAA-----AATCAGGATATACACTAATAAAGGTAT-AATGGTAAC-AA-AATTTTGCAAATTATTAGTAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 211116 77 - 123690457 AGACATTTCA------------------GATGTAAA-----AATCAGGATATACACGAATAAAGGTAT-AATGACAAC-AA-AATTTTGCAAATTATTAGTAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 39964 77 - 85730 AGACATTTCA------------------AATGTAAA-----AATCAGGATATACACTAATAAAGGTAT-AATGGTAAC-AA-AATTTTGCAAATTATTAGTAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1450655 77 - 112612857 AAATATTTCA------------------GATGTAAA-----AAACAGGGTGTACACT-ATAAAGGTAT-AACGGTAACAAA-AATTTTGCAAATTATTAGTAA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 55027 77 + 4899514 AAACATTTCA------------------AATGTAAA-----AATCAGGATATACACTAATAAAGGTAT-AATGGTAAC-AA-AATTTTGCAAATTATTAGTAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 55190 77 + 97742 AAACATTTCA------------------AATGTAAA-----AATCAGGATATACACTAATAAAGGTAT-AATGGTAAC-AA-AATTTTGCAAATTATTAGTAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3705543 75 - 108555830 AAACATTTCA------------------GATGTAAA-----AAAC--GGTGTACATT-ATAAAGGTGT-AACAGTAACAAA-AATTTTGCAAATTATTAGTAA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 55225 77 + 85016 AAACATTTCA------------------AATGTAAA-----AATCAGGATATACACTAATAAAGGTAT-AATGGTAAC-AA-AATTTTGCAAATTATTAGTAA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1034257 77 - 1267912 AAACATTTCA------------------GATGTAAA-----AATCAGGATATACACTACTAAAGGTAT-AATGGCAAC-AA-AATTTTGCAAATTATTAGTAA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46481139 78 - 47448759 AAAAATTTCA------------------GAATTTAA-----AAACAGGGTGTATCCTAATAAAGATATAAATGGTAAC-AATAATTTTGAAAA-TATTGGTAA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 23016 78 + 8899380 AAACATTTCA------------------GATGTGAA-----AAGCAGAATGGACGCCAATAAAGATAT-AACGGTAAC-AAAATTTTTACAAATTATTGGTAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4413131 77 + 4432243 AAACACTTCA------------------GATGTAAA-----AAACAGGATGTACACTAATAAAGGTGT-AACAGTAAC-AA-AACTTTGCAAATCATTGGTAA i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19652094 79 - 27850971 AAACATTTCA------------------GATGTAAA-----GAGTAGAATGTACACTGATAAAGGTATAAATGGTAGC-AGTTCATTTGCAAAGCATTAATGA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79104885 102 - 85426708 AAACATTTCATAATGTTTGCTCCTCAGGGACATACACCCATAGGGACAAGGTACACTAATAAAGGCATGAAAAGTACT-AGTAATTTTGGAAATGATGAATAA i canFam3.chr2 C 0 I 14 s dasNov3.JH570393 1728638 75 - 2296528 AAACACTTCA------------------GATTCAGG-----GAT--AGGTATACGCTGATAGAGGTA--AAAAGTAAC-AGTACTTTTGGAAACCACAAATAA i dasNov3.JH570393 I 56 I 1 a score=29804.000000 s hg38.chr3_KI270784v1_alt 167766 11 + 184404 ---ATAACAACTCA s panTro5.chr3 60650 11 - 202621043 ---ATAACAACTCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 55574 11 - 205426864 ---ATAACAACTCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 74060 11 + 508821 ---ATAACAACTCA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 211193 11 - 123690457 ---ATAACAACTCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 40041 8 - 85730 ---AT---AACTCA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1450732 11 - 112612857 ---ATAACAACTCG i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 55104 8 + 4899514 ---AT---AACTCA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 55267 8 + 97742 ---AT---AACTCA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3705618 7 - 108555830 ---AT---AAC-AA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 55302 8 + 85016 ---AT---AACTCA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1034334 8 - 1267912 ---AT---AACTCA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46481217 11 - 47448759 ---ATACCAACTAG i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 23094 8 + 8899380 ---AT---AATTCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4413208 11 + 4432243 ---ATAACAACTCG i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19652173 8 - 27850971 ---AC---AGCATG i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1728714 11 - 2296528 GTTGT---AGTTGA i dasNov3.JH570393 I 1 I 2 e canFam3.chr2 79104987 14 - 85426708 I a score=934747.000000 s hg38.chr3_KI270784v1_alt 167777 103 + 184404 CTTAGCATGTTGTTGAAAAGA-TACTATTATGAAGTAGAGAA-----TAAAGTATT---ACTTTATATGTTTTTACTATATTTTTAAATTTTACTTTGTTTCCAGCAGTTTT s panTro5.chr3 60661 103 - 202621043 CTTAGCATGTTGTTGAAAAGA-TACTATTATGAAGTAGAGAA-----TAAAGTATT---ACTTTCTATGTTTTTACTATATTTTTAAATTTTACTTTGTTTCCAGCAGTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 55585 103 - 205426864 CTTAGCATGTTGTTGAAAAGA-TACTATTATGAAGTAGAGAA-----TAAAGTATT---ACTTTATATGTTTTTACTATATTTTTAAATTTTACTTTGTTTCCAGCAGTTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 74071 103 + 508821 CTTAGCATGTTGTTGAAAAGA-TACTATTATGAAGTAGAGAA-----TAAAGTATT---ACTTTATATGTTTTTAATATATTTTTAAATTTTACTTTGTTTCCAGCAGTTTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 211204 103 - 123690457 CTTAACATGTTGTTGAAAAGA-TACTATTATGAAGTAGAGAA-----TAAAGTATT---ACTTTATATGTTTTTACTGTATTTTTAAATTTTACTTTATTTCCAGCAGTTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 40049 103 - 85730 CTTAGCATGTTGTTGAAAAGA-TACTATTATGAAGTAGAGAA-----TAAAGTATT---ACTTTATATGTTTTTACTGTATTTTTAAATTTTGCTTTGTTTCCAGCAGTTTT i rheMac8.chrUn_NW_014858614v1 C 0 I 1633 s macFas5.chr15 1450743 106 - 112612857 CTTAGCATGCTGTTAAACAGA-TACTATTATGAAGTAGAGAATAG--TAAAGTGTA---ACTTAATATGTTTTCACTGTATTTTTAAATTTTGTTTTGTTTCCATCACTTTT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 55112 100 + 4899514 CTTAGCATGTTGTTGAAAAGA-TGCTATTATGAAGTAGAGAA-----TAAAGTATT---ACTTTATATGTTTTTACTGTATTTTTAAATTTTGCTTTGTTTCCAGCAGT--- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 55275 103 + 97742 CTTAGCATGTTGTTGAAAAGA-TACTATTATGAAGTAGAGTA-----TAAAGTATT---ACTTTATATGTTTTTACTGTATTTTTAAATTTTGCTTTGTTTCCAGCAGTTTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3705625 103 - 108555830 CTTAGCATGTTGTTAAAAAGA-TACTATTATGAAGTAGAGAATAG--TAAAGTGTT---ACTTTATATGTTTTCACTGTATTTTTAAATTTTGTTTTGTTTCCAGCAGT--- i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 55310 103 + 85016 CTTAGCATGTTGTTGAAAAGA-TACTATTATGAAGTAGAGAA-----TAAAGTATT---ACTTTATATGTTTTTACTGTATTTTTAAATTTTGCTTTGTTTCCAGCAGTTTT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1034342 103 - 1267912 CTTAGCATGTTGTTGAAAAGA-TACTATTATGAAGTAGAGAA-----GAAAGTATT---ACTTTATATGTTTTTACTGTATTTTTAAATTTTGCTTTGTTTCCAGCAGTTTT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46481228 103 - 47448759 CTTAACATGTTGTTCAGAAGATAATTATTATGAAGTAGAGAATAG--TAAAATGTT--AACTTTATATGTTTTCACTGTA-TTTTAAACT----TTTGTTTCCAGCAGATTT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 23102 103 + 8899380 CTTAGCATGTTGTTAAAAAATACACTATTAGGAAGTAGAGAATAG--TGAAGTGTT---ACTTTATATGTTTTCACTGTATTTTTAAATT----TTTCTTTCCAGCAGTTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4413219 90 + 4432243 CTTAGCGTGTGGTTAAAGA---CACTATCATGAAGTAAGAAATAG--TGAAGTATT---ACTTTATATGTTTTCACTGTATTTTTAAAAT----TTT----------GTTTT i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19652181 89 - 27850971 CTTAGCCTGTTGTTAAAAAGG-TATTGTTATGAAGTAGAGAACAGTATACAGTATT---ACTTCATATGTTTCTACTATATTTTAAGGTTTCT------------------- i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79105001 102 - 85426708 CTTAGGGTGTT----AAGAGT-TACTGTTACAAAGTAGAAAA-----TAATCTCTTGTGATTTTATATGTTTCTACTGTATTTTAAATTTTTGTTTTCTTTCTGATTGTTTT i canFam3.chr2 I 14 C 0 s dasNov3.JH570393 1728727 100 - 2296528 CTTAGAGTGTTGTTAAAGA-A-TACTTTCATGAAGTGGAGAATAGT-TACAGTGTG---CTTTTATATGTTTCTACCATATTTTT------TATTTTGTTTTTGATTGTTTT i dasNov3.JH570393 I 2 I 1 a score=31685.000000 s hg38.chr3_KI270784v1_alt 167880 4 + 184404 GCTT s panTro5.chr3 60764 4 - 202621043 GCTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 55688 4 - 205426864 GCTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 74174 4 + 508821 GCTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 211307 4 - 123690457 GTTT i nomLeu3.chr11 C 0 C 0 s macFas5.chr15 1450849 4 - 112612857 GTTT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 55212 3 + 4899514 -TTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 55378 4 + 97742 GTTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3705728 3 - 108555830 -TTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 55413 4 + 85016 GTTT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1034445 4 - 1267912 GTTT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46481331 4 - 47448759 GTTT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 23205 4 + 8899380 GTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4413309 4 + 4432243 GTTT i cebCap1.NW_016107581v1 C 0 C 0 s canFam3.chr2 79105103 4 - 85426708 ATTC i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1728828 4 - 2296528 GTTT i dasNov3.JH570393 I 1 C 0 e otoGar3.GL873538 19652270 0 - 27850971 C e rheMac8.chrUn_NW_014858614v1 40152 1633 - 85730 I a score=4717076.000000 s hg38.chr3_KI270784v1_alt 167884 505 + 184404 ATTTATTTT-GCGTGGAATAATTTGTGGGTGACCCT--GAGACTTTTGCATGGCTTGAACCTGCTGATATCTAGTGTCTCCTTAAGTGG------------TTTGTTGAGGTTTTAGATAATTAGAAGTATTTCTTTAAAATGTAAATATTCCAGTAAACATTAAGCTTCATTTAAACTCTCCATTTATAAAATAAAAGTATATGTTATTTTGTATCCATTTTTATAAAGATTATAGTCTTTATCTAAGTGTTCTAAGTCATTCATTTTAACTAAACATATGGATTTGTCTGCAGAACACGACTTAAAAGTGGCTTCAGAGGAAAAGCAAGAAACGCTTGAAAGAAGTGAAAATAAACAGCCAGAGGTATGTAACAATT------TAAATTTCTGGTTTAATA--------TTGGTTGGTTGGTTTTTCTTTAATAACACAGCATAGTCCAAAAGAAGTGACCTTT-TAGACTGTCCTTTTAGAATCCAACAGACAGATCATAATTTCTTACTTAA-TTTTAA-AACATTTTAGCCA s panTro5.chr3 60768 501 - 202621043 ATTTATTTT-GCGTGGAATAATTGGTGGGTGACCCT--GAGACTTTTGCATGGCTTGAACCTGCTGATATCTAGTGTCTCCTTAAGTGG------------TTTGTTGAGGTTTTAGATAATTAGAAGTATTTCTTTAAAATGTAAATATTCCAGTAAACATTAAGCTTCATTTAAACTCTCCATTTATAAAATAAAAGTATATGTTATTTTGTATCCATTTTTATAAAGATTATAGTCTTTA----AGTGTTCTAAGTCATTCATTTTAACTAAACATATGGATTTGTCTGCAGAACACGACTTAAAAGTGGCTTCAGAGGAAAAGCAAGAAACGCTTGAAAGAAGTGAAAATAAACAGCCAGAGGTATGTAACAATT------TAAATTTCTGGTTTAATA--------TTGGTTGGTTGGTTTTTCTTTAATAACACAGCATAGTCCAAAAGAAGTGACCTTT-TAGACTATCCTTTTAGAATCCAACAGACAGATCATAATTTCTTACTTAA-TTTTAA-AACATTTTAGCCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 55692 505 - 205426864 ATTTATTTT-GCGTGGAATAATTTGTGGGTGACCCT--GAGACTTTTGCATGGCTTGAACCTGCTGATATCTAGTGTCTCCTTAAGTGA------------TTTGTTGAGGTTTTAGATAATTAGAAGTATTTCTTTAAAATGTAAATATTCCAGTAAACATTAAGCTTCATTTAAACTCTCCATTTATAAAATAAAAGTATATGTTATTTTGTATCCATTTTTATAAAGATTATAGTCTTTATCTAAGTGTTCTAAGTCATTCATTTTAACTAAACATATGGATTTGTCTGCAGAACACGACTTAAAAGTGGCTTCAGAGGAAAAGCAAGAAACGCTTGAAAGAAGTGAAAATAAACAGCCAGAGGTATGTAACAATT------TAAATTTCTGGTTTAATA--------TTGGTTGGTTGGTTTTTCTTTAATAACACAGCATAGTCCAAAAGAAGTGACCTTT-TAGACTATCCTTTTAGAATCCAACAGACAGATCATAATTTCTTACTTAA-TTTTAA-AACATTTTAGCCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 74178 513 + 508821 ATTTATTTT-GCGTGGAATAATTTGTGGGTGACCCT--GAGACTTTTGCATGGCTTGGACCTGCTGATATCTAGTGTCTCCTTAAGTGG------------TTTGTTGAGGTTTTAGATAATTAGAAGTATTTCTTTAAAATGTAAATATTCCAGTAAACATTAAGCTTCATTTAAACTCTCCATTTATAAAATAAAAGTATATGTTATTTTGTATCCATTTTTATAAAGATTATAGTCTTTATCTAAGTGTTCTAAGTCATTCATTTTAACTAAACATATGGATTTGTCTGCAGAACACGACTTAAAAGTGGCTTCAGAGGAAAAGCAAGAAACGCTTGAAAGAAGTGAAAATAAAGAGCCAGAGGTATGTAACAATT------TAAATTTCTGGTTTAATAttggttggttggttggttggttTTTCTTTAATAACACAGCATAGTCCAAAAGAAGTGACCTTT-TAGACTATCCTTTTAGAATCCAACAGACAGATCATAATTTCTTACTTAA-TTTTAA-AACATTTTAGCCA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 211311 508 - 123690457 ATTTATGTT-GGGTGGAATAATTTGTGGGTGACCCT--GAGACTTTTGCATACCTTGAACCTGCTGATATCTAGTGTCTCCCTAAGTGG------------CTTGTTGAGGTTTTAGATAATTAGAAGTATTTCTTTAAAATGTAAATATTCCAGTAAACATTAAGCTTCATTTAAACTCTCCATTTATAAAATAAAAGTATATGTTATTTTGTATCCATTTTT-TAAAGATTATAGTCTTTA----AGTGTTCTAAGTCATTCATTTTAACTAAACATATGGATTTGTCTGCAGAACACGACTTAAAAGTGGCTTCAGAGGAAAAGCAAGAAACGCTTGAAAGAAGTGAAAATAAACAGCCAGAGGTATGTAACAATT------TTAACTTCTGGTTTAATATGGGTTGGTTGGTTGGTTGGTGTTTCTTTAATAACATAGCATAGTCCAAAAGAAGTGACCTTT-TAGACTATCCTTTTAGAATCCAACAGACAGATCATAATTTCATATTTAA-TTTTAA-AACATTTTAGCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 41785 501 - 85730 ATTTATGTT-GGGTGGAATAATTTGTGGGTGACCCT--GAGACTTTTGCATGGCTTGAACCTGCTGATATCTAGTGTCTCCCCAAGTGG------------TTTGTTGAAGTTTTAGATAATTAGAAGTATTTCTTAAAAATATAAATATTCCAGTAAACATTAAGCTTCATTTAAACTCTCCATTTATGAAATAAAAGTATATGTTGTTTTATATCCATTTTTATAAAGATTATAGTCTTTA----ACTGTTCTAAGTCATTCATCTTAACTCAACATATGGATTTGTCAGCAGAACACGTCTTAAAAGTGGCTTCAGAGCAAAACCAAGAAATGCTTGAAAGAAGTGAAAGTAAACAGCCACAGGTATGTAGCAATT------TAAATTCCTGGTTTGCTA----TTGGTTGGTTAGTTGGTTTTTCTTTAATAACATAGCATAGTCCAAATGAAGTGACCTTT-TAAACTATCCTTTTAGAATCCA----ACAGATCGTAATTTCATATTTAA-TTTTAA-AACATTTTAGCCA i rheMac8.chrUn_NW_014858614v1 I 1633 C 0 s macFas5.chr15 1450853 488 - 112612857 ACTTATGTTAAGGTGGAATAATTTGTGGCTGACACT--GAGACTTTTGCGTGGCTTGAACCTGCTGATATCTAGTGTCTCCCCAAGTGG------------GTTGTTAAAGTTTCAGATAATTAGAAGTGTTTCTTAAAAATGTAAATATTCCAGTAAACATAAAGCTTCATTTAAACTCTCAATATA-GAAAGCAAAGTATATGTTATTTTGTATCAATTTTT-TAAG-----------TTA----ACTGTTCTAAGTCATTCATTTTCACTAAACATATGGATTTGTCAGCAGAACACAACTTAAAAGTCATTTCAGAGGAAAAGCAAGAAAGACTTGAAAGAAGTGAAAATAAACAGCCACAGGTAGATAACAATT------TAAATTTCTGGTTTAATA----TTGGTTTGTCTGCTTGTTTTTCTTTAATACCATGGCATAGTCCAAATGAAGTGACCTTT-TAGACTATCCTTTTAGAATCCA----ACAGAGCATAATTTCATATTGAA-TTTTAA-AACATTTTAGCC- i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 55215 501 + 4899514 ATTTATGTT-GGGTGGAATAATTTGTGGGTGACCCT--GAGACTTTTGCATGGCTTGAACCTGCTGATATCAAGTGTCTCCCCAAGTGG------------TTTGTTGAAGTTTTAGATAATTAGAAGTATTTCTTAAAAATATAAATATTCCAGTAAACATTAAGCTTCATTTAAACTCTCCATTTATGGAATAAAAGTATATGTTGTTTTATATCCATTTTTATAAAGATTATAGTCTTTA----ACTGTTCTAAGTCATTCATCTTAACTCAACATATGGATTTGTCAGCAGAACACGTCTTAAAAGTGGCTTCAGAGGAAAACCAAGAAATGCTTGAAAGAAGTGAAAGTAAACAGCCACAGGTGTGTAGCAATT------TAAATTCCTGGTTTGCTA----TTGGTTGGTTAGTTGGTTTTTCTTTAATAACATAGCATAGTCCAAATGAAGTGACCTTT-TAAACTATCCTTTTAGAATCCA----ACAGATCGTAATTTCATATTTAA-TTTTAA-AACATTTTAGCCA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 55382 501 + 97742 ATTTATGTT-GGGTGGAATAATTTGTGGGTGACCCT--GAGACTTTTGCATGGCTTGAACCTGCTGATATCTAGTGTCTCCCCAAGTGG------------TTTGTTGAAGTTTTAGATAATTAGAAGTATTTCTTAAAAATGTAAATATTCCAGTAAACATTAAGCTTCATTTAAACTCTCCATTTATGAAATAAAAGTATATGTTGTTTTATATCCATTTTTATAAAGATTATAGTCTTTA----ACTGTTCTAAGTCATTCATCTTAACTCAACATATGGATTTGTCAGCAGAACACGACTTAAAAGTGGCTTCAGAGGAAAACCAAGAAATGCTTGAAAGAAGTGAAAGTAAACAGCCACAGGTATGTAGCAATT------TAAATTCCTGGTTTGCTA----TTGGTTGGTTAGTTGGTTTTTCTTTAATAACACAGCATAGTCCAAATGAAGTGACCTTT-TAAACTATCCTTTTAGAATCCA----ACAGATCATAATTTCATATTTAA-TTTTAA-AACATTTTAGCCA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3705731 494 - 108555830 ATTTACATT-GGGTGGAATAATTTGTGGGTGACCCT--GAGACTTTTGCATGTCTTGAACCTGCTGATATCTAGTGTCTCCCCAAGGGG------------TTTGTTAAAGTTTTAGATAATTAGAAGTGCTTCTTAAAAATGTAAATATTCCAGTAAACATTTAGCTTCATTTAAACTCTCAATTTATAAAACAAAAG--TATGTTATTTTGTATCCATTTTTATAAAGATTATAGTCTTTA--------TTCTAAG-CATTCATTTTAACTGAACATATGGATTTGTCAGCAGAACACAACTTAAAAGTGGCTTCAGAGGAAAAGCAAGAAAGGCTTGAAAGAAGTGGAAATAAACAGCCACAGGTATATAACAATT------TAAATTTCTGGTTTACTA----ttggtttgtttgtttgtttgtttTTAATACCATAGCATAGTCCAAATGAAGTGACCTTA-CAGGCTATCCTTTTAGAATCCA----ACAGAGCGTAATTTCATATTGAA-TTTTAA-AACATTTTAGCCA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 55417 501 + 85016 ATTTATGTT-GGGTGGAATAATTTGTGGGTGACCCT--GAGACTTTTGCATGGCTTGAACCTGCTGATATCTAGTGTCTCCCCAAGTGG------------TTTGTTGAAGTTTTAGATAATTAGAAGTATTTCTTAAAAATGTAAATATTCCAGTAAACATTAAGCTTCATTTAAACTCTCCATTTATGAAATAAAAGTATATGTTGTTTTATATCCATTTTTATAAAGATTATAGTCTTTA----ACTGTTCTAAGTCATTCATCTTAACTCAACATATGGATTTGTCAGCAGAACACGACTTAAAAGTGGCTTCAGAGGAAAACCAAGAAATGCTTGAAAGAAGTGAAAGTAAACAGCCACAGGTATGTAGCAATT------TAAATTCCTGGTTTGCTA----TTGGTTGGTTAGTTGGTTTTTCTTTAATAACATAGCATAGTCCAAATGAAGTGACCTTT-TAAACTATCCTTTTAGAATCCA----ACAGATCATAATTTCATATTTAA-TTTTAA-AACATTTTAGCCA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1034449 494 - 1267912 GTTTATGTT-GTGTGGAATAATTTGTGGGTGACCCT--GAGACTTT----TGGCTTGAACCTGCTGATATCTAGTGTCTCCCCAAGTGG------------TTTGTTGGAGTTTTAGATAATTAAAAGTATTTCTTAAAAATGTAAATATTCCAGTAAACATTAAGCTTCATTTAAACTCTCAATTTATAAAATAA---TACGTGTTATTTTCCATTTATTTGTATAATGACTTTAGCCTTTATCTAACTCTTCTACGTAGTTCATTTTAACTAACTATATGGATTTGTCAGCAGAACACGACTTAAAAGTGGCTTCAGAGGAAGACCAAGAAATACTTGAAAGAAGTGA----AAACAGCCACAGGTATGTAGCAATT------TAAATTTCTGGTTTACTA----TTGGTTGGTTAGTTGGTTTTTCTTTAATAATATAGCATAGTCCAAATGAAGTGACCTTT-TAGACTATCCTTTTAGAATCCA----ACAGATCGTAATTTCATATTTAA-TTTTAA-AACATTTTAGCCA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46481335 473 - 47448759 ATTTATGTT-GGGTGGAACAATTTGTGGGTGACCCT--AAGATTTTTGCATGACTCGAACCTGCTGATATCTAGTGTCTCTTCAAGT-G------------TTTGTTGAAGTTTTAAAGAATTAGAAGTGTTACTTAAAGATATAAATACTCCAGTAAACATTAAGCTTCATGTAAACTCCCAATTTATAAAA-----GTATATGCTATTATATATCCATTTTTATAAAAGTTATAGAGCTTA----ACTATTCTAAGTCATTCATTTTAACTAAACATATGGATTTTTCAGTAGAACATGACTTAAAAGTGGCTTCAGAGGAAACAAAAGAAAGGTTCAAGAGAAGTGAAAATATACAGCCACAGGTACATAACaatt------taaattta----------------aatttttttattta----------ataaGATAACATAGTCCAAATGAAGTGACATTT-TTGACTATCCTTTTAGAATCCA----ACAGATCATAATTTCATATTTAA-TTTGAA-AACATTTTAATCA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 23209 498 + 8899380 ATTTATATT-GAGTGGAATAATTTGTGGGTGACCCT--GAGATTTTTGCATGGCTCGAACCTGCTGATATCTAGTGTCTCCCCAAGTGG------------TTTGTTGAAGTTTTAGATAATTAGAAGTATTTCTTAAAAAGTTAAATATTATAGTAAACATTAAGCTTCATTTAAACTCTCAATTTCTAAAATAAATGTATATG---TTTTGTATCCAATTTTCTAAAGATTATAGTCTTTA----ACTGTTCTAAATCATTCATTTAAACTCAATATATTTATTTGTTAGCAGAACATGACTTAAAAGTGGCTTCAGAGGAAAGGCAAGAAAGTCTTGAAAGAAGTGAAAACCAACAGCCACAGGTATAAAACTATT------TAAATTTCTGGTTTAATA----TTGGTTTGTTTGTTTATTTTTTTAAGATAACATACCATAGTCCAAATGAAGTGACCTTT-TAGACCATCCTTTTAAAGTTCA----ACAGATCATAATTTCGTATTTAA-TTTTAA-AACACTTCAGCCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4413313 492 + 4432243 ATTTATATT-GGGTGGAATAATTTGTGGGTGACCCT--GAGATTTTTACATGCCTTGAAACTGCTAATATCTGGTGTCTTCCCAAGTGG------------TTTGTTGAAGTTTTAAATAATTAGAAGTATTTGTTTAAAATGTAAATATTCTAGTAAACATTAAGCTTCATTTAAACTCTGAATTT-TAAAATAAAAGTATATGTTATTTTGTATCCATTTTTATAAAGGTTATAG------------TCTTCTAAGTAATTCATTTTAGCTAAATATATGGATTTGTCAGCAGAACACAATTTAAAAGTGACTTCAGAGAAAAAGCAAGAAAGGCTTGAAAAAAGTGAAAATAAACAGCCACAGGTATAAAACTATT------TAAATTTCTGGTTTAATA----TTGGTTTGTTTGTTTGCTTTTTTAAGATAACATACCATAGTCCAAAAGGAGTGACCTTT-TAGACTATCCTTTTAGAGTTCA----ACAGATCATAATTTCATATTTAA-TTTTAA-AATATTTTAGCCA i cebCap1.NW_016107581v1 C 0 I 1 s otoGar3.GL873538 19652270 433 - 27850971 ---------------------TTTCTGG---------------------------------TGGTGATGTCTTGTGTCTCCCCAAGTGG------------TTTGTTGACTTTTTGGATGATTAGAAGTATTTCTTAAAGAAGGAAATATTTCACTTAAGATTAAGCTTCATTTAAACTCTCAATTTATAAAATAA------ATGTCAATTTTTAT----TTTTATGATAACTATGGCTTTCATCTAACTGTTCT--GTCATTCACTTTAACTCAAAATATGGATTTGTCAGCAGAACATGACTTAGAAGTTACATCAGAGGAAGAGCAAGAAAGTCTTGAAGGAAGGGAAAATAACCAGCCACAGGTATGGAAAAATTTAAATATAAATTGCTGTTTTAATT-------------TTGTTTTCTTTACATTAAGAACGTTGCATAGTCCAAATGAAATTGCCTTTCCCCACTAACCATTTTGAAT-CA----TTAGATCataattt-------aa-tttaaataatattttaacta i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79105107 477 - 85426708 ATTGATGTT-AAGTGGATGAATTTCTGAATGAATCTTGGAGATGTTTGTGTGCCTTTAACCTGGTGACATTTAGTAT-TTCTCAAATGG------------TTTGTTGAAATTTTAGATAATTAGAAGTATTTCTTAAA---GTAAACTTTCAACTAAAGATTA------ATTTAAACTCTTAATTGATAAAATA----------TTATTTTCTAT----TTTTATAGAGG-TAAAACTTTTATCTAACCATTCTAAGTAGCCTGTTTTAATTAAATCTATAGATTTGTCAGCAGAACTAGATTTAGAAGTGGCATCAGAGGAAGAGCAAGAAAGACCCGATGAAAGTGAAAATAACCACCCACAGGTATGtaaaaatttaaatttaaatttCTGATTTTATA-------------TTGTTTTCCCTGCTTTACTAATGTAACATGGTTCAAGTGAAATTATCTTT---GAGCAGACATATTGAAATCA----ACatattataatttaatatttag-ttttaa-taaaaCTTTACAA i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1728832 490 - 2296528 AATTATGTT-GGATGGATGAATTCGTGAATGAATCTTTAAGCTGTTTATATTTCTTGAACCTGGTGACATCTAG--TCTTTCCAAGTGGACTATTGAACCATTTGCTGAAGTTTTGGATAAT---------TTCTTAAAGAAATAAATACTCAGCTAAAGATTAACCTTAATTTAAATTCTCAGT---TGTAATA-------ATGTTATTTTGTTT--ATTTTTGTAAAGATGGTATCTTTTATCTAACTGTTCTAAGTAGTTTATTTTAACTAAATATATAGATATGTCAGCAGAACTAGACTTAAAAATGATATCAGAGGAAGAGCAAGAAAGGCTTGACGGAAGTGAAAATAACCAGCCACAGGTATGTAAAAATTTAAATTTAAGTTTCTGGTATAATA----TTGTTT----------CCATGTTTTAAAAAC-TAGC-TAATCCAAATGAAATTATATTT-TGGACTAGACTATTAAAATCTA-----TAGATCataatttaatatttaatttttGA-AACATTTTAACAA i dasNov3.JH570393 C 0 C 0 a score=2675.000000 s hg38.chr3_KI270784v1_alt 168389 1 + 184404 -G s panTro5.chr3 61269 1 - 202621043 -G i panTro5.chr3 C 0 C 0 s panPan2.chr3 56197 1 - 205426864 -G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 74691 1 + 508821 -G i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 211819 1 - 123690457 -G i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 42286 1 - 85730 -G i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1451341 1 - 112612857 -G i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 55716 1 + 4899514 -G i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 55883 1 + 97742 -G i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3706225 1 - 108555830 -G i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 55918 1 + 85016 -G i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1034943 1 - 1267912 -G i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46481808 1 - 47448759 -G i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 23707 1 + 8899380 -A i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19652703 1 - 27850971 -g i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79105584 1 - 85426708 -G i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1729322 1 - 2296528 C- i dasNov3.JH570393 C 0 C 0 e cebCap1.NW_016107581v1 4413805 1 + 4432243 I a score=379830.000000 s hg38.chr3_KI270784v1_alt 168390 44 + 184404 TTATAAAATTTAAAATATCCTTACAGTCTGCAGTAACTCATAGC s panTro5.chr3 61270 44 - 202621043 TTATAAAATTTAAAATATCCTTACAGTCTGCAGTAACTCATAGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 56198 44 - 205426864 TTATAAAATTTAAAATATCCTTACAGTCTGCAGTAACTCATAGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 74692 44 + 508821 TTATAAAATTTAAAATATCCTTACAGTCTGCAGTAACTCATAGC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 211820 44 - 123690457 TTATAAAATTTAAAATATCCTTACAGTCTGCAGTAACTCATAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 42287 44 - 85730 TTATAAAATTTAAAATATTCTTAAAGTCTGTAGTAACTCATAGC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1451342 44 - 112612857 TTATAAAATTTGAAATATTCTTACCATCTGTAGTAACTCATAGC i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 55717 44 + 4899514 TTATAAAATTTAAAATATTCTTAAAGTCTGTAGTAACTCATAGC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 55884 44 + 97742 TTATAAAATGTAAAATATTCTTACAGTCTGTAGTAACTCATAGC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3706226 44 - 108555830 TTATAAAATTTAAAATATTCTTACAGTCTGTAGTAACTCATAGC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 55919 44 + 85016 TTATAAAATGTAAAATATTCTTACAGTCTGTAGTAACTCATAGC i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1034944 44 - 1267912 TTATAAAATTTAAAATATTCTTATAGTCTGTAGTAACTCATAGC i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46481809 44 - 47448759 TTATAAAATCTGAAATATTCTTTCAGTCTGTAGTAACTCATAGC i calJac3.chr18 C 0 C 0 s otoGar3.GL873538 19652704 44 - 27850971 ttataaaagttaaaatattCTTAGAATACATTGTTATTTATAGC i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79105585 44 - 85426708 TTACAAAACTTAAAATATTGTTGTAATTTTTAGTAACGGTTACC i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1729323 44 - 2296528 TTATAAACCTTAAAATATTCCTAGAATCTTTAGCAGCTTATAGC i dasNov3.JH570393 C 0 M 830 e cebCap1.NW_016107581v1 4413805 1 + 4432243 I e saiBol1.JH378197 23708 0 + 8899380 C a score=1645442.000000 s hg38.chr3_KI270784v1_alt 168434 231 + 184404 T-ATCTGTACCCTTGGAATTGAGGC---------------------CAGAAATTTCCAGAAGTCTCTTTGC-----------------TCTTTTACTTTTATAAGCTTCTT-CATGACAAAGAAAGTAACATCAAAAATTGAGTTGTA----TTACTAAGCAAGAGAAATTATGAACAATTTAACAGTGATGGCCACTGAGTTCAACTCGTGTTAAAGGAGTCATCGTTGCTAGTGGTTCAGAC--TCTG-CAG---TTTTATGTTGCTGGTCA-CCAGTGC s panTro5.chr3 61314 231 - 202621043 T-ATCTGTACCCTTGGAATTGAGGC---------------------CAGAAATTTCCAGAAGTCTCTTTGC-----------------TCTTTTACTTTTATAAGCTTCTT-CATGATAAAGAAAGTAACATCAAAAATTGAGTTGTA----TTACTAAGCAAGAGAAATTATGAACAATTTAACAGTGATGGCCACTGAGTTCAACTCGTGTTAAAGGAGTCATTGTTGCTAGTGGTTCAAAC--TCTG-CAG---TTTTATGTTGCTGGTCA-CCAGTGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 56242 231 - 205426864 T-ATCTGTACCCTTGGAATTGAGGC---------------------CAGAAATTTCCAGAAGTCTCTTTGC-----------------TCTTTTACTTTTATAAGCTTCTT-CATGATAAAGAAAGTAACATCAAAAATTGAGTTGTA----TTACTAAGCAAGAGAAATTATGAACAATTTAACAGTGATGGCCACTGAGTTCAACTCGTGTTAAAGGAGTCATTGTTGCTAGTGGTTCAAAC--TCTG-CAG---TTTTATGTTGCTGGTCA-CCAGTGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 74736 231 + 508821 T-ATCTGTACCCTTGGAATTGAGGC---------------------CAGAAATTTCCAGAAGTCTCTTTGC-----------------TCTTTTACTTTTATAAGCTTCTT-CATGATAAAGAAAGTAACATCAAAAATTGAGTTGTA----TTACTAAGCAAGAGAAATTATGAACAATTTAACAGTGATGGCCACTGAGTTCAACTCGTGTTAAAGGAGTCATCGTTGCTAGTGGTTCAAAC--TCTG-CAG---TTTTATGTTGCCAGTCA-CCAGTGC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 211864 231 - 123690457 T-ATCTGTACCCTTGGAATTGAGGC---------------------CAGAAATTTCCAGAAGTCTCTTTGC-----------------TCTTTTATTTTTATAACCTTCTT-CATGATAAAGAAAGTGACATCAAAAATTGAGTTATA----TTACTAAGCAAGAGAAATTATGAACAATTTAACAGTGATGGCCACTGAGTTCAACTCATGTTAAAGGAGTCATCATTGCCCGTGGTTCAGAC--TCTG-CAG---TTTTATGTTGCTGGTCA-CCAGTGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 42331 231 - 85730 T-ATCTGTACCCTTGGACTTGAGGC---------------------CAGAAATTTCCAGAAGTCTCTTTGC-----------------TCTTTTATTTTTATAACCTTCCT-CACGATAAAGAAAGTAACATCAAAAATGGAGTTGTA----TTACTAAGCTAGAGAAATTATGAACAATTGGACAGTGATGGCCACTGAGTTCAACTCCTGTTAAAGGAGGCATCATTCCCAGTGGTTCAAAC--TTTG-CAG---TTTTATGTTGCCGGTCA-CCAGTGC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1451386 232 - 112612857 T-ATCTGTACCTTTGGAATTGAGAC---------------------CAGAAATTTCCAGAACTCTCTTTGC-----------------TCTTTCATTTTTATAACCTTCTT-CATGATAAAGAAGGTAACATCAGAAATGGAGCTGTATTACTTACTAAGCAAGAGAAATTATGAATAATTGGACAGTGACAGCCCCTGAGTTCACCTCATGTTAAAGGAG---TGGTTCCCAGTGGTTCGAAC--TTTG-CAG---TTTTATGTTGCTGGTCA-CCAGTGC i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 55761 231 + 4899514 T-ATCTGTACCCTTGGACTTGAGGC---------------------CAGAAATTTCCAGAAGTCTCTTTGC-----------------TCTTTTATTTTTATAACCTTCCT-CACGATAAAGAAAGTAACATCAAAAATGGAGTTGTA----TTACTAAGCTAGAGAAATTATGAACAATTGGACAGTGATGGCCACTGAGTTCAACTCCTGTTAAAGGAGGCATCATTCCCAGTGGTTCAAAC--TTTG-CAG---TTTTATGTTGCCGGTCA-CCAGTGC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 55928 231 + 97742 T-ATCTGTACCCTTGGACTTGAGGC---------------------CAGAAATTTCCAGAAGTCTCCTTGC-----------------TCTTTTATTTTTATAACCTTCCT-CACGATAAAGAAAGTAACATCAAAAATGGAGTTGTA----TTACTAAGCTAGAGAAATTATGAACAATTGGACAGTGATGGCCACTGAGTTCAACTCCTGTTAAAGGAGGCATCATTCCCAGTGGTTCAAAC--TTTG-CAG---TTTTATGTTGCCGGTCA-CCAGTGC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3706270 231 - 108555830 T-ATCTGTACCCTTGGACTTGAGGC---------------------CAGAAATTTCCAGAAGTCGCTTTGC-----------------TCTTTTATTTTTATAACCTTCTT-CATGATAAAGAGGGTAACATCAGAAATGGAGTTGTA----TTACTAAGCAAGAGAAATTATGAACAATTGGACAGTGATGGCCACTGAGTTCAACTCCTGTTAAAGGAGGCATCATTCCCAGTGGTTCAAAC--TTTG-CAG---TTTTATGTTGCTGGTCA-CCAGTGC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 55963 231 + 85016 T-ATCTGTACCCTTGGACTTGAGGC---------------------CAGAAATTTCCAGAAGTCTCCTTGC-----------------TCTTTTATTTTTATAACCTTCCT-CACAATAAAGAAAGTAACATCAAAAATGGAGTTGTA----TTACTAAGCTAGAGAAATTATGAACAATTGGATAGTGATGGCCACTGAGTTCAACTCCTGTTAAAGGTGGCATCATTCCCAGTGGTTCAAAC--TTTG-CAG---TTTTATGTTGCCGGTCA-CCAGTGC i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1034988 250 - 1267912 T-ATCTGTACCCTTGAACCTGAGGC---------------------CAGAAATTTCCAGAAGTCTCTTTGCTCttttattttattttatcttttatttttatAACCTTCTT-CACGATAAAGTAAGTAACATCAAAAATGGAGTTGTA----TTACTAAGCTAGAGAAATTATGAACAATTGGACAGTGATGGCCACTGAGTTCAACTTCTGTTAAAGGAGGCATCATTCCCAGTGGTTCAAACTTTTTG-CAG---TTTTATGTTGCTGGTCA-CCAGTGC i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46481853 229 - 47448759 T-GTCTTTACCCTTGGAGTTGAGGC---------------------CAGAAATTTCCAGAAGTCTCTTTGC-----------------TCTTTTATTTTTAGAACCTT-------GATAGAGAAGGTAACATAGAAAACTGAGTTGTA----TTACTATGCAAGAGAAATTAGGAACAATTGAACAGTGTTGGTCACTGAGTTCAACTCATGTTAAAGGAGTCAGCATTGCCAGTGGTTCAGAC--CTGG-CAGGTCTTCTATGTTGCTGGTCCTCCAGTGC i calJac3.chr18 C 0 C 0 s otoGar3.GL873538 19652748 196 - 27850971 TGATCTTTACCCCTGAAGTTGAGGC---------------------AAAAAGTTTCCTGAATATTGTTTGG-----------------TCTTCCATTTTTTTGACCTCTTT-----------------------------------------TTCCTAAAAAATAGAAATTATAAACAATTTCACAGTGATGGCCACTGAGTTAGATTCATATTAAAGGAGTTATTGTCACCAGTGGATCAAAA--CTTG-CAA---TTTTATATTGCTGGTCA-CTAATGC i otoGar3.GL873538 C 0 I 124 s canFam3.chr2 79105629 252 - 85426708 TAAACTTCATCCTTGGAATTGAGGCAAAAACATTTTTTTTGAGGCAAAAAAATTTCTAAATATTCTTAGCC-----------------TCTCTCATTTTTGTAACTTCTTTACATGATAAAGAAGGTAGCTTCAAATATTGAATCATA----TGTTTAAGCAGTTGAAATTATGAGCAGTATAACAGTGATGACTACGGACTTAGATTCATGTACAAGGAG---TAATTCTCAGTAGTTCAAAG--TGTGTTAG---TTCTCTATTGCCAGTTA-CAAATGC i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1729367 830 - 2296528 M e cebCap1.NW_016107581v1 4413805 1 + 4432243 I e saiBol1.JH378197 23708 0 + 8899380 C a score=2108072.000000 s hg38.chr3_KI270784v1_alt 168665 308 + 184404 TGAGGTTAAAGACTTCTTCTG-------TTTTTTGGTTTCTG----GTTGCCTTCAGTGTCTTTGTTCAGGGAGAGAATGGGGTCATAAAATCAACCCAGCTGCCTATTAAGAGAATTATGACTTCCAGAATGG-GA-CTTTGGT-ATCAGGGTACAAACAATAACCTT---------CTTATTTTAGTAT----AAATAGTAAATGTTATTAAAATCTTT-TAATCCATTGTCACTAGTGGGACTTAGAGTATATTAGAACTGGATATAAGTGGATAATCTATCTAGA----TAACAC--TCATATTAC--AGTATAGCATTTGAAGTAGAATCTAAAAATTT s panTro5.chr3 61545 308 - 202621043 TGAGGTTAAAGACTTCTTCTG-------TTTTTTGGTCTCTG----GTTGCCTTCAGTGTCTATGTTCAGGGAGAGAATGGGGTCATAAAATCAACCCAGCTGCCTATTAAGAGAATTATGACTTCCAGAATGG-GA-CTTTGGT-ATCAGGGTACAAACAATAACCTT---------CTTATTTTAGTAT----AAATAGTAAATGTTATTAAAATATTT-TAATCCATTGTCACTAGTGGGACTTAGAGTATATTAGAACTGGATATAAGTGGATAATCTATCTAGA----TAACAC--TCATATTAC--AGTATAGCATTTGAAGTAGAATCTAAAAATTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 56473 308 - 205426864 TGAGGTTAAAGACTTCTTCTG-------TTTTTTGGTCTCTG----GTTGCCTTCAGTGTCTATGTTCAGGGAGAGAATGGGGTCATAAAATCAACCCAGCTGCCTATTAAGAGAATTATGACTTCCAGAATGG-GA-CTTTGGT-ATCAGGGTACAAACAATAACCTT---------CTTATTTTAGTAT----AAATAGTAAATGTTATTAAAATCTTT-TAATCCATTGTCACTAGTGGGACTTAGAGTATATTAGAACTGGATATAAGTGGATAATCTATCTAGA----TAACAC--TCATATTAC--AGTATAGCATTTGAAGTAGAATCTAAAAAATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 74967 307 + 508821 TGAGGTTAAAGACTTCTTCTG-------TTTTTTGGTCTCTG----GTTGCCTTCAGTGTCTATGTTCAGGGAGAGAATGGGGTCATAAAATCAACCCAGCTGCCTATTAAGAGAATTATGACTTCCAGAATGG-GA-CTTTGGT-ATCAGGGTACAAACAATAACCTT---------CTTATTTTAGTAT----AAATAGTAAATGTTATTAAAATCTTT-TAATCCATTGTCACTAGT-GGACTTAGAGTATATTAGAACTGGATATAAGTGGATAATCTATCTAGA----TAACAC--TCATATTAC--AGTATAGCATTTGAAGTAGAATCTAAAAATTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 212095 299 - 123690457 TGAGGTTAAAGACTTCTT----------GTTTTTGGTCTCTG----GTTGCCTTCAGTGTCTATGTTCAGGGAGAGAATGGGGTCATAAAATCAACCCAGCTGCCTATTAAGAGAATTACGACTTCCAGAATGG-GA-CTTTGGT-GTCAGGGTACAAACAATAA-CTT---------CTTATTTTAGGAT----AAATAGTAAGTGTTATTAAAATCTTT-TAATCCATTGTCACTAGTGGGACTTAGAATATGTTAGAACTGGATATAAGCGGATAATCTATCTAGA----TAACAC--TCATATTAC-------AGCATTTGAAGTAGCATCTAAAAATTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 42562 309 - 85730 TGAGGTTAAAAACTTCTTCTG-----TTTTTTTTGGTCTCTG----GTTGCCTTCAGTGTCTATGTTCAGGGAGAGGATGGGGTCATACAATCAACCCAACTGCCTGTTAAGAGAATTACGACTTCCAGAATGG-GA-CTTTGGT-GTCAGGGTACAAACAATAACTTT---------CTTATTTTAACAT----AAATAGTAAATGTTATTAAAATCTTT-TATTCCACTGTCACTAGTGGAACTTAGAATATATTAGAACTGAATATAAG-AAATAATCTATCCAGA----TAACAC--ACATATTAC--AGTATAGCATTTGAAGTAGAATCTAAAAATTT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1451618 308 - 112612857 TGAGGTTAAAGACTTCGTCTG-------TTTTTTGGTTTCTG----GTTGCCTTTGGTGTCTATGTTCAGGGAGAGGATGGGGTCATAAAATTAACCCAACTGCCTATTGAGAGAATGATGCCTTCCAGAAAGG-GA-CTTTGGT-GTCAGGGTACAAACAATAACTTT---------CTTGTTTTAACAT----ATATAGAAAACGCTTTAAAAAATTTT-TAACCCATTATCACCAGTGGAGCTTAGAATGTATTAGACCTGGATATAAGCAGATAACCT-TCTAGA----TAACACTATCATATTAC--GGTATAGCA-TTGGAGTAGAATCTAAAAATTT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 55992 309 + 4899514 TGAGGTTAAAAACTTCTTCTG-----TTTTTTTTGGTCTCCG----GTTGCCTTCAGTGTCTATGCTCAGGGAGAGGATGGGGTCATACAATCAACCCAACTGCCTGTTAAGAGAATTACGACTTCCAGAATGG-GA-CTTTTGT-GTCAGGGTACAAACAATAACTTT---------CTTATTTTAACAT----AAATAGTAAATGTTATTAAAATCTTT-TATTCCACTGTCACTAGTGGAACTTAGAATATATTAGAACTGAATATAAG-AAATAATCTATCCAGA----TAACAC--ACACATTAC--AGTATAGCATTTGAAGTAGAATCTAAAAATTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 56159 314 + 97742 TGAGGTTAAAAACTTCTTCTGTTTTTTTTTTTTTGGTCTCTG----GTTGCCTTCAGTGTCTATGTTCAGGGAGAGGATGGGGTCATACAATCAACCCAACTGCCTGTTAAGAGAATTACGACTTCCAGAATGG-GA-CTTTGGT-GTCAGGGTACAAACAATAACTTT---------CTTATTTTAACAT----AAATAGTAAATGTTATTAAAATCTTT-TATTCCACTGTCACTAGTGGAACTTAGAATATATTAGAACTGAATATAAG-AAATAATCTATCCAGA----TAACAC--ACATATTAT--AGTATAGCATTTGAAGTAGAATCTAAAAATTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3706501 308 - 108555830 TGAGGTTAAAGACTTCGTCTG-------TTTTTTGGTGTCTG----GTTGCCTTCAGTGTCTATGTTCAGGGAGAGGATGGGTTCATAAAATCAGCCCAACTGCCTATT-AGAGAATCATGCCTTCCAGAAAGG-GA-CTTTGGT-GTCAGGGTACAAACAATAACTTT---------CTTGTTTTAACAT----AAATAGAAAATGCTATTAAAATGTTT-TAACCCACTGTCACTAGTGGAGCTTAGAATATATTAGACCTGGATATAAG-CAGATGACTTTCTAGA----TAACACTGTCATATTAC--AGTAGAACATTTAAAGTAGAATCTAAAAATTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 56194 313 + 85016 TGAGGTTAAAAACTTCTTCTG-TTTTTTTTTTTTGGTCTCTG----GTTGCCTTCAGTGTCTATGTTCAGGGAGAGGATGGGGTCATACAATCAACCCAACTGCCTGTTAAGAGAATTACGACTTCCAGAATGG-GA-CTTTGGT-GTCAGGGTACAAACAATAACTTT---------CTTATTTTAACAT----AAATAGTAAATGTTATTAAAATCTTT-TATTCCACTGTCACTAGTGGAACTTAGAATATATTAGAACTGAATATAAG-AAATAATCTATCCAGA----TAACAC--ACATATTAC--AGTATAGCATTTGAAGTAGAATCTAAAAATTT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1035238 298 - 1267912 TGAGGTTAAAAACTTCTTCTC------TTTTTTTGGTCTCTG----GTTGTCTTCAGTGTCTATGTTCAGGGAGAGGATGGGGTCATACAATCAACCCAACTGCCTATTAAGAGAATTACGACTTTCAGAATGG-GA-CTTTGGT-GTCAGGGTACAAACAATAAATTT---------CTTATTTTAACAT----AAATAGTAAACATTATTAAAATCTTT-TATTCCACTGTCACTAGTGGAACTTAGAATATATTAGAACTAAATATAAG-AAATAATCTATCCAGA----TAACAC--TCAT------------AGCATTTGAAGTAGAATCTAAAAATTT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46482082 315 - 47448759 TGAGGTTAAAGATTTCTTCTG-------TTTTTTGATCTTTG----GTTACCTTCAGTGTCTATGTCCAGGGAGAGAATGGGGTCATAAAATCAACCCAACTGCCTATTAAGAGAATTATGCCTTCCAGAATGGAAA-CTTTGGT-GTCAGGATACAAACAATAACTTT---------CTTATTTTAGCAT----AAATAGTAAATATTACTAAAATTGAT-TAATCCACTGTCACTAGTGGAACTTAGAATACATTAGAACTGCATTTAAGCAGATAATCTCTCTAGATACGTAACACTATCATATTACATATCATATCACTT--AGAAGAACGTAGACATTG i calJac3.chr18 C 0 C 0 s otoGar3.GL873538 19653068 318 - 27850971 CAAGGTTAAAGATTTATTCTG-------CCTTGTGGTCTCTA----ACTGATTTCAGTGTCTATGTTCACACAGACAATGGGGTCATGAAATCAACCCAACTGCCTATTAAGAGAATCATAGCTTATAGAAGGG-GACCTTTAAT-GTCAGGGTACAAACAATAAATTTCTAA-----CTTATTTCAATATAGG-AAATCataaatattattaaaattatt-ta-tCCATTGTCATTACTGG-ATTTAGAGT--ATTAGAATGGGATGTAAGCAGATAATCTATGTAGATGCATAACATTATCCTATTAT--GGCATATAATTTGAATTGAAATTTAAGAGTTT i otoGar3.GL873538 I 124 I 332 s canFam3.chr2 79105881 307 - 85426708 CAAGATTAAAGATTTATTCTG-------CCTTGTGATCTCTGTGTAGTTGACTTC-----------------AGAGAATGGAGTCACAAAATCAACACAATTGCCTATT-GTAGAATCACACCTTCCTGGATGG-GA-CCTTTATAGTTGGATTATACACAATAACTTTTTCAGTTATTTTATTTCAGCATAGGAAATCAGTAAGTATTATTAATATTTTTCTTATCCACTCTC---AGTGGACATTACAAGATATTAGAGCTGGATACAAGCACATAATGTATAGCAATGTTTAACAC--TC---TCAT--AGTACATAATTTGAATTAAAATGTAGAAATTT i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1729367 830 - 2296528 M e cebCap1.NW_016107581v1 4413805 1 + 4432243 I e saiBol1.JH378197 23708 0 + 8899380 C a score=170833.000000 s hg38.chr3_KI270784v1_alt 168973 24 + 184404 TATTCTCTTTCTGATTGGTGTTCA s panTro5.chr3 61853 24 - 202621043 TATTCTCTTTCTGATTGGTGTTCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 56781 24 - 205426864 TATTCTCTTTCTGATTGGTGTTCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 75274 24 + 508821 TATTCTCTTCCTGATTGGTGTTCA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 212394 24 - 123690457 TGTTCTCTTTCTGATTGGTGTTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 42871 24 - 85730 TCTTCTCTTTCTGATTGGTGTTCA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1451926 24 - 112612857 TCTTCTCTTTCTGATTGGTGTTCA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 56301 24 + 4899514 TCTTCTCTTTCTGATTGGTCTTCA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 56473 24 + 97742 TCTTCTCTTTCTGATTGGTGTTCA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3706809 24 - 108555830 TCTTCTCTTTCTGATTGGTGTTCA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 56507 24 + 85016 TCTTCTCTTTCTGATTGGTGTTCA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1035536 24 - 1267912 TCTTCTCTTTCTGATTGGTGTTCA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46482397 24 - 47448759 TCTTTTCTTTCTAATTGGTGTTCA i calJac3.chr18 C 0 C 0 s canFam3.chr2 79106188 22 - 85426708 ACTTTTCTT--TGATTGATGTTAA i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1729367 830 - 2296528 M e otoGar3.GL873538 19653386 332 - 27850971 I e cebCap1.NW_016107581v1 4413805 1 + 4432243 I e saiBol1.JH378197 23708 0 + 8899380 C a score=48773.000000 s hg38.chr3_KI270784v1_alt 168997 7 + 184404 ----TTTTGGC s panTro5.chr3 61877 7 - 202621043 ----TTTTGGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 56805 7 - 205426864 ----TTTTGGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 75298 7 + 508821 ----TTTTGGC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 212418 7 - 123690457 ----TTTTGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 42895 7 - 85730 ----CTTTGGT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1451950 7 - 112612857 ----TTTTGAC i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 56325 7 + 4899514 ----TTTTGGT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 56497 7 + 97742 ----TTTTGGT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3706833 7 - 108555830 ----TTTTGGC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 56531 7 + 85016 ----TTTTGGT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1035560 7 - 1267912 ----TTTTGGC i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46482421 7 - 47448759 ----TTTTGTC i calJac3.chr18 C 0 C 0 s otoGar3.GL873538 19653718 7 - 27850971 ----TTCTGTC i otoGar3.GL873538 I 332 C 0 s canFam3.chr2 79106210 11 - 85426708 TTGATGTTGGC i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1729367 830 - 2296528 M e cebCap1.NW_016107581v1 4413805 1 + 4432243 I e saiBol1.JH378197 23708 0 + 8899380 C a score=334213.000000 s hg38.chr3_KI270784v1_alt 169004 35 + 184404 TTCTAATAGTTTAGCATTTGCCTACTCTCCAGTTA s panTro5.chr3 61884 35 - 202621043 TTCTAATAGTTTAGCATTTGCCTACTCTCCAGTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 56812 35 - 205426864 TTCTAATAGTTTAGCATTTGCCTACTCTCCAGTTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 75305 35 + 508821 TTCTAATAGTTTAGCATTTGCCTACTCTCCAGTTA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 212425 26 - 123690457 ---------TTTAGCACTTGCCTACTCTCCAGTTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 42902 35 - 85730 TTCTAATAATTTAGCATTTGCCTACTCTCTGGTTA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1451957 35 - 112612857 TTCTAATATTTTAGCAATTGCCTACTCTTTAGTTA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 56332 35 + 4899514 TTCTAATAATTTAGCATTTGCCTACTCTCCGGTTA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 56504 35 + 97742 TTCTAATAATTTAGCATTTGCCTACTCTCTGGTTA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3706840 35 - 108555830 TTCTAATAATTTAGCATTTGCATACTCTTTAGTTA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 56538 35 + 85016 TTCTAATAATTTAGCATTTGCCTACTCTCTGGTTA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1035567 35 - 1267912 TTCTAATAATTTAGCATTTGCCTACTCTCTGGTTA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46482428 35 - 47448759 TTCTAATAACTTAGCATTTGCCTACTCTTCAGGTT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 23708 35 + 8899380 TTCTGACAATTTAGCATTTGCCTACTCTCCAGTTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4413806 35 + 4432243 TTCTAATAATTTAGCATTTGCCTACTCTCCAGTTA i cebCap1.NW_016107581v1 I 1 C 0 s otoGar3.GL873538 19653725 34 - 27850971 CCATAATAATATAAAATTTACCCACTCTC-AGTTA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79106221 33 - 85426708 TCCTAATAATTTAG--TTTGCCTATTCTCTAGTCA i canFam3.chr2 C 0 I 192 e dasNov3.JH570393 1729367 830 - 2296528 M a score=588901.000000 s hg38.chr3_KI270784v1_alt 169039 67 + 184404 ATCTTCAGAAATA----TGAA----------------TTTACTGTAGGGGTTCACTATTTATGGTATCCTGAGGTCAAAATCCTTTT s panTro5.chr3 61919 67 - 202621043 ATCTTCAGAAATA----TGAA----------------TTTACTGTAGGGGTTCACTATTTATGGTATCCTGAGGTCAAAATCCTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 56847 67 - 205426864 ATCTTCAGAAATA----TGAA----------------TTTACTGTAGGGGTTCACTATTTATGGTATCCTGAGGTCAAAATCCTTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 75340 67 + 508821 ATCTTCAGAAATA----TGAA----------------TTTACTGTAGGGGTTCACTATTTATGGTATCCTGAGGTCAAAATCCTTTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 212451 67 - 123690457 ATCTTCAGAAATA----TGAA----------------TTTACTGTAGGGGTTCACTATTTATGGTATGCTGAGGTCAAAATCCTTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 42937 67 - 85730 ATCTTCAGAAATA----TGAA----------------TTTACTGTAGGGGTTCACTATTTATGGTATGCCAAGGTCAAAATCCTTTT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1451992 67 - 112612857 ATCCTCAGAAATA----TGAA----------------TTCACTGTAGGGGTTCACTATTTAGGGTATGCTGAGGTAAAAATCATTCC i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 56367 67 + 4899514 ATCTTCAGAAATA----TGAA----------------TTTACTGTAGGGGTTCACTATTTATGGTATGCTGAGGTCAAAATCCTTTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 56539 67 + 97742 ATCTTCAGAAATA----TGAA----------------TTTACTGTAGGGGTTCACTATTTATGGTATGCTGAGGTCAAAATCTTTTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3706875 67 - 108555830 ATCCTTAGAGATA----TTAA----------------TTCACTGTAGGTGTTCACTGTTTAGGGTATGCTGAGGTAAAAATCCTTTC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 56573 67 + 85016 ATCTTCAGAAATA----TGAA----------------TTTACTGTAGGGGTTCACTATTTATGGTATGCTGAGGTCAAAATCTTTTT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1035602 67 - 1267912 ATCTTCAGAAATA----TGAA----------------TTTACTGTAGGGGTTCACTATTTATGGTATGCTGAGGTCAAAATCCTTTT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46482463 67 - 47448759 ATCTTTAGAAACA----TCAA----------------TTCTCTGTATAAGTTCACTATCTATGATATGCTGAGGTAAAAATCTTTTT i calJac3.chr18 C 0 I 23 s saiBol1.JH378197 23743 67 + 8899380 TTCTTCAGATGTA----TGAA----------------TTCACTGCAGGGGTTCACTATTTACGGTTTGCTGAGGTAAAAATCCTTCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4413841 54 + 4432243 ATCCTCAGAAGTA----TGAA-----------------------------TTCACTATTTATAGTTTGCTGAGGTAAAAATCATTTT i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19653759 71 - 27850971 GGCTTTAGAAACAGTTCTGAA---------------GTGCCCTGTAGTAGCTCACTATTTAAAGTATTGTAAGGT-AAAATCTTTTA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79106446 82 - 85426708 atctttaaaaaaa----CAAAAACAAAAACCCTAAAATGCATTGTAGGAGCTCACTGTTTAAGATATGATGAGAT-AAAATGTTTTT i canFam3.chr2 I 192 C 0 e dasNov3.JH570393 1729367 830 - 2296528 M a score=58984.000000 s hg38.chr3_KI270784v1_alt 169106 8 + 184404 AAGAGAGA s panTro5.chr3 61986 8 - 202621043 AAGAGAGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 56914 8 - 205426864 AAGAGAGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 75407 8 + 508821 AAGAGAGA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 212518 8 - 123690457 AAGAGAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 43004 8 - 85730 AAGAGAGA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1452059 8 - 112612857 AAGACAGA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 56434 8 + 4899514 AAGAGAGA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 56606 8 + 97742 AAGAGAGA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3706942 8 - 108555830 AAGAGAGA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 56640 8 + 85016 AAGAGAGA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1035669 8 - 1267912 AAGAGAGA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 23810 8 + 8899380 CAGAGAGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4413895 8 + 4432243 ATGAGAGG i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19653830 8 - 27850971 AAAGGAGG i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79106528 3 - 85426708 AAG----- i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1729367 830 - 2296528 M e calJac3.chr18 46482530 23 - 47448759 I a score=1646213.000000 s hg38.chr3_KI270784v1_alt 169114 200 + 184404 AAGCCTTTAGAATACTACAT----------ATCATCTGTGAGCCCATTTC-TGGCAGA--TTTAATTCATAATGAATTAAGTTTAGTCCAAACTA-ACAG---TG--AGAG---TTAAGCTTGCTGGTTCATGTTTTTCTCCTATGTTAAGCCAAGGCAAACTAT-TTTTTACTTCTTAGTTATAATCCAGTAACTTAGGGATAGCAAAACATAGATTAAGTT s panTro5.chr3 61994 200 - 202621043 AAGCCTTTAGAATACTACAT----------ATCATCTGTGAGCCCATTTC-TGGCAGA--TTTAATTCATAATGAATTAAGTTTAGTCCAAACTA-ACAG---TG--AGAG---TTAAGCTTGCTGGTTCATGTTTTTCTCCTATGTTAAGCCAAGGCAAACTAT-TTTTTACTTCTTAGTTATAATCCAGTAACTTAGGGATAGCAAAACATAGATTAAGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 56922 200 - 205426864 AAGCCTTTAGAATACTACAT----------ATCATCTGTGAGCCCATTTC-TGGCAGA--TTTAATTCATAATGAATTAAGTTTAGTCCAAACTA-ACAG---TG--AGAG---TTAAGCTTGCTGGTTCATGTTTTTCTCCTATGTTAAGCCAAGGCAAACTAT-TTTTTACTTCTTAGTTATAATCCAGTAACTTAGGGATAGCAAAACATAGATTAAGTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 75415 200 + 508821 AAGCCTTTAGAATACTACAT----------GTCATCTGTGAGCCCATTTC-TGGCAGA--TTTAATTCGTAATGAATTAAGTTTAGTCCAAACTA-ACAG---TG--AGAG---TTAAGCTTGCTGGTTCATGTTTTTCTCCTATGTTAAGCCAAGGCAAACTAT-TTTTTACTTCTTAGTTATAATCCAGTAACTTAGGGATAGCAAAACATAGATTAAGTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 212526 200 - 123690457 AAGCCTTTAGAATACTACAT----------ATCATCTGTGAGCCCATTTC-TGGCAGA--TTTAATTCATAATGAATTAAGTTTAGTCCAAACTA-ACGG---TG--AGAG---TTAAGCTTGCTGGTTCATGTTTTCCTCCTATGTTAAGCCAAGGCAAATTAT-TTTTTACTTCTTAGTTATAATCCAGTAACTTGGGGGTAGCAAAACATAGATTAAGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 43012 194 - 85730 AAGCTTTTAGAATACTACAT----------ATCATCTGTGAACCCATTTC-TGGAAGA--T----TTCATAATGAATTAAGTTTAGTCCAAACTA-ACAG---TG--AGAG---TTAAGCTTGCTGGTTCATGTTTTTCTCC--TGTTAAGCCAAGGCAAATTAT-TTTTTATTTCTTAGTTATAATCCAGTAACTTAGGGGTAGCAAAACATAGATTAAGTT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1452067 199 - 112612857 AAGCCTTTAGAATACTATGT----------ATCATCTGTGAACCCATTTC-TGGCAGA--TTTAATTCATAATGAATTAAGTTTACTCCAAACAA-ACAG---AA--AGAG---TTAGGCTTCCTTGGTCACTTTTTTCTCCTATATTAAGCCAAGGCAAATTAT--TTTTATTTCTTAGTTATAATCCAGTAATTTAGAGGTAGTAAAACATAGATTATGTT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 56442 194 + 4899514 AAGCTTTTAGAATACTGCAT----------ATCATCTGTGAAACCATTTC-TGGAAGA--T----TTCATAATGAATTAAGTTTAGTCCAAACTA-ACAG---TG--AGAA---TTAAGCTTGCTGGTTCATGTTTTTCTCC--TGTTAAGCCAAGGCAAATTAT-GTTTTACTTCTTAGTTATAATCCAGTAACTTAGGGGTAGCAAAACATAGATTAAGTT i macNem1.NW_012020287v1 C 0 I 180 s cerAty1.NW_012005170v1 56614 196 + 97742 AAGCTTTTAGAATACTACAT----------ATCATCTGTGAACCCATTTC-TGGAAGA--T----TTCATAATGAATTAAGTTTAGTCCAAACTA-ACAG---TG--AGAG---TTAAGCTTGCTGGTTCATGTTTTTCTCCTATGTTAAGCCAAGGCAAATTAT-TTTTTACTTCTTAGTTATAATCCAGTAACTTAGGGGTAGCAAAACATAGATTAAGTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3706950 196 - 108555830 AAGCCTATAGAATACTACAT----------ATCATCTGTGAACCCATTTC-TGTCAGA--TTTAATTCATAATGAATTAAGTTTACTCCAAACAA-AC---------AGAG---TTAAGCTTCCTGACTCATGTTTTTCTCCTATATTAAGCCAAGGCAAATTAT-TTTTTACTTCTTAGTTATAATCCAGTAACTTAGGGATAGTAAAACATAGATTAAGTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 56648 196 + 85016 AAGCTTTTAGAATACTACAT----------ATCATCTGTGAACCCATTTC-TGGAAGA--T----TTCATAATGAATTAAGTTTAGTCCAAACTA-ACAG---TG--AGAG---TTAAGCTTGCTGGTTCATGTTTTTCTCCTATGTTAAGCCAAGGCAAATTAT-TTTTCACATTTTAGTTACAATCCCATCATATAAGAGTAGCGACACATAGATTAAGTA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1035677 200 - 1267912 AAGCTTTTGGAATACTACAT----------ATCATCTGTGAACCCATTTC-TGGCAGA--TTTAATTCATAATGAATTAAGTTTAGTCCAAACTA-ACAG---TG--AGAG---TTAAGCTTGCTGGTTCATGTTTTTCTCCTATGTTAAGCCAAGGCAAATTAT-TTTTTACTTCTTAGTTATAATCCAGTAACTTAGGGGTAGCAAAACACAGATTAAGTT i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 23818 174 + 8899380 TCGC-TTTATGATACTACAT----------ATCATCTAGCAACGCGTTTC-TGGCAGA--TTTAATTCAT----AATTAAGTTTTCTTCAAACAG--------TG--AGAG---TTAAGCTTG------------------CTGTGTTAAGCCAAGGCAAATTACTTTTTTACTTCTTAGTTATAATCCAGTAACTTAGGAGTAGCAAACCATACATTAAATT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4413903 199 + 4432243 AAGC-TTTATAATACTACAT----------ATCATCTGTGAACCCATTTC-TGGCAGA--TTTAATTCATAATAAATTAAGTTTAGTCCAAACAA-ACAT---TG--AGAG---TTAAGCTTGCTGGTTCTTGTTTTTCTTCTGTGTTAAGCCAAGGCAAATTGC-TTTTTACTTCTTAGTTATAATCCAGTAACTTAGGGGTAGCAAAGCATATATTAGGTT i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19653838 213 - 27850971 ATGCCTCTATTATACTATATATACTAACAGATCATCTGCTAATTCATTTT-TGGTGTAATTTTAACACAAAATGAATCAAGTTTAGTCTAAACAA-ATAA---TGGTAAAG---TTAAGCTTTCTGGTTCATGTTTTTTTCCTATTTTAGGATAAAGCAAATTAT--TTTTACTTCTTAGTTTCAATCCAGTGAACTCGAGGTAGCTAAACATAGATTAAGAA i otoGar3.GL873538 C 0 I 3 s canFam3.chr2 79106531 169 - 85426708 -----TTTGTAACATTAAAA----------ATCATCT---AATTCATTTCTTGGTGGA--TGTAACATGTAATGAATTA--TTTAGTTAAAAAAA-AAAAACCTG--AGAAAATTTAAGTGTATGGATTTGTGGTTTTCTTCTG----------------------TCTTCACTTCTTAGTTATAATCCAGTGACTTGGGAGCAGCAAATAACAAA------- i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1730215 193 - 2296528 AAACCTTTGTAATATTAAAA----------ATTATCTCCTAATTCAGTTT-TGGTAAT--TTTAATATATAATGAAGTAAGCTTAGTCTAAACCATACAG---TGACAGAA---TTGGGTTTGCTGCTTCATGTTTTTCTCATATTTT------AGGCAAATTAT-TTTTCACTTCTTA----CAGTTCAGTGATTTGGGAGTAGCTAAACATAGGTCGAGTT i dasNov3.JH570393 M 830 C 0 e calJac3.chr18 46482530 23 - 47448759 I a score=57917.000000 s hg38.chr3_KI270784v1_alt 169314 9 + 184404 TTACAGTTA s panTro5.chr3 62194 9 - 202621043 TTACAGTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 57122 9 - 205426864 TTACAGTTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 75615 9 + 508821 TTACAGTTA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 212726 9 - 123690457 TTACAGTTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 43206 9 - 85730 TTACAGTTA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1452266 9 - 112612857 TCACAGTTC i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 56816 9 + 4899514 TTACAGTTA i macNem1.NW_012020287v1 I 180 C 0 s cerAty1.NW_012005170v1 56810 9 + 97742 TTACAGTTA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3707146 9 - 108555830 TCACAGTTC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 56844 7 + 85016 T--CAGTTA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1035877 9 - 1267912 TTACAGTTA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 23992 9 + 8899380 TCACAGTTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4414102 9 + 4432243 TCACAGTTA i cebCap1.NW_016107581v1 C 0 I 335 s otoGar3.GL873538 19654054 9 - 27850971 TAACAGTTA i otoGar3.GL873538 I 3 C 0 s dasNov3.JH570393 1730408 1 - 2296528 ----A---- i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79106700 0 - 85426708 C e calJac3.chr18 46482530 23 - 47448759 I a score=-1380.000000 s hg38.chr3_KI270784v1_alt 169323 1 + 184404 C s panTro5.chr3 62203 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chr3 57131 1 - 205426864 C i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 75624 1 + 508821 C i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 212735 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 43215 1 - 85730 A i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1452275 1 - 112612857 A i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 56825 1 + 4899514 A i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 56819 1 + 97742 A i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3707155 1 - 108555830 A i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 56851 1 + 85016 A i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1035886 1 - 1267912 A i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 24001 1 + 8899380 A i saiBol1.JH378197 C 0 I 326 s otoGar3.GL873538 19654063 1 - 27850971 A i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1730409 1 - 2296528 C i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79106700 0 - 85426708 C e cebCap1.NW_016107581v1 4414111 335 + 4432243 I e calJac3.chr18 46482530 23 - 47448759 I a score=205161.000000 s hg38.chr3_KI270784v1_alt 169324 27 + 184404 ATTTTAATTA-TTTTCTATTTT----TTTATT s panTro5.chr3 62204 27 - 202621043 ATTTTAATTA-TTTTCTATTTT----TTTATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 57132 27 - 205426864 ATTTTAATTA-TTTTCTATTTT----TTTATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 75625 26 + 508821 ATTTTAATTA-TTTTCTA-TTT----TTTATT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 212736 27 - 123690457 ATTTTAATTA-TTTTCTATTTT----TTTGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 43216 26 - 85730 ATTTTAATTA-TTTTCTA-TTT----TTTGTT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1452276 30 - 112612857 ATTTTAATTA-TTTTCTA-TTTTTTCTTTGTT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 56826 26 + 4899514 ATTTTAATTA-TTTTCTA-TTT----TTTGTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 56820 26 + 97742 ATTTTAATTA-TTTTCTA-TTT----TTTGTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3707156 30 - 108555830 ATTTTAATTA-TTTTCTA-TTTTTTCTTTGTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 56852 26 + 85016 ATTTTAATTA-TTTTCTA-TTT----TTTGTT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1035887 26 - 1267912 ATTTTAATTA-TGTTCTA-TTT----TTTGTT i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 24328 30 + 8899380 ATTTTAATTA-TTTTCTA-TTTTTTCCTTGTT i saiBol1.JH378197 I 326 C 0 s otoGar3.GL873538 19654064 26 - 27850971 TTTTTAATTA-TTTTCTA-ATT----TTTCTT i otoGar3.GL873538 C 0 I 4 s canFam3.chr2 79106700 30 - 85426708 ATTTTAATTA-TTTTCTA-ATTTTCCTTTGTC i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1730410 