##maf version=1 scoring=roast.v3.3 a score=1326590.000000 s hg38.chr3_KI270934v1_alt 1 259 + 163458 AATTCTTCCCTGAGA-CTTTGTCTCTCTGAGTATCATCTTGCCAACTATCTAGGAGCACTGAGGTT--GAAAAA--------------------------------------------------------------------------AAGGGTgggagcggtggctcacacctttaatcccagtactttgagagtctgaagcaggaggatcgcttgaggccgggagttcgacaccagcctaggcaacatagcaagattccacctctacagaaataaaaaaattacccaggcatggttgtgtgtgcctgtagtcccagctactcagaaggcCAATT s panTro5.chr3 2461741 259 - 202621043 AATTCTTCCCTGAGG-CTTTGTCTCTCTGAATATCATCTTGCCAACTATCTAGGAGCACTGAGGTA--GAAAAA--------------------------------------------------------------------------AAGGGTgggagcggtggctcacacctttaatcccagtactttgagagtctgaagcaggaggatcgcttgaggccgggagttcgacaccagcctaggcaacatagcaagattccacctctacaaaaataaaaaaattacccaggcatggttgtgtgtgcctgtagtcccagctactcagaaggcCAatt i panTro5.chr3 N 0 C 0 s panPan2.chrUn_NW_014024201v1 74775 258 - 190779 AATTCTTCCCTGAGA-CTTTGTCTCTCTGAATATCATCTTGCCAACTATCTAGGAGCACTGAGGTA--GAAAAA--------------------------------------------------------------------------AAGGGTgggagcggtggctcacacctttaatcccagtactttgagagtctgaagcaggaggatcgcttgaggccgggagttcgacaccagcctaggcaacatagcaagattccacctctacaaaaat-aaaaaattacccaggcatggttgtgtgtgcctgtagtcccagctactcagaaggcCAATT i panPan2.chrUn_NW_014024201v1 N 0 C 0 s gorGor5.CYUI01000254v1 182498 259 + 189199 AATTCTTCCCTGAGA-CTTTGTCTCTCTGAATATCATCTTGCCAACTATCTAGGAGCACTGAGGTT--GAAAAA--------------------------------------------------------------------------AAGGGTgggagcggtggctcacacctttaatcccagtactttgagagtctgaagcaggaggatcgcttgaggccgggagttcgacagcagcctaggcaacatagcaagattccacctctacaaaaataaaaaaattacccaggcatggttgtgtgtgcctgtagtcccagctactcagaaggcCAATT i gorGor5.CYUI01000254v1 N 0 C 0 s nomLeu3.chr11 2773006 259 - 123690457 AATTCTTCCCTGAGA-CTTTGTCTCTCTGAATATCATCTTGCCAACTATCTAGGAGCACTGAGGTT--AAAAAA--------------------------------------------------------------------------AAGGGTgggagcggtggctcacacatttaatcccggtactttgagaggctgaagcaggaggatcgcttgaggccaggagttcgacaccagcctaggcaacatagcaagattccacctttacaaaaataaaaaaattacccaggcatgattgtgtgtgcctgtagtcccagctactcagaaggcCAATT i nomLeu3.chr11 N 0 C 0 s rheMac8.chr2 2287701 260 - 204787373 AATTCTTCCCTGAGA-CTTTATCTCTCTGAATATCATCTTGCCAACTATCTGGGAGCACTGAGATTT-AAAAAA--------------------------------------------------------------------------AAGGGTgggagcggtggttcacacctttaatcccagtgctttgagaggctgaagccggaggatcacttgaagccgggagttccacaccagcctaggcaacatagcaagattccacctctacaaaaataaaaaaatgacccaggcgtggttgtgtgtgcctgtagtcccagctactcagaaggcCAATT i rheMac8.chr2 N 0 C 0 s macFas5.chr2 192353801 260 - 192460366 aattcttccctgaga-ctttatctctctgaatatcatcTTGCCAACTATCTGGGAGCACTGAGGTTT-AAAAAA--------------------------------------------------------------------------AAGGGTgggagcggtggttcacacctttaatcccagtgctttgagaggctgaagccggaggatcacttgaagccgggagttccacaccagccttggcaacatagcaagattccacctctacaaaaataaaaaaatgacccaggcatggttgtgtgtgcctgtagtcccagctactcagaaggcCAATT i macFas5.chr2 N 0 C 0 s cerAty1.NW_012004056v1 16325826 260 - 16847902 aattcttccctgagg-ctttatctctctgaatatcatcTTGCCAACTATCCGGGAGCACTGAGGTTT-AAAAAA--------------------------------------------------------------------------AAGGGTgggagcggtggttcacacctttaatcccagtgctttgagaggctgaagccggaggatcacttgaggccgggagttccacaccagcctaggcaacatagcaagattccacctctacaaaaataaaaaagtgacccaggcatggttgtgtgtgcctgtagtcccagccactcagaaggcCAATT i cerAty1.NW_012004056v1 N 0 C 0 s chlSab2.chr15 91299229 260 + 91754291 aattcttccctgaga-ctttatctctctgaatatcatcTTGCCAACTATCTGGGAGCACTGAGGTTT-AACAAA--------------------------------------------------------------------------AAGGGTgggagcagtggttcacacctttaatcccagtgctttgagaggctgaagcaggaggatcacttgaggccgggagttccacaccagcctaggcaacatagcaagattccacctctacaaaaattaaaaaatgacccaggcatggttgtgtgtgcctgtagtcccagctactcagaaggcCAGTT i chlSab2.chr15 N 0 C 0 s manLeu1.NW_012102020v1 1339035 260 + 1977891 aattcttccctgagg-ctttatctctctgaatatcatcTTGCCAACTATCTGGGAGCACTGAGGTTT-AAAAAA--------------------------------------------------------------------------AAGGGTgggagcggtggttcacacctttaatcccagtgctttgagaggctgaagccggaggatcacttgaggccgggagttccacaccagcctaggcaacatagcaagattccacctctacaaaaataaaaaagtgacccaggcatggttgtgtgtgcctgtagtcccagccactcagaaggcCAATT i manLeu1.NW_012102020v1 N 0 C 0 s colAng1.NW_012118932v1 7301910 261 - 7796314 aattcttccctgaga-ctttgtctctctgaatagcatcTTGCCAACTATCTGAGAGCACTGAGGTTTAAAAAAA--------------------------------------------------------------------------AAGGGTgggagtggtggttcacacctttaatcccagtactttgagaggctgaagcaggaggatcacttgaagccgggagttccacaccagccttggcaacatggcaggattccacctctacaaaaataaaaaaatgccccaggcatggttgtgtgtgcctgtagtcccagctactcagaaggcCAATT i colAng1.NW_012118932v1 N 0 C 0 s otoGar3.GL873829 149089 320 + 608964 aatccttccctgagagttttctctctgtgaacttcatccctcCAACCAACTATGAGCACTGAGGTT--AAAAAACCAACCAACCAGACAAACCAAGTAAAATGTTTGAGAACAGCTAGGGAGCTAATGAACACTAAAAAGAGTAAGCTGAggctgggcgaggtggctcatgcctgtaatgctagcactctgggaggccgaggcaagtggattgcctgagctcacgtgttcaagaccagcctgagctagat--caaga---cctgtctctaaaaatag---------ccagccgtggtggtaggcacctgtagtcccagctgctcgggaggctgagt i otoGar3.GL873829 N 0 I 58 a score=244992.000000 s hg38.chr3_KI270934v1_alt 260 63 + 163458 -ACACCGCTGAACTTCAGCCTGGGTGACAGAAGACCCTGtctctctttctctctctctctttct s panTro5.chr3 2462000 63 - 202621043 -acaccgctgaacttcagcctgggtgacagaagaccctgtctctctttctctctctctctttct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75033 63 - 190779 -ACACCGCTGAACTTCAGCCTGGGTGACAGAAGACCCTGtctctctttctctctctctctttct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 182757 63 + 189199 -ACACCGCTGAACTTCAGCCTGGGTGACAGAAGACCCTGtctctctctctctctctctctcttt i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2773265 63 - 123690457 -ACACCGCTGGACTTCAGCCTGGGTGGCAGAAGACCctctctctctctctctctctctctctct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2287961 63 - 204787373 -ACACGGCTGAACTTCAGCCTGGGGGACAGAAGACCTTGTTtccctctctctctctctctctct i rheMac8.chr2 C 0 I 262 s macFas5.chr2 192354061 54 - 192460366 -ACACGGCTGAACTTCAGCCTGGGGGACAGAAGACCCTGTTTCCctctctctctc--------- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16326086 63 - 16847902 -ATACCGCTGAACTTCAGCCTGGGGGACAGAAGActctgcttctctctctcaatctctctctct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91299489 64 + 91754291 AACACCGCTGAACTTCAGCCTGGGGGACAGAAGACActctctctctctctctctctctctctct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1339295 63 + 1977891 -ACACGGCTGAACTTCAGCCTGGGGGACAGAAGACTCTGCTtctctctctctctctctctctct i manLeu1.NW_012102020v1 C 0 I 276 s colAng1.NW_012118932v1 7302171 45 - 7796314 -ACACTGCTGAACTTCAGCCTCGGTGACAGAAGACTCTGTCTCTCT------------------ i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 149409 58 + 608964 I a score=14472.000000 s hg38.chr3_KI270934v1_alt 323 8 + 163458 ttctctct s panTro5.chr3 2462063 8 - 202621043 ctctctct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75096 8 - 190779 ctctctct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 182820 8 + 189199 ctttctct i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2773328 8 - 123690457 ctctctct i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16326149 8 - 16847902 ctctctct i cerAty1.NW_012004056v1 C 0 I 426 s chlSab2.chr15 91299553 8 + 91754291 ctctctct i chlSab2.chr15 C 0 C 0 e otoGar3.GL873829 149409 58 + 608964 I e colAng1.NW_012118932v1 7302216 0 - 7796314 C e manLeu1.NW_012102020v1 1339358 276 + 1977891 I e macFas5.chr2 192354115 0 - 192460366 C e rheMac8.chr2 2288024 262 - 204787373 I a score=6537.000000 s hg38.chr3_KI270934v1_alt 331 8 + 163458 ctctctct s panTro5.chr3 2462071 8 - 202621043 ctctttct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75104 8 - 190779 ctctctct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 182828 8 + 189199 ctctctct i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2773336 8 - 123690457 ctctatat i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91299561 8 + 91754291 ctatatat i chlSab2.chr15 C 0 I 37 e otoGar3.GL873829 149409 58 + 608964 I e colAng1.NW_012118932v1 7302216 0 - 7796314 C e manLeu1.NW_012102020v1 1339358 276 + 1977891 I e cerAty1.NW_012004056v1 16326157 426 - 16847902 I e macFas5.chr2 192354115 0 - 192460366 C e rheMac8.chr2 2288024 262 - 204787373 I a score=-12555.000000 s hg38.chr3_KI270934v1_alt 339 8 + 163458 tt---------ct-------tctc s panTro5.chr3 2462079 6 - 202621043 tc------------------tctc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75112 12 - 190779 ct---------ctct---tctctc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 182836 21 + 189199 tttctctctctctct---cttctc i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2773344 15 - 123690457 at---------atatatatatata i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192354115 4 - 192460366 --------------------tctc i macFas5.chr2 C 0 C 0 s colAng1.NW_012118932v1 7302216 1 - 7796314 -----------------------C i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 149409 58 + 608964 I e manLeu1.NW_012102020v1 1339358 276 + 1977891 I e chlSab2.chr15 91299569 37 + 91754291 I e cerAty1.NW_012004056v1 16326157 426 - 16847902 I e rheMac8.chr2 2288024 262 - 204787373 I a score=20975.000000 s hg38.chr3_KI270934v1_alt 347 18 + 163458 tctctctctctctctATA s panTro5.chr3 2462085 18 - 202621043 tctctctctctctctATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75124 18 - 190779 tctctctctctctctATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 182857 17 + 189199 tctctctctctct-TATA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2773359 18 - 123690457 tatatatatatatatata i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192354119 18 - 192460366 tctctctctctctctata i macFas5.chr2 C 0 I 122 s chlSab2.chr15 91299606 18 + 91754291 tatctatctatatctatc i chlSab2.chr15 I 37 C 0 s colAng1.NW_012118932v1 7302217 18 - 7796314 TCTCTATAAAAATATATA i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 149409 58 + 608964 I e manLeu1.NW_012102020v1 1339358 276 + 1977891 I e cerAty1.NW_012004056v1 16326157 426 - 16847902 I e rheMac8.chr2 2288024 262 - 204787373 I a score=29974.000000 s hg38.chr3_KI270934v1_alt 365 12 + 163458 TATATATGTTTA s panTro5.chr3 2462103 12 - 202621043 TATATATGTTTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75142 12 - 190779 TATATATGTTTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 182874 12 + 189199 TATATATGTTTA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2773377 12 - 123690457 tatatatGTTTA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192354259 12 - 192460366 tatatatGTTTA i macFas5.chr2 I 122 C 0 s chlSab2.chr15 91299624 12 + 91754291 tatatatGTTTA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7302235 12 - 7796314 TGTATATGTTTA i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 149409 58 + 608964 I e manLeu1.NW_012102020v1 1339358 276 + 1977891 I e cerAty1.NW_012004056v1 16326157 426 - 16847902 I e rheMac8.chr2 2288024 262 - 204787373 I a score=11689.000000 s hg38.chr3_KI270934v1_alt 377 6 + 163458 AAAAGA-- s panTro5.chr3 2462115 6 - 202621043 AAAAGA-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75154 6 - 190779 AAAAGA-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 182886 6 + 189199 AAAAGA-- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2773389 6 - 123690457 AAAAGG-- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192354271 6 - 192460366 AAAAGA-- i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91299636 6 + 91754291 AAAAGA-- i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7302247 6 - 7796314 AAAAGA-- i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 149467 6 + 608964 --agggca i otoGar3.GL873829 I 58 C 0 e manLeu1.NW_012102020v1 1339358 276 + 1977891 I e cerAty1.NW_012004056v1 16326157 426 - 16847902 I e rheMac8.chr2 2288024 262 - 204787373 I a score=3276.000000 s hg38.chr3_KI270934v1_alt 383 1 + 163458 A s panTro5.chr3 2462121 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75160 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 182892 1 + 189199 A i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2773395 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2288286 1 - 204787373 A i rheMac8.chr2 I 262 C 0 s cerAty1.NW_012004056v1 16326583 1 - 16847902 A i cerAty1.NW_012004056v1 I 426 C 0 s manLeu1.NW_012102020v1 1339634 1 + 1977891 A i manLeu1.NW_012102020v1 I 276 C 0 s otoGar3.GL873829 149473 1 + 608964 a i otoGar3.GL873829 C 0 C 0 e colAng1.NW_012118932v1 7302253 0 - 7796314 C e chlSab2.chr15 91299642 0 + 91754291 C e macFas5.chr2 192354277 0 - 192460366 C a score=1125448.000000 s hg38.chr3_KI270934v1_alt 384 215 + 163458 AAAA-GAAAGAAGTTTGAGAACAGCTAGGGAACTAATGAAAACCCAAAAGAGTCAGTTTCTAAG-AGAAAAAAA-----------------------------AAGG---CAAGTTTTCTTGGTTTCTTCTTGG--TTCAGAGACTCAGAGG---CT---AAGGTAATATTCACGAAGATG----------------------------GTATGTGGCTAGTG--CAGGTGCTGTG-AAATATTTTAAACAAAAAAAGCCAATATTTAAACATTCTGCCTGGGAAATA s panTro5.chr3 2462122 216 - 202621043 AAAAAGAAAGAAGTTTGAGAACAGCTAGGGAACTAATGAAAACCCAAAAGAGTCAGTTTCTAAG-AGAAAAAAG-----------------------------AAGG---CAAGTTTTCTTAGTTTCTTCTTGG--TTCAGAGACTCAGAGA---CT---AAGGTAATATTCAAGAAGATG----------------------------GTATGTGGCTAGTG--TAGGTGCTGTG-AAATATTTTAAACAAAAAAAGCCAATATTTAAACATTCTGCCTGGGAAATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75161 214 - 190779 AAAA-GAAAGAAGTTTGAGAACAGCTAGGGAACTAATGAAAACCCAAAAGAGTCAGTTTCTAAG-AGAAAAAAG-----------------------------AAGG---CAAGTTTTCTTGGTTTCTTCTTGG--TTCAGAGACTCAGAGA---CT---AAGGTAATATTCAAGAAGATG----------------------------GTATGTGGCTAGTG--TAGGTGCTGTG-AAATATTTTAAAC-AAAAAAGCCAATATTTAAACATTCTGCCTGGGAAATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 182893 214 + 189199 AAAA-GAAAGAAGTTTGAGAACAGCTAGGGAACTAATGAAAACCCAAAAGAGTCAGTTTCTAAG-AGAAAAAA------------------------------AAGG---CAAGTTTTCTTGGTTTCTTCTTGG--TTCAGGGACTCAGAGG---CT---AAGGTAATATTCAAGAAGATG----------------------------GTACGTGGCTAGTG--TAGGTGCTGTG-AGATATTTTAAACAAAAAAAGCCAATACTTAAACATTCTGCCTGGGAAAta i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2773396 217 - 123690457 AAAA-GAAAGAAGTTTGAGAACAGCTAGGGAACTAATGAAAACCCAAAAGAGTCAGTTTCTAAA-AGAAAAAAG---------------------------AAAAGG---CAAGTTTTCTTGGTTTCTTCTTAG--TTCAGAGACTCAGAGA---CT---AAGGTAATATTCAAGAAGATG----------------------------GTATGTGGCTAGTG--TAGGTGCTATG-AAATATTGTAAACAAAAAAAGCCAATATTTAAACATTCTGCCTGGGAAATA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2288287 212 - 204787373 AAAA-GAAAAAAGTTTGAGAACAGCTAGGGAACTAATGAAAACCCAAAAGAGTAAGTTTCTAAG-AAAAAA--------------------------------AAAG---CAAGTTTTCTTGGTTTCTTCTTGG--TTCAGAGACTCAGAGA---CT---AAGGTAATATTCAGGAAGATG----------------------------GTATGTGGCTAGTG--TAGGTGCTATG-AAATATTTTAAACAAAAAAATCCAATATTTAAACATTCTGCCTGGGAAAta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192354277 206 - 192460366 -------AAAAAGTTTGAGAACAGCTAGGGAACTAATGAAAACCCAAAAGAGTAAGTTTCTAAG-AAAAAA--------------------------------AAAG---CAAGTTTTCTTGGTTTCTTCTTGG--TTCAGAGACTCAGAGA---CT---AAGGTAATATTCAGGAAGATG----------------------------GTATGTGGCTAGTG--TAGGTGCTATG-AAATATTTTAAACAAAAAAATCCAATATTTAAACATTCTGCCTGGGAAAta i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16326584 210 - 16847902 AAAA-GAAAAAAGTTTGAGAACAGCTAGGGAACTAATGAAAACCCAAAAGAGTAAGTTTCTAAG-AAAAAA--------------------------------AAAG---CAAGTTTTCTTGGTTTCTTCCTGG--TTCAGAGACTCAGAGA---CT---AAGGTAATATTCAGGAAGATG----------------------------GTATGTGGCTAGTG--TAGGTGCTATG-AAATATTTTAAAC--AAAATTCCAATATTTAAACATTCTGCCTGGGAAAta i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91299642 206 + 91754291 -------AAAAAGTTTGAGAACAGCTAGGGAACTAATGAAAACCCAAAAGAGTAAGTTTCTAAG-AAAAAA--------------------------------AAAG---CAGGTTTTCTTGGTTTCTTCTTGG--TTCAGAGACTCAGAGA---CT---AAGGTAATATTCAAGAAGATG----------------------------GTATGTGGCTAGTG--TAGGTGCTATG-AAATATTTTAAACAAAAAAATCCAATATTTAAACATTCTGCCTGGGAAATA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1339635 210 + 1977891 AAAA-GAAAAAAGTTTGAGAACAGCTAGGGAACTAATGAAAACCCAAAAGAGTAAGTTTCTAAG-AAAAAA--------------------------------AAAG---CAAGTTTTCTTGGTTTCTTCCTGG--TTCAGAGACTCAGAGA---CT---AAGGTAATATTCAGGAAGATG----------------------------GTATGTGGCTAGTG--TAGGTGCTATG-AAATATTTTAAAC--AAAATTCCAATATTTAAACATTCTGCCTGGGAAAta i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7302253 206 - 7796314 -------AAAAAGTTTGAGTACAGCTAGGGAACTAATGAAAACCCAAAAGAGTAAGTTTCTAAGAAAAAAA--------------------------------AAAG---CAAGTTTTCTTGGTTTCTTCTTGG--TTCAGAGACTCAGAGA---CT---AAGGTAATATTCAAGAAG-TG----------------------------GTATATGGCTAGTG--TAGGTGCTATG-AAATATTTTAAACAAAAAATTCCAATATTTAAACATTCTGCCTGGGAAAta i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 149474 214 + 608964 caaa-gtgaaactctCAaaaacaaa-acaaaacaaaacgaaacaaaaAAGAGTAAGCTGCTAAG-TAAAAAT-------------------------------GACT---CATGTTTTCACGAATTCTCCTTGA--TTTAG-GACTCAGAGAACTTT---AAGATAAAGTTCAGGAGGATG----------------------------GCATGTAGGTAATG--TAGGTGCTGTA-AAATATTTTGAACAAAATAAGCTGACATTTAAACATCAGGCCTGGGAAATA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2283129 283 - 31377067 AAAA-AAAAAATGTTTGAATACAGCTAGGGAGCTAATGAAAACCAAAAAGAGTAAGTTCCTAAA-aaaacaaaacaaaacaaaacaaaaAAACACACACACAAAAAGACTCAATGTTTTGGGGTTTCTTCTTTGATTTAAAAGACTCAAAGT---CCCTAAAGGTAAAATTCAGGGGGATGATCGGGTCTACTGGTTGACTGAGGCTTTGTCTGTGACTAGTGACTAGTGGGAGTACAAATATTTTAAACCGAACAATTTGATACTTAAATATCCTGCCTACCAGATA i canFam3.chr33 N 0 I 8 a score=14322.000000 s hg38.chr3_KI270934v1_alt 599 3 + 163458 TTt s panTro5.chr3 2462338 3 - 202621043 TTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75375 3 - 190779 TTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 183107 3 + 189199 ttt i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2773613 3 - 123690457 TTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2288499 3 - 204787373 ttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192354483 3 - 192460366 ttt i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16326794 3 - 16847902 ttt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91299848 3 + 91754291 TTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1339845 3 + 1977891 ttt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7302459 3 - 7796314 ttt i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 149688 3 + 608964 CAT i otoGar3.GL873829 C 0 C 0 e canFam3.chr33 2283412 8 - 31377067 I a score=744953.000000 s hg38.chr3_KI270934v1_alt 602 179 + 163458 ttctttatttatttaatatctatttttattattattattATTatttttattttttaagacacagggtctcgctatcttgcccaggctggtctcaaactcctggcctcgagtgatcctcccaccttggcctcccaaaatgctgggattacagacatgagccaccatgcctggccTCTGCC s panTro5.chr3 2462341 169 - 202621043 TTCTTTATTTA----ATATCTATTTTTATTATTATTatt------tttattttttaagacacagggtctcgctatgttgcccaggctggtctcaaactcctggcctcaagtgatcctcccaccttggcctcccaaaatgctgggattacagacatgagccaccatgcctggccTCTGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75378 169 - 190779 TTCTTTATTTA----ATATCTATTTTTATTATTATTatt------tttattttttaagacacagggtctcgctatgttgcccaggctggtctcaaactcctggcctcaagtgatcctcccaccttggcctcccaaaatgctgggattacagacatgagccaccatgcctggccTCTGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 183110 179 + 189199 ttctttatttatttaatatctattattattattattatttttatttttattttttaagacagagggtctcgctatgttgcccaggctggtctcaaactcctggcctcaagtgatcctcccaccttggcctcccaaaatgctgggattacagacatgagccaccatgcctggccTCTGCC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2773616 168 - 123690457 TTCTTTATTTATTTAATATTTATTTT-----TTTttatt------tttattttttaagacacagggtctcgctatgttgcccaggctggtctcaaactcctggcctcaagtgatcctcccaccttggcctcccaaaatgctgggattacagacatgagccaccatgcctggccTCTGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2288502 171 - 204787373 ttctttctttatttaata--tattattattattattact------attactaTTTAagacacagggtctcgctatgttgcccaggctggtctcaaactcctggcctcaagtggtcctcccaccttggactcccaaagtgctgggattacagacatgagctaccatgcctggccTCTGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192354486 171 - 192460366 ttctttctttatttaata--tattattattattattact------attactaTTTAagacacagggtctcgctatgttgcccaggctggtctcaaactcctggcctcaagtggtcctcccaccttggactcccaaagtgctgggattacagacatgagccaccatgcctggccTCTGCC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16326797 168 - 16847902 ttctttatttatttagta-----tattattattattact------actactaTTTAagacacagggtctcgctatgttgcccaggctggtctcaaactcctggcctcaagtggtcctcccaccttggactcccaaagtgctgggattacagacatgagccaccatgcctggccTCTGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91299851 168 + 91754291 TTCTTTCTTTATTTAGTA-----TATTATTATTAttatt------attactatttaagacacagggtctcgctatgttgcccaggctggtctcaaactcctggcctcaagtggtcctcccaccttggactcccaaagtgctggaattacagacatgagccaccattcctggccTCTGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1339848 168 + 1977891 ttctttctttatttagta-----tattattattattact------actactaTTTAagacacagggtctcgctatgttgcccaggctggtctcaaactcctggcctcaagtggtcctcccaccttggactcccaaagtgctgggattacagacatgagccaccatgcctggccTCTGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7302462 164 - 7796314 ttctttc----tttaata-----tattattattattatt------attactaTTTAagacacagggtctcactatgttccccaggctggcctcaaactcctggcctcaggtgatccatccatcttggcctcccaaagtgctgggattacagacatgagccaccatgcctggccTCTGCC i colAng1.NW_012118932v1 C 0 C 0 e canFam3.chr33 2283412 8 - 31377067 I e otoGar3.GL873829 149691 0 + 608964 C a score=67921.000000 s hg38.chr3_KI270934v1_alt 781 19 + 163458 TGGGAAATAATTTTTTT-TT s panTro5.chr3 2462510 19 - 202621043 TGGGAAATAATTTTTTT-TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75547 17 - 190779 TGGGAAATAATTTTTTT--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 183289 20 + 189199 TGGGAAATAATTTTTTTTTT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2773784 19 - 123690457 TGGGAAATAATTTTCTT-TT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2288673 19 - 204787373 TGGGAAATAATGTTTTA-AA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192354657 19 - 192460366 TGGGAAATAATGTTTTA-AA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16326965 19 - 16847902 TGGGAAATAACGTTTTT-AA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91300019 19 + 91754291 TGGGAAATAATGTTTTT-TA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1340016 19 + 1977891 TGGGAAATAATGTTTTT-AA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7302626 19 - 7796314 TGGGAAATAATGTTTTT-AA i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 149691 17 + 608964 TGGAAAATAAAGTTACT--- i otoGar3.GL873829 C 0 C 0 e canFam3.chr33 2283412 8 - 31377067 I a score=739166.000000 s hg38.chr3_KI270934v1_alt 800 150 + 163458 AAAAAGTGGTTATGGTCAATAATATTAGCTTCTTGGTAGTCTGTGACCAGGGCAAGAGTATATGCATTTACCCCTTGGGTTTTTTACCAGATTGGCACAGATGTTAACAACGAAAAAGAAAAGTAGAAATTTAAT-----TTATTTTTAAGAAAG s panTro5.chr3 2462529 150 - 202621043 AAAAAGTGGTTATGGTCAATAATATTAGCTTCATGGTAGTCTGTGACCAGGGCAAGAGTATATGCATTTACCCCCTGGGTTTTTTACTAGATTGGGACAGATGTTAACAACGAAAAAGAAAAGTAGAAATTTAAT-----TTATTTTTAAGAAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75564 150 - 190779 AAAAAGTGGTTATGGTCAATAATATTAGCTTCATGGTAGTCTGTGACCAGGGCAAGAGTATATGCATTTACCCCCTGGGTTTTTTACTAGATTGGGACAGATGTTAACAACGAAAAAGAAAAGTAGAAATTTAAT-----TTATTTTTAAGAAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 183309 145 + 189199 AAAAAGTGGTTATGGTCAATAATATTAGCTTCATGGTAGTCTGTGACCAGGGCAAGAGTATATGCATTTACCCCTTGGGTTTTTTAC-----TGGGACAGATGTTAATAACGAAAAAGAAAAGGAGAAATTTAAT-----TTATTTTTAAGAAAG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2773803 149 - 123690457 TTAAAGTGGTTATGATCAATAATATTAGCTTCATGGTAGTCTGTGACCAGGGCAAGAGTATATGCATTTA-CCCTTGGGTTTTTTACTAGATTGGGACAAATGTTAATAACGAAAAAGAAAAGTAGAAATTTAAT-----TTATTTTTAAGAAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2288692 147 - 204787373 AAAAAGTAGTTATGACCGATGATATTAGCTTCATGGTAGTCTGTGACCAGGACGAGAGTATATGCATTTACCGCTTGGGTTTTTTATTAGATTGGGATAAATGTT---AACGAAACAGAACAGTAGAAATTTAAT-----TTATTTTTAAGAAAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192354676 147 - 192460366 AAAAAGTAGTTATGACCAATGATATTAGCTTCATGGTAGTCTGTGACCAGGACGAGAGTATATGCATTTACCGCTTGGGTTTTTTATTAGATTGGGATAAATGTT---AACGAAACAGAACAGTAGAAATTTAAT-----TTATTTTTAAGAAAG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16326984 147 - 16847902 AAAAAGTAGTTATGACCAATGATATTAGCCTCATGGTAGTCTGTGACCAGGACGAGAGCATATGCATTTACCACTTGGGTTTTTTATTAGATTGGGATAAATGTT---AATGAAACAGAACAGTAGAAATTTAAT-----TTATTTTTAAGAAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91300038 147 + 91754291 AAAAAGTAGTTATGACCAATGATATTAGCCTCATGGTAGTCTGTGACCAGGACAAGAGTATATGCATTTACCGCTTGGGTTTTTTATTAGATTGGGATAAATGTT---AACGAAACAGAACAGTAGAAATTTAAT-----TTATTTTTAAGAAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1340035 147 + 1977891 AAAAAGTAGTTATGACCAATGATATTAGCCTCATGGTAGTCTGTGACCAGGACGAGAGCATATGCATTTACCGCTTGGGTTTTTTATTAGATTGGGATAAATGTT---AATGAAACAGAACAGTAGAAATTTAAT-----TTGTTTTTAAGAAAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7302645 147 - 7796314 CAAAAGTAGTTATGACCAATGATATTAGCCTCATGGTAGTCTGTGACCAGGACGAGAGTATATGCATTTACCGCTTGGGTTTTTTATTAGATTGGGACAAATGTT---AACGAAACAGAACAGTAGAAATTTAAT-----GTATTTTTAAGAAAG i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 149708 126 + 608964 --------------ATCAATTAAATTAGCAACATGTTAGGAAGCAACCAGGGCTGGAGTATATGCACGTACTCCTTAGG-TTTCTGCTAGATTGGGATGAATGTT---TAAGATAAAAATAAGTAGAAATTTAAT-----TTACTTTAA------ i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2283420 141 - 31377067 AAAAAATAGACATGATCAATTAAATTAA---CATTGTATGACATGATGAGAGATAGAATATGTACACTTACTCCTTAGGTTTCT------GCTAGAACAAATGTTTAAGATGAGGGGGGGAAGTAGACatttaattattattatttttaa----- i canFam3.chr33 I 8 C 0 a score=810308.000000 s hg38.chr3_KI270934v1_alt 950 132 + 163458 ATAATGCTATAATTCAAGTTGAGAGAGTTAACCCGGCTTATAGCAGGGGTACTGTTTGCCTCTTCCCATGGAGTTTAACACAGTTAATTCACCATTCTAGTCTAACCTCACCTTCCTCCTCACAAGGAAGAC s panTro5.chr3 2462679 132 - 202621043 ATAATGCTATAATTCAAGTTGAGAGAGTTAACCCGGCTTATAGCAGGGGTACTGTTTCCCTCTTCCCATGGAGTTTAACACAGTTAATTCACCATTCTAGTCTAACCTCACTTTCCTCCTCACAAGGAAGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75714 132 - 190779 ATAATGCTATAATTCAAGTTGAGAGAGTTAACCCGGCTTATAGCAGGGGTACTGTTTCCCTCTTCCCATGGAGTTTAACACAGTTAATTCACCATTCTAGTCTAACCTCACTTTCCTCCTCACAAGGAAGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 183454 132 + 189199 ATAATGCTATAATTCAAGTTGAGAGAGTTAACCCAGCTTATAGCAGGGGTACTGTTTCCCTCTTCCCATGGAGTTTAACACAGTTAATTCACCATTCTAGTCTAACCTCACCTTCCTCCTCACAAGGAAGAC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2773952 132 - 123690457 ATAATGCTATAATTCAAGTTGAGAGAGTTAACCCAGCTTATAGCAGAGGTACTGATTCCCTTTTCCCATGGAGTTTAACACAGTTCATTCACCATTCTAGTCTAACCTCACCTTCCCCCTCACAAGGAAGAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2288839 131 - 204787373 ATAACGCTGTAATTCAAGGTGAGAGAGTTAACCCGGCTTACAGCAG-GGTACCGTTTCCGTCTTCCCATGGAGTTTAAAACAGTTCATTCACCATTCTAGTCTAACCTTACCTTCCTCCCCACAACGAAGAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192354823 131 - 192460366 ATAACGCTGTAATTCAAGGTGAGAGAGTTAACCCGGCTTACAGCAG-GGTACCGTTTCCGTCTTCCCATGGAGTTTAAAACAGTTCATTCACCATTCTAGTCTAACCTTACCTTCCTCCCCACAACGAAGAC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16327131 131 - 16847902 ATAACGCTGTAATTCAAGGTGAGAGAGTTAACCCGGCTTACAGCAG-GGTACCGTTGTCGTCTTCCCATGGAGTTTAAAACAGTTCATTCACCATTCTAGTCTAACCTTACCTTCCTCCCCACAACAAAGAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91300185 131 + 91754291 ATAATGCTGTAATTCAAGGTAAGAGAATTAACCCGGCTTACAGCAG-GGTACTGTTTCCGTCTTGCCATGGAGTTTAAAACAGTTCATTCACCATTCTAGTCCAACCTTACCTTCCTCCCCACAAGGAAGAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1340182 131 + 1977891 ATAACGCTGTAATTCAAGGTGAGAGAGTTAACCCGGCTTACAGCAG-GGTACCGTTGCCGTCTTCCCATGGAGTTTAAAACAGTTCATTCACCATTCTAGTCTAACCTTACCTTCCTCCCCACAACAAAGAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7302792 131 - 7796314 ATAACGCTGTAATTCAAGGTGAGAGAGTTAACCCGGCTTACAGCAG-GGTACCGTTTCCCTCTTCCCATGGAGTTTAAAACAGTTCACTCACCATTCTAGTCTAACCTTACCTTCCTCCTCACAAGGAAGAC i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 6315536 132 + 6778120 ATAACGCTATAATTCAAGGTGGGAGGGTCAACCTGGCTTATAGCAGAGGTTTTGCTTCCCTCTTCCCATGGAGTTTAAAACAGTTCACTCGCCGTTCTAGTTTAACCTGATCTTCCTCCTTGTAAGGAAGAC i cebCap1.NW_016107444v1 N 0 C 0 s otoGar3.GL873829 149834 124 + 608964 AAAATGCTATAATTCAAATTGAAAGAGTTAGC-------ACAGCAAGGGCATTGTCTCCCTTGCCCTTCGGAGATTAAAACAGCCCATTCACCATTCTGGTCTAACCTCACC-TCTTCCTCACAGGGAAGAC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2283561 104 - 31377067 --aatGTTCTAGTTC----TGCAAGAGCTAAC------------------ATTGTCTCCCACT----GAGGGGTTTAAAACAGTCTGGTAACCATTCTAGTCTAACCTTGTCCTCCTCTTCATAAGGAAAAC i canFam3.chr33 C 0 I 288 a score=137063.000000 s hg38.chr3_KI270934v1_alt 1082 25 + 163458 AGGCGGGAGCTGGAGAAGACC--ATTG s panTro5.chr3 2462811 25 - 202621043 AGGTGGGAGCTGGAGAAGACC--ATTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75846 25 - 190779 AGGTGGGAGCTGGAGAAGACC--ATTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 183586 25 + 189199 AGGTGGGAGCTGGAGAAGACC--ATTG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2774084 25 - 123690457 AGGCGGGAGCTGGAGAAGACC--ATTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2288970 25 - 204787373 AGCCGGGAGCTGGAGAAGACC--ATGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192354954 25 - 192460366 AGCCGGGAGCTGGAGAAGACC--ATGG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16327262 25 - 16847902 AGCCGGGAGCTGGAGAAGACC--ATGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91300316 25 + 91754291 AGCCGGGAGCTGGAGAAGACC--ATTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1340313 25 + 1977891 AGCCGGGAGCTGGAGAAGACC--ATGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7302923 25 - 7796314 AGCCGGGAGCTGGAGAAGACC--ATGG i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 6315668 25 + 6778120 AGCTGGGAGTTGGAGGAGGTC--ATTG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 149958 27 + 608964 AGCCATGAGTCAGAGAAGTCTTACTCA i otoGar3.GL873829 C 0 C 0 e canFam3.chr33 2283665 288 - 31377067 I a score=538374.000000 s hg38.chr3_KI270934v1_alt 1107 101 + 163458 GCTATATTCCTGCAACTGT-GCTTTTTCTAGGCGATTTGAAGCAGTGCTTATCAGGGG----CCTTCCTCTGTGGGAATCCTGCACCCCCATCTCTCTCTCCtt----------t---------------------------------------------t s panTro5.chr3 2462836 100 - 202621043 GCTATATTCCTGCAACTGT-GCTTTTTCTAGGCGATTTGAAGCAGTGCTTATCAGGGG----CCTTCCTCTGTGGGAATACTGCACTCCCAtctctctctcctt----------t---------------------------------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75871 101 - 190779 GCTATATTCCTGCAACTGT-GCTTTTTCTAGGCGATTTGAAGCAGTGCTTATCAGGGG----CCTTCCTCTGTGGGAATACTGCACTCCCAtctctctctcctt----------t---------------------------------------------t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 183611 101 + 189199 GCTATATTCCTGCAGCTGT-GCTTTTTCTAGGCGATTTGAAGCAGTGCTTATCAGGGG----CCTTCCTCTGTGGGAATCCTGCACCCCCATCTCTCTCTCCtt----------t---------------------------------------------t i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2774109 100 - 123690457 GCTATATTCCTGCGACTGT-GCTTTTTCTAGACGA-TTGAAGCAGTGCCTATCAGGGG----CCTTCCTCTGTGGGAATTCGGCACCCCTATCTCTCtctctct----------c---------------------------------------------t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2288995 101 - 204787373 GCTGTACTCCTGGGACTGT-GCTTTTTCTAGGCGATTTGAAGCAGTGCTTCTCAGGGG----CCTTCCTCCGTGGGGATCCTGCACCCCCATCtctctctctct----------c---------------------------------------------t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192354979 101 - 192460366 GCTGTACTCCTGGGACTGT-GCTTTTTCTAGGCGATTTGAAGCAGTGCTTCTCAGGGG----CCTTCCTCCGTGGGGATCCTGCACCCCCAtctctctctctct----------c---------------------------------------------t i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16327287 95 - 16847902 GCTGTACTCCTGGGACTGT-GC-TTTTCTAGGCAATTTGAAGCAGTGCTTCTCAGGGG----CCTTCCTCTGTGGGGATCCTGCACCCCCAtctctctctc------------------------------------------------------------ i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91300341 100 + 91754291 GCTATACTCCTGGGACTGT-GCTTTTTCTAGGCGATTTGAAGCAGTGCTTTTCAGGTG----CCTTCCTCTGTGGGGATCCTGCACCCCCATCtctctctctct--------------------------------------------------------t i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1340338 101 + 1977891 GCTGTACTCCTGGGACTGT-GCTTTTTCTAGGCAATTTGAAGCAGTGCTTCTCAGGGG----CCTTCCTCTGTGGGGATCCTGCACCCCCATCTCTCTCtttct----------c---------------------------------------------t i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7302948 102 - 7796314 GCTATATTCCTGGGACTGT-GCTTTTTCTAGGTGATTTGAAGCAGTGCTTTTCAGGGGCCTTCCTTCCTCTGTGGCAATCCTGCACCCCCAtctctctctctc---------------------------------------------------------- i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 6315693 145 + 6778120 GCCATATTCTGGGGACTGT--TTTTTTCTAGACAATTTGAAGCAGTGCTTATCAGGCC----CCTTCCTCTGTGGAAATCCTGCAccctcctctctctctccct----------ccccctccctctctctctctctctctccctccctctcttttctcttt i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 149985 112 + 608964 ATTTTATTCCTGGGATTTTTTTTTTTTTTTAACACTTTGAAGCAGCCCAGATCTGGTA----CCTTCCTCTATGAGAATCTGGCACTTGCACCTCTTATTCTTTATTGCAGAATT---------------------------------------------T i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2283953 100 - 31377067 GTTATATTTCTGAAATCTT-TTCTTTTGTA-ACAATTTGCAGCAGTCCTGATCAGGTG----CCTTACTCTGTAGGAATCCTGCACCTCCACCCTTTAGTCTTG----------T---------------------------------------------T i canFam3.chr33 I 288 I 3246 a score=230888.000000 s hg38.chr3_KI270934v1_alt 1208 57 + 163458 ttattttatttatttattttttttttgagacagaatcttgctctgtcgcccaggctg s panTro5.chr3 2462936 41 - 202621043 ----------------ttttttttttgagacagaatcttgctctgtcgcccaggctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75972 45 - 190779 tttt------------ttttttttttgagacagaatcttgctctgtcgcccaggctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 183712 49 + 189199 tttttttt--------ttttttttttgagacagaatcttgctctgtcgcccaggctg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2774209 51 - 123690457 ctcttttttt------ttttttttttgagacagaatcttgctctgtcgcccaggctg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2289096 48 - 204787373 ctctttt---------ttttttttttgagacagaatcttgctctgtcgcccaggctg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192355080 48 - 192460366 ctctttt---------ttttttttttgagacagaatcttgctctgtcgcccaggctg i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16327382 43 - 16847902 -----tt---------ttttttttttgagacagaatcttgctctgtcgcccaggctg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91300441 48 + 91754291 ttttttt---------ttttttttttgagacagactcttgctctgtcacccaggctg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1340439 48 + 1977891 ctctttt---------ttttttttttgagacagaatcttgctctgtcgcccaggctg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7303050 43 - 7796314 -----tc---------tcttttttttgagacagaatcttgctctgtcgcccaggctg i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 6315838 46 + 6778120 ttctttt---------ttttttctttgaggcag--tctctctctgttgcccaggctg i cebCap1.NW_016107444v1 C 0 I 19 s otoGar3.GL873829 150097 47 + 608964 TTCCTTA---------AGTTTCTCTCCAAGCTgggtgccgc-ctgtggctcagtggg i otoGar3.GL873829 C 0 C 0 e canFam3.chr33 2284053 3246 - 31377067 I a score=11106.000000 s hg38.chr3_KI270934v1_alt 1265 3 + 163458 cag s panTro5.chr3 2462977 3 - 202621043 cag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 76017 3 - 190779 cag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 183761 3 + 189199 cag i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2774260 3 - 123690457 cag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2289144 3 - 204787373 gag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192355128 3 - 192460366 gag i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16327425 3 - 16847902 gag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91300489 3 + 91754291 gag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1340487 3 + 1977891 gag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7303093 3 - 7796314 gag i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 150144 3 + 608964 cag i otoGar3.GL873829 C 0 I 3663 e cebCap1.NW_016107444v1 6315884 19 + 6778120 I e canFam3.chr33 2284053 3246 - 31377067 I a score=70253.000000 s hg38.chr3_KI270934v1_alt 1268 17 + 163458 tgaagtggcatgatgtc s panTro5.chr3 2462980 17 - 202621043 tgtagtggcatgatgtc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 76020 17 - 190779 tgtagtggcatgatgtc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 183764 17 + 189199 tgaagtggcatgatgtc i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2774263 17 - 123690457 tgcagtggcatgatctc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2289147 17 - 204787373 tgcagtggcgtgatctc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192355131 17 - 192460366 tgcagtggcgtgatctc i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16327428 17 - 16847902 tgcaatggcatgatctc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91300492 17 + 91754291 tgcagtggcgtgatctc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1340490 17 + 1977891 tgcaatggcgtgatctc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7303096 17 - 7796314 tgcagtggtgtgatctc i colAng1.NW_012118932v1 C 0 C 0 e cebCap1.NW_016107444v1 6315884 19 + 6778120 I e canFam3.chr33 2284053 3246 - 31377067 I e otoGar3.GL873829 150147 3663 + 608964 I a score=2516998.000000 s hg38.chr3_KI270934v1_alt 1285 489 + 163458 tgctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagccttttgagtaactgggattacaggcacccaccaccacgcccagctatttctgta-------tttttttttctagtagagacggggttttgccatattgcccaggctggtctcgcactcctgacctcaagtgatccacccatctcagcctcccaaagtgctgggattgcaggtggg-gctaccatgcccggccCCATCTCTTATTA---TTTTTTTATCCCCCAAATATGTACAGTTGTGATATATTAATTTTTCA-TTTTTTCTTtttatttcttttca--tttttactttaagtttcaggatacatgtgcagaacgtgcaggtttgttacacaggtatatatgtgccatggtggtttactgcacctatcaacccatca--------------cctgcatgtattagctatttatcctgacgctcttcctccccttgtcccgtccctgacaggcgccagtgtgtgt s panTro5.chr3 2462997 490 - 202621043 tgctcactgcaacctccacctcctgggttcaagcaaatctcctgcctcagccttttgagtaactgggattacaggcacccaccaccacgcccagctatttctgta-------tttttttttctagtagagacggggttttgccatgttgcccaggctggtctcgcactcctgacctcaagtgatccacccgtcttggcctcccaaagtgctgggattgcaggtggg-gctaccatgcccggccCCATCTCTTATTA---TTTTTTTATCCCCAAAATATGCACAATTGTGATATATTAATTTTTCA-TTTTTTCTTtttatttcttttca-ttttttactttaagtttcgggatacatgtgcagaacgtgcaggtttgttacacaggtatatatgtgccatggtggtttactgcacctatcaacccatca--------------cctgcatgtattagctatttatcctgacgcttttcctccccttgtcccgtccctgacaggcgccggtgtgtgt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 76037 488 - 190779 tgctcactgcaacctccacctcctgggttcaagcaaatctcctgcctcagccttttgagtaactgggattacaggcacccaccaccacgcccagctatttctgta--------ttttttttctagtagagacggggttttgccatgttgcccaggctggtctcgcactcctgacctcaagtgatccacccgtctcggcctcccaaagtgctgggattgcaggtggg-gctaccatgcccggccCCATCTCCTATTA---TTTTTTTATCCCCAAAATATGCACAATTGTGATATATTAATTTTTCA--TTTTTCTTtttatttcttttca-ttttttactttaagtttcgggatacatgtgcagaacgtgcaggtttgttacacaggtatatatgtgccatggtggtttactgcacctatcaacccatca--------------cctgcatgtattagctatttatcctgacgcttttcctccccttgtcccgtccctgacaggcgccggtgtgtgt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 183781 491 + 189199 tgctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagccttttgagtaactgggattacaggcacccaccaccacgcccagctattgctgta------ttttttttttctagtagagacggggttttgccatattgcccaggctggtctcgcactcctgacctcaagtgatccacccatctcggcctcccaaagtgctgggattgccggtggg-gctaccgtgcccggccCCATCTCTTATTA---TTTTTTTATCCCCCAAATATGTACAATTGTGATATATTAATTTTTCA-TTTTTTCTTtttatttcttttca-ttttttactttacgtttcgggatacgtgtgcagaacgtgcaggtttgttacacaggtatatatgtgccatggtggtctactgcacccatcaacccatca--------------cctgcatgtattagctatttatcctgacgctcttcctccccttgtcccgtccctgacaggcgccggtgtgtgt i gorGor5.CYUI01000254v1 C 0 I 563 s nomLeu3.chr11 2774280 494 - 123690457 tgctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagccttttgagtagctgggattacaggaacccaccaccatgcccagccatttctgtat-----ttttttttttctagtagagatggggttttgccatgttgcctgggctggtcttgcactcctgacctcaagtgatccactcatctcggcctcccaaagtgctcggattgcaggtggg-actaccatgcctggtcCCATCTCTTATTA---TTTTTTTATCCCTCAAATATGTACAATTGTGATATATTAATTTTTCATTTTTTTCTTTTTAtttcttttcatttttttactttaagtttcgggatacatgtgcagaacgtgcaggtttgttacacaggtatatatgtgccatggtggtttactgcacctatcaacccatca--------------cctgcatacattagctatttatcctgacgctcttcctccccttgtcccgcccctgacaggcgctggtgtgtgt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2289164 486 - 204787373 tgctcactgcgacctccacctcctgggttcaagtgattctcctgcctcagagttttgagtagctgggattacaggcacccgccaccatgcccagccatttttgta------ttttttttttctggtagagacggggttttgtcatgttgcccaggctggtctcgcagtcctgacctcaagtgatccactcacctcggcctcccaaagtgctgggattgcaggtgggagctaccatgcccagccCTATCTCTTATTA----TTTTTTATTCCCCAAATATGTACAATTGCAATATATTAATTTTTCA-TTTTTTCTttttatttcac-----ttttttactttaagtttcgagatacatgtgcagcaaatgcaggtttgttacataggtatatgtgtgtcatggtggtttgctacacctatcaacccatca--------------cttgcatgcattagctatttatcctgacactcttcctccccttgtcccgccccctacagg-cctggtatgtgc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192355148 486 - 192460366 tgctcactgcgacctccacctcctgggttcaagtgattctcctgcctcagagttttgagtagctgggattacaggcacccgccaccatgcccagccatttctgta------ttttttttttctggtagagacggggttttgtcatgttgcccaggctggtctcacactcctgacctcaagtgatccactcgcctcggcctcccaaagtgctgggattgcaggtgggagctaccatgcccagccCTATCTCTTATTA----TTTTTTATTCCCCAAATATGTACAATTGCAATATATTAATTTTTCA-TTTTTTCTttttatttcac-----ttttttactttaagtttcgagatacatgtgcagcaaatgcaggtttgttacataggtatatgtgtgtcatggtggtttgctacacctatcaacccatca--------------cttgcatgcattagctatttatcctgacactcttcctccccttgtcccgccccctacagg-cctggtatgtgc i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16327445 486 - 16847902 tgctcactgcgacctccacctcctgggttcaagtgattctcctgcctcagagttttgagtagctgggattacaggcacccgccaccatgcccagccatttttgta-------tttttttttctggtagagacggggttttgtcatgttgcccaggctggtctcgcactcctgacctcaagtgatccactcgcctcggcctcccaaagtgctgggattgcaggtgggagctaccatgcccagtcCTATCTCTTATTA----TTTTTTATTCCCCAAATATGTACAATTGCAATATATTAATTTTTCA-TTTTttctttttatttcac-----ttttttactttaagttttgagatacatgtgcagcaaatgcacgtttgttaaataggtatatgtgtgtcatggtggtttgctacacctatcaacccatca--------------cttgcatgcattagctatttatcctgacactcttcctccccttgtcccgccccctataggccctggtatgtgc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91300509 487 + 91754291 tgctcactgcgacctccacctcctgggttcaagtgattctcctgcctcagagttttgagtagctgggattacaggcacccgccagcatgcccagccatttctgta-------tttttttttctggtagagacagggttttgtcatgctgcccaggctggtctcgcactcctgacctcaagtgatccactcgcctcggcctcccaaagtgctgggattgcaggtggaagctaccatgcccagccCTATCTCTTATTA---TTTTTTTATTCCCCAAATATGTACAATTGCAATATATTAATTTTTCA-TTTTTTCTttttatttcac-----ttttttactttaagtttcgagatacatgtgcagcaaatgcaggtttgttacataggtatatgtgtgccatggtggtttgctacacctatcaacccatca--------------cttgcatgcattagctatttatcctgacactcttcctccccttgtcccgccccctacaggccctgggatgtgc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1340507 486 + 1977891 tgctcactgcgacctccacctcctgggttcaagtgattctcctgcctcagagttttgagtagctgggattacaggcacccgccaccatgcccagccatttttgta-------tttttttttctggtagagacgggattttgtcatgttgcccaggctggtctcgcactcctgacctcaagtgatccactcgcctcggcctcccaaagtgctgggattgcaggtgggagctaccatgcccagccCTATCTCTTATTA----TTTTTTATTCCCCAAATATGTACAATTGCAATATATTAATTTTTCA-ttttttctttttatttcac-----ttttttactttaagttttgagatacatgtgcagcaaatgcacgtttgttaaataggtatatgtgtgtcatggtggtttgctacacctatcaacccatca--------------cttgcatgcattagctatttatcctgacactcttcctccccttgtcccgccccctacaggccctggtatgtgc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7303113 484 - 7796314 tgctcactgcgacctccacctcctgggttcaagtgattctcctgcctcagagttttgagtagctgggattacaggcacccgccaccatgcccagccatttctgta------ttttttttttctggtagaaacggggttttgtcatgttgcccaggctggtctcgcactcctgacctcaaggaatccactcgcctcggcctcccaaagtgctgggattgcaggtgggagctaccatgcccagccCTATCTCTTATTA----CTTTTTATTCCCCAAATATGTACAATTGCAATATATTAATTTTTCA-TTTTTTC---TTATTTCAT-----Ttttttactttaagtttcgagatacatgtgcagcaaatgcaggtttgttacacaagtatatgtgtgtcatggtggtttgctacacctatcaacccatca--------------cctgcatgcattagctatttatcctgacactcttcctccccttgtccggccccctacaggccctggtatgtgc i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 6315903 497 + 6778120 tgctcactgcatcctccacctcctgggttcaagtgatgctcctgcctcagcctttggagtagctgggattacaggcacctgctgcctcactcagctatttttgtattattatgttttaatattagtagagacagggcttcaccatgttgcccaggctggtctcaaactcctgacctcaagtgatcctcctgcctcggcctcccaaaatgctgggattgcagtagtgagttaccgtgcccagccCCATCTCTTATTATTATTTTTTTATCCCCCAAATATGCACAATTGTGATTTACCA---TTtta-ttttctttt---------------tttttaactttaa-ttctgggacacatgtgcagcacatgcaggtttgttacataagcatatgtgtgccatggtggtttgctgcacctatcaacccatcatgtaggctttaagctccgcatgcattacctgtgtatcctgatgctctctctccccttaccccgcccccagcaggccccagtgtgtga i cebCap1.NW_016107444v1 I 19 C 0 e canFam3.chr33 2284053 3246 - 31377067 I e otoGar3.GL873829 150147 3663 + 608964 I a score=3135623.000000 s hg38.chr3_KI270934v1_alt 1774 566 + 163458 tgttcccctctctgtgtccatgtgttctcattgttcaactccaacttatgagtgaaaacatgcagtgtttggttttctgttcccctgttagtttgttgaggatgatggctttcagcttcatccatgtacctgcaaaggacgtgatcccattcc-tttttcatggctgcatagtattccgtgctgcatatgtaccacattttctttatccagtctatcactgatggacatttgggttggtttcatgtctttactattgtaaatagtgctgcagtaaacatacgtgtgcatgtatctttataacagaatgatttatattcctttgggcatatacccagtaatgggattgctgggtcaaatggtatttctggttctagatccttgaggaatcgccacactgtcttccacaatggttgaactgatttacactcccaccaacagtgtaaaagcgttcctatttcaccacagccttgccagcatctgctgtttcttgactttttaataattgccattctgagtggtgtgagatgatatccctttgtagttttgatttgcatttctctaatgat s panTro5.chr3 2463487 566 - 202621043 tgttcccctccctgtgtccaagtgttctcattgttcaactccaacttatgagtgaaaacatgcagtgtttggttttctgttcccctgttagtttgttgaggatgatggcttccagcttcatccatgtacctgcaaaggatgtgatcccattcc-ttttttatggctgcatagtattccgtgctgcatatgtaccacattttctttatccagtctatcactgatggacatttgggttggtttcatgtctttactattgtgaatagtgctgcagtaaacatacgtgtgcatgtatctttataacagaatgatttatattcctttgggcatatacccagtaatgggattgctgggtcaaatggtatttctggttctagatccttgaggaatcgccacactgtcttccacaatggttgaactgatttacactcccaccaacagtgtaaaagtgttcctatttcaccacagccttgccagcatctgctgtttcttgactttttaataattgccattctgactggtgtgagatgatatcccattgtagttttgatttgcatttctctaatgat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 76525 566 - 190779 tgttcccctccctgtgtccaagtgttctcattgttcaactccaacttatgagtgaaaacatgcagtgtttggttttctgttcccctgttagtttgttgaggatgatggcttccagcttcatccatgtacctgcaaaggatgtgatcccattcc-ttttttatggctgcatagtattccgtgctgcatatgtaccacattttctttatccagtctatcactgatggacatttgggttggtttcatgtctttactattgtgaatagtgctgcagtaaacatacgtgtgcatgtatctttataacagaatgatttatattcctttgggcatatacccagtaatgggattgctgggtcaaatggtatttctggttctagatccttgaggaatcgccacactgtcttccacaatggttgaactgatttacactcccaccaacagtgtaaaagtgttcctatttcaccacagccttgccagcatctgctgtttcttgactttttaataattgccattctgactggtgtgagatgatatcccattgtagttttgatttgcatttctctaatgat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 184835 566 + 189199 tgttcccctccctgtgtccatgtgttctcattgttcaactccaacttatgagtgaaaacatgcagtgtttggttttctgttcccctgttagtttgttgaggatgatggctttcagcttcatccatgtacctgcaaaggacgtgatcccattcc-ttttttatggctgcatagtattccgtgctgcatatgtaccacattttctttatccagtctatcactgatggacatttgggttggtttcatgtctttactactgtgaatagtgctgcagtaaacatacgtgtgcatgtatctttataacagaatgatttatattcctctgggcatatacccagtaatgagattgctgggtcaaatggtatttctggttctagatccttgaggaatcgccacactgtcttccacaatggttgaactgatttacactcccaccaacagtgtaaaagcgttcctatttcaccacagccttgccagcatctgctgtttcttgactttttaataattgccattctgactggtgtgagatgatatcccattttagttttgatttgcatttctctaatgat i gorGor5.CYUI01000254v1 I 563 C 0 s nomLeu3.chr11 2774774 566 - 123690457 tgttcccctccctgggtccatgtgttctcattgttccactccaacttctgagtgagaacatgcagtgtttggttttctgttcctctgttactttgttgaggatgatggctttcagcttcatccatgtacctgcaaaggacatgatcccattcc-ttttttatggctgcatagtattctgtgctgtatatgtaccacattttctttatccagtctatcactgatggacatttgggttggtttcatgtctttactattgtgaatagtgctgcagtaaagatacatgtacatgtatccttataacagaatgatttatattcctttgggcatatacccagtaatgggattgctgggtcaaatggtatttctggttctagatccttgaggaatcaccacactgtcttccacaatggttgaactaatttacactcccaccaagagtgtaaaaccgttcctatttcaccacagccttgccagcatctgctgtttcttgactttttaataattgccattctgactggcgggagatgatatcccattgtggttttgatttgcatttccctaatgat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2289650 563 - 204787373 tgttcccctccctgtgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgcagtgtgtggttttctgttcgtgtgttagtttgctgag---gatgtcttccagcttcatccatgtccctgcaaaggacatgatcccattcctttttttatggctgcatagtattccatgctgtatatgtaccacattttctttatccagtctgtcagtgatggacatttgggttggtttcatgtctttactattgtgaatagtgctgcaataaacatacatgtgcatgtatctttataatggaa-gatttatattcctttgggtatatagccagtaatgggatggctgagtcaaacggtatttctggttttagatccttgaggaatccccacactgtcttccacaatggttgaactgatttacattcccaccaagagtgtaaaagcgttcatatttctccacagctttgccagcatctgctgtttcttgactttttaataattgccattctgactggcgtgagatggtattccattgtggttttgatttgcatttctctaatgat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192355634 563 - 192460366 tgttcccctccctgtgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgcagtgtgtggttttctgttcgtgtgttagtttgctgag---gatgtcttccagcttcatccatgtccctgcaaaggacatgatcccattcctttttttatggctgcatagtattccatgctgtatatgtaccacattttctttatccagtctgtcagtgatggacatttgggttggtttcatgtctttactattgtgaatagtgctgcaataaacatacatgtgcatgtatctttataacggaa-gatttatattcctttgggtatatagccagtaatgggatggctgagtcaaatggtatttctggttttagatccttgaggaatccccacactgtcttccacaatggttgaactgatttacattcccaccaagagtgtaaaagcgttcatatttctccacagccttgccagcatctgctgtttcttgactttttaataattgccattctgactggtgtgagatggtatcccattgtggttttgatttgcatttctctaatgat i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16327931 566 - 16847902 tgttcccctccctgtgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgcagtgtgtggttttctgttcgtgtgttagtttgctgaggatgatgtcttccagcttcatccatgtccctgcaaaagacatgatcccattcctttttttatggctgcatagtattccatgctgtatatgtaccacattttctttatccagtctgtcagtgatggacatttgggttggtttcatgtctttactattgtgaatagtgctgcaataaacatacatgtgcatgtatctttataacggaa-gatttatattcctttgggtatatagccagtaatgggatggctgagtcaaatggtatttctggttttagatccttgaggaatccccacactgtcttccacaatggttgaactgatttacattcccaccaagagtgtaaaagcgttcatatttctccacagccttgccagcacctgctgtttcttgactttttaataattgccattctgactggcgtgagatgatattccattgtggttttgatttgcatttctctaatgat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91300996 567 + 91754291 tgttcccctccctgtgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgcagtgtgtggttttctgttcgtgtgttagtttgctgaggatgatgtcttccagcttcatccatgtccctgcaaaagacatgatcccattcctttttttatggctgcatagtattccatgctgtatatgtaccacattttctttatccagtctgtcagtgatggacatttgggttggtttcatgtctttactattgtgaataatgctgcaataaacatacatgtgcatgtatctttataacggaatgatttatattcctttgggtatatacccagtaatgggatggctgagtcaaatggtatttctggttctagatccttgaggaatccccacactgtcttccacaatggttgaactgatttacattcccaccaagagtgtaaaagtgttcgtatttctccacagccttgccagcatctgctgtttcttgactttttaataattgccattctgactggcgtgagatggtatcccattgtggttttgatttgcatttctctaatgat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1340993 565 + 1977891 tg-tcccctccctgtgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgcagtgtgtggttttctgttcgtgtgttagtttgctgaggatgatgtcttccagcttcatccatgtccctgcaaaagacatgatcccattcctttttttatggctgcatagtattccatgctgtatatgtaccacattttctttatccagtctgtcagtgatggacatttgggttggtttcatgtctttactattgtgaatagtgctgcaataaacatacatgtgcatgtatctttataacggaa-gatttatattcctttgggtatatagccagtaatgggatggctgagtcaaatggtatttctggttttagatccttgaggaatccccacactgtcttccacaatggttgaactgatttacattcccaccaagagtgtaaaagcgttcatatttctccacagccttgccagcacctgctgtttcttgactttttaataattgccattctgactggcgtgagatgatattccattgtggttttgatttgcatttctctaatgat i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7303597 565 - 7796314 tgttcccctccctgtgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgcagtgtgtggttttctgttcctgtgttagtttgctgaggatgatgtcttccagcttcatccatgtccctgcaaaggacatgatcccattcctttttttatggctgcatagtattccatgctgtatatgtaccaca-tttctttatccagtctgtcactgatggacatttgggttggttttatgtctttactattgtgaatagtgctgcagtaaacatacatgtgcatgtatctttataacggaatgatttatattcctttgggtatgtacccagtaatgggatgactgagtcaaatgatatttctggttctagatccttgaggaatccccacactgtcttccacaatggttgaactgatttacattcccaccaagagtgtaaaagca-tcgtatttctccatagccttgccagcatctgctgtttcttgactttttaataattgccattctgactggcgtgagatggtatcccattgtggttttgatttgcatttctctaatgat i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 6316400 560 + 6778120 tgttcccctccctgtgtcaatgtgttctcattattcaactcccacttatgagtgagaacgtg--gcatttgtttttctcttcctgtgttggtttgctgaggatgatggcttccagcttcatccatgtccctgcaaaggacatgatcccatgcc--tttttatggctgcatagtattccattgtgtatatgtaccacattttctttatccagtctatcattgaaggacatttgggttggttccatgtctttactgcatggaatagtgctgcaataaacatatgtgtgcatgtatatttataacagaatgatttatattcctttggg--tgtacccagtaatgggattgctgggtcaaatggtatttcttgctctagatccttgaggaatcaccacactgtcttccacagtggttgaactgatttacattcccaccagcagtgtaaaagt-ctcctgcttctccatagccttgccagcacctgttgtttcttgactttttaataactgccattctgactgaagtgagatggtatctcattgtggttttaatttgcatttctctaatgat i cebCap1.NW_016107444v1 C 0 I 8388 e canFam3.chr33 2284053 3246 - 31377067 I e otoGar3.GL873829 150147 3663 + 608964 I a score=552021.000000 s hg38.chr3_KI270934v1_alt 2340 130 + 163458 ccatgatgatgagccttttttcatatgtttgttggtggcataaatgtcttcttttgataagtgtctgttcatatcctttgcctgctttttgatggggttgtttatttttttcttgtaaatttaagttcct s panTro5.chr3 2464053 130 - 202621043 ccatgatgatgagctttttttcatatgtttgttggtggcataaatgtcttcttttgataagtgtctgttcatatcctttgcctgctttttgatggggttgtttatttttttcttgtaaatttaagttcct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 77091 130 - 190779 ccatgatgatgaactttttttcatatgtttgttggtggcataaatgtcttcttttgataagtgtctgttcatatcctttgcctgctttttgatggggttgtttatttttttcttgtaaatttaagttcct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 185401 130 + 189199 ccatgatgatgagctttttttcatatgtttgttggtggcataaatgtcttcttttgataagtgtctgttcatatcctttgcccgctttttgatggggttgtttatttttttcttgtaaatttaagttcct i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2775340 128 - 123690457 ccatgatgatgagcttttttgc--atgttggttggtggcataaatgtcttcttttgataagtgtctgttcatatcctttgcccgctttctgatggggttgtttatttttttctcgtaaatttaacttcct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2290213 126 - 204787373 ccatgattataagctttttttcatatgtttgctggtggcataaatgtcttcttttgataagtgccta-tcatatcctttgcccactttttgatgggtttgt---tttttgtcttgtaaatttaaattcct i rheMac8.chr2 C 0 I 5328 s macFas5.chr2 192356197 126 - 192460366 ccatgattataagctttttttcatatgtttgctggtggcataaatgtcttcttttgataagtgccta-tcatatcctttgcccactttttgatgggtttgt---tttttgtcttgtaaatttaaattcct i macFas5.chr2 C 0 I 5347 s cerAty1.NW_012004056v1 16328497 126 - 16847902 ccatgattataagctttttttcatatgtttgctggtggcataaatgtcttcttttgataagtgccta-tcatatcctttgcccactttttgatgggtttgt---tttttgtcttgtaaatttaagttcct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91301563 126 + 91754291 ccatgattataagctttttttcatatgtttgctggcggcataaatgtcttcttttgataagtgccta-tcatattctttgcccactttttgatgggtttgt---tttttgtcttgtaaatttaagttcct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1341558 126 + 1977891 ccatgattataagctttttttcatatgtttgctggtggcataaatgtcttcttttgataagttccta-tcatatcctttgcccactttttgaggggtttgt---tttttgtcttgtaaatttaagttcct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7304162 126 - 7796314 ccatgattataagctttttttcatatgtttgctgatggcatacatgtcttcttttgataagtgcctg-tcgtatcctgtgcccactttttgatgaggttgt---tttttgtcttgtaaatttaagttcct i colAng1.NW_012118932v1 C 0 C 0 e cebCap1.NW_016107444v1 6316960 8388 + 6778120 I e canFam3.chr33 2284053 3246 - 31377067 I e otoGar3.GL873829 150147 3663 + 608964 I a score=287400.000000 s hg38.chr3_KI270934v1_alt 2470 96 + 163458 tgtaaattctggatattagacctctgtcagatggttagattgcaaaaattttctcattttgtaggttgcctgtttgctctgatgatagtttctttt s panTro5.chr3 2464183 96 - 202621043 tgtaaattctggatattagacctctgtcagatggttagattgcaaaaattttctcattttgtaggttgcctgtttgcgctgatgatagtttctttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 77221 96 - 190779 tgtaaattctggatattagacctctgtcagatggttagattgcaaaaattttctcattttgtaggttgcctgtttgcgctgatgatagtttctttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 185531 96 + 189199 tgtaaattctggatattagacctctgtcagatggttagattgcaaaaattttctcattttttaggttgcctgtttgctctgatgatagtttctttt i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 2775468 96 - 123690457 tgtaaattcgggatattagacctctgtcagatggttagattgcaaaaattttctcatttcacaggttgcctgtttgctctgataataatttctttt i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16328623 96 - 16847902 ggtaaattctggatattagacctctctcagatgggtagattgcaaaaattttctcattttgtaggtttcctgtttgctctgatgatagtttctttt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91301689 96 + 91754291 gataaattctgtatattagacctctctcagatgggtagattgcaaaaattttctcattttgtaggttgcctgtttgctctgatgatagtttctttt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1341684 96 + 1977891 ggtaaattctggatattagacctctctcagatgggtagattgcaaaaattttctcattttgtaggtttcctgtttgctctgatgatagtttctttt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7304288 96 - 7796314 ggtaaattctggatgttagacctctctcagatgggtagtctgcaaaaagtttctcgttttgtaggttgccggtttgctctgatgatagtttctttt i colAng1.NW_012118932v1 C 0 C 0 e cebCap1.NW_016107444v1 6316960 8388 + 6778120 I e canFam3.chr33 2284053 3246 - 31377067 I e otoGar3.GL873829 150147 3663 + 608964 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=1183506.000000 s hg38.chr3_KI270934v1_alt 2566 482 + 163458 gctgtgcagagctctttagtttaattagatcccatttgtcaattttagcttttgttgcaagtgcttttggagatttcatcataaaatctttgcctatgtctatgtcctgaatggtattgcctaggttttcttctagggttttcatggtttggggttttacatgtaagtctttaacctgccttgagttaatttttgtataaggtgtaaggaaggggtccagtttcagttttctgcatatggctaaccagttttcccagcaccatttattgaatagagaatcctttccccattgcctgcttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtcttatttccaaggtatctattctgttccattggtttatatgtcagttttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagcctcccactttgttctttttgcttaggattg s panTro5.chr3 2464279 482 - 202621043 gctgtgcagagctctttagtttaattagatcccatttgtcaattttggcttttgttgcaagtgcttttggagatttcatcataaaatctttgcctatgtctatgtcctgaatggtattgcctaggttttcttctagggttttcatggtttggggttttacatgtaagtctttaacccgccttgagttaatttttgtataaggtgtaaggaaggggtccagtttcagttttctgcatatggctaaccagttttcccagcaccatttattgaatagagaatcctttccccattgcctgcttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtcttatttccaaggtatctattctgttccattggtctatatgtcagttttggtatcagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagcctcctactttgttctttttgcttactattg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 77317 482 - 190779 gctgtgcagagctctttagtttaattagatcccatttgtcaattttggcttttgttgcaagtgcttttggagatttcatcataaaatctttgcctatgtctatgtcctgaatggtattgcctaggttttcttctagggttttcatggtttggggttttacatgtaagtctttaacccgccttgagttaatttttgtataaggtgtaaggaaggggtccagtttcagttttctgcatatggctaaccagttttcccagcaccatttattgaatagagaatcctttccccattgcctgcttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtcttatttccaaggtatctattctgttccattggtctatatgtcagttttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagcctcctactttgttctttttgcttaccattg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 185627 482 + 189199 gctatgcagagctctttagtttaattagatcccatttgtcaattttagcttttgttgcaagtgcttttggagatttcatcataaaatctttgcctatgtctatgtcctgaatggtattgcctaggttttcttctagggttttcatggtttggggttttacatgtaagtctttaacctgccttgagttaatttttgtataaggtgtaaggaaggggtccagtttcagttttctgcatatggctaaccagttttcccagcaccatttgttgaatagagaatcctttccccatcgcctgcttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtcttatttccaaggtatctattctgttccattggtttatatgtcagttttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagcctcccactttgttctttttgcttaggattg i gorGor5.CYUI01000254v1 C 0 C 0 s cerAty1.NW_012004056v1 16328719 477 - 16847902 gctgtgcagagctctttagtttaattagatcccatttgtctattttatcttttattgcaattgcttttggagatttcatcataaaatctttgcccattcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggtttggggctttacatttaagtctttagtccaccttgagttaatttttgtataaggtgtaaggaaggggtccagtttcagttttctgcatatggctagccagttttcccagcaccatttat----tagagaatcctttccccattgcttgcttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtcttatttccaaggtctctattctg-tccattggtctatatgtcagttttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagcctcccactttgttctttttgcctaggattg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91301785 477 + 91754291 gctgtgcagagctctttagtttaattagatcccatttgtctattttatcttttattgcaattgcttttggagatttcatcataaaatctttgcccattcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggtttggagctttacatttaagtctttagtccaccttgagttaatttttgtataaggtgtaaggaaggggtccagtttcagttttctgcatatggctagccagttttcccagcaccatttat----tagagaatcctttccccattgcttgcttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtcttatttccaaggtctctattctg-tccattggtctatatgtcagttttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagcctcccactttgttctttttgcctaggattg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1341780 477 + 1977891 gttgtgcagagctctttagtttaattagatcccatttgtctattttatcttttattgcaattgcttttggagatttcatcataaaatctttgcccattcctatgtcctaaatggtattgcctaggttttcttctagggtttttatggtttggggctttacatttaagtctttagtccaccttgagttaatttttgtataaggtgtaaggaaggggtccagtttcagttttctgcatatggctagccagttttcccagcaccatttat----tagagaatcctttccccattgcttgcttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtcttatttccaaggtctctattctg-tccattggtctatatgtcagttttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagcctcccactttgttctttttgcctaggattg i manLeu1.NW_012102020v1 C 0 I 16110 s colAng1.NW_012118932v1 7304384 477 - 7796314 gctgtgcagagctctttagtttaattagatcccatttgttgattttagcttttattgcaattgcttttggagatttcatcataaaatctttgcccattcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggtttggggctttacatttaagtctttagtccaccttgagttaatatttgtataaggtgtaaggaaggggtccagtttcagttttctgcatatggctagccagttttcccagcaccatttat----tagagaaatctttccccattgcttgcttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtcttatttccaaggtctctattctg-tccattggtctatatgtcagttttggtaccagtaccatgctgctttggttactgtagccttgtagtatagtttgaagtcaggtagcctcccactttgttctttttgcctaggattg i colAng1.NW_012118932v1 C 0 C 0 e cebCap1.NW_016107444v1 6316960 8388 + 6778120 I e canFam3.chr33 2284053 3246 - 31377067 I e otoGar3.GL873829 150147 3663 + 608964 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=148591.000000 s hg38.chr3_KI270934v1_alt 3048 79 + 163458 tcttggctatttgggttcttttttgattccatatgaattttaaagtagtttgttctcattctgtgaagaatggtagttt s panTro5.chr3 2464761 79 - 202621043 tcttggctatttgggttcttttttgattccatatgaattttaaagtagtttgttctcattctgtgaagaatggtagttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 77799 79 - 190779 tcttggctatttgggttcttttttgattccatatgaattttaaagtagtttgttctcattctgtgaagaatggtagttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 186109 79 + 189199 tcttggctatttgggttcttttttgattccatatgaattttaaagtagtttgttctcattctgtgaagaatggtagttt i gorGor5.CYUI01000254v1 C 0 C 0 s cerAty1.NW_012004056v1 16329196 79 - 16847902 tcttggttattcgggctcttttttggttccatatgaattttaaagtagtttgttctcattctgtgaagaatggtagttt i cerAty1.NW_012004056v1 C 0 I 7130 s chlSab2.chr15 91302262 79 + 91754291 tcttggttattcgggctcttttttggttccatatgaattttaaagtagtttgttctcattctttgaagaatggtagttt i chlSab2.chr15 C 0 I 5969 s colAng1.NW_012118932v1 7304861 79 - 7796314 tcttggctattcgggctcttttttggttccatatgaattttaaagtagtttgttctcattctgtgaagaatggtagttt i colAng1.NW_012118932v1 C 0 I 7473 e cebCap1.NW_016107444v1 6316960 8388 + 6778120 I e canFam3.chr33 2284053 3246 - 31377067 I e otoGar3.GL873829 150147 3663 + 608964 I e manLeu1.NW_012102020v1 1342257 16110 + 1977891 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=57036.000000 s hg38.chr3_KI270934v1_alt 3127 101 + 163458 tcacatcctttgttagctgtattcctaggtattttattctatttgtagcaattgtgaataggagttcattcatgatttagctctctgcttgcctattttgg s panTro5.chr3 2464840 101 - 202621043 tcacatcctttgttagctgtattcctaggtattttattctatttgtagcaattgtgaataggagttcattcatgatttagctctctgcttgcctattttgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 77878 101 - 190779 tcacatcctttgttagctgtattcctaggtattttattctatttgtagcaattgtgaataggagttcattcatgatttagctctctgcttgcctattttgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 186188 101 + 189199 tcacatcctttgttagctgtattcctaggtattttattctatttgtagcaattgtgaataggagttcattcatgatttagctctctgcttgcctattttgg i gorGor5.CYUI01000254v1 C 0 C 0 e cebCap1.NW_016107444v1 6316960 8388 + 6778120 I e canFam3.chr33 2284053 3246 - 31377067 I e otoGar3.GL873829 150147 3663 + 608964 I e colAng1.NW_012118932v1 7304940 7473 - 7796314 I e manLeu1.NW_012102020v1 1342257 16110 + 1977891 I e chlSab2.chr15 91302341 5969 + 91754291 I e cerAty1.NW_012004056v1 16329275 7130 - 16847902 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=2385.000000 s hg38.chr3_KI270934v1_alt 3228 2 + 163458 tT s panTro5.chr3 2464941 2 - 202621043 tT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 77979 2 - 190779 tT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 186289 2 + 189199 tT i gorGor5.CYUI01000254v1 C 0 C 0 s calJac3.chr17 73787656 2 + 74750902 TC i calJac3.chr17 N 0 C 0 s saiBol1.JH378146 17238910 2 - 17725628 TC i saiBol1.JH378146 N 0 C 0 s otoGar3.GL873829 153810 2 + 608964 TC i otoGar3.GL873829 I 3663 C 0 e cebCap1.NW_016107444v1 6316960 8388 + 6778120 I e canFam3.chr33 2284053 3246 - 31377067 I e colAng1.NW_012118932v1 7304940 7473 - 7796314 I e manLeu1.NW_012102020v1 1342257 16110 + 1977891 I e chlSab2.chr15 91302341 5969 + 91754291 I e cerAty1.NW_012004056v1 16329275 7130 - 16847902 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=16731.000000 s hg38.chr3_KI270934v1_alt 3230 3 + 163458 CAC s panTro5.chr3 2464943 3 - 202621043 CAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 77981 3 - 190779 CAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 186291 3 + 189199 CAC i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19096779 3 - 19675229 CAC i macNem1.NW_012014355v1 N 0 C 0 s chlSab2.chr15 91308310 3 + 91754291 CAC i chlSab2.chr15 I 5969 C 0 s colAng1.NW_012118932v1 7312413 3 - 7796314 CAC i colAng1.NW_012118932v1 I 7473 C 0 s calJac3.chr17 73787658 3 + 74750902 CAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17238912 3 - 17725628 CAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6325348 3 + 6778120 CAC i cebCap1.NW_016107444v1 I 8388 C 0 s otoGar3.GL873829 153812 3 + 608964 CAG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2287299 3 - 31377067 CAC i canFam3.chr33 I 3246 C 0 e manLeu1.NW_012102020v1 1342257 16110 + 1977891 I e cerAty1.NW_012004056v1 16329275 7130 - 16847902 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=817317.000000 s hg38.chr3_KI270934v1_alt 3233 142 + 163458 TCCAGGAACCACAGAGGACACATTAATAACTGGAAGTAAAACTGCTGCCCCAGTCACCTCAACAGGCTCAACAACAGCGACACTAGAGGGACAATCAACTGCAGCTTCTTCAAGGACCTCTAATCAGGACATATCAGCTTCA s panTro5.chr3 2464946 142 - 202621043 TCCAGGAACCACAGAGGACACATTAACAACTGGAAGTAAAACTCCTGCCCCAGTCACCTCAACAGGCTCAACAACAGTGACACTAGAGGGACAATCAACTGCAGCTTCTTCAAGGACCTCTAATCAGGACATATCAGCTTCA i panTro5.chr3 C 0 I 128 s panPan2.chrUn_NW_014024201v1 77984 142 - 190779 TCCAGGAACCACAGAGGACACATTAACAACTGGAAGTAAAACTCCTGCCCCAGTCACCTCAACAGGCTCAACAACAGTGACACTAGAGGGACAATCAACTGCAGCTTCTTCAAGGACCTCTAATCAGGACATATCAGCTTCA i panPan2.chrUn_NW_014024201v1 C 0 I 128 s gorGor5.CYUI01000254v1 186294 142 + 189199 TCCAGGAACCACAGAGGACACATTAACAACTGGAAGTAAAACTCCTGCCCCAGTCACCTCAACAGGCTCAACAACAGCGACACTAGAGGGACAATCAACTACAGCTTCTTCAAGGACCTCTAATCAGGACATATCAGCTTCA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19096782 142 - 19675229 TCCAGGAACCACAGGGGAAACATCAACAACTGGAAGTAAAAATCCTACCGCAGTCACCTCAGCAGGCTCAGTAGCAATGACACTAGAGGGACAATCAACTGCAGCTTCTTCAAGGACCTCTAATCAGGACATATCAGCTTCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16336405 142 - 16847902 TCCGGGAACCACAGGGGAAACATCAACAACTGGAAGTAAAACTCCTGCCGCAGTTATCTCAGCAGGCTCAGCAGCAGTGACACTCGAGGGACAATCAACTGCCACTTCTTCAAGGACCTCTAATCAGGACATATCAGCTTCA i cerAty1.NW_012004056v1 I 7130 C 0 s chlSab2.chr15 91308313 139 + 91754291 TCCAGGAACCACAGGGGAAA---CAACAACTGGAAGTAAAAATCCTACTGCAGTCACCTCAGCAGGCTCAGTAGCAATGACACTAGAGGGACAATCAACTGCAACTTATTCAAGGACCTCTAATCAGGACATATCAGCTTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1358367 142 + 1977891 TCCGGGAACCACAGGGGAAACATCAACAACTGGAAGTAAAACTCCTGCCGCAGTCATCTCAGTAGGCTCAGCAGCAGTGACACTCGAGGGACAATCAACTGCCACTTCTTCAAGGACCTCTAATCAGGACATATCAGCTTCA i manLeu1.NW_012102020v1 I 16110 C 0 s colAng1.NW_012118932v1 7312416 142 - 7796314 TCCAGGAACCACAGGGGAAACATCAACAACTGGAAGTAAAAATCCTACTGCAGTCACCTCAGCAGGCTCAGCAGCAATGACACTAGAGGGACAATCAACTGCAACTTCTTCAAGGACCTCTAATCAGGACATATCAGCTTCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73787661 142 + 74750902 TCCAGGAAGCACAGAGGAAACATCAACAACTGGAAGTGAAAACACTGCCCTAGTCACCTCAGCAGGCTCGATAACAGCTACACTAGAGGGACAATCAACAGCAACTTCTTTAAGAACCTCTAATCAGGGAATATCAGCTTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17238915 142 - 17725628 TCCAGGAACCACAGAGGAAACATCAACACCTGGAAGGGAAAACACGGCCCTCATCCCCTCAGCAGGCTCAGTAACAGCTACGCTAGCGGGACAATCAACAGCAACTTCTTTGAGAACCTCTAATCAGGAAATATCAGCTTCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6325351 139 + 6778120 TCCAGGAACCAAAGAAGAAACATCAACAATTGGAAGTAAAAACACTGCCCTAGTCACCTCAGCAGGCTCAATAACAGCTATACTAGAGGGACAATCAACAGCAACTTC---GAGAACCTCCAATCAGGAAATATCAGCTTCA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 153815 139 + 608964 TCCCAAAAACACACAACAGACATCAACACCTGGAAATGGAAATTTCACACGAGTCACCTCAGCCACCTCAGTAGCACCTACAC---AAGAAAAACCAAAGGGAACTACTTCAAGAACGTCCACTCAAGAGACAGCAGCATTT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2287302 142 - 31377067 TGCTGTCAACACAGGGTCCATGCCACCAGGTGTCACGGGAAGTGTTACTCCAGTCAGCTCAACAGGCTCAATGACAAGTGGACCAGAGGGACACTCAACAGCACATTCCACCCTGACTTCTACTCCGGAGACAACAGTGTCA i canFam3.chr33 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=89364.000000 s hg38.chr3_KI270934v1_alt 3375 19 + 163458 TCTCAGAACCACCAGACTA s gorGor5.CYUI01000254v1 186436 19 + 189199 TCTCAGAACCACCAGACTA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19096924 19 - 19675229 TCTCAGAACCACCAGACTA i macNem1.NW_012014355v1 C 0 I 2309 s cerAty1.NW_012004056v1 16336547 19 - 16847902 TCTCAGAACCACCAGACTA i cerAty1.NW_012004056v1 C 0 I 1092 s chlSab2.chr15 91308452 19 + 91754291 TCTCAGAACCACCAGACTA i chlSab2.chr15 C 0 I 2217 s manLeu1.NW_012102020v1 1358509 19 + 1977891 TCTCAGAACCACCAGACTA i manLeu1.NW_012102020v1 C 0 I 1092 s colAng1.NW_012118932v1 7312558 19 - 7796314 TCTCAGAACCACCAGACTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73787803 19 + 74750902 TCTCAGAACCACCAGACTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17239057 19 - 17725628 TCTCAGAACCACCAGACTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6325490 19 + 6778120 TCTCAGAACCACCAGACTC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 153954 19 + 608964 TCTGAGAGAACTCAGACCC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2287444 19 - 31377067 TCTCAGGGTCACACGACCC i canFam3.chr33 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 78126 128 - 190779 I e panTro5.chr3 2465088 128 - 202621043 I a score=132303.000000 s hg38.chr3_KI270934v1_alt 3394 34 + 163458 AGAGCACGGAGACCACCAGCAAAGCTCAAACCGA s gorGor5.CYUI01000254v1 186455 34 + 189199 AGAGCACGGAGACCACCAGCAAAGCTCAAACTGA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19099252 34 - 19675229 AGAGCACAGAGACCACCAGCGAAGCTCAAACCAG i macNem1.NW_012014355v1 I 2309 C 0 s cerAty1.NW_012004056v1 16337658 34 - 16847902 AGAGCACAGAGACCACCAGCGAAGCTCAAGCCAG i cerAty1.NW_012004056v1 I 1092 C 0 s chlSab2.chr15 91310688 34 + 91754291 AGAGCACAGAGACCACCAGTGAAGCTCAAACCAG i chlSab2.chr15 I 2217 C 0 s manLeu1.NW_012102020v1 1359620 34 + 1977891 AGAGCACAGAGACCACCAGCGAAGCTCAAACCAG i manLeu1.NW_012102020v1 I 1092 C 0 s colAng1.NW_012118932v1 7312577 34 - 7796314 AGAGCCTGGAGACCACCAGACAACCTGAAACCGG i colAng1.NW_012118932v1 C 0 I 2330 s calJac3.chr17 73787822 34 + 74750902 ATGGCACGGAGAGCACCAGAGAAGCTCAAACCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17239076 34 - 17725628 ATGGCATGGAGACCAGCAGAGAAGCTCAAACCAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6325509 34 + 6778120 ATGGCACGGAGACCACCAGGGAAGCTCAAACCAC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 153973 34 + 608964 AGGACTGGAAGACCACCAGAGAGTCTCAAGCAAG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2287463 34 - 31377067 AGACCATGGAGACCAGCACAGAGTCTGCAACCAG i canFam3.chr33 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 78126 128 - 190779 I e panTro5.chr3 2465088 128 - 202621043 I a score=62372.000000 s hg38.chr3_KI270934v1_alt 3428 14 + 163458 CACCCTCACGCAGA s gorGor5.CYUI01000254v1 186489 14 + 189199 CACCCTCACACAGA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19099286 14 - 19675229 CACCCTCACACAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16337692 14 - 16847902 CACTCTCACACAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91310722 14 + 91754291 CACCCTCACACAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1359654 14 + 1977891 CACTCTCACACAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7314941 14 - 7796314 CACCCTCACACAGA i colAng1.NW_012118932v1 I 2330 C 0 s calJac3.chr17 73787856 14 + 74750902 CACCCTCACACAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17239110 14 - 17725628 CACCCTCACACAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6325543 14 + 6778120 CACCCTTACCCAGA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 154007 14 + 608964 CACCCTCACGTGGG i otoGar3.GL873829 C 0 T 369 s canFam3.chr33 2287497 14 - 31377067 CAGTGTCTCAGCGA i canFam3.chr33 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 78126 128 - 190779 I e panTro5.chr3 2465088 128 - 202621043 I a score=152652.000000 s hg38.chr3_KI270934v1_alt 3442 46 + 163458 TGATGACATCAACTCTTTTTTCTTCCCCAAGTGTACACAA---TGTGAT s gorGor5.CYUI01000254v1 186503 46 + 189199 TGATGACATCAACTCTTTTTTCTTCCCCAAGTGTACACAA---TGTGAT i gorGor5.CYUI01000254v1 C 0 I 15 s macNem1.NW_012014355v1 19099300 46 - 19675229 TGATGACATCAACACTTTCCTCTTCCCCAAGTGTACTCAA---TGTGAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16337706 46 - 16847902 TGATGACATCAACTCATTCCTCTTCCCCAAGTGTACTCAA---TGGGAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91310736 46 + 91754291 TGATGACATCAACACTTTCCTCTTCCCCAGGTGTACTCAA---TGTGAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1359668 46 + 1977891 TGATGACATCAACTCTTTCCTCTTCCCCAAGTGTACTCAA---TGGGAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7314955 46 - 7796314 TGACGACATCAACACTTTCCTCTTCCCCAAGTGTACTCAA---CGTGAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73787870 46 + 74750902 GAACTACATCAACTCCTTCCTCTTCCCCAGGTGTACTGAA---TGTGAC i calJac3.chr17 C 0 I 2241 s saiBol1.JH378146 17239124 46 - 17725628 TGTCCACATCACCTCTTTCATCTCCCCCAAGTGTACACAA---TGTGAC i saiBol1.JH378146 C 0 I 1512 s cebCap1.NW_016107444v1 6325557 46 + 6778120 TGTCCACATCACCTCTTTCATCCCCCCCAAGTGTACACAA---TGTGAC i cebCap1.NW_016107444v1 C 0 I 2268 s otoGar3.GL873829 153652 49 + 608964 TGACAACACCACTTACCTCATCCTCTTCAAATGGACAAAGCTCTTTAAT i otoGar3.GL873829 T 369 I 6 s canFam3.chr33 2287511 32 - 31377067 TGATCACATCCTCTCCCTCATCCTCCCAAAGA----------------- i canFam3.chr33 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 78126 128 - 190779 I e panTro5.chr3 2465088 128 - 202621043 I a score=33732.000000 s hg38.chr3_KI270934v1_alt 3488 8 + 163458 GGAGACAG s panTro5.chr3 2465216 8 - 202621043 GAAGACAT i panTro5.chr3 I 128 C 0 s panPan2.chrUn_NW_014024201v1 78254 8 - 190779 GAAGACAT i panPan2.chrUn_NW_014024201v1 I 128 C 0 s gorGor5.CYUI01000254v1 186564 8 + 189199 GGAGACAG i gorGor5.CYUI01000254v1 I 15 C 0 s macNem1.NW_012014355v1 19099346 8 - 19675229 GGAGACGG i macNem1.NW_012014355v1 C 0 I 1967 s cerAty1.NW_012004056v1 16337752 8 - 16847902 GGAGACTG i cerAty1.NW_012004056v1 C 0 I 15 s chlSab2.chr15 91310782 8 + 91754291 GGAGACGG i chlSab2.chr15 C 0 I 1146 s manLeu1.NW_012102020v1 1359714 8 + 1977891 GGAGACTG i manLeu1.NW_012102020v1 C 0 I 2274 s colAng1.NW_012118932v1 7315001 8 - 7796314 GGAGACGG i colAng1.NW_012118932v1 C 0 I 1149 s calJac3.chr17 73790157 8 + 74750902 GGAGACAT i calJac3.chr17 I 2241 C 0 s saiBol1.JH378146 17240682 8 - 17725628 GGAGACAT i saiBol1.JH378146 I 1512 C 0 s cebCap1.NW_016107444v1 6327871 8 + 6778120 GGACACAT i cebCap1.NW_016107444v1 I 2268 C 0 s otoGar3.GL873829 153707 8 + 608964 AATGACAA i otoGar3.GL873829 I 6 C 0 s canFam3.chr33 2287543 7 - 31377067 GGAGACA- i canFam3.chr33 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=63375.000000 s hg38.chr3_KI270934v1_alt 3496 11 + 163458 CTCCTCCAGAT s panTro5.chr3 2465224 11 - 202621043 CTCCTTCAGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78262 11 - 190779 CTCCTTCAGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 186572 11 + 189199 CTCCTCCAGAT i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19101321 11 - 19675229 CTCCTGCAGAT i macNem1.NW_012014355v1 I 1967 C 0 s cerAty1.NW_012004056v1 16337775 11 - 16847902 CTCCTGCAGAT i cerAty1.NW_012004056v1 I 15 C 0 s chlSab2.chr15 91311936 11 + 91754291 CTCCTGCAGAT i chlSab2.chr15 I 1146 C 0 s manLeu1.NW_012102020v1 1361996 11 + 1977891 CTCCTGCAGAT i manLeu1.NW_012102020v1 I 2274 C 0 s colAng1.NW_012118932v1 7316158 11 - 7796314 CTCCTCCAGAT i colAng1.NW_012118932v1 I 1149 C 0 s calJac3.chr17 73790165 11 + 74750902 CCCCTCCAGAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17240690 11 - 17725628 CCCCTCCGGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6327879 11 + 6778120 CTCCTCCAGGT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 153715 11 + 608964 TGACTTCAAAT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2287550 11 - 31377067 CTCCTACAGAT i canFam3.chr33 C 0 I 537 e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=658558.000000 s hg38.chr3_KI270934v1_alt 3507 120 + 163458 GAAATGACCACATCATTTCCC------------------------TCCAGTGTCACCAACACACTCATGATGACATCAAAGACTATAACAATGACAACCTCCACAGACTCCACTCTTGGAAACACAGAAGAGACATCAACAGCA s panTro5.chr3 2465235 120 - 202621043 GAAACAGCTACCTCATCCCTC------------------------TCTAGTGTCACAAACACATCCATGATGACATCAGAGAAGATAACAGTGACAACCTCCACAGGCTCCACTCTTGGAAACCCAGGGGAGACATCAGTACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78273 120 - 190779 GAAACAGCTACCTCATCCCTC------------------------TCTAGTGTCACAAACACATCCATGATGACATCAGAGAAGATAACAGTGACAACCTCCACAGGCTCCACTCTTGGAAACCCAGGGGAGACATCAGTACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 186583 120 + 189199 GAAATGACCACATCATTTCCC------------------------TCCAGTGTCACCAACACACTCATGATGACATCAAAGACTATAACAATGACAACCTCCATAGACTCCACTCTTGGAAACACAGAAGAGACATCAACAGCA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19101332 120 - 19675229 GAAATGACCACATCATTTCCC------------------------TCCAGTGTCACCAACACGCTCATGATGACATCAAAGACTATAGCAATGACAACCTCCACAGACTCCACTCTTGGAAACATAGAAGAGACATCAACACCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16337786 120 - 16847902 GAAATGACCACATCATTTCCC------------------------TCCAGTGTCACCAACACGCTCATGATGACATCAGAGACTATAGCAATGACAACCTCCACAGACTCCACTCTTGGAAACATAGAAGAGACATCAACACCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91311947 120 + 91754291 GAAATGACCACATCATTTCCC------------------------TCCAGTGTCACCAACACGCTCATGATGACATCAAAGACTATAGCAATGACAACCTCCACAGACTCCACTCTTGGAAACATAGAAGAGACATCAACACCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1362007 120 + 1977891 GAAATGACCACATCATTTCCC------------------------TCCAGTGTCACCAACACGCTCATGATGACATCAGAGACTATAGCAATGACAACCTCCACAGACTCCACTCTTGGAAACACAGAAGAGACATCAACACCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7316169 120 - 7796314 GAAATGTCCACATCATTTCCC------------------------TCTAGTGTCACCAACACGCTCATGATGACATCAAAGACTATAACAATGACAACCTCCACAGACTCCACTCTTGGAAACACAGAAGAGACATCAACACCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73790176 120 + 74750902 GAAATGACCACCTCATCCCCA------------------------TACGGTGTCACCAACACACCCATGATGACATCAAAGACTATAACAATGACAACATCTACTGAATCCACTCTTGGAAACCCAGAGGAGACATCAACACCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17240701 120 - 17725628 GAAGTGACCACCTCATTCCCC------------------------TCTAGTGTCAGCAACACACTCATAATGAAATCAAAGACTGTCACAGTGACAACCCTTACAGAGTCCACTTGTAATATCACTGAGGAGACATCGGCCCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6327890 120 + 6778120 GAAATAGCTACCTCATCCCTC------------------------TCTAGTGTCACGAACACACCCGTGATGATATCAAAGACTATAACAATGACAACCTTCACAAACTCCACTCTTGGAAACACAACAGAGACATCAACACCA i cebCap1.NW_016107444v1 C 0 I 375 s otoGar3.GL873829 153726 120 + 608964 GAAACAACTACCTCACCACCT------------------------GCCAATGTCGAAAACACGTCCCCGATGACATCACAAGTACCCAGGTCAGAAAGATCCACAGACTCCAGTCCCAAAAACACACAACAGACATCAACACCT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2288098 144 - 31377067 GAAATGGCCACACCATCAGCCTCCCCTGGTGACACTTCAAGATCTTCCAGTGGAAGCAACACATCAGCAACGACATCACAGGTCCCGACGACATCGATTGCAACAGACACCCCAGCAGGAACCACGGGACACACGTCACCACCT i canFam3.chr33 I 537 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=591544.000000 s hg38.chr3_KI270934v1_alt 3627 111 + 163458 GGAACTGAAAGTTCTACCCCAGTGACCTCAGCAGTCTCAATAACAGCTGGACAGGAAGGACAATCACGAACAACTTCCTGGAGGACCTCTATCCAAGACACATCAGCTTCT s panTro5.chr3 2465355 111 - 202621043 GTTACTGGAAGTCTTATGCCAGTCACCTCAGCAGCCTTAGTAACAGTTGATGCAGAAGGACAATCACCAGCAACTTTCTCAAGGGCTTCTACTCAGGACACAACAGCTTTT i panTro5.chr3 C 0 T 378 s panPan2.chrUn_NW_014024201v1 78393 111 - 190779 GTTACTGGAAGTCTTATGCCAGTCACCTCAGCAGCCTTAGTAACAGTTGATGCAGAAGGACAATCACCAGCAACTTTCTCAAGGGCTTCTACTCAGGACACAACAGCTTTT i panPan2.chrUn_NW_014024201v1 C 0 T 378 s gorGor5.CYUI01000254v1 186703 111 + 189199 GGAACTGAAAGTTCTACCCCAGTGACCTCAGCAGTCTCAATAACAGCTGGACAGGAAGGACAATCACGAACAACTTTCTGGAGGAACTCTGCCCAAGACACATCAGCTTCT i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19101452 111 - 19675229 GGAACTGAAAGTTCTACCCCAGTGATCTCAACAGTCTCAATAACAGCTGAACTGGAAGGACAATCACAAACAACGTCCTCAAGAACTTCTATCCAGGACACATCAGCTTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16337906 111 - 16847902 GGAACTGAAAGTTCTACCCCAGCGATCTCAGCAGTCTCAATAACAGCTGAACTGGAAGGACAATCACGAACAACGTCCTCAAGAACTTCTATCCAGGACACATCAGCTTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91312067 111 + 91754291 GGAACTGAAAGTTCTACCCCAGTGATCTCAGCAGTCTCAATAACAGCTGAACTGGAAGGACAATCACACACAACGTCCTCAAGGACTTCTATCCAGGACACATCAGCTTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1362127 111 + 1977891 GGAACTGAAAGTTCTACCCCAGCGATCTCAGCAGTCTCAATAACAGCTGAACTGGAAGGACAATCACGAACAACGTCCTCAAGAACTTCTATCCAGGACACATCAGCTTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7316289 111 - 7796314 GGAACTGAAAGTTCTACCCCAGTGACCTCAGCAGTCTCAATAACAGCTGAACTGGAAGGACAATCACAAACAACGTCCTCAAGAACTTCTATCCAGGACACATCAGCTTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73790296 111 + 74750902 GGAACTAAAAGTTCTACCTCAGTGAGCTTAGCAGTGTCAATAACAGCTGAACCAGAAGGACACTCACAAACAACTTCTTCGAGGACCTCTATCCAGGACACATCAGCTTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17240821 111 - 17725628 GGAACTAGAAGTCCTACCCCAGTCCCTTCAGCAGCCTCCATAACGGCTGAGCCAGAAGGACAATCAGCAGCGGCTTCCTCGAGGACCTCTATCTGGGACACGTCAGCTTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6328385 111 + 6778120 GGAACTAAAAGGCCTACCACAGTCACCTCAGCAGCCTCGTTAACAGCTGAGCCAGAAGGACAATCCACAGCAGCTTCATCAAGGACCTCTACCTCGGACACAGCAGATTCT i cebCap1.NW_016107444v1 I 375 C 0 s otoGar3.GL873829 153846 108 + 608964 GGAAATGGAAATTTCACACGAGTCACCTCAGCCACCTCAGTAGCACCTACAC---AAGAAAAACCAAAGGGAACTACTTCAAGAACGTCCACTCAAGAGACAGCAGCATTT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2288242 111 - 31377067 GAAACGGGAAGTGTTACACCAGTCAGCTCAACAGACTCAATGACAGGTGGACCAGGGGGACACTCACCAGCACACTCTTCCCTGACTTCTACTCCAGAGACAACATCGTCA i canFam3.chr33 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=1035781.000000 s hg38.chr3_KI270934v1_alt 3738 180 + 163458 TCTCAGAACCACTGGACTCGGAGCACGCAGACCACCAGGGAATCTCAAACCAGCACCCTAACACACAGAACCACTTCAACTCCTTCTTTCtctccaagtgtacacaatgtgacagggactgtttctcaGAAGACATCTCCTTCAGGTGAAACAGCTACCTCATCCCTCTGTAGTGTCACA s panTro5.chr3 2465088 180 - 202621043 TCTCAGAAGCACTGGACTCGGAGCACGCAGACCACCAGGGAATCTCAAACCAGCACCCTAACACACAGAACCACTTCAACTCCTTCCTTCtctccaagtgtacacaatgtgacagggactgtttctcaGAAGACATCTCCTTCAGGTGAAACAGCTACCTCATCCCTCTCTAGTGTCACA i panTro5.chr3 T 378 C 0 s panPan2.chrUn_NW_014024201v1 78126 180 - 190779 TCTCAGAAGCACTGGACTCGGAGCGCGCAGACCACCAGGGAATCTCAAACCAGCACCCTAACACACAGAACCACTTCAACTCCTTCCTTCtctccaagtgtacacaatgtgacagggactgtttctcaGAAGACATCTCCTTCAGGTGAAACAGCTACCTCATCCCTCTCTAGTGTCACA i panPan2.chrUn_NW_014024201v1 T 378 C 0 s gorGor5.CYUI01000254v1 186814 180 + 189199 TCTCAGAACCACTGGACTCGGAGCACGCAGACCACCAGGGAATCTCAAACCAGCACCCTAACACACAGAACCACTTCAACTCCTTCCTTCtctccaagtgtacacaatgtgacagggactgtttctcaGAAGACATCTCCTTCAGGTGAAACAGCTACCTCATCCCCCTCTAGTGTCACA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19101563 180 - 19675229 TCGCAGAACCACCAGACTCAGAGCACTGAGACCACCAAAGAATCTCAAACCAGCACTCTTACACAGAGAACCACATCAATTCCTTCCGTCTCCCCAAGTGTACACAATGTGAAAGGGACTATTTCTCAGAAGACATTTCCTCCAGGTGAAACAACTACCTCATCCCTCTTTAGTGTCACA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16338017 180 - 16847902 TCGCAGAACCACCAGACTCAGAGCATAGACACCACCAGAGAGTCTCAAACCAGCACTCTTACACAGAGAACCACATCAATTCCTTCCTTCTCCCCAAGTGTACACAATGTGAAAGGGACTATTTCTCAGAAGACATTTCCTCCAGGTGAAACAACTACCTCATCCCTCTTTAGTGTCACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91312178 180 + 91754291 TCGCAGAACCACCAGACACAGAGCACAGACACCACCAGAGAGTCTCAAACCAGCACTCTTACACAGAGAACCACATCAATTCCTTCCTTCTCCCCAAGTGTACACAATGTGAAAGGGACTATTTCTCAGAAGACATTTCCTCCAGGTGAAACAACTACCTCATCCCTCTTTAGTGTCACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1362238 180 + 1977891 TCGCAGAACCACCAGACTCAGAGCACTGAGACCACCAAAGAATCTCAAACCAGCACTCTTACACAGAGAACCACATCAATTCCTTCCTTCTCCCCAAGTGTACACAATGTGAAAGGGACTATTTCTCAGAAGACATTTCCTCCAGGTGAAACAACTACCTCATCCCTCGTTAGTGTCACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7316400 180 - 7796314 TcacagaaccaccagacacagagcacagacacCACCAGAGAGTCTCAAACCAGCACCCTCACACAGATGTCCACATTACCTCTTCCATCCTCCCCAAGTGTACACAATATGACAGCAATTGTTTCTCAGGACACATCTCCTCCGGGTGAAACAACTGCCTCATTCCTCTCCAGTGTCACG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73790407 180 + 74750902 TCTCAGAACCACCAGATTCAGAGCACAGAGACCACTAGAGAGTCTCAAACCAGCACCTTCACACAGATGTCCACATCAACTCTTTCATCCTCCCCAAGTGTACACAATGTGGCCACAACAGTTTCTCAGGACACATTTCCTCCAGATGAAACAACTGCCTCATTCCTCTCTAGTGTCACG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17240932 180 - 17725628 TCTCAGAACTACCAGACTCAGAGCACAGAGACCACCAGGGAATCTCAAACTAGCATCCTCACACAGATGATCACATCAGCTCCTTCCTTCTCCCCAAGTGCACACAATGTGACAGGGACTGTTTCTCAGGACACATCTCCTCCAGGTGAAACAGCTACCTCATCCCTCTCTAGTGTCACC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6328496 180 + 6778120 TCTCAGAACCACCAGACTCAGAGCACGGAGACCACCAGAGAAGCTCAAATCAGCACCCTCCCACAGATGTCCACATCAGCTCTTTCATCCTCCCCAAGTGCACACAATGTGACCACAACAGTTTCTCAGGACACATCTCCTCCAGGTGAAACAACTGCCTCATTCCTTTCTAGTGTCACA i cebCap1.NW_016107444v1 C 0 T 753 s otoGar3.GL873829 153954 180 + 608964 TCTGAGAGAACTCAGACCCAGGACTGGAAGACCACCAGAGAGTCTCAAGCAAGCACCCTCACGTGGGCGAGCGCTTCAACTCCTCCATCTACCCAAAGTGGACACCATCCTACTAAAACGGTTTCTCAGGAAACGTCCCATACAGGTGAAACAACCACCTCCCCTACGTCTGGTGCCACC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2288353 180 - 31377067 TCTCAGGGTCACATGACCCAGACCATAGAGACCAGCACAGAGTCTGCAACCAGCAGTGTCTCAGCGATGATCACATCCACTCCCTCATCCTCCCGAAGTGAACACACACCTACAGATGACTCGACCCAGGACATGGCCTTGTCTGACACACCAGGTACTTCATCCCTTTCCAGTGTCAGC i canFam3.chr33 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=384907.000000 s hg38.chr3_KI270934v1_alt 3918 76 + 163458 AACACATCCATGATGACATCAGAGAAGATAACAGTGACAACCTCCA------------------------------------------------------------------------------CAGGCTCCACTCTTGGAAACCCAGGGGAGA s panTro5.chr3 2465268 76 - 202621043 AACACATCCATGATGACATCAGAGAAGATAACAGTGACAACCTCCA------------------------------------------------------------------------------CAGGCTCCACTCTTGGAAACCCAGGGGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78306 76 - 190779 AACACATCCATGATGACATCAGAGAAGATAACAGTGACAACCTCCA------------------------------------------------------------------------------CAGGCTCCACTCTTGGAAACCCAGGGGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 186994 76 + 189199 AACACATCCATGATTACATCAGAGAAGATAACAGTGACAACCTCCA------------------------------------------------------------------------------CAGGCTCCACTCTTGGAAACCCAGGGGAGA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19101743 76 - 19675229 AACACACCCATGATGACATCAAAGAAGATAACAACGACAACCTCCA------------------------------------------------------------------------------CAGACTCCACTCTTGGAAACACAGGGGAGA i macNem1.NW_012014355v1 C 0 I 3 s cerAty1.NW_012004056v1 16338197 76 - 16847902 AACACACCCATGATGACATCAAAGAAGATAACGACGACAACCTCCA------------------------------------------------------------------------------CAGACTCCACTCTTGGAAACACAGGGGAGA i cerAty1.NW_012004056v1 C 0 I 3 s chlSab2.chr15 91312358 76 + 91754291 AACACACCCATGATGATATCAAAGAAGATAACAACGACAACCTCCA------------------------------------------------------------------------------CAGACTCCACTCTTGGAAACACAGGGGAGA i chlSab2.chr15 C 0 I 3 s manLeu1.NW_012102020v1 1362418 76 + 1977891 AACACACCCATGATGACATCAAAGAAGATAACAACGACAACCTCCA------------------------------------------------------------------------------CAGACTCCACTCTTGGAAACACAGGGGAGA i manLeu1.NW_012102020v1 C 0 I 3 s colAng1.NW_012118932v1 7316580 76 - 7796314 GACACATCCATGATGACATCAAAGATGATAACAGTGACAACCTCCA------------------------------------------------------------------------------CAGACTCCACTCTTGGAAACACAGTGGAGA i colAng1.NW_012118932v1 C 0 I 1520 s calJac3.chr17 73790587 76 + 74750902 GACGCATCCACGGTGACATCAAAGGTTATAACAATGGCAGCCTCCA------------------------------------------------------------------------------CAGACACCACTCTTGGAAGCACAGCAGAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17241112 76 - 17725628 AACATACCCATGATGATATCAAAGACTATAACAATGACAACCTTCA------------------------------------------------------------------------------CAAACTCCACTCTTGGAAACACAGCAGAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6327923 76 + 6778120 AACACACCCGTGATGATATCAAAGACTATAACAATGACAACCTTCA------------------------------------------------------------------------------CAAACTCCACTCTTGGAAACACAACAGAGA i cebCap1.NW_016107444v1 T 753 C 0 s otoGar3.GL873829 154134 76 + 608964 CACACACCACTGATGACATCTGACATACCTAGCACACAAACCTACA------------------------------------------------------------------------------CAGACTCCACTACGCAGAATACACAGCACA i otoGar3.GL873829 C 0 I 101 s canFam3.chr33 2288533 152 - 31377067 CACACACCTTCCGCAGTGACAGAAATACCCACACCATCAGCCTCCCCTGGGGACACTTCAAGATCTTCCAGTGGAAGCAACACATCACCAATGACATCACAGGTCCCGACGACACTGATTGCATCAGACACCCCAGCAGGAACCACGGGACA-- i canFam3.chr33 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=3332.000000 s hg38.chr3_KI270934v1_alt 3994 3 + 163458 CAT s panTro5.chr3 2465344 3 - 202621043 CAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78382 3 - 190779 CAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 187070 3 + 189199 CAT i gorGor5.CYUI01000254v1 C 0 C 0 s calJac3.chr17 73790663 3 + 74750902 TAT i calJac3.chr17 C 0 I 3 s saiBol1.JH378146 17241188 3 - 17725628 CAT i saiBol1.JH378146 C 0 I 3 s cebCap1.NW_016107444v1 6327999 3 + 6778120 CAT i cebCap1.NW_016107444v1 C 0 I 3 s canFam3.chr33 2288685 2 - 31377067 CA- i canFam3.chr33 C 0 C 0 e macNem1.NW_012014355v1 19101819 3 - 19675229 I e otoGar3.GL873829 154210 101 + 608964 I e colAng1.NW_012118932v1 7316656 1520 - 7796314 I e manLeu1.NW_012102020v1 1362494 3 + 1977891 I e chlSab2.chr15 91312434 3 + 91754291 I e cerAty1.NW_012004056v1 16338273 3 - 16847902 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=13434.000000 s hg38.chr3_KI270934v1_alt 3997 2 + 163458 CA s panTro5.chr3 2465347 2 - 202621043 CA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78385 2 - 190779 CA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 187073 2 + 189199 CA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19101822 2 - 19675229 CA i macNem1.NW_012014355v1 I 3 C 0 s cerAty1.NW_012004056v1 16338276 2 - 16847902 CA i cerAty1.NW_012004056v1 I 3 C 0 s chlSab2.chr15 91312437 2 + 91754291 CA i chlSab2.chr15 I 3 C 0 s manLeu1.NW_012102020v1 1362497 2 + 1977891 CA i manLeu1.NW_012102020v1 I 3 C 0 s colAng1.NW_012118932v1 7318176 2 - 7796314 CA i colAng1.NW_012118932v1 I 1520 C 0 s calJac3.chr17 73790669 2 + 74750902 CA i calJac3.chr17 I 3 I 372 s saiBol1.JH378146 17241194 2 - 17725628 CA i saiBol1.JH378146 I 3 I 1497 s cebCap1.NW_016107444v1 6328005 2 + 6778120 CA i cebCap1.NW_016107444v1 I 3 I 2238 s canFam3.chr33 2288687 2 - 31377067 CG i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 154210 101 + 608964 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=418.000000 s hg38.chr3_KI270934v1_alt 3999 3 + 163458 TCA s otoGar3.GL873829 154311 3 + 608964 TCT i otoGar3.GL873829 I 101 C 0 s canFam3.chr33 2288689 3 - 31377067 TCA i canFam3.chr33 C 0 C 0 e macNem1.NW_012014355v1 19101824 0 - 19675229 C e saiBol1.JH378146 17241196 1497 - 17725628 I e calJac3.chr17 73790671 372 + 74750902 I e cebCap1.NW_016107444v1 6328007 2238 + 6778120 I e colAng1.NW_012118932v1 7318178 0 - 7796314 C e manLeu1.NW_012102020v1 1362499 0 + 1977891 C e chlSab2.chr15 91312439 0 + 91754291 C e cerAty1.NW_012004056v1 16338278 0 - 16847902 C e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C e gorGor5.CYUI01000254v1 187075 0 + 189199 C e panPan2.chrUn_NW_014024201v1 78387 0 - 190779 C e panTro5.chr3 2465349 0 - 202621043 C a score=703078.000000 s hg38.chr3_KI270934v1_alt 4002 120 + 163458 GTACCTGTTACTGGAAGTCTTATGCCAGTCACCTCAGCAGCCTTAGTAACATTTGATCCAGAAGGACAATCACCAGCAACTTTCTCAAGGACTTCTACTCAGGACACAACAGCTTTTTCT s panTro5.chr3 2465349 120 - 202621043 GTACCTGTTACTGGAAGTCTTATGCCAGTCACCTCAGCAGCCTTAGTAACAGTTGATGCAGAAGGACAATCACCAGCAACTTTCTCAAGGGCTTCTACTCAGGACACAACAGCTTTTTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78387 120 - 190779 GTACCTGTTACTGGAAGTCTTATGCCAGTCACCTCAGCAGCCTTAGTAACAGTTGATGCAGAAGGACAATCACCAGCAACTTTCTCAAGGGCTTCTACTCAGGACACAACAGCTTTTTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 187075 120 + 189199 GTACCTGTTACTGGAAGTCTTATGCCAGTCACCTCAGCATCCTTAGTAACAGTTGATCCAGAAGGACAATCACCAGCAACTTTCTCAAGGACTTCTACTCAGGACACAACAGCTTTTTCT i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19101824 120 - 19675229 GTACCTGTTACAAGAAGTCTTATGCCAGTCACTTCAGCAGCCTCAATAACAGCTGAGCCAGAAGGACAATTACCAGCAACTTCCTCAAGGACTTCTACTCAGGACACTACAGGTTTTTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16338278 120 - 16847902 GTACCTGTTACAAGAAGTCTTATGCCAGTCACTTCAGCAGCCTCAATAACAGCTGAGCCAGAAGGACAATTACCAGCAACTTCCTCAAGGACTTCTACTCAGGACACAACAGGTTTTTCT i cerAty1.NW_012004056v1 C 0 I 378 s chlSab2.chr15 91312439 120 + 91754291 GTACCTGTTACAAGAAGTCTCATGCCAGTCACTTCAGCAGCCCCAATAACAGCTGAGCCAGAAGGACAATTACCAGCAACTTCCTCAAGGACTTCTACTCAGGACACAACAGGTTTTTCT i chlSab2.chr15 C 0 I 4894 s manLeu1.NW_012102020v1 1362499 120 + 1977891 GTACCTGTTACAAGAAGTCTTATGCCAGTCACTTCAGCAGCCTCAATAACAGCTGAGCCAGAAGGACAATTACCAGCAACATCCTCAAGGACTTCTACTCAGGACACAACAGGTTTTTCT i manLeu1.NW_012102020v1 C 0 I 378 s colAng1.NW_012118932v1 7318178 120 - 7796314 GTACCTGTTACAAGAAGTCTTATGCTAGTCACTTCAGCAGCCTCAATAACAGCTGAGCCAGAAGGACAATTACCAGCAACTTCCTCAAGGACTTCTACTCAGGACACAACAGGTTTTTCT i colAng1.NW_012118932v1 C 0 I 370 s calJac3.chr17 73791043 117 + 74750902 GTACCTGTTACAGGAAGTCTTATGCCAGTCACCTCAGTAGCCTCAATAACAGTCGAACCAGAAGGAGAATCCTCTGCAACTTTCTCAAGGACTT---CTCAGTACACAACAGCTTTTCCT i calJac3.chr17 I 372 C 0 s saiBol1.JH378146 17242693 120 - 17725628 GCACCCGTTACAGGAAGTCTCATGCCAGTCACCTCAGTAGCCTCAATGACAGCTGAACCAGAAGGAGAATCACCTGCAACTTTCTCAGGGACTTCTACTCAGCACACGGCAGCTTTTCCT i saiBol1.JH378146 I 1497 C 0 s cebCap1.NW_016107444v1 6330245 120 + 6778120 GTACCCGTTACAGGAAGTCTTATGCCCGTCACCTCAGTAGCCTCAATACCAGTTGAACCAGAAGGAGAATCGCCTGCAACTTCCTCAAGGACTTCTACCCAGGACACAACAGCTTTTCCT i cebCap1.NW_016107444v1 I 2238 C 0 s otoGar3.GL873829 154314 120 + 608964 GTGACTACCGCCAGCTGCTCTCCTCCCGCTGTCTCTGGAGTCCCACACACAGGGAGATCAACAGGACAGTCAACCGCAACTGCTCCCAGCACCATTCCTCAGGAAACATCAGCCACTGCA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2288692 120 - 31377067 CCACCTGAAACAGGAAGTGTTACACCAGTCAGCTCAACAGACTCAATGACAAGTGGACCAGGGGGACACTCAACAGCACACTCTTCCCTGACTTCTACTCCAGAGACAACAGCGTCATCT i canFam3.chr33 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=55305.000000 s hg38.chr3_KI270934v1_alt 4122 10 + 163458 AAGAACCACC s panTro5.chr3 2465469 10 - 202621043 AAGAACCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78507 10 - 190779 AAGAACCACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 187195 10 + 189199 AAGAACCACC i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19101944 10 - 19675229 CAGAACCACC i macNem1.NW_012014355v1 C 0 I 378 s cerAty1.NW_012004056v1 16338776 10 - 16847902 CAGAACCACC i cerAty1.NW_012004056v1 I 378 C 0 s chlSab2.chr15 91317453 10 + 91754291 CAGAACCACC i chlSab2.chr15 I 4894 C 0 s manLeu1.NW_012102020v1 1362997 10 + 1977891 CAGAACCACC i manLeu1.NW_012102020v1 I 378 C 0 s colAng1.NW_012118932v1 7318668 10 - 7796314 CAGAACCACC i colAng1.NW_012118932v1 I 370 C 0 s calJac3.chr17 73791160 10 + 74750902 CAGAACCAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17242813 10 - 17725628 CAGAACCAGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6330365 10 + 6778120 CAGAACCAGC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 154434 10 + 608964 CAGATGTCCC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2288812 10 - 31377067 CAGGGTCACT i canFam3.chr33 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=559945.000000 s hg38.chr3_KI270934v1_alt 4132 102 + 163458 AGACTCAGAGCGTGGAGACCACCAGAGTATCTCAAATCAACACCC---------------TCAACACCCTCACACCGGTTAC-AACATCAACTGTTTTATCCTCACCAAGTGGATTCA s panTro5.chr3 2465479 102 - 202621043 AGACTCAGAGCATGGAGACCACCAGAGTATCTCAAATCAACACCC---------------TCAACACCCTCACACCAGTTAC-AACATCAACTGTTTTATCCTCACCAAGTGGATTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78517 102 - 190779 AGACTCAGAGCATGGAGACCACCAGAGTATCTCAAATCAACACCC---------------TCAACACCCTCACACCAGTTAC-AACATCAACTGTTTTATCCTCACCAAGTGGATTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 187205 103 + 189199 AGACTCAGAGCATGGAGACCACCAGAGTATCTCAAATCAACACCC---------------TCAACACCCTCACACCGGTTACAAACATCAACTGTTTTATCCTCACCAAGTGGATTCA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19102332 93 - 19675229 AGACTCAGAGCATAGAGACCACCAGAGTATCTCAAA------------------------TCAACACCCTCACACCGGTTAC-AACATCAACTGTTTTATCCTCACCAAGTGGATTCA i macNem1.NW_012014355v1 I 378 C 0 s cerAty1.NW_012004056v1 16338786 93 - 16847902 AGACTCAGAGCATAGAGACCACCAGAGTATCTCAAA------------------------TCAACACCCTCACACCGGTTAC-AACATCAACTGTTTTATCCTCACCAAGTGGATTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91317463 93 + 91754291 AGACTCAGAGCATAGAGACCACCAGAGTATCTCAAA------------------------TCAACACCCTCACACCGGTTAC-AACATCAACTGTTTTATCCTCACCAAGTGGATTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1363007 93 + 1977891 AGACTCAGAGCATAGAGACCACCAGAGTATCTCAAA------------------------TCAACACCCTCACACCGGTTAC-ATCATCAGCTGTTTTATCCTCACCAAGTGGATTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7318678 93 - 7796314 AGACTCAGAGCATAGAGACCACCAGAGTATCTCAAA------------------------TCAACACCCTCACACCAGTTAC-AACATCAACTGTTTTATCCTCACCAAGTGGATTCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73791170 90 + 74750902 AGACTCAGAGCGTGGGGACCACCAGAGGACCTCAGA------------------------TCAACACCCTCACACTGGTTGC----ATCAACTGTTTTATCCTCACCAAGTGGACTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17242823 90 - 17725628 AGACTCACGGCATGGGGACCACCGGAGTATCTCAAA------------------------TCAACACCCTCACGCTGGTTGC----ATCGACTGTTTTATCCTCGCCAAGTGGACTCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6330375 90 + 6778120 GGACTCAGAGCATGGGGACCACCAGAGTACCTCAGA------------------------TCAACACCCTCACACTGGTTGC----ATCAACTGTTTTATCCTCACCAAGTGGACTCA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 154444 117 + 608964 ACACTCAGACCACAGGAACCACCGGAGCATCTGAAACCATGAGCTTGGTGTCCCGGGTGACTGACACCTTCCCAACAGTCAC-ATCCCCACATCCTTCATCCACACCAAATGGGCACA i otoGar3.GL873829 C 0 T 1515 s canFam3.chr33 2288822 93 - 31377067 CCACCCAGACCATGGAGACCAGCACAGAGTCTGCAA------------------------CCAGCAGTGTCTCAGCGATGAT-CACATCCTCTCCCTCATCCTCCCGAAGTGAACACA i canFam3.chr33 C 0 I 1 e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=1694147.000000 s hg38.chr3_KI270934v1_alt 4234 308 + 163458 ACC--CAAGTGGAACAGTTTCTCAGGAGACATTCCCTTCTGGTGAAACAACCACCTCATCCCCTTCCAGTGTCAGCAATACA----------------------------------------------------------TTCCTGGT--------------------AACATCAAAGGTGTTCAGAA---TGCCAACCTCCAGAGACTCTACTCTTGGAAACACAGAGGAGACATCACTATCTGTAAGTGGAACCATTTCTGCAATCACTTCCAAAGTTTCAACCATATGGTGGTCAGACACTCTGTCAACAGCACTCTCCCCCAGTTCTCTACCTC---------CAAAAATATCCACAGCTTTCCACACCCAGCAGAGTGAA---GGTGCAGAGACCACA---- s panTro5.chr3 2465581 308 - 202621043 ACC--CAAGTGGAACAGTTTCTCAGGAGACATTCCCTTCTGGTGAAACAACCACCTCATCCCCTTCCAGTGTCAGCAATACA----------------------------------------------------------TTCCTGGT--------------------AACATCAAAGGTGTTCAGAA---TGCCAACCTCCAGAGACTCTACTCTTGGAAACACAGAGGAGACATCACTATCTGTAAGTGGAACCATTTCTGCAATCACTTCCAAAGTTTTAACCATATGGTGGTCAGACACTCTGTCAACAGCACTCTCCCCCAGTTCTCTACCTC---------CAAAAATATCCACAGCTTTCCACACCCAGCAGAGTGAA---GGTGCAGAGACCACA---- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78619 308 - 190779 ACC--CAAGTGGAACAGTTTCTCAGGAGACATTCCCTTCTGGTGAAACAACCACCTCATCCCCTTCCAGTGTCAGCAATACA----------------------------------------------------------TTCCTGGT--------------------AACATCAAAGGTGTTCAGAA---TGCCAACCTCCAGAGACTCTACTCTTGGAAACACAGAGGAGACATCACTATCTGTAAGTGGAACCATTTCTGCAATCACTTCCAAAGTTTCAACCATATGGTGGTCAGACACTCTGTCAACAGCACTCTCCCCCAGTTCTCTACCTC---------CAAAAATATCCACAGCTTTCCACACCCAGCAGAGTGAA---GGTGCAGAGACCACA---- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 187308 307 + 189199 ACC--CAAGTGGAACAGTTTCTCAGGAGACATTCCCTTCTGGTGAAACAACCACCTCATCCCCTTCCAGTGTCAGCAATACA----------------------------------------------------------TTCCTGG---------------------AACATCAAAGGTGTTCAGAA---TGCCAACCTCCAGAGACTCTACTCTTGGAAACACAGAGGAGACATCACCAGCTGTAAGTGGAACCATTTCTGCAATCACTTCCAAAGTTTCAACCATATGGCGGTCAGACACTCTGTCAACAGCACTCTCCCCCAGTTCTCTACCTC---------CAAAAATATCCACAGCTTTCCACACCCAGCAGAGTGAA---GGTGCAGAGACCACA---- i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19102425 308 - 19675229 ACC--CAAGTGGAACAGTTTCTCAGGAGACATTCCCTTCTGGTGAAACAACCACTTCATCCCCTTCCAGTGTCAGCAACGCA----------------------------------------------------------TTCCTGGT--------------------GACATCAGAGGTGTTCAGAA---TGCCCACCTCCAGAGACTCTACTCTTGGAAACACAGAGGAAATATCACTACCTGTAAGGGGAACCATTTCTGCAATTACTTCTAGAGTTTCAACCATATGGTTGTCAGACACACTGTCAACAGCACTCTCCCCCAGTTCTTTACCTC---------CAAAAATATCCACAGCTTTCCACACCCAGCAGAGTGAA---GGTGCAGAGACCATA---- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16338879 308 - 16847902 ACC--CAAGTGGAACAGTTTCTCAGGAGACATTCCCTTCTGGTGAAACAACCACTTCATCCCCTTCCAGTGTCAGCAACACA----------------------------------------------------------TTCCTGGT--------------------GACATCAGAGGTGTTCAGAA---TGCCCACCTCCAGAGACTCTACTCTTGGAAACACAGAGGAAATATCACTACCTGTAAGGGGAACCATTTCTGCAATTACTTCTAGAGTTTCAACCATATGGTTGTCAGACACACTGTCAACAGCACTCTCCCCCAGTTCTTTACCTC---------CAAAAATATCCACAGCTTTCCACACCCAGCAGAGTGAA---GGAGCAGAGACCATA---- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91317556 308 + 91754291 ACC--CAAGTGGAACAGTTTCTCAGGAGACATTCCCTTCTGGTGAAACAACCACTTCATCCCCTTCCAGTGTCAGCAACACA----------------------------------------------------------TTCCTGGT--------------------GACATCAGAGGTGTTCAGAA---TGCCCACCTCCAGAGACTCTACTCTTGGAAACACAGAGGAAATATCACTACCTATAAGGGGAACCATTTCTGCAATTACTTCTAGAGTTTCAACCATATGGTTGTCAGACACACTGTCAACAGCACTCTCCCCCAGTTCTTTACCTC---------CAAAAATATCCACAACTTTCCACACCCAGCAGAGCGAA---GGTGCAGAGACCATA---- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1363100 308 + 1977891 ACC--CAAGTGGAACAGTTTCTCAGGAGACATTCCCTTCTGGTGAAACAACCACTTCATCCCCTTCCAGTGTCAGCAACACA----------------------------------------------------------TTCCTGGT--------------------GACATCAGAGGTGTTCAGAA---TGCCCACCTCCAGAGACTCTACTCTTGGAAACACAGAGGAAATATCACTACCTGTAAGGGGAACCATTTCTGCAATTACTTCTAGAGTTTCAACCATATGGTTGTCAGACACACTGTCAACAGCACTCTCCCCCAGTTCTTTACCTC---------CAAAAATATCCACAGCTTTCCACACCCAGCAGAGTGAA---GAAGCAGAGACCATA---- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7318771 308 - 7796314 ACC--CAAGTGGAATAGTTTCTCAGGAGACATTCCCTTCTGGTAAAACAACCACCTCATCCCCCTCCAGTGTCAGCAACGCA----------------------------------------------------------TTCCTGGT--------------------GACATCAGAGGTGTTCAGAA---TGCCAACCTCCAGAGACTCCACTCTTGGAAACACAGAGGAGATATCACTACCTGTAAGGGGAACCATTTCTGCAATTACTTCTAGAGTTTCAACCATATGGTTGTCAGACACACTGTCAACAGCACTCTCCCCCAGGTCTTTACCTC---------CAAAAATATCCACAGCTTTCCACACCCAGCAGAGTGAA---GGTGCAGAGACCACA---- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73791260 308 + 74750902 CTC--TGAGTGGAACAGTTTCTCAGGAGACACTCCCTTATGCTGAAACAACCACTTCGTCCCCTTCCAGTGTCAGCAGCGCA----------------------------------------------------------TTCCTGGT--------------------AACATCAGAGGTGTCCCGAA---TGCCAACCTCCGCAGCTTCTACTCTTGGAAACACAGAGGAGACAGCGCGATCTGTAAGGGGAACGACTTCTGCCATCACTTCTCAAGTTTCAACCAGATGGTGGTCAGACACCCTGTCAACAGCACTCTCCCCGAGTTCTTTACCTC---------CAAAACTACCCCCAGCTTTCCACACCCACCCGAGTGAG---GGTGCAGAGACCACA---- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17242913 308 - 17725628 ATC--TGAGTGGAACAGTTTCTCAGGAGACCCTCCCTTCTGGCGGAACAACCACCTCGTCCCCTTCCAGTGACAGCAGCACA----------------------------------------------------------TTCCCGGC--------------------AGCGTCGGAGGTGTCCGGAA---CGCCAGCCTCCACAGAGTCCGCTCTTGGAAACACAGAGGAGACATCACTATCCGTAAGTGGATCCATCTCTGCCATCACTTCTAAAGTTTCGACCGTATGGTGGTCAGACGCACTGTCAACGGCACTGTCCCCCATGTCTTTACCTC---------CAGAACTATCCACAGCTCTCCACACCCACCTGAGTGAA---GGTGCAGAGACCACA---- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6330465 308 + 6778120 ATC--TGAGTGGAACAGTTTCTCAGGAGACACTCCCTTCTGGTGCAACAACCACCTTATCCCCTTCCAGTGTCAGCAACACA----------------------------------------------------------TTCCCAGT--------------------AACCTCAGAGGTGTTCAGAA---TGCCAGCCTCCACAGATTCTACTCTTGGAAACACAGAGGAGACATCACTATCTGTAAGTGGAACCATTTCTGCCATCACTTCTAAAGTTTCGACCATATGGTGGTCAGACACACTGTCAACAGCACTCTCCCCCAGTTCTTTACCTC---------CAAAACTATCCACAGCTTTCCACACCCACCCGAGTGAA---GGTGCAGAGACCACA---- i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 2288916 404 - 31377067 ACCTACAGATGACTCGA---CCCAGGACATGGCCTTGTCTGACACACCAGGTACTTCATCCCTTTCCAGTGTCAGCCACACACCTTCCGCAGTGACAGAAATACCCACACCATCAGCCTCCCCTGGTGACACCTCTTTGGTTCCCAGTGTAAGCAACACATCAGCAACGACATCAGAGGTCCCGACAACACCACCAATTGCAACAGACACCTCAGCAGGAACCACAAGGCACACGTCACTACCGGTAATGGGAAGTGTTACCCACATCAGCTCAACAGGCCTAATGACAAGTGGACCAGGGGGACACTCAACAGCACACTCTTCCCTGACTTCTACTCTGGAGACAACAGAGTCATCTCAGGGTCACTCCACCCAGGCCATGGAGATCAGCACAGAGTCTGGAGCCA i canFam3.chr33 I 1 C 0 e otoGar3.GL873829 154561 1515 + 608964 T e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=1989657.000000 s hg38.chr3_KI270934v1_alt 4542 459 + 163458 GGACGGCCTCATGAGAGGAGCTCATTCTCTCCAGGTGTGTCTC----AAGAAATATTTACTCTACATGAAACAAC----AACATGGCC--------------------------TTCCTCATTCTCCAGCAAAGGCCACACAACTTGGTCACAAACAGAACTGCCCTCAACATCA-----------------------------------------------------------ACAGGTGCTGCC-ACTAGGCTTGTCACAGGAAATCCATCTA------------------------CAGGGACAGCTGGCACTATTCCAAGGGTCCCCTCTAAGGTCTCAGCAATAGGGGAACCAGGAGA--GCCCACCA-CATACTCCTCCCACAGCACAACTCTCCCAAAAACAACAGGGGCAGGCGCCCAGACACAATGGACACAAGAAACGGGGACCACTGGAGAGGCTCTTCTCAGCAGCCCAAGCTACAGTGTGACTCAGATGATAAAAACGGCCACATCCCCATCTTCTTCACCTATGCTGGATAGACACACATCCCAACAAATTACA-ACGGCACCATC---A s panTro5.chr3 2465889 459 - 202621043 GGACGGCCTCATGAGAGGAGCTCATTCTCTCCAGGTGTGCCTC----AAGAAATATTTACTCCACATGAAACAAC----AACATGGCC--------------------------TTCCTCATTCTCCAGCAAAGGCCACACAACTTGGTCACAAACAGAACTGCCCTCAACATCA-----------------------------------------------------------ACAGGTGCTGCC-ACTAGGCTTGTCACAAGAAATCCATCTA------------------------CAGGGACAGCTGGCACTATTCCAAGGGTCCCCTCTGAGGTCTCAGCAATAGGGGAACCAGGAGA--GCCCACCA-CATACCCCTCCCACAGCATAACTCTCCCAAAAACAACAGGGGCAGGTGCCCAGACACAATGGACACAAGAAACGGGGACCACTGGAGAGGCTCTTGTCAGCAGCCCAAGCTACAGTGTGACTCAGATGATAAAAACGGCCACATCCCCATCTTCTTCCCCTATGCTGGATAGACACACATCACAACAAATTACA-ATGGCACCATC---A i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 187615 459 + 189199 GGACGGCCTCATGAGAGGAGCTCATTCTCTCCAGGTGTGTCTC----AAGAAATATTTACTCCACATGAAACAAC----AACATGGGC--------------------------TTCCTCATTCTCCAGCAAAGGCCACACAACTTGGTCACAAACAGAACTGCCCTCAACATCA-----------------------------------------------------------ACAGGTGCTGCC-ACTAGGCTTGTCGCAGGAAATCCATCTA------------------------CAGGGACAGCTGGCACTCTTCCAAGGGTCCCCTCTGAGGTCTCAGCAATAGGGGAACCAGGAGA--GCCCACCA-CATACTCCTCCCACAGCACAACTCTCCCAAAAACAACAGGGGCAGGTGCCCAGACACAATGGACACAAGAAACGGGGACCACTGGAGAGGCTCTTGTCAGCAGCCCAAGCTACAGTGTGACTCAGATGATAAAAACGGCCACATCCCCATCTTCTTCACCTATGCTGGATAGACACACATCACAACAAATTACA-ACGGCACCATC---A i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19102733 462 - 19675229 GGACGGCCTCATGAGAGGAGTTCAGTGTCTCCAGGTGTGTCTC----ATGAGACATTTCCTCCACATGAAACCAT----AACATGGCC--------------------------TTCCTCATTCTCCAGTGAAGACCGCACAACTCGCTCACCAAAAGAACTGCCCTCAACACCA-----------------------------------------------------------ACAGGTGCTGCC-ACTAGGCTTGTCACAGGAAGTCCAATAG---------------------TGCCAGGGACAGCTGGCACTATTCCAAGGGTCCCCTCTGAGGTCTCAACAATAGGGGAATCAGGACA--GCCCACCA-CACACCCCTCCCACAGCACAACTCTCCTGGAAACAACAGGGGCAGGTGCCCAGACACAATGGACACAAGAAACGGGGACCACTGGAGAGGTTCCTATCAACAGCCCAAGCTACAGTGTGACTCAGATGATAAATACGGCCACATCCCCATCTTCTTCACCTATGCTGGATGGACACACATCACAACAAATTACA-ATGGCACCATC---A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16339187 462 - 16847902 GGATGGCCTCATGAGAGGAGTTCAGTCTCTCCAGGTGTGTCTC----ATGAGACATTTCCTCCACATGAAACCAT----AACATGGCC--------------------------TTTCTCATTCTCCAGTGAAGACCGCACAACTCGCTCACCAAAAGAACTGCCCTCAACACCA-----------------------------------------------------------ACAGGTGCTGCC-ACTAGGCTTGTCACAGGAAGTCCAATAG---------------------TGCCAGGGACAGCTGGCACTATTCCAAGGGTCCCCTCTGAGGTCTCAACAATAGGGGAATCAGGACA--GCCCACCA-CACACCCCTCCCACAGCACAACTCTCCTGGAAACAACAGGGGCAGGTGCCCAGACACAATGGACACAAGAAACGGGGACCACTGGAGAGGTTCCTATCAACAGCCCAAGCTACAGTGTGACTCAGATGATAAATACGGCCACATCCCCATCTTCTTCACCTATGCTGGATGGACACACATCACAACAAATTACA-ATGGTACCATC---A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91317864 456 + 91754291 GGACGGCCTCATGAGAGGAGTTCAGTCTCTCCAGGTGTGTCTC----ATGAGACATTTCCTCCACATGAAACCAT----AACATGGCC--------------------------TTCCTCATTCTCCAGTGAAGACCGCACAACTCGCTCACCAAAAGAACTGCCCTCAACACCA-----------------------------------------------------------ACAGGTGCTGCC-ACTAGGCTTGTCACAGGAAGTCCAATAG---------------------TGCCAGGGACAGCTGGCACTATTCCAAGGGTCCCCTCTGAGGTCTCAACAATAGGGGATTCAAGACA--GCCCACCA-CACACCCCTCCCACAGCACAACTCTCCTGGAAACAACAGGGGCAGGTGCCCAGACACAATGGACACAAGAAACGGGGACCACTGGAGAGGTTCCTATCAACAGCCCAAGCTACAGTGTGACTCAGATGATAAAT------ACAACCCCATCTTCTTCACCTATGCTGAATGGACACACATCACAACAAATTACA-ATGGCACCATC---A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1363408 462 + 1977891 GGATGGCCTCATGAGAGGAGTTCAGTCTCTCCAGGTGTGTCTC----ATGAGACATTTCCTCCACATGAAACCAT----AACATGGCC--------------------------TTTCTCATTCTCCAGTGAAGACCGCACAACTCGCTCACCAAAAGAACTGCCCTCAACACCA-----------------------------------------------------------ACAGGTGCTGCC-ACTAGGCTTGTCACAGGAAGTCCAATAG---------------------TGCCAGGGACAGCTGGCACTATTCCAAGGGTCCCCTCTGAGGTCTCAACAATAGGGGAATCAGGACA--GCCCACCA-CACATCCCTCCCACAGCACAACTCTCCTGGAAACAACAGGGGCAGGTGCCCAGACACAATGGACACAAGAAACGGGGACCACTGGAGAGGTTCCTATCAACAGCCCAAGCTACAGTGTGACTCAGATGATAAATACGGCCACATCCCCATCTTCTTCACCTATGCTGGATGGACACACATCACAACAAATTACA-ATGGTACCATC---A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7319079 459 - 7796314 GGACGGCCTCATGAGAGGAGTTCAGTCTCTCCAGGTGTGTCTC----ATGAGACATTTACTCCGCATGAAACCAC----AACATGGCC--------------------------TTCCTCATTCTCCAGTGAAGACCGCACAACTTGGTCACCAAAAGAACTGCCCTCAACACCA-----------------------------------------------------------ACAGGTGCTGCC-ACTAGGCTTGTCACAGGAAGTCCATTTA------------------------CAGGGACAGCTGGCACTATTCCAAGGGTCCTCTCTGAGGTCTCAACAATAGGGGAATCAGGACA--GCCCACCA-CACACCCCTCCCGCAGCACAACTCTCCTGGAAACAACAGGAGCAGATGCCCAGACACAATGGACACAAGAAACGGGGACCACTGGAGAGGTTCTTATCAACAGCCCAAGCTACAGTGTGACTCAGATGATAAATACGGCCACATCCCCATCTTCTTCACCTATGCTGGATGGACACACATCACAACAAATTACA-ATGGCACCATC---A i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73791568 447 + 74750902 GGACGGCCTCATGAAAGGAGCTCAGTCTCTCCAGGTGTGTCTC----ATGAGACGTTTACTCCACATGAAAC-------AACACTGAC--------------------------T---------TCCAGCGAAGGCCTCACAACTTGGTTACCAAAAGAGCTGCCCTCAACACCA-----------------------------------------------------------ACAAGTGTTGCC-ACTATGCTGGTCACAGGAAGTCCATCTA------------------------CGTGGACAACTGGCACTATTCCAGGAGTCCCTTCTGAGGTCTCAACAATAGGGGAACCAGGGCA--GCCCACCA-CACGCCCCTCCCATAGCACAGCTCTCCCAGAAACAACAGGGGCAAGTGCCCAGACACAATGGACACAAGAAATGGGGACCACTGGAGAGGTTCTTGTCCACAGCCCAAGATACAGTGTGACCCAGATGACAAAAGCAGCCACATCGCCCCCTTCCTCACCGATGCTGGATGGACACACACCACCACAAAGTACA-ACGGCACCGTC---A i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17243221 453 - 17725628 GGACGGCCTCACGAGAGCAGCTCAGTCTCTCCAAGCGCGTCTC----AGGAGACGTTTACTCCACGTGAAGC-------AACATGGAC--------------------------TTCTTCACTCTCCAGTGAAGGCAGCACGACTTGGTTACCAAAAGAGCTGCCCTCAACACCA-----------------------------------------------------------CCAAGTGCTGCC-ACTGTGCTTGTCACAGGAAGTCCAGCTA------------------------CGTGGACAGCTGGCACTATTCCAAGAGTCCCTTCTGAGGTCTCAACAACAGGGGAACCAGGACA--GCCCGCCA-CACGCCCCTCCCATAGCACAACTCTCCCAGAAACGACAGGGGCAGGTGCCCAGACACAATGGACACAAGAAACGGGGACCACTGGAGAGGTTCGTGTCCACAGCCCAAGATACGGTGTGACCCAGATGACAGAGGCAGCCACATCCCCATCTTCCTCACCTATGCTGGATGGACACA---CACAACAAATTACG-ATGGCACCATC---G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6330773 456 + 6778120 GGACGGCCCCATGAAAGGAACTCATTCTCTCCAAGGGCATCTC----CTGAGACGTTTACTCCGCATGAAAC-------AACATTGAC--------------------------TTCTTCATTCTCCAGTGAAGGCCACACAACTTGGTTACCAAAAGAGCTGCCTTCAACACCA-----------------------------------------------------------ACAAGTGCTGCC-ATTATGCTTGTCACAGCAAGTCCCGCTA------------------------CGTGGACAGCTGGCAGTATTCCAGGAGTCCCTTCTGAGGTCTCAACAATCGGGGAACCAGGACA--GCCCAGCA-CACGCCCCTCCCATAGCACAACTCTCCCAGAAACAACAGGGGCAGGTGCCCAGACACAATGGACACAAGAAACGGGGACCACTGGAGAGGTTCTTGTCCACAGCCCAAAATACAGTGTGACCCAGATGACAAAAGCAGCCACATCCCCATCTTCCTCACCTATGCTGGATGGACACACACCACAAAAAATTACA-ATGGCACCATC---A i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 2289320 540 - 31377067 GCAGTGTCTCA-GCGATGATCACATCCTCTCCCTCATCCTCCCGAAGAGGAGACACTC-CTACAGATGGCACGACCCAGGACATGGACACAGCCTTGTCTGACACACCAAGCAGTTCGTCCCCTTCCAGTGTCAGCCACACACCTTCCGCAGTGACAGAAATACCCACACCATCAGCTTCCCCTGGGGACACCTCATCATCTTCCAGTGAAAGCAGCACATCACCAACAGTATCACAGGTCCTGACGACACTGATGGCAACAGACACCCCAGCAGGCACAACAAGGCACACGTCACCACCTGAAACGGGAAGTGTTACTCCA---GTCAGCTCAACAGGCTCAATGACAGGTGGACCAGGGGGACACTCACCAGCACACTCTTCCCTGACTTCTACT---CCAGAGACAACAGAGTCA---TCTCAGGGTTACACGACCCAGACCATGGAGACCAGCACAGAGTCTGCAACCAGCA--------------GTGTCTCAG-CGATGATCACATCCACTCCCTCATCCTCC---------CGAAGTGAACACACACC---------TACAGATGACTCAACCCAGG i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 154561 1515 + 608964 T e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 78927 0 - 190779 C a score=260382.000000 s hg38.chr3_KI270934v1_alt 5001 57 + 163458 ACAAATCATTCAACAATACATTCCACAAGCACCTCTCCTCAGGAATCACCAGCTGTT s panTro5.chr3 2466348 57 - 202621043 ACAAAGCATTCAACAATACATTCCACAAGCACCTCTCCTCAGGAATCATCAGGTGTT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 188074 57 + 189199 ACAAATCATTCAACAATACATTCCACAAGCACCTCTCCTCAGGAATCACCAGCTGCT i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19103195 57 - 19675229 ACAAATCATTCAACAATACATTCCACAAACACCTCTCCTCAGGAATCACTGGCTGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16339649 57 - 16847902 ACAAATCATTCAACAATACATTCCACAAACACCTCTCCTCAGGAATCACTGGCTGTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91318320 57 + 91754291 ACAAATCATTCAACAATACATTCCACAAACACCTCTCCTCAGGAATCACTGGCTGTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1363870 57 + 1977891 ACAAATCATTCAACAATACATTCCACAAACACCTCTCCTCAGGAATCACTGGCTGTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7319538 57 - 7796314 ACAAATCATTCAACAATACGTTCCACAAACACCTCTCCTCAGGAATCACTGGCTGTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73792015 57 + 74750902 ACATATCCTCCAACAACACACCCTGTGAGCACCTCTCCTCGGAGACCGTCGGCTGTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17243674 57 - 17725628 ACGTATCGTTCAACAATACACCCCGTAAGCACCTCTCCTCAGAGATCATCGGCTGTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6331229 57 + 6778120 ACATATCATTCAACAATACATCCCGTAAACACCTCTCCTCAGAGATCATCGGCTGTT i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 2289860 38 - 31377067 ACATGGCCTTGTCTGACACAC----CAAGCACTTCATCCC---------------TT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2661445 57 - 6579706 ACAAGGCGCTCAACACCATCCTCTGCCAGCCCTTCTCCTGTGGAGTCGTCGGCTGTT i dasNov3.JH569502 N 0 C 0 e otoGar3.GL873829 154561 1515 + 608964 T e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 78927 0 - 190779 C a score=990643.000000 s hg38.chr3_KI270934v1_alt 5058 198 + 163458 TCCCAAAGGGGTCACACTCAAGCCCCGCAGACCACACAAGAAT-CACAAACCACGAGGTCCGTCTCCCCCATGACTGACA---CCAAGACAGTCACCACCCCAGGTTCTTCCTTCACAGCCAGTGGGCACTCGCCCTCAGAAATTGTTCCTCAGGACGCACCCACCATAAGTGCAGCAACAACCTTTGCCCCAGCTCCCACC s panTro5.chr3 2466405 198 - 202621043 TCCCAAAGAGGTCACACTCAAGCCCTGCAGATGACACAAGAAT-CACAAACCACGAGGTCCGTCTCCCCCATGACTGACA---TGAAGACAGTCACCACCCCAGGTTCTTCCTTCACAGCCAGTGGGCACTCGCCCTCAGAAATTGTTCCTCAGGACGCACCCACCATAAGTGCAGCAACAACCTTTGCCCCAGCTCCCACC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 188131 198 + 189199 TCCCAAAGAGGTCACACTCAAGCCCCGCAGACCACACAAGAAG-CACAAACCACGAGGTCCGTCTCCCCCATGACTGACA---CCAAGACAGTCACCACCCCAGGTTCTCCCTTCACAGCCAGTGGGCACTCGCCCTCAGAAATTGTTCCTCAGGACGCACCCACCATAAGTGTAGCAACAACCTTTGCCCCAGCTCCCACC i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19103252 198 - 19675229 TCCCAGAGAGGTCACACTCAAGCCCCACAGACCACACAAGAAT-CCCAAACCACAAGGTCCATCTCCCCTGTGACTGACA---CCAAGACAGTCACCACCCCAGGCTCTTCCTTCACAGCCAGTGGGCACTCACCCTCAGAAATTGCTCCTCAGGACGCACCTACCATAAGTGCAGCGACAACCTTTGCCCCAGCTCCCACT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16339706 198 - 16847902 TCCCAGAGAGGTCACACTCAAGCCCCGCAGACCACACAAGAAT-CCCAAACCACAAGGTCCATCTCCCCTGTGACTGACA---CCAAGACAGTCACCACCCCAGGCTCTTCCTTCACAGCCAGTGGGCACTCACCCTCAGAAATTGCTCCTCAGGATGCACCTACCATAAGTGCAGCGACAACCTTTGCCCCACCTCCCACT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91318377 198 + 91754291 TCCCAGAGAGGTCACACTCAAGCCCCGCAGACCACACAAGAAT-CCCAAACCACAAGGTCCATCTCCCCTGTGACTGACA---CCAAGACAGTCACCACCCCAGGCTCTTCCTTCACAGCCAGTGGGCACTCATCCTCAGAAATTGCTCCTCAGGACGCACCTACCATAAGTGCAGCGACAACCTTTGCCCCAGCTCCCACT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1363927 198 + 1977891 TCCCAGAGAGGTCACACTCAAGCCCCGCAGACCACACAAGAAT-CCCAAACCACAAGGTCCATCTCCCCTGTGACTGACA---CCAAGACAGTCACCACCCCAGGCTCTTCCTTCATAGCCAGTGGGCACTCACCCTCAGAAATTGCTCCTCAGGACGCACCTACCATAAGTGCAGCGACAACCTTTGCCCCACCTCCCACT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7319595 198 - 7796314 TCCCAGAGAGGTCACACTCAAGCCCCGCAGACCACACAAGAAT-CCCAAACCACAAGGTCCATCTCCCCTGTGACTGACA---CCAAGACAGTCACCACCCCAGGCTCTTCCTTCACAGCCAATGGGCACTCGCCCTCAGAAATTGCTCCTCAGGACGCACCTACCATAACTGCAGCGACAACCTTTGCCCCAGCTCCCACT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73792072 201 + 74750902 TCCCACAGAGGTCACACTCCAGCCTCGAAGACCACACGAGAAT-CCCAAACCACGAGGTCCGTCTCCCCCGTGACTGACAGCCTCAAGACAGCCACCACCCCAGCTTCTTCCTTCACAGCCAGCGGACACTCGCCCTCAGAAACTGTTCCTCAGGACGCATCCGCCGTCAGTGCAGCAACAACCTTCACCCCAGCCCCCTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17243731 201 - 17725628 TCCCAGAGTGGTCACACTCCAGCCTCGAAGACCACACGGGAAT-CCCAAACCACGAGGTCCATCTCCCCCGTGACTGACGGCTTCCAGACAGCCACCACCCCAGCTTCTTCCTTCACAGCCAGCCAACACCCGCCCTCAGAAATGGCTCCTCAGGACGCATCCACCATAAGTGCAGCAACAACCTTCACCCCAGCGCCCACC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6331286 201 + 6778120 TCCCAGGGAGGTCACACTCCAGCCTCGAAGACCACACGAGAAT-CCCAAGCCACAAGGTCCATCTCCCCCGTGACTGACAGCCTCAAGACAGCCACCACCCCAGCTTCTTCCTTCACAGCCAGCGGACACTCGCCCTCAGAAATTGTTCCTCAGGACGCATCCACCGTAAGTGCCACAACAACCTTCACCCCAGCCCCCACC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 153046 168 + 608964 TCACAGATACATCACACTGAAGCCTCACAGACCACACAGGAAT-CCCAAACCACGAGGTCAGTGTCAACCATGACCAACACCACCAACACGGTCACAACTACAGGCTCTTCTCTGACACCCACTGGACACTCACTCTCAGAA---------------------------------GCCACAACCTTCCACCCAGCTCCCTCG i otoGar3.GL873829 T 1515 C 0 s canFam3.chr33 2289898 98 - 31377067 TCCAGTGTCAGCCACACACCTTCCGCAGTG-----ACAGAAATACCCACACCA-----TCAGCCTCCCCTGGG---GACA------------------CTTCAAGATCTT---------CCAGTGGA-----------------------------------------------AGCAACA----------CATC------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2661502 201 - 6579706 TCTGAGAGGGGGCACACGCAAGGCGCACAGACCACCCTCGAGT-CCCCGACCACGGCATCAGGCCTCCCCGGGACACACATGGTCTGGTCCGTCCCGCCTACCACTCCTTCATCCAGCCCAAGTGCACACTCGGCCTCAGAAAGTGGTCGTCTGGATACAGCCACCGCAGGTTCAAGGACAGGCTTCAGCCCAACGACCTCC i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 78927 0 - 190779 C a score=239329.000000 s hg38.chr3_KI270934v1_alt 5256 34 + 163458 GGGGATGGTCACACAACCCAGGCCCCGACCACAG s panTro5.chr3 2466603 34 - 202621043 GGGGATGGTCACACAACCCAGGCCCCGACTACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78927 34 - 190779 GGGGATGGTCACACAACCCAGGCCCCGACTACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 188329 34 + 189199 GGGGATGGTCACACAACCCAGGCCCCGACCACAG i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19103450 34 - 19675229 GGGGATGGTCACACAACCCAGGCCCCAACCACAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16339904 34 - 16847902 GGGGATGGTCACACAACCCAGGCCCCAACCACAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91318575 34 + 91754291 GGGGATGGTCACACAACCCAGGCCCCAACCACAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1364125 34 + 1977891 GGGGATGGTCACACAACCCAGGCCCCAACCACAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7319793 34 - 7796314 GGGGATGGTCACACAACCCAGGCCCCAACCACAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73792273 34 + 74750902 AGGGACGGTCACAGGCCCCAGGCCCCAGCCACAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17243932 34 - 17725628 AGGGACGGTCACACAACCCAGGCCCGAACCACAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6331487 34 + 6778120 AGGGTTGGGCACACAGCCCAGGCCCCAACCACAG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 153214 34 + 608964 GGAGATGGTCACACAACCCAGGGCAcaaccacag i otoGar3.GL873829 C 0 I 962 s canFam3.chr33 2289996 26 - 31377067 ACCAATG-----ACATCACAGGTCCCGACGA--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2661703 34 - 6579706 GGGGAGAGCCACACTACCCGGGCGCCAACCACAC i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=1432292.000000 s hg38.chr3_KI270934v1_alt 5290 266 + 163458 CACTGCAGGCAGCACCCAGCAGCCATGATGCCACCCTGGGGCCCTCAGGAGGCACGTCACTTTCCAAAACAGGTGCCCTTACTCTGGCCAACTCTGTAGTGTCAACACCAGGGGGCCCAGAAGGACAATGGACATCAGCCTCTGCCAGCACCT---CACCTGACACAGCAGCAGCCATGACCCATACCCACCAGGCTGAGAGCACAGAGGCCTCTGGAC---AAACACAGACCAGCGAACCGGCCTCCTCAGG--GTCACGAACCACCTCAGCG s panTro5.chr3 2466637 266 - 202621043 CACTGCAGGCAGCACTCAGCAGCCATGATGCCACCCTGGGGCCCTCAGGAGGCACGTCACTTTCCAAAACAGGTGCCCTTCCTCTGGCCAACTCTGTAGTGTCAACACCAGGGGGCCCAGAAGGACAATGGACATCAGCCTCTGCCAGCACCT---CACCTGACACAGCGGCAGCCATGACCCAAACCCACCAGGCTGAGGGCACAGAGGCCTCTGGAC---AAACACAGACCAGCGAACCGGCCTCCTCAGG--GTCAGGAACCACCTCAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78961 266 - 190779 CACTGCAGGCAGCACTCAGCAGCCATGATGCCACCCTGGGGCCCTCAGGAGGCACGTCACTTTCCAAAACAGGTGCCCTTCCTCTGGCCAACTCTGTAGTGTCAACACCAGGGGGCCCAGAAGGACAATGGACATCAGCCTCTGCCAGCACCT---CACCTGACACAGCAGCAGCCATGACCCAAACCCACCAGGCTGAGGGCACAGAGGCCTCTGGAC---AAACACAGACCAGCGAACCGGCCTCCTCAGG--GTCAGGAACCACCTCAGCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 188363 266 + 189199 CACTGCAGGCAGCACCCAGCAGCCATGATGCCACCCTGGGGCCCTCAGGAGGCACGTCACTTTCCAAAACAGGCGCCCTTCCTCTGGCCAACTCTGTAGTGTCAACACCAGGGGGCCCAGAAGGACAATGGACATCAGCCTCTGCCAGCACCT---CACCTGACACAGCAGCAGCCATGACCCAAACCCACCAGGCTGAGGGCACAGATGCCTCTGGAC---AAACACAGACCAGCGAACTGGCCTCCTCAGG--GTCAGGAACCACCTCAGCC i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19103484 257 - 19675229 TACTGCAGGTGGCACCTAGCAGCCCTGACTCCACCCTGGCGCCCTCAGGAGGCGCATCACTTTCCATAACAGGTGCCCTTC--CTGG-------TGTAGTGTCAACACCAGGGGTCCCAGAAGGACGATGGACATCAGCCTCTGCCAGCACCT---CACCTGAAACAGCAGCAGCCATGACCCAAACCCACCAGGCTGAAGGCACAGAGGCCTCTGGAG---AAACACAGACCAGTGAACCGGCCTCCTCAGG--GTCGGGCACCACCTCAGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16339938 257 - 16847902 TACTGCAGGCGGCACCCAGCAGCCCTGACTCCACCCTGGCGCCCTCAGGAGGCGCATCACTTTCCATAACAGGTGCCCTTC--CTGG-------TGTAGTGTCAACACCAGGGGTCCCAGAAGGACGATGGACATCAGCCTCTGCCAGCACCT---CACCTGACACAGCAGCAGCCATGACCCAAACCCACCAGGCTGAAGGCACAGAGGCCTCTGGAG---AAACACAGACCAGTGAACCGGCCTCCTCAGG--GTCGGGCACCACCTCAGAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91318609 257 + 91754291 TACTGCAGGCGGCACCTAGCAGTCCTGACTCCACCCTGGCGCCCTCAGGAGGTGCATCACTTTCCATAACAGGCGCTCTTC--CTGG-------TGTAGTGTCAACACCAGGGGTCCTAGAAGGACGATGGACATCAGCCTCTGCCAGCACCT---CACCTGACACAGCAGCAGCCATGACCCAAACCCACCAGGCTGAAGGCACAGAGGCCTCTGGAG---AAACACAGACCAGTGAACCGGCCTCCTCGGG--GTCGGGCACCACCTCAGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1364159 257 + 1977891 TACTGCAGGCGGCACCCAGCAGCCCTGACTCCACCCTGGCGCCCTCAGGAGGCGCATCACTTTCCATAACAGGTGCCCTTC--CTGG-------TGTAGTGTCAACACCAGGGGTCCCAGAAGGACGATGGACATCAGCCTCTGCCAGCACCT---CACCTGACACAGCAGCAGCCATGACCCAAACCCACCAGGCTGAAGGCACAGAGGCCTCTGGAG---AAACACAGACCAGTGAACCGGCCTCCTCAGG--GTCGGGCACCACCTCAGAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7319827 257 - 7796314 CACTGCAGGCGGCACCCAGCAGCCCTGACTCCACCCTGCGGCCCTCAGGAGGCGCATCACTTTCCATAACAGGCGCCCTTC--CTGG-------TGTAGTGTCAACACCAGGGGGCCCAGAGGGACGATGGACATCAGCTTCTGCCAGCACCT---CACCCGACACAGCAGCAGCCATGACCCAAACCCACCAGGCTGAAGACACAGAGGCCTCTGGAG---AAACACAGACCAGCGAACCGGCTTCCTCAGG--GTCGGGCACCACCTCAGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73792307 266 + 74750902 CACCGCAGGCAGCACCCGGCAGCCCTGACGCCACCCTGGGGCCCTCAGGAGGCACATCGCTTTCCATCACAGGCACCATTCCTCCGGCCACCTCTGCGGTGTCAACACCAGTGGATGCAGAAGGACGATGGACATCAGCCTCTGCCAGCACGT---CACCCAGCACAGCACCCGCTATGACCCAACCCCACCAGGCTCGGGGCACAGAGGCCTCCGGAG---AAACACAGACCAGCCAACCGGCCTCCTCAGG--GTCAGGCCCCATCCCAGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17243966 266 - 17725628 CACTGCAGGCGGCACCCAGCAGCCCCGACGCCACCCTGGGGCCCTCAGGAAGGACATCGCCTTCCATCACAGGGGCCATTCCTCCGGCCACCTCTGTGGTGTCAACACCAGTGGGCGCAGAGGGACGGTGGACAGCAGCCTCTGCCAGCGCAT---CACCCAACACAGCGCCAGCTATGACCCAAACCCACCAGGCTCGGGGCACAGAGGCCTCTGGAG---GAACACAGACCAGCCAACCAGCCTCCTCAGG--GTCAGGCACCATCGCGGCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6331521 266 + 6778120 CACTGCAGGCGGCACCCAGCAGCCCTGGCGCCACCCTGGGGCCCTCAGGAGGCACATCGCTTTCCATCACAGGTGCCATTCCTCCGACCACCTCTGTGGTGTCAACACCAGTGGGCGCAGAAGGACGATGGACATCAGCCTCTGCCAGCACGT---CACCCAACACAGCACCAGCTATCACCCAAACCCACCAGGCTCGGGGCACAGAGGCCTCTGGAG---AAACACAGACCAGCCAACCGGCCTCCTCAGG--GTCAGGCACCATCGCAGCG i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 2290022 230 - 31377067 CACTGATTGCATCA------------GACACCCCAGCAGGAACCACGGGACACACGTCACCACCTGAAACGGGAAGTGTTACACCAGTCAGCTCAACAGACTCAATGACAAGTGGACCAGGGGGACACTCAACAGCACACTCTTCCCTGACTTCTACTCCAGAGACAACAGC-GTCAT--CTCAGGGTCACTCCACCCAGACCATGGAGACT-----------AGCACAGAGTCTACAACCAGC------------------AGTGTCTCAGCG i canFam3.chr33 C 0 I 537 s dasNov3.JH569502 2661737 269 - 6579706 AGCAGCGGGCAACACCAACGCACCCTGACAGCACCCTGGGAACCTCAGGGGACACGTCGTTTTCCCAAATGAGCACCCTGGGCCCCGTCACCTCTGGAGTCTCAGCACCGGGGTCCCCGGGCAGGCAAGCAACATCGCCTTCCACCGGCACCT---CACCTGACGCCACACCAGCCATTTCGCAGGCTCAGCAAACTCAAGACACACGGACCTCTGGGGTTCCTCCTCACACCAGCAAAGCGGG--CCTGAGGCTGACTGACACGACCGTGGTG i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 153248 962 + 608964 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=504382.000000 s hg38.chr3_KI270934v1_alt 5556 91 + 163458 GGCACAGCTACCCCTTCC------TCATCCGGGGCGAGTGGCACAACACCTTCAGGAAGCGAAG------GAATATCCA------------CCTCAGGAGAGACGACAAGGTTTT- s panTro5.chr3 2466903 91 - 202621043 GGCACAGCTACCCCTTCC------TCATCCAGGGCGAGCGGCACAACACCTTCAGGAAGCGAAG------GAATATCCA------------CCTCAGGAGAGACGACAAGGTTTT- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79227 91 - 190779 GGCACAGCTACCCCTTCC------TCATCCAGGGCGAGCGGCACAACACCTTCAGGAAGCGAAG------GAATATCCA------------CCTCAGGAGAGACGACAAGGTTTT- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 188629 91 + 189199 GGCACAGCTACCCCTTCC------TCATCCAGGGCGAGCGGCACAACACCTTCAGGAAGTGAAG------GAATATCCA------------CCTCAGGAGAGACGACAAGGTTTT- i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19103741 91 - 19675229 GGCACAGCTACCCCTTCC------TCATCCAGGGCGAGCAGCACAACACCTTCAGGAAGCGAAG------GAATATCCA------------TCACAGGAGAGACCACATGGTTCT- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16340195 91 - 16847902 GGCACAGCTACCCCTTCC------TCATCCAGGGCGAGCAGCACAACACCTTCAGGAAGCGAAG------GAATATCCA------------TCACAGGAGAGACCACATGGTTCT- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91318866 91 + 91754291 GGCACAGCTACCCTTTCC------TCATCCAGGGCGAGCGGCACAACACCTTCAGGAAGCGAAG------GAATATCCA------------TCACAGGAGTGACCACATGGTTCT- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1364416 91 + 1977891 GGCACAGCTACCCCTTCC------TCATCCAGGGCGAGCAGCACAACACCTTCAGGAAGCGAAG------GAATATCCA------------TCACAGGAGAGACCACATGGTTCT- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7320084 91 - 7796314 GGCACAGCTACCCCTTCC------TCATCCAGGGCGAGTGGCACAACACCTTCAGGAAGCGAAG------GAATATTCA------------CCTCAGGAGAGACCACATGGTTCT- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73792573 91 + 74750902 GGCACAGCTACCCCTTCC------TCATCCAGGACAAGTGGCACAACACCTTCAGGAAGCCACG------GAATGTCCA------------CCTCAGGGGAGACCACGCGGTTCT- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17244232 91 - 17725628 GGCTCGGCCACCCCTTCC------TCATCCAGGACGAGTGGCACAACACCTTCAGGAAGCCACG------GAATGTCCA------------CCTCAGGCGAGACCACGTGGTTCT- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6331787 91 + 6778120 GGCACAGCTACCCCTTCC------TCATCCAGGACGAGTGGCACAACACCTTCAGGAAGCCACG------GAATGTCCA------------CCTCAGGCGAGACCACGCCACTCT- i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 2290789 94 - 31377067 GGCACACCAAGCACTTCA------TCGTCTTCTACTATCAGCCACACACCTTCCGCAGTGACAG------AAATACCCACACCATCAGCCTCCCCTGGTGACACCT---------- i canFam3.chr33 I 537 C 0 s dasNov3.JH569502 2662006 103 - 6579706 GGCACCACTGCCACATCCACATCGCCATCCACCGCAACCAGCCAAACCACTGCAGGAAGCGCTGCGCCGCAACCATTCC------------CCTCTGCTGGGACCACA-GCCTCTG i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 153248 962 + 608964 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=419495.000000 s hg38.chr3_KI270934v1_alt 5647 69 + 163458 CATCAAACCCCTCCAGGGACAGTCACACAACCCAGTCAACAACCGAATTGCTG--TCCGCCTCAGCCAGTC s panTro5.chr3 2466994 69 - 202621043 CATCAAACCCCTCCAGGGACAGTCACACAACCCAGTCCACAACCGAATTGCTG--TCCGCCTCAGCCAGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79318 69 - 190779 CATCAAACCCCTCCAGGGACAGTCACACAACCCAGTCCACAACCGAATTGCTG--TCCGCCTCAGCCAGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 188720 69 + 189199 CATCAAACCCCTCCAGGGACAGTCACACAACCCAGTCAACAACCGAATTGCTG--TCAGCCTCAGCCAGTC i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19103832 69 - 19675229 CGCCAAACCCCTCCAGGGACAGTAACACAACCCAGTCAACAACCGAATTGCTA--TCTGCCTCAGCCAGTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16340286 69 - 16847902 CGCCAAACCCCTCCAGGGACAGTCACACAACCCAGTCAACAACCGAATTGCTA--TCTGCCTCAGCCAGTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91318957 69 + 91754291 CACCAAACCCCTCCAGGGACAGTCACACAACCCAGTCAACAACCGAATTGCTA--TCTGCCTCAGCCAGTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1364507 69 + 1977891 CGCCAAACCCCTCCAGGGACAGTCACACAACCCAGTCAACAACCGAATTGCTA--TCTGCCTCAGCCAGTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7320175 69 - 7796314 CGCCAAACCCCTCCAGGGACAGTCACACAACCCAGTCAACAACCGAATTGCTA--TCTGCCTCAGCCAGTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73792664 69 + 74750902 CACCAAGACCCTCCAGGGACACTCACATCCCCCAGTCAACAAGCGAATTGCCG--TCCCCCTCAGCCAGTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17244323 69 - 17725628 CACCAAGACCGTCCAGGGACACTCACACCCCCCAGTCAACAAGTGGATTGCCG--TCCCCCTCAGCCAGTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6331878 69 + 6778120 CACCAAGACCCTCCAGGGACACTCACACCCCCCAGTCAACAAGCGAATTGCAG--TCCGCCTCAGCCAGTC i cebCap1.NW_016107444v1 C 0 I 420 s otoGar3.GL873829 154210 69 + 608964 CATCAACTCCTTCCAAGGACAAACACACAAGCCAGGCAACAAATGAGTTTTTG--TCCACTTCGATCGGTC i otoGar3.GL873829 I 962 C 0 s canFam3.chr33 2290883 62 - 31377067 CATCA---TCTTCCAGTGGAAGCAACACA------TCAGCAACGACATCACAGGTCCCGACGACACCGATT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2662109 69 - 6579706 CGCCAGCTCTCTCCAGTGACGGCCACACAGCACCCGCAAGCACTGCGTTGTCG--GCCGCAGCAAGCGCGC i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=166170.000000 s hg38.chr3_KI270934v1_alt 5716 36 + 163458 ATGGT-GCCAT---------------CCCAGTAAG---CACAGGAATGGCGTCTT s panTro5.chr3 2467063 36 - 202621043 ATGGT-GCCAC---------------CCCAGTAAG---CACAGGAATGGCGTCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79387 36 - 190779 ATGGT-GCCAC---------------CCCAGTAAG---CACAGGAATGGCGTCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 188789 36 + 189199 ATGGT-GCCAC---------------CCCAGTAAG---CACAGGAATGGCGTCTG i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19103901 36 - 19675229 ATGAT-GCCAC---------------CCCAGTAAG---CACAGGAATGGTGTCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16340355 36 - 16847902 ATGAT-GCCAC---------------CCCAGTAAG---CACAGGAATGGTGTCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91319026 36 + 91754291 ATGAT-GCCAC---------------CCCAGTAAG---CACAGGAATGGTGTCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1364576 36 + 1977891 ATGAT-GCCAC---------------CCCAGTAAG---CACAGGAATGGTGTCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7320244 36 - 7796314 ATGAT-GCCAC---------------CCCAGTAAG---CATGGGAATGGTGTCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73792733 51 + 74750902 CGGAC-GTCACTCGGGCAAGCACCATCCTGGCAAG---CATGGGAACGGGGTCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17244392 36 - 17725628 ATGGT-GTCAC---------------CCCAGAAAG---CACGGGAACGGGGTCCC i saiBol1.JH378146 C 0 I 1177 s otoGar3.GL873829 154279 36 + 608964 CTGCC-TCCAG---------------CCCAGAAAC---CCCAGGAATGATGTCTG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2290945 40 - 31377067 ACAATAGACAC---------------CCCAGCAAGCACCACAGGACACACGTCAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2662178 36 - 6579706 CGGAC-ACTAC---------------CCACGCAAC---CGGGGGACACGCGTCTG i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 6331947 420 + 6778120 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=3806.000000 s hg38.chr3_KI270934v1_alt 5752 1 + 163458 C s panTro5.chr3 2467099 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79423 1 - 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 188825 1 + 189199 C i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19103937 1 - 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16340391 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91319062 1 + 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1364612 1 + 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7320280 1 - 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73792784 1 + 74750902 C i calJac3.chr17 C 0 I 1048 s saiBol1.JH378146 17245605 1 - 17725628 C i saiBol1.JH378146 I 1177 C 0 s otoGar3.GL873829 154315 1 + 608964 T i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2290985 1 - 31377067 C i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2662214 1 - 6579706 T i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 6331947 420 + 6778120 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=147722.000000 s hg38.chr3_KI270934v1_alt 5753 41 + 163458 GATCGTCCCCGGCACCTTTCATCCCA-CCCTCTCTGAGGCCT s panTro5.chr3 2467100 41 - 202621043 GATCGTCCCCGGCACCTTTCATCCCA-CCCTCTCTGAGGCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79424 41 - 190779 GATCGTCCCCGGCACCTTTCATCCCA-CCCTCTCTGAGGCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 188826 41 + 189199 GATCGTCCCCGGCACCTTTCAACCCA-CCCTTTCTGAGGCCT i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19103938 41 - 19675229 GATTGTCCCCAGCACCTTTCCTGTCA-CCCTCTCTGAGGCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16340392 41 - 16847902 GATTGTCCCCAGCACCTTTCCTGTCA-CCCTCTCTGAGGCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91319063 41 + 91754291 GATTGTCCCCAGCACCTTTCCTGTCA-CCCTCTCTGAGGCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1364613 41 + 1977891 GATTGTCCCCAGCACCTTTCCTGTCA-CCCTCTCTGAGGCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7320281 41 - 7796314 GATTGTCCCCAGCACCTTTCCTGTCA-CCCTCTCTGAGGCCT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17245606 35 - 17725628 CATGGTCC------CCTTTTCTCCCA-CCCTCTCTCCGGTCC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 154316 41 + 608964 GACTACCGCCAGCTGCTCTCCTCCCG-CTGTCTCTGGAGTCC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2290986 41 - 31377067 -ACCTGAAACGGGAAGTGTTATACCAGTTAGCTCAATAGGCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2662215 41 - 6579706 GATTTCCCCTAGCGCCATCTCTCCCT-CGGCCTCTGGGGCCG i dasNov3.JH569502 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6331947 420 + 6778120 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=515539.000000 s hg38.chr3_KI270934v1_alt 5794 101 + 163458 CCAC-TGCAGGGAGACCGACAGGACAGTCAAGCCCAACTTCTCCCAGTGCCTCTCCTCAGGAGACAGCCGCCATTTCCCGG------ATGGCCCAGACTCAGAGGACA s panTro5.chr3 2467141 101 - 202621043 TCAC-TGCAGGGAGACCGAAAGGACAGTCAAGCCCAACTTCTCCCAGCGCCTCTCCTCAGGAGACAGCCGCCATTTCCCGG------ATGGCCCAGACTCAGAGGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79465 101 - 190779 TCAC-TGCAGGGAGACCGAAAGGACAGTCAAGCCCAACTTCTCCCAGCGCCTCTCCTCAGGAGACAGCCGCCATTTCCCGG------ATGGCCCAGACTCAGAGGACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 188867 101 + 189199 CCAC-TGCAGGGAGACTGACAGGACAGTCAAGCCCAACTTCTCCCAGCGCCTCTCCTCAGGAGACAGCCGCCATTTCCCGG------ATGGCCCAGACTCAGGGGACA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19103979 101 - 19675229 CCAC-TGCAGGGAGACCAACAGGACAGTCAAGCCCAACTTCTCCCAGTGCCTCTCCTCAGGAGACGGCCGCCATTTCCTGG------ATGGCGCAGACTGAGAAGACA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16340433 101 - 16847902 CCAC-TGCAGGGAGACCGACAGGACAGTCAAGCCCAACTTCTCCCAGTGCCTCTCCTCAGGAGACGGCCGCCATTTCCCGG------ATAGCGCAGACTCAGAGGACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91319104 101 + 91754291 CCAC-TGCAGGGAGACCGACAGGACACTCAAGCCCAACTTCTCCCAGTGCCTCTCCTCAGGAGACGGCTGCCATTTCCCAG------ATGGCGCAGACTCAGAGGACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1364654 101 + 1977891 CCAC-TGCAGGGAGACCGACAGGACAGTCAAGCCCAACTTCTCCCAGTGCCTCTCCTCAGGAGACGGCCGCCATTTCCCGG------ATGGCGCAGACTCAGAGGACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7320322 101 - 7796314 CCAC-TGCAGGGAGACCGACTGGACAGTCAAGCCCAACTTCTCCCAGCGCCTCTCCTCAGGAGACAGCTGCCATTTCCCGG------ATGGCGCAGACTCAGAGGACA i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17245641 80 - 17725628 CCAC-CGCAGGGAGACCCCCAGGAGAGGCCAGCCTCACCTCTCCCAGCC---------------------CAGTCTCCTGG------GCGGTGCAGACTCGGGGGACA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6332367 101 + 6778120 CCAC-CGCAGGGGCACCGCCAGGACAGGCCGGCCCCACCTCCCCCAGCCCCTCTCCTCGGGAGACGTCCGCCGTTTCCCAG------GTGGCGCGGACTCAGGGGACA i cebCap1.NW_016107444v1 I 420 I 1646 s otoGar3.GL873829 154357 101 + 608964 -CACACACAGGGAGATCAACAGGACAGTCAACCGCAACTGCTCCCAGCACCATTCCTCAGGAAACATCAGCCACTGCACAG------ATGTCCCACACTCAGACCACA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2291027 101 - 31377067 CAAT-GACAAGCGGACCAGGGGGACACTCAACAGCACACTCTTCCCTGACTTCTACTCCAGAGAAAACAGCATCATCTCAGGGTCACATGACCCAGACCATG------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2662256 101 - 6579706 CAAC-TACTGGGCGGCCAGCAGCACAGTCAGTCTCAACGTCTCTCAGCACCTCTTCTCAGGACCCCTCACCCACTTCCCAC------ATGGCTCAGACTCAAGGTCCA i dasNov3.JH569502 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=632101.000000 s hg38.chr3_KI270934v1_alt 5895 143 + 163458 AGAACCAGCAGAGGGTCTGACACTATCAGCCTGGCGTCCCAGGCAACCGACACCTTCTCAACAGTCCCACCCACACCTCCATCGATCACATCCACTGGGCTTACATCTCCACAAACCGAGACCCACACTCTGTCACCTTCAGG s panTro5.chr3 2467242 143 - 202621043 GGAACCAGCAGAGGGTCTGACACCATCAGCCTGGCGTCCCAGGCGAACGACACCTTCTCAACAGTCAAACCCACACCTCCTTCGATCATATCCAGTGGGCTTACATCTCCACAAACCGAGACCCACACTCTGTCACCTTCAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79566 143 - 190779 GGAACCAGCAGAGGGTCTGACACCATCAGCCTGGCGTCCCAGGCGAACGACACCTTCTCAACAGTCACACCCACACCTCCTTCGATCATATCCAGTGGGCTTACATCTCCACAAACCGAGACCCACACTCTGTCACCTTCAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 188968 143 + 189199 GCAACCAGCAGAGGGTCTGACACCATCGGCCTGGCGTCCCAGGCGACCGACACCTTCTCAACAGTCACACCCACACCTCCTTCGATCACATTCAGGGGGATTACATCTCCACAAACCGAGACCCACACTCTGTCACCTTCAGG i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19104080 143 - 19675229 GGAACCAGCAGAGGGTCTGACACCATCAGCCTGGTGTCCCAGGCGACTGACACTTTCTCAACAGTCACACCCACACCTCCTTCGATCACATCCAGTGGGCTCACATTTCCACAAACCGAGACCCACACTCTGTCACCTTCAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16340534 143 - 16847902 GGAACCAGCAGAGGGTCTGACACCATCAGCCTGGTGTCCCAGGCGACTGACACTTTCTCAACAGTCACACCCACACCTCCTTCGATCACATCCAGTGGGCTCACATTTCCACAAACCGAGACCCACACTCTGTCACCTTCAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91319205 143 + 91754291 GGAACCAGCAGAGGGTCTGACACCATCAGCCTGGTGTCCCAGGTGACCGACACTTTCTCAACAGTCACACCCACACCTCCTTCGATCACATCCAGTGGGCTCACATTTCCACAAACCGAGACCCACGCTCTGTCACCTTCAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1364755 143 + 1977891 GGAACCAGCAGAGGGTCTGACACCATCAGCCTGGTGTCCCAGGCGACTGACACTTTCTCAACAGTCACACCCACACCTCCTTCGATCACATCCAGTGGGCTCACATTTCCACAAACCGAGACCCACACTCTGTCACCTTCAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7320423 143 - 7796314 GGAACCAGCAGAGGGTCTGACACCATCAGCCTGGTGTCCCAGGCGACCGACACTTTCTCAACAGTCACACCCACACCTCCTTCGATCACATCCAGTGGGCTCACATCTCCACAAACCGAGACCCACACTCTGTCACCTTCAGG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17245721 122 - 17725628 GGAGACGGCCGCGG---------------------TTCCCCGGCGACCCCCGGCTCCTCCACGCCCACAGCCGTGCCTCCACGGTTCGCATTCAGTGGGCAGACATCGCCACAGCCCGAGGCCCGCACTGGGTCCCCTTCATG i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 154458 143 + 608964 GGAACCACCGGAGCATCTGAAACCATGAGCTTGGTGTCCCGGGTGACTGACACCTTCCCAACAGTCACATCCCCACATCCTTCATCCACACCAAATGGGCACACAACTCCACAAACAGAGGCCCACACTCTGTCAACTTCAGG i otoGar3.GL873829 C 0 M 19127 s canFam3.chr33 2291128 89 - 31377067 GAGACCAGCACAGAGTCTGCAACCAGCA-----GTGTCTCAG----------------CGATGATCACATCCAC---TCCCTCATCCTCCCGAAGTGAACACACACCTACAGA------------------------------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2662357 143 - 6579706 CCAACCAGCAGTGGCCGCGAAATCATCAGTTCAGTCTCCCCGGTGACTGACAGCGCCTTCCCGGGCACATCCCCACCTCCTCCTTCCACACCAGGCGGACACACCACTCCACAAGCCGGGGCACACACTCTGTCAGTGTCAAG i dasNov3.JH569502 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=126349.000000 s hg38.chr3_KI270934v1_alt 6038 37 + 163458 GTCTGGTAAAACCTTCACCACGGCCCT--------CATCAGCAAC s panTro5.chr3 2467385 37 - 202621043 GTCTGGGAAAACCTTCATCACGGCCCT--------CATCAGCAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79709 37 - 190779 GTCTGGGAAAACCTTCATCACGGCCCT--------CATCAGCAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 189111 37 + 189199 GTCTGGTAAAACCTTCATCACGGCCCT--------CATCAGCAAC i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 19104223 37 - 19675229 GTCCGGTACAACCTTCAACATGGCCCT--------TGTCAGCAAC i macNem1.NW_012014355v1 C 0 I 620 s cerAty1.NW_012004056v1 16340677 37 - 16847902 GTCTGGTACAACCTTCAACATGGCCCT--------CGTCAGCAAC i cerAty1.NW_012004056v1 C 0 I 620 s chlSab2.chr15 91319348 37 + 91754291 GTCTGGTACAACCTTCAACATGGCCCT--------CATCAGCAAC i chlSab2.chr15 C 0 I 620 s manLeu1.NW_012102020v1 1364898 37 + 1977891 GTCTGGTACAACCTTCAACATGGCCCT--------CGTCAGCAAC i manLeu1.NW_012102020v1 C 0 I 620 s colAng1.NW_012118932v1 7320566 37 - 7796314 GTCCGGTACGACCTTCATCATGGCCCT--------CGTCAGCAAC i colAng1.NW_012118932v1 C 0 I 620 s saiBol1.JH378146 17245843 37 - 17725628 GTCCCGCAGAACCCTCAGCACGGCCCT--------CGTGGGCGAC i saiBol1.JH378146 C 0 I 582 s canFam3.chr33 2291217 42 - 31377067 ---TGACTCGACCCAGGACATGGCCTTGTCTGACACACCAAGTAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2662500 37 - 6579706 CCCCATCGGAACACTTAGCTCAAGCCC--------AGCCAGCGAC i dasNov3.JH569502 C 0 I 1 e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=5600.000000 s hg38.chr3_KI270934v1_alt 6075 14 + 163458 GCCACCCCTCTTCC----------- s panTro5.chr3 2467422 14 - 202621043 ATCACCCCTCTTCC----------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79746 14 - 190779 ATCACCCCTCTTCC----------- i panPan2.chrUn_NW_014024201v1 C 0 I 288 s gorGor5.CYUI01000254v1 189148 14 + 189199 ACCACCCCTCTTCC----------- i gorGor5.CYUI01000254v1 C 0 C 0 s canFam3.chr33 2291259 14 - 31377067 TTCATCCCTTTCCA----------- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2662538 25 - 6579706 GCCACCGGTCCCAGACGGCAACGAC i dasNov3.JH569502 I 1 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17245880 582 - 17725628 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=11486.000000 s hg38.chr3_KI270934v1_alt 6089 21 + 163458 TGTCACCTACGCTTCCTCGGC s panTro5.chr3 2467436 21 - 202621043 TGTCACCAGCCCTTCCTCAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80048 21 - 190779 TGTCACCGACGCTTCCTCACC i panPan2.chrUn_NW_014024201v1 I 288 C 0 s gorGor5.CYUI01000254v1 189162 21 + 189199 TGTCACTGACGCTTCCTCAGT i gorGor5.CYUI01000254v1 C 0 C 0 s canFam3.chr33 2291274 21 - 31377067 TGTCAGCCACACACCTTCCGC i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2662563 21 - 6579706 AGTCACCTGGGCCACTGGGGC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17245880 582 - 17725628 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=6536.000000 s hg38.chr3_KI270934v1_alt 6110 13 + 163458 -ATCCACAGG-----TCAC s panTro5.chr3 2467457 13 - 202621043 -ATCCACAGG-----TCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80069 13 - 190779 -ATCCACAGG-----TCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 189183 13 + 189199 -ATCCACAGG-----TCAC i gorGor5.CYUI01000254v1 C 0 N 0 s macFas5.chr2 192361670 13 - 192460366 -ATTCACAGG-----TCAC i macFas5.chr2 I 5347 C 0 s canFam3.chr33 2291295 18 - 31377067 -AGTGACAGAAATACCCAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2662584 12 - 6579706 AGCTGAAGGG-----AC-- i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17245880 582 - 17725628 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=4969.000000 s hg38.chr3_KI270934v1_alt 6123 22 + 163458 ACCACCCCTCTTCATGTCACCG s panTro5.chr3 2467470 22 - 202621043 GCCACCCCTCTTCCTGTCACCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80082 22 - 190779 GCCACCCCTCTTCCTGTCACGG i panPan2.chrUn_NW_014024201v1 C 0 T 356 s macFas5.chr2 192361683 22 - 192460366 GCTACCACTCTTCCTGTCACGG i macFas5.chr2 C 0 C 0 s canFam3.chr33 2291313 4 - 31377067 ACCA------------------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2662596 8 - 6579706 --------------AGCCGCGG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17245880 582 - 17725628 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=2246.000000 s hg38.chr3_KI270934v1_alt 6145 12 + 163458 ATGCTTCCTCAG s panTro5.chr3 2467492 12 - 202621043 GCCCTTCCTCAG i panTro5.chr3 C 0 C 0 s macFas5.chr2 192361705 12 - 192460366 GTGCTTTCTCAG i macFas5.chr2 C 0 T 48 s canFam3.chr33 2291317 4 - 31377067 --------TCAG i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2662604 10 - 6579706 --TCGGTTCCAG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17245880 582 - 17725628 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 80104 356 - 190779 T a score=-969.000000 s hg38.chr3_KI270934v1_alt 6157 2 + 163458 TA s panTro5.chr3 2467504 2 - 202621043 CA i panTro5.chr3 C 0 C 0 s macFas5.chr2 192361669 2 - 192460366 TA i macFas5.chr2 T 48 C 0 s canFam3.chr33 2291322 1 - 31377067 C- i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2662614 2 - 6579706 CA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17245880 582 - 17725628 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 80104 356 - 190779 T a score=8480.000000 s hg38.chr3_KI270934v1_alt 6159 14 + 163458 TCCACAGGTCACGC s panTro5.chr3 2467506 14 - 202621043 TCCACAGGTGACAC i panTro5.chr3 C 0 C 0 s macFas5.chr2 192361671 14 - 192460366 TTCACAGGTCACGC i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 17246462 14 - 17725628 TTCACAGGCCACGC i saiBol1.JH378146 I 582 C 0 s canFam3.chr33 2291323 14 - 31377067 TCCCCTGGGGACAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2662616 13 - 6579706 -CCCTGAGCGACCC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 80104 356 - 190779 T a score=27890.000000 s hg38.chr3_KI270934v1_alt 6173 41 + 163458 CACCCC----TCTTCCTGTC--ACCAGCCCTTCCTCAGT---ATC--CACAG s panTro5.chr3 2467520 41 - 202621043 CACCCC----TCTTCCTGTC--ACCAGCCCTTCCTCAGC---ATC--CACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79748 41 - 190779 CACCCC----TCTTCCTGTC--ACCAGCCCTTCCTCAGC---ATC--CACAG i panPan2.chrUn_NW_014024201v1 T 356 C 0 s macFas5.chr2 192361685 41 - 192460366 TACCAC----TCTTCCTGTC--ACGGGTGCTTTCTCAGC---ATC--CACAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246476 41 - 17725628 CACCCC----GCTTCCTGTG--ACCAGCACCTCCTCGGC---ATC--CACAG i saiBol1.JH378146 C 0 T 55 s canFam3.chr33 2291337 46 - 31377067 ---TTCAAGATCTTCCAGTGGAAGCAACACATCACCAAT---GACATCACAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2662629 35 - 6579706 GACCTC----TCGTTC--TC---------CTTCTTCAGTTTGGTC--CACAC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=11398.000000 s hg38.chr3_KI270934v1_alt 6214 41 + 163458 --------GTCACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGAA--- s panTro5.chr3 2467561 41 - 202621043 --------GTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGCA--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79789 40 - 190779 --------GTCACGCCACCCCTCTTCCTGTCACCAGC-CTTCCTCAGCA--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361678 41 - 192460366 --------GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCA--- i macFas5.chr2 T 48 C 0 s canFam3.chr33 2291383 39 - 31377067 --------GTCCCGACGACACTGATTGCATCA--GACACCCCAGCAGGA--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2662664 45 - 6579706 GTGGGGAAGTCCTCCCACCAA-------GCCCCAGATCCTCCGACATCAGTG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=6024.000000 s hg38.chr3_KI270934v1_alt 6255 7 + 163458 TCCACAG- s panTro5.chr3 2467602 7 - 202621043 TCCACAG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79829 7 - 190779 TCCACAG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361719 7 - 192460366 TCCACAG- i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246462 7 - 17725628 TTCACAG- i saiBol1.JH378146 T 55 C 0 s canFam3.chr33 2291422 7 - 31377067 ACCACGG- i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 2662709 5 - 6579706 ---ACAAG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=7211.000000 s hg38.chr3_KI270934v1_alt 6262 11 + 163458 GTCACGTCACC- s panTro5.chr3 2467609 11 - 202621043 GTCATGCCACC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79836 11 - 190779 GTGACACCACC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361678 11 - 192460366 GTCACGCTACC- i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 17246469 11 - 17725628 GCCACGCCACC- i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 2291431 11 - 31377067 CACACGTCACC- i canFam3.chr33 I 2 T 917 s dasNov3.JH569502 2662714 12 - 6579706 GTGACGGCCACG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=25064.000000 s hg38.chr3_KI270934v1_alt 6273 37 + 163458 CCTCTTCC------------TGTCACCAGCTTTTCCTCAGCATCCACAG s panTro5.chr3 2467620 37 - 202621043 CCTCTTCC------------TGTCACCGACGCTTCCTCAGCATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79847 37 - 190779 CCTCTTCC------------TGTCACCAGCCCTTCCTCAGCATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361689 37 - 192460366 ACTCTTCC------------TGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 s saiBol1.JH378146 17246480 37 - 17725628 CCGCTTCC------------TGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 C 0 T 55 s canFam3.chr33 2290525 49 - 31377067 TCACTACCGGAAATGGGAAGTGTTACCCACATCAGCTCAACAGGCCTAA i canFam3.chr33 T 917 I 16 s dasNov3.JH569502 2662726 37 - 6579706 GCCGTTCC------------TCCGGTCGGATCTGGCTCCGTCTCCTTGA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=3871.000000 s hg38.chr3_KI270934v1_alt 6310 38 + 163458 -GTGACAG-CAC-----CCCTCTTCCT----------------GTCACTGACACTTCCTCA s panTro5.chr3 2467657 38 - 202621043 -GTCATGC-CAC-----CGCTCTTCCT----------------GTCACCAGACCTTCCTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79884 38 - 190779 -GTGACAC-CAC-----CCCTCTTCCT----------------GTCACCGACGCTTCCTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s canFam3.chr33 2290590 60 - 31377067 -GGGACACTCACCAGCACACTCTTCCCTGACTTCTACTCCAGAGACAACAGAGTCATCTCA i canFam3.chr33 I 16 I 1 s dasNov3.JH569502 2662763 29 - 6579706 CGGGA-AC-CAC-----CCAGGTCCCG-------------------------GCTTCCTCG i dasNov3.JH569502 C 0 I 6 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=-445.000000 s hg38.chr3_KI270934v1_alt 6348 2 + 163458 GC s panTro5.chr3 2467695 2 - 202621043 GT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79922 2 - 190779 GC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2775564 2 - 123690457 gc i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 2290651 1 - 31377067 G- i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2662798 2 - 6579706 GT i dasNov3.JH569502 I 6 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I a score=700.000000 s hg38.chr3_KI270934v1_alt 6350 1 + 163458 A s panTro5.chr3 2467697 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79924 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2775566 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 56 C 0 s canFam3.chr33 2290652 1 - 31377067 G i canFam3.chr33 C 0 I 4 s dasNov3.JH569502 2662800 1 - 6579706 G i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=64427.000000 s hg38.chr3_KI270934v1_alt 6351 55 + 163458 TCCA--CAGGTCACG----TCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGCATCCACAG s panTro5.chr3 2467698 55 - 202621043 TCCA--CAGGTCACG----CCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79925 55 - 190779 TCCA--CAGGTCATG----CCACCCCTCTTCCTGTCACCAACGCTTCCTCAGCATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2775567 55 - 123690457 TCCA--CAGGTCACA----CCACCTCTCTTCCTGTCACCAGCACTTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCA--CAGGTCACG----CTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 s saiBol1.JH378146 17246462 55 - 17725628 TTCA--CAGGCCACG----CCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 T 55 T 55 s canFam3.chr33 2290657 54 - 31377067 TCCACCCAGGCCATGGAGATCAGCACAGAGTCTGCAACCAGCAGTGTCTCAGCG------- i canFam3.chr33 I 4 I 3 s dasNov3.JH569502 2662801 55 - 6579706 TTGA--GTGAGCCCA----CCACCAGACACCCTGTCACTGTCCAGTCAGGGGCTTccacca i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=12207.000000 s hg38.chr3_KI270934v1_alt 6406 40 + 163458 GTGACACCACCCCTCTTCCTGTCAC-------TGAC-ACTTCCTCAGC s panTro5.chr3 2467753 40 - 202621043 GTCACGCCACGGCTCTTCCCGTCAC-------CAGC-CCTTCCTCAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79980 41 - 190779 GTCATGACACCTCTCTTCCTGTCCC-------CGAAGCCTTCCTCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2775622 40 - 123690457 GTCACACCACCTCTCCTCCTGTCAC-------TGAC-ACATCCTCAGC i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 2290714 47 - 31377067 ATCACATCCTCTCCCTCATCCTCCCGAAGAGGAGAC-ACTCCTACAGA i canFam3.chr33 I 3 I 1 s dasNov3.JH569502 2662856 40 - 6579706 ccaacaccgcttccaccaccaacac-------cagt-acaccaccGAC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I a score=-1390.000000 s hg38.chr3_KI270934v1_alt 6446 1 + 163458 -A s panTro5.chr3 2467793 1 - 202621043 -A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80021 1 - 190779 -A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2775662 1 - 123690457 -A i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 -A i macFas5.chr2 T 56 C 0 s dasNov3.JH569502 2662896 1 - 6579706 C- i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290761 1 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=44822.000000 s hg38.chr3_KI270934v1_alt 6447 46 + 163458 TCCACAGGTCACGCCACCTCTCTTCCTGTCA---CCGA-----------CACTTCCTCAG s panTro5.chr3 2467794 46 - 202621043 TCCACAGGTCACGCCACCCCTCTTCCTGTCA---ACAG-----------CCCTTCCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80022 46 - 190779 TCCACAGGTCACGCCACCCCTCTTCCTGTCA---CCGA-----------CGCTTCCTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2775663 46 - 123690457 TCCACAGGTCACACCACCTCTCCTCCTGTCA---CCAG-----------CACTTCCTCAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361671 46 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCA---CGGG-----------TGCTTTCTCAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246462 46 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGA---CCAG-----------CACCTCCTCGG i saiBol1.JH378146 T 55 C 0 s canFam3.chr33 2290762 49 - 31377067 GGTACAACCCAGGACACAGCCATGTCTGGCACACCAAG-----------CACTTCATCGT i canFam3.chr33 I 1 I 1 s dasNov3.JH569502 2662897 52 - 6579706 TACATGAGCT---CTACCGGTGAGCCTCTCA---GCAGAGCTGCATCCTCACTTCCTC-- i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=-714.000000 s hg38.chr3_KI270934v1_alt 6493 2 + 163458 TA s panTro5.chr3 2467840 2 - 202621043 CA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80068 2 - 190779 CA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2775709 2 - 123690457 CA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361669 2 - 192460366 TA i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 17246508 2 - 17725628 CA i saiBol1.JH378146 C 0 T 48 s canFam3.chr33 2290812 1 - 31377067 T- i canFam3.chr33 I 1 C 0 e dasNov3.JH569502 2662949 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=58464.000000 s hg38.chr3_KI270934v1_alt 6495 55 + 163458 TCCACAGGTCACACCACCCCTCTTCCTGTCACCGA------CACTTCCTCAGCATCCACAG s panTro5.chr3 2467842 55 - 202621043 TCCACAGGTGACACCACCCCTCTTCCTGTCACCGA------TGCTTCCTCAGCATCCGCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80070 55 - 190779 TCCACAGGTCAGGCCACCCCTCTTCCTGTCACGGA------CACTTCCTCAGTATCCCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2775711 55 - 123690457 TCCACAGGTCACACCACCTCTCTTCCTGTCACTGA------CACGTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGG------TGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAG------CACCTCCTCGGCATCCACAG i saiBol1.JH378146 T 48 T 48 s canFam3.chr33 2290813 61 - 31377067 TCTACTATCAGCCACACACCTTCCGCAGTGACAGAAATACCCACACCATCAGCCTCCCCTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2662949 43 - 6579706 -TCTCAGAGGAGCCCACCGCCCTCCCCTCTACCGG------GACCACTCC----------- i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=38307.000000 s hg38.chr3_KI270934v1_alt 6550 39 + 163458 GTCACGCCACCTC-TCTTCC--TGTCACCGACACTTCCTCAG s panTro5.chr3 2467897 39 - 202621043 GTCATGCCACCCC-TCTTCC--TGTCACCAGCCCTTCCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80125 39 - 190779 GTGACACCACCTC-TCTTCC--TGTCACTAGCCCTTCCTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2775766 39 - 123690457 GTCACACCAGTTC-TCTTCC--TGCCACTGACACGTCCTCAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 39 - 192460366 GTCACGCTACCAC-TCTTCC--TGTCACGGGTGCTTTCTCAG i macFas5.chr2 T 48 T 48 s saiBol1.JH378146 17246469 39 - 17725628 GCCACGCCACCCC-GCTTCC--TGTGACCAGCACCTCCTCGG i saiBol1.JH378146 T 48 C 0 s canFam3.chr33 2290874 42 - 31377067 GTGACACCTCATCATCTTCCAGTGGAAGCAACACATCAGCAA i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 2662992 32 - 6579706 -------CATGAC-CCCTGC--CGACACCAGCACTTCACAAC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=13854.000000 s hg38.chr3_KI270934v1_alt 6589 9 + 163458 TATCCACAG s panTro5.chr3 2467936 9 - 202621043 TATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80164 9 - 190779 CATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2775805 9 - 123690457 CATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361669 9 - 192460366 TATTCACAG i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 17246508 9 - 17725628 CATCCACAG i saiBol1.JH378146 C 0 T 55 s canFam3.chr33 2290919 8 - 31377067 CAT-CACAG i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 2663024 9 - 6579706 CCACCACAA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=4029.000000 s hg38.chr3_KI270934v1_alt 6598 3 + 163458 GTC s panTro5.chr3 2467945 3 - 202621043 GTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80173 3 - 190779 GTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2775814 3 - 123690457 GTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 3 - 192460366 GTC i macFas5.chr2 C 0 C 0 s canFam3.chr33 2290927 3 - 31377067 GTC i canFam3.chr33 C 0 I 1063 s dasNov3.JH569502 2663033 3 - 6579706 GCC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=33021.000000 s hg38.chr3_KI270934v1_alt 6601 45 + 163458 ACACCACCCCTCTTCATGTCACTGATGCTTCCTCAGCATCC------------------ACAG--- s panTro5.chr3 2467948 45 - 202621043 ACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCC------------------ACAG--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80176 45 - 190779 ACACCACCCCTCTTCCTGTCACTGACGCTTCCTCAGCATCC------------------ACAG--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2775817 45 - 123690457 ACACCACCTCTCTTCCTGTCACCAGCGCTTCCTCAGCATCC------------------ACAG--- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361681 45 - 192460366 ACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCC------------------ACAG--- i macFas5.chr2 C 0 T 56 s dasNov3.JH569502 2663036 66 - 6579706 ACGCCTTCCCTCCCACGCCTACCTCTGCTACGTCGCCACCCCATGGGGCTGGCCCAGCAACAGCAT i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=12535.000000 s hg38.chr3_KI270934v1_alt 6646 40 + 163458 ---------GTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTC---------CTCAGT--- s panTro5.chr3 2467993 40 - 202621043 ---------GTCACGCCACCCCTATTCCAGTCACTGACGCTTC---------CTCAGT--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80221 40 - 190779 ---------GTCACGACACCTCTCTTCCTGTCACCGACATTTC---------CTCAGT--- i panPan2.chrUn_NW_014024201v1 C 0 T 96 s nomLeu3.chr11 2775862 40 - 123690457 ---------GTCACACCACCCCTCTTCCTGTCACCAGCACTTC---------CTCAGC--- i nomLeu3.chr11 C 0 C 0 s dasNov3.JH569502 2663102 61 - 6579706 TGGGGGCTAGCCCCACCAGCCCAGTCACCACCCAAGGCAATCCCGGGGACGTCTCACCTAC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I a score=17297.000000 s hg38.chr3_KI270934v1_alt 6686 48 + 163458 ATCCACAGGTGACACCACGCCTCTTCCTGTC---------ACTAGCCCTTC------CTCAGC--- s panTro5.chr3 2468033 48 - 202621043 ATCCACAGGTCAGGCCACCTCTCTTCCTGTC---------ACCAGCCCTTC------CTCAGC--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80165 48 - 190779 ATCCACAGGTGACACCACCCCTCTTCCTGTC---------ACTGACGCTTC------CTCAGC--- i panPan2.chrUn_NW_014024201v1 T 96 C 0 s nomLeu3.chr11 2775902 48 - 123690457 ATCCACAGGTCACACCACCCCTCTTCCTGTC---------AGTGACACTTC------CTCAGC--- i nomLeu3.chr11 C 0 C 0 s dasNov3.JH569502 2663163 66 - 6579706 AGGTACCAGTGGCACCGGCACCCCGGATGCCTCAACAAGTGCGGGCGCCACAAGGCGCTCAACACC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I a score=1365.000000 s hg38.chr3_KI270934v1_alt 6734 1 + 163458 A s panTro5.chr3 2468081 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80213 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2775950 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 56 C 0 s dasNov3.JH569502 2663229 1 - 6579706 A i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=58960.000000 s hg38.chr3_KI270934v1_alt 6735 55 + 163458 TCCACAGGTCACGCCACCCCTCTTCTT-----GTCACCGACACTTCCTCA------GCATCCACAG s panTro5.chr3 2468082 55 - 202621043 TCCACAGGTGACACCACCCCTCTTCCT-----GTCACTGACGCTTCCTCA------GCATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80214 55 - 190779 TCCACAGGTCACGACACCTCTCTTCCT-----GTCACCGACATTTCCTCA------GTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2775951 55 - 123690457 TCCACAGGTCACACCACCTCTCTTCCT-----GTCATCAGCACTTCCTCA------ACATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCACTCTTCCT-----GTCACGGGTGCTTTCTCA------GCATCCACAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCT-----GTGACCAGCACCTCCTCG------GCATCCACAG i saiBol1.JH378146 T 55 T 55 s dasNov3.JH569502 2663230 60 - 6579706 TCCTC------TGCCAGCCCTTCTCCTGCGGAGTCGTCGGCTGTTTCTGAGAGGGGGCACACTCAA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=36897.000000 s hg38.chr3_KI270934v1_alt 6790 47 + 163458 GACACGCCACCCCTCTTCCTGTCACCGAC-----------GCTTCCTCAGTGTCCACA s panTro5.chr3 2468137 47 - 202621043 GTGACACCACCCCTCTTGCTGTCACCGAC-----------GCTTCCTCAGCATCCACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80269 47 - 190779 GTCACGCCAACCCTCTTCCTGTCACCGAC-----------GCTTCCTCAGTATCCACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2776006 47 - 123690457 GTCACACCACCCCTCTTCCTGTCACTGAC-----------ACGTCCTCAGCATCCACA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 47 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGT-----------GCTTTCTCAGCATCCACA i macFas5.chr2 T 48 C 0 s dasNov3.JH569502 2663290 58 - 6579706 GGCGCACAGACCACCCTCGAGTCCCCGACCACGGCATCAGGCCTCCCCGGGACACACA i dasNov3.JH569502 C 0 I 180 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=1000.000000 s hg38.chr3_KI270934v1_alt 6837 1 + 163458 G s panTro5.chr3 2468184 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80316 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2776053 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361725 1 - 192460366 G i macFas5.chr2 C 0 T 56 e dasNov3.JH569502 2663348 180 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=16024.000000 s hg38.chr3_KI270934v1_alt 6838 40 + 163458 ATCACGCCACCTCTCTTCCTGTAACCATCCCTTCCGCAGC s panTro5.chr3 2468185 40 - 202621043 GTGACACTACCCCTCTTCCTGTCACCGACACTTCCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80317 40 - 190779 GTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2776054 40 - 123690457 GTCACACCACCTCTCCTCCTGTCACCAGCACTTCCTCAAC i nomLeu3.chr11 C 0 C 0 e dasNov3.JH569502 2663348 180 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I a score=910.000000 s hg38.chr3_KI270934v1_alt 6878 1 + 163458 A s panTro5.chr3 2468225 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80357 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2776094 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 56 C 0 e dasNov3.JH569502 2663348 180 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=61319.000000 s hg38.chr3_KI270934v1_alt 6879 55 + 163458 TCCACAGGTCACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAG s panTro5.chr3 2468226 55 - 202621043 TCCACAGGTGACACCACCTCTCTTCCTGTCACCGATGCTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80358 55 - 190779 TCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2776095 55 - 123690457 TCCACAGGTCACACCACCCCTCTTCCTGTCACTGACACGTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 T 55 T 55 e dasNov3.JH569502 2663348 180 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=10854.000000 s hg38.chr3_KI270934v1_alt 6934 24 + 163458 GTCAGGCCACCTCTCTTCTTGTCA s panTro5.chr3 2468281 24 - 202621043 GTCATGCCACCTCTCTTCCTGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80413 24 - 190779 GTGACACCACCCCTCTTCCTGTCA i panPan2.chrUn_NW_014024201v1 C 0 T 48 s nomLeu3.chr11 2776150 24 - 123690457 GTCACACCACCCCTCTTCCTGTCA i nomLeu3.chr11 C 0 C 0 e dasNov3.JH569502 2663348 180 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I a score=15437.000000 s hg38.chr3_KI270934v1_alt 6958 26 + 163458 CCGACACTTCCTCAGTATCCACAGGT s panTro5.chr3 2468305 26 - 202621043 CTGACACTTCCTCAGTATCCACAGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80389 26 - 190779 CCGACGCTTCCTCAGTATCCACAGGT i panPan2.chrUn_NW_014024201v1 T 48 C 0 s nomLeu3.chr11 2776174 26 - 123690457 CTGACACGTCCTCAGCATCCACAGGT i nomLeu3.chr11 C 0 M 3534 s dasNov3.JH569502 2663528 26 - 6579706 CTGACAGCACCCTGGGAACCTCAGGG i dasNov3.JH569502 I 180 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I a score=6189.000000 s hg38.chr3_KI270934v1_alt 6984 22 + 163458 GACAC------------------CACGCCTCTTCCTGTCA s panTro5.chr3 2468331 22 - 202621043 GACAC------------------CACCCCTCTTCCTGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80415 22 - 190779 GACAC------------------CACCCCTCTTCCTGTCA i panPan2.chrUn_NW_014024201v1 C 0 T 690 s dasNov3.JH569502 2663554 40 - 6579706 GACACGTCGTTTTCCCAAATGAGCACCCTGGGCCCCGTCA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=268.000000 s hg38.chr3_KI270934v1_alt 7006 30 + 163458 -----------CTAGCACT----TCCTCAG------------------CATCCACAGGTCACG s panTro5.chr3 2468353 30 - 202621043 -----------CCAGCCCT----TCCTCAG------------------CATCCACAGGTCACG i panTro5.chr3 C 0 C 0 s dasNov3.JH569502 2663594 57 - 6579706 CCTCTGGAGTCTCAGCACCGGGGTCCCCGGGCAGGCAATCAACATCGCCTTCCACCG------ i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M e panPan2.chrUn_NW_014024201v1 80437 690 - 190779 T a score=1351.000000 s hg38.chr3_KI270934v1_alt 7036 5 + 163458 TCACT s panTro5.chr3 2468383 5 - 202621043 TTACT i panTro5.chr3 C 0 I 96 s panPan2.chrUn_NW_014024201v1 79747 5 - 190779 TCACC i panPan2.chrUn_NW_014024201v1 T 690 C 0 s dasNov3.JH569502 2663651 5 - 6579706 GCACC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=4701.000000 s hg38.chr3_KI270934v1_alt 7041 29 + 163458 CCTCTTCATGTCAC--CAGCCCTTCCTCAGC------ s panTro5.chr3 2468484 29 - 202621043 TCTCTTCCTGTCAC--CGATGCTTCCACACC------ i panTro5.chr3 I 96 C 0 s panPan2.chrUn_NW_014024201v1 79752 29 - 190779 CCTCTTCCTGTCAC--CAGCCCTTCCTCAGC------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s dasNov3.JH569502 2663656 37 - 6579706 TCACCTGACGCCACAGCAGCCATTTCGCAGGCTCACC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=910.000000 s hg38.chr3_KI270934v1_alt 7070 1 + 163458 A s panTro5.chr3 2468513 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79781 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 56 C 0 s dasNov3.JH569502 2663693 1 - 6579706 A i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=36200.000000 s hg38.chr3_KI270934v1_alt 7071 55 + 163458 TCCACAGGTCACGCCACCC-------CTCTTCCTGTCACCAGC--------------CTTTCCTCA-GCATCCACAG s panTro5.chr3 2468514 55 - 202621043 TCCACAGGTCACGCCACCC-------CTCTTCCTGTCACTGAC--------------GCTTCCTCA-GCATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79782 54 - 190779 TCCACAGGTCACGCCACCC-------CTCTTCCTGTCACCAGC---------------CTTCCTCA-GCATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCA-------CTCTTCCTGTCACGGGT--------------GCTTTCTCA-GCATCCACAG i macFas5.chr2 C 0 T 57 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCC-------CGCTTCCTGTGACCAGC--------------ACCTCCTCG-GCATCCACAG i saiBol1.JH378146 T 55 T 55 s dasNov3.JH569502 2663694 77 - 