31 - 2296528 ATTTTAATTATTTTTCTA-ATTTTTCTTTGTC i dasNov3.JH570393 C 0 C 0 e cebCap1.NW_016107581v1 4414111 335 + 4432243 I e calJac3.chr18 46482530 23 - 47448759 I a score=437218.000000 s hg38.chr3_KI270784v1_alt 169351 42 + 184404 CATACTTAA----TTCAGAATAAAGTTAATTTTAAAACATGCACCC s panTro5.chr3 62231 42 - 202621043 CGTACTTAA----TTCAGAATAAAGTTAATTTTAAAACATGCACCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 57159 42 - 205426864 CTTACTTAA----TTCAGAATAAAGTTAATTTTAAAACATGCACCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 75651 42 + 508821 CATACTTAA----TTCAGAATAAAGTTAATTTTAAAACATGCACCC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 212763 42 - 123690457 CATACTTAA----TTCAGAATAAAGTTAATTTTAAAACATGCACCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 43242 42 - 85730 CATACTTAT----TTCAGGATAAAGTTAATTTAAAAACATGCACCC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1452306 42 - 112612857 CATACTTAA----TTTAGAATAAAGTTAATTTTAAAACATGCACCC i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 56852 42 + 4899514 CATACTTAA----TTCAGAATAAAGTTAATTTTAAAACATGCACCC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 56846 42 + 97742 CATACTTAA----TTCAGAATAAAGTTAATTTTAAAACATGCACCC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3707186 42 - 108555830 CATACTTAA----TTGAGACTAAAGTTAATTTTAAAACATACACCC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 56878 42 + 85016 CATACTTAA----TTCAGAATAAAGTTAATTTTAAAACATGCACCC i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1035913 42 - 1267912 CATACTTAA----TTCAGAATAAAGTTAATTTTAAAACATGCACCC i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 24358 42 + 8899380 CACACTTAA----TTCAGAATAAAGTTAATTTTAAAACATGTACCC i saiBol1.JH378197 C 0 I 664 s cebCap1.NW_016107581v1 4414446 42 + 4432243 CATATTTAA----TTCAGAATAAAGTTAATTTTAAAACATGTACCC i cebCap1.NW_016107581v1 I 335 C 0 s otoGar3.GL873538 19654094 46 - 27850971 CATACTTGATTACTTAAGGATAAAGTTATTTTAAAAACATACACCC i otoGar3.GL873538 I 4 C 0 s canFam3.chr2 79106730 46 - 85426708 CATACTTGATTACTTAAGGATAAAGTTATTTTACAAACATATATCC i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1730441 46 - 2296528 CATACTTGATCACTTAAGGATAAAGTTATTTTTAAAACATGCACCC i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46482530 23 - 47448759 I a score=950818.000000 s hg38.chr3_KI270784v1_alt 169393 102 + 184404 TAACAGAAAAGACATCTGAGAAACAAAACAAGCAAATTAATTTTCCACTTTTGCACCTGC----------AAAAAAATGTCTCAAGAACCAGAACTGAGTAAGAATTGTGAT s panTro5.chr3 62273 102 - 202621043 TAACAGAAAAGACATCTGAGAAACAAAACAAGCAAATTAATTTTCCACTTTTGCACCTGC----------AAAAAAATGTCTCAAGAACCAGAACTGAGTAAGAATTGTGAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 57201 102 - 205426864 TAACAGAAAAGACATCTGAGAAACAAAACAAGCAAATTAATTTTCCACTTTTGCACCTGC----------AAAAAAATGTCTCAAGAACCAGAACTGAGTAAGAATTGTGAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 75693 101 + 508821 TAACAGAAAAGACATCTGAGAAACAAAACAAGCAAATTAATTTTCCACTTTTGCACCTGC-----------AAAAAATGTCTCAAGAACCAGAACTGAGTAAGAATTGTGAT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 212805 102 - 123690457 TAACAGAAAAGACATCTGAGAAACAAAACAAGCAAATTAATTTTCCACTTTTGCACCTGC----------AAAAAAATGTCTCAAGAACCAGAGCTGAGTAAGAATTGTGAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 43284 109 - 85730 TAACAGAAAAGACATCTGAGAAACAAAACAAGCAAATTAATTTTCCACTTTTGCACCTGC---AAAAAAAAAAAAAATGTCTCAAGAACCAGAACTGAGTAAGAATTGTGAT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1452348 102 - 112612857 TGTCAGAAAAGACATCTGAGAAACAAAAGAAGCAAATTAATTTTCCACTTTTGCACTTGC----------AAAAAAATGTCTCAAACACCAGAACCGAGTAAGAATTGTAAT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 56894 109 + 4899514 TAACAGAAAAGACATCTGAGAAACAAAACAAGCAAATTAATTTTCCACTTTTGCACCTGC---AAAAAAAAAAAAAATGTCTCAAGAACCAGAACTGAGTAAGAATTGTGAT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 56888 112 + 97742 TAACAGAAAAGACATCTGAGAAACAAAACAAGCAAATTAATTTTCCACTTTTGCACCTGCaaaaaaaaaaaaaaaaaTGTCTCAAGAACCAGAACTGAGTAACAATTGTGAT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3707228 109 - 108555830 TGTCAGAAAAGACATCTGAGAAACAAAAGAAGCAAATTAATTTT-CACTTTTGCACCTGC--AAAAAAAAAAAAAAATGTCTCAAGAACCAGAACTGGGTGAGAATTGTGAT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 56920 109 + 85016 TAACAGAAAAGACATCTGAGAAACAAAACAAGCAAATTAATTTTCCACTTTTGCACCTGC---AAAAAAAAAAAAAATGTCTCAAGAACCAGAACTGAGTAACAATTGTGAT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1035955 106 - 1267912 TAACAGAAAAGACATCTGAGAAACAAAACAAGCAAATTAATTTTCCACTTTTACACCTGC------AAAAAAAAAAATGTCTCAAGAACCAGAACTGAGTAAGAATTGTGAT i colAng1.NW_012116822v1 C 0 C 0 s cebCap1.NW_016107581v1 4414488 100 + 4432243 GGACAGAAAAGACATCTGAGAAACAAAACAAGCAAATTAATTTCCCACTTTGGCACCTGC------------AAAAAAGTCTCAAGAACCAGAACTGAGTAAGAATTGTGAT i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19654140 101 - 27850971 CGACAGAAAAGACATCTGAGAAACAAAACAAGCAAACTAATGTTCCACATTTACATCTGC-----------AAAAAATGTCTCAAGAATCAGAAATGAATAAGAATTGTGAT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79106776 101 - 85426708 TGGCAGAAGAGACATCTGAAAGTCAAACCAAGCAAATTAGGATTCCATTTTTGCAACTGC-----------AAAAAATGGCTCAAGAACCAGAAATGAATAAGGAATGTGAT i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1730487 101 - 2296528 TGACAGAAAAGACATCTGAAAATCAAACCAAGCAAATTAATCTTCCACTTTTGCATCTGC-----------AAAAAATATCTCAAGAACCAGAAATGAATAAGGAATGTGAT i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46482530 23 - 47448759 I e saiBol1.JH378197 24400 664 + 8899380 I a score=276258.000000 s hg38.chr3_KI270784v1_alt 169495 40 + 184404 AAAGAGTGT---TTATCTGTATATTCAGGGCTTCCTTT--------------------------------------------------AAAAT---------- s panTro5.chr3 62375 40 - 202621043 AAAGAGTGT---TTATCTGTATATTCAAGGCTTCCTTT--------------------------------------------------AAAAT---------- i panTro5.chr3 C 0 C 0 s panPan2.chr3 57303 40 - 205426864 AAAGAGTGT---TTATCTGTATATTCAAGGCTCCCTTT--------------------------------------------------AAAAT---------- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 75794 40 + 508821 AAAGAGTGT---TTATCTGTATATTCAGGGCTTCCTTT--------------------------------------------------AAAAT---------- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 212907 40 - 123690457 AAAGAGTGT---TTATCTGTATATTCAGGACTTCCTTT--------------------------------------------------AAAAT---------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 43393 41 - 85730 AAAGAGGGTA--TTATCTGTATATTCAAGACTTCTTTT--------------------------------------------------AAAAT---------- i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1452450 40 - 112612857 AAAGAGGATA---TATCTGTATATTCAGGACTTCTTTT--------------------------------------------------AAAAT---------- i macFas5.chr15 C 0 I 307 s macNem1.NW_012020287v1 57003 41 + 4899514 AAAGAGGGTA--TTATCTGTATATTCAAGACTTCTTTT--------------------------------------------------AAAAT---------- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 57000 41 + 97742 AAAGAGGGTA--TTATCTGTATATTCAAGACTTCTTTT--------------------------------------------------AAAAT---------- i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3707337 40 - 108555830 AACGGGAAT---CTATCTGTATATTCAGGACTTCCTTT--------------------------------------------------AAAAT---------- i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 57029 41 + 85016 AAAGAGGGTA--TTATCTGTATATTCAAGACTTCTTTT--------------------------------------------------AAAAT---------- i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1036061 41 - 1267912 AAAGAGGGTA--TTATCTGTATATTCAAGACTTCTTTT--------------------------------------------------AAAAG---------- i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 25064 40 + 8899380 AAAGAACAT---ACATCTGTATATTCAGGACTTCCTTT--------------------------------------------------AAAAT---------- i saiBol1.JH378197 I 664 C 0 s cebCap1.NW_016107581v1 4414588 40 + 4432243 AAAGAGTTT---ATATCTGTATATTCAGGACTTCCTTT--------------------------------------------------AAAAT---------- i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19654241 90 - 27850971 AGAGAGAAT---ATATCTGCACATTCAAGACTTCTTTGTGTGCAAAAGGATGAGGAAATGTGGATCAAACAAGGCAAGTTAGAGTGGAAAAAT---------- i otoGar3.GL873538 C 0 I 10 s canFam3.chr2 79106877 93 - 85426708 AGAGAGGATGATAGATCTGTACACTCAGAACATCCTTGTGTGTAAAAGTATGAGGAAATGTGGATGAAACAAGGGTAATTAGATTGGAAAAAT---------- i canFam3.chr2 C 0 I 10 s dasNov3.JH570393 1730588 100 - 2296528 AGAGAGGAT---AAATCTGTATATTCAGGACTTCCTTTTATGCAAAAGTATGAGGAAATGTGGATCAAACAAGGAAAGATAGAGTGGAAAAATAATTTAAAAC i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46482530 23 - 47448759 I a score=25422.000000 s hg38.chr3_KI270784v1_alt 169535 3 + 184404 TAA s panTro5.chr3 62415 3 - 202621043 TAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 57343 3 - 205426864 TAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 75834 3 + 508821 TAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 212947 3 - 123690457 TAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 43434 3 - 85730 TCA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1452797 3 - 112612857 TCA i macFas5.chr15 I 307 C 0 s macNem1.NW_012020287v1 57044 3 + 4899514 TCA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 57041 3 + 97742 TCA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3707377 3 - 108555830 TCA i chlSab2.chr12 C 0 I 301 s manLeu1.NW_012101680v1 57070 3 + 85016 TCA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1036102 3 - 1267912 TCA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 25104 3 + 8899380 TCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4414628 3 + 4432243 TCA i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19654341 3 - 27850971 TCA i otoGar3.GL873538 I 10 C 0 s canFam3.chr2 79106980 3 - 85426708 TCA i canFam3.chr2 I 10 C 0 s dasNov3.JH570393 1730688 3 - 2296528 TCA i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46482530 23 - 47448759 I a score=7037798.000000 s hg38.chr3_KI270784v1_alt 169538 798 + 184404 TTACAAGAAAGTTCAA-CTGAAAATTGGTG-AAAGTTT-TGAAAAATCCAAAATTACTGTTTGTCCTGAGGAAGAGCTCTTACATAGTTACTCTAAAG-AGGGACAAAATTAAAGGAAGTGCCCTCTAACCCAATGAATCATGTCCCTGA------CTGCAAGGAAGCAGATGCATCTTGGAGTGTCGAACTCTGTAGTATCCCAGGCATTGCCTGAACAGGAGGAGAACA-TCACAAACCTGTCTTTTCATTGTATTTATACTCTGGGTCCCTCAAACACACCTGCCAGTCATCTTCTAAGCTTTATTCAAATGAAAATAAATCAGACTGTAAAACTTGTAACTATCCAGACATGTAGCCTGTTTCT--CAGAGATG-------AAGAGAATTG-TTGTAATGATACAGAAATAGAAAAATTAGGGAACCC---A---GTAGTTATGGTTGAAATGAAAGAGGACCAAGAGTTTGATATGCAAATGAC-AAAAAAATATAAACCAAAATACCGTTAATTGGAAATTAGACATTAGA-------CATTGGCCTCAGTCTAGAGATCCAAAAAGTCTGT-TTGATTTGTGGTTTGTTTACTCTAAAGAAATGAAGCATGTGATACAGATAGAAAGCCACAGTATTTCTGCTGTTACAGACACTTACAAAAACAAAAATCCAGTA-AGCACTTGTTCCACAAGCCATATGGAACTTAGAAGCTCTTCTAAAGCTTAGAAGATGACTGGCAAGTATGTTTCAGGGAGCCACATAAGACAGTTCCACTGCTA-ATAGCTATAAAAGCATGAAACCTGCATGAGAAAATGTGAGTTATTCT s panTro5.chr3 62418 798 - 202621043 TTACAAGAAAGTTCAA-CTGAAAATTGGTG-AAAGTTT-TGAAAAATCCAAAATTACTGTTTGTCCTGAGGAAGAGCTCTTACATAGTAACTCTAAAG-AGGGACAAAATTAAAGGAAGTGCCCTCTAACCCAATGAATCATATCCCTGA------CTGCAAGGAAGCAGATGCATCTTGGAGTGTCGAACTCTGTAGTATCCCAGGCATTGCCTGAACAGAAGGAGAACA-TCACAAACCTGTCTTTTCATTGTATTTATACTCTGGGTCCCTCAAACACACCTGCCAGTCATCTTCTAAGCTTTATTCAAATGAAAATAAATCAGACTGTAAAACTTGTAACTAACCAGACATGTAGCCTGTTTCT--CAGAGATG-------AAGAGAATTG-TTGTAATGATACAGAAATTGAAAAATTAGGGAAGCC---A---GTAGTTATGGTTGAAATGAAAGAGGACCAAGAGTTTGATATGCAAATGAC-AAAAAAATATAAACCAAAATACCGTTAATTGGAAATTAGACATTAGA-------CATTGGCCTCAGTCTAGAGATCCAAAAAGTCTGT-TTGATTTGTGGTTTGTTTACTCTAAAGAAATGAAGCATGTGATACAGATAGAAAGCCACAGTATTTCTGCTGTTACAGACACTTACAAAAACAAAAATCCAGTA-AGCACTTGTTCCACAAGCCATATGGAACTTAGAAGCTCTTCTAAAGCTTAGAAGATGACTGGCAAGTATGTTTCAGGGAGCCACATAAGACAGTCCCACTGCTA-ATAGCTATAAAAGCATGAAACCTGCATGAGAAAATGTGAGTTATTCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 57346 797 - 205426864 TTACAAGAAAGTTCAA-CTGAAAATTGGTG-AAAGTTT-TGAAAAATCCAAAATTACTGTTTGTCCTGAGGAAGAGCTCTTACATAGTAACTCTAAAG-AGGGACAAAATTAAAGGAAGTGCCCTCTAACCCAATGAATCATATCCCTGA------CTGCAAGGAAGCAGATGCATCTTGGAGTGTCGAACTCTGTAGTATCCCAGGCATTGCCTGAACAGAAGGAGAACA-TCACAAACCTGTCTTTTCATTGTATTTATACTCTGGGTCCCTCAAACACACCTGCCAGTCATCTTCTAAGCTTTATTCAAATGAAAATAAATCAGACTGTAAAACTTGTAACTAACCAGACATGTAGCCTGTTTCT--CAGAGATG-------AAGAAAATTG-TTGTAATGATACAGAAATTGAAAAATTAGGGAAGCC---A---GTAGTTATGGTTGAAATGAAAGAGGACCAAGAGTTTGATATGCAAATGAC-AAAAAAATATAAACCAAAATACCGTTAATTGGAAATTAGACATTAGA-------CATTGGCCTCAGTCTAGAGATCCAAAAAGTCTGT-TT-ATTTGTGGTTTGTTTACTCTAAAGAAATGAAGCATGTGATACAGATAGAAAGCCACAGTATTTCTGCTGTTACAGACACTTACAAAAACAAAAATCCAGTA-AGCACTTGTTCCACAAGCCATATGGAACTTAGAAGCTCTTCTAAAGCTTAGAAGATGACTGGCAAGTATGTTTCAGGGAGCCACATAAGACAGTCCCACTGCTA-ATAGCTATAAAAGCATGAAACCTGCATGAGAAAATGTGAGTTATTCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 75837 792 + 508821 TTACAAGAAAGTTCAA-CTGAAAATTGGTG-AAAGTTT-TGAAAAATCCAAAATTACTGTTTGTCCTGAGGAAGAGCTCTTACATAGTAACTCTAAAG-AGGGACAAAATTAAAGGAAGTGCCCTCTAACCCAATGAATCATATCCCTGA------CTGCAAGGAAGCAGATGCATCTTGGAGTGTCGAA------AGTATCCCAGGCATTGCCTGAACAGAAGGAGAACA-TCACAAACCTGTCTTTTCATTGTATTTATACTCTGGGTCCCTCAAACACACCTGCCAGTCATCTTCTAAGCTTTATTCAAATGAAAATAAATCAGACTGTAAAACTTGTAACTAACCAGACATGTAGCCTGTTTCT--CAGAGATG-------AAGAGAATTG-TTGTAATGATACAGAAATTGAAAAATTAGGGAACCC---A---GTAGTTATGGTTGAAATGAAAGAGGACCAAGAGTTTGATATGCAAATGACAAAAAAAATATAAACCAAAATACCGTTAATTGGAAATTAGACATTAGA-------CATTGGCCTCAGTCTAGAGATCCAAAAAGTCTGT-TTGATTTGTGGTTTGTTTACTCCAAAGAAATGAAGCATGTGATACAGATAGAAAGCCACAGTATTTCTGCTGTTACAGACACTTACAAAAACAAAAATCCGGTA-AGCACTTGTTCCACAAGCCATATGGAACTTAGAAGCTCTTCTAAAGCTTAGAAGATGACTGGC-AGTATGTTTCAGGGAGCCACATAAGACAGTCCCACTGCTA-ATAGCTATAAAAGCATGAAACCTGCATGAGAAAATGTGAGTTATTCT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 212950 789 - 123690457 TTACAAGAAAGTTCAA-CTGAAGGTTGGTG-AAAGTTT-TGAAAAATCCAAAATTACTGTTTGTCCTGAGGAAGAGCTCTTACATAGTAACTCTAAAG-AGGGACAAAATTAAAGGAAGTGCCCTCTAATCCAATGAATCATATCCCTGA------CTGCAAGGAAGCAGATGCATCTTGGAGTGTCGAACTCTGTAGTATCCCAGGCATTGCCTGAACAGAAGGAGCCCG-TCACAAACATGTCTTTTCATTGTATTTATACTCTGGGTCCCTCAAACACACCTGCCAGTCATCTTCTAAGCTTTATTCAAATGAAAATAAATCAGACTGTAAAACTTATAACTAACCAGACATGTAGCCTGTTTCT--CAGAGATG-------AAGAGAATTG-TTGTAATGATACAGAAATTGAAAAATTAAGGAACCC---A---GTAGTTATGGTTGAAATGAAAAAGGACCAAGAGTTTGATATGCAAATGAC-AAAAA----------AAAATACCGTTAATTGGAAATGAGACATTAGA-------CATCGGCTTCAGTCTAGAGATCCAAAAAGTCTGT-TTGATTTGTGGTTTGTTTAGTCCAAAGAAATGAAGCATATGATACAGATAGAAAGCCACAGTATTTCTGCTGTTACAGACACTTACAGAAACAAAAACCCATTACAGCACTTGTTCCACAAGCCATATGGAACTTAGAAGCTCTTCTAAAGCTTAGAAGATGACTGGCAAGTATGTTTCAGGGAGCCACATATGACAGTCCCACTTCTA-ATAGCTATAAAAGCATGAAACCTGCATGAGAAAATGTGAGTTATTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 43437 791 - 85730 TTACAAGGAAGTTCAA-CTGAAGATTGGTG-AAAGTTT-TGAAAAATCCAAAATTACTGTGTGTCCTGAGGAAGAGCTCTTACATAGCAACTCTGGAG-AGGGACAAAGTTAAAGGGAGTATCCTCTAATCTGATGAATCATATCCCTGA------CTGCAAGGAAGCAGATGCATCTTGGAGTGTCTAACTCTGTGGTATTCCAGGCATTGCCTAAACAGAAGGAGCCCA-TCACAAACATGTCTTTTCATTGCATTTATACTCTGGGTCCCTAAAACACACCTGTCAGTCATCTTCTAAGCTTTACACAAATGAAAATAAATCAGACTGTAAAAATTATAACAAACCAGACATGTAACCTGTTTCT--CAGAGATG-------AAGAGAATTG-TTGTAATGATACAGAAATTGAAAAATTAAGGAACCC---A---GTAGTTATGGTTGAAATGAAAGAAGATCAAGAGTTTGATATGCAAATGAC-AA-AAAATACAAACCAAAATACCACTAATTGGAA-------ATTAGA-------CATTGGCCTCAGTCTAGAGATCCAAAAAGTCTTT-TTGATTTGTGGTTTTCTCACTCCAAAGAAATGAGGCATGTGATACAGATAGAAAGCCACAGTATTTCTGCTGTTACAGACACTTACAAAAGCAAAAATCCAATACAGCGCTTGTTCCACAAGCCATATGGAACTTAGAAGCTCTTCTAAAGCTTAGAAGATGACTGGCAAGTGTGTTTCAGGGAGCCACATATGACAGTCCCACTGCTA-ATAGCTATAAAAGCATGAAACCCGAATGAGAAAATGTGAGTTATTCT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1452800 807 - 112612857 TTACAAAAAAGTTCAA-CTGAAGATTGGTG-AAAGTTT-TGAAAAATCCAAAATTACTGTTTGTCCTGAGGAAGAGCTCTTACATTGTAAACCTAAAG-TGGGACAAACTTAAAGGGAGTGCCCCGTAATCTCATGAATCATATCCCTGA------TGGTGAGGAAGCAGATGCA-CCTGGAGTGTCTAACTCTGTAGTATTCCAGGCATTGCCTGAACGGAACAAGCCCA-TCTCACTCAGGTCTTTTCGTTGCATTTATACTCTGGGTCCCTCAAACACACTTGCCAATCATCTTCTAAGCTTTATTCAAATGAAAATAAATCAGACTGTAAAAATTGTAACAAACCAGACATGTAGCCTGTTTCTCACAGAGATGAAGAAGAAAGAGAATTG-TTGTAATGATACAGAAGTTGAAAAATTAAGGAACCC---A---GTAGTTATGATTGAAATGAAAGAAGACCAAGAGTTTGATATGCAAATGAC-AAGAAAATATAACCCAAAATACCACAGATTGGAA-------ATTAGACATTAGGCATTGGCCTCAGTCTAGAAATCCAAAAAGTCTTT-TTGATTTGTGGTTTGCTCACTCCAAAGAATTGAAGCATGTGATGCAGATAGAAAGCCACAGTATTTCTGCTGTTACAGACACTTACAAAAACCGAAAACCAATACAGCGCTTGTTCCACAAGCCATATGGAACTTAGAAGCTCTTCTAAAGCTTAGAAGATGACTGGCAAGTGTGTTTCAGGGACCCACATGTGACAGTCCCACTGCTA-ATATCTATAAAAGCATGAAACCCGAATTAGAAAATGTGAGTTATTCT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 57047 791 + 4899514 TTACAAGGAAGTTCAA-CTGAAGATTGGTG-AAAGTTT-TGAAAAATCCAAAATTACTGTGTGTCCTGAGGAAGAGCTCTTACATAGCAACTCTGGAG-AGGGACAAAGTTAAAGGGAGTGTCCTCTCATCTGATGAATCACATCCCTGA------CTGCAAGGAAGCAGATGCGTCTTGGAGTGTCTAACTCTGTGGTATTCCAGGCATTGCCTAAACAGAAGGAGCCCA-TCACAAACATGTCTTTTCATTGCATTTATACTCTGGGTCCCTAAAACACACCTGTCAGTCATCTTCTAAGCTTTACACAAATGAAAATAAATCAGACTGTAAAAATTATAACAAACCAGACAGGTAACCTGTTTCT--CAGAGATG-------AAGAGAATTG-TTGTAATGATACAGAAATTGAAAAATTAAGGAACCC---A---GTAGTTATGGTTGAAATGAAAGAAGATCAAGAGTTTGATATGCAAATGAC-AA-AAAATCCAAACCAAAATACCACTAATTGGAA-------ATTAGA-------CATTGGCCTCAGTCTAGAGATCCAAAAAGTCTTT-TTGATTTGTGGTTTTCTCACTCCAAAGAAATGAGGCAGGTGATACAGATAGAAAGCCACAGTATTTCTGCTGTTACAGACACTTACAAAAGCAAAAATCCAATACAGCGCTTGTTCCACAAGCCATATGGAACTTAGAAGCTCTTCTAAAGCTTAGAAGATGACTGGCAAGTGTGTTTCAGGGAGCCACATATGACAGTCCCACTGCTA-ATAGCTATAAAAGCATGAAACCCGAATGAGAAAATGTGAGTTATTCT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 57044 791 + 97742 TTACAAGGAAGTTCAA-CTGAAGATTGGTG-AAAGTTT-TGAAAAATCCAAAATTACTGTGTGTCCTGAGGAAGAGCTCTTACATAGCAACTCTGGAG-AGGGACTAAGTTAAAGGGAGTGCCCTCTAATCTGATGAATCATATTCCTGA------CTGCAAGGAAGCAGATGCATCTTGGAGTGTCTAACTCTGTAGTATTCCAGGCATTGCCTAAACAGAAGGAGCCCA-TCACAAACATGTCTTTTCATTGCATTTATACTCTGGGTCCCTAAAACACACCTGTCAGTTATCTTCTAAGCTTTACACAAATGAAAATAAATCAGACTGTAAAAATTATAACAAACCAGACATGTAACCTGTTTCT--CAGAGATG-------AAGAGAATTG-TTGTAATGATACAGAAATTGAAAAATTAAGGAACCC---A---GTAGTTATGGTTGAAATGAAAGAAGATCAAGAGTTTGATATGCAAATGAC-AA-AAAATACAAACCAAAATACCACTAATTGGAA-------ATTAGA-------CATTGGCCTCAGTCTAGAGATCCAAAAAGTCTTT-TTGATTTGTGGTTTTCTCACTCCAAAGAAATGAGGCATGTGATACAGATAGAAAGCCACAGTATTTCTGCTGTTACAGACACTTACAAAAGCAAAAATCCAATACAGCACTTGTTCCACAAGCCATATGGAACTTAGAAGCTCTTCTAAAGCTTAGAAGATGACTGGCAAGTGTGTTTCAGGGAGCCACGTATGACAGTCCCACTGCTA-ATAGCTATAAAAGCATGAAACCCGAATGAGAAAATGTGAGTTATTCC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3707681 808 - 108555830 TTACAAAAAAGTTCAA-CTGAAGATTGCTGAAAAGTTT-TGAAAAATCCAAAATTACTGTTTGTCCTGAGGAAGAGCTCTTACATTGTAAACCTAAAG-AAGGACAAACTTAAAGGGAGTGCCCTGTAATCTGATGAATCATATCCCTGATAATATCCCTGAGGAAGCAGATAAA-CCTGGAGTGTCTTAACCTGTAGTATTCCAGGCATTGCCTGAACAGAACGAGCCCA-TCTCACTCAGGTCTTGTCATTGCCTTTACACTCGGGGTCCCTCAAACACACTTGCCAGTCATCTTCTAAGCTTTATTCAAATGAAAATAAATCAGATTGTAAAAATTGT----AACCAGACATGTCGCCTGTTTCTCACAGAGATGAAGAAGAAAGAGAATTG-TTGTAATGATACAGAAATTGAAAAATTAAGGAACCC---A---GTAGTTATGGCTGAAATGAAAGAAGACCAAGAGTTTGATATGCAAATGAC-AAGAAAATATAACCCAAAATACCACAGATTGGAAATTAGGCATTAGA-------CATTGGCCTCAGTCTAGAGATGCAAAAAGTC--T-TTGATTTGTGGTTTGCTCACTCCAAAGAATTGAAGCATGTAATATGGATAGAAAGCTACAGTATTTCTGCTGTTACAGACACTTACAAAAACCGAAAACCAATACAGCGCTTGTTCCACAAGCCATATGGAACTTAGAAGCTCTTCTAAAGCTTAGAAGATGACTGGCAAGTATGTTTCAGGGAGCCACATATGACAGTCCCACTGCTA-ATATCTATAAAAGCACGAAACCCAAATTAGAAAATGTGAGTTATTCT i chlSab2.chr12 I 301 C 0 s manLeu1.NW_012101680v1 57073 791 + 85016 TTACAAGGAAGTTCAA-CTGAAGATTGGTG-AAAGTTT-TGAAAAATCCAAAATTACTGTGTGTCCTGAGGAAGAGCTCTTACATAGCAACTCTGGAG-AGGGACTAAGTTAAAGGGAGTGCCCTCTAATCTGATGAATCATATTCCTGA------CTGCAAGGAAGCAGATGCATCTTGGAGTGTCTAACTCTGTAGTATTCCAGGCATTGCCTAAACAGAAGGAGCCCA-TCACAAACATGTCTTTTCATTGCATTTATACTCTGGGTCCCTAAAACACACCTGTCAGTCATCTTCTAAGCTTTACACAAATGAAAATAAATCAGACTGTAAAAATTATAACAAACCAGACATGTAACCTGTTTCT--CAGAGATG-------AAGAGAATTG-TTGTAATGATACAGAAATTGAAAAATTAAGGAACCC---A---GTAGTTATGGTTGAAATGAAAGAAGATCAGGTGTTTGATATGCAAATAAC-AA-AAAATACAAACCAAAATACCACTAATTGGAA-------ATTAGA-------CATTGGCCTCAGTCTAGAGATCCAAAAAGTCTTT-TTGATTTGTGGTTTTCTCACTCCAAAGAAATGAGGCATGTGATACAGATAGAAAGCCACAGTATTTCTGCTGTTACAGACACTTACAAAAGCAAAAATCCAATACAGCACTTGTTCCACAAGCCATATGGAACTTAGAAGCTCTTCTAAAGCTTAGAAGATGACTGGCAAGTGTGTTTCAGGGAGCCACGTATGACAGTCCCACTGCTA-ATAGCTATAAAAGCATGAAACCCGAATGAGAAAATGTGAGTTATTCT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1036105 788 - 1267912 TTACAAGAAAGTTCAA-CTGAAGATTGGTG-AAAGTTT-TGAAAAATCCAAAATTACTGTTTGTCCTGAGGAAGAGCTCTTACGTAGTAACTCTGGAG-AGGGATAAAGTTAAAGGGAGTGCCCTCTAATCTGATGAATCATATCCCTGA------CTGCAAGGAAGCAGATGCATCTTGGAGTGTCTAACTCTGTAGTATTCCAGGCATTGCCTAAACAGAAGGAGCCCA-TCACAAACATGTCTTTTCATTGCATTTATATTCTGGGTCCCTAAAACACACCTGTCAGTCATCTTCTAAGCTTTACACAAATGAAAATAAATCAGACTGTAAAAATTATAACAAACCAGACATGTAACCTGTTTCT--CAGAGATG-------AAGAGAATTGTTTGTAATGATACAAAAATTGAAAAATTAAAGAACCC---A---GTAGTTATGGTTGAAATGAAAGAAGATCAAGAGTTTGATATGCAAATGGC-AA-AAAATATAAACCAAAATACCACTAATTGGAA-------ATTAGA-------CATTGGCCTCAGTCTAGAGATCCAAAAAGTCTTT-TTGATTTGTGGTTTTCTCACTCCAAAGAAATGAGGCATGTGATACAGATAGAAAGCCACAGTATTTCTGCTGTT----ACACTTACAAAAGCAAAAATCCAATACAGCACTTGTTCCACAAGCCATATGGAATTTAGAAGCTCTTCTAAAGCTTAGAAGATGACTGGCAAGTATGTTTCAGGGAGCCACATATGACAGTCCCACTGCTA-ATAGCTATAAAAGCATGAAACCCGAATGAGAAAATGTGAGTTATTCT i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 25107 760 + 8899380 TTACA-AAAAATTCAA-CTGAAGATTGGTG-AAAGTTT-TGAAAAATCCAAAATTACTGTTTGTCCTGGGGAAGAGATCTTACAGAGTAACTCCAAAG-AGGGACAAACCTAAAGGGAGCGCCCTGTAATCTGATG--------------------------------------------GAGTGTCTAACTTTGTAGTATTCCAGGCATTGCCTGAACAGAAGGAGCCCA-TCTCAAACATGTCTTTGCATTACGTTTATACTCTGGATCCCTC-AACACATTTG-CAGTCATTTTCTAAGCTTTAGTCAAATGAAAATAAATCAGACTGTATAAATTATAACAAACCAGACATGTAGCCTGTTTTTCACAGAGGTG-------AAGAGAATTG-TTGTAATGATACAGAAATTGAAAAATTAAAGAACCC---A---CTGGTTATGGTTGAAACGAAAGAAGACCAAGAGTTTGATATGCAAATAAC-AA-AAAATATCAACCAAAATACTACTAATAGCAAATTAGACATTAGA-------CATTGGCCTCAGTCTAGAGATCCAAAAAGTCTTTGTTGATTTGTGGTTTGCTCACTCCAAAGTAATGGAGCATATGATACAGATAGAAAGCCCTAGTATTTCTGCTGTTAGAGACACTTAGAAAAATGGAAAACCAATACAGCACTTGTTCCACAAGCCATATGGAACTTAGAAGCTCTTCTAAAGCTTAGAAGGTGACTAGCAAGTGTGTTTCAGGGACCCACATGTGACAGTCCCACTGCTA-ATAGCTATAAAAGCATGAAACCTGAATTAGAAAATGTGAGTTATTCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4414631 789 + 4432243 TTACAGAAAAGTTCAA-CTGAAGATTGGTG-AAAATTT-TGAAAAATCCAAAATTACTGTTTGTCCTAAGGAAAAGCTCTTACATAGTAATTCTAAAG-AGGGACAAACTTAAAGGGAGTGCCCTGTAATCTGACGAATCACATCCCTGA------TTGTGAGGAAGCAGATGCATCTT-GAGTGTCTAACTCTGCATTATTCCAGGCATTGCCTGAACAGAAGGAGCCCA-TTTCAAACA--TCTTTTCATTGCATTTATACTCCAAGTTCCTG-AATACACTTGACAGTAATCTTTTAAGCTTTATTCAAATGAAAATAAATCAGACTATAAAAATTATAACAAATCAGACACATAGCCTGCTTCTCACAGAGATG-------AAGAGAATTG-TTGTAATGATACAGAAATTGAAAAATTAAAGAACCT---G---GTAGTTATGGTTGAAATGAAAGAAGACAGAGAGTTTGATAGGCAAATGAT------AATATAAACCAAAATACCACTAATAGGAAATTAGACATTAGA-------CATTGCCCTTGGTCTAGAAATCCAAAAAGTCTTCTTTAATTTGTGGTTTGCGCACTCCAGAGAAATGAAGTACATGATACAGATAGAAAGCCATGGTATTTCTGCTGTTACAGACAC----AAAGACAGAAAACCAATACAGCACTTGTTTCACAAGCCATATGGAGTTTAGAAGCTCTTCTAAAGCTTAGAAGGTAACTGGCAGGTGTGTTTCAAGGACCCACATATGACAGTCCCACTGCTA-ATAGCTATAAAAGCATTAAACCTGAATTAGAAAATGTGAGTTATTCT i cebCap1.NW_016107581v1 C 0 I 1285 s otoGar3.GL873538 19654344 728 - 27850971 TCACAAATGAATTAAAGCCAAAGAGTGGTG-AAAATTG-CGAAAAATATAAAATTTCTGCTTCTCCTGAGGAAAAGCCACTGCATA--AATCTAAGGG-AGGCGCAAACTTAAAGGAAATGCCCTCTAATTTGACAAATAATATACTTGA------TTTTGAGGGAAAAGATACTACCATGTGTGT----------GGTGTTTCAGGCATTTCCGGAACCGAAAGAATCTAGTTTCAAAAATGGCTTTCCATCTTCTTCATACTCTGAGTGCCTGGAATACCCCTGCCAGTCATCATCTAAGCTTTATTTAAATGAAAGTAAATTTGACAGTGGAAATATTAACAAACCAGACACTGAACATGTTTTTAACACAAGTG-------AA---AATTT-TTACAGTGATACAGAAACTAAAAATGTAAGGAACCCAGAA---GTAGTTGCAGATGAAATGGAAGAAGACCAAGAATTTGAAATGCAAATGAC-AG-AAAGTATGAACCAAAATACCACTAATTGGAAATTAGACATTGGA-------CATATACCTCAGTATAATGATTCAAAAAGTCTTT-TTGATTTCTGGCTTACCCCTTCCAAAGAAATGAAGCTTTTGAATAAAAAAAAATGGCACAGTATTTCTGTTGTAACAGATACTTCTAAGAAAACAAAGTCAATACAAGACGTGTTACAGAAGTCAT--------------------------------------------------------------TATATGATAATTGCAGTGCTA-ATCAGTGTGAAAGCATGAAACCTGAATTAGAAAATGTGAGTTCTTCC i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79106983 716 - 85426708 TTAGCAGAGAGTTAAAGCAGAAGTTTGGTT-TAAATTTGTGAAAAATAACAAATTACTACTTATCCTGAGGAAGAGCCACTACATGCTGACTCTAAAGTAGGAGCAGACTTAAAGGCAATACCATCTAATTTGTCAAATATTACACTTGA------TTGTGAGGAAAAAGATGAA-TTTGGAGTGTCTGTCTCTGTAGTATCTCAGGCCTTCCCTGAATAAAAAGAGTCTAGTCTCAAAAATGTCATTCTCTCTCATT--CACTTTGGGTCCCTGGACTGTGCTTGCCAGTCA---TCTAAGCTTTCTTTACATGAAAATAAATCAGACTTTAAAAATGATAACAAACCA---ATTGAGCATGTTTGTAACAAAAATA----------AGAGTTT-TTATAATGATACTGAAAATAAAAAAGTAAGGAACCC---A---CTAGTTACATGTGAAATGAAAGAAGACCAAGAGTTTGACATGCAGATGGC-CG-AAAATATGAACCAAAATACTACTATTTGTAAATTAGACACTGGG-------TATATCCCTCTGTATAGTGACCCAGAAAGCCTTT-TTGATTTGTGGCTTGCTCACTCCAATGTGATGAAACAAATGATTCAAATGAAAAGGCATGATACTTCTGCTATTACAAACAC----AAGAAAACAAAACCAATACAAGACTTGTTCTAGAAGCCAT--------------------------------------------------------------TATATG-CAG-------GCTATAAAACTATAAAAGTATGGAACCTGAATTAGAAAACATGAGTTCT--- i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1730691 737 - 2296528 TCACAAATGAGTTAAAGCAGAAGTTTGGTG-AAATTTG-TGAAAAATACAAAATTACTGCTTGTCCTGAGGAAGCACCACTATATGACAACTCTAACG---GAGCAAACTTAAAGGAAATATCCTCTAATTTGACAAATAATATACTTGA------TTATGAGGAAAAAGATGCA-CTTGGAGTGTCTCTTTCTGTTGTATTCCAGGCATTTCCTGAACAAAGAGAACCCAGTCTCGGAAATGTCTTTTCATCTCATTTATACTCTGGGCCCCAGGGATATGTTTGCCCGTCATCTTCTAAACTTTATTTAAATGATAATAAATTAGACTATGAAAATTATTATAAACCAGACCCTGGACATATTTTTAACAAAAATG----------AGAGTTT-TTGTAATGATGCAGAAAATAAAACTGTAAAGAATCC---AGATGTAGTTACAGTTGAAATGAAAGAAGACCAAGAGTTTGATATGCAAATGAC-AA-AAAATATGAACCAAAACACCATGAATTGGAAATTAGACACTGGA-------CATATATCTCAGTCTAGTGATCCCAAAAACCTTT-ATGATTTGTGGCTTACCCGTTCCAATGAAATGAAACATATGATTCAAACAAAAAAGCGCACTATTTCGTCTGTTACAAACACTTTTGAGAAAACAAAGCCAATGGAATACTTGTTCCAGAAGCCAT--------------------------------------------------------------CACATGATAATTGCTGTGCTA-ATGACTATAAAAGCATGGAACCTGAATTAGAAAATGTGAGTTCTTCT i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46482530 23 - 47448759 I a score=65211.000000 s hg38.chr3_KI270784v1_alt 170336 9 + 184404 CCACCCCAT s panTro5.chr3 63216 9 - 202621043 CCACCCCAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 58143 9 - 205426864 CCACCCCAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 76629 9 + 508821 CCACCCCAT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 213739 9 - 123690457 CCACCCCAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 44228 9 - 85730 CCACTCCGT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1453607 9 - 112612857 CCACCACAT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 57838 9 + 4899514 CCACTCCGT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 57835 9 + 97742 CCACTCCGT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3708489 9 - 108555830 CCACCACAT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 57864 9 + 85016 CCACTCCGT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1036893 9 - 1267912 CCACCCCGT i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 25867 9 + 8899380 TCACCACTT i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19655072 9 - 27850971 CCTCCACAT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79107699 9 - 85426708 TTACCTCAT i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1731428 9 - 2296528 CCACCATAT i dasNov3.JH570393 C 0 C 0 e cebCap1.NW_016107581v1 4415420 1285 + 4432243 I e calJac3.chr18 46482530 23 - 47448759 I a score=347634.000000 s hg38.chr3_KI270784v1_alt 170345 43 + 184404 AGTGACAGAACATCAAAAGCATATCTA---------------------------------GAAG--------------AAGACTTACAGC s panTro5.chr3 63225 43 - 202621043 AGTGACAGAACATCAAAAGCATATCTA---------------------------------GAAG--------------AAGACTTACAGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 58152 43 - 205426864 AGTGACAGAACATCAAAAGCATATCTA---------------------------------GAAG--------------AAGACTTACAGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 76638 43 + 508821 AGTGACAGAACATCAAAAGCATATCTA---------------------------------GAAG--------------AAGACTTACAGC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 213748 43 - 123690457 AGTGACAGAACATCAAAAGCATATCTA---------------------------------GAAG--------------AAGACTTACAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 44237 40 - 85730 AGTGACAGAACATCAAAAGCATAGCT------------------------------------AG--------------AAGACTTACAGC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1453616 43 - 112612857 AGTGACAGAACATCAAAAGCATATCTA---------------------------------GAAG--------------AAGACTTACAGC i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 57847 40 + 4899514 AGTGACAGAACATCAAAAGCATAGCT------------------------------------AG--------------AAGACTTACAGC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 57844 40 + 97742 AGTGACAGAACATCAAAAGGATATCT------------------------------------AG--------------AAGACTTACAGC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3708498 40 - 108555830 AGTGACAGAACATCAAAAGCATATCT------------------------------------AG--------------AAGACTTACAGC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 57873 40 + 85016 AGTGACAGAACATCAAAAGGATATCT------------------------------------AG--------------AAGACTTACAGC i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1036902 37 - 1267912 ACTGACAGAACACCAAAAGCATATCT-----------------------------------------------------AGACTTACAGC i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 25876 90 + 8899380 AGTGACAGAACATCAAAAGCATATCTACCTTGCCAGTCATCTTCTAAGCTTTATTCAAAGGAAAATAAATCAGACTGTAAAAATTATAGC i saiBol1.JH378197 C 0 I 28 s cebCap1.NW_016107581v1 4416705 43 + 4432243 AGTGACAGAACATCAAAAACATATCTA---------------------------------GAAG--------------AAGACTTACAGC i cebCap1.NW_016107581v1 I 1285 I 155 s otoGar3.GL873538 19655081 43 - 27850971 AGCTACAGAACATCAAAAATAGATCTA---------------------------------AAAG--------------AAGAATTGCAGC i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79107708 43 - 85426708 AGTTTCAGAACATCAGAAGTATATCTA---------------------------------AAAG--------------AAGAATGACAGC i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1731437 43 - 2296528 TGTGACAGAGCATCAAAAGTATATCTA---------------------------------AATG--------------AAGAATTACAGC i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46482530 23 - 47448759 I a score=53850.000000 s hg38.chr3_KI270784v1_alt 170388 5 + 184404 AAGAT s panTro5.chr3 63268 5 - 202621043 AAGAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 58195 5 - 205426864 AAGAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 76681 5 + 508821 AAGAT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 213791 5 - 123690457 AAGAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 44277 5 - 85730 AAGAT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1453659 5 - 112612857 AAGAT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 57887 5 + 4899514 AAGAT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 57884 5 + 97742 AAGAT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3708538 5 - 108555830 AAGAT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 57913 5 + 85016 AAGAT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1036939 5 - 1267912 AAGAT i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 25994 5 + 8899380 GAGAT i saiBol1.JH378197 I 28 I 2 s otoGar3.GL873538 19655124 5 - 27850971 AAGAT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79107751 5 - 85426708 AAGAT i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1731480 5 - 2296528 AAGAT i dasNov3.JH570393 C 0 C 0 e cebCap1.NW_016107581v1 4416748 155 + 4432243 I e calJac3.chr18 46482530 23 - 47448759 I a score=917574.000000 s hg38.chr3_KI270784v1_alt 170393 94 + 184404 ATGCAAAGGCTTAAGAATGAGGTGGGCATGTTACAAGTAGAGTTCCTGGCTTTGAAGAAA--GAAAG--CTTAACTATAAAAAGAA--AGAGGTTCACTT s panTro5.chr3 63273 94 - 202621043 ATGCAAAGGCTTAAGAATGAGGTGGGCATGTTACAAGTAGCGTTCCTGGCTTTGAAGAAA--GAAAG--CTCAACTATAAAAAGAA--AGAGGTTCACTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 58200 94 - 205426864 ATGCAAAGGCTTAAGAATGAGGTGGGCATGTTACAAGTAGCGTTCCTGGCTTTGAAGAAG--GAAAG--CTCAACTATAAAAAGAA--AGAGGTTCACTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 76686 94 + 508821 TTGCAAAGGCTTAAGAATGAGGTGGGCATGTTACAAGTAGAGTTCCTGGCTTTGAAGAAA--GGAAG--CTCCACTATAAAAAGAA--AGAGGTTCACTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 213796 94 - 123690457 ATGCAAAGGCTTAAGAATGAGGTGGGCATGTTACAAGTAGAGTTCCTGGCTTTGAAGAAA--GAAAG--TTCAACTATAAAAAGAA--AGAGGTTCACTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 44282 92 - 85730 ATGCAAAGGCTTAAGAATGAGGTGGGCATGTTACAAGCAGAGTTCCTGGCTTTGAAGAAA--GAAAG--TTCAAGTATAAAAAGAA----AGGTTCACTT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1453664 93 - 112612857 ATGCAAAGGCTTAAGAATGAGGTGGGCTTGTTACAAGTAGAGGTCCTGGCTTTGAAGAAA---AAAG--TTCAACTATAAAAAGAA--AGAGGTTCCCTT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 57892 94 + 4899514 ATGCAAAGGCTTAAGAATGAGGTGGGCATGTTACAGGCAGAGTTCCTGGCTTTGAAGAAA--GAAAG--TTCAAGTATAAAAAGAA--AGAGGTTCACTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 57889 94 + 97742 ATGCAAAGGCTTAAGAATGAGGTGGGCATGTTACAAGCAGAGTTCCTGGCTTTGAAGAAA--GAAAG--TTCAACTATAAAAAGAA--AGAGGTTCACTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3708543 94 - 108555830 ATGCAAAGGCTTAAGAATGAGGTGAGCTTGTTACAAGTAGAGGTCCTGGCTTTGAAGAAA--AGAAG--TTCAACTATAAAAAGAA--AGAGATTCCCTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 57918 94 + 85016 ATGCAAAGGCTTAAGAATGAGGTGGGCATGTTATAAGCAGAGTTCCTGGCTTTGAAGAAA--GAAAG--TTCAACTATAAAAAGAA--ATAGGTTCACTT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1036944 94 - 1267912 ATGCAAAGGCTTAAGAATGAGGTGGGCATGTTACAAGCAGAGTTCCTGGCTTTGAAGAAA--GAAAG--TTCAACTATAAAAAGAA--AGAGGTTCATTT i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 26001 93 + 8899380 ATGCAAAGGCTTAAGAATGAGGTGGGCATGCTACAAATAGAGTTCCTGGCTTTGAAG-AA--GAAAG--TTTAACTATAAAACGAA--AGAGGTTCACTT i saiBol1.JH378197 I 2 I 318 s cebCap1.NW_016107581v1 4416903 93 + 4432243 ATGTAAAGGCTTAAGAATGAGGTGGGTATG-TACAAATGGAGTTCCTGTCTTTGAAGAAA--GAAAG--TTCAACTATAAAATGAA--AGAGGTTCACTT i cebCap1.NW_016107581v1 I 155 C 0 s otoGar3.GL873538 19655129 98 - 27850971 ATGCAAAGGTTTAAGAATGAGATAGGCATGTTAAAAGTAGAGTTCCTGGCTTTGGAGAAA--GAAAAATTTCAACTTCAAAAAGAGGTAGAGGTTTACTT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79107756 82 - 85426708 ATGCAAAGCTTTAAGAATGAGAAAAGCATGTTACAAGTAGAACTCCTG---------------AAAG--TTCAACTTCCAAAAGAG-CTGCTGCTCTTTT i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1731485 98 - 2296528 ATGCAAAGGTTTAAGAATGAGATAGGCATGTTACAAGTAGAGTTCCGGGCTTTGGAAAAAGAGAAAG--CTCAACTTCAAAAAGAGGTAGAGGTTCACTT i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46482530 23 - 47448759 I a score=1396876.000000 s hg38.chr3_KI270784v1_alt 170487 155 + 184404 GCTGC----------T-----------TCTCTTTTTATAAAT-TATCTGATTCATTCTGGTTTTCTACTCAAGA--AAATCTCATGTGTCTAGTTACAGTGTGGTTATCTAAATGCATAATTATGTGTCTAAGTAGATCAGTGCTGCTATCT-AAATG---A-C---AGTTCTGGAAAACACTCTCA s panTro5.chr3 63367 155 - 202621043 GCTGC----------T-----------TCTCTTTTTATAAAT-TATCTGATTCATTCTGGTTTTCTACTCAAGA--AAATCTCATGTGTCTAGTTACAGTGTGGTTATCTAAATGCATAATTATGTGTCTAAGTAGATCAGTGCTGCTATCT-AAATG---A-C---AGTTCTGGAAAACACTCTCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 58294 155 - 205426864 GCTGC----------T-----------TTTCTTTTTATAAAT-TATCTGATTCATTCTGGTTTTCTACTCAAGA--AAATCTCATGTGTCTAGTTACAGTGTGGTTATCTAAATGCATAATTATGTGTCTAAGTAGATCAGTGCTGCTATCT-AAATG---A-C---AGTTCTGGAAAACACTGTCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 76780 155 + 508821 GCTGC----------T-----------TCTCTTTTTATAAAT-TATCTGATTCATTCTGGTTTTCTACTCAAGA--AAATCTCATGTGTCTAGTTACAGTGTGGTTATCTAAATGCATAATTATGTGTCTAAGTAGATCAGTGCGGCTATCT-AAATG---A-C---AGTTCTGGAAAACACTCTCA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 213890 155 - 123690457 GCTGC----------T-----------TCTCTTTTTATAAAT-TATCTGATTCATTCTGGTTTTCTACTCAAGA--AAATCTCATGTGTATAGTTACAGTGTGGTTATCTAAATGTGTAATTATGTGTCAAAGTAGATCAGTGCTGCTATCT-AAATG---A-C---AGTTCTGGAAAACACTCTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 44374 155 - 85730 GCTAC----------T-----------TCTCTTTTTATAAAT-TATCTGATTCATTCTGGTTTTCTACTCAAGA--AAATCTCATGTGTATAGTTACAGTGGGGTTATCTAAATGCGTAATTATGTGTCAAAGTAGATTAGTGCTGCTATCT-AAATG---A-C---AGTTCTGGAAAACATTCTCA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1453757 155 - 112612857 GCTGC----------T-----------TCTCTTATTATAAGT-TATCTGATTCATTCTGGTTTTCTACTCAAGA--AAATCTCATGTGTATGGTTACAGTGGGGTTATCTAAATGTGTAATTACGTGTCAAAGTAGATTAGTGCTGCTATCT-AAATG---A-C---AGTTCTGGAAAACATTCTCA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 57986 157 + 4899514 GCTAC----------T-----------TCTCTTTTTATAAAT-TATCTGATTCATTCTGGTTTTCTACTCAAGA--AAATCTCATGTGTATAGTTACAGTGGGGTTATCTAAATGCGTAATTATGTGTCAAAGTAGATTAGTGCTGCTATCTAAAATG---ACC---AGTTCTGGAAAACATTCTCA i macNem1.NW_012020287v1 C 0 I 58 s cerAty1.NW_012005170v1 57983 155 + 97742 GCTAC----------T-----------TCTCTTTTTATAAAT-TATCTGATTCATTCTGGTTTTCTACTCAAGA--AAATCTCATGTGTTTAGTTACAGTGGGGTTATCTAAATGTGTAATTATGTGTCAAAGTAGATTAGTGCTGCTATCT-AAATG---A-C---AGTTCTGGAAAACATTCTCA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3708637 155 - 108555830 GCTGC----------T-----------TCTCTTATTATAAGT-TATCTGATTCTTTCTGGTTCTCTACTCAAGA--AAATCTCATGTGTATAGTTACAGTGGGGTTATCTAAATGTATAGTTACGTGTCAAAGTAGATTAGTGCTGCTATCT-AAATG---A-C---AGTTCTGGAAAACATTCCCA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 58012 155 + 85016 GCTAC----------T-----------TCTCTTTTTATAAAT-TATCTGATTCATTCTGGTTTTCTACTCAAGA--AAATCTCATGTGTTTAGTTACAGTGGGGTTATCTAAATGTGTAATTATGTGTCAAAGTAGATTAGTGCTGCTATCT-AAATG---A-C---AGTTCTGGAAAACATTCTCA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1037038 155 - 1267912 GCTAC----------T-----------TCTCTTTTTATAAAT-TATCTGATTCATTCTGGTTTTCTACTCAAGA--AAATCTCATGTGTATAGTTACAGTGGAGTTATCTAAATGTGTAATTATGTGTCAAAGTAGATTAGTGCTGCTATCT-AAATG---A-C---AGTTCTGGAAAACATTATCA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 26412 154 + 8899380 GCTGC----------T-----------TCTCTTTTTATAAACTTATCTGATTCGTTCTGCTTTTCTATTCAAGA--AAAT--TTTGTTTTTAGTTACAGTGGTGTTATCCAAATGTGTAATTATGTGTCAAAGTAGATTAGTACTGCTATCT-AAATG---A-C---AGTTCTGGAAAACATTCTCA i saiBol1.JH378197 I 318 C 0 s cebCap1.NW_016107581v1 4416996 155 + 4432243 GCTGC----------T-----------TCTCTTTTTATAAAC-TATCTGATTTATTTTGGTTTTCTACTCAAGA--AAATGACATGTGTATAGTTACAGAGGGATTATCTAAATGTATGATTATGTGTCAAAGTAGATCAGTGCTGCTATCT-AAATG---A-C---AGTTCTGGAAAACATTCTCA i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19655227 162 - 27850971 GCTGCTACTCTTTGTT-----------TTTCTTTGTATCCCT-TTTCTGACTAAGTCTGATTTTTTACTTATGA--AAAACTCTTGTG------TAGAATGAGGTTATATAAATACATAATTGTATATAGAAGTAGATTATTTCTGCAGTCT-GATAGTAAG-T---AGTTCAGGAAAATATTCTTG i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79107838 145 - 85426708 -GTTT----------T-----------TTCCTCTTTATCAAT-TATCTGAGCCAATTTGATTTTCCACTTATGAAGAAAGCTCATGTATAAAAT-------GGGTTGTCTCAATATATAATTGTGTTTGGAAATAGATTATTTCTGCTATCT-AAATG---A-T---AGGAATGCAAGAAAAT---- i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1731583 162 - 2296528 ACTGC----------TATTCTTTATTGTTTCTCCTTATCATT-TATCTGATCCATTCTGATTTTCCACTTAGGA--AAAGCGCA-GTG------TAAAATGGGGTTGTTTAAATACGTAATTGTGTCTAGAAAGAGATGATTTCTGCAGTCT-AGATA---A-TTGGAGTTCTGGAAAAGATTCTCA i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46482530 23 - 47448759 I a score=372064.000000 s hg38.chr3_KI270784v1_alt 170642 50 + 184404 TAATCTTTGTTCATTAGTCAACCTGAGTCTCACTATCAGTCTTCCAAGTG s panTro5.chr3 63522 50 - 202621043 TAGTCTTTGTTCATTAGTCAACCTGAGTCTCACTATCAGTCTTCCAAGTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 58449 50 - 205426864 TAGTCTTTGTTCATTAGTCAACCTGAGTCTCACTATCAGTCTTCCAAGTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 76935 50 + 508821 TAATCTTTGTTCATTAGTCAACCTGAGTCTCACTATCAGTCTTCCAAGTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 214045 50 - 123690457 TAATCTTTGTTCATTAGTCAACCTAAGTCTCACTATCAGTCTTCCAAGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 44529 50 - 85730 TAATATTTGTTCATTAGTCAACCTAAGTCTCACTATCAGTCTTCCAAGTA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1453912 50 - 112612857 TAATCTTTGATCATTCATCAACCTAAGTCTCACTATGAGTCTTCCAAGTG i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 58138 50 + 97742 TAATATTTGTTCATTAGTCAACCTAAGTCTCACTATCAGTCTTCCAAGTA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3708792 50 - 108555830 TAATCTTTGCTCATTCATCAACCTAAGTCTCACTATGAGTCTTCCAAGTG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 58167 50 + 85016 TAGTATTTGTTCATTAGTCAACCTAAGTCTCACTATCAGTCTTCCAAGTA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1037193 50 - 1267912 TAATATTTGTTTATTAGTCAACCTAAGTCTCACTATCAGTCTTCCAAGTA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 26566 47 + 8899380 TAATCTTTGTACATTAGTCAACCTAAGTCTCACT---AGTCTTCCAAGTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4417151 50 + 4432243 TAATCTTTGTTCATTAGTCAACCTAAGTCTCACTGTCAATCTTCCAAGTG i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19655389 50 - 27850971 GAATATTTGTTCCATAATCAACCCACGTATCTCAATCAGTCTTCTAACTG i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79107983 39 - 85426708 --ATATTTGTTTTC-------CTTAAGTTT--CTTTCAGTTTCCCAAGTG i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1731745 35 - 2296528 TAATTTGTGTCC-TTAGTTAACCT--------------GTCTTCCAAGTG i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46482530 23 - 47448759 I e macNem1.NW_012020287v1 58143 58 + 4899514 I a score=695127.000000 s hg38.chr3_KI270784v1_alt 170692 82 + 184404 GCACATGGGCTGGG-AAAATAATTTAGCCATATGCCATGTGACCTTCTGAATCA-GCTAAA-CATAAAGAAAATTGCTAAA-------GAAA------ s panTro5.chr3 63572 82 - 202621043 GCACATGGGCTGGG-AAAATAGTTTAGCCATATACCATGTGACCTTCTGAATCA-GCTAAA-CATAAAGAAAATTGCTAAA-------GAAA------ i panTro5.chr3 C 0 C 0 s panPan2.chr3 58499 82 - 205426864 GCACATGGGCTGGG-AAAATAGTTTAGCCATATACCATGTGACCTTCTGAATCA-GCTAAA-CATAAAGAAAATTGCTAAA-------GAAA------ i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 76985 82 + 508821 GCACATGGGCTGGG-AAAATAATTTAGCCGTATACCATGTGACCTTCTGAATCA-GCTAAA-CATAAAGAAAATTGCTAAA-------GAAA------ i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 214095 82 - 123690457 GCACATGGGCTGGG-AAAATAATTTAGCCATGTACCATGTGACCTTCTGAATCA-GCTAAA-CATAAAGAAAATTGCTAAA-------GAAA------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 44579 82 - 85730 GCACATGGCCTGGG-AAAATAATTTAGCCATATACCATGTGACTTTCTGAATCA-GCTAAA-CATAAAGAAAATTGCTAAA-------GAAA------ i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1453962 79 - 112612857 GCATATGGGCTGGG-AAAATTATTTAGCGATATACCATGTGA---TCTGAACCA-GATAAG-CATAAGGAAAATTGCTAAA-------GAAA------ i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 58201 82 + 4899514 GCACATGGCCTGGGAAAAATAATTTAGCCATA-ATCATATGACTTTCTGAA-CA-GCTAAGACATAAAGAAAATTGCTAAA-------GAAA------ i macNem1.NW_012020287v1 I 58 C 0 s cerAty1.NW_012005170v1 58188 82 + 97742 GCACATGGCCTGGG-AAAATAATTTAGCCATATACCATGTGACCTTCTGAATCA-GCTAAA-CATAAAGAAAATTGCTAAA-------GAAA------ i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3708842 82 - 108555830 GCATATGGGCTGGG-AAAATTATTTAACCATATACCATGTGACCTTCTGAACTA-GATAAG-CATAAGGGAAATTGCTAAA-------GAAA------ i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 58217 82 + 85016 GCACATGGCCTGGG-AAAATAATTTAGCCATATACCATGTAACCTTCTGAATCA-GCTAAA-CATAAAGAAAATTGCTAAA-------GAAA------ i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1037243 82 - 1267912 GCACATGGCCTGGG-AAAATAATTTAGCCATATACCATGTGACCTTCTGAATCA-GCTAAA-CATAAAGAAAATTGCTAAA-------GAAA------ i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 26613 75 + 8899380 GCATATGGGCTGGG-AAAATAATTTAGC-------CGTGCGACCTTCTGAACCA-GATAAG-TATAAAAGAAGTTGCTAAA-------GAAA------ i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4417201 75 + 4432243 GCATATGGGCTGGG-AAAATAATTTAGC-------CATGTGACCTTCTGAACCA-GATAAG-CATAAAAGAAATTGCTAAA-------GAAA------ i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19655439 85 - 27850971 TCCTGTGAGCTGAG-AAAA-----TAGCCATATGCTATATGGCCTTCAGAACTAGGTTAAG-CATAAAGGTAATTGCTAAAAGAGAAGGCAA------ i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79108022 83 - 85426708 GTGTATGAACTGGG-AAGCTGATTTAGCTATGCACCCTGTGACTTCATGAACCAAAATAAC-CATAGAGAATATTGCTGTA-------AAAA------ i canFam3.chr2 C 0 I 233 s dasNov3.JH570393 1731780 89 - 2296528 GCATATGAACTGGG-AAACTAATTTACTTAGATACCATGTGTCTTTCTGAACCAGGATAAG-CATTAAGGAAGTTGCGGAA-------AAGAAAATAA i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46482530 23 - 47448759 I a score=71561.000000 s hg38.chr3_KI270784v1_alt 170774 9 + 184404 TAAGCTCTA s panTro5.chr3 63654 9 - 202621043 TAAGCTCTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 58581 9 - 205426864 TAAGCTCTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 77067 9 + 508821 TAAGCTCTA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 214177 9 - 123690457 TAAGCTCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 44661 9 - 85730 TAAGGTCTA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1454041 9 - 112612857 TAATGTCTA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 58283 9 + 4899514 TAAGTCCTA i macNem1.NW_012020287v1 C 0 I 328 s cerAty1.NW_012005170v1 58270 9 + 97742 TAAACTCTA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3708924 9 - 108555830 TAATGTCTA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 58299 9 + 85016 TAAGCTCTA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1037325 9 - 1267912 TAAGCTCTA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 26688 9 + 8899380 TAAGCTCTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4417276 9 + 4432243 TAAGCTCTA i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19655524 9 - 27850971 TGAGCTATA i otoGar3.GL873538 C 0 I 1 s dasNov3.JH570393 1731869 9 - 2296528 TAAGCTTTT i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79108105 233 - 85426708 I e calJac3.chr18 46482530 23 - 47448759 I a score=29471.000000 s hg38.chr3_KI270784v1_alt 170783 5 + 184404 ----GATTC s panTro5.chr3 63663 5 - 202621043 ----GATTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 58590 5 - 205426864 ----GATTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 77076 5 + 508821 ----GATTC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 214186 5 - 123690457 ----GATAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 44670 5 - 85730 ----GATTC i rheMac8.chrUn_NW_014858614v1 C 0 I 331 s macFas5.chr15 1454050 5 - 112612857 ----GATTC i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 58620 5 + 4899514 ----GATTC i macNem1.NW_012020287v1 I 328 C 0 s cerAty1.NW_012005170v1 58279 5 + 97742 ----GAttc i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3708933 5 - 108555830 ----GATTC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 58308 5 + 85016 ----GAttc i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1037334 5 - 1267912 ----GATTC i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 26697 5 + 8899380 ----GATTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4417285 5 + 4432243 ----GATTC i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19655534 4 - 27850971 ----GGTT- i otoGar3.GL873538 I 1 I 1 s dasNov3.JH570393 1731878 5 - 2296528 AAGCG---- i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79108105 233 - 85426708 I e calJac3.chr18 46482530 23 - 47448759 I a score=30936.000000 s hg38.chr3_KI270784v1_alt 170788 5 + 184404 TTCTT- s panTro5.chr3 63668 5 - 202621043 TTCTT- i panTro5.chr3 C 0 C 0 s panPan2.chr3 58595 5 - 205426864 TTCTT- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 77081 5 + 508821 TTCTT- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 214191 5 - 123690457 TTCTT- i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 45006 5 - 85730 TTCTT- i rheMac8.chrUn_NW_014858614v1 I 331 C 0 s macFas5.chr15 1454055 5 - 112612857 TTTTT- i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 58625 5 + 4899514 TTCTT- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 58284 5 + 97742 ttctt- i cerAty1.NW_012005170v1 C 0 I 262 s chlSab2.chr12 3708938 5 - 108555830 TTTTT- i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 58313 5 + 85016 ttctt- i manLeu1.NW_012101680v1 C 0 I 260 s colAng1.NW_012116822v1 1037339 5 - 1267912 TTCTT- i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 26702 5 + 8899380 TTTTT- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4417290 4 + 4432243 -TTTT- i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19655539 4 - 27850971 TTCT-- i otoGar3.GL873538 I 1 I 2 s dasNov3.JH570393 1731883 6 - 2296528 TTATTT i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79108105 233 - 85426708 I e calJac3.chr18 46482530 23 - 47448759 I a score=4340.000000 s hg38.chr3_KI270784v1_alt 170793 4 + 184404 --ACTG s panTro5.chr3 63673 4 - 202621043 --ACTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 58600 4 - 205426864 --ACTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 77086 4 + 508821 --ACTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 214196 4 - 123690457 --AGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 45011 4 - 85730 --ACTG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1454060 4 - 112612857 --TCTA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 58630 4 + 4899514 --ACTG i macNem1.NW_012020287v1 C 0 C 0 s chlSab2.chr12 3708943 4 - 108555830 --TCTA i chlSab2.chr12 C 0 C 0 s colAng1.NW_012116822v1 1037344 4 - 1267912 --ACTG i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 26707 4 + 8899380 --TCTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4417294 4 + 4432243 --TCCG i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19655545 4 - 27850971 --TCCC i otoGar3.GL873538 I 2 C 0 s dasNov3.JH570393 1731889 4 - 2296528 TTTC-- i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79108105 233 - 85426708 I e calJac3.chr18 46482530 23 - 47448759 I e cerAty1.NW_012005170v1 58289 262 + 97742 I e manLeu1.NW_012101680v1 58318 260 + 85016 I a score=589033.000000 s hg38.chr3_KI270784v1_alt 170797 88 + 184404 TA-TTCATTTAAAGATGACTTACATTTATTTAAATGATAAAATGGTAACACGATGGGAGGGAAACAATGACT--GAGAAGAGACATGAAAA s panTro5.chr3 63677 88 - 202621043 TA-TTCATTTAAAGATGAATTACATTTATTTAAATGATAAAATGGTAACACGATGGGAGGGAAACAATGACT--GAGAAGAGACATGAAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 58604 88 - 205426864 TA-TTCATTTAAAGATGAATTACATTTATTTAAATGATAAAATGGTAACACGATGGGAGGGAAACAATGACT--GAGAAGAGACATGAAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 77090 88 + 508821 TA-TTCATTTAAAGATGAATTACATTTATTTAAATGATAAAATGGTAACACGATGGGAGGGAAACAATGACT--GAGAAGAGACATGAAAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 214200 83 - 123690457 TA-TCCATTTAAAGATGAATTACATTTATTTAAATGATAAAATGGTAACACAATGGGAGGGAAACAATGACT-------GAGACATGAAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 45015 88 - 85730 TA-TTCATTTAAAGATGAATTACATTTACTTAAATGATAAAATGGTAACACAATGGGAGGGAAACAATGACT--GAGAAGAGACTTGAAAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1454064 88 - 112612857 TA-TTCATTTAAAGATGAATTACATTTATTTAAATGATAAAATGGTAATACAATAGGAGGGAAGCAGTGACT--GAGAAGAGACATGAAAA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 58634 89 + 4899514 TATTTCATTTAAAGATGAATTACATTTACTTAAATGATAAAATGGTAACCAATTTGGAGGGAAACAATGACT--GAGAAGAGACTTGAAAA i macNem1.NW_012020287v1 C 0 I 26 s chlSab2.chr12 3708947 88 - 108555830 TA-TTCATTTAAATATGAATTACATTTATTTAAATGATAAAATGGTAACACAATGGGAGGGAAACAATGACT--GAGAAGAGACTTGAAAA i chlSab2.chr12 C 0 C 0 s colAng1.NW_012116822v1 1037348 81 - 1267912 TA-TTCATTTAAAGATGAATTACATTTATTTAAATGATAAAATGGTAACACAAT-------AAACAATGACT--GAGAAGAGACTTGAAAA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 26711 88 + 8899380 TA-CTGATTTAAAGATGAATTCGATTTATTTAAATAATAAAATGGTAATACAATGGGAGGGAAGCACTGACT--AAGAAGAGACCTGAAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4417298 88 + 4432243 TA-CTGATTTAAAGATGAATTAGATTTATTTAAATAATAAAATGGTAATACAATGAAAGGGAAGCAATGACT--GAGAAGAAACATAAAAG i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19655549 88 - 27850971 CA-TTTACTTAAAGATGAATTTCATTTATTTAAACAATAAAGTGGGAATACAATAGGAAGGAAGTGGTGACT--AAGAAGAGATATAAAAC i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79108338 77 - 85426708 TA-TTGACTTAAATATAAATTGCATTTCCATAAACAATA-----------CAATGGAAAAGAAGCAATAACT--AAGAGAAGGGATATAAA i canFam3.chr2 I 233 C 0 s dasNov3.JH570393 1731893 79 - 2296528 TA-TTGGCTTAAAGATAAATTACATTTCCTTAGACAATGGAATGACAA-----------GGAAGCAATGACTGAGAGAAGTGATCTAAAAA i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46482530 23 - 47448759 I e cerAty1.NW_012005170v1 58289 262 + 97742 I e manLeu1.NW_012101680v1 58318 260 + 85016 I a score=112923.000000 s hg38.chr3_KI270784v1_alt 170885 22 + 184404 TGTATCTAGCCTGGAGACTTGT s panTro5.chr3 63765 22 - 202621043 TGTATCTAGCCTGGAGACTTGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 58692 22 - 205426864 TGTATCTAGCCTGGAGACTTGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 77178 22 + 508821 TGTATCTAGCCTGGAGACTTGT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 214283 22 - 123690457 TGTATCTAGGCTTGAGAGTTGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 45103 22 - 85730 TGTATCCAGGCTTGAGAGTTGC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1454152 22 - 112612857 TGTAGCTGACCTTGAGAGTTGC i macFas5.chr15 C 0 C 0 s chlSab2.chr12 3709035 22 - 108555830 TGTATCCAGGCTTGAGAGTTGC i chlSab2.chr12 C 0 C 0 s colAng1.NW_012116822v1 1037429 22 - 1267912 TGTATCCAGCCTTGAGAGTTGC i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 26799 22 + 8899380 TGTATCTAGCCTTGAGAGTTGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4417386 22 + 4432243 TGTATCTAGCCTTGAGAATTGC i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19655637 22 - 27850971 TGTATCTAGCTTTGAGGTTTGC i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1731972 22 - 2296528 TATATCTAACCTTGAGTGCTAT i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79108415 0 - 85426708 C e calJac3.chr18 46482530 23 - 47448759 I e cerAty1.NW_012005170v1 58289 262 + 97742 I e manLeu1.NW_012101680v1 58318 260 + 85016 I e macNem1.NW_012020287v1 58723 26 + 4899514 I a score=807157.000000 s hg38.chr3_KI270784v1_alt 170907 127 + 184404 AACAAATATTATCAGCCAAAGGCGTCTGTTTAA-TGTGCTTTCATGCATGC-AAGTTTATTTGTCTGACTCAAGCTGTTTAAACTTATAATTCCATAATGGCCATTTT-AAATATTTTTGGAAACAAATA s panTro5.chr3 63787 127 - 202621043 AACAAATATTATCAGCCAAAGACGTCTGTTTAA-TGTGCTTTCATGCATGC-AAGTTTATTTGTCTGACTCAAGCTGTTTAAACTTATAATTCCATAATGGCCATTTT-AAATATTTTTGGAAACAAATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 58714 127 - 205426864 AACAAATATTATCAGCCAAAGACGTCTGTTTAA-TGTGCTTTCATGCATGC-AAGTTTATTTGTCTGACTCAAGCTGTTTAAACTTATAATTCCATAATGGCCATTTT-AAATATTTTTGGAAACAAATA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 77200 127 + 508821 AACAAATATTATCAGCCAAAGACGTCTGTTTAA-TGTGCTTTCATGCATGC-AAGTTTATTTGTCTGACTCAAGCTGTTTAAACTTATAATTCCATAATGGCCATTTT-AAATATTTTTGGAAACAAATA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 214305 123 - 123690457 AACAAATATTATCAGCCAAAGACGTCTGTCTAA-CGTGCTTTCATGCATGC-AAG----TTTGTTTGACTCAAGCTGTTTAAACCTATAATTCCATAATGGCCATTTT-AAATATTTTTGGAAACAAATA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 45125 123 - 85730 AACAAATATTATCAGCCAAAGATGTCTGTTTAA-TGTGCTTTCATGCATGT-AAGTTTG----TTTGACTCAAACTGTTTAAACTTATAATTCCATCATGGTCATTTT-AAATATTTTTGGAAACAAATA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1454174 127 - 112612857 AGCAAATATTACCAGCCAAAGAAGTCTGTTTAA-TGTGCTTTTATGCATGC-AGGTTTATCTGTTTGCCTCAAACTGTTTAAACTTATAATTCCATCATGGCCACTTT-AAATATTTTTGGAAACAAATA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 58749 124 + 4899514 AACGAATATTATCAGCCAAAGATGTCTGTTTAACTGTG-TTTCATGCATGTGAAGTTTGT---TTTACCTCAAACTGTTT-AACTTATATTTCCATCATGGTCATTTT-AAATATTTTTGGAAAACAATA i macNem1.NW_012020287v1 I 26 C 0 s chlSab2.chr12 3709057 126 - 108555830 AACAAATATTTCCAGCCAAAGAAGTCTGTTTAA-TGTG-CTTCATGCATGC-AGGTTTATCTGTTTGACTCAAACTGTTTAAACTTATAATTCCATCATGGCCACTTT-AAATAATTTTGGGAACAAATA i chlSab2.chr12 C 0 C 0 s colAng1.NW_012116822v1 1037451 127 - 1267912 AACAAATATTATCAGGCAAAGATGTCTGTTTAA-TGTGCTTTCATGCATGT-AAGTTTATTTGTTTGACTTAAGCTGTTTAAACTTGTAATTCCATCATGGCCATTTT-AAATATTTTTGGAAACAAATA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 26821 127 + 8899380 AACAAATATTCCCAGCCAAAGAAGTCTGTTTAA-TGTGCTTTCATGCATGC-AGATTTATCTGTTTAACTCAAACTGTTAAAAAGTATAATTCCATCATGGCCATTGT-AAATATTTTTGGAAACAAATA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4417408 121 + 4432243 AACAAATACTCCCAGCCAAAGAAGTCTGTTTAA-TGTGCTTTTATGCATGT-AAGTTTACCTGTTTGACTCAAACTGTT------TATAATTCCATCATGGCCATTTT-AAATATTTTTGGAAACAAATA i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19655659 126 - 27850971 AAGAAATATTCCCAGCTAAAGGAATCTGTATAT-TGTGCTTTTATGTGTGC-AGGTTTATCTGTTTATCTCAAACTGCTGGAACTTATAACTCTACCATGACC-TCTT-AGATATTTTTGACAACAAATA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79108415 123 - 85426708 --CAAATATT-TCAGCTAAACCAGTCTATTTAT---TGCTTCAGTATGTGC-AATCCTCTCTGCTTTCCTCAAATCCTTTGAACGTAGAATTCCAACATGACTACTTTGAGATATTTTTAGTAACAAATA i canFam3.chr2 C 0 I 508 s dasNov3.JH570393 1731994 122 - 2296528 AACAAATATT-CCAGCTAAATTTATCTATTTAT-TGTGCATT-----GTGC-AAGTTTATCTGCATAATTCTATCCCTTGGAATTTATAACTCCAACATAACCACTTGGAGATATTTTTCATAACAAATA i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46482530 23 - 47448759 I e cerAty1.NW_012005170v1 58289 262 + 97742 I e manLeu1.NW_012101680v1 58318 260 + 85016 I a score=35750.000000 s hg38.chr3_KI270784v1_alt 171034 4 + 184404 CATA s panTro5.chr3 63914 4 - 202621043 CATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 58841 4 - 205426864 CATA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 77327 4 + 508821 CATA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 214428 4 - 123690457 CATA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 45248 4 - 85730 CATA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1454301 4 - 112612857 CATA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 58873 4 + 4899514 CATA i macNem1.NW_012020287v1 C 0 I 331 s chlSab2.chr12 3709183 4 - 108555830 TATA i chlSab2.chr12 C 0 C 0 s colAng1.NW_012116822v1 1037578 4 - 1267912 CATA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 26948 4 + 8899380 CATA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4417529 4 + 4432243 CATA i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19655785 4 - 27850971 CATA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79109046 4 - 85426708 cATA i canFam3.chr2 I 508 I 4 s dasNov3.JH570393 1732116 4 - 2296528 TATA i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46482530 23 - 47448759 I e cerAty1.NW_012005170v1 58289 262 + 97742 I e manLeu1.NW_012101680v1 58318 260 + 85016 I a score=42729.000000 s hg38.chr3_KI270784v1_alt 171038 10 + 184404 TACTTTTGCA s panTro5.chr3 63918 10 - 202621043 TACTTTTGCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 58845 10 - 205426864 TACTTTTGCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 77331 10 + 508821 TACTTTTGCA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 214432 10 - 123690457 TACTTTTGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 45252 10 - 85730 TACTTTTGCA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1454305 10 - 112612857 CACTTCCACA i macFas5.chr15 C 0 C 0 s chlSab2.chr12 3709187 10 - 108555830 TACTTTCACA i chlSab2.chr12 C 0 C 0 s colAng1.NW_012116822v1 1037582 10 - 1267912 TACTTTTGCA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 26952 10 + 8899380 TACTTTTGCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4417533 10 + 4432243 TACTTTTGCA i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19655789 8 - 27850971 CACTTCCA-- i otoGar3.GL873538 C 0 I 324 s canFam3.chr2 79109054 6 - 85426708 TATGTT---- i canFam3.chr2 I 4 C 0 s dasNov3.JH570393 1732120 10 - 2296528 CGCTTCCACA i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46482530 23 - 47448759 I e cerAty1.NW_012005170v1 58289 262 + 97742 I e manLeu1.NW_012101680v1 58318 260 + 85016 I e macNem1.NW_012020287v1 58877 331 + 4899514 I a score=16323.000000 s hg38.chr3_KI270784v1_alt 171048 10 + 184404 -TA--TTT-AAAAA s panTro5.chr3 63928 10 - 202621043 -TA--TTT-AAAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 58855 10 - 205426864 -TA--TTT-AAAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 77341 10 + 508821 -TA--TTT-AAAAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 214442 9 - 123690457 -TA--TTT--TAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 45262 10 - 85730 -TA-TTTT--TAAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1454315 9 - 112612857 -TA--TTT--AGAA i macFas5.chr15 C 0 C 0 s chlSab2.chr12 3709197 9 - 108555830 -TA--TTT--AAAA i chlSab2.chr12 C 0 C 0 s colAng1.NW_012116822v1 1037592 11 - 1267912 -TA--TTTAAAAAA i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 26962 10 + 8899380 -TATTTTT---AAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4417543 8 + 4432243 -TA--TTT---AAA i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19656121 9 - 27850971 -TA--TTT--AAAA i otoGar3.GL873538 I 324 C 0 s canFam3.chr2 79109060 5 - 85426708 -TA--TTT------ i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1732130 10 - 2296528 Ttt--ttt--taaa i dasNov3.JH570393 C 0 I 358 e calJac3.chr18 46482530 23 - 47448759 I e cerAty1.NW_012005170v1 58289 262 + 97742 I e manLeu1.NW_012101680v1 58318 260 + 85016 I e macNem1.NW_012020287v1 58877 331 + 4899514 I a score=169194.000000 s hg38.chr3_KI270784v1_alt 171058 26 + 184404 A---------------AATCACCACTCTCCAATGTTTCTGT s panTro5.chr3 63938 26 - 202621043 A---------------AATCACCACTCTCCAATGTTTCTGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 58865 26 - 205426864 A---------------AATCACCACTCTCCAATGTTTCTGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 77351 23 + 508821 A---------------AAT---CACTCTCCAATGTTTCTGT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 214451 26 - 123690457 A---------------AATCACCACTCTCCAGTGTTTCTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 45272 26 - 85730 A---------------AATCACCACTCTCCAATGTTTCTGT i rheMac8.chrUn_NW_014858614v1 C 0 I 271 s macFas5.chr15 1454324 26 - 112612857 A---------------AATCACCACTCTCCAATGTTTCTGT i macFas5.chr15 C 0 C 0 s chlSab2.chr12 3709206 26 - 108555830 A---------------AATCATCACTCTCCAATGTTTCTGT i chlSab2.chr12 C 0 C 0 s colAng1.NW_012116822v1 1037603 26 - 1267912 A---------------AATCACCACTCTCCAGTGTTTCTGT i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 26972 26 + 8899380 A---------------AATTACCACTCCCCAATGTTTCTGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4417551 26 + 4432243 A---------------AATTACCACTCTCCAATGTTTCTGT i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19656130 41 - 27850971 AGCACGTATTTTTTGTAATCATTACTCTCAAATGTTGCTGT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79109065 25 - 85426708 ----------------AATCACCATTCTCAGGTATTTCTGT i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1732498 26 - 2296528 A---------------AATCACAATTCTCAAATGTTTCTGT i dasNov3.JH570393 I 358 C 0 e calJac3.chr18 46482530 23 - 47448759 I e cerAty1.NW_012005170v1 58289 262 + 97742 I e manLeu1.NW_012101680v1 58318 260 + 85016 I e macNem1.NW_012020287v1 58877 331 + 4899514 I a score=181945.000000 s hg38.chr3_KI270784v1_alt 171084 22 + 184404 TGAATC--ACA---CTTTTACATTATG s panTro5.chr3 63964 22 - 202621043 TGAATC--ACA---CTTTTACATTATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 58891 22 - 205426864 TGAATC--ACA---CTTTTACATTATG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 77374 22 + 508821 TGAATC--ACA---CTTTTACATTATG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 214477 22 - 123690457 TGAATC--ACA---CTTTTACATTATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 45569 22 - 85730 TGAATC--ACA---CTTTTATATTATG i rheMac8.chrUn_NW_014858614v1 I 271 C 0 s macFas5.chr15 1454350 24 - 112612857 TGAGTCAGAGA---CTTTTACGTGATG i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 59208 22 + 4899514 TGAATC--ACA---CTTTTATATTATG i macNem1.NW_012020287v1 I 331 C 0 s cerAty1.NW_012005170v1 58551 22 + 97742 TGAATC--ACA---CTTTTATATGATG i cerAty1.NW_012005170v1 I 262 C 0 s chlSab2.chr12 3709232 22 - 108555830 TGAATC--AGA---CTTTTACATGATG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 58578 22 + 85016 TGAATC--ACA---CTTTTATATTATG i manLeu1.NW_012101680v1 I 260 C 0 s colAng1.NW_012116822v1 1037629 22 - 1267912 TGAAGC--ACA---CTTTTACATTATG i colAng1.NW_012116822v1 C 0 C 0 s saiBol1.JH378197 26998 22 + 8899380 TGAATC--AGA---CTTTTACATTATG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4417577 22 + 4432243 TGACTT--GGA---CTTTTATATTATG i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19656171 23 - 27850971 TGAATA--AGATCTTCTTTATGTTA-- i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79109090 22 - 85426708 TGAGTC--AAA---CCTTTACATTATG i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1732524 22 - 2296528 TGAGTC--AAA---CTGGTACATTAAG i dasNov3.JH570393 C 0 C 0 e calJac3.chr18 46482530 23 - 47448759 I a score=1040469.000000 s hg38.chr3_KI270784v1_alt 171106 106 + 184404 TTGTTT-----------------------------------AATAAAATATGGTAAG--TTTTG--ACATGTATGA-TTTTATCATGTAAGTAGCATAACTTCTCAGCCAAATA-TTTATCATTTGACTCTATAGTGGAAAGCTGAG s panTro5.chr3 63986 106 - 202621043 TTGTTT-----------------------------------AATAAAATATGGTAAG--TTTTG--ACATGTATGA-TTTTATCATGTAAGTAGCATAACTTCTCAGCCAAATA-TTTATCATTTGACTCTATAGTGGAAAGCTGAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 58913 106 - 205426864 TTGTTT-----------------------------------AATAAAATATGGTAAG--TTTTG--ACATGTATGA-TTTTATCATGTAAGTAGCATAACTTCTCAGCCAAATA-TTTATCATTTGACTCTATAGTGGAAAGCTGAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 77396 106 + 508821 TTGTTT-----------------------------------AATAAAATATGGTAAG--TTTTG--ACATGTATGA-TTTTATCATGTAAGTAGCATAACTTCTCAGCCAAATA-TTTGTCATTTGACTCTATAGTAGAAAGCTGAG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 214499 106 - 123690457 TTGTTG-----------------------------------AATAAAATACGGTAAG--TTTTG--ACATGTATGA-TTTTATCATATAAGTAGCATAACTCCTCAGCCAAATA-TTTATCATTTGACTCTATAGTAGAAAGCTGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 45591 106 - 85730 TTGTTT-----------------------------------AATAAAATATGGTAAG--TTTTG--ATGTGTATAA-TTTTATCATATAAGTAGCATAACTCCTTAGCCAAAAA-TTTATCATTTGACTCTATAGTAGAAAGCTGAG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1454374 141 - 112612857 TTGTTTaataaaatatggtagataaaaataaaatagaataaaataaaataTGGTAGG--TTTTG--ACATGTATGA-TTTTATCATATAAGTAGCATAACTTCTCAGCCAAAAA-TTTAGCATTTGGCTCTAGAGTAGAAAGCTGAG i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 59230 106 + 4899514 TTGTTT-----------------------------------AATAAAATATGGTAAG--TTTTG--ATGTGTATAA-TTTTATCATATAAGTAGCATAACTCCTTAGCCAAAAA-TTTATCATTTGACTCTATAGTAGAAAGCTGAG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 58573 106 + 97742 TTGTTT-----------------------------------AATAAAATATGGTAAG--TTTTG--ATGTGTATAA-TTTTATCATAAAAGTAGCATAACTCCTTAGCCAAAAA-TTTATCATTCGATTCTATAGTAGAAAGCTGAG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3709254 104 - 108555830 TTGTTT-----------------------------------CATAAAATATGGTAGG--TTTTG--ACATGTATGA-TTTTATCATATAAGTACCATAACTCCTCAGCCAAAAG-TTTAGCATTTGACTC--TAGTAGAAGGCTGAG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 58600 106 + 85016 TTGTTT-----------------------------------AATAAAATATGGTAAG--TTTTG--ATGTGTATAA-TTTTATCATAAAAGTAGCATAACTCCTTAGCCAAAAA-TTTATCATTCGATTCTATAGTAGAAAGCTGAG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1037651 106 - 1267912 TTGTTT-----------------------------------AATAAAATATGGTAAG--TTTTG--ACATGTATGA-TTTTATCATATAAGTAGCATAACTCCTCAGCCAAAAA-TTTATCATTTGACTCTATCGTAGAAAGCTGAG i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46482553 108 - 47448759 TTATTT-----------------------------------AACAAAATATGGTAAA--TTTGGACACATATATGA-CTTGATCATATAAGTAGCATAACTCCTCAGCCAAAAA-TTTAGCATTTGATTTTATAGTAGAGAGCTGAA i calJac3.chr18 I 23 C 0 s saiBol1.JH378197 27020 106 + 8899380 TTGTTT-----------------------------------AATAAAATATGGTAAA--GTTTG--ACCTGGATGA-TTTTATCATATAAGTAGCATAATTCCCCAGCCAAAAA-TTTAGCATTTGAGTCTATAGTACAAAGCTGAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4417599 105 + 4432243 TTGTTT-----------------------------------AATAAAATATGGTAAT--TCTTG--ACATGTATGA-TTTTATCATATAAGTAATATAATTCCTCAGCCAAAAA-TTTAGCATTT-AGTCTATAGTAGAAATCTCAG i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19656194 107 - 27850971 TTATTT-----------------------------------AATGAAGGAAGGTAGA--TTTTG--GCATGCATGA-TTTTACTCCATAAGTAGCATAAATTCTTAGGCAAAAATTTTAAGTTTTGACTCCAAAATAGAAAGCTGCA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79109112 103 - 85426708 ---TTT-----------------------------------AATAAAGTATGGTATA--TTTTG--GCATATATGATTTTTATCATGTAGGTAGCATAGATTTACAG-CAAACC-TTCAGTATTTGACTCTAATGGAGACAACTGAC i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1732546 104 - 2296528 TTGTTT-----------------------------------AGTAAAGTCTGGTAGAGTTTTTG--ACACGTATGATTTTTATCATATAGGTACCATAAACCTCTAGCATAAAA-TATAGTACTTAA-----AAATAGAAAGTTGAA i dasNov3.JH570393 C 0 I 436 a score=436066.000000 s hg38.chr3_KI270784v1_alt 171212 48 + 184404 TTCTGTACATTGTGTTCTAAAGAT-AGACAAAAATCTAGAGATTTTCT----------T s panTro5.chr3 64092 48 - 202621043 TTCTATACATTGTGTTCTAAAGAT-AGACAAAAATCTAGAGATTTTCT----------T i panTro5.chr3 C 0 C 0 s panPan2.chr3 59019 48 - 205426864 TTCTGTACATTGTGTTCTAAAGAT-AGACAAAAATCTAGAGATTTTCT----------T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 77502 48 + 508821 TTCTGTACATTGTGTTCTAAAGAT-AGACAAAAATCTAGAGATTTTCT----------T i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 214605 48 - 123690457 TTGTGTACATTGTGTTCTAAAGAT-AGACAAAAATCTAGAGATTTTCT----------T i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 45697 59 - 85730 TTCTGTACATTGTATTCTAAAGATAAGACAAAAATCTAGAGATTTTCTTCTTTCAAAGT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1454515 58 - 112612857 TTCTGTATATTGTGTTCTAAAGAT-AGACAAAAATCTAGAGATTTTCTTCTTTCAAAGT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 59336 58 + 4899514 TTCTGTACATTGTATTCTAAAGAT-AGACAAAAATCTAGAGATTTTCTTCTTTCAAAGT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 58679 59 + 97742 TTCTGTACATTGTATTCTAAAGATAAGACAAAAATCTAGAGATTTTCTTCTTTCAAAGT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3709358 55 - 108555830 TTCTGTACATTGTGTTCTAAAGAT-AGACAAAAATCTAGAGATT---TTCTTTCAAAGT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 58706 59 + 85016 TTCTGTACATTGTATTCTAAAGATAAGACAAAAATCTAGAGATTTTCTTCTTTCAAAGT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1037757 58 - 1267912 TTCTGTACATTGTATTCTAAAGAT-AGACAAAAATCCAGAGATTTTCTTCTTTCAAAGT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46482661 47 - 47448759 TTCTGTATGTTGCTTTCTAAAGGT-AG----------AGAT-TTTACTTCTTTCAAAAT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 27126 58 + 8899380 TTCTGTACATTGTGTTCTAAAGAT-AGACAAAAATATAGATACTTTCTTCTTTCAAGGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4417704 58 + 4432243 TTCTGTACATTGTATTCTAAAGAT-AGACAAAAATCTAGAGATTTTCTTCTTATAAAGT i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19656301 48 - 27850971 GTCAATATATTGAGTTTTAAAGAT-AGACAAAAATCTAGGGATATTCTT---------- i otoGar3.GL873538 C 0 I 342 s canFam3.chr2 79109215 39 - 85426708 TTTAGAGG---------TAAAAAT-AAACAAAAATCTAGAGATATCCTC---------- i canFam3.chr2 C 0 I 10 s dasNov3.JH570393 1733086 51 - 2296528 ttctcTGCATTGAGTTTT-AAGCT-AGACAAAAATCTAGATTTATTCTCCTTT------ i dasNov3.JH570393 I 436 C 0 a score=4499339.000000 s hg38.chr3_KI270784v1_alt 171260 440 + 184404 AAAAGCAGATGAG-GCCTCCTGCCATCCT-C---TGAGG-------CATTAAATTGCTTTGCCAAAGTCACGCTTTTAATTTATTTGACTAATTTGAT--ATA-TTTATCTGGTAATTTATGTAAT-------------GCAGCAATATGTAATTGTATCTTCCCTTTTGGTGCC--ATGAAGTGCTAGGT----AATGCCACCTTAGGAGCTTTGGGTGAATTATTTAATATTTATTGG-TTTTACTTCTATTATCAAGTAGATAATGGGGCTAGAGTAGACAA----CTATTCTGTATATCTTCCAGCTATAAACTTTTGTGGTGATTGAA-TGT-AAACTTGGGGAACAT--CTCATTTTCTAGGATTCTGCAC-----TAGCAACTCAGCAGTGTCACTCTGCTCCTTGAGTTGTGGTAAACTTTGGTTCCTCTATTTCAGTGAGCACCTTCACTTTTTTGATATCCC-AGGATCCAAGTG-AAAA s panTro5.chr3 64140 440 - 202621043 AAAAGCAGATGAG-GCCTCCTGCCATCCT-C---TGAGG-------CATTAAATTGCTTTGCCAAAGTCACACTTTTAATTTATTTGACTAATTTGAT--ATA-TTTATCTGGTAATTTATGTAAT-------------GCAGCAATATGTAATTGTATCTTCCCTTTTGGTGCC--ATGAAGTGCTAGGT----AATGCCACCTTAGGAGCTTTGGGTGAATTATTTAATATTTCTTGG-TTTTACTTCTATTATCAAGTAGATAATGGGGCTAGAGTAGACAA----CTATTCTGTATATCTTCCAGCTATAAACTTTTGTGGTGATTGAA-TGT-AAACTTGGGGAACAT--CTCATTTTCTAGGATTCTGCAC-----TAGCAACTCAGCAGTGTCACTCTGCTCCTTGAGTTGTGCTAAACTTTGGTTCCTCTATTTCAGTGAGCACCTTCACTTTTTTGATATCCC-AGGATCCAAGTG-AAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 59067 440 - 205426864 AAAAGCAGATGAG-GCCTCCTGCCATCCT-C---TGAGG-------CATTAAATTGCTTTGCCAAAGTCACACTTTTAATTTATTTGACTAATTTGAT--ATA-TTTATCTGGTAATTTATGTAAT-------------GCAGCAATATGTAATTGTATCTTCCCTTTTGGTGCC--ATGAAGTGCTAGGT----AATGCCACCTTAGGAGCTTTGGGTGAATTATTTAATATTTCTTGG-TTTTACTTCTATTATCAAGTAGATAATGGGGCTAGAGTAGACAA----CTATTCTGTATATCTTCCAGCTATAAACTTTTGTGGTGATTGAA-TGT-AAACTTGGGGAACAT--CTCATTTTCTAGGATTCTGCAC-----TAGCAACTCAGCAGTGTCACTCTGCTCCTTGAGTTGTGCTAAACTTTGGTTCCTCTATTTCAGTGAGCACCTTCACTTTTTTGATATCCC-AGGATCCAAGTG-AAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 77550 440 + 508821 AAAAGCAGATGAG-GCCTCCTGCCATCCT-C---TGAGG-------CATTAAATTGCTTTGCCAAAGTCACACTTTTAATTTGTCTGACTAATTTGAT--ATA-TTTATCTGGTAATTTATGCAAT-------------GCAGCAATAAGTAATTGTATCTTCCCTTTTGGTGCC--ATGAAGTGCTAGGT----AATGCCACCTTAGGAGCTTTGGGTGAATTATTTAATATTTCTTGG-TTTTACTTCTGTTATCAAGTAGATAATGGGGCTAGAGTAGACAA----CTATTCTGTATATCTTCCAGCTATAAACTTTTGTGGTGATTGAA-TGT-AAACTTGGGGAACAT--CTCATTTTCTAGGATTCTGCAC-----TAGCAACTCAGCAGTGTCACTCTGCTCCTTGAGTTGTGGTAAACTTTGGTTCCTCTATTTCAGTGAGCAACTTCACTTTTTTGATATCCC-AGGATCCAAGTG-AAAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 214653 439 - 123690457 AAAAGCAGATGAG-GCCTCCCGCCATCCT-C---TGAGG-------CATTAAATTGCTTTGCCAAAATCACACTTTTAATTTATTTGACTAATTTGAT--ATA-TTTATCTGGTAATTTATGTAAT-------------TCAGCAATATGTAATT-TATCTTCCCTTTTGGTGCC--ATGAAGTGCTAGGT----AATGCCACCCTAGGAGCTTTGGAAGAATTATTTAATATTTCTTGGTTTTTACTTCTATTATCAAGTAGATAAT-AGGCTAGAGTAGACAA----CTATTCTGTGTATCTTCCAGCTATAAACCTTTGTGGTAATTGAA-TGT-AAACTTGGGGAACAT--CTCATTTTCTAGGATTCTGCAC-----TAGCAACTCAGCAGTTTCACTCTGCTCCTTGAGTTGTGGTAAACTTTGGTTCCTCTATTTCAGTGAGAACCTTCACTTTTTTGATATCCC-AGGATCCAAGTG-AAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 45756 436 - 85730 GAAAGCAGATGAG-GCCTCCCGCTATCCT-C---TGAGG-------CATTAAATTGCTTTGCCAAAGTCACACTTTTAATTTATCT----AATTTGAT--ATA-TTTATCTGGTAATTTATGTAAT-------------TCAGTAATATTTAATTGTATCTTCCCTTTTGGTGCC--ATAAAATGCTAGGT----AATGCCACCGTAGGAGCTTTGGGTGAATTATTTAATATTTCTTGG-TTTTACTTCCATTATCAAGTAGATAATGGGGCTAGAGTATACAA----CTATACTGTAAATCTTCCAGCTATAAACTTTTGTGGTAACTGAA-TGT-AAACTTGGGGAACAT--CTCATTTTCCAGGATTCTGCAG-----TAGCAACTCAGCAGTTTCACTCTGCTCCTTGTGCTGTGGTAAACTTTGGTTCCTCTGTTTCAGTGAGCACCGTCACTTTTTTTATATCCC-AGGATCCAAATG-AAAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1454573 438 - 112612857 AAAAGCAGATGAG-GCCTCCCACCACCCT-C---TGAGC-------CATTAAATTGATTTGCCAAAGTCACACTTTTAATTTATTTGATGAATTTGAT--GTA-TTTATATGATAATTTATGTAAT-------------TCAGCAATATGTAATTGTATCTTCCCTTTTGGTGCC--ATGAAATGCTAGGT----AATGCCACCTTAGGAGCTTTGGGTGAGTTACTTACTATTTCTAGG--TTTACTTCCCTTATCAAGTAGGTAATGGGGCTAGAGTGGACAA----CTATACTGTATATCTTCCAGCTATAAACTTTTGTGGTAATTGAA-TGT-AAATTTGAGGAACAT--CTCATTTTCCAGGATTCTGCAC-----TAGCAACTCAGCAGTTTCACTCGGCTCCTTGTGTTGTGACAAACTTTGGTTCCTC-ATTTCAGTGAGCACCTTCACTTTTTTGGTATCCC-AGGATCCAAATG-AAAA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 59394 436 + 4899514 GAAAGCAGATGAG-GCCTCCTGCTATCCT-C---TGAGG-------CATTAAATTGCTTTGCCAAAGTCACACTTTTAATTTATCT----AATTTGAT--ATA-TTTATCTGGTAATTTATGTAAT-------------TCAGTAATATTTAATTGTATCTTCCCTTTTGGTGCC--ATAAAATGCTAGGT----AATGCCACCGTAGGAGCTTTGGGTGAATTATTTAATATTTCTTGG-TTTTACTTCCATTATCAAGTAGATAATGGGGCTAGAGTATACAA----CTATACTGTAAATCTTCCAGCTATAAACTTTTGTGGTAACTGAA-TGT-AAACTTGGGGAACAT--CTCATTTTCCAGGATTCTGCAG-----TAGCAACTCAGTAGTTTCACTCTGCTCCTTGTGTTGTGGTAAACTTTGGTTCCTCTGTTTCAGTGAGCACCGTCACTTTTTTTATATCCC-AGGATCCAAATG-AAAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 58738 440 + 97742 GAAAGCAGATGAG-GCCTCCCGTTATCCT-C---TGAGG-------CATTAAATTGCTTTGCCAAAGTCACACTTTTAATTTATCTGACTAATTTGAT--ATA-TTTATCTGGTAATTTATGTAAT-------------TCAGTAATATTTAATTGTATCTTCCCTTTTGGTGCC--ATGAAATGCTAGGT----AATGCCACCGTAGGAGCTTTGGGTGAATTATTTAATATTTCTTGG-TTTTACTTCCATTATCAAGTAGATAATGGGGCTAGAGTATACAA----CTATACTGTAAATCTTCCAGCTATAAACTTTTGTGGTAACTGAA-TGT-AAACTTGGGGAACAT--CTCATTTTCCAGGATTCTGCAG-----TAGCAACTCAGTAGTTTCACTCTGCTCCTTGTGTTGTGGTAAACTTTGGTTCCTCTGTTTCAGTGAGCACCTTCACTTTTTTTATATCCA-AGGATCCAAATG-AAAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3709413 440 - 108555830 AAAAGCAGATGAG-GCCTCCTGCCACCCT-C---TGAGC-------CATTAAATTGCTTTGCCAAAGTCACACTTTTAATTTATCTGACTAATTTGAT--ATA-TTTATCTGGTAATTTATGTAAT-------------TCAGTAACATGTAATTGTATCTTCCCTTTTGGTGCC--ATGAAATGCTAGGT----AATGCCACCTTAGGAGCTTTGGGTGAGTTACTAACTATTTGTTGG-TTTTACTTCCCTTATCAAGTAGGTAATAGGGCTAGAATGGACAA----CTATACTGTATATCTTCCAGCTATAAACTTTTGTGGTAAGTGAA-TGG-AAATTTGAGGAACAT--CTCATTTTCCAGGATTCTGCAC-----TAGCAACTCAGCAGTTTCACTCGGCTCCTTGTGTTGTGGCAAACTTTGGTTCCTCTATTTTAGTGAGCACCTTCACTTTTTTGGTATCCC-AGGATGCAAATG-AAAA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 58765 439 + 85016 AAAAGCACATGAG-GATTTTTG-CACCCT-C---TGAGG-------CATTAAATTGCTTTGCCAAAGTCACACTTTTAATTTATCTGACTAATTTGAT--ATA-TTTATCCGGTAATTTATGTAAT-------------TCAGTAATATTTAATTGTATCTTCCCTTTTGGTGCC--ATGAAATGCTAGGT----AATGCCACCGTAGGAGCTTTGGGTGAATTATTCAATATTTCTTGG-TTTTACTTCCATTATCAAGTAGATAATGGGGCTAGAGTATACAA----CTATACTGTAAATCTTCCAGCTATAAACTTTTGTGGTAACTGAA-TGT-AAACTTGGGGAACAT--CTCATTTTCCAAGATTCTGCAG-----CAGCAACTCAGTAGTTTCACTCTGCTCCTTGTGTTGTGGTAAACTTTGGTTCCTCTGTTTCAGTGAGCACCTTCACTTTTTTTATATCCA-AGGATCCAAATG-AAAA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1037815 437 - 1267912 AAAAGCAGATGAG-GCCTCCTGCTATCCT-C---TGAGG-------CATTAAATTGCTTTGCCAAAGTCACACTTTTAATTTATCT----AATTTGAT--ATATTTTATCTGGTAATTTATGTAAT-------------TCAGCAATATTTAATTGTATCTTCCCTTTTGGTGAC--ATGAAATGCTAGGT----AATGCCACCGTAGGAGCTTTGGGTGAATTATTTAATATTTCTTGG-TTTTACTTCCATTATCAAGTAGATAATGGGGCTAGAGTATACAA----CTATACTGTAAATCTTCCAGCTATAAACTTTTGTGGTAACTGAA-TGT-AAACTTGGGGAACAT--CTCATTTTCCAGGATTCTGCAG-----TAGCAACTCAGTAGTTTCACTCTGCTCCTTGTGTTGTGGTAAACTTTGGTTCCTCTGTTTCAGTGAGCACCTTCACTTTTTTTATATCCC-AGGATCCAAATG-AAAA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46482708 429 - 47448759 AAAAGCAATTGAA-CCCTCCCACCACACT-C---TGAGG-------CATCAAATCGCTTTGCCAAAGTCACACTTTTAATTTATCTGACTAACGTGAT--ATA-TTTATCTGGCAATTTACATAAT-------------TTA---------AATTGTATCTTTTCTTTTGGTCCC--ATGAAATGCTAGGT----AATGCCACCTTAGGAGCCTTGGGTGAATTATTTAGTATTTCTTGG-TTTTACTTCCATTATGAAGTAGATAATGGGGCTAGAGTAGACAA----CTGTACTGTATATCTCTCAACTGTAAACTTCTGTGGTAATTTAA-TGTGAAATTTGGGCAACAT--CTCATTTTCCAGGATTCTGCAC-----TAGCAACTCGGCAGTTTAACTCTGCTCCTTGTGT---GGCAAACTCTGGTTCCTCTACTTCAGCGAGCACCTTTACTTTTTTGATACCCC-ATAATCCAAATG-AAAA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 27184 439 + 8899380 AAAAGCAAATGAG-ACCTCCCACCATCCT-C---CAAGG-------CATTAAATTGCTTTGCCAAAGTCACACTTTTAATTTATCTGATCAATTTGAT--ATA-TTTTTCTGGAAATTTATGTAAT-------------CCAGCAATATGCAATTGTATCTTCCCTTTTGGTGCC--ATGAAATGCTAGGT----AATGCTACCTTAGGAGCTTT-GGTGAATTATTTAATATTTCTTGG-TTTCACTTCCATTATGAAGTAGATAATCAGGCTAGAGTAGACAG----CTGTACTATATATCTTCCAGCTATAAACTTTTGTGGTAATTGAA-TGT-AAATTTGGGGAACAT--CTCATCTTCCAGGATTCAGCAC-----TAGCAACTCAGCAATTTCACTCTTCTCATTGTGTTGGGGCAAACTTTGGTTCCTCTATTTCAGTGAGCACCTTCACTTTTTTGATATTCT-AGGATCCAAATA-AAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4417762 444 + 4432243 AAAAGCAAATGAG-TCCTCCCCTCAACCT-C---TGAGG-------CATTAAATTGCTTTGCCAAAGTCACACTTTTAATTTATCTGACTAATTTGAT--GTA-TTTATCTGGTAATTTATGTAAT-------------TCAGCAATATACAATTGTATCTTCTCTTTTGGTGCC--ACGAAATGCTAGGTAATGAATGCCACCTTAGAAGCTTTGAGTTAATTATTTAATATTGCTTGG-TTTTACTTCCATTATTAAATAGACAATGGTGCTAGATTATACAA----CTGTACTGTATATTCTCCAGCTGTAAGCTTTTGTGGTAATTGAA-TGT-AAATTTGGGAGACAT--CTCATTTTCCAGGATTCTGCAC-----TAGCAACTCAGCAGTTTCACTGTGTTCATTGTGTTGTGGCAAACTTTGGTTCCTCTATTTCAGTGAGTACCTTCACTTTTTTGATATCCC-AGGAACCAAATA-AAAA i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19656691 426 - 27850971 aaaaGCAGGTGAG-GTTTCCCATTGCATTGC---TGAGG-------CATACAATGTATTTGCCAGAGTCACACTTTTAATTTATCTGATTAATTTGAT--GAA-CTTATCTGGTAATTTATCTGGC-------------TCAGCATTATGGAATTGTATCATCTC-TTTGGTACT--AT-AAATGTTAGCT----AATAC-ACTTCAGGAGCTATGGAAGAATCATTTAATCTTTTTTGA-TTTTACTCCTATTATC-AGTATACAGCAGGGCTAAAGTAGATAATTACTTATGCTGAATATCCTCCAGCTATATAATTGTATGCTTACTGAA-TGT-GAAATTTGGGAGCAT--CTCATTTTCCAGAATTCTATACCAGCATAGCAACTCAGCAGTTTCGCTTTGCTTCTTGTGTTACAGC------------------TTCAGTGAGCACCTT--CTATTTTGATATCCC-AAGATCCAAATG-AAAG i otoGar3.GL873538 I 342 C 0 s canFam3.chr2 79109264 422 - 85426708 AAAATTAGCTAAGTGCCTC-----ATCCT-CAAATAAGG-------TATTTAATAACTGTGCCAAAGTCACACTTTTAGTGTAGCTAATTAATTTAAT--GAA-TTTGTTTGGTAATTTATTTCAT-------------TCAGCATTAAGGAATTGTTTCATCTCTTTTG------------ATGCTAGGT----AAtgccactttaggaactttggacaaatcatgtaaccttttttgg-ttttactcccattatc-agtaggaaatggaattaaagttgataa----ttacttttaataccctctagctataaaattttatggttATCAAA-TATGAAATTTGGGGAGCATTACTCATTTCCCAAAATTCTACAC-----TAATATC-----AGTTTTGCTCTGCT--TTGTTTTATGGTGAACTTTGCTTCACATATTTTAATGAACAGTGAC----TTTTGATAGCCCTAGGATCCAAATGAAAAA i canFam3.chr2 I 10 C 0 s dasNov3.JH570393 1733137 464 - 2296528 AAAAGAAAAAGAA-A--TTGAGCTGCCCT-T---TAGGGGCCATTACTTTAAAGTACTTTGCCAAAGTCACACTTTTAAGTATTCTGATTAATTTAATGAGAA-TTTTTCTGGTAATTTATCTGATGAAATTATATTACTCAGTATTATAGAATTGTACTGTATGTTTTGGTGACTTATAAAATGCTAGGT----AATGATGCTTTAGGAGCTTTGGGTGAATTATTTAATCTTTCTGGG-TTTTAGTCCTATTAGCAA-TAGATAACAAGGCTAAAGTAGATAA----TTAC-TTATATACCCTACAGCTATAAAGCTTACTAGTTACTGAGTTGG-AAACTTGGGAGCCTT-GCTTATTTCCCAGAACCTTGCTCT----TAATAGTTCAGCAGCTTCATTCTGCTTCTTGTGCTGCAGGAAATTTTGCTTCACATGTTTCAGTGAGCAGCTTCACTTTTTTGATATCCCCAGGTTCcaaata-aaaa i dasNov3.JH570393 C 0 I 369 a score=1679290.000000 s hg38.chr3_KI270784v1_alt 171700 160 + 184404 AATAAGGATAAAAGACAGTGGGGAAAATAACAGCTTAGTGCAGAACAGGGAAAGCTTCTTTTCTGTTTCTGAAGCCCCACAAGGTCACCTCCTCTCAATCTGGCTATTTCATGGAGAATCCAGGTGACAAAGACAGAA---GACACA-TTTTATGTCTGTGTCT---------- s panTro5.chr3 64580 160 - 202621043 AATAAGGATAAAAGGCAGTGGGGAAAATAACAGCTTAGTGCAGAACAGGGAAAGCTTCTTTTCTGTTTCTGAAGCCCCACAAGGTCACCTCCTCTCAATCTGGCTATTTCATGGAGAATCCAGGTGACAAAGACAGAA---GACACA-TTTTATGTCTGTGTCT---------- i panTro5.chr3 C 0 C 0 s panPan2.chr3 59507 160 - 205426864 AATAAGGATAAAAGGCAGTGGGGAAAATAACAGCTTAGTGCAGAACAGGGAAAGCTTCTTTTCTGTTTCTGAAGCCCCACAAGGTCACCTCCTCTCAATCTGGCTATTTCATGGAGAATCCAGGTGACAAAGACAGAA---GACACA-TTTTATGTCTGTGTCT---------- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 77990 160 + 508821 AATAAGGATAAAAGGCAGTGGGGAAAATAACAGCTTAGTGCAGAACAGGGAAAGCTTCTTTTCTGTTTCTGAAGCCCCACAAGGTCACCTCCTCTCAATCTGGCTATTTCATGGAGAATCCAGGTGACAAAGACAGAA---GACACA-TTTTATGTCTGTGTCT---------- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 215092 160 - 123690457 AATAAGGATAAAAGGCAGTGGGGAAAATAATAGCTTAGTGCAGAAAAGGGAAAGCTTCTTTTCTGTTTCTGAAGCCCCACAAGGTCACATCCTCTCAATCTGGCTATTTCATGGAGAATCCAGGTGACAAAGACAGAA---GACACA-TTTTATGTCTGTGTCT---------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 46192 160 - 85730 AATAAGGATAAAAGGCAGTGGGGAAAATAATAGCTTAGTGCAGAAAAGGGAAAGCTTCTTTTCTGTTTCTGAAGCCCCACAAGGTCACATCCTCTCGATCTGGCTATTTCATGGAGAATCCAGGTGACAAAGACAGAA---GACACA-TTTTATGCCTGTGTCT---------- i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1455011 159 - 112612857 AATAAGGAGAACAAGCAGTGGGGAAAAGAATAGCTTAGTGCAGAAAAGGGAAAGCTTCTTTTCTGTTTCTGAGGCCCCAC-ATGTCACATCCTCTCAATCTGGCTATTTCATGGAGAATCCAGGTGACAAAGACAGAA---GACACA-TTTTATGCCTGTGTCT---------- i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 59830 160 + 4899514 AATAAGGATAAAAGGCAGTGGGGAAAATAATAGCTTAGTGCAGAAAAGGGAAAGCTTCTTTTCTGTTTCTGAAGCCCCACAAGGTCACATCCTCTCGATCTGGCTATTTCATGGAGAATCCAGGTGACAAAGACAGAA---GACACA-TTTTATGCCTGTGTCT---------- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 59178 158 + 97742 AATAAGGATAAAAGGCAGTGGGGAAAATAATAGCTTAGTGCAGAAAAGGGAAA-CTTCTTTACTGTTCCTGAAGCCCCACAAGGTCACATCCTC-CGATCTGGCTATTTCATGGAGAATCCAGGTGACAAAGACAGAA---GATACA-TTTTATGCCTGTGTCT---------- i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3709853 160 - 108555830 AATAAGGAGAACAAGCAGTGGGGAAAAGAATAGCTTAGTGCTGAAAAGGGAAAGGTTCTTTTCTGTTTCTGAAGCCCCACAAGGTCACATCCTCTTGATCTGGCTATTTCATGGAGAATCCAGGTGACAAAGACAGAA---GACACA-TTTTATGCCTGTGTCT---------- i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 59204 159 + 85016 AATAAGGATAAAAGGCAGTGGGGAAAATAATAGCTTAGTGCAGAAAAGGGAAA-CTTCTTTACTGTTCCTGAAGCCCCACAAGGTCACATCCTCTCGATCTGGCTATTTCATGGAGAATCCAGGTGACAAAGACAGAA---GACACA-TTTTATGCCTGTGTCT---------- i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1038252 160 - 1267912 AATAAGGATAAAAGGCAGTGGGGAAAATAATAGCTTAGTGCAGAAAAGGGAAAGCTTCTTTTCTGTTTCTGAAGCCCCACAAGGTCACATCCTCTCAATCTGGCTATTTCATGGAGAATCCAGGTGACAAAGACAGAA---GACACA-TTTTATGCCTGTGTCT---------- i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46483137 159 - 47448759 AACAAAAGTAAAAGGCAGTGGGGAAAAGAATAACTTAGTGCAGAAAAGGAAAAGCTTCTTTTCTGTTCCTGAAGCCCCACAAGGTCACATTCTCTCAATCTGGCTATTTCATGTAAAATCCAGGTGACAAAGACAGAA---GGCACA-TTTTGTGT-TGTGTCT---------- i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 27623 160 + 8899380 AATAAGGATAAAAGGCAGTGGGAAATAAAATAGCTTAGTGCAGAAAAGGGAAAGCTTCTTTTCTGTTTCTGAAGCCCCACAAGTTCACATCTTCTTGATCTGGCTATTTCATGTAGCATCCTGGTGATAAAGACAGAA---GACACA-TTTTGTGTCTGTGTCT---------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4418206 156 + 4432243 AATAATGATAAAAAGCAGTGGGAAAAAGAATAGCTTAGTGCAGAAAAGGGAAAGCTTCTTTTCTGCTTCTGAAGACCCACAACATCACATCCTCTCAAC----CTATTTCATGTAGAATCCAGATGACAAAGACAGAA---GACACA-TTTTATATCTGTGTCT---------- i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19657117 141 - 27850971 ACGAATGATAGAAAGCAGTAGGGAAAAGAATACCTTAGTGCAGAAA---------------------CACCAAGTCTGACAATGTCACATCCTCTAAATCTGGCTG-TTAATGTAAAGTCCAGGAGGTAAAGACAGAAGATGACACA-TTTTGTGTCTTTTTCT---------- i otoGar3.GL873538 C 0 I 14114 s canFam3.chr2 79109686 161 - 85426708 AAGAATTATAAGAAGCAGTTGGGGAAAGAACAGCTCAATGCA-AAAATGGAAACCTTTCTATTTGTTCCTGGAGCACCACAATGTCACATCCTTTAAATCTGTCTGTTTA--GGCAAACCCAGGTGGTAAAGACAGAAGAGGACAAATTTTTGTGTCTTTGTCT---------- i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1733970 172 - 2296528 aaaaattataaaaggcaaTAAGAGAAAGGAAAGCTTAGTGTAGAGAGGGGAATGTTCTCTTTCTCTTGCTGAAG-CCTACAATATTATATTCTCTAGATCTTGCTGTTTAATGCAAAGGCCAGGGAATAAAGGCAGAAAAGGACACA-TTTTGTACTGTTGTCTTTTAATGTCT i dasNov3.JH570393 I 369 C 0 a score=142153.000000 s hg38.chr3_KI270784v1_alt 171860 13 + 184404 TTTTGTTTCTCTG s panTro5.chr3 64740 13 - 202621043 TTTTGTTTCTCTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 59667 13 - 205426864 TTTTGTTTCTCTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 78150 13 + 508821 TTTTGTTTCTCTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 215252 13 - 123690457 TTTTGTTTCTCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 46352 13 - 85730 TTTTGTTTCTCTG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1455170 13 - 112612857 TTTTGTTTCTCTG i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 59990 13 + 4899514 TTTCGTTTCTCTG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 59336 13 + 97742 TTTTGTTTCTCTG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3710013 13 - 108555830 TTTTGTTTCTCTG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 59363 13 + 85016 TTTTGTTTCTCTG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1038412 13 - 1267912 TTTTGTTTCTATG i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46483296 13 - 47448759 TTTTGTTTCTTTG i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 27783 13 + 8899380 TTTTGTTTCTCTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4418362 13 + 4432243 GTTTGTTTCTCTG i cebCap1.NW_016107581v1 C 0 C 0 s canFam3.chr2 79109847 13 - 85426708 TTTTATTTCTTTG i canFam3.chr2 C 0 I 21228 s dasNov3.JH570393 1734142 13 - 2296528 TTTAATTTTCCTG i dasNov3.JH570393 C 0 C 0 e otoGar3.GL873538 19657258 14114 - 27850971 I a score=10424.000000 s hg38.chr3_KI270784v1_alt 171873 1 + 184404 T s panTro5.chr3 64753 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 59680 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 78163 1 + 508821 T i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 215265 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 46365 1 - 85730 T i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1455183 1 - 112612857 T i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 60003 1 + 4899514 T i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 59349 1 + 97742 T i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3710026 1 - 108555830 T i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 59376 1 + 85016 T i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1038425 1 - 1267912 T i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46483309 1 - 47448759 T i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 27796 1 + 8899380 T i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4418375 1 + 4432243 T i cebCap1.NW_016107581v1 C 0 C 0 s canFam3.chr2 79131088 1 - 85426708 C i canFam3.chr2 I 21228 C 0 s dasNov3.JH570393 1734155 1 - 2296528 T i dasNov3.JH570393 C 0 I 35183 e otoGar3.GL873538 19657258 14114 - 27850971 I a score=110923.000000 s hg38.chr3_KI270784v1_alt 171874 10 + 184404 TTTTGTGTTG s panTro5.chr3 64754 10 - 202621043 TTTTGTGTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 59681 10 - 205426864 TTTTGTGTTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 78164 10 + 508821 TTTTGTGTTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 215266 10 - 123690457 TTTTGTGTTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 46366 10 - 85730 TTTTGTGTTG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1455184 10 - 112612857 TTTTATGTTG i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 60004 10 + 4899514 TTTTGTGTTG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 59350 10 + 97742 TTTTGTGTTG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3710027 10 - 108555830 TTTTGTGTTG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 59377 10 + 85016 TTTTGTGTTG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1038426 10 - 1267912 TTTTGTGTTG i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46483310 10 - 47448759 TTTTGTGTTG i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 27797 10 + 8899380 TTTTGTGTTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4418376 10 + 4432243 TTTTGTGTTT i cebCap1.NW_016107581v1 C 0 C 0 s canFam3.chr2 79131089 10 - 85426708 TTTTGTATTT i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1769339 10 - 2296528 TTTTGTTTTT i dasNov3.JH570393 I 35183 C 0 e otoGar3.GL873538 19657258 14114 - 27850971 I a score=513897.000000 s hg38.chr3_KI270784v1_alt 171884 47 + 184404 ATATATTTACACCACAGAAGTAACTGTGATCTGGTGGAGA--ACTAGAA s panTro5.chr3 64764 47 - 202621043 ATATATTTACACCACAGAAGTAACTGTGATCTGGTGGAGA--ACTAGAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 59691 47 - 205426864 ATATATTTACACCACAGAAGTAACTGTGATCTGGTGGAGA--ACTAGAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 78174 47 + 508821 ATATATTTACACCACAGAAGTAACTGTGATCTGGTGGAGA--ACTAGAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 215276 47 - 123690457 ATATATTTACACCACAGAAGTAACTGTGATCTGGTGGAGA--ACTAGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 46376 47 - 85730 ATATATTTACACCACAGAAGTAACTGTGATCTGGTGGAGA--ACTAGAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1455194 47 - 112612857 ATATATTTACACCACAGAAGTAACTGTGATCTGATGGAGA--ACTAGAA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 60014 47 + 4899514 ATACATTTACACCACAGAAGTAACTGTGATCTGGTGGAGA--ACTAGAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 59360 47 + 97742 ATATATTTACACCACAGAAGTAACTGTGATCTGGTGGAGA--ACTAGAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3710037 47 - 108555830 GTATATTTACACCACAGAAGTAACTGTGATCTGATGGAGA--ACTAGAA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 59387 47 + 85016 ATATATTTACACCACAGAAGTAACTGTGATCTGGTGGAGA--ACTAGAA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1038436 47 - 1267912 ATATATTTACACCACAGAAGTAACTGTGATCTGGTGGAGA--ACTAGAA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46483320 47 - 47448759 ATATATTCACACCACACAAGTAACAGTGATCTGGTGGAGA--ACTAGAA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 27807 47 + 8899380 ATATATTTACACCACAGAAGTAACTGTGATCTGGTGGAGA--ACTAGAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4418386 47 + 4432243 ATATATTTATACCATAGAAATAACTGTGATCTGGTGAAGA--ACTAGAA i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19671372 42 - 27850971 ATATATTTACAGCAGAAAAGTAACTATGATTTGGCG-------TGAGAG i otoGar3.GL873538 I 14114 C 0 s canFam3.chr2 79131099 48 - 85426708 ATGT-TTTACATTAGAGAAGTAGCTGCAGTTTGGTGCAAAACACTAGTA i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1769349 47 - 2296528 TTATATTTATGCTAGAAAAGTAGCCATGGTGTAGTTGAAG--AACATAA i dasNov3.JH570393 C 0 I 500 a score=296555.000000 s hg38.chr3_KI270784v1_alt 171931 31 + 184404 GTAGAGTCAGAAGCCCTG--GGAACATCCTGCA s panTro5.chr3 64811 31 - 202621043 GTAGAGTCAGAAGCCCTG--GGAACATCCTGCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 59738 31 - 205426864 GTAGAGTCAGAAGCCCTG--GGAACATCCTGCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 78221 31 + 508821 GTAGAGTCAGAAGCCCTG--GGAACATCCTGCA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 215323 31 - 123690457 GTAGAGTCAGAAGCCCTG--GGAAAATCCTGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 46423 31 - 85730 GTAGAGTCAGAAGCCCTG--GGAAAATCCTGCA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1455241 32 - 112612857 GTAGAATTAGAAGCCCTG-AGGAAAATCCTGCA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 60061 31 + 4899514 GTAGAGTCAGAAGCCCTG--GGAAAATCCTGCA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 59407 31 + 97742 GTAGAGTCAGAAGCCCTG--GGAAAATCCTGCA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3710084 32 - 108555830 GTAGAATCAGAAGCCCTG-AGGAAAATCCTGCA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 59434 31 + 85016 GTAGAGTCAGAAGCCCTG--GGAAAATCCTGCA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1038483 31 - 1267912 GTAGAGTCAGAAGCTCTG--GGAAAATCCTGCA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46483367 32 - 47448759 GTAGAGTCAGAAGCCCTG-GGGAAAATCCTGCA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 27854 32 + 8899380 ATCGAGTCAAAAACCTTG-GGGAAAATCCTGCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4418433 32 + 4432243 GTAGAATCAGAAGACCTG-GGAAAAATCCTACA i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19671414 33 - 27850971 TTAGAATCAGAAGACTTGGGGGTAAATCCTAGA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79131147 32 - 85426708 ATGGAGTACAAAGACCTG-GGGAAAGTCCTGCA i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1769396 500 - 2296528 I a score=1351968.000000 s hg38.chr3_KI270784v1_alt 171962 132 + 184404 GCTTGCTTA-TA-TTTTTAACCTCTC-TT-TTT-----AAGAATTGTGAT-----AAGAAATTCATCAATGTATGTACGTAGAAGTGCT--TAGTACAATGTCTAGATTTATGA------------TTT---AGTAA-----ATGAAATTCTTATAACTGACT-AAAAA-- s panTro5.chr3 64842 132 - 202621043 GCTTGCTTA-TA-TTTTTAACCTCTC-TT-TTT-----AAGAATTGTGAT-----AATAAATTCATCAATGTATGTACGTAGAAGTGCT--TAGTACAATGTCTAGATTTATGA------------TTT---AGTAA-----ATGAAATTCTTATAACTGACT-AAAAA-- i panTro5.chr3 C 0 C 0 s panPan2.chr3 59769 132 - 205426864 GCTTGCTTA-TA-TTTTTAACCTCTC-TT-TTT-----AAGAATTGTGAT-----AATAAATTCATCAATGTATGTACATAGAAGTGCT--TAGTACAATGTCTAGATTTATGA------------TTT---AGTAA-----ATGAAATTCTTATAACTGACT-AAAAA-- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 78252 132 + 508821 GCTTGCTTA-TA-TTTTTAACCTCTC-TT-TTT-----AAGAATTGTGAT-----AATAAATTCATCAATGTATGTACGTAGAAGTGCT--TAGTACAATGTCTAGATTTATGA------------TTT---AGTAA-----ATGAAATTCTTATAACTGACT-AAAAA-- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 215354 131 - 123690457 GCTTGCTTA-TA-TTTTTAACCTCTC-TT-TTT-----AAGAACTGTGAT-----AAAAAATTCATC-ATGTATGTATGTAGAAGTGCT--TAGTACAATGTCTAGATTTATGA------------TTT---AGTAA-----ATGAAATTCTTATAACTGACT-AAAAA-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 46454 137 - 85730 GCTTGCTTA-TA-TTTTTAACCTCTC-TT-TTT-----AAGAATTGTGATAACTAAATAAGTTCATCAATGTATGTTTGTAGAAGTGCT--TAGTACAATGTCTAGATTTATGA------------TTT---AGTAA-----ATGAAGTTCTTATAACTGACT-AAAAA-- i rheMac8.chrUn_NW_014858614v1 C 0 I 2 s macFas5.chr15 1455273 137 - 112612857 GCTTGCTTA-TA-TTTTTAACCTCTCTTT-TTT-----AAGGATTGTGATAACTGAATAAGTTCATCAATGTATGTGTGTAGAAGTGCT--TAGTACAATGTCTAGATTTATGA------------TTT---AGTAA-----ATGTAATTCTTACAACTGACT--AAAA-- i macFas5.chr15 C 0 I 2 s macNem1.NW_012020287v1 60092 137 + 4899514 GCTTGCTTA-TA-TTTTTAACCTCTC-TT-TTT-----AAGAATTGTGATAACTAAATAAGTTCATCAATGTATGTTTGTAGAAGTGCT--TAGTACAATGTCTAGATTTATGA------------TTT---AGTAA-----ATGAAGTTCTTATAACTGACT-AAAAA-- i macNem1.NW_012020287v1 C 0 I 2 s cerAty1.NW_012005170v1 59438 137 + 97742 GCTTGCTTA-TA-TTTTTAACCTCTC-TT-TTT-----AAGAATTGTGATAACTAAATAAGTTCATCAATGTATGTTTGTAGAAGTGCT--TAGTACAATGTCTAGATTTATGA------------TTT---AGTAA-----ATGAAATTCTTATAACTGACT-AAAAA-- i cerAty1.NW_012005170v1 C 0 I 286 s chlSab2.chr12 3710116 138 - 108555830 GCTTGCTTG-TA-TTTGTAACCTCTC-TTCTTT-----AAGGAttgtgataattaaataagttcatgaatgtatgtatgtagaagtgct--tagtacaatgtctagATTTATGA------------TTT---AGTAA-----ATGTAATTCTTACAACTGACT-AAAAA-- i chlSab2.chr12 C 0 I 1 s manLeu1.NW_012101680v1 59465 138 + 85016 GCTTGCTTA-TA-TTTTTAACCTCTC-TT-TTT-----AAGAATTGTGATAACTAAATAAGTTCATCAATGTATGTTTGTAGAAGTGCT--TAGTACAATGTCTAGATTTATGA------------TTT---AGTAA-----ATGAAATTCTTATAACTGACTAAAAAA-- i manLeu1.NW_012101680v1 C 0 I 1 s colAng1.NW_012116822v1 1038514 137 - 1267912 GCTTGCTTA-TA-TTTTTAACCTCTC-TT-TTT-----AAGAATTGTGATAACTAAATAAGTTCATCAATGTATGTTTGTAGAAGTGCT--TAGTACAATGTCTAGATTTATGA------------TTT---AGTAA-----ATGAAATTCTTATAACTGACT-AAAAA-- i colAng1.NW_012116822v1 C 0 I 2 s calJac3.chr18 46483399 142 - 47448759 GCTTGCTTG-TA-TTTTTAACCTCTC-TT-TTTTTTAAAAGAATCTTGATAACTAAATCAGTTTATCAATGTATTTATGTAGAAGTGCT--TAGTACAATGTCTAGATTTATGA------------TTT---AGTGA-----ATGTAATTCTTATAACTGACT-AAAAA-- i calJac3.chr18 C 0 I 1 s saiBol1.JH378197 27886 138 + 8899380 GTTTACTTG-TATTTTTTAACCTCTC-TT-TTT-----AAGAATTGTGATAAGTAAGTAAGTTCATCAATACATGCATGTAGAAGTGCT--TAGTACAATGTCTAAATATATGA------------TTT---AGTAA-----ATATAATTCTTATAACTGACT-AAAAA-- i saiBol1.JH378197 C 0 I 1 s cebCap1.NW_016107581v1 4418465 138 + 4432243 GCTTGCTTA-TATTTTTTAACCTCTC-TT-TAT-----AAGAATTGTGATAACTAAATAATTTCATCAATGTATATTTGTGGAAATGCT--TAGTACAATGTCTAGATTTATGA------------TTT---AGAAA-----ATGTAATTCTTATAACTGACT-AAAAA-- i cebCap1.NW_016107581v1 C 0 I 1 s otoGar3.GL873538 19671447 142 - 27850971 GAATGCTTT-TA-TTTTCAACCTCTT-CT-TTT-----CAAAATTGTGCT-GTTGCATAAGTTCATTGA-----GTATATGGAAATTCT--TAGTACAATG-CCAGATTTATCaataaatataattttc---aataa-----atataattcttataattGACT-ATAAA-- i otoGar3.GL873538 C 0 I 2 s canFam3.chr2 79131179 139 - 85426708 GCTCACTTAGTA-TTTTTAACCTCCC-CA-TTC-----TGGAATTATGATAACTAAAAGAGATCATTAATGTATGC----AGAAGTGTTTATAGTATGATGCCTAGATTTGTCA------------TTTATCAGTAG-----ATATAATTCTTATAACTGACT-ATAGA-- i canFam3.chr2 C 0 I 2 s dasNov3.JH570393 1769896 141 - 2296528 gctttccTG-T--TTTTGAACCTCTA-TA-TTT---TATAGAAAtgtgataattaaatgagttacttggtgtataaat----aagtgct--tagtacaatgcctagttttatca------------gtt---atcaataactgtgtaattattaCAGTTGACT-ATAAAAA i dasNov3.JH570393 I 500 C 0 a score=248255.000000 s hg38.chr3_KI270784v1_alt 172094 33 + 184404 TGTT-------GA---GTCAAATCACAATAGAATATTATCAGG s panTro5.chr3 64974 33 - 202621043 TGTT-------GA---GTCAAATCACAATAGAATATTATCAGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 59901 33 - 205426864 TGTT-------GA---GTCAAATCACAATAGAATATTATCAGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 78384 33 + 508821 TGTT-------GA---GTCAAATCACAATAGAATATTATCAGG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 215485 33 - 123690457 TGTT-------GA---GTCAAATCACAATAGAATATTATCAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 46593 33 - 85730 TGTT-------GA---GTCAAATCACAATACAATATTATCAGG i rheMac8.chrUn_NW_014858614v1 I 2 I 313 s macFas5.chr15 1455412 33 - 112612857 TGTT-------TA---GTCAAATCACAATACAATATCATCAGG i macFas5.chr15 I 2 C 0 s macNem1.NW_012020287v1 60231 33 + 4899514 TGTT-------GA---GTCAAATCACAATACAATATTATCAGG i macNem1.NW_012020287v1 I 2 C 0 s chlSab2.chr12 3710255 33 - 108555830 TGTT-------GA---GTCAAATCACAATAGAATATGATCAGG i chlSab2.chr12 I 1 C 0 s manLeu1.NW_012101680v1 59604 33 + 85016 TGTT-------GA---GTCAAATCACAATACAATATTATCAGG i manLeu1.NW_012101680v1 I 1 I 315 s colAng1.NW_012116822v1 1038653 33 - 1267912 TGTT-------TA---GTCAAATCACAATACAATATTATCAGG i colAng1.NW_012116822v1 I 2 C 0 s calJac3.chr18 46483542 36 - 47448759 GTTA-------AAAGTGTCTAATCACGATAGAATATTATCAGG i calJac3.chr18 I 1 C 0 s saiBol1.JH378197 28025 32 + 8899380 GGTT-------GA---GTGAAATCAAAATAGACTATAAT-AAA i saiBol1.JH378197 I 1 C 0 s cebCap1.NW_016107581v1 4418604 33 + 4432243 GGTT-------GA---GTCAAATCACAATAGAATGTTATCAGG i cebCap1.NW_016107581v1 I 1 C 0 s otoGar3.GL873538 19671591 40 - 27850971 TGTTAGTAGAAAA---GTAGAATGTCTATAGAATATTCTCAGG i otoGar3.GL873538 I 2 C 0 s canFam3.chr2 79131320 37 - 85426708 TGTT---ACAAAA---GTAGAACATCTATGGAATATTCTCAGG i canFam3.chr2 I 2 C 0 s dasNov3.JH570393 1770037 37 - 2296528 TATT---AGAAAC---ATAGAATATCTATAGAATATTCTCAGA i dasNov3.JH570393 C 0 C 0 e cerAty1.NW_012005170v1 59575 286 + 97742 I a score=124457.000000 s hg38.chr3_KI270784v1_alt 172127 12 + 184404 -GAAACAGAACTT s panTro5.chr3 65007 12 - 202621043 -GAAACAGAACTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 59934 12 - 205426864 -GAAATAGAACTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 78417 12 + 508821 -GAAACAGAACTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 215518 12 - 123690457 -GAAACAGAACTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 46939 12 - 85730 -GAAACAGAACTT i rheMac8.chrUn_NW_014858614v1 I 313 C 0 s macFas5.chr15 1455445 12 - 112612857 -GAAACAGAACTT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 60264 12 + 4899514 -GAAAGAGAACtt i macNem1.NW_012020287v1 C 0 I 321 s cerAty1.NW_012005170v1 59861 12 + 97742 -GAAACAGAACTT i cerAty1.NW_012005170v1 I 286 C 0 s chlSab2.chr12 3710288 12 - 108555830 -GAAACAGAACTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 59952 12 + 85016 -GAAACAGAACTT i manLeu1.NW_012101680v1 I 315 C 0 s colAng1.NW_012116822v1 1038686 12 - 1267912 -GAAACAGAACTT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46483578 12 - 47448759 -GAAGCATAACTT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 28057 12 + 8899380 -AAAACAGAACTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4418637 12 + 4432243 -GAAACAGAACTT i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19671631 12 - 27850971 -AAAAAGGAACTT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79131357 9 - 85426708 -AAAAAATAA--- i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1770074 13 - 2296528 AAAAAAGGAACTT i dasNov3.JH570393 C 0 C 0 a score=47102.000000 s hg38.chr3_KI270784v1_alt 172139 7 + 184404 CTAAAAC s panTro5.chr3 65019 7 - 202621043 CTAAAAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 59946 7 - 205426864 CTAAAAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 78429 7 + 508821 CTAAAAC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 215530 7 - 123690457 TTAAAAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 46951 7 - 85730 TTAAAAC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1455457 7 - 112612857 TCAAAAC i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 59873 7 + 97742 TTAAAAC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3710300 7 - 108555830 TTAAAAC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 59964 7 + 85016 TTAAAAC i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1038698 7 - 1267912 TTAAAAC i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46483590 7 - 47448759 TAAAAAC i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 28069 7 + 8899380 TAAACAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4418649 7 + 4432243 TAAAAAC i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19671643 5 - 27850971 --AGATC i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1770087 7 - 2296528 AGAAAAC i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79131366 0 - 85426708 C e macNem1.NW_012020287v1 60276 321 + 4899514 I a score=822822.000000 s hg38.chr3_KI270784v1_alt 172146 81 + 184404 TTTGAGAAATTTTATCGGTCCAAATACACGTGGAGGTAAAGCTCTTACTACAGGGTGG-TATCTGGGTTAGATATCAGAGTA s panTro5.chr3 65026 81 - 202621043 TTTGAGAAATTTTATCTGTCCAAATACACGTGGAGGTAAAGCTCTTACTACAGGGTGG-TATCTGGGTTAGATATCAGAGTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 59953 81 - 205426864 TTTGAGAAATTTTATCTGTCCAAATACACGTGGAGGTAAAGCTCTTACTACAGGGTGG-TATCTGGGTTAGATATCAGAGTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 78436 81 + 508821 TTTGAGAAATTTTATCTGTCCAAATACACGTGGAGGTAAAGCTCTTACTACAGGGTGG-TATCTGGGTTAGATATCAGAGTA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 215537 79 - 123690457 TTCGAGAAATTTTATCTGTCCAAATACACGTGGAGGTAAAGCTCTTACTATAGGGTGG-TATCTGGGTTAGATAT--GAGTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 46958 81 - 85730 TTTGAGAAATTTTATCTGTCCAAATACATGTGGAGGTAAAGCTTTTACTATAGGGTGG-TGTCTGGGTTAGGTATCAGGGTA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1455464 81 - 112612857 TTTGAGAGATTTTATCTGTCCAAATAGATGTAGAGGTAAAGCTCTTACTATGGGGTGG-TGTCTGGGTTAGATATCAGAGTA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 60597 81 + 4899514 TTTGAGAAATTTTATCTGTCCAAATACACGTGGAGGTAAAGCTTTTACTATAGGGTGG-TGTCTGGGTTAGGTATCAGGGTA i macNem1.NW_012020287v1 I 321 C 0 s cerAty1.NW_012005170v1 59880 81 + 97742 TTTGAGAAATTTTATCTGTCCAAATACACGTGGAGGTAAAGCTTTTACTATTGGGTGG-TGTCTGGGTTAGGTATCAGAGTA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3710307 81 - 108555830 TTTGAGAAATTTTATCTGTCCAAATACACATGGAGGTAAAGCTTTTACTATAGGGTGG-TGTCTGGGTTAGATATCAGAGTA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 59971 81 + 85016 TTTGAGAAATTTTATCTGTCCAAATACACGTGGAGGTAAAGCTTTTACTATTGGGTGG-TGTCTGGGTTAGGTATCAGAGTA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1038705 81 - 1267912 TTTGAGAAATTTTATCTGTCCAAATACAGGTGGAGGTAAAGCTTTTACTATAGGGTGG-TGTCTGGGTTAGATATCAGAGTA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46483597 79 - 47448759 --TGAGAAGTTTTATCTCTCTAAATATACACAGATGTAACACTCTTGCTATAGGGCTG-TGTATGGCTTAGATACTGGAGTA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 28076 81 + 8899380 TTTGAGAAATTTTATCTGTCCAAATACACGTGGAGGTAAAGCTCTTACTATAGGGTGA-TGTCTGGGTTAGATATCACAGTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4418656 81 + 4432243 TTTGAGAAATTTTATCTGTCCAAATACACGTGGAGGTAAAGCTGTTACTATAGGGTGA-TGTCTGGGTTAGATATCAGAGTA i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19671648 78 - 27850971 TTAGGGAAATTTT---CATCAGAATATAAGCAGAATTAAAGCATTTACTGTACAGTAG-TATGTAGGTTAAATAGCAGAATG i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79131366 74 - 85426708 TTTTAGGAAATTAATCTGTCCAAATATATGCAGAGCTAAGTATTTTCCTGTGGA--------CTGTGTTCGATATCAGAGTG i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1770094 82 - 2296528 TTTAAGAAATTTAATCTGTCCAAATATATGCAACGCTAAGGTTCTTAATGTAGTATAGTTGTGTAGATTAGATATCAAATTG i dasNov3.JH570393 C 0 I 1722 a score=3717870.000000 s hg38.chr3_KI270784v1_alt 172227 385 + 184404 TAAATGCAATTTCCTTTTTCCAATattttaatttagtcaaatttgttaatattttactttatgctt------------tgagtttgttgtaattcagagaaaggcttttccaattctgatattctt---aacagttctcta----------------gtgtgt------atgtgtgtgtttttagttttatggattca-ttgacttcaaataaagttttgaactttttgaaatttatgctct--ttaaggt-tcaaggttttgcttcaactt-----tttctccagttggatatccacttacagcaactt--tt--aATTGCATGAATGTACAGGTTGTTCTTTCACTTCAGAGATAAACATGATATGTTATTTTATTGAGTGCTAGCTGAAAATTTCTTTTGTTTTATTTAAGATTTTCAAAGTTATAGAAAAA s panTro5.chr3 65107 385 - 202621043 TAAATGCAATTTCCTTTTTCCAATATTTTAATTTAGTCAAATTTGTTAATATTTTACTTTATGCTT------------TGAGTTTGTTGTAATTCAGAGAAAGGCTTTTCCAATTCTGATATTCTT---AACAGTTCTCCA----------------GTGTGT------ATGTGTGTGTTTTTAGTTTTATGGATTCA-TTGACTTCAAATAAAGTTTTGAACTTTTTGAAATTTATGCTCT--TTAAGGT-TCAAGGTTTTGCTTCAACTT-----TTTCTCCAGTTGGATATCCACTTACAGCAACTT--TT--AATTGCATGAATGTACAGGTTGTTCTTTCACTTCAGAGATAACCATGATATGTTATTTTATTGAGTGCTAGCTGAAAATTTCTTTTGTTTTATTTAAGATTTTCAAAGTTATAGAAAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 60034 385 - 205426864 TAAATGCAATTTCCTTTTTCCAATATTTTAATTTAGTCAAATTTGTTAATATTTTACTTTATGCTT------------TGAGTTTGTTGTAATTCAGAGAAAGGCTTTTCCAATTCTGATATTCTT---AACAGTTCTCTA----------------GTGTGT------ATGTGTGTGTTTTTAGTTTTATGGATTCA-TTGACTTCAAATAAAGTTTTGAACTTTTTGAAATTTATGCTCT--TTAAGGT-TCAAGGTTTTGCTTCAACTT-----TTTCTCCAGTTGGATATCCACTTACAGCAACTT--TT--AATTGCATGAATGTACAGGTTGTTCTTTCACTTAAGAGATAACCATGATATGTTATTTTATTGAGTGCTAGCTGAAAATTTCTTTTGTTTTATTTAAGATTTTCAAAGTTATAGAAAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 