6579706 AACTCAAGACACACGGACCTCTGGGGTTCCTCCTCACACCAGCAAAGCGGGCCTGAGGCTGACTGACACGACCGTGG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=17562.000000 s hg38.chr3_KI270934v1_alt 7126 87 + 163458 GTGACACCAT--GCCTCTTCCTGTCACTAGCCCTTCCTCAGCATCCA------------CAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAG s panTro5.chr3 2468569 87 - 202621043 GTCACGCCAC--CCCTCTTCCTGTCACCGACGCTTCCTCACCATCCA------------CAGGTCACGCCACCTTTCTTCCTGTCACCGACACTTCCCCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79836 87 - 190779 GTGACACCAC--CCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCA------------CAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s dasNov3.JH569502 2663771 90 - 6579706 TGGGCACCACTGCCACATCCACATCGCCA-----TCCACCGCAACCAGCCAAACCACTGCAGGAAGCGCTGCGCCGCAACCATTCCCCCCCGCTG------ i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=26747.000000 s hg38.chr3_KI270934v1_alt 7213 57 + 163458 TATCCACAG--GTCACACCACCCCTCTTCATGTCACTGATGCTTCCTCAGCATCCACAG s panTro5.chr3 2468656 57 - 202621043 TATCCACAG--GTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79923 57 - 190779 CATCCACAG--GTCATGCCACCCCTCTTCCTGTCACCAACGCTTCCTCAGCATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361669 57 - 192460366 TATTCACAG--GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 57 T 56 s dasNov3.JH569502 2663861 54 - 6579706 GGACCACAGCCTCTGCGCCAGCTCTC-TCCAGTCACGGCCA----CACAGCTCCCGCAA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=3586.000000 s hg38.chr3_KI270934v1_alt 7270 26 + 163458 GTCAGGCCACCCCTCTTCCTGTCACC-- s panTro5.chr3 2468713 26 - 202621043 GTGACACCACCTCTCTTCCTGTCACC-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79980 26 - 190779 GTCATGACACCTCTCTTCCTGTCCCC-- i panPan2.chrUn_NW_014024201v1 C 0 I 1 s dasNov3.JH569502 2663915 22 - 6579706 ------GCACTGCGTTGTCGGCCACAGC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=2463.000000 s hg38.chr3_KI270934v1_alt 7296 48 + 163458 ----------AGCCTTTCCTCAGTATCCACAGGTGACA---CCACGCCTCTTCCTGTCACT s panTro5.chr3 2468739 48 - 202621043 ----------AGCCCTTCCTCAGCATCCCCAGGTCACG---CCACCCCTCTTCCTGTCACC i panTro5.chr3 C 0 C 0 s dasNov3.JH569502 2663937 61 - 6579706 AAGCGCGCCGGACACTACCCACGCAACCGGGAGACACGCGTCTGTGATCTCCCCTAGCACC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M e panPan2.chrUn_NW_014024201v1 80006 1 - 190779 I a score=3432.000000 s hg38.chr3_KI270934v1_alt 7344 14 + 163458 AGCCCTTCCTCAGC s panTro5.chr3 2468787 14 - 202621043 GACGCTTCCTCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80007 14 - 190779 AAGCCTTCCTCAGT i panPan2.chrUn_NW_014024201v1 I 1 C 0 s dasNov3.JH569502 2663998 14 - 6579706 ATCTCTCCCTCGGC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=-1294.000000 s hg38.chr3_KI270934v1_alt 7358 1 + 163458 -A s panTro5.chr3 2468801 1 - 202621043 -A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80021 1 - 190779 -A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 -A i macFas5.chr2 T 56 C 0 s dasNov3.JH569502 2664012 1 - 6579706 C- i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=37801.000000 s hg38.chr3_KI270934v1_alt 7359 55 + 163458 TCCACAGGTCACGCCACCCCTCTTCTTGTCACCGACAC--------------TTCCTCAGCATC----CACAG s panTro5.chr3 2468802 55 - 202621043 TCCACAGGTCACGCCACCTCTCTTCCTGTCACCGACAC--------------TTCCTCAGTATC----CACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80022 55 - 190779 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACGC--------------TTCCTCACCATC----CACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGC--------------TTTCTCAGCATC----CACAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCAC--------------CTCCTCGGCATC----CACAG i saiBol1.JH378146 T 55 T 55 s dasNov3.JH569502 2664013 69 - 6579706 -TCTGGGGCCGCAACAACTGG---GCGGCCAGCAGCACAGTCAGTCTCAACTTCTCTCAGCACCTCTTCTCAG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=18292.000000 s hg38.chr3_KI270934v1_alt 7414 48 + 163458 GACACGCCACCCCTCTTCC---TGTCACCGACGC-----------TTCCTCAGTGTCCACAG s panTro5.chr3 2468857 48 - 202621043 GTCACGCCACCCCTCTTCC---TGTCACCGACAC-----------TTCCTCACTATCTACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80077 48 - 190779 GTCAGGCCACCCCTCTTCC---TGTCACGGACAC-----------TTCCTCAGTATCCCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 GTCACGCTACCACTCTTCC---TGTCACGGGTGC-----------TTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 56 s dasNov3.JH569502 2664082 62 - 6579706 GACCCCTCACCTACTTCCCACATGGCTCAGACTCAAGGGCCAGCAACCAGCAGTGACCACGA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=4881.000000 s hg38.chr3_KI270934v1_alt 7462 26 + 163458 ATCACGCCACCTC--TCTTCCT-GTAACC---- s panTro5.chr3 2468905 26 - 202621043 GTGACACCACCTC--TCTTCCT-GTCACC---- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80125 26 - 190779 GTGACACCACCTC--TCTTCCT-GTCACT---- i panPan2.chrUn_NW_014024201v1 C 0 T 144 s dasNov3.JH569502 2664144 32 - 6579706 -AACCATCACTTCAGTCTCCCTGGTGACTGACA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=1285.000000 s hg38.chr3_KI270934v1_alt 7488 14 + 163458 ATCCCTTCCGCAGC s panTro5.chr3 2468931 14 - 202621043 GACGCTTCCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80007 14 - 190779 AAGCCTTCCTCAGT i panPan2.chrUn_NW_014024201v1 T 144 C 0 s dasNov3.JH569502 2664176 9 - 6579706 GCGCCTTCC----- i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=546.000000 s hg38.chr3_KI270934v1_alt 7502 1 + 163458 A s panTro5.chr3 2468945 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80021 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 56 C 0 e dasNov3.JH569502 2664185 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=39290.000000 s hg38.chr3_KI270934v1_alt 7503 55 + 163458 TCCACAGGTCACACCACC-CCTCTTCCTGTCAC-CGACACTTCCTCAGCA-TCCACAG s panTro5.chr3 2468946 55 - 202621043 TCCACAGGTCACACCACC-TCTCTCCCTGTCAC-CAGCCCTTCCTCAGTA-TCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80022 55 - 190779 TCCACAGGTCACGCCACC-CCTCTTCCTGTCAC-CGACGCTTCCTCACCA-TCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACC-ACTCTTCCTGTCAC-GGGTGCTTTCTCAGCA-TCCACAG i macFas5.chr2 C 0 T 56 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACC-CCGCTTCCTGTGAC-CAGCACCTCCTCGGCA-TCCACAG i saiBol1.JH378146 T 55 T 55 s dasNov3.JH569502 2664185 53 - 6579706 -----CGGGCACATCCCCACCTCCTCCTTCCATACCAGGCGGACACACCACTCCACAA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=7204.000000 s hg38.chr3_KI270934v1_alt 7558 30 + 163458 GTCAGGCCACCTCTCTTCTTGTCACCGACA s panTro5.chr3 2469001 30 - 202621043 GTCACGTCACTCATCTTCCTGTCACTGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80077 30 - 190779 GTCAGGCCACCCCTCTTCCTGTCACGGACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s dasNov3.JH569502 2664238 27 - 6579706 GCCGGGACACACA---CTCTGTCAGCGTCA i dasNov3.JH569502 C 0 I 107 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=7639.000000 s hg38.chr3_KI270934v1_alt 7588 28 + 163458 CTTCCTCAGTATCCACAGGTGACACCAC s panTro5.chr3 2469031 28 - 202621043 CTTCCTCAGTATCCACAGGTGACACCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80107 28 - 190779 CTTCCTCAGTATCCCCAGGTGACACCAC i panPan2.chrUn_NW_014024201v1 C 0 I 144 e dasNov3.JH569502 2664265 107 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=10287.000000 s hg38.chr3_KI270934v1_alt 7616 44 + 163458 GCCTCTTCCTGTCACTAGCACTTCCTCAGCATCCACAGGTCACG s panTro5.chr3 2469059 44 - 202621043 CTCTCTTCCTGTCACCGACGCTTCCTCACCATCCACAGGTCACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80279 44 - 190779 CCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTCACG i panPan2.chrUn_NW_014024201v1 I 144 T 576 e dasNov3.JH569502 2664265 107 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=4643.000000 s hg38.chr3_KI270934v1_alt 7660 24 + 163458 TCACTCCTCTTCATGTCACCAGCC s panTro5.chr3 2469103 24 - 202621043 ACACCTCTCTTCCTGTCACCGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79747 24 - 190779 TCACCCCTCTTCCTGTCACCAGCC i panPan2.chrUn_NW_014024201v1 T 576 C 0 e dasNov3.JH569502 2664265 107 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=2616.000000 s hg38.chr3_KI270934v1_alt 7684 10 + 163458 CTTCCTCAGC s panTro5.chr3 2469127 10 - 202621043 TTTCCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79771 10 - 190779 CTTCCTCAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s dasNov3.JH569502 2664372 10 - 6579706 CGGTTCCAGC i dasNov3.JH569502 I 107 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=910.000000 s hg38.chr3_KI270934v1_alt 7694 1 + 163458 A s panTro5.chr3 2469137 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79781 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 56 C 0 s dasNov3.JH569502 2664382 1 - 6579706 A i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=42154.000000 s hg38.chr3_KI270934v1_alt 7695 55 + 163458 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGC---ATCCACAG s panTro5.chr3 2469138 55 - 202621043 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCAGT---GTCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79782 54 - 190779 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGC-CTTCCTCAGC---ATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGC---ATCCACAG i macFas5.chr2 C 0 T 57 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGC---ATCCACAG i saiBol1.JH378146 T 55 T 55 s dasNov3.JH569502 2664383 48 - 6579706 -CCCTGAGCGACACGACCTCTCGTTCTC---------CTTCTTCAGTTTGGTCCACAC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=1670.000000 s hg38.chr3_KI270934v1_alt 7750 10 + 163458 GTGACACCAT s panTro5.chr3 2469193 10 - 202621043 GTGACACCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79836 10 - 190779 GTGACACCAC i panPan2.chrUn_NW_014024201v1 C 0 I 289 s dasNov3.JH569502 2664431 4 - 6579706 GTGG------ i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=18920.000000 s hg38.chr3_KI270934v1_alt 7760 77 + 163458 GCCTCTTCCTGTCACTAGCC----CTTCCTCAGCATCCAC----AGGTGAC-ACCACCCCTCTTCCTGTCACCGACGCTTCCTCAG s panTro5.chr3 2469203 77 - 202621043 CCCTCTTCCTGTCACGAGCC----CTTCCTCAGCATCCAC----AGGTGAC-GCCACCGCTCTTACTGTCACCAGCCCTTCCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80135 77 - 190779 CTCTCTTCCTGTCACTAGCC----CTTCCTCAGCATCCAC----AGGTGAC-ACCACCCCTCTTCCTGTCACTGACGCTTCCTCAG i panPan2.chrUn_NW_014024201v1 I 289 C 0 s dasNov3.JH569502 2664435 86 - 6579706 GGAAGTTCTCGCAGCAAGCCCCAGCTCCTCCGACATCAGTGACAAGGTGACGGCCACGGCCGTTCCTCCGGTCGGATCTGGCTCCG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=512.000000 s hg38.chr3_KI270934v1_alt 7837 2 + 163458 TA s panTro5.chr3 2469280 2 - 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80212 2 - 190779 CA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361669 2 - 192460366 TA i macFas5.chr2 T 57 C 0 s dasNov3.JH569502 2664521 2 - 6579706 TC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=14599.000000 s hg38.chr3_KI270934v1_alt 7839 18 + 163458 ---TCCACAGGTCACACCACC s panTro5.chr3 2469282 18 - 202621043 ---TCCACAGGTCACGCCACC i panTro5.chr3 C 0 T 912 s panPan2.chrUn_NW_014024201v1 80214 18 - 190779 ---TCCACAGGTCACGACACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 18 - 192460366 ---TTCACAGGTCACGCTACC i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 17246462 18 - 17725628 ---TTCACAGGCCACGCCACC i saiBol1.JH378146 T 55 C 0 s dasNov3.JH569502 2664523 18 - 6579706 TCCTTGACGGG---AACCACC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=20047.000000 s hg38.chr3_KI270934v1_alt 7857 37 + 163458 CCTCTTCCTGTCACCAGCCCTTCCTC----AGCATCTACAG-- s panTro5.chr3 2468388 37 - 202621043 CCTCTTCCTGTCACTGACACTTCCTC----AGTATCCACAG-- i panTro5.chr3 T 912 C 0 s panPan2.chrUn_NW_014024201v1 80232 37 - 190779 TCTCTTCCTGTCACCGACATTTCCTC----AGTATCCACAG-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361689 37 - 192460366 ACTCTTCCTGTCACGGGTGCTTTCTC----AGCATCCACAG-- i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246480 37 - 17725628 CCGCTTCCTGTGACCAGCACCTCCTC----GGCATCCACAG-- i saiBol1.JH378146 C 0 T 55 s dasNov3.JH569502 2664541 34 - 6579706 -CAGGTCCCG--------GCTTCCTCGCCGGGCGTGTCGAGCA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=22442.000000 s hg38.chr3_KI270934v1_alt 7894 48 + 163458 GTCACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGCATCCAAAG s panTro5.chr3 2468425 48 - 202621043 GTGACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80269 48 - 190779 GTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 56 s dasNov3.JH569502 2664575 48 - 6579706 AGCCCACCACCAGACACCCTGTCATGGTCCAGTCAGGGGCTTCCACCA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=6832.000000 s hg38.chr3_KI270934v1_alt 7942 40 + 163458 --------GTGACACCACCCCTCTTCCTGTCACCAGCCCTTCC--TCAGC s panTro5.chr3 2468473 40 - 202621043 --------GTCACGCCACCTCTCTTCCTGTCACCGATGCTTCC--ACACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80317 40 - 190779 --------GTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCC--TCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s dasNov3.JH569502 2664623 45 - 6579706 CCAACACCAGTACACCACCGACCTATGTG-----AGCTCTACCGGTGAGC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=-1294.000000 s hg38.chr3_KI270934v1_alt 7982 1 + 163458 -A s panTro5.chr3 2468513 1 - 202621043 -A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80357 1 - 190779 -A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 -A i macFas5.chr2 T 56 C 0 s dasNov3.JH569502 2664668 1 - 6579706 C- i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=41153.000000 s hg38.chr3_KI270934v1_alt 7983 55 + 163458 --TCTACAGGTCACACCACCCCTCTTCCTGTCACCGA------CACTTCCTCAGCATCCACAG s panTro5.chr3 2468514 55 - 202621043 --TCCACAGGTCACGCCACCCCTCTTCCTGTCACTGA------CGCTTCCTCAGCATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80358 55 - 190779 --TCCACAGGTGACACCACCCCTCTTCCTGTCACCGA------CGCTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 --TTCACAGGTCACGCTACCACTCTTCCTGTCACGGG------TGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 57 s saiBol1.JH378146 17246462 55 - 17725628 --TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAG------CACCTCCTCGGCATCCACAG i saiBol1.JH378146 T 55 T 55 s dasNov3.JH569502 2664669 62 - 6579706 TCTCAGCAGAGC-TGCATCCTCACTTCCTCTCTCAGAGGAGCCCACCGCCCTCCCCTCCACCG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=9650.000000 s hg38.chr3_KI270934v1_alt 8038 38 + 163458 GTGACACCACCC------CTCTTCCTGTCACCAATGCTTCCTCA s panTro5.chr3 2468569 38 - 202621043 GTCACGCCACCC------CTCTTCCTGTCACCGACGCTTCCTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80413 38 - 190779 GTGACACCACCC------CTCTTCCTGTCAGCAGTGCTACCTCA i panPan2.chrUn_NW_014024201v1 C 0 T 691 s dasNov3.JH569502 2664731 41 - 6579706 ---GGACCACTCCCATGACCCCTGCCGACACCAGCACTTCACAA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=38.000000 s hg38.chr3_KI270934v1_alt 8076 1 + 163458 T s panTro5.chr3 2468607 1 - 202621043 C i panTro5.chr3 C 0 C 0 s dasNov3.JH569502 2664772 1 - 6579706 C i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M e panPan2.chrUn_NW_014024201v1 80451 691 - 190779 T a score=-1040.000000 s hg38.chr3_KI270934v1_alt 8077 2 + 163458 -TA s panTro5.chr3 2468608 2 - 202621043 -CA i panTro5.chr3 C 0 C 0 s macFas5.chr2 192361669 2 - 192460366 -TA i macFas5.chr2 T 57 C 0 s dasNov3.JH569502 2664773 2 - 6579706 CC- i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M e panPan2.chrUn_NW_014024201v1 80451 691 - 190779 T a score=13536.000000 s hg38.chr3_KI270934v1_alt 8079 26 + 163458 TCCACAGGTCACGCCACCCCTCTTCA s panTro5.chr3 2468610 26 - 202621043 TCCACAGGTCACGCCACCTTTCTTCC i panTro5.chr3 C 0 C 0 s macFas5.chr2 192361671 26 - 192460366 TTCACAGGTCACGCTACCACTCTTCC i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 17246462 26 - 17725628 TTCACAGGCCACGCCACCCCGCTTCC i saiBol1.JH378146 T 55 C 0 s dasNov3.JH569502 2664775 22 - 6579706 ACCACAAGCCACGCCTTCCCTC---- i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M e panPan2.chrUn_NW_014024201v1 80451 691 - 190779 T a score=13658.000000 s hg38.chr3_KI270934v1_alt 8105 21 + 163458 TGTCACCAGCCCTTCCTCAGC s panTro5.chr3 2468636 21 - 202621043 TGTCACCGACACTTCCCCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79760 21 - 190779 TGTCACCAGCCCTTCCTCAGC i panPan2.chrUn_NW_014024201v1 T 691 C 0 s macFas5.chr2 192361697 21 - 192460366 TGTCACGGGTGCTTTCTCAGC i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246488 21 - 17725628 TGTGACCAGCACCTCCTCGGC i saiBol1.JH378146 C 0 C 0 s dasNov3.JH569502 2664797 16 - 6579706 -----CCACGCCTACCTCTGC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=910.000000 s hg38.chr3_KI270934v1_alt 8126 1 + 163458 A s panTro5.chr3 2468657 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79781 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 17246509 1 - 17725628 A i saiBol1.JH378146 C 0 T 48 e dasNov3.JH569502 2664813 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=26100.000000 s hg38.chr3_KI270934v1_alt 8127 36 + 163458 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGC s panTro5.chr3 2468658 36 - 202621043 TCCACAGGTGACACCACCCCTCTTCCTGTCACCGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79782 36 - 190779 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGC i panPan2.chrUn_NW_014024201v1 C 0 I 528 s macFas5.chr2 192361671 36 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGGT i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 17246462 36 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGC i saiBol1.JH378146 T 48 C 0 s dasNov3.JH569502 2664813 25 - 6579706 ---------TACGTCGCCACCC--CATGGGGCTGGC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=11430.000000 s hg38.chr3_KI270934v1_alt 8163 17 + 163458 ACTTCCTCAGCAT------------CCAC s panTro5.chr3 2468694 17 - 202621043 GCTTCCTCAGTAT------------CCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80346 17 - 190779 CCTTCCTCAGTAT------------CCAC i panPan2.chrUn_NW_014024201v1 I 528 C 0 s macFas5.chr2 192361707 17 - 192460366 GCTTTCTCAGCAT------------CCAC i macFas5.chr2 C 0 T 54 s saiBol1.JH378146 17246498 17 - 17725628 ACCTCCTCGGCAT------------CCAC i saiBol1.JH378146 C 0 T 53 s dasNov3.JH569502 2664838 29 - 6579706 CCAGCAACAGCATTGGGGGCTAGCCCCAC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=4379.000000 s hg38.chr3_KI270934v1_alt 8180 29 + 163458 -CGGTCA--CGCCACCC----CTCTTCCTGTCACCG s panTro5.chr3 2468711 29 - 202621043 -AGGTGA--CACCACCT----CTCTTCCTGTCACCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80363 29 - 190779 -AGGTGA--CACCACCC----CTCTTCCTGTCACCG i panPan2.chrUn_NW_014024201v1 C 0 T 383 s dasNov3.JH569502 2664867 35 - 6579706 CAGCCCAGTCACCACCCAAGGCAATCCCGGGGACG- i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246515 53 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361724 54 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=30944.000000 s hg38.chr3_KI270934v1_alt 8209 157 + 163458 GCCTTTCCTCAGCTACCACAGATGACACCACCCGTCTTCCTGTCACCGACGTTTCCTCGGCATCCACAGGTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACGCCTCTTCCT-----GTCACTAGCCCTTCCTCAGC------ s panTro5.chr3 2468740 157 - 202621043 GCCCTTCCTCAGCATCCCCAGGTCACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCACCATCCACAGGTCACGCCACCTCTCTTCCTGTCACCGACACTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCT-----GTCACCGACACTTCCTCACT------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80009 156 - 190779 -GCCTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCACCATCCACAGGTCAGGCCACCCCTCTTCCTGTCACGGACACTTCCTCAGTATCCCCAGGTGACACCACCTCTCTTCCT-----GTCACTAGCCCTTCCTCAGC------ i panPan2.chrUn_NW_014024201v1 T 383 C 0 s dasNov3.JH569502 2664902 129 - 6579706 ------TCTCA---CCTACAGGT------ACCAGTGGCACCGGCACCCCGGATGCCTCAACAAGCGCGGG------------------CGCCACAAGGCGCTCAACACCATCCTC------TGCCAGCCCTTCTCCTGCGGAGTCGTCGGCTGTTTCTGAGAGGGGGC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246515 53 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361724 54 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=24268.000000 s hg38.chr3_KI270934v1_alt 8366 56 + 163458 ATCCACAGGTCACGCCAGCCCTCTTCTTGTCACTGAC-----------GCTTCCTCAGCATCCACAG- s panTro5.chr3 2468897 56 - 202621043 ATCTACAGGTGACACCACCTCTCTTCCTGTCACCGAC-----------GCTTCCTCAGTATCCACAG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80165 56 - 190779 ATCCACAGGTGACACCACCCCTCTTCCTGTCACTGAC-----------GCTTCCTCAGCATCCACAG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGT-----------GCTTTCTCAGCATCCACAG- i macFas5.chr2 T 54 T 48 s dasNov3.JH569502 2665031 68 - 6579706 ACACTCAAGGCGCACAGACCACCCTCGAGTCCCCGACCACGGCATCAGGCCTCCCCGGGACACAAATG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246515 53 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=17575.000000 s hg38.chr3_KI270934v1_alt 8422 48 + 163458 ---------GTCAGG-CCACCCCTCTTCCTGTCA---CCGACACTTCCTCAGTATCCACAG--- s panTro5.chr3 2468953 48 - 202621043 ---------GTCACA-CCACCTCTCTCCCTGTCA---CCAGCCCTTCCTCAGTATCCACAG--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80221 48 - 190779 ---------GTCACG-ACACCTCTCTTCCTGTCA---CCGACATTTCCTCAGTATCCACAG--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 ---------GTCACG-CTACCACTCTTCCTGTCA---CGGGTGCTTTCTCAGCATCCACAG--- i macFas5.chr2 T 48 T 76 s dasNov3.JH569502 2665099 64 - 6579706 GTCCGGTCCGACACGCCCACCACTCCTTCATCCAGCCCAAGTGCACACTCGGCCTCAGAAAGTG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246515 53 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=338.000000 s hg38.chr3_KI270934v1_alt 8470 13 + 163458 CTCACGC-----CACCCC---- s panTro5.chr3 2469001 13 - 202621043 GTCACGT-----CACTCA---- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80269 13 - 190779 GTCACGC-----CAACCC---- i panPan2.chrUn_NW_014024201v1 C 0 T 144 s dasNov3.JH569502 2665163 22 - 6579706 GTCGTGTGGATACAACCACCGC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246515 53 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 76 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=1908.000000 s hg38.chr3_KI270934v1_alt 8483 12 + 163458 ACTTCCTGTCAC s panTro5.chr3 2469014 12 - 202621043 TCTTCCTGTCAC i panTro5.chr3 C 0 I 900 s panPan2.chrUn_NW_014024201v1 80138 12 - 190779 TCTTCCTGTCAC i panPan2.chrUn_NW_014024201v1 T 144 C 0 s dasNov3.JH569502 2665185 12 - 6579706 GGGTTCAAGGAC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246515 53 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 76 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=3318.000000 s hg38.chr3_KI270934v1_alt 8495 36 + 163458 CGGCCTTTCTTCAGCTTCCACAGATG------ACACCACCCG s panPan2.chrUn_NW_014024201v1 80150 36 - 190779 TAGCCCTTCCTCAGCATCCACAGGTG------ACACCACCCC i panPan2.chrUn_NW_014024201v1 C 0 I 96 s dasNov3.JH569502 2665197 42 - 6579706 AGGCTTCAGCCCAACGCCCTCCGGGGAGAGCCACACCACCCG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246515 53 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 76 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M e panTro5.chr3 2469026 900 - 202621043 I a score=4051.000000 s hg38.chr3_KI270934v1_alt 8531 28 + 163458 TCTTCCTGTCACCGACGTTTCCTCGGCA s panTro5.chr3 2469926 28 - 202621043 TCTTCCTGTCACCGTCACTTCCTCAGTA i panTro5.chr3 I 900 C 0 s panPan2.chrUn_NW_014024201v1 80282 28 - 190779 TCTTCCTGTCACCGACGCTTCCTCAGTA i panPan2.chrUn_NW_014024201v1 I 96 C 0 s dasNov3.JH569502 2665239 15 - 6579706 -------GGCGCCAACCACACA------ i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246515 53 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 76 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=25751.000000 s hg38.chr3_KI270934v1_alt 8559 55 + 163458 TCCACAGGTCAGGCCATCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAG s panTro5.chr3 2469954 55 - 202621043 TCCAAAGGTCAGGCCACCTCTCTTCCTGTCACCAGCCCGTCCTCAGCATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80310 55 - 190779 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 T 53 T 55 s dasNov3.JH569502 2665254 47 - 6579706 GCAGCGGGCAACACCAACGCGC--CCTGACAGCA------CCCTGGGAACCTCAG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 76 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=12205.000000 s hg38.chr3_KI270934v1_alt 8614 58 + 163458 GTGACAC------------------CACCCCTCTTCCTGTCACCGACGCTTCCTCAGCATC--------------CACAGGTGACACCAC s panTro5.chr3 2470009 58 - 202621043 GTCACGC------------------CAACCCTCTTCCTGTCACTGACGCTTCCTCACCATC--------------TACAGGTCACGCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80365 58 - 190779 GTGACAC------------------CACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATC--------------CACAGGTGACACCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s dasNov3.JH569502 2665301 90 - 6579706 GGGACACGTCGTTTTCCCAAGCGAGCAGCCTGGGCCCGGTCACCTCTGGAGTCTCACCACCGGGGTCCCCGGGCAGGCAAGCAACATCGC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 76 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=2912.000000 s hg38.chr3_KI270934v1_alt 8672 10 + 163458 ----------CTCTCTTCCT s panTro5.chr3 2470067 10 - 202621043 ----------CACTCTTCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80423 10 - 190779 ----------CCCTCTTCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361650 10 - 192460366 ----------CTTTCTTTCT i macFas5.chr2 T 76 C 0 s dasNov3.JH569502 2665391 20 - 6579706 CTTCCACCGGCACCTCACCT i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=600.000000 s hg38.chr3_KI270934v1_alt 8682 1 + 163458 G s panTro5.chr3 2470077 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80433 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s dasNov3.JH569502 2665411 1 - 6579706 G i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361660 0 - 192460366 C e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=1607.000000 s hg38.chr3_KI270934v1_alt 8683 3 + 163458 TCA s panTro5.chr3 2470078 3 - 202621043 TCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80434 3 - 190779 TCA i panPan2.chrUn_NW_014024201v1 C 0 T 240 s macFas5.chr2 192361660 3 - 192460366 CCA i macFas5.chr2 C 0 C 0 s dasNov3.JH569502 2665412 3 - 6579706 ACA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=786.000000 s hg38.chr3_KI270934v1_alt 8686 6 + 163458 CCATCC s panTro5.chr3 2470081 6 - 202621043 CCGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80197 6 - 190779 CTGACG i panPan2.chrUn_NW_014024201v1 T 240 C 0 s macFas5.chr2 192361663 6 - 192460366 CCACCC i macFas5.chr2 C 0 I 1 s dasNov3.JH569502 2665415 6 - 6579706 CCACAC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=2808.000000 s hg38.chr3_KI270934v1_alt 8692 10 + 163458 ------CTTC-----CTCAGC s panTro5.chr3 2470087 10 - 202621043 ------CTTC-----CTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80203 10 - 190779 ------CTTC-----CTCAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s dasNov3.JH569502 2665421 21 - 6579706 CAGCCATTTCGCAGGCTCAGC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361669 1 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=16591.000000 s hg38.chr3_KI270934v1_alt 8702 39 + 163458 ATCTTCAGGTCACAC-CACCTC------TCTTCCTGTCACCGACGC s panTro5.chr3 2470097 39 - 202621043 ATCCACAGGTCACGC-CACCCC------TCTTACTGTCACCGACAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80213 39 - 190779 ATCCACAGGTCACGA-CACCTC------TCTTCCTGTCACCGACAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 39 - 192460366 ATTCACAGGTCACGC-TACCAC------TCTTCCTGTCACGGGTGC i macFas5.chr2 I 1 C 0 s dasNov3.JH569502 2665442 46 - 6579706 AAACTCAAGGCACACGGACCTCTGGGGTTCCTCCTCACACCAACAA i dasNov3.JH569502 C 0 I 14 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=3516.000000 s hg38.chr3_KI270934v1_alt 8741 8 + 163458 TTCCTCAG s panTro5.chr3 2470136 8 - 202621043 TTCCTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80252 8 - 190779 TTCCTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361709 8 - 192460366 TTTCTCAG i macFas5.chr2 C 0 T 48 e dasNov3.JH569502 2665488 14 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=12041.000000 s hg38.chr3_KI270934v1_alt 8749 30 + 163458 TGTCCACAGGTCACGCCACCTCTCTTCTTG s panTro5.chr3 2470144 30 - 202621043 TATCTACAGGCGACACCACCTCTCCTCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80260 30 - 190779 TATCCACAGGTCACGCCAACCCTCTTCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361669 30 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTG i macFas5.chr2 T 48 C 0 e dasNov3.JH569502 2665488 14 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=6012.000000 s hg38.chr3_KI270934v1_alt 8779 10 + 163458 TCACCGACGC s panTro5.chr3 2470174 10 - 202621043 TCACCGACGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80290 10 - 190779 TCACCGACGC i panPan2.chrUn_NW_014024201v1 C 0 T 288 s macFas5.chr2 192361699 10 - 192460366 TCACGGGTGC i macFas5.chr2 C 0 C 0 s dasNov3.JH569502 2665502 10 - 6579706 TGACTGACAC i dasNov3.JH569502 I 14 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=8118.000000 s hg38.chr3_KI270934v1_alt 8789 17 + 163458 TTCCTCAGTATCCACAG s panTro5.chr3 2470184 17 - 202621043 TTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80012 17 - 190779 TTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 T 288 C 0 s macFas5.chr2 192361709 17 - 192460366 TTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 57 s dasNov3.JH569502 2665512 17 - 6579706 GACCGTGGTGGGCACCA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=18873.000000 s hg38.chr3_KI270934v1_alt 8806 87 + 163458 --GTGACA-CCACCCCTCTTCCTGTCACCGACACTAACTCAGCATCCACAGGTGAC-----------ACCACCCCTCTTC----ATGTCACCGACGCTTCCTCAG s panTro5.chr3 2470201 87 - 202621043 --GTCACG-CCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTGAC-----------ACCACCCCTCTTC----CTGTCACCGACGCTTCCTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80029 87 - 190779 --GTCACG-CCACCCCTCTTCCTGTCACCGACGCTTCCTCACCATCCACAGGTCAG-----------GCCACCCCTCTTC----CTGTCACGGACACTTCCTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s dasNov3.JH569502 2665529 102 - 6579706 CTGCCACATCCACATCGCCATC---CACCGCTACCAGCCAAACCACTGCAGGAAGCGCTGCGCCGCAACCATTCCCCTCCGCTGGTACCACAGCCTCTGCGCCAG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=-384.000000 s hg38.chr3_KI270934v1_alt 8893 2 + 163458 -TA s panTro5.chr3 2470288 2 - 202621043 -TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80116 2 - 190779 -TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361669 2 - 192460366 -TA i macFas5.chr2 T 57 C 0 s dasNov3.JH569502 2665631 2 - 6579706 CT- i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=35035.000000 s hg38.chr3_KI270934v1_alt 8895 55 + 163458 TCCACAGGTCACGCCACCTCTCTTCCTGTCACCAGCCTTTCCTCAGCATCCACAG------ s panTro5.chr3 2470290 55 - 202621043 TCTACAGGTGACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80118 55 - 190779 TCCCCAGGTGACACCACCTCTCTTCCTGTCACTAGCCCTTCCTCAGCATCCACAG------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG------ i macFas5.chr2 C 0 T 51 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG------ i saiBol1.JH378146 T 55 T 55 s dasNov3.JH569502 2665633 61 - 6579706 CTCTCCAGTGACGGCCACACAGCTCCGGCAAGCACTGCGTTGTCGGCCGCAGCAAGCGCGC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=4041.000000 s hg38.chr3_KI270934v1_alt 8950 10 + 163458 GTGACACCAC s panTro5.chr3 2470345 10 - 202621043 GTCACACCAC i panTro5.chr3 C 0 T 1104 s panPan2.chrUn_NW_014024201v1 80173 10 - 190779 GTGACACCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s dasNov3.JH569502 2665694 10 - 6579706 CTGACACTAC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 51 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=3774.000000 s hg38.chr3_KI270934v1_alt 8960 35 + 163458 GCCTCTTCCTGTCACTAG------CCCTTCCTCAGCATCCT s panTro5.chr3 2469251 35 - 202621043 CGCTCTTACTGTCACCAG------CCCTTCCTCAGTATCCA i panTro5.chr3 T 1104 C 0 s panPan2.chrUn_NW_014024201v1 80183 35 - 190779 CCCTCTTCCTGTCACTGA------CGCTTCCTCAGCATCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s dasNov3.JH569502 2665704 32 - 6579706 ------TCACGCAACTGGGAGACACGCGTCTGTGATCT--- i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 51 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=16250.000000 s hg38.chr3_KI270934v1_alt 8995 42 + 163458 CAGGTCACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAG------------------------ s panTro5.chr3 2469286 42 - 202621043 CAGGTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAG------------------------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80218 42 - 190779 CAGGTCACGACACCTCTCTTCCTGTCACCGACATTTCCTCAG------------------------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361675 42 - 192460366 CAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAG------------------------ i macFas5.chr2 T 51 T 48 s dasNov3.JH569502 2665736 66 - 6579706 CCCCTAGCACCATCTCTCCCTCGGCCTCTGGGGCTGCAACAACTGGGCGGCCAGTAGCACAGTCAG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=10129.000000 s hg38.chr3_KI270934v1_alt 9037 18 + 163458 TACCCACAGGTCACGCCA s panTro5.chr3 2469328 18 - 202621043 TATCCACAGGTCACACCA i panTro5.chr3 C 0 I 1009 s panPan2.chrUn_NW_014024201v1 80260 18 - 190779 TATCCACAGGTCACGCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361669 18 - 192460366 TATTCACAGGTCACGCTA i macFas5.chr2 T 48 C 0 s dasNov3.JH569502 2665802 18 - 6579706 TCTCCACGTCTCTCAGCA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=14680.000000 s hg38.chr3_KI270934v1_alt 9055 39 + 163458 CCTCTCTTCCTGTCACCGACGCTTCCTCAGTGTCCACAG--------------- s panTro5.chr3 2470355 39 - 202621043 CCTCTCTCCCTGTCACCAGCCCTTCCTCAGTATCCACAG--------------- i panTro5.chr3 I 1009 C 0 s panPan2.chrUn_NW_014024201v1 80278 39 - 190779 ACCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG--------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361687 39 - 192460366 CCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG--------------- i macFas5.chr2 C 0 T 48 s dasNov3.JH569502 2665820 49 - 6579706 -----CCTCTTCTCAGGACCCCTCACCTACTTCCCACATGGCTCAGACTCAAGG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=10542.000000 s hg38.chr3_KI270934v1_alt 9094 31 + 163458 GTCA--CGCCACCCCTCTTCCTGTCACCGACGC s panTro5.chr3 2470394 31 - 202621043 GTCA--CGTCACTCATCTTCCTGTCACTGACAC i panTro5.chr3 C 0 T 1009 s panPan2.chrUn_NW_014024201v1 80317 31 - 190779 GTCA--CGCCACCCCTCTTCCTGTCACCAGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361678 31 - 192460366 GTCA--CGCTACCACTCTTCCTGTCACGGGTGC i macFas5.chr2 T 48 C 0 s dasNov3.JH569502 2665869 33 - 6579706 GCCAGCAACCAGCAGTGGCCGCGAAACCATCAC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=10792.000000 s hg38.chr3_KI270934v1_alt 9125 17 + 163458 TTCCTCAGTGTCCACAG s panTro5.chr3 2469416 17 - 202621043 TTCCTCAGTATCCACAG i panTro5.chr3 T 1009 C 0 s panPan2.chrUn_NW_014024201v1 80348 17 - 190779 TTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361709 17 - 192460366 TTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 s dasNov3.JH569502 2665902 14 - 6579706 ---TTCAGTCTCCCCGG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=14239.000000 s hg38.chr3_KI270934v1_alt 9142 72 + 163458 GTCAT-GCCACCCCTCTTCCGGTCAC--CGACACTTCCTCAGTATCTACAGGACAGGCCACCCCTCTTCCTGTCA s panTro5.chr3 2469433 72 - 202621043 GTCAC-ACCACCCCTCTTCCTGTCAC--CGACGCTTCCTCACCATCCACAGGTCACGACACCTCTCTTCCTGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80365 72 - 190779 GTGAC-ACCACCCCTCTTCCTGTCAC--CGACGCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCA i panPan2.chrUn_NW_014024201v1 C 0 T 48 s dasNov3.JH569502 2665916 68 - 6579706 -TGACTGACAGTGCCTTCCCGGGCACATCCCCACCTCCTCCTTCCACACCAGGCGGG-CACACCTCTCCA----- i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=8861.000000 s hg38.chr3_KI270934v1_alt 9214 48 + 163458 CCAGCCTTTCCTCAGCATCCACTGGTGACACCACGCCGCTTCCTGTCA s panTro5.chr3 2469505 48 - 202621043 CCGACATTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCTGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80389 48 - 190779 CCGACGCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCA i panPan2.chrUn_NW_014024201v1 T 48 T 336 s dasNov3.JH569502 2665984 24 - 6579706 -CAA----GCCCTGGCACACAC-------------------TCTGTCA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=10061.000000 s hg38.chr3_KI270934v1_alt 9262 50 + 163458 --CCGATACTTCCTCAGCATCCACAGGTCAGGACACCCCTCTTCCTGTCACC s panTro5.chr3 2469553 50 - 202621043 --CCGACGCTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCTGTCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80101 50 - 190779 --CGGACACTTCCTCAGTATCCCCAGGTGACACCACCTCTCTTCCTGTCACT i panPan2.chrUn_NW_014024201v1 T 336 T 43 s dasNov3.JH569502 2666008 52 - 6579706 GCGTCAAGCCCCATCGGAACACTTAGCTCAAGCCCAGCCAGCGACGGCCACC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=24.000000 s hg38.chr3_KI270934v1_alt 9312 5 + 163458 AGCCT s panTro5.chr3 2469603 5 - 202621043 GACAC i panTro5.chr3 C 0 I 817 s dasNov3.JH569502 2666060 5 - 6579706 GGTCC i dasNov3.JH569502 C 0 I 48 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M e panPan2.chrUn_NW_014024201v1 80151 43 - 190779 T a score=13395.000000 s hg38.chr3_KI270934v1_alt 9317 57 + 163458 TTCCTCAGTATCCACAGGTGACACCACGCCTCTTCCTGTCACTAACCCTTCCTCAGC s panTro5.chr3 2470425 57 - 202621043 TTCCTCAGTATCCACAGGTGACACCACCTCTCTTCCTGTCACCGACGCTTCCTCATT i panTro5.chr3 I 817 C 0 s panPan2.chrUn_NW_014024201v1 80108 57 - 190779 TTCCTCAGTATCCCCAGGTGACACCACCTCTCTTCCTGTCACTAGCCCTTCCTCAGC i panPan2.chrUn_NW_014024201v1 T 43 I 96 e dasNov3.JH569502 2666065 48 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=12675.000000 s hg38.chr3_KI270934v1_alt 9374 28 + 163458 ATCCACAGGTCACGCCACCCCTCTTCTT s panTro5.chr3 2470482 28 - 202621043 ATCCACAGGTGACACCACCCCTCTTCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80261 28 - 190779 ATCCACAGGTCACGCCAACCCTCTTCCT i panPan2.chrUn_NW_014024201v1 I 96 C 0 s macFas5.chr2 192361670 28 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCT i macFas5.chr2 T 56 C 0 e dasNov3.JH569502 2666065 48 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=9755.000000 s hg38.chr3_KI270934v1_alt 9402 19 + 163458 GTCACCGACGCTTCCTCAA s panTro5.chr3 2470510 19 - 202621043 GTCACCGACGCTTCCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80289 19 - 190779 GTCACCGACGCTTCCTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361698 19 - 192460366 GTCACGGGTGCTTTCTCAG i macFas5.chr2 C 0 T 48 s dasNov3.JH569502 2666113 17 - 6579706 GCCGCGGTCGGTTC--CAG i dasNov3.JH569502 I 48 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=28985.000000 s hg38.chr3_KI270934v1_alt 9421 57 + 163458 TATCCACAGGTCACGCCACCTCTCTTCTTGTCACCGACGCTTCCTCAGT---ATCCACAG s panTro5.chr3 2470529 57 - 202621043 TATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCAGT---ATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80308 57 - 190779 TATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGT---ATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361669 57 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGC---ATCCACAG i macFas5.chr2 T 48 T 48 s dasNov3.JH569502 2666130 50 - 6579706 -CACCCTGAGCGACACGACCTCTCGTTCT---------CCTTCTTCAGTTTGGTCCACAC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=19496.000000 s hg38.chr3_KI270934v1_alt 9478 48 + 163458 GTCACG-CCACCGCTCTTCATGACACCGATGCTTCCTCATTATCCACAG s panTro5.chr3 2470586 48 - 202621043 GTCACG-CCACCCCTCTTCCTGTCACCGACACTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80365 48 - 190779 GTGACA-CCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 GTCACG-CTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 57 s dasNov3.JH569502 2666180 49 - 6579706 GTGGGGAATTCCTCCCACCAAGCCCCAGATCCTCCGACATCAGTGACAA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=132.000000 s hg38.chr3_KI270934v1_alt 9526 6 + 163458 -GGGACA---- s panTro5.chr3 2470634 6 - 202621043 -GTCACA---- i panTro5.chr3 C 0 T 1105 s panPan2.chrUn_NW_014024201v1 80413 6 - 190779 -GTGACA---- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s dasNov3.JH569502 2666229 11 - 6579706 GGTGACGGCCA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=6966.000000 s hg38.chr3_KI270934v1_alt 9532 18 + 163458 CCACCCCTCTTCCTGTCA s panTro5.chr3 2469535 18 - 202621043 CCACCCCTCTTCCTGTCA i panTro5.chr3 T 1105 C 0 s panPan2.chrUn_NW_014024201v1 80419 18 - 190779 CCACCCCTCTTCCTGTCA i panPan2.chrUn_NW_014024201v1 C 0 T 430 s dasNov3.JH569502 2666240 18 - 6579706 CGGCCGTTCCTCCGGTCG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=200.000000 s hg38.chr3_KI270934v1_alt 9550 2 + 163458 CC s panTro5.chr3 2469553 2 - 202621043 CC i panTro5.chr3 C 0 C 0 e dasNov3.JH569502 2666258 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M e panPan2.chrUn_NW_014024201v1 80437 430 - 190779 T a score=11785.000000 s hg38.chr3_KI270934v1_alt 9552 61 + 163458 AGCCCTTCCTCAACATCCACAGGTGACACCACCCCTCTTCCTGTCACCGAAACTTCCTCAG------ s panTro5.chr3 2469555 61 - 202621043 GACGCTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAG------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80007 61 - 190779 AAGCCTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCAC------ i panPan2.chrUn_NW_014024201v1 T 430 C 0 s dasNov3.JH569502 2666258 57 - 6579706 -GATCTGGCTCCGTCTCCTTGACGGGAACCACCCAGGTCCTGG---------CTTCCTCGCCGGGCG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=844.000000 s hg38.chr3_KI270934v1_alt 9613 2 + 163458 TA s panTro5.chr3 2469616 2 - 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80068 2 - 190779 CA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361669 2 - 192460366 TA i macFas5.chr2 T 57 C 0 s dasNov3.JH569502 2666315 2 - 6579706 TG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=15140.000000 s hg38.chr3_KI270934v1_alt 9615 19 + 163458 TCCACAGGTCACGCCACCT s panTro5.chr3 2469618 19 - 202621043 TCCACAGGTCACACCACCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80070 19 - 190779 TCCACAGGTCAGGCCACCC i panPan2.chrUn_NW_014024201v1 C 0 T 193 s macFas5.chr2 192361671 19 - 192460366 TTCACAGGTCACGCTACCA i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 17246462 19 - 17725628 TTCACAGGCCACGCCACCC i saiBol1.JH378146 T 55 C 0 s dasNov3.JH569502 2666317 19 - 6579706 TCGAGTGAGCCCACCACCA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=19300.000000 s hg38.chr3_KI270934v1_alt 9634 29 + 163458 CTCTTCCTGTCACCGACACTTCCTCAGCA s panTro5.chr3 2469637 29 - 202621043 CTCTTCCTGTCACCGACGCTTCCTCATTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79896 29 - 190779 CTCTTCCTGTCACCGACGCTTCCTCAGCA i panPan2.chrUn_NW_014024201v1 T 193 C 0 s macFas5.chr2 192361690 29 - 192460366 CTCTTCCTGTCACGGGTGCTTTCTCAGCA i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 17246481 29 - 17725628 CGCTTCCTGTGACCAGCACCTCCTCGGCA i saiBol1.JH378146 C 0 T 48 s dasNov3.JH569502 2666336 29 - 6579706 GACACCCTGTCACTGTCCAGTCAGGGGCT i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=7358.000000 s hg38.chr3_KI270934v1_alt 9663 7 + 163458 TCCACAG s panTro5.chr3 2469666 7 - 202621043 TCCACAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79925 7 - 190779 TCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361719 7 - 192460366 TCCACAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246462 7 - 17725628 TTCACAG i saiBol1.JH378146 T 48 C 0 s dasNov3.JH569502 2666365 7 - 6579706 Tccacca i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=26609.000000 s hg38.chr3_KI270934v1_alt 9670 41 + 163458 GTCACGCCACCTCTCTTCCTGTCACCGACACTTCCTCAGCA------ s panTro5.chr3 2469673 41 - 202621043 GTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTA------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79932 41 - 190779 GTCATGCCACCCCTCTTCCTGTCACCAACGCTTCCTCAGCA------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361678 41 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCA------ i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 17246469 41 - 17725628 GCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCA------ i saiBol1.JH378146 C 0 T 48 s dasNov3.JH569502 2666372 41 - 6579706 ------ccaacaccgcttccaccaccaacaccagtacaccaccGACC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=6410.000000 s hg38.chr3_KI270934v1_alt 9711 7 + 163458 ---------TCCACAG s panTro5.chr3 2469714 7 - 202621043 ---------TCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79973 7 - 190779 ---------TCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361719 7 - 192460366 ---------TCCACAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246462 7 - 17725628 ---------TTCACAG i saiBol1.JH378146 T 48 C 0 s dasNov3.JH569502 2666413 16 - 6579706 TACATGCGCTCTACCG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=15538.000000 s hg38.chr3_KI270934v1_alt 9718 27 + 163458 ------GTCACGCCA---------CCCCTCTTCCTGTCACCG s panTro5.chr3 2469721 27 - 202621043 ------GTGACAGCA---------CCCCTCTTCCTGTGACCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79980 27 - 190779 ------GTCATGACA---------CCTCTCTTCCTGTCCCCG i panPan2.chrUn_NW_014024201v1 C 0 I 193 s macFas5.chr2 192361678 27 - 192460366 ------GTCACGCTA---------CCACTCTTCCTGTCACGG i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 17246469 27 - 17725628 ------GCCACGCCA---------CCCCGCTTCCTGTGACCA i saiBol1.JH378146 C 0 C 0 s dasNov3.JH569502 2666429 42 - 6579706 GTGAGCCTCTCAGCAGAGCTGCATCCTCACTTCCTCTCTCAG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=16488.000000 s hg38.chr3_KI270934v1_alt 9745 21 + 163458 ------ACACTTCCTCAGCATCCACAG s panTro5.chr3 2469748 21 - 202621043 ------ACGCTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80200 21 - 190779 ------ACGCTTCCTCAGCATCCACAG i panPan2.chrUn_NW_014024201v1 I 193 C 0 s macFas5.chr2 192361705 21 - 192460366 ------GTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246496 21 - 17725628 ------GCACCTCCTCGGCATCCACAG i saiBol1.JH378146 C 0 T 48 s dasNov3.JH569502 2666471 27 - 6579706 AGGAGCCCACCGCCCTCCCCTCCACCG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=16924.000000 s hg38.chr3_KI270934v1_alt 9766 26 + 163458 --GTCAGG-CCACCCCTCTTCCTGTCACC s panTro5.chr3 2469769 26 - 202621043 --GTGACA-CCACCACTCTTCCTGTCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80221 26 - 190779 --GTCACG-ACACCTCTCTTCCTGTCACC i panPan2.chrUn_NW_014024201v1 C 0 T 240 s macFas5.chr2 192361678 26 - 192460366 --GTCACG-CTACCACTCTTCCTGTCACG i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 17246469 26 - 17725628 --GCCACG-CCACCCCGCTTCCTGTGACC i saiBol1.JH378146 T 48 C 0 s dasNov3.JH569502 2666498 29 - 6579706 GGACCACTCCCATGACCCCTGCCGACACC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=8385.000000 s hg38.chr3_KI270934v1_alt 9792 14 + 163458 AGCCCTTCCTCAGC s panTro5.chr3 2469795 14 - 202621043 AGCCCTTCCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80007 14 - 190779 AAGCCTTCCTCAGT i panPan2.chrUn_NW_014024201v1 T 240 C 0 s macFas5.chr2 192361704 14 - 192460366 GGTGCTTTCTCAGC i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246495 14 - 17725628 AGCACCTCCTCGGC i saiBol1.JH378146 C 0 C 0 s dasNov3.JH569502 2666527 14 - 6579706 AGCACTTCACAACC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=-1390.000000 s hg38.chr3_KI270934v1_alt 9806 1 + 163458 -A s panTro5.chr3 2469809 1 - 202621043 -A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80021 1 - 190779 -A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 -A i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 17246509 1 - 17725628 -A i saiBol1.JH378146 C 0 T 48 s dasNov3.JH569502 2666541 1 - 6579706 C- i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=44277.000000 s hg38.chr3_KI270934v1_alt 9807 55 + 163458 TCCACAGGTCACGCCATCCCTCTTCTTGTCACCGACACTTCCTCAGCATCCACAG- s panTro5.chr3 2469810 55 - 202621043 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80022 55 - 190779 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCACCATCCACAG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG- i macFas5.chr2 C 0 T 57 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG- i saiBol1.JH378146 T 48 T 56 s dasNov3.JH569502 2666542 56 - 6579706 ACCACAAGCCACGCCTTCCCTCCCACGCCTACCTCTGCTACGTCGCCACCCCATGG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=13014.000000 s hg38.chr3_KI270934v1_alt 9862 87 + 163458 GACAGGCC---------------------ACCCCTCT--TCCTGTCACC-----------------AGCCTTTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACCGAC---------GCTTCCTCAG------ s panTro5.chr3 2469865 87 - 202621043 GTCACGCC---------------------ACCTCTCT--TCCTGTCACC-----------------GACACTTCCTCAGTATCCACAGGTCATGCCACCTCTCTTCCTGTCACCGTC---------ACTTCCTCAG------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80077 87 - 190779 GTCAGGCC---------------------ACCCCTCT--TCCTGTCACG-----------------GACACTTCCTCAGTATCCCCAGGTGACACCACCTCTCTTCCTGTCACTAGC---------CCTTCCTCAG------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s dasNov3.JH569502 2666598 140 - 6579706 GGCTGGCCCAGCAACAGCATTGGGGGCTAGCCCCACCAGCCCAGTCACCACCCAAGGCAATCCCGGGGCCGTTCCTCCG--GTCGGATCTGGCTCCGTCTCCTTGACGGGAACCACCCAGGTCCCGGCTTCCTCGCCGGGCG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 56 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=422.000000 s hg38.chr3_KI270934v1_alt 9949 1 + 163458 T s panTro5.chr3 2469952 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80164 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361669 1 - 192460366 T i macFas5.chr2 T 57 C 0 s dasNov3.JH569502 2666738 1 - 6579706 T i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 56 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=30451.000000 s hg38.chr3_KI270934v1_alt 9950 49 + 163458 GTCCACAGGTCACGCCACCTCTCTTCCTGTCACCAGCCTTTCCTCAGTA s panTro5.chr3 2469953 49 - 202621043 ATCCAAAGGTCAGGCCACCTCTCTTCCTGTCACCAGCCCGTCCTCAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80165 49 - 190779 ATCCACAGGTGACACCACCCCTCTTCCTGTCACTGACGCTTCCTCAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 49 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCA i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 17246461 49 - 17725628 GTTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCA i saiBol1.JH378146 T 56 T 48 s dasNov3.JH569502 2666739 49 - 6579706 GTCGAGCAAGCCCACCAACAGACACCCTGTCACCGTCCAGTCAGGGGCT i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=5386.000000 s hg38.chr3_KI270934v1_alt 9999 7 + 163458 TCCACAG s panTro5.chr3 2470002 7 - 202621043 TCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80214 7 - 190779 TCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361719 7 - 192460366 TCCACAG i macFas5.chr2 C 0 T 56 s dasNov3.JH569502 2666788 7 - 6579706 TCCACCA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246510 48 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=5692.000000 s hg38.chr3_KI270934v1_alt 10006 40 + 163458 GTGACACCACTCCTCTTCCTGTCACTAGCCCTTCCTCAGC s panTro5.chr3 2470009 40 - 202621043 GTCACGCCAACCCTCTTCCTGTCACTGACGCTTCCTCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80221 40 - 190779 GTCACGACACCTCTCTTCCTGTCACCGACATTTCCTCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s dasNov3.JH569502 2666795 32 - 6579706 ------CCAACACGAGTAC-ACCACCGAC-CTACGTGAGC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246510 48 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=20183.000000 s hg38.chr3_KI270934v1_alt 10046 49 + 163458 ATCCACAGGTCACGCCACCCCTCTTCATGTCACCGACGCTTCCTCAGCA---- s panTro5.chr3 2470049 49 - 202621043 ATCTACAGGTCACGCCACCACTCTTCTTGTCACCGACACTTCCTCAGTA---- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80261 49 - 190779 ATCCACAGGTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGTA---- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 49 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCA---- i macFas5.chr2 T 56 C 0 s dasNov3.JH569502 2666827 43 - 6579706 -TCTACCGGTGA---------GCCTCTCAGCAGAGCTGCATCCTCACTTCCTC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246510 48 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=7363.000000 s hg38.chr3_KI270934v1_alt 10095 7 + 163458 TCCACAG s panTro5.chr3 2470098 7 - 202621043 TCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80310 7 - 190779 TCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361719 7 - 192460366 TCCACAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246462 7 - 17725628 TTCACAG i saiBol1.JH378146 T 48 C 0 s dasNov3.JH569502 2666870 6 - 6579706 -TCTCAG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=23250.000000 s hg38.chr3_KI270934v1_alt 10102 28 + 163458 GTCACGCCACCCCTCTTCCTGTCACCAG s panTro5.chr3 2470105 28 - 202621043 GTCACGCCACCCCTCTTACTGTCACCGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80317 28 - 190779 GTCACGCCACCCCTCTTCCTGTCACCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361678 28 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGG i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 17246469 28 - 17725628 GCCACGCCACCCCGCTTCCTGTGACCAG i saiBol1.JH378146 C 0 C 0 s dasNov3.JH569502 2666876 28 - 6579706 AGGAGCCCACCACCCTCCCCTCCACCGG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=12936.000000 s hg38.chr3_KI270934v1_alt 10130 20 + 163458 CCTTTCCTCAGCATCCACAG s panTro5.chr3 2470133 20 - 202621043 CACTTCCTCACTATCTACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80345 20 - 190779 CCCTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361706 20 - 192460366 TGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 s saiBol1.JH378146 17246497 20 - 17725628 CACCTCCTCGGCATCCACAG i saiBol1.JH378146 C 0 T 55 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=8906.000000 s hg38.chr3_KI270934v1_alt 10150 40 + 163458 GTGACACCACGCCTCTTCCTGTCACTAGCCCTTCCTCAGC s panTro5.chr3 2470153 40 - 202621043 GCGACACCACCTCTCCTCCTGTCACCGACGCTTCCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80365 40 - 190779 GTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=15089.000000 s hg38.chr3_KI270934v1_alt 10190 32 + 163458 ATCCACAGGTCACGCCACCCCTCTTCATGTCA s panTro5.chr3 2470193 32 - 202621043 ATCCACAGGTCACGCCACCTCTCTTCCTGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80405 32 - 190779 ATCCACAGGTGACACCACCCCTCTTCCTGTCA i panPan2.chrUn_NW_014024201v1 C 0 T 619 s macFas5.chr2 192361670 32 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCA i macFas5.chr2 T 56 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=817.000000 s hg38.chr3_KI270934v1_alt 10222 6 + 163458 CCGACG s panTro5.chr3 2470225 6 - 202621043 CCGACG i panTro5.chr3 C 0 C 0 s macFas5.chr2 192361702 6 - 192460366 CGGGTG i macFas5.chr2 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M e panPan2.chrUn_NW_014024201v1 80437 619 - 190779 T a score=9442.000000 s hg38.chr3_KI270934v1_alt 10228 18 + 163458 CTTCCTCAGTATCCACAG s panTro5.chr3 2470231 18 - 202621043 CTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79818 18 - 190779 CTTCCTCAGCATCCACAG i panPan2.chrUn_NW_014024201v1 T 619 C 0 s macFas5.chr2 192361708 18 - 192460366 CTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 51 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=10536.000000 s hg38.chr3_KI270934v1_alt 10246 45 + 163458 GTGACACCACCCCTCTTCCTGTCACCAGCTCTTCCTCAGCATCCT s panTro5.chr3 2470249 45 - 202621043 GTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCACTATCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79836 45 - 190779 GTGACACCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 51 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=24728.000000 s hg38.chr3_KI270934v1_alt 10291 51 + 163458 CAGGTCACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGCATCCACAG s panTro5.chr3 2470294 51 - 202621043 CAGGTGACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79881 51 - 190779 CAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGCATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361675 51 - 192460366 CAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 51 T 56 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=2536.000000 s hg38.chr3_KI270934v1_alt 10342 12 + 163458 GTGACACCACCC s panTro5.chr3 2470345 12 - 202621043 GTCACACCACCC i panTro5.chr3 C 0 I 1105 s panPan2.chrUn_NW_014024201v1 79932 12 - 190779 GTCATGCCACCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=1146.000000 s hg38.chr3_KI270934v1_alt 10354 4 + 163458 CTCT s panTro5.chr3 2471462 4 - 202621043 CTCT i panTro5.chr3 I 1105 T 864 s panPan2.chrUn_NW_014024201v1 79944 4 - 190779 CTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=6162.000000 s hg38.chr3_KI270934v1_alt 10358 24 + 163458 TCCTGTCACCGACACTTCCTCAGC s panTro5.chr3 2470602 24 - 202621043 TCCTGTCACCGACACTTCCTCAGT i panTro5.chr3 T 864 C 0 s panPan2.chrUn_NW_014024201v1 79948 24 - 190779 TCCTGTCACCAACGCTTCCTCAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=6897.000000 s hg38.chr3_KI270934v1_alt 10382 14 + 163458 ATCCACAGGTCACG s panTro5.chr3 2470626 14 - 202621043 ATCCACAGGTCACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79972 14 - 190779 ATCCACAGGTCATG i panPan2.chrUn_NW_014024201v1 C 0 I 241 s macFas5.chr2 192361670 14 - 192460366 ATTCACAGGTCACG i macFas5.chr2 T 56 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=2702.000000 s hg38.chr3_KI270934v1_alt 10396 9 + 163458 CCACCCATC s panTro5.chr3 2470640 9 - 202621043 CCACCCCTC i panTro5.chr3 C 0 I 817 s panPan2.chrUn_NW_014024201v1 80227 9 - 190779 ACACCTCTC i panPan2.chrUn_NW_014024201v1 I 241 C 0 s macFas5.chr2 192361684 9 - 192460366 CTACCACTC i macFas5.chr2 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=14470.000000 s hg38.chr3_KI270934v1_alt 10405 33 + 163458 TTCCTGTCACCGGCCTTTCCTCAGCTTCCACAG s panTro5.chr3 2471466 33 - 202621043 TTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro5.chr3 I 817 C 0 s panPan2.chrUn_NW_014024201v1 80236 33 - 190779 TTCCTGTCACCGACATTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361693 33 - 192460366 TTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=2117.000000 s hg38.chr3_KI270934v1_alt 10438 12 + 163458 GTGACACCACCC s panTro5.chr3 2471499 12 - 202621043 GTCACGCCACCT i panTro5.chr3 C 0 T 1153 s panPan2.chrUn_NW_014024201v1 80269 12 - 190779 GTCACGCCAACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=5667.000000 s hg38.chr3_KI270934v1_alt 10450 28 + 163458 GTCTTCCTGTCACCAACGTTTCCTCGGC s panTro5.chr3 2470358 28 - 202621043 CTCTCCCTGTCACCAGCCCTTCCTCAGT i panTro5.chr3 T 1153 C 0 s panPan2.chrUn_NW_014024201v1 80281 28 - 190779 CTCTTCCTGTCACCGACGCTTCCTCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=546.000000 s hg38.chr3_KI270934v1_alt 10478 1 + 163458 A s panTro5.chr3 2470386 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80309 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 56 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73792785 1048 + 74750902 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=57158.000000 s hg38.chr3_KI270934v1_alt 10479 55 + 163458 TCCACAGGTCATGCCACCCCTCTTCCTGTCACCAGCACTTCCTCAGCATCCACAG s panTro5.chr3 2470387 55 - 202621043 TCCACAGGTCACGTCACTCATCTTCCTGTCACTGACACTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80310 55 - 190779 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 s calJac3.chr17 73793833 55 + 74750902 TCCACAGGCCACGCGGCCCCTCTTGCTGTCACCAGCACCGCCTCGGCACCCACAG i calJac3.chr17 I 1048 T 55 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 T 55 T 55 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=5685.000000 s hg38.chr3_KI270934v1_alt 10534 22 + 163458 GTGACACCACCCCTCTTCCTGG s panTro5.chr3 2470442 22 - 202621043 GTGACACCACCTCTCTTCCTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80365 22 - 190779 GTGACACCACCCCTCTTCCTGT i panPan2.chrUn_NW_014024201v1 C 0 T 144 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=50691.000000 s hg38.chr3_KI270934v1_alt 10556 208 + 163458 CACCGACACTTCCTCAGTATCCACAGGTCACACCACCCCTCTTCTTGTCACCGACGCTTCGTCAGTATCCACAGGTGACACCACCCGTCTTCCTGTCACCAGCCCTTCCTCAGCATCTACAGGTCACACCACCCCTCTACCTGTCACCGACACTCCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACCAATGCTTCCTCA s panTro5.chr3 2470464 208 - 202621043 CACCGACGCTTCCTCATTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAGTATCCACAGGTCACACCACCCCTCTTCCTGTCACCGACGCTTCCTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80243 208 - 190779 CACCGACATTTCCTCAGTATCCACAGGTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCAGCAGTGCTACCTCA i panPan2.chrUn_NW_014024201v1 T 144 T 240 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=9908.000000 s hg38.chr3_KI270934v1_alt 10764 50 + 163458 TTATCCACACGTCACGCCACCTCTCTTCATGTCACCAGCCCTTCCTCAGC s panTro5.chr3 2470672 50 - 202621043 TTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80211 50 - 190779 GCATCCACAGGTCACGACACCTCTCTTCCTGTCACCGACATTTCCTCAGT i panPan2.chrUn_NW_014024201v1 T 240 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=18318.000000 s hg38.chr3_KI270934v1_alt 10814 39 + 163458 ATCCACAGGTCACGCCACCTCTCTTCCTGTCACCGACAC s panTro5.chr3 2470722 39 - 202621043 ATCCACAGGTCACGCCACCTCTCTTCCTGTCACCGACAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80261 39 - 190779 ATCCACAGGTCACGCCAACCCTCTTCCTGTCACCGACGC i panPan2.chrUn_NW_014024201v1 C 0 T 288 s macFas5.chr2 192361670 39 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGC i macFas5.chr2 T 56 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=3643.000000 s hg38.chr3_KI270934v1_alt 10853 9 + 163458 TTCCGCAGC s panTro5.chr3 2470761 9 - 202621043 TTCCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80012 9 - 190779 TTCCTCAGT i panPan2.chrUn_NW_014024201v1 T 288 C 0 s macFas5.chr2 192361709 9 - 192460366 TTTCTCAGC i macFas5.chr2 C 0 T 48 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=546.000000 s hg38.chr3_KI270934v1_alt 10862 1 + 163458 A s panTro5.chr3 2470770 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80021 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 48 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=1808.000000 s hg38.chr3_KI270934v1_alt 10863 2 + 163458 TC s panTro5.chr3 2470771 2 - 202621043 TC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80022 2 - 190779 TC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 2 - 192460366 TT i macFas5.chr2 C 0 C 0 s calJac3.chr17 73793833 2 + 74750902 TC i calJac3.chr17 T 55 C 0 s saiBol1.JH378146 17246462 2 - 17725628 TT i saiBol1.JH378146 T 55 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e cebCap1.NW_016107444v1 6332468 1646 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=49326.000000 s hg38.chr3_KI270934v1_alt 10865 35 + 163458 CACAGGTCACGCCACCCCTCTTCCTGTCACCAGCA s panTro5.chr3 2470773 35 - 202621043 CACAGGTCATGCCACCTCTCTTCCTGTCACCGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80024 35 - 190779 CACAGGTCACGCCACCCCTCTTCCTGTCACCGACG i panPan2.chrUn_NW_014024201v1 C 0 T 48 s macFas5.chr2 192361673 35 - 192460366 CACAGGTCACGCTACCACTCTTCCTGTCACGGGTG i macFas5.chr2 C 0 C 0 s calJac3.chr17 73793835 35 + 74750902 CACAGGCCACGCGGCCCCTCTTGCTGTCACCAGCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17246464 35 - 17725628 CACAGGCCACGCCACCCCGCTTCCTGTGACCAGCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6334114 35 + 6778120 CACAGGCCACGCCACCCGGCCTCCTGCCACCAGTA i cebCap1.NW_016107444v1 I 1646 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=4569.000000 s hg38.chr3_KI270934v1_alt 10900 4 + 163458 CTTC s panTro5.chr3 2470808 4 - 202621043 CTTC i panTro5.chr3 C 0 I 1153 s panPan2.chrUn_NW_014024201v1 80011 4 - 190779 CTTC i panPan2.chrUn_NW_014024201v1 T 48 C 0 s macFas5.chr2 192361708 4 - 192460366 CTTT i macFas5.chr2 C 0 C 0 s calJac3.chr17 73793870 4 + 74750902 CCGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17246499 4 - 17725628 CCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6334149 4 + 6778120 CCTC i cebCap1.NW_016107444v1 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=25311.000000 s hg38.chr3_KI270934v1_alt 10904 14 + 163458 CTCAGCATCCACAG s panTro5.chr3 2471965 14 - 202621043 CTCAGCATCCACAG i panTro5.chr3 I 1153 C 0 s panPan2.chrUn_NW_014024201v1 80015 14 - 190779 CTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361712 14 - 192460366 CTCAGCATCCACAG i macFas5.chr2 C 0 T 56 s calJac3.chr17 73793874 14 + 74750902 CTCGGCACCCACAG i calJac3.chr17 C 0 T 55 s saiBol1.JH378146 17246503 14 - 17725628 CTCGGCATCCACAG i saiBol1.JH378146 C 0 T 55 s cebCap1.NW_016107444v1 6334153 14 + 6778120 CTCGGCATCCACAG i cebCap1.NW_016107444v1 C 0 I 124 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=8037.000000 s hg38.chr3_KI270934v1_alt 10918 34 + 163458 GTGACACCACCCCTCTTCCTGTCACCGACACTTA s panTro5.chr3 2471979 34 - 202621043 GTGACACCACCCCTCTTCCTGTCACCGAAGCTTC i panTro5.chr3 C 0 T 1201 s panPan2.chrUn_NW_014024201v1 80029 34 - 190779 GTCACGCCACCCCTCTTCCTGTCACCGACGCTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=19482.000000 s hg38.chr3_KI270934v1_alt 10952 88 + 163458 CTCAGCATCCACAGGTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACGCCTCTTCCTGTCACT s panTro5.chr3 2470812 88 - 202621043 CTCAGTATCCAAAGGTCAGGCCACCTCTCTTCCTGTCACCAGCCCGTCCTCAGCATCCACAGGTCACGCCAACCCTCTTCCTGTCACT i panTro5.chr3 T 1201 C 0 s panPan2.chrUn_NW_014024201v1 80063 88 - 190779 CTCACCATCCACAGGTCAGGCCACCCCTCTTCCTGTCACGGACACTTCCTCAGTATCCCCAGGTGACACCACCTCTCTTCCTGTCACT i panPan2.chrUn_NW_014024201v1 C 0 T 332 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=13.000000 s hg38.chr3_KI270934v1_alt 11040 5 + 163458 AGCCC s panTro5.chr3 2470900 5 - 202621043 GACGC i panTro5.chr3 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M e panPan2.chrUn_NW_014024201v1 80151 332 - 190779 T a score=33028.000000 s hg38.chr3_KI270934v1_alt 11045 153 + 163458 TTCCTCAGCATCCACAGGTCACGCCACTCCTCTTCTTGTCACCGACGCTTCCTCAGCATCCACAGGTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACGCCTCTTCCTGTCACTAGCCCTTCCTCAGC s panTro5.chr3 2470905 153 - 202621043 TTCCTCACCATCTACAGGTCACGCCACCACTCTTCTTGTCACCGACACTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTACTGTCACCGACACTTCCTCACTATCTACAGGCGACACCACCTCTCCTCCTGTCACCGACGCTTCCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79819 153 - 190779 TTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGCATCCACAGGTCATGCCACCCCTCTTCCTGTCACCAACGCTTCCTCAGC i panPan2.chrUn_NW_014024201v1 T 332 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=15736.000000 s hg38.chr3_KI270934v1_alt 11198 35 + 163458 ATCCACCGGTCATGCCACCTCTCTTCCTGTCACCG s panTro5.chr3 2471058 35 - 202621043 ATCCACAGGTCACGCCACCTCTCTTCCTGTCACCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79972 35 - 190779 ATCCACAGGTCATGACACCTCTCTTCCTGTCCCCG i panPan2.chrUn_NW_014024201v1 C 0 T 96 s macFas5.chr2 192361670 35 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGG i macFas5.chr2 T 56 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=10176.000000 s hg38.chr3_KI270934v1_alt 11233 21 + 163458 ACACTTCCTCAGCATCCACAG s panTro5.chr3 2471093 21 - 202621043 ACGCTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79911 21 - 190779 ACGCTTCCTCAGCATCCACAG i panPan2.chrUn_NW_014024201v1 T 96 C 0 s macFas5.chr2 192361705 21 - 192460366 GTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 57 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=17235.000000 s hg38.chr3_KI270934v1_alt 11254 79 + 163458 GTGACACCACCTCTCTTCCTGTCACCGACACTTCCTCAGCATACACAGGTGACACCACCTCTCTTCCTGTCACCGACAC s panTro5.chr3 2471114 79 - 202621043 GTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCACTATCTACAGGTGACACCACCTCTCTTCCTGTCACCGACGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79932 79 - 190779 GTCATGCCACCCCTCTTCCTGTCACCAACGCTTCCTCAGCATCCACAGGTCATGACACCTCTCTTCCTGTCCCCGAAGC i panPan2.chrUn_NW_014024201v1 C 0 T 25 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=1631.000000 s hg38.chr3_KI270934v1_alt 11333 23 + 163458 TTCCTCATCATCCACAGGTGACA s panTro5.chr3 2471193 23 - 202621043 TTCCTCAGTATCCACAGGTCACA i panTro5.chr3 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M e panPan2.chrUn_NW_014024201v1 80011 25 - 190779 T a score=4234.000000 s hg38.chr3_KI270934v1_alt 11356 21 + 163458 CCACCCCTCTTCTTGTCACCG s panTro5.chr3 2471216 21 - 202621043 CCACCTCTCTCCCTGTCACCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79986 21 - 190779 ACACCTCTCTTCCTGTCCCCG i panPan2.chrUn_NW_014024201v1 T 25 I 193 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=2230.000000 s hg38.chr3_KI270934v1_alt 11377 13 + 163458 AGACTTCCTCAGT s panTro5.chr3 2471237 13 - 202621043 GCCCTTCCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80200 13 - 190779 ACGCTTCCTCAGC i panPan2.chrUn_NW_014024201v1 I 193 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=22015.000000 s hg38.chr3_KI270934v1_alt 11390 49 + 163458 ATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGCA s panTro5.chr3 2471250 49 - 202621043 ATCCACAGGTCACGTCACTCATCTTCCTGTCACTGACACTTCCTCAGTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80213 49 - 190779 ATCCACAGGTCACGACACCTCTCTTCCTGTCACCGACATTTCCTCAGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2779758 49 - 123690457 ATCCACAGGTCACACCACCTCTCTTCCTGTCACTGATGCTTCCTCAGAA i nomLeu3.chr11 M 3534 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I a score=26681.000000 s hg38.chr3_KI270934v1_alt 11439 37 + 163458 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCAACA s panTro5.chr3 2471299 37 - 202621043 TCCACAGGTGACACCACCTCTCTTCCTGTCACCGACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80262 37 - 190779 TCCACAGGTCACGCCAACCCTCTTCCTGTCACCGACG i panPan2.chrUn_NW_014024201v1 C 0 T 288 s nomLeu3.chr11 2779807 37 - 123690457 TCCACAGGCCACCCCACCCCTCTTCCTGTCACTGACA i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378146 17246462 37 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCA i saiBol1.JH378146 T 55 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I a score=6764.000000 s hg38.chr3_KI270934v1_alt 11476 9 + 163458 CTTCCTCAG s panTro5.chr3 2471336 9 - 202621043 CTTCCTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80011 9 - 190779 CTTCCTCAG i panPan2.chrUn_NW_014024201v1 T 288 C 0 s nomLeu3.chr11 2779844 9 - 123690457 CTTCCTCAG i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378146 17246499 9 - 17725628 CCTCCTCGG i saiBol1.JH378146 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I a score=11099.000000 s hg38.chr3_KI270934v1_alt 11485 9 + 163458 TATCCACAG s panTro5.chr3 2471345 9 - 202621043 CATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80020 9 - 190779 TATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2779853 9 - 123690457 CATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361669 9 - 192460366 TATTCACAG i macFas5.chr2 T 57 C 0 s saiBol1.JH378146 17246508 9 - 17725628 CATCCACAG i saiBol1.JH378146 C 0 T 48 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=28314.000000 s hg38.chr3_KI270934v1_alt 11494 26 + 163458 GTCACGCCACCCCTCTTCATGTCACC s panTro5.chr3 2471354 26 - 202621043 GTCACGACACCTCTCTTCCTGTCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80029 26 - 190779 GTCACGCCACCCCTCTTCCTGTCACC i panPan2.chrUn_NW_014024201v1 C 0 T 48 s nomLeu3.chr11 2779862 26 - 123690457 GTCACATCACCCCTCTTCCTGTCACC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 26 - 192460366 GTCACGCTACCACTCTTCCTGTCACG i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 17246469 26 - 17725628 GCCACGCCACCCCGCTTCCTGTGACC i saiBol1.JH378146 T 48 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=22247.000000 s hg38.chr3_KI270934v1_alt 11520 22 + 163458 AGCCCTTCCTCAGCATCCACAG s panTro5.chr3 2471380 22 - 202621043 GACATTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80007 22 - 190779 AAGCCTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 T 48 C 0 s nomLeu3.chr11 2779888 22 - 123690457 AGCGCTTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361704 22 - 192460366 GGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246495 22 - 17725628 AGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 C 0 T 55 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=29373.000000 s hg38.chr3_KI270934v1_alt 11542 39 + 163458 GTCACACCACCCCTCTTCCTGTCACCGACGCTTCGTCAG s panTro5.chr3 2471402 39 - 202621043 GTCACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80029 39 - 190779 GTCACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2779910 39 - 123690457 GTCACACCACTTCTCTTCCTGTCACCAGTGCTTCCTCAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 39 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAG i macFas5.chr2 T 48 T 48 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=39100.000000 s hg38.chr3_KI270934v1_alt 11581 57 + 163458 TGTCCACAGGTCACGCCACCTCTC-TTCCTGTCACCGACGCTTCCTCAGTGTTCACAG s panTro5.chr3 2471441 58 - 202621043 TGTCCACAGGTGACACCACCCCTCTTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80068 57 - 190779 CATCCACAGGTCAGGCCACCCCTC-TTCCTGTCACGGACACTTCCTCAGTATCCCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2779949 57 - 123690457 CATCCACAGGTCACATCACTTCTC-TTCCTGTCACTGACACTTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361669 57 - 192460366 TATTCACAGGTCACGCTACCACTC-TTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 66 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=10201.000000 s hg38.chr3_KI270934v1_alt 11638 21 + 163458 GTCATGCCACCTCTCTTCCTG s panTro5.chr3 2471499 21 - 202621043 GTCACGCCACCTCTCTTCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80125 21 - 190779 GTGACACCACCTCTCTTCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2780006 21 - 123690457 GTCACACCACCCCTCTTCCTG i nomLeu3.chr11 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 66 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I a score=3561.000000 s hg38.chr3_KI270934v1_alt 11659 9 + 163458 TCACCATCC s panTro5.chr3 2471520 9 - 202621043 TCACCGACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80146 9 - 190779 TCACTAGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2780027 9 - 123690457 TCACTGACA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361660 9 - 192460366 CCACCACCC i macFas5.chr2 T 66 I 1 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=4776.000000 s hg38.chr3_KI270934v1_alt 11668 10 + 163458 CTTCCTCAGC s panTro5.chr3 2471529 10 - 202621043 CTTCCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80155 10 - 190779 CTTCCTCAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2780036 10 - 123690457 CGTCCTCAGC i nomLeu3.chr11 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361669 1 - 192460366 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=35919.000000 s hg38.chr3_KI270934v1_alt 11678 47 + 163458 ATCCTCAGGTCACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAG s panTro5.chr3 2471539 47 - 202621043 ATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80165 47 - 190779 ATCCACAGGTGACACCACCCCTCTTCCTGTCACTGACGCTTCCTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2780046 47 - 123690457 ATCCACAGGTCACACCACCTCTCTTCCTGTCACTGACACTTCCTCAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361670 47 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAG i macFas5.chr2 I 1 T 48 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=43212.000000 s hg38.chr3_KI270934v1_alt 11725 57 + 163458 TGTCCACAGGTCACGCCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTGTCCACAG s panTro5.chr3 2471586 57 - 202621043 TATCTACAGGTGACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80212 57 - 190779 CATCCACAGGTCACGACACCTCTCTTCCTGTCACCGACATTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2780093 57 - 123690457 CATCCACAGGTCACACCACCTCTCTTCCTGTCACTGACACTTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361669 57 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 48 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=37902.000000 s hg38.chr3_KI270934v1_alt 11782 48 + 163458 GTCATGCCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTGTCCACAG s panTro5.chr3 2471643 48 - 202621043 GTCACGCCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80269 48 - 190779 GTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2780150 48 - 123690457 GTCACACCACCTCTCTTCCTGTCACTGACACTTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 48 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=20114.000000 s hg38.chr3_KI270934v1_alt 11830 33 + 163458 GTCACGCTACCCCTCTTCCTCTCACCAGCCTTT s panTro5.chr3 2471691 33 - 202621043 GTGACACCACCTCACTTCCTGTCACGAGCCCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80317 33 - 190779 GTCACGCCACCCCTCTTCCTGTCACCAGCCCTT i panPan2.chrUn_NW_014024201v1 C 0 T 529 s nomLeu3.chr11 2780198 33 - 123690457 GTCACACCACCTCTCTTCCTGTCACTGACACGT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 33 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTT i macFas5.chr2 T 48 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=13412.000000 s hg38.chr3_KI270934v1_alt 11863 15 + 163458 CCTCAGTATCCACAG s panTro5.chr3 2471724 15 - 202621043 CCTCAGCATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79821 15 - 190779 CCTCAGCATCCACAG i panPan2.chrUn_NW_014024201v1 T 529 C 0 s nomLeu3.chr11 2780231 15 - 123690457 CCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361711 15 - 192460366 TCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=35920.000000 s hg38.chr3_KI270934v1_alt 11878 81 + 163458 GTGACACCACGCCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAGGTCAGGCCACCCCTCTTCCTGTCACCAGCCTTT s panTro5.chr3 2471739 81 - 202621043 GTCGCACCACGCCTCTTCCTGTCACCGACGCTTCCTCCGTATCCACAGGTCACGCCACCCATCTTCCTGTCACCAGCCCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79836 81 - 190779 GTGACACCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTT i panPan2.chrUn_NW_014024201v1 C 0 T 96 s nomLeu3.chr11 2780246 81 - 123690457 GTCACACCACCTCTCTTCCTGTCACTGACACTTCCTCAGCATCCACAGGTCACACCACCTCTCTTCCTGTCACCAGTGCTT i nomLeu3.chr11 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I a score=26141.000000 s hg38.chr3_KI270934v1_alt 11959 55 + 163458 CCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGC s panTro5.chr3 2471820 55 - 202621043 CCTCAGCATCCACAGGTCACGTCACTCCTCTTCCTATCACCGACACTTCCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79821 55 - 190779 CCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGC i panPan2.chrUn_NW_014024201v1 T 96 C 0 s nomLeu3.chr11 2780327 55 - 123690457 CCTCAGCATCCACAGGTCACATCACTTCTCTTCCTGTCACTGACACTTCCTCAGC i nomLeu3.chr11 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I a score=910.000000 s hg38.chr3_KI270934v1_alt 12014 1 + 163458 A s panTro5.chr3 2471875 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79876 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2780382 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 56 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=61880.000000 s hg38.chr3_KI270934v1_alt 12015 55 + 163458 TCCACAGGTCACGCCACCTCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAG s panTro5.chr3 2471876 55 - 202621043 TCCACAGGTCACGCCACCTCTCTTCCTGTCACTGACGCTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79877 55 - 190779 TCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGCATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2780383 55 - 123690457 TCCACAGGTCACATCACTTCTCTTCCTGTCACTGACACTTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 T 55 T 48 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=51343.000000 s hg38.chr3_KI270934v1_alt 12070 48 + 163458 GTCACGCCACCCCTCTTCCTGACACCGACACTTCCTCAGCATCCACAG s panTro5.chr3 2471931 48 - 202621043 GTGACACCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79932 48 - 190779 GTCATGCCACCCCTCTTCCTGTCACCAACGCTTCCTCAGCATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2780438 48 - 123690457 GTCACATCACCTCTCTTCCTGTCACCAGCGCTTCCTCAGAATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 48 s saiBol1.JH378146 17246469 48 - 17725628 GCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 T 48 T 48 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=25449.000000 s hg38.chr3_KI270934v1_alt 12118 27 + 163458 GTCACGCCACCCTTCTTCCTGTCACCG s panTro5.chr3 2471979 27 - 202621043 GTGACACCACCCCTCTTCCTGTCACCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79980 27 - 190779 GTCATGACACCTCTCTTCCTGTCCCCG i panPan2.chrUn_NW_014024201v1 C 0 I 49 s nomLeu3.chr11 2780486 27 - 123690457 GCCACCCCACCCCTCTTCCTGTCACTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 27 - 192460366 GTCACGCTACCACTCTTCCTGTCACGG i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 17246469 27 - 17725628 GCCACGCCACCCCGCTTCCTGTGACCA i saiBol1.JH378146 T 48 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=22854.000000 s hg38.chr3_KI270934v1_alt 12145 21 + 163458 ACACTTCCTCAGCATCCATAG s panTro5.chr3 2472006 21 - 202621043 AAGCTTCCTCAGCATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80056 21 - 190779 ACGCTTCCTCACCATCCACAG i panPan2.chrUn_NW_014024201v1 I 49 C 0 s nomLeu3.chr11 2780513 21 - 123690457 ACACTTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361705 21 - 192460366 GTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246496 21 - 17725628 GCACCTCCTCGGCATCCACAG i saiBol1.JH378146 C 0 T 55 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=7993.000000 s hg38.chr3_KI270934v1_alt 12166 12 + 163458 GTCACGCCACCT s panTro5.chr3 2472027 12 - 202621043 GTCATGCCACCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80077 12 - 190779 GTCAGGCCACCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2780534 12 - 123690457 GTCACACCACCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 12 - 192460366 GTCACGCTACCA i macFas5.chr2 T 48 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=15880.000000 s hg38.chr3_KI270934v1_alt 12178 36 + 163458 CTCTTCCTGTCACCGACACTTCCTCAATATCCACAG s panTro5.chr3 2472039 36 - 202621043 CTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80089 36 - 190779 CTCTTCCTGTCACGGACACTTCCTCAGTATCCCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361690 36 - 192460366 CTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 48 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=17655.000000 s hg38.chr3_KI270934v1_alt 12214 41 + 163458 GTCACGCCACCCCTCTTCATGTCACCAGCCCTTCCTCAGCA s panTro5.chr3 2472075 41 - 202621043 GTCACGCCACCCCTCTTCCCGTCACCAGCCCTTCCTCAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80125 41 - 190779 GTGACACCACCTCTCTTCCTGTCACTAGCCCTTCCTCAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361678 41 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCA i macFas5.chr2 T 48 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=4296.000000 s hg38.chr3_KI270934v1_alt 12255 5 + 163458 TCCAC s panTro5.chr3 2472116 5 - 202621043 TCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80166 5 - 190779 TCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361719 5 - 192460366 TCCAC i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246462 5 - 17725628 TTCAC i saiBol1.JH378146 T 55 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=35119.000000 s hg38.chr3_KI270934v1_alt 12260 50 + 163458 CGGTCACGCCACCCCGCTTCCTGTCACCGACACTTCCTCAGCATCCACAG s panTro5.chr3 2472121 50 - 202621043 AGGTGACACCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80171 50 - 190779 AGGTGACACCACCCCTCTTCCTGTCACTGACGCTTCCTCAGCATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361676 50 - 192460366 AGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 56 s saiBol1.JH378146 17246467 50 - 17725628 AGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 C 0 T 55 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=5155.000000 s hg38.chr3_KI270934v1_alt 12310 26 + 163458 GTCACGCCAACCCTCTTCATGTCACC s panTro5.chr3 2472171 26 - 202621043 GTCACGCCACCCCTCTTACAGTCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80221 26 - 190779 GTCACGACACCTCTCTTCCTGTCACC i panPan2.chrUn_NW_014024201v1 C 0 T 240 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=2672.000000 s hg38.chr3_KI270934v1_alt 12336 14 + 163458 AGCCCTTCCTCAGC s panTro5.chr3 2472197 14 - 202621043 AGCCCGTCCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80007 14 - 190779 AAGCCTTCCTCAGT i panPan2.chrUn_NW_014024201v1 T 240 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=546.000000 s hg38.chr3_KI270934v1_alt 12350 1 + 163458 A s panTro5.chr3 2472211 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80021 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 56 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=32291.000000 s hg38.chr3_KI270934v1_alt 12351 47 + 163458 TCCACCGGTCACGCCACCCCGCTTCCTGTCACCGACACTTCCTCAGC s panTro5.chr3 2472212 47 - 202621043 TCCACAGGCCACGCCACCTCTCTTCCTGTCACCGACGCTTCCTCATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80022 47 - 190779 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 47 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGC i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246462 47 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGC i saiBol1.JH378146 T 55 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=7116.000000 s hg38.chr3_KI270934v1_alt 12398 8 + 163458 ATCCACAG s panTro5.chr3 2472259 8 - 202621043 ATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80069 8 - 190779 ATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 8 - 192460366 ATTCACAG i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 17246509 8 - 17725628 ATCCACAG i saiBol1.JH378146 C 0 T 48 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=32026.000000 s hg38.chr3_KI270934v1_alt 12406 48 + 163458 GTCACGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAG s panTro5.chr3 2472267 48 - 202621043 GTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80077 48 - 190779 GTCAGGCCACCCCTCTTCCTGTCACGGACACTTCCTCAGTATCCCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 s saiBol1.JH378146 17246469 48 - 17725628 GCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 T 48 T 55 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=8516.000000 s hg38.chr3_KI270934v1_alt 12454 40 + 163458 GTGACACCACGCCTCTTCCTGTCACTAGCCCTTCCTCAGC s panTro5.chr3 2472315 40 - 202621043 GTGACAGCACCCATCTTCCTGTCACCGACGCTTCCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80125 40 - 190779 GTGACACCACCTCTCTTCCTGTCACTAGCCCTTCCTCAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=546.000000 s hg38.chr3_KI270934v1_alt 12494 1 + 163458 A s panTro5.chr3 2472355 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80165 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 56 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=39416.000000 s hg38.chr3_KI270934v1_alt 12495 55 + 163458 TCCACAGGTCACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAG s panTro5.chr3 2472356 55 - 202621043 TCCACAGGTGACAGCACCCCTCTTCCTGTCACCGACGCTTCCTCACCATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80166 55 - 190779 TCCACAGGTGACACCACCCCTCTTCCTGTCACTGACGCTTCCTCAGCATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 T 55 T 48 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=33628.000000 s hg38.chr3_KI270934v1_alt 12550 48 + 163458 GTCAGGCCACCGCTCTTCCTGTCACCAGCACTTCCTCAGCATCCACAG s panTro5.chr3 2472411 48 - 202621043 GTCACGCCACCGCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80221 48 - 190779 GTCACGACACCTCTCTTCCTGTCACCGACATTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 56 s saiBol1.JH378146 17246469 48 - 17725628 GCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 T 48 T 55 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=43850.000000 s hg38.chr3_KI270934v1_alt 12598 192 + 163458 GTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAGGTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACGCCTCTTCCTGTCACTAGCCCTTCCTCAGCATCCACAGGTCACGCCACTCCTCTTCTTGTCACCGACGCTTCCTCAGCATCCACAG s panTro5.chr3 2472459 192 - 202621043 GTGACACCACCTCTCTTCCTGTCACCGACACTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGAAGCTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACGCTTCTTCAATATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80269 192 - 190779 GTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCAGCAGTGCTACCTCAGCTTCCACAG i panPan2.chrUn_NW_014024201v1 C 0 T 240 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=19231.000000 s hg38.chr3_KI270934v1_alt 12790 88 + 163458 GTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACGCCTCTTCCTGTCACTAGCCCTTCCTCAGC s panTro5.chr3 2472651 88 - 202621043 GTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80221 88 - 190779 GTCACGACACCTCTCTTCCTGTCACCGACATTTCCTCAGTATCCACAGGTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGT i panPan2.chrUn_NW_014024201v1 T 240 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=25830.000000 s hg38.chr3_KI270934v1_alt 12878 56 + 163458 ATCCACCGGTCATGCCACCTCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAG s panTro5.chr3 2472739 56 - 202621043 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACCCTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80309 56 - 190779 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 56 T 56 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=18780.000000 s hg38.chr3_KI270934v1_alt 12934 72 + 163458 GTGACACCACCTCTCTTCCTGTCACCGACACTTCCTCAGCATACACAGGTGACACCACCTCTCTTCCTGTCA s panTro5.chr3 2472795 72 - 202621043 GTGACACCACCCCTCTTCCTGTCACCGACCCTTCCTCAGTATCCACAGGTGACGCCACCCCTCTTCCTGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80365 72 - 190779 GTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCA i panPan2.chrUn_NW_014024201v1 C 0 T 144 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=26380.000000 s hg38.chr3_KI270934v1_alt 13006 112 + 163458 CCGACACTTCCTCATCATCCACAGGTGACACCACCCCTCTTCTTGTCACCGAGACTTCCTCAGTATCCACAGGTCACGCCACTCCTCTTCTTGTCACCGACGCTTCCTCAGC s panTro5.chr3 2472867 112 - 202621043 CAGACGCTTCCTCAGTATCCACAGGTCACGCCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTATACACAGGTCACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80293 112 - 190779 CCGACGCTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGT i panPan2.chrUn_NW_014024201v1 T 144 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=546.000000 s hg38.chr3_KI270934v1_alt 13118 1 + 163458 A s panTro5.chr3 2472979 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80405 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 56 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=36866.000000 s hg38.chr3_KI270934v1_alt 13119 55 + 163458 TCCACAGGTCACGCCACCCCTCTTCATGTCACCAGCCCTTCCTCAGCATCCACAG s panTro5.chr3 2472980 55 - 202621043 TCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80406 55 - 190779 TCCACAGGTGACACCACCCCTCTTCCTGTCAGCAGTGCTACCTCAGCTTCCACAG i panPan2.chrUn_NW_014024201v1 C 0 T 384 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 57 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 T 55 T 55 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=8308.000000 s hg38.chr3_KI270934v1_alt 13174 39 + 163458 GTGACACCACCCCTGTGCCTGTCACCGACACTTCCTCAG s panTro5.chr3 2473035 39 - 202621043 GTGACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80077 39 - 190779 GTCAGGCCACCCCTCTTCCTGTCACGGACACTTCCTCAG i panPan2.chrUn_NW_014024201v1 T 384 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=24028.000000 s hg38.chr3_KI270934v1_alt 13213 57 + 163458 TATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGGCCTTTCCTCAGCTTCCACAG s panTro5.chr3 2473074 57 - 202621043 TATCCACAGGTGACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTATTCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80116 57 - 190779 TATCCCCAGGTGACACCACCTCTCTTCCTGTCACTAGCCCTTCCTCAGCATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361669 57 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 57 T 56 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=8669.000000 s hg38.chr3_KI270934v1_alt 13270 40 + 163458 GTGACACCACCCGTCTTCCTGTCACCGACATTTCCTCGGC s panTro5.chr3 2473131 40 - 202621043 GTCACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80173 40 - 190779 GTGACACCACCCCTCTTCCTGTCACTGACGCTTCCTCAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=546.000000 s hg38.chr3_KI270934v1_alt 13310 1 + 163458 A s panTro5.chr3 2473171 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80213 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 56 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=38135.000000 s hg38.chr3_KI270934v1_alt 13311 55 + 163458 TCCACAGGTCAGGCCACCCCTCTTCCTGTCACCAACACTTCCTCAGTATCCACAG s panTro5.chr3 2473172 55 - 202621043 TCCACAGGTGACACCACCCCTCTTCCTGTCACTGATACTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80214 55 - 190779 TCCACAGGTCACGACACCTCTCTTCCTGTCACCGACATTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 T 55 T 55 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=8412.000000 s hg38.chr3_KI270934v1_alt 13366 40 + 163458 GTGACACCATGCCTCTTCCTGTCACTAGCCCTTCCTCAGC s panTro5.chr3 2473227 40 - 202621043 GTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80269 40 - 190779 GTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=546.000000 s hg38.chr3_KI270934v1_alt 13406 1 + 163458 A s panTro5.chr3 2473267 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80309 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 56 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=25781.000000 s hg38.chr3_KI270934v1_alt 13407 33 + 163458 TCCACAGGTCACGCCACCCCTCTTCCTGTCACC s panTro5.chr3 2473268 33 - 202621043 TCCACAGGTCACGCCAACCCTCTTCCTGTCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80310 33 - 190779 TCCACAGGTCACGCCACCCCTCTTCCTGTCACC i panPan2.chrUn_NW_014024201v1 C 0 I 69 s macFas5.chr2 192361671 33 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACG i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 17246462 33 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACC i saiBol1.JH378146 T 55 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=8252.000000 s hg38.chr3_KI270934v1_alt 13440 20 + 163458 AGCACTTCCTCAGCATCCAC s panTro5.chr3 2473301 20 - 202621043 GACGCTTCCTCAGTATCCAC i panTro5.chr3 C 0 C 0 s macFas5.chr2 192361704 20 - 192460366 GGTGCTTTCTCAGCATCCAC i macFas5.chr2 C 0 T 54 s saiBol1.JH378146 17246495 20 - 17725628 AGCACCTCCTCGGCATCCAC i saiBol1.JH378146 C 0 T 48 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 80343 69 - 190779 I a score=-137.000000 s hg38.chr3_KI270934v1_alt 13460 1 + 163458 C s panTro5.chr3 2473321 1 - 202621043 A i panTro5.chr3 C 0 C 0 s saiBol1.JH378146 17246467 1 - 17725628 A i saiBol1.JH378146 T 48 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361724 54 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 80343 69 - 190779 I a score=16686.000000 s hg38.chr3_KI270934v1_alt 13461 41 + 163458 GGTCACGCCACCCCTGTTCCTGTCACCAGCACTTCCTCAGC s panTro5.chr3 2473322 41 - 202621043 GGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80412 41 - 190779 GGTGACACCACCCCTCTTCCTGTCAGCAGTGCTACCTCAGC i panPan2.chrUn_NW_014024201v1 I 69 T 384 s saiBol1.JH378146 17246468 41 - 17725628 GGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGC i saiBol1.JH378146 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361724 54 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=910.000000 s hg38.chr3_KI270934v1_alt 13502 1 + 163458 A s panTro5.chr3 2473363 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80069 1 - 190779 A i panPan2.chrUn_NW_014024201v1 T 384 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 54 C 0 s saiBol1.JH378146 17246509 1 - 17725628 A i saiBol1.JH378146 C 0 T 48 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=37623.000000 s hg38.chr3_KI270934v1_alt 13503 55 + 163458 TCTACAGGTCACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAG s panTro5.chr3 2473364 55 - 202621043 TCCACAGGTGACACCACCCCTCTTCCTGTCACCAACACTTCCTCAGTATCCAGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80070 55 - 190779 TCCACAGGTCAGGCCACCCCTCTTCCTGTCACGGACACTTCCTCAGTATCCCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 T 48 T 55 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=20983.000000 s hg38.chr3_KI270934v1_alt 13558 88 + 163458 GTGACACCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCTACAGGTCACACCACCCCTCTTCATGTCACCATCCCTTCCTCAGC s panTro5.chr3 2473419 88 - 202621043 GTGACACCACGTCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAGGTGAGATCACCCCTCTTCCTGTCACCGACGCTTCCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80125 88 - 190779 GTGACACCACCTCTCTTCCTGTCACTAGCCCTTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACTGACGCTTCCTCAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=22642.000000 s hg38.chr3_KI270934v1_alt 13646 54 + 163458 ATCCACAGGTGACACCAGCACTCTTCCTGTCACCGGCGCTTCCTCAGCATCCAC s panTro5.chr3 2473507 54 - 202621043 ATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGTATCCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80213 54 - 190779 ATCCACAGGTCACGACACCTCTCTTCCTGTCACCGACATTTCCTCAGTATCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 54 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCAC i macFas5.chr2 T 56 T 55 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=37624.000000 s hg38.chr3_KI270934v1_alt 13700 170 + 163458 CGGTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAGTATCCACCGGTCACGCCACGCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCA-CCCCTCTTCCTGTCACCGACGCTTCCTCGGCATCCACAGGTCAGGCCACCCCTCTTCCTGTCA s panTro5.chr3 2473561 171 - 202621043 CGGTGACATCACGTCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAGGTGACATCACCCCTCTTCCTGTCACCGACGCTTCCTCCGTATCCACAGGTGACACCACCCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAGGTCACGTCACTCCTCTTCCTATCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80267 170 - 190779 AGGTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAGGTGACACCA-CCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCA i panPan2.chrUn_NW_014024201v1 C 0 T 192 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361724 55 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=12820.000000 s hg38.chr3_KI270934v1_alt 13870 55 + 163458 CCAGCCTTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCTTGTCACCGACGC s panTro5.chr3 2473732 55 - 202621043 CCGACACTTCCTCAGTATCCACAGGTCACGCCACCTCTCTTCCTGTCACTGACGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80245 55 - 190779 CCGACATTTCCTCAGTATCCACAGGTCACGCCAACCCTCTTCCTGTCACCGACGC i panPan2.chrUn_NW_014024201v1 T 192 T 288 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361724 55 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=2292.000000 s hg38.chr3_KI270934v1_alt 13925 8 + 163458 TTCCTCAG s panTro5.chr3 2473787 8 - 202621043 TTCCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80012 8 - 190779 TTCCTCAG i panPan2.chrUn_NW_014024201v1 T 288 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361724 55 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=1092.000000 s hg38.chr3_KI270934v1_alt 13933 2 + 163458 TA s panTro5.chr3 2473795 2 - 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80020 2 - 190779 TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361669 2 - 192460366 TA i macFas5.chr2 T 55 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=38324.000000 s hg38.chr3_KI270934v1_alt 13935 55 + 163458 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAGCATCCACA-G s panTro5.chr3 2473797 56 - 202621043 TCCACAGGTGACACCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80022 55 - 190779 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCACCATCCACA-G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACA-G i macFas5.chr2 C 0 T 57 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACA-G i saiBol1.JH378146 T 55 T 55 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=31793.000000 s hg38.chr3_KI270934v1_alt 13990 135 + 163458 GTGACACCACCCGTCTTCCTGTCACGGACACTTCCTCAGCATCCACAGGTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCTTGTCACCGACGCTTCCTCAG s panTro5.chr3 2473853 134 - 202621043 GTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAA-ATCCACAGGTCATGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGATGCTTCCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80077 135 - 190779 GTCAGGCCACCCCTCTTCCTGTCACGGACACTTCCTCAGTATCCCCAGGTGACACCACCTCTCTTCCTGTCACTAGCCCTTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACTGACGCTTCCTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=726.000000 s hg38.chr3_KI270934v1_alt 14125 2 + 163458 TA s panTro5.chr3 2473987 2 - 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80212 2 - 190779 CA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361669 2 - 192460366 TA i macFas5.chr2 T 57 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=41401.000000 s hg38.chr3_KI270934v1_alt 14127 55 + 163458 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAG s panTro5.chr3 2473989 55 - 202621043 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80214 55 - 190779 TCCACAGGTCACGACACCTCTCTTCCTGTCACCGACATTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 57 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 T 55 T 55 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=19598.000000 s hg38.chr3_KI270934v1_alt 14182 89 + 163458 GTGACACCACCCGTCTTCCTGTCACGGACACTTCCTCAGCATCCACAGGTCAGGCCACCCCTCTTCCTGTCACCATCCCTTCCTCATCA s panTro5.chr3 2474044 89 - 202621043 GTGACACCACCCCTCTTCCTGTCACCGACGCTCCCTCAGTATCCACAGGTGACACCACCCCTCTTTCTGTCACCGACGCTTCCTCAGTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80269 89 - 190779 GTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=20001.000000 s hg38.chr3_KI270934v1_alt 14271 46 + 163458 TCCTCAGGTCACACCACCCCTCTTCCTGTCACCAGCACTTCCTCAG s panTro5.chr3 2474133 46 - 202621043 TCCACAGGTGACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80358 46 - 190779 TCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 17246462 46 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGG i saiBol1.JH378146 T 55 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=7014.000000 s hg38.chr3_KI270934v1_alt 14317 9 + 163458 TATCTACAG s panTro5.chr3 2474179 9 - 202621043 TATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80404 9 - 190779 TATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361669 9 - 192460366 TATTCACAG i macFas5.chr2 T 57 C 0 s saiBol1.JH378146 17246508 9 - 17725628 CATCCACAG i saiBol1.JH378146 C 0 T 55 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=10486.000000 s hg38.chr3_KI270934v1_alt 14326 26 + 163458 GTCACGTCACCCCTCTTCATGTCACC s panTro5.chr3 2474188 26 - 202621043 GTCACACCACCCCTCTTCCTGTCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80413 26 - 190779 GTGACACCACCCCTCTTCCTGTCAGC i panPan2.chrUn_NW_014024201v1 C 0 T 432 s macFas5.chr2 192361678 26 - 192460366 GTCACGCTACCACTCTTCCTGTCACG i macFas5.chr2 C 0 C 0 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=4213.000000 s hg38.chr3_KI270934v1_alt 14352 14 + 163458 AGCCCTTCCTCAGC s panTro5.chr3 2474214 14 - 202621043 ATCTCTTCCTCAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80007 14 - 190779 AAGCCTTCCTCAGT i panPan2.chrUn_NW_014024201v1 T 432 C 0 s macFas5.chr2 192361704 14 - 192460366 GGTGCTTTCTCAGC i macFas5.chr2 C 0 T 48 e dasNov3.JH569502 2666904 0 - 6579706 C e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=422.000000 s hg38.chr3_KI270934v1_alt 14366 1 + 163458 A s panTro5.chr3 2474228 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80021 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 48 C 0 s dasNov3.JH569502 2666904 1 - 6579706 G i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=58136.000000 s hg38.chr3_KI270934v1_alt 14367 55 + 163458 TCCACAGGTCACGTCACCCCTC-TTCCTGTCACCAGCACTTCCTCAGCATCCACAG s panTro5.chr3 2474229 56 - 202621043 TCCACAGGTGACACCACCCCTCTTTCCTGTCACCATCTCTTCCTCAGCATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80022 55 - 190779 TCCACAGGTCACGCCACCCCTC-TTCCTGTCACCGACGCTTCCTCACCATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCACTC-TTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 48 s calJac3.chr17 73793833 55 + 74750902 TCCACAGGCCACGCGGCCCCTC-TTGCTGTCACCAGCACCGCCTCGGCACCCACAG i calJac3.chr17 T 55 T 56 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCCCGC-TTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 T 55 T 56 s dasNov3.JH569502 2666905 49 - 6579706 ---ACCACTCCCATGACCCCTG----CCGACACCAGCACTTCACAACCCACCACAA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=9068.000000 s hg38.chr3_KI270934v1_alt 14422 15 + 163458 GTCACGCCACCCCTC s panTro5.chr3 2474285 15 - 202621043 GTGACACCACCCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80077 15 - 190779 GTCAGGCCACCCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361678 15 - 192460366 GTCACGCTACCACTC i macFas5.chr2 T 48 C 0 s dasNov3.JH569502 2666954 15 - 6579706 GCCACGCCTTCCCTC i dasNov3.JH569502 C 0 I 736 e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 56 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=10633.000000 s hg38.chr3_KI270934v1_alt 14437 24 + 163458 TTCTTGTCACCGACGCTTCCTCAG s panTro5.chr3 2474300 24 - 202621043 TTCCTGTCACTGATACTTCCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80092 24 - 190779 TTCCTGTCACGGACACTTCCTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361693 24 - 192460366 TTCCTGTCACGGGTGCTTTCTCAG i macFas5.chr2 C 0 T 48 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 56 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=546.000000 s hg38.chr3_KI270934v1_alt 14461 1 + 163458 T s panTro5.chr3 2474324 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80116 1 - 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361669 1 - 192460366 T i macFas5.chr2 T 48 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 56 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=39225.000000 s hg38.chr3_KI270934v1_alt 14462 56 + 163458 GTCCACAGGTCACGCCACGCCTCTTCCTGTCACCGACGCTTCCTCAGCATCCACAG s panTro5.chr3 2474325 56 - 202621043 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80117 56 - 190779 ATCCCCAGGTGACACCACCTCTCTTCCTGTCACTAGCCCTTCCTCAGCATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 s saiBol1.JH378146 17246461 56 - 17725628 GTTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 T 56 T 55 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=33217.000000 s hg38.chr3_KI270934v1_alt 14518 136 + 163458 GTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAGGTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGC s panTro5.chr3 2474381 136 - 202621043 GTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTACCCACAGGTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80173 136 - 190779 GTGACACCACCCCTCTTCCTGTCACTGACGCTTCCTCAGCATCCACAGGTCACGACACCTCTCTTCCTGTCACCGACATTTCCTCAGTATCCACAGGTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=24618.000000 s hg38.chr3_KI270934v1_alt 14654 56 + 163458 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCATCCCTTCCTCAGTATCCACAG s panTro5.chr3 2474517 56 - 202621043 ATCCAGAGGTGACACCACGTCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80309 56 - 190779 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 56 T 56 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=1719.000000 s hg38.chr3_KI270934v1_alt 14710 6 + 163458 GTGACA s panTro5.chr3 2474573 6 - 202621043 GTGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80365 6 - 190779 GTGACA i panPan2.chrUn_NW_014024201v1 C 0 T 96 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=7107.000000 s hg38.chr3_KI270934v1_alt 14716 34 + 163458 CCATGCCTCTTCCTGTCACTAGCCCTTCCTCAGC s panTro5.chr3 2474579 34 - 202621043 TCACCCCTCTTCCTGTCACCGACGCTTCCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80275 34 - 190779 CCAACCCTCTTCCTGTCACCGACGCTTCCTCAGT i panPan2.chrUn_NW_014024201v1 T 96 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=24722.000000 s hg38.chr3_KI270934v1_alt 14750 56 + 163458 ATCCACAGGTCACGCCACCCCTCTTCCTGTTACCGGCCTTTCCTCAGCTTCCACAG s panTro5.chr3 2474613 56 - 202621043 ATCCACAGGTGACACCACCCCTCTTCCTGTCACCGATGCTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80309 56 - 190779 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 56 T 56 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=8423.000000 s hg38.chr3_KI270934v1_alt 14806 40 + 163458 GTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGC s panTro5.chr3 2474669 40 - 202621043 CTCTTGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80365 40 - 190779 GTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=5575.000000 s hg38.chr3_KI270934v1_alt 14846 14 + 163458 ATCCACACGTCACG s panTro5.chr3 2474709 14 - 202621043 ATCCACAGGTGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80405 14 - 190779 ATCCACAGGTGACA i panPan2.chrUn_NW_014024201v1 C 0 T 48 s macFas5.chr2 192361670 14 - 192460366 ATTCACAGGTCACG i macFas5.chr2 T 56 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=19655.000000 s hg38.chr3_KI270934v1_alt 14860 42 + 163458 CCACCCCTCTTCCTGTCACCGACACTTCCTCAGCTTCCACAG s panTro5.chr3 2474723 42 - 202621043 CCACCCCTCTTCCTGTCACTGACGCTTCCTCAGTATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80371 42 - 190779 CCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 T 48 C 0 s macFas5.chr2 192361684 42 - 192460366 CTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 57 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=5262.000000 s hg38.chr3_KI270934v1_alt 14902 24 + 163458 ATGACACCACCCGTCTTCCTGTCA s panTro5.chr3 2474765 24 - 202621043 GTCACGCCACCTCTCTTCCTGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80413 24 - 190779 GTGACACCACCCCTCTTCCTGTCA i panPan2.chrUn_NW_014024201v1 C 0 T 425 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=429.000000 s hg38.chr3_KI270934v1_alt 14926 7 + 163458 CCGACGT s panTro5.chr3 2474789 7 - 202621043 CCGATGC i panTro5.chr3 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 80437 425 - 190779 T a score=1909.000000 s hg38.chr3_KI270934v1_alt 14933 10 + 163458 TTCCTCGGCA s panTro5.chr3 2474796 10 - 202621043 TTCCTCACCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80012 10 - 190779 TTCCTCAGTA i panPan2.chrUn_NW_014024201v1 T 425 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=24755.000000 s hg38.chr3_KI270934v1_alt 14943 55 + 163458 TCCACAGGACATGCCACCCCTCTTCCTGTCACCAGCACTTCCTCAGCATCCACAG s panTro5.chr3 2474806 55 - 202621043 TCCACAGGTGACACCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80022 55 - 190779 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCACCATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 17246462 55 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 T 55 T 55 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=9177.000000 s hg38.chr3_KI270934v1_alt 14998 39 + 163458 GTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAG s panTro5.chr3 2474861 39 - 202621043 GTCACGCCACCCCTCTTCCTGTCACCGATGCTTCCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80077 39 - 190779 GTCAGGCCACCCCTCTTCCTGTCACGGACACTTCCTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=1092.000000 s hg38.chr3_KI270934v1_alt 15037 2 + 163458 TA s panTro5.chr3 2474900 2 - 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80116 2 - 190779 TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361669 2 - 192460366 TA i macFas5.chr2 T 57 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=32159.000000 s hg38.chr3_KI270934v1_alt 15039 48 + 163458 TCCACAGGTCACGCCACCTCTCTTCCTGTCACCAGCCGTTCCTCAGCA s panTro5.chr3 2474902 48 - 202621043 TCTACAGGTCACGCCACCCCTCTTCCTGTCACCAGCGCTTCCTCGGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80118 48 - 190779 TCCCCAGGTGACACCACCTCTCTTCCTGTCACTAGCCCTTCCTCAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 48 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCA i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 17246462 48 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCA i saiBol1.JH378146 T 55 T 48 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=6206.000000 s hg38.chr3_KI270934v1_alt 15087 7 + 163458 TCCACAG s panTro5.chr3 2474950 7 - 202621043 TCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80166 7 - 190779 TCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361719 7 - 192460366 TCCACAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246462 7 - 17725628 TTCACAG i saiBol1.JH378146 T 48 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=6573.000000 s hg38.chr3_KI270934v1_alt 15094 10 + 163458 GTCACGCCAC s panTro5.chr3 2474957 10 - 202621043 GTGACACCAC i panTro5.chr3 C 0 I 2051 s panPan2.chrUn_NW_014024201v1 80173 10 - 190779 GTGACACCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361678 10 - 192460366 GTCACGCTAC i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 17246469 10 - 17725628 GCCACGCCAC i saiBol1.JH378146 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=17203.000000 s hg38.chr3_KI270934v1_alt 15104 29 + 163458 CCCCCTTCCTGTCACCGACACTTCCTCAG s panTro5.chr3 2477018 28 - 202621043 CCCCTTTCCTGTCACCGAC-CTTCCTCAG i panTro5.chr3 I 2051 C 0 s panPan2.chrUn_NW_014024201v1 80183 29 - 190779 CCCTCTTCCTGTCACTGACGCTTCCTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361688 29 - 192460366 CACTCTTCCTGTCACGGGTGCTTTCTCAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246479 29 - 17725628 CCCGCTTCCTGTGACCAGCACCTCCTCGG i saiBol1.JH378146 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=1097.000000 s hg38.chr3_KI270934v1_alt 15133 2 + 163458 TA s panTro5.chr3 2477046 2 - 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80212 2 - 190779 CA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361669 2 - 192460366 TA i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 17246508 2 - 17725628 CA i saiBol1.JH378146 C 0 T 48 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=24933.000000 s hg38.chr3_KI270934v1_alt 15135 46 + 163458 TCCACAGGTC------------------------------------------ACGCCACCCCTCTTCCTGTCACCAGCACTTCCTCAG s panTro5.chr3 2477048 88 - 202621043 TCCACAGGTCACACCACCCCTCTCTCTACCATCTCTTCCTCAGCTCCAGGTGACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80214 46 - 190779 TCCACAGGTC------------------------------------------ACGACACCTCTCTTCCTGTCACCGACATTTCCTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361671 46 - 192460366 TTCACAGGTC------------------------------------------ACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246462 46 - 17725628 TTCACAGGCC------------------------------------------ACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGG i saiBol1.JH378146 T 48 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=6779.000000 s hg38.chr3_KI270934v1_alt 15181 9 + 163458 TATCTACAG s panTro5.chr3 2477136 9 - 202621043 CATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80260 9 - 190779 TATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361669 9 - 192460366 TATTCACAG i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 17246508 9 - 17725628 CATCCACAG i saiBol1.JH378146 C 0 T 48 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=26499.000000 s hg38.chr3_KI270934v1_alt 15190 41 + 163458 GTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGCA s panTro5.chr3 2477145 41 - 202621043 GTGACACCACCCCTCTTCCTGTCACTGATACTTCCTCAGTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80269 41 - 190779 GTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361678 41 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCA i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 17246469 41 - 17725628 GCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCA i saiBol1.JH378146 T 48 T 48 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=6206.000000 s hg38.chr3_KI270934v1_alt 15231 7 + 163458 TCCACAG s panTro5.chr3 2477186 7 - 202621043 TCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80310 7 - 190779 TCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361719 7 - 192460366 TCCACAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246462 7 - 17725628 TTCACAG i saiBol1.JH378146 T 48 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=36379.000000 s hg38.chr3_KI270934v1_alt 15238 48 + 163458 GTCACGCCACCCCTGTTCCTGTCACCAGCACTTCCTCAGCATCCACAG s panTro5.chr3 2477193 48 - 202621043 GTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80317 48 - 190779 GTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 57 s saiBol1.JH378146 17246469 48 - 17725628 GCCACGCCACCCCGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 C 0 T 56 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=9221.000000 s hg38.chr3_KI270934v1_alt 15286 39 + 163458 GTGACACCACCCCTCTTCCTGTCACCAATGCTTCCTCAT s panTro5.chr3 2477241 39 - 202621043 GTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80365 39 - 190779 GTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 56 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=15906.000000 s hg38.chr3_KI270934v1_alt 15325 33 + 163458 TATCCACAGGTCACGCCACCCCTCTTCATGTCA s panTro5.chr3 2477280 33 - 202621043 TATCCACAGGTCACGCCACCCCTCTTCCTGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80404 33 - 190779 TATCCACAGGTGACACCACCCCTCTTCCTGTCA i panPan2.chrUn_NW_014024201v1 C 0 T 192 s macFas5.chr2 192361669 33 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCA i macFas5.chr2 T 57 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 56 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=8605.000000 s hg38.chr3_KI270934v1_alt 15358 24 + 163458 CCAGCCCTTCCTCAGCATCCAGAG s panTro5.chr3 2477313 24 - 202621043 CCAGCCCTTCCTCAGTACCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80245 24 - 190779 CCGACATTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 T 192 C 0 s macFas5.chr2 192361702 24 - 192460366 CGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 48 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 56 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=19414.000000 s hg38.chr3_KI270934v1_alt 15382 46 + 163458 GTGACACCAGCACTCTTCCTGTCACCGATGCTTCCTCAGCATCCAC s panTro5.chr3 2477337 46 - 202621043 GTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGTATCCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80269 46 - 190779 GTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361678 46 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCAC i macFas5.chr2 T 48 T 49 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 56 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=29670.000000 s hg38.chr3_KI270934v1_alt 15428 122 + 163458 CGGTCACGCCACCCCTCTTCCTCTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACGCCTCTTCCTGTCACCGACACTTCCTCTGCATCCACAGGTCAGGCCACCCCTCTTCCTGTCA s panTro5.chr3 2477383 122 - 202621043 AGGTGACACCACGTCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAGGTGACATCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80315 122 - 190779 AGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCA i panPan2.chrUn_NW_014024201v1 C 0 T 96 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 56 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361724 49 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=14228.000000 s hg38.chr3_KI270934v1_alt 15550 69 + 163458 CCAGCCTTTCCTCAGTATCCACAGGTGACACCACGCCTCTTCCTGTCACCATCCCTTCCTCAGCATCCT s panTro5.chr3 2477505 69 - 202621043 CCGATGCTTCCTCAGTATCCACAGCTCTTGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80341 69 - 190779 CCAGCCCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCA i panPan2.chrUn_NW_014024201v1 T 96 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 56 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361724 49 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=13034.000000 s hg38.chr3_KI270934v1_alt 15619 27 + 163458 CAGGTCACACCACCTCTCTTCCTGTCA s panTro5.chr3 2477574 27 - 202621043 CAGGTGACACCACCCCTCTTCCTGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80410 27 - 190779 CAGGTGACACCACCCCTCTTCCTGTCA i panPan2.chrUn_NW_014024201v1 C 0 T 192 s macFas5.chr2 192361675 27 - 192460366 CAGGTCACGCTACCACTCTTCCTGTCA i macFas5.chr2 T 49 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 56 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=5866.000000 s hg38.chr3_KI270934v1_alt 15646 15 + 163458 CCGACGCTTCCTCAG s panTro5.chr3 2477601 15 - 202621043 CTGACGCTTCCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80245 15 - 190779 CCGACATTTCCTCAG i panPan2.chrUn_NW_014024201v1 T 192 C 0 s macFas5.chr2 192361702 15 - 192460366 CGGGTGCTTTCTCAG i macFas5.chr2 C 0 T 48 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 56 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=546.000000 s hg38.chr3_KI270934v1_alt 15661 1 + 163458 T s panTro5.chr3 2477616 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80260 1 - 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361669 1 - 192460366 T i macFas5.chr2 T 48 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 56 - 17725628 T e calJac3.chr17 73793888 56 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=19914.000000 s hg38.chr3_KI270934v1_alt 15662 20 + 163458 GTCCACAGGTCACGGCACCC s panTro5.chr3 2477617 20 - 202621043 ATCCACAGGTCACGCCACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80261 20 - 190779 ATCCACAGGTCACGCCAACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192361670 20 - 192460366 ATTCACAGGTCACGCTACCA i macFas5.chr2 C 0 C 0 s calJac3.chr17 73793832 20 + 74750902 GTCCACAGGCCACGCGGCCC i calJac3.chr17 T 56 C 0 s saiBol1.JH378146 17246461 20 - 17725628 GTTCACAGGCCACGCCACCC i saiBol1.JH378146 T 56 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=54505.000000 s hg38.chr3_KI270934v1_alt 15682 36 + 163458 CTCTTCCTGTCACCAGCACTTCCTCAGCATCCACAG s panTro5.chr3 2477637 36 - 202621043 CTCTTCCTGTCACCGATGCTTCCTCACCATCCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80281 36 - 190779 CTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2780546 36 - 123690457 CTCTTCCTGTCACCAGCGCTTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361690 36 - 192460366 CTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 s calJac3.chr17 73793852 36 + 74750902 CTCTTGCTGTCACCAGCACCGCCTCGGCACCCACAG i calJac3.chr17 C 0 T 55 s saiBol1.JH378146 17246481 36 - 17725628 CGCTTCCTGTGACCAGCACCTCCTCGGCATCCACAG i saiBol1.JH378146 C 0 T 55 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=19257.000000 s hg38.chr3_KI270934v1_alt 15718 40 + 163458 GTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGC s panTro5.chr3 2477673 40 - 202621043 GTGACACCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80317 40 - 190779 GTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2780582 40 - 123690457 GTCACGCCACCTCTCTTCCTGTCACCAGCGCTTCCTCAGC i nomLeu3.chr11 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac8.chr2 2290339 5328 - 204787373 I a score=910.000000 s hg38.chr3_KI270934v1_alt 15758 1 + 163458 A s panTro5.chr3 2477713 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80357 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2780622 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 56 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e saiBol1.JH378146 17246517 55 - 17725628 T e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=38110.000000 s hg38.chr3_KI270934v1_alt 15759 35 + 163458 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCGA s panTro5.chr3 2477714 35 - 202621043 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80358 35 - 190779 TCCACAGGTGACACCACCCCTCTTCCTGTCACCGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2780623 35 - 123690457 TCCACAGGTCACAGCACCTCTCTTCCTGTCACCAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361671 35 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGG i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 17246462 35 - 17725628 TTCACAGGCCACGCCACCCCGCTTCCTGTGACCAG i saiBol1.JH378146 T 55 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e otoGar3.GL873829 154601 19127 + 608964 M e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=26109.000000 s hg38.chr3_KI270934v1_alt 15794 20 + 163458 CACTTCCTCAGCATCCACAG s panTro5.chr3 2477749 20 - 202621043 TGCTTCCTCAGTATCTACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80393 20 - 190779 CGCTTCCTCAGTATCCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2780658 20 - 123690457 CACTTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361706 20 - 192460366 TGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246497 20 - 17725628 CACCTCCTCGGCATCCACAG i saiBol1.JH378146 C 0 T 48 s otoGar3.GL873829 174345 20 + 608964 CATTCTCTCATCAGCCCCTG i otoGar3.GL873829 M 19127 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=25968.000000 s hg38.chr3_KI270934v1_alt 15814 24 + 163458 GTCACGCCACCCCTCTTCCTGTCA s panTro5.chr3 2477769 24 - 202621043 GTCACGCCACCCCTCTTCCTGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80413 24 - 190779 GTGACACCACCCCTCTTCCTGTCA i panPan2.chrUn_NW_014024201v1 C 0 T 96 s nomLeu3.chr11 2780678 24 - 123690457 GTGACACCACCCCTCTTCCTGTCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 24 - 192460366 GTCACGCTACCACTCTTCCTGTCA i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 17246469 24 - 17725628 GCCACGCCACCCCGCTTCCTGTGA i saiBol1.JH378146 T 48 C 0 s otoGar3.GL873829 174365 24 + 608964 GTCCAGCCGTCACATGGAGTTCCA i otoGar3.GL873829 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=12077.000000 s hg38.chr3_KI270934v1_alt 15838 15 + 163458 CCAGCCTTTCCTCAG s panTro5.chr3 2477793 15 - 202621043 CCAGCGCTTCCTCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80341 15 - 190779 CCAGCCCTTCCTCAG i panPan2.chrUn_NW_014024201v1 T 96 C 0 s nomLeu3.chr11 2780702 15 - 123690457 CCAGCACTTCCTCAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361702 15 - 192460366 CGGGTGCTTTCTCAG i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 17246493 15 - 17725628 CCAGCACCTCCTCGG i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 174389 7 + 608964 ---GCACCCC----- i otoGar3.GL873829 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I e rheMac8.chr2 2290339 5328 - 204787373 I a score=2812.000000 s hg38.chr3_KI270934v1_alt 15853 2 + 163458 TA s panTro5.chr3 2477808 2 - 202621043 CA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80356 2 - 190779 TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2780717 2 - 123690457 CA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2295667 2 - 204787373 TA i rheMac8.chr2 I 5328 C 0 s macFas5.chr2 192361669 2 - 192460366 TA i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 17246508 2 - 17725628 CA i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 174396 1 + 608964 -A i otoGar3.GL873829 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e calJac3.chr17 73793888 55 + 74750902 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I a score=4491.000000 s hg38.chr3_KI270934v1_alt 15855 2 + 163458 TC s panTro5.chr3 2477810 2 - 202621043 TC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80358 2 - 190779 TC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2780719 2 - 123690457 TC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2295669 2 - 204787373 TT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192361671 2 - 192460366 TT i macFas5.chr2 C 0 C 0 s calJac3.chr17 73793833 2 + 74750902 TC i calJac3.chr17 T 55 C 0 s saiBol1.JH378146 17246510 2 - 17725628 TC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 174397 2 + 608964 TT i otoGar3.GL873829 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e macNem1.NW_012014355v1 19104260 620 - 19675229 I e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e colAng1.NW_012118932v1 7320603 620 - 7796314 I e manLeu1.NW_012102020v1 1364935 620 + 1977891 I e chlSab2.chr15 91319385 620 + 91754291 I e cerAty1.NW_012004056v1 16340714 620 - 16847902 I a score=43862.000000 s hg38.chr3_KI270934v1_alt 15857 5 + 163458 CACAG s panTro5.chr3 2477812 5 - 202621043 CACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80360 5 - 190779 CACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2780721 5 - 123690457 CACAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2295671 5 - 204787373 CACAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192361673 5 - 192460366 CACAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19104880 5 - 19675229 CACAG i macNem1.NW_012014355v1 I 620 C 0 s cerAty1.NW_012004056v1 16341334 5 - 16847902 CACAG i cerAty1.NW_012004056v1 I 620 C 0 s chlSab2.chr15 91320005 5 + 91754291 CACAG i chlSab2.chr15 I 620 C 0 s manLeu1.NW_012102020v1 1365555 5 + 1977891 CACAG i manLeu1.NW_012102020v1 I 620 C 0 s colAng1.NW_012118932v1 7321223 5 - 7796314 CACAG i colAng1.NW_012118932v1 I 620 C 0 s calJac3.chr17 73793835 5 + 74750902 CACAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17246512 5 - 17725628 CACAG i saiBol1.JH378146 C 0 T 7 s otoGar3.GL873829 174399 5 + 608964 CACAG i otoGar3.GL873829 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I a score=115895.000000 s hg38.chr3_KI270934v1_alt 15862 24 + 163458 GTCACGCCACCCCTCTTGCTGTCA s panTro5.chr3 2477817 24 - 202621043 GTGACACCACCCCTGTTCCTCTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80365 24 - 190779 GTGACACCACCCCTCTTCCTGTCA i panPan2.chrUn_NW_014024201v1 C 0 I 420 s nomLeu3.chr11 2780726 24 - 123690457 GTCACAGCACCTCTCTTCCTGTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2295676 24 - 204787373 GTCACGCTACCACTCTTCCTGTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192361678 24 - 192460366 GTCACGCTACCACTCTTCCTGTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19104885 24 - 19675229 GTCATGCCACCCCTCTTGCCGTCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16341339 24 - 16847902 GTCATGCCACGCCTCTTGCCGTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320010 24 + 91754291 GTCATGCCACCCCTCTTGCCGTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1365560 24 + 1977891 GTCATGCCACCCCTCTTGCCGTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321228 24 - 7796314 GTCATGCCACCCCTCTTGCTGTCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73793840 24 + 74750902 GCCACGCGGCCCCTCTTGCTGTCA i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 174404 24 + 608964 GTTACACTCCTCCTCTCTCTGCTA i otoGar3.GL873829 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e saiBol1.JH378146 17246517 7 - 17725628 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I a score=55704.000000 s hg38.chr3_KI270934v1_alt 15886 17 + 163458 GCAGTGCTACCTCAGCT s panTro5.chr3 2477841 17 - 202621043 GCAGTGCTACCTCAGCT i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2780750 17 - 123690457 GAAGCACTTCCTCAGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2295700 17 - 204787373 CCAGTGCTTTCCCAGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192361702 17 - 192460366 CGGGTGCTTTCTCAGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19104909 17 - 19675229 GCAGCGCATCCTCAGCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16341363 17 - 16847902 GCAGCGCATCCTCAGCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320034 17 + 91754291 GCAGCGCATCCTCAGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1365584 17 + 1977891 GCAGCGCATCCTCAGCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321252 17 - 7796314 CCAGCGCTTCCTCAGCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73793864 17 + 74750902 CCAGCACCGCCTCGGCA i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 174428 17 + 608964 CCAGCATGTCCACGCCA i otoGar3.GL873829 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e saiBol1.JH378146 17246517 7 - 17725628 T e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e panPan2.chrUn_NW_014024201v1 80389 420 - 190779 I a score=126001.000000 s hg38.chr3_KI270934v1_alt 15903 22 + 163458 TCCACAGTATCCTCGGACTCCC s panTro5.chr3 2477858 22 - 202621043 TCCACAGTATCCTCGGACTCCC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2780767 22 - 123690457 TCTACAGCATCCTCGGGCTCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2295717 22 - 204787373 TCCACAGTATCCTCGGGCTCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192361719 22 - 192460366 TCCACAGTATCCTCGGGCTCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19104926 22 - 19675229 TCCACAGTATCCTCGGGCTCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16341380 22 - 16847902 TCCACAGTATCCTCGGGCTCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320051 22 + 91754291 TCCACAGTATCCTCGGGCTCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1365601 22 + 1977891 TCCACAGTATCCTCGGGCTCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321269 22 - 7796314 TCCACAGTATCCTCGGGCTCCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73793881 22 + 74750902 CCCACAGTGTCCTCGGGCGCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17246510 22 - 17725628 TCCACAGTGTCCTCGGGGCCAG i saiBol1.JH378146 T 7 C 0 s otoGar3.GL873829 174445 22 + 608964 ACCACAGCATCTTCAGCCTCCT i otoGar3.GL873829 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e canFam3.chr33 2290930 1063 - 31377067 I e panPan2.chrUn_NW_014024201v1 80389 420 - 190779 I a score=539738.000000 s hg38.chr3_KI270934v1_alt 15925 113 + 163458 CTCTGAAGATGGAAACACCAGGTAGCTGCCAACTGCCTCG--CCTTTATGTCTCCCAGTGG-GCCCCTTGGCGGA------------ATTCAGCCTA-AGGAGTACCTGAG-AACACTGGTGCATTCGCA s panTro5.chr3 2477880 113 - 202621043 CTCTGAAGATGGAAACATCAGGTAGCTGCCATCTGCCTGG--TCTTTATCTCTCCCAGTGG-GCCCCTTGGCGGA------------ATTCAGCCTA-AGGAGTACCTGAG-ATCACTGGTGCATTCGCA i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2780789 113 - 123690457 CTCTGAAGAAGGAAACATCAGGTAACTGCCATCTGCCTCG--TCTTCATCTCTCCCAGTGG-GCCCCTTGGTGGA------------ATTCAGCCTC-AGGAGTACCTGAG-AACACTGGTGCATTCGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2295739 113 - 204787373 CTCTGAAGACGGAAACATCAGGTAGCTGCCATCTGCCTTG--TCTTCATCTCTCCCAGTGG-CCCCCTTGGCTGA------------ATTCAGCCTA-AGGAGTACTTGAG-AACACTGGCGCATTCACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192361741 113 - 192460366 CTCTGAAGACGGAAACATCAGGTAGCTGCCATCTGCCTTG--TCTTCATCTCTCCCAGTGG-CCCCCTTGGCTGA------------ATTCAGCCTA-AGGAGTACTTGAG-AACACTGGCACATTCACA i macFas5.chr2 C 0 I 147 s macNem1.NW_012014355v1 19104948 113 - 19675229 CTCTGAAGACGGAAACATCAGGTAGCTGCCATCTGCCTTG--TCTTCGTCTCTCCCAGTGG-CCCCCTTGGCTGA------------ATTCAGCCTA-AGGAGTACTTGAG-AACACTGGCGCATTCACG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16341402 113 - 16847902 CTCTGAAGACGGAAACATCAGGTAGCTGCCATCTGCCTTG--TCTTCGTCTCTCCCAGTGG-CCCCCTTGGCTGA------------ATTCAGCCTA-ACGAGTACTTGAG-AACACTGGCGCATTCACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320073 113 + 91754291 CTCTGAAGACGGAAACATCAGGTAGCTGCCATCTGCCTTG--TCTTCGTCTCTCCCAGTGG-CCCCCTTGGCTGA------------ATTCGGCCTA-AGGAGTACTGGAG-AACACTGGCGCATTCACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1365623 113 + 1977891 CTCTGAAGACGGAAACATCAGGTAGCTGCCATCTGCCTTG--TCTTCGTCTCTCCCAGTGG-CCCCCTTGGCTGA------------ATTCAGCCTA-ACGAGTACTTGAG-AACACTGGCGCATTCACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321291 113 - 7796314 CTCTGAAGACGGAAACATCAGGTAGCTGCCATCTGCCTTG--TCTTCGTCTCTCCCAGTGG-CCCCCTTGGCTGA------------ATTCAGCCTA-AGGAGTACTTGAG-AACACTGGTGCATTCACA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73793903 105 + 74750902 CTCGGAAGACGGAAGCACCTGGTAGCGGCCCCCTTCCTTG--CCTTCGTCTCTCCCACTGACCCCCCTAGGTTCA------------ATCCAGCCT----GAGTGCTTGCC-AGCACTGGTGAA------ i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17246532 115 - 17725628 CTCTGATGACGGAAACACCTGGTAGCTGCCCCCTTCCTTG--CCTTGGTCTCTCCCAGTGA-CCCCCTGGGTTCAGGGGAAGGCACCAAGGAGTCT----CAGC-CTTGAG-AGCATTGGTGAA------ i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 174467 94 + 608964 CTGTAAGGACCGCGACTTCAGGTAGGTGGAATGTCCCTTT--CT------TCTTATAGTGG-CCCCACTGGCTGG------------ATCCAGCCTT-A-AACTAGCTAA-----ATTAGCA-------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2291993 115 - 31377067 CTCTGAGCACTCAGACGTCAGGTAG--GCCGGGAGTCCGGGATATTTGTCTCTCACTGTGG-CCTCATTCGTTCA------------GTTCGACCTAGAGGAGGGCTTGAGCGATGATGGTGCGTTCGCC i canFam3.chr33 I 1063 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e panPan2.chrUn_NW_014024201v1 80389 420 - 190779 I a score=5353.000000 s hg38.chr3_KI270934v1_alt 16038 2 + 163458 TT- s panTro5.chr3 2477993 2 - 202621043 TT- i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2780902 2 - 123690457 TT- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2295852 2 - 204787373 TT- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192362001 2 - 192460366 TT- i macFas5.chr2 I 147 C 0 s macNem1.NW_012014355v1 19105061 2 - 19675229 TT- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16341515 2 - 16847902 TT- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320186 2 + 91754291 GT- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1365736 2 + 1977891 TT- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321404 2 - 7796314 TT- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73794008 2 + 74750902 TT- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17246647 2 - 17725628 TT- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 174561 2 + 608964 TC- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2292108 2 - 31377067 -TA i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e cebCap1.NW_016107444v1 6334167 124 + 6778120 I e panPan2.chrUn_NW_014024201v1 80389 420 - 190779 I a score=75464.000000 s hg38.chr3_KI270934v1_alt 16040 15 + 163458 ACCTGGTGGGGCCGT s panTro5.chr3 2477995 15 - 202621043 ACCTGGTGGGGCTGA i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2780904 15 - 123690457 ACCTGGTGTGGCTGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2295854 15 - 204787373 ATCCGGTGGGACTGA i rheMac8.chr2 C 0 I 147 s macFas5.chr2 192362003 15 - 192460366 ATCCGGTGGGACTGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105063 15 - 19675229 ATCCGGTGGGACTGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16341517 15 - 16847902 ATCTGGTGGGACTGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320188 15 + 91754291 ATCCGGTGGGACTGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1365738 15 + 1977891 ATCTGGTGGGACTGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321406 15 - 7796314 ATCTGGTGGGACTGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73794010 15 + 74750902 ACCTGGTGGGGCCGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17246649 15 - 17725628 ACCTGGTGGGGCTGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6334291 15 + 6778120 ACCTGGTGGGGCTGT i cebCap1.NW_016107444v1 I 124 C 0 s otoGar3.GL873829 174563 12 + 608964 ACCCAGCTAGGG--- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2292110 9 - 31377067 GTTTGAGGG------ i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e panPan2.chrUn_NW_014024201v1 80389 420 - 190779 I a score=387888.000000 s hg38.chr3_KI270934v1_alt 16055 57 + 163458 GTCAGGTCCCA-CAGGGGAGGAGGTG---A---TGGGTGTGGTGGGTGACAGGCTCACCCTCCT s panTro5.chr3 2478010 57 - 202621043 GTCAGGTCCCA-CAGGGGAGGAGGTG---A---TGGGTGTGGTGGGTGACAGGCTCACCCTCCT i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2780919 57 - 123690457 GTCAGGTCCCA-CAGGGGAGGAGGCG---A---TGGGTGTGGTGGGTGACAGGCTCACTCTCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2296016 57 - 204787373 GTCAGGTCCCA-CAGAGGAGGAGGTG---A---TGGGTGTGGTGGGTGACAGGCTCACCCCACT i rheMac8.chr2 I 147 C 0 s macFas5.chr2 192362018 57 - 192460366 GTCAGGTCCCA-CAGAGGAGGAGGTG---A---TGGGTGTGGTGGGTGACAGGCTCACCCCACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105078 57 - 19675229 GTCAGGTCCCA-CAGAGGAGGAGGTG---A---TGGGTGTGGTGGGTGACAGGCTCACCCCACT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16341532 57 - 16847902 GTAAGGTCCCA-CAGAGGAGGAGGTG---A---TGGGTGTGGTGGGTGACAGGCTCACCCCACT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320203 55 + 91754291 GTCAGGTCCCA-CAGAGGAGGAGGTG---A---TGGGTGTGGTGGGCGACAGGCTTACCCCA-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1365753 57 + 1977891 GTCAGGTCCCA-CAGAGGAGGAGGTG---A---TGGGTGTGGTGGGTGACAGGCTCACCCCACT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321421 57 - 7796314 GTCAGGTCCCA-CAGAGGAGGAGGTG---A---TGGGTGTGGTGGGTGACAGGCTCACCCCACT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73794025 55 + 74750902 GTTAGGGCCCA-CAGAGGAGGAGGCG---A---TGGGTGTGG-GGGTGACAGGC-CACCCTCCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17246664 56 - 17725628 GTTAGGTCCCA-CAGAGGAGGCAGCC---A---TGGGTGTGGTGGGCGACAGGC-CACCCTCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6334306 56 + 6778120 GTTAGGTCCCA-CAGCACAGGAGGCG---A---TGGGTGTGGTGGGTGACAGGC-CACCCTCCT i cebCap1.NW_016107444v1 C 0 I 379 s otoGar3.GL873829 174575 60 + 608964 GTTAGGTTCTACCAGAGGATGAAGTGGGTA---GGGGTGTGATGGGTGATAGGTCCCCATCCC- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2292119 58 - 31377067 --CAGTTCCAC-TAGAAGACGAATTG---AGTGCGAGTGTGGAGAGTGACAGGCGGACCATCCA i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e panPan2.chrUn_NW_014024201v1 80389 420 - 190779 I a score=76928.000000 s hg38.chr3_KI270934v1_alt 16112 14 + 163458 TTGTGCCGCAATCG s panTro5.chr3 2478067 14 - 202621043 TTGTGCCCCAATCG i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2780976 14 - 123690457 GTGTGCCCCAATCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2296073 14 - 204787373 CTCTGCCCCAGTCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192362075 14 - 192460366 CTCTGCCCCAGTCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105135 14 - 19675229 CTCTGCCCCAGTTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16341589 14 - 16847902 CTCTGCCCCAGTCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320258 14 + 91754291 CTCTGCCCCAGTCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1365810 14 + 1977891 CTCTGCCCCAGTCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321478 14 - 7796314 CTCTGCCCCAGTCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73794080 14 + 74750902 CCCTGCCCCCGTAG i calJac3.chr17 C 0 I 303 s saiBol1.JH378146 17246720 14 - 17725628 CCCTGCCCCCATAG i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 174635 14 + 608964 CTCTGCCCTAGCAG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2292177 14 - 31377067 CTCTACCCCAGAGG i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e cebCap1.NW_016107444v1 6334362 379 + 6778120 I e panPan2.chrUn_NW_014024201v1 80389 420 - 190779 I a score=67317.000000 s hg38.chr3_KI270934v1_alt 16126 15 + 163458 AAAAGCA----CTGATGTC s panTro5.chr3 2478081 15 - 202621043 AAAAGCA----CTGATGTC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2780990 15 - 123690457 AAAACCA----CTGATGTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2296087 15 - 204787373 AAAACCG----CTGATGTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192362089 15 - 192460366 AAAACTG----CTGATATC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105149 15 - 19675229 AAAACCG----CTGATGTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16341603 15 - 16847902 AAAACCG----CTGATATC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320272 15 + 91754291 AAACCCG----CTGATGTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1365824 15 + 1977891 AAAACCG----CTGATATT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321492 15 - 7796314 AAAACCG----CTGATGTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73794397 15 + 74750902 aaaaCCT----CTTATGTG i calJac3.chr17 I 303 C 0 s saiBol1.JH378146 17246734 15 - 17725628 AAAAGTG----CTTGTGTC i saiBol1.JH378146 C 0 I 308 s otoGar3.GL873829 174649 15 + 608964 AAACCTG----CTTGTGTA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2292191 16 - 31377067 ---ACTGTTTCTTATTGTC i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e cebCap1.NW_016107444v1 6334362 379 + 6778120 I e panPan2.chrUn_NW_014024201v1 80389 420 - 190779 I a score=224474.000000 s hg38.chr3_KI270934v1_alt 16141 39 + 163458 GAGAGTAGTTTGGATATGAGCAGGGGAGA----GACAAG-GAGT s panTro5.chr3 2478096 39 - 202621043 GAGAGTAGTTTGGATATGAGCAGAGGAGA----GACAAG-GAGT i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2781005 39 - 123690457 GAAAGTAGTCTGGATATGACCAGCGGATA----GACAAG-GAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2296102 39 - 204787373 GAGAGTGGTTTGGATATGACCAGTGGACA----GACAAG-GAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192362104 39 - 192460366 GAGAGTGGTTTGGATATGACCAGTGGACA----GACAAG-GAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105164 39 - 19675229 GAGAGTGGTTTGGATATGACCAGTGGACA----GACAAG-GATT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16341618 39 - 16847902 GAGAGTGGTTTGGATATGACCAGTGGACA----GACAAG-GAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320287 39 + 91754291 GAGAGTGGTTTGGATATGACCAGCGGACA----GACACG-GAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1365839 39 + 1977891 GAGAGTGGTTTGGATATGACCAGTGGACA----GACAAG-GAGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321507 39 - 7796314 GAGAGTGGTTTGGATGTGACCAGCGGATA----GACAAG-GAGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73794412 43 + 74750902 GAGAGTGCCTTGGACGTGACCAGTAGACAGATGGACAAG-GAGG i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 17247057 43 - 17725628 GAGAGTGGTTTGGATATGACCAGTAGGTAGATAGACAAG-GAGG i saiBol1.JH378146 I 308 I 1 s otoGar3.GL873829 174664 38 + 608964 GGGAGTGGTTTGGGTGCAACTAGCAG-CA----CACAAG-AAGG i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 2292207 40 - 31377067 GGGAGCAGTTTGGGTTTGAGCAGAAGATG----GATGAGAGAGT i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e cebCap1.NW_016107444v1 6334362 379 + 6778120 I e panPan2.chrUn_NW_014024201v1 80389 420 - 190779 I a score=35257.000000 s hg38.chr3_KI270934v1_alt 16180 5 + 163458 TTCCA s panTro5.chr3 2478135 5 - 202621043 TTCCA i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2781044 5 - 123690457 TTCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2296141 5 - 204787373 TTCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192362143 5 - 192460366 TTCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105203 5 - 19675229 TTCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16341657 5 - 16847902 TTCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320326 5 + 91754291 TTCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1365878 5 + 1977891 TTCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321546 5 - 7796314 TTCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73794456 5 + 74750902 TTCTA i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17247101 5 - 17725628 TTCTA i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 6334741 5 + 6778120 TTCTA i cebCap1.NW_016107444v1 I 379 C 0 s otoGar3.GL873829 174703 5 + 608964 TTCTA i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 2292247 3 - 31377067 TTC-- i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e panPan2.chrUn_NW_014024201v1 80389 420 - 190779 I a score=316014.000000 s hg38.chr3_KI270934v1_alt 16185 35 + 163458 GCTCCCTCTTCCAGCTCCTGATTTCTTTGAATCTC s panTro5.chr3 2478140 35 - 202621043 GCTCTCTCTTTCAGCTCCTGATTTCTTTGAATCTC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2781049 35 - 123690457 GCTCTCTCTTCCACCTCCTGATTTCTTTGAATCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2296146 35 - 204787373 ACTCTCTCTTCCAGCTCCTGATTTCTTTGAATCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192362148 35 - 192460366 ACTCTCTCTTCCAGCTCCTGATTTCTTTGAATCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105208 35 - 19675229 GCTCTCTCTTCCAGCTCCTGATTTCTTTGAATCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16341662 35 - 16847902 GCTCTCTCTTCCAGCTCCTGATTTCTTTGAATCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320331 34 + 91754291 GCTC-CTCTTCCAGCTCCTGATTTCTTTGAATCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1365883 35 + 1977891 GCTCTCTCTTCCAGCTCCTGATTTCTTTGAATCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321551 35 - 7796314 ACTCTCTCTTCCAGCTCCTGATTTCTTTGAATCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73794461 33 + 74750902 G--CTCTCTTCCAGCTCCTGATTTCTCTGAATCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247106 35 - 17725628 GCTCTCTCTTCCAGCTCCTGATTTCTTTGAATCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6334746 35 + 6778120 GCTCTCTCTTCCAGCTCCTGATTTCCTTGACTCTC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88354432 35 + 114275543 GCTCTCTCTTCCAGCTCCTGATTTCTTTGAATCTC i micMur3.chr1 N 0 I 481 s otoGar3.GL873829 174708 33 + 608964 --GCTCTCTTCCAGCTTCTGACTTCTCTGAATCTC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2292250 27 - 31377067 --------TTCCATCTCCTGAAATCTGTGACACTG i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2666969 736 - 6579706 I e panPan2.chrUn_NW_014024201v1 80389 420 - 190779 I a score=267645.000000 s hg38.chr3_KI270934v1_alt 16220 37 + 163458 TTTGACTCTCCTGTTTTGTTACTGTAAGAAACACCCC s panTro5.chr3 2478175 37 - 202621043 TTTGACTCTGCTGTTTCGTTACTGTAAGAAACACCCC i panTro5.chr3 C 0 I 1 s nomLeu3.chr11 2781084 37 - 123690457 TTCGACTCTGCTGTTCTCTTACTGTAAGAACCACCCC i nomLeu3.chr11 C 0 I 1 s rheMac8.chr2 2296181 37 - 204787373 TTTGACTCTGCTGTTCTCTTACTGTAAGAACCACCCC i rheMac8.chr2 C 0 I 1 s macFas5.chr2 192362183 37 - 192460366 TTTGACTCTGCTGTTCTCTTACTGTAAGAACCACCCC i macFas5.chr2 C 0 I 1 s macNem1.NW_012014355v1 19105243 37 - 19675229 TTTGACTCTGCTGTTCTCTTACTGTAAGAACCACCCC i macNem1.NW_012014355v1 C 0 I 1 s cerAty1.NW_012004056v1 16341697 37 - 16847902 TTTGACTCTGCTGTTCTCTTACTGTAAGAACCACCCC i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 91320365 37 + 91754291 TTTGACTCTGCTGTTCTCTTACTGTAAGAACCACCCC i chlSab2.chr15 C 0 I 1 s manLeu1.NW_012102020v1 1365918 37 + 1977891 TTTGACTCTGCTGTTCTCTTACTGTAAGAACCACCCC i manLeu1.NW_012102020v1 C 0 I 1 s colAng1.NW_012118932v1 7321586 37 - 7796314 TTTGACTCTGCTGTTCTCTTACTGTAAGAACCACCCC i colAng1.NW_012118932v1 C 0 I 1 s calJac3.chr17 73794494 34 + 74750902 TCTAACTCTGCTGTTCT---ACTGTAAGAGCCACCCC i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 17247141 37 - 17725628 TCTGACTCTGCTGTTCTCTGACTGTAAGAACCACCCC i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 6334781 37 + 6778120 TCTGACTCTGCGGTTCTCTTACTGTAAGAACCACCCC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 174741 33 + 608964 ----GCTCTCCTGTTCTCTTACTGTACAACCTACTCC i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 2292277 31 - 31377067 ------TTTGCTACTTTCAGATAATAAGACCCACTGC i canFam3.chr33 C 0 C 0 e micMur3.chr1 88354467 481 + 114275543 I e dasNov3.JH569502 2666969 736 - 6579706 I e panPan2.chrUn_NW_014024201v1 80389 420 - 190779 I a score=240673.000000 s hg38.chr3_KI270934v1_alt 16257 29 + 163458 -GCCTTGTCTTTTCACGTGTCCAGGAATGA s panTro5.chr3 2478213 29 - 202621043 -GCCTTCTCTTTTCACGTGTCCAGGAATGA i panTro5.chr3 I 1 C 0 s panPan2.chrUn_NW_014024201v1 80809 29 - 190779 -GCCTTCTCTTTTCACGTGTCCAGGAATGA i panPan2.chrUn_NW_014024201v1 I 420 C 0 s nomLeu3.chr11 2781122 29 - 123690457 -GCCTTCTCTTTTCACCTGTCCCGGGATGA i nomLeu3.chr11 I 1 C 0 s rheMac8.chr2 2296219 29 - 204787373 -GCCTTCTCTTTTCATGTGTCCAGGAATGA i rheMac8.chr2 I 1 I 4989 s macFas5.chr2 192362221 29 - 192460366 -GCCTTCTCTTTTCATGTGTCCAGGAATGA i macFas5.chr2 I 1 C 0 s macNem1.NW_012014355v1 19105281 29 - 19675229 -GCCTTCTCTTTTCACGTGTCCAGGAATGA i macNem1.NW_012014355v1 I 1 C 0 s cerAty1.NW_012004056v1 16341735 29 - 16847902 -GCCTTCTCTTTTCACGTGTCCAGGAATGA i cerAty1.NW_012004056v1 I 1 C 0 s chlSab2.chr15 91320403 29 + 91754291 -GCCTTCTCTTTTCACGTGTCCAGGAATGA i chlSab2.chr15 I 1 C 0 s manLeu1.NW_012102020v1 1365956 29 + 1977891 -GCCTTCTCTTTTCACGTGTCCAGGAATGA i manLeu1.NW_012102020v1 I 1 C 0 s colAng1.NW_012118932v1 7321624 29 - 7796314 -GCCTTCTCTTTTCACGTGTCCAGGAATGA i colAng1.NW_012118932v1 I 1 C 0 s calJac3.chr17 73794529 29 + 74750902 -GCCTTCTCTGTTCACATGTCCAGGAATGA i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17247179 29 - 17725628 -GTCTTCTCTGTTCACATGTCCAGGAATGA i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 6334818 29 + 6778120 -GCTTTCTCTGTCCCCATGTCCAGGAATGA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 174775 29 + 608964 -GTCCTCACTCCCTGCCTGGACAGCAAGGA i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 2292308 29 - 31377067 AATCTTCTCTCCT-ATATGCCCAGGAACCA i canFam3.chr33 C 0 C 0 e micMur3.chr1 88354467 481 + 114275543 I e dasNov3.JH569502 2666969 736 - 6579706 I a score=7085.000000 s hg38.chr3_KI270934v1_alt 16286 1 + 163458 C s panTro5.chr3 2478242 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80838 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2781151 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192362250 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105310 1 - 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16341764 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320432 1 + 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1365985 1 + 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321653 1 - 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73794558 1 + 74750902 T i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247208 1 - 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6334847 1 + 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 174804 1 + 608964 C i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2292337 1 - 31377067 C i canFam3.chr33 C 0 C 0 e micMur3.chr1 88354467 481 + 114275543 I e dasNov3.JH569502 2666969 736 - 6579706 I e rheMac8.chr2 2296248 4989 - 204787373 I a score=209311.000000 s hg38.chr3_KI270934v1_alt 16287 33 + 163458 AACACCGTCACTGAAGACAGACGGTGGGAGACG s panTro5.chr3 2478243 33 - 202621043 AACACCATCACTGAAGACAGACGGTGGGAGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80839 33 - 190779 AACACCATCACTGAAGACAGACGGTGGGAGACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3 33 + 55620 AACACCGTCACTGAAGACAGACGGTGGGAGACG i gorGor5.CYUI01001831v1 N 0 C 0 s nomLeu3.chr11 2781152 33 - 123690457 AACACCGTCACTGAAGACAGACGGTGGGGGACG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192362251 33 - 192460366 GACAACCTCAGTGAAGACAAGCAGCGAGAGTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105311 33 - 19675229 GACAACCTCAGTGAAGACAAGCAGCGAGAGTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16341765 33 - 16847902 GACAACCTCAGTGAAGACAGGCAGCGAGAGTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320433 33 + 91754291 GACAACGTCAGTGAAGACAGGCAGCGAGAGTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1365986 33 + 1977891 GACAACCTCAGTGAAGACAGGCAGCGAGAGTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321654 33 - 7796314 GACACCTTCAGTGAAGACAGATGGTGGGAGAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73794559 33 + 74750902 GACACCCTCCCTGAAGACCGACACTGGGAGAAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247209 33 - 17725628 GACACCCTCCCTTAAGACAGACAGTGGGAGGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6334848 33 + 6778120 GACAGCCTCCCTGAAGACAGACCGTGGGAGAAG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 174805 33 + 608964 CACAGCCCCACTGAGGACTGACAGTGGGAGAAG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2292338 33 - 31377067 GGTAACTTCCCTGGCGATAGGCAGCCAGAGTAG i canFam3.chr33 C 0 C 0 e micMur3.chr1 88354467 481 + 114275543 I e dasNov3.JH569502 2666969 736 - 6579706 I e rheMac8.chr2 2296248 4989 - 204787373 I a score=280453.000000 s hg38.chr3_KI270934v1_alt 16320 37 + 163458 CACAGCCACATCACCA---------------------------------------------------------------------------------------CCCCCCACAACCTCCCAGACC s panTro5.chr3 2478276 37 - 202621043 CACAGCCACATCACCA---------------------------------------------------------------------------------------CCCCCCACAACCTCCCAGACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80872 37 - 190779 CACAGCCACATCAGCA---------------------------------------------------------------------------------------CCCCCCACAACCTCCCAGACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36 37 + 55620 CACAGCCACATCACCA---------------------------------------------------------------------------------------CCCCCCACAACCTCCGAGACC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781185 37 - 123690457 CACAGCCACATCCCCA---------------------------------------------------------------------------------------CCCCCCACAACCTCCCAGACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301237 37 - 204787373 CACAGCCCCCTCACCA---------------------------------------------------------------------------------------CCCCTGACCACCTCCCAGGCC i rheMac8.chr2 I 4989 C 0 s macFas5.chr2 192362284 37 - 192460366 CCGAGTCACATCACTA---------------------------------------------------------------------------------------CCCCCAACAACCTCCAAGACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105344 37 - 19675229 CCGAGTCACATCACTa---------------------------------------------------------------------------------------cccccaacaacctcccagacc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16341798 37 - 16847902 CCGAGTCACATCACTA---------------------------------------------------------------------------------------CCCCCAACAACCTCCCAGACC i cerAty1.NW_012004056v1 C 0 I 45 s chlSab2.chr15 91320466 124 + 91754291 CCGAGTCACCTCACTACCCCCGACCACCTCCCAGACCGCCACAGCCACATCCACACCCCCAACGACCTCTGAGACCGCCACCTCCACCACAGCCCCATCCCCACCCCCGACCACCTCCCAGGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366019 73 + 1977891 CCGAGTCACATCACTACCCCCAGC------------------------------------------------AACCTCCAAGACCGCCACAGCCCCATCC---CCCCCGACCACCTCCCAGGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321687 37 - 7796314 CAGAGTCACATCACTA---------------------------------------------------------------------------------------CCCCCAACAACCTCCCAGACC i colAng1.NW_012118932v1 C 0 I 39 s calJac3.chr17 73794592 37 + 74750902 CACGGCCGCATCACTG---------------------------------------------------------------------------------------CCCCCAACAACCTCCCGAACC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247242 37 - 17725628 CACAGCCGCATCACTG---------------------------------------------------------------------------------------CCCCCAACAACCTCCCGAACC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6334881 37 + 6778120 CACAGCCGCATCACTG---------------------------------------------------------------------------------------CCCCCAGCGGCCTCCCGAACC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 174838 37 + 608964 CACAGCAACATCACTA---------------------------------------------------------------------------------------CCCTCCACAACCTCCCAGACC i otoGar3.GL873829 C 0 I 3 s canFam3.chr33 2292371 37 - 31377067 CACAACAACATCACTA---------------------------------------------------------------------------------------TCTTCAACAACCTCGCGGACG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2667705 37 - 6579706 CACATCCACATCGCCA---------------------------------------------------------------------------------------TCCACCGCAACCAGCCAAACC i dasNov3.JH569502 I 736 C 0 e micMur3.chr1 88354467 481 + 114275543 I a score=-2642.000000 s hg38.chr3_KI270934v1_alt 16357 1 + 163458 A s panTro5.chr3 2478313 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80909 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 73 1 + 55620 A i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781222 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301274 1 - 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192362321 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105381 1 - 19675229 g i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91320590 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366092 1 + 1977891 T i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321763 1 - 7796314 G i colAng1.NW_012118932v1 I 39 C 0 s calJac3.chr17 73794629 1 + 74750902 A i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247279 1 - 17725628 A i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6334918 1 + 6778120 A i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 174878 1 + 608964 C i otoGar3.GL873829 I 3 C 0 s canFam3.chr33 2292408 1 - 31377067 C i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2667742 1 - 6579706 A i dasNov3.JH569502 C 0 I 1352 e micMur3.chr1 88354467 481 + 114275543 I e cerAty1.NW_012004056v1 16341835 45 - 16847902 I a score=42895.000000 s hg38.chr3_KI270934v1_alt 16358 8 + 163458 TCATTTCC s panTro5.chr3 2478314 8 - 202621043 TCATTTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80910 8 - 190779 TCATTTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 74 8 + 55620 TCATTTCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781223 8 - 123690457 TCATTTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301275 8 - 204787373 CCACCTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192362322 8 - 192460366 CCACAGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105382 8 - 19675229 ccacagcc i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91320591 8 + 91754291 CCACCTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366093 8 + 1977891 CCACCTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321764 8 - 7796314 CCACCTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73794630 8 + 74750902 TCACCTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247280 8 - 17725628 TCACCTCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6334919 8 + 6778120 TCACCTCC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 174879 5 + 608964 TCACC--- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2292409 8 - 31377067 TCACTACT i canFam3.chr33 C 0 C 0 e micMur3.chr1 88354467 481 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e cerAty1.NW_012004056v1 16341835 45 - 16847902 I a score=5988.000000 s hg38.chr3_KI270934v1_alt 16366 2 + 163458 AC- s panTro5.chr3 2478322 2 - 202621043 AC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80918 2 - 190779 AC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 82 2 + 55620 AC- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781231 2 - 123690457 GC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301283 2 - 204787373 GC- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192362330 2 - 192460366 AC- i macFas5.chr2 C 0 M 14732 s macNem1.NW_012014355v1 19105390 2 - 19675229 cc- i macNem1.NW_012014355v1 C 0 I 39 s cerAty1.NW_012004056v1 16341880 2 - 16847902 GC- i cerAty1.NW_012004056v1 I 45 C 0 s chlSab2.chr15 91320599 2 + 91754291 GC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366101 2 + 1977891 GC- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321772 2 - 7796314 GC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73794638 2 + 74750902 GC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247288 2 - 17725628 GC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6334927 2 + 6778120 GC- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 174884 2 + 608964 TC- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2292417 2 - 31377067 -CT i canFam3.chr33 C 0 C 0 e micMur3.chr1 88354467 481 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I a score=621761.000000 s hg38.chr3_KI270934v1_alt 16368 100 + 163458 CATTCCCAGCACTGCCATGCACACC-CGCTCCACAG------CTGCCCCCATCCCCATCCT------GCCTGAGAGAGGTG----AGGCCATACAGGTGAGGCC------------------------------------------------------------------------------------------------------------------------TGTG-------------------------------------------CCTT----------------------------TTGAG s panTro5.chr3 2478324 100 - 202621043 CACTCCCAGCACTGCCATGCACACC-CGCTCCACAG------CTGCCCCCATCCCCATCCT------GCCTGAGAAAGGTG----AGGCCATACAGGCCAGGCC------------------------------------------------------------------------------------------------------------------------TGTG-------------------------------------------CCTT----------------------------TTGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80920 100 - 190779 CACTCCCAGCACTGCCATGCACACC-CGCTCCACAG------CTGCCCCCATCCCCATCCT------GCCTGAGAAAGGTG----AGGCCATACAGGCCAGGCC------------------------------------------------------------------------------------------------------------------------TGTG-------------------------------------------CCTT----------------------------TTGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 84 100 + 55620 CACTCCCAGCACTGCCATGCACACC-CGCTCCACAG------CTGCCCCCATCCCCATCCT------GCCTGAGAAAGGTG----AGGCCATACAGGCGAGGCC------------------------------------------------------------------------------------------------------------------------TGTG-------------------------------------------GCTT----------------------------TTGAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781233 104 - 123690457 CGCTCCCAGCACTGCCACGCACACC-CGCTCCACAG------CCGCCCCCATCCCCATCCC------GCCTGAGAAAGGTGAGTCAGGCCATACAGGCGAGGCC------------------------------------------------------------------------------------------------------------------------TGTG-------------------------------------------CCTT----------------------------TTGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301285 116 - 204787373 CACTCCCAGCACTGCCACGCACAGC-CGCTCCACAGCTGCCCCCGCCCCTGCCCCCGTCCCCGTCCCGCCTGAGACAGGTGAGTGAGGCCGTACAGGTGAGACT------------------------------------------------------------------------------------------------------------------------TGTG-------------------------------------------CGTT----------------------------TTGGG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105431 110 - 19675229 cactcccaGCACTGCCAGGCACAGC-CGCTCCACAG------CCGCCCCCGCCCCCGTCCCCGTCCCGCCTGAGAAAGGTGAGTGAGGCCGTACAGGTGAGACT------------------------------------------------------------------------------------------------------------------------TGTG-------------------------------------------CGTT----------------------------TTGGG i macNem1.NW_012014355v1 I 39 C 0 s cerAty1.NW_012004056v1 16341882 110 - 16847902 CACTCCCAGCACTGCCATGCACACC-CGCTCCACAG------CCGCCCCCGCCCCCGTCCCGGTCCAGCCTGAGAAAGGTGAGTGAGGCCGTACAGGTGAGACA------------------------------------------------------------------------------------------------------------------------TGTG-------------------------------------------CGTT----------------------------TTGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320601 104 + 91754291 CACTCCCAGCACTGCCACGCACACC-CGCTCCACAG------CTGCCCCCGTCCCCGTCCC------GTCTGAGAAAGGTGAGTGAGGCCGTGCAGGTGAGACA------------------------------------------------------------------------------------------------------------------------TGTG-------------------------------------------CGTT----------------------------TTGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366103 110 + 1977891 CACTCCCAGCACTGCCATGCACACC-CGCTCCACAG------CCGCCCCCGCCCCCGTCCCGGTCCAGCCTGAGAAAGGTGAGTGAGGCCGTACAGGTGAGACA------------------------------------------------------------------------------------------------------------------------TGTG-------------------------------------------CGTT----------------------------TTGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321774 104 - 7796314 CACTCCCAGCACTGCCACCCACAGC-CGCTCCACAG------CCGCCCCCATCCCCGTCCC------GCCTGAGAAAGGTGAGTGAGGCCGTACAGGTGAGACC------------------------------------------------------------------------------------------------------------------------CGTG-------------------------------------------CCTT----------------------------TTGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73794640 104 + 74750902 CATTCCCAACACTTCCACAGACACC-CGATCCACAG------CTGCCCCCGTCCCCATCCC------GTCTGAGAAAGGTGAGTCATGCTGTAGAGGTGTGCCC------------------------------------------------------------------------------------------------------------------------CATG-------------------------------------------CCTT----------------------------TTGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247290 104 - 17725628 CATTCCCAACACTTCCACAGACACC-CGATCCACAG------CTGCCCCCGTCCCCATCCC------ATCTGGGAAAGGTGAGTCATGCCGTGGAGGTGTGCCC------------------------------------------------------------------------------------------------------------------------CATG-------------------------------------------CCTT----------------------------TTGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6334929 89 + 6778120 CATTCCCAACAC----------------ATCCACAG------CTGCCCCCGTCCCCATCCC------GTCTGAGAAAGGTGAGTCATGCCATAGGGGTGTGCCC------------------------------------------------------------------------------------------------------------------------CACG-------------------------------------------CCTT----------------------------TTGAG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 174886 132 + 608964 CACCCCTAGCACGTCCACGGGCAGC-CAGTCAACAG------CTGTCCCAGTCCCTATCCA------GCCCGGGAGAGGTGAGTGGTGCAGCAGCAGTGAGACC------------------------------------------------------------------------------------------------------------------------CCTG-------------------------------------------CCCTGCAGTGGAGCTGGCTGTGGAGGTGAGCGTTGAG i otoGar3.GL873829 C 0 I 110 s canFam3.chr33 2292419 264 - 31377067 -CCCTCCAGCAG---CATCCACGGCACACTCAACGG------CTGCCCCAGTCCCCATCAA------GCCAGAGAAAGGTAAATGTCCCTGGAGAGGTGGGGTCCCTCCACTCTGGGATATAGAGATCTGAGCTAGATGTGGATGCTGTAGTTTTGGCAGCTCGATTAGATCTACCAGTGAGGGCTCTTTTGGGGGAGCAGGGGGAGCTGGTTCTGTGGGTATGTGTGCTGCCTCCTCTGGGCCATCGGTAGTCCAGCTGCTCCCCTACCCCCTT----------------------------TAGAG i canFam3.chr33 C 0 C 0 e micMur3.chr1 88354467 481 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macFas5.chr2 192362332 14732 - 192460366 M a score=794494.000000 s hg38.chr3_KI270934v1_alt 16468 105 + 163458 GGGTGATGTAACTGAAGGCTCCCTCTCAGCCTACT-TCCCACAGTCTCCGCTCTCTCGGGTGGGGAGGGCC-TTACCGAGGACAGGGACACAGCATCGGAGTCGCTC- s panTro5.chr3 2478424 105 - 202621043 GGGTGATGTAACTGAAGGCTCCCTCTCAGCCTACT-TCCCACAGTCTCTGCTCTCTCGGGTGGGGAGGGCC-TTACTGAGGACAGGGACACAGCATCGGAGTCGCTG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81020 105 - 190779 GGGTGATGTAACTGAAGGCTCCCTCTCAGCCTACT-TCCCACAGTCTCTGCTCTCTCGGGTGGGGAGGGCC-TTACTGAGGACAGGGACACAGCATCGGAGTCGCTG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 184 105 + 55620 GGGTGATGTAACTGAAGGCTCCCTCTCAGCCTACT-TCCCACAGTCTCTGCTCTCTCGGGTGGGGAGGGCC-TTACCGAGGACAGGGACACAGCATCGGAGTCGCTG- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781337 105 - 123690457 GGGCGACGTAACTGAAGGCTCCCGCTCAGCCTGCT-TCCCACAGTCTCTGCTCTCTCGGGTCGGGAGGGCC-TTACCAAGCACAGGAACACAACATCGGAGTCGCTG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301401 105 - 204787373 CGGTGACGTAACTGATGGCTCCCTCTCAGCCTGCT-TCCCACAGTCTCTGCTCTTTTGGGTCGGCAAGGCC-TTAGTGAGGACAGGGACACAGCATCGGAGTCGCTG- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105541 105 - 19675229 CGGTGACGTAACTGATGGCTCCCTCTCAGCCTGCT-TCCCACAGTCTCTGCTCTTTTGGGTCAGCAAGGCC-TTACTGAGGACAGGGACACAGCATCGGAGTCGCTG- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16341992 105 - 16847902 CGGTGACGTAACTGATGGCTCCCTCTCAGCCTGCT-TCCCACAGTCTCTGCTCTTTTGGGTCGGCAAGGCC-TTAGTGAGGACAGGGACACAGCATCAGAGTCGCTG- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320705 105 + 91754291 CGGTGACGTAACTGATGGCTCCCTCTCAGCCTGCT-TCCCACAGTCTTTGCTCTTTCGGGTCGGGAGGGCC-TTACTGAGGACAGGGACACAGCATCGGAGTCGCTG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366213 105 + 1977891 CGGTGACGTAACTGATGGCTCCCTCTCAGCCTGCT-TCCCACAGTCTCTGCTCTTTTGGGTCGGCAAGGCC-TTAGTGAGGACAGGGACACAGCATCAGAGTCGCTG- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321878 105 - 7796314 GGGTGATGTCACTGAAGGCTCCCTCTCAGCCTGCT-TCCCACAGTCTCTGCTCTTTCGGGTCGGGAGGGCC-TTACTGAGGACAGGGACACAGCATCGGAGTCACTG- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73794744 106 + 74750902 GGGTGACATAACTAAAGGTTGCTTCTCAGCCTGCTGGCCCATGGTCTCTGCGCTCTTGGGTGGGAAGGGCC-TTACCGAGGACAGGGAGACAGCATCAGAGTCGCTG- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247394 107 - 17725628 GGGTGACATAACTAAAGGTTCCTTCTCAGCCTGCTGGCCCATGGTCTCTGCTCTCTTGGGTGGGAAGGGCCTTTCCCGAGGACAGGGAGACTGCATCAGAGTCGCTG- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335018 105 + 6778120 GGGTGACATAACTAAAGGTTCCTTCTCAGCCTGCGGGCCCATGGTCTCTGCTCTCTTGGGT-GGAAGGGCC-TCACCGAGGACGGGGAGACAGCATCAGAGTCGCTG- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 175128 105 + 608964 GGGAGATGTCACTGAATAGTCAGTCTCAGCCTGCCTGCTCACACTCTCTGCCGTCTCAGGTGGGAAGGGCC--TGCGGGGGATAGTGAGACAGTACTATAATTGGGT- i otoGar3.GL873829 I 110 I 1 s canFam3.chr33 2292683 100 - 31377067 GGGAGATGGAACTGAAGACT-CGTCTCAGCCCGCCTGCTCATAG-----ACTCTCTCGGGTCGTCAACTCC--CACAGTGGGCTATGGGACAGCATCAGAGTTGGGTG i canFam3.chr33 C 0 C 0 e micMur3.chr1 88354467 481 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macFas5.chr2 192362332 14732 - 192460366 M a score=497835.000000 s hg38.chr3_KI270934v1_alt 16573 54 + 163458 CTGAGGGCTGGCTTTGTGCATGGCACTGGGCCAGGAGCTGGAGACAGAGAAATG s panTro5.chr3 2478529 54 - 202621043 CTGAGGGCTGGCTTTGTGCATGGCACTGGGCCAGGAGCTGGAGACAGAGAAATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81125 54 - 190779 CTGAGGGCTGGCTTTGTGCATGGCACTGGGCCAGGAGCTGGAGACAGAGAAATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 289 54 + 55620 CTGTGGGCTGGCTTTGTGCATGGCACTGGGCCAGGAGCTGGAGACAGAGAAATT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781442 54 - 123690457 CTGAGGGCTGGCTTTGTGCATGGCACTGGGCCAGGAGCTGGAGACAGAGAAATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301506 54 - 204787373 CTGAGGGCTGGCTTTGTGCATGGCACTGGGCCAGGGGCTGGAGACAGAGAAATG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105646 54 - 19675229 CTGAGGGCTGGCTTTGTGCATGGCACTGGGCCAGGGGCTGGAGACAGAGAAATG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342097 54 - 16847902 CTGAGGGCTGGCTTTGTGCATGGCACTGGGTCAGGGGCTGGAGACAGAGAAATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320810 54 + 91754291 CTGAGGGCTGGCTTTGTGCATGGCACTGGGCCAGGGGCTGGAGACAGAGAAATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366318 54 + 1977891 CTGAGGGCTGGCTTTGTGCATGGCACTGGGCCAGGGACTGGAGACAGAGAAATG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7321983 54 - 7796314 CTGAGGGCTGGCTTTGTGCATGGCACTGGGCCAGGGGCTGGAGACAGAGAAATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73794850 42 + 74750902 CTGAGGGCTGGCTTTGTGCCT------------GGAGCTAGAGACAGAGAAATG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247501 41 - 17725628 -TGTAGGCGGGCTTTGTGCAT------------GGAGCTGGAGACAGAGAAATG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335123 41 + 6778120 CTGAGGGCTGGCTTTGTGCAT------------GGAGCTGGAGA-AGAGAAATG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88354948 54 + 114275543 CTGAGGGCTGGCTTTGAGCATGGCACTGAGCTAGGAGCCGGACATAGAGAAATG i micMur3.chr1 I 481 I 161 s otoGar3.GL873829 175234 53 + 608964 ATGAGGGCTGGCATTGTACATGG-ACTGGGCTAAGTTCTGAAAGTAGAGAAACG i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 2292783 50 - 31377067 CGGAGGGCTGGCTCTGTACATGGCACCAGGCTGGGAGGTGG----AGAGAAGTG i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2667743 1352 - 6579706 I e macFas5.chr2 192362332 14732 - 192460366 M a score=709613.000000 s hg38.chr3_KI270934v1_alt 16627 89 + 163458 ACCCCAGTGCCATTCAGCAAGGGATAGATGGACGGT-C-CGGTAGCGGCGGTTAGAGGACTCATCCCAGGGTCTAAGTGCACACAATGGAA s panTro5.chr3 2478583 89 - 202621043 ACCCCAGTGCCATTCAGGAAGGGATAGATGGACGGT-C-TGGTAGAGGCGGTTAGAGGACTCATCCCAGGGTCTAAGTGCACACAATGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81179 89 - 190779 ACCCCAGTGCCATTCAGGAAGGGATAGATGGACGGT-C-TGGTAGAAGCGGTTAGAGGACTCATCCCAGGGTCTAAGTGCACACAATGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 343 88 + 55620 ACCCCAGTGCCATTCAGCAAGGGATAGATGGACGGT-C-TGGTAGAGGCGG-TAGAGGACTCATCCCAGGGTCTAAGTGCACACAATGGAA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781496 89 - 123690457 ACCTCGGTGCCATTCAGCAAGAGACAGATGGACTGT-C-TCATAGAGGCGGTTAGAGGGCTTATCCCAGGGTCTAAGTGCACACAATGGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301560 89 - 204787373 ACCCTGGTGCCATTCAGCAAGGGACAGATGGACTGT-C-TGGTAGAGGCGGTTAGAGGACTCATGCCAGGGTCTAAGCACACACAATGGAA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105700 89 - 19675229 ACCCTGGTGCCATTCAGCAAGGGACAGATGGACTGT-C-TGGTAGAGGCGGTTAGAGGACTCATGCCAGGGTCTAAGCACACACAATGGAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342151 89 - 16847902 ACCCTGGTGCCATTCAGCAAGGGACAGATGGACTGT-C-CGGTAGAGGTGGTTAGAGGACTCATGCCAGGGTCTAAGCGCACACAATGGAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320864 89 + 91754291 ACCCTGGTGCCATTCAGCAAGGGACAGATGGACTGT-C-TGGTAGAGGTGGTTAGAGGACTCGTGCCAGGGTCTAAGCGCACACAATGGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366372 89 + 1977891 ACCCTGGTGCCATTCAGCAAGGGACAGATGGACTGT-C-TGGTAGAGGCGGTTAGAGGACTCATGCCAGGGTCTAAGCACACACAATGGAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7322037 89 - 7796314 ACCCTGGTGCCATTCAGCAAGGGACAGACGGATTGT-C-TGGTAGAGGCGGTTAGAGGACTCATGCCAGGGTCTAAGCGCACACAATGGAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73794892 88 + 74750902 ACCCTAGTGCCATTCAGCAAGGGGCAGAT-CACTAT-C-TGGTAGAGGCAGTTAGAGGATTAATCCCAGGGCATAAGCACACACAATGGAA i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 17247542 88 - 17725628 AGCCCAGTGCCATTCAGCAAGGGACAGAT-CACTAT-C-TGGTAGAGGCAGTTAGAGGATTCGTTCTGGGATATAAGCACACACAATGGAA i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 6335164 88 + 6778120 AGCCCAGTGCCATTCAGCAAGGGACAGAT-CGCTGT-C-TGGTAGAGGCAGTTTGAGGATTAGTCCCGGGGTATAAGCGCACACAGTGGAA i cebCap1.NW_016107444v1 C 0 I 16 s otoGar3.GL873829 175287 90 + 608964 ATCCCAGTGCCATTCAGCAAGGGCCAGGTCAACTGTCC-TAATAGATAAAGTTGGGGGAATAAGCCCAGGTGTTAAATAGGCACAATGGAA i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 2292833 87 - 31377067 ACCACGGTACTGTTTAGTAAGAGACGGACCTGCTGC-CTTGATAGGTGCGATTAGAGGAATAAATGCAGGGTATTAG---ACACAATGGAA i canFam3.chr33 C 0 C 0 e micMur3.chr1 88355002 161 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macFas5.chr2 192362332 14732 - 192460366 M a score=68889.000000 s hg38.chr3_KI270934v1_alt 16716 31 + 163458 GGCCCTAAGGAATGC-----------------------------------------------AGAGCCGGGGATGGAG s panTro5.chr3 2478672 31 - 202621043 GGCCCTAAGGAATGC-----------------------------------------------AGAGCCGGCGATGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81268 31 - 190779 GGCCCTAAGGAATGC-----------------------------------------------AGAGCCGGCGATGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 431 31 + 55620 GGCCCTAAGGAATGC-----------------------------------------------AGAGCCGGGGATGGAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781585 31 - 123690457 GGCCCTGAGGAATGC-----------------------------------------------AGAGACAGGGATGGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301649 31 - 204787373 AGCCCTAAGGAAGGC-----------------------------------------------AGAGCCGGGGGATGGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105789 31 - 19675229 AGCCCTAAGGATGGC-----------------------------------------------AGAGCCGGGGGGTGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342240 31 - 16847902 AGCCCTAAGGAAGGC-----------------------------------------------AGAGCCGGGGGATGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320953 31 + 91754291 AGCCCTAAGGAAGGC-----------------------------------------------AGAGCCCGGGGGTGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366461 31 + 1977891 AGCCCTAAGGAAGGC-----------------------------------------------AGAGCCGGGGGATGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7322126 30 - 7796314 AGCTGTAAGGAAGGC-----------------------------------------------AGAGCCAGGGG-TGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73794981 9 + 74750902 ACGCCTCA-------------------------------------------------------------G-------- i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17247631 23 - 17725628 ATGCCTCAGGGACGT-----------------------------------------------GGACCAGG-------- i saiBol1.JH378146 I 1 C 0 s otoGar3.GL873829 175378 78 + 608964 GTCCCTAAGGGATGTGGAGGTGGGCTCAAAGTGAACAGGAGGCTGCCTGGCCGGAGTAAATAGGAGCCAGGGGAGGGT i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 2292920 78 - 31377067 GGTCCCAGGGGAGGTCGGGGTATGCTCAAGGCGAAGAGGCGGCTTCCTGGAAAGAATGAATAGGAGCTGGAGAAGGAG i canFam3.chr33 C 0 C 0 e micMur3.chr1 88355002 161 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e cebCap1.NW_016107444v1 6335252 16 + 6778120 I e macFas5.chr2 192362332 14732 - 192460366 M a score=72974.000000 s hg38.chr3_KI270934v1_alt 16747 10 + 163458 GAGCACCCCA s panTro5.chr3 2478703 10 - 202621043 GAGCACCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81299 10 - 190779 GAGCACCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 462 10 + 55620 GAGCACCCCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781616 10 - 123690457 GAGCACCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301680 10 - 204787373 GAGCACCCCG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105820 10 - 19675229 GAGCACCCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342271 10 - 16847902 GAGCACCCCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91320984 10 + 91754291 GAGCACCCCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366492 10 + 1977891 GAGCACCCCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7322156 10 - 7796314 GAGCACCCTG i colAng1.NW_012118932v1 C 0 C 0 s micMur3.chr1 88355163 10 + 114275543 GAGCACCCCA i micMur3.chr1 I 161 C 0 s otoGar3.GL873829 175456 10 + 608964 GGGTACCCCA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2292998 10 - 31377067 AAGCATCCCA i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2667743 1352 - 6579706 I e saiBol1.JH378146 17247654 0 - 17725628 C e calJac3.chr17 73794990 0 + 74750902 C e cebCap1.NW_016107444v1 6335252 16 + 6778120 I e macFas5.chr2 192362332 14732 - 192460366 M a score=162621.000000 s hg38.chr3_KI270934v1_alt 16757 14 + 163458 GGCAGGGAGGAGGG s panTro5.chr3 2478713 14 - 202621043 GGCAGGGAGGAGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81309 14 - 190779 GGTAGGGAGGAGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 472 14 + 55620 GGCAGGGAGGAGGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781626 14 - 123690457 AGCAGGGAGGAGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301690 14 - 204787373 GGTAGGGAGGAGGG i rheMac8.chr2 C 0 I 30 s macNem1.NW_012014355v1 19105830 14 - 19675229 GGCAGGGAGGAGGG i macNem1.NW_012014355v1 C 0 I 13 s cerAty1.NW_012004056v1 16342281 14 - 16847902 ggcagggaggaggg i cerAty1.NW_012004056v1 C 0 I 13 s chlSab2.chr15 91320994 14 + 91754291 GGCAGGGAGGAGGG i chlSab2.chr15 C 0 I 13 s manLeu1.NW_012102020v1 1366502 14 + 1977891 GGCAGAGAGGAGGG i manLeu1.NW_012102020v1 C 0 I 13 s colAng1.NW_012118932v1 7322166 14 - 7796314 GGCAGGGAGGAGGG i colAng1.NW_012118932v1 C 0 I 17 s calJac3.chr17 73794990 14 + 74750902 GGCAGGGAGGAGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247654 14 - 17725628 GGCCGGGAGGAGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335268 14 + 6778120 GGCGGGGAGGAGGG i cebCap1.NW_016107444v1 I 16 C 0 s micMur3.chr1 88355173 14 + 114275543 GGCAGGGAGGAGGG i micMur3.chr1 C 0 I 64 s otoGar3.GL873829 175466 14 + 608964 GGCAGGGAGGAGGG i otoGar3.GL873829 C 0 I 2 s canFam3.chr33 2293008 14 - 31377067 AGGAGGCAAGAGGG i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2667743 1352 - 6579706 I e macFas5.chr2 192362332 14732 - 192460366 M a score=25789.000000 s hg38.chr3_KI270934v1_alt 16771 5 + 163458 CGGGA s panTro5.chr3 2478727 5 - 202621043 CGGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81323 5 - 190779 CGGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 486 5 + 55620 CGGGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781640 5 - 123690457 CAGGA i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19105857 5 - 19675229 CGGGA i macNem1.NW_012014355v1 I 13 C 0 s cerAty1.NW_012004056v1 16342308 5 - 16847902 cggga i cerAty1.NW_012004056v1 I 13 C 0 s chlSab2.chr15 91321021 5 + 91754291 CGGGA i chlSab2.chr15 I 13 C 0 s manLeu1.NW_012102020v1 1366529 5 + 1977891 CGGGA i manLeu1.NW_012102020v1 I 13 C 0 s calJac3.chr17 73795004 5 + 74750902 CGGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247668 5 - 17725628 TGGGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335282 5 + 6778120 CGGGA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 175482 3 + 608964 CGA-- i otoGar3.GL873829 I 2 C 0 s canFam3.chr33 2293022 5 - 31377067 CTTGA i canFam3.chr33 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e colAng1.NW_012118932v1 7322180 17 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I a score=39882.000000 s hg38.chr3_KI270934v1_alt 16776 5 + 163458 ACAGC s panTro5.chr3 2478732 5 - 202621043 ACAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81328 5 - 190779 ACAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 491 5 + 55620 ACAGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781645 5 - 123690457 ACAGC i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19105862 5 - 19675229 ACAGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342313 5 - 16847902 ACAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321026 5 + 91754291 ACAGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366534 5 + 1977891 ACAGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7322197 5 - 7796314 ACAGC i colAng1.NW_012118932v1 I 17 C 0 s calJac3.chr17 73795009 5 + 74750902 ACAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247673 5 - 17725628 ACAGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335287 5 + 6778120 ACAGC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 175485 5 + 608964 ACCTC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2293027 5 - 31377067 AGAAC i canFam3.chr33 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I a score=118407.000000 s hg38.chr3_KI270934v1_alt 16781 17 + 163458 TGGAACAAAGGTGTGGA s panTro5.chr3 2478737 17 - 202621043 TGGAACAAAGGTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81333 17 - 190779 TGGAACAAAGGTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 496 17 + 55620 TGGAACAAAGGTGTGGA i gorGor5.CYUI01001831v1 C 0 C 0 s macNem1.NW_012014355v1 19105867 17 - 19675229 TGGAACAAAAGTGCGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342318 17 - 16847902 TGGAACAAAAGTGCGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321031 17 + 91754291 TGGAACAAAAGTGCGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366539 17 + 1977891 TGGAACAAAAGTGCGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7322202 17 - 7796314 TGGAACAAAAGTGCGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73795014 17 + 74750902 TGGAAGGAAGGTGTGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247678 17 - 17725628 TGGAACAAAGGTGTGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335292 17 + 6778120 TGGAACAAAGGTGTGGA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 175490 17 + 608964 TCGAACAAAGGTCCAGA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2293032 17 - 31377067 TGGAATAAAAGTGTAGA i canFam3.chr33 C 0 I 17 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=22698.000000 s hg38.chr3_KI270934v1_alt 16798 3 + 163458 AGG s panTro5.chr3 2478754 3 - 202621043 AGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81350 3 - 190779 AGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 513 3 + 55620 AGG i gorGor5.CYUI01001831v1 C 0 C 0 s macNem1.NW_012014355v1 19105884 3 - 19675229 AGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342335 3 - 16847902 AGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321048 3 + 91754291 AGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366556 3 + 1977891 AGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7322219 3 - 7796314 AGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73795031 3 + 74750902 AGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247695 3 - 17725628 AGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335309 3 + 6778120 AGG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 175507 3 + 608964 AGG i otoGar3.GL873829 C 0 I 2 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e canFam3.chr33 2293049 17 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=26158.000000 s hg38.chr3_KI270934v1_alt 16801 5 + 163458 TATGG s panTro5.chr3 2478757 5 - 202621043 TATGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81353 5 - 190779 TATGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 516 5 + 55620 TATGA i gorGor5.CYUI01001831v1 C 0 C 0 s macNem1.NW_012014355v1 19105887 5 - 19675229 TATGG i macNem1.NW_012014355v1 C 0 I 2 s cerAty1.NW_012004056v1 16342338 5 - 16847902 TATGG i cerAty1.NW_012004056v1 C 0 I 2 s chlSab2.chr15 91321051 5 + 91754291 TATGG i chlSab2.chr15 C 0 I 2 s manLeu1.NW_012102020v1 1366559 5 + 1977891 TATGG i manLeu1.NW_012102020v1 C 0 I 2 s colAng1.NW_012118932v1 7322222 5 - 7796314 TATGG i colAng1.NW_012118932v1 C 0 I 5 s calJac3.chr17 73795034 5 + 74750902 CATGG i calJac3.chr17 C 0 I 3 s saiBol1.JH378146 17247698 5 - 17725628 TATGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335312 5 + 6778120 CATGG i cebCap1.NW_016107444v1 C 0 I 13 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=1549.000000 s hg38.chr3_KI270934v1_alt 16806 5 + 163458 --GTGTG s panTro5.chr3 2478762 5 - 202621043 --GTGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81358 5 - 190779 --GTGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 521 5 + 55620 --GTGTA i gorGor5.CYUI01001831v1 C 0 C 0 s macNem1.NW_012014355v1 19105894 3 - 19675229 --GTG-- i macNem1.NW_012014355v1 I 2 C 0 s cerAty1.NW_012004056v1 16342345 3 - 16847902 --GTG-- i cerAty1.NW_012004056v1 I 2 C 0 s chlSab2.chr15 91321058 3 + 91754291 --GTG-- i chlSab2.chr15 I 2 C 0 s manLeu1.NW_012102020v1 1366566 3 + 1977891 --GTG-- i manLeu1.NW_012102020v1 I 2 C 0 s saiBol1.JH378146 17247703 5 - 17725628 CAGTG-- i saiBol1.JH378146 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=3575.000000 s hg38.chr3_KI270934v1_alt 16811 3 + 163458 GAA s panTro5.chr3 2478767 3 - 202621043 GAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81363 3 - 190779 GAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 526 3 + 55620 GAA i gorGor5.CYUI01001831v1 C 0 C 0 s manLeu1.NW_012102020v1 1366569 3 + 1977891 GAA i manLeu1.NW_012102020v1 C 0 I 6 s saiBol1.JH378146 17247708 3 - 17725628 AAA i saiBol1.JH378146 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=3296.000000 s hg38.chr3_KI270934v1_alt 16814 4 + 163458 GGTA s panTro5.chr3 2478770 4 - 202621043 GGTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81366 4 - 190779 GGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 529 4 + 55620 GGTA i gorGor5.CYUI01001831v1 C 0 C 0 s saiBol1.JH378146 17247711 4 - 17725628 AGTA i saiBol1.JH378146 C 0 I 1 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=20245.000000 s hg38.chr3_KI270934v1_alt 16818 46 + 163458 TGGGTGTGGAAGGTATGGCTGTGGAAGGTATGGGTGTGGAAGGTAT s panTro5.chr3 2478774 46 - 202621043 AGGGTGTGGAAGTTATGAGTGTGGAAGGTATGAGTGTGGAAGGTAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81370 46 - 190779 TGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGCCTTGGAAGGTAT i panPan2.chrUn_NW_014024201v1 C 0 T 45 s gorGor5.CYUI01001831v1 533 46 + 55620 TGGGTGTGGAAGGTATGGCCGTGGAAGGTACGAGTGTGGAAGGTAT i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=36583.000000 s hg38.chr3_KI270934v1_alt 16864 76 + 163458 GGGTGTGGAAGGTATGGGTGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATG s panTro5.chr3 2478820 76 - 202621043 GAGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGCCGTGGAAGGTATGGGTGTGGAAGGTAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81371 76 - 190779 GGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGCCTTGGAAGGTATGGCCGTGGAAGATATGGCCGTGGAAGGTATG i panPan2.chrUn_NW_014024201v1 T 45 T 105 s gorGor5.CYUI01001831v1 579 76 + 55620 GGGTGTGGAAGGTATGGGTGTGGAAGATATGGGTGTGGAAGCTATGGCCGTGGAAGGTATGGGTGTGGAAGGTATG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=16383.000000 s hg38.chr3_KI270934v1_alt 16940 31 + 163458 GGTGTGGAAGGTATGGGTGTGGAAGGTATGG s panTro5.chr3 2478896 31 - 202621043 GGTGTGGAAGGTATGGGTGTGGAAGGTATGG i panTro5.chr3 C 0 T 45 s panPan2.chrUn_NW_014024201v1 81342 31 - 190779 GGTGTGGAAGGTATGAGTGTGGAAGGTATGG i panPan2.chrUn_NW_014024201v1 T 105 C 0 s gorGor5.CYUI01001831v1 655 31 + 55620 GATGTGGAAGGTATGGGTGTGGAAGCTATGG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=22249.000000 s hg38.chr3_KI270934v1_alt 16971 45 + 163458 GTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGGTATGG s panTro5.chr3 2478882 45 - 202621043 GTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGGTATGG i panTro5.chr3 T 45 T 180 s panPan2.chrUn_NW_014024201v1 81373 45 - 190779 GTGTGGAAGGTAAGGGTGTGGAAGGTATGGCCTTGGAAGGTATGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 686 45 + 55620 CCGTGGAAGGTATGGGTGTGGAAGGTATGGATGTGGAAGGTATGG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=-75.000000 s hg38.chr3_KI270934v1_alt 17016 1 + 163458 G s panTro5.chr3 2478747 1 - 202621043 G i panTro5.chr3 T 180 C 0 s panPan2.chrUn_NW_014024201v1 81418 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 731 1 + 55620 G i gorGor5.CYUI01001831v1 C 0 I 222 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=6063.000000 s hg38.chr3_KI270934v1_alt 17017 12 + 163458 TGTGGAAGGTAT s panTro5.chr3 2478748 12 - 202621043 TGTGGAAGGTAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81419 12 - 190779 CGTGGAAGATAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 954 12 + 55620 TGTGGAAGGTAT i gorGor5.CYUI01001831v1 I 222 I 134 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=21488.000000 s hg38.chr3_KI270934v1_alt 17029 47 + 163458 GGGTGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATGG s panTro5.chr3 2478760 47 - 202621043 GGGTGTGGAAGGTAAGGGTGTGGAAGTTATGAGTGTGGAAGGTATGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81431 47 - 190779 GGCCGTGGAAGGTATGGGTGTGGAAGGTACGAGTGTGGTAGGTATGG i panPan2.chrUn_NW_014024201v1 C 0 T 136 s gorGor5.CYUI01001831v1 1100 47 + 55620 GGGTGTGGAAGGTATGGATGTGGAAGGTATGGATGTGGAAAGTATGG i gorGor5.CYUI01001831v1 I 134 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=3890.000000 s hg38.chr3_KI270934v1_alt 17076 16 + 163458 GTGTGGAAGGTATGAC s panTro5.chr3 2478807 16 - 202621043 GTGTGGAAGGTATGAG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 1147 16 + 55620 GTGTGGAAGGTATGGG i gorGor5.CYUI01001831v1 C 0 T 431 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 81478 136 - 190779 T a score=3449.000000 s hg38.chr3_KI270934v1_alt 17092 13 + 163458 TGTGGAAGGTATG s panTro5.chr3 2478823 13 - 202621043 TGTGGAAGGTATG i panTro5.chr3 C 0 T 90 s gorGor5.CYUI01001831v1 732 13 + 55620 TGTGAAAGGTATG i gorGor5.CYUI01001831v1 T 431 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 81478 136 - 190779 T a score=8194.000000 s hg38.chr3_KI270934v1_alt 17105 30 + 163458 GGTGTGGAAGGTATGGGTGTGGAAGGTATG s panTro5.chr3 2478746 30 - 202621043 GGTGTGGAAGGTATGGGTGTGGAAGGTAAG i panTro5.chr3 T 90 C 0 s gorGor5.CYUI01001831v1 745 30 + 55620 GGTGTGGAAGGTATGGGTGTGGAAGGTATG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 81478 136 - 190779 T a score=35858.000000 s hg38.chr3_KI270934v1_alt 17135 75 + 163458 GGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATG s panTro5.chr3 2478776 75 - 202621043 GGTGTGGAAGTTATGAGTGTGGAAGGTATGAGTGTGGAAGGTATGAGTGTGGAAGGTATGGGTGTGGAAGGTATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81342 75 - 190779 GGTGTGGAAGGTATGAGTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGCCTTGGAAGGTATG i panPan2.chrUn_NW_014024201v1 T 136 T 75 s gorGor5.CYUI01001831v1 775 74 + 55620 ACTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGA-TGTGGAAGGTATG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=8022.000000 s hg38.chr3_KI270934v1_alt 17210 14 + 163458 GGTGTGGAAGGTAT s panTro5.chr3 2478851 14 - 202621043 GGTGTGGAAGGTAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81342 14 - 190779 GGTGTGGAAGGTAT i panPan2.chrUn_NW_014024201v1 T 75 C 0 s gorGor5.CYUI01001831v1 849 14 + 55620 GGTGTGGAAGGTAT i gorGor5.CYUI01001831v1 C 0 I 31 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=179.000000 s hg38.chr3_KI270934v1_alt 17224 3 + 163458 GAC s panTro5.chr3 2478865 3 - 202621043 GGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81356 3 - 190779 GAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C e gorGor5.CYUI01001831v1 863 31 + 55620 I a score=31197.000000 s hg38.chr3_KI270934v1_alt 17227 59 + 163458 TGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGGTATGG s panTro5.chr3 2478868 59 - 202621043 CGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGGTATGG i panTro5.chr3 C 0 T 181 s panPan2.chrUn_NW_014024201v1 81359 59 - 190779 TGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGCCTTGGAAGGTATGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 894 59 + 55620 TGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGG i gorGor5.CYUI01001831v1 I 31 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=3055.000000 s hg38.chr3_KI270934v1_alt 17286 14 + 163458 GTGTGGAAGGTATG s panPan2.chrUn_NW_014024201v1 81418 14 - 190779 CCGTGGAAGATATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 953 14 + 55620 GTGTGGAAGGTATG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C e panTro5.chr3 2478927 181 - 202621043 T a score=21194.000000 s hg38.chr3_KI270934v1_alt 17300 46 + 163458 GGTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGG s panTro5.chr3 2478746 46 - 202621043 GGTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGTTATGA i panTro5.chr3 T 181 C 0 s panPan2.chrUn_NW_014024201v1 81432 46 - 190779 GCCGTGGAAGGTATGGGTGTGGAAGGTACGAGTGTGGTAGGTATGG i panPan2.chrUn_NW_014024201v1 C 0 T 135 s gorGor5.CYUI01001831v1 967 46 + 55620 ACTGTGGAAGGTACGGGTGTGGAAGGTACGGGTGTGGAAGGTACGG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=35860.000000 s hg38.chr3_KI270934v1_alt 17346 74 + 163458 GTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGGTATG s panTro5.chr3 2478792 74 - 202621043 GTGTGGAAGGTATGAGTGTGGAAGGTATGAGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81343 74 - 190779 GTGTGGAAGGTATGAGTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGCCTTGGAAGGTATG i panPan2.chrUn_NW_014024201v1 T 135 C 0 s gorGor5.CYUI01001831v1 1013 73 + 55620 GTGTGGAAGGTACGGATGTGGAAGGTACGGGTGTGGAAGGTAC-GGTGTGGAAGGTACGGGTGTGGAAGGTATG i gorGor5.CYUI01001831v1 C 0 T 223 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=27987.000000 s hg38.chr3_KI270934v1_alt 17420 61 + 163458 GGTGTGGAAGGTATGGGTGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATGG s panTro5.chr3 2478866 61 - 202621043 GCCGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGGTATGG i panTro5.chr3 C 0 T 150 s panPan2.chrUn_NW_014024201v1 81417 61 - 190779 GCCGTGGAAGATATGGCCGTGGAAGGTATGGGTGTGGAAGGTACGAGTGTGGTAGGTATGG i panPan2.chrUn_NW_014024201v1 C 0 T 90 s gorGor5.CYUI01001831v1 863 60 + 55620 GGTATGGAAGGTATGGGTGTGGAAGGTATGG-TGTGGAAGGTATGGGTGTGGAAGGTATGG i gorGor5.CYUI01001831v1 T 223 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=42515.000000 s hg38.chr3_KI270934v1_alt 17481 89 + 163458 GTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATG s panTro5.chr3 2478777 89 - 202621043 GTGTGGAAGTTATGAGTGTGGAAGGTATGAGTGTGGAAGGTATGAGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATG i panTro5.chr3 T 150 C 0 s panPan2.chrUn_NW_014024201v1 81388 89 - 190779 GTGTGGAAGGTATGGCCTTGGAAGGTATGGCCGTGGAAGATATGGCCGTGGAAGGTATGGGTGTGGAAGGTACGAGTGTGGTAGGTATG i panPan2.chrUn_NW_014024201v1 T 90 T 135 s gorGor5.CYUI01001831v1 923 89 + 55620 GTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTACGGGTGTGGAAGGTACGGGTGTGGAAGGTACG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=7489.000000 s hg38.chr3_KI270934v1_alt 17570 17 + 163458 GGTGTGGAAGGTATGGA s panTro5.chr3 2478866 17 - 202621043 GCCGTGGAAGGTATGGG i panTro5.chr3 C 0 T 135 s panPan2.chrUn_NW_014024201v1 81342 17 - 190779 GGTGTGGAAGGTATGAG i panPan2.chrUn_NW_014024201v1 T 135 C 0 s gorGor5.CYUI01001831v1 1012 17 + 55620 GGTGTGGAAGGTACGGA i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=14118.000000 s hg38.chr3_KI270934v1_alt 17587 27 + 163458 TGTGGAAGGTATGGGTGTGGAAGGTAT s panTro5.chr3 2478748 27 - 202621043 TGTGGAAGGTATGGGTGTGGAAGGTAA i panTro5.chr3 T 135 C 0 s panPan2.chrUn_NW_014024201v1 81359 27 - 190779 TGTGGAAGGTATGGGTGTGGAAGGTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1029 27 + 55620 TGTGGAAGGTACGGGTGTGGAAGGTAC i gorGor5.CYUI01001831v1 C 0 T 387 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=14506.000000 s hg38.chr3_KI270934v1_alt 17614 31 + 163458 GGGTGTGGAAGGTATGACTGTGGAAGGTATG s panTro5.chr3 2478775 31 - 202621043 GGGTGTGGAAGTTATGAGTGTGGAAGGTATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81386 31 - 190779 GGGTGTGGAAGGTATGGCCTTGGAAGGTATG i panPan2.chrUn_NW_014024201v1 C 0 T 75 s gorGor5.CYUI01001831v1 669 31 + 55620 GGGTGTGGAAGCTATGGCCGTGGAAGGTATG i gorGor5.CYUI01001831v1 T 387 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=23092.000000 s hg38.chr3_KI270934v1_alt 17645 45 + 163458 GGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATG s panTro5.chr3 2478806 45 - 202621043 AGTGTGGAAGGTATGAGTGTGGAAGGTATGGGTGTGGAAGGTATG i panTro5.chr3 C 0 T 105 s panPan2.chrUn_NW_014024201v1 81342 45 - 190779 GGTGTGGAAGGTATGAGTGTGGAAGGTATGGGTGTGGAAGGTAAG i panPan2.chrUn_NW_014024201v1 T 75 C 0 s gorGor5.CYUI01001831v1 700 45 + 55620 GGTGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGAAAGGTATG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=41898.000000 s hg38.chr3_KI270934v1_alt 17690 94 + 163458 GGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGACTG s panTro5.chr3 2478746 94 - 202621043 GGTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGTTATGAGTGTGGAAGGTATGAGTGTGGAAGGTATGAGTGTGGAAGGTATGGGTG i panTro5.chr3 T 105 C 0 s panPan2.chrUn_NW_014024201v1 81387 94 - 190779 GGTGTGGAAGGTATGGCCTTGGAAGGTATGGCCGTGGAAGATATGGCCGTGGAAGGTATGGGTGTGGAAGGTACGAGTGTGGTAGGTATGGCTG i panPan2.chrUn_NW_014024201v1 C 0 T 65 s gorGor5.CYUI01001831v1 745 93 + 55620 GGTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGATG- i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=7149.000000 s hg38.chr3_KI270934v1_alt 17784 25 + 163458 TGGAAGGTATGGGTGTGGAAGGTAT s panTro5.chr3 2478840 25 - 202621043 TGGAAGGTATGGGTGTGGAAGGTAT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 838 25 + 55620 TGGAAGGTATGGGTGTGGAAGGTAT i gorGor5.CYUI01001831v1 C 0 I 597 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 81481 65 - 190779 T a score=7238.000000 s hg38.chr3_KI270934v1_alt 17809 30 + 163458 GACTGTGGAAGGTATGGGTGTGGAAGGTAA s panTro5.chr3 2478865 30 - 202621043 GGCCGTGGAAGGTATGGGTGTGGAAGGTAA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 1460 30 + 55620 GGGTGTGGAAGGTATGGGTGTGGAAGGTAT i gorGor5.CYUI01001831v1 I 597 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 81481 65 - 190779 T a score=600.000000 s hg38.chr3_KI270934v1_alt 17839 1 + 163458 G s panTro5.chr3 2478895 1 - 202621043 G i panTro5.chr3 C 0 T 150 s panPan2.chrUn_NW_014024201v1 81416 1 - 190779 G i panPan2.chrUn_NW_014024201v1 T 65 C 0 s gorGor5.CYUI01001831v1 1490 1 + 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=29004.000000 s hg38.chr3_KI270934v1_alt 17840 61 + 163458 GGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGA s panTro5.chr3 2478746 61 - 202621043 GGTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGTTATGAGTGTGGAAGGTATGA i panTro5.chr3 T 150 I 45 s panPan2.chrUn_NW_014024201v1 81417 61 - 190779 GCCGTGGAAGATATGGCCGTGGAAGGTATGGGTGTGGAAGGTACGAGTGTGGTAGGTATGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1491 61 + 55620 GATGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=846.000000 s hg38.chr3_KI270934v1_alt 17901 3 + 163458 CTG s panTro5.chr3 2478852 3 - 202621043 GTG i panTro5.chr3 I 45 C 0 s panPan2.chrUn_NW_014024201v1 81478 3 - 190779 CTG i panPan2.chrUn_NW_014024201v1 C 0 T 75 s gorGor5.CYUI01001831v1 1552 3 + 55620 GTG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=20697.000000 s hg38.chr3_KI270934v1_alt 17904 42 + 163458 TGGAAGGTATGGCCGTGGAAGGTATGGGTGTGGAAGGTATGG s panTro5.chr3 2478855 42 - 202621043 TGGAAGGTATGGCCGTGGAAGGTATGGGTGTGGAAGGTAAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81406 42 - 190779 TGGAAGGTATGGCCGTGGAAGATATGGCCGTGGAAGGTATGG i panPan2.chrUn_NW_014024201v1 T 75 C 0 s gorGor5.CYUI01001831v1 1555 42 + 55620 TGGAAGGTATGGCCGTGGAAGGTACGAGTGTGGTAGGTATGG i gorGor5.CYUI01001831v1 C 0 T 183 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=6303.000000 s hg38.chr3_KI270934v1_alt 17946 15 + 163458 GTGTGGAAGGTATGG---- s panTro5.chr3 2478897 15 - 202621043 GTGTGGAAGGTATGG---- i panTro5.chr3 C 0 T 105 s panPan2.chrUn_NW_014024201v1 81448 15 - 190779 GTGTGGAAGGTACGA---- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1414 19 + 55620 GTGTGGAAGGTATGGTGTG i gorGor5.CYUI01001831v1 T 183 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=6024.000000 s hg38.chr3_KI270934v1_alt 17961 15 + 163458 GTGTGGAAGGTATGG s panTro5.chr3 2478807 15 - 202621043 GTGTGGAAGGTATGA i panTro5.chr3 T 105 C 0 s panPan2.chrUn_NW_014024201v1 81463 15 - 190779 GTGTGGTAGGTATGG i panPan2.chrUn_NW_014024201v1 C 0 T 136 s gorGor5.CYUI01001831v1 1433 14 + 55620 GTG-GGAAGGTATGG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=8060.000000 s hg38.chr3_KI270934v1_alt 17976 29 + 163458 GTGTGGAAGGTATGGGTGTGGAAGGTATG s panTro5.chr3 2478822 29 - 202621043 GTGTGGAAGGTATGGGTGTGGAAGGTATG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 1447 29 + 55620 ATGTGGAAGGTATGGGTGTGGAAGGTATG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 81478 136 - 190779 T a score=39477.000000 s hg38.chr3_KI270934v1_alt 18005 76 + 163458 GGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGGTATGG s panTro5.chr3 2478851 76 - 202621043 GGTGTGGAAGGTATGGCCGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGGTATGG i panTro5.chr3 C 0 T 120 s panPan2.chrUn_NW_014024201v1 81342 76 - 190779 GGTGTGGAAGGTATGAGTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGCCTTGGAAGGTATGG i panPan2.chrUn_NW_014024201v1 T 136 C 0 s gorGor5.CYUI01001831v1 1476 76 + 55620 GGTGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=20378.000000 s hg38.chr3_KI270934v1_alt 18081 44 + 163458 GTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATG s panTro5.chr3 2478807 44 - 202621043 GTGTGGAAGGTATGAGTGTGGAAGGTATGGGTGTGGAAGGTATG i panTro5.chr3 T 120 C 0 s panPan2.chrUn_NW_014024201v1 81418 44 - 190779 CCGTGGAAGATATGGCCGTGGAAGGTATGGGTGTGGAAGGTACG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1552 44 + 55620 GTGTGGAAGGTATGGCCGTGGAAGGTACGAGTGTGGTAGGTATG i gorGor5.CYUI01001831v1 C 0 T 540 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=7821.000000 s hg38.chr3_KI270934v1_alt 18125 16 + 163458 GGTGTGGAAGGTATGG s panTro5.chr3 2478851 16 - 202621043 GGTGTGGAAGGTATGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81462 16 - 190779 AGTGTGGTAGGTATGG i panPan2.chrUn_NW_014024201v1 C 0 T 136 s gorGor5.CYUI01001831v1 1056 16 + 55620 GGTGTGGAAGGTACGG i gorGor5.CYUI01001831v1 T 540 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=15241.000000 s hg38.chr3_KI270934v1_alt 18141 60 + 163458 GTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGCGGAAGGTATGGGTGTGGAAGGTATGG s panTro5.chr3 2478867 60 - 202621043 CCGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGGTATGG i panTro5.chr3 C 0 T 30 s gorGor5.CYUI01001831v1 1072 60 + 55620 GTGTGGAAGGTATGGATGTGGAAGGTACGGGTGTGGAAGGTATGGATGTGGAAGGTATGG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 81478 136 - 190779 T a score=7854.000000 s hg38.chr3_KI270934v1_alt 18201 30 + 163458 GTGCGGAAGGTATGGGTGTGGAAGGTATGG s panTro5.chr3 2478897 30 - 202621043 GTGTGGAAGGTATGGGTGTGGAAGGTATGG i panTro5.chr3 T 30 T 176 s gorGor5.CYUI01001831v1 1132 30 + 55620 ATGTGGAAAGTATGGGTGTGGAAGGTATGG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 81478 136 - 190779 T a score=1688.000000 s hg38.chr3_KI270934v1_alt 18231 19 + 163458 GTGTGGAAGGTATGGATGC s gorGor5.CYUI01001831v1 1162 19 + 55620 GTGTGGAAGGTATGGATGT i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 81478 136 - 190779 T e panTro5.chr3 2478927 176 - 202621043 T a score=9435.000000 s hg38.chr3_KI270934v1_alt 18250 40 + 163458 GGAAGGTATGGGTGTGGAAGGTATGGGTGCGGAAGGTATG s panTro5.chr3 2478751 40 - 202621043 GGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGTTATG i panTro5.chr3 T 176 T 45 s gorGor5.CYUI01001831v1 1181 40 + 55620 GGAATGTATGGATGTGGAAGGTATGGATGTGGAAGGTATG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 81478 136 - 190779 T a score=23181.000000 s hg38.chr3_KI270934v1_alt 18290 45 + 163458 GGTGCGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATG s panTro5.chr3 2478746 45 - 202621043 GGTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGTTATG i panTro5.chr3 T 45 T 45 s panPan2.chrUn_NW_014024201v1 81342 45 - 190779 GGTGTGGAAGGTATGAGTGTGGAAGGTATGGGTGTGGAAGGTAAG i panPan2.chrUn_NW_014024201v1 T 136 C 0 s gorGor5.CYUI01001831v1 1221 45 + 55620 GGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=32671.000000 s hg38.chr3_KI270934v1_alt 18335 69 + 163458 GGTGTGGAAGGTATGGGTGTGGAAGGTATGGCTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAA s panTro5.chr3 2478746 69 - 202621043 GGTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGTTATGAGTGTGGAAGGTATGAGTGTGGAA i panTro5.chr3 T 45 C 0 s panPan2.chrUn_NW_014024201v1 81387 69 - 190779 GGTGTGGAAGGTATGGCCTTGGAAGGTATGGCCGTGGAAGATATGGCCGTGGAAGGTATGGGTGTGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1266 69 + 55620 GGTGTGGAAGGTATGGATGTGGAAGGTATGGCTGTGGAAGGTATGGATGTGGAAGGTATGGATGTGGAA i gorGor5.CYUI01001831v1 C 0 T 374 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=10332.000000 s hg38.chr3_KI270934v1_alt 18404 22 + 163458 GGTATGACTGTGGAAGGTATGG s panTro5.chr3 2478815 22 - 202621043 GGTATGAGTGTGGAAGGTATGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81456 22 - 190779 GGTACGAGTGTGGTAGGTATGG i panPan2.chrUn_NW_014024201v1 C 0 T 135 s gorGor5.CYUI01001831v1 961 22 + 55620 GGTATGACTGTGGAAGGTACGG i gorGor5.CYUI01001831v1 T 374 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=13047.000000 s hg38.chr3_KI270934v1_alt 18426 24 + 163458 GTGTGGAAGGTATGGGTGTGGAAG s panTro5.chr3 2478837 24 - 202621043 GTGTGGAAGGTATGGGTGTGGAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81343 24 - 190779 GTGTGGAAGGTATGAGTGTGGAAG i panPan2.chrUn_NW_014024201v1 T 135 C 0 s gorGor5.CYUI01001831v1 983 24 + 55620 GTGTGGAAGGTACGGGTGTGGAAG i gorGor5.CYUI01001831v1 C 0 I 328 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=9777.000000 s hg38.chr3_KI270934v1_alt 18450 20 + 163458 GTATGGGTGTGGAAGGTATG s panTro5.chr3 2478861 20 - 202621043 GTATGGCCGTGGAAGGTATG i panTro5.chr3 C 0 T 135 s panPan2.chrUn_NW_014024201v1 81367 20 - 190779 GTATGGGTGTGGAAGGTAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1335 20 + 55620 GTATGGGTGTGGAAGGTATG i gorGor5.CYUI01001831v1 I 328 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=14275.000000 s hg38.chr3_KI270934v1_alt 18470 30 + 163458 GGTGTGGAAGGTATGGGTGTGGAAGGTATG s panTro5.chr3 2478746 30 - 202621043 GGTGTGGAAGGTATGGGTGTGGAAGGTAAG i panTro5.chr3 T 135 C 0 s panPan2.chrUn_NW_014024201v1 81387 30 - 190779 GGTGTGGAAGGTATGGCCTTGGAAGGTATG i panPan2.chrUn_NW_014024201v1 C 0 T 75 s gorGor5.CYUI01001831v1 1355 30 + 55620 GATGTGGAAGGTATGGATGTGGAAGGTATG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=20738.000000 s hg38.chr3_KI270934v1_alt 18500 49 + 163458 GGTGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATG----GGTG s panTro5.chr3 2478776 49 - 202621043 GGTGTGGAAGTTATGAGTGTGGAAGGTATGAGTGTGGAAGGTATG----AGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81342 49 - 190779 GGTGTGGAAGGTATGAGTGTGGAAGGTATGGGTGTGGAAGGTAAG----GGTG i panPan2.chrUn_NW_014024201v1 T 75 C 0 s gorGor5.CYUI01001831v1 1385 51 + 55620 GGTGTGGAAGGTATG-GTGT-GAAGGTATGGGTGTGGAAGGTATGGTGTGGTG i gorGor5.CYUI01001831v1 C 0 T 612 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=19105.000000 s hg38.chr3_KI270934v1_alt 18549 42 + 163458 TGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGG s panTro5.chr3 2478825 42 - 202621043 TGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81391 42 - 190779 TGGAAGGTATGGCCTTGGAAGGTATGGCCGTGGAAGATATGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 824 41 + 55620 TGGAAGGTATGA-TGTGGAAGGTATGGGTGTGGAAGGTATGG i gorGor5.CYUI01001831v1 T 612 T 236 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=638.000000 s hg38.chr3_KI270934v1_alt 18591 3 + 163458 CTG s panTro5.chr3 2478867 3 - 202621043 CCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81433 3 - 190779 CCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C e gorGor5.CYUI01001831v1 865 236 + 55620 T a score=13938.000000 s hg38.chr3_KI270934v1_alt 18594 26 + 163458 TGGAAGGTATGGGTGTGGAAGGTAAG s panTro5.chr3 2478870 26 - 202621043 TGGAAGGTATGGGTGTGGAAGGTAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81436 26 - 190779 TGGAAGGTATGGGTGTGGAAGGTACG i panPan2.chrUn_NW_014024201v1 C 0 T 120 s gorGor5.CYUI01001831v1 629 26 + 55620 TGGAAGGTATGGGTGTGGAAGGTATG i gorGor5.CYUI01001831v1 T 236 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=16383.000000 s hg38.chr3_KI270934v1_alt 18620 31 + 163458 GGTGTGGAAGGTATGGGTGTGGAAGGTATGG s panTro5.chr3 2478896 31 - 202621043 GGTGTGGAAGGTATGGGTGTGGAAGGTATGG i panTro5.chr3 C 0 T 45 s panPan2.chrUn_NW_014024201v1 81342 31 - 190779 GGTGTGGAAGGTATGAGTGTGGAAGGTATGG i panPan2.chrUn_NW_014024201v1 T 120 C 0 s gorGor5.CYUI01001831v1 655 31 + 55620 GATGTGGAAGGTATGGGTGTGGAAGCTATGG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=21607.000000 s hg38.chr3_KI270934v1_alt 18651 45 + 163458 GTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGTTATGG s panTro5.chr3 2478882 45 - 202621043 GTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGGTATGG i panTro5.chr3 T 45 T 165 s panPan2.chrUn_NW_014024201v1 81373 45 - 190779 GTGTGGAAGGTAAGGGTGTGGAAGGTATGGCCTTGGAAGGTATGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 686 45 + 55620 CCGTGGAAGGTATGGGTGTGGAAGGTATGGATGTGGAAGGTATGG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=26999.000000 s hg38.chr3_KI270934v1_alt 18696 60 + 163458 CCGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGG s panTro5.chr3 2478762 60 - 202621043 GTGTGGAAGGTAAGGGTGTGGAAGTTATGAGTGTGGAAGGTATGAGTGTGGAAGGTATGA i panTro5.chr3 T 165 C 0 s panPan2.chrUn_NW_014024201v1 81418 60 - 190779 CCGTGGAAGATATGGCCGTGGAAGGTATGGGTGTGGAAGGTACGAGTGTGGTAGGTATGG i panPan2.chrUn_NW_014024201v1 C 0 T 136 s gorGor5.CYUI01001831v1 731 60 + 55620 GTGTGAAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=38.000000 s hg38.chr3_KI270934v1_alt 18756 1 + 163458 A s panTro5.chr3 2478822 1 - 202621043 G i panTro5.chr3 C 0 T 75 s gorGor5.CYUI01001831v1 791 1 + 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 81478 136 - 190779 T a score=7594.000000 s hg38.chr3_KI270934v1_alt 18757 28 + 163458 TGTGGAAGGTATGGGTGTGGAAGGTATG s panTro5.chr3 2478748 28 - 202621043 TGTGGAAGGTATGGGTGTGGAAGGTAAG i panTro5.chr3 T 75 C 0 s gorGor5.CYUI01001831v1 792 28 + 55620 TGTGGAAGGTATGGGTGTGGAAGGTATG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 81478 136 - 190779 T a score=8526.000000 s hg38.chr3_KI270934v1_alt 18785 16 + 163458 GGTGTGGAAGGTATGA s panTro5.chr3 2478776 16 - 202621043 GGTGTGGAAGTTATGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81342 16 - 190779 GGTGTGGAAGGTATGA i panPan2.chrUn_NW_014024201v1 T 136 C 0 s gorGor5.CYUI01001831v1 820 16 + 55620 GGTGTGGAAGGTATGA i gorGor5.CYUI01001831v1 C 0 I 29 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=-150.000000 s hg38.chr3_KI270934v1_alt 18801 1 + 163458 C s panTro5.chr3 2478792 1 - 202621043 G i panTro5.chr3 C 0 T 45 s panPan2.chrUn_NW_014024201v1 81358 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C e gorGor5.CYUI01001831v1 836 29 + 55620 I a score=46014.000000 s hg38.chr3_KI270934v1_alt 18802 96 + 163458 TGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGCCGTGGAAGGTATGGGTGTGGA s panTro5.chr3 2478748 96 - 202621043 TGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGTTATGAGTGTGGAAGGTATGAGTGTGGAAGGTATGAGTGTGGAAGGTATGGGTGTGGA i panTro5.chr3 T 45 C 0 s panPan2.chrUn_NW_014024201v1 81359 96 - 190779 TGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGCCTTGGAAGGTATGGCCGTGGAAGATATGGCCGTGGAAGGTATGGGTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 865 95 + 55620 TATGGAAGGTATGGGTGTGGAAGGTAT-GGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGA i gorGor5.CYUI01001831v1 I 29 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=4991.000000 s hg38.chr3_KI270934v1_alt 18898 9 + 163458 AGGTATGAC s panTro5.chr3 2478844 9 - 202621043 AGGTATGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81455 9 - 190779 AGGTACGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 960 9 + 55620 AGGTATGAC i gorGor5.CYUI01001831v1 C 0 I 87 s nomLeu3.chr11 2781650 9 - 123690457 AGATATGCC i nomLeu3.chr11 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I a score=6460.000000 s hg38.chr3_KI270934v1_alt 18907 15 + 163458 CGTGGAAGGTATGGC s panTro5.chr3 2478853 15 - 202621043 TGTGGAAGGTATGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81464 15 - 190779 TGTGGTAGGTATGGC i panPan2.chrUn_NW_014024201v1 C 0 T 45 s nomLeu3.chr11 2781659 15 - 123690457 CGTCGAAGGTACGGC i nomLeu3.chr11 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e gorGor5.CYUI01001831v1 969 87 + 55620 I a score=600.000000 s hg38.chr3_KI270934v1_alt 18922 1 + 163458 C s panTro5.chr3 2478868 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81434 1 - 190779 C i panPan2.chrUn_NW_014024201v1 T 45 C 0 s nomLeu3.chr11 2781674 1 - 123690457 C i nomLeu3.chr11 C 0 I 1 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e gorGor5.CYUI01001831v1 969 87 + 55620 I a score=7339.000000 s hg38.chr3_KI270934v1_alt 18923 27 + 163458 GTGGAAGGTATGGGTGTGGAAGGTAAG s panTro5.chr3 2478869 27 - 202621043 GTGGAAGGTATGGGTGTGGAAGGTAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81435 27 - 190779 GTGGAAGGTATGGGTGTGGAAGGTACG i panPan2.chrUn_NW_014024201v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781675 1 - 123690457 I e gorGor5.CYUI01001831v1 969 87 + 55620 I a score=7821.000000 s hg38.chr3_KI270934v1_alt 18950 16 + 163458 GGTGTGGAAGGTATGG s panTro5.chr3 2478896 16 - 202621043 GGTGTGGAAGGTATGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81462 16 - 190779 AGTGTGGTAGGTATGG i panPan2.chrUn_NW_014024201v1 C 0 T 105 s gorGor5.CYUI01001831v1 1056 16 + 55620 GGTGTGGAAGGTACGG i gorGor5.CYUI01001831v1 I 87 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781675 1 - 123690457 I a score=4311.000000 s hg38.chr3_KI270934v1_alt 18966 15 + 163458 GTGTGGAAGGTATGG s panTro5.chr3 2478912 15 - 202621043 GTGTGGAAGGTATGG i panTro5.chr3 C 0 T 165 s gorGor5.CYUI01001831v1 1072 15 + 55620 GTGTGGAAGGTATGG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781675 1 - 123690457 I e panPan2.chrUn_NW_014024201v1 81478 105 - 190779 T a score=49708.000000 s hg38.chr3_KI270934v1_alt 18981 108 + 163458 GTGTGGAAGGTAAGGGTGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATCGGTGTGGAAGGTATGGGTGTGGAAGGTATGACTG s panTro5.chr3 2478762 108 - 202621043 GTGTGGAAGGTAAGGGTGTGGAAGTTATGAGTGTGGAAGGTATGAGTGTGGAAGGTATGAGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGCCG i panTro5.chr3 T 165 C 0 s panPan2.chrUn_NW_014024201v1 81373 108 - 190779 GTGTGGAAGGTAAGGGTGTGGAAGGTATGGCCTTGGAAGGTATGGCCGTGGAAGATATGGCCGTGGAAGGTATGGGTGTGGAAGGTACGAGTGTGGTAGGTATGGCTG i panPan2.chrUn_NW_014024201v1 T 105 T 139 s gorGor5.CYUI01001831v1 1087 108 + 55620 ATGTGGAAGGTACGGGTGTGGAAGGTATGGATGTGGAAGGTATGGATGTGGAAAGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGATGTGGAATGTATGGATG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781675 1 - 123690457 I a score=3138.000000 s hg38.chr3_KI270934v1_alt 19089 11 + 163458 TGGAAGGTATG s panTro5.chr3 2478870 11 - 202621043 TGGAAGGTATG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 1195 11 + 55620 TGGAAGGTATG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781675 1 - 123690457 I e panPan2.chrUn_NW_014024201v1 81481 139 - 190779 T a score=7579.000000 s hg38.chr3_KI270934v1_alt 19100 17 + 163458 GGTGTGGAAGGTATGAC s panTro5.chr3 2478881 17 - 202621043 GGTGTGGAAGGTAAGGG i panTro5.chr3 C 0 T 150 s panPan2.chrUn_NW_014024201v1 81342 17 - 190779 GGTGTGGAAGGTATGAG i panPan2.chrUn_NW_014024201v1 T 139 C 0 s gorGor5.CYUI01001831v1 1206 17 + 55620 GATGTGGAAGGTATGGG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781675 1 - 123690457 I a score=15188.000000 s hg38.chr3_KI270934v1_alt 19117 28 + 163458 TGTGGAAGGTATGGGTGTGGAAGGTATG s panTro5.chr3 2478748 28 - 202621043 TGTGGAAGGTATGGGTGTGGAAGGTAAG i panTro5.chr3 T 150 T 30 s panPan2.chrUn_NW_014024201v1 81359 28 - 190779 TGTGGAAGGTATGGGTGTGGAAGGTAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1223 28 + 55620 TGTGGAAGGTATGGGTGTGGAAGGTATG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781675 1 - 123690457 I a score=14919.000000 s hg38.chr3_KI270934v1_alt 19145 30 + 163458 GGTGTGGAAGGTATGGGTGTGGAAGGTATG s panTro5.chr3 2478746 30 - 202621043 GGTGTGGAAGGTATGGGTGTGGAAGGTAAG i panTro5.chr3 T 30 C 0 s panPan2.chrUn_NW_014024201v1 81387 30 - 190779 GGTGTGGAAGGTATGGCCTTGGAAGGTATG i panPan2.chrUn_NW_014024201v1 C 0 T 75 s gorGor5.CYUI01001831v1 1251 30 + 55620 GGTGTGGAAGGTATGGGTGTGGAAGGTATG i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781675 1 - 123690457 I a score=8013.000000 s hg38.chr3_KI270934v1_alt 19175 18 + 163458 GGTGTGGAAGGTATGACT s panTro5.chr3 2478776 18 - 202621043 GGTGTGGAAGTTATGAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81342 18 - 190779 GGTGTGGAAGGTATGAGT i panPan2.chrUn_NW_014024201v1 T 75 C 0 s gorGor5.CYUI01001831v1 1281 18 + 55620 GATGTGGAAGGTATGGCT i gorGor5.CYUI01001831v1 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e nomLeu3.chr11 2781675 1 - 123690457 I a score=12728.000000 s hg38.chr3_KI270934v1_alt 19193 17 + 163458 GTGGAAGGTATGGGTGT s panTro5.chr3 2478794 17 - 202621043 GTGGAAGGTATGAGTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81360 17 - 190779 GTGGAAGGTATGGGTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1299 17 + 55620 GTGGAAGGTATGGATGT i gorGor5.CYUI01001831v1 C 0 I 120 s nomLeu3.chr11 2781676 17 - 123690457 GTGAAAGGTATGTCCGT i nomLeu3.chr11 I 1 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I a score=81529.000000 s hg38.chr3_KI270934v1_alt 19210 101 + 163458 GGAAGGTATGGGTGTGGAAGGTATGGCTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGG s panTro5.chr3 2478811 101 - 202621043 GGAAGGTATGAGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGCCGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81377 101 - 190779 GGAAGGTAAGGGTGTGGAAGGTATGGCCTTGGAAGGTATGGCCGTGGAAGATATGGCCGTGGAAGGTATGGGTGTGGAAGGTACGAGTGTGGTAGGTATGG i panPan2.chrUn_NW_014024201v1 C 0 I 32 s gorGor5.CYUI01001831v1 1436 101 + 55620 GGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGG i gorGor5.CYUI01001831v1 I 120 C 0 s nomLeu3.chr11 2781693 101 - 123690457 GGAAGGTATGGCCGTGGAAGGTATGGGTGTGGAAGGTATGGCCGTGGAAGGTATGTCCGTGGAAGGTATGGCCGTGGAAGGTATGGGTGTGGAAGGTATGG i nomLeu3.chr11 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I a score=7581.000000 s hg38.chr3_KI270934v1_alt 19311 15 + 163458 GTGTGGAAGGTATGG s panTro5.chr3 2478912 15 - 202621043 GTGTGGAAGGTATGG i panTro5.chr3 C 0 T 45 s gorGor5.CYUI01001831v1 1537 15 + 55620 GTGTGGAAGGTATGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781794 15 - 123690457 CCGTGGAAGGTATGG i nomLeu3.chr11 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e panPan2.chrUn_NW_014024201v1 81478 32 - 190779 I a score=14284.000000 s hg38.chr3_KI270934v1_alt 19326 29 + 163458 GTGTGGAAGGTATGGGTGTGGAAGGTACG s panTro5.chr3 2478882 29 - 202621043 GTGTGGAAGGTAAGGGTGTGGAAGGTATG i panTro5.chr3 T 45 C 0 s gorGor5.CYUI01001831v1 1552 29 + 55620 GTGTGGAAGGTATGGCCGTGGAAGGTACG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781809 29 - 123690457 GTGTGGAAGGTATGGCCGTGGAAGGTACG i nomLeu3.chr11 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2301704 30 - 204787373 I e panPan2.chrUn_NW_014024201v1 81478 32 - 190779 I a score=5868.000000 s hg38.chr3_KI270934v1_alt 19355 8 + 163458 AGTGTGGT s panTro5.chr3 2478911 8 - 202621043 GGTGTGGA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 1581 8 + 55620 AGTGTGGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781838 8 - 123690457 AGTGTGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301734 8 - 204787373 AGTGTGGA i rheMac8.chr2 I 30 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e canFam3.chr33 2293049 17 - 31377067 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 81478 32 - 190779 I a score=9138.000000 s hg38.chr3_KI270934v1_alt 19363 8 + 163458 AGGTATGG s panTro5.chr3 2478919 8 - 202621043 AGGTATGG i panTro5.chr3 C 0 I 6987 s gorGor5.CYUI01001831v1 1589 8 + 55620 AGGTATGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781846 8 - 123690457 AAGTATGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301742 8 - 204787373 AGGTATGG i rheMac8.chr2 C 0 C 0 s canFam3.chr33 2293066 8 - 31377067 AAGTGTAG i canFam3.chr33 I 17 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 81478 32 - 190779 I a score=74.000000 s hg38.chr3_KI270934v1_alt 19371 5 + 163458 CTGCA-- s gorGor5.CYUI01001831v1 1597 5 + 55620 CTGCA-- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781854 5 - 123690457 CTGCA-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301750 5 - 204787373 CCGTG-- i rheMac8.chr2 C 0 C 0 s canFam3.chr33 2293074 5 - 31377067 --ACATG i canFam3.chr33 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19105897 0 - 19675229 C e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e otoGar3.GL873829 175510 2 + 608964 I e colAng1.NW_012118932v1 7322227 5 - 7796314 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e chlSab2.chr15 91321061 0 + 91754291 C e cerAty1.NW_012004056v1 16342348 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 81478 32 - 190779 I e panTro5.chr3 2478927 6987 - 202621043 I a score=2552.000000 s hg38.chr3_KI270934v1_alt 19376 1 + 163458 G s gorGor5.CYUI01001831v1 1602 1 + 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781859 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301755 1 - 204787373 G i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105897 1 - 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342348 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321061 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7322232 1 - 7796314 G i colAng1.NW_012118932v1 I 5 C 0 s canFam3.chr33 2293079 1 - 31377067 A i canFam3.chr33 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e otoGar3.GL873829 175510 2 + 608964 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 81478 32 - 190779 I e panTro5.chr3 2478927 6987 - 202621043 I a score=20487.000000 s hg38.chr3_KI270934v1_alt 19377 7 + 163458 AAAGTCG s gorGor5.CYUI01001831v1 1603 7 + 55620 AAAGTCG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781860 7 - 123690457 AAAATCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301756 7 - 204787373 AAAGTGG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105898 7 - 19675229 AAAGTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342349 7 - 16847902 AAAGTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321062 7 + 91754291 AAAGTGG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7322233 7 - 7796314 AAAGTCG i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 175512 7 + 608964 AAAGTAG i otoGar3.GL873829 I 2 I 1 s canFam3.chr33 2293080 7 - 31377067 AAAGGAG i canFam3.chr33 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e saiBol1.JH378146 17247715 1 - 17725628 I e calJac3.chr17 73795039 3 + 74750902 I e cebCap1.NW_016107444v1 6335317 13 + 6778120 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 81478 32 - 190779 I e panTro5.chr3 2478927 6987 - 202621043 I a score=-1415.000000 s hg38.chr3_KI270934v1_alt 19384 1 + 163458 T s gorGor5.CYUI01001831v1 1610 1 + 55620 T i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781867 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301763 1 - 204787373 A i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105905 1 - 19675229 A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342356 1 - 16847902 A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321069 1 + 91754291 A i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7322240 1 - 7796314 A i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17247716 1 - 17725628 T i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 6335330 1 + 6778120 T i cebCap1.NW_016107444v1 I 13 C 0 s canFam3.chr33 2293087 1 - 31377067 T i canFam3.chr33 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e calJac3.chr17 73795039 3 + 74750902 I e otoGar3.GL873829 175519 1 + 608964 I e manLeu1.NW_012102020v1 1366572 6 + 1977891 I e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 81478 32 - 190779 I e panTro5.chr3 2478927 6987 - 202621043 I a score=21713.000000 s hg38.chr3_KI270934v1_alt 19385 4 + 163458 CCCG s gorGor5.CYUI01001831v1 1611 4 + 55620 CCCG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781868 4 - 123690457 CTCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301764 4 - 204787373 CCCG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105906 4 - 19675229 CCCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342357 4 - 16847902 CCGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321070 4 + 91754291 CCCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366578 4 + 1977891 CCCG i manLeu1.NW_012102020v1 I 6 C 0 s colAng1.NW_012118932v1 7322241 4 - 7796314 CCCG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17247717 4 - 17725628 CCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335331 4 + 6778120 CCCG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 175520 4 + 608964 CCCA i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 2293088 4 - 31377067 CCCA i canFam3.chr33 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e calJac3.chr17 73795039 3 + 74750902 I e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 81478 32 - 190779 I e panTro5.chr3 2478927 6987 - 202621043 I a score=93804.000000 s hg38.chr3_KI270934v1_alt 19389 13 + 163458 GTGCTGCATGGGG s gorGor5.CYUI01001831v1 1615 13 + 55620 GTGCTGCATGGGG i gorGor5.CYUI01001831v1 C 0 I 1 s nomLeu3.chr11 2781872 13 - 123690457 GTGCTGCATGGGG i nomLeu3.chr11 C 0 I 1 s rheMac8.chr2 2301768 13 - 204787373 GTGCTGCATGGGG i rheMac8.chr2 C 0 I 1 s macNem1.NW_012014355v1 19105910 13 - 19675229 GTGCTGCATGGGG i macNem1.NW_012014355v1 C 0 I 1 s cerAty1.NW_012004056v1 16342361 13 - 16847902 GTGCTGCATGGGG i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 91321074 13 + 91754291 GTGCTGCATGGGG i chlSab2.chr15 C 0 I 1 s manLeu1.NW_012102020v1 1366582 13 + 1977891 GTGCTGCATGGGG i manLeu1.NW_012102020v1 C 0 I 1 s colAng1.NW_012118932v1 7322245 13 - 7796314 GTGCTGCGTGGGG i colAng1.NW_012118932v1 C 0 I 1 s calJac3.chr17 73795042 13 + 74750902 GTCCTGCATGGGG i calJac3.chr17 I 3 I 1 s saiBol1.JH378146 17247721 13 - 17725628 GCCCTGCATGGGG i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 6335335 13 + 6778120 GTCCTGCATGGGG i cebCap1.NW_016107444v1 C 0 I 1 s otoGar3.GL873829 175524 13 + 608964 GTGCCACTTGGAG i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 2293092 13 - 31377067 GTATTGCATGGGG i canFam3.chr33 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 81478 32 - 190779 I e panTro5.chr3 2478927 6987 - 202621043 I a score=25981.000000 s hg38.chr3_KI270934v1_alt 19402 6 + 163458 -GTGGAT s panPan2.chrUn_NW_014024201v1 81510 6 - 190779 -GCGGAT i panPan2.chrUn_NW_014024201v1 I 32 C 0 s gorGor5.CYUI01001831v1 1629 6 + 55620 -GCGGAT i gorGor5.CYUI01001831v1 I 1 C 0 s nomLeu3.chr11 2781886 6 - 123690457 -GCAGAT i nomLeu3.chr11 I 1 C 0 s rheMac8.chr2 2301782 6 - 204787373 -GTGGAT i rheMac8.chr2 I 1 C 0 s macNem1.NW_012014355v1 19105924 6 - 19675229 -GCGGAT i macNem1.NW_012014355v1 I 1 C 0 s cerAty1.NW_012004056v1 16342375 6 - 16847902 -GTGGAT i cerAty1.NW_012004056v1 I 1 C 0 s chlSab2.chr15 91321088 6 + 91754291 -GTGGAT i chlSab2.chr15 I 1 C 0 s manLeu1.NW_012102020v1 1366596 6 + 1977891 -GTGGAT i manLeu1.NW_012102020v1 I 1 C 0 s colAng1.NW_012118932v1 7322259 6 - 7796314 -GCGGAT i colAng1.NW_012118932v1 I 1 C 0 s calJac3.chr17 73795056 6 + 74750902 -GGGGAG i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17247735 6 - 17725628 -GGGGAG i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 6335349 6 + 6778120 -GGGGAA i cebCap1.NW_016107444v1 I 1 C 0 s otoGar3.GL873829 175538 5 + 608964 -GGAGA- i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 2293105 7 - 31377067 AGGAGAC i canFam3.chr33 C 0 C 0 e micMur3.chr1 88355187 64 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=333778.000000 s hg38.chr3_KI270934v1_alt 19408 37 + 163458 CCCCGAAGCATTTGGGGTGGCTGAAAATGAGAAGAAG s panPan2.chrUn_NW_014024201v1 81516 37 - 190779 CCCCGAAGCATTTGGGGTGGCTGAAAATGAGAAGAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1635 37 + 55620 CCCCGAAGCATTTGGGGTGGCTGAAAATGAGAAGAAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781892 37 - 123690457 CCCCGAAGCATTTGGGGTGGCTCGAAATGAAAAGAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301788 37 - 204787373 CCCCGAATCATTTGGGGTGGCTGAAAATGAGAACAAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105930 37 - 19675229 CCCCAAATCATTTGGGGTGGCTGAAAATGAGAACAAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342381 37 - 16847902 CCCCAAATCATTTGGGGTGGCTGAAAATGAGAACAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321094 37 + 91754291 CCCCGAATCATTTGGGGTGGCTGAAAATGAGAACAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366602 37 + 1977891 CCCCGAATCATTTGGGGTGGCTGAAAATGAGAACAAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7322265 37 - 7796314 CCCCGAATCATTTGGGGTGGCTGAAAATGAGAAGAAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73795062 37 + 74750902 CCCCAAAGCATTTGGGGTTGCTGAAAATGAGAAGAAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247741 36 - 17725628 CCCC-GAGCCTTTGGGGTTGCTGAAGATGAGAAGAAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335355 37 + 6778120 CCCCAAAGCATTTGGGGTTGCTGAAAATGAGAAGAAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1102 34 - 21398 CCCCGAAGCGTTTGGGGT---TGAAAATGAGAAGAAG i aotNan1.NW_018492867v1 N 0 C 0 s micMur3.chr1 88355251 37 + 114275543 CCCCAAAGCATTTGGGGTGGCTGAAAGTAAGGAGAAG i micMur3.chr1 I 64 I 18 s otoGar3.GL873829 175543 34 + 608964 GCCCCAAGCATCTGGGGTGGCTGAAAGGAAGAGG--- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2293112 36 - 31377067 CCCCAAGACACTTGGGGGTG-TGGAAACCAGGTGAAG i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2667743 1352 - 6579706 I e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=180026.000000 s hg38.chr3_KI270934v1_alt 19445 26 + 163458 GGTAGCAAAAAGTGCGGCCGGCATGC s panPan2.chrUn_NW_014024201v1 81553 26 - 190779 GGGAGCAAAAAGTGCGGCCGGCATGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1672 26 + 55620 GGTAGCCAAAAGTGCGGCCGGCATGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781929 26 - 123690457 GGTAGCAAAAAGTGCGGCCGGCATGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301825 26 - 204787373 AGGAGCAAAAAGTGCGGCCAGCATGC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105967 26 - 19675229 AGGAGCAAAAAGTGCGGCCAGCATGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342418 26 - 16847902 AGGAGCAAAAAGTGCGGCCAGCATGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321131 26 + 91754291 AGGAGCAAAAAGTGCGGCCAGCATGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366639 26 + 1977891 AGGAGCAAAAAGTGCGGCCAGCATGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7322302 26 - 7796314 AGGAGCAAAAAGTGTGGCCAGCATGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73795099 24 + 74750902 AGGAGCA--AAGTGCGGCTGGCATGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247777 24 - 17725628 AGGAGCC--AAGTGCGGCTGGCATGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335392 24 + 6778120 AAGAGCC--AAGTGCGGCTGGCATGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1136 24 - 21398 AGGGGCA--AAGTGCGGCTGGCACGC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 175577 26 + 608964 AGTGGTGAGAAGCACAGTTGACACGC i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 2293148 25 - 31377067 -AATGTTGAGAATGAGGCCGTCATGT i canFam3.chr33 C 0 C 0 e micMur3.chr1 88355288 18 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=30969.000000 s hg38.chr3_KI270934v1_alt 19471 10 + 163458 -GGGGAATCCT s panPan2.chrUn_NW_014024201v1 81579 10 - 190779 -GGGGAATCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1698 10 + 55620 -GGGGAATCCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781955 10 - 123690457 -GGGGCACCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301851 6 - 204787373 -----AATCCT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105993 6 - 19675229 -----AATCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342444 6 - 16847902 -----AATCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321157 6 + 91754291 -----AATCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366665 6 + 1977891 -----AATCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7322328 6 - 7796314 -----AATCCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73795123 9 + 74750902 --GGGAATCCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247801 9 - 17725628 --GGGAATCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335416 9 + 6778120 --GGGAGTCCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1160 9 - 21398 --GGGAATCCC i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88355306 10 + 114275543 -GGGGAATCCT i micMur3.chr1 I 18 C 0 s otoGar3.GL873829 175604 10 + 608964 -GGGGAATCCT i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 2293173 11 - 31377067 GATACAATCAG i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2667743 1352 - 6579706 I e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=242551.000000 s hg38.chr3_KI270934v1_alt 19481 31 + 163458 GTAGGCAACGGGAGCCAGGGAGGACTCAGTT s panPan2.chrUn_NW_014024201v1 81589 31 - 190779 GTAGGCAACGGGAGCCAGGGAGGACTCAGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1708 31 + 55620 GTAGGCAACGGGAGCCAGAGAGGACTCAGTT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781965 31 - 123690457 GTAGGTAAGGGGAGCCTGGGAGGACTCAGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301857 29 - 204787373 GTAGGTAAGGAGAGCCAGGGAGGACT--GTT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19105999 29 - 19675229 GTAGGTAAGGAGAGCCAGGGAGGACT--GTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342450 29 - 16847902 GTAGGTAAGGAGAGCCAGGGAGGACT--GTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321163 29 + 91754291 GTAGGTAAGGAGAGCCAGGGAGGACT--GTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366671 29 + 1977891 GTAGGTAAGGAGAGCCAGGGAGGACT--GTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7322334 29 - 7796314 GTAGGTAAGGAGAGCCAGGGAGGACT--GTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73795132 27 + 74750902 GGAGGTAAGGAGCGCCAGGGAGGACTC---- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247810 31 - 17725628 GTGGGTCAGGAGAGCCAGGGAGGATTCGGTT i saiBol1.JH378146 C 0 I 4 s cebCap1.NW_016107444v1 6335425 31 + 6778120 GTAGGTAAGGACAGCCAGGGAGGACTCAGTT i cebCap1.NW_016107444v1 C 0 I 3 s aotNan1.NW_018492867v1 1169 31 - 21398 GTAGGTGAGGAGAGCCAGGGAGGACTCAGTT i aotNan1.NW_018492867v1 C 0 I 3 s micMur3.chr1 88355316 31 + 114275543 GTAGGTAAGGGGAACCAGGGAGGACACAGTT i micMur3.chr1 C 0 I 90 s otoGar3.GL873829 175614 31 + 608964 GTAGGTGAGTGGAACCAGGGAGGACACTGTT i otoGar3.GL873829 C 0 I 4 s mm10.chr16 32758571 30 + 98207768 GTGGGTAAGG-GAATCAGGGAGGATACAGAT i mm10.chr16 N 0 C 0 s canFam3.chr33 2293184 23 - 31377067 GTAG-------GACCCGGCCAGGTTTATAC- i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2667743 1352 - 6579706 I e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=141905.000000 s hg38.chr3_KI270934v1_alt 19512 19 + 163458 TTGCATTGTACAAATGGCA s panPan2.chrUn_NW_014024201v1 81620 19 - 190779 TTGCATTGTACAAATGGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1739 19 + 55620 TCGCATTGTACAAATGGCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2781996 19 - 123690457 TTGCATTGTACAAATGGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301886 19 - 204787373 TTGCATTGTACAAATGGCA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19106028 19 - 19675229 TTGCATTGTACAAATGGCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342479 19 - 16847902 TTGCATTGTACAAATGGCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321192 19 + 91754291 TTGCATTGTACAAATGGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366700 19 + 1977891 TTGCATTGTACAAATGGCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7322363 19 - 7796314 TTGCATTGTACAAATGGCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73795159 19 + 74750902 CTGCATTTTACAAATGGCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247845 19 - 17725628 TTGCATTTTACAAACCGCA i saiBol1.JH378146 I 4 C 0 s cebCap1.NW_016107444v1 6335459 19 + 6778120 TTGCATTTGACAAATGGCA i cebCap1.NW_016107444v1 I 3 C 0 s aotNan1.NW_018492867v1 1203 19 - 21398 TTGCATTTTACAAATGGCA i aotNan1.NW_018492867v1 I 3 I 34 s otoGar3.GL873829 175649 17 + 608964 TTGCATTTT--AGATGGCA i otoGar3.GL873829 I 4 C 0 s mm10.chr16 32758601 6 + 98207768 CTGCAC------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2293207 12 - 31377067 TTGGATGGTGCC------- i canFam3.chr33 C 0 C 0 e micMur3.chr1 88355347 90 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=3455.000000 s hg38.chr3_KI270934v1_alt 19531 1 + 163458 T s panPan2.chrUn_NW_014024201v1 81639 1 - 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1758 1 + 55620 T i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782015 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301905 1 - 204787373 T i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19106047 1 - 19675229 T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342498 1 - 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321211 1 + 91754291 T i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366719 1 + 1977891 T i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7322382 1 - 7796314 T i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73795178 1 + 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247864 1 - 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335478 1 + 6778120 C i cebCap1.NW_016107444v1 C 0 I 7 s otoGar3.GL873829 175666 1 + 608964 C i otoGar3.GL873829 C 0 C 0 e mm10.chr16 32758607 0 + 98207768 C e aotNan1.NW_018492867v1 1222 34 - 21398 I e micMur3.chr1 88355347 90 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e canFam3.chr33 2293219 0 - 31377067 C e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=43112.000000 s hg38.chr3_KI270934v1_alt 19532 14 + 163458 TTAACAAGTGGTGC s panPan2.chrUn_NW_014024201v1 81640 14 - 190779 TTAACAAGTGGTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1759 14 + 55620 TTAACAAGTGGCGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782016 14 - 123690457 TTAACAAGTGGTGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301906 14 - 204787373 TTAACAAGTGGTGC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19106048 14 - 19675229 TTAACAAGTGGTGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342499 14 - 16847902 TTAACAAGTGGTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321212 14 + 91754291 TTAACAAGTGGTGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366720 14 + 1977891 TTAACAAGTGGTGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7322383 14 - 7796314 TTAACAAGTGGTGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73795179 7 + 74750902 ----CCTGTGG--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247865 6 - 17725628 ----CC-GTGG--- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 175667 2 + 608964 TT------------ i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32758607 8 + 98207768 ------AGTGGTGG i mm10.chr16 C 0 C 0 s canFam3.chr33 2293219 7 - 31377067 -------GTGGTGG i canFam3.chr33 C 0 C 0 e aotNan1.NW_018492867v1 1222 34 - 21398 I e micMur3.chr1 88355347 90 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e cebCap1.NW_016107444v1 6335479 7 + 6778120 I e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=59198.000000 s hg38.chr3_KI270934v1_alt 19546 9 + 163458 CTGGAGCGG s panPan2.chrUn_NW_014024201v1 81654 9 - 190779 CTGGAGCGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1773 9 + 55620 CTGGAGCGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782030 9 - 123690457 CTGGAGTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301920 9 - 204787373 CTGCAGCGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19106062 9 - 19675229 CTGCAGCGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342513 9 - 16847902 CTGCAGCGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321226 9 + 91754291 CTGCAGTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1366734 9 + 1977891 CTGCAGCGG i manLeu1.NW_012102020v1 C 0 M 895 s colAng1.NW_012118932v1 7322397 9 - 7796314 CTGCAGCGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73795186 9 + 74750902 CTGGAGTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247871 9 - 17725628 CTGGACTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335486 9 + 6778120 CTGCAGCGG i cebCap1.NW_016107444v1 I 7 C 0 s otoGar3.GL873829 175669 6 + 608964 ---GAGTGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32758615 9 + 98207768 CTGGTATGG i mm10.chr16 C 0 I 6 s canFam3.chr33 2293226 9 - 31377067 GTGGGGTGT i canFam3.chr33 C 0 C 0 e aotNan1.NW_018492867v1 1222 34 - 21398 I e micMur3.chr1 88355347 90 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=59082.000000 s hg38.chr3_KI270934v1_alt 19555 20 + 163458 ---TCCGATTTGCAGG------------CAGTGAG s panPan2.chrUn_NW_014024201v1 81663 20 - 190779 ---TCCGATTTGCAGG------------CAGTGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1782 20 + 55620 ---TCCGATTTGCAGG------------CAGTGAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782039 20 - 123690457 ---TGAGATTTGCAGG------------CAGTGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301929 20 - 204787373 ---CCAGATGTGCAGG------------CAGCGAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19106071 20 - 19675229 ---CCAGATGTGCAGG------------CAGTGAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342522 20 - 16847902 ---CCAGATGTGCAGG------------CAGCGAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321235 20 + 91754291 ---CCAGATGTGCAGG------------CAGCGAC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7322406 20 - 7796314 ---CCAGATGTGCAGG------------CAGCGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73795195 18 + 74750902 ---TCAGATTTGCAGG--------------GTGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247880 20 - 17725628 ---TCAGATTGACGGG------------GAGTGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335495 15 + 6778120 ---TCAGATTTGCAGG-----------------GA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 175675 24 + 608964 ---GTGAATTTTCAGG--------GCCCCAGTGAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32758630 32 + 98207768 ---CTGGATGGTCAATCGAGGGAGGCATCAGTGAG i mm10.chr16 I 6 C 0 s canFam3.chr33 2293235 16 - 31377067 TGGGTGAATTTCCAGG------------------- i canFam3.chr33 C 0 C 0 e aotNan1.NW_018492867v1 1222 34 - 21398 I e micMur3.chr1 88355347 90 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e manLeu1.NW_012102020v1 1366743 895 + 1977891 M e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=150959.000000 s hg38.chr3_KI270934v1_alt 19575 22 + 163458 GAGGCCAGGAGAG-CCTGCGGGT--------- s panPan2.chrUn_NW_014024201v1 81683 22 - 190779 GAGGCCAGGAGAG-CCTGTGGGT--------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1802 22 + 55620 GAGGCCAGGAGAG-CCTGCGGGT--------- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782059 22 - 123690457 GAGGCCAGGAGAG-CCTGCAGGA--------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301949 22 - 204787373 GAGGCCAGGAGAG-CCTACAGGA--------- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19106091 22 - 19675229 GAGGCCAGGAGAG-CCTACGGGA--------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342542 22 - 16847902 GAGGCCAGGAGAG-CCTACGGGA--------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321255 22 + 91754291 CAGGCCAGGAGAG-CCTACGGGA--------- i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7322426 22 - 7796314 GAGGCCAGGAGAG-CCTACGGGA--------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73795213 22 + 74750902 GAGGCCAGGAAAG-CCTGCGGGA--------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247900 22 - 17725628 GAGGCCAGGAAAG-CCTGCCGGA--------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335510 22 + 6778120 GAGGCCAGGAAAG-CCTGCGGGA--------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1256 22 - 21398 GAGGCCAGGGAAG-CCTGCGGGA--------- i aotNan1.NW_018492867v1 I 34 C 0 s otoGar3.GL873829 175699 22 + 608964 AAGGCCAGAAGGG-CCTTAGAGT--------- i otoGar3.GL873829 C 0 I 426 s mm10.chr16 32758662 20 + 98207768 GAAGCCAAGAGAC-TGTGCTA----------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2293251 31 - 31377067 -AGGCCGAGTGGGCCCTATGAGATGCGGTGGT i canFam3.chr33 C 0 C 0 e micMur3.chr1 88355347 90 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e manLeu1.NW_012102020v1 1366743 895 + 1977891 M e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=302254.000000 s hg38.chr3_KI270934v1_alt 19597 37 + 163458 TTCCAAGCAGGACCAGGGGAGGGCGCCAAGGAGTCGG-------- s panPan2.chrUn_NW_014024201v1 81705 37 - 190779 TTCCAAGCAGGACCAGGGAAGGGCGCCAAGGAGTCGG-------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1824 37 + 55620 TTCCAAGCAGGACCAGGGGAGGGCGCCAAGGAGTCGG-------- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782081 37 - 123690457 TTCCAAGCAGGACCAGGGGAGGGTGCCAAGGAGTCGG-------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2301971 37 - 204787373 TTCCAAGCAGGACCAGGGGAGGGCCCCAAGGAGTCGG-------- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19106113 37 - 19675229 TTCCAAGCAGGACCAGGGGAGAGCCCCAAGGAGTCGG-------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342564 37 - 16847902 TTCCAAGCAGGACCAGGGGAGGGCCCCAAGGAGTCGG-------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321277 37 + 91754291 TTCCAAGCAGGACCAGGGGAGGGCCCCAAGGAGTCGG-------- i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7322448 36 - 7796314 TTCCAAGCAGGACCC-GGGAGGGCCCCAAGGAGTCGG-------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73795235 37 + 74750902 TTCCAGGCAGGACCAGGGGAGGGCGCCAAGGAGTCAG-------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247922 37 - 17725628 TTCCAAGCAGGACCAGGGGAGGGCCCCAAGGAGTCAG-------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335532 36 + 6778120 TTCCAAGCAGGA-CAGGGGAGGGCGCCAAGGACTCAG-------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1278 36 - 21398 TTCCAAGCAGGACCA-GGGAGGGCGCCAAGGAGTCGG-------- i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88355437 37 + 114275543 TTCCAAGCAAGACCAGGTGAGGGCGCCAAGGAGCCGG-------- i micMur3.chr1 I 90 C 0 s proCoq1.NW_012133858v1 14766214 37 - 22200726 TTCCAAGAAAGACCAGGTGAGGGCGCCAAGGAGCCGG-------- i proCoq1.NW_012133858v1 N 0 I 252 s mm10.chr16 32758682 35 + 98207768 AGCCAATCAAGGCCA--TGTAGTATATATAGAGTTAG-------- i mm10.chr16 C 0 I 3 s canFam3.chr33 2293282 43 - 31377067 ATCCAGGCCAA--CAGGGAGGGCTGCCAAGAACGAAAGGGGGAGA i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2667743 1352 - 6579706 I e otoGar3.GL873829 175721 426 + 608964 I e manLeu1.NW_012102020v1 1366743 895 + 1977891 M e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=35440.000000 s hg38.chr3_KI270934v1_alt 19634 7 + 163458 --CAGCTGC s panPan2.chrUn_NW_014024201v1 81742 7 - 190779 --CAGCTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1861 7 + 55620 --CAGCTGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782118 7 - 123690457 --CAGCTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302008 7 - 204787373 --CAGCTGC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19106150 7 - 19675229 --CAGCTGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342601 7 - 16847902 --CAGCTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321314 7 + 91754291 --CAGCTGC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7322484 7 - 7796314 --CAGCTGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73795272 7 + 74750902 --CAGCTGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247959 7 - 17725628 --CAGCTGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335568 7 + 6778120 --CAGTTGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1314 7 - 21398 --CAGCCGT i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88355474 7 + 114275543 --TGGCTGC i micMur3.chr1 C 0 I 186 s mm10.chr16 32758720 5 + 98207768 --CATGT-- i mm10.chr16 I 3 C 0 s canFam3.chr33 2293325 7 - 31377067 CTCGTTT-- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e dasNov3.JH569502 2667743 1352 - 6579706 I e otoGar3.GL873829 175721 426 + 608964 I e manLeu1.NW_012102020v1 1366743 895 + 1977891 M e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=711483.000000 s hg38.chr3_KI270934v1_alt 19641 106 + 163458 GAGAAATATTTGGGACAAGGTTTCTCAAACTGGAGCCCGAGGGCCTCTAGGGAGTCCTAGGTTAAATTGGAG----------GAGTCTTCAAGTTTATCTGGAGAAAGGCCGTCTT s panPan2.chrUn_NW_014024201v1 81749 106 - 190779 GAGAAATATTTGGGACAAGGTTTCTCAAACTGGAGCCCGAGGGCCTCTAGGGAGTCCTAGGTTAAATTGGAG----------GGGTCTTCAAGTTTATCTGGAGAAAGGTCGTCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1868 106 + 55620 GAGAAATATTTGGGACAAGGTTTCTCAAACTGGAGCCCGAGGGCCTCTAGGGAGTCCTAGGTTAAATTGGAG----------GAGTCTTCAAGTTTATCTGGAGAAAGGCCGTCTT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782125 105 - 123690457 GAGAAATATTTGGGACAAGGTTTCTCAAACTGGAGCCCGAGGACCTCTAGGGAGTTATAGGTTAAATTCGAG----------GAGTCCTCAAGTTTATCTGGAGAAAGGCCAG-TT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302015 106 - 204787373 GAGAATTATTTGGGAcaaggtttctcaaaccggagcccaagaacctctagggagtcctaggttaaattcgag----------gagtcttcaagtttaaccggagaaaGGCCATCTT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19106157 106 - 19675229 GAGAAATATTTGGGACCAGGTTTCTCAAACCGGAGCCCAAGAACCTCTAGGGAGTCCTAGGTTAAATTCGAG----------GAGTCTTCACGTTTAACCGGAGAAAGGCCATCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342608 106 - 16847902 GAGAATTATTTGGGACAAGGTTTCTCAAACCGGAGCCCAAGAACCTCTAGGGAGTCCTAGGTTAAATTCGAG----------GAGTCTTCAAGTGTAACCGGAGAAAGGCCATCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321321 106 + 91754291 GAGAAATATTTGGGACAAGGTTTCTCAAACCCGAGCCCAAGAACCTCTAGGGAGTCCTAGGTTAAATTCGAG----------GAGTCTTCAAGTTTAACCGGAGAAAGGCCGTCTT i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7322491 106 - 7796314 GAGAAATATTAGGGACAAGGTTTCTCAAACCGCAGCCCAAGAACCTCTAGGGAGTCCTAGGTTAAATTCGAG----------GAATCTTCAGGTTTAACCGGAGAAAGGCCATCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73795279 105 + 74750902 GAGAATTGTTTGGGACAGGGTTTCTCAAACTGGAGCCTAAGGACCTCTAGGGCGGCCTAGGCTAAATTCGA-----------GGGTCTTTAAGTTTCTCTGGAGAAATGCCATCTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17247966 106 - 17725628 GAGAATCGTTTGGGACAAGGTTTCTCAAACGGGAGCCTAAGGGCCTCTAGGGCGGTCTAGGCTAAATTGGAG----------GGGTCTTCAAGTTTCTCTGGAGAAATGCCATCTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335575 106 + 6778120 GAGAACTGTTCCGGACAAGGTTTCTCAGACTGGAGCCTAAGGACCTCTAGGGCGGCCTCGGCTAAATTCGAG----------GGGTCTTCGAGTTTCTCTGGAGAAATGCCATCCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1321 106 - 21398 GAGAATTGTCTGGGCCGAGGTTTCTCACGCTGCAGCCTGAGGACCTCCAGGGCGGCCTAGGCTCAACTCGAG----------GGGTCTTCAAGTGTCTCTGGAGAAATGCCACCCT i aotNan1.NW_018492867v1 C 0 C 0 s mm10.chr16 32758725 116 + 98207768 GGGAAACACTTAAGACATAGTTTCCCAAACTGGAATCTGAGGACATACAGGGTGGCCTTGGGCAATTCCGGGGTGGGTGGGAGTGTCTTCAAGTTTATCTGAAGAAGTACCGCTGT i mm10.chr16 C 0 C 0 s canFam3.chr33 2293332 116 - 31377067 GAGAAATATTTAAGACAAGCTTTCTCAAGCTAGAACCCAAGGACATCTGAGGGGTCCAAGGACAAATTCGGGCGGGGGAGGGGTATCTACCCGTGTATCTGGACAAATACCGACTT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e micMur3.chr1 88355481 186 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e otoGar3.GL873829 175721 426 + 608964 I e manLeu1.NW_012102020v1 1366743 895 + 1977891 M e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=352273.000000 s hg38.chr3_KI270934v1_alt 19747 58 + 163458 AGGAAACAAGTCTCATTCCCTGAAAAGGGCTTTGCAGTTACTCATCTTCATTGCGCTG s panPan2.chrUn_NW_014024201v1 81855 58 - 190779 AGGAAACAAGTCTCATTCCCTGAAAAGGGCTTTGCAGTTACTCATCTTCATTGCGCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 1974 58 + 55620 AGGAAACAAGTCTCATTCCCTGAAAAGGGCTTTGTAGTTACTCATCTTCATTGCGCTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782230 58 - 123690457 AGGAAACAAGTCTCATTCCCTGAAAAGGGCTTTGCAGTTGCTCATCTTCATTGCGCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302121 58 - 204787373 AGGAAGCAAGTCTCATTCCCTGAAAAGGATTCTGCAGTCACGAATCTTCACTGCACTG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19106263 58 - 19675229 AGGAAGCAAGTCTCATTCCCTGAAAAGGGCTCTGCAGTCACGAATCTTCACTGCACTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342714 58 - 16847902 AGGAAGCAAGTCTCATTCCCTGAAAAGGGCTCTGCAGTCACGAATCTTCACTGCACTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321427 58 + 91754291 AGGAAGCAAGTCTCATTCCCTGAAAAGGGCTCTGCAGTCACGAATCTTCACTGCACTG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7322597 58 - 7796314 AGGAAACAAGTCTCACTCCCTGAAAAGGGCTCTGCAGTCACGAATCTTCACTGTACTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73795384 57 + 74750902 AGGAAACAAGTCTCGTTTCCTGAAAAGGACT-TGCAGTTTCTCATCTTCACTGTGTTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248072 57 - 17725628 AGGAAACAAGTGTCACTTCCTGAAAAGGATG-TGCAGTTGCTCAGCTTCCCTGGGTTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335681 57 + 6778120 GGGAAACAAGTCTCACTCCCTGAAAAGGACT-TGCAGTTGCTCATCTTCACTGCGTTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1427 57 - 21398 AGGAAACAAGTCTCATTTCCTGAAAAGGACT-TGCAGTTGCTCGTCTTCACTGCGTTG i aotNan1.NW_018492867v1 C 0 C 0 s mm10.chr16 32758841 57 + 98207768 AGGAAATAGGTGTCATTTTATGAAAAGGTCT-TTAAGTGACTAGTCTTTGCTGTTTTG i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e micMur3.chr1 88355481 186 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e canFam3.chr33 2293448 0 - 31377067 C e otoGar3.GL873829 175721 426 + 608964 I e manLeu1.NW_012102020v1 1366743 895 + 1977891 M e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=30030.000000 s hg38.chr3_KI270934v1_alt 19805 5 + 163458 GACtt s panPan2.chrUn_NW_014024201v1 81913 5 - 190779 GACtt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2032 5 + 55620 GACtt i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782288 5 - 123690457 CACtt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302179 5 - 204787373 GACtt i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19106321 5 - 19675229 GACTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342772 5 - 16847902 GACTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321485 5 + 91754291 GACtt i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7322655 5 - 7796314 GACTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73795441 5 + 74750902 GGCTT i calJac3.chr17 C 0 I 20 s cebCap1.NW_016107444v1 6335738 5 + 6778120 GACTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1484 5 - 21398 GACTT i aotNan1.NW_018492867v1 C 0 C 0 s mm10.chr16 32758898 5 + 98207768 GAGTT i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e micMur3.chr1 88355481 186 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e saiBol1.JH378146 17248129 0 - 17725628 C e canFam3.chr33 2293448 0 - 31377067 C e otoGar3.GL873829 175721 426 + 608964 I e manLeu1.NW_012102020v1 1366743 895 + 1977891 M e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=17270.000000 s hg38.chr3_KI270934v1_alt 19810 3 + 163458 ttg s panPan2.chrUn_NW_014024201v1 81918 3 - 190779 ttg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2037 3 + 55620 ttg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782293 3 - 123690457 ttg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302184 3 - 204787373 ttg i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19106326 3 - 19675229 TTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342777 3 - 16847902 TTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321490 3 + 91754291 ttg i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7322660 3 - 7796314 TTG i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 6335743 3 + 6778120 TTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1489 3 - 21398 TTG i aotNan1.NW_018492867v1 C 0 I 30 s mm10.chr16 32758903 3 + 98207768 TCG i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e micMur3.chr1 88355481 186 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e saiBol1.JH378146 17248129 0 - 17725628 C e calJac3.chr17 73795446 20 + 74750902 I e canFam3.chr33 2293448 0 - 31377067 C e otoGar3.GL873829 175721 426 + 608964 I e manLeu1.NW_012102020v1 1366743 895 + 1977891 M e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=6205.000000 s hg38.chr3_KI270934v1_alt 19813 2 + 163458 t-c s panPan2.chrUn_NW_014024201v1 81921 3 - 190779 ttc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2040 2 + 55620 t-c i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782296 2 - 123690457 t-c i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302187 2 - 204787373 t-c i rheMac8.chr2 C 0 I 1 s macNem1.NW_012014355v1 19106329 2 - 19675229 T-C i macNem1.NW_012014355v1 C 0 I 1 s cerAty1.NW_012004056v1 16342780 2 - 16847902 T-C i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 91321493 2 + 91754291 t-c i chlSab2.chr15 C 0 I 1 s colAng1.NW_012118932v1 7322663 2 - 7796314 T-C i colAng1.NW_012118932v1 C 0 I 927 s cebCap1.NW_016107444v1 6335746 2 + 6778120 T-C i cebCap1.NW_016107444v1 C 0 C 0 s mm10.chr16 32758906 2 + 98207768 T-C i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e aotNan1.NW_018492867v1 1492 30 - 21398 I e micMur3.chr1 88355481 186 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e saiBol1.JH378146 17248129 0 - 17725628 C e calJac3.chr17 73795446 20 + 74750902 I e canFam3.chr33 2293448 0 - 31377067 C e otoGar3.GL873829 175721 426 + 608964 I e manLeu1.NW_012102020v1 1366743 895 + 1977891 M e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=2169.000000 s hg38.chr3_KI270934v1_alt 19815 1 + 163458 t s panPan2.chrUn_NW_014024201v1 81924 1 - 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2042 1 + 55620 t i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782298 1 - 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302190 1 - 204787373 t i rheMac8.chr2 I 1 C 0 s macNem1.NW_012014355v1 19106332 1 - 19675229 T i macNem1.NW_012014355v1 I 1 C 0 s cerAty1.NW_012004056v1 16342783 1 - 16847902 A i cerAty1.NW_012004056v1 I 1 C 0 s chlSab2.chr15 91321496 1 + 91754291 t i chlSab2.chr15 I 1 C 0 s cebCap1.NW_016107444v1 6335748 1 + 6778120 T i cebCap1.NW_016107444v1 C 0 I 36 s mm10.chr16 32758908 1 + 98207768 T i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e aotNan1.NW_018492867v1 1492 30 - 21398 I e micMur3.chr1 88355481 186 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e saiBol1.JH378146 17248129 0 - 17725628 C e calJac3.chr17 73795446 20 + 74750902 I e canFam3.chr33 2293448 0 - 31377067 C e otoGar3.GL873829 175721 426 + 608964 I e colAng1.NW_012118932v1 7322665 927 - 7796314 I e manLeu1.NW_012102020v1 1366743 895 + 1977891 M e macFas5.chr2 192362332 14732 - 192460366 M e panTro5.chr3 2478927 6987 - 202621043 I a score=-374.000000 s hg38.chr3_KI270934v1_alt 19816 1 + 163458 a s panPan2.chrUn_NW_014024201v1 81925 1 - 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2043 1 + 55620 a i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782299 1 - 123690457 t i nomLeu3.chr11 C 0 I 2 s mm10.chr16 32758909 1 + 98207768 T i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e aotNan1.NW_018492867v1 1492 30 - 21398 I e micMur3.chr1 88355481 186 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106333 0 - 19675229 C e saiBol1.JH378146 17248129 0 - 17725628 C e calJac3.chr17 73795446 20 + 74750902 I e cebCap1.NW_016107444v1 6335749 36 + 6778120 I e canFam3.chr33 2293448 0 - 31377067 C e otoGar3.GL873829 175721 426 + 608964 I e colAng1.NW_012118932v1 7322665 927 - 7796314 I e manLeu1.NW_012102020v1 1366743 895 + 1977891 M e chlSab2.chr15 91321497 0 + 91754291 C e cerAty1.NW_012004056v1 16342784 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2302191 0 - 204787373 C e panTro5.chr3 2478927 6987 - 202621043 I a score=21968.000000 s hg38.chr3_KI270934v1_alt 19817 10 + 163458 tttttttttt s panTro5.chr3 200139806 10 + 202621043 tttttttttt i panTro5.chr3 n 6987 C 0 s panPan2.chrUn_NW_014024201v1 81926 10 - 190779 tttttttttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2044 9 + 55620 -tttttttct i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782302 10 - 123690457 tttttttttt i nomLeu3.chr11 I 2 C 0 s rheMac8.chr2 2302191 9 - 204787373 -ttttttttt i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19106333 9 - 19675229 -TTTTTTTTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16342784 9 - 16847902 -ttttttttt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321497 5 + 91754291 -ttttt---- i chlSab2.chr15 C 0 C 0 s mm10.chr16 32758910 10 + 98207768 TTCGCCCTTT i mm10.chr16 C 0 I 24 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e aotNan1.NW_018492867v1 1492 30 - 21398 I e micMur3.chr1 88355481 186 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e saiBol1.JH378146 17248129 0 - 17725628 C e calJac3.chr17 73795446 20 + 74750902 I e cebCap1.NW_016107444v1 6335749 36 + 6778120 I e canFam3.chr33 2293448 0 - 31377067 C e otoGar3.GL873829 175721 426 + 608964 I e colAng1.NW_012118932v1 7322665 927 - 7796314 I e manLeu1.NW_012102020v1 1366743 895 + 1977891 M e macFas5.chr2 192362332 14732 - 192460366 M a score=540.000000 s hg38.chr3_KI270934v1_alt 19827 3 + 163458 ttt- s panTro5.chr3 200139816 3 + 202621043 ttt- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81936 3 - 190779 ttt- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2053 3 + 55620 ttt- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782312 3 - 123690457 ttt- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302200 1 - 204787373 t--- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19106342 3 - 19675229 TTT- i macNem1.NW_012014355v1 C 0 M 5320 s cerAty1.NW_012004056v1 16342793 4 - 16847902 tttt i cerAty1.NW_012004056v1 C 0 I 1 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e mm10.chr16 32758920 24 + 98207768 I e aotNan1.NW_018492867v1 1492 30 - 21398 I e micMur3.chr1 88355481 186 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e saiBol1.JH378146 17248129 0 - 17725628 C e calJac3.chr17 73795446 20 + 74750902 I e cebCap1.NW_016107444v1 6335749 36 + 6778120 I e canFam3.chr33 2293448 0 - 31377067 C e otoGar3.GL873829 175721 426 + 608964 I e colAng1.NW_012118932v1 7322665 927 - 7796314 I e manLeu1.NW_012102020v1 1366743 895 + 1977891 M e chlSab2.chr15 91321502 0 + 91754291 C e macFas5.chr2 192362332 14732 - 192460366 M a score=298359.000000 s hg38.chr3_KI270934v1_alt 19830 135 + 163458 ttttgagatggagttttcgctcttgttgcccaggctggagtgcagtggcgcgatctcagctcactggaacctcagcctcccgggttcaagcaattctcctgcctcagcctcccgagtggctgggattacaggcat s panTro5.chr3 200139819 135 + 202621043 ttttgagacggagttttcgctcttgttgcccaggctgaagtgcagtggcacgatctcagctcactggaacctcagcctcccgggttcaagcgattctcctgcctcagcctcccgagtggctgggattacaggcat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81939 135 - 190779 ttttgagacggagttttcgctcttgttgcccaggctgaagtgcagtggcacgatctcagctcactggaacctcagcctcccgggttcaagcgattctcctgcctcagcctcccgagtggctgggattacaggcat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2056 134 + 55620 ttttgagacggagttttcgatcttgttgcccaggctgaagtgcagtggcacgatctcagctcac-ggaacctcagcctcctgggttcaagcgattctcctgcctcagcctcccgagtggctgggattacaggcat i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782315 135 - 123690457 ttttgagacggagtttccgttcttgttgcccagactggagtgcaatggcgcgatctcagctcactggaacctccgcctcctgggttcaagcaattctcctgcctcagcctccggagtagctgggattacaggcga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302201 134 - 204787373 ttttgaaacggagggtt-gctcttgtcgcccaggctggagtgcagtggagcaatcttggctcactgaaacctccacctcccgggttcaagagattctcctgcctcagcctcccgagtagctgggattacaggcat i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16342798 134 - 16847902 ttttgaaacggagggtt-gctcttgtcgcccaggctagagtgcagtggagcaatcttggctcactgcaacctccaccccccgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggcat i cerAty1.NW_012004056v1 I 1 C 0 s chlSab2.chr15 91321502 134 + 91754291 ttttgaaacggagggtt-gctcttgtcgcccaggctggagtgcagtggagcaatcttggctcactgaaacctccacctcccgggttcaagagattctcctgcctcagcctcccgagtagctgagattacaggcgc i chlSab2.chr15 C 0 I 132 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e mm10.chr16 32758920 24 + 98207768 I e aotNan1.NW_018492867v1 1492 30 - 21398 I e micMur3.chr1 88355481 186 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e saiBol1.JH378146 17248129 0 - 17725628 C e calJac3.chr17 73795446 20 + 74750902 I e cebCap1.NW_016107444v1 6335749 36 + 6778120 I e canFam3.chr33 2293448 0 - 31377067 C e otoGar3.GL873829 175721 426 + 608964 I e colAng1.NW_012118932v1 7322665 927 - 7796314 I e manLeu1.NW_012102020v1 1366743 895 + 1977891 M e macFas5.chr2 192362332 14732 - 192460366 M a score=1314.000000 s hg38.chr3_KI270934v1_alt 19965 1 + 163458 g s panTro5.chr3 200139954 1 + 202621043 g i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82074 1 - 190779 g i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2190 1 + 55620 g i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782450 1 - 123690457 a i nomLeu3.chr11 C 0 I 3 s rheMac8.chr2 2302335 1 - 204787373 g i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16342932 1 - 16847902 g i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e mm10.chr16 32758920 24 + 98207768 I e aotNan1.NW_018492867v1 1492 30 - 21398 I e micMur3.chr1 88355481 186 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e saiBol1.JH378146 17248129 0 - 17725628 C e calJac3.chr17 73795446 20 + 74750902 I e cebCap1.NW_016107444v1 6335749 36 + 6778120 I e canFam3.chr33 2293448 0 - 31377067 C e otoGar3.GL873829 175721 426 + 608964 I e colAng1.NW_012118932v1 7322665 927 - 7796314 I e manLeu1.NW_012102020v1 1366743 895 + 1977891 M e chlSab2.chr15 91321636 132 + 91754291 I e macFas5.chr2 192362332 14732 - 192460366 M a score=346193.000000 s hg38.chr3_KI270934v1_alt 19966 145 + 163458 cgccaccacacccggctaatttttgtattttaagtagagacagggcttctccatgttggtcaggctggtctcgaactcctgacctcgtgatcctcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgcacc s panTro5.chr3 200139955 145 + 202621043 cgccaccacacccggctaatttttgtattttaagtagagacagggcttctccattttggtcaggctggtctcgaactcctgacctcgtgatcctcctgcctcagcctcccaaagtgctgggattacaggcgtgagccactgcacc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82075 145 - 190779 cgccaccacacccggctaatttttgtattttaagtagagacagggcttctccattttggtcaggctggtctcgaactcctgacctcgtgatcctcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgcacc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2191 145 + 55620 cgccaccacacccggctaatttttgtattttaagtagagacagggcttctccatgttggtcaggctggtctcgaactcctgacctcttgatcctcccgcctcagcctcccaaagagctgggattacaggcgtgagccaccgcacc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782454 145 - 123690457 cgccaccacgcccggctaatttttgtattttaagtagagacagggcttctccatgttggtcaggctggtctcgaactcctgacctcatgatcctcctgcctcagcctcccaaagtgctgagattacaggcgtgagccaccgcgcc i nomLeu3.chr11 I 3 C 0 s rheMac8.chr2 2302336 145 - 204787373 cgccgccacaccaggctagtttttgtatttttagtagagacgaggtttctccatgttggtcaggctggtctcgaactcctaacctcatgatccacctgcctcggcctcccaaagttctgggattacaggcgagagccaccgcgtc i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16342933 145 - 16847902 cgccaccacaccaggctagtttttgtatttttagtagagacgaggtttctccatgttggtcaggctggtctcgaactcctgacctcgtgatccacccgcctcggcctcccaaagttctgggattacaggcgagagccaccgcgtc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321768 145 + 91754291 cgccaccacgcctggctaatttttgtatttttagtagagacgaagtttctccatgttggtcaggctggtctcgaactcctgacctcgtgatccacccgcctcggcctcccaaagttctgggattacaggcgagagccaccgcgtc i chlSab2.chr15 I 132 C 0 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e mm10.chr16 32758920 24 + 98207768 I e aotNan1.NW_018492867v1 1492 30 - 21398 I e micMur3.chr1 88355481 186 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e saiBol1.JH378146 17248129 0 - 17725628 C e calJac3.chr17 73795446 20 + 74750902 I e cebCap1.NW_016107444v1 6335749 36 + 6778120 I e canFam3.chr33 2293448 0 - 31377067 C e otoGar3.GL873829 175721 426 + 608964 I e colAng1.NW_012118932v1 7322665 927 - 7796314 I e manLeu1.NW_012102020v1 1366743 895 + 1977891 M e macFas5.chr2 192362332 14732 - 192460366 M a score=4490.000000 s hg38.chr3_KI270934v1_alt 20111 2 + 163458 ca s panTro5.chr3 200140100 2 + 202621043 ca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82220 2 - 190779 ca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2336 2 + 55620 ca i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782599 2 - 123690457 cg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302481 2 - 204787373 cg i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343078 2 - 16847902 cg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321913 2 + 91754291 cg i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 176147 2 + 608964 CA i otoGar3.GL873829 I 426 C 0 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e mm10.chr16 32758920 24 + 98207768 I e aotNan1.NW_018492867v1 1492 30 - 21398 I e micMur3.chr1 88355481 186 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e saiBol1.JH378146 17248129 0 - 17725628 C e calJac3.chr17 73795446 20 + 74750902 I e cebCap1.NW_016107444v1 6335749 36 + 6778120 I e canFam3.chr33 2293448 0 - 31377067 C e colAng1.NW_012118932v1 7322665 927 - 7796314 I e manLeu1.NW_012102020v1 1366743 895 + 1977891 M e macFas5.chr2 192362332 14732 - 192460366 M a score=14070.000000 s hg38.chr3_KI270934v1_alt 20113 5 + 163458 gcATA s panTro5.chr3 200140102 5 + 202621043 gcATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82222 5 - 190779 gcATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2338 5 + 55620 gcATG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782601 5 - 123690457 gcATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302483 5 - 204787373 TCATG i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343080 5 - 16847902 gcATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321915 5 + 91754291 CCATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1367647 5 + 1977891 GCATG i manLeu1.NW_012102020v1 M 895 C 0 s otoGar3.GL873829 176149 5 + 608964 ACATC i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e mm10.chr16 32758920 24 + 98207768 I e aotNan1.NW_018492867v1 1492 30 - 21398 I e micMur3.chr1 88355481 186 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e saiBol1.JH378146 17248129 0 - 17725628 C e calJac3.chr17 73795446 20 + 74750902 I e cebCap1.NW_016107444v1 6335749 36 + 6778120 I e canFam3.chr33 2293448 0 - 31377067 C e colAng1.NW_012118932v1 7322665 927 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M a score=153121.000000 s hg38.chr3_KI270934v1_alt 20118 30 + 163458 GACTTTTGTCTTTTAACCCTGAAAAGGATT s panTro5.chr3 200140107 30 + 202621043 GACTTTTGTCTTTTAACCCTGAAAAGGACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82227 30 - 190779 GACTTTTGTCTTTTAACCCTGAAAAGGATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2343 30 + 55620 GACTTTTGTCTTTTAACCCTGAAAAGGATT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782606 30 - 123690457 GGCTTTTGTCTTTTAACCCTGAAAAGGATT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302488 30 - 204787373 GACGTTTGTCATTTAACCCTGAAAAGGATT i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343085 30 - 16847902 GACGTTTGTCATTTAACCCTGAAAAGGATT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321920 30 + 91754291 GACGTTTGTCATTTAACCCTGAAAAGGATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1367652 30 + 1977891 GACGTTTGTCATTTAACCCTGAAAAGGATT i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 17248129 30 - 17725628 GGCTTTTGTCTTTTAACCCTGAAAAGGATC i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 88355667 30 + 114275543 GACTTTTGTCTTTTAACCCTTAAAAGAATT i micMur3.chr1 I 186 I 26 s otoGar3.GL873829 176154 30 + 608964 AGTCTTTGTCCTTTAACCCTTAAAAGAACT i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e mm10.chr16 32758920 24 + 98207768 I e aotNan1.NW_018492867v1 1492 30 - 21398 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e calJac3.chr17 73795446 20 + 74750902 I e cebCap1.NW_016107444v1 6335749 36 + 6778120 I e canFam3.chr33 2293448 0 - 31377067 C e colAng1.NW_012118932v1 7322665 927 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M a score=-921.000000 s hg38.chr3_KI270934v1_alt 20148 5 + 163458 GA----G--A----C s panTro5.chr3 200140137 5 + 202621043 GG----G--A----C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82257 5 - 190779 GG----G--A----C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2373 9 + 55620 GGCACTA--A----C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782636 7 - 123690457 GG----GGTA----C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302518 9 - 204787373 GG----G--ACTACC i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343115 9 - 16847902 GG----G--ACTACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321950 9 + 91754291 GG----G--GCTACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1367682 9 + 1977891 GG----G--ACTACC i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 17248159 5 - 17725628 GG----G--A----C i saiBol1.JH378146 C 0 I 5 s otoGar3.GL873829 176184 5 + 608964 GT----G--A----C i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e mm10.chr16 32758920 24 + 98207768 I e aotNan1.NW_018492867v1 1492 30 - 21398 I e micMur3.chr1 88355697 26 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e calJac3.chr17 73795446 20 + 74750902 I e cebCap1.NW_016107444v1 6335749 36 + 6778120 I e canFam3.chr33 2293448 0 - 31377067 C e colAng1.NW_012118932v1 7322665 927 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M a score=40039.000000 s hg38.chr3_KI270934v1_alt 20153 8 + 163458 -----TAAGAGAT s panTro5.chr3 200140142 8 + 202621043 -----TAAGAGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82262 8 - 190779 -----TAAGAGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2382 8 + 55620 -----TAAGAGAT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782643 8 - 123690457 -----TAAGAGAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302527 8 - 204787373 -----TAAGAGAT i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343124 8 - 16847902 -----TAAGAGAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321959 8 + 91754291 -----TAAAAGAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1367691 8 + 1977891 -----TAAGAGAT i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 17248169 8 - 17725628 -----TAAGAGAC i saiBol1.JH378146 I 5 C 0 s aotNan1.NW_018492867v1 1522 8 - 21398 -----TAAGAGAC i aotNan1.NW_018492867v1 I 30 C 0 s otoGar3.GL873829 176189 13 + 608964 TGCCACAACAGAT i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e mm10.chr16 32758920 24 + 98207768 I e micMur3.chr1 88355697 26 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e calJac3.chr17 73795446 20 + 74750902 I e cebCap1.NW_016107444v1 6335749 36 + 6778120 I e canFam3.chr33 2293448 0 - 31377067 C e colAng1.NW_012118932v1 7322665 927 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M a score=13232.000000 s hg38.chr3_KI270934v1_alt 20161 5 + 163458 TGAGA s panTro5.chr3 200140150 5 + 202621043 TGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82270 5 - 190779 TGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2390 5 + 55620 TGAGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782651 5 - 123690457 TGAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302535 5 - 204787373 GGCGA i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343132 4 - 16847902 GGCG- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321967 5 + 91754291 GGCGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1367699 5 + 1977891 GGCGA i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 17248177 5 - 17725628 TGAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335785 5 + 6778120 TGAGA i cebCap1.NW_016107444v1 I 36 C 0 s aotNan1.NW_018492867v1 1530 5 - 21398 TGAGA i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 176202 4 + 608964 -GCGG i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e mm10.chr16 32758920 24 + 98207768 I e micMur3.chr1 88355697 26 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e calJac3.chr17 73795446 20 + 74750902 I e canFam3.chr33 2293448 0 - 31377067 C e colAng1.NW_012118932v1 7322665 927 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M a score=24458.000000 s hg38.chr3_KI270934v1_alt 20166 4 + 163458 ATCG s panTro5.chr3 200140155 4 + 202621043 ATCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82275 4 - 190779 ATCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2395 4 + 55620 ATCG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782656 4 - 123690457 ATCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302540 4 - 204787373 ATCG i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343136 4 - 16847902 ATTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321972 4 + 91754291 ATCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1367704 4 + 1977891 ATCG i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 17248182 4 - 17725628 ATCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335790 4 + 6778120 ATCG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1535 4 - 21398 ATCG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 176206 4 + 608964 AGTA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32758944 4 + 98207768 ATCC i mm10.chr16 I 24 C 0 e proCoq1.NW_012133858v1 14766251 252 - 22200726 I e micMur3.chr1 88355697 26 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e calJac3.chr17 73795446 20 + 74750902 I e canFam3.chr33 2293448 0 - 31377067 C e colAng1.NW_012118932v1 7322665 927 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M a score=66748.000000 s hg38.chr3_KI270934v1_alt 20170 11 + 163458 TTTGCTGGTAT s panTro5.chr3 200140159 11 + 202621043 TTTGCTGGTAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82279 11 - 190779 TTTGCTGGTAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2399 11 + 55620 TTTGCTGGTAT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782660 11 - 123690457 GTTGCTGGTAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302544 10 - 204787373 TTTGCTGG-AT i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343140 11 - 16847902 TTTGCGGGTAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321976 11 + 91754291 TTTGCTGGTAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1367708 11 + 1977891 TTTGCGGGTAT i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 17248186 10 - 17725628 TT-GCTGGCAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335794 11 + 6778120 TTGGCTGGTAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1539 11 - 21398 TTTGCTGGTGT i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88355723 11 + 114275543 TTTGTTGGGAT i micMur3.chr1 I 26 C 0 s proCoq1.NW_012133858v1 14766503 11 - 22200726 TTTGTTGGTGT i proCoq1.NW_012133858v1 I 252 C 0 s otoGar3.GL873829 176210 10 + 608964 TTTGCTGGCA- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32758948 11 + 98207768 TATGGTGCTAT i mm10.chr16 C 0 C 0 e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e calJac3.chr17 73795446 20 + 74750902 I e canFam3.chr33 2293448 0 - 31377067 C e colAng1.NW_012118932v1 7322665 927 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M a score=479749.000000 s hg38.chr3_KI270934v1_alt 20181 46 + 163458 TCTGACAGCAGGACCTGTTT-------TTCTCCAAGCTGGGGAAGGATGAGAG s panTro5.chr3 200140170 46 + 202621043 TCTGACAGCAGAACCTGTTT-------TTCTCCAAGCTGGGGAAGGATGAGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82290 46 - 190779 TCTGACAGCAGAACCTGTTT-------TTCTCCAAGCTGGGGAAGGATGAGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2410 46 + 55620 TCTGACAGCAGGACCTGTTT-------TTCTCCAAGCTGGGGAAGGATGAGAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782671 46 - 123690457 TCTGACAGCAGGACCTGTTT-------TTCTCCAAGCTGGGGAAGGATGAGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302554 46 - 204787373 TCTGCCAGCAGGACCTGTTT-------TCCTCCGAGCTGGGGAAGGATGAGAG i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343151 46 - 16847902 TCTGACAGCAGGACCTGTTT-------TTCTCCGAGCTGGGGAAGGATGAGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91321987 46 + 91754291 TCTGCCAGCAGGACCTGTTT-------TCCTCCGAGCTGGGGAAGGATGAGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1367719 46 + 1977891 TCTGACAGCAGGACCTGTTT-------TTCTCCGAGCTGGGGAAGGATGAGAG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73795466 46 + 74750902 TCTGACAGCAGGACCTGTTT-------TTCTCCAAGCTGGGGAAGGATGCCAG i calJac3.chr17 I 20 C 0 s saiBol1.JH378146 17248196 46 - 17725628 TCTGACAGCAGGACCCGTTT-------TTCTCCAGGCTGGGGAAGGATACCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335805 46 + 6778120 CCTGACAGCAGGACCTGTTT-------TCCTCCAAGCTGGGGAGGGGTGCCAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1550 46 - 21398 TCTGACAGCAGGACCTGTTT-------TTCTCCAAGCTGGGGAAGGATGCCAG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88355734 46 + 114275543 TCTGACAGCGGGACCTGTTT-------TTCTCCAAGCTGGGGAAGGATGAGAG i micMur3.chr1 C 0 I 146 s proCoq1.NW_012133858v1 14766514 46 - 22200726 TCTGACAGCAGGGCCTGTTT-------TTCTCCAAGCTGGCGAAGGATGAGAG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 176220 46 + 608964 TCTGACAGCAGGACCAGCTT-------TTCCCCAAGCTGGGGAAGGACGAGAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32758959 53 + 98207768 CCTAACAGCAGGACGGTCATGTCAGGATGCTCTAACCTGAGGGATGATGAGGG i mm10.chr16 C 0 C 0 e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e canFam3.chr33 2293448 0 - 31377067 C e colAng1.NW_012118932v1 7322665 927 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M a score=130726.000000 s hg38.chr3_KI270934v1_alt 20227 20 + 163458 GCGCAGTTTAGGGAGTAAAA s panTro5.chr3 200140216 20 + 202621043 GCGCAGTTTAGGGAGTAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82336 20 - 190779 GCGCAGTTTAGGGAGTAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2456 20 + 55620 GCATAGTTTAGGGAGTAAAA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782717 20 - 123690457 GCGCAGTTTAGGGAGTAAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302600 19 - 204787373 GCGCAGTTC-GGGAGTAAAA i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343197 19 - 16847902 GCGCAGTTC-GGGAGTAAAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322033 19 + 91754291 GCGCAGTTC-GGGAGTGAAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1367765 19 + 1977891 GCGCAGTTC-GGGAGTAAAA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73795512 20 + 74750902 GCACAGTGTAGGGAGTAAAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248242 20 - 17725628 GCACAGTGTAGGGAGCAAAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335851 20 + 6778120 GCGCAGGGCAGGGAGTAAAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1596 20 - 21398 GCGCAGTTTAGGGAGTAAAA i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 14766560 20 - 22200726 TCCCAGGTTGGGGAGTAAAA i proCoq1.NW_012133858v1 C 0 I 197 s otoGar3.GL873829 176266 19 + 608964 TCCCAGGCT-GGGAGTAAAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32759012 19 + 98207768 TTCCAGCTG-AGAAGTAAAC i mm10.chr16 C 0 C 0 e micMur3.chr1 88355780 146 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e canFam3.chr33 2293448 0 - 31377067 C e colAng1.NW_012118932v1 7322665 927 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M a score=763278.000000 s hg38.chr3_KI270934v1_alt 20247 158 + 163458 TGACCACATGCATTTAATGTGGGTGGAGAGGGAGCGAGAAGC-----ACCCTAGATGGCT----------GCCTCTGGGGCCCTCGGGGAACACAGGACAGGTGT-GGGCAGCCTGCAGGGAGCGCTCTGGGATCCCTTTCAGCCCTAAAGAAGGCCCAGGCCCACTTGGACTT s panTro5.chr3 200140236 158 + 202621043 TGACCACATGCATTCAATGTGGGTGGAGAGGGAGTAAGAAGA-----ACCCTCGATGGCT----------GCCTCTGGGGCCCTCGGGGAACACGGGACAGGTGT-GGGCAGCCTGCGGGGAGCGATCTGGGATCCCTTTCAGCCCTAAAGAAGGCCCAGGCCCACTTGGACTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82356 158 - 190779 TGACCACATGCATTCAATGTGGGTGGAGAGGGAGTAAGAAGA-----ACCCTCGATGGCT----------GCCTCTGGGGCCCTCGGGGAACACGGGACAGGTGT-GGGCAGCCTGCGGGGAGCGATCTGGGATCCCTTTCAGCCCTAAAGAAGGCCCAGGCCCACTTGGACTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2476 156 + 55620 TGACCACATGCATTCAATGTGGGTGGAGAGGGAGCGAGAAGC-----ACCCT-GATGGCT----------GACTCT-GGGCCCTTGGGGAACACGGGACAGGTGT-GGGCAGCCTGCGGGGAGCGCTCTGGGATCCCTTTCAGCCCTAAAGAAGGCCCAGGCCCACTTGGACTT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782737 158 - 123690457 TGACCACATGCATTCAGTGTGGGTGGAGAGGGAGCAACAAGA-----ACCCTCGATGGCT----------GCCTCTGGGGCCCTCGGGGAACAGGGGACAGGTGC-GGGCAGTGTGCGGGGAGCACTCTGGGATCCCTTTCAGCCCTAAAGCAGGCCCAGGCCCACTTGGGCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302619 156 - 204787373 TGACCACATGCGTTCGGTGTGGGTGGAGAGGGAGCCACAAGA-----GCCCTTGCTGGCT----------GCCTCTGGGGCCCTCGGGGAAC--GGGGCAGGTGC-GCGCAGCGCGCGGGGAGGGCTCTGGGATCCCTTTCGGCCCTAAAGAAGGCCCAGGCCCCCTCGGACGT i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343216 156 - 16847902 TGACCACATGTGTTCGGTGTGGGTGGAGAGGGAACCACAAGA-----GCCCTTGCTGGCT----------GCCTCTGGGGCCCTCGGGGAAC--GGGGCAGGTGC-GCGCAGCGCGCGGGGAGCGCTCTGGGATCCCTTTCGGCCCTAAAGAAGGCCCAGGCCCCCTCGGACGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322052 155 + 91754291 TGACCACATGCGTTCGGTGTGGGTGGAGAGGGAGCCACAAGA-----GCCCTTGCTGGCT----------GCCTCTGGGGCCCTC-GGGAAC--GGGGCAGGTGC-GCGCAGCGCGCGGGGAGCGCTCTGGGATCCCTTTCGGCCCTAAAGAAGGCCCAGGCCCCCTCGGACGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1367784 155 + 1977891 TGACCACATGTGTTCGGTGTGGGTGGAGAGGGAACCACAAGA-----GCCCTTGCTGGCT----------GCCTCTGGGGCCCTC-GGGAAC--GGGGCAGGTGC-GCGCAGCGCGCGGGGAGCGCTCTGGGATCCCTTTCGGCCCTAAAGAAGGCCCAGGCCCCCTCGGACGT i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73795532 152 + 74750902 TGACGGCGTGCGCTCAACGCGGGTGGAGAGGGAGC---AAGA-----ACCCTGGATGGCTGGCTGGCAGGGCCTCTGGGGCCATCGGGGTGGAGAGGGCAGGTGCGGGGCAGCGTGGGGGG--GTCTCTGGGATCCCTTCCA------------GCCCAGGCCCACTTGGACGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248262 155 - 17725628 TGAC-----GCGTTCAACGCGGGTGGAGAGGGAGC---AAGA-----ACCCTTGA----CGGCTGGCAGGGCCTCTGGGG-CACCGGGGAACAGAGGGCAGGTGCAGGGCAGCCTGGGGGGA-GTCTCTGGGATCCCTTCCAGCCCTAAAGAAGGCCCAGGCCCACCTGGACTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6335871 161 + 6778120 TGACGACGTGTGCTCCATGC-GGTGGAGAGCGAGC---AAGA-----ACCCTTGACGGCTGGCTGGCAGGGCCTCTGGGGCCGTC-GGGAACACAGGGCAGGTGC-GGGCAGCGTGGGGGG--GTCTCTGGGACCCCGTCCAGCCCTAAAGAAGGCCCAGGCCCACTTGGACTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1616 164 - 21398 TGACGACGTGTGTCCAGTGCGGGTGGAGAGGGTGC---AAGA-----ACCCTTGATGGCTGGCTGGCAGGGCCTCTGGGGCCGTCGGGGAACAGAGGGCAGGTGCGGGGCAGCGTGGGGGA--GTCTCTGGGATCCCTTCCAGCCCTAAAGAAGGCCCAGGCCCACTTGGACTT i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 176285 104 + 608964 ---TGAGATGTATTAAATTCTAGTGGAGAGGGAG----AGGA-----GACTGGGATAGTT----------TCC---------------------------------GGAC------TGGGGAAAGCTCCAGTATCCCTTTCAGCCCTGAAGA---------CCCCTGCGGACTT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32759031 128 + 98207768 --------------AGATGTGTATGGAGAGGTGGAACGAAGAGTAAGGTCTACGGGAGTT----------GCTTCT-----------GAAAGAGGAGACAGGTTA-G----------GGGAAGCTCTCTCAGGGTCCTCCTGAACCTGAAAGGAGGGATGACCCTCAAGGACTC i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14766580 197 - 22200726 I e micMur3.chr1 88355780 146 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e canFam3.chr33 2293448 0 - 31377067 C e colAng1.NW_012118932v1 7322665 927 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M a score=66450.000000 s hg38.chr3_KI270934v1_alt 20405 7 + 163458 CCTGCTC s panTro5.chr3 200140394 7 + 202621043 CCTGCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82514 7 - 190779 CCTGCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2632 7 + 55620 CCTGCTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782895 7 - 123690457 CCTGCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302775 7 - 204787373 CCTGCTC i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343372 7 - 16847902 CCTGCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322207 7 + 91754291 CCTGCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1367939 7 + 1977891 CCTGCTC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73795684 7 + 74750902 CCTGCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248417 7 - 17725628 CCTGCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6336032 7 + 6778120 CCTGCTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1780 7 - 21398 CCTGCTC i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88355926 7 + 114275543 CCTACTC i micMur3.chr1 I 146 C 0 s otoGar3.GL873829 176389 7 + 608964 CCCACTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32759159 7 + 98207768 TGCTCTC i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14766580 197 - 22200726 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e canFam3.chr33 2293448 0 - 31377067 C e colAng1.NW_012118932v1 7322665 927 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M a score=531876.000000 s hg38.chr3_KI270934v1_alt 20412 60 + 163458 TTCTCTGTC---CTGGCCCAGGAGTTTCCCTCTTCCCCTATGGGGCAGGCGCCGGGGACCTGG s panTro5.chr3 200140401 60 + 202621043 TTCTCTGTC---CTGGCCCAGGAGTTTCCCTCTTCCCCTATGGGGCAGGCGCCGGGGACCTGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82521 60 - 190779 TTCTCTGTC---CTGGCCCAGGAGTTTCCCTCTTCCCCTATGGGGCAGGCGCCGGGGACCTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2639 59 + 55620 TTCTCTGTC---CTGGCCCAGGAGTTTCCCTCTT-CCCTATGGGGCAGGCGCCGGGGACCTGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782902 45 - 123690457 TT------------------GGAGTTTCCCTCTTCCCCTACGGGGCAGGCACCGGGGACCTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302782 59 - 204787373 GTCTTTGTC---CTGG-CCAGGAGCTTCCCTCCTCCCCTACGGGGTCGGCGCCGGGGACCTGG i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343379 59 - 16847902 GTCTTTGTC---CTGG-CCAGGAGCTTCCCTCCTCCCCTACGGGGCCGCCGCCGGGGACCTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322214 59 + 91754291 TTCTTTGTC---CTGG-CCAGGAGCTTCCCTCCTCCCCTACGGGGCCGGTGCCGGGGACCTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1367946 59 + 1977891 TTCTTTGTC---CTGG-CCAGGAGCTTCCCTCCTCCCCTACGGGGCCGGCGCCGGGGACCTGG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73795691 60 + 74750902 TTCTTTGTC---CTGGCCCAGGAGTTTCCCTCCTCCCCTACGGGTCGGGCGCTGGGGACCTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248424 60 - 17725628 TTCTTTGTC---CTGGCCCAGGAGTTTCCCTCCTCCCCTACGGGTCGGGCGCTGGGGACCTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6336039 60 + 6778120 TTCTTTGTC---CTGGCCCAGGAGTTTCCCTCCTCCCCTACGGGTCGGGCGCTGGGGACCTGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1787 60 - 21398 TTCTTTGTC---CTGGCCCAGGAGTTTCCCTCCTCCCCTACGGGTCGGGCGCTGGGGACCTGG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88355933 60 + 114275543 TTCTTTGCC---CTGGCCCAGGCGTTTCCCTCTTCCGCTATGGGCCGCGCGTCGGAGACCGGA i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 176396 60 + 608964 TCCTTTGTC---CTGGCCCAGGTGTTTCCCTCTTCCCCTATGGGCAAAGCGCTGGCGACCTGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32759166 60 + 98207768 TCCTCTGTC---CTTGTCTAGGCATTTCCCTCTTCCCCTACGGGTCTGAAGTCGGAGACCAGA i mm10.chr16 C 0 I 3 s canFam3.chr33 2293448 63 - 31377067 TCCTTTGTCCTGCTGGCCCAGGCGTTTCCCTCTTCCCTTACGGGCCAAGTGTTGGAGACAGGG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14766580 197 - 22200726 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e colAng1.NW_012118932v1 7322665 927 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M a score=1152005.000000 s hg38.chr3_KI270934v1_alt 20472 100 + 163458 AGTTCGTCAGGAGGACCGTGGACTTCACCTCCCCACTCTTCAAGCCGGCGACTGGCTTCCCCCTTGGCTCCTCTCTCCGTGATTCCCTCTACGTGAGTCC s panTro5.chr3 200140461 100 + 202621043 AGTTCGTCAGGAGGACCGTGGACTTCACCTCCCCACTCTTCAAGCCGGCGACAGGCTTCCCCCTTGGCTCCTCTCTCCGTGATTCCCTCTACGTGAGTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82581 100 - 190779 AGTTTGTCAGGAGGACCGTGGACTTCACCTCCCCACTCTTCAAGCCGGCGACAGGCTTCCCCCTTGGCTCCTCTCTCCGTGATTCCCTCTACGTGAGTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2698 100 + 55620 AGTTCGTCAGGAGGACCGTGGACTTCACCTCCCCACTCTTCAAGCCGGCGACTGGCTTCCCCCTTGGCTCCTCTCTCCGTGATTCCCTCTACGTGAGTCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2782947 100 - 123690457 AGTTCGTCAGGAGGACTGTGGACTTCACCTCCCCACTCTTCAAGCCAGCGACTGGCTTCCCCCTCGGCTCCTCTCTCCGTGATTCCCTCTACGTGAGTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302841 100 - 204787373 AGTTCGTCAGGAGGACCGTGGACTTCACCTCCCCGCTCTTCAGGCCCGCGACTGGCTTCCCCCTCGGCTCCTCGCTGCGCGATTCCCTCTACGTGAGTCC i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343438 100 - 16847902 AGTTCGTCAGGAGGACCGTGGACTTCACCTCCCCGCTCTTCAGGCCCGCGACTGGCTTCCCCCTCGGCTCCTCGCTGCGCGATTCCCTCTACGTGAGTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322273 100 + 91754291 AGTTCGTCAGGAGGACCGTGGACTTCACCTCCCCGCCCTTCAGGCCCGCGACTGGCTTCCCCCTCGGCTCCTCGCTGCGCGATTCCCTCTACGTGAGTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368005 100 + 1977891 AGTTCGTCAGGAGGACCGTGGACTTCACCTCCCCGCTCTTCAGGCCCGCGACTGGCTTCCCCCTCGGCTCCTCGCTGCGCGATTCCCTCTACGTGAGTCC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73795751 99 + 74750902 AGTTCGTCAGGAGGACTGTGGACTTCACCTCCCCACTCTTCAAGCCCCTGACTGGCTTTCCCCTCGGCTCTTCTCTCCGGGATTCTCTCTATGTGAGTT- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248484 100 - 17725628 AGTTCGTCAGGAGGACTGTGGACTTCGCCTCCCCGCTCTTCAAGCCCCTGACTGGCTTTCCCCTTGGCTCCTCTCTCCGGGATTCCCTCTACGTGAGTTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6336099 100 + 6778120 AGCTCGTCAGGAGGACTGTGGACTTCACCTCCCCACTCTTCAAGCCCCTGACTGGCTTTCCCCTCGGCTCCTCTCTCCGGGATTCCCTCTACGTGAGTTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1847 100 - 21398 AGTTCGTCAGGAGGACTGTGGACTTCACCTCCCCGCTCTTCAAGCCCCTGACTGGCTTTCCCCTCGGCTCCTCTCTCCGGGATTCCCTCTACGTGAGTTC i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88355993 100 + 114275543 AGCTTGTCAGGAGGACTCAGGACTTCACCTCACGGCTCTTCCAGCCCCAGATCGGCTTCCCCCTGGGCTCCTCTCTCCGGAATTCCCTCTACGTGAGTCC i micMur3.chr1 C 0 I 1133 s proCoq1.NW_012133858v1 14766777 100 - 22200726 AGTTTGTCAGGAGGGCCGAGGACTTCACCTCACCGCTCTTCGAGCCCCAGATCGGCTTCCCCCTCGGCTCCTCTCTCCGGGATTCCCTCTACGTGAGTCC i proCoq1.NW_012133858v1 I 197 I 320 s otoGar3.GL873829 176456 100 + 608964 AGTTTGTCAGGAGGATGGAGGACTTCACCTCACCGCTCTTCAAGCCCCAGATCGGCTTCCCTCTCGGCTCCTCTCTTCGGGATTCTCTCTATGTGAGTCC i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32759229 97 + 98207768 TGTTTGCCAGGA---CTGTGGATTTTAACTCACCAATCTTCAAGATCCTGATTGGCTTTCCCCTCGGTTCCTCCCTGCGGGATTCCTTCTACGTGAGTCT i mm10.chr16 I 3 I 20 s canFam3.chr33 2293511 100 - 31377067 AGTTTGTCGAGAGGACCACGGACTTCACCTCACCACTCTTCAGGCCCCAGATTGGCTTCCTTCTTGGCTCCTCTCTCCGGGATTACCTCTATGTGAGTCC i canFam3.chr33 C 0 I 22 e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e colAng1.NW_012118932v1 7322665 927 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M a score=507684.000000 s hg38.chr3_KI270934v1_alt 20572 126 + 163458 G-GGCTGCGGCCCGCGCA-----------GCCTGAACTCCCAG-------GGC-CCACTTCTCTCTCCTG--CTTCGAGACGG------------------AACCCAGAGGAAGCGGGAATG---GAAGCAGC------CTTGGCTGGGCCCCT-----CGTCCATCCCC----ACAGCCTCC-T s panTro5.chr3 200140561 126 + 202621043 G-GGCTGCGGCCCGCGCA-----------GCCTGAACTCCCCG-------GGC-CCACTTCTCTCTCCTG--CTTCGAGATGG------------------AACCCAGAGGCAGAGGGAATG---GAAGCAGC------CTTGGCTGGGCCCCT-----CGTCCACCCCC----GCAGCCTCC-T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82681 126 - 190779 G-GGCTGCGGCCCGCGCA-----------GCCTGAACTCCCCG-------GGC-CCACTTCTCTCTCCTG--CTTCGAGACGG------------------AACCCAGAGGCAGAGGGAATG---GAAGCAGC------CTTGGCTGGGCCCCT-----CGTCCACCCCC----ACAGCCTCC-T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2798 126 + 55620 G-GGCTGCGGCCCGCGCA-----------GCCTGAACTCCCCG-------GGC-CCACTTCTCTCTCCAG--CTTCGAGAGGG------------------AACCCAGAGGAAGCGGGAATG---GAAGCAGC------CTTGGCTGGGCCCCT-----CGTTCACCCCC----ACAGCCTCC-T i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783047 126 - 123690457 G-GGCTGCGGCCTATGCG-----------GCCTGAGCTCCCTG-------GGC-CCACTTCTCTCTCCAG--CTTGGAGATGG------------------AACCCAGAGGAAGCGGGAGTG---GAAGCAGC------CTTGGCTGGGCCCCT-----CGTCCACCCCC----ACAGCCTCC-T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2302941 113 - 204787373 C-GGCGGCG--------------------GCCTCGGCTCCCTG-------GG--CCGCTTCTCTCCCCAG--CTTCGAGAC--------------------AACCCAGAGGAAGCAGGAGTG---GAGGCAGC------CTCGGCGGGGCCCCT-----CGTGCG-CCCC----ACAGCCCCC-T i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343538 113 - 16847902 C-GGCGGCG--------------------GCCTCAGCTCCCTG-------GG--CCGCTTCTCTCCCCAG--CTTCGAGAC--------------------AACCCAGAGGAAGCAGGAGTG---GAGGCAGC------CTCGGCGGGGCCCCT-----CGTGCG-CCCC----ACAGCCCCC-T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322373 113 + 91754291 C-GGCGGCG--------------------GCCTCAGCTCCCTG-------GG--CCGCTTCTCTCCCCGG--CTTCGAGAC--------------------CACCCAGAGGAAGCAGGAGAG---GAAGCAGC------CTCGGCGGGGCCCCT-----CGTGCG-CCCC----ACAGCCCCC-T i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368105 113 + 1977891 C-GGCGGCG--------------------GCCTCAGCTCCCTG-------GG--CCGCTTCTCTCCCCAG--CTTCGAGAC--------------------AACCCAGAGGAAGCAGGAGTG---GAGGCAGC------CTCGGCGGGGCCCCT-----CGTGCG-CCCC----ACAGCCCCC-T i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73795850 127 + 74750902 --CACTGAG-GCCGCACA-----------GCCTGAGCTCCCTG-------GGC-CCGCTTCTCTCTCCAG--CTTCAGGATGG------------------AACCC--AGGAACTGGGAGTG---GAAGCAGC------CTTGGCTGGGCCTCTAGTTTCGTTCACCTCC----ACAGCCTTC-T i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248584 117 - 17725628 GCCACTGCG-ACCGCGCA-----------GCCTGAGCTCCCTG-------GGC-CCGCTTCTCTCTCCAG--CTTCACGATGG------------------AACCC--AGGAACTGGCAGTG---GAAGCAGC------CCTGGCTGGGCCCCTGGTTCAGTTCACCT----------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6336199 129 + 6778120 TCCACTGCG-GCCGCGCA-----------GCCTGAGCTCCCTG-------GGC-CCACTTCTGTCTCCAG--CTTCACGATGG------------------AGCCC--GGGAACTGGGGGTG---GAGGCAGC------CTTGGCCGGGCCTCTAGTTTAGTGCACCTCC----ACAGCCTTC-T i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1947 129 - 21398 TCCACTGCG-GCCGCGCA-----------GCCTGAGCTCCCTG-------GGC-CCGCTTCTCTCTCCAG--CTTCACGATGG------------------AACCC--AGGAACTGGGAGTG---GAAGCAGC------CTTGGCTGGGCCCCTAGTTTAGTTCACCTCC----ACAGCCTTC-T i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 176557 141 + 608964 -CCACTGCAGCCCCAGTACAAGACTGGTGGCCTGGGCAGCCTG-------GGC-CTGCTTCTCTCCCCAG--CTCTGAGACAGC-------------CCATGACCCAGAGGAAG-GGAAATG---GAAGCACC------ATTGTC-GGGCACCC-----AGCTTCTATCT----GCAGCCTCCTT i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32759346 117 + 98207768 T-GTCTGTG--------------------GCCTGTGTTCTTTGTTCTTTTGGG-CCCTGTTTCTCTGCAG-------AGATGGC-------------CCATGACAGAGCAGAAGAAAGAATG---AGGTCA--------CTTTGCTGTACAACA-----CTTTTG----------TAGCCTTCTT i mm10.chr16 I 20 C 0 s canFam3.chr33 2293633 148 - 31377067 -GACCTGTG--------------------ACCTGTGCTTCCCA-------GACTCTACTTCTCTCTCTAGGGCTTGACGATGGCCCTGTGACCATGACCATGGCCCAGAGGAAGGAAGTGTGCGACAAGCAACTGGGAGCTAGGCAAGGCCCTC--------CTACCCTCAGGGACAAGTGTC-T i canFam3.chr33 I 22 C 0 e proCoq1.NW_012133858v1 14766877 320 - 22200726 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2667743 1352 - 6579706 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e colAng1.NW_012118932v1 7322665 927 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M a score=62036.000000 s hg38.chr3_KI270934v1_alt 20698 9 + 163458 TAATGTCAG s panTro5.chr3 200140687 9 + 202621043 TAATGTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82807 9 - 190779 TAATGTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2924 9 + 55620 TAATGTCAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783173 9 - 123690457 TAATGTCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303054 9 - 204787373 TAATGTCAG i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343651 9 - 16847902 TAATGTCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322486 9 + 91754291 TAATGTCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368218 9 + 1977891 TAATGTCAG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73795977 9 + 74750902 TACTGTCAG i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 6336328 9 + 6778120 TGATGTCAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2076 9 - 21398 TAATGTCAG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 176698 9 + 608964 TACCACCAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32759463 9 + 98207768 TTATGTCAG i mm10.chr16 C 0 I 67 s canFam3.chr33 2293781 1 - 31377067 T-------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2669095 9 - 6579706 TAATATCAA i dasNov3.JH569502 I 1352 C 0 e proCoq1.NW_012133858v1 14766877 320 - 22200726 I e micMur3.chr1 88356093 1133 + 114275543 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e saiBol1.JH378146 17248701 0 - 17725628 C e colAng1.NW_012118932v1 7322665 927 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M a score=180519.000000 s hg38.chr3_KI270934v1_alt 20707 49 + 163458 GCCTCTGCCTGA-GGAAC-----ACAGGGTGCCAGGCGAGGGCTGC--CCACCTGCT--- s panTro5.chr3 200140696 43 + 202621043 GCCTCTGCCTGA-GGAAC-----ACCGGGTGCCAGGCGAGGGCTGC--CCA--------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82816 43 - 190779 GCCTCTGCCTGA-GGAAC-----ACCGGGTGCCAGGCGAGGGCTGC--CCA--------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2933 49 + 55620 GCCTCTGCCTGA-GGAAC-----ACCGGGTGCCAGGCGAGGGCTGC--CCACCTGCT--- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783182 49 - 123690457 GCCTCTGCCCGA-GGAAC-----ACCGGGTGCCAGGCGAGGGCTGC--CCACCTGCT--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303063 47 - 204787373 GCGTCTGCC-GA-GGAAC-----ACGGGGCGCCAGGCGAGGGCGG---ACGCCTGCT--- i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343660 47 - 16847902 GCGTCTGCC-GA-GGAAC-----ACGGGGCGCCAGGCGAGGGCGG---ACGCCTGCT--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322495 47 + 91754291 GCGTCTGCC-GA-GGAAC-----ACGGGGCGCCAGGCGAGGGCGG---ACGCCTGCT--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368227 47 + 1977891 GCCTCTGCC-CA-GGAAC-----ACGGGGCGCCAGGCGAGGGCGG---ACGCCTGCT--- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73795986 49 + 74750902 GCCTCTGGCCGA-GTAAC-----ACGGGGAGCCAGGCGAAGGCTGC--CCACCTGCA--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248701 53 - 17725628 -CCTCCAGCCGA-GCAGCCGGGAGCCGGGAGCCAGGCGAAGGCTGC--CCGCCCATG--- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6336337 49 + 6778120 GCCTCTAGCCAA-GCAAC-----ACGGGGTGCCAGGCGAAGGCTGC--CCACCTGCA--- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2085 49 - 21398 GCCTCCAGCCGA-GCAAC-----ACGGGGAGCCGGGCGAAGGCTGC--CCACCTGCA--- i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 176707 50 + 608964 GGCTCTGGCTGAGGGAAG-----GCTGGATTCCCTCTGAGAGGGCC--CCCTCTCCT--- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2293782 30 - 31377067 TACCTTACTATA-GAGGT-----CTCGGGGTCCAGT------------------------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2669104 54 - 6579706 GGGACTAACTGA-GGAAG-----ACAGGCAGCTAGGCAAGGGGTCCTGACCCCTGTGGAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14766877 320 - 22200726 I e mm10.chr16 32759472 67 + 98207768 I e micMur3.chr1 88356093 1133 + 114275543 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e colAng1.NW_012118932v1 7322665 927 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M a score=249172.000000 s hg38.chr3_KI270934v1_alt 20756 62 + 163458 GG--------------------------------------------------GCCCACCGCTGCTTCTGCGGGGCCTTCTC-------AGGAGTAAAAAG-CTACACTTGGGAAACTGGA s panTro5.chr3 200140739 60 + 202621043 ----------------------------------------------------ACCCACCGCTGCTTCTGCGGGGCCTTCTC-------AGGAGTAAAAAG-CTACTCTTGGGGAACTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82859 60 - 190779 ----------------------------------------------------ACCCACCGCTGCTTCTGCGGGGCCTTCTC-------AGGAGTAAAAAG-CTACTCTTGGGGAACTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 2982 62 + 55620 GG--------------------------------------------------GCCCACCGCTGCTTCTGCGGTGCCTTCTC-------AGGGGTGAAAAG-CCACACTTGGGAAACTGGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783231 62 - 123690457 GG--------------------------------------------------GCCCACCGCTGCTTCTGCGGGGCCTTCTC-------AGGAGTAAAAAG-CTACACTTGGGAAACCAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303110 61 - 204787373 GG--------------------------------------------------GCCCAGCGCTGC-TCTGCGCGGCCTTCCC-------CGGAGCAAAACG-CTGCGCTTGGGAAACGGAG i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343707 61 - 16847902 GG--------------------------------------------------GCCCAGCGCTGC-TCTGCGCGGCCTTCCC-------CGGAGCAAAACG-CTGCGCTTGGGAAAGGGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322542 61 + 91754291 GG--------------------------------------------------GCCCAGCGCTGC-TCTGCGCGGCCTTCCC-------AGGAGCAAAACG-CTGCGCTTGGGAAACGGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368274 61 + 1977891 GG--------------------------------------------------GCCCAGCGCTGC-TCTACGCGGCCTTCCT-------CGGAGCAAAACG-CTGCGCTTGGGAAACGGAG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796035 73 + 74750902 GG-------------CCCGGCCC--------------------------CCAGCTCACCGCTACTTCTGCGGGGCCTTCTT-------ATGAGTAAAAAG-CTAAGCTTGGGAAACTTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248754 74 - 17725628 TG-------------CCCTGCCC--------------------------CCAGCTCGCCGCTCCTTCTGCGGGGCCTTCTT-------CTAAGCAAAAAACCTGCACTTGGGAAACTTGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6336386 74 + 6778120 CG-------------CCCACCCC--------------------------GCAGCTCACCGCTACTTCTGCGGGGCCTTCTT-------ATAAGTAAAAAAGCTGCACTTGGGAAACTTGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2134 74 - 21398 CG-------------CCCCGCCC--------------------------CCAGCCCACCGCTACTTCTGCGAGGCCTTCTT-------ATAAGTAAAAAAGCTGCACTTGGGAAACTTGA i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 176757 104 + 608964 GTGTGGATAAGGTGTCTCCATCCTGATGTGAAGA-------GGGCCCAGCCAGCTCCCTGCTGT-GTTCCTGGGCCTTTTT-------AGGAGTAAGAAG-CCATACCTGGGGAATTGGC i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32759539 67 + 98207768 --------------------------------------------------GGGATCCTGGCTGC-TTCACAGATTTTTTTTTTTTAAACTGAGGAAGAAG-CTAAGCTT-AGAAACTTGA i mm10.chr16 I 67 I 1 s canFam3.chr33 2293812 59 - 31377067 --------------------------------------------------AAGCTCTCCACTA--TTTTCAGGGCCTTTTT-------ATGAGGAGAAAG-CTCTATTTGGGAAACTGC- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2669158 104 - 6579706 -------AAGTGTATCATTACCCCAGGAAAAAGAGACCCGGGGGCCCCGTAAGCTCTCTAGTGT-TTTACTCGGACTTTTT-------ATGAGAAAGAAG-CTATACTTGGTAAACTTGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14766877 320 - 22200726 I e micMur3.chr1 88356093 1133 + 114275543 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e colAng1.NW_012118932v1 7322665 927 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M a score=155852.000000 s hg38.chr3_KI270934v1_alt 20818 33 + 163458 -CTGTTCCTGCCGTTTCCACCTTCTGGGATTTGT s panTro5.chr3 200140799 33 + 202621043 -CTGTTCCTGCCGTTTCCACCTTCTGGGATTCGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82919 33 - 190779 -CTGTTCCTGCCGTTTCCACCTTCTGGGATTCGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3044 33 + 55620 -CTGTTCCTGCCCTTTCCACCTTCTGGGATTCGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783293 27 - 123690457 -------CTGCCATTTCCACCTTCTGGGATTAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303171 33 - 204787373 -CTGTTCCCGCCGTGCCCGCGTTCTGGCATTAGT i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343768 25 - 16847902 -CTGTTCCCGCTGTGCCCGCGTTCTG-------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322603 25 + 91754291 -CTGTTCCCGCCCTGCCCGCGTTCTG-------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368335 25 + 1977891 -CTGTTCCCGCCGTGCCCGCGTTCTG-------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323592 33 - 7796314 -CTGTTCCGGCCGCTCCCGCGTTCTGGGGTTAGT i colAng1.NW_012118932v1 I 927 C 0 s calJac3.chr17 73796108 33 + 74750902 -CTGTTCCTGTCGTTTCCATGTTCTGTGATTAGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248828 31 - 17725628 ---ATTCCTGTCGTCCCCATGTTCTGTGATTAGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6336460 33 + 6778120 -CTGTTCCTGTCGTTTCCATGTTCTGTGATTCGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2208 33 - 21398 -CTGTTCCTGTCGTTTCCATGTTCTGTGATTAGT i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 176862 33 + 608964 -TGGTTCATGGTATCTCTATTTTCCACAATGAAC i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32759607 33 + 98207768 -TGGTTCTCGCCATTTCTATTTCCCTGGGTTACT i mm10.chr16 I 1 C 0 s canFam3.chr33 2293871 33 - 31377067 -CTTTTAATGCTGTGTACATTTTCTATGAATGTT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2669262 34 - 6579706 CCATTTCATGCTGTTGATGTTTTTTTGTAATTAT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14766877 320 - 22200726 I e micMur3.chr1 88356093 1133 + 114275543 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e macFas5.chr2 192362332 14732 - 192460366 M a score=519624.000000 s hg38.chr3_KI270934v1_alt 20851 62 + 163458 -CTCTGGCCCCCTGGTC---------CCTGCCTCCTGGAGCAGAGTTGGAGGGACAGTCCTGGCTCCTGTGG s panTro5.chr3 200140832 62 + 202621043 -CTCTGGCCCCCTGGTC---------CCTGCCTCCTGGAGCAGAGTTGGAGGGACAGTCCTGGCTCCTGTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82952 62 - 190779 -CTCTGGCCCCCTGGTC---------CCTGCCTCCTGGAGCAGAGTTGGAGGGACAGTCCTGGCTCCTGTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3077 62 + 55620 -CTCTGGCCCCCTGGTC---------CCTGCCTCCTGGAGCAGAGTTGGAGGGACAATCCTGGCTCCTGTGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783320 62 - 123690457 -CTCTGGCCCGCTGGTC---------CCTGTCTCCTGGAGCGGAGTTGGAAGGACAGTCCTGGCTCCTGTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303204 61 - 204787373 -CTCTGGCCCCCCGGTC---------CCTGTCCCCTGGA-CGGAGTTGGAGGGGCCGTCCTGGCTCCCGCGG i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343793 55 - 16847902 --------CACCCCGTC---------CCTGTCCCCTGGAGCGGAGTTGGAGGGGCCGTCCTGGCTCCCGCGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322628 56 + 91754291 ------GCCCCCTGGTC---------CTTGTCCCCTGGA-CGAAGTTGGAGGGGCCGTCCTGGCTCCCGCGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368360 57 + 1977891 ------GCCACCCCGTC---------CCTGTCCCCTGGAGCGGAGTTGGAGGGGCCGTCCTGGCTCCCGCGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323625 59 - 7796314 -CTCCGG---CCCGGTC---------CCTGAATCCTGGAGCGGAGCTGGAGGGGCCGTCCTGGCTCCCGCGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796141 60 + 74750902 -CTCTGGCCCCCGGGTC---------TCTGTCTCCTGGAGC--AGTTGGAAGGGCAGTCCTGGCTCCTGCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248859 62 - 17725628 -CTCTGGCCCCTGGGTC---------CCTGTCTCCTGGAGCAGAGTTGGAAGGGCAGTCCTGGCTCCTTCAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6336493 62 + 6778120 -CTCTGGCCCCCCGGTC---------CCTGTCTCCTGGAGCAGAGTTGGAAGGGCAGTCCTGGCTCCTGCAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2241 62 - 21398 -CTCTGGCCCCTGGGTC---------CCTGTCTCCTGGAGCAGAGCTGGAAGGGCAGTCCTGGCTCCTGCAC i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 14767197 62 - 22200726 -CTCTGGTCCCCTGGTC---------CATGTCCCCTGGGGCAGAGTGGGAAGGGCCGTCCTGGCCCCTGTGG i proCoq1.NW_012133858v1 I 320 I 366 s otoGar3.GL873829 176895 63 + 608964 -CTCTGG-CTTCTGGTCTG-------CGTGTCTCCTGGAGCAGAGTTGGAAGGGTGGCCCTGGGCTCTGTTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32759640 38 + 98207768 ---------------TC---------CTGATTCCCTG----------GGAACAGCAAACCTGGCTTTTCTTG i mm10.chr16 C 0 C 0 s canFam3.chr33 2293904 70 - 31377067 -TCCTGGTTCCTCAGGCCAAGTA-GCCGCGTCTCCTGGAGGAGAGTTGGAATGGCAGCCATGGCCCCTGCAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2669296 72 - 6579706 TTCCTGGTTTCCTGGTCCAAGTACTCCATGTCTCCTTGAGTAGGGTTGGAGTGACAATCCTGGCCCCTGAGG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88356093 1133 + 114275543 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e macFas5.chr2 192362332 14732 - 192460366 M a score=116457.000000 s hg38.chr3_KI270934v1_alt 20913 20 + 163458 CCCTGAGGG-------A-GGAGGCTGAG s panTro5.chr3 200140894 20 + 202621043 CCCTGAGGG-------A-GGAGGTTGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83014 20 - 190779 CCCTGAGGG-------A-GGAGGCTGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3139 20 + 55620 CCCCGAGGG-------A-GGAGGCTGAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783382 20 - 123690457 CCCTCAGGG-------A-GGAGGCTGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303265 19 - 204787373 CCCTCAGGG---------GGAGGCTGTG i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343848 19 - 16847902 CCCTCAGGG---------GGAGGCTGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322684 19 + 91754291 CCCTCAGGG---------GGAGGCTGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368417 19 + 1977891 CCCTCAGGG---------GGAGGCTGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323684 20 - 7796314 CCCTCAGGG-------A-GGAGGCTGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796201 20 + 74750902 CCCACAGGG-------A-GGAGGCTGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248921 12 - 17725628 CT--CTGAG-------A-GGAG------ i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6336555 20 + 6778120 CCCTCAGGG-------A-GGAGGCTGAG i cebCap1.NW_016107444v1 C 0 I 361 s aotNan1.NW_018492867v1 2303 20 - 21398 CCCTCAGGG-------A-GGGGGCTGAG i aotNan1.NW_018492867v1 C 0 I 107 s otoGar3.GL873829 176958 19 + 608964 CCCACAAGA---------AGGGGCTCAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32759678 16 + 98207768 CCCTCAGGGAC-----A-GGAG------ i mm10.chr16 C 0 C 0 s canFam3.chr33 2293974 27 - 31377067 CCCTCAGGGGCGGGGTG-GCGGGCTGAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2669368 21 - 6579706 CTCTCAGCC-------AGGGAGGCTTGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e micMur3.chr1 88356093 1133 + 114275543 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e macFas5.chr2 192362332 14732 - 192460366 M a score=46845.000000 s hg38.chr3_KI270934v1_alt 20933 11 + 163458 TCCGAACACAG s panTro5.chr3 200140914 11 + 202621043 TCCGAACACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83034 11 - 190779 TCCGAACACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3159 11 + 55620 TCCGAACACAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783402 11 - 123690457 TTGGAACACAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303284 8 - 204787373 ---GGACGCAC i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343867 8 - 16847902 ---GGACGCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322703 8 + 91754291 ---GGACGCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368436 8 + 1977891 ---GGACGCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323704 8 - 7796314 ---GGACACAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796221 10 + 74750902 -AGGAATACAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248933 9 - 17725628 --TGAATACAC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 176977 11 + 608964 TTAGGACACAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32759694 11 + 98207768 TAGGGACACCC i mm10.chr16 C 0 C 0 s canFam3.chr33 2294001 11 - 31377067 GCAGGACACCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2669389 11 - 6579706 TCAGGACACAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e macNem1.NW_012014355v1 19106345 5320 - 19675229 M e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e macFas5.chr2 192362332 14732 - 192460366 M a score=133801.000000 s hg38.chr3_KI270934v1_alt 20944 17 + 163458 CATGAGAGGGCGACTGA s panTro5.chr3 200140925 17 + 202621043 CATGAGAGGGCGACTGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83045 17 - 190779 CATGAGAGGGCGACTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3170 17 + 55620 CATGAGAGGGCGACTGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783413 17 - 123690457 CATGAGAGGGCGACTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303292 17 - 204787373 CATGTGAGGGCGACTCA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111667 17 - 19675229 CATGAGAGGGCGACTCA i macNem1.NW_012014355v1 M 5320 C 0 s cerAty1.NW_012004056v1 16343875 17 - 16847902 CATGAGAGGGCGACTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322711 17 + 91754291 CATGAGAGGGCGACTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368444 17 + 1977891 CATGAGAGGGCGACTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323712 17 - 7796314 CATGAGAGGGCGACTCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796231 17 + 74750902 CATCAGAGGGCGACTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248942 17 - 17725628 CATCAGAGGGTGACTCA i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 176988 17 + 608964 TCTGAGAAGGCAGCACA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32759705 17 + 98207768 AATGAGAGCTCAGCACA i mm10.chr16 C 0 C 0 s canFam3.chr33 2294012 17 - 31377067 TAAGGTAGGGCAACACC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2669400 17 - 6579706 TATGAGAAGCCTAAACA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e macFas5.chr2 192362332 14732 - 192460366 M a score=49198.000000 s hg38.chr3_KI270934v1_alt 20961 6 + 163458 GCGATG s panTro5.chr3 200140942 6 + 202621043 GCGATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83062 6 - 190779 GCGATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3187 6 + 55620 GCGATG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783430 6 - 123690457 GCGATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303309 6 - 204787373 GCAATG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111684 6 - 19675229 GCAATG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16343892 6 - 16847902 GCAATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322728 6 + 91754291 GCAATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368461 6 + 1977891 GCAATG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323729 6 - 7796314 GCAATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796248 6 + 74750902 ATGATG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248959 6 - 17725628 GCGATG i saiBol1.JH378146 C 0 C 0 s mm10.chr16 32759722 6 + 98207768 GTAAGG i mm10.chr16 C 0 C 0 s canFam3.chr33 2294029 6 - 31377067 GTGATG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2669417 6 - 6579706 GCAGTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M a score=6908.000000 s hg38.chr3_KI270934v1_alt 20967 2 + 163458 GA s panTro5.chr3 200140948 2 + 202621043 GA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83068 2 - 190779 GA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3193 2 + 55620 GG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303315 2 - 204787373 GT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111690 2 - 19675229 GT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16343898 2 - 16847902 GT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322734 2 + 91754291 GT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368467 2 + 1977891 GT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323735 2 - 7796314 GT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796254 2 + 74750902 GA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248965 2 - 17725628 GA i saiBol1.JH378146 C 0 C 0 s mm10.chr16 32759728 2 + 98207768 GA i mm10.chr16 C 0 C 0 s canFam3.chr33 2294035 2 - 31377067 GG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2669423 2 - 6579706 GA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=6175.000000 s hg38.chr3_KI270934v1_alt 20969 1 + 163458 G s panTro5.chr3 200140950 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83070 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3195 1 + 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303317 1 - 204787373 G i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111692 1 - 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16343900 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322736 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368469 1 + 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323737 1 - 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796256 1 + 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248967 1 - 17725628 G i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 2294037 1 - 31377067 G i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 2669425 1 - 6579706 G i dasNov3.JH569502 C 0 I 9 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=6006.000000 s hg38.chr3_KI270934v1_alt 20970 1 + 163458 A s panTro5.chr3 200140951 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83071 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3196 1 + 55620 A i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303318 1 - 204787373 A i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111693 1 - 19675229 A i macNem1.NW_012014355v1 C 0 I 2 s cerAty1.NW_012004056v1 16343901 1 - 16847902 A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322737 1 + 91754291 A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368470 1 + 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323738 1 - 7796314 A i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796257 1 + 74750902 A i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248968 1 - 17725628 A i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=1500.000000 s hg38.chr3_KI270934v1_alt 20971 1 + 163458 G s panTro5.chr3 200140952 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83072 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3197 1 + 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 s calJac3.chr17 73796258 1 + 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248969 1 - 17725628 G i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111694 2 - 19675229 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323739 0 - 7796314 C e manLeu1.NW_012102020v1 1368471 0 + 1977891 C e chlSab2.chr15 91322738 0 + 91754291 C e cerAty1.NW_012004056v1 16343902 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303319 0 - 204787373 C e nomLeu3.chr11 2783436 0 - 123690457 C a score=8633.000000 s hg38.chr3_KI270934v1_alt 20972 2 + 163458 GG s panTro5.chr3 200140953 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83073 2 - 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3198 2 + 55620 GG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303319 2 - 204787373 GG i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343902 2 - 16847902 GG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322738 2 + 91754291 GG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368471 2 + 1977891 GG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323739 2 - 7796314 GG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796259 2 + 74750902 AG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248970 2 - 17725628 AG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111694 2 - 19675229 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=85621.000000 s hg38.chr3_KI270934v1_alt 20974 22 + 163458 TGTCCACACC-------TGCTGAGCGATA s panTro5.chr3 200140955 22 + 202621043 TGTCCACACC-------TGCTGAGCGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83075 22 - 190779 TGTCCACACC-------TGCTGAGCGATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3200 22 + 55620 TGTCCACACC-------TGCTGAGCGATA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303321 22 - 204787373 TGTCTACACC-------TGCTGAGCCGTG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111696 22 - 19675229 TGTCTACACC-------TGCTGAGCCATG i macNem1.NW_012014355v1 I 2 I 10 s cerAty1.NW_012004056v1 16343904 22 - 16847902 TGTCTACACT-------TGCTGAGCCATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322740 22 + 91754291 TGTCTACACC-------TGCTGAGCCATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368473 22 + 1977891 TGTCTACACC-------TGCTGAGCCATG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323741 22 - 7796314 TGTCTACACC-------TGCTGAGCCATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796261 28 + 74750902 -GGCTGCACCCCCCACGCCCCGAGGGATG i calJac3.chr17 C 0 I 7 s saiBol1.JH378146 17248972 23 - 17725628 -GGCTGCACCCC-----CACCAAGGGATG i saiBol1.JH378146 C 0 I 45 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=21290.000000 s hg38.chr3_KI270934v1_alt 20996 6 + 163458 GAGAGA s panTro5.chr3 200140977 6 + 202621043 GACAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83097 6 - 190779 GACAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3222 6 + 55620 GAGAGA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303343 6 - 204787373 GAGAGA i rheMac8.chr2 C 0 I 25 s cerAty1.NW_012004056v1 16343926 6 - 16847902 GAGAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322762 6 + 91754291 GAAAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368495 6 + 1977891 GAGAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323763 6 - 7796314 GAGAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796296 6 + 74750902 GAGAGA i calJac3.chr17 I 7 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111718 10 - 19675229 I e saiBol1.JH378146 17248995 45 - 17725628 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=-1260.000000 s hg38.chr3_KI270934v1_alt 21002 1 + 163458 -G s panTro5.chr3 200140983 1 + 202621043 -G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83103 1 - 190779 -G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3228 1 + 55620 -G i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303374 1 - 204787373 -G i rheMac8.chr2 I 25 C 0 s colAng1.NW_012118932v1 7323769 1 - 7796314 -G i colAng1.NW_012118932v1 C 0 I 12 s calJac3.chr17 73796302 1 + 74750902 C- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111718 10 - 19675229 I e saiBol1.JH378146 17248995 45 - 17725628 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368501 0 + 1977891 C e chlSab2.chr15 91322768 0 + 91754291 C e cerAty1.NW_012004056v1 16343932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=2552.000000 s hg38.chr3_KI270934v1_alt 21003 1 + 163458 G s panTro5.chr3 200140984 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83104 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3229 1 + 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303375 1 - 204787373 G i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343932 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322768 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368501 1 + 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796303 1 + 74750902 A i calJac3.chr17 C 0 I 27 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111718 10 - 19675229 I e saiBol1.JH378146 17248995 45 - 17725628 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=-362.000000 s hg38.chr3_KI270934v1_alt 21004 3 + 163458 GTG s panTro5.chr3 200140985 3 + 202621043 GTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83105 3 - 190779 GTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3230 3 + 55620 GTG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303376 3 - 204787373 GTG i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16343933 3 - 16847902 ATT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322769 3 + 91754291 ATT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368502 3 + 1977891 ATT i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796331 2 + 74750902 GC- i calJac3.chr17 I 27 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111718 10 - 19675229 I e saiBol1.JH378146 17248995 45 - 17725628 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=1684.000000 s hg38.chr3_KI270934v1_alt 21007 11 + 163458 TCCA--CACCTGC- s panTro5.chr3 200140988 11 + 202621043 TCCA--CACCTGA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83108 11 - 190779 TCCA--CACCTGA- i panPan2.chrUn_NW_014024201v1 C 0 T 60 s gorGor5.CYUI01001831v1 3233 11 + 55620 TCCA--CACCTGC- i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303379 10 - 204787373 TCTACACCCC---- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111728 6 - 19675229 TCCA----CC---- i macNem1.NW_012014355v1 I 10 C 0 s cerAty1.NW_012004056v1 16343936 8 - 16847902 TCCA--CCCC---- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322772 6 + 91754291 TCCA----CC---- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368505 8 + 1977891 TCCA--CCCC---- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796333 9 + 74750902 TCCA--CCCC---C i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17248995 45 - 17725628 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=61747.000000 s hg38.chr3_KI270934v1_alt 21018 20 + 163458 TGAGCGATGGCGAGAGGGTG s panTro5.chr3 200140999 20 + 202621043 TGAGCAATGGAGAGAGGGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83059 18 - 190779 TGAGCGATG--GAGAGGGTG i panPan2.chrUn_NW_014024201v1 T 60 C 0 s gorGor5.CYUI01001831v1 3244 20 + 55620 TGAGCGATAGAGAGAGGGTG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303389 20 - 204787373 CGAGGGATGGAGAGAGGGTG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111734 20 - 19675229 CGAGCGATGGAGAGAGGGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16343944 20 - 16847902 CGAGCGATGGAGAGAGGGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322778 20 + 91754291 CGAGCGATGGAGAGAGGGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368513 20 + 1977891 CGAGCGATGGAGAGAGGGTG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796342 17 + 74750902 TGAGTGATAGAGAGAGA--- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17248995 45 - 17725628 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=33195.000000 s hg38.chr3_KI270934v1_alt 21038 9 + 163458 TCCACACCT s panTro5.chr3 200141019 9 + 202621043 TCTACACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83077 9 - 190779 TCCACACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3264 9 + 55620 TCCACACCT i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303409 9 - 204787373 TCTACACCC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111754 9 - 19675229 TCTACAGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16343964 9 - 16847902 TCCACACCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322798 9 + 91754291 TCTACACCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368533 9 + 1977891 TCTACACCC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796359 9 + 74750902 TCTCCACCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249040 9 - 17725628 TCTCTACCC i saiBol1.JH378146 I 45 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=4615.000000 s hg38.chr3_KI270934v1_alt 21047 3 + 163458 GCT s panTro5.chr3 200141028 3 + 202621043 GCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83086 3 - 190779 GCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3273 3 + 55620 GCT i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303418 2 - 204787373 -CT i rheMac8.chr2 C 0 T 60 s cerAty1.NW_012004056v1 16343973 2 - 16847902 -CC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322807 2 + 91754291 -CT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368542 2 + 1977891 -CC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796368 3 + 74750902 ACT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249049 3 - 17725628 CTT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111763 0 - 19675229 C e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=21888.000000 s hg38.chr3_KI270934v1_alt 21050 8 + 163458 GAGCGATG s panTro5.chr3 200141031 8 + 202621043 GAGCAATA i panTro5.chr3 C 0 T 90 s panPan2.chrUn_NW_014024201v1 83089 8 - 190779 GAGCGATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3276 8 + 55620 GAGCGATA i gorGor5.CYUI01001831v1 C 0 C 0 s cerAty1.NW_012004056v1 16343975 8 - 16847902 GAGCGATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322809 8 + 91754291 GAGCGATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368544 8 + 1977891 GAGCGATG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796371 8 + 74750902 GAGCAATG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249052 8 - 17725628 GAGAGATG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111763 0 - 19675229 C e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303420 60 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C a score=3586.000000 s hg38.chr3_KI270934v1_alt 21058 3 + 163458 GCG s panPan2.chrUn_NW_014024201v1 83097 3 - 190779 GAC i panPan2.chrUn_NW_014024201v1 C 0 T 31 s gorGor5.CYUI01001831v1 3284 3 + 55620 GAG i gorGor5.CYUI01001831v1 C 0 C 0 s cerAty1.NW_012004056v1 16343983 3 - 16847902 GAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322817 1 + 91754291 --G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368552 3 + 1977891 GAG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796379 3 + 74750902 GAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249060 3 - 17725628 GAG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111763 0 - 19675229 C e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303420 60 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C e panTro5.chr3 200141039 90 + 202621043 T a score=9579.000000 s hg38.chr3_KI270934v1_alt 21061 12 + 163458 AGAGGGTGTCCA s panPan2.chrUn_NW_014024201v1 83069 12 - 190779 AGAGGGTGTCCA i panPan2.chrUn_NW_014024201v1 T 31 C 0 s gorGor5.CYUI01001831v1 3287 12 + 55620 AGAGGGTGTCCA i gorGor5.CYUI01001831v1 C 0 C 0 s cerAty1.NW_012004056v1 16343986 12 - 16847902 AGAGGGTGTCTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322818 12 + 91754291 AGAGGGTGTCTA i chlSab2.chr15 C 0 I 36 s manLeu1.NW_012102020v1 1368555 12 + 1977891 AGAGGGTGTCTA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796382 10 + 74750902 AGAGACACTC-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249063 9 - 17725628 AGACAT-CTC-- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111763 0 - 19675229 C e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303420 60 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C e panTro5.chr3 200141039 90 + 202621043 T a score=2614.000000 s hg38.chr3_KI270934v1_alt 21073 6 + 163458 