78517 385 + 508821 TAAATGCAATTTCCTTTTTCCAATATTTTAATTTAGTCAAATTTGTTAATATTTTACTTTATGCTT------------TGAGTTTGTTGTAATTCAGAGAAAGGCTTTTCCAATTCTGATATTCTT---AACCGTTCTCTA----------------GTGTGT------ATGTGTGTGTTTTTAGTTTTATGGATTCA-TTGACTTCAAATAAAGTTTTGAACTTTTTGAAATTTATGCTCT--TTAAAGT-TCAAGGTTTTGCTTCAACTT-----TTTCTCCAGTTGGATATCCACTTACAGCAACTT--TT--AATTGCATGAATGTACAGGTTGTTCTTTCACTTCAGAGATAACCATGATATGTTATTTTATTGAGTGCTAGCTGAAAATTTCTTTTGTTTTATTTAAGATTTTCAAAGTTATAGAAAAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 215616 383 - 123690457 TAAATGCAATTTCCTTTTTCCAATATTTTAATTTAGTCAAATTTGTTAATATTTTACTTTATGCTT------------TGAGTTTGTTGTAATTCAGAGTAAGGCTTTTCCAATTCTGATATTCTT---AAAAATTCTCTA----------------GTGTGT------ATGTGCGTGTTTTTAGTTTTATGGATTCA-TTGACTTCAAATAAAGTTTTGAACTTTTTGAAATTTATGCTCT--TTAAGGT-TCAAGGTTTTGCTTCAACTT-----TTTCTCCAGTTGGATATCCACTTACAGCAACTT--TT--AACTGCATGAATGTACAGGTTGTTCTTTCAC--CAGAGATAACCATGATATGTTATTTTATTGAGTGCTAGCTGAAAATTTCTTTTGTTTTATTTAGGATTTTCAAAGTTACAGAAAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 47039 383 - 85730 TAAATGCAATTTCCTTTTTCCAATATTTTAATTTAGTCAAATTAGTTAATATTTTACTTTATGCTT------------TGACTTTGTTGTAATTCAGAGAAAGGCTTTTCCAATTCTGATATTCTT---AAAAATTCTCCA----------------GTGTGT------ATGTGTGTGTTTTTAGTTTTATGGATTCA-TTGACTTCAAATAAATTTTTGAACTTTTTGAAATTTATGCTCT--GTAAGGT-TCAAGGTTTTGCTTCAACTT-----TTTTTCCAGTTGGATATCCACTTACAGCAACTT--TT--AATTGCATGAATGTACAGGTTGTTCTTTCACTTCAGAGATAACCATG--ATGTTATTTTATTGAGTGCTAGCTGAAAATTTCTTTTGTTTTATTTAGGATTTTCAAAGTTATGGAAAAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1455545 407 - 112612857 TAAATGCAGTTTTCTTTTTCCAAGATTTTAATTCAGTCAAATTTTTTAGCATTTAACTTTATGCTT------------TGAGTTTGTTGTAATTCAGAGAAAGGCTTTTCCAATTCTGATATTCTT---AAAAATTCTCgagagagagagagagagTGTGTGTGCGCACGTGTGTGTGTGTTTACTTTTATGGATCCA-TTGACTTCAAATAAACTTTTGAACTTTTTGAAATGTATGTTCT--CTAAGGT-TCAAGGTTTTGCTTCAACTT-----TTTCTCCAGTTGGATATCCACTTACAGCAACTT--TT--AATTGCATGAATGTACAGGTTGTTCTCTCACTTCAGAAATAACCCTGATATGTTATTTTATTGAATACTAGTTAAAAGTTTGTTTTGTTTTATTTAGGATTCTCAAAGTTATCAAAAAA i macFas5.chr15 C 0 I 3 s macNem1.NW_012020287v1 60678 383 + 4899514 TAAATGCAATTTCCTTTTTCCAATATTTTAATTTAGTCAAATTAGTTAATATTTTACTTTATGCTT------------TGACTTTGTTGTAATTCAGAGAAAGGCTTTTCCAATTCTGATATTCTT---AAAAATTCTCCA----------------GTGTGT------ATGTGTGTGTTTTTAGTTTTATGGATTCA-TTGACTTCAAATAAATTTTTGAACTTTTTGAAATTTATGCTCT--GTAAGGT-TCAAGGTTTTGCTTCAACTT-----TTTTTCCAGTTGGATATCCACTTACAGCAACTT--TT--AATTGCATGAATGTACAGGTTGCTCTTTCACTTCAGAGATAACCATG--ATGTTATTTTATTGAGTGCTAGCTGAAAATTTCTTTTGTTTTATTTAGGATTTTCAAAGTTATGGAAAAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 59961 383 + 97742 TAAATGCAATTTCCTTTTTCCAATATTTTAATTTAGTCAAATTAGTTAATATTTTACGTTGTGCTT------------TGAGTTTGTTGTAATTCAGAGAAAGGCTTTTCCAATTCTGATATTCTT---AAAAATTCTCCA----------------GTGTGT------ATGTGTGTGTTTTTAGTTTTATGGATTCA-TTGACTTCAAATAAATTTTTGAACTTTTTGAAATTTACGCTCT--GTAAGGT-TCAAGGTTTTGCTTCAACTT-----TTTCTCCAGTTGGATATCCACTTACAGCAACTT--TT--AATTGCATGAATGTACAGGTTTTGCTTTCACTTCAGAGATAACCATG--ATGTTATTTTATTGAGTGCTAGCTGAAAATTTCTTTTGTTTTATTTAGGATTTTCAAAGTTATGGAAAAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3710388 393 - 108555830 TAAATGTAATTTTCTTTTTTTAAGATTTTAATTTAGTCAAAATTTTTAACATTTAACTTTATGCTT------------TGAGTTTGTTGTAATTCAGAGAAAGGTTTTTCCAATTCTGATATTCTT---AAAAATTCTCTA--GAGAGAgtgtgtgtgtgtgt------gtgtgtgtgtgtTTACTTTTATGGATTCA-TTGACATCAAATAAATTTGTGAACTTTTTGAAATGTATGC------TAAGGT-TCAAGGTTTTACTTCAACTT-----TTTCTCCAGTTTGATATCCACTTACAGCAACTT--TT--AATTGCATGAATGTACAGGTTGTTCTTTCACTTCAGAGATAACCATG--ATGTTATTTTATTGAGTGCTAGCTAAAAATTTGTTTTGTTTTATTTAGGATTCTCAAAGTTATGGAAGAA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 60052 383 + 85016 TAAATGCAATTTCCTTTTTCCAATATTTTAATTTAGTCAAATTAGTTAATATTTTACTTTATGCTT------------TGAGTTTGTTGTAATTCAGAGAAAGGCTTTTCCAATTCTGATATTCTT---AAAAATTCTCCA----------------GTGTGT------ATGTGTGTGTTTTTAGTTTTATGGATTCA-TTGACTTCAAATAAATTTTTGAACTTTTTGAAATTTATGCTCT--GTAAGGT-TCAAGGTTTTGCTTCAACTT-----TTTCTCCAGTTGGATATCCACTTACAGCAACTT--TT--AATTGCATGAATGTACAGGTTTTGCTTTCACTTCAGAGATAACCATG--ATGTTATTTTATTGAGTGCTAGCTGAAAATTTCTTTTGTTTTATTTAGGATTTTCAAAGTTATGGAAAAA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1038786 381 - 1267912 TAAATGCAATTTCCTTTTTCCAATATTTTAATTTAGTCAAATTAGTTAATATTTTACTTTATGCTT------------TGAGTTTGCTGTAATTCAGAGAAAGGCTTTTCCAATTCTGATATTCTT---AAAAATTCTCCA----------------GTGTGT------ATGTGTGTGT-TTTAGTTTTATGGATTCA-CTGACTTCAAATAAATATTTGAACTTTTTGAAATTTATGCTCT--GTAAGGT-TCAAGGTTTTGC-TCAACTT-----TTTCTCCAGTTGGATATCCACTTACAGCAACTT--TT--GATTGCATGAATGTATGGGTTGTTCTTTCACTTCAGAGATAACCATG--ATGTTATTTTATTGAGTGCTAGCTGAAAATTTCTTTTGTTTTATTTAGGATTTTCAAAGTTATGGAAAAA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46483676 374 - 47448759 TAAATGCAATTTTCTTTTTCCAATATTTTAATTTAGTCAAATTTGTGAATATTTTACTTCATGCTT------------TGAGTTTGTTGTAATTCAGAGTAAGGCTTTTACAATTCTGACATTCTT---AAAAATTCTCTA----------------GCATGT--------GCTTTTCTTTTAACTTTTATGTATTCA-TTGACTTCAGATAAATTTTTGAACTTCTTGAAGTTTATGCTCT--CTAAGGG---AAGGTTTTGCTTCTACTT-----TTTTTCCAGTTGGATATCCACTTACAGCATCCT--TTTAAATTGCTTGAAAGTACAGGGTGTTCTTTCACTTCACAGGTAACCATGATAT---------TTGAGTGCTAGCTAAACATTTCTTTTGTTTTATTTAGGATTTTCAAAGTCATGGAAAAA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 28157 379 + 8899380 TAAATGCAATTTTCTTTTTTCAATGTTTTAATTTAGTCAACAGTTTTAATATTTTATTTTATGCTT------------TGAGTTTGTTGTAATTCAGAGAAAGGCTTTTCCATTTCTGATATTCCT---GAAAATTCTCAA----------------GTATGT--------GTGTAATTTTTTACTGCTGTGGATTCT-TTGACTTCAAATAAAGTTTTGAACTTTGTGAAATTTATG------CTAAGGT-TCAAGGTTTTGCTTCAAGTT-----TTTCTCCAGCTGGATATCCACTTATAGCAACTT--TT--AATTGCATAAATGTACAGGTTGTTCATTCACTTCAGAGATAATCATGATATGTTACTTTATTGAGTGCTGGCTAAAAATTTCTTTTGTTTTATTTAGGAGTGTCAACATTATGGAAAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4418737 366 + 4432243 TAAATGCAGTTTTCTTTTTCCAATGTTTTAATTTAGTCAAATTTGTTAATATTTTACTTTATGCTT------------TGAGTTTGTTATAATTCAGAGAAAGGCTTTTTCAATTCTGATATCCTT---AAAAATTCTCTA----------------ATGCGT--------GTG-----------TTTTATTGATTCA-TTGACTTCAAACAAATTTTTGAACTTTTTGAAATTTATG------CTAAGGG-TCAAGATTTTGCCTCAACTA-----TTTCTCTAGTTGGATATGCACTTACAGCAACTT--TT--AATTGCATGAAGGTACAGGTTGTTCATTCACTTTAGATATAACCATGATATGTTATTTTAATGAATGGTAGCTAAAAATTTCTTTTGTTTTATTTAGGATTTTCAAAGTTATT--AAAA i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19671726 333 - 27850971 TAAACTAAATT--------------TTTTAATGTAGTCAAAGTTATTAATCTTTTATAC----CTT------------TGGTTTTGTTGTAATTCAGAGAATGGAATTTTCAATTCTGAGATTCTT---AAAAATTCTATA----------------GTG-GT-------------------------------------TGTCTTCAAATAAATTTTTGAACTCCAGGGAATTTATGCTGT--ATAAGGTTTTGATGTTTTAATTCAATGG-----TTTTTCTGTTTGGATATCCACTTATTGCAAC--------ACTTGTATTAATATACAGGTTATTCTTTAATTACAGAGGAAATTATGATATGCCATTTTACTGAGTGCTAGCTAAAAGTTTCCTCTGATTTCTTTAGACTTCTTATGGCCATGAAAAAG i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79131440 375 - 85426708 TAAACTCAA----------------TTTTAGTGTAGTCAGATGTATTAGTCTTTTTTTTTTTTTTTTTTTAGGCCTTCTGGGTTTGTTGTAAATCAGAGAaagacctttccaattctgagattctT---AGAATTTTGTCA----------------TGATTT-------------CTTTTTTCCTTTCATGCATTCA-TTGTCTTCAATTACATTTTTGAACTTTGGggaatttatgcttgtataaaggt-ttgaggcttgaatccaacttta-tgtttttctagttggatatccacttactgcaacct-att--cattgtataaa--cagagattattttttAATTTCAGAGAAAATCATG--ATGTCATTTTATTGAGTTCCAACTAAAAGACTC--TCATTTTACTTAGGCTTCTCCTACTCATGAAAAAG i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1771898 387 - 2296528 taaacccaattttttaactcaattttaaaaatgtagtctaattttttaagctttattttgctcctt-----------ctgggtttgttataattcagagaaagacatttccaattctgagattctttaaaaaaattctctt----------------atg-gt-----------ttctttttcacattcttgggttcattttttttctattaaatttttgtattattaggaatttatg------ctaagat-gtgaggtttggatccaactttattttttttccagttggatatctacttgtgggaggctcatt--tattATATAAATCTATAAGTTATTTTTTATTTTCAGAGGAAATCATGATATGTCATTTTAGTGAGTGGTAACTAAAAGATTGCTTTGTTTTACTTAGGTTTCTGATAGTCATGAAAAAG i dasNov3.JH570393 I 1722 C 0 a score=5023763.000000 s hg38.chr3_KI270784v1_alt 172612 570 + 184404 AGAAGGATGTGATATATACAAATTGCATATTGAAGGGAGATATTGCCACACTCAAACAGGAATAATACACAATAAAAAATGACAGTGTCAAAAAGGAAAAGGAATATATTCAGGAAATTAAGAGTATTAGAGAAATAAATGCTAACTTTGAAAAAAGTGCAAGACTCAATGAGGAAA---T---GACAACAAAAACGATGTCCCAGTATTGTCAACAGCTTAATGGCCTCAAAGCTGAGAATACAAGGCTGAATTCAAAATTGGAGAAGGAAGAACACCACACAGATGGACTGGAAGCTGAAGTTGAATTCTTCCATTCTAGGCTGGCTGCTGCTATAAATGAGCACAATGAAAGT---TTAGAAACGAAAGACCTAGAACTTGTTTTACAGAGAGCACATAAT------TTTTCCGTACAT----AAAAAAATAAGTTCTACTGTTTCTCAACTAAAAGATAAAAATGAGTTGCTTACTGAACAATTTTCTAAAGCTCAGATGAAGTTCAATACCTTAAAAGGTAAGCTCCATGAGATAAGAGATGCTCTCAGGGAAAAGACATTGGCTTTAGAAAGTGTACAGATGG s panTro5.chr3 65492 570 - 202621043 AGAAGGATGTGATATATACAAATTGCATATTGAAGGGAGATATTGCCACACTCAAACGGGAATAATACACAATAAAAAATGACAGTCTCAAAAAGGAAAAGGAATATATTCAGGAAATTAAGAGTATTAGAGAAATAAATGCTAACTTTGAAAAAAGTGCAAGACTCAATGAGGAAA---T---GACAACAAAAACGATGTCCCAGTATTGTCAACAGCTTAATGGCCTCAAAGCTGAGAATACAAGGCTGAATTCAAAATTGGAGAAGGAAGAACACCACACAGATGGACTGGAAGCTGAAGTTGAATTCTTCCATTCTAGGCTGGCTGCTGCTATAAATGAGCACAATGAAAGT---TTAGAAACGAAAGACCTAGAACTTGTTTTACAGAGAGCACATAAT------TTTTCTGTACAT----AAAAAAATAAGTTCTACTGTTTCTCAACTAAAAGATAAAAATGAGTTGCTTACTGAACAATTTTCTAAAGCTCAGATGAAGTTCAATACCTTAAAAGGTAAGCTCCATGAGACAAGAGATGCTCTCAGGGAAAAGACATTGGCTTTAGAAAGTGTACAGATGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 60419 570 - 205426864 AGAAGGATGTGATATATACAAATTGCATATTGAAGGGAGATATTGCCACACTCAAACGGGAATAATACACAATAAAAAATGACAGTCTCAAAAAGGAAAAGGAATATATTCAGGAAATTAAGAGTATTAGAGAAATAAATGCTAACTTTGAAAAAAGTGCAAGACTCAATGAGGAAA---T---GACAACAAAAACGATGTCCCAGTATTGTCAACAGCTTAATGGCCTCAAAGCTGAGAATACAAGGCTGAATTCAAAATTGGAGAAGGAAGAACACCACACAGATGGACTGGAAGCTGAAGTTGAATTCTTCCATTCTAGGCTGGCTGCTGCTATAAATGAGCACAATGAAAGT---TTAGAAACGAAAGACCTAGAACTTGTTTTACAGAGAGCACATAAT------TTTTCTGTACAT----AAAAAAATAAGTTCTACTGTTTCTCAACTAAAAGATAAAAATGAGTTGCTTACTGAACAATTTTCTAAAGCTCAGATGAAGTTCAATACCTTAAAAGGTAAGCTCCATGAGACAAGAGATGCTCTCAGGGAAAAGACATTGGCTTTAGAAAGTGTACAGATGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 78902 570 + 508821 AGAAGGATGTGATATATACAAATTGCATATTGAAGGGAGATATTGCCACACTCAAACGGGAATAATACACAATAAAAAATGACAGTCTCAAAAAGGAAAAGGAATATATTCAGGAAATTAAGAGTATTGGAGAAATAAATGCTAACTTTGAAAAAAGTGCAAGACTCAATGAGGAAA---T---GATAACAAAAACAATGTCCCAGTATTGTCAACAGCTTAATGGCCTCAAAGCTGAGAATACAAGGCTGAATTCAAAATTGGAGAAGGAAGAATGCCACACAGATGGACTGGAAGCTGAAGTTGAATTCTTCCATTCTAGGCTGGCTGCTGCTATAAATGAGCACAATGAAAGT---TTAGAAACGAAAGACCTAGAACTTGTTTTACAGAGAGCACATAAT------TTTTCTGTACAT----AAAAAAATAAGTTCTACTGTTTCTCAACTAAAAGATAAAAATGAATTGCTTACTGAACAATTTTCTAAAGCTCAGATGAAGTTCAATACCTTAAAAGGTAAGCTCCATGAGACAAGAGATGCTCTCAGGGAAAAGACATTAGCTTTAGAAAGTGTACAGATGG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 215999 570 - 123690457 AGAAGGATGTGATATATGCAAATTGCATGTTGAAGGGAGATATTGCCACACTCAAACGGGAATGATACACAATAAAAAATGACAATCTCAAAAAGGAAAAGGAATATATTCAGGAAATTAAAAGTATTAGAGAAATAAATGCTAGCTTTGAAAAGAGTGCAGGACTCAGTGAGGAAA---T---GATAACAAAAACTATGTCCCAGTATTGTCAACAGCTTAATGGCCTCAAAGCTGAGAATACAAGGCTGAATTCCAAATTGGAGAAGGAAGAACACCACACAGACGGACTGGAAGCTGAAGTTGAATTCTTCCATTCTAGGCTGGCTGCTGCTATAAATGAGCACAATGAAAGT---GTAGAAACAAAAGACCTAGAACTTGTTTTAGAGAGAGCACATAAT------TTTTCTGTACAT----AAAAAAATAAGTTCTACTATTTCTCAACTAAAAGATAAAAATGAGTTGCTTACTGAACAATTTTCTAAAGCTCAGATGAAGTTCAATACCTTAAAAGGTAAGCTCCATGAGACAAGAGATGCTCTCAGGGAAAAGACATTGGCTTTAGAAAGTGTGGAGATGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 47422 573 - 85730 AGAAGGATGTGATATATACAAATTGCATGTTGAAGGGAGATATTGCCACACTCAGATGGGAATTATATGTAATAAAAAATGACAATCTCAAAAAGGAAAAGGAATATATTCAGGAAATTAAAAGTATTAGAGAAATAAATGCTAACTTTGAAAAGAGTGCAAGACTCAGTGAGAAAA---TAACAACAACAAAAAAAAAGTCCCAGTGTTGGCAACAGCTTAATGACCTCAAAGCTGCGAATACAAGGCTGAATTCAAAATTGGAGAAGGAAAAACACCGCACAGACAGACTGGAAGCTGAAGTTGAATTCCTCCATTCTAGACTGGCTGCTGCCATGAATGAGCACAATGAAAGT---GTAGAAACAAAAAGCCTAGAATTCGTTTTACAGAGAGCACATAAT------TTTTCTGTACGT----AAAAAAATGAGTTCTACTATTTCTCAACTAAAAGATAAAAATGAGTTGCTAACTGAACAATTTTCTAAAGCTGGGATGAAGTTAAATACCTTAAAAGGTAAGCTCCATGAGACAAGAGATGCTCTCAGGGAAAAGACATTGGCTTTCGAAAGTGTGCAGATGC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macNem1.NW_012020287v1 61061 569 + 4899514 AGAAGGATGTGATATATACAAATTGCATGTTGAAGGGAGATATTGCCACACTCAGATGGGAA-TATATGTAATAAAAAATGACAATCTCAAAAAGGAAAAGGAATATATTCAGGAAATTAAAAGTATTAGAGAAATAAATGCTAACTTTGAAAAGAGTGCAAGACTCAGTGAGAAAA---T---AACAACAAAAAAAAAGTCCCAGTGTTGGCAACAGCTTAATGACCTCAAAGCTGCGAATACAAGGCTGAATTCAAAATTGGAGAAGGAAAAACACCGCACAGACAGACTGGAAGCTGAAGTTGAATTCCTCCATTCTAGACTGGCTGCTGCCATGAATGAGCACAATGAAAGT---GTAGAAACAAAAAGCCTAGAATTCGTTTTACAGAGAGCACATAAT------TTTTCTGTACAT----AAAAAAATGAGTTCTACTATTTCTCAACTAAAAGGTAAAAATGAGTTGCTAACTGAACAATTTTCTAAAGCTGGGATGAAGTTAAATGCCTTAAAAGGTCAGCTCCATGAGACAAGAGATGCTCTCAGGGAAAAGACATTGGCTTTAGAAAGTGTGCAGATGC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 60344 567 + 97742 AGAAGGATGTGATATATACAAATTGCATGTTGAAGGGAGATATTGCCACACTCAGATAGGAATTATATGTAATAAAAAATGACAATCTCAAAAAGGAAAAGGAATATATTCAGGAAATTAAAAGTATTAGAGAAATAAATGCTAACTTTGAAAAGAGTGCAAGACTCAATGAGAAAA---T------AACAAAAAAAAGGTCCCAGTGTTGGCAACAGCTTAATGACCTCAAAGCTGTGAATACAAGGCTGAATTCAAAATTGGAGAAGGAAAAACACCGCACAGACAGACTGGAAGCTGAAGTTGAATTCCTCCATTCTAGACTGGCTGCTGCTATGAATGAGCACAATGAAAGT---GTAGAAACAAAAAGTCTAGAATTCGTTTTACAGAGAACATATAAT------TTTTCTGTGCAT----AAAAAAATGAGTTCTACTATTTCTCAACTAAAAGATAAAAATGAGTTGCTTACTGAACAATTTTCTAAAGCTGGGATGAAGTTAAATACCTTGAAAGGTAAGCTCCATGAGACAAGAGATGCTCTCAGGGAAAAGACATTGGCTTTAGAAAGTGTGCAGATGC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3710781 570 - 108555830 AGAAGGATGTGATGTATGGAAATTACATGTTGAAGAGAGACATTGCCATGCTCAAACAGGAATTATACACAATAAAAAATGACAGTCTCAGAAAGGAAAAAGAATATTTTCAGGAAATTAAAAGTATTACAGAAATGAATGCTAACTTTGAAAAGAGTGTAAGACTCAATGACGAAATGGT------AACAAAAACAACGGCCCAGTATTCGCAACAGCTTAATGAACTGAAAGCTGAGAATACAAGGCTGAATTCAAAATTGGAGAAGGAAAAACACAACAAAGCAAGACTAGAAGCTGAAGTTGAATCCCTCCATTCTAGCCTGGCCACTGCTATAAATGAGTACAATGACATT---TTGGAAAGAAAAGACCTGGAACTAGTTTTATGGAGAGCAGATGAT------GTTTCTGGACAT----GGAAAAATGGATTCCAATATTTCTCAACTAACAGATAAGAATAAGTTGCTTACCGAACAACTTTCTAAAGCTCGGGTGAAGTTCAATACCTTAAAAGGTAAGCTCCATGAGACAAGAGATGCTCTCAAGGAAAAGACACTGGCTTTAGAAAGTGTACAGATAG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 60435 567 + 85016 AGAAGGATGTGATATATACAAATTGCATGCTGAAGGGAGATATTGCCACACTCAGATAGGAATTATATGTAATAAAAAATGACAATCTCAAAAAGGAAAAGGAATATATTCAGGAAATTAAAAGTATTAGAGAAATAAATGCTAACTTTAAAAAGAGTGCAAGACTCAATGAGAAAA---T------AACAAAAAAAAGGTCCCAGTGTTGGCAACAGCTTAATAACCTCAAAGCTGTGAATACAAGGCTGAATTCAAAATTGGAGAAGGAAAAACACCGCACAGACAGACTGGAAGCTGAAGTTGAATTCCTCCATTCTAGACTGGCTGCTGCTATGAATGAGCACAATGAAAGT---GTAGAAACAAAAAGTCTAGAATTCGTTTTACAGAGAGCATATAAT------TTTTCTGTGCAT----AAAAAAATGAGTTCTACTATTTCTCAACTAAAAGATAAAAATGAGTTGCTTACTGAACAATTTTCTAAAGCTGGGATGAAGTTAAATACCTTAAAAGGTAAGCTCCATGAGACAAGAGATGCTCTCAGGGAAAAGACATTGGCTTTAGAAAGTGTGCAGATGC i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1039167 562 - 1267912 AGAAGGATGTGATATATACAAATTGCATGTTGAAGGGAGATATTGCCACACTCAGATGGGAATTATATGTAATAAAAAATGACAGTCTCAAAAAGGAAAAGGAATATATTCAGGAAATTAAAAGTATTAGGGAAATAAATGCTAACTTTGAAAAGAGTGCGAGACTCAATGAGAAAA---T---GATAACAAAAACAATGTCCCAGTGTTGACAACAGCTTAATGACCTCAAAGCTGTCAATACAAGGCTGAATTCAAAATTGGAGAAGGAAAAACACCGCACAGACAGACTGGAAGCTGAAGTTGAATTCCTCCATTCTAGACTGGCTGCTGCTATAAATGAGCACAATGCAAGT---GTAGAAACAAAAGACCTAGAACTCGTTTTACAGAGAGCATGTAAT------TTTTCTGTACATAAAAAAAAAAATGAGTTCTACTATTTCTCAACTAAAAGATAAACATGAGTTGCTTA------------CTAAAGCTGGGATGAAGTTAAATACCTTAAAAGGTAAGCTCCATGAGACAAGAGATGCTCTCAGGGAAAAGACACTGGCTTTAGAAAGTGTGCAGATGG i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46484050 570 - 47448759 AGAAGGATGTCATGTATGAAAATTGCATGTTGAAGAGGGATACTGCCGTACTCAGGCAGAAATTATACACAATAAAAAATGCCAGTCTCAGAAAGGAAAAGGAACATATTCTGGAAATTAAAAGTACTCGAGAAATAAATGCTAACTTTCAAAAGAGTGTAAGACTCAATGAGGAAA---T---GATAACAAAAACAATATCACAGTATTGTCAACAGCTTAATGAATTCAAAGCTAAGAATACAAGGCTGAATTCAGAACTGGAGAAGGTAAAACACAACAAGGACAGAGTGGAAGCTGAAATTGCATTCCTCCGTTCCATCCTGGCTGCTGCTGTAAATGGGCACAATGAAAGG---GTGAAAACAAAATACCTACAAGTTGCTTTACAGAGAGCACAAGAT------GTTTCTGTACGA----GAAATAATGACTTCTAATATTTCTCAACTGAAAGATAAGAATGAGTTGCTTACGGAACAACTTTCTAACGCTCAGATGAAGTTCCATATGTTAAAAGAGAAGCTCCATGAGACAAGAGATGCTCTCAGGGAAAAGACATCGGCTTTAGAAAGTGCAGAGAGGG i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 28536 570 + 8899380 AGAAGGATGTGAAGTCTGAAAACTGCATGTTGAAGAAAGATATTGCCATACTCAGACAAAAAGTATATGCAATGAAAAATGACAGTCTCCAAAAGGAAAAGGAATATATTCAGGAAATTATAAGTATTAAAGAAACAAATACTAACTTTCAAAAGAGCGTAGGACTCAATGAGGAAA---T---GATAACAAAAACAATGTCCCAGTATTGTCAACAGCTTAATGATCTCCAAGCTGAGAATACAAGGCTGAATTCAAAACTGGAGAAGGAAAAACACAGCAAGAAAAGACTGGAAGCTGAAGTTGATTCCCTCTATTCTAGACTGGCTGTTGTTGTAAATGAGCACAAAGAAAGT---ATGCAAACAAAGGACCTAGAACTTACTTTACAAAGAGCAAAAGAT------ATTTGTTTACAA----GAAATAACAAGTTCTAATATTTCTCAACTAAAGGATAAGAACAAGTTGCTTACTGTGCTACTTTCTAAAGCTCGAATGAAGTTTAATACCTTAAAAGGTAAGCTCCACAAGACAAGAGATGCTCTCAGGGAAAAGACGTTGGCTTTAGAAAGTGTAGAGATGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4419103 559 + 4432243 AGAAGGATGTGAAGTATGAAAATTGCATGTTGAAGAAAGATATTGCCATACTCAGACAAGAAGTATATGCAATAAAAAATGATAGTCTCAAAAAGGAGAAGGAACATATTCAGGAAATTAAAAGTATTAGAGAAATAAATGCTAACTTTCAAAAGAGTGTAATACTCAATGAGGAAA---T---AATAACAAAAACAATGTCCCAGTATTGTCAACAGCTTAGTGATCTCAAAGCTGAGAATACAAGGCTGTATTCAAAATTGGAGAAGAAAAAACACAACAAGGAAAGACTGGAAGCTGAAGTTGAATCCCTCCATTCTAGACTGGCTGCTCCTATAAATGAGCACAGTCAAAGC---ATGGAAACAAAAGACCTACAACTTACTTTACAGACAGCACAA----------TTTATTTAAAA----GAAA----AAGTTCTTATATTTCT-AACTAAAAGATAAGAATGAGTTG--TACTGTACTACTTTCTAAAGCTCAAATGAAGTTTAATACCTTCAAAGGTAAGCTTCACAAGACAAGAGATGCTCTCAGGGAAAAGATACTGGCTTTAGAAAGTGTAGAGGTGG i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19672059 579 - 27850971 AAGACGACCCATTGCATAAAAATCACATGTTGCAGGATGAAATTGCCATGCTAAGACTGGAAATAGACACGATAAAAATTCAGAACCAGGAAAAGGAAAAGAAATATTTTGAGGACATTGAAATTGTGAAAGAAAAGAATGATGACCTTCAAAGGACTATAAAACTGAATGAGGAAA---C---ATTAACAAAAACAATATCCCAGCATAATGGACAGCTCAGTGTTCTGACAGCTGAGAATACAATGCTAAATTCTAAATTGGAGAATGAAAAACAGATTAAGGAAAGACTGGAAGCAGAAGTTGAATCATACCGCTCTAGACTGGCTGCTGCTGTACATGATTGTGATCAAAGTCAGACATCAAAAAGAGACCTAGAACTTGCCTTCCAGAGAGCAAGAGATGAGTGGTTTCGATTACAA----GACAGAATGAATTTTGATTTGTCTAACCTAAAAGATAACAATGAGATTCTTTCTCAACAACTTTCTAAGACTGAAAGCAAATTCAATAGCCTAGAAATTGATCTCCATCACACAAGAGATGCTCTCAGAGAAAAGACTTTGGTTTTAGAACGTGTACAAAGAG i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79131815 579 - 85426708 CAAAAGATCTGTTACATAAAAACCGCATGTTGCAGGATGAAATTGCCATGCTAAGACTGGAAATAGACACAATAAGGAACCAGAATCAGGAAAAGGAAAAGAAATATTGTGAAGACATTGAAATTGAAAAAGAAAAGAATGACAGTCTTCAAAAGACCATAAAACTGAATGAGGTAA---C---ATTAACAAATACAGTATTCCAATATACTGGACAGCTCAATGTTCTGACAACTGAGAATACAATGCTACACTCTCAACTGGACAATGAAAAGCAAAACAAAGAAAGACTAGAAGCAAAAATTCAATCATACCGAGCTAGACTTGCTACTGCTATACAAGATCATGATCAAAGTCAGGCATCAAAAAGAGACCTAGAACTTGCTTTCCAGAGAGCAAAAGATGAGTGGTTTCGTTTACAG----GACAAAATGAACTTTGATGTGTCTAACCTAAAAGATAACAATGAGGTGCTTTCTCAGCAACTTTCTAAAGCTGAAAGTAAATTCAATACCCTAGAAATTGAGCTGCATCACACAAGAGATGCTCTCAGAGAAAAGACTTTGGCTTTAGAACATGTACAAAGAA i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1772285 579 - 2296528 GAAAAGATCTTTTGCATAAAAATCACATGTTGCAGGATGAAATTGCCATGTTAAAACTGGAAATAGACACAATAAAAAATCACAACCTGGAAAAAGAAAAGAAATATTCTGAGGACTTTGAGATTGTAAAAGAAAAAAATGTTGATCTTCAAAGAACATTAAAACTGAATGAGGAAA---C---ATTAACAAAAACAGTATTTCAATATAGTGGACAGGTGAATGTTCTGACATCAGAGAATGCAGTGCTAAACTCTAAATTAGAAAGTGAAAAACAAAACAAGGAAAGACTGGAAACAGAAGTTGAATCATACCGTTCCAGGCTGGCTGCTGCAATCAATGATCATGATCAATGTCAGACATCAAAAAGAGACTTAGACCTTGCTTTCCAGAGAGCAAGAGATGAGTGGTTTCGTATACAG----GACAAAATGAATTTTGATGTATCTAACCTCAAAGATAACAATGAGATTCTTTCTCAACAACTTTCTAAAACTGAAAGTAAATTCAATAACCTTGAAATTGAGCTCCATCACACAAGAGATGCTCTGAGAGAAAAGATTTTGACTTTAGAACGTGTACAAAGAG i dasNov3.JH570393 C 0 C 0 e macFas5.chr15 1455952 3 - 112612857 I a score=660624.000000 s hg38.chr3_KI270784v1_alt 173182 63 + 184404 ACCAAAGGCAAGCACAGCATCGAATAAAGGAAATGGAGCAGATTCATCC-AAATGAGGAAACTA s panTro5.chr3 66062 63 - 202621043 ACCAAAGGCAAGCACAGCATCGAATAAAGGAAATGGAGCAGATTCATCC-AAATGAGGAAGCTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 60989 63 - 205426864 ACCAAAGGCAAGCACAGCATCGAATAAAGGAAATGGAGCAGATTCATCC-AAATGAGGAAGCTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 79472 63 + 508821 ACCAAAGGCAAGCACAGCATCGAATAAAGGAAATGGAGCAGATTCATCC-AAACGAGGAAGCTA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 216569 63 - 123690457 ACCAAAGGCAAGCACAGCATCGAATAAAGGAAATGGAGCAGATTCATCC-AAATGAGGAAGCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 47995 63 - 85730 ACCAGAGGCAAGCACAGCATCGAATAAAGGAAATGGAGCAGGTGCATCC-AAATGAGGAAGCTA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1455955 63 - 112612857 ATCTAAAGCAAGCACAGCATCAAATAAAGGAAATGAAGCAGATGCATCC-AAGTGAGGAAGCTA i macFas5.chr15 I 3 C 0 s macNem1.NW_012020287v1 61630 63 + 4899514 ACCAGAGGCAAGCACAGCATCGAATAAAGGAAATGGAGCAGGTGCATCC-AAATGAGGAAGCTA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 60911 63 + 97742 ACCAGAGGCAAGCACAGCATCGAATAAAGGAAATGGAGCAGGTGCATCC-AAATGAGGAAGCTA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3711351 63 - 108555830 ACCTAAAGCAAACGCAGTATCGATTAAAGGAAATGAAGCAGATGCATCC-AAATGAGGAAGCTA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 61002 63 + 85016 ACCAGAGGCAAGCACAGCATCGAATAAAGGAAATGGAGCAGGTGCATCC-AAATGAGGAAGCTA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1039729 63 - 1267912 ACCAGAGGCAAGCACAGCATTGAATAAAGGAAATGGAGCAGGTGCATCC-AAATGAGGAAGCTA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46484620 63 - 47448759 ACCTAAGGCAAAAGCGGCATCGAATAAAGGAAATGGAGCAGATGCGTCT-AAATGAGGAAGCTA i calJac3.chr18 C 0 I 1 s saiBol1.JH378197 29106 63 + 8899380 ACCGAAGGGAAGCACAGCATCGAATAAAGGAAATGAAACAGATGCATCC-AAATAAAGAAGCTA i saiBol1.JH378197 C 0 I 1 s cebCap1.NW_016107581v1 4419662 64 + 4432243 ACCTAACACAAGCGCAGCATTGAATAAAGGAAATGAAGGAGATGCATCCAAAAAGAGGAAGCTA i cebCap1.NW_016107581v1 C 0 I 9 s otoGar3.GL873538 19672638 63 - 27850971 ACCTTAGCCAAACCCAGAGTCAAATGAAGGAAATTGAACAGATGTATCA-AGAAGAACAAGGTA i otoGar3.GL873538 C 0 I 1 s canFam3.chr2 79132394 63 - 85426708 ACCTAAAACAAACCCAGTGTCAGAAGAAGGAAATTGAACAGAAGTATCA-AAATGAGCAAAGTA i canFam3.chr2 C 0 I 1 s dasNov3.JH570393 1772864 63 - 2296528 ACCTAAGCCACACACAGTGTCAAATGAAGGAAATCGAACACATGTATCA-AAATGAACAAGGTA i dasNov3.JH570393 C 0 C 0 a score=51224.000000 s hg38.chr3_KI270784v1_alt 173245 10 + 184404 -AA-GGAGTCGA s panTro5.chr3 66125 10 - 202621043 -AA-GGAGTCGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 61052 10 - 205426864 -AA-GGAGTCGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 79535 10 + 508821 -AA-GGAGTCGA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 216632 10 - 123690457 -AA-GGAGTCGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 48058 10 - 85730 -AA-CGAGTCAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1456018 11 - 112612857 -AAGAGAGCCAT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 61693 10 + 4899514 -AA-CGAGTCAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 60974 10 + 97742 -AA-CGAGTCAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3711414 11 - 108555830 -AAGAAAGTCAA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 61065 10 + 85016 -AA-CGAGTCAA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1039792 10 - 1267912 -AA-CTAGTCAA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46484684 10 - 47448759 -AG-AGAGTCAG i calJac3.chr18 I 1 C 0 s saiBol1.JH378197 29170 10 + 8899380 -AA-AGAACCAA i saiBol1.JH378197 I 1 C 0 s otoGar3.GL873538 19672702 10 - 27850971 -AG-TGAATAAA i otoGar3.GL873538 I 1 C 0 s canFam3.chr2 79132458 10 - 85426708 -AG-TGAATAAA i canFam3.chr2 I 1 C 0 s dasNov3.JH570393 1772927 11 - 2296528 AAG-TGAATAAA i dasNov3.JH570393 C 0 C 0 e cebCap1.NW_016107581v1 4419726 9 + 4432243 I a score=3006854.000000 s hg38.chr3_KI270784v1_alt 173255 309 + 184404 TCCACCGGAAAGCACAACTGTGTAGAGGAGAGACTATGTCAACTAGAATGTGACAGTCTCTTGCTTCAACGACAACTAGAGGGTGCTCATAAGGAAGGCAATGAT----AAAG---AGATAGTAATTAATATCCAAGG--------AGGCTGTC----------------TTGAGAGTGGAAAGA-------TCTTCTA---GAAGAGAAAAATAAGAAACTAATGAATGAATATAATTCTATAAAAGAAAAACTGTTTCAGTATGTAAAAGA------AGAAGGAGAAGTAAGTATGAAGAAAGATAAATA-TATTT-AACCTTCCAGAAAGAAAATTTA----AACATTTCATTGTGGCT s panTro5.chr3 66135 315 - 202621043 TCCACCAGAAAGCACAACTGTGTAGAGGGGAGACTATGTCAACTAGAATGTGAAAGTCTCTTGCTTCAACGACAACTAGAGGGTGCTCATAAGGAAGGCAATGAT----AAAG---AGATAGTAATTAATATCCAAGG--------AGGCTGTC----------------TTGAGAGTGGAAAGA-------TCTTGTA---GAAGAGAAAAATAAGAAACTAATGAATGAATATAATTCTATAAAAGAAAAACTGTTTCAGTATGTAAAAGAAGAAGGAGAAGGAGAAGTAAGTATGAAGAAAGATAAATA-TATTT-AACCTTCCAGAAAGAAGATTTA----AACATTTCATTGTGGCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 61062 315 - 205426864 TCCACCAGAAAGCACAACTGTGTAGAGGAGAGACTATGTCAACTAGAATGTGAAAGTCTCTTGCTTCAACGACAACTAGAGGGTGCTCATAAGGAAGGCAATGAT----AAAG---AGATAGTAATTAATATCCAAGG--------AGGCTGTC----------------TTGAGAGTGGAAAGA-------TCTTCTA---GAAGAGAAAAATAAGAAACTAATGAATGAATATAATTCTATAAAAGAAAAACTGTTTCAGTATGTAAAAGAAGAAGGAGAAGGAGAAGTAAGTATGAAGAAAGATAAATA-TATTT-AACCTTCCAGAAAGAAGATTTA----AACATTTCATTGTGGCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 79545 319 + 508821 TCCACCGGAAAGCACAACTGTGTAGAGGAGAGACTATGTCAACTAGAATGTGAAAGTCTCTTGCTTAAACGACAACTAGAGGGTGCTCATAAGGAAGGCAATGATAAAGAAAG---AGATAGTAATTAATATCCAAGG--------AGGCTGTC----------------TTGAGAATGGAAAGA-------TCTTCTA---GAAGAGAAAAATAAGAAACTAATGAATGAATATAATTCTATAAAAGAAAAACTGTTTCAGTATGTAAAAGAAGAAGGAGAAGGAGAAGTAAGTATGAAGAAAGATAAATA-TATTT-AACCTTCCAGAAAGAAAATTTA----AACATTTCATTGTGGCT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 216642 313 - 123690457 TCCACCAGTGAGCACAACTGTGTATAGGAGAGACTATGTCAACTAGAATGTGAAAATCTCTTGCTTAAACGACAACTAGAGGGTGCTCATAAGGAAGGCAATGAT----AAAG---AGATAGTAATTAATATCCAAGG--------AGGCTGTC----------------TTGAG--TGGAAAGA-------TCTTCTA---GAAGAGAAAAATAAGAAACTAATGAATGAACATAGTTCTATAAAAGAAAAACTGTTTCAGTATGTAAAAGAAGAAGGAGAAGGAGAAGTAAGTATGAAGAAAGATAAATA-TTTTT-AACCTTCCAGAAAGAAAATTTA----AACATTTCATTGTGGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 48068 318 - 85730 TCCACCGGAAAGCACAACTGTGTAGCGGAGAGACTGTGTCAACTAGAATGTGAAACTCTCTTGCTTAAACGACAACTAGAGGGTGCTCATAAGGAAGGCAATGAT----AAAG---AGATAGTAATTAATATCCAAGG--------AGGCTGTC----------------TTGAGAGTGGAAAGAAAGA---TCTTCTA---GAAGAGAAAAATAAGAAATTAATGAATGAATATAATTCTATAAAAGAAAAACTGTTTCAGTATGTAAAAGAAGAAGCAG-AGGAGAAGTAAGTATGAAGAAAGATAAATA-TTTTT-AACCTTCCAGAAAGAAAATTTA----AACATTTCATTGTGGCT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1456029 315 - 112612857 TCCATTGGAAAGCAGAACTCTTTAGAGGAGAGAATACGTCAACAAGAACTTGAAAATCTCTTGCTTGAACAACAACTAAAGGATGCTTATAAGGAAGGCAATAAT----GAAG---AGGCAGTCATTAATATCCAAGA--------AGACTCTC----------------TTGATAATGGAAAGGAAGATCTTCTTCTA---GAAGAAAAAAATAAGGAATTAATGAATGAATATAATTATTTGAAAGAAAAACTGTTTCAGTATGAGAAAGAAGCAGCAG-A--AGAAGTAAGTATGAAAAA----AACTA-TGTTT-AACCTTCTGGAAAGAAAATTTA----AACATTTCATTCTGGCT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 61703 318 + 4899514 TCCACTGGAAAGCACAACTGTGTAGAGGAGAGACTGTGTCAACTAGAATGTGAAAATCTCCTGCTTAAACAACAACTAGAGGGTGCTCATAAGGAAGGCAATGAT----AAAG---AGATAGTAATTAATATCCAAGG--------AGGCTGTT----------------TTGAGAGTGGAAAGAAAGA---TCTTCTA---GAAGATAAAAATAAGAAATTAATGAATGAATATAATTCTATAAAAGAAAAACTGTTTCAGTATGTAAAAGAAGAAGCAG-AGGAGAAGTAAGTATAAAGAAAGATAAATA-TTTTT-AACCTTCCAGAAAGAAAATTTA----AACATTTCATTGTGGCT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 60984 316 + 97742 TCCACCGGAAAGCACAACTGTGTAGAGGAGAGACTGTGTCAACTAGAATGTGAAAATCTCTTGCTTAAACGACAACTAGAGGGTGCTCATAAGGAAGGCAATGAT----AAAG---AGATAGTAATTAATATCCAAGG--------AGGCTGTC----------------TTGAGAGTGGAAAGAAAGA---TCTTCTA---GAAGAGAAAAATAAGAAATTAATGAATGAATATAATTCTATAAAAGAAAAAC--TTTCAGTATGTAAAAGAAGAAGCAG-AGGAGAAGTAAGTATGAAGAAAGATAAATA-TTTTT-AACCTTCCAGAAAGAAAATTTA----AACATTTCATTGTGGCT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3711425 315 - 108555830 TCCTTTGGAAAGCAGAACTCTTTAGAGGAGAGAAGACATCAACAAGAACCTGAAAATCTATTGCTTGAACAACAACTAAAGGATGCTTATAAGGAAGGCAATAAT----AAAG---AGATAGTCATTAATATCCAAGA--------AGACCGTC----------------TTGAGAATGGAAAGGAAGA---TCTTACA---GAAGAAAAAAATACGGAATTAACGAATGAATATAATTATTTAAAAGAAAAACTGTTTCAGTATgaaaaagaagaagcagaaggagaagtaagtatgaagaa----AACTG-TTTTT-AACCTTCTGGAAAGAAAATTTA----AGCATTTCATTCTGGCT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 61075 316 + 85016 TCCACCGGAAAGCACAACTGTGTAGAGGAGAGACTGTGTCAACTAGAATGTGAAAATCTCTTGCTTAAACGACAACTAGAGGGTGCTCATAAGGAAGGCAATGAT----AAAG---AGATAGTAATTAATATCCAAGG--------AGGCTATC----------------TTGAGAGTGGAAAGAAAGA---TCTTCTA---GAAGAGAAAAATAAGAAATTAATGAATGAATATAATTCTATAAAAGAAAAAC--TTTCAGTATGTAAAAGAAGAAGCAG-AGGAGAAGTAAGTATGAAGAAAGATAAATA-TTTTT-AACCTTCCAGAAAGAAAATTTA----AACATTTCATTGTGGCT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1039802 314 - 1267912 TCCACCAGAAAGCACAACTGTGTAGAGGAGAGACTGTGTCAACTAGAATGTGAAAATCTCTTGCTTAAACAACAACTACAGGGTGCTCATAAGGAAGGCAATGAT----AAAG---AGATAGTAATTAATATCCAAGG--------AGGCTGTC----------------TTGAGAGTGGAAAGAAAGATCTTCTTCTA---GAAGAGAAAAATAAGAAATTAATGAATGAATATAATTCTACAAAAGAAAAGCTGTTTCAGTATGTAAAAGAAGAAGCAG-AG-------AAGTATGAAGAAAGATAAATA-TTTTT-AACCTTCCAGAAAGAAAATTTA----AACATTTCATTGTGCCT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46484694 320 - 47448759 TTCATTGGAAAGCAGAACTGTGTAGAGGAGAGAATACATCAAGTAGAATGTGAAAATCTCTTGCTTGAACAACTACTAGAGGCTGCTTGTAAGGAAGGCAATAAT----GAAA---ATATAGTAATTAATACCCAAGG--------AGGCTGGG----------------ATGAGTGTGTAAAGGAAGG---TCTTCTTCTAGAAGAGaaaaataaagaattaattaatgaatataattatttaaaaGAAAAACTGTTTCAGTATGAAAAAGAAGAAGCAGAAATAAAAGTAAGTATGAAGAAAG--AAATA-TTTTT-AACCTTCCAGAAAGAAAATGTA----AACTTTTCATTTTGGCT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 29180 312 + 8899380 TTCATGCTAAAGCAGAACTGT---GAAGAGAGAATATGTCAACTAGAACGTGAAAATCTCTTGCTTGAACGACAACTAGAGGTTGCTCATAAGGATGGCAGTAAT----AAAG---AGATAGTAATTAATATCGAAGG--------AGGCTGTC----------------TTGAGAGTGGAAAGGAAGA---TTTTCTT---GAAGAGAAAAATAAGGAATTAATGAATGAATATAATTATTTAAAAGAAAAACTGTTTCAGTATGAAAAAGAAGAAGCAGA---AGAAGTAAGTATGAAAAAAGATAAATA-TTTTT-AGTCTTCTGGAAA-AAAATTTA----AACATTTCATTCTGGCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4419735 313 + 4432243 TCAATCAGAAAGCAGAACTGTCAAGAGAAGAGAATATGTCAACTAGAACATGAAAATCTCTTGCTTTAATGACAACTAGAGGGTGCTGATAAGGAAAGCAATAAT----AAAG---AGATAGTAATTAATATCCAAGG--------AGGCTGTC----------------TTGAGAGTGGACAGGAAGA---TTTTCTA---GAAGAGAAAAATAAGGAATTAATGAATGAATATAATTATTTAAAAGAATAACTTTTTCAGAATGAAAAAGAAGAAGG------AAAAGTAAGTATGAAGAAAGATAAATA-TTTTT-AACCTTCTGGAAAGAAAATTTA----AACATTTTATTCTGGCT i cebCap1.NW_016107581v1 I 9 C 0 s otoGar3.GL873538 19672712 342 - 27850971 TACATTGGAAAACAGGAATCTGTAGAGGAGAGATTATCTCAACTACAAAGTGAAAATATGTTGCTTCGACAGCAACTGGATGATGCTCAGAACAAAGCTGATAGT----AAAGAAAAGACAGTAATTAATATCCAGGACCAATTTCATGCTATAGTGGAAAAACTTCAAGCTGAAAGTGAAAAGCAAAGTATTCTGCTA---GAAGAAAGAAATAAAGAATTAATCAGTGAATGCAATCATTTAAAAGAAAGACAGTATCAATACGAAAATGAGAAAGCAGAAAGAGAAGTAAGTATCAAGGAAGAGAAATAGTTTTC-AAACTTCCTGAAAGAAAAAATG------------GTTATGAAT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79132468 354 - 85426708 TACTTTGGAAAGCAGGGATCCTTAGAAGAGAGATTATCTCAACTACAAAGTGAAAATATGTTGCTCCGACAGCAAATAGATGATGCCTACAGCAAAGTTGACTGT----AAAGAAAAGACTGTAATTGATATCCAAGACCAGTTTCAGGTTATTGTAAGAAATCTTCAAGCTGAAAGTGAAAAACAAAGTGTTATACTG---CAAGAAAGAAATAAGGAGTTAATCACTGAATGTAACCATTTAAAAGAAAGAATATATAAGTATGAGAAGGAGAAAGAAGAAAGGGAAGTAAGTATTCAGAAAGACAAATA-TTTTTCAAGCTTCCTGAGAGAAAATTCAAAGTAATGCTTGATTATGGct i canFam3.chr2 C 0 I 185 s dasNov3.JH570393 1772938 350 - 2296528 TACATTGGAAAACAGGAATCCTTAGAGGAAAGGTTATCCCAACTACAGAGTGAAAATATGTTACTTCGGCAACAACTGGATGATGCTCACAACAAAGCTGACAAT----AAAGAAAAGACAGTAATTAATATTCAAGACCAATTTCAGGATATAATAAAAAATCTTAAAGCCGAAAGTGAAAAACAAAGTCTTCTGCTG---GAAGAGAGAAATAAGGAGTTAATCAATGAATGTAATCATTTAAAGGACCGACTGTATCAGTATGAAAATGAGAAAGCAGAAAGAGAAGTAAGTATCAAGAAATATAAA---CCTTT-AA-CTTCCTGAGAGAAAATACAGAGTAATATTTGGTTATGACT i dasNov3.JH570393 C 0 C 0 a score=375895.000000 s hg38.chr3_KI270784v1_alt 173564 42 + 184404 ATATGTTGAATCTAGTTCAATAT--AATAATAAATAGATGA-AAA s panTro5.chr3 66450 42 - 202621043 ATATGTTGAATCTAGTTCAATAT--AATAATAAATAGATGA-AAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 61377 42 - 205426864 ATATGTTGAATCTAGTTCAATAT--AATAATAAATAGATGA-AAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 79864 42 + 508821 GTATGTTGAATCTAGTTCAATAT--AATAATAAATAGATGA-AAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 216955 42 - 123690457 ATATGTTGAATCTAGTTCAATAT--AAAAATAAATAGATGA-AAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 48386 42 - 85730 ATATGTTGAATCTAATTCTATAT--AAAAATAAATAGATGA-AAG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1456344 42 - 112612857 ATATGTTTAACCTAGTTAAATAT--AAAAATAAATAGATGA-AAA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 62021 42 + 4899514 ATATGTTGAATCTAATTCAATAT--AAAAATAAATAGATGA-AAG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 61300 42 + 97742 GTATGTTGAATCTAATTCAATAT--AAAAATAAATAGATGA-AAG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3711740 42 - 108555830 GTATGTTGAACCTAGTTCAATAT--AAAAATAAATAGATGA-AAA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 61391 42 + 85016 GTATGTTGAATCTAATTCAATAT--AAAAATAAATAGATGA-AAG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1040116 42 - 1267912 ATATGTTGAATCTAGTTCAATAT--AAAAATAGATAGATGA-AAA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46485014 44 - 47448759 ATATGTTGAACCTAGTTCAATATTAAAAAGTAAATAGATGG-AAG i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 29492 42 + 8899380 ATATGTTGAACCTAGTTCAATAT--AAAAATGAATAGATAA-AAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4420048 42 + 4432243 ATATGTTGAACCAAGTTCAATAT--AAAAATAAATAGATGA-AAA i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19673054 42 - 27850971 AAATGTTGAGTC-AGTGGAATAT--AAAAATAAATAGATGATAAA i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1773288 28 - 2296528 AAATGTTAAGCCTAGCTGAAAAT--GAAAA--------------- i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79132822 185 - 85426708 I a score=81153.000000 s hg38.chr3_KI270784v1_alt 173606 9 + 184404 TGTATTTAC s panTro5.chr3 66492 9 - 202621043 TGTATTTAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 61419 9 - 205426864 TGTATTTAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 79906 9 + 508821 TGTATTTAC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 216997 9 - 123690457 TGTATCTAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 48428 9 - 85730 TGTATTTAT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1456386 9 - 112612857 TGTGTTTAC i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 62063 9 + 4899514 TGTATTTAT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 61342 9 + 97742 TGTATTTAT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3711782 9 - 108555830 TGTGTTTAC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 61433 9 + 85016 TGTATTTAT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1040158 9 - 1267912 TGTATTTAC i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46485058 9 - 47448759 TGTGTTTAT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 29534 9 + 8899380 TGTGTTTAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4420090 9 + 4432243 TATGTTTAC i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19673096 9 - 27850971 TGTATCTAC i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79132822 185 - 85426708 I e dasNov3.JH570393 1773316 0 - 2296528 C a score=1407804.000000 s hg38.chr3_KI270784v1_alt 173615 177 + 184404 catactgtataattccattaacatgaaacatccagaaaagacatgtatagggacagaaagaagatgaatgtttctgtagggctggggctggaaatgggtcgtgactgct-gatgggcatgagggatcatcctggagtgatgaaaatgttctaaagctggattgtaaagatgactgcac s panTro5.chr3 66501 177 - 202621043 catactgtataattccattaacatgaaacatccagaaaagacatgtatagggacagaaagaagatgaatgtttctgtagggctggggctggaaatgggtcgtgactgct-gatgggcatgagggatcatcctggagtgatgaagatgttctaaagctggattgtaaagatgactgcac i panTro5.chr3 C 0 C 0 s panPan2.chr3 61428 177 - 205426864 catactgtataattccattaacatgaaacatccagaaaagacatgtatagggacagaaagaagatgaatgtttctgtagggctggggctggaaatgggtcgtgactgct-gatgggcatgagggatcatcctggagtgatgaaaatgttctaaagctggattgtaaagatgactgcac i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 79915 177 + 508821 catactgtataattccattaacatgaaacatccagaaaagacatgtatagggacagaaagaggatgaatgtttctgtagggctggggctggaaatgggtcgtgactgct-gatgggcatgagggatcatcctggagtgatgaaaatgttctaaagctggattgtaaagatgactgcac i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 217006 177 - 123690457 catactgtataattccattaacatgaggcatccagaaaagacatgtacagggacagaaagaagatgaatgtttctgtagggctggggctggaaatgggtcgtgactgct-gatgggcatgagggattgtcctggagtgacgaaaatgctctcaagctggattgtaaagatgactgcac i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 48437 176 - 85730 catactgtataattccgttt-catgaaacatccagaaaagacatatatagggacagaaagaagatgaatgtttgtgcagggctggggctggaaatgggtcgtgactgct-gatgggcatgagggattgtcctggagtgatgaaaatgttctaaagctggattgtagggatggttgtac i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1456395 177 - 112612857 Tatactgtataattccatttgtattaatcatccaggaaatacatgtataggaacagaaagaagattaatgtttgtgtaggcctggggctggaaatgggtggtgactgct-aatgggcatgagggattgtcctgcagtgatgaaaatgttctaaagttgaattgtagagatggttgcac i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 62072 176 + 4899514 catactgtataattccgttt-catgaaacatccagaaaagacatatatagggacagaaagaagatgaatgtttgtgtagggctggggctggaaatgggtcgtgactgct-gatgggcatgagggattgtcctggagtgatgaaaatgttctaaagctggattgtagggatggttgtac i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 61351 172 + 97742 catactgtataattccgttt-catgaaacatccagaaaagacatatatagggacagaaagaagatgaa----tgtgtagggctggggctggaaatgggtcgtgactgct-catgggcatgagggattgtcctggagtgatgaaaatgttctaaagctggattgtagggatagttgcac i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3711791 177 - 108555830 catactgtataattccatttacatgaatcatccaggaaatacatgtataggaacagaaagaagattaatgtttgtgtagagctggggctggaaatgggtgttgactgct-aatgggcatgagggattgtcctggaatgatgaaaatgttctaaagttggattgtagagatggttgcat i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 61442 172 + 85016 catactgtagaattccgttt-catgaaacatccagaaaagacatatatagggacagaaagaagatgaa----tgtgtagggctggggctggaaatgggtcgtgactgct-catgggcatgagggattgtcctggagtgatgaaaatgttctaaagctggattgtagggatagttgcat i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1040167 176 - 1267912 catactgtataattccattt-tgtgaaacatccagaaaagacatatatagggacagaaagaagatgaatgtttgtgtagggctggcactggaaatgggtcgtgactgct-gatgggcatgagggtttgtcctggagtgatgaaaatgttctaaagctggattatagggatggttgcac i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46485067 177 - 47448759 catgctgtataattccagttatatgaaacatccagaaaagacatgtataggaacagaaagtagattaatgtttgtgtaggagtagcactggaaatgggtagtgactgctaaatgggcatgagggattgtcctggactgatg-aaatgttctaaagttggattgtagagatggttccac i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 29543 177 + 8899380 catactgtataattctatttacatgaaacatctagaaaataaatgtatagggacagaaagtagattaatgtttttgtagggctgaagctggaaatgggtagtgactgct-aatgggcatgagagattgtcttggagtgatgaaaatgttcaaaagttggattgtagagatggttgtac i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4420099 162 + 4432243 catactgtataattccatctacatgaaacatccagaaaagacaggtttagagacagaaagaagattaatg---------------ggctggaaatggatagtgactgct-aatgggcatgagggattatcctggagtgatgaaaatgttcaaaagttggattttagagatggttgcac i cebCap1.NW_016107581v1 C 0 I 106 e canFam3.chr2 79132822 185 - 85426708 I e dasNov3.JH570393 1773316 0 - 2296528 C e otoGar3.GL873538 19673105 0 - 27850971 C a score=71481.000000 s hg38.chr3_KI270784v1_alt 173792 15 + 184404 -gac-tggtaaattt--------------------ac s panTro5.chr3 66678 15 - 202621043 -gac-tggtaaattt--------------------ac i panTro5.chr3 C 0 C 0 s panPan2.chr3 61605 15 - 205426864 -gac-tggtaaattt--------------------ac i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 80092 15 + 508821 -gac-tggtaaattt--------------------ac i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 217183 15 - 123690457 -gac-tggtaaattt--------------------ac i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 48613 15 - 85730 -gac-tagtaaattt--------------------ac i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1456572 16 - 112612857 -gacacagtaaagtt--------------------ac i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 62248 15 + 4899514 -gac-tagtaaattt--------------------ac i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 61523 15 + 97742 -gac-tagtaaattt--------------------ac i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3711968 16 - 108555830 -gatacagtaaattt--------------------ac i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 61614 15 + 85016 -gac-tagtaaattt--------------------ac i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1040343 15 - 1267912 -tac-tagtaaattt--------------------ac i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46485244 16 - 47448759 cact-cagtaaattt--------------------ac i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 29720 36 + 8899380 aagt-cagtgaatttgttaaaGTACGTATGTTAGAGT i saiBol1.JH378197 C 0 C 0 e canFam3.chr2 79132822 185 - 85426708 I e dasNov3.JH570393 1773316 0 - 2296528 C e otoGar3.GL873538 19673105 0 - 27850971 C e cebCap1.NW_016107581v1 4420261 106 + 4432243 I a score=242170.000000 s hg38.chr3_KI270784v1_alt 173807 42 + 184404 taaaaatctttg--------------------------------------------------------------------------------------------aactgtatgttaaa----acagataaattctgta s panTro5.chr3 66693 42 - 202621043 taaaaatctttg--------------------------------------------------------------------------------------------aactgtatgttaaa----acagataaattctgta i panTro5.chr3 C 0 C 0 s panPan2.chr3 61620 42 - 205426864 taaaaatctttg--------------------------------------------------------------------------------------------aattgtatgttaaa----acagataaattctgta i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 80107 42 + 508821 taaaaatctttg--------------------------------------------------------------------------------------------aactgtatgttaaa----acagataaattctgta i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 217198 42 - 123690457 taaaaatctttg--------------------------------------------------------------------------------------------aactgtatgttgaa----acagataaattctgta i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 48628 41 - 85730 taaaaatctttg--------------------------------------------------------------------------------------------aactgtatgttaaa----acagataaa-tatgta i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1456588 36 - 112612857 taaaaatctttg--------------------------------------------------------------------------------------------aactgcttgttaaa----atagataaa-t----- i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 62263 45 + 4899514 taaaaatctttg--------------------------------------------------------------------------------------------aactgtatgttaaaacatacagataaa-tatgta i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 61538 41 + 97742 taaaaatctttg--------------------------------------------------------------------------------------------aactgtatgttaaa----acagataaa-tatgta i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3711984 42 - 108555830 taaaaatctttg--------------------------------------------------------------------------------------------aactgtttgttaaa----acagataaattctata i chlSab2.chr12 C 0 I 30 s manLeu1.NW_012101680v1 61629 41 + 85016 taaaaatctttg--------------------------------------------------------------------------------------------aactgtatgttaaa----acagataca-tatgta i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1040358 41 - 1267912 taaaaatatttg--------------------------------------------------------------------------------------------aactgtatgttaaa----acagataaa-tatgta i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46485260 42 - 47448759 taaacatctttg--------------------------------------------------------------------------------------------aactgtatgtgaaa----acagataaattttata i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 29756 132 + 8899380 TAAACATGTATGTTAGAGTTAAGCATGTAATAATATTTAAATATTCTTAAATCTACTTAGAGCTAAATATTATTCCATGTTGTGGAATAAATGTGTTAAAAATCAACTATATGTGAAA----AC--ATAAATTTTATA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4420367 42 + 4432243 TAAAAATCTTTT--------------------------------------------------------------------------------------------AACTCTATGTTAAA----GCAAATAAATTCTATA i cebCap1.NW_016107581v1 I 106 C 0 e canFam3.chr2 79132822 185 - 85426708 I e dasNov3.JH570393 1773316 0 - 2296528 C e otoGar3.GL873538 19673105 0 - 27850971 C a score=36985.000000 s hg38.chr3_KI270784v1_alt 173849 5 + 184404 gtatg s panTro5.chr3 66735 5 - 202621043 gtatg i panTro5.chr3 C 0 C 0 s panPan2.chr3 61662 5 - 205426864 gtatg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 80149 5 + 508821 gtatg i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 217240 5 - 123690457 gtatg i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 48669 5 - 85730 gtatg i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1456624 4 - 112612857 -tcta i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 62308 5 + 4899514 gtatg i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 61579 5 + 97742 gtatg i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 61670 5 + 85016 gtatg i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1040399 5 - 1267912 gtatg i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46485302 5 - 47448759 gtatg i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 29888 5 + 8899380 GTATG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4420409 5 + 4432243 GTATG i cebCap1.NW_016107581v1 C 0 C 0 e canFam3.chr2 79132822 185 - 85426708 I e dasNov3.JH570393 1773316 0 - 2296528 C e otoGar3.GL873538 19673105 0 - 27850971 C e chlSab2.chr12 3712026 30 - 108555830 I a score=-605.000000 s hg38.chr3_KI270784v1_alt 173854 1 + 184404 t s panTro5.chr3 66740 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 61667 1 - 205426864 t i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 80154 1 + 508821 t i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 217245 1 - 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 48674 1 - 85730 g i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1456628 1 - 112612857 t i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 62313 1 + 4899514 g i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 61584 1 + 97742 g i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 61675 1 + 85016 g i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1040404 1 - 1267912 g i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46485307 1 - 47448759 t i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 29893 1 + 8899380 T i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4420414 1 + 4432243 T i cebCap1.NW_016107581v1 C 0 C 0 s dasNov3.JH570393 1773316 1 - 2296528 T i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79132822 185 - 85426708 I e otoGar3.GL873538 19673105 0 - 27850971 C e chlSab2.chr12 3712026 30 - 108555830 I a score=236831.000000 s hg38.chr3_KI270784v1_alt 173855 34 + 184404 aaatcatattttagcaaagctgttttaat-aaaaa s panTro5.chr3 66741 33 - 202621043 aaatcatattttagcaaagctgttttaat--aaaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 61668 33 - 205426864 aaatcatattttagcaaagctgttttaat--aaaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 80155 33 + 508821 aaatcatattttagcaaagctgttttaat--aaaa i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 217246 33 - 123690457 aaatcatattttagcaaagctgttttaat--aaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 48675 33 - 85730 aaatcatattttaacaaagctgttTTAAT--AAAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1456629 33 - 112612857 aaatcatatttcaacaaaactgttTTAAT--AAAA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 62314 33 + 4899514 aaatcatattttaacaaagctgttTTAAT--AAAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 61585 33 + 97742 aaatcatattctaacaaagctgttTTAAT--AAAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3712056 33 - 108555830 AAATCATATTTCCACAAAGCTGTTTTAAT--ACAA i chlSab2.chr12 I 30 C 0 s manLeu1.NW_012101680v1 61676 33 + 85016 aaatcatattctaacaaagctgttTTAAT--AAAA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1040405 35 - 1267912 aaatcatattttaacaaagctgttTTAATAAAAAA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46485308 31 - 47448759 aaatcatatttcaacaaagccttttt--t--taaT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 29894 33 + 8899380 AAATCATGTATATACAAAGCTGTTTCAGT--AAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4420415 33 + 4432243 AAATCACATTTCAACAAAGCTGTTTTAAT--AAAA i cebCap1.NW_016107581v1 C 0 C 0 s dasNov3.JH570393 1773317 10 - 2296528 AGACTATATT------------------------- i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79132822 185 - 85426708 I e otoGar3.GL873538 19673105 0 - 27850971 C a score=79774.000000 s hg38.chr3_KI270784v1_alt 173889 20 + 184404 AACA---------------AAAAAAATATGTTTAC s panTro5.chr3 66774 20 - 202621043 aACC---------------AAAAAAATATGTTTAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 61701 19 - 205426864 aACC----------------AAAAAATATGTTTAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 80188 22 + 508821 aACC-------------AAAAAAAAATATGTTTAC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 217279 22 - 123690457 aACC-------------AAAAAAAAATGTGTTTAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 48708 20 - 85730 AACT---------------AAAAAAATGTGTTTAC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1456662 20 - 112612857 AACC---------------AAAAAAATGTGTTTAC i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 62347 20 + 4899514 AACT---------------AAAAAAAAGTGTTTAC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 61618 20 + 97742 AACT---------------AAAAAAATGTGTTTAC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3712089 23 - 108555830 AACC------------AAAAAAAAAATATGTTTGC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 61709 20 + 85016 AACT---------------AAAAAAATGTGTTTAC i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1040440 20 - 1267912 AAAC---------------AAAAAAATGTGTTTAC i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46485339 34 - 47448759 CAACCCTCCCCCCTGCCAAAAAAAAAC-TGTTTTC i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 29927 24 + 8899380 AAAA----------AGCAAAAAACAAT-ATTTTAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4420448 25 + 4432243 AACC----------AAAAAAACAAAATGTTTTTAC i cebCap1.NW_016107581v1 C 0 C 0 s canFam3.chr2 79133007 20 - 85426708 AGCA---------------TAAAAAATATAGAGAG i canFam3.chr2 I 185 C 0 s dasNov3.JH570393 1773327 9 - 2296528 --------------------------TGTATTTTC i dasNov3.JH570393 C 0 C 0 e otoGar3.GL873538 19673105 0 - 27850971 C a score=526763.000000 s hg38.chr3_KI270784v1_alt 173909 50 + 184404 TGTA--TCAGCTTGGAAACATA--------CCTTGTTTCCAGGAAATAAAAGGTAGAGCT s panTro5.chr3 66794 50 - 202621043 TGTA--TCAGCTTGGAAACATA--------CCTTGTTTCCAGGAAATAAAAGGTAGAGCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 61720 50 - 205426864 TGTA--TCAGCTTGGAAACATA--------CCTTGTTTCCAGGAAATAAAAGGTAGAGCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 80210 50 + 508821 TGTA--TCAGCTTGGAAACATA--------CCTTGTTTCCAGGAAATAAAAAGTAGAGCT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 217301 50 - 123690457 TGTA--TCAGCTTGGAAACATA--------CCTTGTTTCCAGGAAATAAAAGGTAGAGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 48728 50 - 85730 TGTA--TCAGCTTGGAAACATA--------CCTTGTTTCCAGGAAATAAAAGGTAGAGCT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1456682 58 - 112612857 TGTA--TCAGCTTGGAAACATACTTACATGCTTTGTTTCCAAAAAATAAAAAATAGAGCT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 62367 50 + 4899514 TGTA--TCAGCTTGGAAACATA--------CCTTGGTTCCAGGAAATAAAAGGTAGAGCT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 61638 50 + 97742 TGTA--TCAGCTTGGAAACATA--------CCTTGTTTCCAGGAAATAAAAGGTAGAGCT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3712112 50 - 108555830 TGTA--TCAGCTTGGAAACATA--------CTTTGTTTCCAGAAAATAAAAGGTAGAACT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 61729 50 + 85016 TGTA--TCAGCTTGGAAACATA--------CCTTGTTTCCAGGAAATAAAAGGTAGAGCT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1040460 50 - 1267912 TATA--TCAGCTTGGAAACATA--------CCTTGTTTCCAGGAAATAAAAGGTAGAGCT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46485373 50 - 47448759 TGTA--TTAGCTTGAAAACACA--------CTTTGTTTCCAGGAAATAAAAGGTAGAGCT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 29951 45 + 8899380 TGTA--TCAGCTTGGAAACATA--------CCTTATTTTCAAGAAATAAAAGGTA----- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4420473 50 + 4432243 TGTA--TCCCCTTGGAAACATA--------CCTTGTTTCCGGGAAATCAAAAGTACAGCT i cebCap1.NW_016107581v1 C 0 I 725 s otoGar3.GL873538 19673105 50 - 27850971 TGTA--TCAGCTTAGAAACATA--------CCTTGTTTCCACCAAATGAAAGTTAGGGCT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79133027 43 - 85426708 TGTAAGTCAGCGT-----------------ACTTGTATCCAGCAAATAAAAATTAGACCT i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1773336 50 - 2296528 TGTG--TCAGAATAGAAGCATA--------CTTTTTATCTATCAAATAAAAATCAGACCT i dasNov3.JH570393 C 0 C 0 a score=159615.000000 s hg38.chr3_KI270784v1_alt 173959 25 + 184404 GACAGATGCTT-TCCTTTGAGTAAAC s panTro5.chr3 66844 25 - 202621043 GACAGATACTT-TCCTTTGAGTAAAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 61770 25 - 205426864 GACAGATACTT-TCCTTTGAGTAAAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 80260 25 + 508821 GACAGATGCTT-TCCTTTGAGTAAAC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 217351 25 - 123690457 GACAGACGCTT-TCCTTTGAATAAAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 48778 24 - 85730 GACAGATGCTT-T-CTTTGAGTAAAG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1456740 25 - 112612857 GAGAGATGCTTAA-CTTTGAGTAAAG i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 62417 24 + 4899514 GACAGATGCTT-T-CTTTGAATAAAG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 61688 24 + 97742 GACAGATGCTT-T-CTTTGAGTAAAG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3712162 25 - 108555830 GACAGATGCTT-TCCTTTGAGTAAAG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 61779 24 + 85016 GACAGATGCTT-T-CTTTGAGTAAAG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1040510 24 - 1267912 GACAGATGCTT-T-CTTTGAGTAAAG i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46485423 