CACCTG s panPan2.chrUn_NW_014024201v1 83081 6 - 190779 CACCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3299 6 + 55620 CACCTG i gorGor5.CYUI01001831v1 C 0 C 0 s cerAty1.NW_012004056v1 16343998 5 - 16847902 CACCC- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1368567 5 + 1977891 CAGCC- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796392 6 + 74750902 CACCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249072 6 - 17725628 CACCCT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111763 0 - 19675229 C e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e chlSab2.chr15 91322830 36 + 91754291 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303420 60 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C e panTro5.chr3 200141039 90 + 202621043 T a score=5348.000000 s hg38.chr3_KI270934v1_alt 21079 2 + 163458 CT s panPan2.chrUn_NW_014024201v1 83087 2 - 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3305 2 + 55620 CT i gorGor5.CYUI01001831v1 C 0 C 0 s macNem1.NW_012014355v1 19111763 2 - 19675229 CT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344003 2 - 16847902 CT i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1368572 2 + 1977891 CT i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796398 2 + 74750902 CT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249078 2 - 17725628 CT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e chlSab2.chr15 91322830 36 + 91754291 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303420 60 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C e panTro5.chr3 200141039 90 + 202621043 T a score=29299.000000 s hg38.chr3_KI270934v1_alt 21081 11 + 163458 GAGCGATGGCG s panPan2.chrUn_NW_014024201v1 83089 11 - 190779 GAGCGATAGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3307 11 + 55620 GAGCGATAGAG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303360 11 - 204787373 GAGCGATGGAG i rheMac8.chr2 T 60 C 0 s macNem1.NW_012014355v1 19111765 11 - 19675229 GAGCGATGGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344005 11 - 16847902 GAGTGATGGAG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1368574 11 + 1977891 GAGTAATGGAG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796400 11 + 74750902 GAGTGATGGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249080 11 - 17725628 GAGTGATGGAG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e chlSab2.chr15 91322830 36 + 91754291 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C e panTro5.chr3 200141039 90 + 202621043 T a score=31550.000000 s hg38.chr3_KI270934v1_alt 21092 18 + 163458 AGAGGGTGTCCACACCTG s panTro5.chr3 200140949 18 + 202621043 AGAGGGTGTCCACACCTG i panTro5.chr3 T 90 C 0 s panPan2.chrUn_NW_014024201v1 83100 18 - 190779 AGAGGGTGTCCACACCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3318 18 + 55620 AGAGGGTGTCCACACCTG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303371 18 - 204787373 AGAGGGTGTCTACACCCC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111776 18 - 19675229 AGAGGGTGTCTACAGCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344016 18 - 16847902 AGAGGGTGTCTACACCCC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1368585 17 + 1977891 AGAGGGTGTCTACACCC- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796411 16 + 74750902 AGAGACACTCCACCCC-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249091 3 - 17725628 AGA--------------- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e chlSab2.chr15 91322830 36 + 91754291 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=2338.000000 s hg38.chr3_KI270934v1_alt 21110 2 + 163458 CT s panTro5.chr3 200140967 2 + 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83118 2 - 190779 AT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3336 2 + 55620 CT i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303389 1 - 204787373 -C i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111794 1 - 19675229 -T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344034 1 - 16847902 -T i cerAty1.NW_012004056v1 C 0 T 90 s chlSab2.chr15 91322866 2 + 91754291 CT i chlSab2.chr15 I 36 C 0 s manLeu1.NW_012102020v1 1368602 2 + 1977891 CC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796427 2 + 74750902 CT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249094 0 - 17725628 C e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=161481.000000 s hg38.chr3_KI270934v1_alt 21112 59 + 163458 GAGCGATAGAGAGAGGGTGTCCACA-CCTGCTGAGCGATGGCGAGAGG-GTGTCCACACCT s panTro5.chr3 200140969 59 + 202621043 GAGCGATAGACAGAGGGTGTCCACA-CCTGATGAGCAATGGAGAGAGG-GTGTCTACACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83120 56 - 190779 GAGCAATGGAGAGAGGGTGTCTACA-CCTGCTGAGCAATAGAGAGAG----GTTTCCACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3338 59 + 55620 GAGCGATAGAGAGAGGGTGTCCACA-CCTGCTGAGCGATAGAGAGAGG-GTGTCCACACCT i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303390 58 - 204787373 GAGGGATGGAGAGAGGGTGTCTACA-CCC-CTGAGCGATGGAGAGAGG-GTGTCTACACCC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111795 58 - 19675229 GAGCGATGGAGAGAGGGTGTCTACA-GCC-CTGAGCGATGGAGAGAGG-GTGTCTACAGCC i macNem1.NW_012014355v1 C 0 T 90 s cerAty1.NW_012004056v1 16343945 58 - 16847902 GAGCGATGGAGAGAGGGTGTCCACA-CCC-CCGAGCGATGGAGAGAGG-GTGTCTACACCC i cerAty1.NW_012004056v1 T 90 C 0 s chlSab2.chr15 91322868 57 + 91754291 GAGTGATG--GAGAGGGTGTCTACACCCC-CTGAGTTATGGAGAGAGG-GTGTCTACACCC i chlSab2.chr15 C 0 I 1 s manLeu1.NW_012102020v1 1368604 58 + 1977891 GAGGGATGGAGAGAGGGTGTCTACA-CCC-TTGAGTGATGGAGAGAGG-GTGTCTACACCC i manLeu1.NW_012102020v1 C 0 I 1 s calJac3.chr17 73796429 54 + 74750902 GAGTGATGGAGAGAG---ATCTCCA-CCCCCTGAGTGATGGAGAGAG--AGCTCCACACC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249094 48 - 17725628 --------GAAAGAG---ATCTCCA-CCCTCTGAGCGATGGCGAGAGACATCTCCACCCC- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=600.000000 s hg38.chr3_KI270934v1_alt 21171 1 + 163458 G s panTro5.chr3 200141028 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83176 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3397 1 + 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111853 90 - 19675229 T e saiBol1.JH378146 17249142 0 - 17725628 C e calJac3.chr17 73796483 0 + 74750902 C e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e manLeu1.NW_012102020v1 1368662 1 + 1977891 I e chlSab2.chr15 91322925 1 + 91754291 I e cerAty1.NW_012004056v1 16344003 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303448 0 - 204787373 C e nomLeu3.chr11 2783436 0 - 123690457 C a score=6845.000000 s hg38.chr3_KI270934v1_alt 21172 2 + 163458 CT s panTro5.chr3 200141029 2 + 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83177 2 - 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3398 2 + 55620 CT i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303448 2 - 204787373 CC i rheMac8.chr2 C 0 T 90 s macNem1.NW_012014355v1 19111763 2 - 19675229 CT i macNem1.NW_012014355v1 T 90 C 0 s cerAty1.NW_012004056v1 16344003 2 - 16847902 CT i cerAty1.NW_012004056v1 C 0 T 60 s chlSab2.chr15 91322926 1 + 91754291 -T i chlSab2.chr15 I 1 T 148 s manLeu1.NW_012102020v1 1368663 1 + 1977891 -T i manLeu1.NW_012102020v1 I 1 T 150 s calJac3.chr17 73796483 2 + 74750902 CT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249142 2 - 17725628 CT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=49525.000000 s hg38.chr3_KI270934v1_alt 21174 20 + 163458 GAGCGATAGAGAGAGGGTGT s panTro5.chr3 200141031 19 + 202621043 GAGCAATAGAGAGAGGTT-T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83179 20 - 190779 AAGAGATGGAGATGGGGTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3400 20 + 55620 GAGCGATAGAGAGAGGGTTT i gorGor5.CYUI01001831v1 C 0 C 0 s macNem1.NW_012014355v1 19111765 20 - 19675229 GAGCGATGGAGAGAGGGTGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16343945 20 - 16847902 GAGCGATGGAGAGAGGGTGT i cerAty1.NW_012004056v1 T 60 C 0 s chlSab2.chr15 91322779 20 + 91754291 GAGCGATGGAGAGAGGGTGT i chlSab2.chr15 T 148 C 0 s manLeu1.NW_012102020v1 1368514 20 + 1977891 GAGCGATGGAGAGAGGGTGT i manLeu1.NW_012102020v1 T 150 C 0 s calJac3.chr17 73796485 17 + 74750902 GAGTGATGGAGAGAGAT--- i calJac3.chr17 C 0 T 198 s saiBol1.JH378146 17249144 17 - 17725628 GAGCAGTGGAGAGAGGT--- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303450 90 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C a score=-3296.000000 s hg38.chr3_KI270934v1_alt 21194 11 + 163458 --CCACACCTGCT s panTro5.chr3 200141050 9 + 202621043 --CCAC--CTGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83199 4 - 190779 --CTGC------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3420 11 + 55620 --CCACACCTGCT i gorGor5.CYUI01001831v1 C 0 C 0 s macNem1.NW_012014355v1 19111785 10 - 19675229 --CTACAGCCCT- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16343965 10 - 16847902 --CCACACCCCC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322799 10 + 91754291 --CTACACCCCT- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368534 10 + 1977891 --CTACACCCCC- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796304 11 + 74750902 CTCCACCCCCT-- i calJac3.chr17 T 198 C 0 s saiBol1.JH378146 17249161 11 - 17725628 CTCCACCCCAT-- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303450 90 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C a score=33394.000000 s hg38.chr3_KI270934v1_alt 21205 14 + 163458 GAG------------------------------CGATGGAGAGA s panTro5.chr3 200141059 44 + 202621043 AAGAGATGGAGATGGGGTGTCTGCACCCCTGATCGATGGAGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83203 20 - 190779 ------------------------ACCCCTGATCGATGGAGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3431 14 + 55620 GAG------------------------------CGATGGAGAGA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303360 14 - 204787373 ------------------------------GAGCGATGGAGAGA i rheMac8.chr2 T 90 I 30 s macNem1.NW_012014355v1 19111795 14 - 19675229 ------------------------------GAGCGATGGAGAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16343975 14 - 16847902 ------------------------------GAGCGATGGAGAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322809 12 + 91754291 ------------------------------GAGCGATG--GAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368544 14 + 1977891 ------------------------------GAGCGATGGAGAGA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796315 14 + 74750902 ------------------------------GAGTGATGGGGAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249172 14 - 17725628 ------------------------------GAGTGATGGAGAGA i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=12695.000000 s hg38.chr3_KI270934v1_alt 21219 5 + 163458 GGGTG s panTro5.chr3 200141103 5 + 202621043 GGGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83223 5 - 190779 GGGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3445 5 + 55620 GGGTG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303404 5 - 204787373 GGGTG i rheMac8.chr2 I 30 C 0 s macNem1.NW_012014355v1 19111809 5 - 19675229 GGGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16343989 5 - 16847902 GGGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322821 5 + 91754291 GGGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368558 5 + 1977891 GGGTG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796329 4 + 74750902 GAGC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249186 4 - 17725628 GGTT- i saiBol1.JH378146 C 0 T 215 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=107308.000000 s hg38.chr3_KI270934v1_alt 21224 43 + 163458 TCCACA-CCTGC---------TGAGTGATAGAGAGAGGGTGTCCACACCTGCT- s panTro5.chr3 200141108 41 + 202621043 TCTGCA-CCCG----------TGAGCGATAGAGAGAGGGTGTCTACACCT-CT- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83228 41 - 190779 TCTGCA-CCCG----------TGAGCGATAGAGAGAGGGTGTCTACACCT-CT- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3450 43 + 55620 TCCACA-CCTGC---------TGAGCGATAGACAGAGGGTGTCCACACCTGCT- i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303409 41 - 204787373 TCTACA-CCCC----------TGAGCGATGGAGAGAGGGTGTCTACACCC-CC- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111814 41 - 19675229 TCTACA-GCCC----------TGAGCGATGGAGAGAGGGTGTCTACAGCC-CT- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16343994 41 - 16847902 TCTACA-CCCC----------TGAGTGATGGAGAGAGGGTGTCTACACCC-CT- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322826 42 + 91754291 TCTACACCCCC----------TGAGTTATGGAGAGAGGGTGTCTACACCC-CT- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368563 41 + 1977891 TCTACA-GCCC----------TGAGTAATGGAGAGAGGGTGTCTACACCC-CC- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796333 38 + 74750902 --TCCA-CCCCC---------TGAGTGATAGAGAGAG---ATCTCCACCC-ACT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248975 47 - 17725628 --TGCA-CCCCCACCAAGGGATGAGTCATAGAGAGAG---CTCTCCACCC-CCT i saiBol1.JH378146 T 215 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323770 12 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=88799.000000 s hg38.chr3_KI270934v1_alt 21267 23 + 163458 GAGCGATGGAGAGAGGGTGTCCA s panTro5.chr3 200141149 23 + 202621043 GAGCGATGGAGAGAGGGTGTCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83269 23 - 190779 GAGCGATGGAGAGAGGGTGTCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3493 23 + 55620 GAGCGATAGACAGAGGGTGTCCA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303450 23 - 204787373 GAGCGATGGAGAGAGGGTGTCCA i rheMac8.chr2 C 0 T 99 s macNem1.NW_012014355v1 19111855 23 - 19675229 GAGGGATGGAGAGAGGGTGTCTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344035 23 - 16847902 GAGTTATGGAGAGAGGGTGTCTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322868 21 + 91754291 GAGTGATG--GAGAGGGTGTCTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368604 23 + 1977891 GAGGGATGGAGAGAGGGTGTCTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323782 23 - 7796314 GAGCGATGGAGAGAGGGTGTCTA i colAng1.NW_012118932v1 I 12 C 0 s calJac3.chr17 73796371 16 + 74750902 GAGCAATGGAGAGAGA------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249022 22 - 17725628 GAGCAAAGGAGACAGAGTTCTC- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=9195.000000 s hg38.chr3_KI270934v1_alt 21290 2 + 163458 CA s panTro5.chr3 200141172 2 + 202621043 CA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83292 2 - 190779 CA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3516 2 + 55620 CA i gorGor5.CYUI01001831v1 C 0 C 0 s macNem1.NW_012014355v1 19111878 2 - 19675229 CA i macNem1.NW_012014355v1 C 0 T 162 s cerAty1.NW_012004056v1 16344058 2 - 16847902 CA i cerAty1.NW_012004056v1 C 0 I 13 s chlSab2.chr15 91322889 2 + 91754291 CA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368627 2 + 1977891 CA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323805 2 - 7796314 CA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796387 2 + 74750902 CA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249044 2 - 17725628 TA i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303473 99 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C a score=2100.000000 s hg38.chr3_KI270934v1_alt 21292 1 + 163458 C s panTro5.chr3 200141174 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83294 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3518 1 + 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s colAng1.NW_012118932v1 7323807 1 - 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796389 1 + 74750902 C i calJac3.chr17 C 0 T 86 s saiBol1.JH378146 17249046 1 - 17725628 C i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111880 162 - 19675229 T e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368629 0 + 1977891 C e chlSab2.chr15 91322891 0 + 91754291 C e cerAty1.NW_012004056v1 16344060 13 - 16847902 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303473 99 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C a score=1500.000000 s hg38.chr3_KI270934v1_alt 21293 1 + 163458 C s panTro5.chr3 200141175 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83295 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3519 1 + 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s colAng1.NW_012118932v1 7323808 1 - 7796314 C i colAng1.NW_012118932v1 C 0 I 7 s saiBol1.JH378146 17249047 1 - 17725628 C i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111880 162 - 19675229 T e calJac3.chr17 73796390 86 + 74750902 T e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368629 0 + 1977891 C e chlSab2.chr15 91322891 0 + 91754291 C e cerAty1.NW_012004056v1 16344060 13 - 16847902 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303473 99 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C a score=4560.000000 s hg38.chr3_KI270934v1_alt 21294 8 + 163458 TGCTGAGT s panTro5.chr3 200141176 8 + 202621043 TGCTGAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83296 8 - 190779 TGCTGAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3520 8 + 55620 TGCTGAGC i gorGor5.CYUI01001831v1 C 0 C 0 s saiBol1.JH378146 17249048 8 - 17725628 CCTTGAGA i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111880 162 - 19675229 T e calJac3.chr17 73796390 86 + 74750902 T e cebCap1.NW_016107444v1 6336575 361 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323809 7 - 7796314 I e manLeu1.NW_012102020v1 1368629 0 + 1977891 C e chlSab2.chr15 91322891 0 + 91754291 C e cerAty1.NW_012004056v1 16344060 13 - 16847902 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303473 99 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C a score=2865.000000 s hg38.chr3_KI270934v1_alt 21302 2 + 163458 GA s panTro5.chr3 200141184 2 + 202621043 GA i panTro5.chr3 C 0 T 147 s panPan2.chrUn_NW_014024201v1 83304 2 - 190779 GA i panPan2.chrUn_NW_014024201v1 C 0 I 2 s gorGor5.CYUI01001831v1 3528 2 + 55620 GA i gorGor5.CYUI01001831v1 C 0 I 95 s saiBol1.JH378146 17249056 2 - 17725628 GA i saiBol1.JH378146 C 0 T 56 s cebCap1.NW_016107444v1 6336936 2 + 6778120 GA i cebCap1.NW_016107444v1 I 361 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111880 162 - 19675229 T e calJac3.chr17 73796390 86 + 74750902 T e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323809 7 - 7796314 I e manLeu1.NW_012102020v1 1368629 0 + 1977891 C e chlSab2.chr15 91322891 0 + 91754291 C e cerAty1.NW_012004056v1 16344060 13 - 16847902 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303473 99 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C a score=11835.000000 s hg38.chr3_KI270934v1_alt 21304 9 + 163458 GAGAGAGGT s panTro5.chr3 200141039 9 + 202621043 GAGAGAGGT i panTro5.chr3 T 147 C 0 s panPan2.chrUn_NW_014024201v1 83308 9 - 190779 GAGAGAGGT i panPan2.chrUn_NW_014024201v1 I 2 C 0 s gorGor5.CYUI01001831v1 3625 9 + 55620 GAGAGAGGT i gorGor5.CYUI01001831v1 I 95 C 0 s saiBol1.JH378146 17249002 9 - 17725628 GAGAGAGCT i saiBol1.JH378146 T 56 C 0 s cebCap1.NW_016107444v1 6336938 9 + 6778120 GAGAGAGGT i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111880 162 - 19675229 T e calJac3.chr17 73796390 86 + 74750902 T e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323809 7 - 7796314 I e manLeu1.NW_012102020v1 1368629 0 + 1977891 C e chlSab2.chr15 91322891 0 + 91754291 C e cerAty1.NW_012004056v1 16344060 13 - 16847902 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303473 99 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C a score=474.000000 s hg38.chr3_KI270934v1_alt 21313 1 + 163458 T s panTro5.chr3 200141048 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83317 1 - 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3634 1 + 55620 T i gorGor5.CYUI01001831v1 C 0 C 0 s calJac3.chr17 73796304 1 + 74750902 C i calJac3.chr17 T 86 C 0 s saiBol1.JH378146 17249011 1 - 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6336947 1 + 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2323 107 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111880 162 - 19675229 T e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323809 7 - 7796314 I e manLeu1.NW_012102020v1 1368629 0 + 1977891 C e chlSab2.chr15 91322891 0 + 91754291 C e cerAty1.NW_012004056v1 16344060 13 - 16847902 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303473 99 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C a score=35940.000000 s hg38.chr3_KI270934v1_alt 21314 14 + 163458 TCCACCCCCTAAG---T s panTro5.chr3 200141049 14 + 202621043 TCCACCTGCTAAG---A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83318 14 - 190779 TCCACCCCCTAAG---T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3635 17 + 55620 TCCACCCCCTAAGTGAT i gorGor5.CYUI01001831v1 C 0 C 0 s chlSab2.chr15 91322891 10 + 91754291 ----CCCCCTGAG---T i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368629 9 + 1977891 -----CCCTTGAG---T i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796305 14 + 74750902 TCCACCCCCTGAG---T i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249012 14 - 17725628 TCCACCCCCTGAG---C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6336948 14 + 6778120 TCCACCCCCTGAG---T i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2430 14 - 21398 TCCACCCCCTAAG---T i aotNan1.NW_018492867v1 I 107 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111880 162 - 19675229 T e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323809 7 - 7796314 I e cerAty1.NW_012004056v1 16344060 13 - 16847902 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303473 99 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C a score=15542.000000 s hg38.chr3_KI270934v1_alt 21328 4 + 163458 GATG s panTro5.chr3 200141063 4 + 202621043 GATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83332 4 - 190779 GATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3652 4 + 55620 GATG i gorGor5.CYUI01001831v1 C 0 C 0 s chlSab2.chr15 91322901 4 + 91754291 TATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368638 4 + 1977891 GATG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323816 4 - 7796314 GATG i colAng1.NW_012118932v1 I 7 C 0 s calJac3.chr17 73796319 4 + 74750902 GATG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249026 4 - 17725628 AAAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6336962 4 + 6778120 GATG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2444 4 - 21398 GATG i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111880 162 - 19675229 T e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e cerAty1.NW_012004056v1 16344060 13 - 16847902 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303473 99 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C a score=23870.000000 s hg38.chr3_KI270934v1_alt 21332 4 + 163458 GAGA s panTro5.chr3 200141067 4 + 202621043 GAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83336 4 - 190779 GAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3656 4 + 55620 GAGA i gorGor5.CYUI01001831v1 C 0 C 0 s macNem1.NW_012014355v1 19111718 4 - 19675229 GAGA i macNem1.NW_012014355v1 T 162 C 0 s cerAty1.NW_012004056v1 16344073 4 - 16847902 GAGA i cerAty1.NW_012004056v1 I 13 C 0 s chlSab2.chr15 91322905 4 + 91754291 GAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368642 4 + 1977891 GAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323820 4 - 7796314 GAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796323 4 + 74750902 GGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249030 4 - 17725628 GAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6336966 4 + 6778120 GAGA i cebCap1.NW_016107444v1 C 0 I 184 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2448 0 - 21398 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303473 99 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C a score=79.000000 s hg38.chr3_KI270934v1_alt 21336 2 + 163458 TG s panTro5.chr3 200141071 2 + 202621043 TG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83340 2 - 190779 TG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3660 2 + 55620 TG i gorGor5.CYUI01001831v1 C 0 C 0 s macNem1.NW_012014355v1 19111722 2 - 19675229 GA i macNem1.NW_012014355v1 C 0 I 11 s cerAty1.NW_012004056v1 16344077 2 - 16847902 GA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322909 2 + 91754291 GA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368646 2 + 1977891 GA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323824 2 - 7796314 GA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796327 2 + 74750902 GA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249034 2 - 17725628 CA i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2448 0 - 21398 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303473 99 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C a score=26138.000000 s hg38.chr3_KI270934v1_alt 21338 9 + 163458 GGGTGTCTG s panTro5.chr3 200141073 9 + 202621043 GGGTGTCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83342 9 - 190779 GGGTGTCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3662 9 + 55620 GGGTGTCTG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303374 9 - 204787373 GGGTGTCTA i rheMac8.chr2 T 99 C 0 s cerAty1.NW_012004056v1 16344079 9 - 16847902 GGGTGTCTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322911 9 + 91754291 GGGTGTCTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368648 9 + 1977891 GGGTGTCTA i manLeu1.NW_012102020v1 C 0 T 150 s colAng1.NW_012118932v1 7323826 9 - 7796314 GGGTGTCTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796329 6 + 74750902 GAG---CTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249036 8 - 17725628 GAGT-TCTC i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2448 0 - 21398 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111724 11 - 19675229 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=118239.000000 s hg38.chr3_KI270934v1_alt 21347 30 + 163458 CACCCC-TGAGTGATGGAGAGAGGGTGTCTA s panTro5.chr3 200141082 30 + 202621043 CACCCC-TGATCGATGGAGAGAGGGTGTCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83351 30 - 190779 CACCCC-TGAGCGATGGAGAGAGGGTGTCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3671 30 + 55620 CACCCC-TGAGCGATGGAGAGAGGGTGTCTA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303383 30 - 204787373 CACCCC-CGAGGGATGGAGAGAGGGTGTCTA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111735 23 - 19675229 --------GAGCGATGGAGAGAGGGTGTCTA i macNem1.NW_012014355v1 I 11 C 0 s cerAty1.NW_012004056v1 16344088 30 - 16847902 CAGCCC-TGAGTAATGGAGAGAGGGTGTCTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322920 30 + 91754291 CACCCC-TGAGTGATGGAGAGAGGGTGTCTA i chlSab2.chr15 C 0 T 212 s manLeu1.NW_012102020v1 1368507 30 + 1977891 CACCCC-CGAGCGATGGAGAGAGGGTGTCTA i manLeu1.NW_012102020v1 T 150 C 0 s colAng1.NW_012118932v1 7323835 30 - 7796314 CACCCC-TTAGTGATGGAGAGACGTTGTCTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796335 28 + 74750902 CACCCCCTGAGTGATAGAGAGAG---ATCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249044 28 - 17725628 TACCCCTTGAGAGATGGAGAGAC---ATCTC i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2448 0 - 21398 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=50884.000000 s hg38.chr3_KI270934v1_alt 21377 18 + 163458 CACCC-CTGAGCGATGGAG s panTro5.chr3 200141112 14 + 202621043 CACCC-GTGAGCGAT---- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83381 18 - 190779 CACCC-CTGAGCGATGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3701 18 + 55620 CACCC-CTGAGCGATGGAG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303413 18 - 204787373 CACCC-CTGAGCGATGGAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111758 18 - 19675229 CAGCC-CTGAGCGATGGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344118 8 - 16847902 CACCC-CTG---------- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1368537 18 + 1977891 CACCC-CCGAGCGATGGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323865 18 - 7796314 CACTG-CTGAGTGATGGAG i colAng1.NW_012118932v1 C 0 I 15 s calJac3.chr17 73796363 19 + 74750902 CACCCACTGAGCAATGGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249072 19 - 17725628 CACCCTCTGAGTGATGGAG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2448 0 - 21398 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e chlSab2.chr15 91322950 212 + 91754291 T e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=3893.000000 s hg38.chr3_KI270934v1_alt 21395 2 + 163458 GG s panPan2.chrUn_NW_014024201v1 83399 2 - 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 T 282 s gorGor5.CYUI01001831v1 3719 2 + 55620 AG i gorGor5.CYUI01001831v1 C 0 I 1 s rheMac8.chr2 2303431 2 - 204787373 AG i rheMac8.chr2 C 0 T 114 s macNem1.NW_012014355v1 19111776 2 - 19675229 AG i macNem1.NW_012014355v1 C 0 T 84 s manLeu1.NW_012102020v1 1368555 2 + 1977891 AG i manLeu1.NW_012102020v1 C 0 T 86 s calJac3.chr17 73796382 2 + 74750902 AG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249091 2 - 17725628 AG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2448 0 - 21398 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323883 15 - 7796314 I e chlSab2.chr15 91322950 212 + 91754291 T e cerAty1.NW_012004056v1 16344126 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C e panTro5.chr3 200141126 0 + 202621043 C a score=67.000000 s hg38.chr3_KI270934v1_alt 21397 1 + 163458 G s gorGor5.CYUI01001831v1 3722 1 + 55620 G i gorGor5.CYUI01001831v1 I 1 C 0 s calJac3.chr17 73796384 1 + 74750902 A i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249093 1 - 17725628 A i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2448 0 - 21398 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111778 84 - 19675229 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323883 15 - 7796314 I e manLeu1.NW_012102020v1 1368557 86 + 1977891 T e chlSab2.chr15 91322950 212 + 91754291 T e cerAty1.NW_012004056v1 16344126 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303433 114 - 204787373 T e nomLeu3.chr11 2783436 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 83401 282 - 190779 T e panTro5.chr3 200141126 0 + 202621043 C a score=28971.000000 s hg38.chr3_KI270934v1_alt 21398 24 + 163458 GGTGCCTACACCTGCTGAGCGATA s panTro5.chr3 200141126 1 + 202621043 -----------------------A i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 3723 24 + 55620 GGTGTCTACACCTGCTGAGCAATA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303319 24 - 204787373 GGTGTCTACACCTGCTGAGCCGTG i rheMac8.chr2 T 114 C 0 s macNem1.NW_012014355v1 19111694 24 - 19675229 GGTGTCTACACCTGCTGAGCCATG i macNem1.NW_012014355v1 T 84 C 0 s chlSab2.chr15 91322738 24 + 91754291 GGTGTCTACACCTGCTGAGCCATG i chlSab2.chr15 T 212 C 0 s manLeu1.NW_012102020v1 1368471 24 + 1977891 GGTGTCTACACCTGCTGAGCCATG i manLeu1.NW_012102020v1 T 86 C 0 s calJac3.chr17 73796385 23 + 74750902 -GACACTCCACCCCCTGAGTGATG i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2448 0 - 21398 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249094 0 - 17725628 C e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323883 15 - 7796314 I e cerAty1.NW_012004056v1 16344126 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 83401 282 - 190779 T a score=31889.000000 s hg38.chr3_KI270934v1_alt 21422 17 + 163458 GAGAGAGGTTTCCACCC- s panTro5.chr3 200141127 8 + 202621043 GAGAGAGG---------- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 3747 17 + 55620 GAGAGAGGTTTCCACTC- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783436 17 - 123690457 GAGAGAGGTTTCCACCC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303343 17 - 204787373 GAGAGAGATTTCCACCC- i rheMac8.chr2 C 0 I 73 s macNem1.NW_012014355v1 19111718 17 - 19675229 GAGAGAGATTTCCACCC- i macNem1.NW_012014355v1 C 0 I 43 s chlSab2.chr15 91322762 17 + 91754291 GAAAGAGATTTCCACCC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368495 17 + 1977891 GAGAGAGATTTCCACCC- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796408 18 + 74750902 GAGAGAGACACTCCACCC i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2448 0 - 21398 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249094 0 - 17725628 C e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323883 15 - 7796314 I e cerAty1.NW_012004056v1 16344126 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 83401 282 - 190779 T a score=2000.000000 s hg38.chr3_KI270934v1_alt 21439 2 + 163458 CC s gorGor5.CYUI01001831v1 3764 2 + 55620 CC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783453 2 - 123690457 CC i nomLeu3.chr11 C 0 C 0 s manLeu1.NW_012102020v1 1368512 2 + 1977891 CC i manLeu1.NW_012102020v1 C 0 T 7 s calJac3.chr17 73796426 2 + 74750902 CC i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2448 0 - 21398 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111735 43 - 19675229 I e saiBol1.JH378146 17249094 0 - 17725628 C e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323883 15 - 7796314 I e chlSab2.chr15 91322779 0 + 91754291 C e cerAty1.NW_012004056v1 16344126 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303360 73 - 204787373 I e panPan2.chrUn_NW_014024201v1 83401 282 - 190779 T e panTro5.chr3 200141135 0 + 202621043 C a score=546.000000 s hg38.chr3_KI270934v1_alt 21441 1 + 163458 T s gorGor5.CYUI01001831v1 3766 1 + 55620 T i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783455 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73796428 1 + 74750902 T i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2448 0 - 21398 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111735 43 - 19675229 I e saiBol1.JH378146 17249094 0 - 17725628 C e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323883 15 - 7796314 I e manLeu1.NW_012102020v1 1368514 7 + 1977891 T e chlSab2.chr15 91322779 0 + 91754291 C e cerAty1.NW_012004056v1 16344126 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303360 73 - 204787373 I e panPan2.chrUn_NW_014024201v1 83401 282 - 190779 T e panTro5.chr3 200141135 0 + 202621043 C a score=9150.000000 s hg38.chr3_KI270934v1_alt 21442 13 + 163458 AAGTGATGGAGAT s gorGor5.CYUI01001831v1 3767 13 + 55620 AAGTGATGGAGAT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783456 13 - 123690457 AAGTGATGGAGAG i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16344126 12 - 16847902 -AGTTATGGAGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322779 13 + 91754291 GAGCGATGGAGAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796429 12 + 74750902 GAGTGATGGAGA- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249094 4 - 17725628 --------GAAA- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2448 0 - 21398 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111735 43 - 19675229 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323883 15 - 7796314 I e manLeu1.NW_012102020v1 1368514 7 + 1977891 T e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303360 73 - 204787373 I e panPan2.chrUn_NW_014024201v1 83401 282 - 190779 T e panTro5.chr3 200141135 0 + 202621043 C a score=32416.000000 s hg38.chr3_KI270934v1_alt 21455 15 + 163458 GGGGTGTCTGCACCC- s panTro5.chr3 200141135 12 + 202621043 ---GTGTCTACACCT- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 3780 15 + 55620 GGGGTGTCTGCACCC- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783469 15 - 123690457 GGGGTGTCTACACCC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303433 15 - 204787373 AGGGTGTCTACACCC- i rheMac8.chr2 I 73 C 0 s macNem1.NW_012014355v1 19111778 15 - 19675229 AGGGTGTCTACAGCC- i macNem1.NW_012014355v1 I 43 C 0 s cerAty1.NW_012004056v1 16344138 15 - 16847902 AGGGTGTCTACATCC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322792 15 + 91754291 AGGGTGTCTACACCC- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796441 14 + 74750902 --GAGATCTCCACCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249098 14 - 17725628 --GAGATCTCCACCCT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2448 0 - 21398 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323883 15 - 7796314 I e manLeu1.NW_012102020v1 1368514 7 + 1977891 T e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 83401 282 - 190779 T a score=5500.000000 s hg38.chr3_KI270934v1_alt 21470 1 + 163458 C s panTro5.chr3 200141147 1 + 202621043 C i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 3795 1 + 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783484 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303448 1 - 204787373 C i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111793 1 - 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344153 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322807 1 + 91754291 C i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7323898 1 - 7796314 C i colAng1.NW_012118932v1 I 15 C 0 s calJac3.chr17 73796455 1 + 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249112 1 - 17725628 C i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2448 0 - 21398 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368514 7 + 1977891 T e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 83401 282 - 190779 T a score=70400.000000 s hg38.chr3_KI270934v1_alt 21471 15 + 163458 TGAGCGATGGAGAGA s panTro5.chr3 200141148 15 + 202621043 TGAGCGATGGAGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83119 15 - 190779 TGAGCAATGGAGAGA i panPan2.chrUn_NW_014024201v1 T 282 C 0 s gorGor5.CYUI01001831v1 3796 15 + 55620 TGAGCGATGGAGAGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783485 15 - 123690457 TGAACAACGGAGGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303449 15 - 204787373 CGAGCGATGGAGAGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111794 15 - 19675229 TGAGCGATGGAGAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344154 15 - 16847902 TGAGTTATGGAGAGA i cerAty1.NW_012004056v1 C 0 I 60 s chlSab2.chr15 91322808 13 + 91754291 TGAGCGATGGAGA-- i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7323899 15 - 7796314 TGAGGGATGGAGAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796456 15 + 74750902 TGAGTGATGGAGAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249113 15 - 17725628 TGAGCGATGGCGAGA i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2448 0 - 21398 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368514 7 + 1977891 T e macFas5.chr2 192362332 14732 - 192460366 M a score=38642.000000 s hg38.chr3_KI270934v1_alt 21486 25 + 163458 GGGTATCTACACCTGCTGAGTGATA s panTro5.chr3 200141163 25 + 202621043 GGGTGTCTACACCTGCTGAGCGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83134 25 - 190779 GGGTGTCTACACCTGCTGAGCAATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3811 25 + 55620 GGGTGTCTACACCTGCTGAGCGATG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783500 22 - 123690457 GGG---CTCCGCTCCCTGAGTGATG i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16344229 24 - 16847902 GGTTGTCTACACC-GCTGAGTGATG i cerAty1.NW_012004056v1 I 60 C 0 s colAng1.NW_012118932v1 7323914 24 - 7796314 GGGTGTCTACACC-CCTGAGTGATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796471 22 + 74750902 -G--AGCTCCACACCCTGAGTGATG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249128 24 - 17725628 -GACATCTCCACCCCCTGAGCAGTG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2448 0 - 21398 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111809 0 - 19675229 C e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368514 7 + 1977891 T e chlSab2.chr15 91322821 0 + 91754291 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303464 0 - 204787373 C a score=41555.000000 s hg38.chr3_KI270934v1_alt 21511 21 + 163458 GAG-AGAGGTTTCCACCCCCTA s panTro5.chr3 200141188 21 + 202621043 GAG-AGAGGTTTCCACCCGCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83159 21 - 190779 GAG-AGAGGTTTCCACCTGCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3836 5 + 55620 GAG-AG---------------- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783522 21 - 123690457 GAA-GGAGGGCTCCACCCCCTG i nomLeu3.chr11 C 0 I 9651 s rheMac8.chr2 2303464 16 - 204787373 ----GGGTGTCCACACCCCC-- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111809 16 - 19675229 ----GGGTGTCTACAGCCCT-- i macNem1.NW_012014355v1 C 0 T 90 s cerAty1.NW_012004056v1 16344253 22 - 16847902 GAGAGGATGTCTACACCCCCTG i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 7323938 21 - 7796314 GAG-AGAGGGCTCCACCCCCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796493 21 + 74750902 GAG-AGAGATCTCCACCCCCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249152 21 - 17725628 GAG-AGAGGTCTCCACCCCATG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 2448 21 - 21398 GAG-AGAGATCTCCATCCCCTG i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368514 7 + 1977891 T e chlSab2.chr15 91322821 0 + 91754291 C e macFas5.chr2 192362332 14732 - 192460366 M a score=17434.000000 s hg38.chr3_KI270934v1_alt 21532 7 + 163458 AGTGATG s panTro5.chr3 200141209 7 + 202621043 AGTGATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83180 7 - 190779 AGAGATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2793194 7 - 123690457 AGCGATG i nomLeu3.chr11 I 9651 I 57 s cerAty1.NW_012004056v1 16344275 7 - 16847902 AGTTATG i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 7323959 7 - 7796314 AATGATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796514 7 + 74750902 AGAGATG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249173 7 - 17725628 AGTGATG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 2469 7 - 21398 AGTGATG i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111825 90 - 19675229 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368514 7 + 1977891 T e chlSab2.chr15 91322821 0 + 91754291 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303480 0 - 204787373 C e gorGor5.CYUI01001831v1 3841 0 + 55620 C a score=13752.000000 s hg38.chr3_KI270934v1_alt 21539 4 + 163458 GAGA s panTro5.chr3 200141216 4 + 202621043 GAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83187 4 - 190779 GAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2793258 4 - 123690457 GAGA i nomLeu3.chr11 I 57 C 0 s cerAty1.NW_012004056v1 16344282 4 - 16847902 GAGA i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 7323966 4 - 7796314 GAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796521 4 + 74750902 GAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249180 4 - 17725628 GAGA i saiBol1.JH378146 C 0 T 24 s aotNan1.NW_018492867v1 2476 4 - 21398 GAGA i aotNan1.NW_018492867v1 C 0 I 9676 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111825 90 - 19675229 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368514 7 + 1977891 T e chlSab2.chr15 91322821 0 + 91754291 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303480 0 - 204787373 C e gorGor5.CYUI01001831v1 3841 0 + 55620 C a score=335.000000 s hg38.chr3_KI270934v1_alt 21543 2 + 163458 TG s panTro5.chr3 200141220 2 + 202621043 TG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83191 2 - 190779 TG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3841 1 + 55620 -G i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793262 2 - 123690457 GG i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16344286 2 - 16847902 GA i cerAty1.NW_012004056v1 C 0 T 119 s colAng1.NW_012118932v1 7323970 2 - 7796314 TA i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111825 90 - 19675229 T e saiBol1.JH378146 17249184 24 - 17725628 T e calJac3.chr17 73796525 0 + 74750902 C e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368514 7 + 1977891 T e chlSab2.chr15 91322821 0 + 91754291 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303480 0 - 204787373 C a score=18371.000000 s hg38.chr3_KI270934v1_alt 21545 9 + 163458 -GGGTGTCTG s panTro5.chr3 200141222 9 + 202621043 -GGGTGTCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83193 9 - 190779 -GGGTGTCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3842 9 + 55620 -GGGTGTCTA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793264 9 - 123690457 -GGGTGTCTA i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16344169 9 - 16847902 -GGGTGTCTA i cerAty1.NW_012004056v1 T 119 C 0 s chlSab2.chr15 91322821 9 + 91754291 -GGGTGTCTA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7323972 9 - 7796314 -GGCTGTCTA i colAng1.NW_012118932v1 C 0 T 206 s calJac3.chr17 73796525 8 + 74750902 GAGATCTC-- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111825 90 - 19675229 T e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368514 7 + 1977891 T e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303480 0 - 204787373 C a score=15024.000000 s hg38.chr3_KI270934v1_alt 21554 7 + 163458 CACCCCT- s panTro5.chr3 200141231 7 + 202621043 CACCCCT- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83202 7 - 190779 CACCCCT- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3851 6 + 55620 TA-CCCT- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793273 7 - 123690457 CACCCCT- i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16344178 7 - 16847902 CAGCCCT- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322830 7 + 91754291 CACCCCC- i chlSab2.chr15 C 0 T 58 s manLeu1.NW_012102020v1 1368507 7 + 1977891 CACCCCC- i manLeu1.NW_012102020v1 T 7 C 0 s colAng1.NW_012118932v1 7323775 7 - 7796314 CACCCCC- i colAng1.NW_012118932v1 T 206 C 0 s calJac3.chr17 73796533 8 + 74750902 CACCCCGT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111825 90 - 19675229 T e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2303480 0 - 204787373 C a score=190959.000000 s hg38.chr3_KI270934v1_alt 21561 40 + 163458 GAGCGATGGAGAGAGGGTGTCTACAC-CCCTGAGCGATGGA s panTro5.chr3 200141238 40 + 202621043 GAGCAATGGAGAGAGGGTGTCTACAC-CCCTGAGCGATGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83209 40 - 190779 GATCGATGGAGAGAGGGTGTCTGCAC-CCGTGAGCGATAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3857 40 + 55620 GAGCGATGGAGAGAGGGTGTCTACAC-CCCTGAGTGATGAA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793280 38 - 123690457 GAACAATGGAGGGAGGG---CTCCACTCCCTGAGTGATGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303480 40 - 204787373 GAGCGATGGAGAGAGGGTGTCTACAG-CCCTGAGCGATGGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111735 40 - 19675229 GAGCGATGGAGAGAGGGTGTCTACAG-CCCTGAGCGATGGA i macNem1.NW_012014355v1 T 90 C 0 s cerAty1.NW_012004056v1 16344185 40 - 16847902 GAGGGATGGAGAGAAGGTGTCTACAC-CCCTGAGTGATGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322779 40 + 91754291 GAGCGATGGAGAGAGGGTGTCTACAC-CCCTGAGCGATGGA i chlSab2.chr15 T 58 I 59 s manLeu1.NW_012102020v1 1368514 40 + 1977891 GAGCGATGGAGAGAGGGTGTCTACAC-CCCCGAGCGATGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323782 40 - 7796314 GAGCGATGGAGAGAGGGTGTCTACAC-CCCCGAGGGATGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796541 38 + 74750902 GAGTGATGGAGAGAGAG---CTCCACACCCTGAGAGATGGA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M a score=8318.000000 s hg38.chr3_KI270934v1_alt 21601 2 + 163458 GA s panTro5.chr3 200141278 2 + 202621043 GA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83249 2 - 190779 GA i panPan2.chrUn_NW_014024201v1 C 0 I 30 s gorGor5.CYUI01001831v1 3897 2 + 55620 GG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793318 2 - 123690457 GG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303520 2 - 204787373 GA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111775 2 - 19675229 GA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344225 2 - 16847902 GA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1368554 2 + 1977891 GA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323822 2 - 7796314 GA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796579 2 + 74750902 GA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e chlSab2.chr15 91322819 59 + 91754291 I e macFas5.chr2 192362332 14732 - 192460366 M a score=77656.000000 s hg38.chr3_KI270934v1_alt 21603 22 + 163458 GGGGGTGTCTACA-CCC-CTGAGC s panTro5.chr3 200141280 22 + 202621043 GGGGGTGTCTACA-CCC-CTGAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83281 23 - 190779 GAGGGTGTCTACA-CCTGCTGAGC i panPan2.chrUn_NW_014024201v1 I 30 C 0 s gorGor5.CYUI01001831v1 3899 22 + 55620 GAGGTTGTCTACA-CCC-CTGAGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793320 20 - 123690457 GAGGG---CTCCA-CCCCCTGAGC i nomLeu3.chr11 C 0 T 149 s rheMac8.chr2 2303522 22 - 204787373 GAGGGTGTCTATA-GCC-CTGAGT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111777 22 - 19675229 GAGGGTGTCTACA-GCC-CTGAGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344227 22 - 16847902 GAGGTTGTCTACA-CCG-CTGAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322878 23 + 91754291 GAGGGTGTCTACACCCC-CTGAGT i chlSab2.chr15 I 59 C 0 s manLeu1.NW_012102020v1 1368556 22 + 1977891 GAGGGTGTCTACA-GCC-CTGAGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323824 22 - 7796314 GAGGGTGTCTACA-CCC-CTTAGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796581 20 + 74750902 ---GAGATCTCCA-CCCCCTGAGT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M a score=20091.000000 s hg38.chr3_KI270934v1_alt 21625 8 + 163458 GATGGAGA s panTro5.chr3 200141302 8 + 202621043 GATGGAGA i panTro5.chr3 C 0 T 4413 s panPan2.chrUn_NW_014024201v1 83304 8 - 190779 GATAGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3921 8 + 55620 AATGAAGG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303544 8 - 204787373 GATGGAGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111799 8 - 19675229 GATGGAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344249 6 - 16847902 GATG--GA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322901 5 + 91754291 TATGG--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368578 8 + 1977891 AATGGAGA i manLeu1.NW_012102020v1 C 0 T 72 s colAng1.NW_012118932v1 7323846 8 - 7796314 GATGGAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796601 8 + 74750902 GATGGAGA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793340 149 - 123690457 T a score=14619.000000 s hg38.chr3_KI270934v1_alt 21633 17 + 163458 GAGGATGTCTACACCCC s panPan2.chrUn_NW_014024201v1 83312 2 - 190779 GA--------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3929 17 + 55620 GAGGTTGTCTACACCCC i gorGor5.CYUI01001831v1 C 0 I 38 s rheMac8.chr2 2303552 17 - 204787373 GAGGGTGTCTACAGCCC i rheMac8.chr2 C 0 I 1 s macNem1.NW_012014355v1 19111807 17 - 19675229 GAGGGTGTCTACAGCCC i macNem1.NW_012014355v1 C 0 I 1 s cerAty1.NW_012004056v1 16344255 17 - 16847902 GAGGATGTCTACACCCC i cerAty1.NW_012004056v1 C 0 I 11 s colAng1.NW_012118932v1 7323854 17 - 7796314 GACGTTGTCTACACTGC i colAng1.NW_012118932v1 C 0 I 1 s calJac3.chr17 73796609 17 + 74750902 GAGACACTCCACCCCCT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368586 72 + 1977891 T e chlSab2.chr15 91322906 0 + 91754291 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793340 149 - 123690457 T e panTro5.chr3 200141310 4413 + 202621043 T a score=5393.000000 s hg38.chr3_KI270934v1_alt 21650 7 + 163458 GAACGAT s rheMac8.chr2 2303570 7 - 204787373 GAGTGAT i rheMac8.chr2 I 1 I 2 s macNem1.NW_012014355v1 19111825 7 - 19675229 GAGCGAT i macNem1.NW_012014355v1 I 1 I 2 s colAng1.NW_012118932v1 7323872 7 - 7796314 GAGTGAT i colAng1.NW_012118932v1 I 1 I 2 s calJac3.chr17 73796626 7 + 74750902 GAGTGAT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368586 72 + 1977891 T e chlSab2.chr15 91322906 0 + 91754291 C e cerAty1.NW_012004056v1 16344272 11 - 16847902 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793340 149 - 123690457 T e gorGor5.CYUI01001831v1 3946 38 + 55620 I e panPan2.chrUn_NW_014024201v1 83314 0 - 190779 C e panTro5.chr3 200141310 4413 + 202621043 T a score=1694.000000 s hg38.chr3_KI270934v1_alt 21657 1 + 163458 A s gorGor5.CYUI01001831v1 3984 1 + 55620 A i gorGor5.CYUI01001831v1 I 38 C 0 s rheMac8.chr2 2303579 1 - 204787373 A i rheMac8.chr2 I 2 C 0 s macNem1.NW_012014355v1 19111834 1 - 19675229 A i macNem1.NW_012014355v1 I 2 C 0 s cerAty1.NW_012004056v1 16344283 1 - 16847902 A i cerAty1.NW_012004056v1 I 11 C 0 s chlSab2.chr15 91322906 1 + 91754291 A i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7323881 1 - 7796314 A i colAng1.NW_012118932v1 I 2 C 0 s calJac3.chr17 73796633 1 + 74750902 G i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368586 72 + 1977891 T e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793340 149 - 123690457 T e panPan2.chrUn_NW_014024201v1 83314 0 - 190779 C e panTro5.chr3 200141310 4413 + 202621043 T a score=20962.000000 s hg38.chr3_KI270934v1_alt 21658 13 + 163458 GAGAG-GGTGTCCA s panTro5.chr3 200136897 13 + 202621043 GAGAG-GGTGTCCA i panTro5.chr3 T 4413 C 0 s panPan2.chrUn_NW_014024201v1 83314 8 - 190779 ------GGTTTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 3985 13 + 55620 GAGAG-GGTGTCTA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303580 13 - 204787373 GAGAG-GGTGTCTA i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16344284 13 - 16847902 GAGAG-GGTGTCTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322907 13 + 91754291 GAGAG-GGTGTCTA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7323882 11 - 7796314 GACAG-GGCTCC-- i colAng1.NW_012118932v1 C 0 T 118 s calJac3.chr17 73796634 14 + 74750902 GAGAGAGATCTCCA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111835 0 - 19675229 C e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368586 72 + 1977891 T e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793340 149 - 123690457 T a score=2800.000000 s hg38.chr3_KI270934v1_alt 21671 1 + 163458 C s panTro5.chr3 200136910 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83322 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 T 130 s gorGor5.CYUI01001831v1 3998 1 + 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303593 1 - 204787373 C i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16344297 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322920 1 + 91754291 C i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796648 1 + 74750902 C i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111835 0 - 19675229 C e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323893 118 - 7796314 T e manLeu1.NW_012102020v1 1368586 72 + 1977891 T e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793340 149 - 123690457 T a score=6135.000000 s hg38.chr3_KI270934v1_alt 21672 4 + 163458 ACCC s panTro5.chr3 200136911 4 + 202621043 ACCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 3999 4 + 55620 ACCC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303594 4 - 204787373 ACCC i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16344298 4 - 16847902 AGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322921 4 + 91754291 ACCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796649 3 + 74750902 -CCC i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111835 0 - 19675229 C e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323893 118 - 7796314 T e manLeu1.NW_012102020v1 1368586 72 + 1977891 T e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793340 149 - 123690457 T e panPan2.chrUn_NW_014024201v1 83323 130 - 190779 T a score=5348.000000 s hg38.chr3_KI270934v1_alt 21676 2 + 163458 CT s panTro5.chr3 200136915 2 + 202621043 CT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 4003 2 + 55620 CT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793191 2 - 123690457 CT i nomLeu3.chr11 T 149 C 0 s rheMac8.chr2 2303598 2 - 204787373 CT i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16344302 2 - 16847902 CT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322925 2 + 91754291 CT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796652 2 + 74750902 CT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19111835 0 - 19675229 C e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323893 118 - 7796314 T e manLeu1.NW_012102020v1 1368586 72 + 1977891 T e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 83323 130 - 190779 T a score=-6920.000000 s hg38.chr3_KI270934v1_alt 21678 12 + 163458 GAGCGATG-------------------------------AA--GG s panTro5.chr3 200136917 12 + 202621043 GAGCAATG-------------------------------AA--GG i panTro5.chr3 C 0 I 4381 s gorGor5.CYUI01001831v1 4005 12 + 55620 GAGCGACG-------------------------------AA--GG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793193 11 - 123690457 CAGCGATG-------------------------------GA--G- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303600 10 - 204787373 GAGTGATG-------------------------------GA---- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111835 2 - 19675229 ---------------------------------------GA---- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344304 41 - 16847902 GAGTGATGGAGAGGGTGTCTACACCCCCTGAGTTATGGAGA---- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322927 12 + 91754291 GAGTGATG-------------------------------GAGA-- i chlSab2.chr15 C 0 T 120 s manLeu1.NW_012102020v1 1368514 12 + 1977891 GAGCGATG-------------------------------GAGA-- i manLeu1.NW_012102020v1 T 72 C 0 s calJac3.chr17 73796654 12 + 74750902 GAGTGATG-------------------------------GAGA-- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323893 118 - 7796314 T e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 83323 130 - 190779 T a score=7425.000000 s hg38.chr3_KI270934v1_alt 21690 2 + 163458 GA s panTro5.chr3 200141310 2 + 202621043 GA i panTro5.chr3 I 4381 C 0 s gorGor5.CYUI01001831v1 4017 2 + 55620 GA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793204 1 - 123690457 -A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303610 2 - 204787373 GA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111837 2 - 19675229 GA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344345 2 - 16847902 GA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322819 2 + 91754291 GA i chlSab2.chr15 T 120 C 0 s manLeu1.NW_012102020v1 1368526 2 + 1977891 GA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796666 2 + 74750902 GA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323893 118 - 7796314 T e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 83323 130 - 190779 T a score=34044.000000 s hg38.chr3_KI270934v1_alt 21692 9 + 163458 GGGTGTCTA s panTro5.chr3 200141312 9 + 202621043 GGGTGTCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83193 9 - 190779 GGGTGTCTG i panPan2.chrUn_NW_014024201v1 T 130 C 0 s gorGor5.CYUI01001831v1 4019 9 + 55620 GGGTGTCCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793205 9 - 123690457 GGGTGTCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303612 9 - 204787373 GGGTGTCTA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111839 9 - 19675229 GGGTGTCTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344347 9 - 16847902 GGGTGTCTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322821 9 + 91754291 GGGTGTCTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368528 9 + 1977891 GGGTGTCTA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796668 6 + 74750902 -GATCTC-- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323893 118 - 7796314 T e macFas5.chr2 192362332 14732 - 192460366 M a score=126496.000000 s hg38.chr3_KI270934v1_alt 21701 35 + 163458 CACCC-CT-GAGCGATGGAGAGAGGGTGTCCACACCC s panTro5.chr3 200141321 33 + 202621043 CACCC-CT-GAACGATGGACAGAGGTT-TCCAC-CCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83202 35 - 190779 CACCC-CT-GATCGATGGAGAGAGGGTGTCTGCACCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4028 35 + 55620 CACCC-CT-GAGCGACGGAGAGAGGGTGTCCACACCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793214 34 - 123690457 CACCTGCT-GAGCGATGGAGAGAGGTT-TCCACCCC- i nomLeu3.chr11 C 0 T 57 s rheMac8.chr2 2303621 35 - 204787373 CAGCC-CT-GAGTGATGGAGAGAGGGTGTCTACACCC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111848 35 - 19675229 CAGCC-CT-GAGGGATGGAGAGAGGGTGTCTACAGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344356 35 - 16847902 CACCC-CT-TAGTGATGGAGAGAGGGTGTCTACACCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322830 36 + 91754291 CACCC-CCTGAGTTATGGAGAGAGGGTGTCTACACCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368537 35 + 1977891 CACCC-CC-GAGCGATGGAGAGAGGGTGTCTACAGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323775 35 - 7796314 CACCC-CC-GAGCGATGGAGAGAGGGTGTCTACACCC i colAng1.NW_012118932v1 T 118 C 0 s calJac3.chr17 73796674 35 + 74750902 CACCCACT-GAGCGATGGAGAGAGACACTCCACCCC- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M a score=283281.000000 s hg38.chr3_KI270934v1_alt 21736 76 + 163458 CTGAGCGATG----------------------------------------------------------GAGAGAGGGTGTCTACACCC-CT-GAGCGATGGAGAGAGGGTATCTACACCC-CTGAGCGATGGAGAGA s panTro5.chr3 200141354 76 + 202621043 CTAAGTGATG----------------------------------------------------------GAGATGGGGTGTCTGCACCC-CT-GAGCGATGGAGATGGGGTGTCTGCACCC-CTGAGCGATGGAGATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83237 77 - 190779 GTGAGCGATA----------------------------------------------------------GAGAGAGGGTGTCTACACCT-CT-GAGCGATGGAGAGAGGGTGTCTACACCTGCTGAGCGATAGAGAGA i panPan2.chrUn_NW_014024201v1 C 0 I 38 s gorGor5.CYUI01001831v1 4063 75 + 55620 CTGAGCGACG----------------------------------------------------------GAGGGAGGGTGTCCACACC--CT-GAGCGACGGAGGGAGGGTGTCCACACCC-CTGAGCGACGGAGAGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793191 73 - 123690457 CTCAGCGATG----------------------------------------------------------GAG--AGGGTGTCTACACCTGCT-GAGCGATGGAGAGAGGTT-TCCAC-CCC-CTAAGTGATGGAGAGG i nomLeu3.chr11 T 57 C 0 s rheMac8.chr2 2303656 74 - 204787373 CTGAGTGATG------------------------------------------------------------GAGAGGGTGTCTACAGCC-CT-GAGTGATGGAGAGAGGGTGTCTACACCC-CTGAGTGATGGAGAGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111883 76 - 19675229 CTGAGGGATG----------------------------------------------------------GAGAGAGGGTGTCTACAGCC-CT-GAGGGATGGAGAGAGGGTGTCTACACCC-CTGAGGGATGGAGAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344391 134 - 16847902 CTGAGTGATGGAGACAGGGCTCCAGCCACTGAGGGATGGAGATAGGCTGTCTACACTTGTGACTGATGGAGAGAGGGTGTCTACACCC-CT-GAGCGATGGAGAGAGAGTGTCTACAGCC-CTGAGGGATGGAGAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322866 75 + 91754291 CTGAGTGATG------------------------------------------------------------GAGAGGGTGTCTACACCC-CCTGAGTTATGGAGAGAGGGTGTCTACACCC-CTGAGTGATGGAGAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368572 76 + 1977891 CTGAGTAATG----------------------------------------------------------GAGAGAGGGTGTCTACACCC-CC-GAGGGATGGAGAGAGGGTGTCTACACCC-TTGAGTGATGGAGAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323810 76 - 7796314 CCGAGGGATG----------------------------------------------------------GAGAGAGGGTGTCTACACCC-CT-TAGTGATGGAGAGACGTTGTCTACACTG-CTGAGTGATGGAGACA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796709 74 + 74750902 CTGAGTGATG----------------------------------------------------------GAGAGAGACACTCCAC-CCC-CT-GAGTGATGGAGAGAGACACTCCAC-CCC-CTGAGTGATGGAGAGA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M a score=15190.000000 s hg38.chr3_KI270934v1_alt 21812 3 + 163458 GGG s panTro5.chr3 200141430 3 + 202621043 GGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 4138 3 + 55620 GGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793264 3 - 123690457 GGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303730 3 - 204787373 GGG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111959 3 - 19675229 GGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344525 3 - 16847902 GGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322941 3 + 91754291 GGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368648 3 + 1977891 GGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323886 3 - 7796314 GGG i colAng1.NW_012118932v1 C 0 I 28 s calJac3.chr17 73796783 3 + 74750902 GAG i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 83314 38 - 190779 I a score=3785.000000 s hg38.chr3_KI270934v1_alt 21815 1 + 163458 T s panTro5.chr3 200141433 1 + 202621043 T i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 4141 1 + 55620 T i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793267 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303733 1 - 204787373 T i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111962 1 - 19675229 T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344528 1 - 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322944 1 + 91754291 T i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368651 1 + 1977891 T i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323917 1 - 7796314 T i colAng1.NW_012118932v1 I 28 C 0 s calJac3.chr17 73796786 1 + 74750902 C i calJac3.chr17 C 0 I 56 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 83314 38 - 190779 I a score=20058.000000 s hg38.chr3_KI270934v1_alt 21816 5 + 163458 -GTCTA s panTro5.chr3 200141434 5 + 202621043 -GTCTG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 4142 5 + 55620 -GTCCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793268 5 - 123690457 -GTCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303734 5 - 204787373 -GTCTA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111963 5 - 19675229 -GTCTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344529 5 - 16847902 -GTCTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322945 5 + 91754291 -GTCTA i chlSab2.chr15 C 0 T 89 s manLeu1.NW_012102020v1 1368652 5 + 1977891 -GTCTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323918 5 - 7796314 -GTCTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796843 6 + 74750902 GCTCCA i calJac3.chr17 I 56 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 83314 38 - 190779 I a score=30256.000000 s hg38.chr3_KI270934v1_alt 21821 24 + 163458 CA-CCCCTGAGCGATGAAGGGAGGG s panTro5.chr3 200141439 24 + 202621043 CA-CCCCTGAGTGATGGAGAGAGGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 4147 22 + 55620 CA-CCTCTGAGCGACGGAGG--GGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793273 24 - 123690457 CA-CCCCTGAACAATGGAGGGAGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303739 25 - 204787373 TACCCCCTGAGTTATGGAGAGAGGG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111968 22 - 19675229 CA-GCCCTGAGTGATG--GAGACGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344534 22 - 16847902 CA-GCCCTGAGTGATG--GAGACGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322861 22 + 91754291 CA-CCCCTGAGTGATG--GAGAGGG i chlSab2.chr15 T 89 C 0 s manLeu1.NW_012102020v1 1368657 12 + 1977891 CA-CCCCTGAGTG------------ i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323923 24 - 7796314 CA-CCCCTGAGTGATGGAGAGAGGG i colAng1.NW_012118932v1 C 0 I 6 s calJac3.chr17 73796849 1 + 74750902 ------C------------------ i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 83314 38 - 190779 I a score=1694.000000 s hg38.chr3_KI270934v1_alt 21845 1 + 163458 T s panTro5.chr3 200141463 1 + 202621043 T i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 4169 1 + 55620 T i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793297 1 - 123690457 C i nomLeu3.chr11 C 0 T 107 s rheMac8.chr2 2303764 1 - 204787373 T i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111990 1 - 19675229 T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344556 1 - 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322883 1 + 91754291 T i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e calJac3.chr17 73796850 0 + 74750902 C e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323947 6 - 7796314 I e manLeu1.NW_012102020v1 1368669 0 + 1977891 C e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 83314 38 - 190779 I a score=21894.000000 s hg38.chr3_KI270934v1_alt 21846 46 + 163458 GTCTATAGCCCTGAGCA-CCCCTGAGCGATGAAGGGAG----------------------------G-GTGTCTAT s panTro5.chr3 200141464 36 + 202621043 GTCTA----------CA-CCCCTGAGCGATGAAGGGAG----------------------------G-GTGTCTAC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 4170 36 + 55620 GTCCA----------CA-CCCCTGAGCGACGGAGAGGG----------------------------G-GTGTCCAC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303765 36 - 204787373 GTCTA----------CA-CCCCTGAGTAATGGAGAGAG----------------------------G-GTGTCTAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19111991 14 - 19675229 GTCTA----------CA-CCCCTGA--------------------------------------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344557 64 - 16847902 GTCTA----------CA-CCCCTGAATGATGGAGAGGGTGTCTACATCCCTGAGTGTTGGAGAGATG-ATGTCTAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322884 37 + 91754291 GTCTA----------CACCCCCTGAGTTATGGAGAGAG----------------------------G-GTGTCTAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368669 19 + 1977891 ----------------------------ATGGAGAGAG----------------------------G-GTGTCTAC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796850 28 + 74750902 ------------------CCCCTGAGAGATGGAGAGAG----------------------------ACATCTCT-- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323947 6 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793298 107 - 123690457 T e panPan2.chrUn_NW_014024201v1 83314 38 - 190779 I a score=2300.000000 s hg38.chr3_KI270934v1_alt 21892 1 + 163458 A s panTro5.chr3 200141500 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83352 1 - 190779 A i panPan2.chrUn_NW_014024201v1 I 38 C 0 s gorGor5.CYUI01001831v1 4206 1 + 55620 A i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303801 1 - 204787373 A i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16344621 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322921 1 + 91754291 A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368688 1 + 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796878 1 + 74750902 A i calJac3.chr17 C 0 I 1 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19112005 0 - 19675229 C e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323947 6 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793298 107 - 123690457 T a score=8370.000000 s hg38.chr3_KI270934v1_alt 21893 3 + 163458 CCC s panTro5.chr3 200141501 3 + 202621043 CCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83353 3 - 190779 CCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4207 3 + 55620 CCT i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303802 3 - 204787373 GCC i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16344622 3 - 16847902 CAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322922 3 + 91754291 CCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368689 3 + 1977891 CCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323953 3 - 7796314 CCC i colAng1.NW_012118932v1 I 6 C 0 s calJac3.chr17 73796880 3 + 74750902 CCC i calJac3.chr17 I 1 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19112005 0 - 19675229 C e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793298 107 - 123690457 T a score=103200.000000 s hg38.chr3_KI270934v1_alt 21896 43 + 163458 CTGAGCGATGGAGAG----------------------------AGGGTGTCTACACCC-CTGAGCGATGGAG s panTro5.chr3 200141504 43 + 202621043 CTGAGCGATGGAGAG----------------------------AGGGTGTCTACACCC-CTGAGCGATGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83356 43 - 190779 CTGAGCGATGGAGAG----------------------------AGGGTGTCTACACCC-CTGAGCGATGGAG i panPan2.chrUn_NW_014024201v1 C 0 T 216 s gorGor5.CYUI01001831v1 4210 43 + 55620 CTGAGCGATGGAGAG----------------------------GGGGTGTCTACACCC-CTAAGCGATGGAG i gorGor5.CYUI01001831v1 C 0 I 59 s nomLeu3.chr11 2793191 42 - 123690457 CTCAGCGATGGAGA------------------------------GGGTGTCTACACCTGCTGAGCGATGGAG i nomLeu3.chr11 T 107 C 0 s rheMac8.chr2 2303805 41 - 204787373 CTGAGTGATGGAGAG----------------------------AGGGTGTCTACACCC-CTGAGTGATG--G i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112005 24 - 19675229 --GAGTGATGGAGAG----------------------------AGGG---CTCCACC--------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344625 69 - 16847902 CTGAGTGATGGAGAGGATGTCTAAAATCCTGAGTGTTGGAGCGAGGGTGTCTACACCC-CAGAGTGATG--G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322925 28 + 91754291 CTGAGTGATGGAGAG----------------------------AGGGTGTCTACAC---------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368692 28 + 1977891 CTGAGCGATGGAGAG----------------------------AGGGTGTCTACAG---------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323956 43 - 7796314 CTGAATGATGGAGAT----------------------------AGGCTGTCTACACTT-CTGACTGATGGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796883 41 + 74750902 CTGAGAGATGGAGAG----------------------------AGA---TCTCCACCCCCTGAGTGATGGAG i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M a score=10862.000000 s hg38.chr3_KI270934v1_alt 21939 23 + 163458 ---AGGGGGTGTCTACA-CCCCTGAGC s panTro5.chr3 200141547 23 + 202621043 ---AGAGGGTGTCTACA-CCCCTGAGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 4312 23 + 55620 ---ATGGGGTGTCTGCA-CCCCTGAGC i gorGor5.CYUI01001831v1 I 59 C 0 s nomLeu3.chr11 2793233 21 - 123690457 ----AGAGGTTTCCAC--CCCCTAAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303846 23 - 204787373 ---AGAGGGTGTCTACA-GCCCTGAGT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112029 8 - 19675229 -------------------CCCTGAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344694 23 - 16847902 ---AGAGAGGGCTCCAC-CCCCTGAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322953 8 + 91754291 -------------------CCCTGAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368720 8 + 1977891 -------------------CCCTGAGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323999 23 - 7796314 ---AGAGGGTGTCTACA-CTCCTGAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796924 27 + 74750902 AGAGAGAAGAATCTCCACCCCCCGAGA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e panPan2.chrUn_NW_014024201v1 83399 216 - 190779 T a score=51141.000000 s hg38.chr3_KI270934v1_alt 21962 14 + 163458 GATGGAGAGGGGGT s panTro5.chr3 200141570 14 + 202621043 GATGGAGGGAAGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83183 14 - 190779 GATGGAGATGGGGT i panPan2.chrUn_NW_014024201v1 T 216 C 0 s gorGor5.CYUI01001831v1 4335 14 + 55620 GATGGAGAGGGGGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793254 14 - 123690457 GATGGAGAGGGGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303869 14 - 204787373 GATGGAGAGAGGGT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112037 14 - 19675229 GATGTAAAAACGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344717 14 - 16847902 GATGTAAAAACGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322961 14 + 91754291 GATGGAGAGAGGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368728 14 + 1977891 GATGGAGAGAGGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324022 14 - 7796314 GATGGAGAGCGGGT i colAng1.NW_012118932v1 C 0 T 169 s calJac3.chr17 73796951 13 + 74750902 GATGGAGAGAGAT- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M a score=119083.000000 s hg38.chr3_KI270934v1_alt 21976 30 + 163458 GTCTACACCCCTGAGCGATGGAGAGAGGAT s panTro5.chr3 200141584 30 + 202621043 GTCTACACCCCTGAGCGATGGAGGGAGGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83197 30 - 190779 GTCTGCACCCCTGATCGATGGAGAGAGGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4349 30 + 55620 GTCTACACCCCTGAGTGATGGAGAGAGGAT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793268 30 - 123690457 GTCTACACCCCTGAACAATGGAGGGAGGGC i nomLeu3.chr11 C 0 T 97 s rheMac8.chr2 2303883 30 - 204787373 GTCTACACCCCTGAGTGATGGAGAGAGGGT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112051 30 - 19675229 GTCTACACCCCTGAGTGATGGAGAGAGGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344731 30 - 16847902 GTCTACACCCCTGAGTGATGGAGAGAGGTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322975 30 + 91754291 GTCTACACCCCTGAGTGATGGAGAGAGGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368742 30 + 1977891 GTCTACACCCCTTAGTGATGGAGAGAGGTT i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796964 28 + 74750902 CTCCAC-CCCCTGAACAATGGAGAGAAGT- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7324036 169 - 7796314 T e macFas5.chr2 192362332 14732 - 192460366 M a score=5904.000000 s hg38.chr3_KI270934v1_alt 22006 5 + 163458 GTCT----------------------------A s panTro5.chr3 200141614 5 + 202621043 GTCT----------------------------A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83227 5 - 190779 GTCT----------------------------G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4379 33 + 55620 GTCTATACCCCTGAGCGATGGAGAGGGTGTCCA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303913 5 - 204787373 GTCT----------------------------A i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112081 5 - 19675229 GTCT----------------------------A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344761 5 - 16847902 GTCT----------------------------A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323005 5 + 91754291 GTCT----------------------------A i chlSab2.chr15 C 0 T 60 s manLeu1.NW_012102020v1 1368772 5 + 1977891 GTCT----------------------------A i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796992 5 + 74750902 CTCC----------------------------A i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7324036 169 - 7796314 T e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793298 97 - 123690457 T a score=11466.000000 s hg38.chr3_KI270934v1_alt 22011 4 + 163458 CACC- s panTro5.chr3 200141619 4 + 202621043 CACC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83232 4 - 190779 CACC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4412 4 + 55620 CACC- i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303918 4 - 204787373 CACC- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112086 4 - 19675229 CACC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344766 4 - 16847902 CACC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322950 4 + 91754291 CACC- i chlSab2.chr15 T 60 C 0 s manLeu1.NW_012102020v1 1368777 4 + 1977891 CACC- i manLeu1.NW_012102020v1 C 0 I 58 s calJac3.chr17 73796997 3 + 74750902 --CCC i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7324036 169 - 7796314 T e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793298 97 - 123690457 T a score=123777.000000 s hg38.chr3_KI270934v1_alt 22015 43 + 163458 CCTGAGCGATGAAGGGAGGGTGTCTACA-CCCCTGAGGGATGGA s panTro5.chr3 200141623 43 + 202621043 CCTGAGCGATGGAGGGAGGGTGTCTACA-CCCCTGAACGATGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83236 43 - 190779 CGTGAGCGATAGAGAGAGGGTGTCTACA-CCTCTGAGCGATGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4416 43 + 55620 CCTGAGCGATGAAGGGAGGGTGTCTACA-CCCCTGAGCGGTGGA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2303922 41 - 204787373 CCTGAGTGATG--GAGAGGGTGTCTACA-GCCCTGAGTGATGGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112090 41 - 19675229 CCTGAGTGATG--GAGAGGGTGTCTACA-CCCCTTAGTGATGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344770 41 - 16847902 CCTGAGTGATG--GAGAGGGTGTCTACA-TCCCTGAGTGATGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322954 43 + 91754291 CCTGAGTGATGGAGAGAGGGTGTCTACA-CCCCTGAGTGATGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368839 43 + 1977891 TGTGACTGATGGAGAGAGGGTGTCTACA-CTCCTGAGTGATGGA i manLeu1.NW_012102020v1 I 58 C 0 s calJac3.chr17 73797000 43 + 74750902 CCTGAGCCATGGAAAGAGAG-ATCTCCACCCCCTGAGCCATGGA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7324036 169 - 7796314 T e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793298 97 - 123690457 T a score=10705.000000 s hg38.chr3_KI270934v1_alt 22058 3 + 163458 GAG s panTro5.chr3 200141666 3 + 202621043 GAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83279 3 - 190779 GAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4459 3 + 55620 GAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793201 3 - 123690457 GAG i nomLeu3.chr11 T 97 C 0 s rheMac8.chr2 2303963 3 - 204787373 GAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112131 3 - 19675229 GAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344811 2 - 16847902 GA- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322997 3 + 91754291 GAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368882 3 + 1977891 GAG i manLeu1.NW_012102020v1 C 0 T 104 s calJac3.chr17 73797043 3 + 74750902 GAG i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7324036 169 - 7796314 T e macFas5.chr2 192362332 14732 - 192460366 M a score=3276.000000 s hg38.chr3_KI270934v1_alt 22061 1 + 163458 A s panTro5.chr3 200141669 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83282 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4462 1 + 55620 A i gorGor5.CYUI01001831v1 C 0 T 207 s nomLeu3.chr11 2793204 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303966 1 - 204787373 A i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112134 1 - 19675229 A i macNem1.NW_012014355v1 C 0 T 130 s chlSab2.chr15 91323000 1 + 91754291 A i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73797046 1 + 74750902 A i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7324036 169 - 7796314 T e manLeu1.NW_012102020v1 1368885 104 + 1977891 T e cerAty1.NW_012004056v1 16344813 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M a score=7623.000000 s hg38.chr3_KI270934v1_alt 22062 5 + 163458 GGGTG s panTro5.chr3 200141670 5 + 202621043 GGGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83283 5 - 190779 GGGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4256 5 + 55620 GGGTG i gorGor5.CYUI01001831v1 T 207 C 0 s nomLeu3.chr11 2793205 5 - 123690457 GGGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303967 5 - 204787373 GGGTG i rheMac8.chr2 C 0 C 0 s chlSab2.chr15 91323001 5 + 91754291 GGGTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73797047 4 + 74750902 GAGA- i calJac3.chr17 C 0 T 264 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19112135 130 - 19675229 T e saiBol1.JH378146 17249184 24 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7324036 169 - 7796314 T e manLeu1.NW_012102020v1 1368885 104 + 1977891 T e cerAty1.NW_012004056v1 16344813 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M a score=5348.000000 s hg38.chr3_KI270934v1_alt 22067 2 + 163458 TC s panTro5.chr3 200141675 2 + 202621043 TC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83288 2 - 190779 TC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4261 2 + 55620 TC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793210 2 - 123690457 TC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303972 2 - 204787373 TC i rheMac8.chr2 C 0 C 0 s chlSab2.chr15 91323006 2 + 91754291 TC i chlSab2.chr15 C 0 T 58 s saiBol1.JH378146 17249160 2 - 17725628 TC i saiBol1.JH378146 T 24 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19112135 130 - 19675229 T e calJac3.chr17 73797051 264 + 74750902 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7324036 169 - 7796314 T e manLeu1.NW_012102020v1 1368885 104 + 1977891 T e cerAty1.NW_012004056v1 16344813 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M a score=1791.000000 s hg38.chr3_KI270934v1_alt 22069 2 + 163458 CA s panTro5.chr3 200141677 2 + 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83290 2 - 190779 TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4263 2 + 55620 TA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793212 2 - 123690457 TA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303974 2 - 204787373 TA i rheMac8.chr2 C 0 C 0 s calJac3.chr17 73796787 2 + 74750902 TC i calJac3.chr17 T 264 C 0 s saiBol1.JH378146 17249162 2 - 17725628 TC i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 2480 9676 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19112135 130 - 19675229 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7324036 169 - 7796314 T e manLeu1.NW_012102020v1 1368885 104 + 1977891 T e chlSab2.chr15 91323008 58 + 91754291 T e cerAty1.NW_012004056v1 16344813 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M a score=10476.000000 s hg38.chr3_KI270934v1_alt 22071 3 + 163458 CAC s panTro5.chr3 200141679 3 + 202621043 CAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83292 3 - 190779 CAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4265 3 + 55620 CAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793214 3 - 123690457 CAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303976 3 - 204787373 CAC i rheMac8.chr2 C 0 C 0 s calJac3.chr17 73796789 3 + 74750902 CAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249164 3 - 17725628 CAC i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 12156 3 - 21398 CAC i aotNan1.NW_018492867v1 I 9676 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19112135 130 - 19675229 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7324036 169 - 7796314 T e manLeu1.NW_012102020v1 1368885 104 + 1977891 T e chlSab2.chr15 91323008 58 + 91754291 T e cerAty1.NW_012004056v1 16344813 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M a score=5721.000000 s hg38.chr3_KI270934v1_alt 22074 2 + 163458 CT s panTro5.chr3 200141682 2 + 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83295 2 - 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4268 2 + 55620 CT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793217 2 - 123690457 CT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303979 2 - 204787373 CC i rheMac8.chr2 C 0 C 0 s colAng1.NW_012118932v1 7323867 2 - 7796314 CT i colAng1.NW_012118932v1 T 169 C 0 s calJac3.chr17 73796792 2 + 74750902 CC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249167 2 - 17725628 CC i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 12159 2 - 21398 CC i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19112135 130 - 19675229 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368885 104 + 1977891 T e chlSab2.chr15 91323008 58 + 91754291 T e cerAty1.NW_012004056v1 16344813 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M a score=7777.000000 s hg38.chr3_KI270934v1_alt 22076 3 + 163458 GCT s panTro5.chr3 200141684 3 + 202621043 GCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83297 3 - 190779 GCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4270 3 + 55620 GCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793219 3 - 123690457 GCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303981 2 - 204787373 -CT i rheMac8.chr2 C 0 C 0 s manLeu1.NW_012102020v1 1368781 3 + 1977891 GCT i manLeu1.NW_012102020v1 T 104 C 0 s colAng1.NW_012118932v1 7323869 3 - 7796314 GCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796794 3 + 74750902 CTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249169 3 - 17725628 CAT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 12161 3 - 21398 GCT i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19112135 130 - 19675229 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e chlSab2.chr15 91323008 58 + 91754291 T e cerAty1.NW_012004056v1 16344813 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M a score=182221.000000 s hg38.chr3_KI270934v1_alt 22079 40 + 163458 GAGTGATAGAGAGAGGT---TTCCACCCCCTAAGTGATGGAGA s panTro5.chr3 200141687 40 + 202621043 GAGCGATAGAGAGAGGT---TACCACCCCCTAAGTGATGGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83300 40 - 190779 GAGCGATAGAGAGAGGT---TTCCACCCCCTAAGTGATGGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4273 40 + 55620 GAGCAATAGAGAGAGGT---TTCCACTCCCTAAGTGATGGAGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793222 40 - 123690457 GAGCGATGGAGAGAGGT---TTCCACCCCCTAAGTGATGGAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2303983 43 - 204787373 GAGTGATGGAGAGAGGGTGTCTATACCCCCTGAGTTATGGAGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112005 40 - 19675229 GAGTGATGGAGAGAGGG---CTCCACCCCCTGAGTGATGTAAA i macNem1.NW_012014355v1 T 130 C 0 s manLeu1.NW_012102020v1 1368784 40 + 1977891 GAGTGATGGAGACAGGG---CTCCAGCCACTGAGGGATGGAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323872 40 - 7796314 GAGTGATGGAGACAGGG---CTCCAGCCACTGAGGGATGGAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796797 40 + 74750902 GAGTGATGGAGAGAGAT---CTCCACCCCCTGAGTGATGGAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249172 40 - 17725628 GAGTGATGGAGAGAGGT---TTCTACCCCCTGAGAGATGGGGA i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 12164 40 - 21398 GAGTGGTGGAGAGAGAT---CTCCACCCCCTGAGTGGTGGAGA i aotNan1.NW_018492867v1 C 0 I 43 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e chlSab2.chr15 91323008 58 + 91754291 T e cerAty1.NW_012004056v1 16344813 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M a score=30.000000 s hg38.chr3_KI270934v1_alt 22119 2 + 163458 TG s panTro5.chr3 200141727 2 + 202621043 TG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83340 2 - 190779 TG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4313 2 + 55620 TG i gorGor5.CYUI01001831v1 C 0 I 148 s nomLeu3.chr11 2793262 2 - 123690457 GG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2304026 2 - 204787373 GA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112045 2 - 19675229 AA i macNem1.NW_012014355v1 C 0 I 88 s manLeu1.NW_012102020v1 1368824 2 + 1977891 TA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323912 2 - 7796314 GA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796837 1 + 74750902 -G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249212 1 - 17725628 -G i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e chlSab2.chr15 91323008 58 + 91754291 T e cerAty1.NW_012004056v1 16344813 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M a score=33282.000000 s hg38.chr3_KI270934v1_alt 22121 9 + 163458 GGGTGTCTG s panTro5.chr3 200141729 9 + 202621043 GGGTATCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83342 9 - 190779 GGGTGTCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4463 9 + 55620 GGGTGTCTA i gorGor5.CYUI01001831v1 I 148 C 0 s nomLeu3.chr11 2793264 9 - 123690457 GGGTGTCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2304028 9 - 204787373 GGGTGTCTA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112135 9 - 19675229 GGGTGTCTA i macNem1.NW_012014355v1 I 88 C 0 s cerAty1.NW_012004056v1 16344813 9 - 16847902 GGGTGTCTA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1368826 9 + 1977891 GGCTGTCTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323914 9 - 7796314 GGGTGTCTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796838 9 + 74750902 AGACAGCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249213 8 - 17725628 GGG-GTCTC i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e chlSab2.chr15 91323008 58 + 91754291 T e macFas5.chr2 192362332 14732 - 192460366 M a score=48965.000000 s hg38.chr3_KI270934v1_alt 22130 11 + 163458 CACCCCT-GAGC s panTro5.chr3 200141738 11 + 202621043 CACCCCT-GAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83351 11 - 190779 CACCCCT-GAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4472 11 + 55620 TACCCCT-GAGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793273 11 - 123690457 CACCCCT-GAAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2304037 11 - 204787373 CACCCCT-GAGT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112144 11 - 19675229 CACTGCT-GAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344822 11 - 16847902 CACCCCT-TAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322950 11 + 91754291 CACCCCT-GAGT i chlSab2.chr15 T 58 C 0 s manLeu1.NW_012102020v1 1368835 11 + 1977891 CACTTGT-GACT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323923 11 - 7796314 CACCCCT-GAGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796847 12 + 74750902 CACCCCCTGAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249221 11 - 17725628 CACCCTC-GAGC i saiBol1.JH378146 C 0 T 258 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M a score=9977.000000 s hg38.chr3_KI270934v1_alt 22141 2 + 163458 GA s panTro5.chr3 200141749 2 + 202621043 GA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83362 2 - 190779 GA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4483 2 + 55620 GA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793284 2 - 123690457 AA i nomLeu3.chr11 C 0 T 9860 s rheMac8.chr2 2304048 2 - 204787373 AA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112155 2 - 19675229 GA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344833 2 - 16847902 GA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322961 2 + 91754291 GA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368846 2 + 1977891 GA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323934 2 - 7796314 GA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796859 2 + 74750902 GA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249232 258 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M a score=147585.000000 s hg38.chr3_KI270934v1_alt 22143 37 + 163458 TGGAGAGAGG-GTGTCTACACCCCTGAGCGGTGGAGAG s panTro5.chr3 200141751 37 + 202621043 TGGAGAGAGG-GTGTCTACACCCCTGAGCGCTGAAGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83364 37 - 190779 TGGAGAGAGG-GTGTCTACACCCCTGAGCGATGGAGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4485 37 + 55620 TGGAGAGAGG-GTGTCTACACCCCTGAGCGATGGAGAG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2304050 37 - 204787373 TGGAGAGAGG-GTGTCTACACCCCTGAGTGATGGAGAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112157 37 - 19675229 TGGAGAGAGG-GTGTCTACACCCCTTAGTGATGGAGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344835 37 - 16847902 TGGAGAGAGG-GTGTCTACACTGCTGAGTGATGGAGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91322963 37 + 91754291 TGGAGAGAGG-GTGTCTACACCCCTGAGTGATGGAGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368848 37 + 1977891 TGGAGAGAGG-GTGTCTACACTCCTGAGTGATGGAGAG i manLeu1.NW_012102020v1 C 0 T 303 s colAng1.NW_012118932v1 7323936 35 - 7796314 TGGAGAGAGG-GC-TCCAC-CCCCTGAATGATGGAGAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796861 37 + 74750902 TGGAGAGAGACATCTCTAC-CCCCTGAGAGATGGAGAG i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249232 258 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T a score=5828.000000 s hg38.chr3_KI270934v1_alt 22180 2 + 163458 AG s panTro5.chr3 200141788 2 + 202621043 AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83401 2 - 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 T 149 s gorGor5.CYUI01001831v1 4522 2 + 55620 AG i gorGor5.CYUI01001831v1 C 0 C 0 s macNem1.NW_012014355v1 19112194 2 - 19675229 AA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344872 2 - 16847902 AG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323000 2 + 91754291 AG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7323971 2 - 7796314 AG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796898 2 + 74750902 AG i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249232 258 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368885 303 + 1977891 T e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2304087 0 - 204787373 C e nomLeu3.chr11 2793286 9860 - 123690457 T a score=25529.000000 s hg38.chr3_KI270934v1_alt 22182 8 + 163458 GGTGTCTA s panTro5.chr3 200141790 8 + 202621043 GGTGTCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83254 8 - 190779 GGTGTCTA i panPan2.chrUn_NW_014024201v1 T 149 C 0 s gorGor5.CYUI01001831v1 4524 8 + 55620 GGTGTCTA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2304087 8 - 204787373 GGTGTCTA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112196 8 - 19675229 GTTGTCTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344874 8 - 16847902 GGTGTCTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323002 8 + 91754291 GGTGTCTA i chlSab2.chr15 C 0 T 6951 s colAng1.NW_012118932v1 7323973 8 - 7796314 GCTGTCTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796900 7 + 74750902 -ATCTCCA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249232 258 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368885 303 + 1977891 T e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T a score=44220.000000 s hg38.chr3_KI270934v1_alt 22190 15 + 163458 CACCCCTGAGCGATG s panTro5.chr3 200141798 15 + 202621043 CACCCCTGAGCGATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83262 15 - 190779 CACCTCTGAGCGATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4532 15 + 55620 TACCCCTGAGCGATG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2304095 15 - 204787373 CAGCCCTGAGTGATG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112204 15 - 19675229 CACCGCTGAGTGATG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344882 15 - 16847902 TACCCCTTAGTGATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316059 15 + 91754291 TAGCCCTGAGTGATG i chlSab2.chr15 T 6951 C 0 s colAng1.NW_012118932v1 7323981 15 - 7796314 CACTTCTGACTGATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73796907 14 + 74750902 -CCCCCTGAGTGATG i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249232 258 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368885 303 + 1977891 T e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T a score=83175.000000 s hg38.chr3_KI270934v1_alt 22205 30 + 163458 AAGGGAGGGTGTCTACA-CCC-CTGAGCGATG s panTro5.chr3 200141813 30 + 202621043 GAGAGAGGGTGTCTACA-CCC-CTGAGCGATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83277 31 - 190779 GAGAGAGGGTGTCTACA-CCTGCTGAGCGATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 4547 30 + 55620 AAGGAAGGGTGTCTACA-CCC-CTGAGCAATG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2304110 30 - 204787373 GAGAGAGGGTGTCTACA-CCC-CTGAGTGATG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112219 29 - 19675229 --GAGAGGATGTCTACACCCC-CTGAGTTATG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344897 30 - 16847902 GAGAGAGGTTGTCTACA-CTG-CTGAGTGATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316074 30 + 91754291 GAGAGAGGGTGTCTACA-CCG-CTGAGTGATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368582 30 + 1977891 GAGAGAGGGTGTCTACA-CCC-CCGAGGGATG i manLeu1.NW_012102020v1 T 303 C 0 s colAng1.NW_012118932v1 7323996 30 - 7796314 GAGAGAGGGTGTCTACA-CTC-CTGAGAGATG i colAng1.NW_012118932v1 C 0 T 128 s calJac3.chr17 73796921 9 + 74750902 GAGAGAGAG----------------------- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249232 258 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T a score=11221.000000 s hg38.chr3_KI270934v1_alt 22235 6 + 163458 AAGGGA s panTro5.chr3 200141843 6 + 202621043 GAGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83308 6 - 190779 GAGAGA i panPan2.chrUn_NW_014024201v1 C 0 T 131 s gorGor5.CYUI01001831v1 4577 6 + 55620 AAGGGA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2304140 4 - 204787373 --GAGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112248 6 - 19675229 GAGAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344927 4 - 16847902 --GAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316104 4 + 91754291 --GAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368612 6 + 1977891 GAGAGA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796930 2 + 74750902 ----AA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249232 258 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7324026 128 - 7796314 T e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T a score=29274.000000 s hg38.chr3_KI270934v1_alt 22241 14 + 163458 GGGTGTCTACA-CCC- s panTro5.chr3 200141849 14 + 202621043 GGGTGTCTACA-CCC- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 4583 14 + 55620 GGGTGTCTACA-CCC- i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2304144 14 - 204787373 GGGTGTCTACA-GCC- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112254 14 - 19675229 GGGTGTCTACA-GCC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344931 15 - 16847902 GGATGTCTACACCCC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316108 14 + 91754291 GGGTGTCTATA-GCC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368618 14 + 1977891 GGGTGTCTACA-CCC- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73796932 13 + 74750902 --GAATCTCCA-CCCC i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249232 258 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7324026 128 - 7796314 T e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T e panPan2.chrUn_NW_014024201v1 83314 131 - 190779 T a score=18225.000000 s hg38.chr3_KI270934v1_alt 22255 6 + 163458 CTGAGC s panTro5.chr3 200141863 6 + 202621043 CTGAGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 4597 6 + 55620 CTGAGC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2304158 6 - 204787373 CTGAGT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112268 6 - 19675229 CTGAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344946 6 - 16847902 CTGAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316122 6 + 91754291 CTGAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368632 6 + 1977891 TTGAGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323898 6 - 7796314 CTGAGG i colAng1.NW_012118932v1 T 128 C 0 s calJac3.chr17 73796945 6 + 74750902 CCGAGA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249232 258 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T e panPan2.chrUn_NW_014024201v1 83314 131 - 190779 T a score=140379.000000 s hg38.chr3_KI270934v1_alt 22261 37 + 163458 GATGGAGAGAGGGTGTCTACACCCCTGAGCGATGGAG s panTro5.chr3 200141869 37 + 202621043 GATGGAGAGAGGGTGTCTATACCCCTGAGCGATGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83183 37 - 190779 GATGGAGATGGGGTGTCTGCACCCCTGATCGATGGAG i panPan2.chrUn_NW_014024201v1 T 131 C 0 s gorGor5.CYUI01001831v1 4603 35 + 55620 GATGGAGA--GGGTGTCTACACCCCTGAGAGACGGAG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2304164 37 - 204787373 GATGGAGAGAGGGTGTCTACACCCCTTAGTGATGGAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112274 37 - 19675229 GATGGAGAGAGGGTGTCTACACCCCTTAGTGATGGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16344952 37 - 16847902 TATGGAGAGAGGGTGTCTACAGCCCTGAGTGATGGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316128 35 + 91754291 GATGGAGAGAGGGTGTCTACACCGCTGAGTGATG--G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368638 37 + 1977891 GATGGAGAGAGGGTGTCTACACCCCTGAGTGATGGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323904 37 - 7796314 GATGGAGAGAGGGTGTCTACACCCCTGAGTGATGGAG i colAng1.NW_012118932v1 C 0 T 148 s calJac3.chr17 73796951 35 + 74750902 GATGGAGAGA-GATCTCCAC-CCCCTGAACAATGGAG i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249232 258 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T a score=158042.000000 s hg38.chr3_KI270934v1_alt 22298 44 + 163458 GGAGGGTGTCTACA-CCCCTGAGCGATGAAGGGAGGGTGTCTACA s panTro5.chr3 200141906 44 + 202621043 AGAGGGTGTCTACA-CCCCTGAGCGATGAAGGGAGGGTGTCTACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83220 44 - 190779 AGAGGGTGTCTGCA-CCCGTGAGCGATAGAGAGAGGGTGTCTACA i panPan2.chrUn_NW_014024201v1 C 0 T 13 s gorGor5.CYUI01001831v1 4638 44 + 55620 AGAGGGTGTCTACA-CCCCTGAGCGACGAAGGGAGGGTGTCCACA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2304201 42 - 204787373 AGAGGGTGTCTACA-CCGCTGAGTGATG--GAGAGGGTGTCTATA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112311 42 - 19675229 AGAGGGTGTCTACA-CCGCTGAGTGATG--GAGAGGGTGTCTATA i macNem1.NW_012014355v1 C 0 I 1 s cerAty1.NW_012004056v1 16344989 44 - 16847902 AGAGGGTGTCTACT-CCCCTTAGTGATGGAGAGAGGGTGTCTACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316163 44 + 91754291 AGAGGGTGTCTATA-GCCCTGAGTGATGGAGAGAGGGTGTCTACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368675 44 + 1977891 AGAGGGTGTCTACA-CCCCTGAGCGATGGAGAGAGGGTGTCTACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323793 44 - 7796314 AGAGGGTGTCTACA-CCCCCGAGGGATGGAGAGAGGGTGTCTACA i colAng1.NW_012118932v1 T 148 C 0 s calJac3.chr17 73796986 41 + 74750902 ---AGAAGTCTCCACCCCCTGAGCCATGGAAAGAGAG-ATCTCCA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249232 258 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T a score=28590.000000 s hg38.chr3_KI270934v1_alt 22342 9 + 163458 -CCCCTGAGC s panTro5.chr3 200141950 9 + 202621043 -CCCCTGAGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 4682 9 + 55620 -CCCCTGAGC i gorGor5.CYUI01001831v1 C 0 I 329 s rheMac8.chr2 2304243 9 - 204787373 -CCCCTGAGT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112354 9 - 19675229 -CCCCTGAGT i macNem1.NW_012014355v1 I 1 C 0 s cerAty1.NW_012004056v1 16345033 9 - 16847902 -CCGCTGAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316207 9 + 91754291 -CCGCTGAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368719 9 + 1977891 -GCCCTGAGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323837 9 - 7796314 -CCCCTTAGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797027 10 + 74750902 CCCCCTGAGC i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249232 258 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T e panPan2.chrUn_NW_014024201v1 83264 13 - 190779 T a score=21817.000000 s hg38.chr3_KI270934v1_alt 22351 8 + 163458 GATGAAGG s panTro5.chr3 200141959 8 + 202621043 GATGGAGA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 5020 8 + 55620 GATGGAGA i gorGor5.CYUI01001831v1 I 329 C 0 s rheMac8.chr2 2304252 8 - 204787373 AATGGAGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112363 8 - 19675229 TATGGAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345042 8 - 16847902 GATGGAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316216 6 + 91754291 GATG--GA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368728 8 + 1977891 GATGGAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323846 8 - 7796314 GATGGAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797037 8 + 74750902 CATGGAGA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249232 258 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T e panPan2.chrUn_NW_014024201v1 83264 13 - 190779 T a score=27325.000000 s hg38.chr3_KI270934v1_alt 22359 8 + 163458 GAGGGTGT s panTro5.chr3 200141967 8 + 202621043 GAGGGTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83251 8 - 190779 GAGGGTGT i panPan2.chrUn_NW_014024201v1 T 13 C 0 s gorGor5.CYUI01001831v1 5028 8 + 55620 GAGGGTGT i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2304260 8 - 204787373 GAGGGTGT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112371 8 - 19675229 GAGGGTGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345050 8 - 16847902 GAGGGTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316222 8 + 91754291 GAGGGTGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368736 8 + 1977891 GAGGGTGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323854 8 - 7796314 GACGTTGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797045 7 + 74750902 GAGAGAT- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249232 258 - 17725628 T e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T a score=111053.000000 s hg38.chr3_KI270934v1_alt 22367 27 + 163458 CTACACCCC----------TGAGCGATGGAGAGAGGG s panTro5.chr3 200141975 27 + 202621043 CTACACCCC----------TGAGCGATGGAGAGAGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83259 27 - 190779 CTACACCTC----------TGAGCGATGGAGAGAGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5036 27 + 55620 CTACACCCC----------TGAGCGATGGAGAGAGGG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2304268 27 - 204787373 CTACACCCC----------TGAGTGATGGAGAGAGGT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112379 27 - 19675229 CTACACCCC----------TTAGTGATGGAGAGAGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345058 27 - 16847902 CTACACCCC----------TTAGTGATGGAGAGAGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316230 27 + 91754291 GTACATCCC----------TGAGTGATGGAGATAGGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368744 27 + 1977891 CTACACCCC----------TTAGTGATGGAGAGAGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323862 27 - 7796314 CTACACTGC----------TGAGTGATGGAGACAGGG i colAng1.NW_012118932v1 C 0 I 52 s calJac3.chr17 73797052 28 + 74750902 CTCCACCCTC---------TGAGTGATGGAGAGAGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17248974 35 - 17725628 CTGCACCCCCACCAAGGGATGAGTCAT--AGAGAGAG i saiBol1.JH378146 T 258 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T a score=43015.000000 s hg38.chr3_KI270934v1_alt 22394 10 + 163458 TGTCTACACC s panTro5.chr3 200142002 10 + 202621043 TGTCTACACC i panTro5.chr3 C 0 T 4502 s panPan2.chrUn_NW_014024201v1 83286 10 - 190779 TGTCTACACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5063 10 + 55620 TGTCTACACC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2304295 10 - 204787373 TGTCTACACC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112406 10 - 19675229 TGTCTACACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345085 10 - 16847902 TGTCTACACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316257 10 + 91754291 TGTCTACACT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368771 10 + 1977891 TGTCTACACC i manLeu1.NW_012102020v1 C 0 T 152 s calJac3.chr17 73797080 9 + 74750902 -GTCTCCACC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249009 9 - 17725628 -CTCTCCACC i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323889 52 - 7796314 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T a score=-10390.000000 s hg38.chr3_KI270934v1_alt 22404 2 + 163458 -TG s panTro5.chr3 200137510 2 + 202621043 -TG i panTro5.chr3 T 4502 C 0 s panPan2.chrUn_NW_014024201v1 83296 2 - 190779 -TG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5073 2 + 55620 -TG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2304305 1 - 204787373 --G i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112416 1 - 19675229 --G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345095 1 - 16847902 --G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316267 2 + 91754291 -TG i chlSab2.chr15 C 0 I 26 s calJac3.chr17 73797089 2 + 74750902 CC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249018 2 - 17725628 CC- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323889 52 - 7796314 I e manLeu1.NW_012102020v1 1368781 152 + 1977891 T e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T a score=37636.000000 s hg38.chr3_KI270934v1_alt 22406 13 + 163458 CTGAGCAATAGAT s panTro5.chr3 200137512 13 + 202621043 CTGAGCAATAAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83298 13 - 190779 CTGAGCGATAGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5075 13 + 55620 CTGAGCAATAGAT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783426 13 - 123690457 CTCAGCGATGGAG i nomLeu3.chr11 T 9860 C 0 s rheMac8.chr2 2304306 13 - 204787373 CTGAGTGATGGAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112417 13 - 19675229 CTGAGTGATGGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345096 13 - 16847902 CTGAGTGATGGAG i cerAty1.NW_012004056v1 C 0 C 0 s calJac3.chr17 73797091 13 + 74750902 CTGAGCAATGGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249020 13 - 17725628 CTGAGCAAAGGAG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7323889 52 - 7796314 I e manLeu1.NW_012102020v1 1368781 152 + 1977891 T e chlSab2.chr15 91316269 26 + 91754291 I e macFas5.chr2 192362332 14732 - 192460366 M a score=26114.000000 s hg38.chr3_KI270934v1_alt 22419 12 + 163458 --AGAGGGTTCCAC s panTro5.chr3 200137525 12 + 202621043 --AGAGGTTTCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83311 12 - 190779 --AGAGGTTTCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5088 12 + 55620 --AGAGGGCTTCAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783439 12 - 123690457 --AGAGGTTTCCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2304319 12 - 204787373 --ACAGGGCTCCAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112430 12 - 19675229 --ACAGGGCTCCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345109 12 - 16847902 --ACAGGGCTCCAG i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 7323941 12 - 7796314 --AGAGGGCTCCAC i colAng1.NW_012118932v1 I 52 C 0 s calJac3.chr17 73797104 6 + 74750902 ACAGAG-------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249033 14 - 17725628 ACAGAGTTCTCTAC i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368781 152 + 1977891 T e chlSab2.chr15 91316269 26 + 91754291 I e macFas5.chr2 192362332 14732 - 192460366 M a score=148814.000000 s hg38.chr3_KI270934v1_alt 22431 39 + 163458 CCCCTAAGTGATGGAGATGGGGTGTCTGCACCC-CTGAGC s panTro5.chr3 200137537 39 + 202621043 CCCCTAAGTGATGGAGATGGGGTGTCTGCACCC-CTGAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83323 39 - 190779 CCCCTAAGTGATGGAGATGGGGTGTCTGCACCC-CTGAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5100 39 + 55620 CCCCTAAGTGATGGAGATGGGGTGTCTGCACCC-CTGAGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783451 39 - 123690457 CCCCTAAGTGATGGAGAGGGGGTGTCTACACCC-CTGAAC i nomLeu3.chr11 C 0 T 30 s rheMac8.chr2 2304331 39 - 204787373 CCACTGAGGGATGGAGATAGGCTGTCTACACTT-GTGACT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112442 39 - 19675229 CCACTGAGGGATGGAGATAGGCTGTCTACACTT-GTGACT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345121 39 - 16847902 CCACTGAGGGATGGAGATAGGCTGTCTACACTT-CTGACT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316295 37 + 91754291 CTCCTGATTGATG--GAGAGGGTGTCTACACTC-CTGAGT i chlSab2.chr15 I 26 C 0 s manLeu1.NW_012102020v1 1368629 39 + 1977891 CCCTTGAGTGATGGAGAGAGGGTGTCTACACCC-CTGAGT i manLeu1.NW_012102020v1 T 152 C 0 s colAng1.NW_012118932v1 7323953 39 - 7796314 CCCCTGAATGATGGAGATAGGCTGTCTACACTT-CTGACT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797110 17 + 74750902 -----------------------ATCTCCACCCCCTGAGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249047 37 - 17725628 CCCTTGAGAGATGGAGA---GACATCTCCACCCTCTGAGT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M a score=120219.000000 s hg38.chr3_KI270934v1_alt 22470 24 + 163458 GATGGAGAG----AGGGTGTCTACACCC s panTro5.chr3 200137576 24 + 202621043 GATGGAGAG----AGGGTGTCTACACCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83362 24 - 190779 GATGGAGAG----AGGGTGTCTACACCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5139 24 + 55620 GGTGGAGAG----AGGGTGTGTACGCCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783460 24 - 123690457 GATGGAGAG----GGGGTGTCTACACCC i nomLeu3.chr11 T 30 C 0 s rheMac8.chr2 2304370 24 - 204787373 GATGGAGAG----AGGGTGTCTACACTC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112481 24 - 19675229 GATGGAGAG----AGGGTGTCTACACTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345160 24 - 16847902 GATGGAGAG----AGGGTGTCTACACTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316332 22 + 91754291 GATG--GAG----AGGGTGTCTATACTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368668 24 + 1977891 GATGGAGAG----AGGGTGTCTACACCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7323992 21 - 7796314 GATGGAGAG----AGGGTGTCTACA--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797127 23 + 74750902 GATGGAGAG----AAGG-ATTTCCACCC i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 17249084 27 - 17725628 GATGGAGAGAGAAAGAG-ATCTCCACCC i saiBol1.JH378146 C 0 I 73 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e macFas5.chr2 192362332 14732 - 192460366 M a score=39947.000000 s hg38.chr3_KI270934v1_alt 22494 19 + 163458 CTGAGCGACGGAGGGAGG-G- s panTro5.chr3 200137600 19 + 202621043 CTGAGCGACGGAGGGAGA-G- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83386 19 - 190779 CTGAGCGATGGAGGGAGA-G- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5163 19 + 55620 CTGAGCGACGGAGGGAGG-G- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783484 19 - 123690457 CTGAACAACGGAGGGAGG-G- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2304394 18 - 204787373 CTGAGTGATGGAGAGCAG--- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112505 18 - 19675229 CTGAGTGATGGAGAGCAG--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345184 18 - 16847902 CTGAGTGATGGAGAGCAG--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316354 19 + 91754291 CTGAGTGATGGAGAGGGTG-- i chlSab2.chr15 C 0 I 1 s manLeu1.NW_012102020v1 1368692 19 + 1977891 CTGAGCGATGGAGAGAGGG-- i manLeu1.NW_012102020v1 C 0 I 180 s calJac3.chr17 73797151 19 + 74750902 ATGAGTGATGGTGAGAGA--T i calJac3.chr17 I 1 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e saiBol1.JH378146 17249111 73 - 17725628 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e colAng1.NW_012118932v1 7324013 0 - 7796314 C e macFas5.chr2 192362332 14732 - 192460366 M a score=6230.000000 s hg38.chr3_KI270934v1_alt 22513 10 + 163458 CTCCACCCAC- s panTro5.chr3 200137619 10 + 202621043 CTCCACCCAC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83405 10 - 190779 CTCCACCCAC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5182 10 + 55620 CTCCACCCAC- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783503 10 - 123690457 CTCCGCTCCC- i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91316374 9 + 91754291 CTACACTC-C- i chlSab2.chr15 I 1 C 0 s colAng1.NW_012118932v1 7324013 4 - 7796314 -----CTC-C- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797170 10 + 74750902 CTTCACCC-CA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e aotNan1.NW_018492867v1 12204 43 - 21398 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19112523 0 - 19675229 C e saiBol1.JH378146 17249111 73 - 17725628 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368711 180 + 1977891 I e cerAty1.NW_012004056v1 16345202 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2304412 0 - 204787373 C a score=14663.000000 s hg38.chr3_KI270934v1_alt 22523 7 + 163458 TGAGCGA s panTro5.chr3 200137629 7 + 202621043 TAAGCGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83415 7 - 190779 TAAGCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5192 7 + 55620 CGAGCGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2783513 7 - 123690457 TGAGTGA i nomLeu3.chr11 C 0 I 9766 s chlSab2.chr15 91316383 7 + 91754291 TGAGTGA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7324017 7 - 7796314 TGAGAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797180 7 + 74750902 TGACTGA i calJac3.chr17 C 0 C 0 s aotNan1.NW_018492867v1 12247 7 - 21398 TGAGTGA i aotNan1.NW_018492867v1 I 43 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19112523 0 - 19675229 C e saiBol1.JH378146 17249111 73 - 17725628 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368711 180 + 1977891 I e cerAty1.NW_012004056v1 16345202 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2304412 0 - 204787373 C a score=13429.000000 s hg38.chr3_KI270934v1_alt 22530 6 + 163458 TGGAGG s panTro5.chr3 200137636 6 + 202621043 CCGAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83422 6 - 190779 CCGAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5199 6 + 55620 TGGAGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793286 6 - 123690457 TGGAGG i nomLeu3.chr11 I 9766 C 0 s chlSab2.chr15 91316390 6 + 91754291 TGGAGA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7324024 6 - 7796314 TGGAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797187 6 + 74750902 TGGAGA i calJac3.chr17 C 0 C 0 s aotNan1.NW_018492867v1 12254 6 - 21398 TGGAGA i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19112523 0 - 19675229 C e saiBol1.JH378146 17249111 73 - 17725628 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368711 180 + 1977891 I e cerAty1.NW_012004056v1 16345202 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2304412 0 - 204787373 C a score=23420.000000 s hg38.chr3_KI270934v1_alt 22536 19 + 163458 GAGGGCTCCACCCCCTGAG s panTro5.chr3 200137642 19 + 202621043 GAGAGCTCCACCCCCTGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83428 19 - 190779 GAGAGCTCCACCCCCTGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5205 19 + 55620 GAGGGCTCCACCCACTGAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793292 19 - 123690457 GAGGGCTCCACTCCCTGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2304412 2 - 204787373 -----------------AG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112523 2 - 19675229 -----------------AG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345202 2 - 16847902 -----------------AG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316396 19 + 91754291 GGGTGTCTACACTCCTGAG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7324030 5 - 7796314 GCG--------------GG i colAng1.NW_012118932v1 C 0 I 2 s calJac3.chr17 73797193 18 + 74750902 GAGGTTTCTA-CCCCTGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249184 19 - 17725628 GAGGTTTCTACCCCCTGAG i saiBol1.JH378146 I 73 C 0 s aotNan1.NW_018492867v1 12260 19 - 21398 GAGGTTTCTACCCCCTGAG i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e otoGar3.GL873829 177005 0 + 608964 C e manLeu1.NW_012102020v1 1368711 180 + 1977891 I e macFas5.chr2 192362332 14732 - 192460366 M a score=1923.000000 s hg38.chr3_KI270934v1_alt 22555 6 + 163458 CGATGG s panTro5.chr3 200137661 6 + 202621043 CGATGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83447 6 - 190779 CGATGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5224 6 + 55620 CGATGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793311 6 - 123690457 TGATGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2304414 1 - 204787373 T----- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112525 1 - 19675229 T----- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345204 1 - 16847902 T----- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316415 6 + 91754291 TGATGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73797211 6 + 74750902 AAATGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249203 6 - 17725628 AGATGG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 12279 6 - 21398 AGATGG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 177005 6 + 608964 TGATGG i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e mm10.chr16 32759730 0 + 98207768 C e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e colAng1.NW_012118932v1 7324035 2 - 7796314 I e manLeu1.NW_012102020v1 1368711 180 + 1977891 I e macFas5.chr2 192362332 14732 - 192460366 M a score=5323.000000 s hg38.chr3_KI270934v1_alt 22561 3 + 163458 AGA s panTro5.chr3 200137667 3 + 202621043 AGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83453 3 - 190779 AGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5230 3 + 55620 AGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793317 3 - 123690457 AGG i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91316421 3 + 91754291 AGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73797217 3 + 74750902 GGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249209 3 - 17725628 GGA i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 12285 3 - 21398 GGA i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 177011 3 + 608964 GGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32759730 3 + 98207768 AAT i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19112526 0 - 19675229 C e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e canFam3.chr33 2294038 3 - 31377067 I e colAng1.NW_012118932v1 7324035 2 - 7796314 I e manLeu1.NW_012102020v1 1368711 180 + 1977891 I e cerAty1.NW_012004056v1 16345205 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2304415 0 - 204787373 C a score=18175.000000 s hg38.chr3_KI270934v1_alt 22564 5 + 163458 GAGGG- s panTro5.chr3 200137670 5 + 202621043 GAGGG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83456 5 - 190779 GAGGG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5233 5 + 55620 GAGGG- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793320 5 - 123690457 GAGGG- i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91316424 5 + 91754291 GCAGG- i chlSab2.chr15 C 0 I 2 s calJac3.chr17 73797220 5 + 74750902 GGGGG- i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 17249212 5 - 17725628 GGGGG- i saiBol1.JH378146 C 0 I 1 s aotNan1.NW_018492867v1 12288 5 - 21398 GGGGG- i aotNan1.NW_018492867v1 C 0 I 1 s otoGar3.GL873829 177014 5 + 608964 GAGGG- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32759733 5 + 98207768 GAGGA- i mm10.chr16 C 0 I 1 s canFam3.chr33 2294041 5 - 31377067 -AGGGG i canFam3.chr33 I 3 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macNem1.NW_012014355v1 19112526 0 - 19675229 C e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e colAng1.NW_012118932v1 7324035 2 - 7796314 I e manLeu1.NW_012102020v1 1368711 180 + 1977891 I e cerAty1.NW_012004056v1 16345205 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2304415 0 - 204787373 C a score=44602.000000 s hg38.chr3_KI270934v1_alt 22569 7 + 163458 TTCCACT s panTro5.chr3 200137675 7 + 202621043 TTCCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83461 7 - 190779 TTCCACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5238 7 + 55620 CTCCACC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793325 7 - 123690457 CTCCACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2304415 7 - 204787373 TTCCATC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112526 7 - 19675229 TTCCATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345205 7 - 16847902 TTCCACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316431 7 + 91754291 TTCCACC i chlSab2.chr15 I 2 C 0 s manLeu1.NW_012102020v1 1368891 7 + 1977891 TTCCACC i manLeu1.NW_012102020v1 I 180 C 0 s colAng1.NW_012118932v1 7324037 7 - 7796314 TTTCACC i colAng1.NW_012118932v1 I 2 C 0 s calJac3.chr17 73797226 7 + 74750902 CTCTACC i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17249218 7 - 17725628 CTCCACC i saiBol1.JH378146 I 1 C 0 s aotNan1.NW_018492867v1 12294 7 - 21398 CTCCACC i aotNan1.NW_018492867v1 I 1 C 0 s otoGar3.GL873829 177019 7 + 608964 TGGCAGT i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32759739 7 + 98207768 ATTGACC i mm10.chr16 I 1 C 0 s canFam3.chr33 2294046 7 - 31377067 AGCAATC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e cebCap1.NW_016107444v1 6336970 184 + 6778120 I e macFas5.chr2 192362332 14732 - 192460366 M a score=124709.000000 s hg38.chr3_KI270934v1_alt 22576 18 + 163458 CCCTGAGC----------------------------CCCACCTAA---T s panTro5.chr3 200137682 46 + 202621043 CCCTGAGCGATGGAAGGAGGGCTCCACCCCCTGAGCCCCACCTAA---T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83468 46 - 190779 CCCTGAGCGATGGAAGGAGGGCTCCACCCCCTGAGCCCCACCTAA---T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5245 18 + 55620 CCCTGAGC----------------------------CCCACCTAA---T i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793332 18 - 123690457 CCCTGAGC----------------------------CCCACCTAA---T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2304422 18 - 204787373 TCCTGAGC----------------------------CCCACATGA---T i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112533 18 - 19675229 TCCTGAGC----------------------------CCCACATGA---T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345212 18 - 16847902 TCCTGAGC----------------------------CCCACATGA---T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316438 18 + 91754291 TCCTGAGC----------------------------CCCACATGA---T i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368898 18 + 1977891 TCCTGAGC----------------------------CCCACATGA---T i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324044 18 - 7796314 TCCTGAGC----------------------------CCCACATGA---T i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797233 18 + 74750902 CCCTGAGC----------------------------CTCATCTGA---T i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249225 17 - 17725628 CTC-GAGC----------------------------ATCACCTGA---T i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6337154 18 + 6778120 CCCTGAGC----------------------------CTCACCTGA---T i cebCap1.NW_016107444v1 I 184 C 0 s aotNan1.NW_018492867v1 12301 18 - 21398 CCCTGAGC----------------------------CTCACTTGA---T i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 177027 22 + 608964 CCTTTAGCA---------------------------CACATCTGGAACT i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32759746 18 + 98207768 CCTTTACC----------------------------CTCATCTGA---T i mm10.chr16 C 0 C 0 s canFam3.chr33 2294053 18 - 31377067 CTCTTAGC----------------------------CCCATCTGA---T i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e micMur3.chr1 88356093 1133 + 114275543 I e dasNov3.JH569502 2669426 9 - 6579706 I e macFas5.chr2 192362332 14732 - 192460366 M a score=1958169.000000 s hg38.chr3_KI270934v1_alt 22594 260 + 163458 GTGTCGCAAACTTC--------AGGATGGGG----------CCCAGGGGACTGGCCAAGAGGGGTGTG-CCTGTGA-GGGGCTGGTCCACAGCCAGGGATCTG-CAGTGAAACAGG-ACCAAGC------------------------CTACCACCC----GAGGACGCA-------AGGGATGGCCTG--AGGGC--GGAGCA---T-TCTGTGAGAATA-TATGGAAAGGGCTCTCCC---C--AAAACAGGA--CACAG--GAGGTG-ACTT-CCAGGGGTTGTTAGCATCTCTA-------AAGCTCTA----------------CCC----------TTGGGGGTCACGCTTTTGAGGAGCTGGA s panTro5.chr3 200137728 260 + 202621043 GTGTCGCAAACTTC--------AGGATAGGG----------CCCAGGGGACTGGTCAAGAGGGGTGTG-CCTGTGA-GGGGCTGGTCCACAGCCAGGGATCTG-CAGTGAAACAGG-ACCAAAC------------------------CTACCACCC----GAGGACGCA-------AGGGATGGCCTG--AGGGC--GGAGCA---T-TCTGTGAGATTA-CATGGAAAGGGCTCTCCC---C--AAGCCAGGA--CACAG--GAGGTG-ACTT-CCAGGGGTTGTTAGCATGTCTA-------AAGCTCTA----------------CCC----------TTGGGGGTCACGCTTTTGAGGAGCTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83514 260 - 190779 GTGTCGCAAACTTC--------AGGATAGGG----------CCCAGGGGACTGGTCAAGAGGGGTGTG-CCTGTGA-GGGGCTGGTCCACAGCCAGGGATCTG-CAGTGAAACAGG-ACCAAAC------------------------CTACCACCC----GAGGACGCA-------AGGGATGGCCTG--AGGGC--GGAGCA---T-TCTGTGAGATTA-CATGGAAAGGGCTCTCCC---C--AAGCCAGGA--CACAG--GAGGTG-ACTT-CCAGGGGTTGTTAGCATGTCTA-------AAGCTCTA----------------CCC----------TTGGGGGTCACGCTTTTGAGGAGCTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5263 259 + 55620 GTGTCGCAAACTTC--------AGGATGGGG----------CCCAGGGGACTGGCCAAGAGGGGTGTG-CCTGTGA-GGGGCTGGTCCACAGCCAGGGATCTG-CAGTGAAACAGG-ACCAAGC------------------------CTACCACCC----GAGGA-GCA-------AGGGATGGCCTG--AGGGC--GGAGCA---T-TCTGTGAGATTA-CATGGAAAGGGCTCTCCC---C--ACGCCAGGA--CACAG--GAGGTG-ACTT-CCAGGGGTTGTTAGCATCTCTA-------AAGCTCTA----------------CCC----------TTGGGGGTCACGCTTTTGAGGAGCTGGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793350 247 - 123690457 GTGTCACAAACTTC--------AGGATGGGG----------CCCAGGGCACTGGCCAAGAGGGGTGTG-CCTGTGA-GGGGCTGGTCCACAGCCAGGGATCTG-CAGTGAAACAGG-ACCAAGC------------------------CTACCACCC-------GACGCA-------AGGGATGGCCTG--AGGGG--GGAGCA---C-TCTGTGAGATTA-TATGGAAAGGGCTCTCCC---C--AAGCCAGGA--CACAG--GAGGTG-ACTT-CCAGGG---GTTAGCATCTCTA-------AAGCTCTA----------------CCC-----------------TCACGCTTCTGAGGAGCTGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2304440 260 - 204787373 GTGTCACAAGCTTC--------AGGATGGGG----------CCCAGGGGACTGGCCAAGAGGGATGTG-TCTGTGA-TTGGCTGGTCCACAGCCGGGGATCTG-CAGTGAAACAGG-ACCAAGC------------------------CGACCACCC----AAGGACCCA-------AGGGATGCCTTA--AGGGT--GGAGTA---T-TCTGTGAGATTA-TACGGAAAGGGCTCTCCC---A--AAGCCAGGA--CACAG--GAGGTG-ACTT-CCCGGGGTTGTTAGCACCTCTA-------AAGCTCTA----------------CCC----------TCGGGGGTCACGCTTCTGTGGAGCTGGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112551 260 - 19675229 GTGTCACAGGCTTC--------AGGATGGGG----------CCCAGGGGACTGGCCAAGAGGGATGTG-TCTGTGA-TTGGCTGGTCCACAGCCGGGGATCTG-CAGTGAAACAGG-ACCAAGC------------------------CGACCACCC----AAGGACCCA-------AGGGATGCCTTA--AGGGT--GGAGTA---T-TCTGTGAGATTA-TACGGAAAGGGCTCTCCC---G--AAGCCAGGA--CACAG--GAGGTG-ACTT-CCCGGGGTTGTTAGCACCTCTA-------AAGCTCTA----------------CCC----------TTGGGGGTCACGCTTCTGTGGAGCTGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345230 260 - 16847902 GTGTCACAAGCTTC--------AGGATGGGG----------CCCAGGGGACTGGCCCAGAGGGATGTG-TCTGTGA-TTGGCTGGTCCACAGCCGGGGATCTG-CAGTGAAACAGG-ACCAAGC------------------------CGACCACCC----AAGGACCCA-------AGGGATGCCTTA--AGGGT--GGAGTA---T-TCTGTGAGATTA-TACGGAAAGGGCTCTCCC---G--AAGCCAGGA--CACAG--GAGGTG-ACTT-CCCGGGGTTGTTAGCACCTCTA-------AAGCTCTA----------------CCC----------TTGGGGGTCACGCTTCTGTGGAGCTGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316456 260 + 91754291 GTGTCACAAGCTTC--------AGGATGGGG----------CCCAGGGGACTGGCCAAGAGGGATGTG-TCTGTGA-TTGGCTGGTCCACAGCCGGGGATCTG-CAGTGAAACAGG-ACCAAGC------------------------CGACCACCC----AAGGACCCA-------AGGGATGCCTTA--AGGGT--GGAGTA---T-TCTGTGAGATTA-TATGGAAAGGGCTCTCCC---G--AAGCCAGGA--CACAG--GAGGTG-ACTT-CCCGGGGTTGTTAGCACCTCTA-------AAGCTCTA----------------CCC----------TTGGGGATCACGCTTCTGTGGAGCTGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1368916 260 + 1977891 GTGTCACAAGCTTC--------AGGATGGGG----------CCCAGGGGACTGGCCAAGAGGGATGTG-TCTGTGA-TTGGCTGGTCTACAGCCGGGGATCTG-CAGTGAAACAGG-ACCAAGC------------------------CGACCACCC----AAGGACCCA-------AGGGATGCCTTA--AGGGT--GGAGTA---T-TCTGTGAGATTA-TACGGAAAGGGCTCTCCC---G--AAGCCAGGA--CACAG--GAGGTG-ACTT-CCCGGGGTTGTTAGCACCTCTA-------AAGCTCTA----------------CCC----------TTGGGGGTCACGCTTCTGTGGAGCTGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324062 284 - 7796314 GTGTCACAGGCTTC--------AGGATGGGG----------CCCAGGGGACTGGCAAAGAGGGGTGTG-TCTGTGA-CTGGCTGGTCCACAGCCGGGGGTCTG-CAGTGAAACAGG-Accaagcctaccacccaagctaccacccaagctaccaccc----aagGACCCA-------AGGGACGCCTTA--AGGGT--GGAGCA---T-TCTGTGAGATTA-TACGGAAAGGGCTCTCCC---G--AAGCCAGGA--CACAG--GAGGTG-ACTT-CCCGGGGTTGTGAGCACCTCTA-------AAGCTCTA----------------CCC----------CTGGGGGTCACGCTTCTGTGGAGCTGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797251 244 + 74750902 GTGTCACAAGCTTC--------AGGATGGGG----------CCCAGAGGACTGGCCAAGAGAGGTGTG-CCTGTGAGGGGGCTGGTCCACAGCCAGGGGTCTG-TACTGAAGCAGG-ACCAAGC------------------------CTACCACCT----GAGGACCCA-------AGGGATGGCC--------------------------------CA-TACGGAAAGGTCTCTCCT---G--AAATCAGGA--CATAG--GAGATG-ACTT-CCAGGGGTTGT--TAGTCTCTA-------AAGCTCCA----------------CCCAGAGAGGCCCCTGGGGGTCG-GCTTCTGAGGAGCTGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249242 237 - 17725628 GTGTCACAAGCTTC--------AGGATGAGG----------CCCAGAGGACTGGCCAAGAGAGGTGTG-CCTGTGA-GGGGCTGGTCCACA-CCAGGGGTCTG-CACTGAAACAGG-ACCAAGC------------------------CCATCACCT----GAGGACCCA-------AGGGACGACC--------------------------------CA-TTCGGAAAGGTCTCTCCC---G--AAGTCAGGA--CATAG--GACATG-ACTT--CAGGGGTTGTTATAGTCCCTA-------ACGCTCTA----------------CCCAGAGAGGCCCCTGGGGGTCG-GCTTCTGAGGA------ i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6337172 244 + 6778120 GTGTCACAAGCTTC--------AGGATGGGG----------CCCAGAGGACCGGCCAAGAGAGGTGTG-CCTGTGA-GGGGCTGGTGCACAGCCAGGGGTCTG-CACCGAAGCAGG-ACCAAGC------------------------CCACCGCCT----GAGGACCCA-------AGGGATGGCC--------------------------------CA-TACGGAAAGGTCTCTCCC---G--AAGTCAGGA---ATAG--GACATG-ACTT-CCAGGGGTTGTTAGCGTCTCTA-------AAGCTCCA----------------CCCAGAGAGGCCCCTGGGGGTCG-GCTTCTGAGGAGCTGGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 12319 245 - 21398 GTGTCACAAGCTTC--------AGGATGGGG----------CCCAGAGGACTGGCCAAGAGAGCTGTG-CCTATGA-GGGGCTGGTCCACAGCCAGGGGTCTG-CACTGAAGCAGG-ACCAGGC------------------------CCACCGCCT----GAGGACCCA-------AGGGATGGCC--------------------------------CA-TACGGAAAGGTCTCTCCC---G--AAGTCAGGA--CATAG--GACATG-GCTT-CCAGGGGTTGTTAGCGTCTCTA-------AAGCTCCA----------------CCCAGAGAGGCCCCTGGGGGTCA-GCTTCTGAGGAGCTGGG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 177049 316 + 608964 GTGTCACAAGCTACCCTCTACAAGGGTAGAGACACCTTGTCCACAGGTTGGGGGTGGGGCAGGATGTGCCCTGTGA-AGTACTGCTCTATGGCCAGGGATATACCACTGATGGGTG-ACAAAAG------------------------CCA-CACCT----TACGACCAC-------AGGAATGGCCTG--AGGAT--GAAGAATGTT-TTTATGAGATTACTACCTAAAATATACTCCC--AG--ACATCAGTA--TATGGATGAGATGAACTT-ACGGGGGGCATTGACATCTCTGTTAGGCTAGGCACTGGAAATAGAGGAATGATCCCAAAGAGGACCTTGGG----ACACTTCTGAGAAGCCCAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32759764 256 + 98207768 ATGTCACAAGCTTC--------AAGAAAGGG-----------TGAAACACTTTACCAAGAAGGCTTTG--CTCTGA-GGCA---------AGCCTGGA---TG-CAG----GCCGA-ACACCGC------------------------CCACTATTT-----TGGACTGA----TGTGGGAATGTCCTGATAGGGA--TGAGTA-----TTTGTGAGGTTGCTAAGTTTTGAGTTCTCCT---GGAAGGCTAAAAAGTGCAC--AAGGGG-GCCG-TCAAGG----TTGATACCTCAA-------ACCCTCTG----------------CACAGATGGGCTTTTAAGGGGAGCTCTTCCGAGGAACTGGT i mm10.chr16 C 0 C 0 s canFam3.chr33 2294071 283 - 31377067 GCTGCTGGGACTTC--------AGGAAGGCT----------CCGTGGGGATCCACCCAGAGGGCTCCGCCCCGCGC-TGGGGCCGGCTATGGATGGGGTTGGC-CGCCGAGGCAGG-GCAAAAC------------------------CTACCTTGTCAGGAAGGACTTAAA-ACAGAGGAGTGTCCTG--CAGGT--GAAGAG---CATCTGTGTGAGGA-CTAAGCAAGGTGGCCCAG---C--AGGCGGGGA--CGAAT--GGGACG-ACCTGGCAGTGGTTGTTGACATCCCTA-------AAGTTCCA----------------CCCAGAGAGGTCCTTGGGGATCACACTTCTGAGGAACCGGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2669435 281 - 6579706 GTGGTACAAACTTC--------AAGATGAAA----------CCCAGAGCATTTACCAA-AGGGCTG-G-TCTGCTG-TAGTCTGG--------CAGGGGCGGG-GCGGGAGGCAGGAACAAAAC------------------------GTAGGACCTTGGAAAGGAATTGGGTGGTGAGGAATGTCATG--AGGGTGAGAAGTA---TTTGTGTCAGATCACTATGCAAAGGGCTCCACCTAAG--AGGCAGGGA--GGTGGATGAGATG-GCCTCCCAGGGGTCACTGGCATCTCTG-------ATGTTCTA----------------CCCTGGGAGGCC-CTTGGGGCCACACTTCTAAGGAGCAGAC i dasNov3.JH569502 I 9 C 0 e proCoq1.NW_012133858v1 14767259 366 - 22200726 I e micMur3.chr1 88356093 1133 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M a score=579559.000000 s hg38.chr3_KI270934v1_alt 22854 58 + 163458 CCAAGGCTGGGAC-TTTCCTCCCCA------------CTTCCCTCCCTGAATGCTGACCACAAAACCCATG s panTro5.chr3 200137988 58 + 202621043 CCAAGGCTGGGAC-TTTCCTCCCCA------------CTTCCCTCCCTGAATGCTGACCACAAAACCCATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83774 58 - 190779 CCAAGGCTGGGAC-TTTCCTCCCCA------------CTTCCCTCCCTGAATGCTGACCACAAAACCCATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5522 58 + 55620 CCAAGGCTGGGAC-TTTCCTCCCCA------------CTTCCCTCCCTGAATGCTGACCACAAAACCCATG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793597 58 - 123690457 CCAAGGCTGGGAC-TTTCCTCCCCA------------CTTCCCTCCCTGAATGCTGACCACAAAACCCGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2304700 58 - 204787373 CCAAGGCTGGGAC-TTTCCTCCCCA------------CCTTCCTCCCTGAATGGTAACCACAAAACCTGTG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112811 58 - 19675229 CCAAGGCTGGGAC-TTTCCTCCCCA------------CCTTCCTCCCTGAATGGTAACCACAAAACCTGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345490 58 - 16847902 CCAAGGCTGGGAC-TTTCCTCCCCA------------CCTTCCTCCCTGAATGGTAACCACAAAACCTGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316716 58 + 91754291 CCAAGGCTGGGAC-TTTCCTCCCCA------------CCTTCCTCCTTGAATGGTAACCACAAAACCTGTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369176 58 + 1977891 CCAAGGCTGGGAC-TTTCCTCCCCA------------CCTTCCTCCCTGAATGGTAACCACAAAACCTGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324346 58 - 7796314 TCAAGGCTGGGAC-TTTCCTCCCCA------------CCTTCCTCCCTGAATGGTAACCACAAAACCCGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797495 58 + 74750902 CCAAGGCTGGGGCGTTTCCTCCCCA------------CCTCCCTCCCTGAATGCTCA-CACAAAACCCTTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249479 46 - 17725628 ------------CGTTTCCTTCCCA------------CCTCCCTCCCTGAATGCTCT-CACAAAACCCTTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6337416 58 + 6778120 CCAAGGCTGGGCCGTTTCCTCCCCA------------CCTCCTTCCCTGAATGCTCA-CACAAAACCCTTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 12564 58 - 21398 CCGAGGCTGGGCCATTTCCTCCCCA------------CCTCCCTCCCTGAACGCTCA-CACAAAACCCTTG i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 14767625 52 - 22200726 CCAAGGCTGGGACGTCTCCTCCCCA------------CCTCTCTCC-------CTGAATGCTAAAACCCTG i proCoq1.NW_012133858v1 I 366 C 0 s otoGar3.GL873829 177365 56 + 608964 CCTAGGCCGGGACATTCCCTCCCCT------------CTCCACCCCC--AGTGCTAACTATGAAAACCTT- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32760020 50 + 98207768 CCTAGACTAGGAT-AACCCTTCCCT------------CATCCCTCCCTAA--------CCAAGAACCCTTG i mm10.chr16 C 0 C 0 s canFam3.chr33 2294354 71 - 31377067 CCACGCCTGGGACGTtctctccctgcctcccccgctccctccctccctGGACACTAACCAGAACTTCTGTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2669716 57 - 6579706 CCATGGCTGGGAAATTCCTTCCCTG------------CCTCCCTCCCTGAATACTAA-CA-AGAACCCTTG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88356093 1133 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M a score=3228439.000000 s hg38.chr3_KI270934v1_alt 22912 196 + 163458 TGCTCAGTTCACAGACAATGGCCAGATCATCTTCCCAGAGTCAGACTACCAGATTTTCTCCTACCCCAACCCACTCCCAACAGGCTTCACAGGCCGGGACCCTGTGGCCCTGGTGGCTCCGTTCTGGGACGATGCTGACTTCTCCACTGGTCGGGGGACCACATTTTATCAGGTGAGCCTTTCAAAGCC-TGGCAGT s panTro5.chr3 200138046 196 + 202621043 TGCTCAGTTCACAGACAATGGCCAGATCATCTTCCCAGAGTCAGACTACCAGATTTTCTCCTACCCCAACCCACTCCCAACAGGCTTCACAGGCCAGGACCCTGTGGCCCTGGTGGCTCCATTCTGGGACGATGCTGACTTCTCCACTGGTCGGGGGACCACATTTTATCAGGTGAGCCTTTCAAAGCC-TGGCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83832 196 - 190779 TGCTCAGTTCACAGACAATGGCCAGATCATCTTCCCAGAGTCAGACTACCAGATTTTCTCCTACCCCAACCCACTCCCAACAGGCTTCACAGGCCAGGACCCTGTGGCCCTGGTGGCTCCATTCTGGGACGATGCTGACTTCTCCACTGGTCGGGGGACCACATTTTATCAGGTGAGCCTTTCAAAGCC-TGGCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5580 196 + 55620 TGCTCAGTTCACAGACAATGGCCAGATCATCTTCCCAGAGTCAGACTACCAGATTTTCTCCTACCCCAACCCACTCCCAACAGGCTTCACAGGCCGGGACCCTGTGGCCCTGGTGGCTCCGTTCTGGGACGATGCTGACTTCTCCACTGGTCGGGGGACCACATTTTATCAGGTGAGCCTTTCAAAGCC-TGGCAGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793655 196 - 123690457 TGCTCATTTCACAGACAATGGCCAGATCATCTTCCCAGAGTCAGACTACCAGATTTTCTCCTACCCCAACCCACTGCGAACAGGCTTCACAGGCTGGGACCCTGTGGCCCTGGTGGCTCCGTTCTGGGACGATGCTGACTTCTCCACTGGTCGGGGGACCACATTTTATCAGGTGAGCCTTTCAAAGCC-TGGCAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2304758 196 - 204787373 TGCTTAGTTCACAGACAATGGCCAGATCATCTTCCCAGAGTCAGACTACCAGATTTTCTCCTATCCCAACCCACTCCCAACAGGCTTCACAGGCTGGGACCCTGTGGCCCTGGTGGCTCCGTTCTGGGACGATGCTGACTTCTCCACTGGTCAGGGGACCATATTTTATCAGGTGAGCCTTTCAAAGCC-TGGCGGT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19112869 196 - 19675229 TGCTTAGTTCACAGACAATGGCCAGATCATCTTCCCAGAGTCAGACTACCAGATGTTCTCCTATCCCAACCCACTCCCAACAGGCTTCACAGGCTGGGACCCTGTGGCCCTGGTGGCTCCGTTCTGGGATGATGCTGACTTCTCCACTGGTCAGGGGACCATATTTTATCAGGTGAGCCTTTCAAAGCC-TGGCGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345548 196 - 16847902 TGCTTAGTTCACAGACAATGGCCAGATCATCTTCCCAGAGTCAGACTACCAGATGTTCTCCTATCCCAACCCACTCCCAACAGGCTTCACAGGCTGGGACCCTGTGGCCCTGGTGGCTCCGTTCTGGGACGATGCTGACTTCTCCACTGGTCAGGGGACCATATTTTATCAGGTGAGCCTGTCAAAGCC-TGGCAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316774 196 + 91754291 TGCTTAGTTCACAGACAATGGCCAGATCATCTTCCCACAGTCAGACTACCAGATTTTCTCCTATCCCAACCCACTCCCAAGAGGCTTCACAGGCTGGGACCCTGTGGCCCTGGTGGCTCCGTTCTGGGACGATGCTGACTTCTCCACTGGTCAGGGGACCATATTTTATCAGGTGAGCCTTTCAAAGCC-TGGCAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369234 196 + 1977891 TGCTTAGTTCACAGACAATGGCCAGATCATCTTCCCAGAGTCAGACTACCAGATGTTCTCCTATCCCAACCCACTCCCAACAGGCTTCACAGGCTGGGACCCTGTGGCCCTGGTGGCTCCGTTCTGGGACGATGCTGACTTCTCCACTGGTCAGGGGACCATATTTTATCAGGTGAGCCTGTCAAAGCC-TGGCAGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324404 196 - 7796314 TGCTTAGTTCACAGACAATGGCCAGATCATCTTCCCAGAGTCAGACTACCAGATTTTCTCCTATCCCAACCCACTCCCAACAGGCTTCACAGGCTGGGACCCTGTGGCCCTGGTGGCTCCGTTCTGGGACGATGCTGACTTCTCCACTGGTCAGGGGACCATATTTTATCAGGTGAGCCTTTCAAAGCC-TGGCAGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797553 196 + 74750902 TGCTCAGTTCACAGACAACGGCCAGATCATCTTCCCAGAGTCAGACTACCAGATTTTCTCCTACCCAAACCCGCTCCCAACAGGCTTCACAGGCTGGGAGACTGTGGCCCTGGTGGCTCCGTTCTGGGATGATGCTGATTTCTCCGACGGTCGAGGGACCGTATTTTACCGGGTGAGCCTCTCAAAGCC-TGGCAGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249525 196 - 17725628 TGCTCAGTTCACAGACAACGGCCAGATCATCTTCCCAGAGTCAGACTACCAGATTTTCTCCTACCCAAACCCGCTCCCAACAGGCTTCACAGGCTGGGACCCTGTGGCCCTGGTGGCCCCGTTCTGGGATGATGCTGATTTCTCCAATGGTCAGGGGACCATATTTTACCGGGTGAGCCTTTCAAAGCC-TGGCAGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6337474 196 + 6778120 TGCTCAGTTCACAGACAACGGCCAGATCATCTTCCCAGAGTCAGACTACCAGATTTTCTCGTACCCAAACCCGCTCCCAACAGGCTTCACAGGCTGGGACCCTGTGGCCCTGGTGGCTCCGTTCTGGGATGATGCCGATTTCTCCGGTGGTCGGGGGACCATATTTTACCGGGTGAGCCTTTCGAAGCC-TGGCAGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 12622 196 - 21398 TGCTCAGTTCACAGACAACGGCCAGATCATCTTCCCAGAGTCAGACGACCAGATTTTCTCCTACCCAAACCCGCTCCCGACAGGCTTCGCGGGCTGGGACCCTGTGGCCCTGGTGGCTCCGTTCTGGGATGATGCTGATTTCTCCCATGGTCGGGGGACCATATTTTACCGGGTGAGCCTTTCAAAGCC-TGGCAAT i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88357226 196 + 114275543 TGCTCAGTTCACAGATAATGGCCAGATCATTTTCCCAGACTCAGACTACCAGATTTTCTCCTACCCCCACCCACTCCAAAGACGCTTCACAGGCTGGGAACTTGTGGCCCTGGTGGCTCCGTTTTGGGACGATGCTGACTTCTCCAGCGGCTGGGGAACCACATATTACCAGGTGAGCCTTTCACAGCC-TGGCAGT i micMur3.chr1 I 1133 I 175 s proCoq1.NW_012133858v1 14767677 196 - 22200726 TGCTCAGTTCACAGATAATGGCCAGATCATTTTCCCAGACTCAGACTACCAGATTTTCTCCTACCCCCACCCACTCCAAAGACGCTTCACGGGCTGGGACCCTGTGGCCCTGGTGGCTCCGTTCTGGGATGATGCTGACTTCTCCAGCGGCTGGGGAACCACATATTACCAGGTGAGCCTTTCACAGCC-TGGCAGT i proCoq1.NW_012133858v1 C 0 I 153 s otoGar3.GL873829 177421 186 + 608964 TATACAGTTCACGGATAATGGCCAGATTGTTTTCCCGGAGTCAGACTACCAGATTTTCTCCTACCCCTACCCACCCCTAAGAGGCTTCACAGGCCAGGACCCTGTGGCTCTGGTGGCTCCGTTCTGGGATGATGCTGATTTCTCTAGCAGCCGGGGAACCACATTTTACCAGGTGAGCCTTTCAAA----------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32760070 197 + 98207768 TGCTCAGGTTACAGATAATGGTCAGATCATTTTCCCAGAGTCAGACTATGACGTCTTCTCCTACCCCAACCCACCTCAAAGAGGCTTCACCGGAAGGGAGCGCGTGGCCATGGTGGCCCCGTTCTGGGCTGATGCTGATTTCTCTAGCTCCAGGGGAGCCATATTTTACCAGGTGAGTCATTCAAGTCCTTGGCAGT i mm10.chr16 C 0 C 0 s canFam3.chr33 2294425 196 - 31377067 TTCCCAGTTCACAGATAATGGCCAGATCATTTTCCCGGAGTCAGAGTACCAGATTTTCTCCTACCCCAATCCTCCCCTTAGAGGCTTCACAGGCAGGGACCCTGTGGCCATGGTGGCTCCATTCTGGGACGATGCTGATTTTTCCAGTGGCCAGGGGACCATATTTTACCAGGTGAGCCTTTCAAAGTC-CAGCATT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2669773 196 - 6579706 TTCTCAGTTCACAGATAATGGCCAGATCATTTTTCCTGAATCAGACAACAAGATTTTCTCCTACCCCAACCCACCCTTTAGACAGTTCACGCACTGGGACCCTGTGGCCCTGGTGGCTCCATTTTGGGATGATGCTGATTTCTCCAGCCATCAAGGAACCATATTTTACCAGGTGGGCTTTTCAAAGCC-TGGCTTT i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M a score=481417.000000 s hg38.chr3_KI270934v1_alt 23108 49 + 163458 CAGGATCCCCCAGCAGCTGGCAGGG-GAGACAAAGAGCTGTGTGGAAGGC s panTro5.chr3 200138242 49 + 202621043 CAGGATCCCCCAGCAGCTGGCAAGG-GAGACAAAGAGCTGTGTGGAAGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84028 49 - 190779 CAGGATCCCCCAGCAGCTGGCAAGG-GAGACAAAGAGCTGTGTGGAAGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5776 49 + 55620 CAGGATCCCCCAGCAGCTGGCAGGG-GAGACAAAGAGCTGTGTGGAAGGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793851 49 - 123690457 CAGGATCCCCCAGTAGCTGGCAGGG-GAGACAAAGAGTTGTGTGGAAGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2304954 49 - 204787373 CAGGATCCCGCAGCAGCTGGCAGAG-GAGAAAAAGAGCTGTGTGGAAGGC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113065 49 - 19675229 CAGGATCCCGCAGCAGCTGGCAGAG-GAGAAAAAGAGCTGTGTGGAAGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345744 42 - 16847902 CAGGATCCCGCA-------GCAGGG-GAGAAACAGAGCTGTGTGGAAGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316970 42 + 91754291 CAGGATCCCGCA-------GCAGGG-GAGAAAAAGAGCTGTGTGGAAGGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369430 42 + 1977891 CAGGATCCCGCA-------GCAGAG-GAGAAAAAGAACTGTGTGGAAGGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324600 49 - 7796314 CAGGATCCCTTAGCAGCTGGCAGGG-GAGACAAAGAGCTGTGTGGAAGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797749 49 + 74750902 CAGGATCCCCCAGCAGCTGGCAGGG-GAGGCAAAGAGCTGTGTGGAAGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249721 49 - 17725628 CAGGATCCCCCAGCAGCTGGCAGGG-GAGGCAAAGAGCTGTGTGGAAGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6337670 49 + 6778120 CAGGATCCCCCGGCAGCTGGCAGGG-AAGGCAAAGAGCTGTGTGGAAGGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 12818 49 - 21398 CAGGATCCCCCAGCAGCTGGCAGGG-GAGGCAAAGAGCTGTGTGGAAGGC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 177607 30 + 608964 -------------------GCAGGA-GAGACAAAGGCCTATGTGGAGGGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32760267 49 + 98207768 CAGTAACTCCCAGCATCCTGCCTGG-AGGGATCAAGGTCATGTCAAGAGC i mm10.chr16 C 0 C 0 s canFam3.chr33 2294621 46 - 31377067 CAGGATCTCCCAGCAGCCAGCAAGGAGAGACAAAG----GTGTGAACGTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2669969 49 - 6579706 CGGAATCTCCAAGCATCAGCAAGGA-GAGACAGAAGTCTAGGTGGAGGAC i dasNov3.JH569502 C 0 I 365 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e micMur3.chr1 88357422 175 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M a score=739135.000000 s hg38.chr3_KI270934v1_alt 23157 89 + 163458 TTTGCCAGAGTTGCTGCTGTGACAGC-------CCCTGCA--------------GCAGGGG-----ACTGAGGCTTAAATATGGGTGT-GGGAGGAAGCAGTCAAGGGACATTAAG s panTro5.chr3 200138291 89 + 202621043 ATTGCCATAGTTGCTGCTGTGACAGC-------CCCTGCA--------------GCAGGGG-----ACTGAGGCTTAAATATGGGTGT-GGGAGGAAGCAGTCAAGGGACATTAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84077 89 - 190779 ATTGCCATAGTTGCTGCTGTGACAGC-------CCCTGCA--------------GCAGGGG-----ACTGAGGCTTAAATATGGGTGT-GGGAGGAAGCAGTCAAGGGACATTAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5825 89 + 55620 ATTGCCAGAGTTGCTGCTGTGACAGC-------CCCTGCA--------------GCAGGGG-----ACTGAGGCTTAAATATGGGTGT-GGGAGGAAGCAGTCAAGGGACATTAAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793900 89 - 123690457 ATTGCCAGAGTTGCTGCTGTGACAGC-------CCCTGCA--------------GCAGGGG-----ACTGAGGCTTAAATATGGGTGT-GGGAGGAACCAGGCAAGGGACATTAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305003 89 - 204787373 ATTGCCAGAGTCGCTGCTGTGACAGC-------CCCTGCA--------------GCAGGGG-----ACTGAGGCTTAAATATGGGTGT-GGGAGGAAGCTGGCAAGGGATATTAAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113114 89 - 19675229 ATTGCCAGAGTCGCTGCTGTGACAGC-------CCCTGCA--------------GCAGGGG-----ACTGAGGCTTAAATATGGGTGT-GGGAGGAAGCTGGCAAGGGATATTAAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345786 89 - 16847902 ATTGCCAGAGTCGCTGCTGTGACAGC-------CCCTGCA--------------GCAGGGG-----ACTGAGGCTTAAATATGGGTGT-GGGAGGAAGCTGGCAAGGGATATTAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91317012 89 + 91754291 ATTGCCAGAGTCGCTGCTGTGACAGC-------CCCTGCA--------------GCAGGGG-----ACTGAGGCTTAAATATGGGTAT-GGGAGGAAGCTGTCAAGGGATATTAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369472 88 + 1977891 ATTGCCAGAGTCGCTGCTGTGACA-C-------CCCTGCA--------------GCAGGGG-----ACTGAGGCTTAAATATGGGTGT-GGGAGGAAGCTGGCAAGGGATATTAAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324649 88 - 7796314 ATTGCCAGAGTCGCTGCTGTGACAGC-------CCGTGCA--------------GCAGGGG-----ACTGCGGC-TAAATACGGGTGT-GGGAGGAAGCTGGCAAGGGATATTAAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797798 75 + 74750902 TTTGTCAGAGTTACTGCTGCCACAGCCAG----------------------------------------GAGGCTTAAATATGGCTGT-GGAAGGAAGCAGGCAAGGGATATCAAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249770 96 - 17725628 ATTGCCAGAGTTACTGCTGCCACAGCCAGGGC-CCCTGCA-------------GGCAGAGG-----ACTGAGGCTTAAATATGGGTGT-GGAAGGAGGCAGGCAAGGGATATTAAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6337719 96 + 6778120 ATTGCCAGAGTTACTGCTGCCACCGCCAGGGC-CCCTGCC-------------GGCAGGGG-----ACTGAGGCTTAAATACGTGTGT-GGAAGGAAGCAGGCAAGGGATATTAAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 12867 91 - 21398 ATTGCCAGAGTTACAGCTGCCACAGCCAGGG--CCCTGCA-------------GGCAGGGG-----ACTGAGGCTTAAATGTGGGTGT-GGAAGGAA----GCAAGGGATATTAAG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 177637 95 + 608964 ATGGCAGATGGTATGGCTGTCAGAGC-------CCAGGCT--------------GCAGGGGCTGGAATTGAGGCTTAGACACAGGGGTGGGGAGGGAGCAGAGAATGCATATCAGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32760316 96 + 98207768 AC-ATCAAGGTCATTGT------ATC-------CCATGGAATGTGATTTTCATGGAAAGGG-----ACTGAAGTTTAAATACAGGGTG-CAGAGGGAGCTGAGGAAGAATGCTAAA i mm10.chr16 C 0 C 0 s canFam3.chr33 2294667 95 - 31377067 G--GCAAGCGTGACTGCTGTCAGAGCCTGGGCTCCCTGTG--------------GGCAGAG-----AGTGATGTTTAAATATGAGGGTGGGGAGGAAACAGAGCAGGGCTGTTACA i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macFas5.chr2 192362332 14732 - 192460366 M a score=46705.000000 s hg38.chr3_KI270934v1_alt 23246 6 + 163458 CTGACT s panTro5.chr3 200138380 6 + 202621043 CTGACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84166 6 - 190779 CTGACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5914 6 + 55620 CTGACT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793989 6 - 123690457 CTGACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305092 6 - 204787373 CTGACT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113203 6 - 19675229 CTGACT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345875 6 - 16847902 CTGACT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91317101 6 + 91754291 CTGACT i chlSab2.chr15 C 0 I 4 s calJac3.chr17 73797873 6 + 74750902 CTGACT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249866 6 - 17725628 CTGATT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6337815 6 + 6778120 CTGACT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 12958 6 - 21398 CTGAGT i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 177732 6 + 608964 TAGACT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32760412 6 + 98207768 TAGACT i mm10.chr16 C 0 C 0 s canFam3.chr33 2294762 6 - 31377067 TACACT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e macFas5.chr2 192362332 14732 - 192460366 M a score=126168.000000 s hg38.chr3_KI270934v1_alt 23252 17 + 163458 CAGGAGTACCCCAACCC s panTro5.chr3 200138386 17 + 202621043 CAGGAATACCCCAACGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84172 17 - 190779 CAGGAATACCCCAACGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5920 17 + 55620 CAGGAGTACCCAAACCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2793995 17 - 123690457 CAGGAATATCCCAACCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305098 17 - 204787373 CAGGAATACCCCAACCC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113209 17 - 19675229 CAGGAATACCCCAACCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345881 17 - 16847902 CAGGAATACCCCAACCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91317111 17 + 91754291 CAGGAATACCCCAACCC i chlSab2.chr15 I 4 C 0 s calJac3.chr17 73797879 17 + 74750902 CAGGAATACCCCAACCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249872 17 - 17725628 CTGGAATACCCCAACCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6337821 17 + 6778120 CAGGAACACCCCAACCC i cebCap1.NW_016107444v1 C 0 I 6 s aotNan1.NW_018492867v1 12964 17 - 21398 CAGGAATACCCCAACCC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 177738 11 + 608964 CAGCAGTGCCT------ i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32760418 17 + 98207768 CTGGAACACCCTACTCC i mm10.chr16 C 0 C 0 s canFam3.chr33 2294768 17 - 31377067 CGGGAATCCCCCCTCAC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e macFas5.chr2 192362332 14732 - 192460366 M a score=6990.000000 s hg38.chr3_KI270934v1_alt 23269 2 + 163458 AA s panTro5.chr3 200138403 2 + 202621043 AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84189 2 - 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5937 2 + 55620 AG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794012 2 - 123690457 AA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305115 2 - 204787373 AA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113226 2 - 19675229 AA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345898 2 - 16847902 AA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91317128 2 + 91754291 AA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73797896 2 + 74750902 AA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249889 2 - 17725628 AA i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 12981 2 - 21398 AA i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 177750 1 + 608964 A- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32760435 2 + 98207768 AA i mm10.chr16 C 0 C 0 s canFam3.chr33 2294785 2 - 31377067 AG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e macFas5.chr2 192362332 14732 - 192460366 M a score=22337.000000 s hg38.chr3_KI270934v1_alt 23271 10 + 163458 CCACGAGACT s panTro5.chr3 200138405 10 + 202621043 CCACGAGACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84191 10 - 190779 CCACGAGACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5939 10 + 55620 CCACGAGACT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794014 10 - 123690457 CCACGAAACT i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16345900 10 - 16847902 CCATGAAACT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91317130 10 + 91754291 CCATGAGACT i chlSab2.chr15 C 0 T 32 s otoGar3.GL873829 177751 10 + 608964 CCATGAGAGT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2294787 9 - 31377067 CCATGAGGT- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C a score=3600.000000 s hg38.chr3_KI270934v1_alt 23281 1 + 163458 G s panTro5.chr3 200138415 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84201 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5949 1 + 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794024 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16345910 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91317108 1 + 91754291 G i chlSab2.chr15 T 32 C 0 s otoGar3.GL873829 177761 1 + 608964 G i otoGar3.GL873829 C 0 I 11 s canFam3.chr33 2294796 1 - 31377067 G i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C a score=8148.000000 s hg38.chr3_KI270934v1_alt 23282 3 + 163458 ACC s panTro5.chr3 200138416 3 + 202621043 ACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84202 3 - 190779 ACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5950 3 + 55620 ACC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794025 3 - 123690457 ACC i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16345911 3 - 16847902 ACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91317109 3 + 91754291 ACC i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2294797 3 - 31377067 ACC i canFam3.chr33 C 0 I 5 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e otoGar3.GL873829 177762 11 + 608964 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C a score=32187.000000 s hg38.chr3_KI270934v1_alt 23285 18 + 163458 AGGAATACCCCAACCCAA s panTro5.chr3 200138419 18 + 202621043 AGGAATACCCCAACCCAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84205 18 - 190779 AGGAATACCCCAACCCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5953 17 + 55620 AGGAATA-CCCAACCCAA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794028 18 - 123690457 AGGAATACCCCAACCCAG i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16345914 18 - 16847902 AGGAATACCCCAACCCAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91317112 18 + 91754291 AGGAATACCCCAACCCAA i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C a score=13805.000000 s hg38.chr3_KI270934v1_alt 23303 10 + 163458 CCACGAGACT s panTro5.chr3 200138437 10 + 202621043 CCACGAGACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84223 10 - 190779 CCACGAGACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5970 10 + 55620 CCACGAGACT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794046 10 - 123690457 CCACGAGACT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317130 10 + 91754291 CCATGAGACT i chlSab2.chr15 C 0 T 32 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e cerAty1.NW_012004056v1 16345932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C a score=39181.000000 s hg38.chr3_KI270934v1_alt 23313 32 + 163458 GACCAGGAATACCCCAACCCGGCCGCGAGACT s panTro5.chr3 200138447 32 + 202621043 GACCAGGAATACCCCAACCCGGCCGCGAGACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84233 32 - 190779 GACCAGGAATACCCCAACCCGGCCGCGAGACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 5980 30 + 55620 GACCAGGAATA--CCAACCCGGCCGCGAGACT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794056 32 - 123690457 GACCAGGAATACCCCAGCCCAGCCACGAGACT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317108 32 + 91754291 GACCAGGAATACCCCAACCCAACCATGAGACT i chlSab2.chr15 T 32 T 32 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e cerAty1.NW_012004056v1 16345932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C a score=63738.000000 s hg38.chr3_KI270934v1_alt 23345 47 + 163458 GACCAGGAATACCCCAACCCAACCACGAGACTGACCAGGAATACCCC s panTro5.chr3 200138479 47 + 202621043 GACCAGGAATACCCCAACCCAACCACGAGACTGACCAGGAATACCCC i panTro5.chr3 C 0 T 96 s panPan2.chrUn_NW_014024201v1 84265 47 - 190779 GACCAGGAATACCCCAACCCAACCACGAGACTGACCAGGAATACCCC i panPan2.chrUn_NW_014024201v1 C 0 I 1 s gorGor5.CYUI01001831v1 6010 47 + 55620 GACCAGGAATACCCCAACCCGGCCGCGAGACTGACCAGGAATACCCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794088 47 - 123690457 GGCCAGGAATACCCCAGCCCAGCCACGAGACTGACCAGGAATACCCC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317108 47 + 91754291 GACCAGGAATACCCCAACCCAACCATGAGACTGACCAGGAATACCCC i chlSab2.chr15 T 32 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e cerAty1.NW_012004056v1 16345932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C a score=93318.000000 s hg38.chr3_KI270934v1_alt 23392 79 + 163458 AACCCAACCACGAGACTGACCAGGAATACCCCAACCCAACCACGAGACTGACCAGGAATACCCCAACCCAACCA----CGAGA s panTro5.chr3 200138430 79 + 202621043 AACCCAACCACGAGACTGACCAGGAATACCCCAACCCGGCCGCGAGACTGACCAGGAATACCCCAACCCAACCA----CGAGA i panTro5.chr3 T 96 C 0 s panPan2.chrUn_NW_014024201v1 84313 79 - 190779 GACCCAACCACGAGACTGACCAGGAATACCCCAACCCGGCCACGAGACTGACCAGGAATACCCCGACCCGGCCG----CGAGA i panPan2.chrUn_NW_014024201v1 I 1 C 0 s gorGor5.CYUI01001831v1 6057 81 + 55620 AACCCGGCCGCGAGACTGACCA-GAATA-CCCAACCCGGCCGCGAGACTGACCAGGAATACCCCAACCCGGCCGCCCCCGAGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794135 79 - 123690457 AACCCAGCCACGAGACTGACCAGGAATACCCCAGCCCAGCCACGAGACTGACCAGGAATACCCCAGCCCAGCCA----CGAGA i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317155 79 + 91754291 AACCCAACCATGAGACTGACCAGGAATACCCCAACCCAACCATGAGACTGACCAGGAATACCCCAACCCAACCA----TGAGA i chlSab2.chr15 C 0 T 32 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e cerAty1.NW_012004056v1 16345932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C a score=23900.000000 s hg38.chr3_KI270934v1_alt 23471 17 + 163458 CTGACCAGGAATACCCC s panTro5.chr3 200138509 17 + 202621043 CTGACCAGGAATACCCC i panTro5.chr3 C 0 T 140 s panPan2.chrUn_NW_014024201v1 84392 17 - 190779 CTGACCAGGAATACCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6138 17 + 55620 CTGACCAGGAATACCCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794214 17 - 123690457 CTGACCAGGAATACCCC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317202 17 + 91754291 CTGACCAGGAATACCCC i chlSab2.chr15 T 32 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e cerAty1.NW_012004056v1 16345932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C a score=11207.000000 s hg38.chr3_KI270934v1_alt 23488 15 + 163458 AACCCAACCACGAGA s panPan2.chrUn_NW_014024201v1 84409 15 - 190779 AACCCGGCCGCGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6155 15 + 55620 AACCCGGCCGCGAGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794231 15 - 123690457 AGCCCAGCCACGAGA i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317219 15 + 91754291 AACCCAACCATGAGA i chlSab2.chr15 C 0 T 64 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e cerAty1.NW_012004056v1 16345932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C e panTro5.chr3 200138526 140 + 202621043 T a score=4820.000000 s hg38.chr3_KI270934v1_alt 23503 5 + 163458 CTGAC s panPan2.chrUn_NW_014024201v1 84424 5 - 190779 CTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6170 5 + 55620 CTGAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794246 5 - 123690457 CTGAC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317170 5 + 91754291 CTGAC i chlSab2.chr15 T 64 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e cerAty1.NW_012004056v1 16345932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C e panTro5.chr3 200138526 140 + 202621043 T a score=65059.000000 s hg38.chr3_KI270934v1_alt 23508 50 + 163458 CAGGAATACACCAACCCAACCACGAGACTGACCAGGAATACCCCAACCCA s panTro5.chr3 200138386 50 + 202621043 CAGGAATACCCCAACGCAGCCACGAGACTGACCAGGAATACCCCAACCCA i panTro5.chr3 T 140 C 0 s panPan2.chrUn_NW_014024201v1 84429 50 - 190779 CAGGAATACCCCAACCCAACCACGAGACTGACCAGGAATACCCCAACCCA i panPan2.chrUn_NW_014024201v1 C 0 T 160 s gorGor5.CYUI01001831v1 6175 50 + 55620 CAGGAATACCCCAACCCGGCCGCGAGACTGACCAGGAATACCCCAACCCG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794251 50 - 123690457 CAGGAATACCCCAGCCCAGCCACGAGACTGACCAGGAATACCCCAGCCCA i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317175 50 + 91754291 CAGGAATACCCCAACCCAACCATGAGACTGACCAGGAATACCCCAACCCA i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e cerAty1.NW_012004056v1 16345932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C a score=10728.000000 s hg38.chr3_KI270934v1_alt 23558 9 + 163458 ACCACGAGA s panTro5.chr3 200138436 9 + 202621043 ACCACGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84319 9 - 190779 ACCACGAGA i panPan2.chrUn_NW_014024201v1 T 160 C 0 s gorGor5.CYUI01001831v1 6225 9 + 55620 GCCGCGAGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794301 9 - 123690457 GCCACGAGA i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317225 9 + 91754291 ACCATGAGA i chlSab2.chr15 C 0 T 126 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e cerAty1.NW_012004056v1 16345932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C a score=19702.000000 s hg38.chr3_KI270934v1_alt 23567 21 + 163458 CTGACCAGGAATACCCCAACC s panTro5.chr3 200138445 21 + 202621043 CTGACCAGGAATACCCCAACC i panTro5.chr3 C 0 n 0 s panPan2.chrUn_NW_014024201v1 84328 21 - 190779 CTGACCAGGAATACCCCAACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6234 21 + 55620 CTGACCAGGAATACCCCAACC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794310 21 - 123690457 CTGACCAGGAATACCCCAGCC i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e chlSab2.chr15 91317234 126 + 91754291 T e cerAty1.NW_012004056v1 16345932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C a score=11411.000000 s hg38.chr3_KI270934v1_alt 23588 13 + 163458 CGGCCGCGAGACT s panTro5.chr3 2485914 13 - 202621043 CGGCCGCGAGACT i panTro5.chr3 I 6987 C 0 s panPan2.chrUn_NW_014024201v1 84349 13 - 190779 CGGCCACGAGACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6255 13 + 55620 CGGCCGCGAGACT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794331 13 - 123690457 CAGCCACGAGACT i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e chlSab2.chr15 91317234 126 + 91754291 T e cerAty1.NW_012004056v1 16345932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C a score=41365.000000 s hg38.chr3_KI270934v1_alt 23601 32 + 163458 GACCAGGAATACCCCAACCCGGCCACGAGACT s panTro5.chr3 2485927 32 - 202621043 GACCAGGAATACCCCGACCCGGCCGCGAGACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84362 32 - 190779 GACCAGGAATACCCCGACCCGGCCGCGAGACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6268 32 + 55620 GACCAGGAATACCCCAACCCGGCCGCGAGACT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794344 32 - 123690457 GACCAGGAATACCCCAGCCCAGCCACGAGACT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317108 32 + 91754291 GACCAGGAATACCCCAACCCAACCATGAGACT i chlSab2.chr15 T 126 T 32 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e cerAty1.NW_012004056v1 16345932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C a score=25753.000000 s hg38.chr3_KI270934v1_alt 23633 19 + 163458 GACCAGGAATACCCCAACC s panTro5.chr3 2485959 19 - 202621043 GACCAGGAATACCCTAACC i panTro5.chr3 C 0 T 64 s panPan2.chrUn_NW_014024201v1 84394 19 - 190779 GACCAGGAATACCCTAACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6300 19 + 55620 GACCAGGAATACCCCAACC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794376 19 - 123690457 GACCAGGAATACCCCAGCC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317108 19 + 91754291 GACCAGGAATACCCCAACC i chlSab2.chr15 T 32 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e cerAty1.NW_012004056v1 16345932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C a score=54566.000000 s hg38.chr3_KI270934v1_alt 23652 47 + 163458 CGGCCACGAGACTGACCAGGAATACCCCAACCCAACCACGAGACTGA s panTro5.chr3 2485914 47 - 202621043 CGGCCGCGAGACTGACCAGGAATACCCCGACCCGGCCGCGAGACTGA i panTro5.chr3 T 64 C 0 s panPan2.chrUn_NW_014024201v1 84413 47 - 190779 CGGCCGCGAGACTGACCAGGAATACCCCAACCCAACCACGAGACTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6319 47 + 55620 CGGCCGCGAGACTGACCAGGAATACCCCAACCCGGCCGCGAGACTGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794395 41 - 123690457 CAGCCACGAGACTGACCAGGAATACCCCAACCCAACCACGA------ i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317127 47 + 