25 - 47448759 GACAGATGCTT-TACTTTGAGTAAAG i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 29996 18 + 8899380 -------GCTT-TACTTTGAGTAAAG i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19673155 25 - 27850971 GAGAGTTGCTT-TACTTTGGGTAAAA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79133070 25 - 85426708 AAGAGGTGCTT-TAATTTGATTAAAA i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1773386 8 - 2296528 GAAAGGTG------------------ i dasNov3.JH570393 C 0 C 0 e cebCap1.NW_016107581v1 4420523 725 + 4432243 I a score=46712.000000 s hg38.chr3_KI270784v1_alt 173984 4 + 184404 ACAT s panTro5.chr3 66869 4 - 202621043 ACAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 61795 4 - 205426864 ACAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 80285 4 + 508821 ACAT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 217376 4 - 123690457 ACAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 48802 4 - 85730 ACAT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1456765 4 - 112612857 ACAT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 62441 4 + 4899514 ACAT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 61712 4 + 97742 ACAT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3712187 4 - 108555830 ACAT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 61803 4 + 85016 ACAT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1040534 4 - 1267912 ACAT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46485448 4 - 47448759 ACAT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 30014 4 + 8899380 ACAT i saiBol1.JH378197 C 0 I 205 s cebCap1.NW_016107581v1 4421248 4 + 4432243 ACAT i cebCap1.NW_016107581v1 I 725 C 0 s otoGar3.GL873538 19673180 4 - 27850971 ACAT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79133095 2 - 85426708 --AT i canFam3.chr2 C 0 I 2 e dasNov3.JH570393 1773394 0 - 2296528 C a score=2515462.000000 s hg38.chr3_KI270784v1_alt 173988 253 + 184404 TATGTCACCTATGAAATTTT-----------------------AGTAGCTACAG--------------------------------AGTAA-----TGTTCATACAGT-ATGTAGTCTTA-TACTGCTGAAATAATAAATTTAATGTCTTTA-TGTTGTCACATTTTAAGACCATA----------ATGAAGCAGATAAATTGATAT-CTTGTACCTGAAATAAGTATTTTGAAATTAAGATTCAATTAAGTGAGCCACTTTGACACTTAATTCTAGATTTCCCAGATGAACTGAAGTGT-GTTGCTCTGTCTTGTGGTGCTTTTCCT s panTro5.chr3 66873 253 - 202621043 TATGTCACCTATGAAATTTT-----------------------AGTAGCTACAG--------------------------------AGTAA-----TGTTCATACAGT-ATGTAGTCTTA-TACTGCTGAAATAATAAATTTAATGTCTTTA-TGTTGTCACATTTTAAGACCATA----------ATGAAGCAGATAAATTGATAT-CTTGTACCTGAAATAAGTATTTTGAAATTAAGATTCAATTAAGTGAGCCACTTTGACACTTAGTTCTAGATTTCCCAGATGAACTGAAGTGT-GTTGCTCTGTCTTGTGGTGCTTTTCCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 61799 253 - 205426864 TATGTCACCTATGAAATTTT-----------------------AGTAGCTACAG--------------------------------AGTAA-----TGTTCATACAGT-ATGTAGTCTTA-TACTGCTGAAATAATAAATTTAATGTCTTTA-TGTTGTCACATTTTAAGACCATA----------ATGAAGCAGATAAATTGATAT-CTTGTACCTGAAATAAGTATTTTGAAATTAAGATTCAATTAAGTGAGCCACTTTGACACTTAGTTCTAGATTTCCCAGATGAACTGAAGTGT-GTTGCTCTGTCTTGTGGTGCTTTTCCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 80289 253 + 508821 TATGTCACCTATGAAATTTT-----------------------AGTAGCTACAG--------------------------------AGTAA-----TGTTCATAAGGT-ATGTAGTCTTA-TACTGCTGAAATAATAAATTTAATGTCTTTA-TGTTGCCACAATTTAAGACCATA----------ATGAAGCAGATAAATGGATAT-CTTGTACCTGAAATAAGTATTTTGAAATTAAGATTCAATTAAGTGAGCCACTTTAACACTTAATTCTAGATTTCCCAGATGAACTGAAGTGT-GTTGCTCTGTCTTGTGGTGCTTTTCCT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 217380 249 - 123690457 CATGTCACCTATGAAATTTT-----------------------AGTAGCTACAG--------------------------------AGTAA-----TGTTCATAAGGT-ATGTGGTCTTA-TACTGCTGAAATAATAAATTTAATGTC-TTA-TATTGCCACATTTTAAGACCATA----------ATGAAGCAGACAGA--GATG--CTTGTACCTGAAATAAGTATTTTGAAATTAAGATTCAATTAAGTGAGCCACTTTGACACTTAATTTTAGATTTCCCAGATTAACTGAAGTGT-GTTGCTGTGTCTTGTGGTGCTTTTCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 48806 252 - 85730 --TGTCACCTATGAAATTGT-----------------------AGTAGCTACAG--------------------------------AGTAA-----TGTTCATAAGCT-ATGTAGTCTTA-TACTGCTGAAATAACAAATTTAATGTCTTTA-TGTTGCCACATTTTAAGACCACA----------ATGAAGCAGATAAATGGAAATGCTTGTACCTGAAATAAATATTTTGAAATTAAGATTCAATTAAGTGAGCCACTTTGACACTTAATTCTAGATTTCCCAGATGAACTGAAGTAT-GTTGCTGTGTCTTGTGGTGCTTTTCCT i rheMac8.chrUn_NW_014858614v1 C 0 I 314 s macFas5.chr15 1456769 254 - 112612857 CATGTCACCTATGAAATTTT-----------------------AGTAGATACAG--------------------------------AGCAA-----TGTTGATAAGGT-ATATAGTCTTA-TACTGCAGAAATAATAAATTTAATGTCTTTT-TGTTGCCACATTTTAAGACCATA----------ATGAAGCAGGTAAATGGAAATGCTTGTACCTGAAATATGTATTTTGAAATTAAGATTCAATTAAGTGAGCTGCTTTGACATTTAATTCTAGATTTCCCAGATGAACTGAAGTGT-GTTGCTGTGTCTTGTGATGCTTTTCCT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 62445 252 + 4899514 --TGTCACCTATGAAATTGT-----------------------AGTAGCTACAG--------------------------------AGTAA-----TGTTCATAAGCT-ATGTAGTCTTA-TACTGCTGAAATAACAAATTTAATGTCTTTA-TGTTGCCACATTTTAAGACCACA----------ATGAAGCAGATAAATGGAAATGCTTGTACCTGAAATAAATATTTTGAAATTAAGATTCAATTAAGTGAGCCACTTTGACACTTAATTCTAGATTTCCCAGATGAACTGAAGTAT-GTTGCTGTGTCTTGTGGTGCTTTTCCT i macNem1.NW_012020287v1 C 0 I 312 s cerAty1.NW_012005170v1 61716 252 + 97742 --TGTCATCTATGAAATTGT-----------------------AGTAGCTACAG--------------------------------AGTAA-----TGTTCATAAGCT-ATGTAGTCTTA-TACTGCTGAAATAACAAATTTAATGTCTTTA-TGTTGCCACATTTTAAGACCACA----------ATGAAGCAGATAAATGGAAATGCTTGTACCTGAAATAAATATTTTGAAATTAAGATTCAATTAAGTGAGCCACTTTGACACTTAATTCTAGATTTCCCAGATGAACTGAAGTGT-GTTGCTGTGTCTTGTGGTGCTTTTCCT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3712191 254 - 108555830 TATGTCACCTATGAAATTGT-----------------------AGTAGATACAG--------------------------------AGCAA-----TATTGATAAGGG-AGGTAGTCTTA-TACTACTGAAATAATAAATTTAATGTCTTTA-TGTTGCCACATTCTAAGACCATA----------ATGAAGCGGGTAAGTGGAAATGCTTGTACCTGAAATGTGTATTTTGAAATTAAGATTCAATTAAGTGAGCCACTTTGACACTTAATTCTAGATTTCCCAGATGAAGTGAAGTTT-GTTGCTGTGTCTTGTGATGCTTTTCCC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 61807 252 + 85016 --TGTCATCTATGAAATTGT-----------------------AGTAGCTACAA--------------------------------AGTAA-----TGTTCATAAGCT-ATGTAGTCTTA-TACTGCTGAAATAACAAATTTAATGTCTTTA-TGTTGCCACATTTTAAGACCACA----------ATGAAGCAGATAAATGGAAATGCTTGTACCTGAAATAAATATTTTGAAATTAAGATTCAATTAAGTGAGCCACTTTGACACTTAATTCTAGATTTCCCAGATGAACTGAAGTAT-GTTGCTGTGTCTTGTGGTGCTTTTCCT i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1040538 252 - 1267912 --TGTCACCTATGAAACTGT-----------------------AATAGCTACAG--------------------------------TGTAA-----TGTTCATAAGCT-ATGTAGTCTTA-TATTGCTGAAATAACAAATTTAATGTCTTTA-TGTTGCCACATTTTAAGACCATA----------ATGAAGCAGATAAATGGAAATGCTTGTACCTGAAATAAGTATTTTGAAATTAAGATTCAATTAAATGAGCCACTTTGACACTTAATTCTAGATTTCCCAGATGAACTGAAGTAT-GTTGCTATGTCTTGTGGTGCTTTTCCT i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46485452 254 - 47448759 TGTGTCACCTATGAGATTTT-----------------------AGTAGATACAG--------------------------------AGTAA-----TGTTGATGAGGT-ATGTAGTCTTA-TACTGCTGAAATAATAAATTGAATGTCTTTA-TGTTGCCACATTTTAAGACCATA----------ATGAAGCAGATAGGTGGAAATGCCTGTACTTGAAATAAATATTTTGAAATTAAGATTCAATTAAGTGAGCTGCTTTGACACTTAATTCTAGATTTCCCAGATGAACTGAAGTGT-GTTGCTGTGTCTTATGATGCTTTTCCT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 30223 247 + 8899380 TATATCACCTATAAAATTTT-----------------------AGCAGATACAG--------------------------------AGTAA-----TGTTGATAAGGT-ATGTAGTCTTA--ACTGCTG--ATAATAAATTTAATGTCTTTA-TGTTGGCACATTTTAAGACCAAA----------ATGAAGCAAATAAAT-GAAATGCTTGCACCTCAAATGAATATTTTGAAATTAAGATTCAATTAAGTGAGTTGCTTTGACACTTAATTCTAAATTTCCCAGATGAATTGAAGTGT-GT---TGTGTCTTGTGACACCTTTCCT i saiBol1.JH378197 I 205 C 0 s cebCap1.NW_016107581v1 4421252 247 + 4432243 TATGTCACCTGTAAAATTTT-----------------------AGTAGATACAG--------------------------------AGTAA-----TGTTGATAAAAT-ATGTAGTCTTA--ACTGCTG--ATAATAAATTTAATGTCTTTA-TGTTGGCACATTTTAAGACCATA----------ATGAAGCAAATAAATGGAAATGCTTGTACCTGAAATGAATATTTTGAAATTAAGATTCAAC----TGAGTTGCTTTGACACTTAATTCTAGATTTCCCAGATGAACAGAAGTGT-GTTGCTGTGTCTTGTGATGCTTTTCCT i cebCap1.NW_016107581v1 C 0 C 0 s otoGar3.GL873538 19673184 266 - 27850971 TGTGTCACCTATGAAATTTTGAGAGGTTAAATTACAAATTGTGAAGAGCTGTAG--------------------------------ACTAA-----TCTTAACAA------TTAGTCTTA-GACTGCTGAAATAACATATTTAGTGTCTTTA-TGTTGGCACATTTCAAGACCATG----------ATGAAGCAGATAAACAGAAGTGCTCGTACCTGAAATGAGTATTTTGAAATTCAGATTCAATTAAATGGGTTACTTTGATGGTTAATTTGAGATTTCCCAGAT-----GAAGTCT-ATTGCTGGATCCTGTGATACTTTCCT- i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79133099 283 - 85426708 CATGTCATGTATGAAACTTC-----------------------AAGAGGTTAAGTTATAAATTTTTTAAAAAAGTAGGCTGATATTAGTAATTGAGTGTTAAAAAAATAATTTAGTGTTAATACTACTAAAATAAT--------TGTAGTTATTGTCACCACATTTTAATACCATG----------ATGAA-CAGAAAACTGGAAAGGCTCATACCT-AAATGAGTATTTTGAAATTGAAGTTCAATTAAGTGGATTAATTTGACAGCTAATTCCAGATTTGTCACATGAACTGAAGTGTAGATACTGTATCTCA--GTACTTTTCTT i canFam3.chr2 I 2 C 0 s dasNov3.JH570393 1773394 246 - 2296528 -------CCTATGAAATTTT-----------------------AGGAGGTTAAGTTA-----------------------------TGCAT-----TGTTAATA-GAT-AAATAAT-TAA-CGCTGCTGAAATAATAATTTCAATCTT-----TGTCACCACTTTGTAAGACCATATAAGAACATGATGAAACAGATAAAAGGAAATGTTCATACCTAAATTGAGTTTTTTAAAGTTAAGATTAAAT-GGGTTACCTTTGTTGGCAGTCAA--------GTCCCAGATGAAATGAAGTGTAGATGCTGTATCTTGTAATAATTTTCCT i dasNov3.JH570393 C 0 C 0 a score=650674.000000 s hg38.chr3_KI270784v1_alt 174241 65 + 184404 TCAGTGG----CTCTTTTATGTA-TTTTAGTTGGCATAACTTTATTTTGATTCATATCAATGTGACTTAA s panTro5.chr3 67126 65 - 202621043 TCAGTGG----CTCTTTTATGTA-TTTTAGTTGGCATAACTTTATTTTGATTCATATCAATGTGACTTAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 62052 65 - 205426864 TCAGTGG----CTCTTTTATGTA-TTTTAGTTGGCATAACTTTATTTTGATTCATATCAATGTGACTTAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 80542 65 + 508821 TCAGTGG----CTCTTTTATGTA-TTTTAGTTGGCATAACTTTATTTTGATTCATATCAATGTGACTTAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 217629 65 - 123690457 TCAGTGG----CTCTTTTATGTA-TTTTAGTTGGTATAACTTTATTTTGATTCATATCAATGTGACTTAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 49372 65 - 85730 TCAGTGG----CTCTTTTATGTA-TTTTAGTTAGTATAACTTTATTTTGACTCATATTAATGTGACTTAA i rheMac8.chrUn_NW_014858614v1 I 314 C 0 s macFas5.chr15 1457023 69 - 112612857 TCAGTGGCTCTCTCTTTTATGTA-TTTTAGTTGTTATAACTTTGTTTTGATTCGTACCAATGTGACTTAA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 63009 65 + 4899514 TCAGTGG----CTCTTTTATGTA-TTTTAGTTAGTATAACTTTATTTTGACTCATATTAATGTGACTTAA i macNem1.NW_012020287v1 I 312 C 0 s cerAty1.NW_012005170v1 61968 65 + 97742 TCAGTGG----CTCTTTTATGTA-TTTTAGTTAGTATAACTTTATTTTGACTCATATTAATGTGACTTAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3712445 69 - 108555830 TCAGTGGCTCTCTCTTTTATGTA-TTTTGGTTGGTATAACTTTGTTTTGATTCATACCAATGTGACTTAA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 62059 65 + 85016 TCAGTGG----CTCTTTTATGTA-TTTTAGTTAGTATAACTTTATTTTGACTCATATTAATGTGACTTAA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1040790 65 - 1267912 TCAGTGG----CTTTTTTATGTA-TTTTAGTTAGTATAACTTTATTTTGACTCATATTAATGTGACTTAA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46485706 65 - 47448759 TCAGTAG----CTCTTTTATATA-TTTTAGTTAGTATAACTTTGTTTTGATTCCTGTCAATGTAACTTAA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 30470 65 + 8899380 TCAGTAA----CTCCTTTATGTA-TTTTAGTTGGTATAAATTTGTTTTGATTCATATCAGTGTGACTTAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107581v1 4421499 61 + 4432243 TCAGTAA----C----TTATGTA-TTTTAGTTGGTATAACTTTGTTTTCATTCATATCAATGTGACTTAA i cebCap1.NW_016107581v1 C 0 N 0 s otoGar3.GL873538 19673450 64 - 27850971 TCAGTAA----CT-TTTTATATA-TTTTAGTTGGTATTATTTTACTTTTATTCATGTTAATTTGACTTAA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79133382 58 - 85426708 TTGGTAG----C-CTTTTATACATTTTTGGTTAGCATACTTTTATCtttatttatataaattt------- i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1773640 63 - 2296528 TCAGTAG----CT-TTTTATACATTTTTAATCTATGTAATTTATTTTT--CTCATGTCCATTTGAATTAA i dasNov3.JH570393 C 0 C 0 a score=85707.000000 s hg38.chr3_KI270784v1_alt 174306 9 + 184404 GTCTGAAAA s panTro5.chr3 67191 9 - 202621043 GTCTGAAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 62117 9 - 205426864 GTCTGAAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 80607 9 + 508821 GTCTGAAAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 217694 9 - 123690457 GTCTGAAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 49437 9 - 85730 GTCTGAAAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1457092 9 - 112612857 GTCTGAAAA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 63074 9 + 4899514 GTCTGAAAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 62033 9 + 97742 GTCTGAAAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3712514 9 - 108555830 GTCTAAAAA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 62124 9 + 85016 GTCTGAAAA i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1040855 9 - 1267912 GTCTGAAAA i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46485771 9 - 47448759 GTCTCAAAA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 30535 9 + 8899380 GTCTGAAAA i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19673514 9 - 27850971 ATCTGAAAA i otoGar3.GL873538 C 0 I 227 s canFam3.chr2 79133440 2 - 85426708 -------aa i canFam3.chr2 C 0 I 1 s dasNov3.JH570393 1773703 9 - 2296528 ATCTGTACA i dasNov3.JH570393 C 0 C 0 a score=14546.000000 s hg38.chr3_KI270784v1_alt 174315 4 + 184404 ---TATG s panTro5.chr3 67200 4 - 202621043 ---TATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 62126 4 - 205426864 ---TATG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 80616 4 + 508821 ---TATG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 217703 4 - 123690457 ---TATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 49446 4 - 85730 ---TATG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1457101 4 - 112612857 ---TAGG i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 63083 4 + 4899514 ---TATG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 62042 4 + 97742 ---TATG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3712523 4 - 108555830 ---TATG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 62133 4 + 85016 ---TATG i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1040864 4 - 1267912 ---TATG i colAng1.NW_012116822v1 C 0 C 0 s calJac3.chr18 46485780 4 - 47448759 ---TGGG i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 30544 4 + 8899380 ---TATG i saiBol1.JH378197 C 0 C 0 s canFam3.chr2 79133443 3 - 85426708 ---ttt- i canFam3.chr2 I 1 C 0 s dasNov3.JH570393 1773712 4 - 2296528 CCTT--- i dasNov3.JH570393 C 0 C 0 e otoGar3.GL873538 19673523 227 - 27850971 I a score=2939527.000000 s hg38.chr3_KI270784v1_alt 174319 329 + 184404 TCAGTCTCACATTATGTA-TTTTTCTGACCACTTAATATTTTAAAGACATCTA-CTTGTTATAAAATCACAATTTGGAATAAATGTGGTAAATTTTAGC-AAAA-AATA-TTTGATTTAATGTTCCCACTGGTAGGTATTTATAATTTACTTTGAATA-TTTTT-ATTAATAATTAGCTCATAA----TTTACATTTCAAGTCTCCA-TGACTGTCATTTGGATATAACTTTGTCCAGTACAAAGATACTTGTAGCTGTCTGTGATTTGTGAGTTTGACATT-GAATCCCCATTTTCAGACTAATgaggggtg-gcagagttcatgtagagtgggaatgaagt s panTro5.chr3 67204 329 - 202621043 TCAGTCTCACATTATGTA-TTTTTCTGACCACTTAATATTTTAAAGACATCTA-CTTGTTATAAAATCACAATTTGGAATAAATGTGGTAAATTTTAGC-AAAA-AATA-TTTGATTTAATGTTCCCACTGGTAGGTATTTATAATTTACTTTGAATA-TTTTT-ATTAATCATTAGCTCATAA----TTTACATTTCAAGTCTCAA-TGACTGTCATTTGGATATAACTTTGTCCAGTACAAAGATACTTGTAGCTGTCTGTGATTTGTGAGTTTGACATT-GAATCTCCATTTTCAGACTAATgaggggtg-gcagagttcatgtagagtgggaatgaagt i panTro5.chr3 C 0 C 0 s panPan2.chr3 62130 329 - 205426864 TCAGTCTCACATTATGTA-TTTTTCTGACCACTTAATATTTTAAAGACATCTA-CTTGTTATAAAATCACAATTTGGAATAAATGTGGTAAATTTTAGC-AAAA-AATA-TTTGATTTAATGTTCCCACTGGTAGGTATTTATAATTTACTTTGAATA-TTTTT-ATTAATCATTAGCTCATAA----TTTACATTTCAAGTCTCAA-TGACTGTCATTTGGATATAACTTTGTCCAGTACAAAGATACTTGTAGCTGTCTGTGATTTGTGAGTTTGACATT-GAATCTCCATTTTCAGACTAATgaggggtg-gcagagttcatgtagagtgggaatgaagt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 80620 329 + 508821 TCAGTCTCACATTATGTA-TTTTTCTGACCACTTAATATTTTAAAGACATCTA-CTTGTTATAAAATCACAATTTGGAATAAATGTGGTAAATTTTAGC-AAAA-AATA-TTTGATTTAATGTTCCCACTGGTAGGTATTTATAATTTACTTTGAATA-TTTTT-ATTAATAATTAGCTCATAA----TTTACATTTCAAGTCTCAA-TGACTGTCATTTGGATATAACTTTGTCCAGTACAAAGATACTTGTAGGTGTCTGTGATTTGTGAGTTTGACATT-GAATCCCCATTTTCAGACTAATgaggggtg-gcagagttcatgtagagtgggaatgaagt i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 217707 327 - 123690457 TCAGTCTCACATTATGTA-TTTTTCTGACCACTTAATATTTTAAAGACATCTA-CTTGTTATAAAATCACAG-TTGGAATAAATGTGGT-AATTTTAGC-AAAA-AATA-TTTGATTTAATGTTCCCACTGGTAGGTACTTATAATTTACTTTGAATA-TTTTT-ATTAATAATTAGCTCATAA----TTTACATTTTAAGTCTCAA-TGACTATCACTTGGATATAACTTTGTCCAGTACAAAGATACTTGTAGCTGTCTGTGATTTGTGAGTTTGACACT-GAGTCCCCATTTTCAGACTAATGAGGAGTG-GCCGAGTTCATGTAGAGTGggaatgaagt i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 49450 327 - 85730 TCAGTCTCACATTATGTA-TTTTTCTGACCACTTAATATTTGAAAGACATCTA-CTTATTATAAAATCACAATTTGGAATAAAT---GTAAATTTTAGC-AAAA-AATA-TTTGATTTAATGTTCCCACTGGTAGGTATTTATAATTTACCTTGAATATTTTTT-ATTAATAATTAGCTCATAA----TTTACATTTTAAGTCTCAA-TGACTATCATTTGGATATAACTTTGTCCAGTACAAAGATAATTGTAGCGGTCTGTGATTTGTGAGTTTGACATT-GAATCCCCATTTTCAGAGTAATgaggggtg-gcagagttcacgtagagtgggaatgaagt i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1457105 330 - 112612857 TCAGTCTCACATTATGCA-TTTTTCTGACCACTTAGAATTTTAAAGACATCTA-CTTGCTATAAAATCACAATTTGGAATAAATGTGGTAAATTTTAGC-CAAA-AAAATTTTGATGTAATGTTCCCACTGGTAGGTATTTATAATTTACTGTCAATA-TTTTT-ATGAGTAATTAGCTCATAA----TTTACATTTTAAGTCTCAA-TGACTATCATTTGGACATAACTCTTTCCAGTACAAAGATACTTGTAACTGTCTGTGATTTATGAGTTTGACATT-GAATCCCCATTTTCAGACTAATgaggggtg-gcagagttcatggagagtgggatggaagt i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 63087 327 + 4899514 TCAGTCTCACATTATGTA-TTTTTCTGACCACTTAATATTTGAAAGACATCTA-CTTATTATAAAATCACAATTTGGAATAAAT---GTAAATTTTAGC-AAAA-AATA-TTTGATTTAATGTTCCCACTGGTAGGTATTTATAATTTACCTTGAATATTTTTT-ATTAATAATTAGCTCATAA----TTTACATTTTAAGTCTCAA-TGACTATCATTTGGATATAACTTTGTCCAGTACAAAGATACTTGTAGCGGTCTGTGATTTGTGAGTTTGACATT-GAATCCCCATTTTCAGAGTAATgaggggtg-gcagagttcacgtagagtgggaatgaagt i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 62046 329 + 97742 TCAGTCTCACATTATGTA-TTTTTCTGA-CACTTAATATTTGAAAGACATCTA-CTTGTTATAAAATCACAATTTGGAATAAATGTGGTAAATTTTAGCAAAAA-AATA-TTTGATTTAATGTTCCCACTGGTAGGTATTTATAATTTACTTTGAATA-TTTTT-CTTAATAATTAGCTCATAA----TTTACATTTTAAGTCTCAA-TGACTATCATTTGGATATAACTTTGTCCAGTACAAAGATACTTGTAGCTGTCTGTGATTTGTGAGTTTGACATT-GAATCCCCATTCTCAGAGTAATgaggggtg-gcagagttcacgtagagtgggaatgaagt i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3712527 328 - 108555830 TCAGTCTCACGTTATATA-TTTTTCTGATCACTTAGAATTTTAAAGACATCTA-CTTGTTATAAAATCACAATTTGGAATAAATGTGGTAAATTTTAGC-AAAA-AATA-TTTGATTTAATGTTCCCACTGGTAGGTATTTATAATTTATTGTGAATA--TTTT-ATGAATAATTAACTCATAA----TTTACATTTTAAGTCTCAA-TGACTGTCATTTATATATAACTCTTTCCCATACAAGGATACTTGTAGCTGTCTGTGATTTATGAGTTTGACATT-GAATCCCCATTTTCAGACTAATGAAGGGTG-GCAGAGTTCACGGAGAATGggatggaagt i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 62137 329 + 85016 TCAGTCTCACATTATGTA-TTTTTCTGACCACTTAATATTTGAAAGACATCTA-CTTGTTATAAAATCACAATTTGGAATAAATGTGGTAAATTTTAGC-AAAA-AATA-TTTGATTTAATGTTCCCACTGGTAGGTATTTATAATTTACTTTGAATA-TTTTT-ATTAATAATTAGCTCATAA----TTTACATTTTAAGTCTCAA-TGACTATCATTTGGATATAACTTTGTCCAGTACAAAGATACTTGTAGCTGTCTGTGATTTGTGAGTTTGACATT-GAATCCCCATTCTCAGAGTAATgaggggtg-gcagagttcacgtagagtgggaatgaagt i manLeu1.NW_012101680v1 C 0 C 0 s colAng1.NW_012116822v1 1040868 329 - 1267912 TCAGTCTCACATTATGTA-TTTTTCTGACCACTTAATATTTGAAAGACATCTA-CTTGTTATAAAATCACAATTTGGAATAAATGTGGTAAATTTTAGC-AAAA-AATA-TTTGATTTAATGTTCCCACTGGTAGGTATTTATAATTTACTTTGAATA-TTTTT-ATTAATAATTAGCTCATAA----TTTACATTTTAAGTCTCAA-TGACTATCATTTGGATATAACTTTGTCCAATACAAAGATACTTGTAGCTGTCTGTGATTTGTGAGTTTGACATT-GAATCCCCATTTTCAGAGTAATGAGGGATG-GCAGAGTTCACGTAGAGTGGGAATGAAGT i colAng1.NW_012116822v1 C 0 N 0 s calJac3.chr18 46485784 328 - 47448759 TCAGTCTCACATTATGTATTTTTTCTGACCACTTAATATTTTAAAGACATCTA-CTTGTCATAAAACCACAATTTGGAACAAATGTGGTAAATTTTAGC-AAAA-CATA-TTTGATTTAATGTTCCAGCTGGTAGGTATTTATAATTTAGTTTGAATA-TTTTT-ATTAATGATTAGCTC--AA----TTTACATTTTAAGTCTCAG-TGACTATCATTTGGCTATAATTTTTCCCGGTACAAAGATACTTGCAGCTGCCTGTGATTTATGAGTTTGACATT-GGGTCTCCATTTTCAGGCTAATGAGGGGTG-GTAGAGTGCATGTAAAgtggcaatgcagt i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 30548 325 + 8899380 TCAGTCTCATATTATGTA-ATTTTCTGACCACTTAATATTTTAAAGACATCTA-CTTGTTATAAAATCACAAGGTGGAATAAAT---GTAAATTTCAGC-AAAA-CACA-TTTGATTTAATGTTCCC-CTGGTAGGTATTCATAATTTACTTTGAATA-TTTTT-ATTAATAATTAGCTCATAA----TTTACATTTTAGGTCTCAA-TGGCTGTCATTTGTATATAACTTTATTCAGCACAAAGATACTTGTAGCTTTCTGTGATTTACAAGTTTGACATT-GGATCCTCATTTTTAGCTTGATGAGAGGTG-GCAGATTTGATGTAGAGTGggaacgaagt i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19673750 315 - 27850971 TCAATCTCAATTTATGTA-TTTTTATGACCTCTCAATTCTTTAAAGTGATCTACCTTTCTATTAAATCATAATTTGGAAATTAAGTGGTATATTTTAGC-AAAATCATA-TTTGGTTTAATCCTCTCACT----GGTACTTATGCTTTACCATGAATC-TTTTT-ACAGATAATTTGCTGATA----------ATTTCAAGGCTCAA-TGACTACCATTTAGATACAACTTTGTCCAATACAAAGATAGTTGTAGCTATCTGTGATTTATTAGTTTGTCATC-ACATCTCCGTTTTCGGTCTAATGA-------GCAGGATTCATgcatagtgggaatggagc i otoGar3.GL873538 I 227 C 0 s canFam3.chr2 79133446 271 - 85426708 ttaCTCTCAAATCATTTA-TTCTTATGACCTTTTGACTCTTTGAAGGCATCTA-TTTTTCATCAAATCATAATTTGGGATAACTGTGGTGAGTTTTAGC-AAAA-CTCA---------------------------------------------AATA-ACT----CAAATAATTTGCTC-------------ATTTCAAAACTCAATTAACTATCATTTGGGCATAAATTTTTCCAATACAAAGAAAATTATA--CTTTTGTGATTTATTGATTTGTCCCT-GGATCTCCATTTCCAG-CTACTgaggggtg-gcaggattcttgtgtagcaggagtggaat i canFam3.chr2 C 0 I 6 s dasNov3.JH570393 1773716 316 - 2296528 TCAGTCCCAATTTATGTA-TTATTATGACTGCTCAACTCATTAAAGGCACCAG-CTTTTCATTAAGTCATAATCTGAGACAAATGTGGTAAATTTTAGC-AAAA-TGTA-TTTGATTCATTGTTTCCATT----GCTACTTGTAATTTACTTTGAACA-TTTTTAACAAATGATTTGCTTATAATTACTTCTTATTTCAAGGCTCAA-TTACCATCATTTGGACATAGCTTG--CCTATACAGAGATAAGTGTAACTG-CTGTGGTTTGTTATGTTAGCACTGGAATCTCCCTGTT------------GGATGTGTggagtcca-gcgtagcaggtgtgcagt i dasNov3.JH570393 C 0 C 0 a score=1223004.000000 s hg38.chr3_KI270784v1_alt 174648 151 + 184404 gagtatgggacagagttgtaggagctgagctcagggagggaggtagaggccatgttatct---ag-ggacttgaaggccgttg----gaat---tttacttttactctgagataggaatct------------gttggaaggatttgaacaggtgactgaATGTGTGAGGAA--CT s panTro5.chr3 67533 151 - 202621043 gagtatgggacagagttgtaggagctgagctcagggagggaggtagaggccatgttatct---gg-ggacttgaaggccgttg----gaat---tttacttttactctgagataggaatct------------gttggaaggatttgaacaggtgactgaATGTGTGAGGAA--CT i panTro5.chr3 C 0 C 0 s panPan2.chr3 62459 151 - 205426864 gagtatgggacagagttgtaggagctgagctcagggagggaggtagaggccatgttatct---gg-ggacttgaaggccgtgg----gaat---tttacttttactctgagataggaatct------------gttggaaggatttgaacaggtgactgaATGTGTGAGGAA--CT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 80949 151 + 508821 gagtatgggacagagttgtaggagctgagctcagggagggaggtagaggccatgttatct---ag-ggacttgaaggccgttg----gaat---tttacttttattctgagataggaatct------------gttggaaggatttgaacaggtgactgaATGTGTGAGGAA--CT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 218034 151 - 123690457 gagtacaggacagagttgtaggagctgaggtcagggagggaggtagaggccatgttatct---ag-ggacttgaaggccgttg----aaat---tttacttttattctgagataggaatct------------gttggaaggatttgaacaggtgactgaATGTGTGAGGAA--AT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 49777 151 - 85730 gaatacgggacagagttgtaggagctgaggtcagggagggaagtagaggccatgttacct---ag-gaccttgaaggccattg----gaat---tttacttttattctgagatagaaatct------------gttggaaggatttgaacaggcaactgaATGTGTGAGGAA--CT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1457435 151 - 112612857 gagtacgggacacagatgtaggagctgaggtcagggagggagttagaggccatgttacct---ag-cgccttgaaggccgttg----gaaa---tttaattttattctgagataggaatct------------gttggaaggatttcaacagGCAACTGAATATGTGAGGAA--CT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 63414 151 + 4899514 gaatacgggacagagttgtaggagctgaggtcagggagggaagtagaggccatgttacct---ag-ggccttgaaggccattg----gaat---tttacttttattctgagatagaaatct------------gttggaaggatttgaacagGCAACTGAATGTGTGAGGAA--CT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 62375 151 + 97742 gaatacgggacagagttgtaggagctgaggtcagggagggaagtagaggccaggttacct---ag-ggccttgaaggccattg----gaat---tttacttttattctgagatagaaatct------------gttggaaggatttgaacaggcaactgaATGTGTGAGGAA--CT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3712855 151 - 108555830 gagtacgggacacagatgtaggagctgaggtcagggagggagttagaggccatgttacct---ag-cgccttgaaggctattg----gaat---tttacttttattctgagataggaatct------------gttggaaggatttcaataggtgattgaATATGTGAGGAA--CT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 62466 151 + 85016 gaatacgggacagagttgtaggagctgaggtcagggagggaagtagaggccatgttacct---ag-ggccttgaaggccattg----gaat---tttacttttattctgagatagaaatct------------gttggaaggatttgaacaggcaactgaATGTGTGAGGAA--CT i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46486112 151 - 47448759 gaggacatgacagagttgtaggagctgaggtcagagagggaggtagaggccatgttacct---ag-gaccttgaaggccactg----gaat---tttacgtttatcctgagataggaatct------------gttggaaagacttgaacCTGTGACTGAATATGTGAGAAA--CT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 30873 151 + 8899380 gagtatgggacagaattgtaggagctgaggtcagggagggatgtagaggccatgttacct---ag-ggtcttgaagactattg----gaat---tttactgttattctgagataggcatct------------gttggaaggattttaacaggcaactgaATATGTGAGAAA--CT i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19674065 156 - 27850971 aagtaggggagagagttgtagcagctgaggccccggagggaggtggaagctaggtcacgt---ag----------ggccatta----gaat---tttgcttttattctgagataggactcttaggactctgagataggactcatttgaGCATATGATTGACTATATGAAGAAGTCT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79133723 154 - 85426708 gagcagggaagggagccctaggagctgaggtcaaggaggga-gtagaagccaggttatgt---agggggcttgaaggccatta----gaatgacttcacttttgttctgagatagtaacct------------attggaaggttttgagcaaagggttgacTATGTGAAGAA--CT i canFam3.chr2 I 6 C 0 s dasNov3.JH570393 1774032 141 - 2296528 -ggtttgggg-agaatctcaatagctgaggtcagggagggaggtggaggtggggttaccgaaaag-ggcctggaaggctcttgtaaagact---tttgctcttattctgagataggaatct--------------tggaaggat-------------tgagtatgtgaggaA--CC i dasNov3.JH570393 C 0 I 168 a score=166824.000000 s hg38.chr3_KI270784v1_alt 174799 30 + 184404 C--AGGTTGAGTTGAGGGTCTGAGATGAATGA s panTro5.chr3 67684 30 - 202621043 C--AGGTTGAGTTGAGGGTCTGAGATGAATGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 62610 30 - 205426864 C--AGGTTGAGTTGAGGGTCTGAGATGAATGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 81100 30 + 508821 C--AGGTTGAGTTGAGGGTCTGAGATGAATGA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 218185 30 - 123690457 G--AGGTTGAGTTGAGGGTCTGAGATGAATGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 49928 27 - 85730 C--AGGTTGAGTT---GGTCTGAGATGAATGA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1457586 30 - 112612857 C--AGGTTGAGTTGAGGGTCTAAGGTGAATGA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 63565 27 + 4899514 C--AGGTTGAGTT---GGTCTGAGATCAATGA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 62526 27 + 97742 C--AGGTTGAGTT---GGTCTGAGATGAATGA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3713006 30 - 108555830 C--AGGTTGAGTTGAGGGCCTAAGATGAATGA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 62617 27 + 85016 C--AGGTTGAGTT---GGTCTGAGATGAATGA i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46486263 30 - 47448759 C--AAGTTGAGTTGAAGGTCTAAGATGAATGA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 31024 26 + 8899380 C--AGGTTGAATTGAGGGTCTAAG----ATGA i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19674221 25 - 27850971 A--ATGTTGATTTGAGCTTCTAATA-----AA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79133877 32 - 85426708 TGGAAGTTAATTTAAGCCTCTAATAAAAAAGA i canFam3.chr2 C 0 I 163 e dasNov3.JH570393 1774173 168 - 2296528 I a score=275770.000000 s hg38.chr3_KI270784v1_alt 174829 48 + 184404 ATAGTGGGCTGAATCAATCTGTCATGTAA----GAGAAT--ACCAAT-TTGGCAG--- s panTro5.chr3 67714 48 - 202621043 ATAGTGGGCTGAATCAATCTGTCATGTAA----GAGAAT--ACCAAT-TTGGCAG--- i panTro5.chr3 C 0 C 0 s panPan2.chr3 62640 48 - 205426864 ATAGTGGGCTGAATCAATCTGTCATGTAA----GAGAAT--ACCAAT-TTGGCAG--- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 81130 48 + 508821 ATAGTGGGCTGAATCAATCTGTCATGTAA----GAGAAT--ACCAAT-TTGGCAG--- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 218215 48 - 123690457 ATAGTGGGCTGAATCAATCTGTCATGTAA----GAGAAT--ACCAAC-TTGGCAG--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 49955 48 - 85730 ATAGCAGGCTGAATCAATCTGTCTTGTAA----GAGAAT--ACCGAT-TTGGCAG--- i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1457616 45 - 112612857 ATAGCGGGCTGAATCCATCTGTCATGTAA----GAGAAT-----GAT-TTGGCAG--- i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 63592 48 + 4899514 ATAGCAGGCTGAATCAATCTGTCTTGTAA----GAGAAT--ACCAAT-TTGGCAG--- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 62553 48 + 97742 ATAGCAGGCTGAATCAATCTGTCTTGTAA----GAAAAT--ACCAAT-TTGGCAG--- i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3713036 45 - 108555830 ATAGTGGGCTAAATCCATCTGTCATGTAA----GAGAAT-----GAT-TTGGCAG--- i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 62644 48 + 85016 ATAGCAGGCTGAATCAATCTGTCTTGTAA----GAAAAT--ACCAAT-TTGGCAG--- i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46486293 52 - 47448759 ATAGCAGGCTGAATCAATCTGTCATGTAAATAAAATAAT--ACCAAT-TTGGTGG--- i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 31050 52 + 8899380 ATAGTGGGCTGAATCAATCTGTCATGTAAGTAGGAGAAT--ACCAAT-TTGGCAG--- i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19674246 49 - 27850971 AAAGAGGG--AAAACATTTTG---TGTCA----TAGAATTTACCAACACCACCAGTCC i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79133909 163 - 85426708 I e dasNov3.JH570393 1774173 168 - 2296528 I a score=14157.000000 s hg38.chr3_KI270784v1_alt 174877 11 + 184404 GAAGACAACAC s rheMac8.chrUn_NW_014858614v1 50003 11 - 85730 GAAGATAACAC i rheMac8.chrUn_NW_014858614v1 C 0 I 13 s macNem1.NW_012020287v1 63640 11 + 4899514 GAAGATAACAC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 62601 11 + 97742 GAAGATAACAC i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 62692 11 + 85016 GAAGATAACAC i manLeu1.NW_012101680v1 C 0 C 0 s saiBol1.JH378197 31102 11 + 8899380 GAAAATAACAT i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19674295 6 - 27850971 -----CACCAC i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79133909 163 - 85426708 I e dasNov3.JH570393 1774173 168 - 2296528 I e calJac3.chr18 46486345 0 - 47448759 C e chlSab2.chr12 3713081 0 - 108555830 C e macFas5.chr15 1457661 0 - 112612857 C e nomLeu3.chr11 218263 0 - 123690457 C e panPan2.chr3 62688 0 - 205426864 C e gorGor5.CYUI01015884v1 81178 0 + 508821 C e panTro5.chr3 67762 0 - 202621043 C a score=1795.000000 s hg38.chr3_KI270784v1_alt 174888 2 + 184404 Ct s macNem1.NW_012020287v1 63651 2 + 4899514 CT i macNem1.NW_012020287v1 C 0 I 11 s cerAty1.NW_012005170v1 62612 2 + 97742 CT i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 62703 2 + 85016 CT i manLeu1.NW_012101680v1 C 0 C 0 s saiBol1.JH378197 31113 2 + 8899380 CT i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19674301 2 - 27850971 CA i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79133909 163 - 85426708 I e dasNov3.JH570393 1774173 168 - 2296528 I e calJac3.chr18 46486345 0 - 47448759 C e rheMac8.chrUn_NW_014858614v1 50014 13 - 85730 I e chlSab2.chr12 3713081 0 - 108555830 C e macFas5.chr15 1457661 0 - 112612857 C e nomLeu3.chr11 218263 0 - 123690457 C e panPan2.chr3 62688 0 - 205426864 C e gorGor5.CYUI01015884v1 81178 0 + 508821 C e panTro5.chr3 67762 0 - 202621043 C a score=-575.000000 s hg38.chr3_KI270784v1_alt 174890 4 + 184404 tctt s saiBol1.JH378197 31115 4 + 8899380 TCTT i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19674303 2 - 27850971 GC-- i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79133909 163 - 85426708 I e dasNov3.JH570393 1774173 168 - 2296528 I e calJac3.chr18 46486345 0 - 47448759 C e cerAty1.NW_012005170v1 62614 0 + 97742 C e rheMac8.chrUn_NW_014858614v1 50014 13 - 85730 I e manLeu1.NW_012101680v1 62705 0 + 85016 C e chlSab2.chr12 3713081 0 - 108555830 C e macNem1.NW_012020287v1 63653 11 + 4899514 I e macFas5.chr15 1457661 0 - 112612857 C e nomLeu3.chr11 218263 0 - 123690457 C e panPan2.chr3 62688 0 - 205426864 C e gorGor5.CYUI01015884v1 81178 0 + 508821 C e panTro5.chr3 67762 0 - 202621043 C a score=932.000000 s hg38.chr3_KI270784v1_alt 174894 24 + 184404 tttttttttttttttttttgagac s otoGar3.GL873538 19674305 21 - 27850971 ---ATCCCTATTTCTTTTTGAGAC i otoGar3.GL873538 C 0 I 95 e canFam3.chr2 79133909 163 - 85426708 I e dasNov3.JH570393 1774173 168 - 2296528 I e calJac3.chr18 46486345 0 - 47448759 C e cerAty1.NW_012005170v1 62614 0 + 97742 C e saiBol1.JH378197 31119 0 + 8899380 C e rheMac8.chrUn_NW_014858614v1 50014 13 - 85730 I e manLeu1.NW_012101680v1 62705 0 + 85016 C e chlSab2.chr12 3713081 0 - 108555830 C e macNem1.NW_012020287v1 63653 11 + 4899514 I e macFas5.chr15 1457661 0 - 112612857 C e nomLeu3.chr11 218263 0 - 123690457 C e panPan2.chr3 62688 0 - 205426864 C e gorGor5.CYUI01015884v1 81178 0 + 508821 C e panTro5.chr3 67762 0 - 202621043 C a score=0.000000 s hg38.chr3_KI270784v1_alt 174918 263 + 184404 ggagtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcccgggttcccgccgttctcctgcctcagcctcccgagtagctggaactacaggcgcccgccaccatgcccggctaatttttttgtatttttagtagagacggggtttcaccgttttagccgggatggtctcgatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagc e canFam3.chr2 79133909 163 - 85426708 I e dasNov3.JH570393 1774173 168 - 2296528 I e otoGar3.GL873538 19674326 95 - 27850971 I e calJac3.chr18 46486345 0 - 47448759 C e cerAty1.NW_012005170v1 62614 0 + 97742 C e saiBol1.JH378197 31119 0 + 8899380 C e rheMac8.chrUn_NW_014858614v1 50014 13 - 85730 I e manLeu1.NW_012101680v1 62705 0 + 85016 C e chlSab2.chr12 3713081 0 - 108555830 C e macNem1.NW_012020287v1 63653 11 + 4899514 I e macFas5.chr15 1457661 0 - 112612857 C e nomLeu3.chr11 218263 0 - 123690457 C e panPan2.chr3 62688 0 - 205426864 C e gorGor5.CYUI01015884v1 81178 0 + 508821 C e panTro5.chr3 67762 0 - 202621043 C a score=-533.000000 s hg38.chr3_KI270784v1_alt 175181 14 + 184404 caccgcgcccggcc s dasNov3.JH570393 1774341 14 - 2296528 TACTGATTAGGCAG i dasNov3.JH570393 I 168 C 0 e canFam3.chr2 79133909 163 - 85426708 I e otoGar3.GL873538 19674326 95 - 27850971 I e calJac3.chr18 46486345 0 - 47448759 C e cerAty1.NW_012005170v1 62614 0 + 97742 C e saiBol1.JH378197 31119 0 + 8899380 C e rheMac8.chrUn_NW_014858614v1 50014 13 - 85730 I e manLeu1.NW_012101680v1 62705 0 + 85016 C e chlSab2.chr12 3713081 0 - 108555830 C e macNem1.NW_012020287v1 63653 11 + 4899514 I e macFas5.chr15 1457661 0 - 112612857 C e nomLeu3.chr11 218263 0 - 123690457 C e panPan2.chr3 62688 0 - 205426864 C e gorGor5.CYUI01015884v1 81178 0 + 508821 C e panTro5.chr3 67762 0 - 202621043 C a score=57617.000000 s hg38.chr3_KI270784v1_alt 175195 14 + 184404 GAAGACAACACCTT s panTro5.chr3 67762 14 - 202621043 GAAGACAACACCTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 62688 14 - 205426864 GAAGACAACACTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 81178 14 + 508821 GAAGACAACACCTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 218263 14 - 123690457 GAAGACAACACCTT i nomLeu3.chr11 C 0 C 0 s macFas5.chr15 1457661 14 - 112612857 GAAGATAACACCTT i macFas5.chr15 C 0 C 0 s chlSab2.chr12 3713081 14 - 108555830 GAAGATAACACCTT i chlSab2.chr12 C 0 C 0 s calJac3.chr18 46486345 14 - 47448759 GAACATAACACCTT i calJac3.chr18 C 0 C 0 s otoGar3.GL873538 19674421 14 - 27850971 GAAGATAATACCTT i otoGar3.GL873538 I 95 C 0 s canFam3.chr2 79134072 14 - 85426708 GAGGGTAACACTTT i canFam3.chr2 I 163 C 0 s dasNov3.JH570393 1774355 14 - 2296528 GGGGATAACACTTT i dasNov3.JH570393 C 0 C 0 e cerAty1.NW_012005170v1 62614 0 + 97742 C e saiBol1.JH378197 31119 0 + 8899380 C e rheMac8.chrUn_NW_014858614v1 50014 13 - 85730 I e manLeu1.NW_012101680v1 62705 0 + 85016 C e macNem1.NW_012020287v1 63653 11 + 4899514 I a score=8696.000000 s hg38.chr3_KI270784v1_alt 175209 3 + 184404 -CTA s panTro5.chr3 67776 3 - 202621043 -CTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 62702 3 - 205426864 -CTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 81192 3 + 508821 -CTA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 218277 3 - 123690457 -CTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr15 1457675 3 - 112612857 -CTG i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 62614 3 + 97742 -CTG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3713095 3 - 108555830 -CTG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 62705 3 + 85016 -CTG i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46486359 3 - 47448759 -CTG i calJac3.chr18 C 0 C 0 s otoGar3.GL873538 19674435 3 - 27850971 -CTG i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79134086 3 - 85426708 -TTG i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1774369 3 - 2296528 CCC- i dasNov3.JH570393 C 0 C 0 e saiBol1.JH378197 31119 0 + 8899380 C e rheMac8.chrUn_NW_014858614v1 50014 13 - 85730 I e macNem1.NW_012020287v1 63653 11 + 4899514 I a score=48487.000000 s hg38.chr3_KI270784v1_alt 175212 10 + 184404 TGTTCCTCAC s panTro5.chr3 67779 10 - 202621043 TGTTCCTCAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 62705 10 - 205426864 TGTTCCTCAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 81195 10 + 508821 TGTTCCTCAC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 218280 10 - 123690457 TGTTCCTCAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr15 1457678 10 - 112612857 TGCCCCTCAC i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 62617 9 + 97742 TGTTCCTCA- i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3713098 10 - 108555830 TGTCCCTCAC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 62708 9 + 85016 TGTTCCTCA- i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46486362 10 - 47448759 TGTTCCTCAC i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 31119 10 + 8899380 TATCCCTCAC i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19674438 10 - 27850971 TGTCCTTCAC i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79134089 10 - 85426708 TGTCTTTAGC i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1774372 10 - 2296528 TGTCTTTAAA i dasNov3.JH570393 C 0 C 0 e rheMac8.chrUn_NW_014858614v1 50014 13 - 85730 I e macNem1.NW_012020287v1 63653 11 + 4899514 I a score=3500744.000000 s hg38.chr3_KI270784v1_alt 175222 453 + 184404 TGAATTCAGTAATAAAGGAGAATGTATACATATGAG---AAAAAGAAAGCTAATCTATGTGTGTGGTAATA-------------ATTTTCAAAG---TATGCATGTTAGAGTTAAATATTA---ACATA----ATTTAATAATAAGGCAATTTATAAAATTAATAACAAAAA--TATTTTATCAGGAGACTGTAAGGTAACCTCAAGAACAACTGGCCAGTCATCTTAAAAAA-TTTCCTATGTCAGAGTCTCCACTGGAAGGTACATCACATTGTCATATTAATTT---GGATGAGACATGGGCTTCAGAGAAGAAATTATATTTCAAGTAGGAAGTCAAATATGTATGGAATTTAACATGTCGACAGTTAATCTG---------TAGCTG-----------GTTGAATAATATAAACTG-TTTTAGGATACTAATTTCAGTGGACAGCTTGATtttttatttttattataattaa--ttattaccattttattacctttataatgt s panTro5.chr3 67789 453 - 202621043 TGAATTCAGTAATATAGGAGAATGTATACATATGAG---AAAAAGAAAGCTAATCCATGTGTGTGGTAATA-------------ATTTTCAAAG---TATGCATGTTAGAGTGAAATATTA---ACATA----ATTTAATAATAAGGCAATTTATAAAATTAATAACAAAAA--TATTTTATCAGGAGACTGTAAGGTAACCTCAAGAACAACTGGCCAGTCATCTTAAAAAA-TTTCCTATGTCAGAGTCTCCATTGGAAGGTACATCACATTGTCATATTAATTT---GGATGAGACATGGGCTTCAAGGAAGAAATTATATTTCAAGTAGGAAGTCAAATATGTATGGAATTTAACATGTCGACAGTTAATCTG---------TAGCTG-----------GTTGAATAATATAAACTG-TTTTAGGATACTAATTTCAGTGGACAGCTTGATtttttatttttattataattaa--ttattaccattttattaCCTTTATAATGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 62715 453 - 205426864 TGAATTCAGTAATATAGGAGAATGTATACATATGAG---AAAAAGAAAGCTAATCCATGTGTGTGGTAATA-------------ATTTTCAAAG---TATGCATGTTAGAGTGAAATATTA---ACATA----ATTTAATAATAAGGCAATTTATAAAATTAATAACAAAAA--TATTTTATCAGGAGACTGTAAGGTAACCTCAAGAACAACTGGCCAGTCATCTTAAAAAA-TTTCCTATGTCAGAGTCTCCACTGGAAGGTACATCACATTGTCATATTAATTT---GGATGAGACATGGGCTTCAAGGAAGAAATTATATTTCAAGTAGGAAGTCAAATATGTATGGAATTTAACATGTCGACAGTTAATCTG---------TAGCTG-----------GTTGAATAATATAAACTG-TTTTAGGATACTAATTTCAGTGGACAGCTTGATtttttatttttattataattaa--ttattaccattttattaCCTTTATAATGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 81205 450 + 508821 TGAATTCAGTAATAGAGGAGAATGTATACATATGAG---AAAAAGAAAGCTAATCTATGTGTGTGGTAATA-------------ATTTTCAAAG---TATGCATGTTAGAGTTAAATATTA---ACATA----ATTTAATAAT---GCAATTTATAAAATTAATAACAAAAA--TATTTTATCAGGAGACTGTAAGGTAACCTCAAGAACAACTGGCCAGTCATCTTAAAAAA-TTTCCTATGTCAGAGTCTCCACTGGAAGGTACATCACATTGTCATATTAATTT---GGATGAGACATGGGCTTCAAAGAAGAAATTATATTTCAAGTAGGAAGTCAAATATGTATGGAATTTAACATGTCGACAGTTAGTCTG---------TAGCTG-----------GTTGAATAATATAAACTG-TTTTAGGATACTAATTTCAGTGGACAGCTTGATtttttatttttattataattaa--ttattaccattttattacctttataatgt i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 218290 442 - 123690457 TGAACTCAGTAATAAAGGAGAATGTATACATATGAG---GAAAAG-AAGCTAATCTATGTGTGTGGTAATA-------------ATTTTCCAAG---TATGCATGTTAGAGTTAAATATTA---ACATA----ATTTAATAATAAGGCAATTTATAAAATTAATAACAAAAA--TATTTTATCAGGTGACTGTAAGGCAACCTCAAGAACAACTGGCCAGTCATCTTAAAAAA-TTTCCTATGTCAGAGTCTCCACTGGAAGGTACATCACATTGTCATATTAATTT---GGATGAGACACGGGCTTCAAAGAAGAAAT--TATTTCAAGTAGGAAGTCAAATATGTATGGAATTTAACATGTCGAC----AATCTG---------TAGCTG-----------GTTGAATAATATAAACTG-TTTTAGGATACTAATTTCAGTGGACAGCTTGATTTTGTATTTTTATTA----TAA--TTATTACCATTTTATTACCTTTATAATGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 50027 448 - 85730 TGAATTCAGTAATAAAGGAGAATGTGTACAAATGAG---GAAAAGAAAGTGAATCTATGTGTGTGGTAATA-------------ATTTCCAAAG---TATGCATATTAGAGTTAAATATTA-----ACA----ATTTAATAATAAGGCAATTTATAAAATTAGTAACAAAAA--TATTTTATCAGGTGACTCTAAGGCAACTTCAAGAACAACTGGCCAGTCACCTTAA-AAA-TTTCGTATGTCAGAGTCTCCACTGGAAGATACATCACATTGTCATCTTAATTT---GGATGAGACACGGGCTTCAAAGAAGAAAT--TATTTCAAGTAGGAAGTCAAGTATGTATGGAATTTAACATGTCTATAGTTAATCTG---------TAGCTG-----------GTTGAATAATATAAACTC-TTTTAGGATACTAATTTCAGTGGACAGATTGATTTTGTATTTTCATTATAATTAA--TTATTACCATTTTATTACCTTTATAACGT i rheMac8.chrUn_NW_014858614v1 I 13 C 0 s macFas5.chr15 1457688 448 - 112612857 TGAATTCAGTAATAAAGAAGAATGTGTACATATGAG---GAAAAGAAAGTGAATCTGTGTGTGTGGTAATA-------------ATTTTCAAAG---CATGTATACTA-AGTTAAATATTA-----TTAACATATTTAATAATAAGGCACTTTATAAAATTAGTAACAAAAA--TATTTTATTAGGTGATTGTGAGACAACTTCAAGAAGAACTGGCTGATCACCTTAA-AAATTTTCCTATGTCAGATTCTCCACTGGAAGGTACATCACATTGTCACATTAATTT---GGATGAGACACGGGCTTCAAAGAAGAAAT--TATTTCAAGTAGGAAGTCAAGTATGTGTGGAATTTAACATGTAGACAGTTAATCTG---------TAGCTG-----------GTTGGATAATATAAAGTC-TTTTAGGATACTAATTTCAGTGGACCACCTGGTTGTATATTTTCATTA----TAA--TTATCACCATTTTATTATCTTTATAGCGT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 63664 448 + 4899514 TGAATTCAGTAATAAAGGAGAATGTGTACAAATGAG---GAAAAGAAAGTGAATCTATGTGTGTGGTAATA-------------ATTTCCAAAG---TATGCATATTAGAGTTAAATATTA-----ACA----ATTTAATAATAAGGCAATTTATAAAATTAGTAACAAAAA--TATTTTATCAGGTGACTCTAAGGCAACTTCAAGAACAACTGGCCAGTCACCTTAA-AAA-TTTCGTATGTCAGAGTCTCCACTGGAAGATACATCACATTGTCATCTTAATTT---GGATGAGACACGGGCTTCAAAGAAGAAAT--TATTTCAAGTAGGAAGTCAAGTATGTATGGAATTTAACATGTCTATAGTTAATCTG---------TAGCTG-----------GTTGAATAATATAAACTC-TTTTAGGATACTAATTTCAGTGGACAGATTGATTTTGTATTTTCATTATAATTAA--TTATTACCATTTTATTACCTTTATAACGT i macNem1.NW_012020287v1 I 11 C 0 s cerAty1.NW_012005170v1 62626 444 + 97742 TGAATTCAGTAATAAAGGAGAATGTGTACAAATGAG---GAAAAGAAAGTGAATC----TGTGTGGTAATA-------------ATTTTCAAAG---TATGCATATTAGAGTTAAATATTA-----ACA----ATTTAATAATAAGGCAATTTATAAAATTAGTAACAAAAA--TATTTTATCAGGTGACTCTAAGGCAACTTCAAGAACAACTGGCCAGTCACCTTAA-AAA-TTTCGTATGTCAGAGTCTCCACTGGAAGATACATCACATTGTCATCTTAATTT---GGATGAGACACGGGCTTCAAAGAAGACAT--TATTTCAAGTAGGAAGTCAAGTATGTATGGAATTTAACATGTCTATAGTTAATCTG---------TAGCTG-----------GTTGAATAATATAAACTG-TTTTAGGATACTAATTTCAGTGGACAGATTGATTTTGTATTTTCATTATAATTAA--TTATTACCATTTTATTACCTTTATAACGT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3713108 454 - 108555830 TGAATTCAGTAATAAAGAAGAATGTGTACATATGAG---GAAAAGAAAGTGAATCTGTGTGTGTGGTAATA-------------ATTTTCAAAG---TATGTATGCTGGAGTTAAATATTATTAACATA----ATTTAATAATAAGGCACTTTATAAAATTGGTAACAAAAA--TATTTTATCAGGTGATTGTGAGACGACTTCAAGAAGAACTGGCTGATCACCTTAACAAA-TTTTCTATGTCAGAATCTCCACTGGAAGGTACATCACATTGTCATATTAATTT---GGATGAGACACGGGCTTCAAAGAAGAAAT--TATTTCAAGTAGGAAGTCAAGTATGTATGGAATTTAACATGTAGACCATTAATCTG---------TAGCTG-----------GTTGAATAATATAAAGTG-TTTTAGGATACTAATTTCAGTGGACAGCTTGATTTTGTAATTTCATTATAATTGA--TTATTACCATTTTATTATCTTTATAACGT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 62717 444 + 85016 TGAATTCAGTAATAAAGGAGAATGTGTACAAATGAG---GAAAAGAAAGTGAATC----TGTGTGGTAATA-------------ATTTTCAAAG---TATGCATATTAGAGTTAAATATTA-----ACA----ATTTAATAATAAGGCAATTTATAAAATTAGTAACAAAAA--TATTTTATCAGGTGACTCTAAGGCAACTTCAAGAACAACTGGCCAGTCACCTTAA-AAA-TTTCGTATGTCAGAGTCTCCACTGGAAGATACATCACATTGTCATCTTAATTT---GGATGAGACACGGGCTTCAAAGAAGACAT--TATTTCAAGTAGGAAGTCAAGTATGTATGGAATTTAACATGTCTATGGTTAATCTG---------TAGCTG-----------GTTGAATAATATAAACTG-TTTTAGGATACTAATTTCAGTGGACAGATTGATTTTGTATTTTCATTATAATTAA--TTATTACCATTTTATTACCTTTATAACGT i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46486372 470 - 47448759 TGAATTCAGTAATAAACAAAAATGTGTACATATGAG---GAAAAGA----GAGTCTGTGTGTGTGATAGTA-------------ATTTTCAAAG---TATATACATTAGAGTTAAATATTATGAACATA----ATTTAATAATAAGGCAATGTATAAAATTGGTAATAAAAA--TATTTTATCAGGTGATTGTGAGACAACTTCAAGAAGAACTGGCTGGTAGCCTTAAAAAC-GTATCTGTGCCAGAGTCTCCACTGGAAGGTACATCACATTGTCACATTAATTT---GGATGAGACACGAGCTTCAAAGAAAAAAT--TATTTCAAGTAGGAAGTCAGGTATGTATGGCATTTAACATGTCAACAGTTAATGTGTGATATAATTAACTGAATAATATAGTGTTGAATAATATAAAATG-TTTTAGGTTACTGACTTCAGTGGGCAACTTGATTTTGCATTTTAATTATAATTAA--TGATTACTGTTTTATTATCTTGATAATAT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 31129 437 + 8899380 TCAATTCAGTAATAAACAAGAATGTGCACATATGAG---GAAAAGGAAGTGAGTCTATGTGTCTGGTAACA-------------ATTTTCAAAG---TATTTATGTTAGAGGTAAATATTGTTAAC--A----ATTTAATACTAAGGCTATTTATAAAATTAGTAACAAAAT--TATTTTATCAGGTGACTACGAGACAACTTTCAGAAGAACTGGCTGATAACCTTAAAAAA-TTATCTATGTCAGAGTCTCCACTAGAAGGTACATCACATTGTCACATTAATTT---GGATAAGACATATGCCTCAAAGAAGAAAT--T---------------TCAAGTATGTATGGAATTTATCATGTCAACAGTTAATCTG---------TAGCTG-----------GTTGAATAATATAAAGTG-TTATAGGACACTAATTTCAGTGGAGAGCTTGATTTTGtatttttattatacttta--ttattactattttattatctttataaGGT i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19674448 456 - 27850971 TGAAATGAGTTATAAACAGGAGTATGTGCACATGAG---GAAAGGAAGGTAAATCGATGTATATAGTGCTG-------------TTTTTGAATGTTTTTTGAATGTTAGATTTAAATATTA---TTGAC----ATTTGGTAATAAGGTGATTTATAAAATCTGTAACAAAAAATTATCTTATCAGGTAGTTGTGAGACAACTTCAACAAGAACTGGCTGATACCCTAAAAAAG-CAGTCTATGTCAGAGGCTTCCCTGGAGGTTACATCACGTTACCGCATTAGTTTAGAAGATGAGACACAGGATTTAAAGAAGAAAT--TAGGTCAAATCAGAAGTCAAGTATGTATGAAATTTAACATGTCCACAATTGATCTA---------TAGCTG-----------ATGCAATAATATAAAGTGCTTTTAGCATATTAATCATAATACACCACTTTATtttttattttcatta----ctt--ttattacaattttattatctttataatat i otoGar3.GL873538 C 0 I 351 s canFam3.chr2 79134099 438 - 85426708 CAAATTCA---ATAAACAGCAGTGTGTACATTTTAG---GAAAAGAAGGTGAGTTGATGTATGTGGTGATA--------------------AAG---TACATATGTTAGAATTACATATTA-----TTA----ACATAATAATAAGATCATTTATAAAATCAGTAACAGAAG--TGTCTTATTAGGTAGTTATGAGACAATTTCAACAAGAACTGGCTGATGCCCTGAAAAAA-CAATCTATGTCAGAGGCTTCATTGGAGGTTACATCGCATTATCGTATTAATTTAGAAGATGAGGTACAGGATTTAAAGAAGAAAT--TAGATCAAATCAAAAGTCAGGTATGTATTAAATATAACATGTCAACAGTTTGTCTG---------TAGCTG------------TTAAATAATATAAAGTG-TTGTAGAATGCTAATTTCCATGGACCACTTTGTTTTGTATTTTCATTTTAAT-----TTAGCATAATTTTAGTGTCTTCACCATGC i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1774382 474 - 2296528 TGAATTCAGCGATAAACAGAAATGTATACATAAGAGGAAGAAAAGAAGGTGAATTGATGTATGTGGTGATATTTTTCAAATATATTTTTCAAAG---TATGTATCTTAGAATTAGGTTTTATGAACACA----ATTTATTAATAAACTGATTTCTAAAATCAGTAACAGAAA--TGTTTTATCAGGTAGTTGTAAGACAACTTCAACAAGAACTGGCTGATACCCTAAAAAAA-CAATCTATGTCAGAGGCTTCGCTGGAGGTTACATCCCGTTATCGCATTAATTTAGAAGATGAAACACAGGATTTAAAGAAGAAAT--TAGGTCAAATCAGATGTCAAGTATGTATGAAATTTAACGT-TCAGTAGTTAATCTA---------TAGCTC-----------TTTAAATAATGTATTTTA-TTTTAGGATACTAATTTTAGTGGACATTTTTCTTTTGTATTTTCattataattaattttattaaaattttattatctttttaaaGC i dasNov3.JH570393 C 0 C 0 a score=1146743.000000 s hg38.chr3_KI270784v1_alt 175675 152 + 184404 acttattTCTTAAACTCTGGCTTT-TATTCTGCCATT-TTGAAAAATAATTGCATA-----CGTTTTACAATATTTTCTCTTGGGAAAGTTGAGAAGTATAC-ATCATTCCTCACAGAAAATT---GG----C-TTTTTTC-CTGTTAAATAGTA-TTTTTAGATAATTT s panTro5.chr3 68242 152 - 202621043 ACTTATTTCTTAAACTCTGGCTTT-TATTCTGCCATT-TTGAAAAATAATTGCATA-----CGTTTTACAATATTTTCTCTTGGGAAAGTTGAGAATTATAC-ATCATTCCTCACAGAAAATT---GG----C-TTTTTTC-CTGTTAAACAGTA-TTTTTAGATAATTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 63168 152 - 205426864 ACTTATTTCTTAAACTCTGGCTTT-TATTCTGCCATT-TTGAAAAATAATTGCATA-----CGTTTTACAATATTTTCTCTTGGGAAAGTTGAGAATTATAC-ATCATTCCTCACAGAAAATT---GG----C-TTTTTTC-CTGTTAAACAGTA-TTTTTAGATAATTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 81655 152 + 508821 acttattTCTTAAACTCTGGCTTT-TATTCTGCCATT-TTGAAAAATAATTGCATA-----CGTTTTACAATATTTTCTTTTGGGAAAGTTGAGAATTATAC-ATCATTCCTCACAGAAAATT---GG----C-TTTTTTC-CTGTTAAACAGTA-TTTTTAGATAATTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 218732 152 - 123690457 ACTTATTTCTTAAACTCTGGCTTT-TAGTCTGCCATT-TTGAAAAATAATTGCATA-----CATTTGACAATATTTTCTCTTGGCAAAGTTGAGAATTATAC-ATCATTCCTCACAGAAAATT---GG----C-TTTTCTC-CTGTTAAACAGTA-TTTTTAGATAATTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 50475 152 - 85730 ACTTATTTCTTAAACTCTGGCTTT-TATTCTGCCATT-CTGAAAAATAATTGCATA-----CCTTTTATAATATTTTCTCTTGGGAAAGTTGAGAATTATAC-ATCATTCCTCACAGAAAATG---GA----C-TTTTTTC-CTGTTAAACAGTA-TTTTTAGATAATTT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1458136 158 - 112612857 ACTTATTTCTTCAACTCTGGCTCT-TGTTCTACCATT-TTGAAAAATAGTTGCATATGTTTTCTCTTACAATATTTACTCTTGGGAAAGTTGAGAATGATAC-AATATTCCTCACAGAAAATT---GA----CTTTTTTTC-CTGTTAAACAGTA-TTTTTAGATAATTT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 64112 152 + 4899514 ACTTATTTCTTAAACTCTGGCTTT-TATTCTGCCATT-CTGAAAAATAATTGCATA-----CCTTTTATAATATTTTCTCTTGGGAAAGTTGAGAATTATAC-ATCATTCCTCACAGAAAATT---GA----C-TTTTTTC-CTGTTAAACAGTA-TTTTTAGATAATTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 63070 152 + 97742 ACTTATTTCTTAAACTCTGGCGTT-TATTCTGCCATT-TTGAAAAATAATTGCATA-----CCTTTTATAATATTTTCTCTTGGGAAAGTTGAGAATTATAC-ATCATTCCTCACAGAAAATT---GA----C-TTTTTTC-CTGTTAAACAGTA-TTTTTAGATAATTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3713562 157 - 108555830 ACTTATTTCTTCAACTCTGGCTCT-TGTTCTGACATT-TTGAAAAATAGTTGCATATGTTTTCTCTTACAATGTTTACTCTTGGGAAAGTTGAGAATGATAA-ATCACTCCTCACAGAAAATT---GA----C-TTTTTTC-CTGTTAAACAGTA-GTTTTAGATAATTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 63161 152 + 85016 ACTTATTTCTTAAACTCTGGCTTT-TATTCTGCCATT-TTGAAAAATAATTGCATA-----CCTTTTATAATATTTTCTCTTGGGAAAGTTGAGAATTATAC-ATCATTCCTCACAGAAAATT---GA----C-TTTTTTC-CTGTTAAACAGTA-TTTTTAAGTAATTT i manLeu1.NW_012101680v1 C 0 I 3052 s calJac3.chr18 46486842 158 - 47448759 ACCTATTTCTTAAACTCTGGCTTT-TATTCTGCCATT-TTGAGAAATAATTGCATACCTTTTCTCTCACAATATTTACTCTTGGGAAAGTTGAGAATTATAT-ATCATTCCACACAGAAAATT---GA----C-TTTTTTTCCTGTTAAACAGTA-TTTTTAGATAATTT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 31566 157 + 8899380 ACTTATTTCTTAAACTCAGGATTT-TATTCTGCCATT-TTGAAAAATAATTGCATACCTTTTCTCTTGCAATATGTACTCTTGGAAAAGTGGAGAACCATAC-ATTATTCCTCACAGAAAATT---CA----C-TTTTTTT-CTGTTAAAGAGTA-TTTTTAGAAAATTT i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19675255 147 - 27850971 ACTTATTTCTTAAACTTTCACTTT-CATCCTGCCATTATTCTCTTATAGTTACATA-----CTTTTTTTTATAATAACTGTTAGGAAAGTTGAGAATTATAT-ATTTTTTCTCAGAGA--------------C-TTTTTTC-CTGTTAATCAGTAGTTTTTTAGTGATTT i otoGar3.GL873538 I 351 C 0 s canFam3.chr2 79134537 151 - 85426708 ACTTATTTATTAAATTCTGACTTTCCATTCTGCTATC-TGT-------GTTATATG-----TTTTTGCTTATAGCATTTACTAGGAAAGTTGAGACTTATGCAATTATTATTCACACAAATTG---AGGGACT-TTTTTTC-CTGCTAAACAAAt-tttttaaaagattt i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1774856 143 - 2296528 GCTTATTTCTGCAATTTTGACTTT-CATTCTGCTATT--------GGTATTATACA---------GTATAATATTTATTCTTGGGAAAGGTAAGAATTATGC-AGT-TTTCTCACGGAAGTTGAAAGA----C-TTTTTTC-CTACTAGACAGTA-TTTTTAATGAAGTC i dasNov3.JH570393 C 0 C 0 a score=43492.000000 s hg38.chr3_KI270784v1_alt 175827 7 + 184404 CCTTATT s panTro5.chr3 68394 7 - 202621043 CCTTATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 63320 7 - 205426864 CCTTATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 81807 7 + 508821 CCTTATT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 218884 7 - 123690457 CCTTATT i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 50627 7 - 85730 CCTTATT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1458294 7 - 112612857 CCTTATT i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 64264 7 + 4899514 CCTTATT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 63222 7 + 97742 CCTTATT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3713719 7 - 108555830 CCTTATT i chlSab2.chr12 C 0 C 0 s calJac3.chr18 46487000 7 - 47448759 CTTTATT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 31723 7 + 8899380 CTGTATT i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19675402 7 - 27850971 CTCTATT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79134688 7 - 85426708 atttatt i canFam3.chr2 C 0 I 6090 s dasNov3.JH570393 1774999 6 - 2296528 TCTTTT- i dasNov3.JH570393 C 0 C 0 e manLeu1.NW_012101680v1 63313 3052 + 85016 I a score=6175.000000 s hg38.chr3_KI270784v1_alt 175834 1 + 184404 G s panTro5.chr3 68401 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 63327 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 81814 1 + 508821 G i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr11 218891 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 50634 1 - 85730 G i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1458301 1 - 112612857 G i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 64271 1 + 4899514 G i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 63229 1 + 97742 G i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3713726 1 - 108555830 G i chlSab2.chr12 C 0 I 3580 s calJac3.chr18 46487007 1 - 47448759 G i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 31730 1 + 8899380 G i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19675409 1 - 27850971 C i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1775005 1 - 2296528 G i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79134695 