91754291 CAACCATGAGACTGACCAGGAATACCCCAACCCAACCATGAGACTGA i chlSab2.chr15 C 0 T 4396 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e cerAty1.NW_012004056v1 16345932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C a score=23721.000000 s hg38.chr3_KI270934v1_alt 23699 28 + 163458 CCAGGAATACCCCAACCCAACCACGAGA s panTro5.chr3 2485961 28 - 202621043 CCAGGAATACCCTAACCCGGCCGCGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84460 28 - 190779 CCAGGAATACCCCAACCCAGCCACGAGA i panPan2.chrUn_NW_014024201v1 C 0 T 32 s gorGor5.CYUI01001831v1 6366 28 + 55620 CCAGGAATACCCCAACCCGGCCGCGAGA i gorGor5.CYUI01001831v1 C 0 C 0 s chlSab2.chr15 91312778 28 + 91754291 CCAGGAATACCCCAACCCAACCATGAGA i chlSab2.chr15 T 4396 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e manLeu1.NW_012102020v1 1369560 0 + 1977891 C e cerAty1.NW_012004056v1 16345932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C e nomLeu3.chr11 2794436 0 - 123690457 C a score=41393.000000 s hg38.chr3_KI270934v1_alt 23727 32 + 163458 CTGACCAGGAATACCCCAACCCGGCCGCGAGA s panTro5.chr3 2485989 32 - 202621043 CTGACCAGGAATACCCCAACCCAACCACGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84456 32 - 190779 CTGACCAGGAATACCCCAACCCAGCCACGAGA i panPan2.chrUn_NW_014024201v1 T 32 T 9 s gorGor5.CYUI01001831v1 6394 32 + 55620 CTGACCAGGAATACCCCAACCCGGCCGCGAGA i gorGor5.CYUI01001831v1 C 0 C 0 s chlSab2.chr15 91312806 32 + 91754291 CTGACCAGGAATACCCCAACCCAACCATGAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369560 32 + 1977891 CTGACCAGGAATACTCCAACCCAACCATGAGA i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e colAng1.NW_012118932v1 7324737 0 - 7796314 C e cerAty1.NW_012004056v1 16345932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C e nomLeu3.chr11 2794436 0 - 123690457 C a score=28923.000000 s hg38.chr3_KI270934v1_alt 23759 23 + 163458 CTGACCAGGAATACCCCAACCCG s panTro5.chr3 2486021 23 - 202621043 CTGACCAGGAATACCCCAACCCA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 6426 22 + 55620 CTGACCAGGAATA-CCCAACCCG i gorGor5.CYUI01001831v1 C 0 C 0 s chlSab2.chr15 91312838 23 + 91754291 CTGACCAGGAATACCCCAACCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369592 23 + 1977891 CTGACCAGGAATACCCCAACCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324737 23 - 7796314 CTGACCAGGAATGCCCCAACCCA i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e cerAty1.NW_012004056v1 16345932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C e nomLeu3.chr11 2794436 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 84488 9 - 190779 T a score=501.000000 s hg38.chr3_KI270934v1_alt 23782 1 + 163458 G s panTro5.chr3 2486044 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84479 1 - 190779 G i panPan2.chrUn_NW_014024201v1 T 9 C 0 s gorGor5.CYUI01001831v1 6448 1 + 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 s chlSab2.chr15 91312861 1 + 91754291 A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369615 1 + 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324760 1 - 7796314 A i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e mm10.chr16 32760437 0 + 98207768 C e aotNan1.NW_018492867v1 12983 0 - 21398 C e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e macNem1.NW_012014355v1 19113228 0 - 19675229 C e saiBol1.JH378146 17249891 0 - 17725628 C e calJac3.chr17 73797898 0 + 74750902 C e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e cerAty1.NW_012004056v1 16345932 0 - 16847902 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2305117 0 - 204787373 C e nomLeu3.chr11 2794436 0 - 123690457 C a score=27649.000000 s hg38.chr3_KI270934v1_alt 23783 4 + 163458 CCAC s panTro5.chr3 2486045 4 - 202621043 CCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84480 4 - 190779 CCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6449 4 + 55620 CCGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794436 4 - 123690457 CCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305117 4 - 204787373 CCAT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113228 4 - 19675229 CCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345932 4 - 16847902 CCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91312862 4 + 91754291 CCAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369616 4 + 1977891 CCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324761 4 - 7796314 CCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797898 4 + 74750902 TCAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249891 4 - 17725628 TCAT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 12983 4 - 21398 TCAT i aotNan1.NW_018492867v1 C 0 C 0 s mm10.chr16 32760437 4 + 98207768 CCAT i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e cebCap1.NW_016107444v1 6337838 6 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e macFas5.chr2 192362332 14732 - 192460366 M a score=97215.000000 s hg38.chr3_KI270934v1_alt 23787 10 + 163458 GAGAAGA-CCT s panTro5.chr3 2486049 10 - 202621043 GAGAAGA-CCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84484 10 - 190779 GAGAAGA-CCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6453 10 + 55620 GAGAAGA-CCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794440 10 - 123690457 AAGAAGA-CCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305121 10 - 204787373 GAGAAGA-CCT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113232 10 - 19675229 GAGAAGA-CCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345936 10 - 16847902 GAGAAGA-CCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91312866 10 + 91754291 GAGAAGA-CCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369620 10 + 1977891 GAGAAGA-CCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324765 10 - 7796314 GAGAAGA-CCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797902 10 + 74750902 GAGAAGA-CCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249895 10 - 17725628 GAGAAGA-CCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6337844 10 + 6778120 GAGAAGA-CCT i cebCap1.NW_016107444v1 I 6 C 0 s aotNan1.NW_018492867v1 12987 11 - 21398 GAGAAGACCCT i aotNan1.NW_018492867v1 C 0 C 0 s mm10.chr16 32760441 10 + 98207768 GTAAGGA-CTT i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e canFam3.chr33 2294800 5 - 31377067 I e otoGar3.GL873829 177762 11 + 608964 I e macFas5.chr2 192362332 14732 - 192460366 M a score=62782.000000 s hg38.chr3_KI270934v1_alt 23797 10 + 163458 ACAGGTGACG- s panTro5.chr3 2486059 10 - 202621043 GCAGGTGACG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84494 10 - 190779 GCAGGTGACG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6463 9 + 55620 GCAGGTGAC-- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794450 9 - 123690457 GCAGGTGAT-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305131 9 - 204787373 GCAGGTGAT-- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113242 9 - 19675229 GCAGGTGAT-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345946 9 - 16847902 GCAGGTGAT-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91312876 9 + 91754291 GCAGGTGAT-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369630 9 + 1977891 GCAGGTGAT-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324775 9 - 7796314 GCAGGTGAT-- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797912 9 + 74750902 GCAGGTGTC-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249905 9 - 17725628 GCAGCTGTC-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6337854 9 + 6778120 GCAGGTGTC-- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 12998 9 - 21398 GCAGGTGTC-- i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 177773 9 + 608964 ACAGGGGAC-- i otoGar3.GL873829 I 11 I 1 s mm10.chr16 32760451 10 + 98207768 GCAGGTGAC-A i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e micMur3.chr1 88357422 175 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=6734.000000 s hg38.chr3_KI270934v1_alt 23807 1 + 163458 G s panTro5.chr3 2486069 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84504 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6472 1 + 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794459 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305140 1 - 204787373 G i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113251 1 - 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345955 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91312885 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369639 1 + 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324784 1 - 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17249914 1 - 17725628 A i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6337863 1 + 6778120 A i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 13007 1 - 21398 A i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88357597 1 + 114275543 G i micMur3.chr1 I 175 C 0 s otoGar3.GL873829 177783 1 + 608964 G i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32760461 1 + 98207768 G i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14767873 153 - 22200726 I e dasNov3.JH569502 2670018 365 - 6579706 I e calJac3.chr17 73797921 0 + 74750902 C e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=273632.000000 s hg38.chr3_KI270934v1_alt 23808 23 + 163458 GGGATGGGGGCTGACAATTCAGC s panTro5.chr3 2486070 23 - 202621043 GGGATAGGGGCTGACAATTCGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84505 23 - 190779 GGGATAGGGGCTGACAATTCGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6473 23 + 55620 GGGATAGGGGCTGACAATTCAGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794460 23 - 123690457 GGGATGGGGGCTGACAATTCAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305141 23 - 204787373 GGGATGGGAGCTGACAATTCAGC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113252 23 - 19675229 GGGATGGGAGCTGACAATTCAGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345956 23 - 16847902 GGGATGGGAGCTGACAATTCAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91312886 23 + 91754291 GGGATGGGAGCTGACAATTCAGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369640 23 + 1977891 GGGATGGGAGCTGACAATTCAGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324785 23 - 7796314 GGGATGGGAGCTGACAATTCAGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797921 23 + 74750902 GGGGTCGGGGCTAACAGTGCAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249915 23 - 17725628 GGGGTGGGGGCTAACAGTGCAAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6337864 23 + 6778120 GGGATGGGGGCTAACAGTGCAGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 13008 23 - 21398 GGGATGGGGGCTAACAGTGCAGC i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88357598 23 + 114275543 GGGATAGGGGTTGGCAATTCAGC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14768026 23 - 22200726 GGGATAGGGGTTGGCAATTCAGC i proCoq1.NW_012133858v1 I 153 C 0 s otoGar3.GL873829 177784 22 + 608964 -GGATAGGGTTTGGCAACTCAGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32760462 20 + 98207768 -GGACAGAGGTTG--AGTCCAGC i mm10.chr16 C 0 I 20 e dasNov3.JH569502 2670018 365 - 6579706 I e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=446627.000000 s hg38.chr3_KI270934v1_alt 23831 40 + 163458 CTTTGATTGTAAAATCAGGCTGTAGGGGGTCTATCCTAAC s panTro5.chr3 2486093 40 - 202621043 CTTTGATTGTAAAATCAGGCTGCAGGGGGTCTATCCTAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84528 40 - 190779 CTTTGATTGTAAAATCAGGCTGTAGGGGGTCTATCCTAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6496 40 + 55620 CTTTGATTGTAAAATCAGGCTGTAGGGGGTCTATCCTAAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794483 40 - 123690457 CTTTGATTATAAAATCAGGCTGTAGGGGGTCTATCCTAAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305164 40 - 204787373 CTTTGATTGTAAAATCAGGCTGTAGGGGGTCTATCCTAAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113275 40 - 19675229 CTTTGATTGTAAAATCAGGCTGTAGGGGGTCTATCCTAAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16345979 40 - 16847902 CTTTGATTGTAAAATCAGGCTGTAGGGGGTCTATCCTAAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91312909 40 + 91754291 CTTTGATTGTAAAATCAGGCTGTAGGGGGTCTATCCTAAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369663 40 + 1977891 CTTTGATTGTAAAATCAGGCTGTAGGGGGTCTATCCTAAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324808 40 - 7796314 CTTTGATTGTAGAATCAGGCTGTAGGGGGTCTATCCTAAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797944 40 + 74750902 ATTTGATTGTGAAATCAGGCTGCAGGGTATTGATCCTAAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249938 39 - 17725628 ACTTGATTGTAAAATAAGGCTGTA-GGTGTCGACCCTAAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6337887 40 + 6778120 ATTTGATTGTAAAATAAGGCTGCGGGGTGTCGGTCCTAAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 13031 40 - 21398 ATTTGATTGTAAAATAAGGCTGCAGGGTGTCGATCCTAAC i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88357621 40 + 114275543 ATTTGCTTTTAAAATAAGTCCGTAGAGGGTCTATCCTAAC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14768049 40 - 22200726 ATTTGCTTTTAAAACAAGGCTGTAAAGGGTCTATCCTAAC i proCoq1.NW_012133858v1 C 0 I 285 s otoGar3.GL873829 177806 40 + 608964 ATCTGACTATAAAATAAGGCAGAAGGGAGTCCATCCTAAC i otoGar3.GL873829 C 0 C 0 e mm10.chr16 32760482 20 + 98207768 I e dasNov3.JH569502 2670018 365 - 6579706 I e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=28123.000000 s hg38.chr3_KI270934v1_alt 23871 3 + 163458 AAG s panTro5.chr3 2486133 3 - 202621043 AAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84568 3 - 190779 AAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6536 3 + 55620 AAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794523 3 - 123690457 AAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305204 3 - 204787373 AAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113315 3 - 19675229 AAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16346019 3 - 16847902 AAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91312949 3 + 91754291 AAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369703 3 + 1977891 AAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324848 3 - 7796314 AAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797984 3 + 74750902 AGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249977 3 - 17725628 AGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6337927 3 + 6778120 AGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 13071 3 - 21398 AGG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88357661 3 + 114275543 AAG i micMur3.chr1 C 0 I 232 s otoGar3.GL873829 177846 3 + 608964 AAG i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14768089 285 - 22200726 I e mm10.chr16 32760482 20 + 98207768 I e dasNov3.JH569502 2670018 365 - 6579706 I e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=14655.000000 s hg38.chr3_KI270934v1_alt 23874 2 + 163458 AG- s panTro5.chr3 2486136 2 - 202621043 AG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84571 2 - 190779 AG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6539 2 + 55620 AG- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794526 2 - 123690457 AG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305207 2 - 204787373 AG- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113318 2 - 19675229 AG- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16346022 2 - 16847902 AG- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91312952 2 + 91754291 AG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369706 2 + 1977891 AG- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324851 2 - 7796314 AG- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797987 2 + 74750902 AG- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249980 2 - 17725628 AG- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6337930 2 + 6778120 AG- i cebCap1.NW_016107444v1 C 0 I 56 s aotNan1.NW_018492867v1 13074 2 - 21398 AG- i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 177849 2 + 608964 -GC i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14768089 285 - 22200726 I e mm10.chr16 32760482 20 + 98207768 I e micMur3.chr1 88357664 232 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=113972.000000 s hg38.chr3_KI270934v1_alt 23876 18 + 163458 TGAGTCAAG-AGGGCC---------------CGT s panTro5.chr3 2486138 18 - 202621043 TGAGTCAAG-AGGGCC---------------TGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84573 18 - 190779 TGAGTCAAG-AGGGCC---------------CGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6541 18 + 55620 TGAGTCAAG-AGGGCC---------------CGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794528 18 - 123690457 TGAGTCAAG-AGGGCC---------------CGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305209 18 - 204787373 TGAGTCAAG-AGGGCC---------------TGT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113320 18 - 19675229 TGAGTCAAG-AGGGCC---------------TGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16346024 18 - 16847902 TGAGTCAAG-AGGGCC---------------TGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91312954 18 + 91754291 TGAGTCAAG-AGGGCC---------------TGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369708 18 + 1977891 TGAGTCAAG-AGGGCC---------------TGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324853 18 - 7796314 TGAGTCAAG-AGGGCC---------------TGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73797989 19 + 74750902 GGAGTCCAGTAGGGCC---------------TGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17249982 19 - 17725628 GGGGTCCGGCAGGGCC---------------CCT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 13076 19 - 21398 GGAGTCCAGCAGGGCC---------------CCT i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 177851 33 + 608964 TGAGTCAGA-CAGGCCTCCTCCTCTGCCCCGTGC i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14768089 285 - 22200726 I e mm10.chr16 32760482 20 + 98207768 I e micMur3.chr1 88357664 232 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e cebCap1.NW_016107444v1 6337932 56 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=492685.000000 s hg38.chr3_KI270934v1_alt 23894 65 + 163458 CCTGTGCTCCTGGACTGGGTGAATAACT----CCAATCAGAGGAA--ATGTGATGAAAGCTACTGCAGGAA s panTro5.chr3 2486156 61 - 202621043 CCTGTGCTCCTGGACTGGGTGAATAACT----CCA----GAGGAA--ACGTGATGAAAGCTACTGCAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84591 61 - 190779 CCTGTGCTCCTGGACTGGGTGAATAACT----CCA----GAGGAA--ACGTGATGAAAGCTACTGCAGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6559 65 + 55620 CCTGTGCTCCTGGACTGGGTGAATAACT----CCAATCAGAGGAA--ACGTGATGAAAGCTACTGCAGGAA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794546 67 - 123690457 CCTGTGCTCCTGGACTGGGTGAATAACT----CCAATCAGAGGAAGCATGTGATGAAAGCTACTGCAGGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305227 67 - 204787373 CCTGTGCTCCTGGACTGGGTGAATAACT----CCAATTAGAGGAAGCACGTGATGAAAGCTACTGCAGGAA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113338 67 - 19675229 CCTGTGCTCCTGGACTGGGTGGATAACT----CCAATTAGAGGAAGCACGTGATGAAAGCTACTGCAGGAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16346042 67 - 16847902 GCTGTGCTCCTGGACTGGGTGAATAACT----CCAATTAGAGGAAGCACGTGATGAAAGCTACTGCAGGAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91312972 67 + 91754291 CCTGTGCTCCTGGACTGGGTGAATAACT----CCAATGAGAGGAAGCACGTGATGAAAGCTACTGCAGGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369726 67 + 1977891 GCTGTGCTCCTGGACTGGGTGAATAACT----CCAATTAGAGGAAGCACGTGATGAAAGCTACTGCAGGAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324871 67 - 7796314 CCTGTGCTCCTGGACTGGGTGAATAACT----CCAATTAGAGGAAGCACGTGATGAAAGCTCCTGCAGGAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73798008 67 + 74750902 CCTGGGCTCCTGGACTGGGTTAGTAACG----CCAAGCAGGGGAAGCCTGTGACGAAAGCCACTGTGGCAA i calJac3.chr17 C 0 I 413 s saiBol1.JH378146 17250001 66 - 17725628 CCTGTGCTCCTGGACTGGGTTAATAACG----CCAATCAGAGGAAGCCTGTGAGGAGGGCTGCTGCAGCA- i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 13095 67 - 21398 CCTGTGCTCCTGGACTGGGTTAACCACG----CCAATCAGAGGAAGCCTGTGATGAAAGCTCCTGCGGCAA i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 177884 71 + 608964 CCCATGCTGCTGCACTGGGTCAATCAATCATCCCAGCCAGTGGAGACATGTCCTGGAAGCTGCTGTGGCAG i otoGar3.GL873829 C 0 I 3 s mm10.chr16 32760502 67 + 98207768 CCAACACTCCTGAATTAAGTTAATAATG----CCAGCCTGTGAACGTGCAGAGCAGAGGCTGTCATAGCAA i mm10.chr16 I 20 C 0 e proCoq1.NW_012133858v1 14768089 285 - 22200726 I e micMur3.chr1 88357664 232 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e cebCap1.NW_016107444v1 6337932 56 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=110713.000000 s hg38.chr3_KI270934v1_alt 23959 22 + 163458 GTGTG-----------------------------GACCGTGCCCCTGCCAC s panTro5.chr3 2486217 22 - 202621043 GTGTG-----------------------------GACCGTGCCCCTGCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84652 22 - 190779 GTGTG-----------------------------GACCGTGCCCCTGCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6624 22 + 55620 GTGTG-----------------------------GACCGTGCCCCTGCCAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794613 22 - 123690457 GTGTG-----------------------------GACCATGCCCCTGCCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305294 51 - 204787373 GTGTGGACCATGTGCCTGCCATGGACGAAGTGTGGACCATGCCCCTGCCAT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113405 51 - 19675229 GTGTGGGCCATGTGCCTGCCATGGACGAAGTGTGGACCGTGCCCCTGCCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16346109 51 - 16847902 GTGTGGACCATGTGCCTGCCATGGACCAAGTGTGGACCGTGCCCCTGCCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91313039 51 + 91754291 GTGTGGACCATGTGCCTGCCATGGACGAAGTGTGGACCGTGCCCCTGCCAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369793 51 + 1977891 GTGTGGACCATGTGCCTGCCATGGACGAAGTGTGGACTGTGCCCCTGCCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324938 51 - 7796314 GTGTGGACTAGGTGCCTGCCATGGACGAAGTGTAGACCGTGCCCCTGCCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73798488 22 + 74750902 GCGTG-----------------------------GACTGTGCCCCTGCCAC i calJac3.chr17 I 413 C 0 s saiBol1.JH378146 17250067 7 - 17725628 GTGTG-----------------------------GA--------------- i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 13162 22 - 21398 GTGTG-----------------------------GACTGCGCCGCTGCCAC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 177958 14 + 608964 ------------------------------------CTGTGCC-CTGCAAT i otoGar3.GL873829 I 3 C 0 s mm10.chr16 32760569 22 + 98207768 -----------------------------ATACATTTTGTGTGCCTGCCGC i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14768089 285 - 22200726 I e micMur3.chr1 88357664 232 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e cebCap1.NW_016107444v1 6337932 56 + 6778120 I e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=333033.000000 s hg38.chr3_KI270934v1_alt 23981 39 + 163458 GGACAGGGCAGTGTGGAGGCTCC-AAGAGGAAGAGACTCA s panTro5.chr3 2486239 39 - 202621043 GGACAGGGCAGTGTGGAGGCTCC-AAGAGGAAGAGACTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84674 39 - 190779 GGACAGGGAAGTGTGGAGGCTCC-AAGAGGAAGAGACTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6646 39 + 55620 GGACAGGGCAGTGTGGAGGCTCC-AAGAGGAAGAGACTCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794635 39 - 123690457 GGATAGGGCAGTGTGGAGGCTCC-AAGAGAGAGAGACTGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305345 39 - 204787373 GGACACGGCAGTGTAGAGGCTCC-AAGAGGGAGCGTCTCA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113456 39 - 19675229 GGACAGGGCAGTGTGGAGGCTCC-AAGAGGGAGAGTCTCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16346160 39 - 16847902 GGACACGGCAGTGTAGAGGCTCC-AAGAGGGAGAGTCTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91313090 39 + 91754291 GGACAGGGCAGTGTGGAGGCTCC-AAGAGGGAGAGTCTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369844 39 + 1977891 GGACAGGGCAGTGTGGAGGCTCC-AAGAGGGAGAGTCTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7324989 39 - 7796314 GGACAGGGCAGTGTGGAGGCTCC-AACAGGGAGAGTCTCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73798510 39 + 74750902 GGGCAGAGCAGTGTAAAGGCTCC-AAGATGGAGAGAACCA i calJac3.chr17 C 0 I 281 s saiBol1.JH378146 17250074 36 - 17725628 ---CAGGGCAGTGCAGAGACTCC-GAGGTGGAGAGAACCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6337988 39 + 6778120 GGACAGGGCAGTGCAGAGGCTCC-AAGACGGAGAGAGCCA i cebCap1.NW_016107444v1 I 56 C 0 s aotNan1.NW_018492867v1 13184 39 - 21398 GGACAGGGCAGCGTAGAGGCTCC-GAGATGGGGAGAACCG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 177972 40 + 608964 GGACAAGGCACTATAGAGGCTCCAAAGATGCAAAGACTCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32760591 40 + 98207768 TGACAAAGCTCTACCTAGGTTTCAAAGATGGACAGACCTG i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14768089 285 - 22200726 I e micMur3.chr1 88357664 232 + 114275543 I e dasNov3.JH569502 2670018 365 - 6579706 I e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=800370.000000 s hg38.chr3_KI270934v1_alt 24020 92 + 163458 CGCCTGTTCTCAAGAAGCTG-CAGATTAGGCATGGGGAGGTAAAAGTGGGCCCGAGTGGCTCTGCTCTCTGGGCCAGTTTGAGCTA--AGATGCT s panTro5.chr3 2486278 92 - 202621043 TGCCTGTTCTCAAGAAGCTG-CAGATTAGGCATGGGGAGGTAAAAGTGGGCCCGAGTGGCTCTGCTCTCTGGACCAGTTTGAGCTA--AGACGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84713 92 - 190779 TGCCTGTTCTCAAGAAGCTG-CAGATTAGGCATGGGGAGGTAAAAGTGGGCCCGAGTGGCTCTGCTCTCTGGACCAGTTTGAGCTA--AGACGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6685 92 + 55620 TGCCTGTTCTCAAGAAGCTG-CAGATTAGGCATGGGGAGGTAAAAGTGGGCCCGAGTGGCTCTGCTCTCTGGGCCAGTTTGAGCTA--AGACGCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794674 94 - 123690457 TGCCTGTTCTCAAGGAGCTG-CAGATTAGGCATGGGGAGGTAAAAGTGGGCCCGAGTGGCTCTGCTCTCTGGGCCACTTTGAGCTAAGAGACGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305384 94 - 204787373 TGCCTGTTCTCAAGGAGCTG-CAGATTAGGCATGGGGAGGTAAAAGTGGGCCCGAGTGGCTTTGCTCTCTGGGCCAGTTTGAGCTAAGAGACGCT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113495 94 - 19675229 TGCCTGTTCTCAAGGAGCTG-CAGATTAGGCATGGGGAGGTAAAAGTGGGCCTGAGTGGCTTTGCTCTCTGGGCCAGTTTGAGCTAAGAGACGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16346199 94 - 16847902 TGCCTGTTCTCAAGGAGCTG-CAGATTAGGCATGGGGAGGTAAAAGTGGGCCTGAGTGGCTTTGCTCTCTGGGCCAGTTTGAGCTAAGAGATGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91313129 94 + 91754291 TGCCTGTTCTCAAGGAGCTG-CAGATTAGGCATGGGGAGGTAAAAGTGGGCCCGAGTGGCTTTGCTCTCTGGGCCAGTTTGAGCTAAGAGACGCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369883 94 + 1977891 TGCCTGTTCTCAAGGAGCTG-CAGATTAGGCATGGGGAGGTAAAAGTGGGCCTGAGTGGCTTTGCTCTCTGGGCCAGTTTGAGCTAAGAGATGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7325028 94 - 7796314 TGCCTGCTCTTAAGGAGCTG-CAGATTAGGCAAGGGGAGGTAAAAGTGGGCCTGAGTGGCTTTGCTCTCGGGGTCAGTTTGAGCTAAGAGACGCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73798830 81 + 74750902 CGCCTGTCCTCAAGCAGCT--CAGATTAGGCAT-GGGAGGTGAAAGAGGGCCCGAGTGGCTCTGCCCTCTGGGACAGTTTGAGT----------- i calJac3.chr17 I 281 C 0 s saiBol1.JH378146 17250110 81 - 17725628 CGCCTGTCCTCAGGCAGCT--CAGATTAGGCAC-GGGAGGCAGAGGAGGGCCCGAGTGGCTGTGCCCTCTGAGACAGTTTGAGC----------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6338027 92 + 6778120 CGCCTGTCCTCAGGCAGCT--CAGATGAGGCAT-GGGAGGGGAAAGGGGGCCCGAGTGGCTGTGCCCTCTGGGACAGTCTGAGCTAAGAGATGCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 13223 90 - 21398 TGCCTGTCCTCAAGCAGCT--CAGATTAGGCGT-GGGAGGTGAAAGAGGGCCCGAGGGGCTGTGCC--CTGGGACAGTTTGAGCTAAGAGACGCT i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 178012 94 + 608964 TGCCTGTCCTCACGGAGGCACCAAAGCAGACAA-AGGAGGCAAAAATGGGCTCCACTGGTTACCCTGTCTGAGCCAGTCTGAGCTGGGAGCAGTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32760631 94 + 98207768 CATCTGTCTTTAAGGAGTTA-CAAGCTAGACATGGGAATGTAAAAGTAGACACAAATGGTCATACCATGCAAGCTGTTTTAAACTAAGGGATGTA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2670383 85 - 6579706 CACCTGTCCTCAAGGAGCCT-CCAGTCAAACTCAGGGAGGTAAAA-TGTGCACAAGGGGCTACGA-----GGTTCA---TGAGCAATAGGATGGA i dasNov3.JH569502 I 365 C 0 e proCoq1.NW_012133858v1 14768089 285 - 22200726 I e micMur3.chr1 88357664 232 + 114275543 I e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=474933.000000 s hg38.chr3_KI270934v1_alt 24112 51 + 163458 TGAGTTCAAGTCCAGAG--------GTCTT---------GGACGTCTGGGCCACGACCCTGCATTCTG s panTro5.chr3 2486370 51 - 202621043 TGAGTTCAAGTCCAGAG--------GTCTT---------GGACGTCTGGGCCACGACCCTGCAGTCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84805 51 - 190779 TGAGTTCAAGTCCAGAG--------GTCTT---------GGACGTCTGGGCCACGACCCTGCAGTCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6777 51 + 55620 TGAGTTCAAGTCCAGAG--------GTCTT---------GGACGTCTGGGCCACGACCCTGCATTCTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794768 51 - 123690457 TGAGTTCAAGTCCAGAG--------GTCTT---------GGACGTCTGGGCCACGACCCTGCATTCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305478 51 - 204787373 TGAGTTCAAGTCCAGAG--------GTCTT---------GGACGTCTGGGCCAGGACTCTGCATTCTG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113589 51 - 19675229 TGAGTTCAAGTCCAGAG--------GTCTT---------GGACGTCTGGGCCAGGACTCTGCATTCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16346293 51 - 16847902 TGAGTTCAAGTCCAGAG--------GTCTT---------GGACGTCTGGGCCAGGACTCTGCATTCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91313223 51 + 91754291 TGAGTTCAAGTCCAGAG--------GTCTT---------GGACGTCTGGGCCAGGACTCTGCATTCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1369977 51 + 1977891 TGAGTTCAAGTCCAGAG--------GTCTT---------GGACGTCTGGGCCAGGACTCTGCATTCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7325122 51 - 7796314 TAAGTTCAAGTCCAGAG--------GTCTT---------GGACGTCTGGGCCAGGACTCTGCATTCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73798911 46 + 74750902 -----TCAAGTCCAGAG--------GTCTT---------GGATGTCATGGCCAGGACCCTGCATCCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17250191 46 - 17725628 -----TCAAGTGCAGAG--------GTCTT---------GGACGTCGTGGCTAGGACCCTGCACCCCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6338119 50 + 6778120 AGAG-TCAAGTCCAGAG--------GTCTT---------GGACGTCGTGGCCAGGACCCTGCACCCCG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 13313 51 - 21398 TGAGTTCAAGTCCAGAG--------GTCTT---------GGACGTAGTGGCCAGGGCCCCGCATCCCG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88357896 49 + 114275543 TGAGTTCCAGTCCAGAG--------GACTC---------TGACTTCTGGGCCAGGATCTTCCATTC-- i micMur3.chr1 I 232 C 0 s otoGar3.GL873829 178106 33 + 608964 TGAGTTCCTCTGTAGAG--------GACTC-------------------------ATCTCCCCTTC-- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32760725 51 + 98207768 TCAATTCAATTCCAGAA--------GGCTT---------GGCTTTCTGGATAGAGCCCCTCTAGTTCA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2670468 68 - 6579706 AATGTTCCAGTTCAGAGGCGCATACGTCCTCACTGGTGGGGATTTCAGGGCCTAGACCCTCCACTCCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14768089 285 - 22200726 I e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=453864.000000 s hg38.chr3_KI270934v1_alt 24163 35 + 163458 --CACACTGCAGGCCTTCCTGCAGCCCAAGTTTGAAT s panTro5.chr3 2486421 35 - 202621043 --CACACTGCAGGCCTTCCTGCAGCCCAAGTTTGAAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84856 35 - 190779 --CACACTGCAGGCCTTCCTGCAGCCCAAGTTTGAAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6828 35 + 55620 --CACACTGCAGGCCTTCCTGCAGCCCAAGTTTGAAT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794819 35 - 123690457 --CACACTGCAGGCCTTCCTGCAGCCCAAGTTTGAAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305529 35 - 204787373 --CACACTGCAGGCCTTCCTGCAGCCCGAGTTTGAAT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113640 35 - 19675229 --CACACTGCAGGCCTTCCTGCAGCCCGAGTTTGAAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16346344 35 - 16847902 --CACAGTGCAGGCCTTCCTGCAGCCCGAGTTTGAAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91313274 35 + 91754291 --CACACTGCAGGCCTTCCTGCAGCCCGAGTTTGAAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1370028 35 + 1977891 --CATACTGCAGGCCTTCCTGCAGCCCGAGTTTGAAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7325173 35 - 7796314 --CATACTGCAGGCCTTCCTGCAGCCTGAGTTTGAAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73798957 35 + 74750902 --CATGCTGCAGGCCTTCCTGCAGCCCAGGTTTGAAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17250237 35 - 17725628 --CACCCCGCAGGCCTTCCTGCAGCCCAGGTTTGAAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6338169 35 + 6778120 --CACACTGCAGGCCTTCCTGCAGCCCAGGTTTGAAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 13364 34 - 21398 --CACACTGCA-GCCTTCCTGCAGCCCAGGTTTGAAC i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88357945 35 + 114275543 --CACACTGCAGGCTTTCTTGCAGCCCAAATTTGAAT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14768374 35 - 22200726 --CACGCTGCAGGTTTTCCTGCAGCCCAAATTTGAAT i proCoq1.NW_012133858v1 I 285 I 143 s otoGar3.GL873829 178139 35 + 608964 --CACACCACAGACTTTGCTGCAACCCAAATTCAAAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32760776 18 + 98207768 --CATGTCCCAGATTCTCCT----------------- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2670536 36 - 6579706 TACACCCC-CAGGCTTCCCTGCAGCCAAAATTTGAAC i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=493183.000000 s hg38.chr3_KI270934v1_alt 24198 49 + 163458 ---------------------------------------------------------------------------------------------------------------------------TGAACTTCACCTCAGAAAAGCTCACGGCAAAAATGCAGGCCTGGGACAG s panTro5.chr3 2486456 49 - 202621043 ---------------------------------------------------------------------------------------------------------------------------TGAACTTCACCTCAGAAGAGCTCACGGCAAAAATGCAGGCCTGGGACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84891 49 - 190779 ---------------------------------------------------------------------------------------------------------------------------TGAACTTCACCTCAGAAGAGCTCACGGCAAAAATGCAGGCCTGGGACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6863 48 + 55620 ---------------------------------------------------------------------------------------------------------------------------TGAACTTCACCTCAGAAGAGCTCACGGCAAAAATGCAGGCCTGGGAC-G i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794854 49 - 123690457 ---------------------------------------------------------------------------------------------------------------------------TGCACTTCACCTCAGAAGAGGTCATGGCAAAAATGCAGGCCTGGGACAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305564 49 - 204787373 ---------------------------------------------------------------------------------------------------------------------------TGAACTTCACGTCAGAAGAGCTCACGGCAAAAATGCAGGCCTGGGACAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113675 49 - 19675229 ---------------------------------------------------------------------------------------------------------------------------TGAACTTCACGTCAGAAGAGCTCACGGCAAAAATGCAGGCCTGGGACAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16346379 49 - 16847902 ---------------------------------------------------------------------------------------------------------------------------TGAACTTCACGTCAGAAGAGCTCACGGCAAAAATGCAGGCCTGGGACAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91313309 49 + 91754291 ---------------------------------------------------------------------------------------------------------------------------TGAACTTCACGTCAGAAGAGCTCACGGCAAAAATGCAGGCCTGGGACAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1370063 49 + 1977891 ---------------------------------------------------------------------------------------------------------------------------TGAACTTCACGTCAGAAGAGCTCACGGCAAAAATGCAGGCCTGGGACAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7325208 48 - 7796314 ---------------------------------------------------------------------------------------------------------------------------TGAACTTCACGTCAGAAGAGCTCACAGCAAAAACGCAGGCCTGGGACA- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73798992 49 + 74750902 ---------------------------------------------------------------------------------------------------------------------------TGAACTTCACTTCAGAAGAGCTCATGGTAAAAACGCAGGCCTGGGACAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17250272 49 - 17725628 ---------------------------------------------------------------------------------------------------------------------------TGAACTTTGCTTCAGAAAAGCTGATGGTAAAAACGCAGGCCTGGGACAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6338204 49 + 6778120 ---------------------------------------------------------------------------------------------------------------------------TGAACTTCACTTCAGAAGAGCTCATGGTAAAAACGCAGGCCTGGGACAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 13398 49 - 21398 ---------------------------------------------------------------------------------------------------------------------------TGAACTTCACTTCAGAAGAGCTCATGGTACAAATGCAGGCCTGGGACAG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88357980 49 + 114275543 ---------------------------------------------------------------------------------------------------------------------------TGATCTTCAGATAAGAAGAGCTAATTGTAAAAGTGCAGGCCTGAGACAG i micMur3.chr1 C 0 I 72 s otoGar3.GL873829 178174 49 + 608964 ---------------------------------------------------------------------------------------------------------------------------CCATCTTCAGATCAGAAGAGTTAATTGTTAAAACGCAGGGCTGGGACAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32760794 46 + 98207768 ---------------------------------------------------------------------------------------------------------------------------TGATTTTAAAATCATAAGGGTTT---GTAAAAATTCACACTTGGGAAAA i mm10.chr16 C 0 I 4 s dasNov3.JH569502 2670572 172 - 6579706 TGATCTTTCTTTTTTTTTAGTTCGAATTTTTAAAAAAttttaaaggagctttggtttacataaatattacttaaaagatataaaggattcccatatactccactccctccccTTCCCTTGAACTGATCTTAAGGTCAGAGGTGCTCATTGTGAAAATGCAGGCCTCCGAGAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14768409 143 - 22200726 I e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=481381.000000 s hg38.chr3_KI270934v1_alt 24247 73 + 163458 GGGAGGGCAGGCCAT-TGGGTGGGCTGAAGTGGGCAGGGTCCTCAGGCAGAAAGT-GGGGG----------------------------------------------------G---CCCATGTGTAG-GA----- s panTro5.chr3 2486505 75 - 202621043 GGGAGGGCAGGCCATGTGGGTGGGCTAAAGTGGGCAGGGTCCTCAGGCAGAAAGT-GGGGG----------------------------------------------------GG--TCCATGTGTAG-GA----- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 84940 75 - 190779 GGGAGGGCAGGCCATGTGGGTGGGCTAAAGTGGGCAGGGTCCTCAGGCAGAAAGT-GGGGG----------------------------------------------------GG--TCCATGTGTAG-GA----- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6911 75 + 55620 GGGAGGGCAGGCCATGTGAGTGGGCTAAAGTGGGCAGGGTCCTCAGGCAGAAAGT-GGGGG----------------------------------------------------GG--TCCACGTGTAG-GA----- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794903 73 - 123690457 GGGAGGGCAGGCCATGTGGGTGGGCTAAAGTGGGCAGGGTCCCCAGGCAGAAAGT-GGGGG--------------------------------------------------------TCCATGTGTAG-GA----- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305613 58 - 204787373 GGGAGGGCAGGCCATGTGGGT---------------GGGTCCCCAGGCAGAAAGT-GGGGG--------------------------------------------------------TCCATGTGCGG-GA----- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113724 58 - 19675229 GGGAGGGCAGGCCATGTGGGT---------------GGGTCCCCACGCAGAAAGT-GGGGG--------------------------------------------------------TCCATGTGCGG-AA----- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16346428 58 - 16847902 GGGAGGGCAGGCCATGTGGGT---------------GGGTCCCCAGGCAGAAAGT-GGGGG--------------------------------------------------------TCCATGTGCGG-GA----- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91313358 58 + 91754291 GGGAGGGCAGGCCATGCGGGT---------------GGGTCCCCAGGCAGAAAGT-GGGGG--------------------------------------------------------TCCATGTGCGG-GA----- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1370112 58 + 1977891 GGGAGGGCAGGCCATGTGGGT---------------GGGTCCCCAGGCAGAAAGT-GGGGG--------------------------------------------------------TCCATGTGCGG-GA----- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7325256 74 - 7796314 GGGAGGGCAGGCCATGTGGGTGGGCTAAAGTGGGCAGGGTCCCCAGACAGAAAGTGGGGGG--------------------------------------------------------TCCATGTGCGC-AA----- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73799041 70 + 74750902 GGGAGGGTAGGCCATGTGGGTGGGCTAAAGTGGGCAGGATCCCCAGGCAGAAG----GAAG--------------------------------------------------------TCCATGGGTGG-GA----- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17250321 72 - 17725628 GGGAGGGAAGGCCACGTGGGTGGGCTAAAGTGGGCAGGATCCCCAGGCCGAAGGC-AGGAG--------------------------------------------------------CCCAT-GGTGG-GA----- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6338253 73 + 6778120 GGGAGGGAAGGCCATGTGGGTGGGCCAATGTGGGCAGGATCCCCAGGCAGAAAGA-GGGAG--------------------------------------------------------CCCATGGGTGG-GA----- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 13447 73 - 21398 GGGAGGGTAGGCCATGTGGGAGGGCTAAAGTGGGCAGGATCCCCAGGCAGAAAGA-GGGAG--------------------------------------------------------TCCCTGGGTGG-GA----- i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 178223 78 + 608964 AGAGGGATGGTTAACGTGGGTGGACTAAAGTGAGCAGGATCCCCAAGCAGAAAGT-GGGGC----------------------------------------------------GTCCCTCAGGGGTGGTGA----- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32760844 122 + 98207768 GTACCGGTAG---ACATGGGC--AACGAAGTGATAAGCATCCCCATGAAGGAAGC-GGGGACCCCTTAGGGcagcaattttcaatcctgctaatgctgtgagcctttaatatggt--tccttgtgttg-ta----- i mm10.chr16 I 4 C 0 s dasNov3.JH569502 2670744 77 - 6579706 GGAATGATGTGCAGCGTGGGTAGACTGAGGTGAGGGGGATCACCGTGCATAATGT-GGGGC--------------------------------------------------------TCTGT-TGGGG-TATTGAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14768409 143 - 22200726 I e micMur3.chr1 88358029 72 + 114275543 I e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=49761.000000 s hg38.chr3_KI270934v1_alt 24320 3 + 163458 GTG s panTro5.chr3 2486580 3 - 202621043 GTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85015 3 - 190779 GTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6986 3 + 55620 GTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794976 3 - 123690457 GTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305671 3 - 204787373 GTG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113782 3 - 19675229 GTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16346486 3 - 16847902 GTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91313416 3 + 91754291 GTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1370170 3 + 1977891 GTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7325330 3 - 7796314 GTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73799111 3 + 74750902 GTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17250393 3 - 17725628 GTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6338326 3 + 6778120 GTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 13520 3 - 21398 GTG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 178301 3 + 608964 GTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32760966 3 + 98207768 gtg i mm10.chr16 C 0 I 177 s canFam3.chr33 2294805 3 - 31377067 GTG i canFam3.chr33 I 5 C 0 s dasNov3.JH569502 2670821 3 - 6579706 GTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14768409 143 - 22200726 I e micMur3.chr1 88358029 72 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M a score=176859.000000 s hg38.chr3_KI270934v1_alt 24323 13 + 163458 GGACCCTCGTTGG s panTro5.chr3 2486583 13 - 202621043 GGACCCTCGTTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85018 13 - 190779 GGACCCTCGTTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 6989 13 + 55620 GGACCCTCGTTGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794979 13 - 123690457 GGACCCTCGTTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305674 13 - 204787373 GGACCCTCGTTGG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113785 13 - 19675229 GGACCCTCGTTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16346489 13 - 16847902 GGACCCTCGTTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91313419 13 + 91754291 GGACCCTCGTTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1370173 13 + 1977891 GGACTCTCGTTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7325333 13 - 7796314 GGACCCTCGTTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73799114 13 + 74750902 GGACCCTCGTTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17250396 13 - 17725628 GGACCCTCGCTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6338329 13 + 6778120 GGACCCTCGTTGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 13523 13 - 21398 GGACCCTCGTGGG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88358101 13 + 114275543 GGACCCTCATTTC i micMur3.chr1 I 72 C 0 s otoGar3.GL873829 178304 13 + 608964 GGGCCCTCATTTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32761146 13 + 98207768 GGACCCTCACTTC i mm10.chr16 I 177 C 0 s canFam3.chr33 2294808 13 - 31377067 GGACCCTCATTTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2670824 13 - 6579706 AGGCTCCCATTCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14768409 143 - 22200726 I e macFas5.chr2 192362332 14732 - 192460366 M a score=4053514.000000 s hg38.chr3_KI270934v1_alt 24336 277 + 163458 CTTGTTTTCATCTGCCCTCCTTTCCTAGGAATACGAGACGTTCTATGGTGAACACAGCCTGCTAGTCCAGCAGGCCGAGTCTTGGATTAGAAAGATGACAAACAACGGGGGCTACAAGGCCAGGTGGGCCCTAAAGGTCACGTGGGTCAATGCCCACGCCTATCCTGCCCAGTGGACCCTC-----------------GGGGTGAGTAGACCCCTGGGCAGCTCCCA-GGAGCTATCTGGGAGTCAGACATCCTAGAATCCTAGGCAGGGGCCACTCTTCCAAAATCCTCTCTGG s panTro5.chr3 2486596 277 - 202621043 CTTGTTCTCATCTGCCCTCCTTTCCTAGGAATACGAGACGTTCTATGGTGAACACAACCTGCTAGTCCAGGAGGCCGAGTCTTGGATTAGAAAGATCACAAACAACGGGGGCTACAAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCAATGCCCACGCCTATCCTGCCCAGTGGACCCTC-----------------GGGGTGAGTAGACCCCTAGGCAGCTCCCA-GGAGCTATCTGGGAGTCAGACATCCTGGAATCCTAGGCAGGGGCCACTCTTCCAAAATCCTCTCTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85031 277 - 190779 CTTGTTCTCATCTGCCCTCCTTTCCTAGGAATACGAGACGTTCTATGGTGAACACAGCCTGCTAGTCCAGGAGGCCGAGTCTTGGATTAGAAAGATCACAAACAACGGGGGCTACAAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCAATGCCCACGCCTATCCTGCCCAGTGGACCCTC-----------------GGGGTGAGTAGACCCCTAGGCAGCTCCCA-GGAGCTATCTGGGAGTCAGACATCCTGGAATCCTAGGCAGGGGCCACTCTTCCAAAATCCTCTCTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 7002 276 + 55620 CTTGTTCTCATCTGCCCTCCTTTCCTAGGAATACGAGACGTTCTATGGTGAACACAGCCTGCTAGTCCAGGAGGCCGAGTCTTGGATTAGAAAGATCGCAAACAACGGGGGCTACAAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCAATGCCCACGCCTATCCTGCCCAGTGGACCCTC-----------------GGGGTGAGTAGACCCGTGGGCAGCTCCCA-GGAGCTATCT-GGAGTCAGACATCCTAGAATCCTAGGCAGGGGCCACTCTTCCAAAATCCTCTCTGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2794992 277 - 123690457 CTTGTTCTCATCTGCCCTCCTTTCCTAGGAATACGAGACGCTCTATGGTGGACACAGCCTGCTAGTCCAGGAGGCCGAGTCTTGGATTAGAAAGATCACAAACAACAGGGGCTACAAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCAATGCTCACGCCTATCCTGCCCAGTGGACCCTC-----------------GGGGTGAGTAGACCCGTGGGCAGCTCCTG-GGAGCCATCTGGGAGTCAGACATCCTAGAATCCTAGGCAGGGGCTACTCTTCCAACATCCTCTCTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305687 278 - 204787373 CTTGTTCTCATCTGCCCTCCTTTCCTAGGAATACAAGACGCTCTATGGTGAACGCAGGCTGCCAGTCCTGCAGACCGAGTCTTGGATTAGAAAGATCACAAACAATGGCGGCTTCAAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCAATGCCCACGCTTATCCTGCCCAGTGGACCCTT-----------------GGGGTGAGTAGACCCGTGGGCAGCTCCCAGGGAGCCATCTGGGGGTTAGACATCCTAGAATCCTAGGCAGGGGCTACTCTTCCAAAATCCTCTCTGG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19113798 278 - 19675229 CTTGTTCTCATCTGCCCTCCTTTCCTAGGAATACGAGACGCTCTATGGTGAACGCAGGCTGCCAGTCCTGCAGACTGAGTCTTGGATTAGAAAGATCACAAACAATGGCGGCTTCAAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCAATGCCCACGCTTATCCTGCCCAGTGGACCCTC-----------------GGGGTGAGTAGACCCGTGGGCAGCTCCCAGGGAGCCATCTGGGGGTCAGACATCCTAGAATCCTAGGCAGGGGCTACTCTTCCAAAATCCTCTCTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16346502 278 - 16847902 CTTCTTCTCATCTGCCCTCCTTTCCTAGGAATACGAGACGCTCTATGGTGAACGCAGGCTGCCAGTCCTGCAGGCCGAGTCTTGGATTAGAAAGATCACAAACAATGGCGGCTTCAAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCAATGCCCACGCTTATCCTGCCCAGTGGACCCTT-----------------GGGGTGAGTAGACCCGTGGGCAGCTCCCAGGGAGCCATCTGGGAGTCAGACACCCTAGAATCCTAGGCAGGGGCTACTCTTCCAAAATCCTCTCTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91313432 278 + 91754291 CTGGTTCTCATCTGCCCTCCTTTCCTAGGAATACGAGACGCTCTATGGTGAACGCAGCCTGCCAGTCCTGCAGGCCGAGTCTTGGATTAGAAAGATCACAAACAATGGCGGCTTCAAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCAATGCCCACGCCTATCCTGCCCAGTGGACCCTC-----------------GGGGTGAGTAGACCCGTGGGCAGCTCCCAGGGAGCCATCTGGGAGTCAGACATCCTAGAATCCTAGGCAGGGGCTACTCGTCCAAAATCCTCTCTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1370186 278 + 1977891 CTTGTTCTCATCTGCCCTCCTTTCCTAGGAATACGAGACGCTCTACGGTGAACGCAGGCTGCCAGTCCTGCAGGCCGAGTCTTGGATTAGAAAGATCACAAACAATGGCGGCTTCAAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCAATGCCCACGCCTATCCTGCCCAGTGGACCCTC-----------------GGGGTGAGTAGACCCGTGGGCAGCTCCCAGGGAGCCATCTGGGAGTCAGACATCCTAGAATCCTAGGCAGGGGCTACTCTTCCAAAATCCTCTCTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7325346 278 - 7796314 CTTGTTCTCATCTGCCCTCCTTTCCTAGGCATACGAGACACTCTATGGTGAACACAGCCTGCCAGTCCTGCAGGTGGAGTCTTGGATTAGAAAGATCACAAACAATGGTGGCTTCAAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCGATGCCCACGCCTATCCTGCCCAGTGGACCCTC-----------------GGGGTGAGTAGACCGGTGGGCAGCTCCCAGGGAGCCATCTGGGAGTCAGACATCCTAGAATCCTAGGCAGGGGCTACTCTTCCAACATCCTCTCTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73799127 278 + 74750902 CTTGTTCTCATCTGCTCTCCTTTCCAAGGAATATGAGACGCTCTACGGTGAACACAACCCACTAGTCCTGCAGGCTGAGTCTTGGATTAGAAAGATTACAAACAACGGGGACTACAAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCAGTGCCCACGCCTATCCTGCCCAGTGGAGCCTC-----------------GGGGTGAGTAGATCCGTGGACAGCTCCCTGGGAACCATCTGGGAGTCAGACATCCTCAAATTCTAGGCAGAGGCTACTCTTCCGAAGCCCTCTCTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17250409 278 - 17725628 CTTGTTCTCATCCACTCTCCTTTCCCAGGAATACGAGACGCTGTACGGTGAACACAACCCGCTAGTCCTGCAGACCGAGTCTTGGATTAGAAAGATCACAAGCAACGGGGACTATGAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCGGCGCCCATGCCTATCCTGCCCAGTGGAGCCTC-----------------GGGGTGAGTGGGCCCATGGACAGCTCCCTGGGAGCCATCTGGGACTCAGACAGCCTCCAATCCTAGGCAGGGGCTACTCTTCCAAGGCCCGCTCCTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6338342 278 + 6778120 CTTGTTCTCATCTGCTCTCCTTTCCCAGGAATACGAGACGCTCTACGGTGAAGCCAGCCCGCTAGTCCTGCAGACCGAGTCTTGGATTAGAAAGATCACAAACAACGGGCACTACAAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCGGTGCCCATGCCTATCCTGCGCAGTGGAGCCTC-----------------GGGGTGAGTCGACCCGTGGACAGCTCCCTGGGAGCCATCCGGGACTCAGACATCCTCGAATTCTAGGCAGGGGCTACTCTTCCAAAGCCCTCTCTGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 13536 278 - 21398 CTTGTTCTCATCTGCTCTCCTTTCCTAGGAATACGAGACGCTGTACGGTGAACACAACCTGCTAGTCCTGCAGGCCGAGTCCTGGATTAGAAAGATGACAAACAACGGGGACTACAAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCAGTGCCCACGCCTATCCTGCCCAGTGGAGCCTC-----------------GGGGTGAGTAGACCCGCGGACAGCTCCCTGGGAGCCATCTGGGAGTCAGACATCCGCGAATTCTAGGCAGGGGCTGCTCTTCCAAAGCCCTCTCTGG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88358114 295 + 114275543 CTTGTTCTTATCTGCCTTCCTTTCCTAGGAATACGTGACACTCTATGGTGAATATCACCCACTAGTCCGGCAGGTGGAGTCTTTGATTAAAAAGTTCACAAACTCCAAGGACTACAAAGCCAGGTGGACCCTGAAGGTCACGTGGGTCAATGCCCCCGCCTACCCCGCCAAGTGGACCTTCGGGGTGAGTGGATCCTTGGGGTGAGTGGACCCACAGACAGCTCCCCATGAGCCATCTGGGAGTCAGACATTCTAGAGTCCTAGGCAGGGGCTACTCTTCTACAATCCTCTCTGG i micMur3.chr1 C 0 I 635 s proCoq1.NW_012133858v1 14768552 276 - 22200726 CTTGTTCTTATCTGCCTTCCTTTCCTAGGAATATGTGACACTCTATGATGAACATTACCCACTAGTCCAGCAGGTGGAGTCTTTGATTAATAAGTTCACAAACTCCTGGGACTACAAAGCCAGGTGGACCCTGAAGGTCACGTGGGTTAATGCCCCCGCCTACCCCGCAGATTGGACCTTC-----------------AGGGTGAGTGGACCCACGGACAGCTCCCTGTGAGCCATCTGGGAGTCAGACATCCCAGAATCCTGGGCAGGGGCTACTCTTCTAAAAGCCTCTCC-- i proCoq1.NW_012133858v1 I 143 C 0 s otoGar3.GL873829 178317 276 + 608964 CTTGTTCTTGCCTGCCTTCCTTTCCTAGGAATATGAGACACTCTATGACGGATATAACCCACTAGTTCTGCAGGTGGAGTCTTGGATTAAAAAGTTCACAAACACCTGGCACTACAAAGCCAGGTGGACCTTGAAGGTCACATGGGTCAATGCCCCTGCCTATCCTGCCAAGTGGACCTTC-----------------GGGGTGAGTGGACCCATGGACAGCTCCC--TGAGCTGGCTGGGACTCATGCATTCTAGAATCCTAGGCAGGGTCTACTCTTCTAAAATCCTCTCTGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32761159 276 + 98207768 CTTGTTCTTACCTACCTTCCTTTCCTAGGAATATGTCACATTTTACAATGAACACCATCAGCTAATCCGGGAAGTGGAGACTTTGATTAATGATTTCACAAGTAGCTGGGGCTACAGAGCCAAGTGGACACTGAAGGTCACCTGGGTCAATGTTCCTGCCTATACTGCCCAAGAGAGCTTT-----------------GGGGTGAGTGGATCATGGAACGGCTCCTG-TGGCCCTTTTGGGAGTCGAACATACCATTATCCTATGTGGGAGCTATCTTTTCAAGA-CCACCCTGG i mm10.chr16 C 0 C 0 s canFam3.chr33 2294821 256 - 31377067 CTTGCCTTC-TCTGCCTTCCTTTCCCAGGAATATGACACGCTCTATCGTGAACACAACCTGCTAGTCCAGCAGGTGGAGTCTTGGATTAATAAATTCACTGACACCAGGAACTACAAAGCCGAGTGGACCCTAAAGGTCACCTGGGTCAATGCCCCTGCCTATCCTGCCGGGCGGACCTTC-----------------GGGGTGAGTGGACCAAAGGACAACTCCCTGCGAACCATCTGGAAGTCATACGTCCTGGAACCCTAGGCAGGG-------TTCC-------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2670837 266 - 6579706 CTTGCCCTTACCTGTCTTCCTTTCTTAGGAATATGAGACTCTTCATAATGACCACCACCCGCTAGTGCAGCAGGTGGAGTCTTGGATTAAAAAGTTCACAAACGCCTGGTACTACAAAGCCAGGTGGACCCTAAAGATTACGTGGGCCGACGCCCCTGCCTATCCCGCCCACAGGACCTTG-----------------GGGGTAAGTGGACCAATGGGCA------------CTATCCGGAAGTCAGTCAGCCTAGAATCCCCAGCAGGGGTCACTCTTCTACAATCCTCTCTGG i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M a score=1796398.000000 s hg38.chr3_KI270934v1_alt 24613 209 + 163458 CTCTAG-GAAAGATTGCTAATTATAGCAAGCCC--------CCCCACCGCCACCC-CCCCACTGCC----------------Accactgttggctgagcactcaccgtgggcccggcctgtctcggccctttgcctacttgacctcacagcagcccagcaaaccggg-tattattaggctgaaacatagcaagtggcatttttgtaagtcaaaaatgtctggctat---tcacaatttc s panTro5.chr3 2486873 225 - 202621043 CTCTAG-GAAAGATTGCTAATTATAGCAAGccc--------ccccaccgccaccc-ccccactgcccccccccaccACTGCCAccactgttggctgagcactcactgtgggcccggcctgtctcggccctttgcctacttgacctcacagcagcccagcaaaccggg-tattattaggctgaaacatagcaagtggcatttttgtaagtcaaaaatgtctggctat---tcacaatttc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85308 225 - 190779 CTCTAG-GAAAGATTGCTAATTATAGCAAGccc--------ccccaccgccaccc-ccccactgccccccgcccccACTGCCAccactgttggctgagcactcactgtgggcccggcctgtctcggccctttgcctacttgacctcacagcagcccagcaaaccggg-tattattaggctgaatcatagcaagtggcatttttgtaagtcaaaaatgtctggctat---tcacaatttc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 7278 209 + 55620 CTCTAG-GAAAGATTGCTAATTATAGCAAGTCC--------CCCCACTGCCACCC-CCCCACTGCC----------------Accactgttggctgagcactcaccgtgggcccggcctgtctcggccctttgcctacttgacctcacagcagcccagcaagtcggg-tattattaggctgaaacatagcaagtggcatttttgtaagtcaaaaatgtctggctat---tcacaatttc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2795269 190 - 123690457 CTCTAG-GAAAGATTGCTAATTACAGCAAG----------------------------CCACTGCC----------------Accactgttggctgagcactcaccgtgggcccggcctgcctcggccctttgcctacttgacctcactgcagcccagcaaactggg-tattattaggctgaaacatagcaagtggaatttttgtaagtcaaaaatgtctggctat---tcgcaatttc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2305965 206 - 204787373 CTCTAG-GAAAGATTGCTAATTATAGC-AGCCC--------ACCCACTGCCA--C-CCCCGCTGCT----------------CCCACTGCTGGCGgagcactcactgtgggcctggccggcctcagccctttgcctacttgacctcactgcagcccagcaaaccaga-tattattaggttgaaacatagcaagtggcatttttgtaagtcaaaaatgtctggctgt---tgggaatttc i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19114076 206 - 19675229 CTCTAG-GAAAGATTGCTAATTATAGC-AGCCC--------ACCCACTGCCA--C-CCCCGCTGCT----------------CCCACTGCTGGCGGAGCACTCACTGTGGGCCCGGCCGGCCTCAGCCCTTTGCCTACTTGACCTCACTGCAGCCCAGCAAACCAGA-TATTAttaggttgaaacatagcaagtggcatttttgtaagtcaaaaatgtctggctat---tgggaatttc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16346780 207 - 16847902 CTCTAG-GAAAGATTGCTAATTACAGC-AGCCC--------ACCCACTGCCA-CC-CCCCGCTGCT----------------CCCACTGCTGGCGGAGCACTCACTGTGGGCCCGGCCGGCCTCAGCCCTTTGCCTACTTGACCTCACCACAGCCCAGCAAACCAGA-TATCAttaggttgaaacatagcaagtggcatttttgtaagtcaaaaatgtctggctat---tgggaatttc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91313710 207 + 91754291 CTCTAG-GAAAGATTGCTAATTACAAC-AGCCCACCCGCTGACCCACTGCCA-CC-CGCCGCTGCT----------------CCCACTGCTGGCGgagcactcgctgtgggcccggcccgcctcagccctttacctgcttgacctcacc--------gcaaactgga-tattattaggttgaaacatagcaagtggcgtttttgtaagtcaaaaatgtctggctat---tgggaatttc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1370464 207 + 1977891 CTCTAG-GAAAGATTGCTAATTATAGC-AGCCC--------ACCCACTGCCA-CC-CCCCGCTGCT----------------CCCACTGCTGGCAgagcactcactgtgggcccggccggcctcagccctttgcctacttgacctcaccacagcccagcaaaccaga-tatcattaggttgaaacctagcaagtggcatttttgtaagtcaaaaatgtctggctat---tgggaatttc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7325624 208 - 7796314 CTCTAG-GAAAGATTGCTAATTATAGCAAGCCC--------ACCCACTGCCA-CC-CCCAGCTGCT----------------Cccactgttggctgagcactcactgtgggcccggcctgcctcagccctttgcctacttgacctcacagcagcccagcaaaccggg-tattattaggtcgaaacatagcaagtggcatttttgtaagtcaaaaatgtctggctat---tgggaatttc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73799405 191 + 74750902 CTCTAG-GAAAGACTGCTAATTACAGCAAGCCC--------ACC-----CCACCCTGCTTACCGCC----------------ACCACTGTTGGCCGAGCACTCACCGT------GGCCTGCCTCGGCCCTTTGcctatttgacctc--------tcagcaaaccagg-tgtcattaggttgaaacacagtaggtggcatttctgtaagtcaaaaatgtctggctat---tggcaatttc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17250687 173 - 17725628 CTCCAG-GAAAGATTGCTAGTCATAGCAAGCCC--------GCC-----CCACCC-GCCCACTG-C----------------ACcgctgttggctgagca---------------------cttggccctttgcctatttg-cctc--------ccagcaaaccagg-tgttattaggttgaaacatagcaagtggcatttctgtaagtcaaaaatgtctggctat---cggcagtttc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6338620 190 + 6778120 CTCCAG-GAAAGATTGCTGACCATAGCAAGCCC--------AGT-----CCACCC-GCCCACTGCC----------------ACCACCGTTGGCTGAGCTCTCACCGT------GGCCTGCCTCGGCCCTTTGCCTATTTGACCTC--------CCAGCAAACCAGG-TGTTAttaggttgaaacatagcaagtggcatttctgcaagtcaaaaatgtctggctat---tggcaatttc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 13814 191 - 21398 CTCCAG-GAAAGATTGCTAATTATAGCAAGCCC--------GCC-----CCACCCCGCCCACTGCC----------------ACCGCTGTTGGCTGAGCACTCACCGT------GGCCGGCCTCGGCCCTTTGCCTATTTGACCTC--------CCAGCAAACCAGG-TGTTAttaggttgaaacatagcaagtggcctttctgtaagtcaaaaatgtctggctat---tggcaatttc i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 14768828 187 - 22200726 -----G-GAACCATTGCTGGTTATGGCAA-------------------------C-CCCTGCCGCT----------------gccaccgtttgctgagcactcaccatgggccaggcctgcctcagctgttcacttacttgaccttgtagcagcccagcaaactagg-tattGttaggttgaaacataggatatggcatttttgtaagtcagaaatatctgactat---tggcaatttc i proCoq1.NW_012133858v1 C 0 I 385 s otoGar3.GL873829 178593 185 + 608964 CTCTAG-GAACCACTGCTGATTACAGCAA-------------------------C-CCCTGCCACT----------------ACCCCCATTGGGTGGGCCCTCA-------CCAGGCCTGCTTCAGCCATTCACTTGCCTGACCTCACAGCAGCCCACCAAACCAGG-TATTGttaggctgaaacacaggaaatggcatttctgtaagtcagaaatgtctggctat---tggcgatttc i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32761435 135 + 98207768 CTGGAGAAAAAAATTGCTGCTTATAGT-ATCCC--------------------TC--------GAG----------------AGCATGGTCTACTGAGTGCCCACAGTGGGCCAGGCCTGCCTT-----------------ACGTCA---------------------------------GAAACA---ACAGCTGCGTTTAC---AGGCAAGAATGTCTGGTGAC---TGACGACTTC i mm10.chr16 C 0 C 0 s canFam3.chr33 2295077 110 - 31377067 -----------------------------------------------------CT-GCCTCCCCCC----------------CACCCTGTTTGCTGAGCACTCACCGA---------------------------TAC--------------------------------TCACTGGTTTAAAACATAGGAAATGGAATTTTTGTAAGTCAGAAGTGGCTGCCAGTAGCCGGCCATTTT i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 2671103 189 - 6579706 CCCAAG-AAAGGACTGCCGACTG-AGTAAACAC---------------------C--------ACC----------------Accactgtttgctgagcacgtcccacaggccagacctgcctcagcccctcacttacattatcttacggcagtccagcgcaggagactattattaggttgaaacatagagaacagaatttttgtaggtcaaaaatggttgactat---tagcaattcc i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88358409 635 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M a score=80912.000000 s hg38.chr3_KI270934v1_alt 24822 7 + 163458 acgtggc s panTro5.chr3 2487098 7 - 202621043 acgtggc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85533 7 - 190779 acgtggc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 7487 7 + 55620 atgtggc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2795459 7 - 123690457 atgtggc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2306171 7 - 204787373 atgtggc i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19114282 7 - 19675229 atgtggc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16346987 7 - 16847902 atgtggc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91313917 7 + 91754291 atgtggc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1370671 7 + 1977891 atgtggc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7325832 7 - 7796314 ctgtgac i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73799596 7 + 74750902 acgtggc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17250860 7 - 17725628 atgtggc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6338810 7 + 6778120 acgtggc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 14005 7 - 21398 atgtggC i aotNan1.NW_018492867v1 C 0 I 210 s otoGar3.GL873829 178778 7 + 608964 atatagc i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32761570 7 + 98207768 ATATGCC i mm10.chr16 C 0 C 0 s canFam3.chr33 2295189 7 - 31377067 AGATGGC i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 2671292 7 - 6579706 atatggt i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14769015 385 - 22200726 I e micMur3.chr1 88358409 635 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M a score=68210.000000 s hg38.chr3_KI270934v1_alt 24829 9 + 163458 tcagtctgg s panTro5.chr3 2487105 9 - 202621043 tcagtctgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85540 9 - 190779 tcagtctgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 7494 9 + 55620 tcagtctgg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2795466 9 - 123690457 tcaatctgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2306178 9 - 204787373 tcaactggg i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19114289 9 - 19675229 tcaacTagg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16346994 9 - 16847902 tcaacTGgg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91313924 9 + 91754291 tcaactggg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1370678 9 + 1977891 tcaactggg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7325839 9 - 7796314 tcaacTGgg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73799603 9 + 74750902 tcaatctgg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17250867 9 - 17725628 tccatctgg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6338817 9 + 6778120 tcaatctgg i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 178785 9 + 608964 tcaatctga i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32761577 9 + 98207768 TTACACGAG i mm10.chr16 C 0 I 538 s canFam3.chr33 2295196 9 - 31377067 TCAACCTga i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2671299 9 - 6579706 tcagtctga i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14769015 385 - 22200726 I e aotNan1.NW_018492867v1 14012 210 - 21398 I e micMur3.chr1 88358409 635 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M a score=1441356.000000 s hg38.chr3_KI270934v1_alt 24838 175 + 163458 tattatg----ctccccattttacagatgaggaagacaatggttagagaggttaagtaactcgttcagagtcacgccactggcaaatggcaaagccaggcctg-agtggagcttcttctgactccagcctctggctctGAAGCACAGGCTCATCCAAC--GGGCACAGGGTGCGCCACACCA s panTro5.chr3 2487114 175 - 202621043 tattatg----ctccccattttacagatgaggaagacaatggttagagaggttaagtaacttgttcagagtcacgccgctggcaaatggcaaagccaggcctg-agtggagcttcttctgactccagcctctggctcttAAGCACAGGCTCATCCAGC--GGGCACAGGGTGCACCACACCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85549 175 - 190779 tattatg----ctccccattttacagatgaggaagacaatggttagagaggttaagtaacttgttcagagtcacgccgctggcaaatggcaaagccaggcctg-agtggagcttcttctgactccagcctctggctcttAAGCACAGGCTCATCCAGC--GGGCACAGGGTGCACCACACCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 7503 175 + 55620 tattatg----ctccccattttacagatgaggaagacaatggttagagaggttaagtaacttgttcagagtcatgccgctggcaaatggcaaagccaggcctg-agtggagcttcttctgactccagcctctggctcttAAGCACAGTCTCATCCAAC--GGGCACAGGGTGCACCACACCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2795475 176 - 123690457 tattatg----atccccattttacagatgaggaagacaatggttagagaggttaagtaacttgttcaaagtcacgctgctggcaaatggcaaagccaggcctgcagtggagcttcttctgactccagcctctggctcttAAGCACAGGCTCATCCAGT--GGGCACGGGGCACACCACACTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2306187 175 - 204787373 tattctg----atccacattttacagatgaggaagacaatggttagagaggttaagtaacttgctcaaagtcatgccact-gcaaatggcaacgccaggcctgcagtggagcttcttctgactccaGCCTCTGGCCATTAAGCATGGGCTCATCCAAC--GGGCATGGGGCACACCACACCA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19114298 175 - 19675229 tattctg----atccacattttacagatgaggaagacaatggttagagaggttaagtaacttgctcaaagtcatgccact-gcaaatggcaacgccaggcctgcagtggagcttcttctgactccagcctctggccattaagcacGGGCTCATCCAAC--GGGCATGGGGCACACCACACCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16347003 175 - 16847902 tattctg----atccacattttacagatgaggaagacaatggttagagaggttaagtaacttgctcaaagtcacgccact-gcaaatggcaacgccaggcctgcagcggagcttcttctgactccagcctctggccattaagcacGGGCTCATCCAAC--GGGCATGGGGCACACCACACCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91313933 175 + 91754291 tattctg----atccacattttacagatgaggaagacaatggttagagaggttaagtaacttgctcaaagtcatgccactggaaaatggcaacgccaggcctgcagtggagcttcttctgactccaGCCTC-GGCCGTTAAGCACGGGCTCATCCAAT--GGGCATGGGGCACAGCACACCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1370687 175 + 1977891 tattctg----atccacattttacagatgaggaagacaatggttagagaggttaagtaacttgctcaaagtcatgccact-gcaaatggcaacgccaggcctgcagcggagcttcttctgactccaGCCTCTGGCCATTAAGCACGGGCTCATCCAAC--GGGCATGGGGCACACCACACCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7325848 176 - 7796314 tattgtg----atccacactttacagacgaggaagacaatggttagagaggttaagtaacttgctcaaagtcatgccactggcaaagggcaacgccaggcctgcagcggagcttcttctgactccagcctctggccgttaagcacAGGCTCATCCAAT--GGGCATGGGGCACACCACACCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73799612 171 + 74750902 gattctt----atccacattatagggtggaggccgaccgtggtcagagagatt-aataacttgctc--agtcacgaa----gcagatggcagagccaggcctgcagtggaggttcttctgactccagcctctggctcttaagcacaaagccattcagtTTTGACATGGGGCTCCTGGCGCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17250876 175 - 17725628 tattatt----atccacattttagggatgaggcagatggtggttagagagatt-agtaacttgctc--agtcacgaagccggcaaatggctatgccaggcctggcgtggaggctcttctgactccagcctctggctcttAAGCACAAGGCCATTCAACTTTGACATGGGGCTCATGGCGCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6338826 174 + 6778120 tattatt----atccacattttagggatgaggcagacaatggttagagagatt-agtagcttgctc--agtcacgaagct-acaaatggcaaagccaggcctggagtggaggttcttctgactgcagcctctggctcttaagcacaaggccattcagtTTTGACATGGGGCTCATGGCGCCC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 178794 179 + 608964 TATTAAAtagcatctgcattttagcaatgaggaagacaacggttagggaggataaacaacttgttcaaggtcacccccctagcaagtgacaaagccaggcctgaaatggagggt-ttttgactctaagctctggcttttAACCATGGTGCCTCCCGGT--GGGAATGGGGCACACCACACAA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2295205 174 - 31377067 tattatt----atccacgttttagagatgaggaggatgacggtgagagaggttagacaatctgctcaaggtcacccagctagaaagtgacaaagccaggcttggaatggaggct-ttctgacttccaactccagctctcagctgcaAAGCCAGCCAGT--GGCCAT-GGTCACAGCACACAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2671308 176 - 6579706 tattagt----atccacattttagagaagaggaaggtgacggttagagagggtaggcaacttactgaaggtcccccagctagcaaatgacaaagccaggtttggaacagaggtttttctgactccaaactctggctcttAATCACAGTGTCATCCAAT--GGAAATGGGACACACCccacaa i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14769015 385 - 22200726 I e mm10.chr16 32761586 538 + 98207768 I e aotNan1.NW_018492867v1 14012 210 - 21398 I e micMur3.chr1 88358409 635 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M a score=534827.000000 s hg38.chr3_KI270934v1_alt 25013 52 + 163458 TCTCCTCTGTCCTCCCTCCGAGGACCCC---GCTCTTGTAGTCACCAAGTTCTTC s panTro5.chr3 2487289 52 - 202621043 TCTCCTCTGTCCTCCCTCCGAGGACCCC---GCTCTTGTAGTCACCAAGTTCTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85724 52 - 190779 TCTCCTCTGTCCTCCCTCCGAGGACCCC---GCTCTTGTAGTCACCAAGTTCTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 7678 52 + 55620 TCTCCTCTGTCCTCCCTCCAAGGACCCC---GCTCTTGTAGTCACCAAGTTCTTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2795651 52 - 123690457 TCTCCTCTGTCCTCCCTCCGAGGACCCC---GCTCTTGTAGTCACCAAGTTCTTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2306362 51 - 204787373 TCTCCTCTGTCCTCCCTCCGAGGA-CCC---Gctcttgtagtcaccaagttcttc i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19114473 51 - 19675229 TCTCCTCTGTCCTCCCTCCGAGGA-CCC---actcttgtagtcaccaagttcttc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16347178 51 - 16847902 TCTCCTCTGTCCTCCGTCCGAGGA-CCC---GCTCTTGTAGTCACCAAGTTCTTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91314108 51 + 91754291 TCTCCCCTGTCCTCCCTCCGAGGA-CCC---Gctcttgtagtcaccaagttcttc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1370862 51 + 1977891 TCTCCTCTGTCCTCCCTCCGAGGA-CCC---Gctcttgtagtcaccaagttcttc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7326024 51 - 7796314 TCTCCCCTGTCCTCCCTCCGAGGA-CCC---ACTCTTATAGTCACCAAGTTCTTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73799783 52 + 74750902 TCCCCTCTGTCCTCCCTCTGCGGACCCC---gctcttgtagtcacaaagttcttc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17251051 52 - 17725628 TCTCCTCTGTCCTCCCTCTCAGGACCCC---GCTCTTGTAGTCACAAAGTTCTTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6339000 52 + 6778120 TCTCCTCTGTCCTCCCTCTGAGGACCCC---ACTCTTGGAGTCACAAGGTTCTTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 14222 52 - 21398 TCTCCTCTGTCCTCCCTCTGAGGACCCC---GCTCTTGTAGTCACAAAGTTCTTC i aotNan1.NW_018492867v1 I 210 I 25 s otoGar3.GL873829 178973 54 + 608964 TCTCCTAAGCCTTTCCTCTGAGGA-CTCAAAGGTCTTACAGTCACAAAGTTCTTC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2295379 40 - 31377067 TGTCCTCAGTCTTCCGCCCGGGGACTCC---GCTCTTACAGCC------------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2671484 54 - 6579706 tctctctagtattccctctgggga-ctcagagctcccacagtgaggaagttcttc i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14769015 385 - 22200726 I e mm10.chr16 32761586 538 + 98207768 I e micMur3.chr1 88358409 635 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M a score=889795.000000 s hg38.chr3_KI270934v1_alt 25065 99 + 163458 CTTATGCCTGGTCTAAAGTCACTCATTTCttcattcactcgacaaaagttcactggtcacctactgtggacaa-----------cgt---gTGC--------------------GCCTTCAGTGAACC-CCAGT s panTro5.chr3 2487341 99 - 202621043 CTTATGCCTGGTCTAAAGTCACTCATTTCttcattcactcgacaaaagttcactggtcacctactgtggacaa-----------cgt---gTGC--------------------GCCTTCAGTGAACC-CCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85776 99 - 190779 CTTATGCCTGGTCTAAAGTCACTCATTTCttcattcactcgacaaaagttcactggtcacctactgtggacaa-----------cgt---gTGC--------------------GCCTTCAGTGAACC-CCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 7730 99 + 55620 CTTATGCCTGGTCTAAAGTCACTCATTTCttcattcactcgacaaaagttcactggtcacctactgtggacaa-----------cgt---gTGC--------------------GCCTTCAGTGAACC-CCAGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2795703 99 - 123690457 CTTACGCCTGGTCTAAAGTCACTCATTTCttcattcactcgacgaaagctcactggtcacctactgtgGACAA-----------CGT---GTGC--------------------GCCTTCAGTGAACC-CCAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2306413 99 - 204787373 cttatgtctgatctaaagtcactcatTTCTTCATTCACTTGACAAAAGTTCACTAGTCACCTACCGTGGACAA-----------CGT---GTGC--------------------ACCTTCAGTGAACC-CCAGT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19114524 99 - 19675229 cttatgcctgatctaaagtcactcatTTCTTCATTCACTTGACAAAAGTTCACTAGTCACCTACCGTGGACAA-----------CGT---GTGC--------------------ACCTTCAGTGAACC-CCAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16347229 99 - 16847902 CTTATGCCTGGTCTAAAGTCACTCATTTCTTCATTCACTTGACAAAAGTTCACTGGTCACCTACCATGGACAA-----------CGT---GTGC--------------------GCCTTCAGCGAACC-CCAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91314159 99 + 91754291 cttatgcctgatctaaagtcactcatTTCTTCATTCACCTGACAAAAGTTCACGGGTCACCTACCACGGACAA-----------CGT---GTGC--------------------GCCTTCAGCGAACC-CCAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1370913 99 + 1977891 cttatgtctgatctaaaGTCACGCATTTCttcattcacttgacaaaagttcactggtcacctaccatgGACAA-----------CGT---GTGC--------------------GCCTTCAGCGAACC-CCAGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7326075 99 - 7796314 CTTATGCCCCATCTAAAGTCACTCATTGCttcattcactcaacaaaagttcactggtcacctaccgtgAACAC-----------CGT---GTGC--------------------GCCTTCAGTGAACC-CCAGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73799835 99 + 74750902 ctcatgcctggcctaaagtcactcatTTCTTCATTCACTCAACAGAAGTTCACCGGTCACCTCCGGCGGACAA-----------GGC---GTGT--------------------GCCTTCAGCAAACC-CCAGT i calJac3.chr17 C 0 I 13 s saiBol1.JH378146 17251103 95 - 17725628 CTCATGCCTGGTCTAAAGTCACTCatttc----ttcactcaacaaaagttcactggtcacctcctgtggacaa-----------ggc---gtgt--------------------gcCTTCAGCAAACC-CCAGT i saiBol1.JH378146 C 0 I 13 s cebCap1.NW_016107444v1 6339052 99 + 6778120 CTCATACCTGGTCTAAAGTTGCTCATTTCttcattcactcaacaaaagttcactggtcacctccagtggacaa-----------ggc---gtgt--------------------gcCTTCAGCAAACC-CCAGT i cebCap1.NW_016107444v1 C 0 I 13 s otoGar3.GL873829 179027 97 + 608964 -CTGTGTCTGGTCTATA-CCACTCATTCCTTCCTTCACGCAACAGAAGTCCATTGATGACCTATTTTCAA-AA-----------GGC---ATGT--------------------GCCTTGGGAGAACCTCCAGT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2295419 109 - 31377067 CCTGTGTGTGGTCTAAAGTCACTCGTTTCCTCATTGGTTCAAC--AAGTTCATTGGTTTCCTACTTTGTACAAGCACAGTGCTTGGC---ATCT--------------------GCCTTCAGAGAGCCTCCAGG i canFam3.chr33 C 0 I 13 s dasNov3.JH569502 2671538 122 - 6579706 ctcacgtctagtctgaagttattcattgcttcatttgttcaacagagattcattgatgacctactctgtacaa-----------agcagagtgcttggcacctagttgggtcctgccttcagagaacc-tccat i dasNov3.JH569502 C 0 I 15 e proCoq1.NW_012133858v1 14769015 385 - 22200726 I e mm10.chr16 32761586 538 + 98207768 I e aotNan1.NW_018492867v1 14274 25 - 21398 I e micMur3.chr1 88358409 635 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M a score=192939.000000 s hg38.chr3_KI270934v1_alt 25164 19 + 163458 GTCATC-CATGCTGTTTAGA s panTro5.chr3 2487440 19 - 202621043 GTCATC-CATGCTGTTTAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85875 19 - 190779 GTCATC-CATGCTGTTTAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 7829 19 + 55620 GTCATC-CATGCTGTTTAGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2795802 19 - 123690457 GTCATC-CATGCTGTTCAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2306512 19 - 204787373 GTCATC-CATGCTGTTCAGG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19114623 19 - 19675229 GTCATC-CATGCTGTTCAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16347328 19 - 16847902 GTCATC-CATGCTGTTCAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91314258 19 + 91754291 GTCATC-CATGCTGTTCAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1371012 19 + 1977891 GTCATC-CATGCTGTTCAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7326174 19 - 7796314 GTCATC-CATGCTGTTCAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73799947 19 + 74750902 GTCATC-CATGCTGTTCAGG i calJac3.chr17 I 13 C 0 s saiBol1.JH378146 17251211 19 - 17725628 GTCATC-CACGCTGTTCAGG i saiBol1.JH378146 I 13 C 0 s cebCap1.NW_016107444v1 6339164 19 + 6778120 GTCATC-CATGCTGTTCAGG i cebCap1.NW_016107444v1 I 13 C 0 s aotNan1.NW_018492867v1 14299 19 - 21398 GTCATC-CATGCTGTTCAGG i aotNan1.NW_018492867v1 I 25 C 0 s otoGar3.GL873829 179124 11 + 608964 CTCACC-TGCCT-------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2295541 19 - 31377067 TCCATC-CACGATATTTAGG i canFam3.chr33 I 13 C 0 s dasNov3.JH569502 2671675 20 - 6579706 GTCCTCACACGCTATTCAGG i dasNov3.JH569502 I 15 C 0 e proCoq1.NW_012133858v1 14769015 385 - 22200726 I e mm10.chr16 32761586 538 + 98207768 I e micMur3.chr1 88358409 635 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M a score=674519.000000 s hg38.chr3_KI270934v1_alt 25183 67 + 163458 TGGAGGAGACAATTTGGGCAATGTCCTT--AAATATCCGCGCGGGAGCTAATGAAGCCTCCTCTCTAGC s panTro5.chr3 2487459 67 - 202621043 TGGAGGAGACAATTTGGGCAATGTCCTT--AAATATCCGCGCGGGAGCTAATGAAGCCTCCTCTCTAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85894 67 - 190779 TGGAGGAGACAATTTGGGCAATGTCCTT--AAATATCCGCGCGGGAGCTAATGAAGCCTCCTCTCTAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 7848 67 + 55620 TGGAGGAGACAATTTGGGCAATGTCCTT--AAATATCCGCGCGGGAGCTAATGAAGCCTCCTCTCTAGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2795821 66 - 123690457 TGGAGGAGACAATTTGGGCAATGTCCTT--AACTATCCGCAAGGGAGCTAATG-AGCCTCCTCTCTAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2306531 67 - 204787373 TGGAGGGGACAATTTGGACAATGTCCTT--AAATATCCGCGAGGGAGCTAACAAAGCCTCCTCTCTAGC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19114642 67 - 19675229 TGGAGGGGACAATTTGGACAATGTCCTT--AAATATCCGCGAGGGAGCTAACAAAGCCTCCTCTCTAGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16347347 67 - 16847902 TGGAGGGGACAATTTGGACAATGTCCTT--AAATATCCGCGAGGGAGCTAACAAAGCCTCCtctctagc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91314277 67 + 91754291 TGGAGGGGACAATTTGGACAATGTCCTT--AAATATCCGCGAGGGAGCTAACGAAGCCTCCTCTCTAGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1371031 67 + 1977891 TGGAGGGGACAATTTGAACAATGTCCTT--AAATATCCGCGAGGGAGCTAACGAAGCCTCCTCTCTAGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7326193 67 - 7796314 TGGAGAGGACAATTTGGACAATGTCCTT--AAATACCCGCGAGGGAGCTAACGAAGCCTCCTCTCTAGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73799966 67 + 74750902 TGGAGGGGACAATTTGGGCAATGTCCTT--AAATGTCCCCCAGGCAGCTAATTAAGTCCCCTCTCGAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17251230 67 - 17725628 TGGAGGGGACAATTTGGGCCATGTCCTT--AAATATCTCCCAGGGAGCTGATTAAGTCCCCTCTCGAGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6339183 67 + 6778120 TGGAGGGGACAATTTGGGCAATGTCCTT--AAATATCCCCCAGGGAGCTAATTAAGTCCCCTCTCGGGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 14318 65 - 21398 T-GAGGGGACAATTTGGGCAGTGTTCTT--AACTATCCCCCAGGGAGCTAATTAAGT-CCCTCTCGAGC i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 14769400 64 - 22200726 TGGAGGCGACAATTTGGACGATGTCCTT--AAATGTCCCCAAGGGAGCTAATTAAGCCTCTCCCTG--- i proCoq1.NW_012133858v1 I 385 C 0 s otoGar3.GL873829 179135 44 + 608964 ------------------CCGTGTCCTC--AAATATCCCCAGGGGAGCTAATTAAGCCTCTCCA----- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2295560 66 - 31377067 TTGAGGGGAC-ATTTGAACAATGTCCTTACAAATATCCCAGAGGAAGCTAAGTAGGCCTC-TCTCGGC- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2671695 63 - 6579706 TTGAGGGTTC-ATTtggacaatgtcttt--aa-tctccctgaggaagctaatttagcctc-tctcagc- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32761586 538 + 98207768 I e micMur3.chr1 88358409 635 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M a score=238065.000000 s hg38.chr3_KI270934v1_alt 25250 15 + 163458 TCTCTGGTATCTTGG s panTro5.chr3 2487526 15 - 202621043 TCTCTGGTATCTTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85961 15 - 190779 TCTCTGGTATCTTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 7915 15 + 55620 TCTCTGGTATCTCGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2795887 15 - 123690457 TCTCTGGTATCTTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2306598 15 - 204787373 TCTCTGGTATCTTGG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19114709 15 - 19675229 TCTCTGGTATCTTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16347414 15 - 16847902 tctctggtatcttgg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91314344 15 + 91754291 TCTCTGGTATCTTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1371098 15 + 1977891 TCTCTGGTATCTTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7326260 15 - 7796314 TCTCCGGTGTCTTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73800033 15 + 74750902 TCTCTGGTATCTTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17251297 15 - 17725628 TCTCTGGTATCTTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6339250 15 + 6778120 TCTCTGGTATCTTGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 14383 15 - 21398 TCTCTGGTATCTTGG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88359044 15 + 114275543 TCTCTGGTGTCTTGG i micMur3.chr1 I 635 C 0 s proCoq1.NW_012133858v1 14769464 15 - 22200726 TCTCTGGTGTCTTGG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 179179 15 + 608964 TCTCTGGTGTCCTGG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2295626 15 - 31377067 TCTCTGGGGTCGTGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2671758 15 - 6579706 tctcttgtgtcctga i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32761586 538 + 98207768 I e macFas5.chr2 192362332 14732 - 192460366 M a score=5429259.000000 s hg38.chr3_KI270934v1_alt 25265 411 + 163458 CTGA--TCTCAGGTTCT-------GGTAGCTTTCTCTAACAAACACTCATCTAACT---GAATTGTAACCCAGAACCCTTTATCTCCCCT-CCTGG------AAGAAAGTCAC-CA-AAAGGCAAATCCACCGT-------------------------------------G-GTAAGTGC-----GTTCGCA--CCCAGGGTGAAAGCTGCCCTCACTGACCCAAAACTTGCCAGCATTTTGGGC-CCATGTCTTT---GCTGTGGGCAGACCAGGAACAG-GTGCTGTGC--GTGTCAGAGCAGGGCTGTGGGACGGGCGGGGGGACA-TAAGAGAGGAGACCCCGGATCTCTCACGGGCATCCCTGTGTTT-TCTTCCACCCACCCCCAGAGCAACACCTACCAAGCCATCCTCTCCACGGACGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGGATGCAGTGGGACGTGGCC s panTro5.chr3 2487541 411 - 202621043 CTGA--TCTCAGGTTCT-------GGTAGCTTTCTCTAACAAACACTCATCTAACT---GAATTGTAACCCAGAACCCTTTATCTCCCCT-CCTGG------AAGAAAGTCAC-CA-AAAGGCAAATCCACCGT-------------------------------------G-GTAAGTGC-----GTTCACA--CCCAGGGTGAAAGCTGCCCTCACTGACCCAAAACTTGCCAGCATTTTGGGC-CCATGCCTTT---GCTGTGGGCAGACCAGGAACAG-GTGCTGTAC--ATGTCAGAGCAGGGCTGTGGGACGGGCGGGGGGACA-TAAGAGAGGAGACCCCGGATCTCTCACGGGCATCCCTGTGTTT-GCTTCCACCCACCCCCAGAGCAACACCTACCAAGCCATCCTCTCCACGGACGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGGATGCAGTGGGACGTGGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85976 411 - 190779 CTGA--TCTCAGGTTCT-------GGTAGCTTTCTCTAACAAACACTCATCTAACT---GAATTGTAACCCAGAACCCTTTATCTCCCCT-CCTGG------AAGAAAGTCAC-CA-AAAGGCAAATCCACCGT-------------------------------------G-GTAAGTGC-----GTTCACA--CCCAGGGTGAAAGCTGCCCTCACTGACCCAAAACTTGCCAGCATTTTGGGC-CCATGCCTTT---GCTGTGGGCAGACCAGGAACAG-GTGCTGTAC--ATGTCAGAGCAGGGCTGTGGGACGGGCGGGGGGACA-TAAGAGAGGAGACCCCGGATCTCTCACGGGCATCCCTGTGTTT-GCTTCCACCCACCCCCAGAGCAACACCTACCAAGCCATCCTCTCCACGGACGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGGATGCAGTGGGACGTGGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 7930 411 + 55620 CTGA--TCTCAGGTTCT-------GGTAGCTTTCTCTAACAAACACTCATCTAACT---GAATTGTAACCCAGAACCCTTTATCTCCCCG-CCTGG------AAGAAAGTCAC-CA-AAAGGCAAATTCACCGT-------------------------------------G-GTAAGTGC-----GTTCACA--CCCAGGGTGAAAGCTGCCCTCACTGACCCAAAACTTGCCAGCATTTTGGGC-CCATGCCTTT---GCTGTGGGCAGACCAGGAACAG-GTGCTGTAC--ATGTCAGAGCAGGGCTGTGGGACGGGCGGGGGGACA-TAAGAGAGGAGACACCGGATCTCTCACGGGCATCCCTGTGTTT-GCTTCCACGCCCCCCCAGAGCAACACCTACCAAGCCATCCTCTCCACGGACGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGGATGCAGTGGGACGTGGCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2795902 453 - 123690457 CTAA--TCTCAGGTTCT-------GGTAGCGTTCTCTTACAAACACTGATGTAACT---GAATTGTAACCCAGAACCCTTTATCTCCCCT-CCTGG------AAGAAAGTCAC-CA-AAAGGCAAATCCACCGTGGTGGATTCACACCCAGGGTGAAAAGTTCACACCCAGG-GTAAGTGTGGTAAGTTCACA--CCCAGGGTGAAAGCTGCCCTCACTGACCCACAACTTGCCAGCATTTTGGGC-CCATGCCTTT---GCTGTGGGCAGACTAGGAACAG-CTGCTGTAC--ATGTCCAAGCAGGGCTGTGGGATGGGTGGGGGGACA-TAAGAGAGGAGACCCCGGATCTCTCACAGGCATCCCTGTGTTT-GCTTCCACCCACCCCCAGAGCAACACCTACCAAGCCATCCTCTCCACGGATGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGAATGCAGTGGGACGTGGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2306613 413 - 204787373 CTGATCTCTCAGGTTCT-------GGTAGCTTTCTCCTGCAAACACTCATCTAACT---GAATTATAACCCAGAACCCTTTATCTCCCTT-CCTGG------AAGAAAGTCAC-CA-AAAGGCAAATCCACTGT-------------------------------------G-GTAAGTGT-----GTTCACA--CCCAGGGTGAAAGCTGCCCTCATTGACCCAAAACTTGCCAGCATTTTGGGC-CCATGCCTTT---GCTGTGGGCAGACCAGGAACAG-GTGCTGTAC--ATGTCCAGGCAGGGCTGTGGGACGGGCGGGGGGACA-TAAGAGAGGAGACCCCGGATCTCTCACGGGCATCCCTGTGTTT-TCTTCCACCCACCCCCAGAGCAACACCTACCAGGCCATCCTCTCCACAGACGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGGATGCAGTGGGACGTGGCC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19114724 414 - 19675229 CTGATCTCTCAGGTTCT-------GGTAGCTTTCTCTTACAAACACTCATCTAACT---GAATTATAACCCAGAACCCTTTATCTCCCTT-CCTGG------AAGAAAGTCAC-CA-AAAGGCAAATCCACTGT-------------------------------------G-GTAAGTAT-----GTTCACA--CCCAGGGTGAAAGCTGCCCTCATTGACCCAAAACTTGCCAGCATTTTGGGC-CCATGCCTTT---GCTGTGGGCAGACCAGGAACAG-GTGCTGTAC--ATGTCCAGGCAGGGCTGTGGGACGGGCGGGTGGACATTAAGAGAGGAGACCCCGGATCTCTCACGGGCATCCCTGTGTTT-TCTTCCACCCACCCCCAGAGCAACACCTACCAGGCCATCCTCTCCACAGACGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGGATGCAGTGGGACGTGGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16347429 413 - 16847902 ctcatctctcaggttct-------ggtAGCTTTCTCTTACAAACACTCATCTAACT---GAATTATAACCCAGAACCCTTTATCTCCCTT-CCTGG------AAGAAAGTCAC-CA-AAAGGCAAATCCATCGT-------------------------------------G-GTAAGTGT-----GTTCACA--CCCAGGGTGAAAGCTGCCCTCATTGACCCAAAACTTGCCAGCATTTTGGGC-CCATGCCTTT---GCTGTGGGCAGACCAGGAACAG-GTGCTGTAC--ATGTCCAGGCAGGGCTGTGGGACGGGCGGGGGGACA-TAAGAGAGGAAACCCCGTATCTCTCACGGGCATCCCTGTGTTT-TCTTCCACCCACCCCCAGAGCAACACCTACCAGGCCATCCTCTCCACAGACGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGGATGCAGTGGGACGTGGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91314359 413 + 91754291 CTAATCTCTCAGGTTCT-------GGTAGCTTTCTCTTGCAAACACTCATCTAACT---GAATTAGAACCCAGAACCCTTTATCTCCCTT-CCCAG------AAGAAAGTCAC-TG-AAAGGCAAATCCACCAT-------------------------------------G-GTAAGTGC-----GTTCACA--CCCAGGGTGAAAGCTGCCCTCATTGACCCAAAACATGCCAGCATTTTGGGC-CCACGCCTTT---GCTGTGGGCAGACCAGGAACAG-GTGCTGTAC--ATGTCCAGGCAGGGCTGTGGGACGGGCAGGGGGACA-TAAGAGAGGAAACCCCGGATCTCTCACGGGCATCCCTGTGTTT-TCTTCCACCCACCCCCAGAGCAACACCTACCAGGCCATCCTCTCCACAGATGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGGATGCAGTGGGACGTGGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1371113 413 + 1977891 CTAATCTCTCAGGTTCT-------GGTAGCTTTCTCTTAGAAACACTCATCTAACT---GAATTATAACCCAGAACCCTTTATCTCCCTT-CCTGG------AAGAAAGTCAC-CA-AAAGGCAAATCCACCGT-------------------------------------G-GTAAGTGT-----GTTCACA--CCCAGGGTGAAAGCTGCCCTCATTGACCCAAAACTTGCCAGCATTTTGGGC-CCATGCCTTT---GCTGTGGGCAGACCAGGAACAG-GTGCTGTAC--ATGTCCAGGCAGGGCTGTGGGACGGGCGGGGGGACA-TAAGAGAGGAAACCCCGGATCTCTCACGGGCATCCCTGTGTTT-TCTTCCACCTACCCCCAGAGCAACACCTACCAGGCCATCCTCTCCACAGACGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGGATGCAGTGGGACGTGGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7326275 413 - 7796314 CTAATCTCTCAGGTCCT-------GGTAGCTTTCTCTTGCAAACACTCATCTAACT---GAATTATAACCCAGAACCCTTTATCTCCCTT-CCTGG------AAGAAAGTCAC-CA-GAAGGCAAATCCACCGT-------------------------------------G-GTAAGTGC-----GTTCACA--CCCAGGGTGAAAGCTGCCCTCACTGACCCAAAACTTGCCAGCATTTTGGGC-TCATGCCTTT---GCTGTgggcagaccaggaacag-gtgctgtgc--atgtcagggcagggctgtgggacgggcggggGGACA-TAAGAGAGGAGACCCCAGATCTCTCACGGGCATCCCTCTGTTT-TCTTCCACCCACCCCCAGAGCAACACCTACCAGGCCATCCTCTCCACAGACGGGAGCAGGTCCTATGCCCTGTTCCTCTACCAGAGCGGTGGGATGCAGTGGGACGTGGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73800048 402 + 74750902 CTCAGCGATCAGGTTCT-------GGTAGCTTCCTCTTATAAAGACTTATCTAACT---GAATTATAACCCAGAACCCTTTATCTCCCCT-CCTGG------AAGATAGTCAC-AA-AAAGGCAAATACACCGT-------------------------------------G-GTAAGTGC-----TTTCCCA--CCCAGGGTG-ATGCTGCCCTAGCTGACCAGAAACTTGCCCGCCTTTTGGGGCCCATGCCTTT---GCTGTGGGCAGACCTGGAACAG-GTGATGTGC--ACGTCAGAGCAGCGCTGTGGGACGGGTGGGAGGACG-TAAGAGAGGAGA-CCCCGGTCACTCACCGGCATCCCTGTGTTT-GCT----------CCCAGACCAACACCTACCAGGCCATCCTCTCCACGGACGGAAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGGATGCAGTGGGACGCGGCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17251312 410 - 17725628 CTCAGCTCTCAGGTGCT-------GGTACCTTTCCCTTACAAACACTTATCTAACT---GAATTACAACCCAGAACCCTTTATCTCCCCT-CCTGG------AAGACAGTCAC-AA-AAAGGCAAATACACGGT-------------------------------------G-GTAAGTGC-----TTTCATA---CCAGGCGG-AAGCTGCCCGAACTGACCTGAAACTTGCCAGCCTTTTGGGGCCCATGCCTTT---GCTGTGGGCAGACC-AGAACAG-GTGATGTGC--ACGTCAAAGCAGGGCTGTGGGATGGGTGGGAGGACG-GAAGAGAGGAGACCCCCGCTCACTCACGGGCA-CCCTGTGTTT-GCTTCCACCCACCCCCAGACCAACACCTACCAGGCTGTCCTCTCCACGGACGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGGATGCAGTGGGACGCGGCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6339265 410 + 6778120 CTCAGCTCTCGGGTTCT-------GGCAGCTTTCTCTTACAAACACTGATCCAACT---GAATGATAACCCAGAACGCTTTATCTCCCCT--CTGG------AGGATAGTCAC-AA-AAAGGCAAATACACCGT-------------------------------------G-GTAAGTGC-----TTTCACA--CCCAGGGTG-ACGCTGCCCTAACCGACCCAAAACTTGCCAGCCTTTTGGGGCCCATGCCTTT---GCCGTGGGCAGACCAGGAACAG-GTGATGCGC--ACGTCAAAGCAGGGCTGTGGGACGGGTGGGAGGACG-TAAGAGAGGAGACCCCCGCTCACTCACGGGCA--CCTGTGTTT-GCTCCCACCCACCCCCAGACCAACACCTACCAGGCTGTGCTCTCCACGGACGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGTGGTGGGATGCAGTGGGACGCGGCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 14398 403 - 21398 CTCAGCTCTCAGGTTCT--------GTAGCTTTCTCTTACAAACACTTATCTAACT---GAATTATAACCCTAA--CCTTTATCTCCCCT--CCCG------AAGATAGTCAC-AA-AAAGGCAAATACACGGT-------------------------------------G-GTAAGTGC-----TTTCACA--CCCAGGGTG-AAGCTGCCCTAACTGACCCAAAAC-TGCCAGCCTTTTGGGG-CCATGCCTTT---TGCTGGGGCAGGCT-GGGACAGAGTGATGTGC--ACATCAAAGTGGGGCTGCGGGACGGGTGGGAGGACA-TAAGAGAGGAGA-CCCCGGTCACTCATGGACATCCCTGTGTTT-GCTTCCACCCACCCCCAG-CCAACACCTACCAGGCCATCCTCTCCACGGACGGGAGCAGGTCCTATGCCCTGTTT-TCTACC-GAGCGGTGGGATGCAGTGGGACGCGGCC i aotNan1.NW_018492867v1 C 0 I 7 s micMur3.chr1 88359059 414 + 114275543 CTAATCTCTCAGGTTCC-------TGTAGCTTTCTCTAACAAACCCTCTTCTGGTT---GGATTATAACCCAGAGCCCTTTATCTCCCCT-CCTGGG-----AAAAGAGTCACAAA-AAAGGCAAGTCCCCCAT-------------------------------------G-GTAAGTGC-----TTTGCCA---AAGGGAGGAAAGCTGCCCGAACTGATCCCAAACTTGCCAGCATTTTAGGC-CCATGCCTTT---GCTCTGCACAGCCCAGCAACAG-GTGATGTGT--GTGTTGGGGCAGGGGTGTGGGCCAGGTGACGGTACG-TGAGGGAGGAGACCCCAGATCTCTCACAGGCAT-CCTGTGTTTGTCTCCCACCCACCCCCAGACCAACACCTACCAGGCCATCCTCTCCACGGATGGAAGCAGGTCCTACGCCCTGTTCCTCTACCAGAGCGGCGGGATGCGATGGGATGTGACC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14769479 418 - 22200726 CTAATCTCTCAGGTTCC-------TGTAGCTTTCTCTAACAAACCCTCTTCTGATT---GGATTGTAACCTGGAGCCCTTTATCTCCCCT-CCTGGG-----AAAAGAGTCACAAA-AAAGGCAAGTCCCCCAT-------------------------------------A-GTAAGTGC-----TTTGCCA--CCCAGGAGGAAAGCTGCCTGAACCGATCCCAAACTTGCCAGCATTTTAGGC-CCATGCATTTTAGGCTCTGCACAGCCCAGGAATAG-GTGATGTGT--GTGTTGGGACAGGCGTGTGGGACAGGCGGGGGGACG-TGAGGGAGGAGACCCCAGGTCTCTCACAGGCAT-CCTGTGTTCGTCTCCTACCCACCCCCAGACCAGCACCTACCAGGCCATCCTCTCCACGGATGGGAGCAGGTCCTACACCCTGTTCCTCTACCAGAGTGGCAGTATGCAGTGGGACGTGACC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 179194 400 + 608964 CTGATCTCTCAGGCTCC-------T-------------ATAAACCCTCTTCTGATT---GGATTACAACCCAGAACTCTTTATCTCCCCT-CCTGGG----AAAAAGAGTCAC-AA-AAAGGCAAATCCACCAT-------------------------------------GAGTGAGTGC-----TTTGACA--ACCAGGGTGACAGGTGCCCTAACTGACCCCAGACTTGCCAGCATTTTAGGC-ACATGCCTTT---GCTCTGCCCAGCCCAGAAACAG-GTGATGTGT--GTGTTGGGGCAGGGGTGTGGGACAAGTGG-GGGAGA-TGAGAGAGGAGACCCCAGATCTCTCACAAGCAT-CTT-TGTTCATCTCCTCCCCA-CCCCAGACCAACACCTACCAGGCCATCCTCTCCACAGACGGGAGCAGGTCCTACGCCCTGTTCCTCTACCAGAGCGGTGGTATGCAGTGGGACTCAACC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32762124 402 + 98207768 ttga--actcaggacctttggaagagcagtcagtgctcttaaccactcagccatctctccagccccAACCCACAGCCCTTTATTTCCTCT-CCCTGAAAAAAAAAAAAGTTAC-AAGGAAGGAAAATAGGGCAT-------------------------------------G-CTAAGATC-----TTCTGCA--CCCAGGGTAAGTGTTACTCTAATC-ACAGCAAGCACG-CAGCAGGTGCAGC-CCA----------GATG------GACCAGGAATAG-GTGACGTCCCTGTGTCTGCTCAGAGGTGTGGGA----------GACA-CCAGGGAGGAAACCTCAGATCTCTCAATGACATC----TGTTTGTCTCTCCCCAACTTCCAGACCAATACCTACCAAGCCATCCTCTCCACAGATGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAACAGTGGCATGAGGTGGGATGTGACC i mm10.chr16 I 538 C 0 s canFam3.chr33 2295641 393 - 31377067 CTAATCTTTCTGAGTCC-------TGAGGCTTTCTCACACAAACTCTCTTCTGACT---GGATCCTAAACCAGAACGCTTTATCACCCCTTCCTGG------ACAGAAGTCACAAA-AAAGGCAGGTCCACCAC-------------------------------------G-GTAGACGC-----TTTGACAGCCCGGGGGGGAAAGCTGCCCTGCACAATC------------------------CCAAG--TTT---GCTCTGAGTAGGCTAGGGAAAG-AGGATGTGT--GTATCGGGGCAGGGTTGTGGGGAGGGTGATGGGACA-TTGGGGAGGAGACCCCAGATCGCTCACAGGCATCCCTGTGTTTGTCTTCAACAAACCTCCAGACCAGCACCTACCAGGCCATCCTCTCCACAGACGGCAGCAGGTCCTACGCCCTGTTTCTTTATCAGAGCGGCGGCATGCAGTGGGATGTGACC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2671773 396 - 6579706 ttaa--tctctgtttcc-------tTTAACTTCCTCT------------TCTAATT---CCATTGTTA-CCAGGGCCCTTTACCTCTCCTCCCTGG------AAATAAGTCACGAG-GAAGGCAAATCCACCAT-------------------------------------G-TTAGGTGC-----TTTGACA--GCAAGGGTAAAAGCTGCCCTACACAATCCCAAA-TTGCCAGCATTTAAAGC-CC-TGTCTTT---GCTCTGGATAGGTTAGGAACAA-GGGATGTGT--GTGTTGGGGCAGGGGTGTGGGGTAGGTGGTGGGACC-TCAGGGAGGAGACCCCAGATCTCTCACAGGCAACCCTATGCTTGTCTT---CCCATCCCTAGACCAACACCTTCCAGGCCATCCTGTCCACGGACGGGAGCAGGTCCTACGCCCTGTTTCTCTACCAAAGTGGTGGTATGCAGTGGGACGTGACC i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M a score=112233.000000 s hg38.chr3_KI270934v1_alt 25676 9 + 163458 CAGCGCTCA s panTro5.chr3 2487952 9 - 202621043 CAGCGCTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86387 9 - 190779 CAGCGCTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 8341 9 + 55620 CAGCGCTCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2796355 9 - 123690457 CAGCGCTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2307026 9 - 204787373 CAGCGCTCA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19115138 9 - 19675229 CAGCGCTCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16347842 9 - 16847902 CAGCGCTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91314772 9 + 91754291 CAGCGCTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1371526 9 + 1977891 CAGCGCTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7326688 9 - 7796314 CAGCGCTCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73800450 9 + 74750902 CGGCACGCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17251722 9 - 17725628 CGGCAGGCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6339675 9 + 6778120 CGGCACGCA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88359473 9 + 114275543 CAGCGCTTA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14769897 9 - 22200726 CAGCGCCCA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 179594 9 + 608964 CAGCGCCCG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32762526 9 + 98207768 CAGGAACCA i mm10.chr16 C 0 C 0 s canFam3.chr33 2296034 9 - 31377067 CAGCGCCCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2672169 9 - 6579706 AAGCGCCCA i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018492867v1 14801 7 - 21398 I e macFas5.chr2 192362332 14732 - 192460366 M a score=1306532.000000 s hg38.chr3_KI270934v1_alt 25685 110 + 163458 GGCAACCCGGTGCTCAT--GGGCTTCTCTAGGTAGGA---T-GGGAGGGGCT----GTCAGCACTGAGCAGTTGGCAGGGAG-GGGTGTAGAGT-CGGCTTTCGCTGCACACACA----CTCCCAT s panTro5.chr3 2487961 110 - 202621043 GGCAACCCGGTGCTCAT--GGGCTTCTCCAGGTAGGA---T-GGGAGGGGCT----GTCAGCACTGAGCAGTTGGCAGGGAG-GGGTGTAGAGT-CGGCTTTCGCTGCACACACA----CTCCCAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86396 110 - 190779 GGCAACCCGGTGCTCAT--GGGCTTCTCCAGGTAGGA---T-GGGAGGGGCT----GTCAGCACTGAGCAGTTGGCAGGGAG-GGGTGTAGAGT-CGGCTTTCGCTGCACACACA----CTCCCAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 8350 110 + 55620 GGCAACCCGGTGCTCAT--GGGCTTCTCCAGGTAGGA---T-GGGAGGGGCT----GTCAGCACTGAGCAGATGGCAGGGAG-GGGTGTAGAGT-CGGCTTTCGCTGCACACACA----CTCCCAT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2796364 110 - 123690457 GGCAACCTGGTGCTCAT--GGGCTTCTCCAGGTAGGA---T-GGGAGGGGCT----GTCAGCACTGAGTAGATGGCAGGGAG-GGGTGTAGAGT-CAGGTTTCGCTGCACACACA----CTCCCAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2307035 109 - 204787373 GGCAACCTCGTGCTCAT--GGGCTTCTCCAGGTAGGA---T-GGGAGGGGTT----GTCAGCACTGAGCAGATGGCAGGGA--GGGTGCAGAGT-GGGGTTTCACTGCACACACG----CTCCCAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19115147 109 - 19675229 GGCAACCTCGTGCTCAT--GGGCTTCTCCAGGTAGGA---T-GGGAGGGGTT----GTCAGCACTGAGCAGATGGCAGGGA--GGGTGCAGAGT-GGGGTTTCACTGCACACACA----CTCCCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16347851 109 - 16847902 GGCAACCTCGTGCTCAT--GGGCTTCTCCAGGTAGGA---T-GGGAGGGGTT----GTCAGCACTGAGCAGATGGCAGGGA--GGGTGCAGAGT-GGGGTTTCACTGCACACACG----CTCCCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91314781 109 + 91754291 GGCAACCTCGTGCTCAT--GGGCTTCTCCAGGTAGGA---T-GGGAGGGGTT----GTCAGCACTGAGCAGATGGCAGGTA--GGGTGCAGAGT-GGGGTTTCACTGCACACACG----CTCCCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1371535 109 + 1977891 GGCAACCTCGTGCTCAT--GGGCTTCTCCAGGTAGGA---T-GGGAGGGGTT----GTCAGCACTGAGCAGATGGCAGGGA--GGGTGCAGAGT-GGGGTTTCACTGCACACACA----CTCCCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7326697 111 - 7796314 GGCAACCTCGTGCTCAT--GGGCTTCTCCAGGTAGGATGGT-GGGGGGGGTT----GTCAGCACTGAGCAGATGGCCGGGAG-GGGTGCAGAGT-GGGGTTTCACTG--CACACG----CCCCCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73800459 109 + 74750902 GGCAGCCCGGTGCTCAT--GGGCTTCTCCAGGTAGGA---T-GGGAGGGGCT----GTCCGCACTGAGCAGATGGCAAGAG--GGGTGCAGAGC-GGGGTTTCACTGCACACACA----TGCCCAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17251731 101 - 17725628 GGCAGCCCGGTGCTCAC--GGGCTTCTCCAGGTAGGA---T-GGGAGGGGCT----GTCCGCGCTGAGCGGATGTCAGGA---GGGTGCCGA---GGGGTCTCACTGCACACACA----CT----- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6339684 102 + 6778120 GGCAGCCCGGTGCTCAT--GGGCTTCTCCAGGTAGGA---T-GGG-GGGGCT----GTCTGCACTGAGC-GATGGCAGGAG--GGGTGCCGAGC-GCGGTTTCACTGCACACACA----TT----- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 14808 108 - 21398 GGCAGCCCAGTGCTCATCAGGGCTTCTCCAGGTAGGA---T-GGGAGGGGCT----GTCCGCACTAAGCAGATGGCAGGAG--GGGTGCAGAGC-G-GGTTTCACTGCACACACT----CC--CAT i aotNan1.NW_018492867v1 I 7 C 0 s micMur3.chr1 88359482 110 + 114275543 GGCACCTCCGTCCTCAT--GGGCTTCTCCAGGTGAGA---A-GAGAGGGACT----GTCGGTGCCGAGCAGATGGCAGGAAG-AGGGGCAGAGT-GGGCTTTCGCTACACATGCA----CTTCTGT i micMur3.chr1 C 0 I 116 s proCoq1.NW_012133858v1 14769906 110 - 22200726 GGCACCTCCGTCCTCAT--GGGCTTCTCCAGGTGGGA---A-GAGAGGGGCT----GTCAGTGCCAAGCAGATGGCAGGAAG-AGGGGCAGAGT-GGGCTTTCGCTGCACACGCA----CTCCCAT i proCoq1.NW_012133858v1 C 0 I 1 s otoGar3.GL873829 179603 105 + 608964 GGCAACCCAGTCCTCAT--GGGCTTCTCCAGGTAGGA---A-GGGAGGGG-T----GTCCTCACTGAGC---TGGCAGGGAG-AGAGGCGGAGC-AGG-TGTCCTGGCTCACACA----TTCCTGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32762535 98 + 98207768 TACAACCGGGTGCTCAT--GGGCTTCTCCAGGTAAGA---C-GGGATGGGCTTGCCGTCAGCACTGGACTGC-----------GAGAGCTAAGT-GTG----CCCTGCTCACAC------TCCTAT i mm10.chr16 C 0 C 0 s canFam3.chr33 2296043 117 - 31377067 GGCAACCCGGTGCTCAT--GGGCTTCTCCAGGTAGGA---CAGGGATGGACG----GCCAGCGCTGAGCACGTAATGGGAGGTGGTGGCAGGGTCAGGTTTTTGAGGCACACACACCTCCTCCCAT i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 2672178 109 - 6579706 GAAAACTCCGTCCTCAT--GGGCTTCTCCAGGTAGAA---C-GGGAAGGGCT----GTCAATACCGACCAGATAATAAGAC--GTGTGCAGAGCAGGGTTTTCACGGAACCCAC-----CCCACAT i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M a score=75389.000000 s hg38.chr3_KI270934v1_alt 25795 16 + 163458 CCTGGGGCAAGGCGGG s panTro5.chr3 2488071 16 - 202621043 CCTGGGGCAAGGCGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86506 16 - 190779 CCTGGGGCAAGGCGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 8460 16 + 55620 CCTGGGGCAAGGCGGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2796474 16 - 123690457 CCTGGGGCAAGGCGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2307144 15 - 204787373 CCTG-GGCGAGATGTG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19115256 15 - 19675229 CCTG-GGCAAGATGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16347960 16 - 16847902 CCTGAGGCAAGATGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91314890 16 + 91754291 CCTGGGGCAAGATGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1371644 16 + 1977891 CCTGGGGCAAGATGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7326808 16 - 7796314 CCTGGGGCAAGATGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73800568 15 + 74750902 CCTG-GGCCGGGCATA i calJac3.chr17 C 0 C 0 s aotNan1.NW_018492867v1 14916 15 - 21398 CCTG-GGCAGGCGTGA i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 14770017 16 - 22200726 CCTGGGACAAGGCGCC i proCoq1.NW_012133858v1 I 1 I 96 s otoGar3.GL873829 179708 16 + 608964 CTGGAAACAAGGCACC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32762633 4 + 98207768 CCCG------------ i mm10.chr16 C 0 C 0 s canFam3.chr33 2296162 16 - 31377067 CCCGGGACAGGGTATG i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 2672287 16 - 6579706 TCAAGCACAAGGCTTG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88359592 116 + 114275543 I e saiBol1.JH378146 17251832 0 - 17725628 C e cebCap1.NW_016107444v1 6339786 0 + 6778120 C e macFas5.chr2 192362332 14732 - 192460366 M a score=793002.000000 s hg38.chr3_KI270934v1_alt 25811 96 + 163458 AACCCTCCTGGCTGGTGCTTCTGACTCACGCTGACTCCAGCTCCCGCTGGGGCCAGGCATCTGGCTGCTTCCCACGACAAGAT---CACCCATTTGTCC s panTro5.chr3 2488087 96 - 202621043 AACCCTCCTGGCTGGTGCTTCTGACTCACGCTGACTCCAGCTCCCACTGGGGCCAGGCATCTGGCTGCTTCCCATGACAAGAT---CACCCATTTGTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86522 96 - 190779 AACCCTCCTGGCTGGTGCTTCTGACTCACGCTGACTCCAGCTCCCACTGGGGCCAGGCATCTGGCTGCTTCCCATGACAAGAT---CACCCATTTGTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 8476 96 + 55620 AACCCTCCTGGCTGCTGCTTCTGACTCACGCTGACTCCAGCTCCCACTGGGGCCAGGCATCTGGCTGCTTCCCATGACAAGAT---CACCCATTTGTCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2796490 96 - 123690457 AACCCTCCTGGCTGGTGCTTCTGACTCACGCTGACTCCAGCTACCACTGGGGCCAGGCATCTGGCTGCTTCCCATGACAAGAT---CATCCATTTGTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2307159 96 - 204787373 AACCCTCCTGGTTGGTGCTTCTGACTCACGCTGACTCCAGCTCCCCCTGGGGCCGGGCATCTGGCTGCTTCCCACGACAAGAA---CACCCATTTGTCC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19115271 96 - 19675229 AACCCTCCTGGCTGGTGCTTCTGACTCACACTGACTCCAGCTCCCGCTGGGGCCGGGCATCTGGTTGCTTCCCACGACAAGAA---CACCCATTTGTCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16347976 96 - 16847902 AACCCTCCTGGCTGGTGCTTCTGACTCACGCTGACTCCAGCTCCCGCTGGGGCCAGGCATCTGGCTGCTTCCCACGACAAGAA---CACCCATTTGTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91314906 95 + 91754291 AACCCTCCTGGCTGGTGCTTCTGACTCACACTGACTCCAGCTCCCGCT-GGGCCGGGCATCTGGCTGCTTCCCACGACAAGAA---CACCCATTTGTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1371660 96 + 1977891 AACCCTCCTGGCTGGTGCTTCTGACTCACGCTGACTCCAGCTCCCGCTGGGGCCAGGCATCTGGCTGTTTCCCACGACAAGAA---CACCCATTTGTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7326824 96 - 7796314 AACCCTCCTGGCTGGTGCTTCTGACTCACGCTGACTCCAGCTCCCGCTGGGGCCAGGCATCTGGCTGCTTCCCACGACAAGAA---CACCCATCTGTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73800583 69 + 74750902 AACCCACCTGGCTGATGCTTCTGACTCACTCTGGC---------------------------TGCTGCTTCACATGAAAAGAT---CACCCATTTGTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17251832 94 - 17725628 --CCCTCCCGGCTGATGCTTCCGACTCACACGGGCGCCAGCTCCCACTGGGGCCGGGCATCTGGCTGCTTCACATGAAAAGAT---CACCCATTTGTCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6339786 94 + 6778120 --CCCTCCTGGCTGATGCTTCTGACTCACACTGGCTCCAGCTCCCACTGGGGCCAGGCATCTGGCTGCTTCACATGAAAAGAT---CACCCATTTGTCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 14931 78 - 21398 ACCCTCTCTGGCTGATGCTTCTGACTCACACTGG-----------------GCCAGGCATCTGGCTGCTTCACATGAAAAAGT---CA-CCATTTGTCC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 179724 86 + 608964 TATCATCCTTGCTGCTGATTCTGACTCACACCTGCTCAAGTTCCTGCCGGGGCCACATGTCTTGCCATTTCAGATGAAAAG-------CCCCT------ i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32762637 45 + 98207768 -----TCCTTG--------------------------------------------AATATGTAGCTCTTCCTGATG--AAACC---CCCCCACTCATCC i mm10.chr16 C 0 I 1 s canFam3.chr33 2296178 85 - 31377067 AATCCTTCTTATTGACGTTTCTGACCCACGCCTGCTCCAATCCCCCCT-----------TCTTGCTGTTTCAAATGAAAAGATACCCATCCACTGG--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2672303 57 - 6579706 -------------AATGCCAGTGACTCACACTGACTCCTGTTCCCACTGAAACCACATGTCTTGCTCTTT----------------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14770033 96 - 22200726 I e micMur3.chr1 88359592 116 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M a score=4223783.000000 s hg38.chr3_KI270934v1_alt 25907 393 + 163458 GCCATGCCCTTTCCCATCCCAGTCCCCGTGAGTT-------------------------GTAATCATTCCCAGAGCTTTGGCTTCCCTGA----TTTCCACTGACATTAGCTGGCCTCTCTTACCTTCTCAAATA---TCGTGataataacagccaagactgatgacactaa-cacttcgtgtac----atta---------------ctgcatgtca-tgatcacag--ccaccccacgaggcagatactatttatc-----------atccccattctacagatcaggaaactgagatacaaatagactagcaatttgcctaaagtcccagagctgggaagtggcaacatggagatttgaacccagacatctgaggctagaatctgccttcctgacTTC--------CTGAGAATTACCCACTTATCCAGGGGGCACCC-AAAAGCTTATAT------GGAG-CCGGTGGTGA s panTro5.chr3 2488183 391 - 202621043 GCCATGCCCTTTCCCATCCCAGTCCCCGTGTGTT-------------------------GTAATCATTCCCAGAGCTTTGGCTTCCCTGA----TTTCCACTGACATTAGCTGGCCTCTCTTACCTTCTCAAATA---TCATGataataacagccaagactgatggcactaa-cacttcgtgtac----atta---------------ctgcatgtca-tgatcacag--ccaccccacgaggcagatactatttatc-----------atccccattctacagatcaggaaac--agatacaaatagactagcaatttgcctaaagtcccagagctgggaagtggcaacatggagatttgaacccagacatctgaggctagaatctgccttcctgacTTC--------CTGAGAATTACCCACTTATCCAGGGGGCACCC-AAAAGCTTATAT------GGAG-CCGGTGGTGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86618 391 - 190779 GCCATGCCCTTTCCCATCCCAGTCCCCGTGTGTT-------------------------GTAATCATTCCCAGAGCTTTGGCTTCCCTGA----TTTCCACTGACATTAGCTGGCCTCTCTTACCTTCTCAAATA---TCATGataataacagccaagactgatgacactaa-cacttcgtgtac----atta---------------ctgcatgtca-tgatcacag--ccaccccacgacgcagatactattcatc-----------atccccattctacagatcaggaaac--agatacaaatagactagcaatttgcctaaagtcccagagctgggaagtggcaacatggagatttgaacccagacatctgaggctagaatctgccttcctgacTTC--------CTGAGAATTACCCACTTATCCAGGGGGCACCC-AGAAGCTTATAT------GGAG-CCGGTGGTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 8572 393 + 55620 GCCATGCCCTTTCCCATCCCGGTCCCCGTGTGTT-------------------------GTAATCATTCCCAGAGCTTTGGCTTCCCTGA----TTTCCACTGACATTAGCTGGCCTCTCTTACCTTCTCAAATA---TCGTGataataacagccaagactgatgacactaa-cacttcgagtac----atta---------------ctgcatgtca-tgatcacag--ccaccccatgaggcagatactatttatc-----------atccccattctacagatcaggaaactgagatacaaatagactagcaatttgcctaaagtcccagagctgggaagtggcaacgtggagatttgaacccagacatctgaggctagaatctgccttcctgacTTC--------CTGAGAATTACCCACTTATCCAAGGGGCACCC-AAAAGCTTATAT------GGAG-CCGGTGGTGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2796586 393 - 123690457 GCCATGCCCCTTCCCATCCCAGTCCCCGTGTCTT-------------------------GTAATAATGCCCAGAGCTTTGGCTTCCCTGA----TTTCCACTGACATTAGCTGGCCTCTCTTACCTTCTCAAATA---TCGTGATAATAACAGCCAAGACTGATTACActaa-cactttatgtac----ctta---------------ttgcatgtca-tgatcacag--ccactccatgaggcagatactacttacc-----------atccccattctacagatcaggaaactgagatacaaatagactagcaatttgcctaaagtcccagagctgggaagtggcaacatggagatttgaacccagacatctgaggctagaatctgccttcctgacTTC--------CTGCGAATTACCCACTTATCCAGGGGACACCC-AAAAGCTTATAT------GGAG-CCGGTGGTAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2307255 378 - 204787373 ACCACACCCTCTCCCATCCCAGTCCCTGTGCGTT-------------------------GTAATAATTCCCAGAGCTTTGGCTTCCCTGA----TTTCCACT-ACATTAGCTGGCCTCTCTTACCTTCTCAAATA---TCATGataataacagccaagactgatgacactaa-cacttcacgtac----atta---------------ttgcatgtca-tgatcacaa--ccaccccatgaggcggatacgatttatc-----------atccccactctacagatcaggaaactgagatacaaatagactgacaatttgcctaaagtcccagagctgggaagtggcaatgt---gatttgaacccagacatctgaggctagaatctgCCTTCCCGACTTC--------CTGAGAAT----------TCCAGGGGGCAC-C-AAAAGCTTATAA------GGAG-CTGGTGGTGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19115367 378 - 19675229 ACCACGCCCTCTCCCATCCCAGTCCCTGTGCGTT-------------------------GTAATAATTCCCAGAGCTTTGGCTTCCCTGA----TTTCCACT-ACATTAGCTGGCCTCTCTTACCTTCTCAAATA---TCATGataataacagccaagactgatgacactaa-cacttcacgtac----atta---------------ttgcatgtca-tgatcacaa--ccaccccatgaggcggatacgatttatc-----------atccccactctacagatcaggaaactgagatacaaatagactgacaatttgcctaaagtcccagagctgggaagtggcaatgt---gatttgaacccagacatctgaggctagaatctgCCTTCCCGACTTC--------CTGAGAAT----------TCCAGGGGGCAC-C-AAAAGCTTATAA------GGAG-CTGGTGGTGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16348072 374 - 16847902 ACCACATCCTCTCCCATCCCAGTCCCTGTGCGTT-------------------------GTAATAATTCCCAGAGCTTTGGCTTCCCTGA----TTTCCACT-ACATTAGCTGGCCTCTCTTACCTTCTCAAATA---TCATGATAACAACAGCCAAGACTGATGACActaa-cacttcatgtac----atta---------------ttgcatgtca-tgatcacaa--ccaccccatgaggcggatacgatttatc-----------atccccactctacagatcaggaaactgagacacaaata----gacaatttgcctaaagtcccagagctgggaagtggcaatgt---gatttgaacccagacatctgaggctagaatctgCCTTCCCGACTTT--------CTGAGAAT----------TCCAAGGAGCAC-C-AAAAGCTTATAA------GGAG-CTGGTGGTGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91315001 378 + 91754291 ACCACGCCCTCTTCCATCCCAGTCCCCGCGCGTT-------------------------GTAGTAATTCCCAGAGCTTTGGCTTCCCTGA----TTTCCACT-ACACTAGCTGGCCTCTCTTACCTTCTCAAATA---TCATGataataacagccaagactgatgacactaa-cacttcatgtac----atta---------------ttgcatgtca-tgatcacaa--ccaccccatgaggcagatacgatttatc-----------atccccactctacagatcaggaaactgagatacaaatagactgacaatttgcctaaagtcccagagctgggaagtggcaatgt---gatttgaacccagacatctgaggctagaatctgccttcccaacTTC--------CTGAAAAT----------TCCAGGGGGCAC-C-AAAAGCTTATAA------GGAG-CTGGTGGTGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1371756 374 + 1977891 ACCACATCCTCTCCCATCCCAGTCCCCGTGCATT-------------------------GTAATAATTCCCAGAGCTTTGGCTTCCCTGA----TTTCCACT-ACATTAGCTGGCCTCTCTTACCTTCTCAAATA---TCATGATAATAACAGCCAAGACTGATGACActaa-cacttcacgtac----gtta---------------ttgcatgtca-tgatcacaa--ccaccccatgaggcggatactatttatc-----------atccccactctacagatcaggaaactgagacacaaata----gacaatttgcctaaagtcccagagctgggaagtggcaatgt---gatttgaacccagacatctgaggctagaatctgCCTTCCCGACTTT--------CTGAGAAT----------TCCAAGGAGCAC-C-AAAAGCTTATAA------GGAG-CTGGTGGTGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7326920 372 - 7796314 ACC-TGCCCTCTCCCATCCCAGTTCCCGTGCGTT-------------------------GTAATAATTCCCAGAGCTTTGGCTTCCCTGA----TTTCCACTGACATTAGCTGGCCTCTCTTACCTTCTCAAATA---TCATGATAACAACAGCCAAGACTGATGACGctaa-cacttcatgtac----atca---------------ttgcacgtca-tgatcacac--ccaccccatgaggcggatactatttatc-----------atccccactctacagatcagaaaactgagatacaaatagactggcaatttgcctaaagtcccagagctgggaagtggcaatgt---gattt-------gacatctgaggctagaatctgccttcCCGACTTC--------CTGAGAAT----------TCCAGGGGGCACTC-AAAAGCTTATAA------GGAG-CTGGTGGTGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73800652 390 + 74750902 ATCATTCCCTTTCCCATCTGAGTCCCCGT-CATT-------------------------GTAATAATT-CCAGAGCTCTGGCTTCCCTGA----TTTCCGCTGACATCAGCTGGCCTCTCTTAACTTCTCAGATA---TCACGATAGCAacatgcaaggctgattgcactaa-cacttcgtggac----attg---------------ttgcatttgc-ttctcacga--cccccc-atgaggcagacactatttatt-----------atccacattctacggatcgggccactgagctacaaatagactagcaatttgcctcaagtcccagagctgggaagtggcaacatggaggtttgaacccagacgtctgaggctagaatctgccttcctgacTTC--------CTGAGAATTACTCACTCACCCAGGGGGCACCC-GAAAGCTTAAAC------GAAG-CCGGTGGTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17251926 377 - 17725628 A-CACTCCCTTTCCCATCCCAGTCCTCGT-CGTT-------------------------GTAATAATTCCCAGAGCTCTGGCTGCCCTGA----TTTCCACTGACTTCAGCCTGCCTCT-----CTTCTCCACTA---TCACGATCACGGCATCCAAGGCTGactgcactca-cacttcatgcac----attg---------------ttgcgtttga-ttatcatgg--ccaccc-gcgaggcagatcctgtgtatt-----------atccccactctatggatcgggccacggagatacaggtagaccagcaatttgcctcaagtcccagggctgggaaggggcaacgtagaggttcgaacccagacatctgaggctagaatctgc--------cctc--------ctgagaattaCTCACGAACCCAGGGGGCACCC-GAAAGCTTAAGT------GAAG-CCGGAGGTGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6339880 369 + 6778120 ACCATTCCCTTTCCCATCCCAGTCTCCGC-CATT-------------------------GCAATAATTACCAGAGCTCTGGCTTCCCTGA----TTTCCACT---ATCAGCTGGCCGCTCTAAACGTCTCAGATA---TCACGATAATAACATCCAAGGCTGattgcactaa-cacttcatgtgc----attg---------------ttgcatttga-ttgtcacga--ccaccctgtgagacagatactatttatt-----------atccccattct------------actgagatacaagtagactagcaatttgcctcaagtcccagagctgggaagtggcaacgtggaggtttgaacccagacatctgaggctagaatctgc--------cttc--------ctaagaattaCTCACTAACCCATGGGGCACCC-GAAAGCTTAAAT------GAAG-GCGGTGGTGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 15009 381 - 21398 ACCATTCCCTTT-CCATCC-AGTC-CCGT-CATT-------------------------GT--TAATTCCCAGAGCTCTGGCTTCCCTCA----TTTCCACTGACATCAGCTGGCCTCTCTAC-CTTCTCAAATA---TCAGTAACAAAACACCCAaggctgattgcactaa-cgcttcatgcac----attg---------------ttgcatttgatttatcacgaccccaccc-atgag-cagatactatttatt-----------atcc-cattc-acggattggcccactgagatgcaaatagact-gcaattggcctaaagtcccggagctgggaagtggcaacatggaggtttgaa-ccaggcatctgaggctagaatctgC-TTCCTGACTTC--------CTGAGAATTTCTCACT-ACCCCCGGGGCACCC-GAAGGCTTAAAT------GAAG-CCAGTGGTGA i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88359708 387 + 114275543 GCCATTCTCTTTCCCATCGCAATCCCTGTGCATT-------------------------GCAATAATTCCAAGAGCCTGGACTTCCCTGG----TTTCCACTAACACTAGCTGGCCTCTCTTGACTTCTC-AATA---TCG---taataaatgccaagattgattatgctaagtacttcatgtac----atta---------------gttcctttga-ttatcacaa--ccacccaatgaggtagatactgtttatt-----------atccccgttctacagataaggaaactaagaaacaaatagatgcataatt--cctaaagtcacagagctaggaagtggcaaagtggggacttgaacctagacctcagaggctggaacctgtcttcctgaccTC--------CTGAGAATGACCCACTTACCCA-GGGGCACCC-AGCAGCTTATGT------GGAG-CCAGCGGTGA i micMur3.chr1 I 116 I 195 s proCoq1.NW_012133858v1 14770129 394 - 22200726 GCCATTCTCGTTCCCATCCCAATCCCTGTGCATT-------------------------GCAATAATTCCCAGAGCCTGGACTTCCCTGG----TTTCCACTAAGACTAGCTGGCATCTCTTGACTTCTCAAATA---TTG---taatacatgccaagattgattacgctaagtacttcttgtacattaatta---------------gttcctttga-ttatcacaa--ccacccgatgaggtagatactgtctatt-----------atccccattctacagataaagaaacagagaaacaaatagataaacaatttgtctaaagtcacagagctaagaagtggcaaagtggggacttgaatccagacCTCAGAGGCTGGAACCTGCCTTCCTGCCCTC--------CTGAGAATGACCCGCTTACCCA-GGGGCACCT-GGCAGCTTATAT------GGAG-CCAGTGGCGA i proCoq1.NW_012133858v1 I 96 C 0 s otoGar3.GL873829 179810 420 + 608964 GCCACTCTCTTTCCCATCCCAACCTCTGGCTATTGGCGATTTCATATAGCTCAACCTGAGTAATAACTCCCAGAGCCTTGCCTGCCCTGG----TTTCCACCAATGCTAGCTGGCCTCTCTTGACTTCTCAAATA---CCA---TAGTAACTGCCAC-ATTcattacactaggtacttcacatac----atta---------------cttcatttga-ttatcacaa--ccaccctaccaggtagatgctatttatt-----------atccccgttctacaggtaaggaaactgagaaagaaatcggtaagcaacttgcctagagtcacagagctaggaagtggcaaagtggggatttgaacccagataTCAGAGGCTGGACCCTCCCTTCCTGACCTC--------CTGAGAATGAGCCACTTACCCA-GAGGCAACC-AGCAGCTTATATAAACACGGAG-CCAGCAGAGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32762683 346 + 98207768 ---GGCACTGTCCCCATTCCAACACTTGTGTACC-------------------------GGAGTCCTTT---AACCTTTGACCTCCTTGGTTTCTTTCCACTGACATTAGCTGACTTCTC------------------------AGCTAGTAGCCA---CTTATTATACCTATTACGACATATAC----ATTATTTATTTACTGTTTGTTTTCTTTGG-TGATCACAG--CCACCA-ACGA--TAGTTGacaactatcctacagataaaacccttatcctataggtaaggaaacctaggttcaagcagatgagtcatttgcccaaagtcagagagtttcaaagtggcaaagtgggcatcagaacacaggccctccagaGTGGAATTTGT-------------------------------------------GATCCACGC-AGGTTGTTAGAT------GGGA----------- i mm10.chr16 I 1 C 0 s canFam3.chr33 2296263 398 - 31377067 GCCATTCTCTTTCCCACCCCAGTACTCATGCCTT-------------------------ATAATAATTCCCGGAGCGTTGACTTCCCCGA----GTTCTACTGTCCTTAGCTAACCTCTCTCGACCTCTCAAGTACTGTaataataataatagccaccatttattacactaactacttaatatgc----atta---------------tttcatttaa-tcatcacca--ccaccc-atgaaggggctactctttact-----------g--cccattctacagataagaaagcggaggta-aaatggatctggaatt-gccccaagtcccagagct-ggaggtggccaagcaggaactggccccccgccggttgaggccaagctctgccttcgtgacccctGGT-GGGCTGAGCACCAGCCTGTGACCC--GGGGCACCCGGGGGGCTTGGGC------GGGGTCCGGTGGGGG i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 2672360 380 - 6579706 --CATTCTCTGTCTTCTCCCAGTCCCTGTGCATT-------------------------GTAAGAATTGCCAGAGCTTTGACTTCCCTGA----CTTCCACTGACATTAGCTGACTTCTCTTAACATCTCAAATA---CTGTAATGATAGCAGCCAA---------CATTAC-TAGtttatatgc----acta---------------ttccatttga-ttatcataa--tagtcccaggagataaatactatttatt-----------atccctattttacaaataaggacattaagatacatatagataagtaattttcccaaa---------tgaggaaatggccaagcaggcatatgagcccagacatctgaggctagaatctgctcccctgacTTTTAATCAGTCTGAGAATTAACCACTCACCCA-GAGGCACTT-CTCAGTTTATGT------GGAG-TCAGTGATGA i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M a score=519330.000000 s hg38.chr3_KI270934v1_alt 26300 47 + 163458 AGGGAG--AGA--GGAGGCACGGGGCTGTGGGCGGTTGAAATGTGGATTCC s panTro5.chr3 2488574 47 - 202621043 AGGGAG--AGA--GGAGGCACGGGGCTGTGGGCGGTTGAAATGTGGATTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87009 47 - 190779 AGGGAG--AGA--GGAGGCACGGGGCTGTGGGCGGTTGAAATGTGGATTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 8965 47 + 55620 AGGGAG--AGA--GGAGGCACGGGGCTGTGGGCAGTTGAAATGTGGATTCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2796979 47 - 123690457 AGGGAG--AGA--GGAGGCACGGGGCTGTGGGTGGTTGAAATGTGGATTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2307633 47 - 204787373 AGGGAG--AGA--GGAGGCACGGGGCTGTGGGCGGTTGAAATATGGATTTC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19115745 47 - 19675229 AGGGAG--AGA--GGAGGCACGGGGCTGTGGGCGGTTGAAATATGGATTTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16348446 47 - 16847902 AGGGAG--AGA--GGAGGCACGGGGCTGTGGGCGGTTGAAATATGGATTTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91315379 47 + 91754291 AGGGAG--AGA--GGAGGCACGGGGCTGTGGGCGGTTGAAATATGGATTTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1372130 47 + 1977891 AGGGAG--AGA--GGAGGCACGGGGCTGTGGGCGGTTGAAATATGGATTTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7327292 47 - 7796314 AGGGAG--AGA--GGAGGCACAGGGCTGTGGGTGGTTGAAATATGGATCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801042 47 + 74750902 GGGGAG--AGA--AGAAGCAGGGGGCCGTGGGTGGTTGGAATGTGGATTCC i calJac3.chr17 C 0 I 5 s saiBol1.JH378146 17252303 46 - 17725628 AGGGAG--AGA--AGAGGCA-GGGGCTGTGGGTGGTTGAAATGAGGATTCC i saiBol1.JH378146 C 0 I 5 s cebCap1.NW_016107444v1 6340249 46 + 6778120 AGGGAG--AGA--AGAGGCG-GGGGCTGCGGGCGGTTGAAATGCGGATTCC i cebCap1.NW_016107444v1 C 0 I 5 s aotNan1.NW_018492867v1 15390 45 - 21398 AGGGAG--AGA--AGGGGC--GGGGCTGTGGCTGGTTGAAATGTGGATTCC i aotNan1.NW_018492867v1 C 0 I 5 s proCoq1.NW_012133858v1 14770523 47 - 22200726 AGAGGG--AGG--GCAGGGTGGGGGCTGTGGGCAGTTGAAGTGTGGGTTCC i proCoq1.NW_012133858v1 C 0 I 144 s otoGar3.GL873829 180230 46 + 608964 GGAGGG--AGA--GGAGGGTCGGGGC-ATGGGCAGTGGAAATGTGAGTTCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32763029 41 + 98207768 AGGAGG--TGA--GGAGA---AGGGCCGTGGCTGGCTGTGGCATGATC--- i mm10.chr16 C 0 C 0 s canFam3.chr33 2296664 45 - 31377067 AGGCAGACAGA--GCAGGCAAGGGGCTGCGGG----GGCGCCGCAGACTCC i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 2672740 49 - 6579706 AGGGAG--AGAGTGGAGGGATGAGTTTGTAGATGAGTGAAATGTGGAGGTC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88360095 195 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M a score=987570.000000 s hg38.chr3_KI270934v1_alt 26347 157 + 163458 CGTGTGTGGGAGG------CTGTCTCCGATGTAGCAGTG------------CGCCATC-----------------TCTGTTCCCA--TATGCTGGGGTG-TGGCAATCAGT-------ACGAAGGCCACATGTC----------------------------------------------TTTTGTT-CTTGATAATTGCTGCAAAT-GTCTTCTCTTAC----ATT-GAGTGTGTTCA-GG-TTACCCCTTTGATT s panTro5.chr3 2488621 157 - 202621043 CGTGTGTGGGAGG------CTGTCTCCGATGTAGCAGTG------------AGCCATC-----------------TCTGTTCCCA--TATGCTGGGGTG-TGGCAATCAGT-------ACGAAGGCCACATGTC----------------------------------------------TTTTGTT-CTTGATAATTGCTGCAAAT-GTCTTCTCTTAC----ATT-GAGTGTGTTCA-GG-TTACCCCTTTGATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87056 157 - 190779 CGTGTGTGGGAGG------CTGTCTCCGATGTAGCAGTG------------AGCCATC-----------------TCTGTTCCCA--TATGCTGGGGTG-TGGCAATCAGT-------ACGAAGGCCACATGTC----------------------------------------------TTTTGTT-CTTGATAATTGCTGCAAAT-GTCTTCTCTTAC----ATT-GAGTGTGTTCA-GG-TTACCCCTTTGATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 9012 157 + 55620 CGTGTGTGGGAGG------CTGTCTCCGATGTAGCAGTG------------CGCCATC-----------------TCTGTTACCA--TATGCTGGGGTG-TGGCAATCAGT-------ACGAAGGCCACATGTC----------------------------------------------TTTTGTT-CTTGATAATTGCTGCAAAT-GTCTTCTCTTAC----ATT-GAGCGTGTTCA-GG-TTACCCCTTTGATT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797026 158 - 123690457 TGTGTGTGGGAGG------CTGTCTCCGACGCAGCAGTG------------CGCCATC-----------------TCTGTTCCCA--TATGCTGGGGTG-TGGCAATCAAT-------ACGAAGGCCACATGTC----------------------------------------------TTTTGTT-CTTGATAATTGCTGCAAATGGTCTTCTCTTAC----ATT-GAGTGTGTTCA-GG-TTACCCCTTTGATT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2307680 201 - 204787373 CGTGTGTGGGAGG------CCGTCTCCGATGCAACAGTG------------CACCGTC-----------------TCTG-TCCCA--TATGCTGGTGTG-TGGCAATCAGT-------GCAAAGGCCACATGTC--TTGTTcttcacttgatcttagccaaaaggccgagaagcgatGTCTTTTGTC-CTTGATAATTGCTGCAAATGGTCTTCTCCTAC----ACT-GAATGTGCTCA-GG-TTACCCCTTTGATT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19115792 201 - 19675229 CGTGTGTGGGAGG------CCGTCTCCGATGCAACAGTG------------CACCGTC-----------------TCTG-TCCCA--TATGCTGGTGTG-TGGCAATCAGT-------GCAAAGGCCACATGTC--TTGTTcttcacttgatcttagccaaaaggccgagaagcgatGTCTTTTGTC-CTTGATAATTGCTGCAAATGGTCTTCTCCTAC----ACT-GAGTGTGCTCA-GG-TTACCCCTTTGATT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16348493 201 - 16847902 CGTGTGTGGGAGG------CCGTCTCCGATGCAACAGTG------------CACCGTC-----------------TCTG-TCCCA--TATGCTGGTGTG-TGGCAATCAGT-------GCAAAGGCCACAGGTC--TTGTTcttcacttgatcttagccaaaaggccgagaagcgatGTCTTTTGTC-CTTGATAATTGCTGCAAATGGTCTTCTCCTAC----ACT-GAGTGTGCTCA-GG-TTACCCCTTTGATT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91315426 201 + 91754291 CGTGTGTGGGAGG------CCGTCTCCAACGCAACAGTG------------CACCGTT-----------------TCTG-TCTCA--TATGCTGGTGTG-TAGCAATCAGT-------GCAAAGGCCACGTCTT--TTGTTcttcacttgatcttagccaaaaggccgagaagcgatGTCTTTCGTT-CTTGATAATTACTGCAAATGGTCTTCTCCTAC----ACT-GAGTGTGCTCa-gg-ttacccctttgatt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1372177 201 + 1977891 CGTGTGTGGGAGG------CTGTCTCCGACGCAACAGTG------------CACCGTC-----------------TCTG-TCCCA--TATGCTGGTGTG-TGGCAATCAGT-------GCAAAGGCCACATGTC--TTGTTcttcacttgatcttagccaaaaggccgagaagcgatGTCTTTTGTC-CTTGATAATTGCTGCAAATGGTCTTCTCCTAC----ACT-GAGTGTGCTCA-GG-TTACCCCTTTGATT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7327339 204 - 7796314 CGTGTGTGGGAGG------CTGTCTCCGATGCAACAGTG------------CACCATC-----------------TCTGTTCCCA--TATGCTGGTGTG-TGGCAATCAGT-------GCAAAGGCCACATGTCTTTTGTTcttcacttgatcttagccaaaaggccgagaagcaatGCCTTTCGTT-CTTGATAATTGCTGCAAATGGTCTTCTCCTAC----ATT-GAGTGTGTTCA-GG-TTACCCCTTTTATT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801094 170 + 74750902 CTCGTGGAGGAGG------CTCTCTCCGACGTGACGGTGCCCACTTCTGCTCCCTGCT-----------------TCTGTTCCCA--CAGGCTGGTGTG-TGGCAGTCGGT-------GTGAAGGTCACATGTC----------------------------------------------TCTTGTT-CTTGATCATTGCAGCGCATGTTCTTCCCTTAC----AAC-AAGTGTGTTCA-GG-TCACCCCTTTAGTC i calJac3.chr17 I 5 C 0 s saiBol1.JH378146 17252354 155 - 17725628 CGCGTGGAGGAGG------CTCTTTCCGCCGTGACAGCG------------CCCCGCT-----------------TCTGTTCCCA--GAAGCTGGTGTG-TGGCAATCAGT-------GCGAGGGTCACATGTC----------------------------------------------TCTTGTT-CTTGATAATTGCA---CACGGTCTTCCCTTAC----GTC-AGGTGTGTTCA-GG-TTACCCCTTTAATC i saiBol1.JH378146 I 5 C 0 s cebCap1.NW_016107444v1 6340300 156 + 6778120 CGCGTGGAAGA-G------CTGTCTCCGACATGACAGCG------------CCCCGCG-----------------TCTGTT-CCA--TAAGCTGGTGTG-TGGCAATCAGT-------GTGAAGGTCACATGTC----------------------------------------------TCCTGTT-CTTGATAATTGCCCCCCTTGGTCTCCCCTTAC----CTC-AGGTGTGTTCA-GG-TTGCCCCTTTAATC i cebCap1.NW_016107444v1 I 5 C 0 s aotNan1.NW_018492867v1 15440 155 - 21398 CGTGTGGAGGAGG------CTCTCTCCGACGTGACGGTG------------CCCCGGC-----------------TC-GTTCCCA--TAAGCTGGTGTG-TGGCAATCAGT-------GCGAAGGTCACATGTC----------------------------------------------TCTTGTT-CTGGATAATCGCTGCGCGTGGTCTTCCCTTAC----ATC-AA--GTGTTCA-GC-TTACCCCTTTGATC i aotNan1.NW_018492867v1 I 5 C 0 s otoGar3.GL873829 180276 157 + 608964 --TGAGTGGGAAGGCGGCTCGGGCTCTGACTCAACAGTT------------CTTAGTCATAACAGTCCTCAGTCATATATTCACG--TATGCTGACGTG-TGGCAGTCAGT---------------CTCACTTC----------------------------------------------GTTTGTT-CCTGGTAATTCCCAGAAGTGGTTTTC-------------------TGTTCa-gg-ttgcccctgtaatt i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32763070 61 + 98207768 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTACTGGGTGGTTGTCACAGATGGGTTTCTTTTAC----ATTAGGGTGTGTTCG-GC-CTGCCTA------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2296709 117 - 31377067 --TGTGTGTGGGG------GTGACT---------CAGTC------------TCTGACC-----------------GCGGGTCTCAACACCGCTCGGGTG-AGCCACCGGTT-------GTGAAGGGCAC--GTC----------------------------------------------CCGTACC-CCCG------------------------------------GCTTGTGACCAGGG-CTGACCCCGTCATT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2672789 178 - 6579706 ----------------TTTCAGTCTCTGAC---ACAGTG------------C----------------------------TTCCA--TACCTTGGTGTATTAGCGATGAATTGTGAAGGTGAAGGAGACTCGAT---------------GAATTGTGAAGGAGACTCGGAGACTCGTGTAATTTGGT-ACTGGTAATTGCtgcaaatggttttcctctatgcaaatg-gagtatgttca-ggatcattcctataatt i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14770570 144 - 22200726 I e micMur3.chr1 88360095 195 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M a score=46527.000000 s hg38.chr3_KI270934v1_alt 26504 4 + 163458 ACAC s panTro5.chr3 2488778 4 - 202621043 ACAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87213 4 - 190779 ACAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 9169 4 + 55620 ACAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797184 4 - 123690457 TCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2307881 4 - 204787373 ACAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19115993 4 - 19675229 ACAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16348694 4 - 16847902 ACAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91315627 4 + 91754291 acac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1372378 4 + 1977891 ACAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7327543 4 - 7796314 ACAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801264 4 + 74750902 ACAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17252509 4 - 17725628 ACAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6340456 4 + 6778120 ACAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 15595 4 - 21398 ATGC i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 14770714 4 - 22200726 ACAT i proCoq1.NW_012133858v1 I 144 C 0 s otoGar3.GL873829 180433 4 + 608964 ccat i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32763131 4 + 98207768 GCAT i mm10.chr16 C 0 C 0 s canFam3.chr33 2296826 4 - 31377067 CCAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2672967 4 - 6579706 acat i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88360095 195 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M a score=894002.000000 s hg38.chr3_KI270934v1_alt 26508 72 + 163458 TGCTTTCACTAGTTTCTTGGTGTGCTATGAAGGAGAAAGGAGGGGAATTACCCAACT--CT--------AGGAATTTCACAC s panTro5.chr3 2488782 72 - 202621043 TGCTTTCACTAGTTTCTTGGTGTGCTATGAAGGAGAAAGGAGGGGAATTACCCAACT--CT--------AGGAATTTCACAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87217 72 - 190779 TACTTTCACTAGTTTCTTGGTGTGCTATGAAGGAGAAAGGAGGGGAATTACCCAACT--CT--------AGGAATTTCACAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 9173 72 + 55620 TGCTTTCACTAGTTTCTTGGTGTGCTATGAAGGAGAAAGGAGGGGAATTACCCAACT--CT--------AGGAATTTCACAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797188 71 - 123690457 TGCTTTCACTAGTTTCTTGGTGTGCTATGAAGGAGAA---AGGGGAGTTCCCCAACTGCCT--------AGGAATTTCACAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2307885 74 - 204787373 TGCTTTCACTGGTTACTTGGTGTGCTgtgaaggtgaaaggaggggaattacccaactgcct--------aggaatttcacat i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19115997 74 - 19675229 TGCTTTCACTGGTTACTTGGTGTGCTgtgaaggtgaaaggaggggaattacccaactgcct--------aggaatttcacat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16348698 74 - 16847902 TGCTTTCACTGGTTACTTGGTGTGCTATGAAGGTGAAAGGAGGGGAATTGCCCAACTGCCT--------AGGAATTTCACAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91315631 74 + 91754291 tgctttcactagttacttggtgtgctatgaaggtgaaaggaggggaattacccaactgcct--------aggaatttcacat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1372382 74 + 1977891 TGCTTTCACTGGTTACTTGGTGTGCTATGAAGGTGAAAGGAGGGGAATTACCCAACTGCCT--------AGGAATTTCACAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7327547 74 - 7796314 TGCTTTCACTGGTTACTTGGTGTGCTATGAAGGTGAAAGGAGGGGAATTACCCAGCTGCCT--------AAGAATTTCACAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801268 72 + 74750902 TGCTGTCGCTAG-TTTTTGGTGTGCTATGAAGGAGTAAGGAGTGGAAGTGCCCAACTACCT--------GG-GATGTCACAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17252513 74 - 17725628 TGCTTTCGCTAGTTTTTTGGTGTGCTATGAAGGAGTAAGGACTGGAAGTACCCAACTACCT--------AGCAATGTCACAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6340460 72 + 6778120 TGCTTTCGCTAG-TGTTTTGTGTGCTACGAAGGAGTAAGGAGTGGAATTACCCAACTACTA--------GG-AATGTCACAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 15599 74 - 21398 TGCTTTCGCAAGTTTTTTGGTGTGCTGCGAAGGAGTAAGGAGTAGAAGTACCCAACTACCT--------AGGAATGTCACAC i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88360290 74 + 114275543 TGCTTTCATTAGTTTTTTGACGTGCTATGAAGGAGAAAGGAGTAGAATGACCCAACTAGCT--------AGGACTTTCACAC i micMur3.chr1 I 195 I 195 s proCoq1.NW_012133858v1 14770718 74 - 22200726 TGCTTTCATTAGCTTTTTGCCATGCTATGACGGAGAAAGGAGTGGAATGACCCAACTAGCG--------AGGAATTTCACAC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 180437 74 + 608964 tgttttcactagttttttgatatgctgtgaaggagaaaggagaggaatgacccaaccagct--------aggaatttcacac i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32763135 73 + 98207768 GGCTTTGACTGA-CTTTTGATGTGCAATGAAGGAAGAAAGCATGTAATTACTCAGGCAGCT--------AGCAATTCCACAC i mm10.chr16 C 0 I 1 s canFam3.chr33 2296830 82 - 31377067 CGCCTTCGCTCTCTTTCTGATGCGCTTAGAGGGGCAAAGGGCTGGAATCGGCCGGCTCGCTGGGGCGCGAGGGCTGTCGCAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2672971 74 - 6579706 tgcctttacttgctttatgatatgctgtgaaggagaaaggagtagaattatccaacgagcg--------aggaatttcacac i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M a score=335816.000000 s hg38.chr3_KI270934v1_alt 26580 30 + 163458 -GGTCCAGGTACACCCAAGGAAGGTGTCACG s panTro5.chr3 2488854 30 - 202621043 -GGTCCAGGTACACCCAAGGAAGGTGTCACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87289 30 - 190779 -GGTCCAGGTACACCCAAGGAAGGTGTCACG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 9245 30 + 55620 -GGTCCAGGTACACCCAAGGAAGGTGTCATG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797259 30 - 123690457 -GGTCCAAGTACACCCGAGGAAGGTGTCACG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2307959 30 - 204787373 -ggtccaagtacacccaaggaaggtgtcaca i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19116071 30 - 19675229 -ggtccaagtacacccaaggaaggtgtcaca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16348772 30 - 16847902 -GGTCCAAGTACACCCGAGGAAGGTGTCACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91315705 30 + 91754291 -ggtccaagtacatccgaggaaggtgtcaca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1372456 30 + 1977891 -GGTCCAAGTACACCCGAGGAAGGTGTCACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7327621 30 - 7796314 -GGTCCAAGTACACCTGAGGAAGGTGTCACG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801340 30 + 74750902 -GGTCCACGTACGCCCGAGGAAGGTGCCACG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17252587 30 - 17725628 -GGTCCAAGTGCGCCCGAGGGAGGTGCCACG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6340532 30 + 6778120 -GGCCCAAGTACGCCTGAGGAAGGTGCCATG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 15673 30 - 21398 -GGTCCAAGCATGCCCGAGGAAGGTGCCACG i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 14770792 30 - 22200726 -CATCCAAGTACACCCAAGGGAGGTGTCACG i proCoq1.NW_012133858v1 C 0 I 140 s otoGar3.GL873829 180511 30 + 608964 -catccaagtacacccaaaggaggggtcaag i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32763209 29 + 98207768 -GTCCTCAGTAAACCCAACTG-GACATCATG i mm10.chr16 I 1 C 0 s canFam3.chr33 2296912 29 - 31377067 -GTCCCGAGTACGCCTTGGGCGGGTGTCCG- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2673045 31 - 6579706 catcttgagtgtgccccatggaggtgtcaag i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88360364 195 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M a score=654388.000000 s hg38.chr3_KI270934v1_alt 26610 89 + 163458 CAGGGGTGCATCATCCTGCTTGTGTCAGGGA-GGAGGAAAAGCCCAAGAGTCCCCACTCTGCAGCAGGCACCCAGGGTGGGGCTGCAGGC s panTro5.chr3 2488884 89 - 202621043 CAGGGGTGCATCATCCTGCTTGTGTCAGGGA-GGAGGAAAAGCCCAAGAGTCCCCACTCTGCAGCAGGCACCCAGGGTGGGGCTGCAGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87319 89 - 190779 CAGGGGTGCATCATCCTGCTTGTGTCAGGGA-GGAGGAAAAGCCCAAGAGTCCCCACTCTGCAGCAGGCACCCAGGGTGGGGTTGCAGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 9275 89 + 55620 CAGGGGTGCATCATCCTGCTTGTGTCAGGGA-GGAGGAAAAGCCCAAGAGTCCCCACTCTGCAGCAGGCACCCGGGGTGGGGCTGCAGGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797289 89 - 123690457 CAGGGGTGCATCATCCTGCTTGTGTCAGGGA-GGAGGAAAAGCCCAAGAGTTCCCACTCTGCAGCAGGCATCCAGGGTGGGGCTGCAGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2307989 89 - 204787373 caggggtgcgtcatcctgcttgtgtcaggga-ggaggaaaagCCCAAGAGTCCCCACTCTGCAGCAGGCACCCAGGATGGGGCTACAGGC i rheMac8.chr2 C 0 I 3920 s macNem1.NW_012014355v1 19116101 89 - 19675229 caggggtgcgtcatcctgcttgtgtcaggga-ggaggaaaagCCCAAGAGTCCCCACTCTGCAGCAGGCACCCAGGATGGGGCTACAGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16348802 89 - 16847902 CAGGGGTGCGTCATCCTGCTTGTGTCAGGGA-GGAGGAAAAGCCCAAGAGTCCCCACTCTGCAGCAGGCACCCAGGATGGGTCTACAGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91315735 89 + 91754291 caggggtgcgtcatcctgcttgtgtcaggga-ggaggaaaagCCCAAGAGTCCCCACTCTGCAGCAGGCACCCGGGATGGGGCTACAGGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1372486 89 + 1977891 CAGGGGTGCATCATCCTGCTTGTGTCAGAGA-GGAGGAAAAGCCCAAGAGTCCCCACTCTGCAGCAGGCACCCAGGATGGGGCTACAGGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7327651 89 - 7796314 CAGGGGTGCGTCATCCTGCTTGTGTTAGGGA-GGAGGAAAAGCCCAAGAGTCCCCACTCTgcagcaggcacccaggatggggctacaggc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801370 70 + 74750902 CAGGGGTGCACCATCCCACTTGTGTCAGGGAGGGAGGAAAAGCC--------------------CAGGCACCCAGGGTGGGGCTGCAAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17252617 68 - 17725628 CAGGGGGGCATCATCCCGC-TGCGTCAGGGA-GGAGGAAAAGCC--------------------CAGGCACCTGGAGTGCAGCTGCAGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6340562 66 + 6778120 CAGGGGGGCACCATCCCGC-TGTGTCAGGGA-GGAGG-AAAGCC--------------------CAGGCACCC-GGGTGGGGCTGCAGGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 15703 69 - 21398 CAGGGGCGCATCATCCCGCTTGTGTCAGGGA-GGAGGAAAAGCC--------------------CAGGCACCTGGGGTGGGGCTGCAGGC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 180541 76 + 608964 caagtgtgtgccatccAGCTGGTTTTA--GA-GGGGGAGAAAGTCAGGAGTCACGGCCCC-CAGCATGCACCTGGGGTGA---------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32763238 87 + 98207768 CATGTATTTGTCCTCTAGCCTGCGTGACTAT-AGAGCAAAGACC-AGGAGTCGCTTTCTGTGGGCATGCTCCTGTAGTAGCAGTG-AGGC i mm10.chr16 C 0 C 0 s canFam3.chr33 2296941 86 - 31377067 -CCGTGTGGCCCGCCTGGCCCGTGTCACACA-GGGGGTGGGGGGCTGCAGGCTCCCCTCCCAGAGAAGCGCC--GGGGGGTGCTCCTCGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2673076 37 - 6579706 -----------catgtgaCCTGCCT----AA-G-------------------------------------CCCAGAGCAAGCCTGGAGGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e micMur3.chr1 88360364 195 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M a score=26046.000000 s hg38.chr3_KI270934v1_alt 26699 3 + 163458 GGC s panTro5.chr3 2488973 3 - 202621043 GGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87408 3 - 190779 GGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 9364 3 + 55620 GGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797378 3 - 123690457 GGC i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19116190 3 - 19675229 CGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16348891 3 - 16847902 CGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91315824 3 + 91754291 CGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1372575 3 + 1977891 CGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7327740 3 - 7796314 tgc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801440 3 + 74750902 AGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17252685 3 - 17725628 GGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6340628 3 + 6778120 GGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 15772 3 - 21398 GGC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 180617 3 + 608964 GGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32763325 3 + 98207768 TGC i mm10.chr16 C 0 C 0 s canFam3.chr33 2297027 3 - 31377067 GGC i canFam3.chr33 C 0 I 66 s dasNov3.JH569502 2673113 3 - 6579706 TGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e micMur3.chr1 88360364 195 + 114275543 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2308078 3920 - 204787373 I a score=223297.000000 s hg38.chr3_KI270934v1_alt 26702 24 + 163458 TG-CTCCAGGCTTTCCTCCTTCCCG s panTro5.chr3 2488976 24 - 202621043 TG-CTCCAGGCTTTCCTCCTTCCCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87411 24 - 190779 TG-CTCCAGGCTTTCCTCCTTCCCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 9367 24 + 55620 CG-CTCCAGGCTTTCCTCCTTCCCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797381 24 - 123690457 CG-CTCCAGGCTTTCCTCCTTCCCG i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19116193 24 - 19675229 CG-CTCCAGGCTTCTCTCCTTCCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16348894 24 - 16847902 CG-CTCCAGGCTTCTCTCCTTCCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91315827 24 + 91754291 CG-CTCCAGGCTTCTCTCCTTCCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1372578 24 + 1977891 CG-CTCCAGGCTTCTCTCCTTCCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7327743 24 - 7796314 cg-ctgcaggctTCTCTCCTTCCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801443 25 + 74750902 CGTTTCTAGGCTTTCCTCTTCCCCG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17252688 24 - 17725628 CG-CTCCAGGCTTTCCTCCTTCCCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6340631 24 + 6778120 CG-TTCCAGGCTTTCCTGCTTCCCG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 15775 23 - 21398 CG-CTCCAGGC-TTCCTCCTTCCCG i aotNan1.NW_018492867v1 C 0 I 65 s otoGar3.GL873829 180620 24 + 608964 TG-CCCCAGGCCTTCCTCTGTCCTA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32763328 24 + 98207768 TG-CTGCAGACTTCCTTCCGTCCTG i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2673116 24 - 6579706 TG-CTCCAGACTTTCCTCCTTCCTA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e micMur3.chr1 88360364 195 + 114275543 I e canFam3.chr33 2297030 66 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2308078 3920 - 204787373 I a score=-2288.000000 s hg38.chr3_KI270934v1_alt 26726 2 + 163458 -GG s panTro5.chr3 2489000 2 - 202621043 -GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87435 2 - 190779 -GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 9391 2 + 55620 -GG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797405 2 - 123690457 -AG i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19116217 2 - 19675229 -AG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16348918 2 - 16847902 -AG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91315851 2 + 91754291 -AG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1372602 2 + 1977891 -TG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7327767 2 - 7796314 -AG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801468 2 + 74750902 -AA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17252712 2 - 17725628 -AG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6340655 2 + 6778120 -AG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 180644 1 + 608964 --G i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32763352 1 + 98207768 --G i mm10.chr16 C 0 I 1 s dasNov3.JH569502 2673140 3 - 6579706 ATG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e canFam3.chr33 2297030 66 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2308078 3920 - 204787373 I a score=106400.000000 s hg38.chr3_KI270934v1_alt 26728 20 + 163458 CCATGCTCGG-ACCCCACACC s panTro5.chr3 2489002 20 - 202621043 CCATGCTCGG-ACCCCACACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87437 20 - 190779 CCATGCTCGG-ACCCCACACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 9393 20 + 55620 CCATGCTCGG-ACCCCACACC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797407 20 - 123690457 CTCTGCTCGG-ACCCCATACC i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19116219 19 - 19675229 C-ATGCTCGG-ACCCCACACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16348920 19 - 16847902 C-ATGCTCGG-ACCCCACACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91315853 19 + 91754291 C-GTGCTTGG-ACCCCACACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1372604 19 + 1977891 C-ATGCTCGG-ACCCCGCACC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7327769 19 - 7796314 C-GTGCTCGG-ACCCCACACC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801470 19 + 74750902 CCGCGCTCAA-ACCCCACA-C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17252714 20 - 17725628 CCGTGCTCAG-ACCCCACACC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6340657 20 + 6778120 CCGTGCTCGG-ACCCCACACC i cebCap1.NW_016107444v1 C 0 C 0 s mm10.chr16 32763354 8 + 98207768 -------------CCCACACT i mm10.chr16 I 1 C 0 s dasNov3.JH569502 2673143 21 - 6579706 CAGTACTGGGAACCCCATGCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2308078 3920 - 204787373 I a score=15678.000000 s hg38.chr3_KI270934v1_alt 26748 2 + 163458 TG s panTro5.chr3 2489022 2 - 202621043 TG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87457 2 - 190779 TG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 9413 2 + 55620 TG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797427 2 - 123690457 TG i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19116238 2 - 19675229 TG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16348939 2 - 16847902 TG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91315872 2 + 91754291 TG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1372623 2 + 1977891 TG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7327788 2 - 7796314 TG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801489 2 + 74750902 TG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17252734 2 - 17725628 TG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6340677 2 + 6778120 TG i cebCap1.NW_016107444v1 C 0 I 53 s dasNov3.JH569502 2673164 2 - 6579706 TA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2308078 3920 - 204787373 I a score=72016.000000 s hg38.chr3_KI270934v1_alt 26750 14 + 163458 GGGACggtgatggc s panTro5.chr3 2489024 14 - 202621043 GGGACggtgatggt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87459 14 - 190779 GGGACggtgatggt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 9415 14 + 55620 GGGACggtgatggc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797429 14 - 123690457 CGGACGGTGATGGC i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19116240 14 - 19675229 CAGAtggtgatggc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16348941 14 - 16847902 CAGATGGTGATGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91315874 14 + 91754291 CAGAtggtgatggc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1372625 14 + 1977891 CAGATGGTGATGGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7327790 14 - 7796314 CAGATGGTGACGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801491 14 + 74750902 CAGACGGTGATGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17252736 14 - 17725628 CAGACGGTGATGGA i saiBol1.JH378146 C 0 C 0 s dasNov3.JH569502 2673166 14 - 6579706 AGGATGGTGCTGTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2308078 3920 - 204787373 I a score=23826.000000 s hg38.chr3_KI270934v1_alt 26764 13 + 163458 gatagtggtggtg s panTro5.chr3 2489038 4 - 202621043 gata--------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87473 4 - 190779 gata--------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 9429 13 + 55620 gatagtggtggtg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797443 13 - 123690457 GATAgtggtggtg i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19116254 13 - 19675229 catagtggtggtc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16348955 13 - 16847902 CATAgtggtggtc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91315888 13 + 91754291 catagtggtggtc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1372639 13 + 1977891 CATAGTGGTGGTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7327804 13 - 7796314 CATAgtggtggtc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801505 9 + 74750902 AA----GGTGCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17252750 13 - 17725628 GATGGTGGTGGTG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e dasNov3.JH569502 2673180 0 - 6579706 C e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2308078 3920 - 204787373 I a score=21743.000000 s hg38.chr3_KI270934v1_alt 26777 10 + 163458 -gtggtggtgg s panTro5.chr3 2489042 10 - 202621043 -gtggtggtgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87477 10 - 190779 -gtggtggtgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 9442 10 + 55620 -gtgatggtgg i gorGor5.CYUI01001831v1 C 0 I 231 s nomLeu3.chr11 2797456 10 - 123690457 -gtgatggtgg i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19116267 7 - 19675229 -gtggtgg--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16348968 7 - 16847902 -gtggtgg--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91315901 7 + 91754291 -gtggtgg--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1372652 7 + 1977891 -GTGGTGG--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7327817 7 - 7796314 -atggtgg--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801514 8 + 74750902 GGTGGTGG--- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e dasNov3.JH569502 2673180 0 - 6579706 C e saiBol1.JH378146 17252763 0 - 17725628 C e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2308078 3920 - 204787373 I a score=8415.000000 s hg38.chr3_KI270934v1_alt 26787 3 + 163458 tgg s panTro5.chr3 2489052 3 - 202621043 tgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87487 3 - 190779 tgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 9683 3 + 55620 tgg i gorGor5.CYUI01001831v1 I 231 C 0 s nomLeu3.chr11 2797466 3 - 123690457 tgg i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19116274 3 - 19675229 cga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16348975 3 - 16847902 cga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91315908 3 + 91754291 cga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1372659 3 + 1977891 CGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7327824 3 - 7796314 cga i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801522 3 + 74750902 TGG i calJac3.chr17 C 0 I 300 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e dasNov3.JH569502 2673180 0 - 6579706 C e saiBol1.JH378146 17252763 0 - 17725628 C e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2308078 3920 - 204787373 I a score=301179.000000 s hg38.chr3_KI270934v1_alt 26790 113 + 163458 tggtggtagtggcggtggaggtggcag------------tggcgatggtgatggtggtgatggtggtggtgatggtggt---gatggtg---gtggtgttgggggtgatggtggcgatggtggtggtggt-g s panTro5.chr3 2489055 117 - 202621043 tggtggtagtggcggtggaggtggcag------------tggtggtggtgatggtggtgatggtggtggtggtggtggtggcgatggtg---gtggtgatggtggtgatggtggtgttgggggtgatggtgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87490 113 - 190779 tggtggtagtggcggtggaggtggcag------------tggtggtggtgatggtggtgatggtggtggtggtggtggt---ggtgatg---gtgatggtggtggtagtgttggtggtggtggtgatggt-g i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 9686 113 + 55620 tggtggtggtggtagtgttggtggtga------------tggtggtggtgacgatgatggtggtggtggtggtggtggt---gatggtg---gtggtggtgatgatggtggtggtggtggtggtggtggt-g i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797469 113 - 123690457 tggtgatgttggtggcggtgatggcgg------------cagtggcggtggcgatggtggtggtggaggtggcaatggt---gatggcg---gtggtggtggcagcaatggtagtgttggcggtggcgat-g i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19116277 116 - 19675229 tggtggtagtgttggtggtggtggcgg------------tgatgatagggttggtgttgatggtggtgctgatagtggt---gggggtggaagtggtgatggtggtagtggtggtgatggtggtgatttt-g i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16348978 116 - 16847902 tggtggtagtgttggtggtgatggcgg------------tgatgatagtgttggtgttgatggtggtgctgatagtggt---ggtggtggaagtggtgatggtggtagtggtggtgatggtggtgatttt-g i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91315911 112 + 91754291 tggtggtagtgttggtggtggtggcgg------------tgatgatagtgttggtgttgatggtggtgctgat----gt---ggtggtgaaagtggtgatggtggtggtggtggcgatggtggtagtgtt-g i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1372662 116 + 1977891 TGGTGGTAGTGTTGGTGGTGGTGGCGG------------TGATGATAGTGTTGGTGTTGATGGTGGTGCTGATAGTGGT---GGTTGTGGAAgtggtgatggtggtagtggtggtgatggtggtgatttt-g i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7327827 113 - 7796314 tggtggtagtgttggtggtggtggcggtggtagtggtgatggtggtagtgttggtgttggtggtggtgctgatggtggt---agtg------gtggtgatggtggtagtggtggtgatggtg---------- i colAng1.NW_012118932v1 C 0 M 734 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e dasNov3.JH569502 2673180 0 - 6579706 C e saiBol1.JH378146 17252763 0 - 17725628 C e calJac3.chr17 73801525 300 + 74750902 I e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2308078 3920 - 204787373 I a score=22610.000000 s hg38.chr3_KI270934v1_alt 26903 9 + 163458 atggtggtg s panTro5.chr3 2489172 9 - 202621043 gcgatggtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87603 9 - 190779 atggtggtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 9799 9 + 55620 atggtggtg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797582 9 - 123690457 gtggtggca i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19116393 9 - 19675229 gtggtagtg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16349094 9 - 16847902 gtggtagtg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91316023 9 + 91754291 gtggtggtg i chlSab2.chr15 C 0 I 6988 s manLeu1.NW_012102020v1 1372778 9 + 1977891 gtggtagtg i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e dasNov3.JH569502 2673180 0 - 6579706 C e saiBol1.JH378146 17252763 0 - 17725628 C e calJac3.chr17 73801525 300 + 74750902 I e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I e colAng1.NW_012118932v1 7327940 734 - 7796314 M e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2308078 3920 - 204787373 I a score=13052.000000 s hg38.chr3_KI270934v1_alt 26912 21 + 163458 ---gtggtgg--tgatggtggt---------------------ga-tg s panTro5.chr3 2489181 24 - 202621043 ---gtggtcgattggtggtggt---------------------gattg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87612 21 - 190779 ---gtagtgt--tggtggtgac---------------------ga-tg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 9808 21 + 55620 ---gtggtgg--tggtggtgat---------------------ga-tg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797591 21 - 123690457 ---atggtgg--tgatggtggc---------------------ga-tg i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19116402 21 - 19675229 ttggcagtgg--tggtggtggc---------------------a---- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16349103 42 - 16847902 ttggcagtgg--tggtggtggcgatggtggtagtgttggtgttg---- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1372787 21 + 1977891 ttggcagtgg--tggtggtggc---------------------g---- i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e dasNov3.JH569502 2673180 0 - 6579706 C e saiBol1.JH378146 17252763 0 - 17725628 C e calJac3.chr17 73801525 300 + 74750902 I e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I e colAng1.NW_012118932v1 7327940 734 - 7796314 M e chlSab2.chr15 91316032 6988 + 91754291 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2308078 3920 - 204787373 I a score=98812.000000 s hg38.chr3_KI270934v1_alt 26933 93 + 163458 atggtggtggcaatg-------------atggtggtgatggtg-gtggtgg-------------------tgg-tgatggtggt-ggtggcgatggtgatggt--------ggtgg------------------tgatggtggtggtggccgat s panTro5.chr3 2489205 117 - 202621043 gtggtggtggcaatgtggtatgttgggtatggcggtgatggtgtgtggtag-------------------tggttggtggtggtagatggtgatggtgatggtgcgtgatggatga------------------tggtggtggtggtggccgat i panTro5.chr3 C 0 I 44 s gorGor5.CYUI01001831v1 9829 92 + 55620 gtggtggtggtagtg-------------ttggtggtgatggtg-gtggtga-------------------cga-tgatggtggt-ggtggtggtagtggtgtt--------ggtgg------------------tgatggtggtggtggtggt- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797612 92 - 123690457 gtggtggtggtggtg-------------atggtggtgatggtg-gtggtgg-------------------tgg-tggtgatggt-ggcgatggtggtggtggt--------ggtgg------------------tggtggtgatggtggcgat- i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19116423 92 - 19675229 gtggtggtggcgatg-------------gtggtagtgttggtg-ttggtgg-------------------tag-tgctgatggt-ggtagtgttggtggtggt--------ggtgg------------------aagtggtgatggtggtaat- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16349145 129 - 16847902 gtggtggtgctgatg-------------gtggtagtgttggtg-gtggtggtggaagtgtttggtggtaatgg-tggtgatggt-ggtagtgttgttgttggt--------ggtggtcgcaatggtggtagtgttggtggtggtggcggtggt- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1372808 92 + 1977891 gtggtggtggcgatg-------------gtggtagtgttggtg-ttcgtgg-------------------tgg-tgctgatggt-ggtagtgttggtggtggt--------ggtgg------------------aagtggtgatggtggtaat- i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e dasNov3.JH569502 2673180 0 - 6579706 C e saiBol1.JH378146 17252763 0 - 17725628 C e calJac3.chr17 73801525 300 + 74750902 I e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I e colAng1.NW_012118932v1 7327940 734 - 7796314 M e chlSab2.chr15 91316032 6988 + 91754291 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2308078 3920 - 204787373 I e panPan2.chrUn_NW_014024201v1 87633 0 - 190779 C a score=22398.000000 s hg38.chr3_KI270934v1_alt 27026 40 + 163458 ggtggtattttttggggggtggccagtgatggtggtgatg s gorGor5.CYUI01001831v1 9921 34 + 55620 ggtggtagtgttggtggtgt------tggtggtgacgatg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797704 31 - 123690457 ggtggtgatgttggcaatgg------tggtggtggcg--- i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19116515 34 - 19675229 ggtggtgatggtggcgatgg------tggtagtgttggtg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16349274 34 - 16847902 ggtggtggtggtggtgatgg------tggtggtggtggaa i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1372900 34 + 1977891 ggtggtgatggtggcgatgg------tggtagtgttggtg i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e dasNov3.JH569502 2673180 0 - 6579706 C e saiBol1.JH378146 17252763 0 - 17725628 C e calJac3.chr17 73801525 300 + 74750902 I e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I e colAng1.NW_012118932v1 7327940 734 - 7796314 M e chlSab2.chr15 91316032 6988 + 91754291 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2308078 3920 - 204787373 I e panPan2.chrUn_NW_014024201v1 87633 0 - 190779 C e panTro5.chr3 2489322 44 - 202621043 I a score=215944.000000 s hg38.chr3_KI270934v1_alt 27066 202 + 163458 gtgatggtggtggtgg-----tggtggtggcgatggtggtggtgatggtggt-gatggtggtggcaatggtgatga---tggtggtggtggtgatggtggtggtgatggtggtggcaatggtaatggtgatggtgatgatg----gtggtggcgatggtggtggtgatggtg------atggtggtggtgatggtgat---------------ggtggtggtgatggtgatggtgg s panTro5.chr3 2489366 198 - 202621043 gtgatgtcggtggtggtttattggtggtgatgatggtggtggcgatggtggt-gatggtggtgg---tggtggtga---tggtggtggtggcaatggtggtagtgttgggtgtggca---gtgatggtggtggtggtagtg----ttggtgg---tggtgatggtgatggtg------gtgatggtgatgatgatggt---------------ggtggtggtgatggtgatggtgg i panTro5.chr3 I 44 C 0 s gorGor5.CYUI01001831v1 9955 193 + 55620 atggtggtggtggtgg-----tagtgttggtggcggtggcggtgatggtggcgggtggcggtggcggtggcggcga---tggtggcgg-ggcggcggcggcggcggtggtggtggtg---gtggtggtggtggtggtagtg----ctgg------cgatggtagtgatggtg------atggtggtgacgatggtgat---------------ggtggtggtgatggtgatggtgg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797735 202 - 123690457 atggtggtgatggtgg-----tggtggtggtgatggtggtggtgatggtggt-ggtggtggtagtggtggtggtga---tgttggcgatggtgatgttggcaatggtgatggtggtgatggtggtggcgatggtggtggta----gtggtggtggtgatggtggcgatggtg------gtggtagtgttagcggtgat---------------ggtggtggcgatggtggtgatgt i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19116549 207 - 19675229 gtggtggtggtggcgg-----tggtggtggtggtattggtgttggtggtggt-gctgatggtggtagtgctggtgg---tggtggcggtggtggtggtggcaatggtggtagtggtg---gtggtggcgatggtggtagtgtggtgtgggaggcggggtggtggtgagggtg----tggtggtggtgg-aatggtgat----------gtgggtatggtggt--tggtgatggtgg i macNem1.NW_012014355v1 C 0 I 3 s cerAty1.NW_012004056v1 16349308 220 - 16847902 gtggtgatggtggtag-----tggtggtagtggtgatggtggtggtggaggt-ggtgatggtggcagtgttggtagtgttggtggtggtggtgatggtggcagtgttggtagtggtg---gtggtggtggtggtgatggtg----gcggtggaggtggtgatggtggtagtg---ttggtggtggtggcaatggtggcagtgttggtggtggtggcggtggtggtagcgatggtgg i cerAty1.NW_012004056v1 C 0 I 3 s manLeu1.NW_012102020v1 1372934 196 + 1977891 gtggtggtggcggcag-----tggtggtggtgatggtggcggtattggtgtt-ggtggtggtgg------tggctg---tggtggtggtggcaatggtggtagtgttggtggtggtg---gcgatggtggtagtgttggtg----gtggtggaggcggtggtggtggtggtggaactggtggtggtggtagtggtgat---------------ggtggtggaggtggtgatgg--- i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e dasNov3.JH569502 2673180 0 - 6579706 C e saiBol1.JH378146 17252763 0 - 17725628 C e calJac3.chr17 73801525 300 + 74750902 I e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I e colAng1.NW_012118932v1 7327940 734 - 7796314 M e chlSab2.chr15 91316032 6988 + 91754291 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2308078 3920 - 204787373 I e panPan2.chrUn_NW_014024201v1 87633 0 - 190779 C a score=-4607.000000 s hg38.chr3_KI270934v1_alt 27268 13 + 163458 -------tggtagtgttggt s panTro5.chr3 2489564 9 - 202621043 -------tggtagtgt---- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 10148 9 + 55620 -------tggtagtgt---- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797937 9 - 123690457 -------tggcaatgg---- i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19116759 14 - 19675229 agtagggtgatggt------ i macNem1.NW_012014355v1 I 3 C 0 s cerAty1.NW_012004056v1 16349531 13 - 16847902 tgt-tggtggtggt------ i cerAty1.NW_012004056v1 I 3 C 0 s chlSab2.chr15 91323020 13 + 91754291 tgg-tggtggtggt------ i chlSab2.chr15 I 6988 C 0 s manLeu1.NW_012102020v1 1373130 13 + 1977891 tgg-CAGTGTTGGT------ i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e dasNov3.JH569502 2673180 0 - 6579706 C e saiBol1.JH378146 17252763 0 - 17725628 C e calJac3.chr17 73801525 300 + 74750902 I e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I e colAng1.NW_012118932v1 7327940 734 - 7796314 M e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2308078 3920 - 204787373 I e panPan2.chrUn_NW_014024201v1 87633 0 - 190779 C a score=2345.000000 s hg38.chr3_KI270934v1_alt 27281 2 + 163458 gg s macNem1.NW_012014355v1 19116773 2 - 19675229 gg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16349544 2 - 16847902 ga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323033 2 + 91754291 gg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1373143 2 + 1977891 GG i manLeu1.NW_012102020v1 C 0 I 429 s colAng1.NW_012118932v1 7328689 2 - 7796314 gg i colAng1.NW_012118932v1 M 734 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e dasNov3.JH569502 2673180 0 - 6579706 C e saiBol1.JH378146 17252763 0 - 17725628 C e calJac3.chr17 73801525 300 + 74750902 I e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2308078 3920 - 204787373 I e nomLeu3.chr11 2797946 0 - 123690457 C e gorGor5.CYUI01001831v1 10157 0 + 55620 C e panPan2.chrUn_NW_014024201v1 87633 0 - 190779 C e panTro5.chr3 2489573 0 - 202621043 C a score=62631.000000 s hg38.chr3_KI270934v1_alt 27283 30 + 163458 tggtgg-tggtgatggt--gatggtgatggtag s panTro5.chr3 2489573 30 - 202621043 tggtgg-tggtgatggt--gatggtggtggtag i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 10157 30 + 55620 tggtgg-tgacgatgat--ggtggtggtggtag i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797946 30 - 123690457 tggtga-tggtgatggt--ggtggcgatggtgg i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19116775 31 - 19675229 cagtggttggtggtggt--ggtggtgatggtag i macNem1.NW_012014355v1 C 0 I 3 s cerAty1.NW_012004056v1 16349546 32 - 16847902 tggtgg-tagtggtggtgaggtggtgatggtag i cerAty1.NW_012004056v1 C 0 I 3 s chlSab2.chr15 91323035 30 + 91754291 tggaag-tggtgatggt--ggcagtgttggtag i chlSab2.chr15 C 0 I 3 s manLeu1.NW_012102020v1 1373574 27 + 1977891 ---tgg-tggtagtgtt--ggtggtggtggaga i manLeu1.NW_012102020v1 I 429 I 3 s colAng1.NW_012118932v1 7328691 30 - 7796314 tggagg-tggtgatggt--ggcagtgttggtag i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e dasNov3.JH569502 2673180 0 - 6579706 C e saiBol1.JH378146 17252763 0 - 17725628 C e calJac3.chr17 73801525 300 + 74750902 I e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac8.chr2 2308078 3920 - 204787373 I e panPan2.chrUn_NW_014024201v1 87633 0 - 190779 C a score=24626.000000 s hg38.chr3_KI270934v1_alt 27313 20 + 163458 tgttggtggtgacgatgatg--- s panTro5.chr3 2489603 17 - 202621043 tgttggtggt---gatgatg--- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 10187 11 + 55620 tgctggcgat---g--------- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797976 17 - 123690457 tgatgttggc---aatggtg--- i nomLeu3.chr11 C 0 I 3 s macFas5.chr2 192377282 20 - 192460366 tgttggtggt---ggtggtggcg i macFas5.chr2 M 14732 C 0 s macNem1.NW_012014355v1 19116809 19 - 19675229 tg-tggtggt---ggtggtggtg i macNem1.NW_012014355v1 I 3 I 1 s cerAty1.NW_012004056v1 16349581 20 - 16847902 tgttggtagt---gttggtggtg i cerAty1.NW_012004056v1 I 3 C 0 s chlSab2.chr15 91323068 20 + 91754291 tggtggtggt---ggtggtggcg i chlSab2.chr15 I 3 C 0 s manLeu1.NW_012102020v1 1373604 20 + 1977891 tggtggtggt---ggtgatggtg i manLeu1.NW_012102020v1 I 3 C 0 s colAng1.NW_012118932v1 7328721 20 - 7796314 tgttggtggt---ggttgccatg i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e dasNov3.JH569502 2673180 0 - 6579706 C e saiBol1.JH378146 17252763 0 - 17725628 C e calJac3.chr17 73801525 300 + 74750902 I e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I e rheMac8.chr2 2308078 3920 - 204787373 I e panPan2.chrUn_NW_014024201v1 87633 0 - 190779 C a score=40992.000000 s hg38.chr3_KI270934v1_alt 27333 16 + 163458 gtggtggtggtggtag s panTro5.chr3 2489620 16 - 202621043 gtggtggtggtggtag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87633 16 - 190779 gtggtggtggtggtag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 10198 16 + 55620 gtggcgatggtggtag i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2797996 16 - 123690457 atggtgatggtggtgg i nomLeu3.chr11 I 3 C 0 s macFas5.chr2 192377302 16 - 192460366 gtggaggtggtgatgg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19116829 16 - 19675229 gcgggtgagtggatgg i macNem1.NW_012014355v1 I 1 C 0 s cerAty1.NW_012004056v1 16349601 10 - 16847902 ------gttgtgatgg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323088 16 + 91754291 atggaggtggtgatgg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1373624 16 + 1977891 gtagtgttggtggtgg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7328741 16 - 7796314 gtggtagtgttggtgc i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e dasNov3.JH569502 2673180 0 - 6579706 C e saiBol1.JH378146 17252763 0 - 17725628 C e calJac3.chr17 73801525 300 + 74750902 I e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I e rheMac8.chr2 2308078 3920 - 204787373 I a score=20932.000000 s hg38.chr3_KI270934v1_alt 27349 9 + 163458 tgctggcga s panTro5.chr3 2489636 9 - 202621043 tgctggcga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87649 9 - 190779 tgctggcga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 10214 9 + 55620 tgctggcga i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2798012 9 - 123690457 tgatggtgg i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192377318 9 - 192460366 tggtagcgt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19116845 9 - 19675229 tggtagcgt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16349611 9 - 16847902 tggtagtgt i cerAty1.NW_012004056v1 C 0 I 18 s chlSab2.chr15 91323104 9 + 91754291 tggtagtgt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1373640 9 + 1977891 tggtagtgt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7328757 6 - 7796314 tggtgg--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801825 9 + 74750902 TGCAGACGG i calJac3.chr17 I 300 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e dasNov3.JH569502 2673180 0 - 6579706 C e saiBol1.JH378146 17252763 0 - 17725628 C e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I e rheMac8.chr2 2308078 3920 - 204787373 I a score=44936.000000 s hg38.chr3_KI270934v1_alt 27358 8 + 163458 tggtggtg s panTro5.chr3 2489645 8 - 202621043 tggtggtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87658 8 - 190779 tggtggtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 10223 8 + 55620 tggtggtg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2798021 8 - 123690457 tggtggtg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2311998 8 - 204787373 TGGTGTTG i rheMac8.chr2 I 3920 C 0 s macFas5.chr2 192377327 8 - 192460366 tggtgttg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19116854 8 - 19675229 tggtgttg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16349638 8 - 16847902 TTGTGTTG i cerAty1.NW_012004056v1 I 18 C 0 s chlSab2.chr15 91323113 8 + 91754291 tggtggtg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1373649 8 + 1977891 tggtgttg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7328763 8 - 7796314 tggtggtg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801834 8 + 74750902 TGATGGAG i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14770822 140 - 22200726 I e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e dasNov3.JH569502 2673180 0 - 6579706 C e saiBol1.JH378146 17252763 0 - 17725628 C e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I a score=33878.000000 s hg38.chr3_KI270934v1_alt 27366 4 + 163458 gtgg s panTro5.chr3 2489653 4 - 202621043 gtgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87666 4 - 190779 gtgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 10231 4 + 55620 gtgg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2798029 4 - 123690457 gtgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2312006 4 - 204787373 GTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192377335 4 - 192460366 gtgg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19116862 4 - 19675229 gtgg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16349646 4 - 16847902 GTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323121 4 + 91754291 gtgg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1373657 4 + 1977891 gtgg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7328771 4 - 7796314 gtgg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801842 4 + 74750902 ATGG i calJac3.chr17 C 0 C 0 s proCoq1.NW_012133858v1 14770962 4 - 22200726 gtgg i proCoq1.NW_012133858v1 I 140 C 0 e mm10.chr16 32763362 0 + 98207768 C e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e dasNov3.JH569502 2673180 0 - 6579706 C e saiBol1.JH378146 17252763 0 - 17725628 C e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I a score=74643.000000 s hg38.chr3_KI270934v1_alt 27370 11 + 163458 tggtAGCAGCA s panTro5.chr3 2489657 11 - 202621043 tggtggCAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87670 11 - 190779 tggtggCAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 10235 11 + 55620 tggtggCAGCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2798033 11 - 123690457 tggtggCAGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2312010 11 - 204787373 TGGTGACAGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192377339 11 - 192460366 tggtgACAGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19116866 11 - 19675229 tgttgACAGCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16349650 11 - 16847902 TGGTGGCAGCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323125 11 + 91754291 tggtgACAGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1373661 11 + 1977891 tggtCACAGCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7328775 11 - 7796314 tggcggtggca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801846 11 + 74750902 TGCTGGTGGTG i calJac3.chr17 C 0 C 0 s proCoq1.NW_012133858v1 14770966 11 - 22200726 tggtggtggcg i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 32763362 9 + 98207768 --GTGACAGTG i mm10.chr16 C 0 I 3 s dasNov3.JH569502 2673180 11 - 6579706 TGGCAGGGGTG i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e saiBol1.JH378146 17252763 0 - 17725628 C e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I a score=34022.000000 s hg38.chr3_KI270934v1_alt 27381 3 + 163458 GTG s panTro5.chr3 2489668 3 - 202621043 GTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87681 3 - 190779 GTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 10246 3 + 55620 GTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2798044 3 - 123690457 GTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2312021 3 - 204787373 GTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192377350 3 - 192460366 GTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19116877 3 - 19675229 GTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16349661 3 - 16847902 GTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323136 3 + 91754291 GTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1373672 3 + 1977891 GTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7328786 3 - 7796314 gtg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801857 3 + 74750902 GTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17252763 3 - 17725628 CTG i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 14770977 3 - 22200726 gtg i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 32763374 3 + 98207768 GTG i mm10.chr16 I 3 C 0 s dasNov3.JH569502 2673191 3 - 6579706 ATG i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I e otoGar3.GL873829 180645 1 + 608964 I a score=74431.000000 s hg38.chr3_KI270934v1_alt 27384 7 + 163458 GCagcat s panTro5.chr3 2489671 7 - 202621043 GCagcat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87684 7 - 190779 GCagcat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 10249 7 + 55620 GCagcat i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2798047 7 - 123690457 GCagcat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2312024 7 - 204787373 GCagcac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192377353 7 - 192460366 GCagcac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19116880 7 - 19675229 GCagcac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16349664 7 - 16847902 GCagcac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323139 7 + 91754291 GCagcac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1373675 7 + 1977891 GCagcac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7328789 7 - 7796314 gCagcac i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801860 7 + 74750902 GCAGCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17252766 7 - 17725628 GCagcac i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 14770980 7 - 22200726 gCagcgc i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 180646 7 + 608964 GCAGCAC i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32763377 7 + 98207768 GTAGGCC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2673194 7 - 6579706 GCCGCTC i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018492867v1 15798 65 - 21398 I e micMur3.chr1 88360364 195 + 114275543 I e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I a score=113516.000000 s hg38.chr3_KI270934v1_alt 27391 11 + 163458 ctgttgtatca s panTro5.chr3 2489678 11 - 202621043 ctgttgtatca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87691 11 - 190779 ctgttgtatca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 10256 11 + 55620 ctgttgtatca i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2798054 11 - 123690457 ctgttgtatca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2312031 11 - 204787373 ctgttgtatcg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192377360 11 - 192460366 ctgttgtatcg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19116887 11 - 19675229 ctgttgtatcg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16349671 11 - 16847902 ctgttgtatcg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323146 11 + 91754291 ctgttgtatcg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1373682 11 + 1977891 ctgttgtatcg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7328796 11 - 7796314 ctgttgtatca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801867 11 + 74750902 CTGTTGTATTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17252773 11 - 17725628 ctgttgtattg i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 88360559 11 + 114275543 ctgttataaca i micMur3.chr1 I 195 C 0 s proCoq1.NW_012133858v1 14770987 11 - 22200726 ctgttgtaaca i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 180653 11 + 608964 CCATTGTATCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32763384 9 + 98207768 CTTCAATGT-- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2673201 11 - 6579706 CCATTGTACTG i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018492867v1 15798 65 - 21398 I e cebCap1.NW_016107444v1 6340679 53 + 6778120 I e canFam3.chr33 2297030 66 - 31377067 I a score=12907.000000 s hg38.chr3_KI270934v1_alt 27402 1 + 163458 a s panTro5.chr3 2489689 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87702 1 - 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 10267 1 + 55620 a i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2798065 1 - 123690457 a i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2312042 1 - 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192377371 1 - 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19116898 1 - 19675229 a i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16349682 1 - 16847902 a i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323157 1 + 91754291 a i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1373693 1 + 1977891 a i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7328807 1 - 7796314 a i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801878 1 + 74750902 A i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17252784 1 - 17725628 a i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6340732 1 + 6778120 a i cebCap1.NW_016107444v1 I 53 C 0 s micMur3.chr1 88360570 1 + 114275543 a i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14770998 1 - 22200726 a i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 180664 1 + 608964 A i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32763393 1 + 98207768 G i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2673212 1 - 6579706 G i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018492867v1 15798 65 - 21398 I e canFam3.chr33 2297030 66 - 31377067 I a score=2807019.000000 s hg38.chr3_KI270934v1_alt 27403 229 + 163458 ggcctcactcagtt-----ctgagggatttgcagatgttactgcatttaatcctcacaatacagtgaggtagatgccact---gtaatcccttttatacagatgtgaaaac-taagaatcagagagggtcagtaa-cttgtctgtggtcaccaagctagta----agtggggggatcagcagttgaatccatcactgcctaactccagaaactgggtcttaaccat-cacaatacactgtccct s panTro5.chr3 2489690 229 - 202621043 ggcctcactcagtt-----ctgagggatttgcagatgttactgcatttaatcctcacaatacagtgaggtaggtgccact---gtaatcctttttatacagatgtgaaaag-taagaatcagagagggtcagtaa-cttgtctgtggtcaccaagctagta----agtggggggatcagcagttgaatccatcactgcctaactccagaaactggctcttaaccat-cacaatacactgtccct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87703 229 - 190779 ggcctcactcagtt-----ctgagggatttgcagatgttactgcatttaatcctcacaatacagtgaggtaggtgccact---gtaatcctttttatacagatgtgaaaac-taagaatcagagagggtcagtaa-cttgtctgtggtcaccaagctagta----agtggggggatcagcagttgaatccatcactgcctaactccagaaactggctcttaaccat-cacaatacactgtccct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 10268 229 + 55620 ggcctcactcagtt-----ctgagggatttgcagatgttactgcatttaatcctcacaatacagtgaggtaggtgctact---gtaatcccttttatacagatgtgaaaac-taagaatcagagagggtcagtaa-cctgtctgtggtcaccaagctagta----agtggggggatcagcagttgaatccatcactgcctaactccagaaactggctcttaaccgt-cacaatacactgtccct i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2798066 229 - 123690457 ggcctcactgagtt-----ctgagggatttgcagatggtactgcatttaatcctcacaatacagcgaggtaggtgctact---gtaatcccttttatacagatgtgaaaac-taagaatcagagagggtcagtaa-cttgtccatggtcaccaagctagaa----agtgtggggatcagcagttgaatccatcactgcctaactccagaaactggctcttaaccat-cataatacactgtccct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2312043 228 - 204787373 ggcctcactcagtt-----ctgagggattcgcagatgttactgcattgaatcctcaccgtacagctaggtc-gtgctact---ttaatcccttttacacagatgtgaaaac-taagaaccagagagggtcagtaa-gttgtccgtggtcaccaagctagta----agtgtggggatcagcagttgaatccgtcactgcctaactccagaaactggctcttaaccat-cacaatacactgtCCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192377372 228 - 192460366 ggcctcactcagtt-----ctgagggattcgcagatgttactgcattgaatcctcaccgtacagctaggtc-gtgctact---ttaatcccttttacacagatgtgaaaac-taagaaccagagagggtcagtaa-gttgtccgtggtcaccaagctagta----agtgtggggatcagcagttgaatccgtcactgcctaactccagaaactggctcttaaccat-cacaatacactgtCCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19116899 228 - 19675229 ggcctcactcagtt-----ctgagggattcgcagatgttactgcattgaatcctcaccgtacagctaggtc-gtgctact---ttaatcccttttacacagatgtgaaaac-taagaaccagagagggtcagtaa-gttgtccgtggtcaccaagctagta----agtgtggggatcagcagttgaatccgtcactgcctaactccagaaactggctcttaaccat-cacaatacactgtCCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16349683 228 - 16847902 ggcctcacttagtt-----ctgagggattcgcagatgttactgcattgaatcctcactgtacagctaggta-gtgctact---gtaatcccttttacacagatgtgaaaac-taagaatcagagagggtcagtaa-gttgtccatggtcaccaagctagta----agtgtggggatcagcagttgaatccgtcactgcctaactccagaaactggctcttaaccat-cacaatacactgtccct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323158 229 + 91754291 ggcctcactcagtt-----ctgagggattcgcagatgttactgcattgaatcctcactgtacagctaggta-gtgctact---ttaatcccttttacacagatgtgaaaacttaagaatcagagagggtcagtaa-gttgtccgtgatcaccaagctagta----agtgtggggatcagcagttgaatccgtcactgcctaactccagaaactggctcttaaccat-cacaatacactgtCCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1373694 228 + 1977891 ggcctcacttagtt-----ctgagggattcgcagatgttactgcattgaatcctcactgtacagctaggta-gtgctact---gtaatcccttttacacagatgtgaaaac-taagaatcagagagggtcagtaa-gttgtccgtggtcaccaagctagta----agtgtggggatcagcagttgaatccgtcactgcctaactccagaaactggctcttaaccat-cacaatacactgtCCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7328808 229 - 7796314 ggcctcactcagtt-----ctgagggatttgcagatgttactgcattgaatcctcactgtccagctaggtaggtgctact---gtaatcctttttacacagatgtgaaaac-taagaatcagagagggtcagtaa-cttgtccatggtcaccaagctagta----agtgtggggatcagcagttgaatccgtcactgtctaactccagaaactgactcttaaccat-cacaatacactgtCCCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73801879 196 + 74750902 GGCCCcactcagtt-----ctgagcgattcgcaggtgttactgcatttaatccccacaatactgcaaggtaggtgctact---gtaatccc-tctacac-gacgtgaaaac-taagactcagagacggtcagt----------GTGGGGATCAG-------------------------CAGTTGAATCCATCCCTGTCTAACTCCAGAGACTGGCTCTTAG-CAT-CACAATACACTGTCCCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17252785 208 - 17725628 ggccccactcagtt-----ctgagcaactcgcaggtgttactgcatttaatcctcacaatactgcaaggtaggtgctact---gtaatccc-tttacacagatgtgaaaac-taagactcagagagggtcagtaa-cttgcccgtggtcaccaggc-----------------------tagctgaatccgtcactgtctaactccagagactggctcttag-cat-cacaatacactatccct i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6340733 225 + 6778120 ggccccactcagtt-----ctgagcgattcgcaggtgttactgcatttaatcctcataatactgcaaggtgcgtgctact---gtcatccc-tttatacagatgtgaaaac-taagactcagagagggtcagtga-cttgcccgtggccaccaggctagta----agtgtggggatcagcagttgaatccatcactgtctaactccagagat--gctcttag-cat-cccagcacactgtccct i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 15863 224 - 21398 ggccccactcggtt-----ctgagcggttcgcaggtgttactgcatttaatcctcacaatactgcaaggtaggtgctact---gtaatccc-tttacacagatgtgaaaac-taa-actcagagagggtcagtaattttgcacgtggtcacagg--tagta----agtgtgggatcgg-cagttgaatccgtcactgtctaactccagagaccggctcttag-cctccacgatacactgtCCT- i aotNan1.NW_018492867v1 I 65 C 0 s micMur3.chr1 88360571 227 + 114275543 ggcttcactcaatt-----ctgagggatttgcaaatatcactgcatttaatcctcacggtgttgtgaggtagatgctgct------gtcccttttacgtagatgtgaaaacttaagaatcagagaggttacgtaa-ctttcccatgggcaccaagctagta----agtgctggcatcagcagctgaacacgtgactgcctaactccagagaccagctcttaaccat-cacaatatactgtCCCC i micMur3.chr1 C 0 I 1 s proCoq1.NW_012133858v1 14770999 218 - 22200726 ggcttcactcaatt-----ctgagggatttacaaatatcactgcatttaatcctcacaatgttgtgaggtagatgctgct---gtagtcccttttacgtagatgtgaaaacttaagaatcagagaggttaagtaa-ctttcccacggtcaccaagctagta----------------agcagctgaacccatgactgcctaactccagagaccagctcttaaccat-cacaatatattgtCCCC i proCoq1.NW_012133858v1 C 0 I 30 s otoGar3.GL873829 180665 234 + 608964 GGCTTCGCTCAGTTTGAtgcccagggatttacagatatc-ccgtgtttaaccctcacaatgctgtgaggtggatgctccc---ataat-ccttttactcagac-tgaaaac-taagcatctgagaggttaagtaa-ctttcctatggtcaccaagctattatataagtgctgggatcagcagctgaacccatgactgcctaactccagagaccacctcttAACCAT-CACAGTGCA-TGTCTCC i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32763394 177 + 98207768 GTCTCCACTCAGAT-----GTGAGAGATTTACAAATGTCACTGCATTGAAGCCTT-----------------AGACGACG---GAAGGCTCTTTCACTCAGATATAAAACCcccaaagtcagaccagatcaccgt---------------------tagta----agtgc-agaatcaagggctgaa--agtgactgcctgacccc-gaaacTGACCTGGAAGCAC-C-----------TCCT- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2673213 208 - 6579706 GTCCTCACTCAGTT-----CTGAGGCATT------------TAcatttactcctca--atactacaaggtagatgccactaccataatctcttttacacagatatgaaaac-caggagccagacaggctaagaaa-cttg----------ccatgctagtg----agtgctggaatcaggagttgaatccatgactggctaactccaaagactagcccttagctat-caaaatgtactgtTCTC i dasNov3.JH569502 C 0 I 3 e canFam3.chr33 2297030 66 - 31377067 I a score=272103.000000 s hg38.chr3_KI270934v1_alt 27632 27 + 163458 AGAGTCTGTC----CCGCTCCAAACCCTCTG s panTro5.chr3 2489919 27 - 202621043 AGAGTCTGTC----CCGCTCCAAACCCTCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87932 27 - 190779 AGAGTCTGTC----CCGCTCCAAACCCTCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 10497 27 + 55620 AGAGTCTGTC----CCGCTCCAAACCCTCTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2798295 27 - 123690457 AGAGTCTGTC----CTGCTCCAAACCCTCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2312271 27 - 204787373 AGAGTCTGTC----CCGCTCCAAACCCTCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192377600 27 - 192460366 AGAGTCTGTC----CCGCTCCAAACCCTCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19117127 27 - 19675229 AGAGTCTGTC----CCGCTCCAAACCCTCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16349911 27 - 16847902 AGAGTCTGTC----CCGCTCCAAACCCTCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323387 27 + 91754291 AGAGTCTGTC----CTGCTCCAAACCCTCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1373922 27 + 1977891 AGAGTCTGTC----CCGCTCCAAACCCTCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7329037 27 - 7796314 AGAGTCTGTC----CCGCTCCAAACTCTCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73802075 27 + 74750902 ACAGACTGTC----CCTCTCCAATCCCTCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17252993 27 - 17725628 ACAGACTGTC----CCTCTCCAATCTCTCTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6340958 27 + 6778120 ACAGACTGTC----CCTCTCCAATCCCTCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 16087 24 - 21398 -CAGACCG------CCTCTCCAATCCCTCTG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88360799 24 + 114275543 ACAATATGTC----CCTCTTCAATCCCT--- i micMur3.chr1 I 1 C 0 s otoGar3.GL873829 180900 24 + 608964 ACAGTATGTC----CCTCTCCAATCCCT--- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32763571 23 + 98207768 GTAGTATGTC----CTTAGATAGCATC---- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2673424 31 - 6579706 AGAGCCAAACTCCACCCCCTCTAATCCTCTG i dasNov3.JH569502 I 3 C 0 e proCoq1.NW_012133858v1 14771217 30 - 22200726 I e canFam3.chr33 2297030 66 - 31377067 I a score=1636133.000000 s hg38.chr3_KI270934v1_alt 27659 147 + 163458 CTTGTTGAAGGGAAACAAACAGAAATGAGGCCTGAACTC-TGTTGTTTTCACGCCC-CTGTCTCATGACCAAGCGGACCTGCCAGTTTCTTGCAGCTAGCGATCA--------GATGTGGAATCGGTTAGAGCCTC-C-TACCTCTG-CCCAGCCATCTT s panTro5.chr3 2489946 147 - 202621043 CTTGTTGAAGGGAAACAAACAGAAATGAGGCCTGAACTC-TGTTGTTTTCACGCCC-CTGTCTCATGACCAAGCGGACCTGCCAGTTTCTTGCAGCTAGCGATCA--------GATGTGGAATCGGTTAGAGCCTC-C-TACCTCTG-CCCATCCATCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87959 147 - 190779 CTTGTTGAAGGGAAACAAACAGAAATGAGGCCTGAACTC-TGTTGTTTTCACGCCC-CTGTCTCATGACCAAGCGGACCTGCCAGTTTCTTGCAGCTAGCGATCA--------GATGTGGAATCGGTTAGAGCCTC-C-TACCTCTG-CCCATCCATCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 10524 147 + 55620 CTTGTTGAAGGGAAACAAACAGAAATGAGGCCTGAACTC-TGTTGTTTTCACGCCC-CTGTCTCATGACCAAGCGGACCTGCCAGTTTCTTGCAGCTAGCGATCA--------GATGTGGAATCAGTTAGAGCCTC-C-TACCTCTG-CCCATCCATCTT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2798322 147 - 123690457 CTTCTTGAAGGGAAACAAACAGAAATGAGGCCTGAACTC-TGTTGTTTTCACGCCC-CTGTCTCATGACCAAGCAGACCTGCCAGTTTCTTGCAGCTAGCGATCA--------GATGTGGAATCGGTTAGAGCTTC-C-TCCCTCTG-CCCATCTGTCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2312298 134 - 204787373 CCTGTTGAAGGGAAACAAACAGAAATGAGGCCTGAACTC-TGTTGTTTTCACGCCC---GTCTCGTGACCAAGCGGACCTGCCAGTTTCTTGCAGA-AGC------------------GGAATTGGTTAGAGCCTC-C-TACCTCTG-CCCATCCGTCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192377627 134 - 192460366 CCTGTTGAAGGGAAACAAACAGAAATGAGGCCTGAACTC-TGTTGTTTTCACGCCC---GTCTCGTGACCAAGCGGACCTGCCAGTTTCTTGCAGA-AGC------------------GGAATTGGTTAGAGCCTC-C-TACCTCTG-CCCATCCGTCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19117154 136 - 19675229 CCTGTTGAAGGGAAACAAACAGAAATGAGGCCTGAACTC-TGTTGTTTTCACGCCC-CTGTCTCGTGACCAAGCAGACCTGCCAGTTTCTTGCAGA-AGC------------------GGAATTGGTTAGAGCCTC-C-TACCTCTG-CCCATCCGTCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16349938 136 - 16847902 CTTGTTGAAGGGAAACAAACAGAAATGAGGCCTGAACTC-TGTTGTTTTCACGCCC-CTGTCTCGTGACCAAGCGGACCTGCCAGTTTCTTGCAGA-AGC------------------GGAATTGGTTAGAGCCTC-C-TACCTCTG-CCCATCCGTCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323414 134 + 91754291 CTTGTTGAAGGGAAACAAACAGAAATGAGGCCTGAACTC---TTGTTTTCATGCCC-CTGTCTCGTGACCAAGCGGACCTGCCAGTTTCTTGCAGA-AGC------------------GGAATTGGTTAGAGCCTC-C-TACCTCTG-CCCATCTGTCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1373949 136 + 1977891 CTTGTTGAAGGGAAACAAACAGAAATGAGGCCTGAACTC-TGTTGTTTTCACGCCC-CTGTCTCGTGACCAAGCGGACCTGCCAGTTTCTTGCAGA-AGC------------------GGAATTGGTTAGAGCCTC-C-TACCTCTG-CCCATCCGTCTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7329064 146 - 7796314 CTTGTTGAAGGGTAACAAACAGAAATGAGGCCTGAACTC-TGTTGTTTTCACGCCC-CTGTCTCATGACCAAGCGGACCTGCCAGTTTCTTGCAGA-AGCGATCA--------GATGTGGAATCAGTTAGAACTTC-C-TACCTCTG-CCCATCCGTCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73802102 141 + 74750902 TTT----AAGGGAAACAAACAGAAAGGAGGCCTGAACTC-TGTTGTTTCCACACCC---ATCTCATGACCAAGCTGACCTGCCACTTCCTTGCAGCTGGTGATCA--------GATGTAGAATCGGTTAGAGCCTC-C-CACCTCTG-CCCATCCATCTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17253020 136 - 17725628 TTT----AAGGGAAACAAGCAGAACGGAGGCCTGAACTC-TGCTGTTTCCACA--------CTCATGACCAAGCTGACCTGCCACTTCCTTGCAGCTAGCTATCA--------GATGTGGCATCGGTTAGAGCCTC-C-CAACTCTG-CCCATCCCTCTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6340985 139 + 6778120 TTT----AAGGGAAACAAAC--AAGGGAGGCCTGACCTC-TGCTGTTTCCACACCC---ATGTCATGACCAAGCTGACCTGCCACTTCCTCGCAGCTGGCGATCA--------GATGTGGAATCGGTTAGAGCCTC-C-TACCTCTG-CCCATCCATCGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 16111 130 - 21398 TTT----AAGGGAAACAAACAGA-----------AACTC-TGCTGTTTCCACACCC---ATCTCATGACCAAGCTGACCTGCCACTTCCTTGCAGCTGGCGATCA--------GATGTGGAATCGGTTAGAGCCTC-C-CACCTCTG-CCCACCCGTCTT i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88360823 152 + 114275543 --TGTTTAAGGGAAACAAACAGAAGGGAGGCCTGAACTC-TGTTGTTTTCACACCC-CTGTCTCATGACCAGGTGGACTTGCCAGTTTCCTGCAGTTAGTGATCAGACAATCAGACGTGGGATAAGTTAGAGCCTC-C-CACC-TTG-CCCAGCCATCTG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14771247 155 - 22200726 CTGGTTTAAGGGAAACAAACAAATGGGAGGCCTGAACTCTTGTTGTTTTCACACTC-CTGTCTCATGACCAGGTGGACCTGCCAGTTTCCTGCAGTTAGCAATCAGATGATCGGATGCGAGATAAGTTAGAGCCTC-C-TGAC-CTG-CCCAGCCATCTC i proCoq1.NW_012133858v1 I 30 C 0 s otoGar3.GL873829 180924 125 + 608964 --GGTATAAGGGAAACAAACAGAAAGGAGTCCTA------------TTTTCCACCC-CTGTCTCATGACCAAGTGGACCTGTCACTTCTCTCCAGTTGTCAACCA---------------GATAAGTTAGAGCTTC-C--ACC-CTA-TCCAGCCACCTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32763594 130 + 98207768 -------AGAGGAAACAAAGGAAAATCTGGCCTCAACTC-TGTGGCTTCCACACCGGGTGTGT----ACTGAGTGAGCCTGCTGATGTCTCCCTGATGA--------------GATGTGGGATAACACAGAACCTC-CCCACCCCCA-CCCATC--TTCT i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2673455 142 - 6579706 --AGTTTAAGGAAAACCAACGAGAAGGAGGCCAGAACTC-TGTTGTTTTCACTCCT---GTCTCATGATGAAGTGGACATGCCAGTTTCTTGCAGTTAACATCCA--------GACATGGAATAAACTAGAGCCTCTC-CATCCCTACCCCACCCAT--- i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 2297030 66 - 31377067 I a score=376911.000000 s hg38.chr3_KI270934v1_alt 27806 25 + 163458 GTCCCCTCTCCTGCTCAGTG------CTGGG s panTro5.chr3 2490093 25 - 202621043 GTCCCCTCTCCTGCTCAGTG------CTGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88106 25 - 190779 GTCCCCTCTCCTGCTCAGTG------CTGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 10671 25 + 55620 GTCCCCTCTCCTGCTCAGTG------CTGGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2798469 25 - 123690457 GTCCCCTCTCCTGCTCAGTG------CTGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2312432 25 - 204787373 GTCCCCTCTGCTGCTCAGTG------CTGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192377761 25 - 192460366 GTCCCCTCTGCTGCTCAGTG------CTGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19117290 25 - 19675229 GTCCCCTCTGCTGCTCAGTG------CTGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16350074 25 - 16847902 GTCCCCTCTGCTGCTCAGTG------CTGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323548 25 + 91754291 GTCCCCTCTGCTGCTCAGTG------CTGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1374085 25 + 1977891 GTCCCCTCTGCTGCTCAGTG------CTGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7329210 25 - 7796314 GTCCCCTCTCCTGCTCATTG------CTGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73802243 25 + 74750902 GTCCCCTCTCCTGCTCAGTG------CTGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17253156 25 - 17725628 GTCTCCTCTCCTGCTCAGTG------CTGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6341124 25 + 6778120 GTCCCCTCTCCTGCTCGGTG------CCGGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 16241 25 - 21398 ATCCCCTCTCCTGCTCAGTG------CTGGG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88360975 25 + 114275543 CTCCCCTTTCCTGCTCTGTG------TTGGG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14771402 24 - 22200726 CT-CCCTCTCCTGCTTGGTG------TTGGG i proCoq1.NW_012133858v1 C 0 I 122 s otoGar3.GL873829 181049 24 + 608964 CT-CCCTCTCCTGCTGGGTC------CTGAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32763724 25 + 98207768 CTTCCTTCTCCCCCTTGGGA------CTGGC i mm10.chr16 C 0 C 0 s canFam3.chr33 2297096 31 - 31377067 gtcccctctttcccccaatgtggaaactgag i canFam3.chr33 I 66 C 0 s dasNov3.JH569502 2673597 25 - 6579706 CTCTTCTTTCTTGCTTAGTA------TTGGG i dasNov3.JH569502 C 0 C 0 a score=46980.000000 s hg38.chr3_KI270934v1_alt 27831 6 + 163458 GCTTGA- s panTro5.chr3 2490118 6 - 202621043 GCTTGA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88131 6 - 190779 GCTTGA- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 10696 6 + 55620 GCTCGA- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2798494 6 - 123690457 GCTCAA- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2312457 6 - 204787373 GCTGGA- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192377786 6 - 192460366 GCTCGA- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19117315 6 - 19675229 GCTCGA- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16350099 6 - 16847902 GCTCGA- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323573 6 + 91754291 GCTCGA- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1374110 6 + 1977891 GCTCGA- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7329235 6 - 7796314 GCTTGA- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73802268 6 + 74750902 ACTCAA- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17253181 6 - 17725628 ACTCAA- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6341149 6 + 6778120 ACTCAA- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 16266 6 - 21398 ACTCAA- i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88361000 5 + 114275543 -TTCAG- i micMur3.chr1 C 0 I 116 s otoGar3.GL873829 181073 6 + 608964 GCTCAG- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32763749 6 + 98207768 ACTGTG- i mm10.chr16 C 0 I 3 s canFam3.chr33 2297127 6 - 31377067 gcggga- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2673622 6 - 6579706 -CTCCAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14771426 122 - 22200726 I a score=1061641.000000 s hg38.chr3_KI270934v1_alt 27837 112 + 163458 CGATGGGGGCTGGCTGA--------CCCACTGACCCACTGCCCGCCTAGCTGGTTGAC--CAGCT----------------GC-----TGACCG---------GCTAG-CGGGATGA-ATGGACGCCTTG-CAAC-----CGCGAGGCAAGAGCCTGTGC s panTro5.chr3 2490124 112 - 202621043 CGATGGGGGCTGGCTGA--------CCCACTGACCCACTGCCCGCCTAGCTGGTTGAC--CAGCT----------------GC-----TGACCG---------GCTAG-CGGGATGA-ATGGACGCCTTG-CAAC-----CGCGAGGCAAGAGCCTGTGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88137 112 - 190779 CGATGGGGGCTGGCTGA--------CCCACTGACCCACTGCCCGCCTAGCTGGTTGAC--CAGCT----------------GC-----TGACCG---------GCTAG-CGGGATGA-ATGGACGCCTTG-CAAC-----CGCGAGGCAAGAGCCTGTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 10702 112 + 55620 CGATGGGGGCTGGCTGA--------CCCACTGACCCACTGCCTGCCTAGCTGGTTGAC--CAGCT----------------GC-----TGACCG---------GCTAG-CGGGATGA-ATGGATGCCTTG-CAAC-----CGCGAGGCAAGAGCCTGTGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2798500 112 - 123690457 CGATGGGGGCTGGCTGA--------CCCACTGACCCACTGCCTGCCTAGCTGGTTGAC--CAGCT----------------GC-----TGACCG---------GCTAG-CGGGATGA-ACGAACACCTTG-CAAC-----TATGAGGCAAGAGCCTGTGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2312463 112 - 204787373 CAATGGGGGTTGGCTGA--------CCCACTGACCCACTGCCCGCCTAGCTGGCTGAC--CAGCT----------------GC-----TGACCG---------GCCAG-CGGGATGA-ATGGACGCCTTG-CAAC-----CGCGAGGCAAGAGCCTGTGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192377792 112 - 192460366 CAATGGGGGTTGGCTGA--------CCCACTGACCCACTGCCCGCCTAGCTGGCTGAC--CAGCT----------------GC-----TGACCG---------GCCAG-CGGGATGA-ATGGACGCCTTG-CAAC-----CGCGAGGCAAGAGCCTGTGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19117321 120 - 19675229 CAATGGGGGTTGGCTGACCCACTGCCCCACTGACCCACTGCCCGCCTAGCTGGCTGAC--CAGCT----------------GC-----TGACCG---------GCCAG-CGGGATGA-ATGGACGCCTTG-CAAC-----CGCGAGGCAAGAGCCTGTGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16350105 120 - 16847902 CAATGGGGGTTGGctgacccactgacccactgacccactgCCCGCCTAGCTGGCTGAC--CAGCT----------------GC-----TGACCG---------GCCAG-CGGGATGA-ATGGACGCCTTG-CAAC-----CGCGAGGCAAGAGCCTGTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323579 112 + 91754291 CAATGGGGGTTGG--------CTGACCCACTGACCCACTGCCCGCCTAGCTGGCTGAC--CAGCT----------------GC-----TGACTG---------GCCAG-CGGGATGA-ATGGACGCCTTG-CAAC-----CGCGAGGCAAAAGCCTGTGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1374116 120 + 1977891 CAATGGGGGTTGGctgacccactgacccactgacccactgCCCGCCTAGCTGGCTGAC--CAGCT----------------GC-----TGACCG---------GCCAG-CGGGATGA-ATGGACGCCTTG-CAAC-----CGCGAGGCAAGAGCCTGTGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7329241 112 - 7796314 CAATGGGGGTTGGCTGA--------CCCACTGACCCACTGCCTGCCTAGCTGGCTGAC--CAGCT----------------GC-----TGACCG---------GCTAG-CGGGATGA-ACGGACGCCTTG-CAAC-----CGTGAGGCAAGAGCCTGTGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73802274 113 + 74750902 CAATGGGGGTCGGATGA--------CCAGCTGACCCACTGACTGCCTAGCTGGTTGGC--CAGCT----------------GC-----TGACCA---------GCTAGCCGGAGTGA-ATGGTTGCCTTG-CAAC-----CAGGAGGCAAGGGCCTGTTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17253187 112 - 17725628 CGATGGGGGTCAGATGA--------CCAGCTGCCCCACCGACTGCCTAGCCGGTTGAC--CAGCT----------------GC-----TGACTG---------GCTAG-CAGAGTGA-ATGGCTGCCTTG-CAAC-----CGAGAGGCAGGAGCCTATGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6341155 112 + 6778120 CGATGGGGGTCGGGTGA--------CCAGCTGACCCACTGACTGCCTAGCTGGTTGAC--CAGCT----------------GC-----TGACCG---------GCTAG-CAGAGTGA-ATGGGTGCCTTG-CAAC-----CGAGAGGCAAGACCCTGTGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 16272 112 - 21398 CGATGGGGGTCGGATGA--------CCAGCTGACCCACTGACTGCCTAGCTGGTTGAC--CAGCT----------------GC-----TGACCG---------GCTAG-CAGAGTGA-ATGGATGCCTTG-CAAC-----CGAGAGGCAAGAGCCTGTGC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 181079 66 + 608964 ------------------------------TGATTCA----------------------------------------------------GGCTG---------ACTGA-ATGAATGA-ATTCATAGCTTT-CAGTGAGTGGGTGGAGGGGGAGCCTGTGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32763758 116 + 98207768 CAATCTGAGCTGCTCAG--------CTGACTGAGCCATGGGCTACC-AGCT-GCTGAC--CGGGA----------------GCTGGGATGACTG---------ACAAA-CTCAACGA-ATGAGTAGCTTT-CAAA----ATGAGAGCGAAGAGCTTGAGT i mm10.chr16 I 3 C 0 s canFam3.chr33 2297133 115 - 31377067 agaggtgaagcaggtgg--------ctca-gggCTCCCTGCTCCCAGGGCGGCCCGCCGACGGGT----------------GC-----AGGCCGCCACCTGCCGCCGC-TGGGGTGGCACAGGCGCTGGG-C--C-----CCGACGGCGGGACC------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2673628 129 - 6579706 TGATTCTGGCTGAGTAG--------CCAGCCAACAAACTGATGGGGtggctgactgac--tagctggacagtgagtgactggc-----tgactg---------actaa-ctgaatga-atgaATAACAAGTCAAC-----TGAGAAGAAAGTCCCTGTGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14771426 122 - 22200726 I e micMur3.chr1 88361005 116 + 114275543 I a score=2644790.000000 s hg38.chr3_KI270934v1_alt 27949 168 + 163458 ACGG--CAGAGGCCT--GAGAGTCTCTCCTTT-CCTGCAGTGGAGATGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGTGTGGGAGAGGTATCGCCCTGATAGATTCCTGAATTCCAACTCAGGTAAAAGTGCCACCTTATCACACCTGAGCTGGTCTC---AAGCCCTC s panTro5.chr3 2490236 168 - 202621043 ACGG--CAGAGGCCT--GAGAGTCTCTCCTTT-CCTGCAGTGGAGATGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGTGTGGGAGAGGTATCGCCCTGATAGATTCCTGAATTCCAACTCAGGTAAAAGTGCCACCTTATCACACCTGAGCTGGCCTC---AAGCCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88249 168 - 190779 ACGG--CAGAGGCCT--GAGAGTCTCTCCTTT-CCTGCAGTGGAGATGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGTGTGGGAGAGGTATCGCCCTGATAGATTCCTGAATTCCAACTCAGGTAAAAGTGCCACCTTATCACACCTGAGCTGGCCTC---AAGCCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 10814 168 + 55620 ATGG--CAGAGGCCT--GAGAGTCTCTCCTTT-CCTGCAGTGGAGATGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGTGTCGGAGAGGTATCGCCCTGATAGATTCCTGAATTCCAACTCAGGTAAAAGTGCCACCTTATCACACCTGAGCTGGTCTC---AAGCCCTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2798612 168 - 123690457 ACGG--CAGGGGCCT--GAGCGTCTCTCCTTT-CCTGCAGTGGAGATGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGCGTGGGAGAAGTATCGCCCTGATAGATTCCTGAATTCCAACTCAGGTAAAAGTGCCACCTTATCACACCTGAGCTGGTCTC---AAGCCCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2312575 170 - 204787373 ATGA--CGGAGGCCTGAGAGAGTCTCTCGTTC-CCTGCAGTGGAGACGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGTGTGGGAGAAGTATCGCCCTGATAGATTCCTGAATTCCAGCTCAGGTAGAAGTGCCACCTTATCACCCCTGAGCTGGCCTC---AAGCCCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192377904 170 - 192460366 ATGA--CGGAGGCCTGAGAGAGTCTCTGCTTT-CCTGCAGTGGAGACGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGTGTGGGAGAAGTATCGCCCTGATAGATTCCTGAATTCCAGCTCAGGTAAAAGTGCCACCTTATCACCCCTGAGCTGGCCTC---AAGCCCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19117441 170 - 19675229 ATAA--CAGAGGCCTGAGAGAGTCTCTCCTTC-CCTGCAGTGGAGACGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGTGTGGGAGAAGTATCGCCCTGATAGATTCCTGAATTCCAGCTCAGGTAAAAGTGCCACCTTATCACCCCTGAGCTGGTCTC---AAGCCCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16350225 170 - 16847902 ATGA--CAGAGGCCTGAGAGAGTCTCTCCTTC-CCTGCAGTGGAGACGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGTGTGGGAGAAGTATCGCCCTGATAGATTCCTGAATTCCAGCTCAGGTAAAAGTGCCACCTTATCACCCCTGAGCTGGTCTC---AAGCCCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323691 170 + 91754291 ATGA--CAGAGGCCTGAGAGAGTCTCTCCTTC-CCTGCAGTGGAGATGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGTGTGGGAGAAGTATCGCCCTGATAGATTCCTGAATTCCAGCTCAGGTAAAAGTGCCACCTTATCACCCCTGCGCTGGTCTC---AAGCCCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1374236 170 + 1977891 ATGA--CAGAGGCCTGAGAGAGTCTCTCCTTC-CCTGCAGTGGAGACGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGTGTGGGAGAAGTATCGCCCTGATAGATTCCTGAATTCCAGCTCAGGTAAAAGTGCCACCTTATCACCCCTGAGCTGGTCTC---AAGCCCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7329353 170 - 7796314 ACAG--CGGAGGCCTGAGAGAGTCTCTCCTTT-TCTGCAGTGGAGACGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGTGTGGGAGAAGTATCGCCCTGATAGATTCCTGAATTCCAGCTCAGGTAAAAGTGCCACCTTATCGCACCTGAGCTGGTCTC---AAGCCCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73802387 169 + 74750902 CTGG--CAGAGGCCT--GAGCATCTTTCCTTTGCCTGCAGCGGAGATGGCTATTTTGAAAACAGCCCACTGATGTCCCAGCCAGTGTGGGAGAAGTATCGCCCCGACAGGCTCCTGAATTCCAACTTAGGTAAAAGTGCCACCTTATCACACCTGAGCTGGTCTC---AAGCCCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17253299 169 - 17725628 CTGG--CAGAGGCCT--GAGCGTCTTTCCTTTGCCTGCAGCGGAGATGGCTCTTTCGAAAATAGCCCACTGATGTTCCAGCCAGTGTGGGAGAAGTATCGCCCTGACAGGCTCCTGAATTCCAACTTAGGTAAAAGTGCCACCTTACCACACCTGAGCTGGTCTC---GAGGCCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6341267 156 + 6778120 ATGG--CAGAGGCCT--GAGCATCTTTCCGTTGCCTGCAGCGGAGATGGCCATTTCGAAAACAGCCCACTGATGTTCCAGCCAGTGTGGGAGAAGTATCGCCCTGACAGGCTCCTGAATTCTGACTTAGGTAAAAGTGCCACCTTGTCGCACCTGAGCTG---------------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 16384 165 - 21398 ATGG--CAGAGGCCT--GAGCGTCTTTCCTTTGCCTGCAGCGGAGATGGCTATTTCGAAAACAGCCCACTGATGTTCCAGCCAGTGTGGGAGAAGTAT---GCTGACAGGCTCCTGAATTCCAACTTAGGTAAAAGTGCCCACTTATCACACCTGAGCTGGTCTC----AGCTCTT i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88361121 169 + 114275543 GTGG--CAGAGGCCT--GAGGGTCTTCCCTTTGCCTGCAGTGGAGACGGGTATTTCAAAAACAGCCCACTGATGTCCCGGCCACTGTGGGAGAGGTATCGTCCAGACCAATTCCTGGATTCCAACTCAGGTAAAAGTGCTACCTTGTCACTCTTGAGCTGGTCTC---AGGCCCTC i micMur3.chr1 I 116 I 1594 s proCoq1.NW_012133858v1 14771548 169 - 22200726 GTGG--CAGAGGCCT--GAGGGTCTTCCCTTTGCCTGCAGTGGAGACGGGTATTTTGAAAACAGCCCGCTGATGTCCCAGCCATTGTGGGAGAGGTATCGTCCAGACCAATTCCTGGATTCCAACTCAGGTAAAAGTGTCACTTTGTCACTCTTGAGCTGGTCTC---AGGCCCTC i proCoq1.NW_012133858v1 I 122 I 1561 s otoGar3.GL873829 181145 161 + 608964 ATGG--CAGAGGCCT--GAGAGTCTTCCTTTTGCCTGCAGTGGAGACGGGTATTTTGAAAACAGCCCACTGATGTCCCGGCCACTGTGGGAGAGGTATCGTCCGGACCGATTTCTGAATTCCAACTTAGGTAAAAGTATCACCTTGTAACACTTGAGCTGGTCTC----------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32763874 167 + 98207768 GTGACCCAGAGGCCT----GAGTCTTTCCTTTGCCTGCAGTGGAGATGGGTATTTTGAAAACAGCCCGCTGACATTCCGGCCAGCAATGGAGAAGTACCGTCCAGATCGATTCCTGAATTCCAAATTAGGTAAAAGTGCCACC-CACCACATACGAGCTGGCTTC---AGGCTTC- i mm10.chr16 C 0 C 0 s canFam3.chr33 2297248 164 - 31377067 GCCG--CGACAGCCT-----GGCTTCTCCCCCGCCCGCAGCGGAGACGGGCTCTGCGGCCACAGCGCGCTGTCCTCTGGGCCCACGTGGAAGAGGTACCAGCCCGACCGGCTCCTGAACACCCACACAGGTAACAGCGCCCCG----CACACCTG-GCTGGACCCTAAATGCCCTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2673757 168 - 6579706 ATGA--CAGAGGCCT--AAGATTCTTTCTCTTCCCTGCAGTGGAGATGGGTATTCCCAAAATAGTCCACTGACATCCCAACCAAATTGGAAGAAGTATCGTCCAGACCAATTCCTGAATCCCAACTCAGGTAAAAGTG-CACTTTCTCATATTTGAGCTGGTCTC---AAGTCCTC i dasNov3.JH569502 C 0 C 0 a score=2984150.000000 s hg38.chr3_KI270934v1_alt 28117 288 + 163458 GC-----------------------------------GTGTCCTCCAGCCC--ATACACCATCGCAGTCCTAGAG-GGCACCTCCCTAACATCACGGCCATCCTGAAGGGCCTCCCCCACACAGTTCAACCTCCTACAGGTCTAGGTGGGATGTGGCACCA-CCCAGGGAGCAGCTGGCACCTCCTGCACCCCTGGACACAGCACAGTCTCAGAGGGGGCT-ACATCTCCTCCCTCAGATGA-ACC-AGCCCAAGAGGGCTCTCG------GGGGGCCCAGATCCTGGA--AGTGAGGACA-----GGGTC-TTGTGGGAGGT-GGGA-TTTGAATGGGCAGTTCA s panTro5.chr3 2490404 323 - 202621043 GCGTGTCCCCCAGCCCATACACCATCACAGTCCTCGTGTGTCCTCCAGCCC--ATACACCATCGCAGTCCTAGAG-GGCACCTCCCTAACATCACGGCCATCCTGAAGGGCCTCCCCCACACAGTTCAACCTCCTACAGGTCTAGGTGGGATGTGGCACCG-CCCAGGGAGCAGCTGGCACCTCCTGCACCCCTGGACACAGCACAGTCTCAGAGGGGGCT-ACATCTCCTCCCTCAGATGA-ACC-AGCCCAAGGGGGCTCTCG------GGGGGCCCAGATCCTGGA--AGTGAGGACA-----GGGTC-TTGTGGGAGGT-GGGA-TTTGAATGGGCAGTTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88417 323 - 190779 GCGTGTCCCCCAGCCCATACACCATCACAGTCCTCGCGTGTCCTCCAGCCC--ATACACCATCGCAGTCCTAGAG-GGCACCTCCCTAACATCACGGCCATCCTGAAGGGCCTCCCCCACACAGTTCAACCTCCTACAGGTCTAGGTGGGATGTGGCACCG-CCCAGGGAGCAGCTGGCACCTCCTGCACCCCTGGACACAGCACAGTCTCAGAGGGGGCT-ACATCTCCTCCCTCAGATGA-ACC-AGCCCAAGAGGGCTCTCG------GGGGGCCCAGATCCTGGA--AGTGAGGACA-----GGGTC-TTGTGGGAGGT-GGGA-TTTGAATGGGCAGTTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 10982 286 + 55620 GT-----------------------------------GTGTCCTCCAGCCC--ATACACCATTGCAGTCCTAGAG-GGCACCTCCCTAACATCAC-ACCATCCTGAAGGGCCTCCCCCACACAGTTCAACCTCCTACAGGTCTAGGTGGGATGTGGCACCG--CCAGGGAGCAGCTGGCACCTCCTGCACCCCTGGACACAGCACAGTCTCAGAGGGGGCT-ACATCTCCTCCCTCAGATGA-ACC-AGCCCAAGAGGGCTCTCA------GGGGGCCCAGATCCTGGA--AGTGAGGACA-----GGGTC-TCGTGGGAGGT-GGGA-TTTGAATGGACAGTTCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2798780 286 - 123690457 GT-----------------------------------GTGTCCTCCAGCCC--ATACACCATCGCAGTCCTAGAG-GGCACCTCACTAACATCACTGCCATCCTGAAGGGCCTCCCC--CACAGTCCAACCTCCTACAGGTCTAGGTGGGATGTGGCACCG-CCCAGGGAGCAGCTGGCACCTCCTGCACCCCTGGACACAGCACAGTCTCAGAGGGGGCTAACATCTCCTGCCTCAGATGA-ACC-AACCCAAGAGGGCTCTCG------GGGGGCCCAGATCCT-GA--AGTGAGGACC-----GGGTC-TTGTGGGAGGT-GGGA-TTTGAATGGGCAGTTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2312745 289 - 204787373 GT-----------------------------------GTGTCCTCCAGCCC--ACACACCACCGCAGTCCTAGAG-GGCCGCTCCCTAACGTCACCACCGTCCTGAAGGGCCTCCCCTGCACAGTCCAACCTCCTACAGGTCTAGGTGGGATGTGGCACCG-CCCAGGGGGCCGCTGGTACCTCCTGCACCCCTGGACACAGCACAGTCTCAGAGGGGGCT-ACATCTTCTCCCTCAGATGA-ACC-AACCCAAGAGGGCTCTCAG-----GGGGGCCCAGATCCCAGA--AGTGAGGACA-----GGGTC-TTGTGGGAGGT-GGGA-TTTGAATGGGCAGTTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192378074 289 - 192460366 GT-----------------------------------GTGTCCTCCAGCCC--ACACACCACCGCAGTCCTAGAG-GGCCGCTCCCTAACGTCACCACCGTCCTGAAGGGCCTCCCCTGCACAGTCCAACCTCCTACAGGTCTAGGTGGGATGTGGCACCG-CCCAGGGGGCCGCTGGTACCTCCTGCACCCCTGGACACAGCACAGTCTCAGAGGGGGCT-ACATCTTCTCCCTCAGATGA-ACC-AACCCAAGAGGGCTCTCAG-----GGGGGCCCAGATCCCAGA--AGTGAGGACA-----GGGTC-TTGTGGGAGGT-GAGA-TTTGAATGGGCAGTTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19117611 289 - 19675229 GT-----------------------------------GTGTCCTCCAGCCC--ACACACCACCGCAGTCCTAGAG-GGCCGCTCCCTAACGTCACCACCGTCCTGAAGGGCCTCCCCTGCACAGTCCAACCTCCTACAGGTCTAGGTGGGATGTGGCACCG-CCCAGGGGGCCGCTGGTACCTCCTGCACCCCTGGACACAGCACAGTCTCAGAGGGGGCT-ACATCTTCTCCCTCAGATGA-ACC-AACCCAAGAGGGCTCTCAG-----GGGGGCCCAGATCCCAGA--AGTGAGGACA-----GGGTC-TTGTGGGAGGT-GAGA-TTTGAATGGGCAGTTCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16350395 289 - 16847902 GT-----------------------------------GTGTCCTCCAGCCC--ACACACCACTGCAGTTCTAGAG-GGCCGCTCCCTAACGTCACCACCGTCCTGAAGGGCCTCCCCTGCACAGTCCAACCTCCTACAGGTCTAGGTGGGATGTGGCACCG-CCCAGGGGGCCGCTGGTACCTCCTGCACCCCTGGACACAGCACAGTCTCAGAGGGGGCT-ACATCTTCTCCCTCAGATGA-ACC-AACCCAAGAGGGCTCTCAG-----GGGGGCCCAGATCCTGGA--AGTGAGGACA-----GGGTC-TTGTGGGAGGT-GGGA-TTTGAGTGGGCAGTTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91323861 288 + 91754291 GT-----------------------------------GTGTCCTCCAGCCC--ACACACCACCGCAGTCCTAGAG-GGCCGCTCCCTAACGTCACCACCATCCTGAAGGGCCTCCCCTGCACAGTCCAACCTCCTACAGGTCTAGGTGGGATGTGGCACCG-CCCAGGGGGCCGCTGGTACCTCCTGCACCCCTGGACACAGCACCGTCTCAGA-GGGGCT-ACGTCTTCTCCCTCAGATGA-ACC-AACCCAAGAGGGCTCTCAG-----GGGGGCCCAGATCGCAGA--AGTGAGGACA-----GGGTC-TTGTGGGAGGT-GGGA-TTTGAATGGGCAGTTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1374406 289 + 1977891 GT-----------------------------------GTGTCCTCCAGCCC--ACACACCACCGCAGTCCTAGAG-GGCCGCTCCCTAACGTCACCACCGTCCTGAAGGGCCTCCCCTGCACAGTCCAACCTCCTACAGGTCTAGGTGGGATGTGGCACTG-CCCAGGGGGCCGCTGGTACCTCCTGCACCCCTGGACACAGCACAGTCTCAGAGGGGGCT-ACATCTTCTCCCTCAGATGA-ACC-AACCCAAGAGGGCTGTCAG-----GGGGGCCCAGATCCTGGA--AGTGAGGACA-----GGGTC-TTGTGGGAGGT-GGGA-TTTGAATGGGCAGTTTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7329523 282 - 7796314 GT-----------------------------------GTGTCCTCCAGCCC--ACACACCACCGCAGTCCTAGAG-GGCGGCTCCCTAATGTCACCACCGTCCTGAAGGG-CTTCCCTGCACAGTCCAACCTCCTACAGGTCTAGGTGGGATGTGGCACCA-CCCAGGGGGCAGCTGGTACCTCCTGCACCCCTGGACACAGCACAGTCT--GAGGGGGCT-ACA---TCTCCCTCAGATGA-ACC-AACCCAAGAGGGCTCTCA------GGGGGCCCAGATCCTCGA--AGTGAGGACA-----GGGTC-TTGTGGGAGGT-AGGA-TTTGAATGGGCAGTTCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73802556 288 + 74750902 GT-----------------------------------TTGTCCTCCAGCCC--ATATGCCATCACAGTCCTAGAG-GGCAGCTCCCGGGCATCACCACCATCTTGAAGGGTGTCCCCCACACAGTCCAACCTCCTACAGGTCTAAGTGGGACATGGCACTG-CCCAGGGAGCAGCTGGCATCTTCTGCACCCCTGGACACAGCACAGTCTCAGAGGGGGCT-ACATCTCCTCCCTCGGATGT-ACC-AACCCAAGAGGGCTCTC-G-----GGGGGTCCAGCTCCTGGA--AGTGAAGACA-----GGGCC-TTGTGGGAGGT-GGGA-TGTAAATGGGTAGAATG i calJac3.chr17 C 0 I 240 s saiBol1.JH378146 17253468 289 - 17725628 GT-----------------------------------TTGTCCTCCAGCCC--AGATGCCATCGCAGTCCTAGGG-GGCAGCTCCCTGGTATCACCACCATCTTGAAGGGCATCCCCCACACAGTCCAACCTCCTAGAAGTCTAAGTGGGACATGGCACTG-CCCAGGGAGCAGCTGGCACCTTCTGCACCCCTGGATGCAGCACAGTCTCAGAGGGGGCT-GCATCTCCTCCCTCGGATGT-ACC-AACCCAAGGGGGCTCTCAG-----GGGGGCCCAGCTCCTGGA--AGTGAGGGCA-----GGGTC-TTGTGGGAGGT-GGGA-TATAAATGGGTAGAATG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6341423 285 + 6778120 ---------------------------------------GTCCTCCAGCCCATATATGCCATTGCAGTCCTAAGG-GGCAGCTCCCTGGCATCACCACCATCTCGAAGGGCATCCCCCACACAGTCCAACCTCCTACAGGTCTAAGTGCGACATGGCCCTG-CCCAGGGAGTAGCTGGCACCTTCTGCACCCCTGGACACAG--CAGTCTCGGAGGGGGCT-GCATCTCCTCCCTCGGATGT-ACC-AACCCAAGAGGGCTCTCAG-----GGGGGCCCAGCTCCTGGA--AGTGAGGACA-----GGGTC-TTGTGGGAGGT-GGGA-TATAAATGGGTAGAATG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 16549 284 - 21398 GT-----------------------------------TTGTCCTTCAGCCCATATGTGCCGTCGCAGT-CTAGAG-GGCAGCTCCCTGGCATCACCACTATCTTGAAGGGCATCCCCCACACGGTCCAACCTCCTACAGGTCTAA-TGGGACGTGGCACTG--CCAGGGAGCAGCTGGCACCTTCTGCACCCCCGGACACAGCACAGTCTCAGAGGGGGCT-ACAT---CTCCCTCGGATGT-A-C-AACCCAAGAGGACTCTCAG-----GGGGGCCCAGCTCCTGGA--AGTGAGGACA-----GGGTC-TTGTGGGAGGT-GGGA-TATAAATGGGTAGAATG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 181306 242 + 608964 ----------------------------------------TGCTTC-------CTATGTCATGGCAGTCCTAGAG-GGCAGCTCCC-AGAGTCTCCACCCTTCCCCAGGGTATCCC--ACACAGCGGGACCTCCCGCAGGTCTGTGCAGGATGTGGCCCTGCCCCGGGGAGCAGCAGGTACATGCTACATACCGAGACATAGTACAGTCCCA-AGAGGGCT-TCCTGT-------------------------------------------GGGGGCCCAGATCCTGGG--AGTGAGGACA----GGGGTA-TTGTGGGAGGCAGGGG-TCTGAAGGGGCAGTCCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32764041 259 + 98207768 -----------------------------------CCTTGCCCTCTATACC--ATATGCCATGACAGTCCTAGAC-AGATG-----TAACCTCTCCATCACCCCGAAGAGCATCCT--GCACAAACCAGCCACCTACAGGT--------------GCATCC---------ACAGTTAATCCTGCCTGGACCTTTTCATAC-TCTCAGCCCCTA-------T-AAATCTTATTCTGTAGAAGAGACA-AACCCAGAATGTCTGTCTATCTGTAGGCACCCTGGTCCTGGAGTGGGGATGACA-----AGGTCACTGCAGGAAGG-GAGA-TAGGTGTGG--AGTTAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2297412 268 - 31377067 --------------------------------------TGTCCTCCG--CC--ATGCGGCGCGGGGGTCCTCGAGCCGCGGCTCCC-GGCGTCTCCTCCATCCCACGGGG--GTCCCCGGACAGGGCGGCTCCAC-----TATGATCAGGACCTGCCCCCC-CGCCCGGGACACCAGG-ACCTTCTGGGCCCTCGGGTGGGGCA---TCTTGGGCGGGGCG-AGGTCTCCGCC-----GGGG-ACC-AGCCGAACCCAGCTCTCG------GGGAGGCCGGGTCCTGGA--GGTGACAACA-----GGGCC-GCGCAGGAGGT-GGGGCTATGCGTGGGCAGTTAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2673925 273 - 6579706 -----------------------------------TTTATTCTTCCACTCC--AGATACC------------GAG-G------------CATCTTTACCATCCCTAAAGATGTCATCAGCATAGTATGACCTCCAAAAGATGCAATCAGATCTTGGCACTG-CCCAGGGAGCAGCTGTTACCTTCTGTACCCTCAGACACAGTACAGTCTCATTTGGAGAT-ATGTCTCCCCTCTGGGATGA-TCCAAACCCAGACAGTCTCTCCAT----GGGGGGCCAGATCCGGAA--AGTGATGACAGACAGGGGTA-TTGTAGGAGGT-GGGAATATGAATGGCCAGTTAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e micMur3.chr1 88361290 1594 + 114275543 I a score=819463.000000 s hg38.chr3_KI270934v1_alt 28405 68 + 163458 GACAATAC-TCC-AAGTGTCCTG-TCCAGAGCAGGAATGAGAACCCAGGTGAGATCCTTTAAGAAAATCTA s panTro5.chr3 2490727 68 - 202621043 GACAATAC-TCC-AAGTGTCCTG-TCCAGAGCAGGAATGAGAACCCAGGTGAGATCCTTTAAGAAAATCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88740 68 - 190779 GACAATAC-TCC-AAGTGTCCTG-TCCAGAGCAGGAATGAGAACCCAGGTGAGATCCTTTAAGAAAATCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 11268 68 + 55620 GACAATAC-TCC-AAGTGTCCTG-TCCAGAGCAGGAATGAGAACCCAGGTGAGATCCTTTAAGAAAATCTA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799066 68 - 123690457 GACAATAC-TCC-AAGTGTCCTG-TCCAGAGCAGGAATGAGAACCCAGGTGAGATCCTTTAAGAAAATCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2313034 68 - 204787373 GACAATTC-TCC-AAGTGTCCTG-CCCAGAGCAGGAATGAGAACCCAGGTGAGATCCTTTAAGAAAATCTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192378363 68 - 192460366 GACAATTC-TCC-AAGTGTCCTG-CCCAGAGCAGGAATGAGAACCCAGGTGAGATCCTTTAAGAAAATCTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19117900 68 - 19675229 GACAATTC-TCC-AAGTGTCCTG-CCCAGAGCAGGAATGAGAACCCAGGTGAGATCCTTTAAGAAAATCTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16350684 68 - 16847902 GACAATTC-TCC-AAGTGTCCTG-TCCAGAGCAGGAATGAGAACCCAGGTGAGATCCTTTAAGAAAATCTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91324149 68 + 91754291 GACAATTC-TCC-AAGTGTCCTG-CCCAGAGCAGGAATGAGAACCCAGGTGAGCTCCTTTAAGAAAATCTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1374695 68 + 1977891 GACAATTC-TCC-AAGTGTCCTG-CCCAGAGCAGGAATGAGAACCCAGGTGAGATCCTTTAAGAAAATCTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7329805 68 - 7796314 GACAATTC-TCC-AAGTATCCTG-TCCAGAGCAGGAATGAGAACCCAGGTGAGATCCTTTAAGAAAATCTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73803084 69 + 74750902 GACAGTAC-TCCCAAGTGTCCTG-TCCAGAGCTGGAATGAGAACCCAGGGGAGATCCCTTAAGAAAATCTA i calJac3.chr17 I 240 C 0 s saiBol1.JH378146 17253757 66 - 17725628 GACAATAC-TCCCAAGTGTCCTG-TCCAGAGCTGGAATGAGAACCGAGGGGAGATCCCTT---AAAATCTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6341708 69 + 6778120 GACAATAC-TCCCAAGTGTCCTG-TCCAGAGCTGCAATGAGAACCCAGGGGAGATCCCTTAAGAAAATCTA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 16833 69 - 21398 GACAATAC-TCCAAAGTGTCCTG-TCCAGAGCTGGAATGAGAACCCAGGGGAGATCCCTTAAGAAAATCTA i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 181548 67 + 608964 GAAAATAC-AAT-AGGTGTCTTG-TCCCAAGGCTGGAAAGGAACCCAGATGAGATCCCTTAGGGGAAT-TA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32764300 57 + 98207768 GATAACACATAT-AAATACCCAATTCCAGAGCTGGAGTAAGATCC-------------TTAAAGATATCTA i mm10.chr16 C 0 C 0 s canFam3.chr33 2297680 65 - 31377067 GCCGCTAC-TCC-AGGTGGCC-G-AGCGGAGCTGGA--GGGCGTCCGGGTGAGATCCCAGAAGGGACCCTA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2674198 69 - 6579706 GACACTAC-TGC-AAGCGTCCTGTCCCAGGACTGGGATGGGAACCCAGATGAGATCCTTCAAGGGAATCAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e micMur3.chr1 88361290 1594 + 114275543 I a score=39477.000000 s hg38.chr3_KI270934v1_alt 28473 9 + 163458 CCggct-ggg s panTro5.chr3 2490795 9 - 202621043 CCAgct-ggg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88808 9 - 190779 CCggct-ggg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 11336 9 + 55620 CCggct-ggg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799134 9 - 123690457 CTggct-ggg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2313102 10 - 204787373 CCggccgggg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192378431 10 - 192460366 CCggccgggg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19117968 10 - 19675229 CCggccgggg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16350752 9 - 16847902 CCggcc-ggg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91324217 9 + 91754291 CCggcc-ggg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1374763 9 + 1977891 CCggcc-ggg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7329873 9 - 7796314 CCggcc-ggg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73803153 8 + 74750902 CT-GTT-ggg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17253823 8 - 17725628 CT-gct-ggg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6341777 8 + 6778120 CT-gct-ggg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 16902 8 - 21398 CT-gct-ggg i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 181615 6 + 608964 CCCGCA---- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2674267 9 - 6579706 CCAACG-AGG i dasNov3.JH569502 C 0 I 1142 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e mm10.chr16 32764357 0 + 98207768 C e micMur3.chr1 88361290 1594 + 114275543 I e canFam3.chr33 2297745 0 - 31377067 C a score=1487091.000000 s hg38.chr3_KI270934v1_alt 28482 169 + 163458 cgccatggctcacacctgtaatcccagcattttgggaggctgaggtgggcggatcacttgagatcaggagttcgagaccagcctggccaacatggtgaaattctgtctctactaaaaatacaaaaattagccagacgttgtggtgcacacctgtaattccagctactca s panTro5.chr3 2490804 169 - 202621043 cgccatggctcacacctgtaatcccagcactttgggaggctgaggtgggcggatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaattctgtctctactaaaaatacaaaaattagccagacgttgtggcgcacacctgtaattccagctactca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88817 169 - 190779 cgccacggctcacacctgtaatcccagcactttgggaggctgaggtgggcggatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaattctgtctctactaaaaatacaaaaattagccagacgttgtggcgcacacctgtaattccagctactca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 11345 168 + 55620 caccatggctcacacctgtaatcccagcactttgggaggctgaggtgggcggatcacttgaggtcaggagtgcg-gaccagcctggccaacatggtgaaattctgtctctactaaaaatacaaaaattagccagacattgtggcacacacctgtaattccagctactca i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799143 169 - 123690457 cgccgtggctcacacctgtaatcccagcactttgggaggctgaggtgggcagatcacttgaggtcaggagttcgagaccagcctggccagcatggtgaaattctgtctctagtaaaaatacaaaaattagctgggcgttgtggcgcacacctgtaattccagctactca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2313112 169 - 204787373 tgcggtggctcacgcctgtgatcccagcactttgggaggccgagatgggtggatcacctgaggtcaggagtttgagaccagcctgggcaacatggtgaaactctgtctctactaaatacacaaaaattagccaggcattgtagcgcacacctgtaattccagctactcg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192378441 169 - 192460366 tgtggtggctcacgcctgtgatcccagcactttgggaggccgaggtgggtggatcacctgaggtcaggagtttgagaccagcctgggcaacatggtgaaactctgtctctactaaatacacaaaaattagccaggcattgtagcgcacacctgtaattccagctactcg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19117978 166 - 19675229 tgtggtggctcacgcctgtgatcccagcactttgggaggcc---gtgggtggatcacctgaggtcaggagtttgagaccagcctgggcaacatggtgaaactctgtctctactaaatacacaaaaattagccaggcattgtagcgcacacctgtaattccagctactcg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16350761 169 - 16847902 cgcggtggctcacgcctgtgatcccagcactttggaaggccgaggtgggtggatcacctgaggtcaggagtttgagaccagcctgggcaacatggtgaaactctgtctctactaaatacacaaaaattagccaggcattgtagcgcacacctgtaattccagctactcg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91324226 169 + 91754291 cgcagtggctcacgcctgtgatcccagcactttgggaggctgaggtgggcggatcacttgaggtcaggagtttgagacccgcctgggcaacatggtgaaactctgtctctactaaatacacaaaaattagccgggcatcgtagcgcacacctgtaattccagctactcg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1374772 169 + 1977891 cgcggtggctcacgcctgtgatccctgcactttgggaggctgaggtgggcggatcgcctgaggtcaggagtttgagaccagcctgggcaacatggtgaaactctgtctctactaaaaacacaaaaattagccgggcatcgtagcgcacacctgtaattccagctactcg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7329882 169 - 7796314 tgctgtgactcacgcctgtaatcacagcactttgggaggctgaggcgggtggatcacttgaggtcaggagtttgagaccagcctgaccaacatggtgaaactgtgtctctactaaaaacacaaaaattagccgggcgttgtagcgcacacctgtaattccagctactcg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73803161 161 + 74750902 caagatggttcatgcctgtaatcccggcactttgggaggtcgaggt-ggcagatcacttgaggtcaggagttcgagaccagcctgggcaacagggtgaaac-------ctgctaaaaacacacaaattagccaggcgttgtggtgcacacctgtaatcccagctactca i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17253831 168 - 17725628 caaggtggctcatgcctgtaatcccagcactttgggaggttgaggt-ggcagatcacttgaggtcaggagttcgagaccagcctgggcaacagggtgaaaccctgtctctactaaaaacacaaaaattagccaggtgttgtggtgcacacctgtaatcccagctactca i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6341785 168 + 6778120 caaggtggctcacgcctgtaatcccagcactttgggaggttgaggt-ggcagatcacttgaggtcaggagttcgagaccagcctgggcaacagggtgaaaccctgtctctactaaaaacacaaaaattagccaggtgttgtggtgcacaattgtaatcccagccactca i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 16910 168 - 21398 caaggtggctcacgcctgtaatcccagcactttgggaggtcgaggt-ggcagatcacttgaggtcaggagttcaggaccagcctgggcaacagggtgaaaccctgtctctactaaaaacacaaaaattagccaggcgttgtggtgcacacctgtaatcccagttactca i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 181621 19 + 608964 -----------------------------------------------------------GAGGTCTGGTGttc-------------------------------------------------------------------------------------------actca i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2297745 92 - 31377067 -----------------------CCAACA-----GGAGGTC-----------------------CAGGAGCCTGA----CGTGCAGTCATCGTCACGGAAGCACGTCTCCACCTGCTGCGT--------GCTGCACGCTGTGCTGAGAGCCAGGA-------------- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e mm10.chr16 32764357 0 + 98207768 C e micMur3.chr1 88361290 1594 + 114275543 I e dasNov3.JH569502 2674276 1142 - 6579706 I a score=84673.000000 s hg38.chr3_KI270934v1_alt 28651 10 + 163458 ataggttgag s panTro5.chr3 2490973 10 - 202621043 agaggctgag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88986 10 - 190779 agaggctgag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 11513 10 + 55620 agaggctgag i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799312 10 - 123690457 agaggctgag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2313281 10 - 204787373 agaggctgag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192378610 10 - 192460366 agaggctgag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19118144 10 - 19675229 agaggctgag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16350930 10 - 16847902 agaggctgag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91324395 10 + 91754291 agacgctgag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1374941 10 + 1977891 agaggctgag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7330051 10 - 7796314 agaggctgag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73803322 10 + 74750902 gcaggctgag i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17253999 10 - 17725628 ggaagttgag i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6341953 10 + 6778120 ggaggttgag i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 17078 10 - 21398 ggaggttgag i aotNan1.NW_018492867v1 C 0 C 0 s canFam3.chr33 2297837 6 - 31377067 GTAGGA---- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e mm10.chr16 32764357 0 + 98207768 C e micMur3.chr1 88361290 1594 + 114275543 I e dasNov3.JH569502 2674276 1142 - 6579706 I e otoGar3.GL873829 181640 0 + 608964 C a score=655124.000000 s hg38.chr3_KI270934v1_alt 28661 76 + 163458 gcaggagaattgtttgaacctggg-aggtggaggttgcagcgagccgagatcgcgccactgcactccagcc----tgggtg s panTro5.chr3 2490983 76 - 202621043 gcaggagaattgtttgaacctggg-aggtggagtttgcagcgagccgagatcgcgccactgctctccagcc----tgggtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88996 76 - 190779 gcaggagaattgtttgaacctggg-aggtggagtttgcagcgagccgagatcgcgccactgctctccagcc----tgggtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 11523 77 + 55620 gcaggagaattgtttgaacctgggaaggtggaggttgcagcgagccgagatcgcgccactgctctccagcc----tgggtg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799322 76 - 123690457 gcaggagaattgtttgaacctggg-aggtggaggttgcagcgagccgagatcacgccactgcactccagcc----tgggtg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2313291 76 - 204787373 gcagcagaatcgtttgaacccggg-aggtggaggttgcagcgagccgagatcgctccactgcactcccgcc----tgggtg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192378620 76 - 192460366 gcaggagaatcgtttgaacccggg-aggtggaggttgcagcgagccgagatcgctccactgcactcccgcc----tgggtg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19118154 76 - 19675229 gcaggagaatcgtttgaacccggg-aggtggaggttgcagcgagccgagatcgctccactgcattcccgcc----tgggtg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16350940 76 - 16847902 gcaggagaatcgtttgaacccggg-aggtggaggttgcagcgagccgagatcgctccactgcactcccgcc----tgggtg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91324405 76 + 91754291 gaaggagaatcgtttgaacccgga-aggtggaggttgcagcgagccgagatcactccactgcactcccgcc----tgggtg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1374951 76 + 1977891 gcaggagaatcgtttgaacccggg-aggtggaggttgcagcgagccgagatcgctccactgcactcccgcc----tgggtg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7330061 76 - 7796314 gcaggagaatcgtttgaacccggg-aggtggaggttgcagcaagccgagatcgctccactgcactcccgcc----tgggtg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73803332 75 + 74750902 gcaggacaatcttttgaacctggg-a-gaggaggttgcagtgagccgagatcacattactgcactccagcc----tggatg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17254009 80 - 17725628 gcaggagaatcgtttgaacctggg-agggggaggttgcagtgagccgagatctcattactgcactccaggctgggtgggtg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6341963 79 + 6778120 gcaggagaatcatttgaacctggg-agggggaggttgcagtgagcagagatcgcattactgcactccagcctgggtgg-tg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 17088 59 - 21398 gcaggagaatcgtttgaacctggg-a-----------------gccgagatcacattactgctctccagcc----tgggtg i aotNan1.NW_018492867v1 C 0 C 0 s mm10.chr16 32764357 32 + 98207768 GCAGGAGAC----------------A--------TTGCAAAGGGCTGGcat----ttact--------------------- i mm10.chr16 C 0 I 2 s canFam3.chr33 2297843 62 - 31377067 AGGGGAGGAATGggggcgcccggg-ggg-------ctcagtg-gctgagcgc------ctgccttccaccc----agggcg i canFam3.chr33 C 0 I 187 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e micMur3.chr1 88361290 1594 + 114275543 I e dasNov3.JH569502 2674276 1142 - 6579706 I e otoGar3.GL873829 181640 0 + 608964 C a score=496248.000000 s hg38.chr3_KI270934v1_alt 28737 68 + 163458 acagagtgagactccatctcaaaaagagagaaTCCACCAAGAAGAGGCCCGGGGGTCTCAcgttcatt s panTro5.chr3 2491059 68 - 202621043 acagagtgagactccatctcaaaaagagagaaTCTACCAAGAAGAGGCCCGGAGGTCTCAcgttcatt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89072 68 - 190779 acagagtgagactccatctcaaaaagagagaaTCTACCAAGAAGAGGCCTGGAGGTCTCAcgttcatt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 11600 68 + 55620 acagagtgagactccatctcaaaaagagagaaTCTACCAAGAAGAGGCCCGAAGGTCTCACGTTCATT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799398 68 - 123690457 acagagtgagactccgtctcagaaagagagaaTCTACCAGGAAGAGGCCCGGAGGTCTCAcattcatt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2313367 59 - 204787373 acagagcgagactccatctcagaaagagagaaTCTACGAAGGAGAGGCCG---------Acattcatc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192378696 59 - 192460366 acagagcgagactccatctcagaaagagagaaTCTACGAAGGAGAGGCCG---------Acattcatc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19118230 59 - 19675229 acagagcgagactccatctcagaaagagagaaTCTACGAAGGAGAGGCTG---------Acattcatc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16351016 59 - 16847902 acagagcgagactccatctcagaaagagagaaTCTACGAAGGAGAGGCCG---------Acattcatc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91324481 59 + 91754291 acagagcgagactccatctcagaaagagagaaTCTACGAAGGAAAGGCCG---------Acattcatc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1375027 59 + 1977891 acagagcgagactccatctcagaaagagagaaTCCACGAAGGAGAGGCCG---------Acattcatc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7330137 59 - 7796314 acagagcgagactccatctcagaaagagagaaTCTACCAAGGAGAGGCCG---------Acattcatc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73803407 64 + 74750902 acagagcaggactctatctcaaaaagagagaaTCTACCA---AGAGTCCA-GAGGTCTGAcattcatt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17254089 65 - 17725628 acagagcaggactctatcgcaaaa--agaagaTCTACCAAGGAGAGTCCA-GAGGTCTGAGGttcatt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6342042 67 + 6778120 acagagcgggactctgtctcaaaaagagagaaTCTACCGAGAAGAGTCCA-GAGGTCTGAcattcatt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 17147 66 - 21398 acagagcgagactctatctcaaaG-TAGAGAATCTACCAAGAAGAGTCCA-GAGGTCTGAcattcatt i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e mm10.chr16 32764389 2 + 98207768 I e micMur3.chr1 88361290 1594 + 114275543 I e dasNov3.JH569502 2674276 1142 - 6579706 I e canFam3.chr33 2297905 187 - 31377067 I e otoGar3.GL873829 181640 0 + 608964 C a score=497141.000000 s hg38.chr3_KI270934v1_alt 28805 45 + 163458 gtcatcatttactgggcacctgccgtgtgctggacaccgtgctaa s panTro5.chr3 2491127 45 - 202621043 gtcatcatttactgggcacctgccgtgtgctggacaccgtgctaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89140 45 - 190779 gtcatcatttactgggcacctgccgtgtgctggacaccgtgctaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 11668 45 + 55620 GTTGTcatttactgggcacctgccgtgtgctggacaccgtgctaa i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799466 43 - 123690457 gtcatcaattattgggcacctgccgtgtgctggacac--tgctaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2313426 45 - 204787373 atcatcatttactgggcacctgctgtgtgctggacactgtgctaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192378755 45 - 192460366 atcatcatttactgggcacctgctgtgtgctggacactgtgctaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19118289 45 - 19675229 atcatcatttactgggcacctgctgtgtgctggacactgtgctaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16351075 45 - 16847902 atcatcatttactgggcacctgctgtgtgctggacactgtgctaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91324540 45 + 91754291 atcatcatttactgggcacctgctgtgtgctggacactgtgctaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1375086 45 + 1977891 atcatcatttactgggcgcctgctgtgtgctggacactgtgctaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7330196 45 - 7796314 atcatcatttactgggcacctgctgcatgctggacagtgtgctaa i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73803471 45 + 74750902 atcatcattgattgagcacctgccgtgtggtagacactatgctaa i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17254154 45 - 17725628 atcgtcatttactgagcacctgccgtgtggtagacactgtgctaa i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6342109 45 + 6778120 atcatcatttattgagcacctgccgtgtggtcgacactgtgctaa i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 17213 45 - 21398 atcatcatttattgagcacctgctgtgtggtagacactgtgctaa i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 181640 44 + 608964 gttgtcattcactcagcacctgctgt-tgctgggcactgggctaa i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32764391 45 + 98207768 gtcaacatttattgagcatttactatctgccagatggtaggttaa i mm10.chr16 I 2 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e micMur3.chr1 88361290 1594 + 114275543 I e dasNov3.JH569502 2674276 1142 - 6579706 I e canFam3.chr33 2297905 187 - 31377067 I a score=2829127.000000 s hg38.chr3_KI270934v1_alt 28850 271 + 163458 cagccagaaa----------caaaggaaaaagaccaactgtgttttctctcaaagagctttcatgcgggtagaaagac--aagcgtcaagaggcaaacaatGGCGCCTTCTCCATGACTCA-------GTCC-------AGAGGCcccaatgggaaagaaataatagtttccaaaatgtg-ataggttgaaggacattttagcctt----agaaaccagccacgtgaactgtgaagtgtaaatccagttctatttgttctgtggcaACCACGTTTGGTCGTCAGAAGCAGACGCTAAGTCAA s panTro5.chr3 2491172 271 - 202621043 cagccagaaa----------caaaggaaaaagaccaactgtgttttctctcaaagagctttcatgcgggtagaaagac--aagcgtcaagaggcaaacaatGGCGCCTTCTCCATGACTCA-------GTCC-------AGAGGccccaatgggaaagaaataatagtttccaaaatgtg-ataggttgaaggacattttagcctt----agaaaccagccacgtgaactgtgaagtgtaaatccagttctatttgttctgtggcaACCACGTTTGGTCGTCAGAAGCAGACGCTAAGTCAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89185 271 - 190779 cagccagaaa----------caaaggaaaaagaccaactgtgttttctctcaaagagctttcatgcgggtagaaagac--aagcgtcaagaggcaaacaatGGCGCCTTCTCCATGACTCA-------GTCC-------ACAGGccccaatgggaaagaaataatagtttccaaaatgtg-ataggttgaaggacattttagcctt----agaaaccagccacgtgaactgtgaagtgtaaatccagttctatttgttctgtggcaACCACGTTTGGTCGTCAGAAGCAGACGCTAAGTCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 11713 271 + 55620 cagccagaaa----------caaaggaaaaagaccaaccgtgttttctctcaaagagctttcatgcgggtagaaagac--aagcgtcaagaggcaaACGATGGCGCCTTCTCCATGACTCA-------GTCC-------AGAGGCcccagtgggaaagaaataatagtttccaaaatgtg-ataggttgaaggacattttagcctt----agaaaccagccacgtgaactgtgaagtgtaaatccagttctatttgttctgtggcaACCACGTTTGGTCATCAGAAGCAGACGCTAAGTCAA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799509 277 - 123690457 tggccagaaacatttt----caaaggaaaaagaccaactgtgttttctctcaaagagctttcacgtgggtagaaagac--aagcgtcaagaggcaaatgaTGGTGCCTTCTCCATGACTCA-------GGCC-------AGAGGCcccaatgggaaagaaataatagtttccaaaatgtg-ataggacgaaggacattttagcctt----agaaaccagccacgtgaactgtgaagtgtaaatccagttctatttgttctgtggcaACCATGTTTGGTCATCAGAAGCAGACGCTAAGTCAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2313471 274 - 204787373 cagccagaaacatttt---aaaacggaaaaagatcaactatgtttactctcaaagagctttcatgtgggtagaaagac--aagtgtcaagaggcagacgatgatGCCTTCTCC--GACTCA-------GTCC-------AGAGGCcccagtgggaaagaaacaatagtttccaaaatgtg-ataggataaaggacagtttagcctt----agaacccagccatgtgaattgtgaagtataaatccagttctatttgttctgtggcaACCACTTTTGGTAA--AGAAACAGACGCTAAGTCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192378800 274 - 192460366 cagccagaaacatttt---aaaaaggaaaaagatcaactatgtttactctcaaagagctttcatgtgggtagaaagac--aagtgtcaagaggcagacgatgaCGCCTTCTCC--GACTCA-------GTCC-------AGAGGCcccagtgggaaagaaacaatagtttccaaaatgtg-ataggataaaggacagtttagcctt----agaacccagccatgtgaattgtgaagtataaatccagttctatttgttctgtggcaACCACTTTTGGTAA--AGAAACAGACGCTAAGTCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19118334 274 - 19675229 cagccagaaacatttt---aaaacggaaaaagatcaactatgtttactctcaaagagctttcatgtgggtagaaagac--aagtgtcaagaggcagacaatgaCGCCTTCTCC--GACTCA-------GTCC-------AGAGGCcccagtgggaaagaaacaatagtttccaaaatgtg-ataggataaaggacagtttagcctt----agaacccagccatgtgaattgtgaagtataaatccagttctatttgttctgtggcaACCACTTTTGGTAA--AGAAACAGACGCTAAGTCAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16351120 274 - 16847902 cagccagaaacatttt---aaaacggaaaaagatcaactatgtttactctcaaagagctttcatgtgggtagaaagac--aagtgtcaagaggcaGACGATGGCACCTTCTCC--GACTCA-------GTCC-------AGAGGCCCCAATGGGAAAGAAACAATAGTTTCCAAAATGTG-ATAGGATAAAGGACAGTTTAGCCTT----AGAAACCAGCCACGTGAATTGTGATGTATAAATCCAGTTCTGTTTGTTCTGTGGCAACCACTTTTGGTAA--AGAAACAGACGCTAAGTCAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91324585 274 + 91754291 cagccagaaacatttt---aaaatggaaaaagatcaactatgtttactctcaaagagctttcatgtgggtagaaagac--aagtgtcaagaggcaGACGATGGCGCCTTCTCC--GACTCA-------GTCC-------AGAGGCcccaatgggaaagaaacaatagtttccaaaatgtg-ataggataaaggacagtttagcctt----agaacccagccacgtgaattgtgaagtataaatccagttctatttgttctgtggcaACCACTTTTGGTAA--AGAAACAGACGCTAAGTCAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1375131 274 + 1977891 cagccagaaacatttt---aaaacagaaaaagatcaactatgtttactctcaaagagctttcatgtgggtagaaagac--aagtgtcaagaggcagacgatGGCACCTTCTCC--GACTCA-------GTCC-------AGAGGccccaatgggaaagaaacaatagtttccaaaatgtg-ataggataaaggacagttcagcctt----agaaaccagccacgtgaattgtgaagtataaatccagttctgtttgttctgtggcaACCACTTTTGGTAA--AGAAGCAGACGCTAAGTCAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7330241 274 - 7796314 cagccagaaacatttt---aaaaaggaaaaagatcaactatgtttgctctcaaagagctttcatgtgggtagaaagac--aagtGTCAAGAGGGAGACGACGGCGCCTTCTCC--GACTCA-------GTCC-------AGAGGCcccaatgggaaagaaacaattgtttccaaaatgtg-ataggataaaggacagtttaacctt----agaaaccagccacgtgaattgtgaagtgtaaatccagttctatttgttctatggcaACCACTTTTGGTAA--AGAAGCAGACGCTAAGTCAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73803516 266 + 74750902 cagccagaaacatttt---taaaaggaaaaagaccaactatgtttgctctcaaagagctttcatgcaggtaaaa---------------ggggcaaacGATGGCACCTGCTCCATGACTC--TGTCACGTCC-------AGCGGCCGCAATGGGAAAGAAAT--CAGTTTCCAAAATGTG-ATAGGACAAAGGACATTTTCACCCT-----GGCAGCAGCCCCGTGAGTTGCGAAGTGTAAATCCACTTCTATTTGTTCTCTGGCAACCACGTCTGGTAATCAGAAACAGGTGCTAAATC-A i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17254199 281 - 17725628 cagccagaaacatttt---taaaaggaaaaagaccaactatgtctgctctcaaagagctttcatgcaggtaaaaagac--aggtgtcaggaggcaaAGGATGGCGCCTTCTCCATGACTCAGTGTCACGTCC-------AGAGGCCACAATGGGAAAGAAAT--CAGTTTTCAAAATGGG-ATAGGACAAAGGACATTTTAGCCCT----AGGAACCAGCCACGTGAATGGTGACGTGTAAATCCAGTTCTATTTGTTCCGTGGCAACCAC-TTTGGTAATCAGAAACAGACACTAAGTC-A i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6342154 280 + 6778120 cagccagaaacatttt---taaaaggaaaaagaccaactatg-ctgctctcaaagagctttcatgcaggtaaaaagac--aggtgtcaagaggcaaACGATGGCGCCTTCTCCATGACTCAGTGTCACGTCC-------AGAGGCCGCAGTGGGAAAGAAAT--CGGTTTCCAAAATGGG-ATGGGACAAAGGACATTTTAGCCCT----AGGAACCAGCCACATGAATTGTGAGGTGTAAATCCAGTTCTATTTA-TCTGTGGCAACCACGTTTGGTAATCAGAAACAGACGCTAAGTC-A i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 17258 282 - 21398 cagccagaaacatttt---taaaaggaaaaagaacaattgtgtttgctctcaaagagctttcacgcaggtaaaaagac--agGTGTCAAGAGGCCAATGACGGCGCCTTCTCCATGACTCAGTGCCACGTCC-------AGAGGCTGCAATgggaaagaaat--cagtttccaaaatgtg-ataggacaaagtacattttagccct----aggaaccagccacgtgaattgtgcagtgtaaatccagttctatttgttctgtgccaACCACGTTTGGTAATCAGAAACAGACACTAAGTC-A i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 181684 272 + 608964 cagccaggggagtgag---ttaaaggaaaaaagccaacaatgtttgctctaaaggag-tttcactca-gtaaaaagaCTTTAGTATCAGGAGTCA----------TTCTGTCCATGACTCAACTTCATGTCC-------CGGGGCCTGAAAAGGAAAGAAA---TTATTTGCAAACTATG-ACAGGACAAAGGACATTTTGCCATT----AGAGATCAATCATGTAAATTGTGAAGTGTAAAGCTAGTTCTATTAGCTCTGCGGCAAAAACTTTTGGTAATCAGGAACTTAAGTGAAGTCAA i otoGar3.GL873829 C 0 I 1048 s mm10.chr16 32764436 290 + 98207768 ctgacagaaaaatggaGAGAAAGAGGATGAAGGCCAGCTATGTTGGCTCTCAACAAGCATTCACTATGGTGGAGACCC--TAGTGTCCAGAGGCAAACTGTGGGGCTTCCTCTGAGACTCA-------GTCTAATATAGAGAGGTTCCAACAGGAAAGAAATGTCAGCTTCCAAAATGTG-ATGGAGAAAAGGGCATGCTAGCCTTCGGAAGAGGTCAGTCAGGCAGATG--CAAGTGTGAGTCCAGGTCTAGTTGATCTGGGACAAAGAAGTTTGGCAATCAGGCACGTAAGTTGGGTCAG i mm10.chr16 C 0 I 779 s canFam3.chr33 2298092 260 - 31377067 --aaaagaaaa--------ACAAAAGGAGCAGACTGCCTACGTTTGCTCTCAAATAGCTGTTAGGAATGCCGGTGCTT--CAGTATCAGGAGGCC----------CCATGGACGTGACTCAATCTATTGTCC-------GGAAGCCCCAAGAGGAAAGAAATTACAGTTCCCCAAATGTGCATAGAACGAAGGACGGTTTAGCGTT----Agacatcagccacgcagatggtgaaacataaac---gtgctatttgttctgcgacaaacacttctg------cgaaacagcagctaagtcaa i canFam3.chr33 I 187 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e micMur3.chr1 88361290 1594 + 114275543 I e dasNov3.JH569502 2674276 1142 - 6579706 I a score=13073.000000 s hg38.chr3_KI270934v1_alt 29121 1 + 163458 G s panTro5.chr3 2491443 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89456 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 11984 1 + 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799786 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2313745 1 - 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192379074 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19118608 1 - 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16351394 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91324859 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1375405 1 + 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7330515 1 - 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73803782 1 + 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17254480 1 - 17725628 G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6342434 1 + 6778120 G i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 17540 1 - 21398 G i aotNan1.NW_018492867v1 C 0 C 0 s mm10.chr16 32765505 1 + 98207768 G i mm10.chr16 I 779 C 0 s canFam3.chr33 2298352 1 - 31377067 a i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e micMur3.chr1 88361290 1594 + 114275543 I e dasNov3.JH569502 2674276 1142 - 6579706 I e otoGar3.GL873829 181956 1048 + 608964 I a score=18080.000000 s hg38.chr3_KI270934v1_alt 29122 4 + 163458 CGAG s panTro5.chr3 2491444 4 - 202621043 CGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89457 4 - 190779 CGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 11985 4 + 55620 CAAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799787 4 - 123690457 CGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2313746 4 - 204787373 TAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192379075 4 - 192460366 CAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19118609 4 - 19675229 CAAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16351395 4 - 16847902 CAAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91324860 4 + 91754291 CAAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1375406 4 + 1977891 CAAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7330516 4 - 7796314 CAAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73803783 4 + 74750902 TGAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17254481 4 - 17725628 TGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6342435 4 + 6778120 TGGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 17541 4 - 21398 TGAT i aotNan1.NW_018492867v1 C 0 C 0 s mm10.chr16 32765506 4 + 98207768 CAAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2298353 4 - 31377067 tcat i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2675418 4 - 6579706 CAAA i dasNov3.JH569502 I 1142 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e micMur3.chr1 88361290 1594 + 114275543 I e otoGar3.GL873829 181956 1048 + 608964 I a score=50464.000000 s hg38.chr3_KI270934v1_alt 29126 3 + 163458 GGG s panTro5.chr3 2491448 3 - 202621043 GGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89461 3 - 190779 GGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 11989 3 + 55620 GGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799791 3 - 123690457 GGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2313750 3 - 204787373 GGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192379079 3 - 192460366 GGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19118613 3 - 19675229 GGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16351399 3 - 16847902 GGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91324864 3 + 91754291 GGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1375410 3 + 1977891 GGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7330520 3 - 7796314 GGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73803787 3 + 74750902 GGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17254485 3 - 17725628 GGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6342439 3 + 6778120 GGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 17545 3 - 21398 GGG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 183004 3 + 608964 GGG i otoGar3.GL873829 I 1048 C 0 s mm10.chr16 32765510 2 + 98207768 -GT i mm10.chr16 C 0 C 0 s canFam3.chr33 2298357 3 - 31377067 ggg i canFam3.chr33 C 0 I 864 s dasNov3.JH569502 2675422 3 - 6579706 GGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e micMur3.chr1 88361290 1594 + 114275543 I a score=364642.000000 s hg38.chr3_KI270934v1_alt 29129 34 + 163458 CTTTGGGGGAGGAATTGTTGCCCATCTGACTTGG s panTro5.chr3 2491451 34 - 202621043 CTTTGGGGGAGGAATTGTTGCCCATCTGACTTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89464 34 - 190779 CTTTGGGGGAGGAATTGTTGCCCATCTGACTTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 11992 34 + 55620 CTTTGGGGGAGGAATTGTTGCCCATCTGACTTGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799794 34 - 123690457 CTTTGGGGGAGGAATTATTGCCCATCTGACTTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2313753 34 - 204787373 CTTTGGGGGAGGAATCCTTGCCCACCTGACGTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192379082 34 - 192460366 CTTTGGGGGAGGAATCCTTGCCCACCTGACGTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19118616 34 - 19675229 CTTTGGGGGAGGAATCCTTGCCCACCTGACGTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16351402 34 - 16847902 CTTTGGGGGTGGAATCCTTGCCCACCTGACGTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91324867 34 + 91754291 CTTCGGGGGAGGAATCCTTGCCCACCTGACGTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1375413 34 + 1977891 CTTTGGGGGTGGAATCCTTGCCCACCTGACGTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7330523 34 - 7796314 CTTTGGGGGAAGAATCCTTGCCCACCTGACTTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73803790 34 + 74750902 CACTGGGGGAGGAATCGTTGCCCGTCTGAATTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17254488 32 - 17725628 CGTT--GGGAGGAATCGTTGCCCATCTGAATTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6342442 33 + 6778120 CGTT-GGGGAGGAATCATTGCCCGTCTGAATTGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 17548 34 - 21398 CATTGGGGGAGGATTCGTTGCCCATCTGAATTGG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 183007 34 + 608964 CTTTTGAGGAGGAATCATTGTCAATCTGAATTGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32765512 34 + 98207768 GGTTTGGAGAGAAATCACTGCCATTCTGAAGTGG i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2675425 34 - 6579706 GCTTCTGAGAGGAGTCACTGCCAATCTGTATTGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e micMur3.chr1 88361290 1594 + 114275543 I e canFam3.chr33 2298360 864 - 31377067 I a score=16511.000000 s hg38.chr3_KI270934v1_alt 29163 1 + 163458 G s panTro5.chr3 2491485 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89498 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12026 1 + 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799828 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2313787 1 - 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192379116 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19118650 1 - 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16351436 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91324901 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1375447 1 + 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7330557 1 - 7796314 G i colAng1.NW_012118932v1 C 0 I 126 s calJac3.chr17 73803824 1 + 74750902 G i calJac3.chr17 C 0 I 18 s saiBol1.JH378146 17254520 1 - 17725628 G i saiBol1.JH378146 C 0 I 18 s cebCap1.NW_016107444v1 6342475 1 + 6778120 G i cebCap1.NW_016107444v1 C 0 I 18 s aotNan1.NW_018492867v1 17582 1 - 21398 G i aotNan1.NW_018492867v1 C 0 I 17 s otoGar3.GL873829 183041 1 + 608964 G i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32765546 1 + 98207768 A i mm10.chr16 C 0 I 20 s canFam3.chr33 2299224 1 - 31377067 G i canFam3.chr33 I 864 C 0 s dasNov3.JH569502 2675459 1 - 6579706 G i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e micMur3.chr1 88361290 1594 + 114275543 I a score=36528.000000 s hg38.chr3_KI270934v1_alt 29164 3 + 163458 TCC s panTro5.chr3 2491486 3 - 202621043 TCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89499 3 - 190779 TCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12027 3 + 55620 TCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799829 3 - 123690457 TCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2313788 3 - 204787373 CCC i rheMac8.chr2 C 0 I 34 s macFas5.chr2 192379117 3 - 192460366 CCC i macFas5.chr2 C 0 I 20 s macNem1.NW_012014355v1 19118651 3 - 19675229 CCC i macNem1.NW_012014355v1 C 0 I 19 s cerAty1.NW_012004056v1 16351437 3 - 16847902 CCC i cerAty1.NW_012004056v1 C 0 I 34 s chlSab2.chr15 91324902 3 + 91754291 CCC i chlSab2.chr15 C 0 I 34 s manLeu1.NW_012102020v1 1375448 3 + 1977891 CCC i manLeu1.NW_012102020v1 C 0 I 34 s calJac3.chr17 73803843 3 + 74750902 TCC i calJac3.chr17 I 18 C 0 s saiBol1.JH378146 17254539 3 - 17725628 TCC i saiBol1.JH378146 I 18 C 0 s cebCap1.NW_016107444v1 6342494 3 + 6778120 TCC i cebCap1.NW_016107444v1 I 18 C 0 s aotNan1.NW_018492867v1 17600 3 - 21398 TCC i aotNan1.NW_018492867v1 I 17 C 0 s otoGar3.GL873829 183042 3 + 608964 TCC i otoGar3.GL873829 C 0 I 17 s mm10.chr16 32765567 3 + 98207768 TCC i mm10.chr16 I 20 C 0 s canFam3.chr33 2299225 3 - 31377067 TCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2675460 3 - 6579706 TCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e micMur3.chr1 88361290 1594 + 114275543 I e colAng1.NW_012118932v1 7330558 126 - 7796314 I a score=169609.000000 s hg38.chr3_KI270934v1_alt 29167 47 + 163458 ---------------------AAAGAGGTGAGAAGTGGCAGGAGGGGGTGCATTTGTGAGTTTTGGTT s panTro5.chr3 2491489 47 - 202621043 ---------------------AAAGAGGTGAGAAGTGGCAGGAGGGGGTGCATTTGTGAGTTTTGGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89502 47 - 190779 ---------------------AAAGAGGTGAGAAGTGGCAGGAGGGGGTGCATTTGTGAGTTTTGGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12030 47 + 55620 ---------------------AAAGAGGTGAGAAGTGGCATGAGGGGGTGCATTTGTGAGTTTTGGTT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799832 47 - 123690457 ---------------------AAAGAGGTGAGAAGCGGCATAAGGGGGTGCATTTGTGAGTTTTGGTT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73803846 45 + 74750902 ---------------------AAAGAGGTGAGAAGTGGCAC--GGGGGTGCATTTGTGAGTTTTCGTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17254542 46 - 17725628 ---------------------AAAGAGGTGAGAAGTGGCACA-GGGGGTGCATTCGTGAGTTTTGGTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6342497 45 + 6778120 ---------------------AACGAGGTGAGAAGTGGCAC--GGGGGTGCATTCGTGAGTTTTGGTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 17603 46 - 21398 ---------------------AAAGAGGTGAGAAGTGGCACG-GGGGGTGCATTTGTGAGTTTGGGTT i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 183062 39 + 608964 ---------------------AGAGAGGGAGGGAATGGTATGGGGGGCCGCATTTATGAC-------- i otoGar3.GL873829 I 17 C 0 s mm10.chr16 32765570 45 + 98207768 ---------------------AGAGAGGCAGGACATGG-ATG-GAGGATGCAGCCAGGAGTTTGCGTT i mm10.chr16 C 0 C 0 s canFam3.chr33 2299228 44 - 31377067 ---------------------CGAGAGGC-AGAGGCGGTAGCAGAAGGTGCATCTGTGAG--TCGGTC i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 2675463 66 - 6579706 AACCAGCCCTGGAAACCGTCCAGAGAGGAGAGTGG-GGCACC-GGGGTTGCACTTCTGAGTTTGGGTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e micMur3.chr1 88361290 1594 + 114275543 I e macNem1.NW_012014355v1 19118654 19 - 19675229 I e colAng1.NW_012118932v1 7330558 126 - 7796314 I e manLeu1.NW_012102020v1 1375451 34 + 1977891 I e chlSab2.chr15 91324905 34 + 91754291 I e cerAty1.NW_012004056v1 16351440 34 - 16847902 I e macFas5.chr2 192379120 20 - 192460366 I e rheMac8.chr2 2313791 34 - 204787373 I a score=68581.000000 s hg38.chr3_KI270934v1_alt 29214 18 + 163458 GACCCTAAAGCTGAGACA s panTro5.chr3 2491536 18 - 202621043 GACCCTAAAGCTGAGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89549 18 - 190779 GACCCTAAAGCTGAGACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12077 18 + 55620 GACCCTAAAGCTGAGACA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799879 18 - 123690457 GACCCTAAAGCTAGGACA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192379140 7 - 192460366 GACCCCA----------- i macFas5.chr2 I 20 C 0 s calJac3.chr17 73803891 18 + 74750902 GACCCTAAAGCTAAGACA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17254588 18 - 17725628 GACCCTAAAGCTAAGACA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6342542 18 + 6778120 GACCCTAAAGCTAAGACA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 17649 18 - 21398 GACCCTAAAGCTAAGACA i aotNan1.NW_018492867v1 C 0 C 0 s mm10.chr16 32765615 18 + 98207768 GAGTCTGAAGCTGGAACT i mm10.chr16 C 0 C 0 s canFam3.chr33 2299275 12 - 31377067 GTCGCTAATGCA------ i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 2675529 18 - 6579706 GTCCCTAAAGCTAAAACC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e micMur3.chr1 88361290 1594 + 114275543 I e macNem1.NW_012014355v1 19118654 19 - 19675229 I e otoGar3.GL873829 183101 0 + 608964 C e colAng1.NW_012118932v1 7330558 126 - 7796314 I e manLeu1.NW_012102020v1 1375451 34 + 1977891 I e chlSab2.chr15 91324905 34 + 91754291 I e cerAty1.NW_012004056v1 16351440 34 - 16847902 I e rheMac8.chr2 2313791 34 - 204787373 I a score=39107.000000 s hg38.chr3_KI270934v1_alt 29232 7 + 163458 GGGCCTG s panTro5.chr3 2491554 7 - 202621043 GGGCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89567 7 - 190779 GGGCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12095 7 + 55620 GGGCCTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799897 7 - 123690457 GGGCCTG i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19118673 7 - 19675229 GGACCCC i macNem1.NW_012014355v1 I 19 C 0 s calJac3.chr17 73803909 7 + 74750902 GGGCCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17254606 7 - 17725628 GGGCCTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6342560 7 + 6778120 GGGCCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 17667 7 - 21398 GGGCCTG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 183101 4 + 608964 ---CCTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32765633 7 + 98207768 GAGCTTG i mm10.chr16 C 0 C 0 s canFam3.chr33 2299287 7 - 31377067 GAGCGTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2675547 7 - 6579706 GAGTCTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e micMur3.chr1 88361290 1594 + 114275543 I e colAng1.NW_012118932v1 7330558 126 - 7796314 I e manLeu1.NW_012102020v1 1375451 34 + 1977891 I e chlSab2.chr15 91324905 34 + 91754291 I e cerAty1.NW_012004056v1 16351440 34 - 16847902 I e macFas5.chr2 192379147 0 - 192460366 C e rheMac8.chr2 2313791 34 - 204787373 I a score=56055.000000 s hg38.chr3_KI270934v1_alt 29239 8 + 163458 CAGCCCCA s panTro5.chr3 2491561 8 - 202621043 CAGCCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89574 8 - 190779 CAGCCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12102 8 + 55620 CAGCCCCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799904 8 - 123690457 CAGCCCCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192379147 6 - 192460366 --GGCCCA i macFas5.chr2 C 0 I 1 s macNem1.NW_012014355v1 19118680 7 - 19675229 -AGGCCTA i macNem1.NW_012014355v1 C 0 I 1 s colAng1.NW_012118932v1 7330684 8 - 7796314 CAGCCCCA i colAng1.NW_012118932v1 I 126 I 1 s calJac3.chr17 73803916 8 + 74750902 CAGCCCCA i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 17254613 8 - 17725628 CAGCCCCA i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 6342567 8 + 6778120 CAGCCCCA i cebCap1.NW_016107444v1 C 0 I 1 s aotNan1.NW_018492867v1 17674 8 - 21398 CAGCCCCA i aotNan1.NW_018492867v1 C 0 I 1 s otoGar3.GL873829 183105 8 + 608964 TGGCCCAA i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32765640 8 + 98207768 CAGCCTGT i mm10.chr16 C 0 C 0 s canFam3.chr33 2299294 8 - 31377067 CGGCCCTG i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 2675554 8 - 6579706 TGGCCTCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e micMur3.chr1 88361290 1594 + 114275543 I e manLeu1.NW_012102020v1 1375451 34 + 1977891 I e chlSab2.chr15 91324905 34 + 91754291 I e cerAty1.NW_012004056v1 16351440 34 - 16847902 I e rheMac8.chr2 2313791 34 - 204787373 I a score=206297.000000 s hg38.chr3_KI270934v1_alt 29247 27 + 163458 -GCCCT-GGATAAGC--CCTTTCCCC---CCC-AT s panTro5.chr3 2491569 27 - 202621043 -GCCCT-GGATAAGC--CCTTTCCCC---CCC-AT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89582 27 - 190779 -GCCCT-GGATAAGC--CCTTTCCCC---GCC-AT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12110 28 + 55620 -GCCCT-GGATAAGC--CCTCTCCCC---TCCAAT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799912 29 - 123690457 -GCCCT-GGATAAGC--CCTTCCCCCCT-CCC-AT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2313825 30 - 204787373 -GCCCT-GGATAAGC--CCTTTCTCTCTCCCC-AT i rheMac8.chr2 I 34 C 0 s macFas5.chr2 192379154 30 - 192460366 -GCCCT-GGATAAGC--CCTTTCTCTCTCCCC-AT i macFas5.chr2 I 1 C 0 s macNem1.NW_012014355v1 19118688 30 - 19675229 -GCCCT-GGATAAGC--CCTTTCTCTCTCCCC-AT i macNem1.NW_012014355v1 I 1 C 0 s cerAty1.NW_012004056v1 16351474 30 - 16847902 -GCCCT-GGATAAGC--CCTTTCTCTCTCCCC-AT i cerAty1.NW_012004056v1 I 34 C 0 s chlSab2.chr15 91324939 30 + 91754291 -GCCCT-GGATAAGC--CCTTTCTCTCTTCCC-AT i chlSab2.chr15 I 34 C 0 s manLeu1.NW_012102020v1 1375485 30 + 1977891 -GCCCC-AGATAAGC--CCTTTCTCTCTCCCC-AT i manLeu1.NW_012102020v1 I 34 C 0 s colAng1.NW_012118932v1 7330693 30 - 7796314 -GCCCT-GGATAAGC--CCTTTCTCTCTCCCC-AT i colAng1.NW_012118932v1 I 1 C 0 s calJac3.chr17 73803925 31 + 74750902 -GCCCTGGGATAAGC--CCTTTTTTCCTCCCC-AT i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17254622 31 - 17725628 -GCCCTGGGATAAGC--CCTTTTTTCCTCCCC-AT i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 6342576 31 + 6778120 -GCCCTGGGAGAAAC--CCTTTTTTCCTCCCC-AT i cebCap1.NW_016107444v1 I 1 C 0 s aotNan1.NW_018492867v1 17683 31 - 21398 -GCCCTGGGATAAGC--CCTTTTTTCCTCCCC-AT i aotNan1.NW_018492867v1 I 1 C 0 s otoGar3.GL873829 183114 25 + 608964 -GTCCTGGGATAACT--CCTTCCCCTAT------- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32765648 28 + 98207768 -GTTCTGACATAAGC--ACTGCTTTCCTTGT---- i mm10.chr16 C 0 C 0 s canFam3.chr33 2299304 29 - 31377067 -GCCCT-GGAGCAGCATCCCTCCCTCCTCTG---- i canFam3.chr33 I 2 I 2 s dasNov3.JH569502 2675562 28 - 6579706 GGCCCTCTGATAACC--CTTTCTTCTCTCA----- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I e micMur3.chr1 88361290 1594 + 114275543 I a score=28229.000000 s hg38.chr3_KI270934v1_alt 29274 9 + 163458 CCCC-GACCT s panTro5.chr3 2491596 9 - 202621043 CCCC-GACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89609 9 - 190779 CCCC-GACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12138 9 + 55620 CCCC-GACCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799941 9 - 123690457 CCCC-GACCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2313855 10 - 204787373 CTCCTGACCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192379184 10 - 192460366 CTCCTGACCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19118718 10 - 19675229 CTCCTGACCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16351504 10 - 16847902 CTCCTGACCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91324969 10 + 91754291 CTCCTGACCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1375515 10 + 1977891 CTCCTGACCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7330723 10 - 7796314 CTCCGCACCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73803956 10 + 74750902 CCCCCAACCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17254653 10 - 17725628 CCCCCAACCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6342607 10 + 6778120 CCCCCAACCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 17714 9 - 21398 CCCCCGA-CC i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88362884 8 + 114275543 --CCCCGCCC i micMur3.chr1 I 1594 I 1 s otoGar3.GL873829 183139 3 + 608964 -------CCT i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32765676 4 + 98207768 -TCCT----- i mm10.chr16 C 0 C 0 s canFam3.chr33 2299335 4 - 31377067 CCGC------ i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 2675590 6 - 6579706 ----CTACCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14771717 1561 - 22200726 I a score=4177773.000000 s hg38.chr3_KI270934v1_alt 29283 229 + 163458 CAGGCCTCCAAGGGCTGCAGTTCTACAGGCTACACCGGGAAGAAAGGCCCAACTACCGTCTCGAGTGCCTGCAGTGGCTGAAGAGCCAGCCTCGGTGGCCCAGCTGGGGCTGGAAC------CAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGACGGGACTTACGATTCCAACCCGTCAGCATAGGT--GACACCTCCTTCCCGC---------------------CCCCCACAAGCCCACCCACCACCCTCTC s panTro5.chr3 2491605 228 - 202621043 CAGGCCTCCAAGGGCTGCAGTTCTACAGGCTACACCGGGAAGAAAGGCCCAACTACCGTCTCGAGTGCCTGCAGTGGCTGAAGAGCCAGCCTCGGTGGCCCAGCTGGGGCTGGAAC------CAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGACGGGACTTACGATTCCAACCCGTCAGCATAGGT--GACACCTCCTTCCCGC---------------------CCCCCACAAGCCCACCCACCA-CCTCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89618 228 - 190779 CAGGCCTCCAAGGGCTGCAGTTCTACAGGCTACACCGGGAAGAAAGGCCCAACTACCGTCTCGAGTGCCTGCAGTGGCTGAAGAGCCAGCCTCGGTGGCCCAGCTGGGGCTGGAAC------CAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGACGGGACTTACGATTCCAACCCGTCAGCATAGGT--GACACCTCCTTCCCGC---------------------CCCCCACAAGCCCACCCACCA-CCTCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12147 229 + 55620 CAGGCCTCCGAGGGCTGCAGTTCTACAGGCTACACCGGGAAGAAAGGCCCAACTACCGTCTCGAGTGCCTGCAGTGGCTGAAGAGCCAGCCTCGGTGGCCCAGCTGGGGCTGGAAC------CAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGACGGGACTTACGATTCCAACCCGTCAGCATAGGT--GACACCTCCTTCCCGC---------------------CCCCCACAAGCCCACCCACCACCCTCTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2799950 229 - 123690457 CAGGCCTCCGAGGGCTGCAGTTCTACAGGCTACACCTGGAAGAAAGGCCCAACTACTGTCTTGAGTGCCTGCAGTGGCTGAAGAGCCAGCCTCGGTGGCCCAGCTGGGGCTGGAAC------CAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGATGGGACTTACGATTCCAACCCGTCAGCATAGGT--GACACCTCCTTCCCGC---------------------CCCCCACAAGCCCACCCACCACCCTCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2313865 229 - 204787373 CAGGCCTCCGAGGGCTGCAGTTCTACAGGCTACACCGGGAAGAAAGGCCTAACTACCGTCTCGAGTGCCTGCAGTGGCTGAAGAGCCAGCCTCAGTGGCCCAGCTGGGGCTGGAAC------CAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGATGGGACTTACGATTCCAACCCGTCAGCATAGGT--GACACCACCTTCCCGC---------------------CCCCCACAAGCTCACCCACCACCCTCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192379194 229 - 192460366 CAGGCCTCCGAGGGCTGCAGTTCTACAGGCTACACCGGGAAGAAAGGCCTAACTACCGTCTCGAGTGCCTGCAGTGGCTGAAGAGCCAGCCTCAGTGGCCCAGCTGGGGCTGGAAC------CAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGATGGGACTTACGATTCCAACCCGTCAGCATAGGT--GACACCACCTTCCCGC---------------------CCCCCACAAGCTCACCCACCACCCTCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19118728 229 - 19675229 CAGGCCTCCGAGGGCTGCAGTTCTACAGGCTACACCGGGAAGAAAGGCCTAACTACCGTCTCGAGTGCCTGCAGTGGCTGAAGAGCCAGCCTCAGAGGCCCAGCTGGGGCTGGAAC------CAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGATGGGACTTACGATTCCAACCCGTCAGCATAGGT--GACACCACCTTCCCGC---------------------CCCCCACAAGCTCACCCACCACCCTCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16351514 229 - 16847902 CAGGCCTCCGAGGGCTGCAGTTCTACAGGCTACACCGGGAAGAAAGGCCTAACTATCGTCTCGAGTGCCTGCAGTGGCTGAAGAGCCAGCCTCAGTGGCCCAGCTGGGGCTGGAAC------CAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGATGGGACTTACGATTCCAACCCGTCAGCATAGGT--GACACCACCTTCCCGC---------------------CCCCCACAAGCTCACCCACCACCCTCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91324979 219 + 91754291 CAGGCCTCCGAGGGCTGCAGTTCTACAGGCTACACCGGGAAGAAAGGCCTAACTACCGTCTCGAGTGCCTGCAGTggttgaagagccagcctcagtggcccagctggggctggaac------caggtctcctgCCCTTGTTCCTGGCAGCAGGGACGATGGGACTTACGATTCCAACCTGTCAGCATAGGT--GACACCACCTTCCCGC---------------------CCCCCACAAGCTCACCCA---------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1375525 229 + 1977891 CAGGCCTCCGAGGGCTGCAGTTCTACAGGCTACACCGGGAAGAAAGGCCTAACTACCGTCTCGAGTGCCTGCAGTGGCTGAAGAGCCAGCCTCAGTGGCCCAGCTGGGGCTGGAAC------CAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGATGGGACTTACGATTCCAACCCGTCAGCATAGGT--GACACCACCTTCCCGC---------------------CCCCCACAAGCTCACCCACCACCCTCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7330733 229 - 7796314 CAGGCCTCCGAGGGCTGCAGTTCTACAGGCTACACCGAGAAGAAAGGCCCAACTACCGTCTCAAGTGCCTGCAGTGGCTGAAGAGCCAGCCTCGGTGGCCCAGCCGGGGCTGGAAC------CAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGATGGGACTTACGATTTCAACCTGTCAGCATAGGT--GACACCTCCTTCGCGT---------------------CCCCCACAAGCTCACTCACCGCCCTCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73803966 229 + 74750902 CAGGCCTCCGAGGGCTGCAGTTCTACAGGCTACACAGGGAAGAAAGGCCCAACTACCGTCTCATGTGCCTGCAGTGGCTGAGGAGCCAGCCTCAGTGGCCCAGCTGGGGTTGGAAC------CAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGATGGGACTTACGATTCCGACCCGTCAGCATAGGT--GACACTTCCTTCCTGT---------------------CCCCCACAAGCCCACCCACCATCCTCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17254663 229 - 17725628 CAGGCCTCCGAGGGCTGCAGTTCTACAGGCTACACAGGGAAGAAAGGCCCAACTACCGTCTCATGTGCCTGCAATGGTTGCGGAGCCAGCCTCAGCGGCCCAGCTGGGGCTGGAAC------CAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGATGGGACTTACGATTCCGACCCGTCAGCATAGGT--GACACCTTCTTCCCGT---------------------CCCCCACAAGCCCACCCACCATCCTCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6342617 229 + 6778120 CAGGCCTCCGAGGGCTGCAGTTCTACAGGCTGCACAGGGAAGAGAGGCCCAACTACCGCCTCGTGTGCCTGCAGTGGTTGAGGAGCCAGCCTCAGCGGCCCAGCTGGGGCTGGAAC------CAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGATGGGACTTACGATTCCGACCTGTCAGCTTAGGT--GACGCCTCCTTCCCGT---------------------CCCCCACAAGCCCACCCACCATCCTCTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 17723 227 - 21398 CAGGCCTCCGAGGGCTGCAGTTCTACAGGCTACACAGGGAAGAAAGGCCCAACTACCGTCTCATGTGCCTGCAGTGGTTGAGGAGCCAGCCTCAGCAGCCCAGCTGGGGCTGGAAC------CAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGATGGGACTTACGATTCCGACGCGTCAGCATAGGT--GACACCTCCTTCCCGT----------------------CCCCGCAAG-CCACCCCACATCCTCTC i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88362893 229 + 114275543 CAGGCCTCCGGGGGCTGCAAATCTACCGGCTACACAGGGAGCAAAGGCCCAACTACCGTCTCATGTGCCTGCAGTGGTTGAAGAGCTCACCTCAGCGGCCCAGGTGGGGCAGGAAC------CAGATCTCCTGCCCTTGCTCCTGGCAGCAGGGACTTTGGGACTTACGATTCCAGCCCATCAGCATAGGT--GACACCTCCTTCCTGT---------------------CCCCCACAAGCCCACCCACCATCCTCTC i micMur3.chr1 I 1 I 29 s proCoq1.NW_012133858v1 14773278 229 - 22200726 CAGGCCTCCAGGGGCTGCAGGTCTACAGGCTACACAGGGAGGAAAGGCCCAACTACCGTCTCAAGTGCCTGCAGTGGTTGAAGAGCTCACCTCAGTGGCCCAGGAGGGGCAGGAAC------CAGATCTCCTGCCCTTGCTCCTGGCAGCAGGGACTATGGGACTTACGATTCCAGCCCGTCAGCATAGGT--GACACCTCCTTCCTGT---------------------CCCCCACAAGCCCTCCCACCATCCTCTC i proCoq1.NW_012133858v1 I 1561 C 0 s otoGar3.GL873829 183143 229 + 608964 CAGGCCTCCGGGGGCTGCAGGTCTACAAGCTACACAGGGAGGAAAGGCCCAACTACCGCCTCAAGTGCCTGCAGTGGTTGAAGAGCCCACCTCAGTGGCCCACATGGGGCAGAAGC------CAGATCTTCTGCCCTTGCTCCTGGCAGCAGGGACGATGGGACTTGCGATTCCAGCCCAGCAGCATAGGT--GACGCATCCTCCCCGT---------------------CCCCCACAAGCCTCCTCACCATCCTCTC i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32765680 229 + 98207768 CAGGCATCCGGGGACTGCAGGTCTACAGGCTGCACAGGGAGGAGCGGCCCAACTACCGGCTCAAATGTCTGCAGTGGCTGGAGAGTCAGCCTCAGCAGCCCAGCTGGGGCTGGAGC------TCAGTTTCCTGCCCTTGCTCCTGGCAGCAGGGACAACGGGACTTTCGGTTCAGGCCCATCAACCCAGGT--GATACTTCCTTCCTGC---------------------CCTTGACAAGCCCACCGGCCATCACCTC i mm10.chr16 C 0 C 0 s canFam3.chr33 2299339 250 - 31377067 TAGGCCTCCGGGGCCTGCAGCTCTACAGCCTGCACCAGGAAGAAAGGCCCAACTACCGTCTCAGGTGCCTGCAGTGGTTGAAGACACAGCCTCAGTGGCCCACGTGGGGCTGGAAC------CAGGTCTCCTGCCCTTGCTCCTGGCAGCAGGGACTGTGGGACTTGCGGTTCCAGCCTAGCAGCATAGGTAAGAGAGCTCCTCCCTGCCTCTTGGGGCATGCCCACCG-CCCCCGTAAGCCCACCCACCAACCCTC- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2675596 255 - 6579706 CAGGCTTCCGGGGGCTGCAGGTCTATACTCTACATAGAGAAGAAAGGCCCAACTACCGTCTCAAGTGCCTGCAGTGGTTGGAGAGGCAGCCTCAGTGGACCGGCTGGGGCTGGGACTGGAGGCAGATCTCCTGCCCTTGCTCCTGGCAGCAGGGACGATGGGACTTGAGATTCCAGCCCATCAGTATAGGT--GACACCTTATTCCTTTGTCTTGGGGTATCTCTACTACTCCCCAAAAGCCCATGCA-CATCCCCTC i dasNov3.JH569502 C 0 C 0 a score=81982.000000 s hg38.chr3_KI270934v1_alt 29512 6 + 163458 TGCTCA s panTro5.chr3 2491833 6 - 202621043 TGCTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89846 6 - 190779 TGCTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12376 6 + 55620 TGCTCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2800179 6 - 123690457 TGCTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314094 6 - 204787373 TGCTCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192379423 6 - 192460366 TGCTCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19118957 6 - 19675229 TGCTCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16351743 6 - 16847902 TGCTCG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1375754 6 + 1977891 TGCTCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7330962 6 - 7796314 TGCTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73804195 6 + 74750902 TGCTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17254892 6 - 17725628 TGCTCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6342846 6 + 6778120 TGCTCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 17950 6 - 21398 TGCTCA i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 14773507 6 - 22200726 TGCTCA i proCoq1.NW_012133858v1 C 0 I 23 s otoGar3.GL873829 183372 6 + 608964 TGCTCA i otoGar3.GL873829 C 0 I 18 s mm10.chr16 32765909 6 + 98207768 TGCTCA i mm10.chr16 C 0 I 9 s canFam3.chr33 2299589 6 - 31377067 CGGTCA i canFam3.chr33 C 0 I 23 s dasNov3.JH569502 2675851 6 - 6579706 TGATAA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88363122 29 + 114275543 I e chlSab2.chr15 91325198 0 + 91754291 C a score=906144.000000 s hg38.chr3_KI270934v1_alt 29518 76 + 163458 CGCC-----------------------CTC--------------AG-----------------------CCTCTCCCC------AGAAA-----CAG-CCCC-------------------------------------------------TG-CTTGTTCCC-------ACCCCGC-CCCTGGCA-GCCCCAG---CCTGGGCCTGAGT s panTro5.chr3 2491839 76 - 202621043 CGCC-----------------------CTC--------------AG-----------------------CCTCTCCCC------AGAAA-----CAG-CCCC-------------------------------------------------TG-CTTGTTCCC-------ACCCCGC-CCCTGGCA-GCCCCAG---CCTGGGCCTGAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89852 76 - 190779 CGCC-----------------------CTC--------------AG-----------------------CCTCTCCCC------AGAAA-----CAG-CCCC-------------------------------------------------TG-CTTGTTCCC-------ACCCCGC-CCCTGGCA-GCCCCAG---CCTGGGCCTGAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12382 76 + 55620 CGCC-----------------------CTC--------------AG-----------------------CCTCTCCCC------AGAAA-----CAG-CCCC-------------------------------------------------TG-CTTGTTCCC-------AGCCCGC-CCCTGGCA-GCCCTGG---CCTGGGCCTGAGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2800185 76 - 123690457 TGCC-----------------------CTC--------------AG-----------------------CCTCTCCCC------AGAAA-----CAG-CCCC-------------------------------------------------TG-CTTGTTCCC-------GCCCCGC-TCCTGGCA-GCCCCGG---CCTGGGCCTGAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314100 99 - 204787373 CGCC-----------------------CTC--------------AGCCTCCCGCCCTCTCTGCTCGCGCCCTCTTCCC------AGAAA-----CAG-CCCC-------------------------------------------------TG-CTTGTTCCC-------GCCCCGC-CCCTGGCA-TCCCCGG---CCTGGGCCTGAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192379429 99 - 192460366 CGCC-----------------------CTC--------------AGCCTCCCGCCCTCTCTGCTCGCGCCCTCTTCCC------AGAAA-----CAG-CCCC-------------------------------------------------TG-CTTGTTCCC-------GCCCCGC-CCCTGGCA-TCCCCGG---CCTGGGCCTGAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19118963 99 - 19675229 CGCC-----------------------CTC--------------AGCCTCCCGCCCTCTCTGCTCGCGCCCTCTTCCC------AGAAA-----CAG-CCCC-------------------------------------------------TG-CTTGTTCCC-------GCCCTGC-CCCTGGCA-TCCCCGG---CCTGGGCCTGAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16351749 99 - 16847902 CGCC-----------------------CTC--------------AGCCTCCCGCCCTCTCTGCTCGCGCCCTCTTCCC------AGAAA-----CAG-CCCC-------------------------------------------------TG-CTTGTTCCC-------GCCCTGC-CCCTGGCA-TCCCCGG---CCTGGGCCTGAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91325198 86 + 91754291 --------------------------------------------------CCGCCCTCTCTGCTCGCGCCCTCTTCCC------AGAAA-----CAG-CCCC-------------------------------------------------TG-CTTGTTCCC-------GCCCTGC-CCCTGGCA-TCCCCGG---CCTGGGCCTGAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1375760 99 + 1977891 CGCC-----------------------CTC--------------AGCCTCCCGCCCTCTCTGCTCGCGCCCTCTTCCC------AGAAA-----CAG-CCCC-------------------------------------------------TG-CTTGTTCCC-------GCCCCGC-CCCTGGCA-GCCCCAG---CCTGGGCCTGAGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7330968 76 - 7796314 CGCC-----------------------CTC--------------AG-----------------------CCTCTCCCC------AGAAA-----CAG-CCCC-------------------------------------------------TG-CTTGTTCCC-------ACCCCGC-CCCTGGCA-GCCCCGG---CCTGAGCCTGAGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73804201 77 + 74750902 TGCC-----------------------CTC--------------AG-----------------------CCTCTTCCC------AGAAA-----CAACCCCC-------------------------------------------------TG-CTTGTTCCC-------GGCCCAC-CCCTGGCA-GCCCCAG---CCTGGGCCTGAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17254898 77 - 17725628 TGCC-----------------------CTC--------------AG-----------------------CCTCTCCCC------AGAAA-----CAGCCCCC-------------------------------------------------TG-CCTGTTCCC-------GGCCCAC-CCCCGGCA-GCCCCGG---CCTGGGGCTGAGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6342852 77 + 6778120 CGCC-----------------------CTC--------------AG-----------------------CCTCTCCCC------AGAAA-----CAACCCCC-------------------------------------------------CG-CTTGTTCCC-------AGCCCAC-CCCCGGCA-GCCGCGG---CCTGGGCCTGAGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 17956 77 - 21398 CACC-----------------------CTC--------------AG-----------------------CCTCTCCCC------AGAAA-----CAACCCCC-------------------------------------------------TG-CTTGTTCCC-------GGCCCAG-CCCCGGCA-GCCCCAG---CCTCGACCTGAGC i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88363151 77 + 114275543 CGCC-----------------------CTC--------------AG-----------------------CCCCTCCCC------AGAAT-----CAC-CCCC-------------------------------------------------TGCCCTGCTCCC-------ACCCTCA-CCCAGGCA-CCACCAG---CCTGGGCCTGAGT i micMur3.chr1 I 29 I 39 s proCoq1.NW_012133858v1 14773536 79 - 22200726 TGCC-----------------------CTC--------------AG-----------------------CCCCTCCCC------AGAAT-----CAC-CCCC-------------------------------------------------TGCCCTGTTCCC-------ACCCTCACCCCAGGCACCCCCCAG---CCTGGGCCTGAGT i proCoq1.NW_012133858v1 I 23 C 0 s otoGar3.GL873829 183396 67 + 608964 TGCT-----------------------CTC--------------AG-----------------------CCCCTCCCC------AGAAT-----CGT-CCCC-------------------------------------------------TGCCCTGTTCCC-------ACCCTCG------------CCCAG---TCTGGACCTGAGT i otoGar3.GL873829 I 18 C 0 s mm10.chr16 32765924 142 + 98207768 TGCC-----------------------CTCTCCCAGACACGCTGAG-----------------------CCCCTCCCCCCACAGAGAGA-----CAG-CACcacacacacacacacacacacacacacacacacacacacacacacaaacaca-GCCCCTCCC-------GCCTCAC-CTGTCACA-AGCT------CCTGGACCTGAGG i mm10.chr16 I 9 C 0 s canFam3.chr33 2299618 74 - 31377067 CACC-----------------------CTC--------------GG-----------------------CCCCTCCCCC-----AGGGT-----CCC-CCCC-------------------------------------------------AG-CC---TCCC-------GTCCCTC-CCCCG----CTCCCGGGCCTCTGGGCCTGAGC i canFam3.chr33 I 23 C 0 s dasNov3.JH569502 2675857 111 - 6579706 TGCCTGACCTGTCCTTTCTAAGGGTGTCTC--------------AG-----------------------CTTCTTCCC------AGGAATCCCCCAT-ACCC-------------------------------------------------TG-CTTGTTCCCTGTTCCTACCCCAC-CAGAGGCA-TCCCCAG---TCTGGGCCTGAGT i dasNov3.JH569502 C 0 C 0 a score=498111.000000 s hg38.chr3_KI270934v1_alt 29594 41 + 163458 GGGACTGGACTTGTTTCAGGTCGCTGGGGCCTCGGCAGTAG s panTro5.chr3 2491915 41 - 202621043 GGGACTGGACTTGTTTCAGGTCGCTGGGGCCTCGGCAGCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89928 41 - 190779 GGGACTGGACTTGTTTCAGGTCGCTGGGGCCTCGGCAGCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12458 41 + 55620 GGGACTGGACTTGTTTCAGGTCGCTGGGGCCTCGGCAGCAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2800261 41 - 123690457 GGGACTGGGCTTGTTTCAGGACGCCGGAGCCTCGGCAGCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314199 41 - 204787373 GGGACTGGACTTGTTTCAGGTCTCTTGGGCCTCGGCAGCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192379528 41 - 192460366 GGGACTGGACTTGTTTCAGGTCTCTTGGGCCTCGGCAGCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119062 41 - 19675229 GGGACTGGACTTGTTTCAGGTCTCTTGGGCCTCGGCAGCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16351848 41 - 16847902 GGGACTGCACTTGTTTCAGGTCTCTTGGGCCTAGGCAGCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91325284 41 + 91754291 GGGACTGGACTTGTTTCAGGTCTCTTGGGCCTCGGCAGCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1375859 41 + 1977891 GGGACTGGACTTGTTTCAGGTCTCTTGGGCCTCGGCAGCAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331044 41 - 7796314 GGGACTGGACTTGTTTCAGGTCTCTGGGGCCTCGGCAGCAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73804278 41 + 74750902 ACGACTGGACTTGTTTCAGGTCGGTGGGCCCCCGGCAGCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17254975 41 - 17725628 GCGGCTGGACTTGTTTCAGGTCGGTGGGCCCCCGGCAGCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6342929 41 + 6778120 GCAGGTGGACTTGTTTCAGGTCGGGGGGCCCCCGGCAGCAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 18033 41 - 21398 GCGACTGGACTGGTTTCAGGTCGGCGGGCCCCCGGCAGCAG i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 14773615 41 - 22200726 ATGTCTACACGTGTTGCAGACAGGTGGGACTGGAGCGGCAG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 183463 41 + 608964 ATGTCTGGGTGTTTTGCAGGCTGGTGGGGCTGGAGTAGCAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32766066 32 + 98207768 ATGTCTGGTCTCTTTGCAGGTTGGTGGG---------ACAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2299692 41 - 31377067 GTGTCTGTACCCGTTGCAGGCTGGTGGGGCCTCGGCAGCAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2675968 41 - 6579706 GTTTCTGGACTTGTTGCAGGCTGGTGGGGCCTCAGCAGTAG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88363228 39 + 114275543 I a score=1537734.000000 s hg38.chr3_KI270934v1_alt 29635 79 + 163458 GCAGCTGTGCAGCTTCACCTCTTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCCTGGGGAGAGTTTCGTGAAGGCTGG s panTro5.chr3 2491956 79 - 202621043 GCAGCTGTGCAGCTTCACCTCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCCTGGGGAGAGTTTCGTGAAGGCTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89969 79 - 190779 GCAGCTGTGCAGCTTCACCTCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCCTGGGGAGAGTTTCGTGAAGGCTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12499 79 + 55620 GCAGCTGTGCAGCTTCACCTCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCCTGGGGAGAGTTTCGTGAAGGCTGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2800302 79 - 123690457 GCAGCTGTGCAGCTTCACATCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCCTGGGGAGAGTTTCGTGAAGGCTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314240 79 - 204787373 GCAGCTCTGCAGCTTCACGTCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCGTGGGGAGAGTTTCGTGAAGGCTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192379569 79 - 192460366 GCAGCTCTGCAGCTTCACGTCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCGTGGGGAGAGTTTCGTGAAGGCTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119103 79 - 19675229 GCAGCTCTGCAGCTTCACGTCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCGTGGGGAGAGTTTCGTGAAGGCTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16351889 79 - 16847902 GCAGCTCTGCAGCTTCACGTCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCGTGGGGAGAGTTTCGTGAAGGCTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91325325 79 + 91754291 GCAGCTCTGCAGCTTCACGTCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCGTGGGGAGAGTTTCGTGAAGGCTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1375900 79 + 1977891 GCAGCTCTGCAGCTTCACGTCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCGTGGGGAGAGTTTCGTGAAGGCTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331085 79 - 7796314 GCAGCTGTGCAGCTTCACCTCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCCTGGGGAGAGTTTCGTGAAGGCTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73804319 79 + 74750902 GCAGCTCTGCAGCTTCACCTCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCCTGGGGAGAGCTTCGTGAAGGCTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255016 79 - 17725628 GCAGCTCTGCAGCTTCACCTCCTGGCGAGGGGGCGTGTGCTGTAGCTACGGGCCCTGGGGAGAGCTTCTTGAAGGCTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6342970 79 + 6778120 GCAGCTCTGCGGCTTCACCTCCTGGCGAGGAGGCGTGTGCTGCAGCTATGGGCCCTGGGGAGAGCTTCGTGAAGGCTGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 18074 79 - 21398 GCAGCTCTGCAGCTTCACCTCCTGGAGAGGAGGCGCGTGCTGCAGCTACGGGCCCTGGGGAGAGCTTCGTGACGGCTGG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88363267 79 + 114275543 GCAGCTGTGCCGCTTCTCCTCCTGGCAGGGAGGCGTGTGCTGCAGCTACGGGCTCTGGGGAGAGCTTCGAGAAGGCTGG i micMur3.chr1 I 39 C 0 s proCoq1.NW_012133858v1 14773656 79 - 22200726 GCAGCTGTGCCGCTTCTCCTCCTGGCAGGGAGGCGTGTGCTGCAGCTACGGGCCCTGGGGAGAGCTTCGTGAAGGCTGG i proCoq1.NW_012133858v1 C 0 I 84 s otoGar3.GL873829 183504 79 + 608964 ACAGCTGTGCAGCTTCTCCTCCTGGCGGGGAGGCGTGTGCTGCAGCTACGGGCGTTGGGGAGAGTTTCGTGAAGGCTGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32766098 79 + 98207768 GCAGCTGTGCAGCTTCTCCTCCGGGCGAGGGGGTGTGTGCTGCAGCTATGGTGCCTGGGGAGAGTTTCGAGAAGGCTGG i mm10.chr16 C 0 C 0 s canFam3.chr33 2299733 79 - 31377067 GCAGCTGTGCAGCTTCTCCTCCTGGCGCGGGGGCGTGTGCTGCAGCTACGGGCCCTGGGGCGAGCTTCTCCAAGGCTGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2676009 79 - 6579706 GCAGCTGTGCAGCTTCTCCTCCTGGCAAGGGAACGTGTGCTGCAGCTATGGGCCCTGGGGAGAGCTTCGTGAAGGCTGG i dasNov3.JH569502 C 0 C 0 a score=437798.000000 s hg38.chr3_KI270934v1_alt 29714 32 + 163458 CACGTGCAGCGTCCTTGGCAGTTGGGTGCGTG s panTro5.chr3 2492035 32 - 202621043 CACGTGCAGCGTCCTTGGCAGTTGGGTGCGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90048 32 - 190779 CACGTGCAGCGTCCTTGGCAGTTGGGTGCGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12578 32 + 55620 CATGTGCAGCGTCCTTGGCAGTTGGGTGCGTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2800381 32 - 123690457 CACGTGCAGCGTCCTTGGCAGTTGGGTGCGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314319 32 - 204787373 CACGTGCAGCGTCCCTGGCAGTTCGGTGCGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192379648 32 - 192460366 CACGTGCAGCGTCCCTGGCAGTTCGGTGCGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119182 32 - 19675229 CACATGCAGCGTCCCTGGCAGTTCGGTGCGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16351968 32 - 16847902 CACGTGCAGCGTCCCTGGCAGTTCGGTGCGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91325404 32 + 91754291 CATGTGCAGCATCCCTGGCAGTTCGGTGCGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1375979 32 + 1977891 CACGTGCAGCGTCCCTGGCAGTTCGGTGCGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331164 32 - 7796314 CACGTGCAGCGTCCCTGGCAGTTCGGTGCGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73804398 31 + 74750902 CACGTGCAGAGTCCTCGGCAGTTTGGTG-GTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255095 31 - 17725628 CATGTGCAGAGTCCTCAGCAGTTCGGTG-GTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343049 31 + 6778120 CACGTGCAGAGTCCTCGGCAGTTCGGTG-GTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 18153 31 - 21398 CACGTGCAGAGTCCTCAGCAGTTCGGTG-GTG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88363346 32 + 114275543 AGAGTGCAGAGCCCTTGGCAGTTTGGTACGTG i micMur3.chr1 C 0 I 350 s otoGar3.GL873829 183583 32 + 608964 AGAATGCAGAGTCCCTGGCAGTTTGGTATGTG i otoGar3.GL873829 C 0 I 6 s mm10.chr16 32766177 32 + 98207768 AGAATGCACAGTCCTTGGCAGTTTGGTAAGTA i mm10.chr16 C 0 C 0 s canFam3.chr33 2299812 32 - 31377067 AGGGTGCACGATCCTTGGCAGTTTGGTACGTG i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 2676088 32 - 6579706 AGAGTGCAGAGTATTTGGCAGTTTGGTACGTA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14773735 84 - 22200726 I a score=336710.000000 s hg38.chr3_KI270934v1_alt 29746 37 + 163458 AGTCCGT---GATCTCAA-CCCCA---C--------CTTCCC---------------------------------------------GGCCAAGTAG-------------------------- s panTro5.chr3 2492067 37 - 202621043 AGTCCGT---GATCTCAA-TCCCA---C--------CTTCCC---------------------------------------------AGCCAAGTAG-------------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90080 37 - 190779 AGTCCGT---GATCTCAA-TCCCA---C--------CTTCCC---------------------------------------------AGCCAAGTAG-------------------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12610 37 + 55620 AGTCCGT---GATCTCAA-CCCCA---C--------CTTCCC---------------------------------------------AGCCAAGTGG-------------------------- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2800413 40 - 123690457 AGTGCGTGGAGATCTCAA-CCCCA---C--------CTTCCC---------------------------------------------AGCCAAGCAG-------------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314351 40 - 204787373 AGTCCATGGAGATCTCAA-CCCCA---C--------CTTCCC---------------------------------------------AGCCAAGCAG-------------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192379680 40 - 192460366 AGTCCATGGAGATCTCAA-CCCCA---C--------CTTCCC---------------------------------------------AGCCAAGCAG-------------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119214 40 - 19675229 AGTCCATGGAGATCTCAA-CCCCA---C--------CTTCCC---------------------------------------------AGCCAAGCAG-------------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352000 40 - 16847902 AGTCCATGGAGATCTCAA-CCCCA---C--------CTTCCC---------------------------------------------AGCCAAGCAG-------------------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91325436 40 + 91754291 AGTCCATGGAGATCTCAA-CCCCA---C--------CTTCCC---------------------------------------------AGCCAAGCAG-------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376011 40 + 1977891 AGTCCATGGAGATCTCAA-CCCCA---C--------CTTCCC---------------------------------------------AGCCAAGCAG-------------------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331196 39 - 7796314 AGTCCGTGGAGATCTCAA--CCCA---C--------CTTCCC---------------------------------------------AGCCAAGCAG-------------------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73804429 33 + 74750902 AGTC-------CTCTCAG-CCCCA---C--------CTTCCC---------------------------------------------AGCCAAGCAG-------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255126 39 - 17725628 AGTCCACACAGCTCTCAA-CCCCA---C--------CTTCCC---------------------------------------------AGCCAAGCA--------------------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343080 40 + 6778120 AGTCCATGCAGCTCTGAA-CCCCA---C--------CTTCCC---------------------------------------------AGCCAAGCAG-------------------------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 18184 38 - 21398 AGTCCATGCAGCTCTCAA-CCCCA---C--------CTT-CC---------------------------------------------AGCCAAGCA--------------------------- i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 183621 38 + 608964 CACCTGTGGAG-----AA-CCACAGGTT--------CTTCTT---------------------------------------------AGCCAAGCCA-------------------------- i otoGar3.GL873829 I 6 I 1 s mm10.chr16 32766209 48 + 98207768 TCTTCCTGGAGACCTTAA-CCCCG---CCCGCGGCTCTTCTC---------------------------------------------AGACAGGCTA-------------------------- i mm10.chr16 C 0 I 1 s canFam3.chr33 2299846 86 - 31377067 TGTTCACGGACATCTCACCCCCCA---C--------CTTCTCTGGAGTCTCTACCCTTCTCTGTCAGAGACCAGGCCTGGGCCTCCGAGCCAAGTAG-------------------------- i canFam3.chr33 I 2 I 1 s dasNov3.JH569502 2676120 66 - 6579706 TGTTCACAGAGACCTCAA-CCCTA---C--------TTTTGC---------------------------------------------AGTCAAAGACCAGCCCGGGGTTCCATGCTAAGCATT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14773735 84 - 22200726 I e micMur3.chr1 88363378 350 + 114275543 I a score=1551498.000000 s hg38.chr3_KI270934v1_alt 29783 118 + 163458 GGGACCCTC-AGCATGAAGCCTCTCGTCCTCATT-CCTTCCCagacccttcccctctctgggcctccacttcctgatcgggtaacgttaggaagcttccaacatccccaccagcggacat s panTro5.chr3 2492104 118 - 202621043 GGGACCCTC-AGCATGAAGCCTCTTGTCCTCATT-CCTTCCCagacccttcccctctctgggcctccacttcctgatcgggtaacgttaggaagcttccaacatccccaccagcggacat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90117 118 - 190779 GGGACCCTC-AGCATGAAGCCTCTTGTCCTCATT-CCTTCCCagacccttcccctctctgggcctccacttcctgatcgggtaacgttaggaagcttccaacatccccaccagcggacat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12647 118 + 55620 GGGACCCTC-AGCATGAAGCCTCTTGTCCTCATT-CCTTCCCAGACCCTTCCCCTCTCTGGGTCTCCACTTCCTGATCGGGTAACGTTAGGAAGCTTCCACCATCCCCACCAGCGGACAT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2800453 118 - 123690457 AGGACCCTC-AGCATGAAGCCTCTTGTCCTCATT-CCTTCCCagacccttcccctctctgggcctccacttcctgatctggtaacattaggaagcttccaacatccccaccagcagacat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314391 118 - 204787373 GGGACCCTC-AGCGTGAAGCCTCTTGTCCTCATT-CCTTCCCagacccttcccctctctgggcctccatttcctgatctggtaacattaggaagcttccaacatccccaccagcggacat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192379720 118 - 192460366 GGGACCCTC-AGCGTGAAGCCTCTTGTCCTCATT-CCTTCCCAGACCcttcccctctctgggcctccatttcctgatctggtaacattaggaagctTCCAACATCCCCACCAGCGGACAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119254 118 - 19675229 GGGACCCTC-AGCATGAAGCCTCTTGTCCTCATT-CCTTCCCagacccttcccctctctgggcctccatttcctgatctggtaacattaggaagcttccaacatccccaccagcggacat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352040 118 - 16847902 GGGACCTTC-AGCATGAAGCCTCTTGTCCTCATT-CCTTCCCagacccttcccctctctgggtctccatttcctgatctggtagcattaggaagcttccaacatccccaccagcggacat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91325476 118 + 91754291 GGGACCCCC-AGCATGAAGCCTCTTGTCCTCATT-CCTTCCCagacccttcccctctctgggcctccatttcctgatctggtaacattaggaagctTCCAACATCCCCACCAGCGGACAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376051 118 + 1977891 GGGACCCTC-AGCATGAAGCCTCTTGTCCTCATT-CCTTCCTAGACCcttcccctctctgggcctccatttcctgatctggtaacattaggaagctTCCAACATCCCCACCAGCAGACAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331235 118 - 7796314 GGGAACCTC-AGCATGCAGCCTCTTGTCCTCATT-CCTTCCCAGACCcttcccctctctgggcctccatttcctgatctggtaacattaggaagctTCCAACATCCCCACCAGCGGACAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73804462 117 + 74750902 GGGATCCTC-AGGATGAAGCCTCT-GTCCTCATTCCCTTCCCagacccttcccc-atctgggcctccatttcctgatcttgtaaagttaggaagcttccaacatcctcaccagctgacat i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255165 116 - 17725628 GGGACCCTC-AGGGTGAAGCCTCT-GTCCTCATT-CCTTCCCaggcccttcccc-atctgggcctccatttcctgatcttgtaaagtgaggaagattccaacatccccaccagctaacat i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343120 116 + 6778120 GGGACCCCC-AGGATGAAGCCTCT-GTCCTCATT-CCTTCACAGACCCTTCCCC-ATCGGGGCCTCCATTTCCTGATCTTGTAAAGTTAGGAAGCTTCCAACATCCCCACCAGCTGACAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 18222 114 - 21398 GGGA-CCTC-AGGATGAAGCCTCT-GTCCTCAAT-CCTTCCCAGACCCTT-CCC-ATCTGGGCCTCCATTTCCTGATCTTATAAAGTTAGGAAGCTTCCAGCATCCCCACCAGCTGAATA i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 14773819 115 - 22200726 GGGGCCCTC-AGAATGAAGCCTCTTGTCCCCACT-CCTTCCCAG-CTcctcccctctctgggcctcaatttcctgatcttgtg--gttaaacagcttccaacatccccaccagctgacat i proCoq1.NW_012133858v1 I 84 I 221 s otoGar3.GL873829 183660 103 + 608964 GGGACCCTC-AGAGTGAAGCTTC-TGTCCC--CT-CCTTCCCAG-CTCTTCCTCTCTCTGGGCTTTAATTTCTTGATCTTATA--ATTAGGAACCTTCCAACATCCCTTGC--------- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32766258 111 + 98207768 GGGACCTTC-CGGATGAAGCCTCTTGATCCCAAT-GCTTCCCAGATGCTTTCTCTCT---GGTCCCAGTCCCCTGATCTTGAAAAGTTCAGAACCTGCCATCTTCCTTGTAGTCTC---- i mm10.chr16 I 1 C 0 s canFam3.chr33 2299933 118 - 31377067 GGGATCTGA-AGAAAGAAGCCTTTCGCCCCCCTT-CCCTCCCAGCCCCTTACCCTCTCTGGCCACTGATTTCCTCATGTTGTAACACTGGGAAGCTTCCAGCAGCCCTTCCAGCTGCCAT i canFam3.chr33 I 1 I 1 s dasNov3.JH569502 2676186 104 - 6579706 GGGACCCTCAAGAATGAAGCTTCCTGTCCCCATT-CTTTCC--agtcctgtccttctctgggcctcagtttcccagtct-gtaaagttaggaagctTCCA------------GTTGACAT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88363378 350 + 114275543 I a score=299069.000000 s hg38.chr3_KI270934v1_alt 29901 31 + 163458 -tcggggatgtatgaGCTGAGAGCCTCTTTCC s panTro5.chr3 2492222 31 - 202621043 -tcggggatgtatgaGCTGAGAGCCTCTTTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90235 31 - 190779 -tcggggatgtatgaGCTGAGAGCCTCTTTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12765 31 + 55620 -TCGGGGATGTATGAGCTGAGTGCCTCTTTCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2800571 31 - 123690457 -tcggagatgtatgaGCTGAGTGCCTCTTTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314509 31 - 204787373 -tcGGGGATGTGTGAGCTGAGTGCCTCTTTGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192379838 31 - 192460366 -TCGGGGATGTGTGAGCTGAGTGCCTCTTTGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119372 31 - 19675229 -tcGGGGGTGTGTGAGCTGAGTGCCTCTTTGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352158 31 - 16847902 -tcGGGGATGTGTGAGCTGAGTGCCTCTTTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91325594 31 + 91754291 -TCGGGGATGTGTGAGCTGAGTGCCTCTTTGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376169 31 + 1977891 -TCGGGGATGTGTGAGCTGAGTGCCTCTTTGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331353 31 - 7796314 -TCGGGGATGTGTGAGCTGAGTGTCTCTTTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73804579 31 + 74750902 -tcGGGGATGAATGAGCTGAGTGCCTCTTTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255281 30 - 17725628 -tTGGGGATGAAGGAGCTGAGTGCCTC-TTCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343236 31 + 6778120 -TTGGGGATGAATAAGCTGAGTGCCTCTTTCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 18336 29 - 21398 -TCGGGGATG-ATGAGCTGAGTG-CTCTTTCC i aotNan1.NW_018492867v1 C 0 I 21 s otoGar3.GL873829 183763 18 + 608964 --------------AGCTGAGTGCCTCTTGTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32766369 25 + 98207768 -TCAGA----TTAGGACAGAATGTGTCTTC-- i mm10.chr16 C 0 C 0 s canFam3.chr33 2300052 30 - 31377067 -CTAGGGACTTATGA-TTGAGTGCCTCTTGCC i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2676290 32 - 6579706 TCTTGGAATTTATGACTATAGGTCCTTTTGCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14773934 221 - 22200726 I e micMur3.chr1 88363378 350 + 114275543 I a score=217560.000000 s hg38.chr3_KI270934v1_alt 29932 24 + 163458 TCATCTCTATACCTGGCTCCACAT s panTro5.chr3 2492253 24 - 202621043 CCATCTCTCTACCTGGCTCCACAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90266 24 - 190779 CCATCTCTCTACCTGGCTCCACAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12796 24 + 55620 CCATCTCTATACCTGGCTCCACAT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2800602 24 - 123690457 CCATCTCTATACCTGGCTCCGCAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314540 24 - 204787373 CCATCTCCGTACCTGGCTCCGCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192379869 24 - 192460366 CCATCTCCGTACCTGGCTCCGCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119403 24 - 19675229 CCATCTCCGTACCTGGCTCCGCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352189 24 - 16847902 CCATCTCCGTACCTGGCTCCGCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91325625 24 + 91754291 CCATCTCCGTACCTGGCTCCACAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376200 24 + 1977891 CCATCTCCGTACCTGGCTCCGCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331384 24 - 7796314 CCATCTCTGTACCTGGCTCCGCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73804610 22 + 74750902 CCATCTCC--ACCTGGCCCCGTAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255311 22 - 17725628 CCATCTCC--ACCTGGCCCTGTAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343267 22 + 6778120 CCACCTGC--ACCTGGCCCCGTAG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 183781 22 + 608964 CCATCTCC--ACGTGGCCCTGTAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32766394 21 + 98207768 -TATCTTC--ATTTGGCCTTGTGC i mm10.chr16 C 0 C 0 s canFam3.chr33 2300082 22 - 31377067 CCATCTTC--ACTTGGCCACAGGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2676322 22 - 6579706 CCATCTCC--ACTTGGCCGCATAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14773934 221 - 22200726 I e aotNan1.NW_018492867v1 18365 21 - 21398 I e micMur3.chr1 88363378 350 + 114275543 I a score=1920934.000000 s hg38.chr3_KI270934v1_alt 29956 163 + 163458 CCCCAGGCCAGAGTGGG-GCCATTTCTCCAGGCAAGAAGAGAGCGCCTAGGCTG-ACCCCGTCCCTGTAGACCCAGATGAGCAGGATGTTT--GGGGGAAGACTGAGAGTCAGCTC-CCACAGAGACGCTCCAAGGGAGCTG-GAGAGCGCAGGGGTGT-------GGGGTCAC-GT--- s panTro5.chr3 2492277 163 - 202621043 CCCCAGGCCAGAGTGGG-GCCGTTTCTCCAGGCAAGAAGAGAGCGCCTAGGCTG-ACCCCGTCTCTGTAGACCCAGATGAGCAGGATGTTT--GGGGGAAGACTGAGAGTCAGCTC-CCACAGAGACGCTCCAAGGGAGCTG-GAGAGCGCAGGGGTGT-------GGGGTCAC-GT--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90290 163 - 190779 CCCCAGGCCAGAGTGGG-GCCGTTTCTCCAGGCAAGAAGAGAGCGCCTAGGCTG-ACCCCGTCTCTGTAGACCCAGATGAGCAGGATGTTT--GGGGGAAGACTGAGAGTCAGCTC-CCACAGAGACGCTCCAAGGGAGCTG-GAGAGCGCAGGGGTGT-------GGGGTCAC-GT--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12820 163 + 55620 CCCCAGGCCAGAGTGGG-GCCATTTCTCCAGGCAAGAAGAGAGCGCCTAGGCTG-ACCCCGTCCCTGTAGACCCAGATGAGCAGGATGTTT--GGGGGAAGACTGAGAGTCAGCTC-CCACAGAGACGCTCCAAGGGAGCTG-GAGAGCGCAGGGGTGT-------GGGGTCAC-GT--- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2800626 163 - 123690457 CCCCAGGCCAGACTGGG-GCCATCTCTCCAGGCAGGAGGAGAGCGCTTAGGCTG-ACCCCGTCCCTGTAGACCCAGATGAGCAGGATGTTT--GGGGGAAGACTGAGAGTCAGCTC-CCACAGAGACCCTCCAAGGGAGCTG-GAGAGCGCAGGGGTGT-------GGGGTCAC-GT--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314564 162 - 204787373 CCCTAGGCCAGAGTGGG-GCCATCTCTCCAGGCAAGAAGAGAGCACCTAGGCTG-ACCCTGTCCCTGTAGACCCGGATGAGCAGGATGTTT--GGGGGAAGACTGAGAATCAGCTC-CCGCAGAGACCCTCCAAGGGAGCTG-CAGAGCACAGGGGCGT--------GGGTCAC-GT--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192379893 162 - 192460366 CCCTAGGCCAGAGTGGG-GCCATCTCTCCAGGCAAGAAGAGAGCACCTAGGCTG-ACCCTGTCCCTGTAGACCCGGATGAGCAGGATGTTT--GGGGGAAGACTGAGAATCAGCTC-CCGCAGAGACCCTCCAAGGGAGCTG-CAGAGCACAGGGGCGT--------GGGTCAC-GT--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119427 162 - 19675229 CCCTAGGCCAGAGTGGG-GCCATCTCTCCAGGCAAGAAGAGAGCACCTAGGCTG-ACCCTGTCCCTGTAGACCCGGATGAGCAGGATGTTT--GGGGGAAGACTGAGAATCAGCTC-CCGCAGAGACCCTCCAAGGGAGCTG-CAGAGCACAGGGGCCT--------GGGTCAC-GT--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352213 162 - 16847902 CCCTAGGCCAGAGTGGG-GCCATCTCTCCAGGCAAGAAGAGAGCACCTAGGCTG-ACCCTGTCCCTGTAGACCCGGATGAGCAGGATGTTT--GGGGGAAGACTGAGAATCAGCTC-CCGCAGAGACCCTCCAAGGGAGCTG-CAGAGCACAGGGGTGT--------GGGTCAC-GT--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91325649 162 + 91754291 CCCTAGGCCAGAGTGGG-GCCATCTCTCCAGGCAAGAAGAGAGCGCCTAGGCTG-ACCCTGTCCCTGTAGACCCAGATGAGCAGGATGTTT--GGGGGAAGACTGAGAATCAGCTC-CCGCAGAGACCCTCCAAGGGAGCTG-CAGAGCACAGGGGTGT--------GGGTCAC-GT--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376224 162 + 1977891 CCCTAGGCCAGAGTGGG-GCCATCTCTCCAGGCAAGAAGAGAGCACCTAGGCTG-ACCCTGTCCCTGTAGGCCCGGATGAGCAGGATGTTT--GGGGGAAGACTGAGAATCAGCTC-CCGCAGAGACCCTCCAAGGGAGCTG-CAGAGAACAGGGGTGT--------GGGTCAC-GT--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331408 163 - 7796314 CCCTAGGCCAGAGTGGG-GCCATCTCTCCAGGCAAGAAGAGAGCGCCTAGGCTG-ACCCTGTCCCCGTAGACCCAGATGAGCAAGATGTTT--GGGGCGAGACTGAGAATCAGCTC-CCGCAGAGACCCTCCAAGGGAGCTG-GAGAGCACAGGGGTGT-------GGGGTCAC-GT--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73804632 164 + 74750902 CCCCAGGCCAGAGTGGA-GTCATCTTTCCAGGCAAGAAGAGAGCACATAGTCTG-ACCCTGTCCCTGTAGACCCAGATGAGCAGGCTGTTT--GGGGGAAGACTGAGAGTCAGCTC-CCATAGAGACCCTCCAACAGAGCTG-GAGAACACAGGGACGA-------GGGGTCACGGT--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255333 160 - 17725628 CCCCAGGCCAGAGTGGA-GGCAGCTTTCCAGGCAAGAAGAGAGCGCCTAGCCTG-ACCCCATCCCTGTCGACCCAGATGAGCAGGCTGTTT--GGGGGAAGACT--GAGTCAGCTC-CCGCAGAGACCCTCCAAC--AGCTG-GAGAACACAGGGACCG-------GGGGTCACGGT--- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343289 164 + 6778120 CCCTAGGCCAGAGTGGA-GGCATCTTTCCAGGCAAGAAGAGAGCGCCTAGTCTG-ACCCCGTCCCTGTAGACCCAGATGAGCAGGCTGTCT--GGGGGAAGACTGAGAGTCAGCTC-CCACAGAGACCCTCCAACAGAGCTG-GAGAACACAGGGGCGT-------GGGGTCACGGG--- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 18386 163 - 21398 GCCCAGGCCAGAGTGGA-GGCATCTTTCCAGGCAAGAAGAGAGCGCCTGGTCTG-ACCCCGTCCCTGTAGACCCAGATGAGCAGGCCGTTT--GAGGGTAGACTGAGAGTCAGCTC-CCACAGAGATCCTCCGACAGAGCTG-GAGGACACAGGGACAT--------GGGTCACGGT--- i aotNan1.NW_018492867v1 I 21 C 0 s otoGar3.GL873829 183803 149 + 608964 CCCCAGCCCAGTTCAGG-GACATCTTTGTAAGCTTGCGG-GAGAGCCTAATCTG-ACCTCATCCCTCAAGACCCAGGTTGGCAGGCTGTTT--GGGGAAAGACACAGAGTCAGCTC-CCACAGAGACCCTCCGAGGAGGTAGAGAGAGCTTGTGG------------------------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32766415 166 + 98207768 CCTCAGCCCAAAGTGGA-GA-ATCTTTCTAGGCCAAGGAAGAGGGCCTACTTTG-ATGTTATC-CTCTGGTCCCATGATAACAGGATGTTTTGGGGGAAAGACTTAGAATCACCTCACCATAAAGACCTTCCAAGGGAGCCA-GGGTACACAGAGGTAAATAGAAAAGGGT--------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2300104 160 - 31377067 CCCCAGACAAGAATGGG-GCCATGT-TCTGGGGAAGGAGGGGGC-CCCAGTCTG-ACCCTGTGCCTCAGGACCCAGATTACCTGGCTGTCT--CGGGGGAGACATGGAGTCATCTC-CCACAGAGACCTTCCAGAAGAGCCA-GAGagcacggggctgg--------gggccag-gg--- i canFam3.chr33 C 0 I 25 s dasNov3.JH569502 2676344 164 - 6579706 CTCCAGCCCAGAGTGGGAGGCATTCTTCCACAGAAGGGGAGGGGGCATGGTATATACCCCATCCCTCTAGACCCAGATTAGCAGGCTGTTT--GGGGGAAGACTTAGAGACAGTTC-CTCCAGG---CTTTCCAAGGAACTA-GAGAGCAAAGGTATGT--------GTGTGGT-GGCAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14773934 221 - 22200726 I e micMur3.chr1 88363378 350 + 114275543 I a score=65754.000000 s hg38.chr3_KI270934v1_alt 30119 5 + 163458 ---GGTCT s panTro5.chr3 2492440 5 - 202621043 ---GGTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90453 5 - 190779 ---GGTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12983 5 + 55620 ---GGTCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2800789 5 - 123690457 ---GGTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314726 5 - 204787373 ---GGTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380055 5 - 192460366 ---GGTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119589 5 - 19675229 ---GGTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352375 5 - 16847902 ---GGTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91325811 5 + 91754291 ---GGTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376386 5 + 1977891 ---GGTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331571 5 - 7796314 ---GGTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73804796 5 + 74750902 ---GGTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255493 5 - 17725628 ---GGTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343453 5 + 6778120 ---GGTCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 18549 5 - 21398 ---GGTCT i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88363728 5 + 114275543 ---GGTCT i micMur3.chr1 I 350 C 0 s mm10.chr16 32766581 5 + 98207768 ---GGCTT i mm10.chr16 C 0 C 0 s canFam3.chr33 2300289 5 - 31377067 ---gatct i canFam3.chr33 I 25 I 124 s dasNov3.JH569502 2676508 7 - 6579706 AGTAGTT- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14773934 221 - 22200726 I e otoGar3.GL873829 183952 0 + 608964 C a score=344585.000000 s hg38.chr3_KI270934v1_alt 30124 28 + 163458 GTGTCCTCCCGTTCTCTCCCCCGTCCCA s panTro5.chr3 2492445 28 - 202621043 GTGTCCTCCCGTTCTCTCCCCTGTCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90458 28 - 190779 GTGTCCTCCCGTTCTCTCCCCTGTCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 12988 28 + 55620 GTGTCCTCCCGTTCTCTCCCCTGTCCCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2800794 28 - 123690457 GTGTCCTCCCCTTCTCTCCCCTGTCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314731 28 - 204787373 GTGTCCTCCCGTTCTCTCCCCTGTCCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380060 28 - 192460366 GTGTCCTCCCGTTCTCTCCCCTGTCCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119594 28 - 19675229 GTGTCCTCCCGTTCTCTCCCCTGTCCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352380 28 - 16847902 GTGTCCTCCCGTTCTCTCCCCTGTCCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91325816 28 + 91754291 GTGTCCTCCCGTTCTCTCCCCTGTCCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376391 28 + 1977891 GTGTCCTCCCGTTCTCTCCCCTGTCCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331576 28 - 7796314 GTGTCCTCCCGTTCTCTCCCCTGTCCCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73804801 28 + 74750902 GTGTCCTCTCGTTCTCTCACCCGTCCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255498 28 - 17725628 GTGTCCTCTCGTTCTCTCCCCCGTCCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343458 28 + 6778120 GTGTCCTCTCGTTCTCTCCCCCGTCCCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 18554 28 - 21398 GTGTCCTCTCGCTCTCTCCCCCGTCCTA i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88363733 28 + 114275543 GTGTCCTCCCATCCTCCTCCCTGTACCG i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 183952 8 + 608964 --------------------CAGTACCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32766586 26 + 98207768 GCATCTGCCCACCCTGGGGACTGCTC-- i mm10.chr16 C 0 C 0 s canFam3.chr33 2300418 26 - 31377067 GGGTCCTCC--TTCCACCCCCTGCCACT i canFam3.chr33 I 124 I 19 s dasNov3.JH569502 2676515 28 - 6579706 GTGTCCTCCCACCCCCCTCCCTGTTCCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14773934 221 - 22200726 I a score=772809.000000 s hg38.chr3_KI270934v1_alt 30152 65 + 163458 TGGCAGTTTCCACAGTTCCCAGACCGTCAGCCGTGCCCTCCCCACTCCCAGCACGTTG-AGAGCAG s panTro5.chr3 2492473 65 - 202621043 TGGCAGTTTCCACAGTTCCCAGACCGTCAGCCGTGCCCTCCCCACTCCCAGCACATTG-AGAGCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90486 65 - 190779 TGGCAGTTTCCATAGTTCCCAGACCGTCAGCCGTGCCCTCCCCACTCCCAGCACATTG-AGAGCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13016 65 + 55620 TGGCAGTTTCCACAGTTCCCAGACCGTCAGCCGTGCCCTCCCCATTCCCATCACGTTG-AGAGCAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2800822 65 - 123690457 CGGCAGTTTCCACAGTTCCCAGACTGTCAGCCATGCCCTCCCCACTCCTAGCCCATTG-AGAGCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314759 65 - 204787373 TGGCAGTTTCCACAGTTCCCTGACTGTCAGCCGTGCCCTCCACACTCCCATTATGTTG-AGAGTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380088 65 - 192460366 TGGCAGTTTCCACAGTTCCCTGACTGTCAGCCGTGTCCTCCCCACTCCCATTATGTTG-AGAGTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119622 65 - 19675229 TGGCAGTTTCCACAGTTCCCTGACTGTCAGCCATGCCCTCCCCACTCCCATTATGTTG-AGAGTGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352408 65 - 16847902 TGGCAGTTTCCACAGTTCCCTGACTGTCAGCCATGCCCTCCCCACTCCCATTATGTTG-AGAGTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91325844 63 + 91754291 TGGCAGTTTC--CCGTTCCCTGACTGTCAGCCATGCCCTCCCCACTCCCAGCACGTTG-AGAGCGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376419 63 + 1977891 TGGCAGTTTC--CCGTTCCCTGACTGTCAGCCATGCCCTCCCCACTCCCATTATGTTG-AGAGTGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331604 65 - 7796314 TGGCAGTTTCCACAGTTCCCTGACTGTCAGCCATGCCCTCCCCACTCCCAGCACATTG-AGAGCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73804829 65 + 74750902 TGGCAGTTTCCACAGTTCCTGGACTGTCAGCCGCACCCTCCCCACTCCCAGCATGTTG-AGGGCGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255526 54 - 17725628 CGGCAGTTTCCACAGTTCCCGGACTGTCAGCCACACCCTCGCCACTCCCGGTAT------------ i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343486 60 + 6778120 TGGCAGTTTCCACAGT-----GACTGTCGGCCGCACCCTCCCCACTCCCAGCATGTTG-AGAGCGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 18582 65 - 21398 TGGCAGTTTCCACAGTTCCCGGACTGTCAGCCGCA-CCTCCCCACTCCCAGCACGTTGAAGAGCGG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88363761 65 + 114275543 TGGCAGTCTCTATTGTCCCCAGACCATCAGCCATGCCCTCCCCACTCCCAGCACTTGG-AGAGCAG i micMur3.chr1 C 0 I 179 s proCoq1.NW_012133858v1 14774155 65 - 22200726 TGGCAGTCTCCATTGTCCCCAGACCATCAGCCACGCCCTCCCCACTCCCAGCACTTGG-AGAGCAG i proCoq1.NW_012133858v1 I 221 C 0 s otoGar3.GL873829 183960 65 + 608964 TGGCAATCTCCATTGTCCCCAGATTACCAGCCCTGCCCTCCTCTCTCCCAGCACTCGG-ACAGCAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32766612 57 + 98207768 ---TAGTCTCTCGTATCTTCATGCCATCATCTCTGTTCTCCCTTCTGCTGGCTCTCTG-AG----- i mm10.chr16 C 0 C 0 s canFam3.chr33 2300463 63 - 31377067 CAGCAGCCTCCAGGGTCCCCAGACTGGCGGTCATACCCTCC-CGCTCCT-GCACTTTG-GGGGCAG i canFam3.chr33 I 19 C 0 s dasNov3.JH569502 2676543 54 - 6579706 TTGCGGCCCCCACAGTCCACAGACCA----------CTTACCCACAACCTTTCCCCTG-GGAGCA- i dasNov3.JH569502 C 0 C 0 a score=205015.000000 s hg38.chr3_KI270934v1_alt 30217 22 + 163458 CAGTACTTGGCTCTCCACCCTC- s panTro5.chr3 2492538 22 - 202621043 CAGTACTTGGCTCTCCACCCTC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90551 22 - 190779 CAGTACTTGGCTCTCCACCCTC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13081 22 + 55620 CAGTACTTGGCTCTCCACCCTC- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2800887 22 - 123690457 CAGTACTTGGCTCTCCACCCTC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314824 22 - 204787373 CAGTACTTGGCTGTCCACCCTC- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380153 22 - 192460366 CAGTACTTGGCTGTCCACCCTC- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119687 22 - 19675229 CAGTACTTGACTGTCCACCCTC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352473 22 - 16847902 CAGTACTTGGCTGTCCACCCTC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91325907 22 + 91754291 CAGTACTTGGCTGTCCACCCTC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376482 22 + 1977891 CAGTACTTGGCTGTCCACCCTC- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331669 22 - 7796314 CAGTACTTGGCTGTCCACCCTC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73804894 22 + 74750902 TGGTTCTTGGCTCTCCACCCTC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255580 19 - 17725628 ---TTCTTGGCTCTCCACCCTC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343546 22 + 6778120 TGTTTCTTGGCTCTGCACCCTC- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 18647 21 - 21398 TGGTTCTT-GCTCTCCACCGTC- i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 14774220 22 - 22200726 TGGGACTTGACACCCATTCTTC- i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 184025 22 + 608964 TGGGACTTGACACTCACCCTTC- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2300526 20 - 31377067 GGGGACCCACCG--CCACCCTT- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2676597 16 - 6579706 -----CTT--CACCCCACCCTTC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32766669 0 + 98207768 C e micMur3.chr1 88363826 179 + 114275543 I a score=372021.000000 s hg38.chr3_KI270934v1_alt 30239 30 + 163458 AAGACAGGAAATTTGCTTAGCTCCTACCAT s panTro5.chr3 2492560 30 - 202621043 AAGACAGGAAATTTGCTTAGCTCCTACCAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90573 30 - 190779 AAGACAGGAAATTTGCTTAGCTCCTACCAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13103 30 + 55620 AAGACAGGAAATTTGCTTAGCTCCTACAAT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2800909 27 - 123690457 AAGAC---GAATTTGCTTAGCTCCTACCAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314846 30 - 204787373 AGGACAGGAAATCTGCTTATCCCCTACCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380175 30 - 192460366 AGGACAGGAAATCTGCTTATCCCCTACCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119709 30 - 19675229 AGGACAGGAAATCTGCTTATCCCCTACCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352495 27 - 16847902 AGGACAGGAAATCTGCTTAT---CTACCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91325929 25 + 91754291 CAGACAGGAAATCTGCT-----CCTACCAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376504 30 + 1977891 AGGACAGGAAATCTGCTTATCCCCTACCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331691 30 - 7796314 AAGATAGGAAATCTGCTTAGCTCCTACCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73804916 30 + 74750902 AAGAAAGGAAATGTGCTTAGCTCCTACCAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255599 30 - 17725628 AAGAAAGGAGATTTGCTTAGCTCCTACCAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343568 30 + 6778120 AGGAAAGGAAATTTGCTTAGCTCCTACCAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 18668 30 - 21398 AGGAAAGGAAATCTGCTTAGCTCCTACCAG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88364005 30 + 114275543 AAGAAAGGAAGTTTGCTTAGCTCCTACCAT i micMur3.chr1 I 179 I 6 s proCoq1.NW_012133858v1 14774242 30 - 22200726 AAGAAAGGAAGTTTGCTTAGGTCCTACCAT i proCoq1.NW_012133858v1 C 0 I 215 s otoGar3.GL873829 184047 30 + 608964 AAGAAAGGAAGTGTGTTTAGCTCTGGCCAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32766669 12 + 98207768 ------------------GGCTTGTACTAT i mm10.chr16 C 0 C 0 s canFam3.chr33 2300547 29 - 31377067 AAGAAAGCAAGCCC-CTTAGCCACAGCCAC i canFam3.chr33 I 1 I 7 s dasNov3.JH569502 2676613 30 - 6579706 AAGAAAGGAAGTTCCTTTAGTCCCTACCAT i dasNov3.JH569502 C 0 C 0 a score=488952.000000 s hg38.chr3_KI270934v1_alt 30269 47 + 163458 -------GCGCCC------------TGCTGCACAGTGGC---CCCA--AT--GCCTGCAAAAGAGACAGCACC s panTro5.chr3 2492590 47 - 202621043 -------GCGCCC------------TGCTGCACAGTGGC---CCCA--AT--GCCTGCAAAAGAGACAGCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90603 47 - 190779 -------GCGCCC------------TGCTGCACAGTGGC---CCCA--AT--GCCTGCAAAAGAGACAGCACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13133 47 + 55620 -------GCGCCC------------TGCTGCACAGTGGC---CCCC--AT--GCCTGCAAAAGAGACAGCACC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2800936 47 - 123690457 -------ACGCCC------------TGCTGCACAGTGGC---CCCA--AT--GCCTGCAAAAGAGACAGCACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314876 47 - 204787373 -------GCACCC------------TGCTGCACAGTGGC---CCCA--GT--GCCTGAAAAAGAGACAGCACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380205 47 - 192460366 -------GCACCC------------TGCTGCACAGTGGC---CCCA--GT--GCCTGAAAAAGAGACAGCACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119739 47 - 19675229 -------GCACCC------------TGCTGCACAGTGGC---CCCA--GG--GCCTGAAAAAGAGACAGCACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352522 47 - 16847902 -------GCACCC------------TGCTGCACAGTGGC---CCCA--GT--GCCTGCAGAAGAGACAGCACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91325954 45 + 91754291 -------GCGCCC------------TGCTGCACAGTGGC---CCCA--GT--GCCTG--AAAGAGACAGCACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376534 47 + 1977891 -------GCACCC------------TGCTGCACAGTGGC---CCCA--GT--GCCTGCAGAAGAGACAGCACC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331721 45 - 7796314 -------GCGCCC------------TGCTGCACAGTGGC---CCCA--GT--GCCTG--CAAGAGACAGCACC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73804946 46 + 74750902 -------GTGCTC------------TGCTGCACAGT-CC---CCCA--AT--GCCTGCAAAAGAGACAGCGCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255629 46 - 17725628 -------GTGCTC------------TGCTGCACAGT-CC---CCTA--GT--GCCTGCCAAAGAGACAGCACC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343598 46 + 6778120 -------GTGCTC------------TGCTGCACTGT-CC---CCCA--GT--GCCTGCAAAAGAGACAGCACC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 18698 44 - 21398 -------GTGCTC------------TGCTGCACAGT-CC---CC-A--GT--GCCTGCAAAAGAGAC-GCACC i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88364041 49 + 114275543 -------ATGCCC------------TGCTGCACGATGGC---CCCAACAT--GCCTGCAAGGGAGACAGTACC i micMur3.chr1 I 6 I 161 s otoGar3.GL873829 184077 49 + 608964 -------GTGCCC------------TGCTGCACAGTGGC---CCCAAGAT--GCCTGCAAGAAAGACAGTACC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32766681 19 + 98207768 ------------G------------TGCTATGTAATAAC---CCCA--------------------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2300583 49 - 31377067 -------GGCCCC------------TGGGGCTTTGCTGC---CCCA--GCAAGCGTGCGAGGGAGATGGTGAC i canFam3.chr33 I 7 C 0 s dasNov3.JH569502 2676643 71 - 6579706 GTGCCAGGCCCCCCATCAAGGCATGTGCTGTACTATGCCTAATCCA--ACAAGCCTGCCAGGGAGacaggaac i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774272 215 - 22200726 I a score=183987.000000 s hg38.chr3_KI270934v1_alt 30316 22 + 163458 -----CTATTCACTGCCCAAGGTC-ATG s panTro5.chr3 2492637 22 - 202621043 -----CTATCCACTGCCCAAGGTC-ATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90650 22 - 190779 -----CTATCCACTGCCCAAGGTC-ATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13180 22 + 55620 -----CTATCCACTGCCCAAGGTC-ATG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2800983 22 - 123690457 -----CTGTCCACTGCCCAAGGTC-ACG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314923 22 - 204787373 -----CTGTCCACTGCCCAGGGTC-ACG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380252 22 - 192460366 -----CTGTCCACTGCCCAGGGTC-ACG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119786 22 - 19675229 -----CTGTCCACTGCCCAGGGTC-ACG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352569 22 - 16847902 -----CTGTCCACTGCCCAGGGTC-ATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91325999 22 + 91754291 -----CTGTCCACTGCCCAGGGTC-ACG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376581 22 + 1977891 -----CTGTCCACTGCCCAGGGTC-ATG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331766 22 - 7796314 -----CTGTCCACTGCCCAGGGTC-ATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73804992 23 + 74750902 -----CTGTCCACCGCACAAGGTCAATG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255675 23 - 17725628 -----CTGTCCGCCGTGCAAGGGCTATG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343644 23 + 6778120 -----CTGTCCACCGTGCAAGGTCAATG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 18742 22 - 21398 -----CTGTCCACCGCGCAA-GTCGATG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 184126 21 + 608964 ------AGCTCCCTGTGGAGGCCA-CTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32766700 22 + 98207768 -----CCATTCGTTCAACGAGGAC-ATA i mm10.chr16 C 0 I 58 s canFam3.chr33 2300632 22 - 31377067 -----CGGTCCACGGCCCGAGGTT-ACC i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2676714 27 - 6579706 tgggtaggtcaatcacccaaggcc-att i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774272 215 - 22200726 I e micMur3.chr1 88364090 161 + 114275543 I a score=291940.000000 s hg38.chr3_KI270934v1_alt 30338 29 + 163458 -AGAAGGGC----------------CATGCTGGATTCCAAAGCCAT s panTro5.chr3 2492659 29 - 202621043 -AGAAGGGC----------------CAtgctggattccaaagccat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90672 29 - 190779 -AGAAGGGC----------------CAtgctggattccaaagccat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13202 29 + 55620 -AGAAGGGC----------------CAtgctggattccaaagccat i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801005 29 - 123690457 -AGAAGGGC----------------CACGTTGGATTCCAAAGCCAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314945 28 - 204787373 -AG-AGGGC----------------CGTGCTGGATTCCAAAGCCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380274 28 - 192460366 -AG-AGGGC----------------CGTGCTGGATTCCAAAGCCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119808 28 - 19675229 -AG-AGGGC----------------CGTGCTGGATTCCAAAGCCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352591 28 - 16847902 -AG-AGGGC----------------CGTGCTGGATTCCAAAGCCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326021 28 + 91754291 -AG-AGGGT----------------TGtgctggattccaaagccat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376603 28 + 1977891 -AG-AGGGC----------------CGTGCTGGATTCCAAAGCCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331788 28 - 7796314 -AG-AGGGC----------------CGTGCTGGATTCTAAAGCCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805015 29 + 74750902 -AGAAGGGC----------------CATGCTGCATTCCAAAGCCAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255698 29 - 17725628 -AGAAGGGC----------------CGTGCTGGATTCCAAGGCCAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343667 29 + 6778120 -AGAAGGGC----------------TGAGCTGGATTCCAAAGCCAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 18764 29 - 21398 -AGGAGGGC----------------CGTGCTGGATTCCAAAGCCAT i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 184147 23 + 608964 -AGCAGGGC----------------------GGATTGGAACACCAT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2300655 29 - 31377067 -AGCAGGGC----------------AGGACCCGAGTCCGGCGCCGT i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2676741 46 - 6579706 gggcagggcaggctttggactgaggtatatctggttctaaagccat i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774272 215 - 22200726 I e mm10.chr16 32766722 58 + 98207768 I e micMur3.chr1 88364090 161 + 114275543 I a score=127536.000000 s hg38.chr3_KI270934v1_alt 30367 15 + 163458 GCTCTTGCCACCAAC s panTro5.chr3 2492688 15 - 202621043 gctcttgccaccaac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90701 15 - 190779 gctcttgccaccaac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13231 15 + 55620 gctcttgccaccaac i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801034 15 - 123690457 GCTCTTGCCACCAAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314973 15 - 204787373 GCTCTTGCCACCAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380302 15 - 192460366 GCTCTTGCCACCAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119836 15 - 19675229 GCTCTTGCCACCAAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352619 15 - 16847902 GCTATTGCCACCAAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326049 15 + 91754291 gctcttgccaccaac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376631 15 + 1977891 GCTCTTGCCACCAAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331816 15 - 7796314 GCTCTTGCCACCAAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805044 6 + 74750902 GCTCTT--------- i calJac3.chr17 C 0 I 2 s saiBol1.JH378146 17255727 7 - 17725628 GCTCTTG-------- i saiBol1.JH378146 C 0 I 3 s cebCap1.NW_016107444v1 6343696 15 + 6778120 GCTCTTGCCAGCAAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 18793 15 - 21398 GCTCTTGCCAGCAAC i aotNan1.NW_018492867v1 C 0 I 36 s otoGar3.GL873829 184170 14 + 608964 GC-CTTGGCATGAGC i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2676787 14 - 6579706 gttcttgccatgag- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774272 215 - 22200726 I e mm10.chr16 32766722 58 + 98207768 I e micMur3.chr1 88364090 161 + 114275543 I e canFam3.chr33 2300684 0 - 31377067 C a score=127545.000000 s hg38.chr3_KI270934v1_alt 30382 16 + 163458 ACCGCCCTGCCCTACC s panTro5.chr3 2492703 16 - 202621043 accaccctgcccTACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90716 16 - 190779 accaccctgcccTACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13246 16 + 55620 accaccctgcccTACC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801049 16 - 123690457 ACCGCCCTGCCCTGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2314988 16 - 204787373 ACCACCCCGTCCTACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380317 16 - 192460366 ACCAccccgtcctacc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119851 16 - 19675229 ACCACCCCATcctacc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352634 16 - 16847902 ACCACCCCGTCCTACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326064 16 + 91754291 accaccctgccccACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376646 16 + 1977891 ACCACCCCGTCCTACC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331831 16 - 7796314 ACCACCCCGTCCTACC i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 6343711 16 + 6778120 ACTGTCCTGCCCTGCC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 184184 15 + 608964 -CCATCCTGCCCTACC i otoGar3.GL873829 C 0 I 1 s dasNov3.JH569502 2676801 16 - 6579706 accctcccgcccTACC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774272 215 - 22200726 I e mm10.chr16 32766722 58 + 98207768 I e aotNan1.NW_018492867v1 18808 36 - 21398 I e micMur3.chr1 88364090 161 + 114275543 I e saiBol1.JH378146 17255734 3 - 17725628 I e calJac3.chr17 73805050 2 + 74750902 I e canFam3.chr33 2300684 0 - 31377067 C a score=67146.000000 s hg38.chr3_KI270934v1_alt 30398 10 + 163458 AAGCTCTCCA s panTro5.chr3 2492719 10 - 202621043 AAGCTCTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90732 10 - 190779 AAGCTCTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13262 10 + 55620 AAGCTCTCCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801065 10 - 123690457 AAGCTCTCCA i nomLeu3.chr11 C 0 I 6 s rheMac8.chr2 2315004 10 - 204787373 CAGCTCTCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380333 10 - 192460366 cagctctcca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119867 10 - 19675229 cagctctcca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352650 10 - 16847902 CAGCTCTCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326080 10 + 91754291 CAGCTCTCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376662 10 + 1977891 CAGCTCTCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331847 10 - 7796314 CAGCTCTCCA i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 6343727 10 + 6778120 ACGCTCTCCA i cebCap1.NW_016107444v1 C 0 I 7 s dasNov3.JH569502 2676817 10 - 6579706 ACACCTTCCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774272 215 - 22200726 I e mm10.chr16 32766722 58 + 98207768 I e aotNan1.NW_018492867v1 18808 36 - 21398 I e micMur3.chr1 88364090 161 + 114275543 I e saiBol1.JH378146 17255734 3 - 17725628 I e calJac3.chr17 73805050 2 + 74750902 I e canFam3.chr33 2300684 0 - 31377067 C e otoGar3.GL873829 184199 1 + 608964 I a score=33808.000000 s hg38.chr3_KI270934v1_alt 30408 12 + 163458 CCAACACCGCCC s panTro5.chr3 2492729 12 - 202621043 CCAACACCgccc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90742 12 - 190779 CCAACACCgccc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13272 12 + 55620 CCAACACCgccc i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2315014 12 - 204787373 CCGACACTGCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380343 12 - 192460366 ccgacactgccc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119877 12 - 19675229 ccgacactgccc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352660 12 - 16847902 CCGACACTGCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326090 1 + 91754291 C----------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376672 7 + 1977891 CCGA-----CCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331857 12 - 7796314 CCGACACCACCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805052 12 + 74750902 GCAACACCGTCC i calJac3.chr17 I 2 C 0 s saiBol1.JH378146 17255737 11 - 17725628 GTAACA-CGTCC i saiBol1.JH378146 I 3 C 0 e proCoq1.NW_012133858v1 14774272 215 - 22200726 I e mm10.chr16 32766722 58 + 98207768 I e aotNan1.NW_018492867v1 18808 36 - 21398 I e micMur3.chr1 88364090 161 + 114275543 I e dasNov3.JH569502 2676827 0 - 6579706 C e cebCap1.NW_016107444v1 6343737 7 + 6778120 I e canFam3.chr33 2300684 0 - 31377067 C e otoGar3.GL873829 184199 1 + 608964 I e nomLeu3.chr11 2801075 6 - 123690457 I a score=-30716.000000 s hg38.chr3_KI270934v1_alt 30420 62 + 163458 TGCCCTGCC--A---AGCTCTCCACCAACACCGCCCTGCCCTGCCAAGCTCTCCACCAACACCGCCC s panTro5.chr3 2492741 5 - 202621043 t--------------------------------------------------------------gccc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90754 5 - 190779 t--------------------------------------------------------------gccc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13284 36 + 55620 tgccctgcc--a---agctctccaccaacaccgccct--------------------------gccc i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2315026 36 - 204787373 TGACCTGCC--ACCAAGCTCTCCACTGACCCCGCCCTG----------------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380355 36 - 192460366 tgccctgcc--accaagctcttcactgaccccgccctg----------------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119889 36 - 19675229 tgccctgcc--accaagctctccactgaccccgccctg----------------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352672 58 - 16847902 TGCCCTGCC--ACCCAGCTCTCCACCGACCCTGCCCTGCC--ACCAAGCTCTCCACTG-----ACCC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1376679 58 + 1977891 TGCCCTGCC--ACCCAGCTCTCCACTGACCCTGCCCTGCC--ACCAAGCTCTCCACTG-----ACTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331869 36 - 7796314 TGCCCTGCC--ACCAAGCTCTCCACCGACATCGCCCTG----------------------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805064 9 + 74750902 TGCCCTGCC---------------------------------------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255748 9 - 17725628 CGCCCTGCC---------------------------------------------------------- i saiBol1.JH378146 C 0 C 0 s mm10.chr16 32766780 45 + 98207768 TGCCACGCCTGACTCCTCTTGCTGCTGATATCACCATACTCTTCC---------------------- i mm10.chr16 I 58 C 0 s dasNov3.JH569502 2676827 13 - 6579706 -----------GCTGAGCTCTCCA------------------------------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774272 215 - 22200726 I e aotNan1.NW_018492867v1 18808 36 - 21398 I e micMur3.chr1 88364090 161 + 114275543 I e cebCap1.NW_016107444v1 6343737 7 + 6778120 I e canFam3.chr33 2300684 0 - 31377067 C e otoGar3.GL873829 184199 1 + 608964 I e chlSab2.chr15 91326091 0 + 91754291 C e nomLeu3.chr11 2801075 6 - 123690457 I a score=12994.000000 s hg38.chr3_KI270934v1_alt 30482 9 + 163458 TGCCCTGCC s panTro5.chr3 2492746 9 - 202621043 tgccctgcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90759 9 - 190779 tgccctgcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13320 9 + 55620 tgccaagct i gorGor5.CYUI01001831v1 C 0 C 0 s cerAty1.NW_012004056v1 16352730 9 - 16847902 TGCCCTGCC i cerAty1.NW_012004056v1 C 0 I 3 s manLeu1.NW_012102020v1 1376737 9 + 1977891 TGCCCTGCC i manLeu1.NW_012102020v1 C 0 I 3 s colAng1.NW_012118932v1 7331905 7 - 7796314 --CCCTGCC i colAng1.NW_012118932v1 C 0 I 13 s canFam3.chr33 2300684 5 - 31377067 TGCCC---- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14774272 215 - 22200726 I e mm10.chr16 32766825 0 + 98207768 C e aotNan1.NW_018492867v1 18808 36 - 21398 I e micMur3.chr1 88364090 161 + 114275543 I e dasNov3.JH569502 2676840 0 - 6579706 C e macNem1.NW_012014355v1 19119925 0 - 19675229 C e saiBol1.JH378146 17255757 0 - 17725628 C e calJac3.chr17 73805073 0 + 74750902 C e cebCap1.NW_016107444v1 6343737 7 + 6778120 I e otoGar3.GL873829 184199 1 + 608964 I e chlSab2.chr15 91326091 0 + 91754291 C e macFas5.chr2 192380391 0 - 192460366 C e rheMac8.chr2 2315062 0 - 204787373 C e nomLeu3.chr11 2801075 6 - 123690457 I a score=-52497.000000 s hg38.chr3_KI270934v1_alt 30491 24 + 163458 AAGCTCTCAACCAACA-------------------------------------------------------------------------------------------------CCACCCTG s panTro5.chr3 2492755 24 - 202621043 aagctctccaccaaca-------------------------------------------------------------------------------------------------ccaccctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90768 24 - 190779 aagctctccaccaaca-------------------------------------------------------------------------------------------------ccaccctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13329 19 + 55620 c-----tccaccaaca-------------------------------------------------------------------------------------------------ccgccctg i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2315062 8 - 204787373 -----------------------------------------------------------------------------------------------------------------CCACCCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380391 8 - 192460366 -----------------------------------------------------------------------------------------------------------------ccACCCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119925 8 - 19675229 -----------------------------------------------------------------------------------------------------------------ccACCCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352742 121 - 16847902 AAGCTCTCCACTGACCCTGCCCTGCCACCCAGCTCTCCACTGACCCTGCCCTGCCACCAAGCTCTCCACTGACCCTGCCCTGCCACCAAGCTCTCCACCGACACCGCCCTGCCCCACCCAG i cerAty1.NW_012004056v1 I 3 C 0 s chlSab2.chr15 91326091 23 + 91754291 -----------CAACACCGCCCTGCC---------------------------------------------------------------------------------------CCACCCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376749 34 + 1977891 AAGCTCTCCACCGACACGGCCCTGCC---------------------------------------------------------------------------------------CCACCCAG i manLeu1.NW_012102020v1 I 3 C 0 s calJac3.chr17 73805073 10 + 74750902 ACGCTCTCCA--------------------------------------------------------------------------------------------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255757 10 - 17725628 ACGCTCTCCA--------------------------------------------------------------------------------------------------------------- i saiBol1.JH378146 C 0 C 0 s mm10.chr16 32766825 3 + 98207768 -------------AAA--------------------------------------------------------------------------------------------------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2300689 10 - 31377067 ---------------------------------------------------------------------------------------------------------------AAACCCCCAG i canFam3.chr33 C 0 I 3 e proCoq1.NW_012133858v1 14774272 215 - 22200726 I e aotNan1.NW_018492867v1 18808 36 - 21398 I e micMur3.chr1 88364090 161 + 114275543 I e dasNov3.JH569502 2676840 0 - 6579706 C e cebCap1.NW_016107444v1 6343737 7 + 6778120 I e otoGar3.GL873829 184199 1 + 608964 I e colAng1.NW_012118932v1 7331912 13 - 7796314 I e nomLeu3.chr11 2801075 6 - 123690457 I a score=11440.000000 s hg38.chr3_KI270934v1_alt 30515 4 + 163458 CCCT s panTro5.chr3 2492779 4 - 202621043 ccct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90792 4 - 190779 ccct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13348 4 + 55620 ccct i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2315070 4 - 204787373 CTCT i rheMac8.chr2 C 0 I 3 s macFas5.chr2 192380399 4 - 192460366 CTCT i macFas5.chr2 C 0 I 3 s macNem1.NW_012014355v1 19119933 4 - 19675229 CTCT i macNem1.NW_012014355v1 C 0 I 3 s cerAty1.NW_012004056v1 16352863 4 - 16847902 CTCT i cerAty1.NW_012004056v1 C 0 I 3 s chlSab2.chr15 91326114 4 + 91754291 CTCT i chlSab2.chr15 C 0 I 3 s manLeu1.NW_012102020v1 1376783 4 + 1977891 CTCT i manLeu1.NW_012102020v1 C 0 I 3 s otoGar3.GL873829 184200 3 + 608964 CCC- i otoGar3.GL873829 I 1 I 1 s mm10.chr16 32766828 3 + 98207768 -CAT i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14774272 215 - 22200726 I e aotNan1.NW_018492867v1 18808 36 - 21398 I e micMur3.chr1 88364090 161 + 114275543 I e dasNov3.JH569502 2676840 0 - 6579706 C e saiBol1.JH378146 17255767 0 - 17725628 C e calJac3.chr17 73805083 0 + 74750902 C e cebCap1.NW_016107444v1 6343737 7 + 6778120 I e canFam3.chr33 2300699 3 - 31377067 I e colAng1.NW_012118932v1 7331912 13 - 7796314 I e nomLeu3.chr11 2801075 6 - 123690457 I a score=11922.000000 s hg38.chr3_KI270934v1_alt 30519 7 + 163458 GCCAAGC s panTro5.chr3 2492783 7 - 202621043 gccAAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90796 7 - 190779 gccAAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13352 7 + 55620 gccTAGC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2315077 6 - 204787373 GCTGGG- i rheMac8.chr2 I 3 C 0 s macFas5.chr2 192380406 6 - 192460366 GCTGGG- i macFas5.chr2 I 3 C 0 s macNem1.NW_012014355v1 19119940 6 - 19675229 GCTGGG- i macNem1.NW_012014355v1 I 3 C 0 s cerAty1.NW_012004056v1 16352870 6 - 16847902 GCTGGG- i cerAty1.NW_012004056v1 I 3 C 0 s chlSab2.chr15 91326121 6 + 91754291 GCTGGG- i chlSab2.chr15 I 3 C 0 s manLeu1.NW_012102020v1 1376790 6 + 1977891 GCTGGG- i manLeu1.NW_012102020v1 I 3 C 0 s colAng1.NW_012118932v1 7331925 6 - 7796314 GCTGGG- i colAng1.NW_012118932v1 I 13 C 0 s calJac3.chr17 73805083 6 + 74750902 GCTGGG- i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 17255767 6 - 17725628 GCTGGG- i saiBol1.JH378146 C 0 I 1 s otoGar3.GL873829 184204 6 + 608964 GCTGGG- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32766831 6 + 98207768 GCCAGT- i mm10.chr16 C 0 I 3 s canFam3.chr33 2300702 2 - 31377067 ----GG- i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 2676840 2 - 6579706 GT----- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774272 215 - 22200726 I e aotNan1.NW_018492867v1 18808 36 - 21398 I e micMur3.chr1 88364090 161 + 114275543 I e cebCap1.NW_016107444v1 6343737 7 + 6778120 I e nomLeu3.chr11 2801075 6 - 123690457 I a score=10920.000000 s hg38.chr3_KI270934v1_alt 30526 1 + 163458 T s panTro5.chr3 2492790 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90803 1 - 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13359 1 + 55620 T i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801081 1 - 123690457 T i nomLeu3.chr11 I 6 C 0 s rheMac8.chr2 2315083 1 - 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380412 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119946 1 - 19675229 T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352876 1 - 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326127 1 + 91754291 T i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376796 1 + 1977891 T i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331931 1 - 7796314 T i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 184210 1 + 608964 T i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32766840 1 + 98207768 T i mm10.chr16 I 3 C 0 s canFam3.chr33 2300704 1 - 31377067 T i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2676842 1 - 6579706 T i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774272 215 - 22200726 I e aotNan1.NW_018492867v1 18808 36 - 21398 I e micMur3.chr1 88364090 161 + 114275543 I e saiBol1.JH378146 17255773 1 - 17725628 I e calJac3.chr17 73805089 1 + 74750902 I e cebCap1.NW_016107444v1 6343737 7 + 6778120 I a score=562341.000000 s hg38.chr3_KI270934v1_alt 30527 48 + 163458 TCTCCAGGTCCTCAACCTC-------CC-CGACTCAC-TGCTGTTCTCCGCAGCCCA s panTro5.chr3 2492791 48 - 202621043 TCTCCAGGTCCTCAACCTC-------CC-CGACTCAC-TGCTGTTCTCCGCAGCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90804 48 - 190779 TCTCCAGGTCCTCAACCTC-------CC-CGACTCAC-TGCTGTTCTCCGCAGCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13360 48 + 55620 TCTCCAGGTCCTCAACCTC-------CC-CGACTCAC-TGCTGTTCTCCGCAGCCCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801082 48 - 123690457 TCTCCAGGTCCTCAGCCTC-------CC-CAGCTCAC-TGCTCTTCTCCGCAGCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2315084 48 - 204787373 CCTCCAGGTCCTCAGCCTC-------CC-CGACTCAC-TGCTCCTCTCTGCAGCCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380413 48 - 192460366 CCTCCAGGTCCTCAGCCTC-------CC-CGACTCAC-TGCTCCTCTCTGCAGCCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119947 48 - 19675229 CCTCCAGGTCCTCAGCCTC-------CC-CGACTCAC-TGCTCCTCTCTGCAGCCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352877 48 - 16847902 