6090 - 85426708 I e manLeu1.NW_012101680v1 63313 3052 + 85016 I a score=14028.000000 s hg38.chr3_KI270784v1_alt 175835 2 + 184404 CC s panTro5.chr3 68402 2 - 202621043 CC i panTro5.chr3 C 0 I 2991 s panPan2.chr3 63328 2 - 205426864 CC i panPan2.chr3 C 0 I 2988 s gorGor5.CYUI01015884v1 81815 2 + 508821 CC i gorGor5.CYUI01015884v1 C 0 I 2985 s nomLeu3.chr11 218892 2 - 123690457 CC i nomLeu3.chr11 C 0 N 0 s rheMac8.chrUn_NW_014858614v1 50635 2 - 85730 CC i rheMac8.chrUn_NW_014858614v1 C 0 I 2963 s macFas5.chr15 1458302 2 - 112612857 CC i macFas5.chr15 C 0 I 3361 s macNem1.NW_012020287v1 64272 2 + 4899514 CC i macNem1.NW_012020287v1 C 0 I 2970 s cerAty1.NW_012005170v1 63230 2 + 97742 CC i cerAty1.NW_012005170v1 C 0 I 3311 s calJac3.chr18 46487008 2 - 47448759 CC i calJac3.chr18 C 0 I 3907 s saiBol1.JH378197 31731 2 + 8899380 CC i saiBol1.JH378197 C 0 I 3985 s otoGar3.GL873538 19675410 2 - 27850971 CC i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1775006 2 - 2296528 CT i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79134695 6090 - 85426708 I e manLeu1.NW_012101680v1 63313 3052 + 85016 I e chlSab2.chr12 3713727 3580 - 108555830 I a score=273.000000 s hg38.chr3_KI270784v1_alt 175837 1 + 184404 A s otoGar3.GL873538 19675412 1 - 27850971 A i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1775008 1 - 2296528 A i dasNov3.JH570393 C 0 I 6148 e canFam3.chr2 79134695 6090 - 85426708 I e calJac3.chr18 46487010 3907 - 47448759 I e cerAty1.NW_012005170v1 63232 3311 + 97742 I e saiBol1.JH378197 31733 3985 + 8899380 I e rheMac8.chrUn_NW_014858614v1 50637 2963 - 85730 I e manLeu1.NW_012101680v1 63313 3052 + 85016 I e chlSab2.chr12 3713727 3580 - 108555830 I e macNem1.NW_012020287v1 64274 2970 + 4899514 I e macFas5.chr15 1458304 3361 - 112612857 I e panPan2.chr3 63330 2988 - 205426864 I e gorGor5.CYUI01015884v1 81817 2985 + 508821 I e panTro5.chr3 68404 2991 - 202621043 I a score=159.000000 s hg38.chr3_KI270784v1_alt 175838 4 + 184404 TTAT s otoGar3.GL873538 19675413 4 - 27850971 TGAT i otoGar3.GL873538 C 0 I 3495 e canFam3.chr2 79134695 6090 - 85426708 I e dasNov3.JH570393 1775009 6148 - 2296528 I e calJac3.chr18 46487010 3907 - 47448759 I e cerAty1.NW_012005170v1 63232 3311 + 97742 I e saiBol1.JH378197 31733 3985 + 8899380 I e rheMac8.chrUn_NW_014858614v1 50637 2963 - 85730 I e manLeu1.NW_012101680v1 63313 3052 + 85016 I e chlSab2.chr12 3713727 3580 - 108555830 I e macNem1.NW_012020287v1 64274 2970 + 4899514 I e macFas5.chr15 1458304 3361 - 112612857 I e panPan2.chr3 63330 2988 - 205426864 I e gorGor5.CYUI01015884v1 81817 2985 + 508821 I e panTro5.chr3 68404 2991 - 202621043 I a score=0.000000 s hg38.chr3_KI270784v1_alt 175842 2 + 184404 TA e canFam3.chr2 79134695 6090 - 85426708 I e dasNov3.JH570393 1775009 6148 - 2296528 I e otoGar3.GL873538 19675417 3495 - 27850971 I e calJac3.chr18 46487010 3907 - 47448759 I e cerAty1.NW_012005170v1 63232 3311 + 97742 I e saiBol1.JH378197 31733 3985 + 8899380 I e rheMac8.chrUn_NW_014858614v1 50637 2963 - 85730 I e manLeu1.NW_012101680v1 63313 3052 + 85016 I e chlSab2.chr12 3713727 3580 - 108555830 I e macNem1.NW_012020287v1 64274 2970 + 4899514 I e macFas5.chr15 1458304 3361 - 112612857 I e panPan2.chr3 63330 2988 - 205426864 I e gorGor5.CYUI01015884v1 81817 2985 + 508821 I e panTro5.chr3 68404 2991 - 202621043 I a score=10467.000000 s hg38.chr3_KI270784v1_alt 175844 23 + 184404 Tgaggtcaagagatcgagatcat s rheMac8.chrUn_NW_014858614v1 53600 23 - 85730 tgaggtcaggagttcaagaacag i rheMac8.chrUn_NW_014858614v1 I 2963 C 0 s macNem1.NW_012020287v1 67244 23 + 4899514 tgaggtcaggagttcaagaacag i macNem1.NW_012020287v1 I 2970 C 0 s calJac3.chr18 46490917 23 - 47448759 tgaggtcaggagttcaagaacag i calJac3.chr18 I 3907 C 0 e canFam3.chr2 79134695 6090 - 85426708 I e dasNov3.JH570393 1775009 6148 - 2296528 I e otoGar3.GL873538 19675417 3495 - 27850971 I e cerAty1.NW_012005170v1 63232 3311 + 97742 I e saiBol1.JH378197 31733 3985 + 8899380 I e manLeu1.NW_012101680v1 63313 3052 + 85016 I e chlSab2.chr12 3713727 3580 - 108555830 I e macFas5.chr15 1458304 3361 - 112612857 I e panPan2.chr3 63330 2988 - 205426864 I e gorGor5.CYUI01015884v1 81817 2985 + 508821 I e panTro5.chr3 68404 2991 - 202621043 I a score=2100.000000 s hg38.chr3_KI270784v1_alt 175867 1 + 184404 c s gorGor5.CYUI01015884v1 84802 1 + 508821 c i gorGor5.CYUI01015884v1 I 2985 C 0 s rheMac8.chrUn_NW_014858614v1 53623 1 - 85730 c i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macNem1.NW_012020287v1 67267 1 + 4899514 c i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 66543 1 + 97742 c i cerAty1.NW_012005170v1 I 3311 C 0 s manLeu1.NW_012101680v1 66365 1 + 85016 c i manLeu1.NW_012101680v1 I 3052 C 0 s calJac3.chr18 46490940 1 - 47448759 c i calJac3.chr18 C 0 C 0 e canFam3.chr2 79134695 6090 - 85426708 I e dasNov3.JH570393 1775009 6148 - 2296528 I e otoGar3.GL873538 19675417 3495 - 27850971 I e saiBol1.JH378197 31733 3985 + 8899380 I e chlSab2.chr12 3713727 3580 - 108555830 I e macFas5.chr15 1458304 3361 - 112612857 I e panPan2.chr3 63330 2988 - 205426864 I e panTro5.chr3 68404 2991 - 202621043 I a score=552992.000000 s hg38.chr3_KI270784v1_alt 175868 192 + 184404 ctggccaatatggtgaaaccctgtctc-tactaaaaatat-aaaaattagccaggaatggtggtgtgcacctct-gtcccagctacttgggaggctgaggcaggagaattacttgaacccaagaggtggaagttgtagtgagctaagatgttgccactgcactccagcctggatgacagagtgtgattccatctc s panTro5.chr3 71395 192 - 202621043 ctggccaatatggtgaaaccctgtctc-tactaaaaatat-aaaaattagccaggaatggtggtgtgcacctct-gtcccagctacttgggaggctgaggcaggagaattacttgaacccaagaggtggaagttgtagtgagctaagatgttgccactgcactccagcctggatgacagagtgtgattccatctc i panTro5.chr3 I 2991 C 0 s panPan2.chr3 66318 192 - 205426864 ctggccaatatggtgaaaccctgtctc-tactaaaaatat-aaaaattagccaggaatggtggtgtgcacctct-gtcccagctacttgggaggctgaggcaggagaattacttgaacccaagaggtggaagttgtagtgagctaagatgttgccactgcactccagcctggatgacagagtgtgattccatctc i panPan2.chr3 I 2988 C 0 s gorGor5.CYUI01015884v1 84803 193 + 508821 ctggccaatatggtgaaaccctgtctcttactaaaaatataaaaaattagccaggaatgatggtgtgca-ctct-gtcccagctacttgggaggctgaggcaggagaattacttgaacccaagaggtggaagttgtagtgagctaagatgttgccactgcactccagcctggatgacacagtgtgattccatctc i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 53624 193 - 85730 ctggccaatatggtgaaaccttgtctc-tactaaaaatat-aaaaattaaccaggaatggtggtgtgcacctgtagtcccagctacttgggaggctgaggcaggagaattacttgaacccaggaggtggaagttgcaataagctaagatggtgccactgcactccagcctggataacagcgtgtgactccatctc i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macNem1.NW_012020287v1 67268 193 + 4899514 ctggccaatatggcgaaaccttgtctc-tactaaaaatat-aaaaattaaccaggaatggtggtgtgcacctgtagtcccagctacttgggaggctgaggcaggagaattacttgaacccaggaggtggaagttgcaataagctaagatggtgccactgcactccagcctggataacagcgtgtgactccatctc i macNem1.NW_012020287v1 C 0 I 2 s cerAty1.NW_012005170v1 66544 193 + 97742 ctggccaatatggtgaaaccttgtctc-tactaaaaatat-aaaaattaaccaggaatgatggtgtgcacctatagtcccagctacttgggaggctgaggcaggagaattacttgaacccaggaggtggaagttgcaataagctaagatggtgccactgcactacagcctggataacagcatgtgactccatctc i cerAty1.NW_012005170v1 C 0 I 1 s manLeu1.NW_012101680v1 66366 193 + 85016 ctggccaatatggtgaaaccttgtctc-tactaaaaatat-aaaaattaaccaggaatgatggtgtgcacctatagtcccagctacttgggaggctgaggcaggagaattacttgaacccaggaggtggaagttgcaataagctaagatggtgccactgcactacagcctagataacagcgtgtgactccatctc i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46490941 191 - 47448759 ctagccaacatggtgaaaccctgtctc-taataaaaatac-aaaaattagctgagtgtggtggggtgcacctgtagtcctggctatttgggaggctgaggcagaagaatcacttgaacccaataggtgcaagttgcagtgagccgagatggcaccactatactccagcctagttgaaacagtgcaactcctta-- i calJac3.chr18 C 0 C 0 e canFam3.chr2 79134695 6090 - 85426708 I e dasNov3.JH570393 1775009 6148 - 2296528 I e otoGar3.GL873538 19675417 3495 - 27850971 I e saiBol1.JH378197 31733 3985 + 8899380 I e chlSab2.chr12 3713727 3580 - 108555830 I e macFas5.chr15 1458304 3361 - 112612857 I a score=19562.000000 s hg38.chr3_KI270784v1_alt 176060 6 + 184404 ---aaaaaa s panTro5.chr3 71587 6 - 202621043 ---aaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 66510 6 - 205426864 ---aaaaaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 84996 6 + 508821 ---aaaaaa i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79139565 6 + 117381234 ---aagaaa i nomLeu3.chr8 N 0 C 0 s rheMac8.chrUn_NW_014858614v1 53817 5 - 85730 ----aaaaa i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1461665 6 - 112612857 ---ggaaag i macFas5.chr15 I 3361 C 0 s macNem1.NW_012020287v1 67463 6 + 4899514 ---aaaaaa i macNem1.NW_012020287v1 I 2 C 0 s cerAty1.NW_012005170v1 66738 6 + 97742 ---aaaaaa i cerAty1.NW_012005170v1 I 1 C 0 s manLeu1.NW_012101680v1 66559 6 + 85016 ---aaaaaa i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46491132 9 - 47448759 aaaaaaaaa i calJac3.chr18 C 0 C 0 e canFam3.chr2 79134695 6090 - 85426708 I e dasNov3.JH570393 1775009 6148 - 2296528 I e otoGar3.GL873538 19675417 3495 - 27850971 I e saiBol1.JH378197 31733 3985 + 8899380 I e chlSab2.chr12 3713727 3580 - 108555830 I a score=8420.000000 s hg38.chr3_KI270784v1_alt 176066 3 + 184404 aag s panTro5.chr3 71593 3 - 202621043 aag i panTro5.chr3 C 0 C 0 s panPan2.chr3 66516 3 - 205426864 aag i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85002 3 + 508821 aag i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79139571 3 + 117381234 gag i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 53822 3 - 85730 aaa i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1461671 3 - 112612857 gaa i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 67469 3 + 4899514 aaa i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 66744 3 + 97742 aga i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 66565 3 + 85016 aag i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46491141 3 - 47448759 aaa i calJac3.chr18 C 0 C 0 s canFam3.chr2 79140785 3 - 85426708 AAT i canFam3.chr2 I 6090 C 0 e dasNov3.JH570393 1775009 6148 - 2296528 I e otoGar3.GL873538 19675417 3495 - 27850971 I e saiBol1.JH378197 31733 3985 + 8899380 I e chlSab2.chr12 3713727 3580 - 108555830 I a score=87416.000000 s hg38.chr3_KI270784v1_alt 176069 22 + 184404 aaaagaaaaaaaaa-----GGACAAAG s panTro5.chr3 71596 21 - 202621043 aaaagaaaaaaaa------GGACAAAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 66519 21 - 205426864 aaagaaaaaaaaa------GGACAAAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85005 22 + 508821 aaaagaaaaaaaaa-----GGACAAAG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79139574 27 + 117381234 gaaggaaggaaggaaggacagaCAAAG i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 53825 22 - 85730 gaaaaaaaaaaaaa-----ggacaaaa i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1461674 22 - 112612857 agaaaaagagaaaa-----gaaaAGAG i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 67472 22 + 4899514 aaaaaaaaaaaaaa-----GGACAAAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 66747 22 + 97742 aaaaaaaaaaaaaa-----GGACAAAA i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 66568 22 + 85016 aaaaaaaaaaaaaa-----GGACAAAA i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46491144 22 - 47448759 agaaaaagaaaaaa-----GGACAAAG i calJac3.chr18 C 0 I 43 s canFam3.chr2 79140788 22 - 85426708 ATAACAAAAAGGCA-----AGACAAAG i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1781157 22 - 2296528 AACAAAACAAAACA-----AGAAAAAG i dasNov3.JH570393 I 6148 C 0 e otoGar3.GL873538 19675417 3495 - 27850971 I e saiBol1.JH378197 31733 3985 + 8899380 I e chlSab2.chr12 3713727 3580 - 108555830 I a score=306955.000000 s hg38.chr3_KI270784v1_alt 176091 58 + 184404 TATGCTGGTCAATATCCTAAGGGTGAGACGATCCCCCTTCGAG-----------ATTAGAAAATAACA-----------C s panTro5.chr3 71617 58 - 202621043 TATGCTGGTCAATATCCTAAGGGTGAGACGATCCCCCTTCAAG-----------ATTAGAAAATAACA-----------C i panTro5.chr3 C 0 C 0 s panPan2.chr3 66540 58 - 205426864 TATGCTGGTCAATATCCTAAGGGTGAGACGATCCCCCTTCGAG-----------ATTAGAAAATAACA-----------C i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85027 57 + 508821 TATGCTGGTCAATATCCTAA-GGTGAGACGATCCCCCTTCGAG-----------GTTAGAAAATAACA-----------C i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79139601 57 + 117381234 TATACTGGTGAATATCCTAAGGGTGAGAC-AGCCCCCTTCAAT-----------ATTAGAAAATAACA-----------C i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 53847 58 - 85730 TATACTGGTCAATATCCTAAGGGCAAGACAAGCCCCCTTCGAG-----------ATTAGAAAATAATT-----------C i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1461696 58 - 112612857 TATACTGGTCAATATCCTAAGGGTGAGACAGTTCCCCTTCAAG-----------ATTAGAAAATAACA-----------C i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 67494 58 + 4899514 TATACTGGTCAATATGCTAAGGGCAAGACAAGCCCCCTTCGAG-----------ATTAGAAAATAATT-----------C i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 66769 69 + 97742 TATACTGGTCAATATCCTAAGGGCAAGACAAGCCCCCTTCGAG-----------ATTAGAAAATAATTAGAAAATAATAC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3717307 58 - 108555830 tATACTGGTCAATATCCTAAGGGTGAGACAGCCCCCCTTCAAG-----------ATTAGAAAATAATA-----------C i chlSab2.chr12 I 3580 C 0 s manLeu1.NW_012101680v1 66590 69 + 85016 TATACTGGTCAATATCCTAAGGGCAAGACAAGCCCCCTTCGAGATTAGAAAATAATTAGAAAATAATA-----------C i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46491209 57 - 47448759 TATACTGGTCAATATCCTAAGGGTGAGAC-TGTCCCCTTCAAG-----------ATTAGAAAATAGCA-----------C i calJac3.chr18 I 43 C 0 s canFam3.chr2 79140810 55 - 85426708 TACAATGGTCAGCATCCTGAGGGTAAG---GGTGCCCCCTGAG-----------ATTAAAAAATAATA-----------C i canFam3.chr2 C 0 I 441 s dasNov3.JH570393 1781179 34 - 2296528 ---------------TGTGAGGGTG---------TCCTCCGAG-----------AGTAGAAAGTAACA-----------A i dasNov3.JH570393 C 0 C 0 e otoGar3.GL873538 19675417 3495 - 27850971 I e saiBol1.JH378197 31733 3985 + 8899380 I a score=136287.000000 s hg38.chr3_KI270784v1_alt 176149 28 + 184404 TATATGCA-CAGTAACATCAATAAGAATC s panTro5.chr3 71675 28 - 202621043 TATATGCA-CAGTAACATCAATAAGAATC i panTro5.chr3 C 0 C 0 s panPan2.chr3 66598 28 - 205426864 TATATGCA-CAGTAACATCAATAAGAATC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85084 29 + 508821 TATATGCACCAGTAACATCGATAAGAATC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79139658 28 + 117381234 TGTACTCA-AAGTAACATCCATAAGAATC i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 53905 28 - 85730 TATATGCA-AAGTAACATCAATAACAATC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1461754 28 - 112612857 TATACTCA-AAGTAACATCAATAAGAATC i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 67552 28 + 4899514 TATATGCA-AAGTAACATCAGTAACAATC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 66838 28 + 97742 TATATGCA-AAGTAACATCAATAACAATC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3717365 28 - 108555830 TATATTCA-AAGTAACATCAATAAGAATC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 66659 28 + 85016 TATATGCA-AAGTAACATCAATAACAATC i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46491266 28 - 47448759 TGTACTCA-AAGTGACATCAACAAGAATG i calJac3.chr18 C 0 C 0 s dasNov3.JH570393 1781213 23 - 2296528 CACACTCA-AA-----AGCAGTGAGAATC i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79140865 441 - 85426708 I e otoGar3.GL873538 19675417 3495 - 27850971 I e saiBol1.JH378197 31733 3985 + 8899380 I a score=236099.000000 s hg38.chr3_KI270784v1_alt 176177 43 + 184404 AACATAAAATAGACATGATTCACTATCTACAAAAGTAACCTGC s panTro5.chr3 71703 41 - 202621043 AACATAAAATA--CATGATTCACTATCTACAAAAGTAACCTGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 66626 41 - 205426864 AACATAAAATA--CATGATTCACTATCTACAAAAGTAACCTGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85113 43 + 508821 AACATAAAATAGACATGATTCACTATCTACAAAAGTAACCTGC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79139686 43 + 117381234 AACATAAAATAGACAAGATTCACTATCTACAAAAGTAATCTGC i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 53933 39 - 85730 AACATAAAATAGACATGATTCA----CTACAAAGGTAATCTGC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1461782 43 - 112612857 AACATAAAATAGACAAGATTCACTATCTACTAAACTAATCTGC i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 67580 39 + 4899514 AACATAAAATAGACATGATTCA----CTACAAAGGTAATCTGC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 66866 39 + 97742 AACATAAAATAGACATGATTCA----CTACAAAGGTAATCTGC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3717393 43 - 108555830 AACATAAAATAGACAAGATTCACTATCTACAAAAGTAATCTGC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 66687 39 + 85016 AACATAAAATAGACATGATTCA----CTACAAAGGTAATCTGC i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46491294 43 - 47448759 AACATAAAATAGACAAGATTCATTATCTATGAAAGTAATCTAT i calJac3.chr18 C 0 C 0 s canFam3.chr2 79141306 42 - 85426708 aaTATAAAAATAACA-GATTAGCTAACTACAAAGGTAATCCAC i canFam3.chr2 I 441 C 0 s dasNov3.JH570393 1781236 43 - 2296528 AACATAGAATATAGGAGACTAACTATTTGCAAAGGTAACCCAC i dasNov3.JH570393 C 0 C 0 e otoGar3.GL873538 19675417 3495 - 27850971 I e saiBol1.JH378197 31733 3985 + 8899380 I a score=968969.000000 s hg38.chr3_KI270784v1_alt 176220 152 + 184404 ACCAAGTGGCAATGTCTGAGTGTGTGGTTGAGAA-------TATTGTCTATAATATGTGTACTAGAAAGAAGA---------------GGC--------------CTCAAGAAGAAGGTCAGAGCTGGAAATGTAGATTAGGGAATCT--GG-GTCAAA-ATTTTGAGATTTTAGGAGTCCTGAGAGAATTT s panTro5.chr3 71744 152 - 202621043 ACCAAGTGGCAATGTCTGAGTGTGTGGTTGAGAA-------TATTGTCTATAATATGTGTACTAGAAAGAAGA---------------GGC--------------CTCAAGAAGAAGGTCAGAGCTGGAAATGTAGATTAGGGAATCT--GG-GTCAAA-ATTTTGAGATTTTAGGAGTCCTGAGAGAATTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 66667 152 - 205426864 ACCAAGTGGCAATGTCTGAGTGTGTGGTTGAGAA-------TATTGTCTATAATATGTGTACGAGAAAGAAGA---------------GGC--------------CTCAAGAAGAAGGTCAGAGCTGGAAATGTAGATTAGGGAATCT--GG-GTCAAA-ATTTTGAGATTTTAGGAGTCCTGAGAGAATTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85156 151 + 508821 ACCAAGTGGCAATGTCTGAGTGTG-GGTTGAGAA-------TATTGTCTATAATATGTGTACTAGAAAGAAGA---------------GGC--------------CTCAAGAAGAAGGTCAGAGCTGGAAATGTAGATTAGGGAATCT--GG-GTCAAA-ATTTTGAGATTTCAGGAGTCCTGAGAGAATTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79139729 151 + 117381234 ACCAAGTAGCAATGTATGAGTGTGTGGTTGAGAA-------TATTGTCTATAATATGTGTACTAGAGGGAAGA---------------GGC--------------CTCAGTAAAAAGGTCAGAGCTGGAAATTTATATTAGGGAATCC--GG-GTTAAT-GTTTTGAGATTTTA-GAGTTCTGAGAGAATTT i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 53972 150 - 85730 ACCAAGTAGCAACGTATGAGTGTGTGGTTGAGAA-------TATTGTCTATAATACGTGTAAGA--AAGAAGA---------------GGC--------------CTCAAGAAGCAGTTCAGAGCTGGAAATGTAGATTAGGGAATCT--GG-GTCAAA-ATTTTGAGATTCTAGGAGTCCTAAGAGAATTT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1461825 159 - 112612857 ACCGAGTAGCAATATATGAGTGTGTGGTTGGCAACAATATGTGTTGTCTACAATATGTGTGCTAGAAGGAAGA---------------GGC--------------CTCAGTAAAAAGGTCAGAGCTGGAAATGTATATTAGGGAATCT--GG-GTTAAC-ATTTTGAGATTTTAGGAGTTCTGAGAGAGTGT i macFas5.chr15 C 0 I 1 s macNem1.NW_012020287v1 67619 148 + 4899514 ACCAAGTAGCAACGTATGAGTGTGTGGTTGAGAA-------TATTGTCTATAATACGTGTAATA----GAAGA---------------GGC--------------CTCAAGAAGCAGTTCAGAGCTGGAAATGTAGATTAGGGAATCT--GG-GTCAAA-ATTTTGAGATTCTAGGAGTCCTAAGAGAATTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 66905 152 + 97742 ACCAAGTAGCAACGTATGAGTGTGTGGTTGAGAA-------TATTGTCTATAATATGTGTACTAGAAAGAAGA---------------GGC--------------CTCAAGAAGCAGTTCAGAGCTGGAAATGTAGATTAGGGAATCT--GG-GTCAAA-ATTTTGAGATTCTAGGAGTCCTAAGAGAATTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3717436 152 - 108555830 ACCAAGTAGCAATGTATGAGTGTGTGGTTGAGAA-------TGTTGTCTATAATATGTGTACCAGAAGGAAGA---------------AGC--------------TTCAGTAAAAAGGTCAGAGTTGGAAATATATATTAGGGAATCC--AG-GTTAAC-CTTTGGAGATTTTAGGAGTTCTGAGAGAATTT i chlSab2.chr12 C 0 I 1 s manLeu1.NW_012101680v1 66726 153 + 85016 ACCAAGTAGCAACGTAAGAGTGTGTGGTTGAGAA-------TATTGTCTATAATATGTGTACTAGAAAGAAGA---------------GGC--------------CTCAAGAAGCAGTTCAGAGCTGGAAATGTAGATTAGGGAATCT--GG-GTCAAAGATTTTGAGATTCTAGGAGTCCTAAGAGAATTT i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46491337 152 - 47448759 ACCAAGTAGCAATGTATGAGCATGTGGTTGAGAA-------TATTGTCTATAATATGTGTACCAGAAGGAAGA---------------GGC--------------CTCAAGAAAAAGGTCAGAGCTGGAAATGTAGATTAGGGAATCT--GG-GTCAAA-GTTTTGAGATTTTAGGAGCCCTGAGAGAGTTT i calJac3.chr18 C 0 C 0 s otoGar3.GL873538 19678912 136 - 27850971 ACCAAGGAATGGTTGATGAGTGTGTGGTTAAGAC-------TGTTGTCAATGAGAAGTGAACCAG---GAGGA---------------GCC--------------C------------TCAGGGCTGGAAACGTAGAGGAGGGAATCC--GG-GTTGAA-GCCT-GAGTTTTAAGAAGTTCTGAGAGAATTT i otoGar3.GL873538 I 3495 C 0 s canFam3.chr2 79141348 164 - 85426708 ATCAGGTAACAGCTTTTGAGTGAGTGGTTGAAAA-------TAATGTCTATGAA----GAACTAGAAGGAAGATTGAAAAGGACAGATGAC--------------CTCAGTAAATGGGTCAAGGCTGAAAATGTAGATTAGAGATTCT--GATTTTGAA-GCCTTGAGATTTGGAGAACTCTGAGAGCATGT i canFam3.chr2 C 0 I 1 s dasNov3.JH570393 1781279 160 - 2296528 ACCCTG----AATTAATGAATGTG---TTGAGAA-------TATTGGCTATGAGAAGTGAACCAGAAGGAAGA---------------GGTAAAAGTACAGATGATTCAGTAAAGAGGTTAAGGCTGGAAATGTAGCATAGAGAATCTCAGG-ATTAAG-TCTTTGAGATTTAAGGAACTCAGAGAGTTTT- i dasNov3.JH570393 C 0 C 0 e saiBol1.JH378197 31733 3985 + 8899380 I a score=34620.000000 s hg38.chr3_KI270784v1_alt 176372 5 + 184404 AAAAG s panTro5.chr3 71896 5 - 202621043 AAAAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 66819 5 - 205426864 AAAAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85307 5 + 508821 AAAAG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79139880 5 + 117381234 AAAAG i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 54122 5 - 85730 AAAAG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1461985 5 - 112612857 AAAAG i macFas5.chr15 I 1 C 0 s macNem1.NW_012020287v1 67767 5 + 4899514 AAAAG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 67057 5 + 97742 AAAAG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3717589 5 - 108555830 AAAAG i chlSab2.chr12 I 1 C 0 s manLeu1.NW_012101680v1 66879 5 + 85016 AAAAG i manLeu1.NW_012101680v1 C 0 C 0 s canFam3.chr2 79141513 5 - 85426708 aaaag i canFam3.chr2 I 1 C 0 s dasNov3.JH570393 1781439 5 - 2296528 AAAAA i dasNov3.JH570393 C 0 C 0 e otoGar3.GL873538 19679048 0 - 27850971 C e calJac3.chr18 46491489 0 - 47448759 C e saiBol1.JH378197 31733 3985 + 8899380 I a score=47476.000000 s hg38.chr3_KI270784v1_alt 176377 9 + 184404 AGGAATAGT s panTro5.chr3 71901 9 - 202621043 AGGAATAGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 66824 9 - 205426864 AGGAATAGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85312 9 + 508821 AGGAATAGT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79139885 9 + 117381234 AGGAGTAGC i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 54127 9 - 85730 AGGAATAGC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1461990 9 - 112612857 AGGAGTAGC i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 67772 9 + 4899514 AGGAATAGC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 67062 9 + 97742 AGGAATAGC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3717594 9 - 108555830 AGGAGTAAC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 66884 9 + 85016 AGGAATAGC i manLeu1.NW_012101680v1 C 0 C 0 s canFam3.chr2 79141518 9 - 85426708 aggaatagc i canFam3.chr2 C 0 I 310 e dasNov3.JH570393 1781444 0 - 2296528 C e otoGar3.GL873538 19679048 0 - 27850971 C e calJac3.chr18 46491489 0 - 47448759 C e saiBol1.JH378197 31733 3985 + 8899380 I a score=175383.000000 s hg38.chr3_KI270784v1_alt 176386 42 + 184404 ggctgggcgtgatggctcatgcctgtaatcccagcactttgg s panTro5.chr3 71910 42 - 202621043 ggctgggcgtggtggctcacgcctgtaatcccagcactttgg i panTro5.chr3 C 0 C 0 s panPan2.chr3 66833 42 - 205426864 ggctgggcgtggtggctcacgcctgtaatcccagcactttgg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85321 42 + 508821 ggctgggcgtggtggctcatgcctgtaatcccagcactttgg i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79139894 41 + 117381234 Agccgggcatgatggctcacgcctgt-attccagcactttgg i nomLeu3.chr8 C 0 M 240 s rheMac8.chrUn_NW_014858614v1 54136 42 - 85730 Agctgggtgtggttgctcacacctgtaattgcagcactctgg i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1461999 42 - 112612857 Agctgggcgtggtggctcatgcctgtaatcccagcactttgg i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 67781 42 + 4899514 Agctgggtgtggttgctcacacctgtaattgcagcactctgg i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 67071 42 + 97742 Agctgggtgtggttgctcacacctgtaattgcagcactctgg i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3717603 42 - 108555830 Agccgggcatggtggctcatgcctgtaatcccagcactttga i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 66893 42 + 85016 Agctgggtgtggttgctcacacctgtaattgcagcactctgg i manLeu1.NW_012101680v1 C 0 C 0 e canFam3.chr2 79141527 310 - 85426708 I e dasNov3.JH570393 1781444 0 - 2296528 C e otoGar3.GL873538 19679048 0 - 27850971 C e calJac3.chr18 46491489 0 - 47448759 C e saiBol1.JH378197 31733 3985 + 8899380 I a score=547858.000000 s hg38.chr3_KI270784v1_alt 176428 165 + 184404 gaggccgaggtgggcagatcatga-ggtcaggag-ttcaagaccaacctggccaacat-ggtgaaaccccgtctctact-aaaaatacaaaaaattagccaggcatggtggt-gggcacctgtaatcccagctacgtg--ggaggccgaggcaggagaatcgcttgaacctg s panTro5.chr3 71952 165 - 202621043 gaggccgaggtgggcagatcatga-ggtcaggag-ttcaagaccaacctggccaacat-ggtgaaaccccgtctctact-aaaaatacaaaaaattagccaggcatggtggt-gggcacctgtaatcccagctacgtg--ggaggctgaggcaggagaatcgcttgaacctg i panTro5.chr3 C 0 C 0 s panPan2.chr3 66875 165 - 205426864 gaggccgaggtgggcagatcatga-ggtcaggag-ttcaagaccaacctggccaacat-ggtgaaaccccgtctctact-aaaaatacaaaaaattagccaggcatggtggt-gggcacctgtaatcccagctacgtg--ggaggctgaggcaggagaatcgcttgaacctg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85363 172 + 508821 gaggctgaggtgggaagatcatgagggtcaggagtttcaagaccaacctggccaacatgggtgaaaccccatctctactaaaaaatacaaaaaattagccaggcatggtggtggggcacctgtaatcccagctacgtggtggaggccaaggcaggagaatcgcttgaacctg i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 54178 164 - 85730 gaggctgaggtgggcagatcatga-ggtcaggag-ttcaagaccagcctggccaacat-agtgata-cgtgtctctact-aaaaatacaaaaaattagccaagtgtcgtgac-gggcacctgtaatcccagctactta--ggaggctgaggcaggagaatcacttgaacccc i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1462041 164 - 112612857 gtggccgaggtgggcggatcatga-ggtcaggag-ttcaaggccagcctggccaacat-catgaaaccccatctgtact-aaaactacaaacaattagctgggcaaggtggt-gggcatccgtaatcccaactgctcg--ggaggctgaga-aggataatcgcttgaacccg i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 67823 164 + 4899514 gaggctgaggtgggcagatcatga-ggtcaggag-ttcaagaccagcctggccaacat-agtgata-cgtgtctctact-aaaaatacaaaaaattagccaagtgtcgtgac-gggcacctgtaatcccagctactta--ggaggctgaggcaggagaatcacttgaacccc i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 67113 164 + 97742 gaggccaaggtgggcagatcacga-ggtcaggag-ttcaagaccagcctggccaacat-agtgata-catgtctctact-aaaaatacaaaaaattagccaagtgtcgtcac-gggcacctgtaatcccagctactta--ggaggctgaggcaggagaatcacttgaacccc i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3717645 165 - 108555830 gagactgagacgggcggatcatga-ggtcaggag-ttcaagacctgcctgaccaacat-agtgaaaccctatccctact-aaaaatacaaacgattagctgggtgaggtggt-gggcacctgtaatcccagctacttg--ggaggctgagacaggataatcacttgaactcg i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 66935 164 + 85016 gaggccgaggtgggcaggtcacga-ggtcaggag-ttcaagaccagcctggccaacat-agtgata-cgtgtctctact-aaaaatacaaaaaattagccaagtgtcgtgac-gggcacctgtaatcccagctactta--ggaggctgaggcaggagaatcacttgaacccc i manLeu1.NW_012101680v1 C 0 C 0 e canFam3.chr2 79141527 310 - 85426708 I e dasNov3.JH570393 1781444 0 - 2296528 C e otoGar3.GL873538 19679048 0 - 27850971 C e calJac3.chr18 46491489 0 - 47448759 C e saiBol1.JH378197 31733 3985 + 8899380 I e nomLeu3.chr8 79139935 240 + 117381234 M a score=142052.000000 s hg38.chr3_KI270784v1_alt 176593 33 + 184404 ggaggcagaggttgcagtgagcggagatcacgc s panTro5.chr3 72117 33 - 202621043 ggaggcggaggttgcagcgagcggagatcacgc i panTro5.chr3 C 0 C 0 s panPan2.chr3 67040 33 - 205426864 ggaggcggaggttgcagcgagcggagatcacgc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85535 33 + 508821 ggtggcagaggttgcagtgagcggagatcacgc i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 54342 33 - 85730 ggaggcagaggttgcagtgagtggagatcacac i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1462205 33 - 112612857 ggaggtggaggttgtggtgagtggagatcgtgc i macFas5.chr15 C 0 I 338 s macNem1.NW_012020287v1 67987 33 + 4899514 ggaggcagaggttgcagtgagtggagatcacac i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 67277 33 + 97742 ggaggcagaggttgcagtgagcggagatcacac i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3717810 33 - 108555830 agaggtggaggttgcagtgagtggagatcgcgc i chlSab2.chr12 C 0 I 347 s manLeu1.NW_012101680v1 67099 33 + 85016 ggaggcagaggttgcagtgagcggagatcacac i manLeu1.NW_012101680v1 C 0 C 0 s saiBol1.JH378197 35718 33 + 8899380 ggaggcggaggttgccatgagccgagatggcgc i saiBol1.JH378197 I 3985 C 0 e canFam3.chr2 79141527 310 - 85426708 I e dasNov3.JH570393 1781444 0 - 2296528 C e otoGar3.GL873538 19679048 0 - 27850971 C e calJac3.chr18 46491489 0 - 47448759 C e nomLeu3.chr8 79139935 240 + 117381234 M a score=134308.000000 s hg38.chr3_KI270784v1_alt 176626 79 + 184404 cactgcactccagcctggacaac-agtgcaagactccgtctcaaaaaaaaaa--caaaaacaaaaaaacaaaaaACAAACAA s panTro5.chr3 72150 81 - 202621043 cactgcactccagcctggacaac-agtgcaagactccgtctcaaaaaaaaaaaacaaaaacaaaaaaacaaaaaacaaaCAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 67073 79 - 205426864 cactgcactccagcctggacaac-agtgcaagactccgtctcaaaaaacaaaaacaaaaacaaaaaa--caaaaacaaacaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85568 51 + 508821 cactgcactccagcctggacaac-agtgcaagactcc-tctc-----------------------------aaaacaaacaa i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 54375 61 - 85730 cactgcactccagtctggatgac-agtgcgagactccgtctcgaaaaaa--------------------caaaacaaaacaa i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macNem1.NW_012020287v1 68020 61 + 4899514 cactgcactccagtctggatgac-agtgcgagactccgtctcgaaaaaa--------------------caaaacaaaacaa i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 67310 61 + 97742 cactgcactccagtctagatgac-agtgcgagactccgtctcgaaaaaa--------------------caaaacaaaacaa i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 67132 61 + 85016 cactgcactccagtctggatgac-agtgcgagactccgtctcgaaaaaa--------------------caaaacaaaacaa i manLeu1.NW_012101680v1 C 0 C 0 s saiBol1.JH378197 35751 61 + 8899380 cattgcactccagcctgggtaacaagagcgagactccatctcaaaaaaa--------------------aaaaaaaaaaaa- i saiBol1.JH378197 C 0 C 0 e canFam3.chr2 79141527 310 - 85426708 I e dasNov3.JH570393 1781444 0 - 2296528 C e otoGar3.GL873538 19679048 0 - 27850971 C e calJac3.chr18 46491489 0 - 47448759 C e chlSab2.chr12 3717843 347 - 108555830 I e macFas5.chr15 1462238 338 - 112612857 I e nomLeu3.chr8 79139935 240 + 117381234 M a score=21375.000000 s hg38.chr3_KI270784v1_alt 176705 6 + 184404 AAAAAC s panTro5.chr3 72231 6 - 202621043 AAAAAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 67152 6 - 205426864 aaaaac i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85619 6 + 508821 aaaaaC i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 54436 6 - 85730 aaaaaC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macNem1.NW_012020287v1 68081 6 + 4899514 aaaaaC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 67371 6 + 97742 aaaaaC i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 67193 6 + 85016 aaaaaC i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46491489 6 - 47448759 AAAAAG i calJac3.chr18 C 0 C 0 s otoGar3.GL873538 19679048 6 - 27850971 AAAAAG i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79141527 310 - 85426708 I e dasNov3.JH570393 1781444 0 - 2296528 C e saiBol1.JH378197 35812 0 + 8899380 C e chlSab2.chr12 3717843 347 - 108555830 I e macFas5.chr15 1462238 338 - 112612857 I e nomLeu3.chr8 79139935 240 + 117381234 M a score=385306.000000 s hg38.chr3_KI270784v1_alt 176711 108 + 184404 AGGAATAGAAAGGAAT-AGGACTGAACATCAGAGGTTGCTG-CATTTAGAAATAAAGTGGGTTCAGAGGAGCAGA-GGGAGCA-TT----TGGT--CTACTCGCAGTTGCTGCTGAG---T s panTro5.chr3 72237 108 - 202621043 AGGAATAGAAAGGAAT-AGGACTGAACATCAGAGGTTGCTG-CATTTAGAAATAAAGTGGGTTCAGAGGAGCAGA-GGGAGCA-TT----TGGT--CTACTCACAGTTGCTACTGAG---T i panTro5.chr3 C 0 C 0 s panPan2.chr3 67158 108 - 205426864 aGGAATAGAAAGGAAT-AGGACTGAACATCAGAGGTTGCTG-CATTTAGAAATAAAGTGGGTTCAGAGGAGCAGA-GGGAGCA-TT----TGGT--CTACTCACAGTTGCTACTGAG---T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85625 107 + 508821 AGGAATAGAAAGGGAT-AGGACTGAACATCAGAGGTTGCTG-CATTTAGAAACAAAGTGGGTTCAGAGGAGCAGA--GGAGCA-TT----TGGT--CTACTCGCAGTTGCTGCTGAG---T i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 54442 110 - 85730 AGGAATAGAAAGGGAT-AGGACTGAACATCAGAGGTTGCTG-CGTTTAGAAATAAAGTGGGGTCAGAGGAGCAGA-GGGATCA-TT----TGGTCACTACTCGCAGTTGCTACTGAG---T i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macNem1.NW_012020287v1 68087 110 + 4899514 AGGAATAGAAAGGGAT-AGGACTGAACATCAGAGGTTGCTG-CGTTTAGAAATAAAGTGGGGTCAGAGGAGCAGA-GGGATCA-TT----TGGTCACTACTCGCAGTTGCTACTGAG---T i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 67377 110 + 97742 AGGAATAGAAAGGGAT-AGGACTGAACATCAGAGGTTGCTG-TGTTTAGAAATAAAGTGGGGTCAGAGGAGCAGA-GGGATCA-TT----TAGTCACTACTCGCAGTTGCTACTGAG---T i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 67199 110 + 85016 AGGAATAGAAAGGGAT-AGGACTGAACATCAGAGGTTGCTG-TGTTTAGAAATAAAGTGGGGTCAGAGGAGCAGA-GGGATCA-TT----TAGTCACTACTCGCAGTTGCTACTGAG---T i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46491495 113 - 47448759 AGGAATAGAAAGAAAT-AGAACTGAACTTCAGAGGTTTCTG-CATTTAGAAATGAAGTGGAGTCAGAGGAGCAGA-CAGAGCA-TGGTCACTGTCACTGCTCGCAGTTG-TGCTGAG---T i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 35812 64 + 8899380 ------------------------------------------------gaaaTGAAGTGGGGTCAGAGGAGCAGA-GGGTGCA-TT----TGGTCACTGCTCGAAGTTGCTGCTGAG---T i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19679054 111 - 27850971 AAGAATAGTGAAGGAC-AGTACTAAGTATCAGGGGGTGCTA-CTTT---AAATGCAGTGGGGTCAGAGAACCAGA-GGAGTAAGTT----TTGTTGGTGCTAGCAGTTGGTGTTGAGAACT i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1781444 109 - 2296528 AGGAGTGGAAAGGGCCAAGGACTAAACACCAG-TATTACTGTCATTTAGAAAT-AAGTGAGGTTAGGGGAAGAGAAGGGAGGG-CG----TGGTCACTGTTAAAAG--GCTGAGAAG---T i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79141527 310 - 85426708 I e chlSab2.chr12 3717843 347 - 108555830 I e macFas5.chr15 1462238 338 - 112612857 I e nomLeu3.chr8 79139935 240 + 117381234 M a score=69110.000000 s hg38.chr3_KI270784v1_alt 176819 12 + 184404 AAAGCAGGATAA s panTro5.chr3 72345 12 - 202621043 AAAGCAGGATAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 67266 12 - 205426864 AAAGCAGGATAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85732 12 + 508821 AAAGCAGGATAA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 54552 12 - 85730 AAAGCAGGATAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macNem1.NW_012020287v1 68197 12 + 4899514 AAAGCAGGATAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 67487 12 + 97742 AAAGCAGGATAA i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 67309 12 + 85016 AAAGCAGGATAA i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46491608 12 - 47448759 AAAGCAGGATAA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 35876 12 + 8899380 AAAGCAGGATAA i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19679165 12 - 27850971 AAAGCAGATTAA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79141837 12 - 85426708 aaattaaaagaa i canFam3.chr2 I 310 C 0 s dasNov3.JH570393 1781553 12 - 2296528 AGAGAAGGGTAA i dasNov3.JH570393 C 0 I 671 e chlSab2.chr12 3717843 347 - 108555830 I e macFas5.chr15 1462238 338 - 112612857 I e nomLeu3.chr8 79139935 240 + 117381234 M a score=130424.000000 s hg38.chr3_KI270784v1_alt 176831 38 + 184404 AGT-------------CCTTCATGACCCTTGCACTTTTTT--ATTGGAATTAT---- s panTro5.chr3 72357 38 - 202621043 AGT-------------CCTTCATGACCCTTGCACTTTTTT--ATTGGAATTAT---- i panTro5.chr3 C 0 C 0 s panPan2.chr3 67278 38 - 205426864 AGT-------------CCTTCATGACCCTTGCACTTTTTT--ATTGGAATTAT---- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85744 38 + 508821 AGT-------------CCTTCATGACCCTTGCACTTTTTT--ATTGGAATTAT---- i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 54564 38 - 85730 AGT-------------CCTTCGTGACCCTTGGACTTTTTT--ATTGGAATTAT---- i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macNem1.NW_012020287v1 68209 38 + 4899514 AGT-------------CCTTCGTGACCCTTGGACTTTTTT--ATTGGAATTAT---- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 67499 38 + 97742 AGT-------------CCTTCGTGACCCTTGGACTTTTTT--ATTGGAATTAT---- i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 67321 38 + 85016 AGT-------------CCTTCGTGACCCTTGGACTTTTTT--ATTGGAATTAT---- i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46491620 39 - 47448759 AGT-------------ACTTCATGACCCTTGGACTTTTTTTAATTGGAATTA----- i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 35888 37 + 8899380 AGA-------------ATTTCATGACCCTGGGACTTCTTT--ATTGGAATTA----- i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19679177 47 - 27850971 GGACTAAAGAATAGGGCCTTAATGGTGCTGAG----------ATTAGAATTCTGGGA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79141849 42 - 85426708 gat-------------ccttgatggccctcaagatttttt--agtggaattccagga i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1781565 671 - 2296528 I e chlSab2.chr12 3717843 347 - 108555830 I e macFas5.chr15 1462238 338 - 112612857 I e nomLeu3.chr8 79139935 240 + 117381234 M a score=138515.000000 s hg38.chr3_KI270784v1_alt 176869 25 + 184404 TTAAAAATCAGATTGCGGTATAAAA s panTro5.chr3 72395 25 - 202621043 TTAAAAATCAGATTGCGGTATAAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 67316 25 - 205426864 TTAAAAATCAGATTGCGGTATAAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85782 25 + 508821 TTAAAAATCAGATTGCGGTATAAAA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 54602 25 - 85730 TTAAAAATCAGATTTTGGTATAAAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macNem1.NW_012020287v1 68247 25 + 4899514 TTAAAAATCAGATTTTGGTATAAAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 67537 25 + 97742 TTAAAAATCAGATTTTGGTATAAAA i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 67359 25 + 85016 TTAAAAATCAGATTTTGGTATAAAA i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46491659 25 - 47448759 TTAAAAATCAGATTTCAGTATTAAA i calJac3.chr18 C 0 I 1 s saiBol1.JH378197 35925 25 + 8899380 TTACAAATCAGATTTCAGTTTAAAA i saiBol1.JH378197 C 0 I 1 s otoGar3.GL873538 19679224 25 - 27850971 TTGAAAATAAGATTTTAGTATAAAA i otoGar3.GL873538 C 0 I 1 s canFam3.chr2 79141891 25 - 85426708 ttgaaagccagattttagtgtaaaa i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1782236 25 - 2296528 TTGAAAATGAGTTTTTAGTGTAAAA i dasNov3.JH570393 I 671 C 0 e chlSab2.chr12 3717843 347 - 108555830 I e macFas5.chr15 1462238 338 - 112612857 I e nomLeu3.chr8 79139935 240 + 117381234 M a score=16669.000000 s hg38.chr3_KI270784v1_alt 176894 8 + 184404 AACACAAT s panTro5.chr3 72420 8 - 202621043 AACACAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 67341 8 - 205426864 AACACAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85807 8 + 508821 AACACAAT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 54627 6 - 85730 --AACAGT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1462576 8 - 112612857 AGTACAAA i macFas5.chr15 I 338 C 0 s macNem1.NW_012020287v1 68272 6 + 4899514 --AACAGT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 67562 6 + 97742 --AACAGT i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 67384 6 + 85016 --AACAGT i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46491685 8 - 47448759 AACCAAAT i calJac3.chr18 I 1 C 0 s saiBol1.JH378197 35951 8 + 8899380 AACACAAT i saiBol1.JH378197 I 1 C 0 s otoGar3.GL873538 19679250 8 - 27850971 AAGACAAT i otoGar3.GL873538 I 1 C 0 s canFam3.chr2 79141916 8 - 85426708 gaagcaat i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1782261 5 - 2296528 --GAGAA- i dasNov3.JH570393 C 0 C 0 e chlSab2.chr12 3717843 347 - 108555830 I e nomLeu3.chr8 79139935 240 + 117381234 M a score=577312.000000 s hg38.chr3_KI270784v1_alt 176902 83 + 184404 AAGTGATGAAA-AA-TAGATCTCTGGATGAGACCAT-------GTGTCA-------TAG--------AGTCCAATGGAAGGGGAGAAGCAGGATAATAGAAAAT-CTA s panTro5.chr3 72428 83 - 202621043 AAGTGATGAAA-AA-TAGATCTCTGGATGAGACCAT-------GTGTCA-------TAG--------AGTCCAATGGAAGGGGAGAAGCAGGATAATAGAAAAT-CTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 67349 83 - 205426864 AAGTGATGAAA-AA-TAGATCTCTGGATGAGACCAT-------GTGTCA-------TAG--------AGTCCAATGGAAGGGGAGAAGCAGGATAATAGAAAAT-CTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85815 82 + 508821 AAGTGATGAAA-AA-TAGATCTC-GGATGAGACCAT-------GTGTCA-------TAG--------AGTCCAGTGGAAGGGGAGAAGCAGGATAATAGAAAAT-CTA i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 54633 83 - 85730 AAGTGATGAAA-AA-TAGATCTTTGGATGAGACCAT-------GTGTCA-------CAG--------AGTCCAATGGAAGGAAAGAAACAGGATAATAGAAAAT-CTA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1462584 83 - 112612857 AAGTGATGAAA-AA-TAGATCTCTGGATGAGACCAT-------GTGTCA-------TAG--------AGTCCAATGGAAGGGGAGAAACAGGATAATAGAAAAG-CCA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 68278 83 + 4899514 AAGTGATGAAA-AA-TAGATCTCTGGATGAGACCAT-------GTGTCA-------CAG--------AGTCCAATGGAAGGAAAGAAACAGGATAATAGAAAAT-CTA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 67568 83 + 97742 AAGTGATGAAA-AA-TAGATCTCTGGATGAGACCAT-------GTGTCA-------CAG--------AGTCCAATGGAAGGAAAGAAACAGGATAATAGAAAAT-CTA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3718190 83 - 108555830 AAGTGATGAAG-AG-TAGATCTCTGGATGAGACCAT-------GTGTCA-------TAG--------AATCCAATGGAAGGGGAGAAACAGGATAATAGAAAAG-CCA i chlSab2.chr12 I 347 C 0 s manLeu1.NW_012101680v1 67390 83 + 85016 AAGTGATGAAA-AA-TAGATCTCTGGATGAGACCAT-------GTGTCA-------CAG--------AGTCCAATGGAAGGAAAGAAACAGGATAATAGAAAAT-CTA i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46491693 82 - 47448759 AAGTGATGGAA-AA--AGATCTCTGGATGAGACCAT-------GTGTCA-------TAG--------AGTCCAATGGAAGGGGAGAAATAGGATAATATTAAAG-CCA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 35959 82 + 8899380 AAGTGATGAAA-AA-TAGATCTCTGGATGAGACCAC-------GTGTCA-------AAG--------AGTCCAGTGGAAGGGGAGAAACAGGGTAATA-GAAAA-CCA i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19679258 91 - 27850971 AAGTGATGAAA-AAATAGATTTCTGGATGCGACCATTATTAAAGAATAT-------TAG--------AATCCAGTGGAAGAGACGAAACAGGTTGACAGAAAAG-CCA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79141924 86 - 85426708 ------gaaaa-ga-tgaatCTGTGGCTGAGATGAC-------ACATTA-------AAGAATGTTCAAGTCCAGTGAAAGGGGAAAAGCAAGATGATAAAAAATGCCA i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1782266 92 - 2296528 CAATGATGAAAGGA-TGGCTCTGTGGATGAGACCAT-------GCGTTAAGAATACTAA--------AGTTCAATGGATGAGGAGAAACAGGATGATAGAAAAGGCCA i dasNov3.JH570393 C 0 C 0 e nomLeu3.chr8 79139935 240 + 117381234 M a score=3809192.000000 s hg38.chr3_KI270784v1_alt 176985 560 + 184404 CAAAAAGTAGACAAAAG---TTATGTTTTT----ATTATAG-AAAA-----AAT---CTTTATTTAAAGAGA-AA--TGATTAAGAGAAAGGGAAAAAACTGAAATCT--------ATGGGTG-AATACTAACAGAGAA------TATTT-AGATCAGCCTGAAGACAGATGAGGATCAAAAATGTAATGGGAAC-TAGAT---AAGAGTTTTCTA------AAAATCATCTTAGTAAGATGTAATTTAACAAAACTTGGAATATCTTTAACTATTAATGACAATGTTTCTAAAGCATCTTT-AAAAACTAAAATGTAAA-----------TATAACTACTCTTTTT------T----TTTT-TTTTACTAA----CCCTTAGTATT-TTATGTGTAAAAACCCCCAC-TTTTAACCCTCATTTTTGGCAGCT-TAAATTTCAGAAAAGATAATGATGAAAGTAT-AAATCA-TTTTT--AGCTGTTTTAAGAAAAGTGTCTA-TT--TTTGAAATCTGTCCTTATTGGCGTCAGG-TTTATAAA-----------ATGTGCTTTATACACCTGCCTAAATACATATTATTCATCAACTTATGAGAAATAACATTTTTAAGATAGAACAGGGTCTCTAGATTTT---ACAAAAATAA s panTro5.chr3 72511 559 - 202621043 CAAAAAGTAGACAAAAG---TTATGTTTTT----ATTATAG-AAAA-----AAT---CTTTATTTAAAGAGA-AA--TGATTAAGAGAAAGGGAAAAAACTGAAATCT--------ATGGGTG-AATACTAACAGAGAA------TATTT-AGATCAGCCTGAAGACAGATGAGGATAAAACATGTAATGGGAAC-TAGAT---AAGAGTTTTCTA------AAAATCATCTTAGTAAGATGTAATTTAACAAAACTTGGAATATCTTTAACTATTAATGACAATGTTTCTAAAGCATCTTT-AAAAACTAAAATGTAAA-----------TATAACTACTC-TTTT------T----TTTT-TTTTACTAA----CCCTTAGTATT-TTATGTGTAAAAACCCCCAC-TTTTAACCCTCATTTTTGGCAGCT-TAAATTTCAGAAAAGATAATGATGAAAGTAT-AAATCA-TTTTT--AGCTGTTTTAAGAAAAGCGTCTA-TT--TTTGAAATCTGTCCTTATTGGCATCAGG-TTTATAAA-----------ATGTGCTTTATACACCTGCCTAAATACATATTATTCATCAACTTATGAGAAATAACATTTTTAAGATAGAACAGGGTCTCTAGATTTT---ACAAAAATAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 67432 557 - 205426864 CAAAAAGTAGACAAAAG---TTATGTTTTT----ATTATAG-AAAA-----AAT---CTTTATTTAAAGAGA-AA--TGATTAAGAGAAAGGGAAAAAACTGAAATCT--------ATGGGTG-AATACTAACAGAGAA------TATTT-AGATCAGCCTGAAGACAGATGAGGATAAAAAATGTAATGGGAAC-TAGAT---AAGAGTTTTCTA------AAAATCATCTTAGTAAGATGTAATTTAACAAAACTTGGAATATCTTTAACTATTAATGACAATGTTTCTAAAGCATCTTT-AAAAACTAAAATGTAAA-----------TATAACTACTC---TT------T----TTTT-TTTTACTAA----CCCTTAGTATT-TTATGTGTAAAAACCCCCAC-TTTTAACCCTCATTTTTGGCAGCT-TAAATTTCAGAAAAGATAATGATGAAAGTAT-AAATCA-TTTTT--AGCTGTTTTAAGAAAAGCGTCTA-TT--TTTGAAATCTGTCCTTATTGGCATCAGG-TTTATAAA-----------ATGTGCTTTATACACCTGCCTAAATACATATTATTCATCAACTTATGAGAAATAACATTTTTAAGATAGAACAGGGTCTCTAGATTTT---ACAAAAATAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 85897 565 + 508821 CAAAAAGTAGACAAAAG---TTATGTTTTTG---GTTATAGAAAAA-----AAT---CTTTATTT-AAGAGA-AA--TGATTAAGAGAAAGGGAAAAAACTGAAATCT--------ATGGGTG-AATACTAACAGAGAA------TATGT-AGATCAGCCTGAAGACAGATGAGGATCAAAAATGTAATGGGAACTTAGAT---AAGAGTTTTCTA------AAAATCATCTTAGTAAGATGTAATTTAACAAAACTTGGAATATCTTTAACTATTAATGACAATGTTTCTAAAGCATCTTTAAAAAACTAAAATGTAAA-----------TATAACTACTCTTTTT------T----TTTT-TTTTTCTAA----CCCTTAGTA-T-TTATGTGTAAAAACCCCCAC-TTTTAACCCTCATTTTTGGCAGCTATTAAATTCAGAAAAGATAATGAT-AAAGTAT-AAATCATTTTTT--AGCTGTTCTAAGAAAAGTGTCTATTT--TTTGAAATCTGTCCTTATTGGCATCAGGTTTTATAAA-----------ATGTGCTTTATACACCTGCCTAAATACATATTGTTCATCAACTTATGAGAAATAGCATTTTTAAGATAGAACAGGGTCTCTAGATTTT---ACAAAAATAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79140180 563 + 117381234 CAAAAAATAGACAAAAGTTATTATTTGTTT----ATTATAG-AAAA-----AATAAACTTTGTTTAAAGAGA-GA--TGGTTAAGAGACAGGG-AAAAACTGAAACCT--------ACAGGTG-AATACTTAAAGAGAATGACAGTATTT-AGCTCAGCCTGAAGATAGATGAGGATCAAAAATGTAATGGGAAC-TAGAT---AAGAGTTTTCTA------AAAATCATCTTAGTAAGATGTAATTT-----AACTTGGAATATCTTAAACTATTAATGACAATGTTTCTAGAGCATCTTT-AAAAACTCAAATGTAAA-----------TATAACTACTC--TTA------A----TTTA-TCTTACTAA----CCCTTAGTATT-TTATGTGTAAAAATTCTCGT-TTTTAACAAACATTTTTGGCAGTT-TAAATTTCAGAAAAGATAATGATGAAAGTGT-GAATCT-TTTTT--AGCTGTTTTAAGAAAA-TGACTA-GT--TTTGAAATCTGTCATTATTGGCATCAGG-TTTATAAA-----------ATGCACTTTATACAACTGCCTAAATACATATTATTCATCAACTTATGAGAAATAATATTTTTAAGATAGAAGAGGGTCTCTAGATTTT---ACAAAAATAA i nomLeu3.chr8 M 240 C 0 s rheMac8.chrUn_NW_014858614v1 54716 559 - 85730 CAAAAAGTAGACAAAAG---TTATGTTTTT----ATTATAGAAGAA-----AAA---CTTTATTTAAAGAGA-AA--TGATTAAGAGAAAGGG-AAAAACTGAAACCT--------GTGGGTG-AATACTAACAGAGAATGAGAATATTT-AGATCAGCCTGAAGACAGACGAGGATAAAAAATATAATGGGAAC-TAGAT---AAGAGTTTTCTA------AAAATCATCTTAGTAAGATGTAATTTAACAAAACTTGGAATATCTTAAACTATTAATGACAATGTTTCTAAAGCATCTTT-AAAAACTCAAATGTAAA-----------TATAACTACCC---TT------A----AGTT-TTTTACTAA----TCCTTAGTATC-TTATGTGTAAACACCCTCA--TTTTAACAAACATTTTTAGCAGTT-TAAATTTCAGGAAAG---ATGATGAAAGTAT-GAATCA-TTTTT--AGCTGTTTTACAAAAAGTGGCTA-TT--TTTGAAATCTGTCCTTATTGGCATCAGG-TTTACAAA-----------ATGTACTTTATACACCTGCCTAAATACATATTACTCATCAACTTATGAGAAATAACATTTTTAAGACAGAAGAGGGTCTCTAGATTTT---ACAAAAATAA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1462667 556 - 112612857 CAAAAAGTAGACAAAAGTTATTATTTGTTT----ATTATAGAAAAA---ATAAA---CTTCGTTTGAAGAGA-AA--TGGTTAAAAG--------ACACCTTAAACCT--------ACAGGTG-AATACGTACAGAGAATGACAGTACTT-AGCTCAGCCTGAAGATAGATGAGGATCAAAAATGTAATGGGAAC-TAGAT---AAGAGTTTTCTA------AAAATCATCTTAATAAGATGTAATTT-----AACTTGGAATACCTTAAACTATTAATGACAATGTTTCTAGAGCATCTTT-AAAAACTAAAATGTAAA-----------TATAAGTACTC---TT------A----ATTTATTTCACTAA----CCCTTAGTATT-TCATGTGCAAAAACTCTCAT-TTTTAACAAACATTTTTGGTAATT-TAAACTTCAGAAAAGATAATGATGGAAGTGT-GAATCA-TTTTT--AGCTGTTTTA-AGAAAATGGCTA-GT--TTTGAAATCTGTCCTTCTTGGCATCAGG-TTTATAAA-----------ATGCATTTTATACACCTGCCTAAATACATATTACTCATCAACTTATGAGAAATAATATTTTTAAGATAGAAGAAGGTCTCTAGATTTT---ATAAAAATAA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 68361 559 + 4899514 CAAAAAGTAGACAAAAG---TTATGTTTTT----ATTATAGAAGAA-----AAA---CTTTATTTAAAGAGA-AA--TGATTAAGAGAAAGGG-AAAAACTGAAACCT--------GTGGGTG-AATACTAACAGAGAATGAGAATATTT-AGATCAGCCTGAAGACAGACGAGGATAAAAAATATAATGGGAAC-TAGAT---AAGAGTTTTCTA------AAAATCATCTTAGTAAGATGTAATTTAACAAAACTTGGAATATCTTAAACTATTAATGACAATGTTTCTAAAGCATCTTT-AAAAACTCAAATGTAAA-----------TATAACTACCC---TT------A----AGTT-TTTTACTAA----TCCTTAGTATC-TTATGTGTAAACACCCTCA--TTTTAACAAACATTTTTAGCAGTT-TAAATTTCAGGAAAG---ATGATGAAAGTAT-GAATCA-TTTTT--AGCTGTTTTACAAAAAGTGGCTA-TT--TTTGAAATCTGTCCTTATTGGCATCAGG-TTTACAAA-----------ATGTACTTTATACACCTGCCTAAATACATATTACTCATCAACTTATGAGAAATAACATTTTTAAGACAGAAGAGGGTCTCTAGATTTT---ACAAAAATAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 67651 561 + 97742 CAAAAAGTAGACAAAAG---TTATGTTTTT----ATTATAGAAGAA-----AAA---CTTTATTTAAAGAGA-AA--TGATTAAGAGAAAGGG-AAAAACTGAAACCT--------GTGGGTG-AATACTAACAGAGAATGAGAATATTT-AGATCAGCCTGAAGACAGACGAGGATAAAAAATATAATGGGAAC-TAGATAAGAAGAGTTTTCTA------AAAATCATCTTAGTAAGATGTAATTTAACAAAACTTGGAATATCTTAAA-TATTAATGACAATGTTTCTAAAGCATCTGT-AAAAACTCAAATGTAAA-----------TATAACTACCC---TT------A----AATT-TTTTACTAA----TCCTTAGTATC-TTATGTGTAAACACCCTCA--TTTTAACAAACATTTTTAGCAGTT-TCAATTTCAGGAAAG---ATGATGAAAGTAT-GAATCA-TTTTT--AGCAGTATTAAGAAAAATTACTA-TT--TTTGAAATCTGCCCTTCCTGGCATCGGG-TTTATAAA-----------ATGCACTTTATACACCTGCCTAAATACATATTACTCATCAACTTACGAGAAATAACATTTTTAAGATAGAAGAGGGTCTCTAGATTTT---ACAAAAATAA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3718273 564 - 108555830 CAAAAACTAAACAAAAGTTATTATTTGTTT----ATTGTAGAAAAA---ATAAA---CTTTGTTTAAAGAGA-AA--TGGTAAAGAGACATGG-AAAGACTAAAACCT--------ACAGGTG-AATACTTACAGAGAATGACAGTATTT-AGCTCAGCCTGAAGATAGATGAGGATCAAAAATG-AATGGGAAC-TAG----TAAGAGTTTTCTA------AAAATCATCTTAATAAGATGTAATTT-----AACTTGGAATATCTTAAACTATTAATGACAATGTTTCTAGAGCATCTTT-AAAAACTAAAATGTAAA-----------TATAGCTACCT---TT------ATTTTTTTT-TTTTACTAA----CCCTTAGTATT-TTATGTGTAAAAATTCTCAT-TTTTAACAAACATTTTTGGCAGTT-TAAATTTCAGAAAAGATAATGATGAAAGTGT-GAATCA-ATTTT--AGCTGTTTTA-AGAAAATGACTA-TT--TTTGAAATCTGTCCTTATTGGCATCAGG-TTTATAAA-----------ATGCACTTTATATACCTGCCTAAATACATATTATTCGTCAACTTATGAGAAATAATATTTTTAAGATAGAAGAGGGGCTCTAGATTTT---GCAAAAATAA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 67473 557 + 85016 CAAAAAGTAGACAAAAG---TTATGTTTTT----ATTATAGAAGAA-----AAA---C----TTTAAAAAGA-AA--TGATTAAGAGAAAGGG-AAAAACTGAAACCT--------GTGGGTG-AATACTAACAGAGAATGAGAATATTT-ATATCAGCCTGAAGACAGACGAGGATAAAAAATATAATGGGAAC-TAGATAAGAAGAGTTTTCTA------AAAATCATCTTAGTAAGATGTAATTTAACAAAACTTGGAATATCTTAAA-TATTAATGACAATGTTTCTAAAGCATCTTT-AAAAACTCAAATGTAAA-----------TATAACTACCC---TT------A----AAGT-TTTTACTAA----TCCTTAGTATC-TTATGTGTAAACACCCTCA--TTTTAACAAACATTTTTAGCAGTT-TAAATTTCAGGAAAG---ATGATGAAAGTAT-GAATCA-TTTTT--AGCTGTTTTACAAAAAGTGGCTA-TT--TTTGAAATCTGTCCTTATTGGCATCAGG-TTTACAAA-----------ATGTACTTTATACACCTGCCTAAATACATATTACTCATCAACTTACGAGAAATAACATTTTTAAGATAGAAGAGGGTCTCTAGATTTT---ACAAAAATAA i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46491775 565 - 47448759 CAATAAGTAGACAAAAG---TTATGTTTTTGTTTATTATAG-AGAA-----AAA---CTTTATTTAAAGAGA-AG--TGGTTAAGAGAAAGGG-AAAAACTGAAACCC--------ATGGGTG-AATACTTAGAGAGAATGAGAGTATTT-AGCTCAGCCTGAGGACAGATGAGAATCAAAAATACCGTGGGAAC-TAGAT---AAGAGTTTTCTAAGTAAGTAAATCATCTGAGTAAGATGTAA-ACAACAAAACTTGGAGTATCTTAAACCATTAATGACGATGTTTCTAGAGCATCTTT-AAAAACTAAAAGGTAAA-----------TATGACTACTC---TT----ATT----TTTT-TCTTACTAA----CGCTTAGTA-T-TAATATGTAAAACCCCTCAT-TTTTAGCAAACATTTTTGGCAGTT-TAAGTTTCAGAAAAGAAAATGATGAAAGTAT-GAATCA-TTTTT--ATCTGTTTTAAGAA----ACCTA-TT--TTTGAAATCTGTCCTTATTGGCGTGAGG-TTTAAAAA-----------ATGCCCTTTATACACGTGCCTAAATGCATATTATTCATCAACTTACAAGAAATAATATTTTTTATCT---CTAGTGTCTCTAGatttt---ataaaaataa i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 36041 571 + 8899380 CAAAAAGTAGACAAAAG---TTATGTTTTTGTTTGCTGTAG-AAAAAA-ATAAA---CTTTATTTAAGTAGA-AA--TGGTTAAGAGAA--GG-AAAAACTGAAACCC--------ATGGGTG-AATACTTACAGTGAATGAGAGTGTTT-AGCTCAGCCTGAAGACAGATGAGGATCAAAAATATAATGGGAAG-TAGTT---AAGAGTTTTCTA------TAAATAATCTTAGTAAGATGTAGTTTAACAAAAC-TGGATTATCTTAAACTATTAATGACAATGTTTCTAGAGCGTCTTT-AACAACTAAAATGTAAA-----------TATAGTTACCT---TT---AATT----TTTT-TTTTACTAA----CCCTTAGTATT-TTATGTGTAAAA-CCTTCAT-TTTTAACAAACAATTTCTGCACTT-TAAATTTCAGAAAAGATCGTGATGAAAGTAT-TAATCA-TTTTTAAAGCTGTTTTAAGAAGAGTGACTA-TT--ATAGAAATCTGTCCTTATTTGCATCAGG-TTTATAAA-----------ATGCACTTTATACACCTGCCTAAATACATATTACTCATCAGCGTATGAGAAATAGTATTTTTGAGATAAAAGAGTATCTCTAGAGTTT---ACAAAAATAA i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19679349 529 - 27850971 CAAGAATTAGGGAAAAG---TTTTATTTTTATTTTTTATAG-GGAAGACTAAAA---CTTTA--TAGAGACA-AA--TGATCATTAGGATAGG-AAAAATCGAAGCCC--------GTAGA------------AAAGAATGAGAGTATTTAAGCTCATCCTGAAGTCAGGTGATAATCAAAAATATTATGGGGAC-CAGAC---GGTAGTTTTCTA------AAAATTATCTTAGGAAGTTATGATTTAACAAAATCTGGAATATTTTGAACTGTTGCTGATAGTGTGTCTAGGGTGTCT---AA----------------------------------------CT------A----CTCT-TTTTACAAAATTTTCATTGGTATT-TTATGTATAAAAATCACTA--CTTTTTCAAATAAATTGAGATTTT-TAAATTCCAGAAAAGACAATGATGAAAGTAT-GAATCA-TTTTG--AGCA--TTTAAGACATG---CTA-TTGATTTGAAATCTGTTCTTATT-GCATAAGT-GCAATAAA-----------TTGTATTTTATAAACGTGTCTTAACATGTATTTTTCATGTATTGAT--GAAATAATATTTTTAAGAAAGGAC--TATCTCTAGATTTTTAAACATAAATAA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79142010 573 - 85426708 CAAGAGTAAGAAAACAT---TTTTATAT------AATATTG-GGAAGACTTAAA---TTTTATTTAAAGAGA-AAAGTGGTTAATGGAAAAAA-AGAAATTGAAATTTTGCAGAGAATGTTTGAAATGCTTCCAGAGAATGAGAGTATCC----------TAAAGTTAGATGATCTTCAAAATTATAATGGGTAC-TGCAT---GGGAATTTTTCA------GATATTATCTTAATAAGGTATGATCTCACAAAACCAAGAGTATCTTAAGATATTGATGAAAATGTTTCTAGGGCATCTTT-AGAAACTAAAATATAAG-----------TATAACCACTT---TA------A----TTTT-TTTCATTAA----TACTTAGTATTAATATGGATAAAAACCTCTGTATTTCATGAGTAAATTTTGGCAATT-TAAATTCTAGGAAAAA--ATGATGAAAATATAGAATCA-GTTTA--AGCTGTTTTAAGAAATGTCCTTA-TT--TTTGAAATCTGTTTTTATTGACATTTGG-TTCATAAACTATATTTTATATGTATTTTATAAACCTGTCTAAACACATATTACTCATGAATTCATGAGAAATAATATTTT----ATAAAAG-GAGTCTCTAGATTTT----TGAAACTAA i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1782358 