CCTCCAGGTCCTCAGCCTC-------CC-CGACTCAC-TGCTCTTCTCTGCAGCCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326128 48 + 91754291 CCTCCAGGTCCTCAGCCTC-------CC-TGACTCAC-TGCTCTTCTCTGCAGCCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376797 48 + 1977891 CCTCCAGGTCCTCAGCCTC-------CC-CGACTCAC-TGCTCTTCTCTGCAGCCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331932 48 - 7796314 TCTCCAGGTCCTCAGCCTC-------CC-TGACTCAC-TGCTCTTCTCTGCAGCCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805090 48 + 74750902 TCTCCAGGTCCTCGGCCTC-------CC-CGACTCAC-TGCTCTTCTCCACAGCCCA i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17255774 55 - 17725628 TCTCCAGGTCCTCGGCCTCCCGGCCTCC-CGACTCAC-TGCTCTTCTCCGCAGCCCA i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 6343744 48 + 6778120 TCTCCAGGTCCTCAGCCTC-------CC-TGACCCCC-TGCTCTTCTCCACAGCCCA i cebCap1.NW_016107444v1 I 7 C 0 s aotNan1.NW_018492867v1 18844 46 - 21398 TCTCCAGGTCCTCCGCCTC-------CC-TGACTCAC-TGCTCTTCTCTGCAGCC-- i aotNan1.NW_018492867v1 I 36 C 0 s otoGar3.GL873829 184211 49 + 608964 TCTCCAGGTCCTCTACCTC-------CCTCAACATGC-TGTTCTTCTCCACAGACCG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32766841 47 + 98207768 TCCCCGGGGCCCCCGCC-C-------TC-TGACAAAC-TGTCCTTCTTCACAGATGA i mm10.chr16 C 0 C 0 s canFam3.chr33 2300705 49 - 31377067 GCTGCAGGTCCTGCGTCTC-------CC-CGCAACATGTGCTCTCCCCCACAGGCCG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2676843 41 - 6579706 CCTTCATCTCCT--------------CA-CAACATGC-TCCTCTTCTTCACAGATCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774272 215 - 22200726 I e micMur3.chr1 88364090 161 + 114275543 I a score=16013.000000 s hg38.chr3_KI270934v1_alt 30575 1 + 163458 G s panTro5.chr3 2492839 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90852 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13408 1 + 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801130 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2315132 1 - 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380461 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119995 1 - 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352925 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326176 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376845 1 + 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331980 1 - 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805138 1 + 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255829 1 - 17725628 G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343792 1 + 6778120 G i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 18890 1 - 21398 A i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 14774487 1 - 22200726 G i proCoq1.NW_012133858v1 I 215 C 0 s otoGar3.GL873829 184260 1 + 608964 G i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32766888 1 + 98207768 G i mm10.chr16 C 0 C 0 s canFam3.chr33 2300754 1 - 31377067 A i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2676884 1 - 6579706 G i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88364090 161 + 114275543 I a score=2154620.000000 s hg38.chr3_KI270934v1_alt 30576 120 + 163458 GAACTGGAGCCACAGAGCTGGTGCTGCCGCTGGAATGACAAGCCCTACCTCTGTGCCCTGTACCAGCAGAGGCGGCCCCACGTGGGCTGTGCTACATACAGGCCCCCACAGCCCGGTGAG s panTro5.chr3 2492840 120 - 202621043 GAACTGGAGCCGCAGAGCTGGTGCTGCCGCTGGAATGACAAGCCCTACCTCTGTGCCCTGTACCAGCAGAGGCGGCCCCACGTGGGCTGTGCTACATACAGGCCCCCACGGCCCGGTGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90853 120 - 190779 GAACTGGAGCCGCAGAGCTGGTGCTGCCGCTGGAATGACAAGCCCTACCTCTGTGCCCTGTACCAGCAGAGGCGGCCCCACGTGGGCTGTGCTACATACAGGCCCCCACGGCCCGGTGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13409 120 + 55620 GAACTGGAGCCGCAGAGCTGGTGCTGCCGCTGGAATGACAAGCCCTACCTCTGTGCCCTGTACCAGCAGAGGCGGCCCCACGTGGGCTGTGCTACATACAGGCCCCCACGGCCTGGTGAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801131 120 - 123690457 GAACTGGAGCCGCAGAGCTGGTGCTGCCGCTGGAATGACAAGCCCTACCTCTGTGCCCTGTACCAGCAGAAGCGGCCCCGCGTGGGCTGTGCTACATACAGGCCCCCACGGCCTGGTGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2315133 120 - 204787373 GAACTGGAACCGCAGAACTGGTGCTGCCTCTGGAATGACAAGCCCTACCTCTGTGCCCTGTACCAGCAGAGGCGGCCCCGCGTGGGCTGTGCTACATACAGACCCCCACGGCCTGGTGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380462 120 - 192460366 GAACTGGAACCGCAGAACTGGTGCTGCCTCTGGAATGACAAGCCCTACCTCTGTGCCCTGTACCAGCAGAGGCGGCCCCGCGTGGGCTGTGCTACATACAGACCCCCACGGCCTGGTGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19119996 120 - 19675229 GAACTGGAACCGCAGAACTGGTGCTGCCTCTGGAATGACAAGCCCTACCTCTGTGCCCTGTACCAGCAGAGGCGGCCCCGCGTGGGCTGTGCTACATACAGACCCCCACGGCCTGGTGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16352926 120 - 16847902 GAACTGGAACCGCAGAACTGGTGCTGCCTCTGGAATGACAAGCCCTACCTCTGTGCCTTGTACCAGCAGAGGCGGCCCCGCGTGGACTGTGCTACATACAGACCCCCACGGCCTGGTGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326177 120 + 91754291 GAACTGGAACCGCAGAGCTGGTGCTGCCTCTGGAATGACAAGCCTGACCTCTGTGCCCTGTACCAGCAGAGGCGGCCCCGTGTGGGCTGTGCTACATACAGACCCCCACGGCCTGGTGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376846 120 + 1977891 GAACTGGAACCGCAGAACTGGTGCTGCCTCTGGAATGACAAGCCCTACCTCTGTGCCCTGTACCAGCAGAGGCGGCCCCGCGTGGGCTGTGCTACATACAGACCCCCACGGCCTGGTGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7331981 120 - 7796314 GAGCTGGAACCACAGAGCTGGTGCTGCCTCTGGAATGACAAGCCCTACCTCTGTGCCCTGTACCAGCAGAGGCGGCCCCGCGTGGGCTGTGCTACATACAGACCCCCATGGCCCGGTGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805139 120 + 74750902 GAACTGGAGCCGCAGAGCTGGTGCTGCCGCTGGAATGACAAGCCCTACCTCTGTGCCCTGTACCAGCAGAGGCGGCCCCGAGTAGGCTGCGCTGCATACAGGCCACCACGGCCCGGTGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255830 120 - 17725628 GAACTGGAGCCGCAGAGCTGGTGCTGCCGCTGGAATGACAAGCCGTACCTCTGTGCCCTGTACCAGCAGAGGCGGCCCCGAGTAGGCTGCGCTGCGCACAGGCCCCCGCGGCCCGGTGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343793 120 + 6778120 GAACTGGAGCCGCAGAGCTGGTGCTGCCGCTGGAATGACAAGCCCTACCTCTGTGCCCTGTACCAGCAGAGGCGTCCCCGAGTAGGCTGCGCTTCGTATCGGCCCCTGCGGCCCGGTGAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 18891 116 - 21398 GGACTGGAGCCGCAGAGCTGGTGCTGCCGCTGGAATGACAAGCCCTACCTCTGTG-CCTGTACCAGCAGAGGCG--CCCGAGTAGGCTGCGCTGCGTACA-GCCCCCACGGCCCGGTGAG i aotNan1.NW_018492867v1 C 0 I 61 s micMur3.chr1 88364251 120 + 114275543 GAACTGGAGCCGTATAACTGGTGCTGCCGCTGGAATGACAAGCCCTACCTCTGCACCCAGTACCGGCAGAGGCGTCCCTGCATTGGCTGTGCTGGATACAGGCCCCCACGGCCAGGTGAG i micMur3.chr1 I 161 C 0 s proCoq1.NW_012133858v1 14774488 120 - 22200726 GAACTGGAGCCGCAGGACTGGTGCTGCCGCTGGAATGACAAGCCCTACCTCTGCACCCAGTACTGGCTGCGGCGGCCCCGCGTTGGCTGTGCTGGATACAGGCCCCCACGGCCCGGTGAG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 184261 120 + 608964 GAACTGGAGCCGCAGAGCTGGTGCTGCCGCTGGAATGATAAGCCCTACCTCTGCGCCCTGTACCAGCAGAGGCGGCCGCCCATCAGCTGTGCTGGGTACCGACCACCACGGCCTGGTGAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32766889 120 + 98207768 GAGCAGGAGGCACAGAACTGGTGCTGCCAATGGAACGACAAGCCCTCGTTCTGTGTCTGGTACCAGCTTAGGCGGCCCCGTGTCAGCTGTGCTGGGTACAGGCCCCCACGGCCCGGTGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2300755 120 - 31377067 GAACTGGAGCCCCAGAACTGGTGCTGCCGCTGGAGCGACCGGCCCATGCTCTGCGCCCTGTACCAGCAGAGGCGGCCCCGCGTGGGCTGCGCCGGGTACCGGCCCCCGAGGCCCGGTGAG i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 2676885 117 - 6579706 GAACTGGAACCGCAGAACTGGTGCTGCCGCTGGAG---CAAGCCCTTCTTTTGTGCCCTGTACCAGCAAAGGTGGCCTCGCATCAGCTGTGCTGGCTATAGGCCTCCACGCCTCGGTGAG i dasNov3.JH569502 C 0 I 2 a score=129939.000000 s hg38.chr3_KI270934v1_alt 30696 15 + 163458 CGACAGGGC--CCAGGC s panTro5.chr3 2492960 15 - 202621043 CGACAGGGC--CCAGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90973 15 - 190779 CGACAGGGC--CCAGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13529 15 + 55620 CAACAGGGC--CCAGGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801251 15 - 123690457 TGACAGGGC--CCAGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2315253 15 - 204787373 CCTCAGGGC--CCAGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380582 15 - 192460366 CCTCAGGGC--CCAGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19120116 15 - 19675229 CCTCAGGGC--CCAGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16353046 15 - 16847902 CCTCAGGGC--CCAGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326297 15 + 91754291 CGTCAGGGC--CCAGGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376966 15 + 1977891 CCTCAGGGC--CCAGGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7332101 15 - 7796314 CGTCAGGGC--CCAGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805259 14 + 74750902 -GGTCAGGG--CCAGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255950 14 - 17725628 -GGTCAGGT--CCAGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343913 14 + 6778120 -GGTCAGGT--CCAGGC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88364371 15 + 114275543 GGTCAGGGC--CCAGGC i micMur3.chr1 C 0 I 71 s proCoq1.NW_012133858v1 14774608 15 - 22200726 GGTCAGGGC--TCAGGC i proCoq1.NW_012133858v1 C 0 I 71 s otoGar3.GL873829 184381 15 + 608964 GGGCAAAGC--CCAGGC i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32767009 8 + 98207768 CATCATGG--------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2300878 17 - 31377067 GGGCAGGGCGGTGGGGC i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 2677004 15 - 6579706 TGCTGGGGT--CAGGGC i dasNov3.JH569502 I 2 C 0 e aotNan1.NW_018492867v1 19007 61 - 21398 I a score=6734.000000 s hg38.chr3_KI270934v1_alt 30711 1 + 163458 C s panTro5.chr3 2492975 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90988 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13544 1 + 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801266 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2315268 1 - 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380597 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19120131 1 - 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16353061 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326312 1 + 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376981 1 + 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7332116 1 - 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805273 1 + 74750902 T i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255964 1 - 17725628 T i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343927 1 + 6778120 T i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 2300895 1 - 31377067 C i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2677019 1 - 6579706 T i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774623 71 - 22200726 I e mm10.chr16 32767017 0 + 98207768 C e aotNan1.NW_018492867v1 19007 61 - 21398 I e micMur3.chr1 88364386 71 + 114275543 I e otoGar3.GL873829 184396 1 + 608964 I a score=389568.000000 s hg38.chr3_KI270934v1_alt 30712 50 + 163458 CAGGAAGAGCCTCTGGGGAGGGGGAGCTTCTGGGCTTCCGGGAGGTGGCA s panTro5.chr3 2492976 50 - 202621043 CAGGAAGAGCCTCTGGGGAGGGGGAGCTTCTGGGCTTCCGGGAGGTGGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90989 50 - 190779 CAGGAAGAGCCTCTGGGGAGGGGGAGCTTCTGGGCTTCCGGGAGGTGGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13545 50 + 55620 CAGGAAGAGCCTCTGGGGAGGGGGAGCTTCTGGGCTTCCGGGAGGTGGCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801267 50 - 123690457 CAGGAAGAGCCTCTGGGGAGGGGGAGCTTCTGGGCTTCCAGGAGGTGGCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2315269 50 - 204787373 CAGGCAGAGCCTCTGGGGAGGGGGAGCTTCTGGGCTTCCAGGAGGTGGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380598 50 - 192460366 CAGGCAGAGCCTCTGGGGAGGGGGAGCTTCTGGGCTTCCAGGAGGTGGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19120132 50 - 19675229 CAGGCAGAGCCTCTGGGGAGGGGGAGCTTCTGGGCTTCCAGGAGGTGGCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16353062 50 - 16847902 CAGGCAGAGCCTCTGGGGAGGGGGAGCTTCTGGGCTTCCAGGAGGTGGCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326313 50 + 91754291 CAGGCAGAGCCTCTGGGGAGGGGGAGCTTCTGGACTTCCAGGAGGTGGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1376982 50 + 1977891 CAGGCAGAGCCTCTGGGGAGGGGGAGCTTCTGGGCTTCCAGGAGGTGGCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7332117 50 - 7796314 CAGGCAGAGCCTCTGGGGAGGGGGAGCTTCTGGGCTTCCAGGAGGTGGCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805274 47 + 74750902 CAGGCAGAGCATCTGGGGA-GGGGAGCTTCTGGGCCTCCGGGATGACG-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17255965 47 - 17725628 CAGGCAGAGCATCTGGGGA-GGGGAGCTTCTGGGCCTCCGGGACGACG-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343928 46 + 6778120 CAGGCAGAGCATCTGGGGA-GGGGAGCTTCT-GGCCTCTGGGACGACG-- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 184397 36 + 608964 ------CAGCGTCTGGGGCAGGGTAGCCTGT-GGCCTTTGGGA------- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32767017 24 + 98207768 ------------TTGGGG------------TGGATTAGCAAGGGGCCA-- i mm10.chr16 C 0 I 3 s canFam3.chr33 2300896 25 - 31377067 ---------CAACCGAGG-------------GGCCTTGTGGGTGGCA--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2677020 50 - 6579706 GAGGTAGAGCATCTTGGGCGGGGTGGCCTGTTAGCCTCTGGAATAAGGAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774623 71 - 22200726 I e aotNan1.NW_018492867v1 19007 61 - 21398 I e micMur3.chr1 88364386 71 + 114275543 I a score=134867.000000 s hg38.chr3_KI270934v1_alt 30762 15 + 163458 TCTGGATAAGGAGTA s panTro5.chr3 2493026 15 - 202621043 TCTGGATAAGGAGTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91039 15 - 190779 TCTGGATAAGGAGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13595 15 + 55620 TCTGGATAAGGAGTA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801317 15 - 123690457 TCTGGATGAGCAGTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2315319 15 - 204787373 TCTGGATGAGGAGTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380648 15 - 192460366 TCTGGATGAGGAGTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19120182 15 - 19675229 TCTGGATGAGGAGTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16353112 15 - 16847902 TCTGGATGAGGAGTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326363 15 + 91754291 TCTGGATGAGGAGTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1377032 15 + 1977891 TCTGGATGAGGAGTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7332167 15 - 7796314 TCTGCATGAGGAGTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805321 15 + 74750902 TCTGAATGAGGAGTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256012 15 - 17725628 TCTGGAGGAGGAGTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343974 15 + 6778120 TCTGGATGAGGAGTA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19068 15 - 21398 TCTGGATGAGGCGTA i aotNan1.NW_018492867v1 I 61 C 0 s otoGar3.GL873829 184433 15 + 608964 CATGGGGCAGGACCA i otoGar3.GL873829 C 0 I 10 s mm10.chr16 32767044 6 + 98207768 TCCTAA--------- i mm10.chr16 I 3 C 0 s canFam3.chr33 2300921 7 - 31377067 ------CCGGGAG-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2677070 15 - 6579706 GCTGAGCCAGGGACG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774623 71 - 22200726 I e micMur3.chr1 88364386 71 + 114275543 I a score=506026.000000 s hg38.chr3_KI270934v1_alt 30777 34 + 163458 ------------GGGGCAGAGCTGTGG-CCACAAGGG-AAGATGGAGA s panTro5.chr3 2493041 34 - 202621043 ------------GGGGCAGAGCTGTGG-CCACAAGGG-AAGATGGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91054 34 - 190779 ------------GGGGCAGAGCTGTGG-CCACAAGGG-AAGATGGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13610 34 + 55620 ------------GGGGCAGAGCTGTGG-CCACAAGGG-AAGATGGAGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801332 34 - 123690457 ------------GGGGCAGAGCCGTGG-CCACAAGGG-AAGATGGAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2315334 34 - 204787373 ------------GGGGCAGAGCTGTGG-CCACAAGGG-AAGATGGAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380663 34 - 192460366 ------------GGGGCAGAGCTGTGG-CCACAAGGG-AAGATGGAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19120197 34 - 19675229 ------------GGGGCAGAGCTGTGG-CCACAAGGG-AAGATGGAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16353127 34 - 16847902 ------------GGGGCAGAGCTGTGG-CCACAAGGG-AAGATGGAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326378 34 + 91754291 ------------GGGGCAGAGCTGTGG-CCACAAGGG-AAGATGGAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1377047 34 + 1977891 ------------GGGGCAGAGCTGTGG-CCACAAGGG-AAGATGGAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7332182 34 - 7796314 ------------GGGGCAGAGCTGTCG-CCACAAGGG-AAGATGAAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805336 35 + 74750902 ------------GGGGCAGAGCTGTGG-CCACAAGGGAAAGATGGAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256027 34 - 17725628 ------------GGGGCAGAGCTGTGG-CCACAAGGG-AAGACGGAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6343989 33 + 6778120 ------------GGGGCAGAGCTGTGG-CCACAGGG--AAGATGGAGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19083 34 - 21398 ------------GGGGCAGAGCTGTGGCCCACAGGG--AAGATGGAGA i aotNan1.NW_018492867v1 C 0 I 212 s micMur3.chr1 88364457 34 + 114275543 ------------GGGGCAGAGCTGTGG-CCACAAGGG-AGGAAGAAGA i micMur3.chr1 I 71 C 0 s proCoq1.NW_012133858v1 14774694 34 - 22200726 ------------GGGGCAGAGCCGTGG-CCACAAGGG-AAGAAGGAGA i proCoq1.NW_012133858v1 I 71 C 0 s otoGar3.GL873829 184458 34 + 608964 ------------TGGCCAGAGTTGTGG-CCACAAGGG-AAGATGGACA i otoGar3.GL873829 I 10 C 0 s mm10.chr16 32767050 30 + 98207768 ---------------ACAGAACTGCAG-CCACAGGG--ATGATGTTGA i mm10.chr16 C 0 I 1 s canFam3.chr33 2300928 22 - 31377067 -----------------GGGGCCGAAG-CAACCGTAG-ATG------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2677085 45 - 6579706 GACTAGTTTCCTGGCACAGAGCTGTAG-CCACAGGG--AAGGTGAGGA i dasNov3.JH569502 C 0 C 0 a score=23058.000000 s hg38.chr3_KI270934v1_alt 30811 3 + 163458 TGA s panTro5.chr3 2493075 3 - 202621043 TGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91088 3 - 190779 TGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13644 3 + 55620 TGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801366 3 - 123690457 TGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2315368 3 - 204787373 TGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380697 3 - 192460366 TGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19120231 3 - 19675229 TGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16353161 3 - 16847902 TGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326412 3 + 91754291 TGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1377081 3 + 1977891 TGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7332216 3 - 7796314 TGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805371 3 + 74750902 GGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256061 3 - 17725628 GGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6344022 3 + 6778120 GGG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88364491 3 + 114275543 TGA i micMur3.chr1 C 0 I 190 s proCoq1.NW_012133858v1 14774728 3 - 22200726 TGA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 184492 3 + 608964 TGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32767081 2 + 98207768 AG- i mm10.chr16 I 1 C 0 s canFam3.chr33 2300950 3 - 31377067 TGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2677130 3 - 6579706 TGC i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018492867v1 19117 212 - 21398 I a score=95423.000000 s hg38.chr3_KI270934v1_alt 30814 8 + 163458 CGCCAGTG s panTro5.chr3 2493078 8 - 202621043 CGCCAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91091 8 - 190779 CGCCAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13647 8 + 55620 TGCCAGTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801369 8 - 123690457 CGCCAGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2315371 8 - 204787373 CGCCAGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380700 8 - 192460366 CGCCAGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19120234 8 - 19675229 CGCCAGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16353164 8 - 16847902 CGCCAGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326415 8 + 91754291 CGCCAGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1377084 8 + 1977891 CGCCAGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7332219 8 - 7796314 CACCAGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805374 8 + 74750902 TGCCAGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256064 8 - 17725628 TGCCAGTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6344025 8 + 6778120 TGCCAGTG i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14774731 8 - 22200726 TTCCAGTG i proCoq1.NW_012133858v1 C 0 I 219 s otoGar3.GL873829 184495 8 + 608964 TTCCAGTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32767083 8 + 98207768 GTCTTGCG i mm10.chr16 C 0 C 0 s canFam3.chr33 2300953 8 - 31377067 CTTgggcg i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2677133 8 - 6579706 TTCCAGTG i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018492867v1 19117 212 - 21398 I e micMur3.chr1 88364494 190 + 114275543 I a score=911890.000000 s hg38.chr3_KI270934v1_alt 30822 124 + 163458 AT---GGGTGGATGGTCAGTGGA-------------------------------------------------------------------------------------------------------------------------------GGGGC---TTTGTACCTGA-GTTGGG-------GAAGGAGTGAGAATAGC-----G-----------------------------G---GGCACGAAAATGCAAGGAGGCTTGAGGGGAGGATTCTGTGCTCTGTGAACATCTCCCCAG---CTG s panTro5.chr3 2493086 124 - 202621043 AT---GGGCAGACGGTCAGTGGA-------------------------------------------------------------------------------------------------------------------------------GGGGC---TTTGTACCTGA-GTTGGG-------GAAGGAGTGAGAATAGC-----G-----------------------------G---GGCACGAAAATGCAAGGAGGCTTGAGGGGAGGATTCTGTGCTCCGTGAACATCTCCCCAG---CTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91099 124 - 190779 AT---GGGCAGACGGTCAGTGGA-------------------------------------------------------------------------------------------------------------------------------GGGGC---TTTGTACCTGA-GTTGGG-------GAAGGAGTGAGAATAGC-----G-----------------------------G---GGCACGAAAATGCAAGGAGGCTTGAGGGGAGGATTCTGTGCTCCGTGAACATCTCCCCAG---CTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13655 124 + 55620 AT---GGGCGGATGGTCAGTGGA-------------------------------------------------------------------------------------------------------------------------------GGGGC---TTTGTACCTGA-GTTGGG-------GAAGGAGTGAGAACAGC-----C-----------------------------G---GGCACGAAAATGCAAGGAGGCTTGAGGGGAGGATTCTGTGCTCCGTGAACATCTCCCCAG---CTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801377 121 - 123690457 AT---GGGCGGACGGTCAGTGGA-------------------------------------------------------------------------------------------------------------------------------GGGGC---TTTGTACCTGA-GTTGGG-------GAAGGAGTGAGAGTAGC-----G-----------------------------G---GGCATG-AAATGCAAGAAGCCTTGAGGGGAGGATTCTGTGCTCTCTGAACA--TCCCCAG---CTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2315379 125 - 204787373 AT---GGGCGGACGGCCAGTGGA-------------------------------------------------------------------------------------------------------------------------------GGGGC---TTTGTACCTGGTGTTGGG-------GAAGGAGTGAGAATAGT-----G-----------------------------G---GGCACAAAAGTGCAAGGAGCCTTGAGGGGAGGAATCTGTGCTCCGTGAACATCTCCCCTG---CTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380708 125 - 192460366 AT---GGGCGGACGGCCAGTGGA-------------------------------------------------------------------------------------------------------------------------------GGGGC---TTTGTACCTGGTGTTGGG-------GAAGGAGTGAGAATAGT-----G-----------------------------G---GGCACAAAAGTGCAAGGAGCCTTGAGGGGAGGAATCTGTGCTCCGTGAACATCTCCCCTG---CTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19120242 125 - 19675229 AT---GGGCGGACGGCCAGTGGA-------------------------------------------------------------------------------------------------------------------------------GGGGC---TTTGTACCTGGTGTTGGG-------GAAGGAGTGAGAATAGT-----G-----------------------------G---GGCACAAAAGTGCAAGGAGCCTTGAGGGGAGGAATCTGTGCTCCGTGAACATCTCCCCTG---CTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16353172 125 - 16847902 AT---GGGCGGACGGCCAGTGGA-------------------------------------------------------------------------------------------------------------------------------GGGGC---TTTGTACCTGGTGTTGGG-------GAAGGAGTGAGAATAGT-----G-----------------------------G---GGCACAAAAGTGCAAGGAGCCTTGAGGGGAGGAATCTGTGCTCTGTGAACATCTCCCCTG---CTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326423 125 + 91754291 AT---GGGCGGACGGCCAGTGGA-------------------------------------------------------------------------------------------------------------------------------GGGGC---TTTGTACCTGGTGTTGGG-------GAAGGAGTGAGAATAGT-----G-----------------------------G---GGCACAAAAGTGCAAGGAGCCTTGAGGGAAGGAATCTGTGCTCCGTGAACATCTCCCCTG---CTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1377092 125 + 1977891 AT---GGGCGGACGGCCAGTGGA-------------------------------------------------------------------------------------------------------------------------------GGGGC---TTTGTACCTGGTGTTGGG-------GAAGGAGTGAGAATAGT-----G-----------------------------G---GGCACAAAAGTGCAAGGAGCCTTGAGGGGAGGAATCTGTGCTCCGTGAACATCTCCCCTG---CTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7332227 125 - 7796314 AT---GGGCGGACGGCCAGTGGA-------------------------------------------------------------------------------------------------------------------------------GGGGC---TTTGTACCTGGTGTTGGG-------GAAGGAGTAAGAATAGT-----G-----------------------------G---GGCACAAAAGTGCAAGGAGCCTTGAGGGGAGGAATCTGTGCTCCGTGAACATCTCCTGTG---CTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805382 119 + 74750902 ATG--GGGCTGATGGCAAATGGA-------------------------------------------------------------------------------------------------------------------------------GGCCC---TTTGTACCTGGTGCTGGA-------GAAGGAGTGAGAAT-GG-----G-----------------------------G---GGCACGAAAGTGC-AGGGGCCTTGAGGGGAGGATTCGATGA-----GAACATCTCCCCAG---CTG i calJac3.chr17 C 0 I 3 s saiBol1.JH378146 17256072 112 - 17725628 ATG--GGGCTGATGGCAAATGGA-------------------------------------------------------------------------------------------------------------------------------GGCCC---TTTGTACCTGGTGCTGGG-------GAAGGAGTGAGAA--GG-----G-----------------------------G---GGCACGA-------AGGGGCCTTGAGGGGAGGATTCTATGA-----GAACATCTCCCCAG---CTG i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 6344033 119 + 6778120 ATG--GGGCTGATGGCAAATGGA-------------------------------------------------------------------------------------------------------------------------------GGCCC---TTTGTACCTGGTGCTGGG-------GAAGGAGTGAGAAT-GG-----G-----------------------------G---AGCACGAAAGTGC-AGGGGCCTTGAGGGGAGGATTCTATGA-----GAACACCTCCCCAG---CTG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 184503 261 + 608964 --TG-GGGCTGATGGCAAATGGGATGTGTTTTTTGTTGTTCTTTTGGGATGttttgcagtttttttggccagggctgggtttgaacccaccacctctggtatatggggctggagccctactcctttgaaccacaggcgccaccACCAAATGGGGCATTTTTGTGCGTGGCATTGGG-------CAAGGGGTGAGAATGGGTGTTAA-----------------------------G---GACACAAAAGTGCAAGAGGCCTC--AGGGAAGATTCTGTTCTCCACAAATATCTCCCTAGGACTTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32767091 123 + 98207768 ---TGAAGCTAACAGCAAAC--A-------------------------------------------------------------------------------------------------------------------------------GGGAC---TTTGGACATGGCTTTTGC-------AAAGGGATGAGGACTGA-----G-----------------------------GCCAGGGACTACAAGGGAAGAGGACTTTGGGGGTAGATTCTGGATGCCTGGAGAATTTGCCCAA------ i mm10.chr16 C 0 C 0 s canFam3.chr33 2300961 56 - 31377067 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ccggg-------gg-------------gg-----g-----------------------------g---ggc---------------gcTTT---GGGGATGTTCTCTACTCCGTGAGCATCTCGCGGG---CCT i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2677141 151 - 6579706 ---TGGTGCCAATGGCAAATGGA-------------------------------------------------------------------------------------------------------------------------------GGGAC---TTTGTACATGGGGCTGGGAAAGAGAGAAGGGGTAGGGATGGG-----GAGATAATAAGCAGACATGGACAAGGTGGAG---GGCCCAAAAGGGCAAGAAGGCTTCCAGGGAGAATTCTCTACTCCATCAACATC------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774739 219 - 22200726 I e aotNan1.NW_018492867v1 19117 212 - 21398 I e micMur3.chr1 88364494 190 + 114275543 I a score=20055.000000 s hg38.chr3_KI270934v1_alt 30946 2 + 163458 AG s panTro5.chr3 2493210 2 - 202621043 AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91223 2 - 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13779 2 + 55620 AG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801498 2 - 123690457 AG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2315504 2 - 204787373 AG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380833 2 - 192460366 AG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19120367 2 - 19675229 AG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16353297 2 - 16847902 AG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326548 2 + 91754291 AG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1377217 2 + 1977891 AG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7332352 2 - 7796314 AG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17256185 2 - 17725628 AG i saiBol1.JH378146 I 1 C 0 s otoGar3.GL873829 184764 2 + 608964 AG i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 2301018 2 - 31377067 AG i canFam3.chr33 I 1 C 0 e proCoq1.NW_012133858v1 14774739 219 - 22200726 I e mm10.chr16 32767214 0 + 98207768 C e aotNan1.NW_018492867v1 19117 212 - 21398 I e micMur3.chr1 88364494 190 + 114275543 I e dasNov3.JH569502 2677292 0 - 6579706 C e calJac3.chr17 73805501 3 + 74750902 I e cebCap1.NW_016107444v1 6344152 0 + 6778120 C a score=15254.000000 s hg38.chr3_KI270934v1_alt 30948 3 + 163458 TCC s panTro5.chr3 2493212 3 - 202621043 TCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91225 3 - 190779 TCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13781 3 + 55620 TCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801500 3 - 123690457 TCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2315506 3 - 204787373 TCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192380835 3 - 192460366 TCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19120369 3 - 19675229 TCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16353299 3 - 16847902 TCC i cerAty1.NW_012004056v1 C 0 I 1051 s chlSab2.chr15 91326550 3 + 91754291 TCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1377219 3 + 1977891 TCC i manLeu1.NW_012102020v1 C 0 I 10121 s colAng1.NW_012118932v1 7332354 3 - 7796314 TCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805504 3 + 74750902 TCC i calJac3.chr17 I 3 C 0 s saiBol1.JH378146 17256187 3 - 17725628 CCC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 184767 2 + 608964 AC- i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 2301020 3 - 31377067 TTG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14774739 219 - 22200726 I e mm10.chr16 32767214 0 + 98207768 C e aotNan1.NW_018492867v1 19117 212 - 21398 I e micMur3.chr1 88364494 190 + 114275543 I e dasNov3.JH569502 2677292 0 - 6579706 C e cebCap1.NW_016107444v1 6344152 0 + 6778120 C a score=58409.000000 s hg38.chr3_KI270934v1_alt 30951 13 + 163458 GCCCGGACAAGTG s panTro5.chr3 2493215 13 - 202621043 GCCCGGACAAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91228 13 - 190779 TGCTGGACAAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13784 13 + 55620 GCCCGGACAAGTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801503 3 - 123690457 GCC---------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2315509 13 - 204787373 ACCTGGACAAGTG i rheMac8.chr2 C 0 I 328 s macFas5.chr2 192380838 13 - 192460366 ACCTGGACAAGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19120372 13 - 19675229 ACCTGGACAAGTG i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91326553 13 + 91754291 ACCTGGACAAGTG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7332357 13 - 7796314 ACCTGGACAAGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805507 13 + 74750902 ACCTGGACAAGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256190 13 - 17725628 ACCTGGACAAGTG i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 184769 13 + 608964 ACCTGGACAAATG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32767214 1 + 98207768 ------------G i mm10.chr16 C 0 C 0 s canFam3.chr33 2301023 7 - 31377067 GCCTGGA------ i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14774739 219 - 22200726 I e aotNan1.NW_018492867v1 19117 212 - 21398 I e micMur3.chr1 88364494 190 + 114275543 I e dasNov3.JH569502 2677292 0 - 6579706 C e cebCap1.NW_016107444v1 6344152 0 + 6778120 C e manLeu1.NW_012102020v1 1377222 10121 + 1977891 I e cerAty1.NW_012004056v1 16353302 1051 - 16847902 I a score=6680.000000 s hg38.chr3_KI270934v1_alt 30964 2 + 163458 CC s panTro5.chr3 2493228 2 - 202621043 CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91241 2 - 190779 CC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13797 2 + 55620 CC i gorGor5.CYUI01001831v1 C 0 C 0 s macFas5.chr2 192380851 2 - 192460366 TC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19120385 2 - 19675229 TC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91326566 2 + 91754291 TC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7332370 2 - 7796314 TC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805520 1 + 74750902 -C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256203 1 - 17725628 -C i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 184782 2 + 608964 TC i otoGar3.GL873829 C 0 I 138 s mm10.chr16 32767215 1 + 98207768 -C i mm10.chr16 C 0 I 1 e proCoq1.NW_012133858v1 14774739 219 - 22200726 I e aotNan1.NW_018492867v1 19117 212 - 21398 I e micMur3.chr1 88364494 190 + 114275543 I e dasNov3.JH569502 2677292 0 - 6579706 C e cebCap1.NW_016107444v1 6344152 0 + 6778120 C e canFam3.chr33 2301030 0 - 31377067 C e manLeu1.NW_012102020v1 1377222 10121 + 1977891 I e cerAty1.NW_012004056v1 16353302 1051 - 16847902 I e rheMac8.chr2 2315522 328 - 204787373 I e nomLeu3.chr11 2801506 0 - 123690457 C a score=9690.000000 s hg38.chr3_KI270934v1_alt 30966 2 + 163458 CC s panTro5.chr3 2493230 2 - 202621043 CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91243 2 - 190779 CC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13799 2 + 55620 CC i gorGor5.CYUI01001831v1 C 0 C 0 s macFas5.chr2 192380853 2 - 192460366 CC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19120387 2 - 19675229 CC i macNem1.NW_012014355v1 C 0 I 324 s chlSab2.chr15 91326568 2 + 91754291 CC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7332372 2 - 7796314 CC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805521 2 + 74750902 CC i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 17256204 2 - 17725628 CC i saiBol1.JH378146 C 0 I 1 s mm10.chr16 32767217 2 + 98207768 CT i mm10.chr16 I 1 C 0 e proCoq1.NW_012133858v1 14774739 219 - 22200726 I e aotNan1.NW_018492867v1 19117 212 - 21398 I e micMur3.chr1 88364494 190 + 114275543 I e dasNov3.JH569502 2677292 0 - 6579706 C e cebCap1.NW_016107444v1 6344152 0 + 6778120 C e canFam3.chr33 2301030 0 - 31377067 C e otoGar3.GL873829 184784 138 + 608964 I e manLeu1.NW_012102020v1 1377222 10121 + 1977891 I e cerAty1.NW_012004056v1 16353302 1051 - 16847902 I e rheMac8.chr2 2315522 328 - 204787373 I e nomLeu3.chr11 2801506 0 - 123690457 C a score=4316.000000 s hg38.chr3_KI270934v1_alt 30968 4 + 163458 AGTC s panTro5.chr3 2493232 4 - 202621043 AGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91245 4 - 190779 AGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13801 4 + 55620 AGTC i gorGor5.CYUI01001831v1 C 0 C 0 s macFas5.chr2 192380855 1 - 192460366 ---C i macFas5.chr2 C 0 I 3 s chlSab2.chr15 91326570 1 + 91754291 ---C i chlSab2.chr15 C 0 I 3 s colAng1.NW_012118932v1 7332374 2 - 7796314 --CC i colAng1.NW_012118932v1 C 0 I 2 s calJac3.chr17 73805524 4 + 74750902 ATCT i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17256207 4 - 17725628 AGCC i saiBol1.JH378146 I 1 C 0 s mm10.chr16 32767219 4 + 98207768 AGCC i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14774739 219 - 22200726 I e aotNan1.NW_018492867v1 19117 212 - 21398 I e micMur3.chr1 88364494 190 + 114275543 I e dasNov3.JH569502 2677292 0 - 6579706 C e macNem1.NW_012014355v1 19120389 324 - 19675229 I e cebCap1.NW_016107444v1 6344152 0 + 6778120 C e canFam3.chr33 2301030 0 - 31377067 C e otoGar3.GL873829 184784 138 + 608964 I e manLeu1.NW_012102020v1 1377222 10121 + 1977891 I e cerAty1.NW_012004056v1 16353302 1051 - 16847902 I e rheMac8.chr2 2315522 328 - 204787373 I e nomLeu3.chr11 2801506 0 - 123690457 C a score=37777.000000 s hg38.chr3_KI270934v1_alt 30972 16 + 163458 GACTGCAGTGAGGAAC s panTro5.chr3 2493236 16 - 202621043 GACTGCAGTGAGGAAC i panTro5.chr3 C 0 I 103 s panPan2.chrUn_NW_014024201v1 91249 16 - 190779 GACTGCAGTGAGGAAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13805 16 + 55620 TACTGCAGTGAGGAAC i gorGor5.CYUI01001831v1 C 0 I 52 s macFas5.chr2 192380859 16 - 192460366 GACTACAGTGAGGAAT i macFas5.chr2 I 3 C 0 s chlSab2.chr15 91326574 16 + 91754291 GACTACAGTGAGGAAT i chlSab2.chr15 I 3 C 0 s manLeu1.NW_012102020v1 1387343 16 + 1977891 GACTACAGTGAGGAAT i manLeu1.NW_012102020v1 I 10121 C 0 s colAng1.NW_012118932v1 7332378 16 - 7796314 GACTACAGTGAGGAAT i colAng1.NW_012118932v1 I 2 C 0 s calJac3.chr17 73805528 16 + 74750902 GACTGCAGTGAGGAAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256211 7 - 17725628 AACTGCA--------- i saiBol1.JH378146 C 0 C 0 s mm10.chr16 32767223 11 + 98207768 AACTAAGATGG----- i mm10.chr16 C 0 C 0 s canFam3.chr33 2301030 13 - 31377067 ---GGCCGTGGGGGGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2677292 3 - 6579706 GAC------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774739 219 - 22200726 I e aotNan1.NW_018492867v1 19117 212 - 21398 I e micMur3.chr1 88364494 190 + 114275543 I e macNem1.NW_012014355v1 19120389 324 - 19675229 I e cebCap1.NW_016107444v1 6344152 0 + 6778120 C e otoGar3.GL873829 184784 138 + 608964 I e cerAty1.NW_012004056v1 16353302 1051 - 16847902 I e rheMac8.chr2 2315522 328 - 204787373 I e nomLeu3.chr11 2801506 0 - 123690457 C a score=7480.000000 s hg38.chr3_KI270934v1_alt 30988 4 + 163458 CTCA s panTro5.chr3 2493355 4 - 202621043 CTCA i panTro5.chr3 I 103 C 0 s panPan2.chrUn_NW_014024201v1 91265 4 - 190779 CTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13873 4 + 55620 CTCA i gorGor5.CYUI01001831v1 I 52 C 0 s macFas5.chr2 192380875 4 - 192460366 CCCA i macFas5.chr2 C 0 I 151 s chlSab2.chr15 91326590 4 + 91754291 CCCA i chlSab2.chr15 C 0 I 1 s manLeu1.NW_012102020v1 1387359 4 + 1977891 CTCA i manLeu1.NW_012102020v1 C 0 I 1 s colAng1.NW_012118932v1 7332394 4 - 7796314 CCCA i colAng1.NW_012118932v1 C 0 I 1 s calJac3.chr17 73805544 4 + 74750902 CTCA i calJac3.chr17 C 0 I 1 s canFam3.chr33 2301043 1 - 31377067 -T-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2677295 4 - 6579706 TCTA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774739 219 - 22200726 I e mm10.chr16 32767234 0 + 98207768 C e aotNan1.NW_018492867v1 19117 212 - 21398 I e micMur3.chr1 88364494 190 + 114275543 I e macNem1.NW_012014355v1 19120389 324 - 19675229 I e saiBol1.JH378146 17256218 0 - 17725628 C e cebCap1.NW_016107444v1 6344152 0 + 6778120 C e otoGar3.GL873829 184784 138 + 608964 I e cerAty1.NW_012004056v1 16353302 1051 - 16847902 I e rheMac8.chr2 2315522 328 - 204787373 I e nomLeu3.chr11 2801506 0 - 123690457 C a score=6540.000000 s hg38.chr3_KI270934v1_alt 30992 4 + 163458 -CCCT s panTro5.chr3 2493359 4 - 202621043 -CCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91269 4 - 190779 -CCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13877 4 + 55620 -CCCT i gorGor5.CYUI01001831v1 C 0 C 0 s macFas5.chr2 192381030 4 - 192460366 -CCCT i macFas5.chr2 I 151 C 0 s chlSab2.chr15 91326595 4 + 91754291 -CCCT i chlSab2.chr15 I 1 C 0 s manLeu1.NW_012102020v1 1387364 4 + 1977891 -CCCT i manLeu1.NW_012102020v1 I 1 C 0 s colAng1.NW_012118932v1 7332399 4 - 7796314 -CCCT i colAng1.NW_012118932v1 I 1 C 0 s calJac3.chr17 73805549 3 + 74750902 -CCC- i calJac3.chr17 I 1 T 51 s dasNov3.JH569502 2677299 4 - 6579706 GCTT- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774739 219 - 22200726 I e mm10.chr16 32767234 0 + 98207768 C e aotNan1.NW_018492867v1 19117 212 - 21398 I e micMur3.chr1 88364494 190 + 114275543 I e macNem1.NW_012014355v1 19120389 324 - 19675229 I e saiBol1.JH378146 17256218 0 - 17725628 C e cebCap1.NW_016107444v1 6344152 0 + 6778120 C e canFam3.chr33 2301044 0 - 31377067 C e otoGar3.GL873829 184784 138 + 608964 I e cerAty1.NW_012004056v1 16353302 1051 - 16847902 I e rheMac8.chr2 2315522 328 - 204787373 I e nomLeu3.chr11 2801506 0 - 123690457 C a score=31600.000000 s hg38.chr3_KI270934v1_alt 30996 11 + 163458 GAGTCCTCCTG s panTro5.chr3 2493363 11 - 202621043 GAGTCCTCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91273 11 - 190779 GAGTCCTGCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13881 11 + 55620 GAGTCCTCCTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801506 2 - 123690457 ---------TG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192381034 11 - 192460366 GAGTCCACCTG i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91326599 11 + 91754291 GAGTCCACCTG i chlSab2.chr15 C 0 I 314 s manLeu1.NW_012102020v1 1387368 11 + 1977891 GAGTCCTCCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7332403 10 - 7796314 GAGTCTTCCT- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805501 11 + 74750902 GAGTCCACCTG i calJac3.chr17 T 51 C 0 s cebCap1.NW_016107444v1 6344152 11 + 6778120 GAGTCCACCGG i cebCap1.NW_016107444v1 C 0 C 0 s mm10.chr16 32767234 7 + 98207768 AAGTCCT---- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2677303 11 - 6579706 GAGTCTAATAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774739 219 - 22200726 I e aotNan1.NW_018492867v1 19117 212 - 21398 I e micMur3.chr1 88364494 190 + 114275543 I e macNem1.NW_012014355v1 19120389 324 - 19675229 I e saiBol1.JH378146 17256218 0 - 17725628 C e canFam3.chr33 2301044 0 - 31377067 C e otoGar3.GL873829 184784 138 + 608964 I e cerAty1.NW_012004056v1 16353302 1051 - 16847902 I e rheMac8.chr2 2315522 328 - 204787373 I a score=5761.000000 s hg38.chr3_KI270934v1_alt 31007 16 + 163458 ----GACAAGTGCCGCACC-T s panTro5.chr3 2493374 16 - 202621043 ----GACAAGTGCCGCACC-T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91284 16 - 190779 ----GGCAAGTGCCGCACC-T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13892 16 + 55620 ----GACAAGTGCCGCACC-T i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801508 16 - 123690457 ----GACAAGTGCCGCACC-T i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192381045 14 - 192460366 -----ACAGGTGCCCCCCG-- i macFas5.chr2 C 0 C 0 s manLeu1.NW_012102020v1 1387379 14 + 1977891 -----ACAGGTGCCCCCCT-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7332413 16 - 7796314 ----GACAAGTGTCCCCCCT- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805512 16 + 74750902 ----GACAAGTGCCCTATC-T i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 6344163 16 + 6778120 ----GACAAGTGCCCTATC-T i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 184922 16 + 608964 ----AACAAATGTCCTGCC-T i otoGar3.GL873829 I 138 C 0 s mm10.chr16 32767241 5 + 98207768 ----------TACCT------ i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2677314 16 - 6579706 GTCAGATGTATGCCTG----- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774739 219 - 22200726 I e aotNan1.NW_018492867v1 19117 212 - 21398 I e micMur3.chr1 88364494 190 + 114275543 I e macNem1.NW_012014355v1 19120389 324 - 19675229 I e saiBol1.JH378146 17256218 0 - 17725628 C e canFam3.chr33 2301044 0 - 31377067 C e chlSab2.chr15 91326610 314 + 91754291 I e cerAty1.NW_012004056v1 16353302 1051 - 16847902 I e rheMac8.chr2 2315522 328 - 204787373 I a score=149742.000000 s hg38.chr3_KI270934v1_alt 31023 23 + 163458 GACT--GCAGTGAGGAACCTCAGCC s panTro5.chr3 2493390 23 - 202621043 GCCT--GCAGTGAGGAACCTCAGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91300 23 - 190779 GACT--GCAGTGAGGAACCTCAGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13908 23 + 55620 GACT--GCAGTGAGGAACCTCAGCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801524 23 - 123690457 GACT--GCAGTGAGGAATCTCAGCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192381059 23 - 192460366 GACT--GCAGTGAGGAATCTCAGCC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16354353 23 - 16847902 GACT--GCAGTGAGGAATCCCAGCC i cerAty1.NW_012004056v1 I 1051 C 0 s chlSab2.chr15 91326924 23 + 91754291 GACT--GCAGTGAGGAATCTCAGCC i chlSab2.chr15 I 314 C 0 s manLeu1.NW_012102020v1 1387393 23 + 1977891 GACT--GCAGTGAGGAATCTCAGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7332429 23 - 7796314 GACT--ACAGTGAGGAATCTCAGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805528 23 + 74750902 GACT--GCAGTGAGGAATCTCAGCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256218 16 - 17725628 ---------GCAGGGAATCTCAGCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6344179 23 + 6778120 GACT--GCAGCAGGGAATCTCAGCC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 184938 23 + 608964 -GCTGGGCAG-GGGCAATCTTAGAC i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32767246 23 + 98207768 GCTG--GGAGTAAGAGTCCATGGCC i mm10.chr16 C 0 C 0 s canFam3.chr33 2301044 13 - 31377067 ------------GGGATCCGCACCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2677330 23 - 6579706 GGAG--GTGGTGGGAAATCTCAGCT i dasNov3.JH569502 C 0 I 1 e proCoq1.NW_012133858v1 14774739 219 - 22200726 I e aotNan1.NW_018492867v1 19117 212 - 21398 I e micMur3.chr1 88364494 190 + 114275543 I e macNem1.NW_012014355v1 19120389 324 - 19675229 I e rheMac8.chr2 2315522 328 - 204787373 I a score=184.000000 s hg38.chr3_KI270934v1_alt 31046 2 + 163458 CT s panTro5.chr3 2493413 2 - 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91323 2 - 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13931 2 + 55620 CT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801547 2 - 123690457 CT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192381082 2 - 192460366 GG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16354376 2 - 16847902 GG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326947 2 + 91754291 GG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1387416 2 + 1977891 CT i manLeu1.NW_012102020v1 C 0 I 171 s colAng1.NW_012118932v1 7332452 2 - 7796314 CT i colAng1.NW_012118932v1 C 0 I 202 s calJac3.chr17 73805551 2 + 74750902 CA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256234 2 - 17725628 CG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6344202 2 + 6778120 CA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88364684 2 + 114275543 CT i micMur3.chr1 I 190 C 0 s otoGar3.GL873829 184962 2 + 608964 CT i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32767269 2 + 98207768 CT i mm10.chr16 C 0 I 1 s canFam3.chr33 2301057 2 - 31377067 CG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2677354 2 - 6579706 TT i dasNov3.JH569502 I 1 C 0 e proCoq1.NW_012133858v1 14774739 219 - 22200726 I e aotNan1.NW_018492867v1 19117 212 - 21398 I e macNem1.NW_012014355v1 19120389 324 - 19675229 I e rheMac8.chr2 2315522 328 - 204787373 I a score=18947.000000 s hg38.chr3_KI270934v1_alt 31048 8 + 163458 ACACATGA s panTro5.chr3 2493415 8 - 202621043 ACACATGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91325 8 - 190779 ACACATGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13933 8 + 55620 ACGCATGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801549 8 - 123690457 ACGCATGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192381084 8 - 192460366 GCACTTGG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16354378 8 - 16847902 GCACTTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326949 8 + 91754291 GCACTTGG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7332656 8 - 7796314 GCGCTTGG i colAng1.NW_012118932v1 I 202 C 0 s calJac3.chr17 73805553 8 + 74750902 ACCCATGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256236 8 - 17725628 ACCCATGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6344204 8 + 6778120 ACCCATGG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88364686 8 + 114275543 ACCCATGG i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 184964 8 + 608964 ACCTGCAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32767272 1 + 98207768 A------- i mm10.chr16 I 1 C 0 s canFam3.chr33 2301059 3 - 31377067 --CCA--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2677356 8 - 6579706 ACTTCTGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774739 219 - 22200726 I e aotNan1.NW_018492867v1 19117 212 - 21398 I e macNem1.NW_012014355v1 19120389 324 - 19675229 I e manLeu1.NW_012102020v1 1387418 171 + 1977891 I e rheMac8.chr2 2315522 328 - 204787373 I a score=60828.000000 s hg38.chr3_KI270934v1_alt 31056 7 + 163458 TTTGTCA s panTro5.chr3 2493423 7 - 202621043 TTTGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91333 7 - 190779 TTTGTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13941 7 + 55620 TTTGTCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801557 7 - 123690457 TTTGTCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192381092 7 - 192460366 TTTGTCA i macFas5.chr2 C 0 I 17 s cerAty1.NW_012004056v1 16354386 7 - 16847902 TTTGTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326957 7 + 91754291 TTTGTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1387589 7 + 1977891 TTTGTCA i manLeu1.NW_012102020v1 I 171 C 0 s colAng1.NW_012118932v1 7332664 7 - 7796314 TTTGTCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805561 7 + 74750902 TGTGTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256244 7 - 17725628 TGTGTCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6344212 7 + 6778120 TGTGTCA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88364694 7 + 114275543 TTTGCCA i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 184972 7 + 608964 TTTGCCG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32767273 5 + 98207768 -TTGGC- i mm10.chr16 C 0 C 0 s canFam3.chr33 2301062 4 - 31377067 ---GCCG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2677364 7 - 6579706 TTTGCCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774739 219 - 22200726 I e aotNan1.NW_018492867v1 19117 212 - 21398 I e macNem1.NW_012014355v1 19120389 324 - 19675229 I e rheMac8.chr2 2315522 328 - 204787373 I a score=186297.000000 s hg38.chr3_KI270934v1_alt 31063 18 + 163458 TGCTGAGGCAGCATCTCT s panTro5.chr3 2493430 18 - 202621043 TGCTGAGGCGGCATCTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91340 18 - 190779 TGCTGAGGCGGCATCTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13948 18 + 55620 TGCTAAGGCGGCATCTCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801564 18 - 123690457 TGCTGAGGCGGCATCTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2315850 18 - 204787373 TGCTGAGGCGGCATCTCT i rheMac8.chr2 I 328 C 0 s macFas5.chr2 192381116 18 - 192460366 TGCTGAGGTGGCATCTCT i macFas5.chr2 I 17 C 0 s macNem1.NW_012014355v1 19120713 18 - 19675229 TGCTGAGGCGGCATCTCT i macNem1.NW_012014355v1 I 324 C 0 s cerAty1.NW_012004056v1 16354393 18 - 16847902 TGCTGAGGCGGCATCTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326964 18 + 91754291 TGCTGAGGCAGCATCTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1387596 18 + 1977891 TGCTGAGGCGGCATCTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7332671 18 - 7796314 TGCTGAGGCGGCATCTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805568 18 + 74750902 TGCTGATGTGGTATCTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256251 18 - 17725628 TGCTGATGTGCTACCTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6344219 18 + 6778120 TGCTGATGTGGTATCTCT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88364701 18 + 114275543 TGCTAATGCAGTATCTCC i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 184979 18 + 608964 GGCTAATGAGGTATCTCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32767278 12 + 98207768 ---TAGCATGTAACC--- i mm10.chr16 C 0 I 2 s canFam3.chr33 2301066 18 - 31377067 CGCCAGCGTGGCCTCTCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2677371 18 - 6579706 TGCCAATGCGTAACACCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774739 219 - 22200726 I e aotNan1.NW_018492867v1 19117 212 - 21398 I a score=33909.000000 s hg38.chr3_KI270934v1_alt 31081 7 + 163458 TTTTTCC s panTro5.chr3 2493448 7 - 202621043 TTTTTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91358 7 - 190779 TTTTTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13966 7 + 55620 TTTTTCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801582 7 - 123690457 TTTTTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2315868 5 - 204787373 TTTTT-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192381134 5 - 192460366 TTTTT-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19120731 5 - 19675229 TTTTT-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16354411 7 - 16847902 TTTTTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326982 7 + 91754291 TTTTTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1387614 6 + 1977891 TTTTT-T i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7332689 7 - 7796314 TTCTTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805586 7 + 74750902 TTTTTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256269 7 - 17725628 TTTTTCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6344237 7 + 6778120 GTTTTCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19329 7 - 21398 TTTTTCC i aotNan1.NW_018492867v1 I 212 C 0 s micMur3.chr1 88364719 5 + 114275543 TTTTC-- i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 184997 5 + 608964 ATTTG-- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32767292 5 + 98207768 CTTTC-- i mm10.chr16 I 2 C 0 s canFam3.chr33 2301084 4 - 31377067 -TTTC-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2677389 7 - 6579706 TTTTTCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14774739 219 - 22200726 I a score=4092611.000000 s hg38.chr3_KI270934v1_alt 31088 220 + 163458 TTCCAGCCTGGATGTTCGGGGACCCCCACATCACCACCTTGGATGGTGTCAGTTACACCTTCAATGGGCTGGGGGACTTCCTGCTGGTCGGGGCCCAAGACGGGAACTCCTCCTTCCTGCTTCAGGGCCGCACCGCCCAGACTGGCTCAGCCCAGGCCACCAACTTCATCGCCTTTGCGGCTCAGTACCGCTCCAGCAGCCTGGG---CCCCGTCACGGTGAG s panTro5.chr3 2493455 220 - 202621043 TTCCAGCCTGGATGTTCGGGGACCCCCACATCACCACCTTGGATGGTGTCAGTTACACCTTCAATGGGCTGGGAGACTTCCTGCTGGTCGGGGCCCAAGACGGGAACTCCTCCTTCCTGCTTCAGGGCCGCACCGCCCAGACTGGCTCAGCCCAGGCCACCAACTTCATCGCCTTTGCGGCTCAGTACCGCTCCAGCAGCCTGGG---CCCCGTCACGGTGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91365 220 - 190779 TTCCAGCCTGGATGTTTGGGGACCCCCACATCACCACCTTGGATGGTGTCAGTTACACCTTCAATGGGCTGGGAGACTTCCTGCTGGTCGGGGCCCAAGACGGGAACTCCTCCTTCCTGCTTCAGGGCCGCACCGCCCAGACTGGCTCAGCCCAGGCCACCAACTTCATCGCCTTTGCGGCTCAGTACCGCTCCAGCAGCCTGGG---CCCCGTCACGGTGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 13973 220 + 55620 TTCCAGCCTGGATGTTCGGGGACCCCCACATCACCACCTTGGATGGTGTCAGTTACACCTTCAATGGGCTGGGGGACTTCCTGCTGGTTGGGGCCCAGGACGGGAACTCCTCCTTCCTGCTTCAGGGCCGCACCGCCCAGACTGGCTCAGCCCAGGCCACCAACTTCATCGCCTTTGCAGCTCAGTACCGCTCCAGCAGTCTGGG---CCCCGTCACGGTGAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801589 220 - 123690457 TTCCAGCCTGGATGTTCGGGGACCCCCACATTACCACCTTGGATGGTGTCAATTACACCTTCAATGGGCTGGGGGACTTCCTGCTGGTGGGGGCCCAGGACGGGAACTCCTCCTTCCTGCTGCAGGGCCGCACCGCCCAGACTGGCTCAGCCCAGGCCACCAACTTCATCGCCTTTGCGGCTCGGTACCGCTCCAGCAGCCTGGG---CCCCGTCACGGTGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2315873 220 - 204787373 CCCCAGCCTGGATGTTCGGGGACCCCCACATCACCACCTTGGATGGTGTCAATTACACCTTCAATGGGCTGGGGGACTTCCTGCTGGTCGGGGCCCAGGACGGGAACTCCTCCTTCCTGCTGCAGGGCCGCACGGCCCAGACTGGCTCAGCCCAGGCCACCAACTTCATCGCCTTTGCGGCTCAGTACCGCTCTGGCAGCCTGGG---CCCCGTGACGGTGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192381139 220 - 192460366 CCCCAGCCTGGATGTTCGGGGACCCCCACATCACCACCTTGGATGGTGTCAATTACACCTTCAATGGGCTGGGAGACTTCCTGCTGGTCGGGGCCCAGGACGGGAACTCCTCCTTCCTGCTGCAGGGCCGCACGGCCCAGACTGGCTCAGCCCAGGCCACCAACTTCATCGCCTTTGCGGCTCAGTACCGCTCTGGCAGCCTGGG---CCCCGTGACGGTGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19120736 220 - 19675229 CCCCAGCCTGGATGTTCGGGGACCCCCACATCACCACCTTGGATGGTGTCAATTACACCTTCAATGGGCTGGGGGACTTCCTGCTGGTCGGGGCCCAGGACGGGAACTCCTCCTTCCTGCTGCAGGGCCGCACGGCCCAGACTGGCTCAGCCCAGGCCACCAACTTCATCGCCTTTGCGGCTCAGTACCGCTCTGGCAGCCTGGG---CCCCGTGACGGTGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16354418 220 - 16847902 CCCCAGCCTGGATGTTCGGGGACCCCCACATCACCACCTTGGATGGTGTCAATTACACCTTCAATGGGCTGGGGGACTTCCTGCTGGTCGGGGCCCAGGACGGGAACTCCTCCTTCCTGCTGCAGGGCCGCACGGCCCAGACTGGCTCAGCCCAGGCCACCAACTTCATCGCCTTTGCGGCTCAGTACCGCTCTGGCAGCCTGGA---CCCTGTGACGGTGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91326989 220 + 91754291 CCCCAGCCTGGATGTTCGGGGACCCCCACATCACCACCTTGGATGGTGTCAATTACACCTTCAATGGGCTGGGGGACTTCCTGCTGGTCAGGACCCAGGACGGGAACTCCTCCTTCCTGCTGCAGGGCCGCACCGCCCAGACTGGCTCAGCCCAGGCCACCAACTTCATCGCCTTTGCGGCCCAGTACCGCTCTGGCAGCCTGGG---CCCCGTGACGGTGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1387620 220 + 1977891 CCCCAGCCTGGATGTTCGGGGACCCCCACATCACCACCTTGGATGGTGTCAATTACACCTTCAATGGGCTGGGGGACTTCCTGCTGGTCGGGGCCCAGGACGGGAACTCCTCCTTCCTGCTGCAGGGCCGCACGGCCCAGACTGGCTCAGCCCAGGCCACCAACTTCATCGCCTTTGCGGCTCAGTACCGCTCTGGCAGCCTGGG---CCCCGTGACGGTGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7332696 220 - 7796314 CCCCAGCCTGGATGTTCGGGGACCCCCACATCACCACCTTGGATGGTGTCAATTACACCTTCAATGGCCTGGGGGACTTCCTGCTGGTCGGGGCCCAGGACAGGAACTCCTCCTTCCTGCTGCAGGGCCGCACTGCCCAGACTGGCTCAGCTCAGGCCACCAACTTCATCGCCTTTGCGGCTCAGTACCGCTCTAGCAGCCTGGG---CCCCGTGACGGTGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805593 220 + 74750902 TTCCAGCCTGGATGATCGGGGACCCCCACATCACCACCTTAGACGGTGTGAATTACACCTTCAATGGGCTGGGGGACTTCCTGCTGGTCCAGGCCCAGGACGGGAACTCCTCCTTCCAGCTGCAGGGCCGCACCGCCCAGACCGCCTCAGCCCAGGCCACCAACTTCGTTGCCTTTGCTGCTCAGTACCGCTCCAGCAGCCTGGG---CCCCGTCACGGTTCG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256276 220 - 17725628 TTCCAGCCTGGATGTTCGGGGACCCCCACATCACCACCTTGGACGGTGTGAATTACACCTTCAATGGACTGGGGGACTTCCTGCTGGTCCAGGCCCAGGACGGGAACTCCTCCTTCCAGCTGCAGGGCCGCACCGCCCAGACGGGCTCAGCCCAGGCCACCAACTTCATCGCCTTTGCCGCTCAGTACCGCTCCAGCAGCCTGGA---ACCCGTCACGGTGCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6344244 220 + 6778120 TTTCAGCCTGGATGTTCGGGGACCCCCACATCACCACCTTGGACGGTGTGAATTACACCTTCAATGGGCTGGGGGACTTCCTGCTGGTCCAGGCCCAGGACGGGAACTCCTCCTTCCAGCTGCAGGGCCGCACCACCCAGACCGGCTCAGCCCAGGCCACCAACTTCATTGCCTTTGCCGCTCAGTACCGCTCCAGCAGCCTGGG---GCCCGTCACGGTGCG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19336 217 - 21398 TTCCAGCCTGGATGTTCGGGGACCCCAACATCACCACCTTGGACGGTGTGAATTACACCTTCAATGGGCTGGGGGACTTCCTGCTGGTCCAGGCCCAGGA-GGGAACTCCTCCTTCCAGCTGCAGGGCCGAGCCGCCCAGACCGGCTCAGCCCA-GCCACCAACTTCATTGCCTTTGCCGCGCAGTACCACTCCAGCAGCCTGGG---CCCCGTCAC-GTTCG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88364724 220 + 114275543 TTCCAGCCTGGCTGTTTGGGGACCCCCACATCACTACTTTGGATGGTGTCAATTACACCTTCAATGGGCTGGGGGACTTCCTGCTGGTCCGGGCCTGGGATGGAAACTCCTCCTTCCTGCTGCAGGGCCGCACTGCCCAGATGGGCTCTGTCCAGGCCACCAACTTCATTGCCTTTGCAGCTCAGTACCACTCCAGCAGCCTGGG---CCCCATCACAGTGAG i micMur3.chr1 C 0 I 463 s proCoq1.NW_012133858v1 14774958 220 - 22200726 TTCTAGCCTGGATGTTTGGGGACCCCCACATCACTACCTTGGATGGTGCCAATTACACCTTCAATGGGCTGGGGGACTTCCTGCTCGTCAGGGCCTGGGACAGAAACTCCTCCTTCCTGCTGCAGGGCCGCACTGCCCAGACGGGCTCAGTCCAGGCCACCAACTTCATTGCCTTTGCGGCTCAGTACCACTCCAGCAGCCTGGG---CCCCATCGCGGTGAG i proCoq1.NW_012133858v1 I 219 C 0 s otoGar3.GL873829 185002 220 + 608964 TTTCAGCTTGGATGTTTGGGGACCCTCACATCACTACCATGGATGGCACCAATTATACCTTCAATGGGCTGGGGGACTTCCTGCTGGTCCGGGCCTGGGACAGAAACTCGTCCTTCCTGCTGGAGGGCCGCACTGCTCAGACAGGCTCAGCCCAGGCCACCAACTTCATTGCCTTTGCAGCTCAATACAACTCCAGCAGCCTGGG---CTCCATCACAGTGAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32767297 223 + 98207768 TTTTAGCTTGGACATTTGGTGATCCCCACATCACCACTTTGGATAATGCCAACTTCACCTTCAACGGGCTGGGAGACTTTCTGCTGGTCCAGGCCCAGGACAGAAATTCTTCCTTCCTGCTGGAAGGCCGCACTGCCCAGACTGGCACTGCCAAGGCCACTAACTTCATTGCCTTTGCGGCTCAATACAACACCAGCAGCCTGAAGTCTCCCATCACGGTAAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2301088 220 - 31377067 TTCCAGCCTGGATGTTTGGGGACCCCCACATCACCACCTTGGACGGTGCCAATTACACGTTCAATGGGCTGGGTGACTTCCAGCTGGTCCGGGCCTGGGACGGAAACTCCTCCTTCCTGCTGCTGGGTCGCACCGCCCAGACCGGCTCCGCCCGGGCCACCAACTTCATTGCCTTTGCAGCGAGCTATGAGGCCCGCAGCCTGAG---CCCCGTCACGGTGAG i canFam3.chr33 C 0 I 43 s dasNov3.JH569502 2677396 216 - 6579706 ----AGCCTGGATGTTTGGGGACCCCCACTTCACTACCTTGGATGGTGCCAATTTCACCTTCAATGGGCTGGGGGACTTCCTGCTGGTCCGGGCCTGGGACAGAAATTCTTCCTTCCTGCTGCTGGGCCGCACTGCCCAGACTGGCTCAGCCAAGGCTACCAACTTCATCGCCTTTGCTGCTCAATACAACTCCAGCCACCTGGG---GCCCATCACAGTGAG i dasNov3.JH569502 C 0 C 0 a score=115271.000000 s hg38.chr3_KI270934v1_alt 31308 7 + 163458 TGAGGGG- s panTro5.chr3 2493675 7 - 202621043 TGAGGGG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91585 7 - 190779 TGAGGGG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14193 7 + 55620 TGAGGGG- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801809 7 - 123690457 TGAGGGG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316093 7 - 204787373 TGAGGGG- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192381359 7 - 192460366 TGAGGGG- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19120956 7 - 19675229 TGAGGGG- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16354638 7 - 16847902 TGAGGGG- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91327209 7 + 91754291 TGAGGGG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1387840 7 + 1977891 TGAGGGG- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7332916 7 - 7796314 TGAGGGG- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805813 7 + 74750902 TGAGGGG- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256496 7 - 17725628 TGAGGGA- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6344464 7 + 6778120 TGAGGGG- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19553 7 - 21398 TGAGGGG- i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 14775178 7 - 22200726 CAAGGGG- i proCoq1.NW_012133858v1 C 0 I 454 s otoGar3.GL873829 185222 7 + 608964 TGGGGGG- i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32767520 7 + 98207768 TGAGGGG- i mm10.chr16 C 0 C 0 s canFam3.chr33 2301351 7 - 31377067 GGAGGGG- i canFam3.chr33 I 43 I 1 s dasNov3.JH569502 2677612 8 - 6579706 TGAGAAGA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88364944 463 + 114275543 I a score=543328.000000 s hg38.chr3_KI270934v1_alt 31315 83 + 163458 TGCCGGGA---------ACCT----------CCCTG----------CATTCCA-----------CCCACAGG-----GACCTTCAGCCACATACT--------GAGGCCGAGGAGAa----------------------------------------------------------ggaagagagcgaaggaggg-------------------- s panTro5.chr3 2493682 83 - 202621043 CGCCGGGG---------ACCT----------CCCTG----------CATTCCA-----------CCCACAGG-----GACCTTCGGCCACATACT--------GAGGCCGAGGAGAa----------------------------------------------------------ggaagagagcgaaggaggg-------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91592 83 - 190779 CGCCGGGG---------ACCT----------CCCTG----------CATTCCA-----------CCCACAGG-----GACCTTCAGCCACATACT--------GAGGCCGAGGAGAa----------------------------------------------------------ggaagagagcgaaggaggg-------------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14200 83 + 55620 CGCCGGGG---------ACCT----------CCCTG----------CATTCCA-----------CCCACAGG-----GACCTTCAACCACATACT--------GAGGCCGAGGAGAA----------------------------------------------------------GGAAGAGAGCGAAGGAGGG-------------------- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801816 83 - 123690457 CGCCAGGG---------ACCT----------CCCTG----------CCTTCCA-----------CCCACAGG-----GACCTTCCGCCACATACT--------GAGGCCGgggagaa----------------------------------------------------------ggaagagagcgaagaaggg-------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316100 82 - 204787373 CG-CGGGG---------ACCT----------CCCTG----------CATTGCA-----------TCCACAGG-----GACCTTCAGCCACACACT--------GAGGCTGAGGAGAA----------------------------------------------------------GGAAGACAGCGAAGAAGAG-------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192381366 82 - 192460366 CG-CGGGG---------ACCT----------CCCTG----------CATTGCA-----------TCCACAGG-----GACCTTCAGCCACACACT--------GAGGCTGAGGAGAA----------------------------------------------------------GGAAGACAGCGAAGAAGAG-------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19120963 82 - 19675229 CG-CGGGG---------ACCT----------CCCTG----------CATTGCA-----------TCCACAGG-----GACCTTCAGCCACACACT--------GAGGCTGAGGAGAA----------------------------------------------------------GGAAGACAGCGAAGAAGAG-------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16354645 81 - 16847902 CG-CGGGG---------ACCT----------CCCTG----------CATTGCA-----------TCCACAGG-----GACCTTCAGCCACACACT--------GAGGCTGAGGAGAA----------------------------------------------------------GGAAGACAGCGAAGAAGA--------------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91327216 53 + 91754291 CG-CG-----------------------------------------------------------------GG-----GACCTTCAGCCACATACT--------GAGGCTGAGGAGAA----------------------------------------------------------GGAAGACAGC---GAAGA--------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1387847 81 + 1977891 CG-CGGGG---------ACCT----------CCCTG----------CATTGCA-----------TGCACAGG-----GACCTTCAGCCACACACT--------GAGGCTAAGGAGAA----------------------------------------------------------GGAAGACAGCGAAGAAGA--------------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7332923 82 - 7796314 CG-CGGGG---------TCCT----------CCCTG----------CATTCCA-----------TCCACAGG-----GACCTTCAGCCACATACT--------GAGGCTGAGGAGAA----------------------------------------------------------GGAAGACAGCGAAGAAGAG-------------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805820 87 + 74750902 CACCTGGG---------ACCT-----------CCTG----------CATTTCA-----------CCCACAGGCATTTCACCTTCAGCCGGATATT--------GAGGCCCAGGAGAA----------------------------------------------------------GGAAGAGGAGAAAGAAGGG-------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256503 80 - 17725628 -GCCTGGG---------ACCT-----------CCTG----------CATCTCA------------CCACAGG-----CACCTTCAGCCGGATACT--------GAGGCCCAGGAGAA----------------------------------------------------------GGAAGAGGAGAAAGAAGGG-------------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6344471 78 + 6778120 CGCCGGGG---------ACCT-----------CCTG----------CATCTCA------------CCACGGG-----CACCTCCAGCTGGATATT--------GAGGCCC---AGAA----------------------------------------------------------GGAAGAGGAGAAAGAAGGG-------------------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19560 80 - 21398 CGCCTGGG---------ACCT-----------CCTG----------CATTTCA-----------CCCACAGG-----CAC--TCGCCCGGATATT--------GAGACCCAGGAGAA----------------------------------------------------------GGAAGAGGAGAAAGAAGGC-------------------- i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 185230 91 + 608964 CACCCAGG---------ACCC-----------CCTG----------CGTCCCTG--CAGAGAGCCCAACAGG-----GAACTTCAGCTAGAAATT--------GAGGTGCAGGAAGA----------------------------------------------------------GGAAAAGAACACAGAAAGG-------------------- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32767527 86 + 98207768 TACCTAGG---------GTAT----------CCTTG----------CAATCCCTTCCCCAGAACCCCTTAGA-----GACCGTCAGCTGGACACT--------G--------GAAAA----------------------------------------------------------GGAAGAGTACAAAGAAAGG-------------------- i mm10.chr16 C 0 I 1009 s canFam3.chr33 2301359 162 - 31377067 TGCCGGGGGCGGGGGACACCTCGAGAGTCGACCCTATGAACGGTGCCAtttgg-----------gtcat-gg-----ctccatcagccg-----t--------gtgatcctggaggaactactgaccttccagtgcctcacttttcttttcttaagattttatttatttattcatgagagacacagagagag---------------------- i canFam3.chr33 I 1 I 4 s dasNov3.JH569502 2677620 108 - 6579706 AGCCCAAG---------ACAT----------CCCTG----------CACCTC------------CCCATAGG-----GAG--TCAGTTAGGGACCTGCAGTTGGAGGCCCaagagga----------------------------------------------------------agaagagaacaaggaagaggatagggagaagaagaaggg i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14775185 454 - 22200726 I e micMur3.chr1 88364944 463 + 114275543 I a score=2758692.000000 s hg38.chr3_KI270934v1_alt 31398 324 + 163458 gaagcc------gggcaggagggagggaggACACA-GCCCATCCACGCAGCTGTCC-----CGGAGTAAATCCTGGGGATGGtgga-ttagggctctggccccacggtttcccagctgcttggcttcgaagaaactac----------t------taatttgg--------ttttctcctagtaagaatgggg---atgacattac--ctgcctca-c-gggctgttgtaagagctaaagggcataatccgaaaaccatgc--------ctgg------------ccc-tgccgagc----acacggtagac-gGCGGCTGGCATCACCTCA-GGCCGCGGCCTCCAGCGCCTTCCTCCCGGCCCAGGGCGCAGCTTCCAGCCCCAGGG---GCTCTC s panTro5.chr3 2493765 324 - 202621043 gaagcc------gggcaggagggagggaggACACA-GCCCATCCACGCAGCTGTCC-----GGGAGTAAATCCTGGGGATGGtgga-ttagggctctggccccacggtttcccagctgcttggcttcgaagaaactac----------t------taacttgg--------ttttctcctagtaagaatgggg---atgacattac--ctgcctca-c-gggctgttgtaagagctaaagggcataatccgaaaaccatgc--------ctgg------------ccc-tgccgagc----acgcggtagac-gGCGGCTGGCATCACCTCG-GGCCGCGGCCTCCAGCGCCTTCCTCCCGGCCCAGGGCGCAGCTTCCAGCCCCAGGG---GCTCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91675 324 - 190779 gaagcc------gggcaggagggagggaggACACA-GCCCATCCAGGCAGCTGTCC-----CGGAGTAAATCCTGGGGATGGtgga-ttagggctctggccccacggtttcccagctgcttggcttcgaagaaactac----------t------taacttgg--------ttttctcctagtaagaatgggg---atgacattac--ctgcctca-c-gggatgttgtaagagctaaagggcataatccgaaaaccatgc--------ctgg------------ccc-tgccgagc----acgcggtagac-gGCGGCTGGCATCACCTCG-GGCCGCGGCCTCCAGCGCCTTCCTCCCGGCCCAGGGCGCAGCTTCCAGCCCCAGGG---GCTCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14283 322 + 55620 GAAGCT------GGGCAGGAGAGAGGGAGGACACA-GCCCATCCACGCAGCTGTCC-----CGGAGTAAATCCTGGGGATGGtgga-ttagggctctggccccacggtttcccagctgcttggcttcgaagaaactac----------t------taacttgg--------ttttctcctagt-aggatgggg---atgacattac--ctgcctca---gggctgttgtaagagctaaagggcataatccgaaaaccatgc--------ctgg------------ccc-tgccgagc----acacggtagac-gGCGGCTGGCATCACCTCG-GGCCGCGGTCTCCAGCGCCTTCCTCCCGGCCCAGGGCGCAGCTTCCAGCCCCAGGG---GCTCTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2801899 324 - 123690457 gaagct------gggcaggagggagggaggACACA-TCCTATCCACGCAGCTGTCC-----CGGAGTCAATCCTGGGGATGGtgga-ttagggctctggccccacggtttcccagctgtttggcttcgaagaaactac----------t------gaacttgg--------ttttctcctagtaagaatgggg---ataacattac--ctgcctca-t-gggctgttgtaagagctaaaggggataatccgaaaactatgc--------ctga------------ccc-tgctgagc----acagggtagac-gGCGGCTGGCATCACCTCG-GGCGGCGGCCTCCAGCGCCCTCCTCCCGGCCCAGGGCGCAGCTTCCAGCCCCGGGG---GCTCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316182 321 - 204787373 GAAGCC------GGGCAGGAGGGAGGGA-GCCACA-CCCCATCCGCGCAGCTGTCC-----CGGAGTAAATCGTGCGGATGGGGGA-TTACGGCTctggcgccacggtttcccagctgtttggcttcgaagaaactac----------t------taacttgg--------ttttctcctggtaggaacgggg---ataacatgac--ttgcctca-c-gggctgttgtgagagctaaaggggctcatccgaaaaccatgc--------ctgg------------ccc-tgcggagc----acacggtagac-gG-GGCTGGCGTCA-CTCG-GGCCGCGGCCTCCAGCGCCTTCCTCCAGGCCCAGGGCGCAGCTTCCAGCCCCGGGG---GCTCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192381448 321 - 192460366 GAAGCC------GGGCAGGAGGGAGGGA-GCCACA-CCCCATCCGCGCAGCTGTCC-----CGGAGTAAATCGTGCGGATGGGGGA-TTACGGCTctggcgccacggtttcccagctgtttggcttcgaagaaactac----------t------taacttgg--------ttttctcctggtaagaacgggg---ataacatgac--ttgcctca-c-gggctgttgtgagagctaaaggggctcatccgaaaaccatgc--------ctgg------------ccc-tgcggagc----acacggtagac-gG-GGCTGGCGTCA-CTCG-GGCCGCGGCCGCCAGCGCCTTCCTCCAGGCCCAGGGCGCAGCTTCCAGCCCCGGGG---GCTCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121045 321 - 19675229 GAAGCC------GGGCAGGAGGGAGGGA-GCCACA-CCCCATCCGCGCAGCTGTCC-----CGGAGTAAATGGTGCGGATGGGGGA-TTACGGCTctggcgccacggtttcccagctgtttggcttcgaagaaactac----------t------taacttgg--------ttttctcctggtaagaacgggg---ataacatgac--ttgcctca-c-gggctgttgtgagagctaaaggggctcatccgaaaaccatgc--------ctgg------------ccc-agcggagc----acacggtagac-gG-GGCTGGCGTCA-CTCG-GGCCGCGGCCTCCAGCGCCTTCCTCCGGGCCCAGGGCGCAGCTTCCAGCCCCGGGG---GCTCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16354726 300 - 16847902 CAAGCC------GGGCAGGAGGGGGGGA-GCCACG-CCCCATCCGCGCAGCTGTCC-----CGGAGTAAATCCTGGGGATGGGGGA-TTACGGCTctggcgccacggtttcccagctgtttggcttcgaagaaactac----------t------taacttgg--------ttttctcctggtaagaacgggg---ataacatgac--ttgcctca-c-gggctgttgtgagagctaaaggggatcatccgaaaaccatgc--------ctgg------------ccc-cgcggagc----acacggtagac-gG-GGCTGGCGTCA-----------------------CCTTCCTCCAGGCCCAGGGCGCAGCTTCCAGCCCCGGGG---GCTCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91327269 322 + 91754291 CAAGCC------GGGCAGGAGGGAGGGA-GCCACA-CCCCATCCGCGCACCTGTCC-----CGGAGTAAATCCTGGGGATGGGGGA-TTACGGCTctggcgccacggtttcccagctgtttggcttcgaagaaactac----------t------taacttgg--------ttttctcctggtaagaacgggg---ataacatgac--ttgcctca-c-gggctgttgtgagagctaaaggggatcatccgaaaaccatgc--------ctgg------------ccc-tgcggagc----acaccgtagacgGG-GGCTGGCGTCA-CTCG-GGCCGCGGCCTCCAGCGCCTTCCTCCAGGCCCAGGGCGCAGCTTCCAGCCCCGGGG---GCTCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1387928 300 + 1977891 CAAGCC------GGGCAGGAGGGGGGGA-GCCACG-CCCCATCCGCGCAGCTGTCC-----CGGAGTAAATCCTGGGGATGGGGGA-TTACGGCTctggcgccacggtttcccagctgtttggcttcgaagaaactag----------t------taacttgg--------ttttctcctggtaagaatgggg---ataacatgac--ttgcctca-c-gggctgttgtgagagctaaaggggatcatccgaaaaccatgc--------ctgg------------ccc-tgcggagc----acacggtagac-gG-GGCTGGCGTCA-----------------------CCTTCCTCCAGGCCCAGGGCGCAGCTTCCAGCCCCGGGG---GCTCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7333005 323 - 7796314 GAAGCC------AGGCAGGAGAGAGGAG-GCCACA-CCCCACCCGCGCAGCTGTCC-----CGGAGTAAATCGTGGGGAGGGGGGA-TTACGGCcctggcgccacggtttcccagctgtttggcttcgaagaaactac----------t------taactcgg--------ttttctcctagtaagaatgggg---ataacattcttgttgcctca-g-gggctgttgtgagagctaaaggggataacccgaaaaccatgc--------ctgg------------ccc-tgcggagc----acacggtagac-gG-GGCTGGCATCA-CTTG-GGCCGCGGCCTCCAGCGCCTTCCTCCAGGCCCAGGGCGCAGCTTCCAGCCCTGGGG---GCTCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73805907 282 + 74750902 GAAGCC------GGGCAGGAGGGAGGGAGGTCACA-TTCCACCCTCACAGCTGTCC-----CCGAGTAAATCCTGGGGGTGGCAGGATGAGGTttctggcaccacggtttcccagctgtttggtttcaaagaaactac----------t------taacttgg---------tttcttctagtcggaatggggataataacgttac--ctgcctca-c-aggctgctgtgggagttgaaggggatcatctgaaaaccaggc--------ctgg----------------tgcagagc----acacagtGGCT-GC------------------------AGCCTCCAGCCCCTTCCTCCCAG-------------------CCCCAGGC---ACTCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256583 301 - 17725628 GAAGCC------GGGCAGGACGGAGGGAGGTCACG-TTCCACCCTCGCAGCTGTCC-----CGGAGTAAATCCTGGGGATGGCGGGATGAGGGCTCTGGCGCCACGGTCTCCCAGCTGTTTGGTTTCAAAGAAACT---------------------Acttgg---------tttcttctagtaggaatggggataataacattac--ctgcctcg-c-aggctgctgtgggagttgaaggagatcatctgaaaactgtgc--------ctggcacagagcctggccc-tgcagagc----acgcggtgggc-gttggtGGGCACCACCTCC-GGCCG-AGCCTCCAGCACCTTCCTCCCAG-----------------------------------C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6344549 339 + 6778120 GGAGCC------GGGCAGGAGGGAGGGAGGTCACG-TTCCACCCTCGCAGCTGTCC-----AGGAGTAAATTCTGGGGATGGCAGCATGAGGGttctggcgccacggtttcccagctgtttggtttcaaagaaaccac----------t------taacttgg---------tttcttctagtaagaatggggatgataacattac--ctgcccca-c-aggctgctgtgggggttgaaggggatcatctgaaaaccatgc--------ctggcgcagagcctggcCC-TGCAGAGC----ACACGGTGGCC-GTCGGCGGGCACCACCTTG-GGCCGCAGCCTCCAGCACCTTCCTCCCAGTCCAGGGTGCAGCTCCCAGCCCTGGGC---GCTCGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19640 333 - 21398 GAAGCC------GGGCAGGAGGGAGGGAGGTCACATTTCCACCCTTGCAGCTGTCC-------Gagtaaatcct-gggatggcggg-tgatggttctggcgccgcggttt-ccggctgtttggtttcaaagaaactac----------t------taacttgg---------tttcttctagtaggaatggggctaataacatgac--ctgcctca-c-aggctgctgtgggagttgaaGGCTGTCTTCTGAAAACCATGC--------CTGGCGCAGAGCTTGGCCC-TGCAGAGC----CCATGGTGGCG-GTCGGTGGGCACCACCTCG-GGCCACAGCCTCCAGCACCTTCCTTCCAGTCCAGGGCGCAGCCCCCAGCCCT-GGC---GCTC-T i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 185321 336 + 608964 GAAGGCAAAGGGGGGCAGGAGGGAGGGAGGACATA-TCCTGCtggtgtagtggccc-----cagagtaaatccggaggtgggagga-ctagggtcctggctccaccattcaccagctgtttgacttcgaggaaacaac----------t------tacctcagtgtcccaattttcttatggt-agaatgaagatagtaatattac--ctgccccaga-gggccattgtgtga--caaacaagatgatctgagaggggtgc--------ccag----------------catgaacc----tggcCCCAGGC-GCTGGCTAACACAGCCTCA-CTCCACACTCTCCAGCACTTTCCTCTTCCTCCAGGCCCAGGCCCTAGACCTCAGTT---GCTCTC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2301525 314 - 31377067 agacac------aggca-----gaggga-gacgca-ggc--tccctgcaggagcccgatgcaggactcgatcccacgacccaggga-tcacg-ccctgggcccgagg-----cagaggct---cacccaaggagccacccgggcgcctc------tgcctccc--------ttttcttggagt-aaactgagg---atgacaata---ttgcctca-cggggctgttgtgagctttaaatgagatcatctgagaaacgtgcgctctCAGCCGG------------CCCATGCCGCGCCCTAGCGCTGTCGGC-GG-------CGCAACCTCACCGTCAGGCCCACCCGCCTCGTCCTCGGGGCTCGGGTCCAGGCCCTCTG----------------- i canFam3.chr33 I 4 C 0 s dasNov3.JH569502 2677728 349 - 6579706 aaaggg------aggtaggaaggagGGCCGACACC-TATTGCtggtgtagtggttc-----aagagtgaactctagaggtagcaggtttagggtcctggctccctcatttactagctgtgtgactttaaagaaattaa----------cttttagtgcctcag--------ttttcttacagt-taagcagggctaataatattac--ctacttca-caggaccattgggagattgaaatgagatcatcaaagaaatgagt--------ctagtgcagaggtggtcca-tgttaaac----actccatagat-attagctttcatGACCTCATTATCACATGCTCTGTCACCTTCCTCTTC-CCCCGGGCTCAGCTTCTAGCCCTGAGCATTGCTCTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14775185 454 - 22200726 I e mm10.chr16 32767613 1009 + 98207768 I e micMur3.chr1 88364944 463 + 114275543 I a score=191884.000000 s hg38.chr3_KI270934v1_alt 31722 22 + 163458 C--CAGCTGCTTTCCTGGGCGTCG- s panTro5.chr3 2494089 22 - 202621043 C--CAGCCGCTTTCCTGGGCGTCG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91999 22 - 190779 C--CAGCCGCTTTCCTGGGCGTCG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14605 22 + 55620 C--CAGCCGCTTTCCTGGGCGTCG- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802223 22 - 123690457 C--CAGCCGCTTTCCTGGGCGTCG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316503 22 - 204787373 C--CAGCCGCTCTCCTGGGCGTCG- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192381769 22 - 192460366 C--CAGCCGCTCTCCTGGGCGTCG- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121366 22 - 19675229 C--CAGCCGCTCTCCTGGGCGTCG- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355026 22 - 16847902 C--CAGCCGCTCTCCTGGGCGTCG- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91327591 22 + 91754291 C--CAGCCGCTCTCCTGGGCGTCG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1388228 22 + 1977891 C--CAGCCGCTCTCCTGGGCGTCG- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7333328 22 - 7796314 C--CAGCCGCTCGCCTGGGCGTCG- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73806189 22 + 74750902 C--CCTATGCTTTCCTGGGCATCT- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256884 22 - 17725628 C--CCTCTGCTTCCCTGGGCATCT- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6344888 22 + 6778120 C--CCTCTGCTTCCCTGGGCATCT- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19973 22 - 21398 C--CCTCTGCCTTCCTGGGCATCT- i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 185657 23 + 608964 TG-GAGCCTCCTATCTAGGTTTCT- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32768622 22 + 98207768 C--TGGCCTCATTTCCAGGCCTCT- i mm10.chr16 I 1009 C 0 s canFam3.chr33 2301839 21 - 31377067 ---TGGCCTCCATGCTCAGGCCCT- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2678077 24 - 6579706 -TGGTGCCTCCTTTCTGGGCCTCTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14775185 454 - 22200726 I e micMur3.chr1 88364944 463 + 114275543 I a score=21000.000000 s hg38.chr3_KI270934v1_alt 31744 1 + 163458 G s panTro5.chr3 2494111 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92021 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14627 1 + 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802245 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316525 1 - 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192381791 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121388 1 - 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355048 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91327613 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1388250 1 + 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7333350 1 - 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73806211 1 + 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256906 1 - 17725628 G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6344910 1 + 6778120 G i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19995 1 - 21398 G i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 14775639 1 - 22200726 G i proCoq1.NW_012133858v1 I 454 C 0 s otoGar3.GL873829 185680 1 + 608964 G i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32768644 1 + 98207768 G i mm10.chr16 C 0 C 0 s canFam3.chr33 2301861 1 - 31377067 G i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2678101 1 - 6579706 G i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88364944 463 + 114275543 I a score=1148789.000000 s hg38.chr3_KI270934v1_alt 31745 72 + 163458 CTCCACCTGCGGGTCGGGCTCAGGCCCCCTCCCATCTCCTTCCAGGTCCAATGGCTCCTTGAGCCTCACGAC s panTro5.chr3 2494112 72 - 202621043 CTCCACCTGCGGGTCGGGCTCAGGCCCCCTCCCATCTCCTTCCAGGTCCAATGGCTCCTTGAGCCTCACGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92022 72 - 190779 CTCCACCTGCGGGTCGGGCTCAGGCCCCCTCCCATCTCCTTCCAGGTCCAATGGCTCCTTGAGCCTCACGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14628 72 + 55620 CTCCACCTGCGGGTCGGGCTCAGGCCCCCTCCCATCTCCTTCCAGGTCCAATGGCTCCTTGAGCCTCACGAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802246 72 - 123690457 CTCCACCTGCGAGTGGGGCTCAGGTCCCCTCCCATCTCCTTCCAGGTCCAATGGCTCCTTGAGCCTCACGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316526 72 - 204787373 CTCCACCTGCGGGTCGGGCTCAGACCCCTTCCCATCTCCTTCCAGGTCCAATGGCTCCTTGAGCCTCATGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192381792 72 - 192460366 CTCCACCTGCGGGTCGGGCTCAGACCCCTTCCCATCTCCTTCCAGGTCCAATGGCTCCTTGAGCCTCATGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121389 72 - 19675229 CTCCACCTGCGGGTCGGGCTCAGACCCCTTCCCATCTCCTTCCAGGTCCAATGGCTCCTTGAGCCTCATGAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355049 72 - 16847902 CTCCACCTGCGGGTCGGGCTCAGACCCCTTCCCATCTCCTTCCAGGTCCAATGGCTCCTTGAGCCTCATGAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91327614 72 + 91754291 CTCCACCTGCGGGTCGGGCTCAGACCCCTTCCCATCTCCTTCCAGGTCCAATGGCTCCTTGAGCCTCATGAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1388251 72 + 1977891 CTCCACCTGCGGGTCGGGCTCAGACCCCTTCCCATCTCCTTCCAGGTCCAATGGCTCCTTGAGCCTCATGAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7333351 72 - 7796314 CTCCACCTGCGGGTCGGGCTCAGACCCCTTCCCATCTCCTTCCAGGTCCAATGGCTCCTTGAGCCTCATGAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73806212 72 + 74750902 CTGCACCTGCGGGTCGGCCTCAGCTCCCCTCCCATCTCCTTGCAGGTTCAGTGGCTCCTTGAGCCTCACGAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256907 71 - 17725628 CTGCACCTGCGGGTCGGGCTCAGATCCCCTCCCGTC-CCCTGCAGGTTCAGTGGCTCCTTGAGCCTCACGAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6344911 72 + 6778120 CTGCACCTGTGGGTCAGGCTCAGATCCCCTCCCGTTTCCTTGCAGGTTCAGTGGCTCCTTGAGCCTCATGAC i cebCap1.NW_016107444v1 C 0 I 617 s aotNan1.NW_018492867v1 19996 71 - 21398 CTGCACCTGCGGGGCGGGCTTCAGATCCCTCCCGTC-TCTTGCAGGTTCAGTGGCTCCTTGAGCCTCACGAC i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88365407 72 + 114275543 CTCCACCTGCAGGTCAGACTTAAGCCTCCTCCAATTCCCTTCCAGGTTCAATGGTTCCTTGAGCCCAATGAC i micMur3.chr1 I 463 C 0 s proCoq1.NW_012133858v1 14775640 72 - 22200726 CTCCACCTCCAGGTCGGACTTACGCCTCCTCCAATTCCCTTCCAGGTTCAATGGTTCCTTGAGCCCAATGAC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 185681 72 + 608964 CTCCACCTGCAGGGCCGACTTAGGCCTCCTCCAATTCCTTTCCAGGTTCAATGGCTCCTCGAGGCCCATGAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32768645 72 + 98207768 CTGTGCCTGCTGGTTGGGCTTAGGCCTCCTCCAATTCTTTCCCAGGTTCAGTGGTTTCTTGAGCCCAGTGAC i mm10.chr16 C 0 C 0 s canFam3.chr33 2301862 72 - 31377067 GCCCACCCGAGGGTCCGGCTTAGGCCTCCTCCAATTCTCTCCCAGGTCCGATGGCTCCTCGAGCCCAATGAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2678102 63 - 6579706 TCCCATTT---------ACTTAGGCCTCCTCCATTTTCCTTCCAGGTTCAGTGGTCCCTTGAACCCAATGAC i dasNov3.JH569502 C 0 C 0 a score=190427.000000 s hg38.chr3_KI270934v1_alt 31817 15 + 163458 GCAATCCGTGTCCTG s panTro5.chr3 2494184 15 - 202621043 GCAATCCGTGTCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92094 15 - 190779 GCAATCCGTGTCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14700 15 + 55620 GCAATCCGTGTCCTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802318 15 - 123690457 GCAATCCATGTCCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316598 15 - 204787373 GGAATCCATGTCCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192381864 15 - 192460366 GGAATCCATGTCCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121461 15 - 19675229 GGAATCCATGTCCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355121 15 - 16847902 GGAATCCATGTCCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91327686 15 + 91754291 GGAATCCATGTCCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1388323 15 + 1977891 GGAATCCATGTCCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7333423 15 - 7796314 GGAATCCATGTCCTG i colAng1.NW_012118932v1 C 0 M 965 s calJac3.chr17 73806284 15 + 74750902 AGAATCCGTGTTCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256978 15 - 17725628 AGAATCCGTGTTCTG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 20067 15 - 21398 AGAATCCGTGTTCTG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88365479 15 + 114275543 ACTATCCGTGTTCTG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14775712 15 - 22200726 ACTATCCGTGTTCTG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 185753 15 + 608964 ACTATCCGTGTTCTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32768717 15 + 98207768 AAAATCCGAGTCGTA i mm10.chr16 C 0 C 0 s canFam3.chr33 2301934 15 - 31377067 ACGGTCCGCGTGCAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2678165 15 - 6579706 ACCATCCACATTCTG i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 6344983 617 + 6778120 I a score=605180.000000 s hg38.chr3_KI270934v1_alt 31832 51 + 163458 CTGGATAACCAGACTGTGACATTTCAGCCTGACCATGAAGACGGCGGAGGT s panTro5.chr3 2494199 51 - 202621043 CTGGATAACCAGACTGTGACATTTCAGCCTGACCATGAAGACGGCGGAGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92109 51 - 190779 CTGGATAACCAGACTGTGACATTTCAGCCTGACCATGAAGACGGCGGAGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14715 51 + 55620 CTGGATAACCAGACTGTGACATTTCAGCCTGACCATGAAGACGGCGGAGGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802333 51 - 123690457 CTGGATAACCAGACTGTGACATTTAAGCCTGGCCATGAAGACGGCAGAGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316613 51 - 204787373 CTGGATAACCAGACTGTGACATTTGAGCCTGGACATGGAGACGGCGGAGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192381879 51 - 192460366 CTGGATAACCAGACTGTGACATTTGAACCTGGACATGGAGACGGCGGAGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121476 51 - 19675229 CTGGATAACCAGACTGTGACATTTGAGCCTGGACATGGAGACGGCGGAGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355136 51 - 16847902 CTGGATAACCAGACTGTGACATTTGAGCCTGGCCATGGAGACGGCGGAGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91327701 51 + 91754291 CTGGATAACCAGACTGTGACATTTGAGCCTGGCCATGGAGACGGCGGAGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1388338 51 + 1977891 CTGGATAACCAGACTGTGACATTTGAGCCTGGCCATGGAGACGGCGGAGGT i manLeu1.NW_012102020v1 C 0 T 4962 s calJac3.chr17 73806299 51 + 74750902 CTTGACAACCAGAATGTGACGTTTGAGCCTGACCACGAAGACGATGGAGGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17256993 51 - 17725628 CTTGATAACCGGAATGTGACATTTGAACCTGACCACGAAGACGATGGAGGT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 20082 51 - 21398 CTTGATAACCAGAATGTGACATTTGAGCCTGACCACGAAGATGATGGAGGT i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 88365494 51 + 114275543 CTCAATAACCAGACTGTGACATTTGAGACTAAGCATGAAGATGGAGAAGGT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14775727 51 - 22200726 CTCAATAACCAGACTGTGACATTTGAGACTAAGCATGAAGATGGAGAAGGT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 185768 51 + 608964 CTCAATAACCAGACAGTGACATTTGAGACAAAGTATGAAAACGGAGAAGGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32768732 45 + 98207768 TACAATAACCAGACTGTGGCCTTTAACACCAG------AGACACTGAAGGT i mm10.chr16 C 0 C 0 s canFam3.chr33 2301949 42 - 31377067 GTCAACAACCAGACTGTGACGTTTGAGACTCAGCACGAAGGT--------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2678180 51 - 6579706 ATCAACAACCACACTGTGACGTTTGAAACCAACCGTGAAGATGCAGAAGGT i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M a score=24211.000000 s hg38.chr3_KI270934v1_alt 31883 2 + 163458 AG s panTro5.chr3 2494250 2 - 202621043 AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92160 2 - 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14766 2 + 55620 AG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802384 2 - 123690457 AG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316664 2 - 204787373 GG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192381930 2 - 192460366 GG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121527 2 - 19675229 GG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355187 2 - 16847902 GG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91327752 2 + 91754291 GG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73806350 2 + 74750902 AG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257044 2 - 17725628 AG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 20133 2 - 21398 AG i aotNan1.NW_018492867v1 C 0 N 0 s micMur3.chr1 88365545 2 + 114275543 AG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14775778 2 - 22200726 AG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 185819 2 + 608964 AG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32768777 2 + 98207768 AG i mm10.chr16 C 0 C 0 s canFam3.chr33 2301991 2 - 31377067 AG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2678231 2 - 6579706 AG i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=51591.000000 s hg38.chr3_KI270934v1_alt 31885 6 + 163458 GTTGGG s panTro5.chr3 2494252 6 - 202621043 GCTGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92162 6 - 190779 GCTGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14768 6 + 55620 GCTGGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802386 6 - 123690457 GCTGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316666 6 - 204787373 GCTGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192381932 6 - 192460366 GCTGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121529 6 - 19675229 GCTGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355189 6 - 16847902 GCTGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91327754 6 + 91754291 GCTGGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73806352 6 + 74750902 GGTGGG i calJac3.chr17 C 0 I 678 s saiBol1.JH378146 17257046 5 - 17725628 GGCGG- i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 88365547 6 + 114275543 GCTGGG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14775780 6 - 22200726 GCTGGG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 185821 6 + 608964 GCCGAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32768779 6 + 98207768 GCTCCG i mm10.chr16 C 0 C 0 s canFam3.chr33 2301993 6 - 31377067 GCTGGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2678233 6 - 6579706 TCTGAG i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=20578.000000 s hg38.chr3_KI270934v1_alt 31891 2 + 163458 GA s panTro5.chr3 2494258 2 - 202621043 GA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92168 2 - 190779 GA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14774 2 + 55620 GA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802392 2 - 123690457 GA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316672 2 - 204787373 GA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192381938 2 - 192460366 GA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121535 2 - 19675229 GA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355195 2 - 16847902 GA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91327760 2 + 91754291 GA i chlSab2.chr15 C 0 C 0 s saiBol1.JH378146 17257051 2 - 17725628 GA i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 88365553 2 + 114275543 GA i micMur3.chr1 C 0 I 517 s proCoq1.NW_012133858v1 14775786 2 - 22200726 GA i proCoq1.NW_012133858v1 C 0 I 425 s otoGar3.GL873829 185827 2 + 608964 GA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32768785 2 + 98207768 TA i mm10.chr16 C 0 C 0 s canFam3.chr33 2301999 2 - 31377067 GA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2678239 2 - 6579706 AA i dasNov3.JH569502 C 0 C 0 e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=7047.000000 s hg38.chr3_KI270934v1_alt 31893 3 + 163458 GCG- s panTro5.chr3 2494260 3 - 202621043 GCG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92170 3 - 190779 GCG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14776 3 + 55620 GCA- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802394 3 - 123690457 GCG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316674 3 - 204787373 GCG- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192381940 3 - 192460366 GCC- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121537 3 - 19675229 GCG- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355197 3 - 16847902 GCG- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91327762 3 + 91754291 GCG- i chlSab2.chr15 C 0 C 0 s saiBol1.JH378146 17257053 3 - 17725628 GTG- i saiBol1.JH378146 C 0 I 10 s mm10.chr16 32768787 3 + 98207768 ATG- i mm10.chr16 C 0 C 0 s canFam3.chr33 2302001 2 - 31377067 -CA- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2678241 3 - 6579706 -CAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e micMur3.chr1 88365555 517 + 114275543 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e otoGar3.GL873829 185829 0 + 608964 C e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=7649.000000 s hg38.chr3_KI270934v1_alt 31896 2 + 163458 ---CC s panTro5.chr3 2494263 2 - 202621043 ---CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92173 2 - 190779 ---CC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14779 2 + 55620 ---CC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802397 2 - 123690457 ---CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316677 2 - 204787373 ---CC i rheMac8.chr2 C 0 I 6 s macFas5.chr2 192381943 2 - 192460366 ---CC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121540 2 - 19675229 ---CC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355200 2 - 16847902 ---CC i cerAty1.NW_012004056v1 C 0 I 5 s chlSab2.chr15 91327765 2 + 91754291 ---CC i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 185829 1 + 608964 ----C i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32768790 2 + 98207768 ---TC i mm10.chr16 C 0 C 0 s canFam3.chr33 2302004 2 - 31377067 ---CC i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2678244 5 - 6579706 CTGTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e micMur3.chr1 88365555 517 + 114275543 I e saiBol1.JH378146 17257056 10 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=5952.000000 s hg38.chr3_KI270934v1_alt 31898 3 + 163458 GGC s panTro5.chr3 2494265 3 - 202621043 GGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92175 3 - 190779 GGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14781 3 + 55620 GGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802399 3 - 123690457 GGC i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 185830 3 + 608964 ATC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32768792 3 + 98207768 AGC i mm10.chr16 C 0 I 351 s canFam3.chr33 2302006 3 - 31377067 GTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2678249 3 - 6579706 GGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e micMur3.chr1 88365555 517 + 114275543 I e macNem1.NW_012014355v1 19121542 0 - 19675229 C e saiBol1.JH378146 17257056 10 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e chlSab2.chr15 91327767 0 + 91754291 C e cerAty1.NW_012004056v1 16355202 5 - 16847902 I e macFas5.chr2 192381945 0 - 192460366 C e rheMac8.chr2 2316679 6 - 204787373 I a score=-3064.000000 s hg38.chr3_KI270934v1_alt 31901 15 + 163458 CGCCC--CCTCCCCGCA s panTro5.chr3 2494268 15 - 202621043 CGCCC--CCTCCCCGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92178 15 - 190779 CGCCC--CCTCCCCGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14784 15 + 55620 CGCCC--CCTCCCCGCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802402 15 - 123690457 CGCCC--CCTCCCCGCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192381945 5 - 192460366 TGCCT------------ i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121542 5 - 19675229 TACCT------------ i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91327767 7 + 91754291 TATCTCC---------- i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 185833 9 + 608964 AGCCC--TCTT------ i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2302009 15 - 31377067 AGCTC--CCCTGCCTCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2678252 15 - 6579706 CACCT--CTCCTGCTTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e saiBol1.JH378146 17257056 10 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355202 5 - 16847902 I e rheMac8.chr2 2316679 6 - 204787373 I a score=7660.000000 s hg38.chr3_KI270934v1_alt 31916 3 + 163458 CCG s panTro5.chr3 2494283 3 - 202621043 CCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92193 3 - 190779 CCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14799 3 + 55620 CCG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802417 3 - 123690457 CCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316685 3 - 204787373 CCG i rheMac8.chr2 I 6 C 0 s macFas5.chr2 192381950 3 - 192460366 CCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121547 3 - 19675229 CCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355207 3 - 16847902 CCG i cerAty1.NW_012004056v1 I 5 C 0 s chlSab2.chr15 91327774 1 + 91754291 --G i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2302024 2 - 31377067 TC- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2678267 3 - 6579706 CCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e saiBol1.JH378146 17257056 10 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e otoGar3.GL873829 185842 0 + 608964 C e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=126796.000000 s hg38.chr3_KI270934v1_alt 31919 28 + 163458 GGAGCAGCGAGGTGGGCGGGAAGCCGCG s panTro5.chr3 2494286 28 - 202621043 GGAGCAGCGAGGTGGGCGGGAAGCCGCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92196 28 - 190779 GGAGCAGCGAGGTGGGCGGGAAGCCGCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14802 28 + 55620 GGAGCAGCGAGGTGGGCGGGAAGCCGCG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802420 28 - 123690457 GGAGCAGTGAGGTGGGCGGGAAGCCGCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316688 28 - 204787373 GGAGCAGCGAGCTGGGCGGGAAGCCGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192381953 28 - 192460366 GGAGCAGCGAGCTGGGCGGGAAGCCGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121550 28 - 19675229 GGACCAGCGAGCTGGGCGGGAAGCCGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355210 28 - 16847902 GGAGCAGCGAGCTGGGCGGGAAGCCGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91327775 28 + 91754291 GCAGCAGCGAGCTGGGCGGGAAGCCGTG i chlSab2.chr15 C 0 C 0 s saiBol1.JH378146 17257066 28 - 17725628 GGAGCAGCGAGCCGTGCGGGGAGCCGTG i saiBol1.JH378146 I 10 I 34 s otoGar3.GL873829 185842 5 + 608964 -----------------------CTGTG i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2678270 26 - 6579706 GGGTCA--GAGTTCAGAGGGGTGCCCAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e canFam3.chr33 2302026 0 - 31377067 C e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=26082.000000 s hg38.chr3_KI270934v1_alt 31947 9 + 163458 TTGCGGTGC-- s panTro5.chr3 2494314 9 - 202621043 TTGCGGTGC-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92224 9 - 190779 TTGCGGTGC-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14830 9 + 55620 TTGCGGTGC-- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802448 9 - 123690457 TTGCGGTGC-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316716 9 - 204787373 TTGCGGTGC-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192381981 9 - 192460366 TTGCGGTGC-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121578 9 - 19675229 TTGCGGTGC-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355238 9 - 16847902 TTGCTGTGC-- i cerAty1.NW_012004056v1 C 0 M 197 s chlSab2.chr15 91327803 9 + 91754291 Ttgctgtgc-- i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 185847 2 + 608964 TC--------- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2678296 8 - 6579706 ---CTGTCCTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e saiBol1.JH378146 17257094 34 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e canFam3.chr33 2302026 0 - 31377067 C e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=32057.000000 s hg38.chr3_KI270934v1_alt 31956 10 + 163458 AGGGCCGGGC s panTro5.chr3 2494323 10 - 202621043 AGGGCCGAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92233 10 - 190779 AGGGCCGGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 14839 10 + 55620 AGGGCCGAGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802457 10 - 123690457 AGGGCCGAGC i nomLeu3.chr11 C 0 T 50 s rheMac8.chr2 2316725 10 - 204787373 AGGGCCGAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192381990 10 - 192460366 AGGGCCGAGC i macFas5.chr2 C 0 T 23 s macNem1.NW_012014355v1 19121587 10 - 19675229 AGGGCCGAGC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91327812 10 + 91754291 agggccgagc i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 185849 1 + 608964 -----C---- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2302026 9 - 31377067 -GGGTCGGGC i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 2678304 10 - 6579706 AAAGCAGTGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e saiBol1.JH378146 17257094 34 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M a score=-3598.000000 s hg38.chr3_KI270934v1_alt 31966 3 + 163458 --GCG s panTro5.chr3 2494333 3 - 202621043 --GCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92243 3 - 190779 --GCG i panPan2.chrUn_NW_014024201v1 C 0 M 1262 s gorGor5.CYUI01001831v1 14849 3 + 55620 --GCT i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2316735 3 - 204787373 --GCA i rheMac8.chr2 C 0 C 0 s otoGar3.GL873829 185850 3 + 608964 --CCA i otoGar3.GL873829 C 0 I 2 s canFam3.chr33 2302037 1 - 31377067 --G-- i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 2678314 3 - 6579706 TGG-- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e macNem1.NW_012014355v1 19121597 0 - 19675229 C e saiBol1.JH378146 17257094 34 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e chlSab2.chr15 91327822 0 + 91754291 C e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e macFas5.chr2 192382000 23 - 192460366 T e nomLeu3.chr11 2802467 50 - 123690457 T a score=2829.000000 s hg38.chr3_KI270934v1_alt 31969 13 + 163458 TGGCGGT-GCAGGG s panTro5.chr3 2494336 13 - 202621043 TTGTGTT-GCAGGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 14852 13 + 55620 TTGCGGT-GCCGGG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2316738 13 - 204787373 TTGCGGT-TCAGGG i rheMac8.chr2 C 0 C 0 s otoGar3.GL873829 185855 11 + 608964 GGGGAGT-TCAG-- i otoGar3.GL873829 I 2 C 0 s canFam3.chr33 2302038 13 - 31377067 GGGGGGC-TTGGGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2678317 14 - 6579706 CAGCAGCAGCAGGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e macNem1.NW_012014355v1 19121597 0 - 19675229 C e saiBol1.JH378146 17257094 34 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e chlSab2.chr15 91327822 0 + 91754291 C e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e macFas5.chr2 192382000 23 - 192460366 T e nomLeu3.chr11 2802467 50 - 123690457 T e panPan2.chrUn_NW_014024201v1 92246 1262 - 190779 M a score=-150.000000 s hg38.chr3_KI270934v1_alt 31982 4 + 163458 CCGG- s panTro5.chr3 2494349 4 - 202621043 CCCG- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 14865 4 + 55620 CCGG- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802417 4 - 123690457 CCGG- i nomLeu3.chr11 T 50 C 0 s rheMac8.chr2 2316751 4 - 204787373 TCCA- i rheMac8.chr2 C 0 C 0 s dasNov3.JH569502 2678331 4 - 6579706 -CAGG i dasNov3.JH569502 C 0 I 312 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e macNem1.NW_012014355v1 19121597 0 - 19675229 C e saiBol1.JH378146 17257094 34 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e canFam3.chr33 2302051 0 - 31377067 C e otoGar3.GL873829 185866 0 + 608964 C e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e chlSab2.chr15 91327822 0 + 91754291 C e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e macFas5.chr2 192382000 23 - 192460366 T e panPan2.chrUn_NW_014024201v1 92246 1262 - 190779 M a score=3151.000000 s hg38.chr3_KI270934v1_alt 31986 21 + 163458 GTGCGTTGTGGTGCAGGGCCG s panTro5.chr3 2494353 21 - 202621043 GTGCGTGGCGGTGCAGGGCCG i panTro5.chr3 C 0 M 4298 s gorGor5.CYUI01001831v1 14869 21 + 55620 GTGCGTTGCGGTGGCGGGCCG i gorGor5.CYUI01001831v1 C 0 I 22 s nomLeu3.chr11 2802421 18 - 123690457 GAGCAGTGAGGT---GGGCGG i nomLeu3.chr11 C 0 I 3 s rheMac8.chr2 2316755 21 - 204787373 GTGTGTGGCGGTGCAGGGTCC i rheMac8.chr2 C 0 I 1 s chlSab2.chr15 91327822 19 + 91754291 --gcgttgcggtgcagggtcc i chlSab2.chr15 C 0 I 1 s otoGar3.GL873829 185866 6 + 608964 -------------CAGGGT-- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2302051 1 - 31377067 -----------------G--- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e macNem1.NW_012014355v1 19121597 0 - 19675229 C e saiBol1.JH378146 17257094 34 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e macFas5.chr2 192382000 23 - 192460366 T e panPan2.chrUn_NW_014024201v1 92246 1262 - 190779 M a score=-2670.000000 s hg38.chr3_KI270934v1_alt 32007 2 + 163458 -GG s gorGor5.CYUI01001831v1 14912 2 + 55620 -GG i gorGor5.CYUI01001831v1 I 22 C 0 s nomLeu3.chr11 2802442 2 - 123690457 -GC i nomLeu3.chr11 I 3 C 0 s rheMac8.chr2 2316777 1 - 204787373 -G- i rheMac8.chr2 I 1 C 0 s chlSab2.chr15 91327842 1 + 91754291 -g- i chlSab2.chr15 I 1 C 0 s canFam3.chr33 2302052 2 - 31377067 GG- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e macNem1.NW_012014355v1 19121597 0 - 19675229 C e saiBol1.JH378146 17257094 34 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e otoGar3.GL873829 185872 0 + 608964 C e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e macFas5.chr2 192382000 23 - 192460366 T e panPan2.chrUn_NW_014024201v1 92246 1262 - 190779 M e panTro5.chr3 2494374 4298 - 202621043 M a score=15891.000000 s hg38.chr3_KI270934v1_alt 32009 28 + 163458 CGCGTGGCGGTGCCGCGCCGAGTGC----------------------TTT s gorGor5.CYUI01001831v1 14914 50 + 55620 TGCGTGGCGGTGCCGGGCCGAGTGCGTTGTGGTGCAGGGCCGAGCGCTTT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802444 28 - 123690457 CGCGTTGCGGTGCAGGGCCGAGCGC----------------------GTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316778 28 - 204787373 TGCGTGGCGATCCAGGGCCCAGCGC----------------------GTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192381977 28 - 192460366 CGTGTTGCGGTGCAGGGCCGAGCGC----------------------ATT i macFas5.chr2 T 23 C 0 s chlSab2.chr15 91327843 28 + 91754291 cgtgtggcggtgcagcgtccagggc----------------------gtt i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 185872 12 + 608964 ----------------GCCCAGTGC----------------------CCT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2302054 19 - 31377067 ---------CACCCACCCCGGGAGC----------------------CTC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e macNem1.NW_012014355v1 19121597 0 - 19675229 C e saiBol1.JH378146 17257094 34 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e panPan2.chrUn_NW_014024201v1 92246 1262 - 190779 M e panTro5.chr3 2494374 4298 - 202621043 M a score=4360.000000 s hg38.chr3_KI270934v1_alt 32037 2 + 163458 GC s panTro5.chr3 2498674 2 - 202621043 GC i panTro5.chr3 M 4298 C 0 s gorGor5.CYUI01001831v1 14964 2 + 55620 GC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802472 2 - 123690457 GC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316806 2 - 204787373 GC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192382005 2 - 192460366 GC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91327871 2 + 91754291 gc i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 185884 1 + 608964 -G i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2302073 2 - 31377067 GC i canFam3.chr33 C 0 I 85 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e macNem1.NW_012014355v1 19121597 0 - 19675229 C e saiBol1.JH378146 17257094 34 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e panPan2.chrUn_NW_014024201v1 92246 1262 - 190779 M a score=34789.000000 s hg38.chr3_KI270934v1_alt 32039 37 + 163458 GGTGCAGGGCCGGGTGCGTTGTGGTGCAGGGCCCGGT s panTro5.chr3 2498676 37 - 202621043 GGTGCAGGGCCGGGTGCGTTGTGGTGCAGGGCCCGGT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 14966 37 + 55620 GGTGCCGGGCCGAGTGCGTTGTGGTGCAGGGCCCGGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802474 37 - 123690457 GGTGCCGGGCCGGGTGCGTTGTGGTGCAGGGCCCGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316808 37 - 204787373 GGGGCAGGGTCCAGGGCGTGGCCATGCAGGGCCCAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192382007 37 - 192460366 GGTTCAGGGTCCAGTGTGTGGCGGTGCAGGGTCCAGT i macFas5.chr2 C 0 T 44 s chlSab2.chr15 91327873 15 + 91754291 ggtgcagggtccagg---------------------- i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 185885 23 + 608964 GGAGCAGCGT---GTGAGTTGTGGAG----------- i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e macNem1.NW_012014355v1 19121597 0 - 19675229 C e saiBol1.JH378146 17257094 34 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e canFam3.chr33 2302075 85 - 31377067 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e panPan2.chrUn_NW_014024201v1 92246 1262 - 190779 M a score=33241.000000 s hg38.chr3_KI270934v1_alt 32076 25 + 163458 GCGTGGCGGTGCAGGGCCCGGTGCG s panTro5.chr3 2498713 25 - 202621043 GCGTGGCGGTGCAGGGCCGGGTGCG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 15003 25 + 55620 GCGTGGCGGTGCAGGGCCGGGTGCG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802511 25 - 123690457 GCGTGGCAGTGCAGGGCCGACTGCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316845 25 - 204787373 GCGTTGCGGGGCAGGGTCCAGGGCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192382000 25 - 192460366 GCATTGCGGTTCAGGGTCCAGTGTG i macFas5.chr2 T 44 C 0 s macNem1.NW_012014355v1 19121597 25 - 19675229 GCATTGCGGTGCAGGGTCCAGTGTG i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91327888 3 + 91754291 ----------------------gcg i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 185908 21 + 608964 --GTGGCGA--CAGGGAACAGAGTG i otoGar3.GL873829 C 0 I 247 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e saiBol1.JH378146 17257094 34 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e canFam3.chr33 2302075 85 - 31377067 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e panPan2.chrUn_NW_014024201v1 92246 1262 - 190779 M a score=46183.000000 s hg38.chr3_KI270934v1_alt 32101 22 + 163458 TGGCGGTGCAGGGCCGGGTGCG s panTro5.chr3 2498738 22 - 202621043 TTGTGGTGCAGGGCCCGGTGCG i panTro5.chr3 C 0 T 88 s gorGor5.CYUI01001831v1 15028 22 + 55620 TTGTGGTGCAGGGTCCAGTGCG i gorGor5.CYUI01001831v1 C 0 I 42 s nomLeu3.chr11 2802536 22 - 123690457 TGGCGGTGCAGGGCCCGGTGCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316870 22 - 204787373 TGGCGATCCAGGGCCGAGCGCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192382025 22 - 192460366 TGGCGGTGCAGGGTCCAGTGCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121622 22 - 19675229 TGGCGGTGCAGGGTCCAGTGCG i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91327891 22 + 91754291 tggcggtgcagggtccagtgcg i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e saiBol1.JH378146 17257094 34 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e canFam3.chr33 2302075 85 - 31377067 I e otoGar3.GL873829 185929 247 + 608964 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e panPan2.chrUn_NW_014024201v1 92246 1262 - 190779 M a score=42464.000000 s hg38.chr3_KI270934v1_alt 32123 24 + 163458 TGGCGGTGCAGGGCCGGGTGCGTG s panTro5.chr3 2498672 24 - 202621043 TGGCGGTGCAGGGCCGGGTGCGTT i panTro5.chr3 T 88 C 0 s gorGor5.CYUI01001831v1 15092 24 + 55620 TGGTGGTGCAGGGCCGAGCGCTTT i gorGor5.CYUI01001831v1 I 42 C 0 s nomLeu3.chr11 2802558 24 - 123690457 TGGCGGTGCAGGGCCAAGAGCGCG i nomLeu3.chr11 C 0 T 115 s rheMac8.chr2 2316892 24 - 204787373 TTGCGGTGCAGGGTCCAGTGCGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192382047 24 - 192460366 TGGCGATCCAGGGCCCAGCGCGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121644 24 - 19675229 TGGCGATCCAGGGCCCAGCGCGTT i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91327913 24 + 91754291 tggcggtgcagggtccagggcgtg i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e saiBol1.JH378146 17257094 34 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e canFam3.chr33 2302075 85 - 31377067 I e otoGar3.GL873829 185929 247 + 608964 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e panPan2.chrUn_NW_014024201v1 92246 1262 - 190779 M a score=20480.000000 s hg38.chr3_KI270934v1_alt 32147 13 + 163458 GCGGTGCAGGGCC s panTro5.chr3 2498696 13 - 202621043 GTGGTGCAGGGCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 15116 13 + 55620 GCGGTGCCGGGCC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 2316916 13 - 204787373 GCGGTGCAAGGCC i rheMac8.chr2 C 0 I 6 s macFas5.chr2 192382071 13 - 192460366 GCGGGGCAGGGTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121668 13 - 19675229 GCGGGGCAGGGTC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91327937 13 + 91754291 gcggtgcagggtc i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e saiBol1.JH378146 17257094 34 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e canFam3.chr33 2302075 85 - 31377067 I e otoGar3.GL873829 185929 247 + 608964 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e nomLeu3.chr11 2802582 115 - 123690457 T e panPan2.chrUn_NW_014024201v1 92246 1262 - 190779 M a score=1903.000000 s hg38.chr3_KI270934v1_alt 32160 4 + 163458 CGGT s panTro5.chr3 2498709 4 - 202621043 CGGT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 15129 4 + 55620 GGGT i gorGor5.CYUI01001831v1 C 0 C 0 s macFas5.chr2 192382084 4 - 192460366 CAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121681 4 - 19675229 CAGG i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91327950 4 + 91754291 cagt i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e saiBol1.JH378146 17257094 34 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e canFam3.chr33 2302075 85 - 31377067 I e otoGar3.GL873829 185929 247 + 608964 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e rheMac8.chr2 2316929 6 - 204787373 I e nomLeu3.chr11 2802582 115 - 123690457 T e panPan2.chrUn_NW_014024201v1 92246 1262 - 190779 M a score=65085.000000 s hg38.chr3_KI270934v1_alt 32164 56 + 163458 GCGTTGCGGTGCAGGGCCGGGT----------------------GCGTTGCGGTGCAGGGCCCGG---------TGCGTGGCGGTGC s panTro5.chr3 2498713 56 - 202621043 GCGTGGCGGTGCAGGGCCGGGT----------------------GCGTTGTGGTGCAGGGCCCGG---------TGCGTGGCGGTGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 15133 56 + 55620 GCGTTCTGTTGCAGGGCCCAGT----------------------GCGTTGTGGTGCAGGGGCCGG---------TGCGTTGCGGTGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802467 56 - 123690457 GCGTTGCGGTGCCGGGCCGGGT----------------------GCGTTGTGGTGCAGGGCCCGG---------TGCGTGGCAGTGC i nomLeu3.chr11 T 115 C 0 s macFas5.chr2 192382088 56 - 192460366 GCGTGGCCATGCAGGGCCCAGA----------------------GCGTTGCGGTGCAGGGTCCAG---------GGCGTGGCGATCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121685 78 - 19675229 GCGTGGCCATGCAGGGCCCAGAGCGTTGCGGTGCAGGGCCCAGCGCGTTGCGGTGCAGGGTCCAG---------GGCGTAGCGATCC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91327954 58 + 91754291 gcgtggcggtgcagggccgagc----------------------gcgttgcggtgcAGGGTCCAGNNNNNNNNNNGTGTG------- i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e saiBol1.JH378146 17257094 34 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e canFam3.chr33 2302075 85 - 31377067 I e otoGar3.GL873829 185929 247 + 608964 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e rheMac8.chr2 2316929 6 - 204787373 I e panPan2.chrUn_NW_014024201v1 92246 1262 - 190779 M a score=13933.000000 s hg38.chr3_KI270934v1_alt 32220 17 + 163458 AGGGCCGAGTGCGTTGT s panTro5.chr3 2498769 17 - 202621043 AGGGCCGGGTGCGTTGT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 15189 17 + 55620 TGGGCCGAGTGCGTTGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802523 14 - 123690457 AGGGCCGACTGCGT--- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192382144 17 - 192460366 AGGGCCGAGCGCGTTGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121763 17 - 19675229 AGGGCCGAGCGCGTTGC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91328012 2 + 91754291 ---------------GC i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2302160 17 - 31377067 AAGAAGGGGTGTCCTGT i canFam3.chr33 I 85 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e saiBol1.JH378146 17257094 34 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e otoGar3.GL873829 185929 247 + 608964 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e rheMac8.chr2 2316929 6 - 204787373 I e panPan2.chrUn_NW_014024201v1 92246 1262 - 190779 M a score=49277.000000 s hg38.chr3_KI270934v1_alt 32237 50 + 163458 GGTGCCGGGCCCGGTGCGTGGCGGTGCAGGGCCCGGTGCGTGGCGGTGCA----- s panTro5.chr3 2498786 28 - 202621043 GGTGC----------------------AGGGCCCGGTGCGTGGCGGTGCA----- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93509 50 - 190779 GGTGCAGGGCCGAGTGCGTTGTGGTGCAGGGCCCGGTGCGTGGCGGTGCA----- i panPan2.chrUn_NW_014024201v1 M 1262 C 0 s gorGor5.CYUI01001831v1 15206 50 + 55620 GGTGCAGGGCCCAGTGCGTGGCGGTGGAGGGCCCAGTGCGTGGCGGTGCA----- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802537 31 - 123690457 -------------------GGCGGTGCAGGGCCCGGTGCGTGGCGGTGCA----- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192382161 28 - 192460366 ----------------------GGTGCAGGGTCCAGTGCGTGGCGGTGCA----- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121780 28 - 19675229 ----------------------GGTGCAGGGTCCAGTGCGTGGCGGTGCA----- i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91328014 28 + 91754291 ----------------------GGTGCAGGGTCCAGGGCGTGGCGGTGCA----- i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2302177 35 - 31377067 ------GGGCTT----------GGCTCGGGGCCC----CTGGGAAAGGCATCCCC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e saiBol1.JH378146 17257094 34 - 17725628 I e calJac3.chr17 73806358 678 + 74750902 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e otoGar3.GL873829 185929 247 + 608964 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e rheMac8.chr2 2316929 6 - 204787373 I a score=20483.000000 s hg38.chr3_KI270934v1_alt 32287 11 + 163458 GGGCCAAGAGA s panTro5.chr3 2498814 11 - 202621043 GGGCCAAGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93559 11 - 190779 GGGCCAAGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15256 11 + 55620 GGGCCAAGAGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802568 11 - 123690457 GGGCCAAGAGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192382189 11 - 192460366 AGGCCAAGTGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121808 11 - 19675229 AGGCCAAGTGC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91328042 11 + 91754291 GGGTCCAGTGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73807036 11 + 74750902 GAGCCGAGTGC i calJac3.chr17 I 678 C 0 s canFam3.chr33 2302212 4 - 31377067 AGGC------- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e saiBol1.JH378146 17257094 34 - 17725628 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e otoGar3.GL873829 185929 247 + 608964 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e rheMac8.chr2 2316929 6 - 204787373 I a score=108628.000000 s hg38.chr3_KI270934v1_alt 32298 36 + 163458 GCGCAGCCTCT----ACCCCCGAGCGGGGCGTGCAG-CTCG s panTro5.chr3 2498825 36 - 202621043 GTGCAGCCTCT----ACCCCTGAGCGGGGCCTGCAG-CTCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93570 36 - 190779 GTGCAGCCTCT----ACCCCTGAGCGGGGCCTGCAG-CTCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15267 36 + 55620 GCGCAGCCTCT----ACCCCCGAGCGGGGCCTGCAG-CTCG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802579 40 - 123690457 GCGCAGCCTCTTCACCCCCCGCAGCGGGGCCTGCAG-CTCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316935 37 - 204787373 GCGCAGCCTCTT---TCCCCGGAGCGGGGCCTGCAG-CTCG i rheMac8.chr2 I 6 C 0 s macFas5.chr2 192382200 37 - 192460366 GCGCAGCCTCTT---TCCCCGGAGCGGGGCCTGCAG-CTTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121819 37 - 19675229 GCGCAGCCTCTT---TCCCCGGAGCGGGGCCTGCAG-CTCG i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91328053 37 + 91754291 GCGCAGCCTCTT---TCCCCGGAGCGGGGCCTGCAG-CTCG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73807047 34 + 74750902 GGACAGCCTT-----TCCTGGGAGTCGGGCCTG-AG-CTCC i calJac3.chr17 C 0 C 0 s canFam3.chr33 2302216 31 - 31377067 -CCCAG---------GCCCCCAAGCGGCCCTCGGAGCCTCG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e saiBol1.JH378146 17257094 34 - 17725628 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e otoGar3.GL873829 185929 247 + 608964 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M a score=148628.000000 s hg38.chr3_KI270934v1_alt 32334 40 + 163458 CCGGCCTCTTCT---CCGCCTCCAGTGCAGACCCCTCCCGGCT s panTro5.chr3 2498861 40 - 202621043 CTGGCCTCTTCT---CCGCCTCCAGCGCAGACCCCTCCCGGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93606 40 - 190779 CTGGCCTCTTCT---CCGCCTCCAGTGCAGACCCCTCCCGGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15303 40 + 55620 CAGGCCTCTTCT---CCGCCTCCAGTGCAGACCCCTCCCGGCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802619 40 - 123690457 CCGGCCTCTTCT---CCGCCTCCAGTGCAGATCCCTCCCGGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2316972 41 - 204787373 CCGGCCTCTTCT--CCCGCCTCCAGTGCAGATTCCTCCAGGCT i rheMac8.chr2 C 0 I 120 s macFas5.chr2 192382237 41 - 192460366 CCGGCCTCTTCT--CCCGCCTCCAGTGCAGATTCCTCCAGGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121856 41 - 19675229 CCGGCCTCTTCT--CCCGCCTCCAGTGCAGATTCCTCCAGGCT i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91328090 41 + 91754291 CCGGCCTCTTCT--CCCGCCTCCAGTGCAGATTCCTCCCGGCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73807081 43 + 74750902 GCGGCCTCCCTTCTCCCGCCTCCAGTGCGGAGCCCTCCGGGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257128 42 - 17725628 CCGGCCTCCCTTC-CCCGCCTCCAGTGCGGGGCCCTCCCTGTG i saiBol1.JH378146 I 34 C 0 s canFam3.chr33 2302247 30 - 31377067 -------------CCCCGCCCCTGCCCCTTCCCCCCCAAGTCT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e otoGar3.GL873829 185929 247 + 608964 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M a score=32371.000000 s hg38.chr3_KI270934v1_alt 32374 12 + 163458 TCAGCCCCAGGG s panTro5.chr3 2498901 12 - 202621043 TCAGCCCCAggg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93646 12 - 190779 TCAGCCCCAggg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15343 12 + 55620 TCAGCCCCAggg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802659 12 - 123690457 TCAGCCCTGGGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192382278 12 - 192460366 TCAGTCCCGGGG i macFas5.chr2 C 0 M 584 s macNem1.NW_012014355v1 19121897 12 - 19675229 TCAGTCCCgggg i macNem1.NW_012014355v1 C 0 I 11 s chlSab2.chr15 91328131 12 + 91754291 TCAGCCCCgggg i chlSab2.chr15 C 0 I 23 s calJac3.chr17 73807124 12 + 74750902 TCAGCCTCGGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257170 11 - 17725628 TCAG-CTCCGGC i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 2302277 6 - 31377067 TGGGCC------ i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e otoGar3.GL873829 185929 247 + 608964 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e rheMac8.chr2 2317013 120 - 204787373 I a score=10317.000000 s hg38.chr3_KI270934v1_alt 32386 8 + 163458 GCGGGGTG s panTro5.chr3 2498913 8 - 202621043 gcggggtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93658 8 - 190779 gcggggtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15355 8 + 55620 gcggggtg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2802671 8 - 123690457 GCGGGGTG i nomLeu3.chr11 C 0 I 379 s macNem1.NW_012014355v1 19121920 8 - 19675229 gcaggggg i macNem1.NW_012014355v1 I 11 C 0 s chlSab2.chr15 91328166 8 + 91754291 gcaggggg i chlSab2.chr15 I 23 C 0 s calJac3.chr17 73807136 4 + 74750902 --GAGG-- i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 17257181 4 - 17725628 --GAGG-- i saiBol1.JH378146 C 0 I 1 s canFam3.chr33 2302283 7 - 31377067 GCGGGGT- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e otoGar3.GL873829 185929 247 + 608964 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e macFas5.chr2 192382290 584 - 192460366 M e rheMac8.chr2 2317013 120 - 204787373 I a score=2856.000000 s hg38.chr3_KI270934v1_alt 32394 4 + 163458 GGGG s panTro5.chr3 2498921 4 - 202621043 gggg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93666 4 - 190779 gggg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15363 4 + 55620 gggg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803058 4 - 123690457 GGGG i nomLeu3.chr11 I 379 C 0 s macNem1.NW_012014355v1 19121928 4 - 19675229 aggg i macNem1.NW_012014355v1 C 0 I 19 s chlSab2.chr15 91328174 4 + 91754291 aggC i chlSab2.chr15 C 0 I 1 s calJac3.chr17 73807141 3 + 74750902 AGG- i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17257186 3 - 17725628 AGG- i saiBol1.JH378146 I 1 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e canFam3.chr33 2302290 0 - 31377067 C e otoGar3.GL873829 185929 247 + 608964 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e cerAty1.NW_012004056v1 16355247 197 - 16847902 M e macFas5.chr2 192382290 584 - 192460366 M e rheMac8.chr2 2317013 120 - 204787373 I a score=34406.000000 s hg38.chr3_KI270934v1_alt 32398 14 + 163458 TGGTGCGGGCCCGG s panTro5.chr3 2498925 14 - 202621043 tggtgcgggccagg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93670 14 - 190779 tggtgcgggccagg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15367 14 + 55620 tggtgcgggccagg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803062 14 - 123690457 TGGTGCCGGCCGGG i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19121951 14 - 19675229 tggtgcgggccggg i macNem1.NW_012014355v1 I 19 C 0 s cerAty1.NW_012004056v1 16355452 14 - 16847902 TGGTGCGGGCCGGG i cerAty1.NW_012004056v1 M 197 C 0 s chlSab2.chr15 91328179 14 + 91754291 GGGTGCGGGCCGGG i chlSab2.chr15 I 1 C 0 s calJac3.chr17 73807144 13 + 74750902 TGGTGTGGCCCGG- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257189 13 - 17725628 TGGTGGAGCCCGG- i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 2302290 5 - 31377067 --------CCCGG- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e otoGar3.GL873829 185929 247 + 608964 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e macFas5.chr2 192382290 584 - 192460366 M e rheMac8.chr2 2317013 120 - 204787373 I a score=18386.000000 s hg38.chr3_KI270934v1_alt 32412 7 + 163458 CAGGGCG s panTro5.chr3 2498939 7 - 202621043 cagggcg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93684 7 - 190779 cagggcg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15381 7 + 55620 cagggcg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803076 7 - 123690457 CAGGGCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192382877 7 - 192460366 CAGGGCG i macFas5.chr2 M 584 C 0 s macNem1.NW_012014355v1 19121965 7 - 19675229 cagggcG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355466 7 - 16847902 CAGGGCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328193 7 + 91754291 CGGGGCG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73807157 7 + 74750902 CTGGAAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257202 7 - 17725628 CTGGCAG i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 2302295 1 - 31377067 C------ i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e otoGar3.GL873829 185929 247 + 608964 I e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e rheMac8.chr2 2317013 120 - 204787373 I a score=3321.000000 s hg38.chr3_KI270934v1_alt 32419 1 + 163458 C s panTro5.chr3 2498946 1 - 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93691 1 - 190779 c i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15388 1 + 55620 c i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803083 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192382884 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121972 1 - 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355473 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328200 1 + 91754291 C i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 186176 1 + 608964 T i otoGar3.GL873829 I 247 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e saiBol1.JH378146 17257209 0 - 17725628 C e calJac3.chr17 73807164 0 + 74750902 C e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e canFam3.chr33 2302296 0 - 31377067 C e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T e rheMac8.chr2 2317013 120 - 204787373 I a score=39706.000000 s hg38.chr3_KI270934v1_alt 32420 11 + 163458 GGGTTTGGTGC s panTro5.chr3 2498947 11 - 202621043 gggtttggtgc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93692 11 - 190779 gggtttggtgc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15389 11 + 55620 gggtttggtgc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803084 11 - 123690457 GGATTTGGTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317133 11 - 204787373 GGGTCTGGTGG i rheMac8.chr2 I 120 C 0 s macFas5.chr2 192382885 11 - 192460366 GGGTTCGGTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121973 11 - 19675229 GGGTTCGGTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355474 11 - 16847902 GGGTTCGGTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328201 11 + 91754291 GGGTTCGGTGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73807164 10 + 74750902 GTGTCTGGCA- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257209 10 - 17725628 GTGTCTGTCG- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 186177 11 + 608964 AGGTGCGGTGG i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e canFam3.chr33 2302296 0 - 31377067 C e colAng1.NW_012118932v1 7333438 965 - 7796314 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=60866.000000 s hg38.chr3_KI270934v1_alt 32431 11 + 163458 GGGCCGTGGTG s panTro5.chr3 2498958 11 - 202621043 gggccgtggTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93703 11 - 190779 gggccgtggTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15400 11 + 55620 gggccgtggTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803095 11 - 123690457 GGGCCGCGGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317144 11 - 204787373 GGGCCGCGGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192382896 11 - 192460366 GGGCCGCGGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121984 11 - 19675229 GGGCCGCGGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355485 11 - 16847902 GGGCCGCGGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328212 11 + 91754291 GGGCCGCGGTG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7334406 11 - 7796314 GGGCCGCGATG i colAng1.NW_012118932v1 M 965 C 0 s calJac3.chr17 73807174 11 + 74750902 GGTCTGCGTGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257219 11 - 17725628 GGTCCGCGGGT i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 186188 11 + 608964 CCTCCAGGGTG i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e cebCap1.NW_016107444v1 6344983 617 + 6778120 I e canFam3.chr33 2302296 0 - 31377067 C e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=38954.000000 s hg38.chr3_KI270934v1_alt 32442 6 + 163458 CCGAC-C s panTro5.chr3 2498969 6 - 202621043 CCGAC-C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93714 6 - 190779 CCGAC-C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15411 6 + 55620 CCAAC-C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803106 6 - 123690457 CCGAC-C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317155 6 - 204787373 CCGAC-C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192382907 6 - 192460366 CCGAC-C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19121995 6 - 19675229 CCGAC-C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355496 6 - 16847902 CCGAC-C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328223 6 + 91754291 CCGAC-C i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7334417 6 - 7796314 CCGAC-C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73807185 6 + 74750902 CGGAT-C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257230 5 - 17725628 -GGAT-C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6345600 6 + 6778120 CCGAC-C i cebCap1.NW_016107444v1 I 617 C 0 s otoGar3.GL873829 186199 7 + 608964 CCAATGC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2302296 3 - 31377067 ---CC-C i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e dasNov3.JH569502 2678335 312 - 6579706 I e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=96307.000000 s hg38.chr3_KI270934v1_alt 32448 16 + 163458 TGGCTTCCTCTCCGCT s panTro5.chr3 2498975 16 - 202621043 TGGCTTCCTCTCCGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93720 16 - 190779 TGGCTTCCTCTCCGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15417 16 + 55620 TGGCTTCCTCTCCGCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803112 16 - 123690457 TGGCTTCCTCTCCGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317161 16 - 204787373 TGGCTTCCTCTCCGCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192382913 16 - 192460366 TGGCTTCCTCTCCGCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19122001 16 - 19675229 TGGCTTCCTCTCCGCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355502 16 - 16847902 TGGCTTCCTCTCCGCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328229 16 + 91754291 TGGCTTCCTCTCCGCG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7334423 15 - 7796314 TGGC-TCCTCCCCGCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73807191 15 + 74750902 TGGTGTCCT-TCAGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257235 16 - 17725628 TGGCTTCCTCTTGGCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6345606 16 + 6778120 TGGCTTCGTTTCAGCT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 186206 16 + 608964 TGGCTGCGTTCTCACC i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 2302299 13 - 31377067 GGGCTCCCCATCT--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2678647 14 - 6579706 TTACTTCCTCATCT-- i dasNov3.JH569502 I 312 C 0 e proCoq1.NW_012133858v1 14775788 425 - 22200726 I e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=264732.000000 s hg38.chr3_KI270934v1_alt 32464 25 + 163458 GCCTCCCGATGCTCCAGGCCAGGAG s panTro5.chr3 2498991 25 - 202621043 GCCTCCCGATGCTCCAGGCCAGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93736 25 - 190779 GCCTCCCGATGCTCCAGGCCAGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15433 24 + 55620 GCC-CCCGATGCTCCAGGCCAGGAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803128 25 - 123690457 GCCTCCCGATGCTCCAGGCCAGGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317177 25 - 204787373 CCCTCCCGATGCTCCAGGCCAGGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192382929 25 - 192460366 CCCTCCCGATGCTCCAGGCCAGGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19122017 25 - 19675229 CCCTCCCGATGCTCCAGGCCAGGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355518 25 - 16847902 CCCTCCCGATGCTCCAGGCCAGGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328245 25 + 91754291 CCCTCCCGATGCTCCAGGCCAGGAG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7334438 25 - 7796314 CCCTCCCGATGCTCCAGGCCCGGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73807206 25 + 74750902 GCCTCCCGGAATTCCAGGCCCAGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257251 25 - 17725628 GCCTCCCTGTGTTCCAGGCCCGGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6345622 25 + 6778120 GCCTCCCCGTGCTCCAGGCCCGGAG i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14776213 25 - 22200726 GCCTCCCAATGTTCTAGACCGGGAG i proCoq1.NW_012133858v1 I 425 C 0 s otoGar3.GL873829 186223 25 + 608964 ACCCCTCAATGTTCTAGGCTGGGAG i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 2302312 24 - 31377067 GTCTCCCCACG-TCCAGGCCGGGAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2678661 25 - 6579706 GTCTCCCAATGTTCTAGGCCAGGAG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32768795 351 + 98207768 I e micMur3.chr1 88365555 517 + 114275543 I e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=1022004.000000 s hg38.chr3_KI270934v1_alt 32489 90 + 163458 ACGTTCAACGCCACCGGAGTCCTCCTGAGCCGCAACGGCTCTGAGGTCTCGGCCAGCTTCGACGGCTGGGCCACCGTCTCGGTGATCGCG s panTro5.chr3 2499016 90 - 202621043 ACGTTCAACACCACCGGAGTCCTCCTGAGCCGCAACGGCTCTGAGGTCTCGGCCAGCTTCGACGGCTGGGCCACCGTCTCGGTGATCGCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93761 90 - 190779 ACGTTCAACGCCACCGGAGTCCTCCTGAGCCGCAACGGCTCTGAGGTCTCGGCCAGCTTCGACGGCTGGGCCACTGTCTCGGTGATCGCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15457 90 + 55620 ACGTTCAACGCCACCGGAGTCCTCCTGAGCCGCAACGGCTCTGAGGTCTCGGCCAGCTTCGACGGCTGGGCCACCGTCTCGGTGATCGCG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803153 90 - 123690457 ACGTTCAACGCCACCGGAGTCTTCCTGAGCCGCAACGGCTCTGTGGTCTCGGCCAGCTTCGACGGCTGGGCCACCGTCTCGGTGACCGCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317202 90 - 204787373 ACGGTCAACGCCACCGGAGTCCTCCTGAGCCGCAACGGCTCCGTGGTCTCTGCCAGCTTCGACGGCTGGGCCGCCGTCTCGGTGATCGCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192382954 90 - 192460366 ACGGTCAACGCCACCGGAGTCCTCCTGAGCCGCAACGGCTCCGTGGTCTCTGCCAGCTTCGACGGCTGGGCTGCCGTCTCGGTGATCGCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19122042 90 - 19675229 ACGGTCAACGCCACCGGAGTCCTCCTGAGCCGCAACGGCTCCGTGGTCTCTGCCAGCTTCGACGGCTGGGCCGCCGTCTCGGTGATCGCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355543 90 - 16847902 ACGGTCAACGCCACCGGAGTCCTCCTGAGCCGCAACGGCTCCGTGGTCTCTGCCAGCTTCGACGGCTGGGCCGCCGTCTCGGTGATCGCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328270 90 + 91754291 ACGGTCAACGCCACCGGAGTCGTCCTGAGCCGCAGCGGCTCCGTGGTCTCTGCCAGCTTCGATGGCTGGGCCGCCGTCTCGGTGGTCGCG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7334463 90 - 7796314 ACGTTCAACGCCACCGGAGTCCTCCTGAGCCGCAACGGCTCCGTGGTCTCTGCCAGCTTCGACGGCTGGGCCGCCGTCTCGGTGATCGCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73807231 90 + 74750902 ACGGTCAGCGCCCCCGGAGTCCTCCTGAGCCACAGCGGCCACGAGGTCTCGGCCAGCTTCGACGGCTCTGCCACGGTCTCGGTGACGGCG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257276 90 - 17725628 ACGTTCAGCGCCCCCGGAGTCCTCCTGAGCCGCAGCGGCCCCGGGGTCTCGGCCAGCTTCGATGGCTCTGCCGCGGTCTCAGTGACCGCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6345647 90 + 6778120 ACGTTCAGCGCCCCCGGAGTCCTGCTGAGCCGCAGCGGCCCCGAGGTCTCGGCCAGCTTCGACGGCTCCGCCGCGGTCTCAGTGACCGCG i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14776238 90 - 22200726 ATATTCAATGCCACCGGGGTCCTCCTGACCCGCAACGGCTCCATGGTGTCAGCAAGCTTCGATGGGACGACAGCCATCACAGTGACCGCT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 186248 90 + 608964 ATATTCAATGCCACTGGTGTCCTCCTGACCCGCAATGGCTCCCTGGTCTCAGCCAGCTTCGACGGGACGGCAGCCATCTCAGTGACTGCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32769146 90 + 98207768 ATATTCAATACCACCGGTGTTCTGCTGACCCAAAATGGCTCCCAAGTCTCAGCCAACTTTGATGGGACAGTGACTATCTCTGTGATTGCT i mm10.chr16 I 351 C 0 s canFam3.chr33 2302336 90 - 31377067 ACATTCAACAGCACCGGCGTCACGGTGACCCGCGCGGGCTCCGTGGTGTCGGCCGCCTTCGACGGGGCGGTGGCCGTCTCGGTGAGGGCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2678686 90 - 6579706 GTATTCAACACCTCCGGTGTCATCCTGACCCGCAATGGCTCTCTGGTATCAGCCAACTTCGATGGAATGGTGACCATCTCAGTTTTGGCT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88365555 517 + 114275543 I e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=539688.000000 s hg38.chr3_KI270934v1_alt 32579 35 + 163458 CTCTCCAACATCCTCCACGCCTCCGCCAGCCTCCC s panTro5.chr3 2499106 35 - 202621043 CTGTCCAACATCCTCCACGCCTCCGCCAGCCTCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93851 35 - 190779 CTCTCCAACATCCTCCACGCCTCCGCCAGCCTCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15547 35 + 55620 CTCTCCAACATCCTCCATGCCTCCGCCAGCCTCCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803243 35 - 123690457 CTCTCCAACATCCTCCACGCCTCCGCCAGCCTCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317292 35 - 204787373 CTCTCCGACATCCTCCACGCCTCCGCCAGCCTCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192383044 35 - 192460366 CTCTCCGACATCCTCCACGCCTCCGCCAGCCTCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19122132 35 - 19675229 CTCTCCGACATCCTCCACGCCTCCGCCAGCCTCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355633 35 - 16847902 CTCTCCGACATCCTCCACGCCTCCGCCAGCCTCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328360 35 + 91754291 CTCTCCGGCATCCTCCACGCCTCCGCCAGCCTCCC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7334553 35 - 7796314 CTCTCCGCCATCCTCCACGCCTCCGCCAGCCTCCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73807321 35 + 74750902 CTCTCCAGCATCCTCCACGCCTCCGCCAGCCTCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257366 35 - 17725628 CTCTCCGGCGTCCTCCACGCGGCCGCCAGCCTCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6345737 35 + 6778120 CTCTCCAGCGCCCTCCACGCCTCCGCCAGCCTCCC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88366072 35 + 114275543 CTCTCCAACATCCTCCATGCCTCCTCCAGCCTCCC i micMur3.chr1 I 517 I 103 s proCoq1.NW_012133858v1 14776328 35 - 22200726 CTCTCCAACATCCTCCACGCCTCCTCCAGCCTCCC i proCoq1.NW_012133858v1 C 0 I 448 s otoGar3.GL873829 186338 35 + 608964 CTCTCCAACATCCTCCATGCCTTTACCAGTCTCCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32769236 35 + 98207768 CGCTCCAACATCCTTCATGCCTCCTCCAGCCTATC i mm10.chr16 C 0 C 0 s canFam3.chr33 2302426 35 - 31377067 CTGTCCAACATCCTCCACGCCTCGTGCGGCCTCCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2678776 35 - 6579706 CTCTCCAACATCCTCCATGCTTCCTCCAGCCTCCC i dasNov3.JH569502 C 0 C 0 e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=410324.000000 s hg38.chr3_KI270934v1_alt 32614 43 + 163458 GCCCGAGTACCAGAACCGCACGGAGGGGCTCCTGGGTGAGG-GC s panTro5.chr3 2499141 43 - 202621043 GCCCGAGTACCAGAACCGCACGGAGGGGCTCCTGGGTGAGG-GC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93886 43 - 190779 GCCCGAGTACCAGAACCGCACGGAGGGGCTCCTGGGTGAGG-GC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15582 43 + 55620 GCCCGAGTACCAGAACCGCACGGAGGGGCTCCTGGGTGAGG-GC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803278 43 - 123690457 ACCCGAGTACCAGAACCGCACGGAGGGGCTCCTGGGTGAGG-GC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317327 43 - 204787373 GCCCGAGTACCAGAACCGCACGGAGGGGCTCCTGGGTGAGG-GC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192383079 43 - 192460366 GCCCGAGTACCAGAACCGCACGGAGGGGCTCCTGGGTGAGG-GC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19122167 43 - 19675229 GCCCGAGTACCAGAACCGCACGGAGGGGCTCCTGGGTGAGG-GC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355668 43 - 16847902 GCCCGAGTGCCAGAACCGCACGGAGGGGCTCCTGGGTGAGG-GC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328395 40 + 91754291 GCCCGAGTACCAGGACCGCACGGAGGGGCTCCTGGGTGAG---- i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7334588 43 - 7796314 GCCCGAGTTCCAGAACCGCACGGAGGGGCTCCTGGGTGAGG-GC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73807356 43 + 74750902 GCAGGAGTATTGGAACCTCACCGAGGGCCTCCTGGGTGAGG-GC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257401 42 - 17725628 GCCGGGGTACCGGGGCCGCACCGCGGGCCTCCTGGGTGA-G-GC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6345772 43 + 6778120 GCGGGAGTACCGGGACCGCACCGAGGGCCTCCTGGGTGAGG-GC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 186373 43 + 608964 GGAAGAGTATCAAAACCACACGGAAGGCCTCTTGGGTATGA-GC i otoGar3.GL873829 C 0 M 235 s mm10.chr16 32769271 44 + 98207768 AGAGGAATATCGAAACCACACAGAGGGCCTTCTGGGTAAGATGC i mm10.chr16 C 0 I 2 s canFam3.chr33 2302461 39 - 31377067 CGCGGAGTACCGGGGGCGCACCGAGGGCCTCCTGGGTGA----- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2678811 44 - 6579706 AGAGGAGTATCAACACCACACAGAGGGCCTCCTGGGTAAGGAGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14776363 448 - 22200726 I e micMur3.chr1 88366107 103 + 114275543 I e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=124355.000000 s hg38.chr3_KI270934v1_alt 32657 18 + 163458 GGCTCGGA--CC-TGCCTCTG s panTro5.chr3 2499184 18 - 202621043 GACTCGGA--CC-TGCCTCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93929 18 - 190779 GACTCGGA--CC-TGCCTCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15625 18 + 55620 GGCTCGGA--CC-TGCCTCTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803321 18 - 123690457 GGCTCGGA--CC-TGCCTCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317370 18 - 204787373 GGCGCGCA--CC-TGCCTCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192383122 18 - 192460366 GGCGCGCA--CC-TGCCTCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19122210 18 - 19675229 GGCGCGCA--CC-TGCCTCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355711 18 - 16847902 GGCGCGCA--CC-TGCCTCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328435 18 + 91754291 GGCGCGGA--CC-TGCCTCTG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7334631 18 - 7796314 GGCGCGGA--CC-TGCCTCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73807399 18 + 74750902 GGCTCAGA--CC-TGCCTCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257443 18 - 17725628 GGCTCAGA--CC-GGCCCCGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6345815 18 + 6778120 GGCTCGGA--CC-TGCCTCTG i cebCap1.NW_016107444v1 C 0 I 256 s mm10.chr16 32769317 16 + 98207768 AGCTCAGA--CTATACCA--- i mm10.chr16 I 2 C 0 s dasNov3.JH569502 2678855 20 - 6579706 AGGTCAGAACCC-TGACTCTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14776363 448 - 22200726 I e micMur3.chr1 88366107 103 + 114275543 I e canFam3.chr33 2302500 0 - 31377067 C e otoGar3.GL873829 186416 235 + 608964 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=192476.000000 s hg38.chr3_KI270934v1_alt 32675 67 + 163458 AGGCTCCGCGGAGCCAGCCGGAGCTC----GGA---------CCCCCACGCCGGC---GGCC--CGGGCAGCCC-TGCTCGGCCTC s panTro5.chr3 2499202 67 - 202621043 AGGCTCCGCGGAGCCAGCCGGAGCTC----GGA---------CCCCCACGCCGGC---GGCC--CGGGCAGCCC-TGCTCGGCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93947 67 - 190779 AGGCTCCGCGGAGCCAGCCGGAGCTC----GGA---------CCCCCACGCCGGC---GGCC--CGGGCAGCCC-TGCTCGGCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15643 67 + 55620 AGGCTCCGCGGAGCCAGCCGGAGCTC----GGA---------CCCCCACGCCGGC---GGCC--CGGGCAGCCC-TGCTCGGCCTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803339 67 - 123690457 GGGCTATTCGGAGCCAGCCGGAGCTC----GGA---------CCCCCACGCCCGC---GGCC--CGGGCAGCCC-TGCTCGGCCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317388 64 - 204787373 AGGCTCTACGG----AGCCGGAGCTC----GGA---------CCCCCACGCCCGCG--GGCC--CGGGCAGCCC-TGCTCGGCCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192383140 64 - 192460366 AGGCTCTACGG----AGCCGGAGCTC----GGA---------CCCCCACGCCCGCG--GGCC--CGGGCAGCCC-TGCTCGGCCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19122228 64 - 19675229 AGGCTCTACGG----AGCCGGAGCTC----GGA---------CCCCCACGCCCGCG--GGCC--CGGGCAGCCC-TGCTCGGCCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355729 64 - 16847902 AGGCTCTACGG----AGCCGGAGCTC----GGA---------CCCCCACGCCCGCG--GGCC--CGGGCAGCCC-TGCTCGGCCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328453 62 + 91754291 AGGCTCTACGG----AGCCGGAGCTC----GGA---------CCCCCACGCCCGCG--GGCC--CGGGCAG--C-TGCTCGGCCTC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7334649 64 - 7796314 AGGCTCTGCGG----AGCCGGAGCTC----GGA---------CCCTCACGCCCGCG--GGCC--CGGGCAGCCC-TGCTCGGCCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73807417 39 + 74750902 TGGCTCTGCGG---CAGCAGGAGGTC----GAT---------TCCCGA-------------------------------AGGCTTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257461 12 - 17725628 GCGCTC--------------------------------------------------------------------------GGCTTC i saiBol1.JH378146 C 0 C 0 s mm10.chr16 32769333 42 + 98207768 -----------AGGCAGCTATCCCTCCTTTGGA---------CTTCC---------------------CTGCCC-TGCCCAGTT-- i mm10.chr16 C 0 C 0 s canFam3.chr33 2302500 51 - 31377067 -------------------GAAGCTG----GCA---------CCACCCTGCCCGGGGCGGCG--GGGACGAGAC-CTCTCAGCTTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2678875 78 - 6579706 AGGT--AGTGGCTGCAGCAGGAGCTC----AGAGCAAGGCAGCTTGCTTTCCCGTT--GGCCAGTGGACATCCCAGGCTGAGTTTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14776363 448 - 22200726 I e micMur3.chr1 88366107 103 + 114275543 I e cebCap1.NW_016107444v1 6345833 256 + 6778120 I e otoGar3.GL873829 186416 235 + 608964 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=277932.000000 s hg38.chr3_KI270934v1_alt 32742 38 + 163458 CCTTTCTCCGCCTCCTTGGAGCAGAACCCTTGGGGCAC s panTro5.chr3 2499269 38 - 202621043 CCTTTCTCGGCCTCCTTGGAGCAGAACCCTCGGGGCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94014 38 - 190779 CCTTTCTCCGCCTCCTTGGAGCAGAACCCTCGGGGCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15710 38 + 55620 CCTTTCTCCGCCTCCTTGGAGCAGAACCCTCGGGGCAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803406 38 - 123690457 CCTTTCTCCGCCTCCTTGGAGCAGAACCCTCGGGGCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317452 37 - 204787373 CCTTTCTCCGCCTCCTTGGAGCAGAACCCTC-GGGCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192383204 37 - 192460366 CCTTTCTCCGCCTCCTTGGAGCAGAACCCTC-GGGCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19122292 37 - 19675229 CCTTTCTCCGCCTCCTTGGAGCAGAACCCTC-GGGCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355793 37 - 16847902 CCTTTCTGCGCCTCCTTGGAGCAGAACCCTC-GGGCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328515 38 + 91754291 CCTTCCTCCGCCTCCTTGGAGCAGAGCCCTCGGGGCAC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7334713 38 - 7796314 CCTTTCTCCGCCTCCTTGGAGCAGAACCCTCGGGGCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73807456 38 + 74750902 CCTTTCCCGGCCTCCTCGGAGCAGAACCCTCGGGGCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257473 23 - 17725628 CCTGTCCCCGCCTCC---------------CGCAGCAC i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 88366210 38 + 114275543 CCTCTCTCAGCCTCCTTGGAGCAGAACCTTTAGGGCAC i micMur3.chr1 I 103 I 301 s mm10.chr16 32769375 22 + 98207768 -CTTCCTCAGTCCCCTA---------------GGGCAC i mm10.chr16 C 0 C 0 s canFam3.chr33 2302551 15 - 31377067 ----CCTGTGAGCCTTTGG------------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2678953 38 - 6579706 CCTTCCTCAGCCTCCTTGGAACAGAACCCTCAGGGTAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14776363 448 - 22200726 I e cebCap1.NW_016107444v1 6345833 256 + 6778120 I e otoGar3.GL873829 186416 235 + 608964 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=203044.000000 s hg38.chr3_KI270934v1_alt 32780 40 + 163458 AGAGCGGGCCGGGAGCCGAGGGGCTTC--TCCAGCCTCCCCC s panTro5.chr3 2499307 40 - 202621043 AGAGCGGGCGCGGAGCCGAAGGGCTTC--TCCAGCCTCCCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94052 40 - 190779 AGAGCGGGCGCGGAGCCGAAGGGCTTC--TCCAGCCTCCCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15748 40 + 55620 AGAGCGGGCCGGGAGCCGAGGGGCTTC--TCCAGCCTCCCCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803444 40 - 123690457 AGAGCGGGCCGGGAGCCGAGGGGCTTC--TCCAGCCTCCCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317489 40 - 204787373 GGAGCGGGCCGGGAGCGGAGGGGCTTC--TCCAGCCGCCACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192383241 40 - 192460366 GGAGCGGGCCGGGAGCGGAGGGGCTTC--TCCAGCCGCCACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19122329 40 - 19675229 GGAGCGGGCCGGGAGCGGAGGGGCTTC--TCCAGCCGCCACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355830 40 - 16847902 GGAGCGGGCCGGGAGCGGAGGGGCTTC--TCCAGCCGCCACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328553 40 + 91754291 GGAGCGGGCCGGGAGCGGAGGGGCTTC--TCCAGCCGCCACC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7334751 40 - 7796314 GGAGCGGGCCGGGAGCGGAGGGGCTTC--TCCAGCCTCCACC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73807494 38 + 74750902 GGAGCGGGCCTAGGG--GAGGGACTTC--TCCAGCCTCCGAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257496 37 - 17725628 CGAGCGGGCCTTGGG--G-GGGACTCC--TCCCGCCTCCGCG i saiBol1.JH378146 C 0 C 0 s mm10.chr16 32769397 26 + 98207768 AGA--------------GAGGGGCTGC--TTCACACACTGTT i mm10.chr16 C 0 C 0 s canFam3.chr33 2302566 6 - 31377067 -----------------------CTTC-------------CT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2678991 42 - 6579706 ACAATAGGCCAGGGAAGTAGGAGATTtgttttagtttcctcc i dasNov3.JH569502 C 0 I 1018 e proCoq1.NW_012133858v1 14776363 448 - 22200726 I e micMur3.chr1 88366248 301 + 114275543 I e cebCap1.NW_016107444v1 6345833 256 + 6778120 I e otoGar3.GL873829 186416 235 + 608964 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=114199.000000 s hg38.chr3_KI270934v1_alt 32820 23 + 163458 GAGGCTCCCTTCCTGTCCTCCGC s panTro5.chr3 2499347 23 - 202621043 GAGGCTCCCTTCCTGTCCTCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94092 23 - 190779 GAGGCTCCCTTCCTGTCCTCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15788 23 + 55620 GAGGCTCCCTTCCTGTCCTCCTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803484 23 - 123690457 GAGGCTCCCTTCCTGTCCTCCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317529 23 - 204787373 GAGGCACCCTTTCTGGCCACCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192383281 23 - 192460366 GAGGCACCCTTTCTGGCCACCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19122369 23 - 19675229 GAGGCACCCTTTCTGGCCACCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355870 23 - 16847902 GAGGCACCCTTTCTGGCCACCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328593 23 + 91754291 GAGGCACCCTTTCTGGTCACCTC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7334791 23 - 7796314 GGGGCACCCTTTCCGGTCACCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73807532 23 + 74750902 AAGTCTCCCTTCCTGCCCTCCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257533 22 - 17725628 GAGGCT-CCTTCCTGCCCCCATC i saiBol1.JH378146 C 0 C 0 s mm10.chr16 32769423 23 + 98207768 TAGGCTAATTTCCTGCTTGGCAT i mm10.chr16 C 0 C 0 s canFam3.chr33 2302572 13 - 31377067 AAAGCTCCGGTTC---------- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14776363 448 - 22200726 I e micMur3.chr1 88366248 301 + 114275543 I e dasNov3.JH569502 2679033 1018 - 6579706 I e cebCap1.NW_016107444v1 6345833 256 + 6778120 I e otoGar3.GL873829 186416 235 + 608964 M e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=291986.000000 s hg38.chr3_KI270934v1_alt 32843 50 + 163458 ----CCGCTCTAAGGGAGCATCAGGGG-GGGCTGCGGGGAGGC-G------GGGGGCACAG---------C s panTro5.chr3 2499370 51 - 202621043 ----CCGCGCTAAGGGAGCATCAGGGGTGGGCTGCGGGGAGGC-G------GGGGGCACAG---------C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94115 51 - 190779 ----CCGCTCTAAGGGAGCATCAGGGGTGGGCTGCGGGGAGGC-G------GGGGGCACAG---------C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15811 52 + 55620 ----CCGCTCTAAGGGAGCATCAGGGGTGGGCTGTGGGGAGGCGG------GGGGGCACAG---------C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803507 51 - 123690457 ----CCGCTCTAAGGGAGCATCAGGGATGGGCTCCGGGGAGGC-G------GGGGGCACAG---------C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317552 56 - 204787373 ----CCGCTCTAAGGGAGCATCAGGGGTGGGCTCCAGGGAGTC-GGGGGC-GGGGTCACAG---------C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192383304 56 - 192460366 ----CCGCTCTAAGGGAGCATCAGGGGTGGGCCCCGGAGAGTC-GGGGGC-GGGGTCACAG---------C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19122392 56 - 19675229 ----CCGCTCTAAGGGAGCATCAGGGGTGGGCTCCGGAGAGTC-GGGGGC-GGGGTCACAG---------C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355893 56 - 16847902 ----CCGCTCTAAGGGAGCATCAGGGGTGGGCTCCGGGGAGTC-GGGGGC-GGGGTCACAG---------C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328616 56 + 91754291 ----CCGCTCTAAGGGAGCATCAGGGGCGGGCTCCGGGGAGTC-GGGGGC-GGGGTCGCAG---------C i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7334814 57 - 7796314 ----CCGCTCTAAGGGAGCATCAGGGGTGGGCTCCGGGGAGTC-GGGGGCGGGGGGCACAG---------C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73807555 57 + 74750902 ----CCGCTCTAAGGGAGCATCAGGGGTGTGCTCCAGGGAGGCGGGGGTG-GCGGCCGCTG---------C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257555 55 - 17725628 ----CCGCCCTAAGGGAGCCTCAGGGGTGCGCCCCGGCGAGGC-GGGGTG-GGGGTTCCTG---------- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 186660 59 + 608964 ----CCACTCCAATGGAGCATCAAGGA-AGGCTCTGGACAGGA-T------GAGGGCACAGTGCCTGCCTC i otoGar3.GL873829 M 235 C 0 s mm10.chr16 32769446 50 + 98207768 -----TTTTTTAAGGGAATATGAAGGAAATGCTATGGGGAAAG-T------GGCGGCTCAG---------C i mm10.chr16 C 0 C 0 s canFam3.chr33 2302585 40 - 31377067 AGGGCAG--CCAGGGGGGCTTGGAGGATGGGCTCTGGGAA----G-------------------------c i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14776363 448 - 22200726 I e micMur3.chr1 88366248 301 + 114275543 I e dasNov3.JH569502 2679033 1018 - 6579706 I e cebCap1.NW_016107444v1 6345833 256 + 6778120 I e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=423125.000000 s hg38.chr3_KI270934v1_alt 32893 81 + 163458 CATC-CTTTCTCC--------------CTTTCCTCTTGCCT------CCCACA-------------------------------TCC-TCCCGCCCTCCTCCACCGCTGCC----------CGCGTTTCCTCCCGCCCCTCCCG s panTro5.chr3 2499421 81 - 202621043 CATC-CTTTCTCG--------------CTTTCCTCTTGCCT------CCCACA-------------------------------TCC-TCCCGCCCTCCTCCACCGGGGCC----------CGCGTTTCCCCCCGCCCCTCCCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94166 81 - 190779 CATC-CTTTCTCG--------------CTTTCCTCTTGCCT------CCCACA-------------------------------TCC-TCCCGCCCTCCTCCACCGGGGCC----------CGCGTTTCCCCCCGCCCCTCCCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15863 81 + 55620 CATC-CTTTCTCC--------------CTTTCCTCTTGCCT------CCCACA-------------------------------TCC-TCCCGCCCTCCTCCACCGCTGCC----------CGCGTTTCCTCCCGCCCCTCCCG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803558 81 - 123690457 CATC-CTTTctcc--------------ctttcctcttgcct------cccaca-------------------------------tcc-tcccgccctcctccatcgctgcc----------tgcgtttcctcccgcccctcccG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317608 80 - 204787373 CATC-CTTTGGCC--------------CTTTCCTCTTGCCT------CCCACA-------------------------------TCC-TCCCGCCCTCTTCCATGGCTGCC----------CGCG-TTCCTCCCACCCCTCCCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192383360 81 - 192460366 CATC-CTTTGGCC--------------CTTTCCTCTTGCCT------CCCACA-------------------------------TCC-TCCCTCCCTCCTCCATGGCTGCC----------CGAGTTTCCTCCCACCCCTCCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19122448 81 - 19675229 CATC-CTTTGGCC--------------CTTTCCTCTTGCCT------TCCACA-------------------------------TCC-TCCCGCCCTCCTCCATGGCTGCC----------CGAGTTTCCTCCCACCCCTCCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16355949 80 - 16847902 CATC-CTTTGGCC--------------CTTTCCTCTTGCCT------CCCACA-------------------------------TCC-TCCCGCCCTCCTCCATGGCTGCC----------CGCG-TTCCTCCCACCCCTCCCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328672 80 + 91754291 CATC-CTTTGGCC--------------CTTTCCTCTGGCCT------CCCACA-------------------------------TCC-TCCCGCCCTCCTCCATGGCTGCC----------CGCG-TTCCTCCCACCCCTCCCG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7334871 81 - 7796314 CATC-CTTTCGCC--------------CTTTCCTCTTGCCT------CCCACA-------------------------------TCC-TCCCGCCCTCCTCCATGGCTGCC----------CGCGTTTCCTCCCACCCCTCCCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73807612 81 + 74750902 CGTC-C-TTCCTC--------------CTTTCTTCTTGCCT------CCCACA-------------------------------TCCTTCCTGTCCTCCTGTATCTCTGCC----------AGTGTTTCCCGCCGACCCTCCCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257610 71 - 17725628 CGTC-C--TCCTC--------------CTTCCTCCCTGCCC------CCTACG-------------------------------TCCCTCCCGTCC-CCGGCA--TCTGCC----------CGCATTCCCTGCAGACC------ i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 186719 96 + 608964 CTTC-CTCTACCCTTCTGTCTCTCCATCCTTCCCTCTGTTC------CTCACA-------------------------------TTTCTCTTGCCTGCCTCAAGCTCCTGT----------TGTGCTTTCTTCTGCCCCTCTCC i otoGar3.GL873829 C 0 I 2 s mm10.chr16 32769496 111 + 98207768 TTTCtccttcctc--------------ccctccccttccct------tccctacttttcctgtttttagtcttgtctccttccttcc-tcccatcttcccccacattcttc----------ttggctttcttctcctttttt-- i mm10.chr16 C 0 C 0 s canFam3.chr33 2302625 59 - 31377067 cctc-c---------------------------------ct------cccgcg-----------------------------------ccccttcttcctccacccccgcc----------tccatttcccctcttcatccccG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2680051 95 - 6579706 CATC-CCTCACAC--------------CTTTCCTTTCTCCTTATCTGCCCACA-------------------------------TAC--CTTCTCTTCTTCCATTTCCTCCATTTTCTCATCGAACCTCTTCCCTCCCTCCCT- i dasNov3.JH569502 I 1018 C 0 e proCoq1.NW_012133858v1 14776363 448 - 22200726 I e micMur3.chr1 88366248 301 + 114275543 I e cebCap1.NW_016107444v1 6345833 256 + 6778120 I e manLeu1.NW_012102020v1 1388389 4962 + 1977891 T a score=229303.000000 s hg38.chr3_KI270934v1_alt 32974 33 + 163458 AAGGCAGACGGG-CAGGGTGTGAGGGCCCG-TCCT--- s panTro5.chr3 2499502 33 - 202621043 AAGGCAGATGGG-CAGGGTGTGAGGGCCCG-TCCT--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94247 33 - 190779 AAGGCAGATGGG-CAGGGTGTGAGGGCCCG-TCCT--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15944 33 + 55620 AAGGCAGATGGG-TAGGGTGTGAGGGCCCG-TCCT--- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803639 33 - 123690457 AAGGCAGACGGG-CAGGGTGTGAGGGCCCG-TCCT--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317688 33 - 204787373 GAGGCAGCTGGG-CAGGGTGTGAGGGCCCG-TCCT--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192383441 33 - 192460366 AAGGCAGCCGGG-CAGGGTGTGAGGGCCCG-TCCT--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19122529 30 - 19675229 AAGGCAGCCGGG-CAGGGTGTGAGGGCCCG----T--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16356029 33 - 16847902 AAGGCAGCCGGG-CAGGGTGTGAGGGCCGG-TCCT--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328752 33 + 91754291 GAGGCAGCCGCG-CAGGCTGTGAGGGCCCG-TCCT--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1383427 33 + 1977891 AAGGCAGCCGGG-CAGGGTGTGAGGGCCGG-TCCT--- i manLeu1.NW_012102020v1 T 4962 C 0 s colAng1.NW_012118932v1 7334952 31 - 7796314 AAGGCAGACCGG-CAGG--GTGAGGGCCCG-TCGT--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73807693 33 + 74750902 -AAGCAGAGGGG-CAGCGCATGAAGGCCCGGTCCT--- i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 186817 33 + 608964 AAAGCAGAGGGG-CAGG-TGTGAGGGCCTGGTCCC--- i otoGar3.GL873829 I 2 I 5 s mm10.chr16 32769607 34 + 98207768 AAAGCACAATGG-CAGGGTATGAGTGCATGGTCCT--- i mm10.chr16 C 0 C 0 s canFam3.chr33 2302684 31 - 31377067 -GGACAGA-GGG-TGGGCTATGAGGTACGG-TCCT--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2680146 38 - 6579706 AAAGCAGAGGGGCCAGATTTTGAGGTCATGGTCTTGTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14776363 448 - 22200726 I e micMur3.chr1 88366248 301 + 114275543 I e saiBol1.JH378146 17257681 0 - 17725628 C e cebCap1.NW_016107444v1 6345833 256 + 6778120 I a score=729917.000000 s hg38.chr3_KI270934v1_alt 33007 109 + 163458 CCCGGCTCCCCTGGAGGCCTGACAGCAGG--TGCAAGAG-CAGAGGCTG-CC--AGGCCCTGGCCTCTCCCCACTGCGT---------CCGCCGGATGCTCCCCAGGAAGGGGACAGCCGCGTG s panTro5.chr3 2499535 109 - 202621043 CCCGGCTCCCCTGGAGGCCTGATAGCAGG--TGTAAGAG-CAGAGGCTG-CC--AGGCCCTGGCCTCTCCCCACTGCGT---------CCGCCGGATGCTCCCCAGGAAGGGGACAGCTGCGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94280 109 - 190779 CCCGGCTCCCCTGGAGGCCTGATAGCAGG--TGCAAGAG-CAGAGGCTG-CC--AGGCCCTGGCCTCTCCCCACTGCGT---------CCGCCGGATGCTCCCCAGGAAGGGGACAGCTGCGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 15977 109 + 55620 CCCGGCTCCCCTGGAGGCCTGACAGCAGG--TGCAAGAG-CAGAGGCTG-CC--AGGCCCTGGCCTCTCCCCACTGCGT---------CCGCCGGATGCTCCCCAGGAAGGGGACAGCCGCGTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803672 109 - 123690457 CCCGGCTCCCCTGGAGGCCTGACAGCAGG--TGCAGGAG-CAGAGGCTG-CC--AGGCCCTGGCCTCTCCCCACTGCGT---------CCTCCGGATGCTCCCCAGGAAGGGGACAGCCGTGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317721 109 - 204787373 CCCGGCTCCCCTGGAGGCCTGACAGCAGG--TGCGACGG-CAGAGGCTG-CC--AGGCCCTGGCCTCTCCCCACTGCGT---------TCACTGGATGCTCCCCAGGAAGGGGACAGCTGTGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192383474 109 - 192460366 CCCGGCTCCCCTGGAGGCCTGACAGCAGG--TGCGACGG-CAGAGGCTG-CC--AGGCCCTGGCCTCTCCCCAGGGCGT---------TCACTGGATGCTCCCCAGGAAGGGGACAGCTGTGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19122559 109 - 19675229 CCCGGCTCCCCTGGAGGCCTGACAGCAGG--TGCGACGG-CAGAGGCTG-CC--GGGCCCTGGCCTCTCCCCACTGCGT---------TCACTGGATGCTCCCCAGGAAGGGGACAGCTGTGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16356062 109 - 16847902 CCCGGCTCCCCTGGAGGCCTGACAGCAGG--TGCCACGG-CCGAGGCTG-CC--AGGCCCTGGCCTCTCCCCACTGCGT---------TCACTGGATGCTCCCCAGGAAGGGGACGGCTGTGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328785 108 + 91754291 CCCGGCTCCCCTGGAGGCCTGACAGCAGG--TGCCACGA-CAGAGGCTG-CC--AGGCCCTGGCCTCT-CCCACTGTGT---------TCACTGGATGCTCCCCAGGAAGGGGACAGCTGTGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1383460 109 + 1977891 CCCGGCTCCCCTGGAGGCCTGACAGCAGG--TGCGACGG-CCGAGGCTG-CC--AGGCCCTGGCCTCTCCCCACTGCGT---------TCACTGGATGCTCCCCAGGAAGGGGACAGCTGTGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7334983 98 - 7796314 CCCGGCTCCCCTGGAGGCCTGACAGCAGG--TGCAACGG-CAGAGGCT--------------GCCTCTCCCCACTGCTT---------TCACTGGATGCTCCCCAGAAACGGGACAGCTGTGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73807726 108 + 74750902 CCGGGTTCCCCTGGAGGCCTGACAGCAGG--TGCAAAGG-CAGAGGCTG-CC--AGGTCCTGGCTGCTCCTCCCTGCAT---------CCCCC-GATGCTCGAGGGGAAGGGGACAGCCGAATG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257681 84 - 17725628 ----------------------CAGCAGG--TGCAGAGG-CAGAGGCCG-CC--GGTCCCTGGCCGCTCCTCCCTGCGT---------CCCCC-GATGCTCCA--GGAAGGGGACAGCCGCGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6346089 106 + 6778120 CCCAGCTCCCCTGGAGGCCTGACCGCAGG--TGCAAAGG-CAGAAGCT---C--GGGTCCCGGCCGCTCCTCCCTGCGT---------CCCCC-GATGCGGGCCGGGAAGGGGACAGCCGCGTG i cebCap1.NW_016107444v1 I 256 C 0 s otoGar3.GL873829 186855 88 + 608964 CCCATCCCTCTCCCAAGCCTGAGAACAGA--TG------------GTTGCCC--AGGCCCCACCTACTCCTTA-TGTCT---------CCAGTGT----------GACAATGGAGACCCATCTT i otoGar3.GL873829 I 5 C 0 s mm10.chr16 32769641 76 + 98207768 CTCCCACCTCCTGGAA--CCGACCCTAGGCCTGGGACAG-TTGCAGCTG-CC------------------------------------CCATTGAATGC-CCCCGGGAGAAGGTGAG------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2302715 73 - 31377067 CTCTCCTCCCCCGGAAG------GACTGG--GCCAAGGA-CAGATGCAA-CT--GGA------------------------------------AGGGGTTTCCCTCGGGGGGAGCCACAGT--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2680184 90 - 6579706 CCCTGCT--CCTGGAGG-------ACAGA--TGCAACAGAAAGAGGTTT-CCCAGGGCCCCACCTACTCTTTACATCTTGAATATGACCTATTTGATGCTCC---------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14776363 448 - 22200726 I e micMur3.chr1 88366248 301 + 114275543 I a score=2357114.000000 s hg38.chr3_KI270934v1_alt 33116 148 + 163458 CCCAGGGTGGCCAACCTCCCACT----CTGTCCCTCAGGGGTCTGGAATAACAATCCAGAGGACGACTTCAGGATGCCCAATGGCTCCACCATTCCCCCAGGGAGCCCTGAGGAGATGCTTTTCCACTTTGGAATGACCTGTGAGTCTGGGC s panTro5.chr3 2499644 148 - 202621043 CCCAGGGTGGCCAACCTCCCACT----CTGTCCCTCAGGGGTCTGGAATAACAATCTGGAGGACGACTTCAGGATGCCCAATGGCTCCACCATTCCCCCAGGGAGCCCTGAGGAGATGCTTTTCCACTTTGGAATGGCCTGTGAGTCTGGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94389 148 - 190779 CCCAGGGTGGCCAACCTCCCACT----CTGTCCCTCAGGGGTCTGGAATAACAATCTGGAGGACGACTTCAGGATGCCCAATGGCTCCACCATTCCCCCAGGGAGCCCTGAGGAGATGCTTTTCCACTTTGGAATGGCCTGTGAGTCTGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 16086 148 + 55620 CCCAGGGTGGCCAACCTCCCACT----CTGTCCCTCAGGGGTCTGGAATAACAATCCGGAGGACGACTTCAGGATGCCCAATGGCTCCACCATTCCCCCAGGGAGCCCTGAGGAGATGCTTTTCCACTTTGGAATGACCTGTGAGTCTGGGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803781 