576 - 2296528 CAAGAATCAGATAAAAG---TTATGCTTTTGCATATTACAGAAGACTGCTTAAA---C--TATTTAAAGAGAGAA--GGGTTAATAGAAAAAG-GGAAATTGAAACCT--------GTGGAAA-AATGCTTGCAGATAATGAGAGTATTT-ATCTGATCCTTAAGTCAGGTGAGGATCAAAAATGTAATGGGGAC-CACAT---GTAAATTTTCCA------AAGATTGTCTCAATGAGAGGTGATTGAACAAAACTTGGAATATTTAGAACTTTTGATGAAGGTGTTACTAGGGCATCTTT-AGGAACTAAAATGTAAAGATTCTCattttatatatattc---ttttttaca----attt-ttttattaa----taCTTTGTACT-TTACATGTAAAAACCTGT---TTTTAACAAA---TTTTGATGGCT-TAAACTTCAGAAAATATAATGATGAAAATATAAAATCA-ATTTA--AGCTGCTTTAAAAAAAGTCA-TA-TT--TTT-AAACCTGTCCTTATTGGTATAAGG-CTTATAAA-----------CTGCATTTTATAAACCCATCTAAACACATAGGAGTCACAGACTCATGaaaaataatattt-----aaaaaaataagtcacgatattt----aaaaaaataa i dasNov3.JH570393 C 0 C 0 a score=9555.000000 s hg38.chr3_KI270784v1_alt 177545 1 + 184404 T s panTro5.chr3 73070 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 67989 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 86462 1 + 508821 T i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79140743 1 + 117381234 T i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 55275 1 - 85730 T i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1463223 1 - 112612857 T i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 68920 1 + 4899514 T i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 68212 1 + 97742 T i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3718837 1 - 108555830 T i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 68030 1 + 85016 T i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46492340 1 - 47448759 t i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 36612 1 + 8899380 T i saiBol1.JH378197 C 0 C 0 s canFam3.chr2 79142583 1 - 85426708 T i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1782934 1 - 2296528 t i dasNov3.JH570393 C 0 C 0 e otoGar3.GL873538 19679878 0 - 27850971 C a score=33124.000000 s hg38.chr3_KI270784v1_alt 177546 4 + 184404 TTTA s panTro5.chr3 73071 4 - 202621043 TTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 67990 4 - 205426864 TTTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 86463 4 + 508821 TTTA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79140744 4 + 117381234 TTTA i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 55276 4 - 85730 TTTA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1463224 4 - 112612857 TTTA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 68921 4 + 4899514 TTTA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 68213 4 + 97742 TTTA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3718838 4 - 108555830 TTTA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 68031 4 + 85016 TTTA i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46492341 4 - 47448759 ttta i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 36613 4 + 8899380 TTTA i saiBol1.JH378197 C 0 C 0 s dasNov3.JH570393 1782935 4 - 2296528 ttta i dasNov3.JH570393 C 0 I 2 e canFam3.chr2 79142584 0 - 85426708 C e otoGar3.GL873538 19679878 0 - 27850971 C a score=25718.000000 s hg38.chr3_KI270784v1_alt 177550 8 + 184404 AACACttt s panTro5.chr3 73075 8 - 202621043 AACACttt i panTro5.chr3 C 0 C 0 s panPan2.chr3 67994 8 - 205426864 AACACttt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 86467 8 + 508821 AATACttt i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79140748 8 + 117381234 AACACTTT i nomLeu3.chr8 C 0 C 0 s macFas5.chr15 1463228 8 - 112612857 AACACTTT i macFas5.chr15 C 0 C 0 s chlSab2.chr12 3718842 8 - 108555830 AACCCTTT i chlSab2.chr12 C 0 C 0 s calJac3.chr18 46492345 8 - 47448759 aaCACTTT i calJac3.chr18 C 0 T 75972 s saiBol1.JH378197 36617 8 + 8899380 AACACCTT i saiBol1.JH378197 C 0 C 0 s dasNov3.JH570393 1782941 8 - 2296528 aaaaattt i dasNov3.JH570393 I 2 C 0 e canFam3.chr2 79142584 0 - 85426708 C e otoGar3.GL873538 19679878 0 - 27850971 C e cerAty1.NW_012005170v1 68217 0 + 97742 C e rheMac8.chrUn_NW_014858614v1 55280 0 - 85730 C e manLeu1.NW_012101680v1 68035 0 + 85016 C e macNem1.NW_012020287v1 68925 0 + 4899514 C a score=-1240.000000 s hg38.chr3_KI270784v1_alt 177558 1 + 184404 -c s panTro5.chr3 73083 1 - 202621043 -c i panTro5.chr3 C 0 C 0 s panPan2.chr3 68002 1 - 205426864 -c i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 86475 1 + 508821 -c i gorGor5.CYUI01015884v1 C 0 C 0 s chlSab2.chr12 3718850 1 - 108555830 G- i chlSab2.chr12 C 0 C 0 e canFam3.chr2 79142584 0 - 85426708 C e dasNov3.JH570393 1782949 0 - 2296528 C e otoGar3.GL873538 19679878 0 - 27850971 C e calJac3.chr18 46492353 75972 - 47448759 T e cerAty1.NW_012005170v1 68217 0 + 97742 C e saiBol1.JH378197 36625 0 + 8899380 C e rheMac8.chrUn_NW_014858614v1 55280 0 - 85730 C e manLeu1.NW_012101680v1 68035 0 + 85016 C e macNem1.NW_012020287v1 68925 0 + 4899514 C e macFas5.chr15 1463236 0 - 112612857 C e nomLeu3.chr8 79140756 0 + 117381234 C a score=326751.000000 s hg38.chr3_KI270784v1_alt 177559 632 + 184404 tttttttctttttttttttttttAAgaataaagtctggagtttagttaatagtaatgtaccaatgttaatttcaacaaatgtaccattgttatgtaaaatgttaacattagaggaaa-ccaggtgagggttatacaagaactctctgtactatctgcaacctagaataatctaaaactattgccaaataaaagcctttttt--aaatttttttgttattatactttaagttttagggtacatgtgcacaacgtgcaggtttgttacatatgtatacatgtgccatgttggtgtgctgtacccattaactcatcatttagcattagg-tatatctcctaatg-ctatccctcccccctcccccaccccacaacagtccccagagtgtgatgttccccttcctgtgtccatgtattctcattgttcaattccca-cctatgagtgagaacatgtggtgtttggttttttgttcttgcaatagtttgctgag-atgatggtttccagcttcatccatgtccctacaaaggacatgaactcatcac-tttttatggctacatagtattccatggtgtatatgtgccacattttcttaatccagtctgtcattgttggacatttgggttggttccaagtctttgc s panTro5.chr3 73084 632 - 202621043 ttttttttctttcttttttttttATgaataaagtctggagtttagttaatagtaatgtaccaatgttaatttcaacaaatgtaccattgttatgtaaaatgttaacattagaggaaa-ccaggtgagggttatacaagaactctctgtactatctgcaacctagaataatctaaaactattgccaaagaaaaggcttttta--aaatttttttattattatactttaagttttagggtacatgtgcacaacgtgcaggtttgttacatatgtatacatgtgccatgttggtgtgctgcacccattaactcatcatttagcattagg-tatatctcccaatg-ctatccctcccccctcccccaccccacaacagtccccagagtgtgatgttccccttcctgtgtccatgtattctcattgttcaattccca-cctatgagtgagaacatgtggtgtttggttttttgttcttgcgatagtttgctgag-atgatggtttccagcttcatccatgtccctacaaaggacatgaactcatcac-tttttatggctacatagtattccatggtgtatatgtgccacattttcttaatccagtctgtcattgttggacatttgggttggttccaagtctttgc i panTro5.chr3 C 0 C 0 s panPan2.chr3 68003 628 - 205426864 tttttttc----tttttttttttATgaataaagtctggagtttagttaatagtaatgtaccaatgttaatttcaacaaatgtaccattgttatgtaaaatgttaacattagaggaaa-ccaggtgagggttatacaagaactctctgtactatctgcaacctagaataatctaaaactattgccaaagaaaaggctttttt--aaatttttttattattatactttaagttttagggtacatgtgcacaacgtgcaggtttgttacatatgtatacatgtgccatgttggtgtgctgcacccattaactcatcatttagcattagg-tatatctcccaatg-ctatccctccccactcccccaccccacaacagtccccagagtgtgatgttccccttcctgtgtccatgtgttttcattgttcaattccca-cctatgagtgagaacatgtggtgtttggttttttgttcttgcgatagtttgctgag-atgatggtttccagcttcatccatgtccctacaaaggacatgaactcatcac-tttttatggctacatagtattccatggtgtatatgtgccacattttcttaatccagtctgtcattgttggacatttgggttggttccaagtctttgc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 86476 632 + 508821 tttttttt----tctttttttttccgaataaagtctggagtttagttaatagtaatgtaccaatgttaatttcaacaaatgtaccattgttacgtaaaatgttaacattagaggaaacccaggtgagggttatacaagaactctctgtactatctgcagcctagaataatctaaaactattgccaaataaaaggcttttttaaaaatttttttattatt-tactttaagttttagggtacatgtgcacgacgtgcaggttcgttacatatgtatacatgtgccatgttggtgtgctgtacccattaactcatcatttagcattaggttatatctcctaatgcctatccctcccccctcccccaccccacaacagtccccagagtgtgatgttcccctt-ctgtgtccatgtgttctcattgttcaatttccaccctatgagtgagaacatgcggtgtttggttttttg-tcttgcgatagtttgctgagaatgatggtttccagcttcatccatgtccctacaaaggacatgaactcatcacttttttatggctacatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgttggacatttgtgttggttccaagtc-ttgc i gorGor5.CYUI01015884v1 C 0 C 0 e canFam3.chr2 79142584 0 - 85426708 C e dasNov3.JH570393 1782949 0 - 2296528 C e otoGar3.GL873538 19679878 0 - 27850971 C e calJac3.chr18 46492353 75972 - 47448759 T e cerAty1.NW_012005170v1 68217 0 + 97742 C e saiBol1.JH378197 36625 0 + 8899380 C e rheMac8.chrUn_NW_014858614v1 55280 0 - 85730 C e manLeu1.NW_012101680v1 68035 0 + 85016 C e chlSab2.chr12 3718851 0 - 108555830 C e macNem1.NW_012020287v1 68925 0 + 4899514 C e macFas5.chr15 1463236 0 - 112612857 C e nomLeu3.chr8 79140756 0 + 117381234 C a score=6966.000000 s hg38.chr3_KI270784v1_alt 178191 12 + 184404 tactgtgaataA s panTro5.chr3 73716 12 - 202621043 tactgtgaataA i panTro5.chr3 C 0 C 0 s panPan2.chr3 68631 12 - 205426864 tactgtgaataA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87108 12 + 508821 tattgtgaataA i gorGor5.CYUI01015884v1 C 0 C 0 s calJac3.chr18 46416381 12 - 47448759 TACTTCAGACAT i calJac3.chr18 T 75972 C 0 e canFam3.chr2 79142584 0 - 85426708 C e dasNov3.JH570393 1782949 0 - 2296528 C e otoGar3.GL873538 19679878 0 - 27850971 C e cerAty1.NW_012005170v1 68217 0 + 97742 C e saiBol1.JH378197 36625 0 + 8899380 C e rheMac8.chrUn_NW_014858614v1 55280 0 - 85730 C e manLeu1.NW_012101680v1 68035 0 + 85016 C e chlSab2.chr12 3718851 0 - 108555830 C e macNem1.NW_012020287v1 68925 0 + 4899514 C e macFas5.chr15 1463236 0 - 112612857 C e nomLeu3.chr8 79140756 0 + 117381234 C a score=86499.000000 s hg38.chr3_KI270784v1_alt 178203 49 + 184404 GATATTAACTCAAAAAGTTTTCTTAATTC-TTCATTTTCTTCTTCAGGCT s panTro5.chr3 73728 49 - 202621043 GATATTAACTCAAAAAGTTTTCTTAATTC-TTCATTTTCTTCTTCAGGCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 68643 49 - 205426864 GATATTAACTCAAAAAGTTTTCTTAATTC-TTCATTTTCTTCTTCAGGCT i panPan2.chr3 C 0 M 233 s gorGor5.CYUI01015884v1 87120 49 + 508821 GATATTAACTCAAAAAGTTTTCTTAATTCTTTCATTTTCTTC-TCAGGCT i gorGor5.CYUI01015884v1 C 0 C 0 s macNem1.NW_012020287v1 4830524 49 - 4899514 GATATTAACTCAAAAAATTTTCTTAATTC-TTCATTTTCTTCTTCAGGCT i macNem1.NW_012020287v1 n 0 C 0 s manLeu1.NW_012101680v1 16916 49 - 85016 GATATTAACTCAAAAAATTTTCTTAATTC-TTCATTTTCTTCTTCAGGCT i manLeu1.NW_012101680v1 n 0 C 0 s calJac3.chr18 46416393 49 - 47448759 GATATTAACTCAGAAAGTTTTCTTAATTC-TTCCTTTTCTTCCTCAGGCT i calJac3.chr18 C 0 C 0 e canFam3.chr2 79142584 0 - 85426708 C e dasNov3.JH570393 1782949 0 - 2296528 C e otoGar3.GL873538 19679878 0 - 27850971 C e cerAty1.NW_012005170v1 68217 0 + 97742 C e saiBol1.JH378197 36625 0 + 8899380 C e rheMac8.chrUn_NW_014858614v1 55280 0 - 85730 C e chlSab2.chr12 3718851 0 - 108555830 C e macFas5.chr15 1463236 0 - 112612857 C e nomLeu3.chr8 79140756 0 + 117381234 C a score=11900.000000 s hg38.chr3_KI270784v1_alt 178252 9 + 184404 TGAAAAAGA s panTro5.chr3 73777 9 - 202621043 TGAAAAAGA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87169 9 + 508821 TGAAAAAGA i gorGor5.CYUI01015884v1 C 0 C 0 s macNem1.NW_012020287v1 4830573 9 - 4899514 TGAAAAAGA i macNem1.NW_012020287v1 C 0 C 0 s manLeu1.NW_012101680v1 16965 9 - 85016 TGAAAAAGA i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46416442 9 - 47448759 TGAAAAAAA i calJac3.chr18 C 0 I 75902 e canFam3.chr2 79142584 0 - 85426708 C e dasNov3.JH570393 1782949 0 - 2296528 C e otoGar3.GL873538 19679878 0 - 27850971 C e cerAty1.NW_012005170v1 68217 0 + 97742 C e saiBol1.JH378197 36625 0 + 8899380 C e rheMac8.chrUn_NW_014858614v1 55280 0 - 85730 C e chlSab2.chr12 3718851 0 - 108555830 C e macFas5.chr15 1463236 0 - 112612857 C e nomLeu3.chr8 79140756 0 + 117381234 C e panPan2.chr3 68692 233 - 205426864 M a score=6550.000000 s hg38.chr3_KI270784v1_alt 178261 7 + 184404 Aagtgtt s panTro5.chr3 73786 7 - 202621043 AAGTGTT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87178 7 + 508821 Aagtgtt i gorGor5.CYUI01015884v1 C 0 C 0 s macNem1.NW_012020287v1 4830582 7 - 4899514 AAGTGTT i macNem1.NW_012020287v1 C 0 n 0 s manLeu1.NW_012101680v1 16974 7 - 85016 AAGTGTT i manLeu1.NW_012101680v1 C 0 n 0 e canFam3.chr2 79142584 0 - 85426708 C e dasNov3.JH570393 1782949 0 - 2296528 C e otoGar3.GL873538 19679878 0 - 27850971 C e calJac3.chr18 46416451 75902 - 47448759 I e cerAty1.NW_012005170v1 68217 0 + 97742 C e saiBol1.JH378197 36625 0 + 8899380 C e rheMac8.chrUn_NW_014858614v1 55280 0 - 85730 C e chlSab2.chr12 3718851 0 - 108555830 C e macFas5.chr15 1463236 0 - 112612857 C e nomLeu3.chr8 79140756 0 + 117381234 C e panPan2.chr3 68692 233 - 205426864 M a score=5799.000000 s hg38.chr3_KI270784v1_alt 178268 22 + 184404 gcaataaacataggtgtgcatg s panTro5.chr3 73793 22 - 202621043 GGAATAAACATAGGTGTGCATG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87185 22 + 508821 gcaataaacataggtgtgcatg i gorGor5.CYUI01015884v1 C 0 C 0 e canFam3.chr2 79142584 0 - 85426708 C e dasNov3.JH570393 1782949 0 - 2296528 C e otoGar3.GL873538 19679878 0 - 27850971 C e calJac3.chr18 46416451 75902 - 47448759 I e cerAty1.NW_012005170v1 68217 0 + 97742 C e saiBol1.JH378197 36625 0 + 8899380 C e rheMac8.chrUn_NW_014858614v1 55280 0 - 85730 C e manLeu1.NW_012101680v1 16981 0 - 85016 I e chlSab2.chr12 3718851 0 - 108555830 C e macNem1.NW_012020287v1 4830589 0 - 4899514 I e macFas5.chr15 1463236 0 - 112612857 C e nomLeu3.chr8 79140756 0 + 117381234 C e panPan2.chr3 68692 233 - 205426864 M a score=3219.000000 s hg38.chr3_KI270784v1_alt 178290 8 + 184404 tttattgc s panTro5.chr3 73815 8 - 202621043 TTTATTGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87207 8 + 508821 tttattgc i gorGor5.CYUI01015884v1 C 0 C 0 s canFam3.chr2 79142584 8 - 85426708 TTTCTTGA i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1782949 0 - 2296528 C e otoGar3.GL873538 19679878 0 - 27850971 C e calJac3.chr18 46416451 75902 - 47448759 I e cerAty1.NW_012005170v1 68217 0 + 97742 C e saiBol1.JH378197 36625 0 + 8899380 C e rheMac8.chrUn_NW_014858614v1 55280 0 - 85730 C e manLeu1.NW_012101680v1 16981 0 - 85016 I e chlSab2.chr12 3718851 0 - 108555830 C e macNem1.NW_012020287v1 4830589 0 - 4899514 I e macFas5.chr15 1463236 0 - 112612857 C e nomLeu3.chr8 79140756 0 + 117381234 C e panPan2.chr3 68692 233 - 205426864 M a score=3976.000000 s hg38.chr3_KI270784v1_alt 178298 3 + 184404 -aac s panTro5.chr3 73823 3 - 202621043 -AAC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87215 3 + 508821 -aac i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 55280 3 - 85730 -AAC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macNem1.NW_012020287v1 68925 3 + 4899514 -AAC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 68217 3 + 97742 -AAC i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 68035 3 + 85016 -AAC i manLeu1.NW_012101680v1 C 0 C 0 s canFam3.chr2 79142592 3 - 85426708 AAA- i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1782949 0 - 2296528 C e otoGar3.GL873538 19679878 0 - 27850971 C e calJac3.chr18 46416451 75902 - 47448759 I e saiBol1.JH378197 36625 0 + 8899380 C e chlSab2.chr12 3718851 0 - 108555830 C e macFas5.chr15 1463236 0 - 112612857 C e nomLeu3.chr8 79140756 0 + 117381234 C e panPan2.chr3 68692 233 - 205426864 M a score=5033.000000 s hg38.chr3_KI270784v1_alt 178301 2 + 184404 aC s panTro5.chr3 73826 2 - 202621043 AC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87218 2 + 508821 aC i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 55283 2 - 85730 AC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macNem1.NW_012020287v1 68928 2 + 4899514 AC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 68220 2 + 97742 AC i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 68038 2 + 85016 AC i manLeu1.NW_012101680v1 C 0 C 0 s otoGar3.GL873538 19679878 2 - 27850971 AT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79142595 2 - 85426708 AT i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1782949 0 - 2296528 C e calJac3.chr18 46416451 75902 - 47448759 I e saiBol1.JH378197 36625 0 + 8899380 C e chlSab2.chr12 3718851 0 - 108555830 C e macFas5.chr15 1463236 0 - 112612857 C e nomLeu3.chr8 79140756 0 + 117381234 C e panPan2.chr3 68692 233 - 205426864 M a score=10172.000000 s hg38.chr3_KI270784v1_alt 178303 4 + 184404 TTTC s panTro5.chr3 73828 4 - 202621043 TTTC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87220 4 + 508821 TTTC i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 55285 4 - 85730 TTTC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macNem1.NW_012020287v1 68930 4 + 4899514 TTTC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 68222 4 + 97742 TTTC i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 68040 4 + 85016 TTTC i manLeu1.NW_012101680v1 C 0 C 0 s saiBol1.JH378197 36625 4 + 8899380 TTTT i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19679880 4 - 27850971 TTTT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79142597 3 - 85426708 TTT- i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1782949 0 - 2296528 C e calJac3.chr18 46416451 75902 - 47448759 I e chlSab2.chr12 3718851 0 - 108555830 C e macFas5.chr15 1463236 0 - 112612857 C e nomLeu3.chr8 79140756 0 + 117381234 C e panPan2.chr3 68692 233 - 205426864 M a score=4095.000000 s hg38.chr3_KI270784v1_alt 178307 1 + 184404 T s panTro5.chr3 73832 1 - 202621043 T i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87224 1 + 508821 T i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 55289 1 - 85730 T i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macNem1.NW_012020287v1 68934 1 + 4899514 T i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 68226 1 + 97742 T i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 68044 1 + 85016 T i manLeu1.NW_012101680v1 C 0 C 0 s saiBol1.JH378197 36629 1 + 8899380 T i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19679884 1 - 27850971 T i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1782949 1 - 2296528 t i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79142600 0 - 85426708 C e calJac3.chr18 46416451 75902 - 47448759 I e chlSab2.chr12 3718851 0 - 108555830 C e macFas5.chr15 1463236 0 - 112612857 C e nomLeu3.chr8 79140756 0 + 117381234 C e panPan2.chr3 68692 233 - 205426864 M a score=1026874.000000 s hg38.chr3_KI270784v1_alt 178308 152 + 184404 TTTTCAAGCCTGAAGAAGAAAATGAAGAATTAAGAAAAC-TTTTTTTGAGTTAATATCATCACTGGAGTATAATGT-GGATCAAATAAGGAAGAAAAATCATGAATTAGAGGAAGAGGCATCTGGGTATGGTTTTCATATTGTAGAACATTTTA s panTro5.chr3 73833 152 - 202621043 TTTTCAAGCCTGAAGAAGAAAATGAAGAATTAAGAAAAC-TTTTTTTGAGTTAATATCATCACTGGAGTATAATGT-GGATCAAATAAGGAAGAAAAATCATGAATTAGAGGAAGAGGCATCTGGGTATGGTTTTCATATTGTAGAACATTTTA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87225 153 + 508821 TTTTCAAACCTGAAGAAG-AAATGAAGAATTAAGAAAACTTTTTTTTGAGTTAATATCATCACTGGAGTATAATGTGGGATCAAATAAGGAAGAAAAATCATGAATTAGAGGAAGAGGCATCTGGGTATGGTTTTCATATTGTAGAACATTTTA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79140756 150 + 117381234 TTTTCAAGCCTGAAGAAAAACATGAAGAATTCAGAAAAC---TTTTTGAGTTAATATCATCACTGGACTATAATGT-GGATCAAATAAGAAAGAAAAATCATGAATTAGAAGAAGAGGCAACTGGGTATGGTTTTCATATTGTAGAACATTTTA i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 55290 147 - 85730 TTTTCAAGCCTGAAGAAGAAAATGAAGAATTAAGAAAAT---TTTTTGAGTTAGTATCATCACTGGAGTATAATGT-GGATCAAATAAGGAAGAAAAATCATGAATT---AGAAGAGGCAACTGGGTATGGTTTTCATATTATAGAACATTTTA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1463236 147 - 112612857 TTTTCAAGCCTGAAGGAAAACGTGAAGAATTCGGGAAAC---TTTTTGAGTTAAT---ATCACTGGAGTATAATGT-GGATCAAATAAGAAAGAAAAATCATGAATTAGAAGAAGAGACAACCGGGTATGGTTTTCATATTGAAGAACATTTTA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 68935 150 + 4899514 TTTTCAAGCCTGAAGAAGAAAATGAAGAATTAAGAAAAT---TTTTTGAGTTAATATCATCACTGGAGTATAATGT-GGATCAAATAAGGAAGAAAAATCATGAATTAGGAGAAGAGGCAACTGGGTATGGTTTTCATATTATAGAACATTTTA i macNem1.NW_012020287v1 C 0 M 5165 s cerAty1.NW_012005170v1 68227 150 + 97742 TTTTCAAGCCTGAAGAAGAAAATGAAGAATTAAGAAAAT---TTTGTGAGTTAATATCATCACTGGAGTATAATGT-GGATCAAATAAGGAAGAAAAATCATGAATTAGGAGAAGAGGCAACTGGGTATGGTTTTCATATTATAGAACATTTTA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3718851 150 - 108555830 TTTTCAAGCCTGAAGAAAAACATGAAGAATTCAGAAAAC---TTTTTGAGTTAATATCATCACTGGACTATAATGT-GGATCAAATAAGAGAGAAAAATAATAAATTAGAAGAAGAGACAACTGGGTATGGTTTTCATATTGTAGAACATTTTA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 68045 150 + 85016 TTTTCAAGCCTGAAGAAGAAAATGAAGAATTAAGAAAAT---TTTTTGAGTTAATATCATCACTGGAGTATAATGT-GGATCAAATAAGGAAGAAAAATCATGAATTAGGAGAAGAGGCAACTGGGTATGGTTTTCATATTATAGAACATTTTA i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46492353 146 - 47448759 TTTTCAAGCCCAAAGA---AAAGGAAGAATTAAGAAAAC---TTTTTGAGTTAATATCATCACTGGAGTATAATGT-GGATCAAATAAGAAAGAAAAATAACGAATTAGAAGAAGAGACAACTGGGTAAG-TTTCCCTACTGTAAAACATTTTA i calJac3.chr18 I 75902 C 0 s saiBol1.JH378197 36630 150 + 8899380 TTTTCAAGCCTGAAGGACTAAATGAAGAATTAAGAAAAC---TTTTTGAGTTAGTATCATCACTGGAGTATAATGT-GAATCAAATAAGAAAGAAAAATAATGAATTAGAAGAAGAGAGAACTGGGTATGCTTTTCCTATTGTAGAACATTTTA i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19679885 150 - 27850971 TCTCAAAGCATGAGGATGAAAAGGAACAATTAAAGAAAC---TTAGTGAGTTAAAACAATCTCTGGAATATAACTT-GAATCAAGAAATGAAGAAAAATGGTGAATTAGAAAAAGAAATATCTGGGTAAGATATTACTATTTCAGATCATTTTA i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79142600 150 - 85426708 TTTCAAAGCCTAGCGATGAAAAGGAAAGTCTAAAGAAAT---GTATGGAGTTAAAACAATCTCTGGAATTCAGTTT-GGATCAAGAGGTGAAGAAAAATTATGAATTAGAAAAAGAGAATACTGGGTAAGACTATAATATTTCACACCACTTTA i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1782950 150 - 2296528 tttCCAAGTCTGAGGAAGAAAAAGAACAATTAAAGAAAC---TTACGGAGTTAAAACAATCTTTGGAATATAGTTT-GGATCAAGAAATGAAGAAAAATAGTGAATTAGAAAAAGAGATTATTGGGTAAGATTTTAATATTTTTGTATCATTTA i dasNov3.JH570393 C 0 C 0 e panPan2.chr3 68692 233 - 205426864 M a score=312096.000000 s hg38.chr3_KI270784v1_alt 178460 57 + 184404 ATCAT-TTATTAATTGACTTAACTCTAATATTACTTGA-T----TAAAACCTAGATACAAATT s panTro5.chr3 73985 57 - 202621043 ATCAT-TTATTAATTGACTTAACTCTAATATTACTTGA-T----TAAAACCTAGATACAAATT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87378 57 + 508821 ATCAT-TTATTAA-TGACTTAACTCTAATATTACTTGATT----TAAAACCTAGATACAAATT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79140906 57 + 117381234 ACCAT-TTAGTAATTGATTTAACTCTAACTTTACTTGA-C----TAAAACTTTGATACAAATT i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 55437 57 - 85730 ATCAT-TTATTGATTGATTTAACTCTAATTTTACTTGA-C----TAAAACCTAGATACAAATT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1463383 57 - 112612857 ACCAT-TTATTAATTGGTTTAATTCTATCTTTATTTGA-C----TAAAACCTAGACACAAATT i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 68377 57 + 97742 ATCAT-TTATTAATTGATTTAACTCTAATTTTACTTGA-C----TAAAACCTAGATACAAATT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3719001 57 - 108555830 ACCAT-TTATTAATTGATTTAACTCTAACTTTACTTGA-C----TAAAACCTAGATACAAATT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 68195 57 + 85016 ATCAT-TTATTAATTGATTTAACTCTAATTTTACTTGA-C----TAAAACCTAGATACAAATT i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46492499 56 - 47448759 ATCAT-TTATCAATTGATTTAACTCTAATTTTACTTGA-C----T-AAACCTACACACAAATT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 36780 57 + 8899380 ACCAT-TTATTAATTGATTTAACTAAAATTTTACTTGA-C----TAAAACATAGATACAAATT i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19680035 57 - 27850971 TCTAT-TTATGAATTCATTTAACTATAATTTTACTTTA-T----TAAAGCCTAACTGCAAATT i otoGar3.GL873538 C 0 C 0 s canFam3.chr2 79142750 56 - 85426708 ACCat-taattaattgatttaattgtaattttatttta------taaatCAGAAATAGAAATT i canFam3.chr2 C 0 I 15 s dasNov3.JH570393 1783100 62 - 2296528 ACTATAAAATTATTTGAGTTAGCAATAATTTAATTTTA-CTAATTAAAATCTGAACACAAATT i dasNov3.JH570393 C 0 C 0 e macNem1.NW_012020287v1 69085 5165 + 4899514 M e panPan2.chr3 68692 233 - 205426864 M a score=13106.000000 s hg38.chr3_KI270784v1_alt 178517 5 + 184404 CATTT s panTro5.chr3 74042 5 - 202621043 CATTT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87435 4 + 508821 CA-TT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79140963 5 + 117381234 CATTT i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 55494 5 - 85730 CATTT i rheMac8.chrUn_NW_014858614v1 C 0 I 319 s macFas5.chr15 1463440 5 - 112612857 TATTT i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 68434 5 + 97742 CATTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3719058 5 - 108555830 CATCT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 68252 5 + 85016 CATGT i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46492555 5 - 47448759 CATTT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 36837 5 + 8899380 CATTT i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19680092 1 - 27850971 T---- i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1783162 5 - 2296528 CATTT i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79142806 15 - 85426708 I e macNem1.NW_012020287v1 69085 5165 + 4899514 M e panPan2.chr3 68692 233 - 205426864 M a score=286482.000000 s hg38.chr3_KI270784v1_alt 178522 55 + 184404 TATGTCTGCATTTTCATAATTAAACGA---AATCTATTTTAAAATGTATTTTGGAAAC s panTro5.chr3 74047 55 - 202621043 TATGTCTGCATTTTCATAATTAAACGA---AATCTATTTTAAAATGCATTTTGGAAAC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87439 53 + 508821 TATGTCTGCATTTTCATAATTAAATGA---AATCTA-TTTAAAATGTA-TTTGGAAAC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79140968 55 + 117381234 TATGTCTGCATTTTCATAATTAAACGA---ATTCTATTTTAAAATGTATTTCAGAAAC i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 55818 55 - 85730 TATGTCTGCATTTTCATAATTAAACGA---AATCTATTTTAAAATGTATTTCAGAAAC i rheMac8.chrUn_NW_014858614v1 I 319 C 0 s macFas5.chr15 1463445 51 - 112612857 TATATCAGCATTTTCA----TGAACGA---ATTCTATTTCAAAATGCATTTCAGAAAC i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 68439 55 + 97742 TATGTCTGCATTTTCATAATTAAACGA---AATCTATTTTAAAATGTATTTCAGAAAC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3719063 55 - 108555830 TATGTCTGCATTTTCATAATTAAACGA---ATTCTATTTTAAAATGTATTTCAGAAAC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 68257 55 + 85016 TATGTCTGTATTTTCATAATTAAACGA---AATCTATTTTAAAATGTATTTCAGAAAC i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46492560 55 - 47448759 TATGTCTGCATTTTCATAATTAAATGA---AGTATATTTTAAAATGTATTTTAGAAAC i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 36842 55 + 8899380 TATGTCTGTATTTTCataattaaacaa---attctattttaaaatttattttaGAAAC i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19680093 56 - 27850971 --TATCTGCATTTTTAAAAGTAAACAAGTTATTCTATTTAAAAATTTATTTCAGGAAC i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1783167 51 - 2296528 TGTATTTGCATTTTCataataaa-------aaattattttaaaGTTTACTTCAGAAAC i dasNov3.JH570393 C 0 I 113 e canFam3.chr2 79142806 15 - 85426708 I e macNem1.NW_012020287v1 69085 5165 + 4899514 M e panPan2.chr3 68692 233 - 205426864 M a score=-231.000000 s hg38.chr3_KI270784v1_alt 178577 2 + 184404 T-----C s panTro5.chr3 74102 2 - 202621043 T-----C i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87492 2 + 508821 G-----C i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141023 2 + 117381234 T-----C i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 55873 2 - 85730 T-----C i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1463496 2 - 112612857 T-----G i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 68494 2 + 97742 T-----C i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3719118 2 - 108555830 T-----C i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 68312 2 + 85016 A-----C i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46492615 7 - 47448759 TCACAAC i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 36897 2 + 8899380 T-----C i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19680149 2 - 27850971 T-----C i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79142806 15 - 85426708 I e dasNov3.JH570393 1783218 113 - 2296528 I e macNem1.NW_012020287v1 69085 5165 + 4899514 M e panPan2.chr3 68692 233 - 205426864 M a score=29800.000000 s hg38.chr3_KI270784v1_alt 178579 6 + 184404 ACAACA s panTro5.chr3 74104 6 - 202621043 ACAACA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87494 6 + 508821 ACAACA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141025 6 + 117381234 ACAACA i nomLeu3.chr8 C 0 I 5 s rheMac8.chrUn_NW_014858614v1 55875 6 - 85730 ACAACA i rheMac8.chrUn_NW_014858614v1 C 0 I 5 s macFas5.chr15 1463498 6 - 112612857 ACAGCA i macFas5.chr15 C 0 I 5 s cerAty1.NW_012005170v1 68496 6 + 97742 ACAACA i cerAty1.NW_012005170v1 C 0 I 5 s chlSab2.chr12 3719120 6 - 108555830 ACAACA i chlSab2.chr12 C 0 I 163 s manLeu1.NW_012101680v1 68314 6 + 85016 ACAACA i manLeu1.NW_012101680v1 C 0 I 5 s calJac3.chr18 46492622 6 - 47448759 ACAACA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 36899 6 + 8899380 ACAACA i saiBol1.JH378197 C 0 C 0 e canFam3.chr2 79142806 15 - 85426708 I e dasNov3.JH570393 1783218 113 - 2296528 I e otoGar3.GL873538 19680151 0 - 27850971 C e macNem1.NW_012020287v1 69085 5165 + 4899514 M e panPan2.chr3 68692 233 - 205426864 M a score=39990.000000 s hg38.chr3_KI270784v1_alt 178585 12 + 184404 TTATAGGCATGT s panTro5.chr3 74110 12 - 202621043 TTATAGGCATGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87500 11 + 508821 TTATAGGCATG- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141036 12 + 117381234 TTATAGGCATAT i nomLeu3.chr8 I 5 I 142 s rheMac8.chrUn_NW_014858614v1 55886 12 - 85730 TTATAGGCATGT i rheMac8.chrUn_NW_014858614v1 I 5 C 0 s macFas5.chr15 1463509 12 - 112612857 TTATAGGCATAC i macFas5.chr15 I 5 C 0 s cerAty1.NW_012005170v1 68507 12 + 97742 TTATAGGCATGT i cerAty1.NW_012005170v1 I 5 C 0 s manLeu1.NW_012101680v1 68325 12 + 85016 TTATAGGCATGT i manLeu1.NW_012101680v1 I 5 C 0 s calJac3.chr18 46492628 12 - 47448759 TTACAGGCATGT i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 36905 12 + 8899380 TTATAGGTATGT i saiBol1.JH378197 C 0 C 0 e canFam3.chr2 79142806 15 - 85426708 I e dasNov3.JH570393 1783218 113 - 2296528 I e otoGar3.GL873538 19680151 0 - 27850971 C e chlSab2.chr12 3719126 163 - 108555830 I e macNem1.NW_012020287v1 69085 5165 + 4899514 M e panPan2.chr3 68692 233 - 205426864 M a score=3600.000000 s hg38.chr3_KI270784v1_alt 178597 1 + 184404 G s panTro5.chr3 74122 1 - 202621043 G i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87511 1 + 508821 G i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 55898 1 - 85730 G i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1463521 1 - 112612857 G i macFas5.chr15 C 0 I 140 s cerAty1.NW_012005170v1 68519 1 + 97742 G i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 68337 1 + 85016 G i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46492640 1 - 47448759 G i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 36917 1 + 8899380 G i saiBol1.JH378197 C 0 C 0 e canFam3.chr2 79142806 15 - 85426708 I e dasNov3.JH570393 1783218 113 - 2296528 I e otoGar3.GL873538 19680151 0 - 27850971 C e chlSab2.chr12 3719126 163 - 108555830 I e macNem1.NW_012020287v1 69085 5165 + 4899514 M e nomLeu3.chr8 79141048 142 + 117381234 I e panPan2.chr3 68692 233 - 205426864 M a score=8950.000000 s hg38.chr3_KI270784v1_alt 178598 6 + 184404 CGTCAT s panTro5.chr3 74123 6 - 202621043 CGTCAT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87512 6 + 508821 CGTCAT i gorGor5.CYUI01015884v1 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 55899 6 - 85730 AGTCAT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s cerAty1.NW_012005170v1 68520 6 + 97742 AGTCAT i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 68338 6 + 85016 AGTCAT i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46492641 6 - 47448759 GGCCAG i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 36918 6 + 8899380 CATCAT i saiBol1.JH378197 C 0 C 0 e canFam3.chr2 79142806 15 - 85426708 I e dasNov3.JH570393 1783218 113 - 2296528 I e otoGar3.GL873538 19680151 0 - 27850971 C e chlSab2.chr12 3719126 163 - 108555830 I e macNem1.NW_012020287v1 69085 5165 + 4899514 M e macFas5.chr15 1463522 140 - 112612857 I e nomLeu3.chr8 79141048 142 + 117381234 I e panPan2.chr3 68692 233 - 205426864 M a score=28899.000000 s hg38.chr3_KI270784v1_alt 178604 9 + 184404 GGGGGCGGG s panTro5.chr3 74129 9 - 202621043 GGGGGCGGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87518 9 + 508821 GGGGGCGGG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141190 9 + 117381234 GGGGGTGGG i nomLeu3.chr8 I 142 C 0 s rheMac8.chrUn_NW_014858614v1 55905 9 - 85730 AGGGGCAGG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1463662 9 - 112612857 GGGGGCGGA i macFas5.chr15 I 140 C 0 s cerAty1.NW_012005170v1 68526 9 + 97742 GGGGGCAGG i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 68344 9 + 85016 GGGGGCAGG i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46492647 9 - 47448759 GGGGGCAGG i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 36924 9 + 8899380 CAGGGAGGG i saiBol1.JH378197 C 0 C 0 e canFam3.chr2 79142806 15 - 85426708 I e dasNov3.JH570393 1783218 113 - 2296528 I e otoGar3.GL873538 19680151 0 - 27850971 C e chlSab2.chr12 3719126 163 - 108555830 I e macNem1.NW_012020287v1 69085 5165 + 4899514 M e panPan2.chr3 68692 233 - 205426864 M a score=254263.000000 s hg38.chr3_KI270784v1_alt 178613 67 + 184404 AGTCAGCTGAGCTGCTGGGGCAAGGTTGGGATG-AAAAAATTTATATTAAAAACATATAAAAAAAGAA s panTro5.chr3 74138 67 - 202621043 AGTCAGCTGAGCTGCTGGGGCAAGGTTGGGATG-AAAAAATTTATATTAAAAACATATAAAAAAAGAA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87527 66 + 508821 AGTCAGCTGAGCTGCTGGGGCAAGGTTGGGATG-AAAATGTTATTATT-AAAACATATTAAAAAAGAA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141199 67 + 117381234 AGTCAGCTGAGCTGCTGGGGCGAGGTTGGGATG-AAAAAATTTATATTAAAAATATGTGAAAAAAGAA i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 55914 66 - 85730 AGTCAGCTGAGCTGCTGGGGCAAGGTTGGGATG-AAAAAATTTGTATTAAAAATATATGAAAAAAAG- i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1463671 67 - 112612857 AGTCAGATGAGCTGCTGGGGTGAGGTTGGGATGAAAAAAATTTATATTAAAAATATGTGAAAAAAAG- i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 68535 63 + 97742 AGTCAGCTGAGCTGCTGGGGCAAGGTTGGGATG-AAAAAAATTGTATTAAAAATATATGAAAAA---- i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3719289 67 - 108555830 AGTCAGCTAAGCTGCTATGGCGAAGTTGGGATG-AAAACATTCATATTAAAAATATGTGAAAAAAAAG i chlSab2.chr12 I 163 C 0 s manLeu1.NW_012101680v1 68353 63 + 85016 AGTCAGCTGAGCTGCTGGGGCAAGGTTGGGATG-AAAAAAATTGTATTAAAAATATATGAAAAA---- i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46492656 65 - 47448759 AGTTGGCTGAGCTGCTGGGGCAAGGTTGGGATG-aaaaaatttatattaaaaatatGTGAAAAAAA-- i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 36933 67 + 8899380 AGCCAGCTGAGCTGCTGGAGCGAGGTTGGAATG-AAAAACATTATATTAAAAATATGTGAAAAAAAAA i saiBol1.JH378197 C 0 C 0 e canFam3.chr2 79142806 15 - 85426708 I e dasNov3.JH570393 1783218 113 - 2296528 I e otoGar3.GL873538 19680151 0 - 27850971 C e macNem1.NW_012020287v1 69085 5165 + 4899514 M e panPan2.chr3 68692 233 - 205426864 M a score=120779.000000 s hg38.chr3_KI270784v1_alt 178680 29 + 184404 AC-------AACACAATCT-GAAA-TT-TTTTTGAATGC s panTro5.chr3 74205 29 - 202621043 AC-------AACACAATCT-GAAA-TT-TTTTTGAATGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87593 29 + 508821 AC-------AACACAATCT-GAAT-TT-TTTTTGAATGC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141266 29 + 117381234 AC-------AACACAATCT-GAAA-CT-TTTTTGAATGC i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 55980 27 - 85730 ---------AACACAATCT-GAAA-TT-TTTTTGAATGT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1463738 28 - 112612857 ---------AACACAATCT-GAAA-TTGTTTTTGAATGC i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 68598 27 + 97742 ---------AACACAATCT-GAAA-TT-TTTTTGAATGC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3719356 32 - 108555830 AAAC-----AATGCAATCTCAAAA-TT-TTTTTGAATGC i chlSab2.chr12 C 0 I 50 s manLeu1.NW_012101680v1 68416 27 + 85016 ---------AACACAATCT-GAAA-TT-TTTTTGAATGC i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46492721 27 - 47448759 ---------GGCACAATCT-TAAA-TT-TTTTTGAATGC i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 37000 35 + 8899380 GAAACTGACAACACAATCT-TAAA-TT-TTTTT-AATGT i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19680151 30 - 27850971 AC-------AACACAATCT-GAAACTT-TTTTTGAATGC i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79142806 15 - 85426708 I e dasNov3.JH570393 1783218 113 - 2296528 I e macNem1.NW_012020287v1 69085 5165 + 4899514 M e panPan2.chr3 68692 233 - 205426864 M a score=40773.000000 s hg38.chr3_KI270784v1_alt 178709 12 + 184404 CAAAATGCTACA s panTro5.chr3 74234 12 - 202621043 CAAAATGCTACG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87622 12 + 508821 CAAAATGCTACA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141295 12 + 117381234 CAAAACATTACA i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 56007 12 - 85730 GAAAATACTACA i rheMac8.chrUn_NW_014858614v1 C 0 I 313 s macFas5.chr15 1463766 12 - 112612857 CAAAATGTTACA i macFas5.chr15 C 0 I 28 s cerAty1.NW_012005170v1 68625 12 + 97742 GAAAATACTACA i cerAty1.NW_012005170v1 C 0 I 2 s manLeu1.NW_012101680v1 68443 12 + 85016 GAAAATACTACA i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46492748 12 - 47448759 CACAGTATTACA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 37035 12 + 8899380 CAAAATAATACA i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19680181 12 - 27850971 CAAAATAATACA i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79142806 15 - 85426708 I e dasNov3.JH570393 1783218 113 - 2296528 I e chlSab2.chr12 3719388 50 - 108555830 I e macNem1.NW_012020287v1 69085 5165 + 4899514 M e panPan2.chr3 68692 233 - 205426864 M a score=3133.000000 s hg38.chr3_KI270784v1_alt 178721 1 + 184404 C s panTro5.chr3 74246 1 - 202621043 C i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87634 1 + 508821 C i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141307 1 + 117381234 T i nomLeu3.chr8 C 0 I 5 s rheMac8.chrUn_NW_014858614v1 56332 1 - 85730 c i rheMac8.chrUn_NW_014858614v1 I 313 C 0 s macFas5.chr15 1463806 1 - 112612857 c i macFas5.chr15 I 28 C 0 s cerAty1.NW_012005170v1 68639 1 + 97742 t i cerAty1.NW_012005170v1 I 2 C 0 s manLeu1.NW_012101680v1 68455 1 + 85016 C i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46492760 1 - 47448759 C i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 37047 1 + 8899380 C i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19680193 1 - 27850971 C i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79142806 15 - 85426708 I e dasNov3.JH570393 1783218 113 - 2296528 I e chlSab2.chr12 3719388 50 - 108555830 I e macNem1.NW_012020287v1 69085 5165 + 4899514 M e panPan2.chr3 68692 233 - 205426864 M a score=7883.000000 s hg38.chr3_KI270784v1_alt 178722 9 + 184404 ttc-tttttt s panTro5.chr3 74247 10 - 202621043 ttcttttttt i panTro5.chr3 C 0 C 0 s panPan2.chr3 68925 9 - 205426864 ttc-tttttt i panPan2.chr3 M 233 C 0 s gorGor5.CYUI01015884v1 87635 7 + 508821 ---ttctttt i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141313 10 + 117381234 tttatttatt i nomLeu3.chr8 I 5 C 0 s rheMac8.chrUn_NW_014858614v1 56333 7 - 85730 ---ttttttt i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1463807 7 - 112612857 ---atttatt i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 68640 7 + 97742 ---ttttttt i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 68456 7 + 85016 ---ACttttt i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46492761 9 - 47448759 -TTATTCTTT i calJac3.chr18 C 0 I 302 s otoGar3.GL873538 19680194 9 - 27850971 -TTATTTGTT i otoGar3.GL873538 C 0 C 0 e canFam3.chr2 79142806 15 - 85426708 I e dasNov3.JH570393 1783218 113 - 2296528 I e saiBol1.JH378197 37048 0 + 8899380 C e chlSab2.chr12 3719388 50 - 108555830 I e macNem1.NW_012020287v1 69085 5165 + 4899514 M a score=20512.000000 s hg38.chr3_KI270784v1_alt 178731 9 + 184404 --ttttttttt s panTro5.chr3 74257 9 - 202621043 --ttttttttt i panTro5.chr3 C 0 C 0 s panPan2.chr3 68934 9 - 205426864 --ttttttttt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87642 9 + 508821 --ttttttttt i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141323 9 + 117381234 --tatttattt i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 56340 9 - 85730 --ttttttttt i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1463814 9 - 112612857 --tatttattt i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 68647 9 + 97742 --ttttttttt i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 68463 9 + 85016 --ttttttttt i manLeu1.NW_012101680v1 C 0 C 0 s otoGar3.GL873538 19680203 9 - 27850971 AATGATTTT-- i otoGar3.GL873538 C 0 I 378 e canFam3.chr2 79142806 15 - 85426708 I e dasNov3.JH570393 1783218 113 - 2296528 I e calJac3.chr18 46492770 302 - 47448759 I e saiBol1.JH378197 37048 0 + 8899380 C e chlSab2.chr12 3719388 50 - 108555830 I e macNem1.NW_012020287v1 69085 5165 + 4899514 M a score=3452.000000 s hg38.chr3_KI270784v1_alt 178740 7 + 184404 ttttttg-- s panTro5.chr3 74266 7 - 202621043 ttttttt-- i panTro5.chr3 C 0 C 0 s panPan2.chr3 68943 7 - 205426864 tttttgt-- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87651 7 + 508821 ttttttt-- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141332 7 + 117381234 atctttt-- i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 56349 9 - 85730 ttttttttt i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1463823 9 - 112612857 atttttttt i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 68656 9 + 97742 ttttttttt i cerAty1.NW_012005170v1 C 0 C 0 s manLeu1.NW_012101680v1 68472 4 + 85016 tttt----- i manLeu1.NW_012101680v1 C 0 C 0 e canFam3.chr2 79142806 15 - 85426708 I e dasNov3.JH570393 1783218 113 - 2296528 I e otoGar3.GL873538 19680212 378 - 27850971 I e calJac3.chr18 46492770 302 - 47448759 I e saiBol1.JH378197 37048 0 + 8899380 C e chlSab2.chr12 3719388 50 - 108555830 I e macNem1.NW_012020287v1 69085 5165 + 4899514 M a score=868038.000000 s hg38.chr3_KI270784v1_alt 178747 269 + 184404 gagacagagtctgagtctgtcatccaggctggagtgc-aatggtgcattctct-gctcact-gcgacctccacctcccaggttcaagcatttctctggcctcagcctcctgagtagctgggattacaggcatgcaccaccacacctggctaatttttgta-tttttagtagagac-ggagtttcaccatgttggtcaggctggtctcgaactcctgaccttgtgatctgcccacctgggtctcaaaaagtt-ggtgtgagccactgcacccagcc s panTro5.chr3 74273 269 - 202621043 gagacagagtctgagtctttcacccaggctggggtgc-aatggtgcattctct-gctcact-gcaacctccacctcccgggttcaagcatttctctggcctcagcctcctgagtagctgggattacaggcacgcaccgccacacctggctaatttttgta-tttttagtagagat-ggagtttcaccatgttggtcaggctggtctcgaactcctgaccttgtgatctgcccacctgggtctcaaaaagtt-ggtgtgagccactgcacccagcc i panTro5.chr3 C 0 C 0 s panPan2.chr3 68950 269 - 205426864 tagacagagtctgagtctgtcacccaggctggggtgc-aatggtgcattctct-gctcact-gcaacctccacctcccgggttcaagcatttctctggcctcagcctcctgagtagctgggatcacaggcacgcactgccacacctggctaatttttgta-tttttagtagagat-ggagtttcaccatgttggtcaggctggtctcgaactcctgaccttgtgatctgcccacctgggtctcaaaaagtt-ggtgtgagccactgcacccagcc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87658 271 + 508821 gagacagagtctgagtctgtcatccaggctggagtgc-aatggtgcattctctggctcactggcaacctccacctcctaggttcaagcattcctctggcctcagcctcctgagtagctgggattacaggcatgtgccaccacacctggctaatttttgta-tttttagtagagacgggagcttcaccatgttggtcaggctggtcttgaactcctgaccttgtgatctgctcaccttggtctc-aaaagtt-ggtgtgagccactgcacccggcc i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141339 268 + 117381234 gagacagagtctggctctgtcacaaaggctagagtgc-aatgacgcgatctca-gctcact-gcaacctctgcctcctgggttcaagtgattctcttgcctcagcctcctgagtagctgtgattacaggtgtgcaccacc-cgcctggctaatttttgta-tttttagtagagat-ggggtttcactatgttggtcaggctggtctcaaactcctgacttcatgatccacccgcctcggcctcccaaagtt-gtcatgagccactgcgcttagcA i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 56358 271 - 85730 gaaacagagtctgactctctcatccaggctggagtgcaaatagtgcattctct-gctcact-gcaacctccatctcctgggttcaagcgattctctgacctcagcctcctgcgtagctgggattacaggtatgcaccaccacacctggctaatttttgtattttttaatagagat-ggagtttcaccatgttgttcaggctggtctcgaactcctgaccttgtgagccacccatcttggcctcgcaaagtt-ggcatgagccgccgcacccggcc i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1463832 269 - 112612857 gagacagagtctggctctgtcagccaagctggaatgc-aatgacatgatcttg-gctcact-gcaacctccacctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgtgattataggagtgcaccaccccccttggcgaatttttgtg-tttttagtagagac-ggtgtttccccatgttggtcaggctggtttcgaaatcctgatctcatgatccacctgccttggcctcccaaagtt-ggcatgagccactacacttggcG i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 68665 270 + 97742 gagacagagtctgactctgtcatccaggctggagtgcaaatactgcattctct-gctcact-gcaacctccatctcctgggttcaagcgattctctgacctcagcctcctgcgtagctgggattacaggtatgcaccaccacacctggctaatttttgta-tttttaatagagac-ggagtttcaccatgttgttcaggctggtctcgaactcctgaccttgtgagccacccatcttggcctcgcaaagtt-ggcatgagccaccgcacccggcc i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3719438 270 - 108555830 gagacagagtctggctctgtcacccaggctggagtgcaatgac-acgatctcg-gctcact-gcaacctccacttcctgggttcaagtgattctcttgcctgagcctcctgagtagctgtgattacaggagtgcaccaccctgcccggcgaatttttata-tttttagtagagac-agtgtttcaccatgttggtcacgctggtctcaaactcctaacctcatgatccacctgcctcggcctcccaaagtgaggcatgagccattgtgcttggcA i chlSab2.chr12 I 50 C 0 s manLeu1.NW_012101680v1 68476 268 + 85016 gagacagagtctgactctgtcatccaggctggagtgcaaatactgcattctct-gctcact-gcaacctccatctcctgggttcaagcgattctctgacctcagcctcctgagtagctgggattacaggtatgcaccaccacacctggctaatttttgta-tttttaatagag---agagtttcaccatgttgttcaggctggtctcgaactcctgaccttgtgagccacccatcttggcctcgcaaagtt-ggcatgagccaccacacccggcc i manLeu1.NW_012101680v1 C 0 C 0 e canFam3.chr2 79142806 15 - 85426708 I e dasNov3.JH570393 1783218 113 - 2296528 I e otoGar3.GL873538 19680212 378 - 27850971 I e calJac3.chr18 46492770 302 - 47448759 I e saiBol1.JH378197 37048 0 + 8899380 C e macNem1.NW_012020287v1 69085 5165 + 4899514 M a score=6485.000000 s hg38.chr3_KI270784v1_alt 179016 2 + 184404 AT s panTro5.chr3 74542 2 - 202621043 AT i panTro5.chr3 C 0 C 0 s panPan2.chr3 69219 2 - 205426864 AT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87929 2 + 508821 AT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141607 2 + 117381234 AC i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 56629 2 - 85730 AC i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1464101 2 - 112612857 AC i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 68935 2 + 97742 AC i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3719708 2 - 108555830 AC i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 68744 2 + 85016 AC i manLeu1.NW_012101680v1 C 0 C 0 s canFam3.chr2 79142821 2 - 85426708 AT i canFam3.chr2 I 15 C 0 e dasNov3.JH570393 1783218 113 - 2296528 I e otoGar3.GL873538 19680212 378 - 27850971 I e calJac3.chr18 46492770 302 - 47448759 I e saiBol1.JH378197 37048 0 + 8899380 C e macNem1.NW_012020287v1 69085 5165 + 4899514 M a score=86132.000000 s hg38.chr3_KI270784v1_alt 179018 18 + 184404 TTATTCTTTAATGATTTT s panTro5.chr3 74544 18 - 202621043 TTATTCTTTAATGATTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 69221 18 - 205426864 TTATTCTTTAATGATTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87931 18 + 508821 TTATTCTTTAATGATTTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141609 18 + 117381234 GTATTATTTAATGGTTTT i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 56631 18 - 85730 TTATTCTTTAATGATTTT i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1464103 18 - 112612857 GTATTGTTTAATGGTTTT i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 68937 18 + 97742 TTATTCTTTAATGATTTT i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3719710 18 - 108555830 GTATTCTTTAATGGTTTT i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 68746 18 + 85016 TTATTCTTTAATGATTTT i manLeu1.NW_012101680v1 C 0 C 0 s saiBol1.JH378197 37048 18 + 8899380 TTATTCTTTAATAATTTT i saiBol1.JH378197 C 0 C 0 s canFam3.chr2 79142823 18 - 85426708 TTACTGTTCAGTGATTCC i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1783218 113 - 2296528 I e otoGar3.GL873538 19680212 378 - 27850971 I e calJac3.chr18 46492770 302 - 47448759 I e macNem1.NW_012020287v1 69085 5165 + 4899514 M a score=44382.000000 s hg38.chr3_KI270784v1_alt 179036 7 + 184404 GAAAACA s panTro5.chr3 74562 7 - 202621043 GAAAACA i panTro5.chr3 C 0 C 0 s panPan2.chr3 69239 7 - 205426864 GAAAACA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87949 7 + 508821 GAAAACA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141627 7 + 117381234 GAAAACA i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 56649 7 - 85730 GAAAACA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1464121 7 - 112612857 GAAAACA i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 68955 7 + 97742 GAAAACA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3719728 7 - 108555830 GAAAACA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 68764 7 + 85016 GAAAACA i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46493072 7 - 47448759 gaaaaCA i calJac3.chr18 I 302 C 0 s saiBol1.JH378197 37066 7 + 8899380 GAAAACA i saiBol1.JH378197 C 0 C 0 s canFam3.chr2 79142841 7 - 85426708 TTAAATA i canFam3.chr2 C 0 C 0 e dasNov3.JH570393 1783218 113 - 2296528 I e otoGar3.GL873538 19680212 378 - 27850971 I e macNem1.NW_012020287v1 69085 5165 + 4899514 M a score=714183.000000 s hg38.chr3_KI270784v1_alt 179043 150 + 184404 ATAATGAGAAAGCCTTGAACATGTA--ATGTC--AACTGCACTCTTCATTATCTAGTTTCAATTATAATTTC-TG-AAGATATTTTTGCTGTCTTTGGTCA-----ACTTT-----CTTTT--GCAGTATCCTTCTCTGCT-GCATTCAAATTCTTTAA----AGGAGACCTA s panTro5.chr3 74569 150 - 202621043 ATAATGACAAAGCCTTGGACATGTA--ATGTC--AACTGCACTCTTCATTATCTAGTTTCAATGATAATTTC-TG-AAGATATTTTTGCTGTCTTTGGTCA-----TCTTT-----CTTTT--GCAGTACCCTTCTCTGCT-GCATTCAAATTCTTTAA----AGGAGACCTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 69246 150 - 205426864 ATAATGACAAAGCCTTGGACATGTA--ATGTC--AACTGCACTCTTCATTATCTAGTTTCAATGATAATTTC-TG-AAGATATTTTTGCTGTCTTTGGTCA-----TCTTT-----CTTTT--GCAGTACCCTTCTCTGCT-GCATTCAAATTCTTTAA----AGGAGACCTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 87956 152 + 508821 ATAATGACAAAGCCTTGGACATGTA--ATGTC--AACTGCACTCTTCATTATCTTGTTTCAATTTTAATTTCTTG-AAGATATTTTTGCTGTCTTTGGTCA-----TCTTT-----CTTTT--GCAGTCTATCTTCCTGCTGGCATTCAAATTTCTTAA----AGGAGACCTA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141634 149 + 117381234 ATAATGACAACGCTTTGGACATGTA--ATGTC--AAGTGCACTCTTCATTATCTAGTTTGAACTTTTATTTC-TG-AAGACATTTTTGCTGTATTTGGTCA-----TCTTTTCTTCCTTTT--GTAGTA---TTCTCTGCT-GCATTCAAATTTTTTAA-------AGACCTA i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 56656 152 - 85730 ATAATGACAAAGCCTTGGACATATA--ATGTCAGAAATGCACTCTGCATTATCTAGTTTGAATTTTCATTTC-TG-AAGATATTTTTGCTGTCTTTGGTCA-----TCTTC-----CTTTT--GCAGTATCCTTCTCTGCT-GCATTCAGATTCTTTAA----AGAAGACCTA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1464128 152 - 112612857 ATAATGACAACGCTTTGGACATGTA--ATGTC--AAGTGCACTCTTCATTATCTAGTTTGAATTTTTATTTC-TG-AAGATATTTTTGCTGTATTTGGTCATGTTTTCTTC-----CTTTC--GTAGTATTCTTCTCTTCT-GCATTCAAATTTTTTA-------AAGACCTT i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 68962 152 + 97742 ATAATGACAAAGCCTTGGACATATA--ATGTCAAAACTGCACTCTTCATTATCTAGTTTGAATTTTCATTTC-TG-AAGATATTTTTGCTGTCTTTGGTCA-----TCTTC-----CTTTT--GCAGTATCCTTCTCTGCT-GCATTCAGATTCTTTAA----AGAAGACCTA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3719735 152 - 108555830 ATAATGACAATGCTTTGGGCATGTG--ATGTCAAG--TACACTCTTCATGACCTAGTTTGAATTTTTATTTC-TG-AAGATATTTTTGCTGTATTTGGTCATCTTTTCTTC-----CTTTT--ACAGTGTTCTTCTCTGCT-GCATTCAAATTTTTTT-------AAGACCTA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 68771 151 + 85016 ATAATGACAAAGCCTTGGACATATA--ATGTCAAAACTGCACTCTTCATTATCTAGTTTGAATTTTCATTTC-TG-AAGATATTTTTGCTGTCTGTGGTCATTTTTTCTTC-----CCTTT--GTAGTA---TCCTCTGCT-GCATTCAAATTCTTTA-------AAGACCTA i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46493079 152 - 47448759 GTATTGACAAAGCCCTGGACCTATC--ATGTC--AAGTAGGCTC-TCATTATCTAGTTTGAATTTTTACTTC-TG-AAGATATTTTTGATATC--TGCTCATCATTTCTTC-----CTTTT--GTAGAATCCTTCTCTGCT-GCATTTAAATTCTTTAA----AGAAGACCTA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 37073 154 + 8899380 GTAATGACAAAGCCTTGGACACATA--ATGTC--AACTGCACTCTTCATTATCTAGTACGAATTTTTATTTC-TG-AAGAT-TTTTTGCTGTCTTTGGTCATCTTTTCTTC-----CTTTT--GTAGTATCCTTCTCTGCT-GCATTCAGAGTCTTTAA----AGAAGACCTA i saiBol1.JH378197 C 0 I 244 s canFam3.chr2 79142848 144 - 85426708 ATAACAACAATGCCTTTAACATAGG--TAGTC--AACTGCACTTTTCATTGTCCACCTTGAATT---ATTTC-TGCAAGATATCTTTGT--TCTTAGATAA-----TCTTT-----CCTTTTAGTAGTGTTCTTAAAACAG-ATATTCTAATATCTAA--------AAACCTA i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1783331 150 - 2296528 atTATGACAGTGCCTTTTGCATGTATGATGTC--TGCTTCACTCTTCCTCATCTACCCTGTATTTTTATTTC-AGTACGATATTCT---------TTGTTA-----ACTGT-----CTTTTTAGTAGTGGTGTTCCCTTTA-GCATTCAAATATTTTAATATCTAAAAACCTA i dasNov3.JH570393 I 113 C 0 e otoGar3.GL873538 19680212 378 - 27850971 I e macNem1.NW_012020287v1 69085 5165 + 4899514 M a score=213504.000000 s hg38.chr3_KI270784v1_alt 179193 34 + 184404 TTCGTGTCATTCTTTAAC---ATCAAAATTTATCTTG s panTro5.chr3 74719 34 - 202621043 TTCGTGTCATTCTTTAAC---ATCAAAATTTATCTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 69396 34 - 205426864 TTCGTGTCATTCTTTAAC---ATCAAAATTTATCTTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 88108 34 + 508821 TTCATGTCATTCTTTACA---ATCAAAATTTATCTTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141783 34 + 117381234 TTTGTATCCTTCTTTAAC---ATCAAAATTTATCTTG i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 56808 34 - 85730 TTCGTGTCATTCTTTAAC---ATCGAAATTTATCTTG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1464280 34 - 112612857 TTCGTATCATTCTTTAAC---ATCAAAATTTATCTTG i macFas5.chr15 C 0 C 0 s cerAty1.NW_012005170v1 69114 34 + 97742 TTCGTGTCATTCTTTAAC---ATCAAAATTTATCTTG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3719887 34 - 108555830 TTTGTGTCATTCTCTAAC---ATCAAAATTTATCTTG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 68922 34 + 85016 TTTGTGTCATTCTTTAAC---ATCAAAATTTATCTTG i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46493231 34 - 47448759 TTTGTGTCATTCTTTAGC---ATCAAAATTTACCTTG i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 37471 34 + 8899380 ttTGTGGCATTCTTTAAC---ATCAAAATTTATCTTG i saiBol1.JH378197 I 244 C 0 s canFam3.chr2 79142992 35 - 85426708 --CCTGTCATCATGTAACAATATCAAAAATTATCTTG i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1783481 36 - 2296528 TCTGTGTC-TTCTATAACAACATCATAAATTCTTTTG i dasNov3.JH570393 C 0 C 0 e otoGar3.GL873538 19680212 378 - 27850971 I e macNem1.NW_012020287v1 69085 5165 + 4899514 M a score=121228.000000 s hg38.chr3_KI270784v1_alt 179227 19 + 184404 ATATGTA-GCTTGTATTTTG s panTro5.chr3 74753 19 - 202621043 ATATGTA-GCTTGTATTTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 69430 19 - 205426864 ATATGTA-GCTTGTATTTTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 88142 20 + 508821 ATATGTAGGCTTGTATTTTG i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141817 19 + 117381234 ATATATA-GCTTGTATTTTG i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 56842 19 - 85730 ATATGTA-GCTTGTATTTTG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1464314 19 - 112612857 ATATATA-GCTTGTATTTTG i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 74250 19 + 4899514 ATATGTA-GCTTGTATTTTG i macNem1.NW_012020287v1 M 5165 C 0 s cerAty1.NW_012005170v1 69148 19 + 97742 ATATGTA-GCTTGTATTTTG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3719921 19 - 108555830 ATATATA-GCTTGTATTTTG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 68956 19 + 85016 ATATGTA-GCTTATATTTTG i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46493265 19 - 47448759 ATATGTA-GCTTGTATTTTG i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 37505 19 + 8899380 ATATGTA-GCTCATATTTTA i saiBol1.JH378197 C 0 C 0 s canFam3.chr2 79143027 6 - 85426708 --------GTTTGA------ i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1783517 12 - 2296528 --------GCTTTTATGTTG i dasNov3.JH570393 C 0 C 0 e otoGar3.GL873538 19680212 378 - 27850971 I a score=127032.000000 s hg38.chr3_KI270784v1_alt 179246 21 + 184404 TTTCTGC----CTCTTTT----T----CTTTTA s panTro5.chr3 74772 21 - 202621043 TTTCTGC----CTCTTTT----T----CTTTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 69449 21 - 205426864 TTTCTGC----CTCTTTT----T----CTTTTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 88162 21 + 508821 TTTCTGC----CTCTTTT----T----CTTTTA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141836 25 + 117381234 TTTCTGCTTCTTTCTTTT----T----CTTTTA i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 56861 21 - 85730 TTTCTGC----TTCTTTC----T----CTTTCA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1464333 25 - 112612857 TTTCTGC----TTCTTTCTTTTT----CTTTTA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 74269 21 + 4899514 TTTCTGC----TTCTTTC----T----CTTTCA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 69167 21 + 97742 TTTCTGC----TGCTTTC----T----CTTTCA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3719940 25 - 108555830 TTTCTGC----TTCTTTC----TTTTGCTTTTA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 68975 21 + 85016 TTTCTGC----TTCTTTC----T----CTTTCA i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46493284 21 - 47448759 TTTCTGT----TTTTCTT----C----CTTTTA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 37524 20 + 8899380 TTTCTGC----TTTT-TT----T----CTTTTA i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19680590 20 - 27850971 TTTCTGC----CTCtttt----t-----taaaa i otoGar3.GL873538 I 378 C 0 s canFam3.chr2 79143033 21 - 85426708 CTTCTAT----TTCTTTT----T----Atttta i canFam3.chr2 C 0 I 1747 s dasNov3.JH570393 1783529 20 - 2296528 TTTCTGT----CTCTATT----T----TTTGA- i dasNov3.JH570393 C 0 C 0 a score=424873.000000 s hg38.chr3_KI270784v1_alt 179267 94 + 184404 AATAtaaaa--catatcatg-gaaattt--actcat-tttacat-gggcccttctgttgtatacatgaagt-atacatgctattaaac--ttc----tgtct-TACAGA s panTro5.chr3 74793 94 - 202621043 AATATAAAA--CATATCATG-gaaattt--actcat-tttacat-gggcccttctgttgtatacatgaagt-atacatgctattaaac--ttc----tgtCT-TACAGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 69470 94 - 205426864 AATAtaaaa--catatcatg-gaaattt--actcat-tttacat-gggcccttctgttgtatacatgaagt-atacatgctattaaac--ttc----tgtct-TACAGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 88183 102 + 508821 AATATAAAACCCATATCATGCGAAATTTTACCTCATCTTTACATGGGGCCCTTCTGTTGTATACATGAAGTAATACATGCTATTTAA---TTC----TGTCTATACAGA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141861 91 + 117381234 GATATAAAA--CAT---ATG-gaaattt--actcat-tttacat-gggtacctccattgtatacatgaagt-atacatcttattaaac--ttc----tgttt-TACAGA i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 56882 92 - 85730 GATATAAAA--CATATCATG-gaaattt--actcat-tttacat-gggtctctctgttgtatacatgaagt-atacatgttattaaac--t------tGTTT-TACACA i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1464358 91 - 112612857 GATATAAAA--CAT---ACG-gaaattt--actcat-tttacat-gggtacctcccttgtatacatgaagt-atacatcttactaaac--ttc----tgttt-tataga i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 74290 92 + 4899514 GATAtaaaa--catatcatg-gaaattt--actcat-tttacat-gggtctctctgttgtatacatgaagt-atacatgttattaaac--t------tgttt-TACACA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 69188 90 + 97742 GATATAAAA--CAT--CATG-gaaattt--actcat-tttacat-gggtctctctgttgtatacatgaagt-atacatgttattaaac--t------tGTTT-TACACA i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3719965 94 - 108555830 GATATAAAA--CATATCATG-gaaattt--actcat-tttacat-gggtacctccactgtatacatgaagt-agacatcttattaaacttt------tgttt-TACAGA i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 68996 92 + 85016 GATAtaaaa--catatcatg-gaaattt--actcat-tttacat-gggtctctctgttgtatacatgaagt-atacatgttattaaac--t------tGTTT-TACACA i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46493305 94 - 47448759 TATATAAAA--TGTATCACG-gaagttt--acccat-tttacat-ggatacctcctttgtatacatgaagt-gcacatgttattaaac--ttc----tgttt-TACAGA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 37544 89 + 8899380 AATATAAAA--CATAT------aaattt--actcat-tttacat-gagtacctccattgtatacatgaagc-atacatgtcgtcgaac--ttc----tgttt-TACAGA i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19680610 96 - 27850971 attataaaa--tataaCATG-gaaattt--acctat-tttttgt-gggtatttcccatttctatgtgaggt---aaatgttatcaaac--ttctatttgttt-tAAAAT i otoGar3.GL873538 C 0 C 0 s dasNov3.JH570393 1783549 8 - 2296528 GCTATAAA----------------------------------------------------------------------------------------------------- i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79143054 1747 - 85426708 I a score=25427.000000 s hg38.chr3_KI270784v1_alt 179361 6 + 184404 Aataaa s panTro5.chr3 74887 6 - 202621043 Aataaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 69564 6 - 205426864 Aataaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 88285 6 + 508821 ATAAAT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141952 6 + 117381234 AATAAA i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 56974 6 - 85730 Aatata i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1464449 6 - 112612857 aataaa i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 74382 4 + 4899514 AATA-- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 69278 6 + 97742 Aataaa i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3720059 6 - 108555830 Aataaa i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 69088 6 + 85016 Aataaa i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46493399 6 - 47448759 AATAAA i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 37633 6 + 8899380 AATAAA i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873538 19680706 6 - 27850971 ATTAGA i otoGar3.GL873538 C 0 I 219 s canFam3.chr2 79144801 4 - 85426708 AATA-- i canFam3.chr2 I 1747 C 0 e dasNov3.JH570393 1783557 0 - 2296528 C a score=226827.000000 s hg38.chr3_KI270784v1_alt 179367 56 + 184404 ttttata-tatatat--aaatatatgcataacttaa--a----AAGAGT-AAAATGAGCATTCA-TG s panTro5.chr3 74893 56 - 202621043 ttttata-tatatat--aaatatatgcataacttaa--a----AAGAGT-AAAATGAGCATTCA-TG i panTro5.chr3 C 0 C 0 s panPan2.chr3 69570 56 - 205426864 ttttata-tatatat--aaatatatGCATAACTTGA--A----AAGAGT-AAAATGAGCATTCA-TG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 88291 61 + 508821 TCTTATACTATATATTAAGATAAATGCATAACTTAA--A----AAGAGTAAAAATGAGCATTCAGTT i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79141958 49 + 117381234 TTTTATA-TAAAAAG-----------TATAACCTAAAGA----AAGAGT-AAAATGAGCATTCA-TG i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 56980 55 - 85730 ---tata-tatatat--aaatatatgtataACTTAC--A-AGTAAGAGT-AAAATGAGCA-TCA-TG i rheMac8.chrUn_NW_014858614v1 C 0 C 0 s macFas5.chr15 1464455 60 - 112612857 tattatg-tatatat--aaatatatgtataACCTAA--AGAAAAAGAGT-AAAATGGGCATTCA-TA i macFas5.chr15 C 0 C 0 s macNem1.NW_012020287v1 74386 56 + 4899514 ---TATa-tatatat--aaatatatgtataacttac--a-agtaagagt-aaaatgagcattca-tg i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012005170v1 69284 59 + 97742 ttatata-tatataa--aaatatatgtataACTTAC--A-AGTAAGAGT-AAAATGAGCATTCA-TG i cerAty1.NW_012005170v1 C 0 C 0 s chlSab2.chr12 3720065 59 - 108555830 ttatata-tatgtat--aaatatatgtataACCTAA--AGAAAAAGAGT-AAAA-GAGCATTCA-TG i chlSab2.chr12 C 0 C 0 s manLeu1.NW_012101680v1 69094 57 + 85016 ttatata-ta--tat--aaatatatgtataACTTAC--A-AGTAAGAGT-AAAATGAGCATTCA-TG i manLeu1.NW_012101680v1 C 0 C 0 s calJac3.chr18 46493405 52 - 47448759 TTATACG-T----------TTATACATATAACTTAA--AGAAAAAGAGT-AAAATGAACATTTC-TG i calJac3.chr18 C 0 C 0 s saiBol1.JH378197 37639 56 + 8899380 TTATATG-TA--CAT--AAATATATCTATAACTTAA--AGAAAA--AGT-AAAATGACTAGTCA-TG i saiBol1.JH378197 C 0 C 0 s canFam3.chr2 79144805 53 - 85426708 TATCATT-CATACAA--AAATATATGTCTGACTTAA--G-------AAT-AAAATGAACAATTG-CA i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1783557 49 - 2296528 ---TATA-CATATAA--AAATATATGTATGATTAAA--G----AAGAAT-AAAATGGTCATG----- i dasNov3.JH570393 C 0 C 0 e otoGar3.GL873538 19680712 219 - 27850971 I a score=45168.000000 s hg38.chr3_KI270784v1_alt 179423 21 + 184404 TTTTGATCA------CAG-TTTTTTTTT s panTro5.chr3 74949 22 - 202621043 TTTTGATCA------CAGATTTTTTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 69626 21 - 205426864 TTTTGATCA------CAG-ATTTTTTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 88352 22 + 508821 TTTGGATCA------CAAGATTTTTTTA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79142007 21 + 117381234 TTTTGATCA------CAG-ATTTAAAAA i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 57035 21 - 85730 TTTTGATCA------CAG-ATTTTTTTT i rheMac8.chrUn_NW_014858614v1 C 0 I 3 s macFas5.chr15 1464515 21 - 112612857 TTTTGATAA------CAG-ATTATTTTT i macFas5.chr15 C 0 I 3 s macNem1.NW_012020287v1 74442 21 + 4899514 ttttgatca------cag-atttttttt i macNem1.NW_012020287v1 C 0 I 3 s cerAty1.NW_012005170v1 69343 21 + 97742 TTTTGATCA------CAG-ATTTTTTTT i cerAty1.NW_012005170v1 C 0 I 3 s chlSab2.chr12 3720124 20 - 108555830 TTTTGATCA------CAG-ATTTT-AAA i chlSab2.chr12 C 0 I 3 s manLeu1.NW_012101680v1 69151 19 + 85016 TTTTGATCA------CAG-ATTTT--TT i manLeu1.NW_012101680v1 C 0 I 3 s calJac3.chr18 46493457 20 - 47448759 TTT-GATCA------CAG-ATTTTTTTT i calJac3.chr18 C 0 I 6 s saiBol1.JH378197 37695 11 + 8899380 ttt-----------------tttttttt i saiBol1.JH378197 C 0 I 319 s otoGar3.GL873538 19680931 21 - 27850971 tttttgttg------cag-ttgtctttg i otoGar3.GL873538 I 219 I 26 s canFam3.chr2 79144858 17 - 85426708 TTTTTACCAC----TCAG-ATA------ i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1783606 25 - 2296528 -TTTTACAACCCCTCCGA-ATTTTTTT- i dasNov3.JH570393 C 0 C 0 a score=1346390.000000 s hg38.chr3_KI270784v1_alt 179444 188 + 184404 AAAT-----------G---GAATGT-----GTCTTTGAAGCCCTGA-------ACAC-------------------------AGC-TACTTTTCTATTTATTTACTGAGCACTTAAGTTGGTTTT---CTGATTCTAATGAACATTT-TTCTGT-CAT-------TGCC-T---TTCTCTACATGGTTCTGCATATCTTTCATTTTGTTGA-CATTTTG--TCAGGAAAGATCTCTAGATCTCTTCTTCAA--A--GTCTT-TA s panTro5.chr3 74971 188 - 202621043 AAAT-----------G---GAATGT-----GTCTTTGAAGCCCTGA-------ACAC-------------------------AGC-TACTTTTCTATTTATTTACTGAGCACTTAAGTTGGTTTT---CTGATTCTAATGAACATTT-TTCTGT-CAT-------TGCC-T---TTCTCTACATGGTTCTGCATATCTTTCATTTTGTTGA-CATTTTG--TCAGGAAAGATCTCTAGATCTCTTCTTCAA--A--GTCTT-TA i panTro5.chr3 C 0 C 0 s panPan2.chr3 69647 188 - 205426864 AAAT-----------G---GAATGT-----GTCTTTGAAGCCCTGA-------ACAC-------------------------AGC-TACTTTTCTATTTATTTACTGAGCACTTAAGTTGGTTTT---CTGATTCTAATGAACATTT-TTCTGT-CAT-------TGCC-T---TTCTCTACATGGTTCTGCATATCTTTCATTTTGTTGA-CATTTTG--TCAGGAAAGATCTCTAGATCTCTTCTTCAA--A--GTCTT-TA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 88374 195 + 508821 AAAT----------GG---GAATGT-----GTCTTTGAAGCCCTGA-------ACAC-------------------------AGCTTATTTTTCTTTTATTTTACTG-GCAC-TAAGTTGGTTGTTCCTTTATTCT-ATGAACATTTCTTCTGTGCAT-------TGCCTT---TTCTCTAATGTGTTCTGCATATCTTTCATTTTGTTGA-CATTTTGGTCCAGGAAAGATCTCTAGATCTCTTCTTCAA--A--GTCTT-TA i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79142028 188 + 117381234 AAAA---------GGG---GAATGT-----GTCTTTGAAGCCCTGA-------ACAC-------------------------AGC-TACTTTTCTATGTATTTACTGAGCACTTAAGTTAGTTTT---CTGATTCTAATCAACATTT-TTCTGT-CAT-------TGTC-T---TTCTCTACATGGTTTTG--TATCTTTCATTTTGTTGA-CATTATG--TCAGTAAAGATCTCTAGATCTCTTCTTCAA--A--GTCTT-TA i nomLeu3.chr8 C 0 C 0 s rheMac8.chrUn_NW_014858614v1 57059 188 - 85730 AAAT-----------G---GAATGT-----GTCTTTGAAGCCCTGA-------ACAC-------------------------AGA-TACTTTTCTATTTATTTACTGAGCACTTAAGTTGGTTTT---CTGATTCTAATCAACATTT-TTCTGT-CGT-------TGTC-T---TTCTCTACAGGGTTCTGCATATCTTTCATTTTGTTGA-CATTTTG--TCAGGAAAGATCTCTAGATCTCTTCGTCAA--A--GTCTT-TA i rheMac8.chrUn_NW_014858614v1 I 3 I 15 s macFas5.chr15 1464539 188 - 112612857 AAAT-----------G---GAATGT-----GTCTTTGAAGCCCTGA-------ACAC-------------------------AGC-TACTTTTCTATTTATTTACTGAGCACTTAAGTTGGTTCT---CTGATCCTAATCAACATTT-TTCTGT-CAT-------TGCC-T---TTCTCTACATTGTTTTGTATCTCTTTCATTTTGTTGA-CATTATG--TCAGTAAAGATCTCTAGATCTCTTCTTCAA--G--GTCTT-TA i macFas5.chr15 I 3 C 0 s macNem1.NW_012020287v1 74466 188 + 4899514 aaat-----------g---gaatgt-----gtctttgaagcccTGA-------ACAC-------------------------AGA-TACTTTTCTATTTATTTACTGAGCACTTAAGTTGGTTTT---CTGATTCTAATCAACATTT-TTCTGT-CGT-------TGTC-T---TTCTCTACATGGTTCTGCATATCTTTCATTTTGTTGA-CATTTTG--TCAGGAAAGATCTCTAGATCTCTTCGTCAA--A--GTCTT-TA i macNem1.NW_012020287v1 I 3 N 0 s cerAty1.NW_012005170v1 69367 188 + 97742 AAAT-----------G---GAATGT-----GTCTTTGAAGCCCTGA-------ACAC-------------------------AGC-TACTTCTCTATTTATTTACTGAGCACTTAAGTTGGTTTT---CTCATTCTAATCAACATTT-TTCTGT-CGT-------TGTC-T---TTCTCTACATGGTTCTGCATATCTTTCATTTTGTTGA-CATTTTG--TCAGGAAAGATCTCTAGATCTCTTCGTCAA--A--GTCTT-TA i cerAty1.NW_012005170v1 I 3 I 15 s chlSab2.chr12 3720147 187 - 108555830 AAAT-----------G---GAATGT-----GTCTTTGAAGTCCTGA-------ACAC-------------------------AGC-TAGTTTTCTATTTATTTACTGAGTACTTAAGTTGGTTCT---CTGATTCTATTCAACATTT-TTCTGT-CAT-------TGTC-T---TTGTCTGCATGGTTTTGTTTCTCTTTCATTTTGTTGG--ATTATG--TCAGTAAAGATCTCTAGATCTCTTCTTCAA--A--GTCTT-TA i chlSab2.chr12 I 3 C 0 s manLeu1.NW_012101680v1 69173 188 + 85016 TAAT-----------G---GAATGT-----GTCTTTGAAGCCCTGA-------ACAC-------------------------AGA-TACTTTTCTATTTATTTACTGAGCACTTAAGTTGGTTTT---CTGATTCTAATCAACATTT-TTCTGT-CGT-------TGTC-T---TTCTCTACATGGTTCTGCATATCTTTCATTTTGTTGA-CATTTTG--TCAGGAAAGATCTCTAGATCTCTTCGTCAA--A--GTCTT-TA i manLeu1.NW_012101680v1 I 3 I 15 s calJac3.chr18 46493483 183 - 47448759 AAAT-----------G---GAATGT-----GTCTTTGAAGCCCTGA---------AC-------------------------AGT-TACTTTTCTATTTATTTACTGAGCACTTAAGTTGGTTTT---CTGATTCTAATCAACATTT-TTCTGC-CAT-------TGCC-T---TTCTCTACATGGTTTTGTATCTCTTTCATTTTGCTGA-CATTATG--TCAGCAAAGATCTCTAGCTC---TCTTCAG--A--GTCTT-TA i calJac3.chr18 I 6 C 0 s saiBol1.JH378197 38025 188 + 8899380 AAAC-----------A---GAATGT-----GTCTTTGAAGTCCTCA-------ACAC-------------------------AGC-TACTTTTCCATATATTTACTGAGCACCTATGTTGGTTTT---CTGATTCTAATCAACATTT-TTCTGT-CAT-------TGTC-T---TTCTCTACATGGTTTTGTATCTCTTTCATTTTATTAA-CATCATG--TCAGCAAAGATTTCTAGTTCTCTTCTTCAA--A--GTCTT-TA i saiBol1.JH378197 I 319 C 0 s otoGar3.GL873538 19680978 222 - 27850971 gaatccaccatcctcg---gtgtat-----gtggccagcgccctaa-------tcactgagcgatgggtaccgCCCTACCATGGC-TACTTTTCTATTTATTTGCTGAGTACTTAAATTTGTTCT---CTCATTCTAATCAATATTT-TTCTCT-CAT-------TGTC-T---TTGGTTCTGTGGTTTTGCATCCCTTTCATTTTGTTAAAAACTGTG--CTTT---AGATCTCTAAATCTCTTCTTAAA--A--ATCTT-CA i otoGar3.GL873538 I 26 C 0 s canFam3.chr2 79144875 194 - 85426708 AAAA-----------A---AAATGT-----CTTTCTGATGTTCTGAAGCTCCCACTT-------------------------GGC-TTCCTTTCTGTTTATTTGCTGAGTGCTTAACTT-GTGCT---CTGATTC--GTCAATACTT-TCTCAT---T-------TAAC-TGTGTTCTCTGCATTGTTTTGCAT-CCCCTCACTTTACTAA-GAGTCTG--CTAGCCAAGATAT-TAGATTTCTTTTTAAAACA--GTCTCATA i canFam3.chr2 C 0 C 0 s dasNov3.JH570393 1783631 199 - 2296528 -AAT-----------GGAAGAATATTCCCAGTGTTTGAAACCCCCA-------CCAT-------------------------GGC-TTCCTCTCTGTTT-TTTGCTGAGACCTTAATTT-GTTCT---CTGAATCTGACCAATTGTT-TTCTCT-CATTTCACTATGTC-T---TTTTCTACATGGTTTTGCGCCCCTTTCATTT---TAA-CATTGTA--CTAGCAAAGGTCTCTAGATCTCTTCTTAAA--GCCATCTT-TA i dasNov3.JH570393 C 0 C 0 a score=20183.000000 s hg38.chr3_KI270784v1_alt 179632 28 + 184404 ---CGTCAACACA---TATCTCTGTCCCTTTCCT- s panTro5.chr3 75159 28 - 202621043 ---CGTCAACACA---TATCTCTGCCCCTTTCCT- i panTro5.chr3 C 0 C 0 s panPan2.chr3 69835 28 - 205426864 ---CGTCAACACA---TATCTCTGCCCCTTTCCT- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 88569 28 + 508821 ---AGTCAACACA---TATCTCTGCCTTTCCATT- i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79142216 28 + 117381234 ---AATCATCACA---TATCTGTCTCCACTTTCC- i nomLeu3.chr8 C 0 C 0 s macFas5.chr15 1464727 28 - 112612857 ---AATCATCACA---TATCTGTCTCCACCTTTC- i macFas5.chr15 C 0 I 1 s chlSab2.chr12 3720334 28 - 108555830 ---AATCATCACA---TATCTGTTTCCACCTTTC- i chlSab2.chr12 C 0 I 1 s calJac3.chr18 46493666 28 - 47448759 ---AATCCTCACA---TATCTCTCTGCTCCTTTC- i calJac3.chr18 C 0 I 1 s saiBol1.JH378197 38213 6 + 8899380 ---AATCAT-------------------------- i saiBol1.JH378197 C 0 I 1 s otoGar3.GL873538 19681200 31 - 27850971 ---AGTTTTAACACTTTATCTCCTTGCTTAATTC- i otoGar3.GL873538 C 0 I 3 s canFam3.chr2 79145069 29 - 85426708 ---GACTATTACA--TTATCGTTCTGCTGATTTC- i canFam3.chr2 C 0 I 1 s dasNov3.JH570393 1783830 35 - 2296528 AGAGACTGTTATACATTATCTCTCTGCTGATTTCC i dasNov3.JH570393 C 0 C 0 e cerAty1.NW_012005170v1 69555 15 + 97742 I e rheMac8.chrUn_NW_014858614v1 57247 15 - 85730 I e manLeu1.NW_012101680v1 69361 15 + 85016 I a score=236577.000000 s hg38.chr3_KI270784v1_alt 179660 32 + 184404 TTTTTTCTAAAA--CTGCCTGT-TTCCTTTttctc s panTro5.chr3 75187 32 - 202621043 TTTTTTCTAAAA--CTGCCTGT-TTCCTTTTTCTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 69863 32 - 205426864 TTTTTTCTAAAA--CTGCCTGT-TTCCTTTttctc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 88597 32 + 508821 ATTTTTCTAAAA--CTGCCTGT-TTCCTTTTCTTC i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79142244 32 + 117381234 TTTTTTCTAAAA--CTGCCTGT-TTTCTTTTTCTC i nomLeu3.chr8 C 0 I 37834 s rheMac8.chrUn_NW_014858614v1 57262 32 - 85730 TTTTTTCTAAAA--CTACCTGT-TTCCTTTTTCTC i rheMac8.chrUn_NW_014858614v1 I 15 N 0 s macFas5.chr15 1464756 32 - 112612857 TTTTTTCTAAAA--CTGCCTGT-TTTCTTTTTCTC i macFas5.chr15 I 1 C 0 s cerAty1.NW_012005170v1 69570 32 + 97742 TTTTTTCTAAAA--CTACCTGT-TTCCTTTTTCTC i cerAty1.NW_012005170v1 I 15 N 0 s chlSab2.chr12 3720363 32 - 108555830 TTTTTTCTAAAA--CTGCCTGT-TTTCTTTTTCTC i chlSab2.chr12 I 1 N 0 s manLeu1.NW_012101680v1 69376 32 + 85016 TTTTTTCTAAAA--CTACCTGT-TTCCTTTTTCTC i manLeu1.NW_012101680v1 I 15 N 0 s calJac3.chr18 46493695 32 - 47448759 TTTTTTCTAAAA--CTGCCTGT-TTCCTTTTTCTC i calJac3.chr18 I 1 N 0 s saiBol1.JH378197 38220 32 + 8899380 TTTTTTCTAAAA--CTGCCTGT-TTTCTTTTTCTC i saiBol1.JH378197 I 1 C 0 s otoGar3.GL873538 19681234 33 - 27850971 TGTTTTACATCT--CTGCCTGTATTATTTTCTCTC i otoGar3.GL873538 I 3 C 0 s canFam3.chr2 79145099 34 - 85426708 TTTCTTCTAAAGCTCTGCCTCT-TTCTTCTTCCTC i canFam3.chr2 I 1 I 1 s dasNov3.JH570393 1783865 34 - 2296528 TTTCTACTAAAGCTCTCCCTGT-TTCCTTTTTTTC i dasNov3.JH570393 C 0 C 0 a score=-1309.000000 s hg38.chr3_KI270784v1_alt 179692 1 + 184404 -a s panTro5.chr3 75219 1 - 202621043 -A i panTro5.chr3 C 0 C 0 s panPan2.chr3 69895 1 - 205426864 -a i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 88629 1 + 508821 -A i gorGor5.CYUI01015884v1 C 0 C 0 s macFas5.chr15 1464788 1 - 112612857 -A i macFas5.chr15 C 0 I 43407 s saiBol1.JH378197 38252 1 + 8899380 -A i saiBol1.JH378197 C 0 I 19532 s otoGar3.GL873538 19681267 1 - 27850971 -A i otoGar3.GL873538 C 0 N 0 s dasNov3.JH570393 1783899 1 - 2296528 C- i dasNov3.JH570393 C 0 C 0 e canFam3.chr2 79145133 1 - 85426708 I e nomLeu3.chr8 79142276 37834 + 117381234 I a score=-1933.000000 s hg38.chr3_KI270784v1_alt 179693 3 + 184404 -gga s panTro5.chr3 75220 3 - 202621043 -GGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 69896 3 - 205426864 -gga i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 88630 3 + 508821 -TGA i gorGor5.CYUI01015884v1 C 0 C 0 s canFam3.chr2 79145134 2 - 85426708 --GA i canFam3.chr2 I 1 N 0 s dasNov3.JH570393 1783900 3 - 2296528 CTG- i dasNov3.JH570393 C 0 C 0 e saiBol1.JH378197 38253 19532 + 8899380 I e macFas5.chr15 1464789 43407 - 112612857 I e nomLeu3.chr8 79142276 37834 + 117381234 I a score=2242.000000 s hg38.chr3_KI270784v1_alt 179696 7 + 184404 g-atctg-g s panTro5.chr3 75223 7 - 202621043 G-ATCTG-G i panTro5.chr3 C 0 C 0 s panPan2.chr3 69899 7 - 205426864 g-atctg-g i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 88633 9 + 508821 GAATCTGTG i gorGor5.CYUI01015884v1 C 0 C 0 s dasNov3.JH570393 1783903 7 - 2296528 G-ATTTA-G i dasNov3.JH570393 C 0 N 0 e saiBol1.JH378197 38253 19532 + 8899380 I e macFas5.chr15 1464789 43407 - 112612857 I e nomLeu3.chr8 79142276 37834 + 117381234 I a score=768048.000000 s hg38.chr3_KI270784v1_alt 179703 1578 + 184404 ttgtataatagggtgtgccacctccttcgtctcattgccccttgatattctggtatgattgggtggcttcctgagtcctgcagaatcatgggccgattaaagctcttttctttatGATCATAGAGAATATTAG--tactgcaaagtggagctatcagatgtcttcaaggccttttccctgttgtcttgacaatcagcactcagcttcttttcattcaagtatctgaagccttcttgaatttttcccctcaaaatggacttgtcttcctttaccacattgccaggc-tgcaacaaagatagctga-taatgcagaagcaagtt--cagaaggggctagcaaacagaggtcaggagagtttggagggctttgaagacaggaagatgagggaaag-tttggatctttgt-aaagaattgttaaatactcgtgatcaaaagcctgac-aggaaaatggacagtaaa-ggccagacttagaaggtctcagatgaaaatgaggaacttactaggaacagaagc-caagggtacttttgatttgctgtagcagagaacatggcttcacggcgaccctgccctggagatctgtgatataggc--tccagcctacagggtcggtgggttttctcccatatgtggagacaagaaagtgt-agaaatgaagacacaagacaaagagataaaagaaaagacagctgggtccaggggaccactaccacc-aagatgcggagactggta-gtggccctgaatgcctggctgcactgttatttatgggatacaaagcaaaaggggcaggataatgagtgtg-agccatctccaatgataggt-aaggtcacgtggg-tcatgtgtccactggacagggggcccttccc-tgcctggcagccaaggca-gagagaggg-gggagagagaga-gacagcttacaccattatttct-gcgtattagagacttttagtactttcactaattttgctactgttatctaa-aaggcagagctaggtg-tacagggtggaaaatgaaagcggactaggagcgtgaccactgaagcata-gcatcacagggagacggttaggcctccggataactgcgggtgggcct--gacatcagtcaggccctccacaagaagtggaggagtagaatcttctctaaactccccaggggaaag-ggagactccctttcctggtctgctaagtagtg-ggtgtttttccttgacactgatgctactgctagaccacagtccgcttggcaacgggcgt-cttcccagacgct-ggcgtcacc-gctagaccaaggagccctctggtggccctgtccgggcatgaca--gaaaagctcgcactc--gtcttcggtcacttctcactatgtgccctcagctcctgtctctgtatggcctggctttt-cctaggttatgattatagagcgaggattattataatattggaataaagagtcattgctacaaactaatg-atgaatgatattcatagataatcatgtctatgatctagatctagtataactcttgttgttttatatattttattatactggaacagctcgtgccctcagt---ctcttgcctcggcacctggatgacttgccgtccgca s panTro5.chr3 75230 1581 - 202621043 TTGTATAATAGGGTGTGCCACCTCCTTCGTCTCATTGCCCCTTGATATTCTGGTATGATTGGGTGgcttcctgagtcctgcagaatcatgggctgattaaagctcttttctttatGATCATAGAGAATATTAG--TACTGCAAAGTGgagctatcagatgtcttcaaggccttttccctgttgtcttgacaatcagcactcagcttcttttcattcaagtatctgaaggcttcttgaattttccccctcaaaatggacttgtcttcctttaccacattgccaggc-tgcaacaaagatagctga-taatgcagaagcaagtt--cagaaggggctagcaaacagaggtcaggagagtttggagggctttgaagacaggaagatgagggaaag-tttggatctttgt-aaagaattgttaaatacttgtgatcaaaagcctgac-aggaaaatggacagtaaa-ggccagacttagaaggtctcagatgaaaatgaggaacttactaggaacagaagc-caagggtacttttgatttgctgtagcagagaacatggcttcacggcgaccctgccctggagatctgtgatgtaggc--tccagcctacagggtcggtgggttttctcccatatgtggagacgagaaagtgt-agaaatgaagacacaagacaaagagataaaagaaaagacagctgggtccaggggaccactaccacc-aagatgcggagactggta-gtggccctgaatgcctggctgcactgttatttatgggatacaaagcaaaaggggcaggataatgagtgtg-agccatctccaatgataggt-aaggtcacgtggg-tcatgtgtccactggacagggggcccttccc-tgcctggcagccaaggca-gagagagagcgggagagagaga-gacagcttacaccattatttct-gcatattagagacttttagtactttcactaattttgctactgttatctaa-aaggcagagccaggtg-tacagggtggaaaatgaaagcggactaggagcgtgaccactgaagcaca-gcatcacagggagacggttaggcctccggataactgcgggtgggcct--gacatcagtcaggccctccacaagaggtggaggagtagaatcttctctaaactcccccggggaaag-ggagactccctttcctggtctgctaagtagtg-ggtgtttttccttgacacagatgctaccgctagaccacagtccgcttggcaacgggcgt-cttcccagacgct-ggcgtcacc-gctagaccaaggagccctctggtggccctgtccgggcatgaca--gaaaagctcgcactcttgtcttcggtcacttctcactatgtgccctcagctcctgtctctgtatggcctggctttt-cctaggttatgattatagagcgaggattattataatattggaataaagagtcattgctacaaactaatg-atgaatgatattcatagataatcatgtctatgatctagatctagtataactcttgttgttttatatattttattatactggaacagctcgtgccctcggt---ctcttgcctcggcacctggatgacttgccgtccgca i panTro5.chr3 C 0 C 0 s panPan2.chr3 69906 1581 - 205426864 ttgtataatagggtgtgccacctccttcgtctcattgccccttgATATTCTGGTATGATTGGGTGgcttcctgagtcctgcagaatcatgggctgattaaagctcttttctttatgaTCATGGAGAATATTAG--tactgcaaagtggagctatcagatgtcttcaaggccttttccctgttgtcttgacaatcagcactcagcttcttttcattcaagtatctgaaggcttcttgaattttccccctcaaaatggacttgtcttcctttaccacattgccaggc-tgcaacaaagatagctga-taatgcagaagcaagtt--cagaaggggctagcaaacagaggtcaggagagtttggagggctttgaagacaggaagatgagggaaag-tttggatctttgt-aaagaattgttaaatacttgtgatcaaaagcctgac-aggaaaatggacagtaaa-ggccagacttagaaggtctcagatgaaaatgaggaacttactaggaacagaagc-caagggtacttttgatttgctgtagcagagaacatggcttcacggcgaccctgccctggagatctgtgatgtaggc--tccagcctacagggtcggtgggttttctcccatatgtggagacgagaaagtgt-agaaatgaagacacaagacaaagagataaaagaaaagacagctgggtccaggggaccactaccacc-aagatgcggagactggta-gtggccctgaatgcctggctgcactgttatttatgggatacaaagcaaaaggggcaggataatgagtgtg-agccatctccaatgataggt-aaggtcacgtggg-tcatgtgtccactggacagggggcccttccc-tgcctggcagccaaggca-gagagagagcgggagagagaga-gacagcttacaccattatttct-gcatattagagacttttagtactttcactaattttgctactgttatctaa-aaggcagagccaggtg-tacagggtggaaaatgaaagcggactaggagcgtgaccactgaagcaca-gcatcacagggagacggttaggcctccggataactgcgggtgggcct--gactgatgtcaggccctccacaagaggtggaggagtagaatcttctctaaactcccccggggaaag-ggagactccctttcctggtctgctaagtagtg-ggtgtttttccttgacactgatgctaccgctagaccacagtccgcttggcaacgggcgt-cttcccagacgct-ggcgtcacc-gctagaccaaggagccctctggtggccctgtccgggcatgaca--gaaaagctcgcactcttgtcttcggtcacttctcactatgtgccctcagctcctgtctctgtatggcctggctttt-cctaggttatgattatagagcgaggattattataatattggaataaagagtcattgctacaaactaatg-atgaatgatattcgtagataatcatgtctatgatctagatctagtataactcttgttgttttatatattttattatactggaacagctcgtgccctcggt---ctcttgcctcggcacctggatgacttgccgtccgca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 88642 1594 + 508821 TTGTATAATAGGGGTGGCCACCTCcttcgttc--ttgccctt--atattctggtatgattgggtggcttcctgagtcctgcagaatcatgagccgattaac-ctcttttctttatgaT--TAGAGAATATTAAgttactgcaaagtggatctatcaaatgtcttcaa-gccttttccctgttgtcttgacaatc-gcactcagcttcttttcattcaagtatctgaagccttcttgaattttccccctcaaaatggacttgtcttcctttacca-attgccaggcatgcaacaaagatagctgattaatgcagaagcaagttgccagcaggggctagcaaacagaggtcaggagag-ttggagggcttttggaagacggagatgagggaaagttttggatctttgtaaaagaattgttaaatacttgtgatcaaaagcctgacgaggaaaatggacagtaaagggccagac-tagaaggtctcagatgaaaatgaggaacttactaggaacagaagcacaagggtacttttgatttgctgtagcaaagaacatggcttcacggcgaccctgccctggagatctgtgatgtaggctttccagcc-acagggtcagtgggttttctcccgtatgtgga-acgag-aagtgtgagaaatgaattaccaagacaaagag-taaaagaaaagacagctggctccaggggaccactaccaccaaagatgcggagactggtaggtggccctgaatgcctggctgcacgattatttattgattacaaagcaaaa-gggcaggataatgagtgtgaagccatctccaatgataggtaaaggtcacgtgggttcatgtgt-cactggacagggggccctttccatgcctggcagccgaggcaggacggagagggggagagaaggatgacag-ttacaccattatttctggcatattagagacttttagtactttcactattttggctactgttatctaataaggcagagccagttgatacagggtggaaaatgaaagcgactaaggagcgtgaccactgaagcacaggcatcacagggagacggttaggcctccggataactgcgggcgggccttgacctgatgtcaggccc-ccacaaga-gtggaggagtagagtcttctctaaactcccccgggaagagaggagactccctttactggtctcgctagtagtgtggtgtttttcttggaca-tgatgctaccgctagaccacggtcca-ttggcaacgggcatacttcccagacactgggcgtcaccggctagaccaaggag-cctctggtggccctgtctgggcatgacaaggaaaagctcacactcttgtcttcggtca-ttctcactatgtgtcctcagcccctgtctctgtatagcgtggcttttccctaggttatgatttataggcgaggattattataatattggaataaagagtcattgctacaaactaatgcatgaatgatattcatagataatcatgt-tatgatctagatctagtataactcttgttgttttatatattttattatactgg-acagctcgtgccctccgtgtcttcttgcctaggcacctggatgacttgccgtccaca i gorGor5.CYUI01015884v1 C 0 C 0 e saiBol1.JH378197 38253 19532 + 8899380 I e macFas5.chr15 1464789 43407 - 112612857 I e nomLeu3.chr8 79142276 37834 + 117381234 I a score=35921.000000 s hg38.chr3_KI270784v1_alt 181281 33 + 184404 ctgtgaaa-ctttgaacttgagggtgatgactta s panTro5.chr3 76811 33 - 202621043 ctgtgaaa-ctttgaacttgagggtgatgactta i panTro5.chr3 C 0 C 0 s panPan2.chr3 71487 33 - 205426864 ctgtgaaa-ctttgaacttgagggtgatgactta i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 90236 34 + 508821 ctgtgaaacctttgaacttgagggtgatgactta i gorGor5.CYUI01015884v1 C 0 I 25 s macFas5.chr15 1508196 33 - 112612857 ctctgaaa-ctttgaacttgaggctgaagatttt i macFas5.chr15 I 43407 C 0 s saiBol1.JH378197 57785 33 + 8899380 ccatgaaa-ctttgcacttgagggtgacaattta i saiBol1.JH378197 I 19532 C 0 e nomLeu3.chr8 79142276 37834 + 117381234 I a score=19024.000000 s hg38.chr3_KI270784v1_alt 181314 27 + 184404 gtgcatgtctggtggaatgaacttcta s panTro5.chr3 76844 27 - 202621043 gtgcatgtctggtggaatgaacttcta i panTro5.chr3 C 0 C 0 s panPan2.chr3 71520 27 - 205426864 gtgcatgtctggtggaatgaacttcta i panPan2.chr3 C 0 C 0 s macFas5.chr15 1508229 27 - 112612857 gggtgtatctggtggaatgaacttcta i macFas5.chr15 C 0 C 0 s saiBol1.JH378197 57818 27 + 8899380 gggtgtatctattggaaataacttcta i saiBol1.JH378197 C 0 C 0 e nomLeu3.chr8 79142276 37834 + 117381234 I e gorGor5.CYUI01015884v1 90270 25 + 508821 I a score=929761.000000 s hg38.chr3_KI270784v1_alt 181341 1029 + 184404 ggcagcaaagctcaagatgtgtcctgtctg---catcaaacagc--ctgtg-cttttatgtgtgac-tgaggcagtgacctctgattcg--gacttata--ttaaatg--agtcccaactcttatattaaatgagaagcaa--actcaaaag---tttggaaaatttgcagcctggc-caattggtcaaaaagaaaagctgattttcaggggaaaaattctgg-aagggttcagaaatt-tgcataaaaaggagtcc--agtgctagtag-ccaagacaataggaaaaaggccttgaaggcatttcagagacatttacagcagcc--cttgctgtcacaggccctggggcctaggagagaagtatggttt-cctg-ggccagtcccatgatctccct-ctatgtgcagcctcagg----acactgctgcctgcatccctg------cagctccagctgcagctccagccatggctgaaagatgcacagatacag-cctgtgtcactgcttcagaggatgtgagctagaagccttg-gtaacttcctcatagtgttaagccactaggtgg-acagagcatgagactagaggcttgggag-cctctg-tatagattttgg--aagatgtatggaaatgcctgggtgtccaggcaaaa-gcatccccaaa-aggcagagcctcataagaaacctctactagagcagtgccaaaggaaaatatgg-ggttggag-cccccacactggaggctaccatcatgcagaccccagatttatagaacacccccctcccaacagcttgtaccatcagtggggaaaag--ctacaggcactcaatgccagcccagcccatgagggcagccgtggggtgtaaactctgcaaagccacagg-tgcagagctgcccaaggccttgggagcccagccctcacac--ccttgtgccctggatgtgggaca-aggtttcaaaaagggtgattttggagctttaggattgaat-gactggccttctgggtt-----------tggaga--ctgtaagtcctatctgtgctttg---ttctttctggcaaaatcctcccttttggctggtaatgcttaccc s panTro5.chr3 76871 1029 - 202621043 ggcagcaaagctcaagatgtgtcctgtctg---catcaaacagc--ctgtg-cttttatgtgtgac-cgaggcaatgacctctgattca--gacttata--ttaaatg--agtcccaactcttatattaaatgagaagcaa--actcaaaag---tttggaaaatttgcagcctggc-caattggtcaaaaagaaaagctgattttcaggggaaaaattctgg-aagggttcagaaatt-tgcataaaaaggagtcc--agtgctaatag-ccaagacaataggaaaaaggccttgaagtcatttcagagacatttacagcagcc--cttgctgtcacaggccctggggcctaggagagaagtatggttt-cctg-ggccagtcccatgatctccct-ctatgtgcagcctcagg----acactgctgcctgcatccctg------cagctccagctgcagctccagccatggctgaaagatgcacacatacag-cctgtgtcactgcttcagaggatgtgagctagaagccttg-gtaacttcctcatagtgttaagccactaggtgg-acagagcatgagactagaggcttgggag-cctctg-tatagattttgg--aagatgtatggaaatgcctgggtgtccaggcaaaa-gcatccccaaa-aggcagagcctcataagaaacctctactagagcagtgccaaaggaaaatatgg-ggttggag-cccccacactggaggctaccatcatgcagaccccagatttatagaccacccccctcccaacagcttgtaccatcagtggggaaaag--ctacaggcactcaataccagcccagcccatgagggcagccgtggggtgtaaactctgcaaagccacagg-tgcagagctgcccaaggccttgggagcccagccctcacac--ccttgtgccctggatgtgggaca-aggtttcaaaaagggtgattttggagctttaggattgaat-gactggccttctgggtg-----------tggaga--ctgtaagtcctatctgtgctttg---ttctttctggcaaaatcctcccttttggctggtaatgcttaccc i panTro5.chr3 C 0 C 0 s panPan2.chr3 71547 1027 - 205426864 ggcagcaaagctcaagatgtgtcctgtctg---catcaaacagc--ctgtg-cttttatgtgtgac-cgaggcaatgacctctgattca--gacttata--ttaaatg--agtcccaactcttatattaaatgagaagcaa--actcaaaag---tttggaaaatttgcagcctggc-caattggtcaaaaagaaaagctgattttcaggggaaaaattctgg-aagggttcagaaatt-tgcataaaaaggagtcc--agtgctaatag-ccaagacaataggaaaaaggccttgaaggcatttcagagacatttacagcagcc--cttgctgtcacaggccctggggcctaggagagaagtatggttt-cctg-ggccagtcccatgatctccct-ctatgtgcagcctcagg----acactgctgcctgcatccctg------cagctccagctgcagctccagccatggctgaaagatgcacacatacag-cctgtgtcactgcttcagaggatgtgagctagaagccttg-gtaacttcctc--agtgttaagccactaggtgg-acagagcatgagactagaggcttgggag-cctctg-tatagattttgg--aagatgtatggaaatacctgggtgtccaggcaaaa-gcatccccaaa-aggcagagcctcataagaaacctctactagagcagtgccaaaggaaaatatgg-ggttggag-cccccacactggaggctaccatcatgcagaccccagatttatagaccacccccctcccaacagcttgtaccatcagtggggaaaag--ctacaggcactcaataccagcccagcccatgagggcagccgtggggtgtaaactctgcaaagccacagg-tgcagagctgcccaaggccttgggagcccagccctcacac--ccttgtgccctggatgtgggaca-aggtttcaaaaagggtgattttggagctttaggattgaat-gactggccttctgggtg-----------tggaga--ctgtaagtcctatctgtgctttg---ttctttctggcaaaatcctcccttttggctggtaatgcttaccc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 90295 1053 + 508821 agcagcaaagctcaagatgtgtcctgtctggactatcgaacagccactgtgacttgtatgtgtgacgcgaggaatagacctctgattaggtgacttataatgtaaacggaagtccc-acttttatatt-aatgagaagcaaatactcaaaaagtttgtggaaaatttgc-gcctggcacagttggtcaaaaagaaaagctgattttcagggggaaaattctggaaagggttcagaaattgtgcataaaaaggagtcccagttgctaata--ccaagacaataggaaaaagg-cttgaaggcatttcagagacatttacca-agccagcctgctgtcacaggccct-gggcccaggagagaagtatggtttgcctgtggccagt-tcatgatct-cct-ctatgtgcagcctcagggagagcagtgctgct----cccctg------cagctccagctccagctccagccatggctgaaagatgcaca-gtacagccctgtgtcactgcttaggacggtgcgagctagaagccttgagtaacttctctatagtgtt-agccactaggtggaacagagcatgagactaga-gcttgggagccctctgttatagattttgggaagaatgtatgtaaatgcttgggtgtccagacaaagtgcatccccaaataggcagagcctcataagaaacctctactaaggcagtg-caaaggaaaatatggcggttggagccccccgcactggaggctaccatcatgcagaccccagatttatagaccacccccc-cccaacagcttgtaccatcagtgggggaaaagcttacaggcactcaataccagcccag-ccatgagggcagccgtggggtggaaactctgcaaagccacaggatgcagagctgcccaaggccttgggagcccagccctcacag--ccctgtgccctggatgtgggaca-a-gtttcaaaaagggtga-tttggagtcgtaggattgaatggactggcct--tgggtt-----------tggagagcctgtaagtcctatctgtgctttg---ttc-ttctggcaaatccttcccttttggctgggaatgcttaccc i gorGor5.CYUI01015884v1 I 25 C 0 s macFas5.chr15 1508256 1022 - 112612857 agcagcaaagctcaagagttgtcttaccta---cctcgaacaac--ctgtg-gtattatatgtggc-caaagaaatgaccttaagttgg--aatttgta--t------------------------ttaaatgagaagcaga-gcttaaacc---tttggaaaatttgcaacctggc-caagtggtcaaaaagaaaagctgattttcagggggaaaattcaag-aaggcttcggatatt-tgcataaaaaggatccc--agtgctaataattcaagacaatgggaaaaaggccttgaaggcatttcagagatcttcctagcagcc--cttgctgtcactagccctggggcttaggagaaaagaatgtttt-cctg-ggccagacccatgaccccactgctctgtgcagcctcagg----acactgctccctgcacccctacacctccatctccagctctagctccagccatggctgaaagatgcacaggtacag-cttgggtcactgcttcag-gggtgtaagctccaagtcttg-gtggcttccatgtactgtcaaaccagcaggtgc-ccagagcacaaaactagaggcttcggag-ccttca-tctagactccaa--aagatgtatgggaaagccttggtgtccaggcagaa-gcttttccaac-aggcagagcctcacagtaaacctctgctcgggcattaaagaagaagcatatag-ggttggag-cccccatacaggcaggcactattttccagaccccagattcataga-------cccaccaacagcttgcacccttagtgttgaaaag--ctactggcactcaatagcagcccagcccatgagggca--ctttgaggaaagaccccgccatgccacagg-tgcagagctgcccaagaccttgggagcccagccatcacaccacactgtgctctggatgtgggacgtagattcaaaaaaagatga-tttggagctgtaggatggaat-gactggcctgctggatttttgacttgcatggagt--ctgtaagtcctatctgtgttttgtgcttctttatggcaaatttcttctttttggctgggaatgcttaccc i macFas5.chr15 C 0 C 0 s saiBol1.JH378197 57845 988 + 8899380 ggcaccaaaactcaagaggtgtcctgtctg---tgtc---------atgtg-gtcttatgtttgac-cagataaatgacctcaagttga--aacttcta--t------------------------ttaaatgataagcaga-gcttaaaag---tttgg-aaatctgcaacctggc-caagtgatcaaaaagaaaagctgattttcagtgggaaaattcaag-acagcttcagaaatg-tgtataaaatggagtcc--agtgttaatag-tcaagacagtgggaaaaagacatcgaaggcctttgagacacatttgcagctgcc--cttgccttcacaggccctgaggcccaggacagaacaatggttt-cctg-ggccagccccatggccctgctgctgtgtgcagcctcagg----acactgctgcctgcatccctg------cagctcc------agctttagccatggctgaaaggtgcacaggtacaa-cttgggccactggttaagtgtgagaaagcatcaagccata-gtggcttccatatagtgttaagccaacaagtgc-acagagcacaagactagaggcttgagag-ccttca-tctagactccag--agtatgtacagaaaaacctgggcattcagacagaa-gcttttccaa--gggcagggcctcatgggaaacctctattcaggcattac----agagagtataa-gacgggag-tccccataaagggatgcagcattttccagacaccagatt-ataga-------cccaccaagagcatgcacccttaatgtt-ataag--ctgcaggcactcaacatcagcccagcccatgagggcacctgtggaggataaaccctgcagagccacagg-tacagagctgctcaatgccttgggagcccagccatcacatcgccctgtgctctggatgtgggacg-tagattcaaacaagatgattatggagctgtaggattgcat-gactggcctactgggtttttgacttgcatggggt--ctgtaagtttcatgtgc---------ttctttctggcaaatttcttccttttggctgggaatgcttatgc i saiBol1.JH378197 C 0 C 0 e nomLeu3.chr8 79142276 37834 + 117381234 I a score=330126.000000 s hg38.chr3_KI270784v1_alt 182370 262 + 184404 attgcc-tgt-gca-agtactgtgctttggaagtagttaacttgctttatatttcagaggctcatgggcctaagggactgtagcct--tgtgtcaga--tgacactttaagctttggacatttgtataaatgctggaacgatgtaagactttaggggactgtagggaaggcatcattgtattttgcaatgtga-----gaaggacatgagattttaggagtca-gggacagaataataaaatttagctctgtgtccctgccaaaactcatgtgga s panTro5.chr3 77900 262 - 202621043 attgcc-tgt-gca-agtactgtgctttggaagtagttaacttgctttatatttcagaggctcgtgggcctaagggactgtagcct--tgtgtcaga--tgacactttaagctttggacatttgtataaatgctggaatgatataagactttaggggactgtagggaaggcatcattgtattttgcaatgtga-----gaaggacatgagattttaggagtca-gggacagaataataaaatttagctctgtgtccctgccaaaactcatgtgga i panTro5.chr3 C 0 C 0 s panPan2.chr3 72574 262 - 205426864 attgcc-tgt-gca-agtactgtgctttggaagtagttaacttgctttatatttcagaggctcgtgggcctaagggactgtagcct--tgtgtcaga--tgacactttaagctttggacatttgtataaatgctggaatgatataagactttaggggactgtagggaaggcatcattgtattttgcaatgtga-----gaaggacatgagattttaggagtca-gggacagaataataaaatttagctctgtgtccctgccaaaactcatgtgga i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 91348 273 + 508821 attgctgtat-gcatagtactgtgctttggaagtagttaacttgctttatatttcagaggctcatgagcctaagggactgtagccttatgtgtcagcattgacactttaagctatggacatttgtataaatgctggaatgatataagactttaggggactgttagggaaggatacttgtattttgcaatgttagtaaggaaggacatgaattttagggagtcacgggacag-aTAATAAAAATTTACTCTGTGTCCCTGCAAAAACTCATGTGGA i gorGor5.CYUI01015884v1 C 0 I 7 s nomLeu3.chr8 79180110 227 + 117381234 ATtgcc-tgcaaca-agcattgtaccttggaagtagttaacttgctttatagttcagaggctcatgtgcctaagggactgtagcct--tgtgtcaga--tgagactttaagctttggacatttgtataaatgctggaatgatacaagatttggggggactgtaaggaaggcatcattgtattttgtaatgtga-----gaaggacatgagattt-gggagcca-gggacagaaTAATAAA----------------------------------- i nomLeu3.chr8 I 37834 C 0 s macFas5.chr15 1509278 250 - 112612857 aatgcc-tga-aca-atcattgtatcttggaagtagttaactt------------agaggcttgggggcagaagggactgtagcct--tgtctcaga--tgagacttcaggctttggacatgtgagtaaatgctggaatgagttaagactttggtggactgtagagaagacatcattgaattttgcagtgtga-----gaacgacatgagatttcgggggcca-ggggcagaataatatgatctggctctgtgcccctaccaaaactcatgtgta i macFas5.chr15 C 0 C 0 s saiBol1.JH378197 58833 251 + 8899380 aatgcc-tgt-aca-a---------tacaaagcaagataacttgctttgcatgtcagaagctcagaggcagaagagactgtagcc---tgtttcaga--tgagactttgggctttggacatttcagtaaatgctggaatgaattaagatattgggagactgtagagaagacatcattgtattttgcagtgtga-----gaatgacataagatta-gggggcca-ggggAGGAGtaatatgatttggccctgtgtccctaccaaaagtcatgtgga i saiBol1.JH378197 C 0 C 0 a score=6676.000000 s hg38.chr3_KI270784v1_alt 182632 10 + 184404 attgtagtcg s panTro5.chr3 78162 10 - 202621043 attgtaatcg i panTro5.chr3 C 0 C 0 s panPan2.chr3 72836 10 - 205426864 attgtaatcg i panPan2.chr3 C 0 C 0 s macFas5.chr15 1509528 10 - 112612857 attgtaatgg i macFas5.chr15 C 0 C 0 s saiBol1.JH378197 59084 10 + 8899380 attgtaatgt i saiBol1.JH378197 C 0 C 0 e nomLeu3.chr8 79180337 0 + 117381234 C e gorGor5.CYUI01015884v1 91621 7 + 508821 I a score=730235.000000 s hg38.chr3_KI270784v1_alt 182642 565 + 184404 ggattgttaaaggtggg-gcatggtggaaggtgatttaatcatggtggGGAGTGGGGGTTGGAAGGTGGGGGCATAGGGAAAATG-GGGGACTAtggtgggggtgaggggtgaaaagtgg---cga-gggggtggacccttcacaaatgattaaacaccatctccttattgctgtccttgtgatagtgagttatcttcatgattttggagctgtgagattgaatggatactgggcttctggg-tttggactt-gcattgggcctgtggtcccatttgtgtta-ttttcccaggaaatttcttccctttggattgagaaagcttacccaatgcctttaccatcaccgtaccttgaaagaaaagaactcccttttacattcagggactcataggc-aaagggactgtagccttgtctcagatgagatgtggaa-ttgttacatttgcattaatgctggaatgattgaagacttttgggaacttttgtaaaggcttgattgtattttgctctgtgagaaggacatgagattcagtgggctcagggTTTGAAtaatatggtttgtctgtgtttccctaga s panTro5.chr3 78172 566 - 202621043 ggattattaaaggtggg-gcatggcggaaggtgatttaatcatggtggGGAGTGGGGGTTGGAAGGTGGGGGCATAGGGAAAATG-GGGGATTAtggtggcggtgaggggtgaaaagtgg---tgaggggggtggatccttcacaaatgattaaacaccatctccttattgctgtccttgtgatagtgagtTATCTTCatgattttggagctgtgagattgaatggatactgggcttctggg-tttggactt-gcattgggcctgtggtcccatttgtgtta-ttttcccaggaaatttcttccctttggattgagaaagcttacccaatgcctttaccatcaccgtaccttgaaagaaaagaactcccttttacattcagggactcataggc-aaagggactgtagccttgtctcagatgagatgtggaa-tttttacatttgcattaatgctggaatgattgaagacttttgggaacttttgtaaaggcttgattgtattttgctctgtgagaaggacatgaaattcagtgggctcagggTTTGAAtaatatggtttgtctgtgtttccctaga i panTro5.chr3 C 0 C 0 s panPan2.chr3 72846 566 - 205426864 ggattgttaaaggtggg-gcatggcggaaggtgatttaatcatggtggGGAGTGGGGGTTGGAAGGTGGGGGCATAGGGAAAATG-GGGGATTAtggtggcggtgaggggtgaaaagtgg---tgaggggggtggatccttcacaaatgattaaacaccatctccttattgctgtccttgtgatagtgagttatcttcatgattttggagctgtgagattgaatggatactgggcttctggg-tttggactt-gcattgggcctgtggtcccatttgtgtta-ttttcccaggaaatttcttccctttggattgagaaagcttacccaatgcctttaccatcaccgtaccttgaaagaaaagaactcccttttacattcagggactcataggc-aaagggactgtagccttgtctcagatgagatgtggaa-tttttacatttgcattaatgctggaatgattgaagacttttgggaacttttgtaaaggcttgattgtattttgctctgtgagaaggacatgaaattcagtgggctcagggTTTGAAtaatatggtttgtctgtgtttccctaga i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 91628 543 + 508821 GGATTGTTAAAGGTGGGAGCATTGGTGAA-GTGATTTAATCATGGTGGAG---GGGGGTTGGAAGGTGGGGG--TAGGGAAAATG-GGGGATTAtggtgggggtgaggggtgaaaagcgg---tgg-gggggtggatccttcacaaatgattaaacaccatctccttattgctgtgcttatgatagtgagttatcttcatgattttggagctgtgagattgaatggatactgg--ctctggg-tttggactt-gcattggg--tgtggttctatttgtgtt--ttttcctgggaaattt-ttccctttgaattgagaaagcttacccaatgcctgtaccatcattgtaccttgaaagaagagaactcctttt--aattcagggactcatagtg-caagggactgtagccttgtctcagatgagatgttgaactttttacatttgagttaatgctggaatga-tgaagactttt-ggaacttttgaaaaggcatgaatgtattttgctctgtgagaaggacatgagattctg-ggtatcaggg--TGAAtaatatggtttgtctgtgtttcc----- i gorGor5.CYUI01015884v1 I 7 C 0 s nomLeu3.chr8 79180337 565 + 117381234 -----GTTAAAGGTGGG-GCCTGGTGGAGGGTGATTTAATCATGGTGGAGAGTGGGGGTTGGAAAGTGGGGG-GTAGGGAGAATGAGGGGATTATCGtgggggtgaggggtgaaaagtgg---tggtgggggcggatccttcacaaatgattaaacaccatctccttattgctgtgcttatgatagtgagtTCTCTTCatgattttggagctgtgagattgaatggatactggcctcctaggttttagacttggcattgggcatgtagttctacttgtgttt-ttttcctgggaaatttcttccctttgaattgagaaagcttacccaatgcctgtaccatcattgtaccctgaaagaaaagaacatccttttaagctcagggagtcataggtgaaagggactgtagacttgtctcagatgagatgttgaactttttacatttgagttaattctggaatgagttaagacttttggaaactttagaaaaggcatgaatgtattttgctctgtgagaaggacatgagattctggggtatcagggtcagaataatatggtttggctgtgtttctttacc i nomLeu3.chr8 C 0 C 0 s macFas5.chr15 1509538 544 - 112612857 ggaatgttaaagctggg-gcttggtggaaggtgatttaatcatggtggACAGTGGGGTTTGGAA-GTGTGGGTGGGGGAAGAAtg-ggggttcatggtgggggtg-gtcgtgaagcacgg---agacagggacagatccttcacaaatggttaaacactatctccttaatgctgtctgtgtgatagtgagttct-----------------tgtga---TAaatgaattctctcctgctggcttttgggctt-gcactgggcctgt-gtcccagttgtgtta-tttttctgggaaaatc-ttcccttgggattgagaaagcttacccagtgcctgtaccatcattgtaaattgaaagaaaagaactcccttgtacattcagggactcataggcagaatggattgcagtctcgtcttggatgaaacttgaac-ttattgcatttgagttactggtggaataagttaaaactattggaaacttttcaaaaggcatgtttgtattttgctctgtgagaaggacatgagatttggggatgtcaggattagaataatatggtttgactgtgtttacctaca i macFas5.chr15 C 0 I 6513 s saiBol1.JH378197 59094 547 + 8899380 ggaatgttaaaggtggg-tcttgatggaaggtgatttaatcatggTTGACAGTGGGAGTTAGAA-GTGAGGGTGTAGGAAGTTTGAGGGGGTTATGGTGGGGTTG-GGAGTAAAAGATGGGGCTGGCGGGGGCCGATCCTTTGCAGATAACTGAACACTGTCTTTTTAATGCTGTCTGTGTAATAATGAGTTCT-----------------CGTGG---TGAATAAATactgtcctgctgggttttggacat-gcactgggcctgt-gtctcaattctgttattttttctgaaaaatttcttcccattggacttagcaagcttacccaatgtgtataccatcattgtatcttgaaaagaaggaactcccttttaaattcagagacttacagga-gaagggactgtagcattgtcttggatgagactttgaactttttgcatttgagttactgctggaatgagttaagaattttggaaa--tttgaaataacttgtttgtatttccctctgtgagaaggacatgagattcag-agtgtcagggtcagaataatgtggttttgctgtgtttccctact i saiBol1.JH378197 C 0 C 0 a score=934246.000000 s hg38.chr3_KI270784v1_alt 183207 643 + 184404 aaaactcaagt-gaattgtaatcctgaatgttggaggtggggcctggtgggaggtgatttaatcatga-caggagggtgttGGGGT--GGAAGAAAAAGGAGTGGGTAGGGTAGGGAGGAGTATGTTGGCAGTAGGGTGGTGAGAGGGTA-GGGGTAGCAGGAAGGGGG----GTAACctgctgcagaggcagaggctcatgggaaacctctactagggcagtgcacctgtggctttgcaggctttagcccccatggctgctctcatgggctgggttggtgtggagtgcctgtagcttttccatactgagggtgtgagccgttggtttgtctatgaatctgggctctggaggatggtggcctcctgtgtgggggctccaagcccata---gtttccttctgcactgccctagcagaggttttccaagaggttctgcctctgcaggaggcttctgcctggaAACAgt--------------------gggcggtggt--------------------------------------------------------gtgggtggcggatccttcaccaatggttaatcttcttgatgctgatctcc---tgatagtgagttatcctgagatctggtcttataacaagatgtggctcttctttcctctctctgtcttgctcctactcctgccatatgaaatgtctcattgccgcttggccttctggtatggttAGGAGG s panTro5.chr3 78738 625 - 202621043 aaaactcaagt-gaattgtaatcctgaatgttggaggtggggcctggtgggaggtgacttaatcatgA-CAGGAGGGTGTTGGGGT--GGAAGAAAAAGGAGTgggtagggtagggaggagtatgttggcagtagggtggtgagagggtagggGGTAGCAGGAAGGGGG----GTAACctgctgcagaggcagaggctcatgggaaacctctactagggcagtgcacctgtggctttgcaggctttagcccccatggctgctctcatgggctgggttggtgtggagtgcctgt-ccttttccatactgagggtgtgagccgttggtttgtctatgaatctgggctctggaggatggtggcctcctgtgtgggggctccaagcccaca---gtttccttctgcaccgccctagcagaggttttc------------------caggaggcttctgccTGGAAACAgt--------------------gggcggtggt--------------------------------------------------------gtgggtggcggatccttcaccaatggttaatcttcttgatgctgatctcc---tgatagtgagttatcctgagatctggtcttacaacaagatgtggctcttctttcctctctctgtcttgctcctactcctgccatatgaaatgtctcattgccgcttggccttctggtatggttaggagg i panTro5.chr3 C 0 C 0 s panPan2.chr3 73412 626 - 205426864 aaaactcaagt-gaattgtaatcctgaatgttggaggtggggcctggtgggaggtgacttaatcatga-caggagggtgttGGGGT--GGAAGAAAAAGGAGTgggtagggtagggaggagtatgttggcagtagggtggtgagagggtagggGGTAGCAGGAAGGGGG----GTAACctgctgcagaggcagaggctcatgggaaacctctactagggcagtgcacctgtggctttgcaggctttagcccccatggctgctctcatgggctgggttggtgtggagtgcctgtagcttttccatactgagggtgtgagccgttggtttgtctatgaatctgggctctggaggatggtggcctcctgtgtgggggctccaagcccata---gtttccttctgcaccgccctagcagaggttttc------------------caggaggcttctgccTGGAAACAgt--------------------gggcggtggt--------------------------------------------------------gtgggtggcggatccttcaccaatggttaatcttcttgatgctgatctcc---tgatagtgagttatcctgagatctggtcttataacaagatgtggctcttctttcctctctctgtcttgctcctactcctgccatatgaaatgtctcattgccgcttggccttctggtatggttaggagg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015884v1 92171 625 + 508821 aaaactcctgt-gaattgtactccttaat-ttggaggtggggcctggtgggaggtgatttaatcatgg-CAGGAGGGGGTTGGGGTTGGAAGGAAAAAGGggttggtagggtgggaagtag---gttggcagtagggtggtgagagggtg---ggtagtaggaa-ggGg----gtaacctgctgcagaggcagaggctcatgggaaacctct--tagggcagtgcacctgtggctttgcaggcttcag-ccccatgtctgctctcatgggctaggctggtgtggagtgcatgtagcttttccatactgaggatgtgaa-cgttggtgggcttatgaatctggggtctggaggatggt-gcctcctatgtgggggctccaagcccata----tttccttctgcactgccatggtagaagtttcc-aagaggctctgcctctgcaggaggcttctgcctgCAAACAGT--------------------GGGCGGTGGT--------------------------------------------------------GTGGGTGGGGTTTCCTTCACCAGTGGTTAA---Tcttgatgctgatctcc---tgatagtgagttctcatgagatctggttgtataacaggatgtggctcctcttt-ctctctctgtcttgctcctactcctgccatatgaaatatctcattgtcgctt-gccttctggtatggttatga-g i gorGor5.CYUI01015884v1 C 0 C 0 s nomLeu3.chr8 79180902 646 + 117381234 aaaactcctgt-gaattgtactccttaatgttggaggtgggtcctggtgggaggtgatttaatcatgg-CAGGAGGGGGTTGGGGTT-GGAAGGAAAAGGGGTGGGTACGGTGGGAAGTAG---GTTGGCAGTAGGGTGGTGGGAGGGTGTTAGGTAGTAGGAAGGggg---agtaatctgcttcagaggcagaggctcatgggaaacctctgctagggcagtgcacctgcagctttgcaggcttccgcccccatgtctgctctcctgggctaggctggtgtggagtgcctgtagcttttccatactgagggtgtgaactgttggtaggcttatgaatctggggtctggaggatggtgacctcctttgtgggggctccaagcccaaatttttttccttctgcattgccatggtagaagtttcccaagaggctctgcctctgcaggaggcttctgcctgCAAACAGT--------------------GGGCAGTGGT--------------------------------------------------------GTGAGTGGTGCTtccttcaccaatggttaatcttcttgatgctgatctcc---tgataatgagttctcatgagatctggttgtataacaggatgtggcacctcctttctccctctgtcttgctcctactcctgccatatgaaatatctcattgtcacttggccttctggtatggttatgagg i nomLeu3.chr8 C 0 C 0 s macFas5.chr15 1516595 638 - 112612857 aaaactcatgt-gaattgtaatccttaatgttggaggtgggacctggtgggaggtgatttaatcatgg-CAGGAGGGGGTTGGGGTT-GGAAGGAAAAGGAGTGGGTAGGGTGGGGAGTAG---GTTGGCAGTAGGGTGGTGGGAGGGTGGTGGGTAGTAGGAagggag---agtagcctgctgcagaggcagaggctcatggaaaacctctactagggcagtgcA-ctgtggcttttcaggctttagcccccatggctgctctcatgggctgggctggtattgagtgcctgtagcttttccatactgagggtgtgagctgttggtaggcttatgaatctggggtctggaggatggtggcctcctgtgtgggggctccaagcccata---ttttccttctgcactgccatagtggaagtttcccaagaggctctgcctctgcaggaggcttctgcctggaAACAgt--------------------gggcggtggt--------------------------------------------------------gtgggtggtggttccttcaccagtggctaaccttcttgatgctgatctcc---tgct----agttctcatgagatctggttgtataacaggatgtggcacctccttcctctctctgtcttgctcctactcctgccggatgaaatatctcattgccgcttggccttctggtgtggttagaagg i macFas5.chr15 I 6513 C 0 s saiBol1.JH378197 59641 720 + 8899380 aaaacttatgtggaattgtattcccaaatgttggaagtggggcctggtgggaggtgacttaatcatggACGGGAGGTTGGTGGGGGTGGAAGGAAAAAGGGGTGGGTAGGGTGGAAGGGAGTAGGTTAGCAGTAGGGTGGTGAGAGGGTGGTGGGTAGTAGGAAGGGGAAGTAGTAGCCCGCTGCAAATGGAAAGGCTCATGGAAAACCTCCACTTcagccgtgcacgtgtggcttctcagggtttagccctcatggctgttctcatgggcggggcaggtgttgagggcccacagcttttccacactgagggttcaaactgttggtgggtttatgaatctaaggactggaggttggtggccccctgtgtggaggctccaagcccata---ttttccttctttactgccccagtagaggttttccaacgcgctctccttctatagcaggcttctgtctggCAACAGTGGGGTTGGGGGTGTGGTGGAGGGTGGTGGTATGGTAGGGGTTGTGGTGTGgtgttgggtggggatatggttgggggtgggagtgtggtggggagtggatctttcaccgatggttaagcacc---------atcttcaaatgatactgagttctcatgagatctggttttataacagggtgtggcaccttttt--tctctctgtcttgcttctacttctgccatatgaaacatcctgttgctgtttggtcttctgatatgattgggagg i saiBol1.JH378197 C 0 N 0 a score=649691.000000 s hg38.chr3_KI270784v1_alt 183850 554 + 184404 ggcctgatcagcgtgggcctggtcagtggacccagtcagttgggactgacctagtcagcgaggcctgtttaatgggggcatggtcagCAGGGGTCTGTTTAGAGAGGGTCTCATTAGGGGGATCTAGTAGT-GGGGTCTTAGTGAGTGGAGACCTAGTGGCAGCCAGTTGTTTGGTGTCTGGTCAGTGCAAACTTGGGCTGTGGGGCTTGGTCAGTGGAGCTTAGTGGTCAACTGGGGCTTAGTGGTGGCCTGGTCAGCATGAGCTGGGGCACTGGTGACCAGGTCAAGGGGTGCTATTCAGTGGAGGCCTGACCACAAGGgacctagtcagcatggcctggtgggcgtgtcctcatcagcgaggcccttgtcagtggggtcctggtcagggcagcctggtcagtggaaccgaatcaacgggggcctggtcagAGAAGACTGGGTCAGTTGTGGCTTTTGTAG-CACTG---GTCTGTGGGGTGACCTGGTCAGCAGGGATCTCAGCAGCGGGTGCCTGTTCAGTGGGGTCTACTCACTAGGGTCGTGGTCAGGGGCAT s panTro5.chr3 79363 552 - 202621043 ggcctgatcagcgtgggcctggtcagtggacctagtcagttgggactgacctagtcagtgaggcctatttaatgggggcatggtcagCAGGGGTCTGTTTAGAGAGGGTCTCATTAGGGGGATCTAGTAGT-GGGGTCTTAGTGAGTGGAGACCTAGTGGCAGCCAGTTGTTTGGTGTCTGGTCAGTGCAAACTTGGGCTGTGGGGCTTGGTCAGTGGAGACC--TGGTCAACTGGGGCTTAGTGGTGGCATTGTCAGCATGGGCTGGGTCACTGGTGACCAGGTCAAGGGGTGCTATTCAGTGGAGACCTGGTCACAAGGGACATAGTCAGCATGGCCTGGTGGGCGTGTcctcatcagtgaggcccttgtcagtggggtcctggtcagggcagcctggtcagtggaacctaatcaatgggggcctggtcagagaagactgggtcagtTGTGGCTTTTGTAG-CACTG---GTCTGTGGGGTGATCTGGTCAGCAGGGATCTCAGCAGTGGGTGCCTGTTCATTGGGGTCTACTCACTAGGGTCGTGGTCAGGGGCAT i panTro5.chr3 C 0 N 0 s panPan2.chr3 74038 552 - 205426864 ggcctgatcagcgtgggcctggtcagtggacctagtcagttgggactgacctagtcagtgaggcctatttaatgggggcatggtcagCAGGGGTCTGTTTAGAGAGGGTCTCATTAGGGGGATCTAGTAGT-GGGGTCTTAGTGAGTGGAGACCTAGCGGCAGCCAGTTGTTTGGTGTCTGGTCAGTGCAAACTTGGGCTGTGGGGCTTGGTCAGTGGAGACC--TGGTCAACTGGGGCTTAGTGGTGGCATTGTCAGCATGGGCTGGGTCACTGGTGACCAGGTCAAGGGGTGCTATTCAGTGGAGACCTGGTCACAAGGGACATAGTCAGCATGGCCTGGTGGGCATGTcctcatcagtgaggcccttgtcagtggggtcctggtcagggcagcctggtcagtggaacctaatcaatgggggcctggtcagagaagactgggtcagtTGTGGCTTTTGTAG-CACTG---GTCTGTGGGGTGACCTGGTCAGCAGGGATCTCAGCAGTGGGTGCCTGTTCATTGGGGTCTACTCACTAGGGTCGTGGTCAGGGGCAT i panPan2.chr3 C 0 N 0 s gorGor5.CYUI01015884v1 92796 536 + 508821 ggcctgatcagtgtgggcctcatcagtggacctagtcagctgggactg-----gtcagtgaggcctatttattgggggcgtggtcagCAGGGGTCTGCTTAGAGAGGGTCTCATTAGGGGGATCTAGTAGT-GGGGTCTTGGTGAGTGGGGACCTAGTGGCAGCCACTTGTTTGGTGTCTGGTCAGTGTAAAACTAGGC--tgggactttgtcaatggagacc--tggtcagctggggcttagtggtggccttgtcagcatgggccgggtcactgGTGACCA-GTCAAGGGGTGCTATTCAGTGGAGGCCTGGTCA-ATGGGAC-TAGTCAGCAGGGCCTGCTGGCCATgt-ctcatcagtgaggcccttgtcagtggggccctggtca-ggcagcctggtcagtggaacctaatcagtgggggcctgttcagAGAGAGC----GCATTTGTGGCTTTTGTAG-CACTG---GTCTGTGGGGTAACCTGGTCAGCAGGGATCTGAGCAGTGGGTGCCTATTCAGTGGGGCCTACTCACTAGGGTCACAGTCAGGGGCAT i gorGor5.CYUI01015884v1 C 0 N 0 s nomLeu3.chr8 79181548 548 + 117381234 gccctgatcagtgtaggcctcatcagtggacctagtcagttgggact----tggtcagtgaggcctatttattgggggcatggtcagtgGGGGTCTGCTTAGAGAGGGTCTCATTAGGGGGATCTAGTAGT-GGGGTCTTGGTGAGTGGGGACCTAGTGGCAGCCACTTGTTTGGTGTCTGGTCAGTGTAAAACTAGGCTGCGGGACTTTGTCAACGGAGACC--TGGTCAGCTGGGGCTTAGTGGCGGCCTTGTCAGCATGGGCTGGGTCACTGGTGACCAGGTCAAGGTGTGCTATTCAGTGGAGACCTGGTCACATGGGACCTAGTCAGCAGGGCCTGCTGGCCATGTTctcatcagtgaggcccttgtcagtggggccctggtcagcgcagcctggtcagtggaacctaatcagtgggagcctgttcagAGAGAGTGCATTCAGTGGTGGCTTTTGTAG-CACTG---GTCTATGGGGTGACCTGGTCAGCGGGGATCTGAGCAGTGGGTGCCTATTCAGTGGTGCCTACTCACTAGGGTCACAGTCAGGGGCAT i nomLeu3.chr8 C 0 N 0 s macFas5.chr15 1517233 552 - 112612857 cccctgatcagtgtgggcctggtcagtgga-ctagtcagttgggact----tggtcagtgaggcctatttattgggggcgtggtcagcaggggtctgcttagAGAGGGTCTCATTAGGGGGATCTAGTAATGGGGGTCTTGGTGAGTGGGGACCTAGTAGCAACCACTTGTTTGATGTCTGGTCAGTGTGAAACTAGGCTGCAGGACTTTGTCAGTGGAGACC--TGGTCAGCTGGGGCTTAGTGGTGGCCATGTCAGCATGGGCTGGGTCACTGGTGACCAGGTCAAGGGGTGCTATTCAGTGGaggcctggtcacatgggacctagtcagcagggcctggtggccatgtcctcatcagtgaggcccttgtcagtggggtactggtcacggcagcctggtcagtggaacctaatcagtgggggcctggtcagagagggcttggttagtggtgggttttgtAGCCACCGGGTGGCTATGGGCTGACCTGGTCAGTGGGGATCTGAGCAGTGGTTgcctattcagtggagcctactcactagggtcacagtcaggggcat i macFas5.chr15 C 0 N 0