148 - 123690457 CCCAGGGTGGCCAACCTCCCACT----CTGTCCTTCAGGGCTCTGGAATAACAATCCGGAGGACGACTTCAGGATGCCCAATGGCTCCACCATCCCCCCAGGGAGCCCTGAGGAGATGCTTTTCCACTATGGAATGACCTGTGAGTCTGGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317830 152 - 204787373 CCCAGGGTGGCCAACCTCCCACTCTGACTGTCCCTCAGGAGTCTGGAATAACAATCCGGAGGACGACTTCAGGATGCCCAATGGCTCCACCGTCCCCCCAGGGAGCTCTGAGGAGACGCTTTTCCACTACGGAATGACCTGTGAGTCTGGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192383583 152 - 192460366 CCCAGGGTGGCCAACCTCCCACTCTGACTGTCCCTCAGGAGTCTGGAATAACAATCCGGAGGACGACTTCAGGATGCCCAATGGCTCCACCGTCCCCCCAGGGAGCTCTGAGGAGACGCTTTTCCACTACGGAATGACCTGTGAGTCTGGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19122668 152 - 19675229 CCCAGGGTGGCCAACCTCCCACTCTGACTGTCCCTCAGGAGTCTGGAATAACAATCCGGAGGACGACTTCAGGATGCCCAATGGCTCCACCGTCCCCCCAGGGAGCTCTGAGGAGATGCTTTTCCACTACGGAATGACCTGTGAGTCTGGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16356171 152 - 16847902 CCCAGGGTGGCCAACCTCCCACTCTGACTGTCCCTCAGGAGTCTGGAATAACAATCCGGAGGACGACTTCAGGATGCCCAATGGCTCCACCGTCCCCCCAGGGAGCTCTGAGGAGACGCTTTTCCACTACGGAATGACCTGTGAGTCTGGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91328893 152 + 91754291 CCCAGGGTGGCCAACCTCCCACTCTGACTGTCCCTCAGGAGTCTGGAATAACAATCCGGAGGACGACTTCAGGATGCCCAATGGCTCCACCGTTCCCCCAGGGAGCTCCGAGGAGACGCTTTTCCACTACGGAATGACCTGTGAGTCTGGGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1383569 152 + 1977891 CCCAGGGTGGCCAACCTCCCACTCTGACTGTCCCTCAGGAGTCTGGAATAACAATCCGCAGGACGACTTCAGGATGCCCAATGGCTCCACCGTGCCCCCAGGGAGCTCTGAGGAGACGCTTTTCCACTACGGAATGACCTGTGAGTCTGGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7335081 148 - 7796314 CCCGGGGTGGCCAACCTCCCACT----CTGTCTCTCAGGAGTCTGGAATAACAATCCCGAGGACGACTTCCGGATGCCCAATGGCTCCATCATTCCCCCAGGGAGCTCTGAGGAGATGCTTTTCCACTACGGAATGACCTGTAAGTCTGGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73807834 148 + 74750902 CCCAGCGTGGCCAACCTCCCACT----CTGTCCCTCAGGGATCTGGAATAACAATCCGGAGGACGACTTCAGGATGCCCAATGGCTCCACCATTCCCCCAAGTAGCTCTGAGGCCACGCTTTTCCACTATGGAATGACCTGTGAGTCTGGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257765 148 - 17725628 CCCAGCGTGGCCGACCTCCCACT----CTGTCCCTCAGGGATCTGGAATAACAACCCGGAGGACGACTTCAGGATGCCCAATGGCTCCACCATTCCCCCAAGCAGCTCTGAGGCCATGCTTTTCCACTATGGAATGACCTGTGAGTCTGGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6346195 148 + 6778120 CCCAGCGTGGCCAACCTCCCACT----CTGTCCCTCAGGGATCTGGAATGACAACCCGGAAGACGACTTCAGGATGTCCAACGGCTCCGCCATTCCCCTGAGCAGCTCTGAGGCCACGCTTTTCCGCTATGGAATGACCTGTGAGTCTGGGC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88366549 148 + 114275543 CCCAGGGTGGTCAACCTCCTGCT----CTGTCCCTTAGGGGTCTGGAACGACAATCCAGAAGATGACTTCAGGATGCCCAATGGCTCCACCCTTTCCCCAGAGAGCTCTGAGGAGACGCTTTTTCACTACGGAATGACCTGTGAGTCTGGGC i micMur3.chr1 I 301 I 142 s proCoq1.NW_012133858v1 14776811 148 - 22200726 CCCGGGGTGGCCGACCTCCTGCT----CTGTCCCTCAGGGGTCTGGAATGACAATCCAGAAGACGACTTCAGGATGCCCAATGGCTCCACCTTTTCCCGAGGGAGCTCTGAGGAGGCGCTTTTTCACTACGGAATGACCTGTGAGTCTGGGC i proCoq1.NW_012133858v1 I 448 I 142 s otoGar3.GL873829 186943 148 + 608964 CCCAGGGTGGCCAAATTACTACT----CTGTTCCCCAGGGGTCTGGAATGACAACCCAGAAGATGACTTCAGGATGCCCAATGGGTCTACCTTACCCGGAAACAGCTCAGAGGAGATACTTTTTCACTATGGAATGACCTGTGAGTCTGGAC i otoGar3.GL873829 C 0 I 3 s mm10.chr16 32769717 146 + 98207768 CCTGTGGTATCGAACCTCCTGCT----CTGTCTCACAGGAGTGTGGAATGACAATCCAGAAGATGACTTCAGGATGCCCAATGGCTCCACCATTCCCTCAAACAGCTCTGAGGAGACCCTTTTCTACTATGGAATGACATGTGAGTCTGG-- i mm10.chr16 C 0 C 0 s canFam3.chr33 2302788 146 - 31377067 CCCAGGATGGCCAACCTCCTGTT----CTGTCCCTCAGGAGTTTGGAATGGCAATCCAGGAGACGACTTCAGGATGCCCAATGGCTCCAGCATTCCCGGCAATAGCAGCGAGGCCTCACTTTTTCACTACGGAATGACCTGTGAGTGAGG-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2680274 132 - 6579706 ----------------TTCTACT----CTATCCCTCAGGGGTCTGGAATGGCAATCCAGATGATGACTTCAGGATGCCCAATGGTTCCATCATTCCCCAAGGGAGCACTGAGGAGACAATTTTTCACTATGGAATGACCTGTAAGTCTGGGC i dasNov3.JH569502 C 0 I 3 a score=883006.000000 s hg38.chr3_KI270934v1_alt 33264 116 + 163458 AGGGTCC------------------------------------------------------------------------T-GGGGCAG-AGGGGCAGGT---------------GAG---GGGAGCCGGTATGTTTAT-GTCGTCCCCCTCGGCCCTGTAGGAAGCAGACCTCCATCCTCCCTAAGG--------------------------TCTGAGGAATCTG-TG-CCCCCCC s panTro5.chr3 2499792 116 - 202621043 AGGGCCC------------------------------------------------------------------------T-GGGGCAG-AGGGGCAGGT---------------GAG---GGGAGCTGCTATGTTTAT-GTCGTCCCCCTCGGCCCTGTGGGAAGCAGACCTCCATCCTCCCTAAGG--------------------------TCTGAGGAATCTG-TG-CCCCCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94537 117 - 190779 AGGGCCC------------------------------------------------------------------------T-GGGGCAG-AGGGGCAGGT---------------GAG---GGGAGCTGCTATGTTTAT-GTCGTCCCCCTCGGCCCTGTAGGAAGCAGACCTCCATCCTCCCTAAGG--------------------------TCTGAGGAATCTG-TGCCCCCCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 16234 116 + 55620 AGGGTCC------------------------------------------------------------------------T-GGGGCAG-AGGGGCAGGT---------------GAG---GGGAGCCGGTATGTTTAT-GTCATCCCCCTCGGCCCTGTAGGAAGCAGACCTCCATCCTCCCTAAGG--------------------------TCTGAGGAATCTG-TG-CCCCCCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2803929 116 - 123690457 AGGGTCC------------------------------------------------------------------------T-GGGGCAG-AGGGGCAGGT---------------GAG---GGGAGCCGGTATGTTTAT-GTCGTCCCCCTCGGCCCTGTAGGAAGCAGACCTCCATCCTCCCTAAGG--------------------------TCTGATGAATCTG-TG-CCCCCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2317982 117 - 204787373 AGGGTCT------------------------------------------------------------------------C-GGGGCAGAAGGGGCAGGT---------------AAG---GAGAGCCAGTGTGTTTAG-GTCGTCCCCCTCAGCCCTGTAGGAAGCAGACCTCCATCCTCCCTAAGG--------------------------TCCGAGGAATCTG-TG-CCCCCCC i rheMac8.chr2 C 0 I 10 s macFas5.chr2 192383735 117 - 192460366 AGGGTCT------------------------------------------------------------------------C-GGGGCAGAAGGGGCAGGT---------------AAG---GAGAGCCAGTGTGTTTAG-GTCGTCCCCCTCAGCCCTGTAGGAAGCAGACCTCCATCCTCCCTAAGG--------------------------TCCGAGGAATCTG-TG-CCCCCCC i macFas5.chr2 C 0 I 10 s macNem1.NW_012014355v1 19122820 117 - 19675229 AGGGTCT------------------------------------------------------------------------A-GGGGCAGAAGGGGCAGGT---------------AAG---GAGAGCCAGTGTGTTTAG-GTCGTCCCCCTCAGCCCTGTAGGAAGCAGACCTCCATCCTCCCTAAGG--------------------------TCCGAGGAATCTG-TG-CCCCCCC i macNem1.NW_012014355v1 C 0 I 10 s cerAty1.NW_012004056v1 16356323 117 - 16847902 AGGGTCT------------------------------------------------------------------------C-GGGGCAGAAGGGGCAGGT---------------AAG---GAGAGCCAGTGTGTTTAG-GTCGTCCCCCTCAGCCCTGTAGGAAGCAGACCTCCATCCTCCCTAAGG--------------------------TCCGAGGAATCTG-TG-CCCCCCC i cerAty1.NW_012004056v1 C 0 I 10 s chlSab2.chr15 91329045 117 + 91754291 AGGGTCT------------------------------------------------------------------------T-GGGGCAGAAGGCGCAGGT---------------AAG---GAGAGCCAGTGTGTTTAG-GTCGTCCCGCTCAGCCCTGTAGGAAGCAGACCTCCATCCTCCCTGAGG--------------------------TCTGGGGAATCTG-TG-CCCCCCC i chlSab2.chr15 C 0 I 9 s manLeu1.NW_012102020v1 1383721 117 + 1977891 AGGATCT------------------------------------------------------------------------C-GGGGCAGAAGGGGCAGGT---------------AAG---GAGAGCCAGTGTGTTTAG-GTCGTCCCCCTCAGCCCTGTAGGAAGCAGACCTCCATCCTCCCTAAGG--------------------------TCCGAGGAATCTG-TG-CCCCCCC i manLeu1.NW_012102020v1 C 0 I 10 s colAng1.NW_012118932v1 7335229 117 - 7796314 AGGGTCT------------------------------------------------------------------------T-GGGGCAGAAGGGGCAGGT---------------AAG---GAGAGTCAGTATGTTTAG-GTCGTCCCCCTCAGCCCTGTAGGAAGCAGACCTCCATCCTCCCTAAGA--------------------------TCTGAGGAATCTA-TG-CCCCATC i colAng1.NW_012118932v1 C 0 I 9 s calJac3.chr17 73807982 129 + 74750902 AGAGTCC------------------------------------------------------------------------T-GGGGCAGATAGGGCAGATGGGGCAGGCCAGGTAGAG---GGGAGCTGGTATGTTTAT-GTCGTCTCCCTCGGGCCTGTAGGAAGCAGA---CCATCCTTCGTAAGG--------------------------TCTGAGGAATCTA-TG-CTATCCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17257913 200 - 17725628 AGAGTCCtggggcaggtggggcaggtggggcaggtggggcaggtggggtaggtggggcaggtggggcaggtggggcaggt-ggggcaggtggggcaggtggggcaggccaggctgag---gggagctggCATGTTCCT-GTCATCTCCCTGGGGCCTGTAGGAAGCAGA---CCGTCTTTCGCAAGG--------------------------TCTGAGGAATCTG-TG-CTA-CCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6346343 123 + 6778120 AGAGTCC---------------------------------------------------------------tggggcagat-agggcagatggggcagatggggcagGCCGGGCTGAG---GTGAGCCGGTGTGCTCCT-GTCGCCTCCCTCGGGCCTGTAGGAAGC------------------AGG--------------------------TCGGAGGGGTCTG-TG-CTGCCCC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 187094 117 + 608964 ACCATCC------------------------------------------------------------------------T-GGGGCAGATGGGGCAGGCTGGGA----------TGA---GGGAGCTGGGATGCT-------GTCACCCCCAGGTCTATAGGAACCAGAATTCCATCCTTTGTAAGG--------------------------TCTGAGGATTCTGATG-CCACTCC i otoGar3.GL873829 I 3 I 1 s mm10.chr16 32769863 111 + 98207768 -GGGTCC------------------------------------------------------------------------T-CAGGCCACTGGGGCAGGT---------------CAGTGAGGGAGCTGCTGTGTT-------GTCTCCCTTATGCTTGTAGGATCT---TATGCATCCTTGGGAAGG--------------------------TCTGAAGACCTTGCCA-CTGTCCC i mm10.chr16 C 0 C 0 s canFam3.chr33 2302934 144 - 31377067 AGGGCTT------------------------------------------------------------------------G-AGGGTCCTCGGGGCAGGT---------------GCG---GCTGGGCGGGATGGAAAGCGTCGTGTCCCTCAGGCCTGTGGGA-CCGGACCTCCATCCTTTGTGAGGGAGGAGTGGAAAGGCCAGGAGGAAGTGCTGAGGATTCTGGTG-CGGTCCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2680409 71 - 6579706 AGTGTCC------------------------------------------------------------------------TCAAGGCATATGGGGCAGGG---------------CCA---GGA---------------------------------TGAGGGAGGCAGG----------------AG--------------------------ACTGAGGATTCTGATG-CCATCCG i dasNov3.JH569502 I 3 C 0 e proCoq1.NW_012133858v1 14776959 142 - 22200726 I e micMur3.chr1 88366697 142 + 114275543 I a score=83395.000000 s hg38.chr3_KI270934v1_alt 33380 14 + 163458 AGGGCTGTCCCCA-C s panTro5.chr3 2499908 14 - 202621043 AGGGCTGTCCCCA-C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94654 14 - 190779 AGGGCTGTCCCCA-C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 16350 14 + 55620 AGGGCTGTCCCCA-C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2804045 12 - 123690457 AGGGCTGTCCC---C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318109 13 - 204787373 AGGACTGTCCCCC-- i rheMac8.chr2 I 10 C 0 s macFas5.chr2 192383862 13 - 192460366 AGGACTGTCCCCC-- i macFas5.chr2 I 10 C 0 s macNem1.NW_012014355v1 19122947 13 - 19675229 AGGACTGTCCCCC-- i macNem1.NW_012014355v1 I 10 C 0 s cerAty1.NW_012004056v1 16356450 13 - 16847902 AGGACTGTCCCCC-- i cerAty1.NW_012004056v1 I 10 C 0 s manLeu1.NW_012102020v1 1383848 13 + 1977891 AGGACTGTCCCCC-- i manLeu1.NW_012102020v1 I 10 C 0 s colAng1.NW_012118932v1 7335355 14 - 7796314 AGGACTGTCCCCTC- i colAng1.NW_012118932v1 I 9 C 0 s calJac3.chr17 73808111 14 + 74750902 AGGTCTGTCCCCT-C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17258113 14 - 17725628 AGGCCTGTCCCCT-C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6346466 14 + 6778120 AGGTCTGTCCCCT-C i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 187212 14 + 608964 AGATTTGTCCCCT-C i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32769974 12 + 98207768 ATGTCTGTCCCC--- i mm10.chr16 C 0 C 0 s canFam3.chr33 2303078 13 - 31377067 AGACTTGTCCCCC-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2680480 14 - 6579706 AGATTTGTCCCTT-C i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14776959 142 - 22200726 I e micMur3.chr1 88366697 142 + 114275543 I e chlSab2.chr15 91329162 9 + 91754291 I a score=44295.000000 s hg38.chr3_KI270934v1_alt 33394 10 + 163458 CACCACCAGC s panTro5.chr3 2499922 10 - 202621043 CACCACCAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94668 10 - 190779 CACCACCAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 16364 10 + 55620 CACCACCAGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2804057 10 - 123690457 CCCCACCAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318122 10 - 204787373 CAGGACCAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192383875 10 - 192460366 CAGGACCAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19122960 10 - 19675229 CAGGACGAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16356463 10 - 16847902 CAGGACCAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329171 10 + 91754291 CAGGACCAGC i chlSab2.chr15 I 9 C 0 s manLeu1.NW_012102020v1 1383861 10 + 1977891 CAGGACCAGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7335369 10 - 7796314 CACCACCAGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73808125 10 + 74750902 CACTGCCATC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17258127 10 - 17725628 CACGGCCAAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6346480 10 + 6778120 CGCTGCCAAC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 187226 9 + 608964 CATCCCATG- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32769986 10 + 98207768 TGCTCCCACC i mm10.chr16 C 0 C 0 s canFam3.chr33 2303091 10 - 31377067 GACTCCCATC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2680494 10 - 6579706 CACCCCCATG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14776959 142 - 22200726 I e micMur3.chr1 88366697 142 + 114275543 I a score=445617.000000 s hg38.chr3_KI270934v1_alt 33404 43 + 163458 CCACCTGCCTCTCTCTACCTGGAGGAGAGAATGGGGGACGTGG s panTro5.chr3 2499932 43 - 202621043 CCACCTGCCTCTCTCTACCTGGAGGAGAGAATGGGGGACGTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94678 43 - 190779 CCACCTGCCTCTCTCTACCTGGAGGAGAGAATGGGGGACGTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 16374 43 + 55620 CCACCTGCCTCTCTCTACCTGGAGGAGAGAATGGGGGACGTGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2804067 43 - 123690457 CCACCTGCCTCTCTCTACCTGGAGGAGAGAATGGAGGACGTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318132 43 - 204787373 GCACCTGCCTTTCTCTAGCTGGAGGAGAGAATGGGGTAGGTTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192383885 43 - 192460366 GCACCTGCCTTTCTCTAGCTGGAGGAGAGAATGGGGTAGGTCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19122970 43 - 19675229 GCACCTGCCTTTCTCTAGCTGGAGGAGAGAATGGGGTAGGTCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16356473 43 - 16847902 GCACCTGCCTTTCTCTAGCTGGAGGAGAGAATGGGGTAGGTCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329181 43 + 91754291 GCACCTGCCTTTCTCTAGCTGGAGGAGAGAATGGGGTAGGTCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1383871 43 + 1977891 GCACCTGCCTTTCTCTAGCTGGAGGAGAGAATGGGGTAGGTCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7335379 43 - 7796314 ACACCTGCCTTTCTCTAGCTGGAGGAGAGAATGGGGTAGGTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73808135 40 + 74750902 CCACCTGTA--TCTCTACCTGGAGGAGAGAAGGGCG-GGGTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17258137 41 - 17725628 CCACCTGCGCCTCTCCACCTGGAGGAGGGAAGGGC--GGCTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6346490 42 + 6778120 CCAGCTGTATCTCTCTACCTGGGGAAGAGCAGGGCG-GGGTGG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88366839 43 + 114275543 CCACCTGCATCTCTCTACCTGGAAGAGAGAATGGGGAACATGG i micMur3.chr1 I 142 I 164 s proCoq1.NW_012133858v1 14777101 43 - 22200726 CCACCTGCATCTCTCTACCTGGAAGAGAGGATGGGGAACGTGG i proCoq1.NW_012133858v1 I 142 I 164 s otoGar3.GL873829 187235 42 + 608964 CCACCACTGTC-CTCTACCTGAAAGAGAGGATAGGGGATGTGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32769996 40 + 98207768 CTAGCTGCACGTCTCTTCCAGGAAAGGAGGAAAGGAGTGG--- i mm10.chr16 C 0 C 0 s canFam3.chr33 2303101 43 - 31377067 CCATCTGCGCTTCTCTACCTGGAAGAGGAGACAAGGGCAGGGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2680504 40 - 6579706 CCAACCGCC--TCTCTACCCGGAAGGCAGGACAGGG-AAATGG i dasNov3.JH569502 C 0 C 0 a score=1256010.000000 s hg38.chr3_KI270934v1_alt 33447 160 + 163458 -AGTGTCCTCTCTCACTGCAGCAGGTGTTTCTAGACTCAGAAGCTGGAAACCGCTCT---------------------------------------------------GGCCCTGC--ACTCCCA--CCGC-CC-----CGCTCCAAGCCATCTAAAGTGAGGGGTAGAGGTGGACACAGATGGAATAAGGCT-GA-GTGCCATGCCTGG--TA------CCACCGCGCTCT s panTro5.chr3 2499975 160 - 202621043 -AGTGTCCTCTCTCACTGCAGCAGGTGTTTCTAGACTCAGAAGCTGGAAACCGCTCT---------------------------------------------------GGCCCTGC--ACTCCCA--CCAC-CC-----TGCTCCAAGCCATATAAAGTGAGGGGTAGAGGTGGACACAGATGGAATAAGGTT-GA-GTGCCATGCCTGG--TA------CCACCACGCTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94721 160 - 190779 -AGTGTCCTCTCTCACTGCAGCAGGTGTTTCTAGACTCAGAAGCTGGAAACCGCTCT---------------------------------------------------GGCCCTGC--ACTCCCA--CCAC-CC-----TGCTCCAAGCCATATAAAGTGAGGGGTAGAGGTGGACACAGATGGAATAAGGTT-GA-GTGCCATGCCTGG--TA------CCACCACGCTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 16417 160 + 55620 -AGTGTCCTCTCTCACTGCAGCAGGTGTTTCTAGACTCAGAAGCTGGAAACCGCTCT---------------------------------------------------GGCCCTGC--ACTCCCA--CCGC-CC-----CGCTCCAAGCCATATAAAGTGAGGGGTAGAGATGGACACAGATGGAATAAGGCT-GA-GTGCCATGCCTGG--TA------CCACCGCGCTCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2804110 150 - 123690457 -AGTGTCCTCTCTCACTGCAGCAGG----------CTCAGAAGCTGGAAACCGCTCT---------------------------------------------------GGCCCTGC--ACTCCCA--CCGC-CC-----CACCCCAAGCCATATAAAGTGAGGGGTAGAGGCGGACACAGGTGGAATAAGGCT-GA-GTGCCACGCCTGG--TA------CCATCGTGCTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318175 160 - 204787373 -AGCGTCCTCTCTCACTGCAGCAGGCGTTTCCAGACTCAGAAGCTAGAAACCGCTGT---------------------------------------------------CGCCCTGC--ACTCCCA--CCGC-CC-----TGCTCCAGGCCACATAAAGTGAGGGGTAGGGGTGGACACAGAAGGAATAAGGCT-GA-GTGCCATGCCCGG--TA------CCATCACGCTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192383928 160 - 192460366 -AGCGTCCTCTCTCACTGCAGCAGGCGTTTCCAGACTCAGAAGCTAGAAACCGCTGT---------------------------------------------------CGCCCTGC--ACTCCCA--CCGC-CC-----TGCTCCAGGCCACATAAAGTGAGGGGTAGGGGTGGACACAGAAGGAATAAGGCT-GA-GTGCCATGCCCGG--TA------CCATCACGCTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123013 160 - 19675229 -AGCATCCTCTCTCACCGCAGCAGGCGTTTCCAGACTCAGAAGCTAGAAACCGCTGT---------------------------------------------------CGCCCTGC--ACTCCCA--CCGC-CC-----CGCTCCAGGCCACATAAAGTGAGGGGTAGGGGTGGACACAGAAGGAATAAGGCT-GA-GTGCCATGCCCGG--TA------CCATCACACTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16356516 211 - 16847902 -AGCGTCCTCTCTCACTGCAGCAGGCGTTTCCAGACTCAGAAGCTAGAAACCGCTGTCGCCCTGCACTCCCACCGCCCCGCTCCAACCCAGAAGCTAGAAACCGCTGTCGCCCTGC--ACTCCCA--CCGC-CC-----CGCTCCAGGCCACATAAAGTGAGGGGTAGGGGTGGACACAGAAGGAATAAGGCT-GA-GTGCCATGCCGGG--TA------CCATCACGCTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329224 159 + 91754291 -AGTGTCCTCTGTCACTGCAGCAGGCGTTTCCAGACTCAGAAGCTAGAAACCGCTGT---------------------------------------------------GGCCCTGC--ACTCCCA---CGG-CC-----TGCTCCAAGCCACATAAAGTGAGGGGTAGGGGTGGACACAGAAGGAATAAGGCT-GA-GTGCCATGCCCGG--TA------CCATCACGCTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1383914 160 + 1977891 -AGTGTCCTCTCTCACCACAGCAGGCGTTTCCAGACTCAGAAGCTAGAAACCGCTGT---------------------------------------------------CGCCCTGC--ACTCCCA--CCGC-CC-----CGCTCCAGGCCACATAAAGTGAGGGGTAGGGGTGGACACAGAAGGAATAAGGCT-GA-GTGCCATGCCCGG--TA------CCATCACGCTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7335422 160 - 7796314 -AGTGTCCTCTCTCACTGCAGCAGGCGTTTCCAGACTCAGAAGCTAGAAACCGCTGT---------------------------------------------------CGCCCTGC--ACTCCCA--CCAC-CC-----CGCTCCAAGCCACATAAAGTGAGGGGTAGGGGTGGACACAGAAGGAATAAGGCT-GA-GTGCCATGCGTGG--TT------CCATCACGCTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73808175 148 + 74750902 -AGGGTCCTCT--CATTGCAGCATGCGTTTCCAGACTC--AAGCTGGAAACTGCTCT---------------------------------------------------GGCTCTGC--ACTCCCA--C------------------AGCCCCCCAAAGTGAGGGGTAGGGGTGGACACAGACAACATGAGGCT-GA-GTG-CACACCTGA--TA-CACGACCATAGAGCCCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17258178 158 - 17725628 -AGGGGCCTCTCCCGTTGCAGCAGGCGTTTCCAGACTC--AAGCTGGAAGCCGCTCT---------------------------------------------------GGGCCTGC--ACTCCCA--CAGC-C----------GCAAGCCACGTAAAGCGAGGGGTAGGGGTGGACACGGACAAAATGAGGCT-GA-GTGCCACACCTGA--TA-CCCGACCGTCGAGCCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6346532 155 + 6778120 -AGGG-CCTCTCTCATTGCAGCAGGCGCTTCCAGACTC--ATGCTGGAAACCGTTCT---------------------------------------------------GGCCCTGC--ACTCCCG--CCGC-C----------CCAAGCCACGTAAAGTGAGGGGCA-GGGTGGACACAGACAGAGTGAGGCT-GA-GTGCCACACCTGA--CA-CACGGCCGT-GAGCCCT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 187277 108 + 608964 --------------------------------------------------------------------------------------------------------GGGCTTCCCTAC--ATACCCC--ATCC-CC-----TGTCCTGAGCCATATAACCTGAGAGTTAGGGGCAGACACAGCAGAAACACAGCT-GA-GTCCCAC-CCTGAACCA------CCATCACCCTT- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32770036 157 + 98207768 -GTGGTCTTCACTCACTGAAGCAGGGATTTCCAGACTC-------TGAAATTATCCT---------------------------------------------------GTTCCTACCAGCTCCCAGGCCAC-CCCCTTACGCACAAAACCATATACA--GAGAGCTAGGGGTGGGCACAAGTGAAATATGACT-GGTGTCTTATAC------CA------CCCTCGTACCTC i mm10.chr16 C 0 I 1 s canFam3.chr33 2303144 151 - 31377067 --TGGCTCTCACTGACCAGAGTAGGCATTTCCGGCCTCAGAAGCCAGAAGTCACTCC---------------------------------------------------AGCCCTCC--GCATCTG--CCTCGCT-----CACCCCCAGGCACATAAAGTGAGGGGAGGGAGTAGA---------------GCT-GG-AGACCATCCCTGG--TGCCACCGCCATTGCATCCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2680544 155 - 6579706 ATGGACCTTTACCCACTGGAACTGGGATCACTGGGC-CAGAAGCCAGAAGCCATTCT---------------------------------------------------GTCCCTCC--ACACTCT--CTTCACT-----CTCCCCAAGCCATATAAAGTGA-AGATAAGGGTGGGCATGGCAGAAACATAACTGGA-GTCCCAC--------CA------CCATCACACCTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14777144 164 - 22200726 I e micMur3.chr1 88366882 164 + 114275543 I a score=14742.000000 s hg38.chr3_KI270934v1_alt 33607 1 + 163458 G s panTro5.chr3 2500135 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94881 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 16577 1 + 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2804260 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318335 1 - 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192384088 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123173 1 - 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16356727 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329383 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1384074 1 + 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7335582 1 - 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73808323 1 + 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17258336 1 - 17725628 G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6346687 1 + 6778120 G i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14777308 1 - 22200726 G i proCoq1.NW_012133858v1 I 164 C 0 s otoGar3.GL873829 187385 1 + 608964 G i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2303295 1 - 31377067 G i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2680699 1 - 6579706 A i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32770193 1 + 98207768 I e micMur3.chr1 88366882 164 + 114275543 I a score=1330750.000000 s hg38.chr3_KI270934v1_alt 33608 82 + 163458 TG-------TGTTACAGGGCAGATCAACGGGACAGGCCTCCTTGGCAAGAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCT s panTro5.chr3 2500136 82 - 202621043 TG-------TGTTACAGGGCAGATCAATGGGACAGGCCTCCTTGGCAAGAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94882 82 - 190779 TG-------TGTTACAGGGCAGATCAATGGGACAGGCCTCCTTGGCAAGAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 16578 82 + 55620 TG-------TGTTACAGGGCAGATCAACGGGACAGGCCTCCTTGGCAAGAGGAAAGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2804261 82 - 123690457 TG-------TGTTACAGGGCAGATCAACGGCACAGGCCTCCTTGGCAATAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318336 82 - 204787373 TG-------TGTTACAGGGCAGATCAACGGGACAGGCCTCCTTGGCAAGAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192384089 82 - 192460366 TG-------TGTTACAGGGCAGATCAACGGGACAGGCCTTCTTGGCAAGAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123174 82 - 19675229 TG-------TGTTACAGGGCAGATCAACGGGACAGGCCTCCTTGGCAAGAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16356728 82 - 16847902 TG-------TGTTACAGGGCAGATCAACGGGACAGGCCTCCTTGGCAAGAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329384 82 + 91754291 TG-------TGTTACAGGGCAGATCAACGGGACAGGCCTCCTTGGCAAGAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1384075 82 + 1977891 TG-------TGTTACAGGGCAGATCAACGGGACAGGCCTCCTTGGCAAGAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7335583 82 - 7796314 TG-------TGTTATAGGGCAGATCAACGGGACAGGCCTCCTTGGCAAGAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73808324 82 + 74750902 TG-------TGTTACAGGGGAGATCAACGGGACAGGCCTCCTTGGCAAGAGGAATGACCAGCTGCCCTCCAACTTCACCCCTGTTTTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17258337 82 - 17725628 TG-------TGTTACAGGGAAGATCAACGGGACAGGCCTCCTGGGCAAGAGGAATGACCAGCTGCCCTCCAACTTCACCCCTGCTTTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6346688 89 + 6778120 CGTGTTCCATGTTACAGGGGAGATCAACAGGACAGGCCTCCTCGGGGACAGGAACGACCCGCTGCCCCCCGGCTTCAGCCCTGTTTTCT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88367046 82 + 114275543 TG-------TGTTACAGGGAAAATCAATGAAACAAGCCTCCTTGGCGAGAGGAAAGACCATCTGCCCTCCAACTTCACCCCTGTCTTCT i micMur3.chr1 I 164 I 148 s proCoq1.NW_012133858v1 14777309 82 - 22200726 TG-------CGTTACAGGGAAAATCAACGAAACAAGCCTCCTTGGCAAGAAGAACGATCATCTGCCCTCCAGCTTCACCCCTGTCTTCT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 187386 82 + 608964 CA-------TGTTACAGGGAAAATCAATGGAACAAGCCTCTTTGGCAAGAAGAGTGACCACCTGGCTTCCAACTTCACCCCTGTCTTCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32770194 82 + 98207768 TG-------TGTTACAGGGCACGTCAACGGAACAGGCCTCCTTGGGATAAGGGCAGACCCGCTGCCTACCAAGTTCACCCCCATCTTTC i mm10.chr16 I 1 C 0 s canFam3.chr33 2303296 82 - 31377067 TG-------TCTTACAGGGAAAACCAATGATACGGGACTCCTTGGCGAGAGAGGTGACCATCCGCCTTCCAACTTCACCCCCGATTTCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2680700 82 - 6579706 TT-------TGTTATAGGGAAAATCAACGGAACAAGCTTCCTTGGCAAGAGGAACGACCATCTGCCTTCCAACTTCACCCCCATCTTCC i dasNov3.JH569502 C 0 C 0 a score=1494320.000000 s hg38.chr3_KI270934v1_alt 33690 148 + 163458 ACTCACAA-CTGCAAAAAAACAGCTCCTGGGCTGAACATTTGATCTCCAA-CTGTGACGGAGATAGCTCATGCATCTATGACACCCTGGCCCTGCGCAACGCAAGCATCGGACTTCACACGAGGGAAGTCAGTAAAAACTACGAGCAGGC s panTro5.chr3 2500218 148 - 202621043 ACTCACAA-CTGCAAAAAAACAGCTCCTGGGCTGAACATTTGATCTCCAA-CTGTGACGGAGACAGCTCATGCATCTATGACACCCTGGCCCTGCGCAACGCAAGCATCGGACTTCACACGAGGGAAGTCAGTAAAAACTACGAGCAGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94964 148 - 190779 ACTCACAA-CTGCAAAAAAACAGCTCCTGGGCTGAACATTTGATCTCCAA-CTGTGACGGAGACAGCTCATGCATCTATGACACCCTGGCCCTGCGCAACGCAAGCATCGGACTTCACACGAGGGAAGTCAGTAAAAACTACGAGCAGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 16660 148 + 55620 ACTCACAA-CTGCAAAAAAACAGCTCCTGGGCTGAACATTTGATCTCCAA-CTGTGACGGAGACAGCTCATGCATCTATGACACCCTGGCCCTGAGCAACGCAAGCATCGGACTTCACACGAGGGAAGTCAGTAAAAACTACGAGCAGGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2804343 142 - 123690457 ACTCACAA-CTGCAAAAAAACAGCTCCTGGGCTGAAGCTTTGAT-------CTGTGACGGAGACAGCTCATGCATCTATGACACTCTGGCCCTGCGCAACGCAAGCATCGGACTTCACACGAGGGCAGTCAGTAAAACCTACGAGCAGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318418 145 - 204787373 ACTCACAA-CTGC---AAAACAGCTCCTGGGCTGAAGATGTGATCTCCAG-CTGTAATGGAGACAGCTCATGCATCTATGACACCCTGGCCCTGCGCAACGCAAGCATCGGACTTCACACGAGGGCCGTCAGCAAAACCTACAAGCAGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192384171 145 - 192460366 ACTCACAA-CTGC---AAAACAGCTCCTGGGCTGAAGATGTGATCTCCAG-CTGTAATGGAGACAGCTCATGCATCTATGACACCCTGGCCCTGCGCAACGCAAGCATCGGACTTCACACGAGGGCCATCAGCAAAACCTACAAGCAGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123256 145 - 19675229 ACTCACAA-CTGC---AAAACAGCTCCTGGGCTGAAGATGTGATCTTCAG-CTGTAATGGAGACAGCTCATGCATCTATGACACCCTGGCCCTGCGCAACGCAAGCATCGGACTTCACACGAGGGCCGTCAGCAAAACCTACAAGCAGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16356810 145 - 16847902 ACTCACAA-CTGC---AAAACAGCTCCTGGGCTGAAGATGTGATCTCCAG-CTGTAATGGAGACAGCTCATGCATCTATGACACCCTGGCCCTGCGCAACGCAAGCATCGGACTTCACACGCGGGCCGTCAGCAAAACCTACAAGCAGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329466 148 + 91754291 ACTCACAA-CTGCAAAAAAACAGCTCATGGGCTGAAGATTTGATCTCCAG-CTGTAATGGAGACAGCTCATGCATCTATGACACCCTGGCCCTGCGCAACGCAAGCATCGGACTTCACACGAGGGCCGTCAGCAAAACCTACAAGCAGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1384157 145 + 1977891 ACTCACAA-CTGC---AAAACAGCTCCTGGGCTGAAGATGTGATCTCCAG-CTGTAATGGAGACAGCTCATGCATCTATGACACCCTGGCCCTGCGCAACGCAAGCATCGGACTTCATACGAGGGCCGTCAGCAAAACCTACAAGCAGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7335665 148 - 7796314 ACTCACAA-CTGCAAAAAAACAGCTCCTGGGATGAAGATTTGATCTCCAA-CTGTCATGGAGACAGCTCATGCATCTATGACACCCTGGCCCTGCGCAACGCAAGCATCGGATTTCACACGAGGGCCATCAGCAAAACCTACAAGCAGGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73808406 148 + 74750902 ATGACCAA-CTGCGAACAAACAGCTCCTCGGATCAAGATTTGATCTCCAGCCTGCAACGGAGATAGATCCTGCATCTATGACGCCCTGGCCACGCGCAACACAAGCATTGGACATCACACGCTGGCGCTCCATAA-AACTACGAGCGGGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17258419 148 - 17725628 ACGACCAG-CTGCAAACAAACAGCTCCTGGGATGAAGACTTGATCTCCAG-CTGCAGCGGAGACAGATCCTGCATCTACGACGCCCTTGCCACGCGCAACGCAAGCATCGGACTTCACACGCTGGCGCTCCGTAACACCTACGAGCGGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6346777 148 + 6778120 ACGACCAG-CTGCAAACCAACAGCTCCCTGGATGAAGATTTGATCTCCAG-CTGCAACGGAGACAGAGCCTGCATCTACGACGCCCTCGCCACGCGCAGCGCAGGCGTTGGACTTCACACCCTGGCGCTCCGTAAAACCTACGAGCGGGT i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14777391 148 - 22200726 TTTCCCAA-CTGTCGGGAAACAAATCCTTGGATGAAAATTTGGTCTCCAG-CTGTAACGGACAGAGACAGTGCATCTATGACGCCCTGCTCACGCGCGACACAAGCACTGGACTTCACACGATGATGCTCTTTAGAAGATACCAAGAGAT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 187468 148 + 608964 TTTCCCAA-CTGGTGGCGAACAACTCCTCAGATAAAAATTTGGTGACCAG-CTGTAATGGAGATAGGCAATGCATCTATGACACCCTGGTCACGGGTAATAAAAGCACTGGACTTCATACAATGATGCTATTTAGAAGATACCAAGAGAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32770276 148 + 98207768 TGTCTCAA-CTGTTGAATCAGAGTGCCTCAGGTGAAGACTTGGCCTCTGG-GTGCAAAGGCGACAGAAAGTGCATGTTTGACATCCTGGCCACGGGAAACAGAACTATTGGACAAAGCACCAATTCCATCCTTAATGAGTTCCAACATAT i mm10.chr16 C 0 C 0 s canFam3.chr33 2303378 148 - 31377067 -TTACCAGCCTGCAGAAAAATAAAACCTTAAATGAAATGCTGCTCTCCAA-GTGTCATGAAGATGAGCGGTGCATCTATGACAGCCTGGCCACAGGAAACACAGACACGGGCCTGAACACCAGGATGCTCTTCGCAAGTCAGCAGCGGAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2680782 148 - 6579706 TCTCTCAA-CTGTTAACCAACAACTCCTTAGAAGATAATTTGATCTCTGA-GTGTAACAATAATACACATTGCACCTACGACACCTTGGTCACAAGAAACAGAAGCATTGGATTGCACACTTCAGCATTCTTTAGAAGATACCAGTTGAT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88367128 148 + 114275543 I a score=165137.000000 s hg38.chr3_KI270934v1_alt 33838 9 + 163458 GAACGCCAC s panTro5.chr3 2500366 9 - 202621043 GAACGCCAC i panTro5.chr3 C 0 I 369 s panPan2.chrUn_NW_014024201v1 95112 9 - 190779 GAACGCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 16808 9 + 55620 GAACGCCAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2804485 9 - 123690457 GAATGCCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318563 9 - 204787373 GAACGCCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192384316 9 - 192460366 GAATGCCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123401 9 - 19675229 GAACGCCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16356955 9 - 16847902 GAACGCCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329614 9 + 91754291 GAACGCCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1384302 9 + 1977891 GAACGCCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7335813 9 - 7796314 GAACGCCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73808554 9 + 74750902 GAACGCCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17258567 9 - 17725628 GAACGCCAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6346925 9 + 6778120 GAACGCCAC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88367276 9 + 114275543 GAACACCAC i micMur3.chr1 I 148 C 0 s proCoq1.NW_012133858v1 14777539 9 - 22200726 GAACGCCAC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 187616 9 + 608964 GAACGGCAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32770424 9 + 98207768 GAATGACAC i mm10.chr16 C 0 C 0 s canFam3.chr33 2303526 9 - 31377067 GAACGCCAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2680930 9 - 6579706 GAACGCCAC i dasNov3.JH569502 C 0 C 0 a score=788499.000000 s hg38.chr3_KI270934v1_alt 33847 73 + 163458 CCTCAGTAAGTGGCCCGAG----GC---CTGGGGAGGCCTTTTCAGAG-TCGGGAGCAGATGAGGAGCTGCCCTTG--CCTGA s panPan2.chrUn_NW_014024201v1 95121 73 - 190779 CCTCAGTAAGTGGCCCGAG----GC---CCGGGAAGGCCTTTTCAGAG-TCGGGAGCAGATGAGGAGTTGCCCTTG--CCTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 16817 73 + 55620 CCTCAGTAAGTGGCCCGAG----GC---CCGGGGAGGCCTTTTCAGAG-TCGGGAGCAGATGAGGAGCTGCCCTTG--CCTGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2804494 73 - 123690457 CATCAGTAAGTGGCCCGAG----GC---CCCGGGAGGGCTTTTCAGAC-TTGGGAGCAGATGAGGAGCTGCCCTTG--CCTGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318572 72 - 204787373 CCTCAGTAAGTGGCCCGAG----CC---CCTGGGAGGCCTTTTCAGAG--CAGAAGCAGATGAGGAGCTGCCCTTC--CCTGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192384325 72 - 192460366 CCTCAGTAAGTGGCCCAAG----CC---CCTGGGAGGCCTTTTCAGAG--AAGAAGCAGATGAGGAGCTGCCCTTC--CCTGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123410 72 - 19675229 CCTCAGTAAGTGGCCTGAG----CC---CCTGGGAGGCCTTTTCAGAG--CAGAAGCAGATGAGGAGCTGCCCTTC--CCTGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16356964 72 - 16847902 CCTCAGTAAGTGGCCCGAG----CC---CCTGGGAGGCCTTTTCAGAG--CAGAAGCAGATGAGGAGCTGCCCTTC--CCTGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329623 72 + 91754291 CCTCAGTAAGTGGCCTGAG----CC---CCCGGGAGGCCTTTTCAGAG--CAGAAGCAGATGAGGAGCTGCCCTTC--CCTGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1384311 72 + 1977891 CCTCAGTAAGTGGCCCGAG----CC---CCTGGGAGGCCTTTTCAGAG--CAGAAGCAGATGAGGAGCTGCCCTTC--CCTGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7335822 73 - 7796314 CCTCAGTAAGTGGCCCGAG----GC---CCCGGGAGGCCTTTTCAGAG-TCAGAAGCAGATGAGGAGCTGCCCTTC--CCTGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73808563 71 + 74750902 CTTCAGTAAGTGGCCCAAC----GC---CCCAGGAGGCCTTTTCAGAG-CTGGGAGCTG-TGAGGAGCAG-CCTTC--CGTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17258576 72 - 17725628 CCTCAGTAAGTGGCCCGAG----GC---CCCAGGAGGCCTCTTCAGAG-CCGGGAGCCGATGAGGAGCAG-CCTTC--CCTGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6346934 72 + 6778120 CGTCAGTAAGTGGCCCGAG----GC---CCCAGGAGGCCTTTTCAGAG-CCGGGGGCTGAGGAGGAGCAG-CCCTC--CCTGA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88367285 74 + 114275543 CCTCAGTAAGCGGCGTGTG----GC---CCAGGGAGGCATTTTCAGAGCTGGGGAACAGATGAGGAGCTGCCCTTC--CCTGA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14777548 74 - 22200726 CCTCAGTAAGCGGCGCGTG----GC---CCAGGGAGGCATTTTCAGAGCTGGGGAACAGATGAAGAGCTGCCCTTC--CCTGA i proCoq1.NW_012133858v1 C 0 I 868 s otoGar3.GL873829 187625 74 + 608964 CCTCCGTAAGTGGCGTGTG----GC---CCAGGGAGGCATTTTCAGAGCTGGGGGGCAGATAAGGAGCCGCCCTTC--CCTGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32770433 62 + 98207768 CCTCAGTAAGTGACACGAG----GAAGGTCGGGGAGACCTTTCCAGAGATGGGGAGCAGGCAAGGA----------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2303535 80 - 31377067 CCTCAGTAAGTGGCGTGCGTCGCGC---GCGGGGAGACGTTTGCAGAGTTAGGTGGCAGATTAGGAGCCCCCCTCCCGCCCCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2680939 73 - 6579706 TCTCAGTAAGTGTCATATG----GC---CCAAGGACGCATTTCCAGAT-TAGGGAGCAGGTGAGGAGTCCATCTTC--CACAA i dasNov3.JH569502 C 0 C 0 e panTro5.chr3 2500375 369 - 202621043 I a score=15300.000000 s hg38.chr3_KI270934v1_alt 33920 1 + 163458 C s panPan2.chrUn_NW_014024201v1 95194 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 16890 1 + 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2804567 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318644 1 - 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192384397 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123482 1 - 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16357036 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329695 1 + 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1384383 1 + 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7335895 1 - 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73808634 1 + 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17258648 1 - 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6347006 1 + 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88367359 1 + 114275543 C i micMur3.chr1 C 0 I 766 s otoGar3.GL873829 187699 1 + 608964 C i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2303615 1 - 31377067 C i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2681012 1 - 6579706 C i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e mm10.chr16 32770495 0 + 98207768 C e panTro5.chr3 2500375 369 - 202621043 I a score=295927.000000 s hg38.chr3_KI270934v1_alt 33921 44 + 163458 CCTGCTTTTCCCTGTGCA-----TCTGCATTCACTGAGCAGATTCTTCC s panPan2.chrUn_NW_014024201v1 95195 44 - 190779 CCTGCTTTTCCCTGTGCA-----CCTGCATTCACGGAGCAGATTCTTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 16891 44 + 55620 CCTGCTTTTCCCTGTTTA-----TCTGCATTCACAGAGCAGATTCTTCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2804568 44 - 123690457 TCTGCTTTACCCTGTATA-----TCTGCATTCACTGAGCAGATTCTTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318645 44 - 204787373 CCTGCTTTACCCTGTGCA-----TCTGCATTCACTGAACAGATTCTTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192384398 44 - 192460366 CCTGCTTTACCCTGTGCA-----TCTGCATTCACTGAACAGATTCTTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123483 44 - 19675229 CCTGCTTTACCCTGTGCA-----TCTGCATTCACTGAACAGATTCTTTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16357037 44 - 16847902 CCTGCTTTACCCTGTGCA-----TCTGCATTCACTGAACAGATTCTTTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329696 44 + 91754291 CCTGCTTTACCCTGTGCA-----TCTGCATTCACTGAAGAGATTCTTTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1384384 44 + 1977891 CCTGCTTTACCCTGTGCA-----TCTGCATTCACTGAACAGATTCTTTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7335896 44 - 7796314 CCTGCTTTACCCTGTGCA-----TCTGCATTCACTGAGCAGATTCTTTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73808635 40 + 74750902 CCTGCTGGACCCTGCGCA-----ACTGCATTCAcggagcagattc---- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17258649 40 - 17725628 CCTGCATGACCCTGCGCA-----TCTGCATTCACCAAGCAGATTC---- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6347007 44 + 6778120 CCTGCTTGGCCCTGCGCC-----TCTGCCTTCACCGAGCAGATTCTTCC i cebCap1.NW_016107444v1 C 0 I 581 s otoGar3.GL873829 187700 44 + 608964 ACTCCCTTAAGCTCTGCA-----TTTTTATTCACTTAACAGATTCTGTT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32770495 5 + 98207768 --------CCCCC------------------------------------ i mm10.chr16 C 0 C 0 s canFam3.chr33 2303616 41 - 31377067 ---CCTTTTCACGATATT-----CCTTTAAAAATTTAACAGATTCTTTT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2681013 49 - 6579706 ATTCCTATAAGCTATCCATTTTTTTTTCATTCACTTAATGGATTCTTTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e micMur3.chr1 88367360 766 + 114275543 I e panTro5.chr3 2500375 369 - 202621043 I a score=472085.000000 s hg38.chr3_KI270934v1_alt 33965 98 + 163458 ACTCCTGGCATTCCTCTGCT-CAAA-CCCTTCAGAGACTTCCCTGGCTCTCTCCATCCTTGCAGTGGCCTT--CGGCCCAGTTCA-------------GCTT------------CTCAGAGCTCTTC s panPan2.chrUn_NW_014024201v1 95239 98 - 190779 ACTCCTGGCATTCCTCTGCT-CAAA-CCCTTCAGAGACTTCCCTGGCTCTCTCCATCCTTGCAGTGGCCTT--TGGCCCAGTTCA-------------GCTT------------CTCAGAGCTCTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 16935 98 + 55620 ACtcttgtcattcctctgct-caaa-cccttcagggacttccctggctctctccatccttgcagtggcctt--cggcccagttca-------------gctt------------ctcagagctcttc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2804612 97 - 123690457 ACTCCTGTTATTCCTCTGCT-CAGA-CCCTTCAGTGACTTCCCTGGCTGTCT-CATCCTTGCAGTGGCCTT--TGGCCTGGTTCA-------------GCTT------------CTCAGAGTTCTTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318689 97 - 204787373 GCTCCTGTTATTCCTCTGCT-CAGA-CCCTCCAGTGGCTTCCCCCGCTCTCTCCATCCTAGCAGTGGCCTT--TGGCCCAGTTCG-------------GCTT------------CTCAGAGCTCTT- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192384442 98 - 192460366 GCtcctgttattcctctgct-caga-ccctccagtggcttcccCCGCTCTCTCCATCCTAGCAGGGGCCTT--TGGCCCGGTTCA-------------GCTT------------CTCAGAGCTCTTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123527 97 - 19675229 GCTCCTGTTATTCCTCTGCT-CAGA-CCCTCCAGTGGCTTCCCCCGCTCTCTCCATCCTAGCAGTGGCCTT--TGGCCTAGTTCG-------------GCTT------------CTCAGAGCTCTT- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16357081 98 - 16847902 GCTCCTGTTATTCCTCTGCT-CAGA-CCCTCCAGTGGCTTCCCCCGCTCTCTCCATCCTAGCAGTGGCCTT--TGGCCCGGTTCG-------------GCTT------------CTCAGAGCTCTTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329740 98 + 91754291 GCTCCTGTTATTCCTCTGCT-CAGA-CCCTCCAGTGGCTTCCCCCGCTCTCTCCATCCTAGCAGTGGCCTT--TGGCCTGGTTCA-------------GCTT------------CTCAGAGCTCTTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1384428 98 + 1977891 GCTCCTGTTATTCCTCTGCT-CAGA-CCCTCCAGTGGCTTCCCCCGCTCTCTCCATCCTAGCAGTGGCCTT--TGGCCCGGTTCG-------------GGTT------------CTCAGAGCTCTTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7335940 98 - 7796314 GCTGCtgttattcctctgct-caga-ccctccagtggcttccctggctctctccatcctagcagtggcctt--tggcccagttcg-------------gctt------------ctcagagctcttc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73808675 98 + 74750902 ----------ttcctctgct-caaa-tcctccactgacttccc-ggctctctccatccttaccgtggcctt--aggcct-gttcagtctggtcccgccgctt------------cttagaggtctt- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17258689 99 - 17725628 ----------Ttcctctgct-caaa-tcctccagtgacttccc-ggctctctccatccttacggtggcctt--aggcct-gttcagtctggtcccgccgctt------------cccagagatcttc i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 187744 84 + 608964 GCtcacattactcttgcactccaaa-ccttcccgtgaaccccc-aactcactaggcgcttgcgatggtctcaatgacctgatttg-------------g---------------------------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32770500 52 + 98207768 ATTCATGGCATTCC----CT-CAAG-CTCCACG----------------TCTTTATTCCTTTAGT--------GGGTCAAAT--------------------------------------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2303657 25 - 31377067 -----------------GCT-CAGG-TTGTTC-----CTCCCATGACTC------------------------------------------------------------------------------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2681062 112 - 6579706 GCtcctgttagtcctctgct-caaagtccaccaatgacttccc-aatttactcagtccttacaatgaccttcaaggcactattca-------------ggcttgtccctgttgcctctgaattgttc i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e micMur3.chr1 88367360 766 + 114275543 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e panTro5.chr3 2500375 369 - 202621043 I a score=45036.000000 s hg38.chr3_KI270934v1_alt 34063 7 + 163458 TCCTAGT s panTro5.chr3 2500744 7 - 202621043 TCCTAGT i panTro5.chr3 I 369 C 0 s panPan2.chrUn_NW_014024201v1 95337 7 - 190779 TCCTAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 17033 7 + 55620 tcctagt i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2804709 7 - 123690457 TCCTAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318786 5 - 204787373 --CTAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192384540 7 - 192460366 TCCTAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123624 5 - 19675229 --CTAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16357179 7 - 16847902 TCCTAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329838 7 + 91754291 TCCTAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1384526 7 + 1977891 TCCTAGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7336038 7 - 7796314 acctagt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73808773 5 + 74750902 --ctcat i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17258788 7 - 17725628 tcctcct i saiBol1.JH378146 C 0 C 0 s dasNov3.JH569502 2681174 7 - 6579706 tcctact i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e mm10.chr16 32770552 0 + 98207768 C e micMur3.chr1 88367360 766 + 114275543 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e canFam3.chr33 2303682 0 - 31377067 C e otoGar3.GL873829 187828 0 + 608964 C a score=75458.000000 s hg38.chr3_KI270934v1_alt 34070 15 + 163458 GCTGGACGCCTTCCC s panTro5.chr3 2500751 15 - 202621043 GCTGGACGCCTTCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95344 15 - 190779 GCTGGACGCCTTCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 17040 15 + 55620 gctggaccccttccc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2804716 15 - 123690457 GCTGGACCCCTTCCC i nomLeu3.chr11 C 0 I 6469 s rheMac8.chr2 2318791 15 - 204787373 GCTGGACCCCTTCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192384547 15 - 192460366 GCTGGACCCCTTCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123629 15 - 19675229 GCTGGACCCCTTCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16357186 15 - 16847902 GCTGGACCCCTTCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329845 15 + 91754291 GCTGGACCCCTTCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1384533 15 + 1977891 GCTGGACCCCTTCCC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73808778 15 + 74750902 gctatacccgctccc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17258795 15 - 17725628 gctacaccccttccc i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 187828 3 + 608964 -----------tcc- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32770552 6 + 98207768 --------CCTCCC- i mm10.chr16 C 0 C 0 s canFam3.chr33 2303682 2 - 31377067 -------------CC i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2681181 7 - 6579706 -----acccccc--- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e micMur3.chr1 88367360 766 + 114275543 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e colAng1.NW_012118932v1 7336045 0 - 7796314 C a score=39974.000000 s hg38.chr3_KI270934v1_alt 34085 7 + 163458 AGCCCCC s panTro5.chr3 2500766 7 - 202621043 AGCCCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95359 6 - 190779 AG-CCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 17055 7 + 55620 agccccc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2811200 7 - 123690457 AGCCCCC i nomLeu3.chr11 I 6469 C 0 s rheMac8.chr2 2318806 7 - 204787373 AGCTCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192384562 2 - 192460366 AG----- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123644 7 - 19675229 AGCTCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16357201 7 - 16847902 AGCTCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329860 7 + 91754291 AGCTCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1384548 7 + 1977891 AGCTCCC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73808793 7 + 74750902 tgctccc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17258810 7 - 17725628 agctccc i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 187831 7 + 608964 agcccat i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32770558 7 + 98207768 AGCTCCC i mm10.chr16 C 0 I 35 s canFam3.chr33 2303685 7 - 31377067 GGCTCAC i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2681188 7 - 6579706 acttcac i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e micMur3.chr1 88367360 766 + 114275543 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e colAng1.NW_012118932v1 7336045 0 - 7796314 C a score=9555.000000 s hg38.chr3_KI270934v1_alt 34092 1 + 163458 T s panTro5.chr3 2500773 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95365 1 - 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 17062 1 + 55620 t i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2811207 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318813 1 - 204787373 T i rheMac8.chr2 C 0 I 1 s macNem1.NW_012014355v1 19123651 1 - 19675229 T i macNem1.NW_012014355v1 C 0 I 48 s cerAty1.NW_012004056v1 16357208 1 - 16847902 T i cerAty1.NW_012004056v1 C 0 I 48 s chlSab2.chr15 91329867 1 + 91754291 T i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1384555 1 + 1977891 T i manLeu1.NW_012102020v1 C 0 I 10166 s calJac3.chr17 73808800 1 + 74750902 t i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17258817 1 - 17725628 t i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 187838 1 + 608964 t i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2303692 1 - 31377067 T i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2681195 1 - 6579706 t i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e mm10.chr16 32770565 35 + 98207768 I e micMur3.chr1 88367360 766 + 114275543 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e colAng1.NW_012118932v1 7336045 0 - 7796314 C e macFas5.chr2 192384564 0 - 192460366 C a score=-4580.000000 s hg38.chr3_KI270934v1_alt 34093 2 + 163458 CC- s panTro5.chr3 2500774 2 - 202621043 CC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95366 2 - 190779 CC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 17063 2 + 55620 cc- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2811208 2 - 123690457 CC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318815 1 - 204787373 C-- i rheMac8.chr2 I 1 I 46 s chlSab2.chr15 91329868 1 + 91754291 C-- i chlSab2.chr15 C 0 I 1 s calJac3.chr17 73808801 2 + 74750902 cc- i calJac3.chr17 C 0 I 452 s saiBol1.JH378146 17258818 2 - 17725628 cc- i saiBol1.JH378146 C 0 I 453 s canFam3.chr33 2303693 1 - 31377067 -C- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2681196 2 - 6579706 -ca i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e mm10.chr16 32770565 35 + 98207768 I e micMur3.chr1 88367360 766 + 114275543 I e macNem1.NW_012014355v1 19123652 48 - 19675229 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e otoGar3.GL873829 187839 0 + 608964 C e colAng1.NW_012118932v1 7336045 0 - 7796314 C e manLeu1.NW_012102020v1 1384556 10166 + 1977891 I e cerAty1.NW_012004056v1 16357209 48 - 16847902 I e macFas5.chr2 192384564 0 - 192460366 C a score=-2935.000000 s hg38.chr3_KI270934v1_alt 34095 1 + 163458 -G s panTro5.chr3 2500776 1 - 202621043 -A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95368 1 - 190779 -A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 17065 1 + 55620 -a i gorGor5.CYUI01001831v1 C 0 I 74 s nomLeu3.chr11 2811210 1 - 123690457 -A i nomLeu3.chr11 C 0 I 1408 s chlSab2.chr15 91329870 1 + 91754291 -A i chlSab2.chr15 I 1 I 1 s otoGar3.GL873829 187839 1 + 608964 -g i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2303695 1 - 31377067 -G i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2681198 1 - 6579706 c- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e mm10.chr16 32770565 35 + 98207768 I e micMur3.chr1 88367360 766 + 114275543 I e macNem1.NW_012014355v1 19123652 48 - 19675229 I e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e colAng1.NW_012118932v1 7336045 0 - 7796314 C e manLeu1.NW_012102020v1 1384556 10166 + 1977891 I e cerAty1.NW_012004056v1 16357209 48 - 16847902 I e macFas5.chr2 192384564 0 - 192460366 C e rheMac8.chr2 2318816 46 - 204787373 I a score=2662.000000 s hg38.chr3_KI270934v1_alt 34096 49 + 163458 TCCATCCTAG---CGCTGGATGCCTT----------------CCCAGCCCCCTTCACTCCATACTAGC------ s panTro5.chr3 2500777 49 - 202621043 TCCATCCTAG---CGCTGGACGCCTT----------------CCCAGCTCCCTCCACTCCATCCTAGC------ i panTro5.chr3 C 0 I 112 s panPan2.chrUn_NW_014024201v1 95369 49 - 190779 TCCATCCTAG---TGCTGGACGCCTT----------------CCCAGCCCTCTCCACTCCATCCTAGT------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 17140 49 + 55620 TCCATCCTGG---CGCTGGACGCCTT----------------CCCAGCCCCCTCCACTCCATCCTGGC------ i gorGor5.CYUI01001831v1 I 74 C 0 s nomLeu3.chr11 2812619 49 - 123690457 TCCATCCTAG---TGCTGGACCCCTT----------------CCCAGCCCCCTCCACTCCATCCTAGT------ i nomLeu3.chr11 I 1408 C 0 s macFas5.chr2 192384564 14 - 192460366 -----------------------------------------------CTCCCTGCACTCCA------------- i macFas5.chr2 C 0 C 0 s otoGar3.GL873829 187840 11 + 608964 ---------------------------------------------------------cccattctggc------ i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2303696 5 - 31377067 -------------TGATG-------------------------------------------------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2681199 74 - 6579706 tccattcctgctccactgccttctttgtgttcttcaaacatgcggggccctctcatctctgagcttttgcacgt i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e mm10.chr16 32770565 35 + 98207768 I e micMur3.chr1 88367360 766 + 114275543 I e macNem1.NW_012014355v1 19123652 48 - 19675229 I e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e colAng1.NW_012118932v1 7336045 0 - 7796314 C e manLeu1.NW_012102020v1 1384556 10166 + 1977891 I e chlSab2.chr15 91329871 1 + 91754291 I e cerAty1.NW_012004056v1 16357209 48 - 16847902 I e rheMac8.chr2 2318816 46 - 204787373 I a score=23516.000000 s hg38.chr3_KI270934v1_alt 34145 33 + 163458 GCTGGACGCCTTCCCAG-------CCCCCTCCAC--------TCCATC s panTro5.chr3 2500938 33 - 202621043 GCTGGACGCCTTCCCAG-------CCCCCTCCAC--------TCCATC i panTro5.chr3 I 112 C 0 s panPan2.chrUn_NW_014024201v1 95418 33 - 190779 GCTGGACGCCTTCCCAG-------CCCCCTCCAC--------TCCATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 17189 33 + 55620 GCTGGACGCCTTCCCAG-------CCCCCTCCAC--------TCCATC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2812668 33 - 123690457 GCTGGACCCCTTCCCAG-------CTCCCTCCAC--------TCCATC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192384578 25 - 192460366 -------GCCCGCTCAG-------TCTGCCCCCC--------GCCAT- i macFas5.chr2 C 0 C 0 s otoGar3.GL873829 187851 10 + 608964 ------------------------------ccgc--------tccttc i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2303701 20 - 31377067 -------ACATTCACAG-------CCCTTTCCAA-------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2681273 48 - 6579706 gctgtcctctttgcctggaatgcccctcccccacaggctcactccctc i dasNov3.JH569502 C 0 I 460 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e mm10.chr16 32770565 35 + 98207768 I e micMur3.chr1 88367360 766 + 114275543 I e macNem1.NW_012014355v1 19123652 48 - 19675229 I e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e colAng1.NW_012118932v1 7336045 0 - 7796314 C e manLeu1.NW_012102020v1 1384556 10166 + 1977891 I e chlSab2.chr15 91329871 1 + 91754291 I e cerAty1.NW_012004056v1 16357209 48 - 16847902 I e rheMac8.chr2 2318816 46 - 204787373 I a score=2865.000000 s hg38.chr3_KI270934v1_alt 34178 2 + 163458 CT s panTro5.chr3 2500971 2 - 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95451 2 - 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 17222 2 + 55620 CT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2812701 2 - 123690457 CT i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 187861 2 + 608964 ct i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e mm10.chr16 32770565 35 + 98207768 I e micMur3.chr1 88367360 766 + 114275543 I e dasNov3.JH569502 2681321 460 - 6579706 I e macNem1.NW_012014355v1 19123652 48 - 19675229 I e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e canFam3.chr33 2303721 0 - 31377067 C e colAng1.NW_012118932v1 7336045 0 - 7796314 C e manLeu1.NW_012102020v1 1384556 10166 + 1977891 I e chlSab2.chr15 91329871 1 + 91754291 I e cerAty1.NW_012004056v1 16357209 48 - 16847902 I e macFas5.chr2 192384603 0 - 192460366 C e rheMac8.chr2 2318816 46 - 204787373 I a score=11737.000000 s hg38.chr3_KI270934v1_alt 34180 29 + 163458 AGCGCTGGACCCCTTCCCAGCCCCCTCCA s panTro5.chr3 2500973 29 - 202621043 AGTGCTGGACGCCTTCCCAGCCCCCTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95453 10 - 190779 AGTGCTGGAC------------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 17224 29 + 55620 GGCGCTGGACGCCTTCCCAGCCCCCTCCA i gorGor5.CYUI01001831v1 C 0 I 758 s nomLeu3.chr11 2812703 29 - 123690457 AGTGCTGGACCCCTTCCCAGCTCCCTGCA i nomLeu3.chr11 C 0 I 1 s macFas5.chr2 192384603 15 - 192460366 -------------TTCTCAGAGCTCTTC- i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e mm10.chr16 32770565 35 + 98207768 I e micMur3.chr1 88367360 766 + 114275543 I e dasNov3.JH569502 2681321 460 - 6579706 I e macNem1.NW_012014355v1 19123652 48 - 19675229 I e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e canFam3.chr33 2303721 0 - 31377067 C e otoGar3.GL873829 187863 0 + 608964 C e colAng1.NW_012118932v1 7336045 0 - 7796314 C e manLeu1.NW_012102020v1 1384556 10166 + 1977891 I e chlSab2.chr15 91329871 1 + 91754291 I e cerAty1.NW_012004056v1 16357209 48 - 16847902 I e rheMac8.chr2 2318816 46 - 204787373 I a score=3820.000000 s hg38.chr3_KI270934v1_alt 34209 4 + 163458 TCCA s panTro5.chr3 2501002 4 - 202621043 TCCA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 18011 4 + 55620 TCCA i gorGor5.CYUI01001831v1 I 758 C 0 s nomLeu3.chr11 2812733 4 - 123690457 TCCA i nomLeu3.chr11 I 1 C 0 s chlSab2.chr15 91329872 4 + 91754291 TCCA i chlSab2.chr15 I 1 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e mm10.chr16 32770565 35 + 98207768 I e micMur3.chr1 88367360 766 + 114275543 I e dasNov3.JH569502 2681321 460 - 6579706 I e macNem1.NW_012014355v1 19123652 48 - 19675229 I e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e canFam3.chr33 2303721 0 - 31377067 C e otoGar3.GL873829 187863 0 + 608964 C e colAng1.NW_012118932v1 7336045 0 - 7796314 C e manLeu1.NW_012102020v1 1384556 10166 + 1977891 I e cerAty1.NW_012004056v1 16357209 48 - 16847902 I e macFas5.chr2 192384618 0 - 192460366 C e rheMac8.chr2 2318816 46 - 204787373 I e panPan2.chrUn_NW_014024201v1 95463 0 - 190779 C a score=40380.000000 s hg38.chr3_KI270934v1_alt 34213 15 + 163458 TCCTAGCGCTGGATG s panTro5.chr3 2501006 15 - 202621043 TCCTAGCGCTGGACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95463 1 - 190779 --------------G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 18015 15 + 55620 TCCTGGCGCTGGACG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2812737 15 - 123690457 TCCTAGTGCTGGACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318862 15 - 204787373 TCCTAGTGctggacc i rheMac8.chr2 I 46 C 0 s macFas5.chr2 192384618 15 - 192460366 TCCTAGTGCTGgacc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123700 15 - 19675229 TCCTAGTGctggacc i macNem1.NW_012014355v1 I 48 C 0 s cerAty1.NW_012004056v1 16357257 15 - 16847902 TCCTAGTGctggacc i cerAty1.NW_012004056v1 I 48 C 0 s chlSab2.chr15 91329876 15 + 91754291 TCCTAGTGCTGGACC i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2303721 14 - 31377067 -CCTGAccccagaag i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e mm10.chr16 32770565 35 + 98207768 I e micMur3.chr1 88367360 766 + 114275543 I e dasNov3.JH569502 2681321 460 - 6579706 I e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e otoGar3.GL873829 187863 0 + 608964 C e colAng1.NW_012118932v1 7336045 0 - 7796314 C e manLeu1.NW_012102020v1 1384556 10166 + 1977891 I a score=97032.000000 s hg38.chr3_KI270934v1_alt 34228 23 + 163458 CCTTCCCAGCcccctccactcca s panTro5.chr3 2501021 23 - 202621043 CCTTCCCAGCCCCCTCCACTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95464 23 - 190779 CCTTCCCAGCCCCCTCCACTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 18030 23 + 55620 CCTTCCCAGCCCCCTCCACTCCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2812752 23 - 123690457 CCTTCCCAGCTCCCTGCACTCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318877 23 - 204787373 ccttcccagctccctgcactcca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192384633 23 - 192460366 ccttcccagctccctgcactcca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123715 23 - 19675229 ccttcccagctccctgcactcca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16357272 23 - 16847902 ccttcctacctccctccactcca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329891 23 + 91754291 CTTTCCCAGCTCCCTCCACTCCA i chlSab2.chr15 C 0 C 0 s mm10.chr16 32770600 23 + 98207768 CCTTCACTGCCCTATGCACTCTG i mm10.chr16 I 35 C 0 s canFam3.chr33 2303735 21 - 31377067 -ctctccaactctccctctcct- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e micMur3.chr1 88367360 766 + 114275543 I e dasNov3.JH569502 2681321 460 - 6579706 I e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e otoGar3.GL873829 187863 0 + 608964 C e colAng1.NW_012118932v1 7336045 0 - 7796314 C e manLeu1.NW_012102020v1 1384556 10166 + 1977891 I a score=21589.000000 s hg38.chr3_KI270934v1_alt 34251 7 + 163458 tcctagc s panTro5.chr3 2501044 7 - 202621043 TCCTAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95487 7 - 190779 tcctagc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 18053 7 + 55620 TCCTGGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2812775 7 - 123690457 TCCTGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318900 7 - 204787373 tcctact i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192384656 7 - 192460366 tcctact i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123738 7 - 19675229 tcctact i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16357295 7 - 16847902 tcctact i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329914 7 + 91754291 TCCTAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1394722 7 + 1977891 tcctagt i manLeu1.NW_012102020v1 I 10166 C 0 s mm10.chr16 32770623 5 + 98207768 --CCACT i mm10.chr16 C 0 I 2 s canFam3.chr33 2303756 2 - 31377067 tc----- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e micMur3.chr1 88367360 766 + 114275543 I e dasNov3.JH569502 2681321 460 - 6579706 I e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e otoGar3.GL873829 187863 0 + 608964 C e colAng1.NW_012118932v1 7336045 0 - 7796314 C a score=154832.000000 s hg38.chr3_KI270934v1_alt 34258 26 + 163458 gctggaccccttcccagctccctgca s panTro5.chr3 2501051 26 - 202621043 GCTGGACGCCTTCCCAGCCCCCTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95494 26 - 190779 gctggacgccttcccagctccctgca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 18060 26 + 55620 GCTGGACGCCTTCCCAGCCCCCTCCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2812782 26 - 123690457 GTTGGAccccttcccagctccctaca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318907 26 - 204787373 gctggaccccttcccacctccctcca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192384663 26 - 192460366 gctggacgccttcccacctccctcca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123745 26 - 19675229 gctggaccccttcccacctccctcca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16357302 26 - 16847902 gctggaccccttcccacctccctcca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329921 26 + 91754291 GCTGGaccccttcccagctccctcca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1394729 26 + 1977891 gctggaccccttcccacctccctcca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7336045 26 - 7796314 gctggaccccttcccagctccctcca i colAng1.NW_012118932v1 C 0 C 0 s mm10.chr16 32770630 18 + 98207768 ------CCCCTTCTCCTCCCCTCC-- i mm10.chr16 I 2 C 0 s canFam3.chr33 2303758 20 - 31377067 ------tccctgccctgctccctcca i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e micMur3.chr1 88367360 766 + 114275543 I e dasNov3.JH569502 2681321 460 - 6579706 I e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e otoGar3.GL873829 187863 0 + 608964 C a score=48776.000000 s hg38.chr3_KI270934v1_alt 34284 5 + 163458 ctcca s panTro5.chr3 2501077 5 - 202621043 CTCCA i panTro5.chr3 C 0 I 1 s panPan2.chrUn_NW_014024201v1 95520 5 - 190779 ctcca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 18086 5 + 55620 CTCCA i gorGor5.CYUI01001831v1 C 0 I 692 s nomLeu3.chr11 2812808 5 - 123690457 ctcca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318933 5 - 204787373 ctcca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192384689 5 - 192460366 ctcca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123771 5 - 19675229 ctcca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16357328 5 - 16847902 ctcca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329947 5 + 91754291 ctcta i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1394755 5 + 1977891 ctcca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7336071 5 - 7796314 ctcca i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 187863 5 + 608964 ctcca i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32770648 5 + 98207768 CTCCA i mm10.chr16 C 0 C 0 s canFam3.chr33 2303778 5 - 31377067 ctcca i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e micMur3.chr1 88367360 766 + 114275543 I e dasNov3.JH569502 2681321 460 - 6579706 I e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I a score=639630.000000 s hg38.chr3_KI270934v1_alt 34289 151 + 163458 gccccgcaggctcctctgtgttcttcaaacacgctagg----tgcgctcagctc-ccaggcttcacacgtgctgttctcttgcctggaatacc-cttccttccctggacagccacacgcttgc-ccctcaccttctttacgtcttcattccaat---gtcc s panPan2.chrUn_NW_014024201v1 95525 151 - 190779 gccccgcaggctcctctgtgttcttcaaacacgctagg----tgcgctcagctc-ccaggcttcacacatgctgttctcttgcctggaatacc-cttccttcgctggacagccacacgcttgc-ccctcacctcctttatgtcttcattccaat---gtcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2812813 151 - 123690457 gccctgtaggctcctctgtgttcttcagacacaccagg----tgtgctcagctc-ccaggcttcacacgtgctgttctcttgcctggaatacc-cttcattccctggacagccacacgcttgc-ccctcacctcctttatgtcttcattccaat---gtcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2318938 154 - 204787373 gccccgcaggctcctctgtgttcctcaaacacaccaggcatgtgcgctcagctc-ccaggcttcacacgtgctgttctcttgcct-gaatgccttttccttccctggacagccacacgcttgc-ccctcacctcctttatgtctttattccaat----tcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192384694 153 - 192460366 gccccgcaggctcctctgtgttcctcaaacacaccaggcatgtgcgctcagctc-ccaggcttcacacatgctgttctcttgcct-gaatgcc-tttccttccctggacagccacacgcttgc-ccctcacctcctttatgtctttattccagt----tcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123776 153 - 19675229 gccccgcaggctcctctgtgttcctcaaacacaccaggcatgtgcgctcagctc-ccaggcttcacacgtgctgttctcttgcct-gaatgcc-tttccttccctggacagccacacgcttgc-ccctcacctcctttatgtctttattccaat----tcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16357333 153 - 16847902 gccccgcagggtcctctgtgttccccaaacacaccaggcatgtgcgctcagctc-ccaggcttcacacgtgctgttctcttgcct-ggatgcc-tttccttccctggacagccacacgcttgc-ccctcacctcctttatgtctttattccaat----tcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91329952 155 + 91754291 gcccggcaggctcctctgtgttcctcaaacacaccaggcatgcgcgctcagctc-ccaggcttcacacgtgctgttctcttgcctagaatgcc-tttccttccctggacagcaacacgcttgc-ccctcacctcctttatgtctttattccaat---gtcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1394760 152 + 1977891 gccccgcaggctcctctgtgttcctcaaacacaccaggcatatgcgctcagctc-ccaggcttcaca-gtgctgttctcttgcct-gaatgcc-tttccttccctggacagccacacgcttgc-ccctcacctcctttatgtctttattccaat----tcc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7336076 154 - 7796314 gccccgcaggctcctctgtgttcctcaaacacaccaggcatgcgcgctcagctc-ccaggcctcacacatgctgttctctcacctagaatgc--ttcccttccctggacagccacacgcttgc-ccctcacctcctttatgcctttattccaat---gtcc i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 187868 150 + 608964 gccctatgggcttctgtgtgttttccaaacgccccggct---catcctcaactc-caagacttcacacatgctgctcccctccctggagcgcc----cgtcccccgggcagtcacatgcttgctccctcacctcctccttgcctttattccagt---gtgc i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32770653 103 + 98207768 -CTCCACTGGCTTCTTTGGGCT---------CACTGG--------------------AAACTCTGCATGTGCCTTTCTCTTAC----AAGGCT----CTCTCCACAGCCAGCCACAGGCAGGT-CACT-GCCTTCTTAAGCCC------------------ i mm10.chr16 C 0 C 0 s canFam3.chr33 2303783 149 - 31377067 gccctcctggcttctccgtgttcaccaaccacagcggg----ctcgctcctcactccaggctccatccatggccctctctgccct--gacacc-cttcctcc---aggcagccccaggctca--ccctctcctcctccaaggctgcgtgcaagcagagtcg i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e micMur3.chr1 88367360 766 + 114275543 I e dasNov3.JH569502 2681321 460 - 6579706 I e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e gorGor5.CYUI01001831v1 18091 692 + 55620 I e panTro5.chr3 2501082 1 - 202621043 I a score=2037106.000000 s hg38.chr3_KI270934v1_alt 34440 349 + 163458 cctccttggtgaggcct----ctc--------------ttggcc-------------------------------gccctgtctaaaa---------------------tgtcacattc----------------------acccacacttcatgtt------------------------------tgccttccctgctttatttttttctccttagcatttataattactcaa-------catattttataattttcacaggtatcttttt-aattatt---------------------------------------------------cattcatgactgtatcctcaccacccagaacagtgcc--agccactta------gctcaataaatgtttgttaaatgactgaCTGAATGAATGTGTGAAGCAactatgaaatggaaatggcagggctccgag--aaac--agacccgtgaagaggtttcactccctctctatttctggacaaatgcaatgtccctttagatgtgacccTC s panTro5.chr3 2501083 349 - 202621043 cctcctcagtgaggcct----ctc--------------ttggcc-------------------------------gccctgtctaaaa---------------------tgtcacattc----------------------acccacacttcgtgtt------------------------------tgccttccctgctttatttttttctccttagcatttataattactcaa-------catattttataattttcacaggtatcttttt-tattatt---------------------------------------------------cattcatgactgtatcctcaccacccagaacagtgcc--agccactta------gctcaataaatgtttgttaaatgactgaCTGAATGAATGCGTGAAGCAactatgaaatggaaatggcagggctccgag--aaac--agacccgtgaagaggtttcactccctctctatttctggacaaaagcaatgtccgtttagatgtgacccTC i panTro5.chr3 I 1 C 0 s panPan2.chrUn_NW_014024201v1 95676 348 - 190779 cctcctcagtgaggcct----ctc--------------ttggcc-------------------------------gccctgtctaaaa---------------------tgtcacattc----------------------acccacacttcgtgtt------------------------------tgccttccctgcttta-ttttttctccttagcatttataattactcaa-------catattttataattttcacaggtatcttttt-tattatt---------------------------------------------------cattcatgactgtatcctcaccacccagaacagtgcc--agccactta------gctcaataaatgtttgttaaatgactgaCTGAATGAATGCGTGAAGCAactatgaaatggaaatggcagggctccgag--aaac--agacccgtgaagaggtttcactccctctctatttctggacaaaagcaatgtccgtttagatgtgacccTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2812964 345 - 123690457 cctccttggcaatgcct----ttc--------------ttggcc-------------------------------accctgtccaaaa---------------------tgtcacattc----------------------acccacacttcctgtt------------------------------tgccttccctgcc----ttttttctccttagcatttataattactcaa-------catattttataattttcacaggtatcttttt-tattatt---------------------------------------------------cattcatgactgtatcctcatcacccagaacagtgcc--agccactta------gctcaataaatatttgttaaatgactgaCTGAATGAATGCGTGACGCAactatgaaatggaaatggcagggctccgag--aaac--agacccgtggagaggtttcactccctctctatttctggacaaatgcaatatccgtttagatgtgatcctc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2319092 349 - 204787373 cctcctcagcaagggct----ctc--------------ttggcc-------------------------------gccctgtctaaaa---------------------tggcacattc----------------------acccacacttcctgtt------------------------------tgccttccctgctttatttttttctccttagcatttataattactcaa-------catattttataattttcacaggtatcttttt-tattatt---------------------------------------------------cattcatgactgtatcctcactacccagagcaatgcc--agccactta------gctcaataaatatttgttaaatgaCAGATTGAATGGATGTGTGAACCAACTatgaaatggaaatggcagggctccgag--aaac--agccccgtgaaaaggtttcactccctctctatttctggacaaatgtgatgtgcgtttcgatgtgactctc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192384847 347 - 192460366 cctcctcagcgagggct----ctc--------------ttggcc-------------------------------gccctgtctaaaa---------------------tggcacattc----------------------acccacacttcctgtt------------------------------tgcctttccttctttatttttttctccttagcatttataattactcaa-------c--attttataattttcacaggtatcttttt-tattatt---------------------------------------------------cattcatgactgtatcctcactacccagagcaatgcc--agccactta------gctcaataaatatttgttaaatgaCAGATTGAATGGATGTGTGAACCAACTatgaaatggaaatggcagggctccgag--aaac--agccccgtgaaaaggtttcactccctctctatttctggacaaatgtgatgtgcgtttcgatgtgactctc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19123929 346 - 19675229 cctcctcagcaagggct----ctc--------------ttggcc-------------------------------gccctgtctaaaa---------------------tggcacattc----------------------acccacacttcctgtt------------------------------tgccttccctgctttatttttttctccttagcatttataattactcaa-------catattttataattttcacaggtatc---tt-tattatt---------------------------------------------------cattcatgactgtatcctcactacccagagcaatgcc--agccactta------gctcaataaatatttgttaaatgacagattgaATGGATGTGTGAACCAACTatgaaatggaaatggcagggctctgag--aaac--agccccgtgaaaaggtttcactccctctctatttctggacaaatgtgatgTGCGTTTCGATGTGACTCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16357486 349 - 16847902 cctcctcagcgagggct----ctc--------------ttggcc-------------------------------gccctgtctaaaa---------------------tggcacattc----------------------acccacacttcctgtt------------------------------tgccttcactgctttatttttttctccttagcatttataattactcaa-------catattttataattttcacaggtatcttttt-tattatt---------------------------------------------------cattcatgactgtatcctcactacccagagcaatgcc--agccactta------gctcaataaatatttgttaaatgaTAGATTGAATGGATGTGTGAACCAACTatgaaatggaaatggcagggctccgag--aaac--agccccgtgaaaaggtttcactccctgtctatttctggacaaatgtgatgtgcgtttcgatgtgactctc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91330107 349 + 91754291 cctcctcagtgagggct----ctc--------------tgggct-------------------------------gccctgtctaaaa---------------------tggcacattc----------------------acccacacttcctgtt------------------------------tgccttccctgctttatttttttctccttagcatttataattactcaa-------catattttataattttcacaggtatcttttt-tattatt---------------------------------------------------cattcatgactgtatccttactacccagagcaatgcc--agccactta------gctcaataaatatttgttaaatgactgaCTGAATGGATGTGTGAACCAACTatgaaatggaaatggcagggctccaag--aaac--agaccagtgaaaaggtttcactccctctctatttctggacaaatgtgatgtccgtttagatgtgaccctc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1394912 349 + 1977891 cctcctcagcgagggct----ctc--------------ttggcc-------------------------------gccctgtctaaaa---------------------tggcacattc----------------------acccacacttcctgtt------------------------------tgccttccctgctttatttttttctccttagcatttataattactcaa-------catattttataattttcacaggtatcttttt-tattatt---------------------------------------------------aattcatgactgtatcctcactacccagagcaatgcc--agccactta------gcccaataaatatttgttaaatgaCAGATTGAATGGATGTGTGAACCAactatgaaatggaaatggcagggctccgag--aaac--agacctgtgaaaaggtttcactccctctctctttctggacaaatgtgatgtgcatttcgatgtgaccctc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7336230 349 - 7796314 cctcctcagcgagggct----ctc--------------ttggcc-------------------------------gccctgtctaaag---------------------tggcacattc----------------------acccacacttcctgtt------------------------------tgccttccctgctttatttttttctccttagcatttataattactcaa-------catattttataattttcacaggtatcttttt-tattatt---------------------------------------------------cattcatgactgtatcctcactacccagagcaatgcc--agccactta------gctcaataaatatttgttaaatgactgaCTGAATGAATGCGCGAACCAACTatgaaatggaaatggcagggctccgag--aaac--agtcccgtgaaaaggtttcactccctctctgtttctggacaaatgcgatgtccgtttagatgtgaccctc i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 188018 460 + 608964 ----cctggcagtgcctgtggctcaaaagggtagggcgctggccccatatgccggaggtggcgggttcaaacccagccccggccaaaaactgaaaggtagctattccagtgcccccttctcagcgtgcctctctcagttataccttctctgcctttttttctttttcaaagacagccacagaagttatgacttccctgcttt--ctttttctccttagcatttttaactacttaa-------tatattttataattttcataagtatc-tttt-tgttatt---------------------------------------------------tgtccattgccacatcctcattacctagaacagcgcc--agctagatagtaggtgctcaataaatactcattaaatggctga------------atGAACAAgcaatgataaggaaatagcagggctcctag--aaacagagacccgtgaaaaggtcttaccccctctctgtttccagactactgtgctatctatccggacattactgtc i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32770756 301 + 98207768 -----------------------C--------------CAGACT-------------------------------GCCATGTCTTTTA---------------------TTTCACGTTT----------------------ATTCACAC--------------------------------------CCCCTTTCCTGA-----TTTTTTTTTTTTAGCATTTCTAACTAGTAAGAGCATCTTATAATTTATAATTCCCTTAAGCCTCTTTTTCTATCACT---------------------------------------------------TGTTCATTGCTATAG-----------AGATTAGGGCC--ATCTGTATATCACATGCTCAATACATCT--------------ATTGATGAAACTTAttaatatgcaatgggatggaaataataggcttccaag--atac--ggagctttgagagagcttgac-----ctctctttctgggaagatggaatgtccatctacataccacactc i mm10.chr16 C 0 C 0 s canFam3.chr33 2303932 317 - 31377067 cctcctccgcaatgccc----ttc--------------ttggcc-------------------------------ggcctgcccaaa----------------------tctcacattt----------------------acccatacttcctatt------------------------------tgccgtccctgctttgtttttttctcctcagcatttataactatctag-------catatttcctagtttccataggtatccttct-cagtact----------------------------------------------------gtttactgctgtgtcctcactacctagagccctacc--agccatacggtaggcgctcagtgcgtgt--gttcagcgactgaCCGAATGACTG--------AACAGGGAAATGGAAATTGCATGTC-----------C--A---CCGTG--------------TTcctctatttcctggcaaatgcaatgcccatctggagatcaccctc i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2681781 370 - 6579706 ccttctcagtgaggcct----ttc--------------ttggct-------------------------------accctatccaaaa---------------------tttcataccc----------------------acttacacttcctatt------------------------------caccgcccctgctttg-ttttttctccttagcatttacaact-------------aacattttataattttcatacctatctgtct-tattctttttcccctacaaaactataagctccacaagagcagagatttttttctgttttgttcattggtgtgtcctcactacctagaacagtcacttagtgatatagtaggtgctcagtaagaatttgtcaaaagactgaatGAATGAACA--------AACAAGGAAAAGGGAATAGCAAGGTTCCAAAACAGAG--AGACCAGTGAAAAGACTTAAGTTCCTGTC-----------AAATTCAGTGCCCGTC-------------- i dasNov3.JH569502 I 460 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e micMur3.chr1 88367360 766 + 114275543 I e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e gorGor5.CYUI01001831v1 18091 692 + 55620 I a score=52286.000000 s hg38.chr3_KI270934v1_alt 34789 8 + 163458 CAGGTTTt s panTro5.chr3 2501432 8 - 202621043 CAGGTTTt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96024 8 - 190779 CAGGTTTt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2813309 8 - 123690457 catgtttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2319441 8 - 204787373 caggtttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192385194 8 - 192460366 caggtttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19124275 8 - 19675229 CAGGTTTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16357835 8 - 16847902 caggtttt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91330456 8 + 91754291 caggTTTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1395261 8 + 1977891 caggtttt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7336579 8 - 7796314 caggtttt i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 188478 8 + 608964 aaggtttt i otoGar3.GL873829 C 0 I 97 s mm10.chr16 32771057 8 + 98207768 atgggttt i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2682151 8 - 6579706 TAGGTCTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e micMur3.chr1 88367360 766 + 114275543 I e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e canFam3.chr33 2304249 0 - 31377067 C e gorGor5.CYUI01001831v1 18091 692 + 55620 I a score=8572.000000 s hg38.chr3_KI270934v1_alt 34797 6 + 163458 gtgcgt s panTro5.chr3 2501440 6 - 202621043 gtgcat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96032 6 - 190779 gtgcat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2813317 6 - 123690457 ggtttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2319449 6 - 204787373 tttcgt i rheMac8.chr2 C 0 I 31 s macFas5.chr2 192385202 6 - 192460366 tttcgt i macFas5.chr2 C 0 I 31 s macNem1.NW_012014355v1 19124283 6 - 19675229 TTTCGt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16357843 6 - 16847902 tttcgt i cerAty1.NW_012004056v1 C 0 I 31 s chlSab2.chr15 91330464 6 + 91754291 tttctt i chlSab2.chr15 C 0 I 32 s manLeu1.NW_012102020v1 1395269 6 + 1977891 tttctt i manLeu1.NW_012102020v1 C 0 I 32 s colAng1.NW_012118932v1 7336587 6 - 7796314 tttctt i colAng1.NW_012118932v1 C 0 I 22 s mm10.chr16 32771065 6 + 98207768 cagctt i mm10.chr16 C 0 I 105 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e micMur3.chr1 88367360 766 + 114275543 I e dasNov3.JH569502 2682159 0 - 6579706 C e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e canFam3.chr33 2304249 0 - 31377067 C e otoGar3.GL873829 188486 97 + 608964 I e gorGor5.CYUI01001831v1 18091 692 + 55620 I a score=-623.000000 s hg38.chr3_KI270934v1_alt 34803 3 + 163458 gtg- s panTro5.chr3 2501446 3 - 202621043 gtg- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96038 3 - 190779 gtg- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2813323 3 - 123690457 gtt- i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19124289 3 - 19675229 -ttt i macNem1.NW_012014355v1 C 0 I 26 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e mm10.chr16 32771071 105 + 98207768 I e micMur3.chr1 88367360 766 + 114275543 I e dasNov3.JH569502 2682159 0 - 6579706 C e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e canFam3.chr33 2304249 0 - 31377067 C e otoGar3.GL873829 188486 97 + 608964 I e colAng1.NW_012118932v1 7336593 22 - 7796314 I e manLeu1.NW_012102020v1 1395275 32 + 1977891 I e chlSab2.chr15 91330470 32 + 91754291 I e cerAty1.NW_012004056v1 16357849 31 - 16847902 I e macFas5.chr2 192385208 31 - 192460366 I e rheMac8.chr2 2319455 31 - 204787373 I e gorGor5.CYUI01001831v1 18091 692 + 55620 I a score=-384.000000 s hg38.chr3_KI270934v1_alt 34806 11 + 163458 tgtgtgtgtg--------------------------------t s panTro5.chr3 2501449 43 - 202621043 tgtgtgtgtgcgtgtgtgcgtgcgtgtgtgtgtgtgtgtgtTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96041 39 - 190779 tgtgtgtgtgcgtgtgtgcgtgcgtgtgtgtgtgtgtT----T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2813326 24 - 123690457 ttattttgt---------------tttttttttgtttt----t i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e mm10.chr16 32771071 105 + 98207768 I e micMur3.chr1 88367360 766 + 114275543 I e dasNov3.JH569502 2682159 0 - 6579706 C e macNem1.NW_012014355v1 19124292 26 - 19675229 I e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e canFam3.chr33 2304249 0 - 31377067 C e otoGar3.GL873829 188486 97 + 608964 I e colAng1.NW_012118932v1 7336593 22 - 7796314 I e manLeu1.NW_012102020v1 1395275 32 + 1977891 I e chlSab2.chr15 91330470 32 + 91754291 I e cerAty1.NW_012004056v1 16357849 31 - 16847902 I e macFas5.chr2 192385208 31 - 192460366 I e rheMac8.chr2 2319455 31 - 204787373 I e gorGor5.CYUI01001831v1 18091 692 + 55620 I a score=910.000000 s hg38.chr3_KI270934v1_alt 34817 1 + 163458 T s panTro5.chr3 2501492 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96080 1 - 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 18783 1 + 55620 T i gorGor5.CYUI01001831v1 I 692 C 0 s nomLeu3.chr11 2813350 1 - 123690457 t i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e mm10.chr16 32771071 105 + 98207768 I e micMur3.chr1 88367360 766 + 114275543 I e dasNov3.JH569502 2682159 0 - 6579706 C e macNem1.NW_012014355v1 19124292 26 - 19675229 I e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e canFam3.chr33 2304249 0 - 31377067 C e otoGar3.GL873829 188486 97 + 608964 I e colAng1.NW_012118932v1 7336593 22 - 7796314 I e manLeu1.NW_012102020v1 1395275 32 + 1977891 I e chlSab2.chr15 91330470 32 + 91754291 I e cerAty1.NW_012004056v1 16357849 31 - 16847902 I e macFas5.chr2 192385208 31 - 192460366 I e rheMac8.chr2 2319455 31 - 204787373 I a score=1252493.000000 s hg38.chr3_KI270934v1_alt 34818 231 + 163458 gacggagtttcgctcttgttgcccaggctggagtgcagtgacgtgatctcggctcgtcgcaacctctgcttcccgggttcaagcgattcttctgtttcagcctcctgaatagctgagattacaggcacccgccaccatgcctgactaa-ttttgtatttttagtagagacagggtttcaccatgttggtcaggctggtcg-cgaactcctgacctc-aggttatccaccggcct s panTro5.chr3 2501493 231 - 202621043 gatggagtttcgctcttgttgcccaggctggagtgcagtgatgtgatctcggctcatcgcaacctctgcctcccgggttcaagcgattcttctgtttcagcctcctgagtagctgagattacaggcatcctccaccatgcctgactaa-ttttgtatttttagtagagacagggtttcaccatgttggtcaggctggtcg-cgaactcccgacctc-aggttatccaccggcct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96081 231 - 190779 gatggagtttcgctcttgttgcccaggctggagtgcagtgatgtgatctcggctcatcgcaacctctgcctcccgggttcaagcgattcttctgtttcagcctcctgagtagctgagattacaggcaccctccaccatgcctgactaa-ttttgtatttttagtagagacagggtttcaccatgttggtcaggctggtcg-cgaactcccgacctc-aggttatccaccggcct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 18784 231 + 55620 gacggagttttgctcttgttgcccaggctggagtgcagtgatgtgatctcggctcatcacaacctctgcctcccgggttcaagcgattcttctgtttcaccctcctgagtagctgagattacaggcacccgccaccatgcctgactaa-ttttgtatttttagtagagacagggtttcaccatgttggtcaggctggtca-cgaactcctgaccgc-aggtgatccaccgtcct i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2813351 231 - 123690457 gatggagtttcgctcttgttgcccaggctggagtgcaatggtgcaatctcggctcatcacaacctctgcctcctgggttcaagcgattctcctgcttcagcctcctgagtagctgagattacaggcacccgccaccatgcctgactaa-ttttgtatttttagtagagacagggtttcaccatgttggtcaggctgggct-cgaactcccaacctc-aggtgatccgccggcct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2319486 232 - 204787373 gatggagtttcactcttgttgcccaggctggagtgcaatggcgtgatctcggctcacggcaacctctgcctcccgggttcaagctattctcctgcttcagcctcctgagtagctgggattacaggtgcccgtcactacgcctgactaatttttgtatttttagtagagacggggtttcaccatgttggtcaggctggtct-tgaactcccgacctc-aggtgatctgccggcct i rheMac8.chr2 I 31 C 0 s macFas5.chr2 192385239 231 - 192460366 gatggagtttcactcttgttgcccaggctggagtgcaatggcgtgatctcggctcacggcaacctctgcctcccgggttcaagcgattctcctgcttcagcctcctgagtagctgggattacaggtgcctgtcactacgcctgactaa-ttttgcatttttagtagagacggggtttcaccatgttggtcaggctggtct-tgaactcccgacctc-aggtgatctgccggcct i macFas5.chr2 I 31 C 0 s macNem1.NW_012014355v1 19124318 233 - 19675229 gatggagtttcactcttattgcccaggctggagtgcagtggcgtgatcccggctcacggcaacctctgccctccgggttcaagctattctcctgcttcagcctcctgagtagctgggattacaggtgcctgtcactacgcctgactaatttttgtatttttagtagagacggggtttcaccatgttggtcaggctggtctctgaatcaccgacctcaaggtgatctg-caccct i macNem1.NW_012014355v1 I 26 C 0 s cerAty1.NW_012004056v1 16357880 231 - 16847902 gatggagtttcactcttgttgcccaggctggagtgcagtggcgtgatctcggctcacggcaacctctgcctcccgggttcaagcgattctcctgcttcagcctcctgagtagctgggattacaggtgcccgtcactacgcctgactaa-ttttgcatttttagtagagacggggtttcaccatgttggtcaggctggtct-tgaactcccgacctc-aggtgatctgccggcct i cerAty1.NW_012004056v1 I 31 C 0 s chlSab2.chr15 91330502 227 + 91754291 gacggggtttcactcttgttgcccaggctggagtgcagtggcatgatctcagctcacggcaacctctgcctcccgagttcaagcgattctcctgcttcagcctcctgagtagctgggattacaggtgcccgtcaccatgc----ctaa-ttttgcatttttagtagagacagagtttcaccatgttggtcagcctggtct-tgaactcccgacctc-aggtgatctgctggcct i chlSab2.chr15 I 32 C 0 s manLeu1.NW_012102020v1 1395307 231 + 1977891 gatggagtttcactcttgttgcccaggctggagtgcagtggcatgatctcggctcacggcaacctctgcctcctgggttcaagtgattctcttgcttcagcctcctgagtagctgggattacaggtgcccatcaccatgcctgactaa-ttttgcatttttagtagagacagggtttcaccatgttggtcaggctggtct-tgaactcccgacctc-aggtgatctgccggcct i manLeu1.NW_012102020v1 I 32 C 0 s colAng1.NW_012118932v1 7336615 231 - 7796314 gacagagtttcactcttgttgcccaggctggagtgcagtggcgtgatcttggctcaccgcaacctctgcctcctgggttcaagccattctcctgcttcagcctcctgagtagctgggattacaggtgcccgtcaccatgcctgactaa-ttttgcatttttagtagagacagggtttcaccatgttggtcaggctggtct-tgaactcccgacctc-aggtgatctgccggcct i colAng1.NW_012118932v1 I 22 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e mm10.chr16 32771071 105 + 98207768 I e micMur3.chr1 88367360 766 + 114275543 I e dasNov3.JH569502 2682159 0 - 6579706 C e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e canFam3.chr33 2304249 0 - 31377067 C e otoGar3.GL873829 188486 97 + 608964 I a score=180493.000000 s hg38.chr3_KI270934v1_alt 35049 31 + 163458 cggcctcccaaag-tgctgggattacagacat s panTro5.chr3 2501724 31 - 202621043 cggcctcccaaag-tgctgggattacagacat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96312 31 - 190779 cggcctcccaaag-tgctgggattacagacat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19015 31 + 55620 cggcctcccaaag-tgctgggatgacagacat i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2813582 31 - 123690457 cggtctcccaaag-tgctgggattacaggcat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2319718 31 - 204787373 cggcctcccaaag-tgctgggattacaggcat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192385470 31 - 192460366 cggcctcccaaag-tgctgggattacaggcat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19124551 32 - 19675229 cggcctcccaaagttgctgggattacaggcat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358111 31 - 16847902 cggcctcccaaag-tgctgggattacaggcat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91330729 31 + 91754291 cggcctcccaaag-tgctgggattacaggcat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1395538 31 + 1977891 cggcctcccaaag-tgctgggattataggcgt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7336846 31 - 7796314 cagcctcccaaag-tgctgggattacaggcgt i colAng1.NW_012118932v1 C 0 C 0 s mm10.chr16 32771176 23 + 98207768 cgttcttccagag-gacctgggtt-------- i mm10.chr16 I 105 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e micMur3.chr1 88367360 766 + 114275543 I e dasNov3.JH569502 2682159 0 - 6579706 C e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e canFam3.chr33 2304249 0 - 31377067 C e otoGar3.GL873829 188486 97 + 608964 I a score=51270.000000 s hg38.chr3_KI270934v1_alt 35080 12 + 163458 gagacacc-----CAGC s panTro5.chr3 2501755 12 - 202621043 gagacacc-----CAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96343 12 - 190779 gagacacc-----CAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19046 12 + 55620 gagacacc-----CAGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2813613 12 - 123690457 gagacacc-----cagc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2319749 17 - 204787373 gagacaccacgcccggc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192385501 17 - 192460366 gagacaccacgcccggc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19124583 14 - 19675229 gagacaccacgc---GC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358142 17 - 16847902 gagacaccacgcccggc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91330760 17 + 91754291 gagataccacgcccggc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1395569 17 + 1977891 gagacaccacgcccggc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7336877 17 - 7796314 gagacaccacgcccggc i colAng1.NW_012118932v1 C 0 C 0 s mm10.chr16 32771199 11 + 98207768 ------cagtttctagc i mm10.chr16 C 0 C 0 s canFam3.chr33 2304249 12 - 31377067 gtggctcc-----tagc i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e micMur3.chr1 88367360 766 + 114275543 I e dasNov3.JH569502 2682159 0 - 6579706 C e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e otoGar3.GL873829 188486 97 + 608964 I a score=6685.000000 s hg38.chr3_KI270934v1_alt 35092 1 + 163458 A s panTro5.chr3 2501767 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96355 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19058 1 + 55620 A i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2813625 1 - 123690457 a i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2319766 1 - 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192385518 1 - 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19124597 1 - 19675229 A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358159 1 - 16847902 a i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91330777 1 + 91754291 a i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1395586 1 + 1977891 a i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7336894 1 - 7796314 a i colAng1.NW_012118932v1 C 0 C 0 s mm10.chr16 32771210 1 + 98207768 a i mm10.chr16 C 0 C 0 s canFam3.chr33 2304261 1 - 31377067 c i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2682159 1 - 6579706 A i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e micMur3.chr1 88367360 766 + 114275543 I e saiBol1.JH378146 17258820 453 - 17725628 I e calJac3.chr17 73808803 452 + 74750902 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e otoGar3.GL873829 188486 97 + 608964 I a score=251084.000000 s hg38.chr3_KI270934v1_alt 35093 61 + 163458 CCCTTCA----GGTTTTCAGCC--CTTTGCCAAAGGTACAACCCTTTGGTCTAAGGGTACAACCCTT s panTro5.chr3 2501768 42 - 202621043 CCCTTCA----GGTTTTCAGCC--CTTTGCCAAAGGTACAACCCTTTG------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96356 61 - 190779 CCCTTCA----GGTTTTCAGCC--CTTTGCCAAAGGTACAACCCTTTGGTCTAAGGGTACAACCCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19059 41 + 55620 CCCTTCA----GGTTTTCAGCC--CTTTGCCAAAGGTACAACCCCTT-------------------- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2813626 38 - 123690457 cccttca----ggttttcagcc--ctttgccaaaggtacaaccc----------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2319767 38 - 204787373 cccttca----ggttttcagcc--ctttgccaaaggtacaactc----------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192385519 38 - 192460366 cccttca----ggttttcagcc--ctttgccgaaggtacaactc----------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19124598 38 - 19675229 CCCTTCA----GGTTTTCAAGC--CTTTGCCGAAGGTACAACTC----------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358160 38 - 16847902 cccttca----ggttttcagcc--ctttgccgaaggtacaactc----------------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91330778 38 + 91754291 cccttca----ggttttcagtc--ctttgccaaaggtacaactc----------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1395587 38 + 1977891 cccttca----ggttttcagcc--ctttgccgaaggtacaactc----------------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7336895 38 - 7796314 cccttca----ggttttcagcc--ctttgccaaaggtacaactc----------------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73809255 38 + 74750902 ccctcca----ggttttcagcc--ctttgccaaaggcacaactc----------------------- i calJac3.chr17 I 452 C 0 s saiBol1.JH378146 17259273 38 - 17725628 cccgcca----ggctctcagcc--ctttgccaaaggcacagctc----------------------- i saiBol1.JH378146 I 453 C 0 s mm10.chr16 32771211 36 + 98207768 -cccacatggcagctcacaaccatctttaactccagt------------------------------ i mm10.chr16 C 0 C 0 s canFam3.chr33 2304262 20 - 31377067 ------------------------ctcttccaagggcaaaactc----------------------- i canFam3.chr33 C 0 I 6 s dasNov3.JH569502 2682160 29 - 6579706 CCCTCAT----GGTCTTCAGCC--ATCTTCCAAGC-------------------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e micMur3.chr1 88367360 766 + 114275543 I e cebCap1.NW_016107444v1 6347051 581 + 6778120 I e otoGar3.GL873829 188486 97 + 608964 I a score=191217.000000 s hg38.chr3_KI270934v1_alt 35154 23 + 163458 TGTAATGGTCCAAACAAATCTGC s panTro5.chr3 2501810 21 - 202621043 --TAATGGTCTAAACAAATCTGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96417 23 - 190779 TGTAATGGTCTAAACAAATCTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19100 23 + 55620 TGTAATGGTCTAAACAAATCTGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2813664 23 - 123690457 tgtaatggtctaaacagatctgC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2319805 23 - 204787373 tgtaacggtctaaacaaatctgC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192385557 23 - 192460366 tgtaatggtctaaacaaatctgC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19124636 20 - 19675229 -GTAACGG-CTAAACAAATCTG- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358198 23 - 16847902 tgtaatggtctaaacaaatctgC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91330816 23 + 91754291 tgtaatggtctaaacaaatctgC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1395625 23 + 1977891 tgtaatggtctaaacaaatctgC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7336933 23 - 7796314 tgtaatggtccaaacaaatctgC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73809293 23 + 74750902 tgtgatgatctaaacAAGCGTGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17259311 21 - 17725628 tgtgatggtctaaacaa--tTGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6347632 23 + 6778120 tgtgatggtctaaacaagcctgC i cebCap1.NW_016107444v1 I 581 C 0 s mm10.chr16 32771247 21 + 98207768 tgcaatggatccaacaccttc-- i mm10.chr16 C 0 C 0 s canFam3.chr33 2304288 17 - 31377067 ------ggtctgaataaccctgg i canFam3.chr33 I 6 C 0 s dasNov3.JH569502 2682189 21 - 6579706 --TGATGATCTGAATAACCCTGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e micMur3.chr1 88367360 766 + 114275543 I e otoGar3.GL873829 188486 97 + 608964 I a score=548761.000000 s hg38.chr3_KI270934v1_alt 35177 54 + 163458 TCTCTAATTCACTT----------------TTTGTCAT-A-CCCAGCATAGCACTGT-GTTCAGGAAAGAATC s panTro5.chr3 2501831 54 - 202621043 TCTCTAATTCACTT----------------TTTGTCAT-A-CCCAGCATAGCACTGT-GTTCAGGAAAGAATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96440 54 - 190779 TCTCTAATTCACTT----------------TTTGTCAT-A-CCCAGCATAGCACTGT-GTTCAGGAAAGAATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19123 54 + 55620 TCTCTAATTCACTT----------------TTCGTCAT-A-CCCAGCATAGCACTGT-ATTCAGGAGAGAATC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2813687 54 - 123690457 TCTCTAATTCACTT----------------TTTGTCAT-A-CCCAGCATAGCACCAT-GTTCAGGAAAGAATC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2319828 54 - 204787373 TCTCGAATTCGCTT----------------TTTGTCAT-A-CCCAGCATAGCACCAT-GTTCAGGAAAGAATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192385580 54 - 192460366 TCTCGAATTCGCTT----------------TTTGTCAT-A-CCCAGCATAGCACCAT-GTTCAGGAAAGAATC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19124656 54 - 19675229 -CTCGAATTCGCTT----------------TTTGTCATAA-CCCAGCATAGCACCAA-GTTCAGGAAAGAATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358221 54 - 16847902 TCTCTAATTCACTT----------------TTTGTCAT-A-CCCAGCATAGCACCAT-GTTCAGGAAAGAATC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91330839 54 + 91754291 TCTCTAATTCGCTT----------------TTTGTCAT-A-CCCAGCATAGCACCAT-GTTCAGGAAAGAATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1395648 54 + 1977891 TCTCTAATTCACTT----------------TTTGTCAT-A-CCCAGCATAGCACCAT-GTTCAGGAAAGAATC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7336956 52 - 7796314 TTTCTG--TCACTT----------------TTTGTCAT-A-CCCAGCATAGTACCAT-GTTCAGGAAAGAATC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73809316 54 + 74750902 TCTGTAATTCACTT----------------TTTGCCAC-A-CCCGGCATAGCACTGT-GTTCAGGAAAGAATA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17259332 55 - 17725628 TCTGCAATTCACTT----------------TTTGTCAC-ACCCCAGCACAGCACTGT-GTTCAGGAAAGATTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6347655 54 + 6778120 TCTGTAATTCACTT----------------TTTGTCAC-A-CCCAGCATAGCAGTGT-GTTCAGGAAAGATTA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88368126 54 + 114275543 TCTCTGACTCACTT----------------TGTGCCAT-G-CCCAGCATAGCACTCT-TTTCAGGAAAGAGCT i micMur3.chr1 I 766 C 0 s mm10.chr16 32771268 65 + 98207768 acaccgacacacgtacatacaagcaaaaacattgacgt-a-cacacaataaaaataCAGTTC------TAATT i mm10.chr16 C 0 I 1 s canFam3.chr33 2304305 54 - 31377067 ttccTGATTCACTT----------------TGTACCAC-G-CCCAGCAGAGCGCTCT-GATCAGGAGAGAGCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2682210 54 - 6579706 TCTTTGATTCACTT----------------TGTGCCAT-G-CCCTGACTAGCACTGT-GTTCAGCAAAGAAGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e otoGar3.GL873829 188486 97 + 608964 I a score=79913.000000 s hg38.chr3_KI270934v1_alt 35231 8 + 163458 TGAAAGG-A s panTro5.chr3 2501885 8 - 202621043 TGAAAGG-G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96494 8 - 190779 TGAAAGG-A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19177 9 + 55620 TGAAAGGCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2813741 8 - 123690457 TGAAAGG-A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2319882 8 - 204787373 CGAAAGG-A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192385634 8 - 192460366 CGAAAGG-A i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19124710 8 - 19675229 CGAAAGG-A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358275 8 - 16847902 CGAAAGG-A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91330893 8 + 91754291 CGAAAGG-A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1395702 8 + 1977891 CGAAAGG-A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337008 8 - 7796314 CAAAAGG-A i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73809370 9 + 74750902 TGAAAGGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17259387 9 - 17725628 TGAAAGGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6347709 9 + 6778120 TGAAAGGAA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88368180 8 + 114275543 TGAAAGG-A i micMur3.chr1 C 0 I 17 s otoGar3.GL873829 188583 8 + 608964 TGAAAGG-A i otoGar3.GL873829 I 97 C 0 s mm10.chr16 32771334 8 + 98207768 TAAAAGA-A i mm10.chr16 I 1 C 0 s canFam3.chr33 2304359 8 - 31377067 TGACCTG-A i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2682264 8 - 6579706 TGAAATG-A i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I a score=141771.000000 s hg38.chr3_KI270934v1_alt 35239 23 + 163458 GCTCTTTTTGAGGAGGTGGGGG--G s panTro5.chr3 2501893 23 - 202621043 GCTCTTTTTGAGGAGGTGGGGG--G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96502 23 - 190779 GCTCTTTTTGAGGAGGTGGGGG--G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19186 23 + 55620 GCTCTTTTTGAGGAGGTGGGGG--G i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2813749 21 - 123690457 GCTC--TTTGAGGAGGTGGGGG--G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2319890 23 - 204787373 GCTCTTTTGGAGGAGGCTGGGG--G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192385642 23 - 192460366 GCTCTTTTTGAGGAGGCTGGGG--G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19124718 23 - 19675229 GCTCTTTTTGAGGAGGCTGGGG--G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358283 23 - 16847902 GCTCTTTTTGAGGAGACTAGGG--G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91330901 25 + 91754291 GCTCTTTTTGAGGAGGCTGGGGGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1395710 23 + 1977891 ACTATTTTTGAGGAGGCTGGGG--G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337016 23 - 7796314 GCTCTTTTTGAGGAGGTTGGGG--G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73809379 22 + 74750902 ACTCTTTTTGAGGAGGT-GGGG--G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17259396 20 - 17725628 A--CTTTTTGAGGAGGT-GTGG--G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6347718 22 + 6778120 ACTCTTTTTGAGGAGGT-GGGG--G i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 188591 18 + 608964 AGCCTGCTTGAGGAGAAG------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32771342 21 + 98207768 --TATATACAAAAAGAAAAGGA--A i mm10.chr16 C 0 I 3 s canFam3.chr33 2304367 20 - 31377067 ACCCTGTCTGGGGAGGGAAG----- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2682272 22 - 6579706 ACCCTGTTTGAGGAAGAGGTAG--- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14777622 868 - 22200726 I e micMur3.chr1 88368188 17 + 114275543 I a score=18626.000000 s hg38.chr3_KI270934v1_alt 35262 2 + 163458 AG s panTro5.chr3 2501916 2 - 202621043 AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96525 2 - 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19209 2 + 55620 AG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2813770 2 - 123690457 AG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2319913 2 - 204787373 AG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192385665 2 - 192460366 AG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19124741 2 - 19675229 AG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358306 2 - 16847902 AG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91330926 2 + 91754291 AG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1395733 2 + 1977891 AG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337039 2 - 7796314 AG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73809401 2 + 74750902 AG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17259416 2 - 17725628 AC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6347740 2 + 6778120 AG i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14778490 2 - 22200726 AG i proCoq1.NW_012133858v1 I 868 C 0 s otoGar3.GL873829 188609 2 + 608964 AG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32771366 1 + 98207768 A- i mm10.chr16 I 3 C 0 s canFam3.chr33 2304387 2 - 31377067 AT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2682294 2 - 6579706 AG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88368188 17 + 114275543 I a score=504734.000000 s hg38.chr3_KI270934v1_alt 35264 33 + 163458 AGAAAGAG-GCTAAAGATTTGGCTAGGTGGGCAG s panTro5.chr3 2501918 33 - 202621043 AGAAAGAG-GCTAAAGATTTGGCTAGGTGGGCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96527 33 - 190779 AGAAAGAG-GCTAAAGATTTGGCTAGGTGGGCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19211 33 + 55620 AGAAAGAG-GCTAAAGATTTGGCTAGGTGGGCAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2813772 33 - 123690457 AGAAAGAG-GCTAAAGATTTGGCTAGGTGGGCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2319915 33 - 204787373 AGAGAGAG-GCTAAAGATTTGGCTAGGTGGGCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192385667 33 - 192460366 AGAGAGAG-GCTAAAGATTTGGCTAGGTGGGCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19124743 32 - 19675229 AGAGAGAG-GCTAAAGA-TTGGCTAGGTGGGCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358308 33 - 16847902 AGAGAGAG-GCTAAAGATTTGGCTAGGTGGGCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91330928 33 + 91754291 AGAGAGAG-GCTAAAGATTTGGCTAGGTGGGCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1395735 33 + 1977891 AGAGAGAG-GCTAAAGATTTGGCTAGGTGGGCAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337041 33 - 7796314 AGAGAGAG-GCTAAAGATTTGGCTAGGTGGGCAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73809403 34 + 74750902 AGAAAGAGAGCTGAAGATTTGGATAGGTGGGCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17259418 34 - 17725628 AGAAGGAGAACTAAAAATTTGGCTAGGTGGGCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6347742 34 + 6778120 AGAAAGAGAACTAAAGATTTGAACAGGTGGGCAG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88368205 33 + 114275543 AGAAAGAG-GCTAAAGATTTGGCCAGGTGAGCAG i micMur3.chr1 I 17 C 0 s proCoq1.NW_012133858v1 14778492 33 - 22200726 AGAAAGAG-GATAAAGATTTGGCCGGGTGGGCAG i proCoq1.NW_012133858v1 C 0 I 105 s otoGar3.GL873829 188611 33 + 608964 AGAGAGAG-GCTAAAGATTTGGCCAGGTGACCAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32771367 31 + 98207768 AAAGGGAG-TCTAAAGGTTAGAC--AGTGGGCAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2304389 33 - 31377067 AAAGCGAG-GGTAAGGATTTGGCCAGGTGGGCAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2682296 33 - 6579706 AAAAAGAG-GCTAAAGATTTGGCCAGGTGGGGAA i dasNov3.JH569502 C 0 C 0 a score=961400.000000 s hg38.chr3_KI270934v1_alt 35297 97 + 163458 TACAGTCCCAGCCTGCTGTGCGTCAGTC-G-AGAGCAGGTACACAGAATAATTCCTTCTTCCAGAGGTGGGTCACAGTCCTGGGAATGCCTCACACATA-- s panTro5.chr3 2501951 97 - 202621043 TACAGTCCCAGCCTGCTGTGCGTCAGTC-G-AGAGCAGGTACACAGAATAATTCCTTCTTCCAGAGGTGGGTCACAGTCCTGGGAATGCCTCACACATA-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96560 97 - 190779 TACAGTCCCAGCCTGCTGTGCGTCAGTC-G-AGAGCAGGTACACAGAATAATTCCTTCTTCCAGAGGTGGGTCACAGTCCTGGGAATGCCTCACACATA-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19244 97 + 55620 TACAGTCCCAGCCTGCTGTGCGTCAGTT-G-AGAGCAGGTACACAGAATAATTCCTTCTTCCAGAGGTGGGTCACAGTCCTGGGAATGCCTCACACATA-- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2813805 97 - 123690457 TACAGTCCCCGTCTGCTGTGCGTTACTC-G-AGAGCAGGTACACAGAATAATTCCTTCTTCCAGAGATGGGTCACAGTCCTGGGAAAGCCTCACACATA-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2319948 97 - 204787373 TACAGTCCCAGCCTGCTGTGCGTCAGTC-G-AGAGCGGGTACACAGAATAATTCCTTCTTCCAGAGGTGGGGCACAGTCCTGGGAATGCCTCACACATA-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192385700 97 - 192460366 TACAGTCCCAGCCTGCTGTGCGTCAGTC-G-AGAGCGGGTACACAGAATAATTCCTTCTTCCAGAGGTGGGGCACAGTCCTGGGAATGCCTCACACATA-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19124775 90 - 19675229 TAACGTCCCAGCCTGCTGT-CGTCAGTC-G-AGAGC-GGTACACAGAAT-ATTCCTTCTT-CAGAGGT-GGGCACAGCCT--GGGATGCCTCACACATA-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358341 97 - 16847902 TACAGTCCCAGCCTGCTGTGCGTCAGTC-G-AGAGCGGGTACACAGAATAATTCCTTCTTCCAGAGGTGGGGCACAGTCCTGGGAATGCCTCACACATA-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91330961 97 + 91754291 TACAGTCCCAGCCTGCTGTGCGTCAGTC-G-AGAGCAGGTACACAGAATAATTCCTTCTTCCAGAGGTGGGGCACCATCCTGGGAATGCCTCACACATA-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1395768 97 + 1977891 TACAGTCCCAGCCTGCTGTGCGTCAGTC-G-AGAGCAGGTACACAGAATAATTCCTTCTTCCAGAGGTGGGGCACAGTCCTGGGAATGCCTCACACATG-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337074 97 - 7796314 TACGGTCCCAGCCTGCTGTGTGTCAGTC-G-AGAGCAGGTACACAGAATAATTCCTTCTTCCAGAGGTGGGGCACAGTCCTGGGAATGCCTCACACGTA-- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73809437 98 + 74750902 CACAGTCCCAGCCTGCTGTTCATCGGTCTG-AGAGCAGGTACCCAGAATAGTTCCTTCTTCCAGAGGTGGGTCCCAGTCCTGGGAATGCCTCACGTATC-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17259452 98 - 17725628 CACAGTCCCAACCTGCTGTGTTTCGGTCTG-AGAGCAGGTACACAGAATAGTTCCTTCTTCCCGAGCTGGGTCCCAGTCCTGGGAACGCCTCACGTAGA-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6347776 86 + 6778120 CACAGTCCCAAGCTGCTGTGCTTCGGTCTG-AGAGCAG------------GCTCCTTCTTCCAGAGGTGGGTCCCAGTCCTGGGAACACCTCACATATA-- i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88368238 56 + 114275543 -ACAGCCCCAACCTG------------------------------------------CTTCCAGAGCTGGGTCACTATCCTGGGAATGCCTCACTCATA-- i micMur3.chr1 C 0 I 64 s otoGar3.GL873829 188644 56 + 608964 -ACAATCCCAACCAG------------------------------------------ATTCCAGAGGTGGCTCACAGACCTGGGAATGCCTCATTCATA-- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32771398 98 + 98207768 CACAAACCCAACATGCTCGGCACCATTT-GCAGAGCACAGAGGAAGACTGAGTTCTGCTCCCAGAGGCCGGCCGCAGGCGTGGTAAGGACTCGGAGGAA-- i mm10.chr16 C 0 C 0 s canFam3.chr33 2304422 98 - 31377067 TTCAACCCCCACCTGCTCTACAGAAATCTG-AAAGCAGGTACATGGAGTAATTCCTGCTTCCAGAGGTGGGTCCTAGCCCTGAGAACACCTCCCACAAA-- i canFam3.chr33 C 0 I 8 s dasNov3.JH569502 2682329 100 - 6579706 CACAACCAAAATCTGCTCTGCATAGGTATG-AAAGCAGGTACACAGAATAATTCCTGCTTCTGGAAGCGGTTCACCATCCTGGGAATGCCACACGCAGCCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14778525 105 - 22200726 I a score=673397.000000 s hg38.chr3_KI270934v1_alt 35394 70 + 163458 TTAGAGTT---GAGAA--AGAGAGGAGGCTGATAAAGCAGGAGACTGTCCTGCCTCGGAACCCCCATTCCCT---C-TT s panTro5.chr3 2502048 70 - 202621043 TTAGAGTT---GAGAA--AGAGAGGAGGCTGATGAAGCGGGAGACTGTCCTGCCTCGGAACCCCCGTTCCCT---C-TC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96657 70 - 190779 TTAGAGTT---GAGAA--AGAGAGGAGGCTGATGAAGCGGGAGACTGTCCTGCCTCGGAACCCCCGTTCCCT---C-TC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19341 70 + 55620 TTAGAGTT---GAGAA--AGAGAGGAGGCTGATAAAGCAGGAGACTGTCCTGCCTCGGAACCCTCATTCCCT---C-TT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2813902 70 - 123690457 TTAGAGTT---GAGAA--AGAGAGGAGGCTGATAAAGCAGGAGACTGTCCTGCCTGGGAACTCCCATTCCCT---C-TT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320045 70 - 204787373 TTAGATTT---GAGAA--AGAGAGGAGGCTGATAAAGCAGGAGACTGCCCTCCCTCGGAACCCCCATCCCCT---C-TT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192385797 70 - 192460366 TTAGATTT---GAGAA--AGAGAGGAGGCTGATAAAGCAGGAGACTGCCCTCCCTCGGAACCCCCATCCCCT---C-TT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19124865 70 - 19675229 TTAGATTT---GAGAA--AGAGAGGAGGCTGATAAAGCAGGA-ACTGCCCTCCCTCCGGAACCCCATCCCCT---CGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358438 70 - 16847902 TTAGAGTT---GAGAA--AGAGAGGAGGCTGATAAAGCAGGAGACTGCCCTCCCTCGGAACCCCCATCCCCT---C-TT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331058 70 + 91754291 TTAGAGTT---GAGAA--AGAGAGGAGGCTGATAAAGCAGGAGACTGCCCTCCCTCGGAACCCCCATCCCCT---C-TT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1395865 70 + 1977891 TTAGAGTT---GAGAA--AGAGAGGAGGCTGATAAAGCAGGCGACTGCCCTCCCTCGGAACCCCCATCCCCT---C-TT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337171 69 - 7796314 TTAGAGCT---GAGAA--AGAGAGGAGGCTGATAAAGCAGGAGACTGCCCTCCTTCGGAA-CCCCATCCCCT---C-TT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73809535 70 + 74750902 TTGTAGTT---GAGAA--GGAGAGGAGGCTGATGAAGCAGGAGACTGTCCCACCTCGGAACCCCCATCCCCT---C-TT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17259550 70 - 17725628 CTGTAGCT---GAGAA--AGAGACGAGGCTGATGAAGCAGGAGACTGTCCTGCCTTGGAACCCCCATCCCCT---C-TT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6347862 70 + 6778120 TTGTAGCT---GAGAA--AGAGAAGAGGCTGAGGAAGCAGGGGACTGTCCTGCCTTGGAACCCCCATCCCCT---C-TT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 188700 63 + 608964 -----GTT---GAGAAAGAGAGAGGAGACTGATCAGGCAGGTGCCTATCCTGCTTCTGA--CCCTGTCCCCT---C--- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32771496 67 + 98207768 ---GAGTCATGGGGAA--AGAGCAGAAA--GGGAAGAGTGGAGAGCGCCCTGT----GAATAACTAGTCTCCGTGC-TT i mm10.chr16 C 0 I 1 s canFam3.chr33 2304528 67 - 31377067 CTAGA------CAGAG--AGAGACGAGGCCCATGAGGCAAGAGAGTGTCCTGCCCCCAAACCCGAATCTCCT---G-TT i canFam3.chr33 I 8 C 0 s dasNov3.JH569502 2682429 67 - 6579706 GAGGATGG---GAGAA--CGAGAGGAGGCTAGTAAGCCAG---AGTGTCCTGCCTCAGACCCAGATTCTCCT---C-TT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14778525 105 - 22200726 I e micMur3.chr1 88368294 64 + 114275543 I a score=3645307.000000 s hg38.chr3_KI270934v1_alt 35464 284 + 163458 TGTGTTTCAGATCAGTACCCGCCCTCCATCAATGGTGGTCGTGTGATTGAAGCCTACAAGGGGCAGACCACGCTGATTCAGTACACCAGCAATGCTGAGGATGCCAACTTCACGCTCAGAGACAGCTGCACCGACTTGGAGCTCTTTGGTAGGACTATTTGGCTGGCTG---GGGAGAGTGGGGAGGTGGGTAGGGGATGAGGTCAGAGTCAAA-TTT---GGGAAATTCTGCATTGCTACACCCAGCAACACTTGCTGTCACTCTTTC-----ATTTGAATATCCAGGACCGGCA s panTro5.chr3 2502118 284 - 202621043 TGTGTTTCAGATCAGTTCCCGCCCTCCATCAATGGTGGTCGTGTGGTTGAAGCCTACAAGGGGCAGACCACGCTGATTCAGTACACTAGCAACGCCGAGGATGCCAACTTCACGCTCAGAGACAGCTGCACTGACTTGGAGCTCTTTGGTAGGAATATTTGGCTGGCTG---GGGAGAGCGGGGAGGTGGGTAGGGGATGAGGTCAGAGTCAAA-TTT---GGGAAATTCTGCATTGCTACACCCAGCAACACTTGCTGTCACTCTTTC-----ATTTGAATATCCAGGACCGGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96727 284 - 190779 TGTGTTTCAGATCAGTTCCCGCCCTCCATCAATGGTGGTCGTGTGGTTGAAGCCTACAAGGGGCAGACCACGCTGATTCAGTACACCAGCAACGCCGAGGATGCCAACTTCACGCTCAGAGACAGCTGCACTGACTTGGAGCTCTTTGGTAGGAATATTTGGCTGGCTG---GGGAGAGCGGGGAGGTGGGTAGGGGATGAGGTCAGAGTCAAA-TTT---GGGAAATTCTGCATTGCTACACCCAGCAACACTTGCTGTCACTCTTTC-----ATTTGAATATCCAGGACCGGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19411 284 + 55620 TGTGTTTCAGATCAGTACCCGCCCTCCATCAATGGTGGTCGTGTGGTTGAAGCCTACAAGGGACAGACCACGCTGATTCAGTACACCAGCAATGCTGAGGATGCCAACTTCACACTCAGAGACAGCTGTACCGACTTTGAGCTCTTTGGTAGGAATATTTGGCTGGCTG---GGGAGAGCGGGGAGGTGGGTAGGGGATGAGGTCAGAGTCAAA-TTT---GGGAAATTCTGCATTGCTATACCCAGCAACACTTGCTGTCACTCTTTC-----ATTTGAATATCCAGGACCGGCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2813972 285 - 123690457 TGTGTTTCAGATCAGTACCCACCCTCCATCAATGGTAGTCATGTGGTTGAAGCCTACAAGGGGCAGATCACGCTGATTCAGTACACCAGCAATGCAGAGGATGCCACCTTCACGCTCAGAGACAACTGTACCGACTTTAAGCTCTTTGGTAAGAATATTTGGCTGGCTG---AGGAGAGTGGGGAGGTGGGTAGGGGATGAGGTCGGAGTCAAACTTT---GGGAAATTCTGCACTGCTGTACCCAGCAACACTTGCTGTCAATCTTTC-----ATTCGAATATCCAGGACCGGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320115 280 - 204787373 TGTGTTTCAGATCAGTACCCGCCCTCCATCAATGGTGGTCATGTGGTTGAAGCCTACAAGGGGCAGACCACGCTGATTCAGTACACCAGCAACGCTGAGGATGCCACCTTCACGCTCAGAGACAACTGGACTGACTTTAAGCTCTTTGGTAAGAATGTTTG----GCTG---GGGAGAGTGGGGAGGTGGGTA-GGAATGAGGTCAGAGTCAAACTTT---GGGAAATTTTGCATCGCTATACCCAGCAAAACTTGCCATCACTCTTTC-----ATTTGAATATCCAGGACCAGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192385867 280 - 192460366 TGTGTTTCAGATCAGTACCCGCCCTCCATCAATGGTGGTCATGTGGTTGAAGCCTACAAGGGGCAGACCACGCTGATTCAGTACACCAGCAACGCTGAGGATGCCACCTTCACACTTAGAGACAACTGGACTGACTTTAAGCTCTTTGGTAAGAATGTTTG----GCTG---GGGAGAGTGGGGAGGTGGGTA-GGGATGAGGTCAGAGTCAAACTTT---GGGAAATTTTGCATCGCTATACCCAGCAAAACTTGCCATCACTCTTTC-----ATTTGAATATCCAGGACCAGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19124935 271 - 19675229 TGTGTTTCAGATCAGTA-CCGCCCTCCATCAATGGTGGTTGTGTGGTTGAAG-CTACAAGGGGCAGACCACGCTGATTCAGTACACCAGCAATGCTGAGGATGCCACCTTCACGCTCAGA-ACAACTGGACTGACTTTAAGCTCTTTGGTAAGAATGTTTG------CT---GGGAGAGTGGGGAGGT-GGTA-GGGATGAGGTCAGAGTCAAACTTT---GGGAAATTTTGCATGCGTATACCCAGC-AAACTTGCCGTCACTCTTTC-----A-TTGAATATCCAGGACC-GCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358508 281 - 16847902 TGTGTTTCAGATCAGTACCCGCCCTCCATCAATGGTGGTCGTGTGGTTGAAGCCTACAAGGGGCAGACCACACTGATTCAGTACACCAGCAACGCTGAGGATGCCACCTTCACGCTCAGAGACAACTGTACTGACTTTAAGCTCTTTGGTAAGAATGTTTG----GCTG---GGGAGAGTGGGGAGGTGGGTAGGGGATGAGGTCAGAGTCAAACTTT---GGGAAATTTTGCATCGCTATACCCAGCAAAACTTGCTGTCACTCTTTC-----ATTTGAACATCCAGGACCGGCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331128 280 + 91754291 TGTGTTTCAGATCAGTACCCGCCCTCCATCAATGGTGGTCGTGTGATTGAAGCCTACAAGGGGCAGACCACGCTGATTCAGTACACCAGCAACGCTGAGGATGCCACCTTCACACTCAGAGACAGCTGTACTGACTTTAAGCTCTTTGGTAAGAATGTTTG----GCTG---GGGAGAGTGGGGAGGTGGGTA-GGGATGAGGTCAGAGTCAAACTTC---GGGAAATTTTGCATTGCTATACCCAGCAAAACTTGCCGTCACTCTTTC-----ATTTGAATATCCAGGACCGGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1395935 281 + 1977891 TGTGTTTCAGATCAGTACCCGCCCTCCATCAATGGTGGTCGTGTGGTTGAAGCCTACAAGGGGCAGACCACACTGATTCAGTACACCAGCAACGCTGAGGATGCCACCTTCACGCTCAGAGACAACTGTACTGACTTTAAGCTCTTTGGTAAGAATGTTTG----GCTG---GGGAGAGTGGGGAGGTGGGTAGGGGATGAGGTCAGAGTCAAACTTT---GGGAAATTTTGCATTGCTATACCCAGCAAAACTTGCTGTCACTCTTTC-----ATTTGAACATCCAGGACCGGCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337240 281 - 7796314 TGTGTTTCAGATCAGTACCCGCCCTCCATCAATGGTGGTCGTGTGGTTGAAGCCTACAAGGGGCAGACCACGCTGATTCAGTACACCAGCAACGCTGAGGATGCCACCTTCACGCTCAGAGACAACTGTACTGACTTTAAGCTCTTTGGTAAGAATGTTTG----GCTG---GGGAGAGTGTGGAGGTGGGTAGGAGATAAGGTCAGAGTCAAACTTT---GGGAAATTTTGCATTGCTAAACCCAGCAAAACTTGCCGTCACTCTTTC-----ATTTGAATATCCAGGACTGGCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73809605 280 + 74750902 TGTCTTTCAGATCAGTACCCACCCTCCATCGAGGGTCGCCATGTGGTTGAAGCCTACAAGGGGCAGACCGTGCTGATTCAGTACACCAGCAATGCTGAGAATGTCACCTTCATGCTCAGAGACAATTGTACTGACTTGAAGCTCTTCGGTAAGAATGTTTG----ACTG---GGGAAAGTGGGGAGGTGGGTAGGGAATGAGGTCGGAATCAAACTTT---GGG-ATTTCTGCATCGCTATACCCAGCAAAACTTCCTGTCACTTGCTC-----ATTTGAATATCCAGGACTGGCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17259620 280 - 17725628 TGTGTTTCAGATCAGTACCCACCCTCCATCAAGGGCAGCCGTGTGGTTGAAGCGTACAAGGGGCAGACCGTGCTGATTCAGTACACCAGCAATGCTGAGGATGTCACCTTCATGCTCAGAGACAATTGTACTGACTTGAAGCTCTTCAGTAAGAATGTTTG----ACTG---GGGAAAGTGGGGAGGTGGGTAGGGGATGAGGTCAGAATCAGACTTT---GGG-ATTTTTGCATCACTATACCCAGCAAAACTTCCTGTCACTCTTTC-----ATTTGAATATCCAGGACTGGCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6347932 281 + 6778120 TGTGTTTCAGATCAGTACCCGCCCTCCATCGAGGGTAGCCCTGTGGTTGAAGCCTACAAGGGGCAGACCGTGCTGATTCAGTACACCAGCAATGCTGAGGATGTCACCTTCATGCTCAGAGACAATTGTACCGACTTTAAGCTCTTCGGTAAGAATGTTTG----ACTG---GGGAAAGTGGGGAGGTAGGTAGGGGATGAGGTCAGAATCAAACTTT---GGGAAATTTTGCATCGCTATACCCAGCAAAACTTCCTGTCACTCGTTC-----ATTTGAATATCCAGGACTGGCA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88368358 284 + 114275543 TGTGTTTCAGATAAGTACCCACCCACTATTAATGGATCTCATGTGCTTGAAGCCTACCGAGGGCAGACCAGGCTGTTTCAGTACACCAGCAACGCTGAGGATGTCACATTCTCTCTTGGAAACAACTGTGCTGATGTTAAGCTCTTTGGTAAAAATGTTTG----GCTGGGTGGGAGGTGGGGGGAGTGGGTAGAGGATGAGGTCAGAGTCAAACTTT---GGATAATTCTGCATTTCTATACCCAGCACAACTTCCTGTCACTTTTTC-----ATTTGAATATCCAGGACTGGCA i micMur3.chr1 I 64 C 0 s proCoq1.NW_012133858v1 14778630 283 - 22200726 TGTGTTTCAGATCAGTACCCGCCCTCTATCCATGGTCCTCATGTGCTTGAAGCCTATCGGGGGAATACCACGCTGTTTCACTACACCAGCAACGCTGAGGATGTCACATTCTCTCTTGGAAACCACTGCACTGACGTTAAGCTCTTTGGT-AAAATGTTTG----GCTGGGTGGGAGATGGTGGGAGTGGGTAGAGGATGAGGTCAGAGTCAAACTTG---GAGTAATTCTGCATTTCTATACCCAGCACAATTTCCTGTCCCTTTTTC-----ATTTGAATATCCAGGACTGGCG i proCoq1.NW_012133858v1 I 105 C 0 s otoGar3.GL873829 188763 277 + 608964 TGTGTTTCAGATCAGTACCCACCCTCTATCCATGGTTCTCAAGTGATCGAAGCCTACCAGGGGTGGACGGTGCAGTACCAGTACACCAGCGACGATAAGGATGCCGTGTTCTCACTCGAAAACAACCCTGATGATGTTAAGCTTTTTGGTAAAAATATTTG----GCTGGGTGGGAAGTGCGGGAGATGGGGAGGAGACAAAATCAGAGTCAAACTTG---GGGTCATTTTGCATCTCAACACCCAGCACAACTTTCTGCCACTTTTTC-----ATTTGAATATCCAAG------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32771564 265 + 98207768 TCTGTTTCAGATCAGTACCCACCCTCTATCAACTGCAGCAGCAAGATTCAAGCCTACAAGGGGCAGACAGTGACCACTGAGATCACCAGCAACTCTAAGGATGCCACACTCAGCCTCTCCAAGAAATGTAGTGGCTTTAAGCTCTTTGGTATGAATCTTTG----GCTG---GCAATAGGATGGGAG-------------------GAGTCAT--CTT---GGGCTGCCTTACGTCTCTTTATTCTGTACAGTGCCCTGCCTCTTTTTTTTTTAATTTGAATAATCAAGACCAACA i mm10.chr16 I 1 I 1951 s canFam3.chr33 2304595 271 - 31377067 TGTGTTTCAGATGAGTACCCCCCGTCGATCGAGGGTCCACAGGCGGTGCAAGCCTACCTGGGGCAGACCACGCTGGTTCAGTACACCAGCCACCCTGAGCACGTCACATTCACTCTGAGGAACAGCAATAGTGACTTCAAGCTCTTCGGTAAGAGCCCTTG----GGTG---CGG-------------GTGGAAGGGATGAGCTCAGAGTCAAGCTTTTTAAGGTAATTTTGCATTATCACGCCCTGGGCAATTTCATGTCACTTTTCC-----ACCGGAATATCTAGGACCAGCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2682496 242 - 6579706 TACGTTTCAGATCAGTACCCACCTTCTATCATGGGCCAGGATGTGATCAAAGCCTACAAAGGGCAGACGAGGTGGATCCAGTATACCAGTGACTCTGAGAACATCATGTTCACCCTTAGAAACCGCTCCAGTGACTTCACACTCTTTGGTAAGAATGCTTG----ACTG-------------------------GGGATAAAGTGAGAGCCAAGCCCT---GTG-----------CCCTGTGCC------AACTTACTGCCAGGTTTAC-----AGTTGAGTATCCAGGGGCAGCA i dasNov3.JH569502 C 0 C 0 a score=390665.000000 s hg38.chr3_KI270934v1_alt 35748 36 + 163458 TTTCCGAGGAGCGATATCTATAACTCAAATAGGTGC s panTro5.chr3 2502402 36 - 202621043 TTTCCGAGGAGCGATATCTATAACTCAGATAGGTGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97011 36 - 190779 TTTCCGAGGAGCGATATCTATAACTCAAATAGGTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19695 36 + 55620 TTTCTGAGGAGCGATATCTATAACTCAAATAGGTGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2814257 36 - 123690457 TTTCCGAGGAGCGATACCTATAACTCAAATAGGTGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320395 36 - 204787373 TTTCTGAGGAACGATACGTATAACTCAAATAGGTGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386147 36 - 192460366 TTTCTGAGGAACGATACGTATAACTCAAATAGGTGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125206 34 - 19675229 TTTCTGAGGAAC-ATACGTATAACTCAAATAGG-GC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358789 36 - 16847902 TTTCTGAGGAACGATACATATAACTCAAATAGGTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331408 36 + 91754291 TTTCTGAGGAACGATACATATAACTCAAATAGGTGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396216 36 + 1977891 TTTCTGAGGAACGATACATATAACTCAAATAGGTGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337521 35 - 7796314 TTTCTGAGGAATGATACGTATAACTCAAATA-GTGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73809885 36 + 74750902 TTTCTTTGGAATGATACCTATAACTCAAATAGGTGC i calJac3.chr17 C 0 I 332 s saiBol1.JH378146 17259900 36 - 17725628 TTTCTTTGGAACGACACCTATAACTCAAATAGGTGC i saiBol1.JH378146 C 0 I 315 s cebCap1.NW_016107444v1 6348213 36 + 6778120 TTTCTTTGGAACGATACCTATAACTCAAATAGGTGT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88368642 36 + 114275543 TCTCTTAGGAATGACACTGATAATTCAAACAGGTGC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14778913 36 - 22200726 TCTCTTAGGAATGACACTGATAATTCAAACAGGTGC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 189040 9 + 608964 ---------------------------AACAGGTTT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2304866 34 - 31377067 TTTCCGA-GAATGATCCCTATGATTCAGATAGGTG- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2682738 36 - 6579706 TTTCTTAGGAACGATACCTGTATTTCAAGTAGGTGC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32771829 1951 + 98207768 I a score=614199.000000 s hg38.chr3_KI270934v1_alt 35784 59 + 163458 CCCCCAGTAAGT-AGTAGTGACGGGCTTACGGCG-GTTTGGCCAGATAGCTAGAGTGACTC s panTro5.chr3 2502438 59 - 202621043 CCCCCAGTAAGT-AGTAGTGACGGGCTTATGGCG-GTTTGGCCAGATAGCTAGAGTGACTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97047 59 - 190779 CCCCCAGTAAGT-AGTAGTGACGGGCTTATGGCG-GTTTGGCCAGATAGCTAGAGTGACTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19731 59 + 55620 CCCCCAGTAAGT-AGTAGTGACGGGCTTATGGCG-GTTTGGCCAGATAGCTAGAGTGACTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2814293 59 - 123690457 CCCCCAGTAAGT-AGTAGTGACGGGCTTATGGCG-GTTTGGCCAGATAGCTACAGTGACTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320431 59 - 204787373 CCCCCAGTAAGT-AGTAGTGACAGGCTTATGGTG-ATTTGGTCAGATAGGTAGAGTGAATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386183 59 - 192460366 CCCCCAGTAAGT-AGTAGTGACAGGCTTATGGTG-ATTTGGTCAGATAGGTAGAGTGAATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125240 58 - 19675229 CCCCCAGTAAGT-AGTAGTGACAGGCTTATGGTG-ATTT-GTCAGATAGGTAGAGTGAATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358825 59 - 16847902 CCCCCAGTAAGT-AGTAGTGACAGGCTTATGGTG-ATTTGGTCAGATAGGTAGAGTGAATC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331444 59 + 91754291 CCCCCAGTAAGT-AGTAGTGACAGGCTTATGGTG-ATTTGGTCAGATAGGTAGAGTGAATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396252 59 + 1977891 CCCCCAGTAAGT-AGTAGTGACAGGCTTATGGTG-ATTTGGTCAGATAGGTAGAGTGAATC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337556 59 - 7796314 CTCCCAGTAAGC-AGTAGTGACAGGCTTATGGTG-ATTTGGTCAGATAGCTAGAGTGAATC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810253 60 + 74750902 CCCCCAGTAAGT-AGTAATGACAGGCTTATGGTGAATTTGGCCAGATAGGTAGAGTGACTC i calJac3.chr17 I 332 C 0 s saiBol1.JH378146 17260251 60 - 17725628 CCCCCAGTAAGT-AGTAATGACGGGCTTATGGTGAATTTGGCCAGATAGCTAGAGTGACTC i saiBol1.JH378146 I 315 C 0 s cebCap1.NW_016107444v1 6348249 5 + 6778120 CCCCC-------------------------------------------------------- i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88368678 59 + 114275543 TCCTAGGTGAAT-AGTAATGACAGGCTTAAGGCA-ATTTGGCCACATAGCTAGACTCACTC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14778949 58 - 22200726 TCCCAGGT-AAT-AGTCAGGACAGGCTTATGGCA-ATTTGGCCAGATAGCTAGACTCACTC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 189049 60 + 608964 CCCCTGGTAAATAAGTAACGACAGGCTTACGGCA-ATTTGGCCAGACAGCTAGACTCACTT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2304900 59 - 31377067 CCCCCAGTGAAC-AGCAGCGATGGCCTTCTGGAA-GTCTGGCCAGCGAGCAAAGCTGTCTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2682774 57 - 6579706 --CCCAGTGAAT-AATAGTGACAGGTTTATGGCA-ATCCAGCCAGCTAGTTAGACTGACTC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32771829 1951 + 98207768 I a score=64729.000000 s hg38.chr3_KI270934v1_alt 35843 7 + 163458 TGGGCAC s panTro5.chr3 2502497 7 - 202621043 TGGGCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97106 7 - 190779 TGGGCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19790 7 + 55620 TGGGCAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2814352 7 - 123690457 TGGACAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320490 7 - 204787373 TGGGCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386242 7 - 192460366 TGGGCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125298 6 - 19675229 T-GGCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358884 7 - 16847902 TGGGCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331503 7 + 91754291 TGGGCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396311 7 + 1977891 TGGGCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337615 7 - 7796314 TGGGCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810313 7 + 74750902 TGGGCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260311 7 - 17725628 TGGGCAC i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 88368737 7 + 114275543 TGAGCAC i micMur3.chr1 C 0 I 71 s proCoq1.NW_012133858v1 14779007 7 - 22200726 TGGGCCC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 189109 7 + 608964 TGGGCAA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2304959 6 - 31377067 GGGCCC- i canFam3.chr33 C 0 C 0 e mm10.chr16 32771829 1951 + 98207768 I e dasNov3.JH569502 2682831 0 - 6579706 C e cebCap1.NW_016107444v1 6348254 0 + 6778120 C a score=25994.000000 s hg38.chr3_KI270934v1_alt 35850 3 + 163458 ATA s panTro5.chr3 2502504 3 - 202621043 ACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97113 3 - 190779 ATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19797 3 + 55620 ACA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2814359 3 - 123690457 ACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320497 3 - 204787373 ATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386249 3 - 192460366 ATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125304 3 - 19675229 ATA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358891 3 - 16847902 ATA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331510 3 + 91754291 ATA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396318 3 + 1977891 ATA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337622 3 - 7796314 ATA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810320 3 + 74750902 ATA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260318 3 - 17725628 ACA i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 14779014 3 - 22200726 ATA i proCoq1.NW_012133858v1 C 0 I 11 s otoGar3.GL873829 189116 3 + 608964 ATA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2304965 3 - 31377067 GCG i canFam3.chr33 C 0 C 0 e mm10.chr16 32771829 1951 + 98207768 I e micMur3.chr1 88368744 71 + 114275543 I e dasNov3.JH569502 2682831 0 - 6579706 C e cebCap1.NW_016107444v1 6348254 0 + 6778120 C a score=104484.000000 s hg38.chr3_KI270934v1_alt 35853 12 + 163458 GAACTGATTCAA s panTro5.chr3 2502507 12 - 202621043 GAACTGATTCAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97116 12 - 190779 GAACTGATTCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19800 12 + 55620 GAACTGATTCAA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 2814362 12 - 123690457 GAACTGATTCAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320500 12 - 204787373 GAACTGATTCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386252 12 - 192460366 GAACTGATTCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125307 11 - 19675229 -AACTGATTCAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358894 12 - 16847902 GAACTGATTCAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331513 12 + 91754291 GAACTGATTCAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396321 12 + 1977891 GAACTGATTCAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337625 12 - 7796314 GAACTGATTCAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810323 12 + 74750902 GGACAGATTCAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260321 12 - 17725628 GAACAGATTCAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348254 1 + 6778120 -----------A i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 189119 12 + 608964 AAGTTTACTCAA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2304968 12 - 31377067 CAAGTGATTCAA i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14779017 11 - 22200726 I e mm10.chr16 32771829 1951 + 98207768 I e micMur3.chr1 88368744 71 + 114275543 I e dasNov3.JH569502 2682831 0 - 6579706 C a score=135106.000000 s hg38.chr3_KI270934v1_alt 35865 21 + 163458 ggctgggcgcggtg--gctcatg s panTro5.chr3 2502519 21 - 202621043 ggccgggcgcggtg--gctcacg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97128 21 - 190779 ggccgggcgcggtg--gctcacg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 19812 21 + 55620 ggccgggcgcggtg--gctcacg i gorGor5.CYUI01001831v1 C 0 N 0 s nomLeu3.chr11 2814374 21 - 123690457 ggccgggcgcggtg--gctcacg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320512 21 - 204787373 ggctgggcgtggtg--gctcagg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386264 21 - 192460366 ggctgggcgtggtg--gctcagg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125318 20 - 19675229 ggctgggcgcgat---gctcagg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358906 21 - 16847902 ggctgagcgcggtg--gctcagg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331525 21 + 91754291 ggctgggcgcggtg--gctcatg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396333 21 + 1977891 ggctgggcgcggtg--gctcatg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337637 21 - 7796314 ggccaggcgcggtg--gctcacg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810335 21 + 74750902 ggctgggcacagtg--gctcaca i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260333 23 - 17725628 ggctgggcgtggtacctctcaga i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348255 21 + 6778120 ggccaggtgccgtg--gctcatg i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 2304980 2 - 31377067 -----AG---------------- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14779017 11 - 22200726 I e mm10.chr16 32771829 1951 + 98207768 I e micMur3.chr1 88368744 71 + 114275543 I e dasNov3.JH569502 2682831 0 - 6579706 C e otoGar3.GL873829 189131 0 + 608964 C a score=117996.000000 s hg38.chr3_KI270934v1_alt 35886 14 + 163458 cctgtcat----cccagc s panTro5.chr3 2502540 14 - 202621043 cctgtcat----cccagc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97149 14 - 190779 cctgtcat----cccagc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 48452 13 - 106623 cctgtcat-----ccagc i gorGor5.CYUI01000576v1 N 0 C 0 s nomLeu3.chr11 2814395 14 - 123690457 cctgtcat----ctcaga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320533 14 - 204787373 cctgtcat----cccagc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386285 14 - 192460366 cctgtcat----cccagc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125338 14 - 19675229 cctgtcat----cccagc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358927 14 - 16847902 cctgtcat----cccagc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331546 14 + 91754291 cctgtcat----cccagc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396354 14 + 1977891 cctgtcat----cccagc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337658 14 - 7796314 cctgtcat----cccagc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810356 18 + 74750902 cctgtcctcacacctagc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260356 14 - 17725628 cctgtcat----cccagc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348276 14 + 6778120 cctgcaat----ccccgc i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 2304982 11 - 31377067 ---GTCAT----TCCACC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14779017 11 - 22200726 I e mm10.chr16 32771829 1951 + 98207768 I e micMur3.chr1 88368744 71 + 114275543 I e dasNov3.JH569502 2682831 0 - 6579706 C e otoGar3.GL873829 189131 0 + 608964 C a score=826473.000000 s hg38.chr3_KI270934v1_alt 35900 111 + 163458 gctttgggaggccgaggtgggcggatcatctgaggtcaggagttcgagaccagtctggccaacatggtgaaaccccgtctgtactaaaaatacaaaaaaaaaaaaaaaa---gc s panTro5.chr3 2502554 114 - 202621043 gctttgggaggccgaggtgggcggatcatctgaggtcaggagttcgacaccagtctggccaacatggtgaaaccctgtctctactaaaaatacaaaaaaaaaaaaaaaaaaagc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97163 105 - 190779 gctttgggaggccgaggtgggcggatcatctgaggtcaggagttcgagaccagtctggccaacatggtgaaaccctgtctctactaaaaatacaaaaaaaaaa---------ac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 48465 107 - 106623 gctttgggaggccgaggtgggtggatcatctgaggtcaggagttcgagaccagtctggccaacatggtgaaaccccatctctactaaaaatacaaaaaaaaaaaa-------gc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2814409 104 - 123690457 gctttgagaggccgaggcgggcggatcatctgaggtcaggagttcgagaccagtctggccaacatggtgaaaccccgtctctactaaaaatacaaaaaaata----------gc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320547 104 - 204787373 actttgggaggccgacgcgggtggatcatctgaggtcaggagtttaagaccagcctggccaacacggtgaaaccccatctctactaaaaaaacaaaaaaata----------gc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386299 104 - 192460366 actttgggaggccgacgcgggtggatcatctgaggtcaggagtttaagaccagcctggccaacacggtgaaaccccatctctactaaaaaaacaaaaaaata----------gc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125352 102 - 19675229 actttgggaggccgacgcgggtggatcatctgaggtcaggagtttaagaccagcctggccaacacggtgaaaccccatctctactaaaaaa--caaaaaata----------gc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16358941 104 - 16847902 actttgggaggccgacgcgggtggatcatctgaggtcaggagtttaagaccagcctggccaacatggtgaaaccccatctctactaaaaaaacaaaaaaata----------gc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331560 104 + 91754291 actttgggaggccgacgcaggtggatcatctgaggtcaggagtttaagaccagcctggccaacacagtgaaaccccatctctactaaaaaaacaaaaaaata----------gc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396368 104 + 1977891 actttgggaggccgacgcgggtggatcatctgaggtcaggagtttaagaccagcctggccaacacggtgaaaccccatctctactaaaaaaacaaaaaaata----------gc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337672 104 - 7796314 actttgggaggccgaggcgggtggatcatctgaggtcaggagtttaagaccagcctggccaacacggtgaaaccccatctctactaaaaaaacaaaaaaata----------gc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810374 103 + 74750902 actttgggaggccacggtgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaagcccttctgtactaaaaatat-aaaagata----------gc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260370 103 - 17725628 actttgggaggccaaggtgggcagatcacctgaggtcaggagtcccagaccagcctggccaacatagtgaaatcccttctgtactaaaaatat-aaaagata----------gc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348290 103 + 6778120 tctttgggaggctggggcaggtggatcacctgaggtcaggagtttgagaccagcctggacgacatggtgaaaccccttctgtactaaaaatat-aaaagata----------gc i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 14779017 11 - 22200726 I e mm10.chr16 32771829 1951 + 98207768 I e micMur3.chr1 88368744 71 + 114275543 I e dasNov3.JH569502 2682831 0 - 6579706 C e canFam3.chr33 2304993 0 - 31377067 C e otoGar3.GL873829 189131 0 + 608964 C a score=282940.000000 s hg38.chr3_KI270934v1_alt 36011 34 + 163458 caggcatggtggtgcatgcctgtaatcccagcta s panTro5.chr3 2502668 34 - 202621043 caggcatggtggtgcatgcctgtaatcccagcta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97268 34 - 190779 caggcatggtggtgcatgcctgtaatcccagcta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 48572 34 - 106623 caggcatggtggtgcatgcctggaatcccagcta i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2814513 34 - 123690457 cgggcgtggtggtgcatgcctgtaatcccagctc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320651 34 - 204787373 caggcatggtggcgggtgcctgtaatcccagctc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386403 34 - 192460366 caggcatggtggcgggtgcctgtaatcccagctc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125454 34 - 19675229 caggcatggtggcgggtgcctgtaatcccagctc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359045 34 - 16847902 caggcatggtggcgggtgcctgtaatcccagctc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331664 34 + 91754291 caggcatggtggcgggtgcctgtagtcccagttc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396472 34 + 1977891 caggcatggtggcgggtgcctgtaatcccagctc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337776 34 - 7796314 caggcatggtggcgggtgcctgtaatcccagctc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810477 34 + 74750902 caggcgtagtggcaggcgcctgtaatcccagtta i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260473 34 - 17725628 caggcatggtggcaggcacctgtaatcccagcta i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348393 34 + 6778120 caggcgtggtggtaggcgcctgtaatcccagcta i cebCap1.NW_016107444v1 C 0 C 0 s dasNov3.JH569502 2682831 16 - 6579706 CAGGCATGG------------------ACAACTA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14779017 11 - 22200726 I e mm10.chr16 32771829 1951 + 98207768 I e micMur3.chr1 88368744 71 + 114275543 I e canFam3.chr33 2304993 0 - 31377067 C e otoGar3.GL873829 189131 0 + 608964 C a score=241301.000000 s hg38.chr3_KI270934v1_alt 36045 29 + 163458 ctcaggagactgaggcaggagaatcgctt s panTro5.chr3 2502702 29 - 202621043 ctcaggagagtgaggcaggagaatcgctt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97302 29 - 190779 ctcaggagagtgaggcaggagaatcgctt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 48606 29 - 106623 ctcaggagactgaggcaggagaatcgctt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2814547 29 - 123690457 ttcaggagactgaggcaggagaatcgctt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320685 29 - 204787373 ttcgggagactgaggcagaagaatcgctt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386437 29 - 192460366 ttcgggagactgaggcagaagaatcgctt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125488 29 - 19675229 ttcgggagactgaggcagaagaatcgctt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359079 29 - 16847902 ttcgggagactgaggcagaagaatcactt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331698 29 + 91754291 ttcgggagactgaggcagaagaatcgctt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396506 29 + 1977891 ttcgggagattgaggcagaagaatcgctt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337810 29 - 7796314 tttgggagactgaggcagaagaatcgctt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810511 29 + 74750902 cttgggaggctgaggcaagagaatcactt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260507 29 - 17725628 cctgggaggctgaggcaggagaatcactt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348427 29 + 6778120 cctgggaggctgaggcaggagaatcacct i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 14779017 11 - 22200726 I e mm10.chr16 32771829 1951 + 98207768 I e micMur3.chr1 88368744 71 + 114275543 I e dasNov3.JH569502 2682847 0 - 6579706 C e canFam3.chr33 2304993 0 - 31377067 C e otoGar3.GL873829 189131 0 + 608964 C a score=88072.000000 s hg38.chr3_KI270934v1_alt 36074 10 + 163458 gaacccagga s panTro5.chr3 2502731 10 - 202621043 gaacccagga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97331 10 - 190779 gaacccagga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 48635 10 - 106623 gaacccagga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2814576 10 - 123690457 gaacccagga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320714 10 - 204787373 gaacctagga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386466 10 - 192460366 gaacctagga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125517 10 - 19675229 gaacctagga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359108 10 - 16847902 gaacctagga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331727 10 + 91754291 gaacctagga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396535 10 + 1977891 gaacctagga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337839 10 - 7796314 gaacccagga i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810540 10 + 74750902 gagcccggga i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260536 10 - 17725628 gagcccacga i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348456 10 + 6778120 gagcccgcga i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 2304993 10 - 31377067 AAACCCAGTA i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14779017 11 - 22200726 I e mm10.chr16 32771829 1951 + 98207768 I e micMur3.chr1 88368744 71 + 114275543 I e dasNov3.JH569502 2682847 0 - 6579706 C e otoGar3.GL873829 189131 0 + 608964 C a score=192355.000000 s hg38.chr3_KI270934v1_alt 36084 21 + 163458 ggcagatgttgcagtgagctg s panTro5.chr3 2502741 21 - 202621043 ggcagatgttgcagtgagctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97341 21 - 190779 ggcagatgttgcagtgagctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 48645 21 - 106623 ggcagatgttgcagtgagctg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2814586 21 - 123690457 ggcagatgttgcagtgagctg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320724 21 - 204787373 ggcagatgttgcagtgaactg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386476 21 - 192460366 ggcagatgttgcagtgaactg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125527 20 - 19675229 -gcagatgttgcagtgaactg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359118 21 - 16847902 ggcagatgttgcagtgaactg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331737 21 + 91754291 ggcagatgttgcagtgaactg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396545 21 + 1977891 ggcagatgttgcagtgaactg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337849 21 - 7796314 ggcagatgttgcagtgagctg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810550 21 + 74750902 ggcagatgttgccgtgagccg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260546 21 - 17725628 ggcagatgttgcagtgagctg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348466 21 + 6778120 ggcagacgtggcagtgagccg i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 14779017 11 - 22200726 I e mm10.chr16 32771829 1951 + 98207768 I e micMur3.chr1 88368744 71 + 114275543 I e dasNov3.JH569502 2682847 0 - 6579706 C e canFam3.chr33 2305003 0 - 31377067 C e otoGar3.GL873829 189131 0 + 608964 C a score=363693.000000 s hg38.chr3_KI270934v1_alt 36105 58 + 163458 a-gatcgcgtcactgcactccagcctgg-tgacagagcgagactctgtctc-----aaaaaaaa------------------g s panTro5.chr3 2502762 71 - 202621043 a-gatcgcgtcactgcactccagcctgg-tgacagagcgagactctgtctc-----aaaaaaaa---aaa--aaaaaaaaaag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97362 67 - 190779 a-gatcgcgtcactgcactccagcctgg-tgacagagcgagactctgtctc-----aaaaaaaa---------aaaaaaaaag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 48666 74 - 106623 a-gatcgcgtcactgcactccagcctgg-tgacagagcgagactctgtctc-----aaaaaaaaaaaaaa--aaaaaaaaaaG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2814607 64 - 123690457 a-gatcgcgtcactgtactccagcctgg-tgacagagcaagactctgtctc-----aaaaaaaa------------aaaaaag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320745 71 - 204787373 a-gatcgcgtcactgcactccagcctgggcaatagagcgagactccatctc-----aaaaaaaa---aaa---aacaaaaCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386497 74 - 192460366 a-gatcgcgtcactgcactccagcctgggcaatagagcaagactccatctc-----aaaaaaaa---aaacaaaacaaaaCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125547 67 - 19675229 aggatcgcgtcatctcactccagcctgg--catagagcgagactccatctc-----aaaaaaaa---aaa------aaaaCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359139 72 - 16847902 a-gatcgcgtcactgcactccagcgtgggcaatagagcgagactccatctc-----aaaacaac---aaa--aaaaaaaaCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331758 79 + 91754291 a-gatcgcatcactgcactccagcctgggcaatagagcgagactccatctcgaaaaaaagaaaa---agaaaaaaaaaaaCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396566 74 + 1977891 a-gatcgcgtcactgcactccagcgtgggcaatagagcgagactccatctc-----aaaacaac---aacaacaaaaaaaCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337870 69 - 7796314 a-gatcgcgtcactgcactccagcctgggcaatagagcgagactccatctc-----aaaaaaaa---aaa-----aaaaaCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810571 65 + 74750902 a-gatcgagtcactgtactccagcctgagcaacagagcaagattctgtctc-----aat-aaaa---agg--------aaCTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260567 66 - 17725628 a-gatcgagtcactgtactccaacctgagcaacagagcaagactccacctc-----aacaaaaa---agg--------aaCTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348487 66 + 6778120 a-aatcgaatcactgcactccagcctgagcaacagagcaagactccacctc-----aacaaaaa---agg--------aaCTG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 189131 10 + 608964 A-GATCGCTTC------------------------------------------------------------------------ i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14779017 11 - 22200726 I e mm10.chr16 32771829 1951 + 98207768 I e micMur3.chr1 88368744 71 + 114275543 I e dasNov3.JH569502 2682847 0 - 6579706 C e canFam3.chr33 2305003 0 - 31377067 C a score=33435.000000 s hg38.chr3_KI270934v1_alt 36163 5 + 163458 aTTTG s panTro5.chr3 2502833 5 - 202621043 aTTCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97429 5 - 190779 aTTCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 48740 5 - 106623 ATTAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2814671 5 - 123690457 aTGCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320816 5 - 204787373 ACTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386571 5 - 192460366 ACTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125614 5 - 19675229 ACTCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359211 5 - 16847902 ACTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331837 5 + 91754291 ACTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396640 5 + 1977891 ACTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337939 5 - 7796314 ACTCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810636 5 + 74750902 ATTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260633 5 - 17725628 ATTCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348553 5 + 6778120 ATTCA i cebCap1.NW_016107444v1 C 0 C 0 s dasNov3.JH569502 2682847 5 - 6579706 ATTCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14779017 11 - 22200726 I e mm10.chr16 32771829 1951 + 98207768 I e micMur3.chr1 88368744 71 + 114275543 I e canFam3.chr33 2305003 0 - 31377067 C e otoGar3.GL873829 189141 0 + 608964 C a score=282565.000000 s hg38.chr3_KI270934v1_alt 36168 27 + 163458 AAGATCATTTAATCTCAATCTGATCAT s panTro5.chr3 2502838 27 - 202621043 AAGATCATTTAATCTCAATCTGATCAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97434 27 - 190779 AAGATCATTTAATCTCAATCTGATCAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 48745 27 - 106623 AAGATCATTTAATCTCAATCTGATCAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2814676 27 - 123690457 AAGATCATTTAATCTCAATCTGATCAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320821 27 - 204787373 AAGATCATTTAATCTCAATCTGATCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386576 27 - 192460366 AAGATCATTTAATCTCAATCTGATCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125619 25 - 19675229 AAGA-CATTTAATCTCAATC-GATCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359216 27 - 16847902 AAGATCATTTAATCTCAATCTGATCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331842 27 + 91754291 AAGATCATTTAATCTCAATCTGATCAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396645 27 + 1977891 AAGATCATTTAATCTCAATCTGATCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337944 27 - 7796314 AAGATCATTTAATCTCAATCTGTTCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810641 27 + 74750902 GAGATTATTTAATCTCAATCTGATCAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260638 27 - 17725628 AAGATTGTCTCATCTCAATCTGATCAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348558 27 + 6778120 AAGATTATTTAATCTCAATCTGATCAT i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14779028 27 - 22200726 AAGATCACTTAATCTCAATCTAATAAT i proCoq1.NW_012133858v1 I 11 C 0 s otoGar3.GL873829 189141 16 + 608964 -----------ATCTCAGTCTAATAAT i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2682852 24 - 6579706 AAGAGCAGTCCATCTCAATATAAT--- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32771829 1951 + 98207768 I e micMur3.chr1 88368744 71 + 114275543 I e canFam3.chr33 2305003 0 - 31377067 C a score=220647.000000 s hg38.chr3_KI270934v1_alt 36195 27 + 163458 ATATAGTCATCTTTAGTCA---TTATGCAT s panTro5.chr3 2502865 24 - 202621043 ATATAGTCATCATCAGTCA---T---GCAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97461 24 - 190779 ATATAGTCATCATCAGTCA---T---GCAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 48772 27 - 106623 ATATAATCATCTTTAGTCA---TTATGCAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2814703 27 - 123690457 ATACAGTCATCTTTAGCCA---TTATGCAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320848 27 - 204787373 ACGCAGTCATCTTTAATCA---TTATGCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386603 27 - 192460366 ACGCAGTCATCTTTAATCA---TTATGCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125644 25 - 19675229 A-GCAGTCATCTTTAAT-A---TTATGCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359243 27 - 16847902 ACGCAGTCATCTTTAATCA---TTATGCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331869 27 + 91754291 ATGCAGTCATCTTTAATCA---TTATGTAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396672 27 + 1977891 ACGCAGTCATCTTTAATCA---TTATGCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337971 27 - 7796314 ACACAGTCATCTTTAATCA---TTACGCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810668 30 + 74750902 ATGCAGTCATCTTTAATTATCCTTATGCAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260665 27 - 17725628 ATGCAGTCGTCTTTAATTA---CTATGCAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348585 30 + 6778120 ATGCAGCCGTCTTTAATTATCATTATGCAT i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14779055 30 - 22200726 ATGCTATCATCTTTAATCATCATTATGCAG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 189157 30 + 608964 ATGCAATCATCTTTAATCATCATTATGCAT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2305003 30 - 31377067 ACACGATCATCTTTAACCAGCTTGATGCGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2682876 18 - 6579706 ----AGTAAGCTTT--------TTATTCAA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32771829 1951 + 98207768 I e micMur3.chr1 88368744 71 + 114275543 I a score=180337.000000 s hg38.chr3_KI270934v1_alt 36222 13 + 163458 TCAC-CAAATTATT s panTro5.chr3 2502889 13 - 202621043 TCAC-CAAATTATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97485 13 - 190779 TCAC-CAAATTATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 48799 13 - 106623 TCAC-CAAATTATT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2814730 13 - 123690457 TCAC-CAAATTATT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320875 13 - 204787373 TCAC-CAAAGTATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386630 13 - 192460366 TCAC-CAAAGTATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125669 14 - 19675229 TCACTCAAAGTATT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359270 13 - 16847902 TCAC-CAAAGTATT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331896 13 + 91754291 TCAC-CAAAGTATT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396699 13 + 1977891 TCAC-CAAAGTATT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7337998 13 - 7796314 TCAC-CAAATTATT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810698 13 + 74750902 TCAC-CAAATTATT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260692 13 - 17725628 TCAC-CAAATTATT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348615 13 + 6778120 TCAC-CAAATTATT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88368815 13 + 114275543 TCAC-CAAAATATT i micMur3.chr1 I 71 C 0 s proCoq1.NW_012133858v1 14779085 13 - 22200726 TCAC-CAAACTATT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 189187 13 + 608964 TCAT-CAAATCATT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2305033 13 - 31377067 TCAC-CGAATTACT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2682894 13 - 6579706 TCAC-TTGATTGTT i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32771829 1951 + 98207768 I a score=1546495.000000 s hg38.chr3_KI270934v1_alt 36235 121 + 163458 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACATTTTTATATCTATTAAAGGAAGGCTCTAATGTAGGACAAGATTTAAAGAAATATGAAAAATACTTTCGTTTGGTACCTT s panTro5.chr3 2502902 121 - 202621043 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACATTTTTATATCTATTAAAGGAAGGTTCTAGTGTAGGACAAGATTTAAAGAAATATGAAAAATACTTTCGTTTGGTGCCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97498 121 - 190779 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACATTTTTATATCTATTAAAGGAAGGCTCTAATGTAGGACAAGATTTAAAGAAATATGAAAAATACTTTCGTTTGGTGCCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 48812 121 - 106623 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACATTTTTATATCTATTAAAGGAAGGCTCTGATGTAGGACAAGATTTAAAGAAATAGGAAAAATACTTTCGTTTGTTACCTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2814743 121 - 123690457 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACATTTTTATATCTATTAAAGGAAGGATGTAATGTAGGACAAGATTTAAAGGAATATAAAAAATACTTTTGTTTGGTACCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2320888 121 - 204787373 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACATTTTTATATCTATTAAAGGAAGGATCTAATGTAGGACAAGACTTAAAGAAATATAAAAAATACTTTCATTTGGTACCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386643 121 - 192460366 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACATTTTTATATCTATTAAAGGAAGGATCTAATGTAGGACAAGACTTAAAGAAATATAAAAAATACTTTCATTTGGTACCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125683 121 - 19675229 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACATTTTTATATCTATTAAAGGAAGGATCTAATGTAGGACAAGACTTAAAGAAATATAAAAAATACTTTCATTTGGTACCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359283 121 - 16847902 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACACTTTTATATCTATTAAAGGAAGGATCTAATGTAGGACAACACTTCAAGAAATATAAACAATACTTTCATTTGGTACCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91331909 121 + 91754291 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACATTTTTATATCTATTAAAGGAAGGATCTAATGTAGGACAAGACTTAAAGAAATATAAAAAATACTTTCATTTGGTACCTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396712 121 + 1977891 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACATTTTTATATCTATTAAAGGAAGGATCTAATGTAGGACAAGACTTAAAGAAATATAAAAAATACTTTCATTTGGTACCTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7338011 121 - 7796314 AGAATGATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACATTTTTATATCTATTAAAGGAAGGATCTAATGTAGGACAAGATTTAAAGACATATAAAAAATACTTTCATTTGGTACCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810711 117 + 74750902 AGAA-AATCAAGTGCAACAGTTTAA-AATTACCAG-TTACAACATTTTTATATCTATTAAAGGAAGGATCTAATGTAGG--AAAATTTAAAGAAATAT-AAAAATACTTTTGTTTACTACCTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260705 120 - 17725628 AGAA-AATCAAGTGCAACAGTTTAA-AAGTACCAA-TTACAACATTTTTATACCTATTAAAGGAAGCATCTAATATAGGACAAAATTTAAAGAAATATAAAAAATACTTTTGTTTACTACCTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348628 120 + 6778120 AGAA-AATCAAGTGCAACAGTTTAA-AATTACCAA-TCACAACATTTTTGTATCTATCAAAGGAAGCATCTAATGCAGGACAAAATTTAAACTAATATAAAAAATACTTTTGTTCACTGCCTT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88368828 119 + 114275543 AGAATAATCAAGTAAAACAATTTAA-AAATACTAATTTATAACATTTTTATGTCTATTAAAAGAAAGATATAATGTGGGACAAGATTTAAAGAAATAC---AAATACCTTCATTTGGTACCTT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14779098 119 - 22200726 AGAATAATCAAGTAAAACAATTTAA-AAATACTAATTTACAACATTTTTATGTCTATTAAAAGAAGGATATAATGTGGGACAAGATTTAAAGAAATAC---AAATACCTTCATTTGGTACCTT i proCoq1.NW_012133858v1 C 0 I 221 s otoGar3.GL873829 189200 119 + 608964 AGAATAATCAAGTACAACCATTTAA-AAATGTCAGTTTACAACATTTTTATATGTATGAAAAGAAGAATAGCATGTGGAACAGGATTTAAAGAAATAC---AAATAGTTTCATTTGGTACCTT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32773780 112 + 98207768 AAGATAAATAAATGTGATA----AA-ACCAATGAGTTTAAAGCATTATCATATCTATTAAATGAATAACACACTGTGGAATGAGATCAAAACATAT-----AAATAGCTTCACT-GGTACTTT i mm10.chr16 I 1951 C 0 s canFam3.chr33 2305046 115 - 31377067 ---AGAATAGAGTGTAACAATTTAACAAATACTGATCTAAAGCATTTTCAAATCTATTAAAAGAAGGCTATCACGTGGAACAGGATTTAAAGGTAT-----AAATAGCTTCATTCGGCGTGGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2682907 116 - 6579706 AGAATAATCAAGTACTGTAATGAAC-AAATGCTAATTTTAAATATTTCTATATGTGTTAA---AAGGATTTAATGAGAAACAAGATTTAAAGAAATAC---AAATGCCTTTGTTTGATACCTT i dasNov3.JH569502 C 0 C 0 a score=167356.000000 s hg38.chr3_KI270934v1_alt 36356 15 + 163458 TCTTGCTCTTTT--TGT s panTro5.chr3 2503023 15 - 202621043 TCTTGCTCTTTT--TGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97619 15 - 190779 TCTTGCTCTTTT--TGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 48933 15 - 106623 TCTTGCTCTTTT--TGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2814864 15 - 123690457 TCTCGCTCTTTT--TGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2321009 17 - 204787373 TCTTGCTCTTTTTATGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386764 17 - 192460366 TCTTGCTCTTTTTATGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125804 17 - 19675229 TCTTGCTCTTTTTATGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359404 17 - 16847902 TCTTGCTCTTTTTATGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91332030 17 + 91754291 TCTTGCTCTTTTTATGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396833 17 + 1977891 TCTTGCTCTTTTTATGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7338132 17 - 7796314 TCTTGCTCTTTTTGTGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810828 17 + 74750902 TCTTGCTCTTTTTGTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260825 17 - 17725628 TCTTGCTCTTTTTATGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348748 17 + 6778120 TCTTGCTCTTTTTATGT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88368947 15 + 114275543 TCTCACTATTTTTGT-- i micMur3.chr1 C 0 I 206 s otoGar3.GL873829 189319 15 + 608964 TCTCACTGTTTTCAT-- i otoGar3.GL873829 C 0 I 2 s mm10.chr16 32773892 15 + 98207768 --TCGTTGTTTTTATGG i mm10.chr16 C 0 C 0 s canFam3.chr33 2305161 17 - 31377067 TCTCATTATTTTTATGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2683023 17 - 6579706 TCTCACTGTTTTGATGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14779217 221 - 22200726 I a score=1427941.000000 s hg38.chr3_KI270934v1_alt 36371 167 + 163458 CTGGCAACCA----TGTTTACC--TAGCCGTGTCTCTCCTTGTCTGGTTTCCTGGGCTAGGACCCAGTAGAGTGCCATCGCTCCC-TCTCCGTAAAGGTGTTAGAGACCCCGAGCCC-------TACATCCATGATCAGGGCCAAAGGC--TCCAAGCACAAGGGACGCTGCTTTCGTCTGTT s panTro5.chr3 2503038 167 - 202621043 CTGGTAACCA----TGTTTACC--TAGCCGTGTCTCTCCTTGTCTGGTTTCCTGGGCTAGGACCCAGTAAAGTGCCATCGCTCCC-TCTCCGTAAAGGTGTTAGAGACCCCGAGCCC-------TACATCCATGATCAGGGCCAAAGGG--TCCAAGCACAAGGGATGCTGCTTTCGTCTGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97634 167 - 190779 CTGGTAACCA----TGTTTACC--TAGCCGTGTCTCTCCTTGTCTGGTTTCCTGGGCTAGGACCCAGTAAAGTGCCATCGCTCCC-TCTCCGTAAAGGTGTTAGAGACCCCGAGCCT-------TACATCCATGATCAGGGCCAAAGGG--TCCAAGCACAAGGGATGCTGCTTTCGTCTGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 48948 167 - 106623 CTGGTAACCA----TGTTTACC--TAGCCGTGTCTCTCCTTGTCTGGTTTCCCGGGCTAGGACCCAGTAAAGTGCCATCGCTCCC-TCTCCATAAAGGTGTTAGAGACCCCGAGCCC-------TACATCCATGATCAGGGCCAAAGGG--TCCAAGCACAAGTGATGCTGCTTTCGTCTGTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2814879 167 - 123690457 CTGGTAACCA----TGTTTACCTATAGCCATGTCTCTCCTTGCCTGGTTTCCTGGGCTAGGACCCAGTAAAGTGCCATCGCTCCC-TCTCCGTAAAGGTGTTAGAGACCCCGAGCCC-------TACATCCATGATCAGGGCGAAAGGG--TCCAAGCACAAGGGATGCCACTTTCGTCCA-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2321026 157 - 204787373 CTGGTAACCG----TGTTTACC--TAGCTGTGTCTCTCCTTGTCTGATTTCCTGGGCTAGGACCCAGTAACGTACCATCGTTTCC-TCTCCATAAAGGTGTTAGAGACCCTGAGCCC-------TGCATCCACGATCAGGGCCAAAGGG--TCCCAGCACAAGGGATGCCGCT---------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386781 157 - 192460366 CTGGTAACCG----TGTTTACC--TAGCTGTGTCTCTCCTTGTCTGATTTCCTGGGCTAGGACCCAGTAACGTACCATCGTTTCC-TCTCCATAAAGGTGTTAGAGACCCTGAGCCC-------TGCATCCACGATCAGGGCCAAAGGG--TCTCAGCACAAGGGATGCCGCT---------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125821 157 - 19675229 CTGGTAACCG----TGTTTACC--TAGCTGTGTCTCTCCTTGTCTGATTTCCTGGGCTAGGACCCAGTAACGTACCATCGTTTCC-TCTCCATAAAGGTGTTAGAGACCTTGAGCCC-------TGCATCCACGATCAGGGCCAAAGGG--TCCCAGCACAAGGGATGCCGCT---------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359421 157 - 16847902 CTGGTAACCG----TGTTTACC--TAGCTGTGTCTCTCCTTGTCTGATTTCCTGGGCTAGGACCCAGTAACGTACCATCGTTTCC-TCTCCATAAAGGTGTTAGAGACCCTGAGCCC-------TGCATCCATGATCAGGGCCAAAGGG--TCCCAGCACAAGGGATGCCGCT---------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91332047 153 + 91754291 CTGGTAACCG----TGTTTACC--TAGCTGTGTCTCTCCTTGCCTGATTTCCTGGACTAGGACCCAGTAACGTACCATCGCTTCC-TCTCCATAAAGGTGTGAGAGACCCTGAGCCC-----------TCCACGATCAGGGCCAAAGGA--TCCCAGCACAAGGGATGCCGCT---------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1396850 157 + 1977891 CTGGTAATCG----TGTTTACC--TAGCTGTGTCTCTCCTTGTCTGATTTCCTGGGCTAGGACCCAGTAACGTACCATCGCTTCC-TCTCCATAAAGGTGTTAGAGACCCTGAGCCC-------TGCATCCACGATCACGGCCAAAGGG--TCCCAGCACAAGGGATGCCGCT---------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7338149 164 - 7796314 CTGGTAACCG----TGTTTACC--TAACTGTGTCTCTCCTTGTCTGGTTTCCTGGGGTAGGACCCAGTAAAGTACCATCGCTCGC-TCCCCATAAAGGTGTTCGAGACCCTGAGCCCTGAGTCCTGCATCCACGATCAGGGCCAAGGGG--TCCCAGCACAAGCGATGCCGCT---------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73810845 158 + 74750902 GTGGTAACCA----TGTTAACC--TAGCTGTGTCTCTCCTCGTCTGGTTTCCTGGA-TAGGACCCAGTAAGGCGTCACGGGTCCC-TCTCTGTAAAGGTGTTAGAGACTCCAAGACC-------TGCATCCATGATCAGGGCCAAAGGGTCTCAAAGAATAGGGGATGCCGCT---------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260842 155 - 17725628 GTGGTAACCA----TGTTTACG--CAGCTGTG--TCTCCTCGTCTGGTTTCCTGGACTAGGGCCCGGTAAGGCGTCGTGGGTCCC-TCTCTGTAAAGGTGTGAGAGACTCCGAGGCC-------TGCATCCATGATCAGGGCCAAAGGG--TCAAAGCACAGGGGACGCCGCT---------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348765 157 + 6778120 GTGGTAACCA----CGTTTACC--CAGCTGTGTCTCTCCTCTTCTGGTTTCCTGGACCAGGACCCAGTAAGGCGTCATGGGTCCC-TCTCTGTAAAGGTGTTAGGGACTCCGAGGCC-------TGCATCCGTGATCGGGGCCAAAGGG--TCAAAGCACAGGGGACGCCGCT---------- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 189336 142 + 608964 TCGTTAACCACGCCTGTTAATC--TAGCTTTGT-TACCCTTGTCTGATTTTCTGTGCT----------------TCATCTTTCCC-TCCTGGCAATGTTGTT--AGACCCCCAGGCC-------TGCATCCTTGGTCTAGATCAGAGGG--TCAGAGCACAAGGGATGCAGCC---------- i otoGar3.GL873829 I 2 C 0 s mm10.chr16 32773907 128 + 98207768 CCATTAGCTA----TGCTTATC--TGGTTTTCTGTCTCCTTGTCTGATTTTCTGGATTGGGACTAA------CACAATTCTTCCCTTCTTAGTAATGGGATCTGAGAACCTGGG-CT-------GGCAGCT-------GGATTGAAGGG--CCAAAG-------------------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2305178 165 - 31377067 CGGTCAACCA----CGATTGCC--CAACTCTGTCTCTCCCTGT-TGCTCTTCTGTACTGGGACCAAGCAAAGCCTCATTTCTGCC-TGTCAGTACTGGTGT-GGAGACCCCTCGTCC-------TAAAACCGTGACCTGGGTGGAAAAG--TCAAAGCCCACAGGATGCAACTTCCCTTCTTT i canFam3.chr33 C 0 I 192 s dasNov3.JH569502 2683040 124 - 6579706 TTGTTAACCA----TGCATCCC--TAGCTCTGTCTTTCCTCATCTGATTTTCTGTCCTGGGACCAAGCAAA-CATTGTCTCTCCC-TCTTGGTGATGGTTTGAGAG-CTCCCAGGCC-------TGTACCTGTGATATGG------------------------------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14779217 221 - 22200726 I e micMur3.chr1 88368962 206 + 114275543 I a score=26860.000000 s hg38.chr3_KI270934v1_alt 36538 43 + 163458 GCCAGCACTAATTCAAAGGGTCCAAGGGCATCAAAGGGATGCC s panTro5.chr3 2503205 43 - 202621043 GCCAGCACTAATTCAAAGGGTCCAAGGGCATCAAAGGGATGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97801 43 - 190779 GCCAGCACTAATTCAAAGGGTCCAAGGGCATCAAAGGGATGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49115 43 - 106623 GCCAGCACTAATTCAAAGGGTCCAAGGGCATCAAAGGGATGCC i gorGor5.CYUI01000576v1 C 0 C 0 s dasNov3.JH569502 2683164 27 - 6579706 ------------TCAAAGAGTCGAA----ACCTGAGAGATGCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14779217 221 - 22200726 I e mm10.chr16 32774035 0 + 98207768 C e micMur3.chr1 88368962 206 + 114275543 I e macNem1.NW_012014355v1 19125978 0 - 19675229 C e saiBol1.JH378146 17260997 0 - 17725628 C e calJac3.chr17 73811003 0 + 74750902 C e cebCap1.NW_016107444v1 6348922 0 + 6778120 C e canFam3.chr33 2305343 192 - 31377067 I e otoGar3.GL873829 189478 0 + 608964 C e colAng1.NW_012118932v1 7338313 0 - 7796314 C e manLeu1.NW_012102020v1 1397007 0 + 1977891 C e chlSab2.chr15 91332200 0 + 91754291 C e cerAty1.NW_012004056v1 16359578 0 - 16847902 C e macFas5.chr2 192386938 0 - 192460366 C e rheMac8.chr2 2321183 0 - 204787373 C e nomLeu3.chr11 2815046 0 - 123690457 C a score=208532.000000 s hg38.chr3_KI270934v1_alt 36581 32 + 163458 ACTTTCTGTCTGTTGCCAGCACTAATTCTGAG s panTro5.chr3 2503248 32 - 202621043 ACTTTCTGTCTGTTGCCAGCACTAATTCTGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97844 32 - 190779 ACTTTCTGTCTGTTGCCAGCACTAATTCTGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49158 32 - 106623 ACTTTCTGTCTCTTGCCAGCACTAATTCTGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2815046 20 - 123690457 ------------TTGCCAGCACTAATTCTGCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2321183 25 - 204787373 -------GCCTGTTGCCAGCACTAATTCTGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386938 25 - 192460366 -------GCCTGTTGCCAGCACTAATTCTGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19125978 25 - 19675229 -------GCCTGTTGCCAGCACTAATTCTGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359578 25 - 16847902 -------GCCTGTTGCCAGCACTAATTCTGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91332200 25 + 91754291 -------GCCTGTTGCCAGCACTAATTCTGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1397007 25 + 1977891 -------GCCTGTTGCCAGCACTAATTCTGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7338313 25 - 7796314 -------GTCTGTTGCCAGCACTAATTCTGCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73811003 28 + 74750902 ---CTCTGTCTGTTGCCAGCACTAATTCTGC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17260997 28 - 17725628 ---GTCTGTCTGTTGCCAGCACTAATTCTGC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348922 28 + 6778120 ---GTCTGTCTGTTACCAACACTAATTCTGC- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 189478 29 + 608964 ---TTCCATGTGTTGCCAGCACTAACTATGCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32774035 12 + 98207768 ------------TTGGAAGGGATG-------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2305535 32 - 31377067 ACTTCCCTTCAGTTGCCAGCACCACTTATGCT i canFam3.chr33 I 192 C 0 s dasNov3.JH569502 2683191 32 - 6579706 GCTTTCCTTCTGTTGTCAGCACTAGTGGTGCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14779217 221 - 22200726 I e micMur3.chr1 88368962 206 + 114275543 I a score=408874.000000 s hg38.chr3_KI270934v1_alt 36613 26 + 163458 GGTGACTGTTCTTGGCTAAACCAAAG s panTro5.chr3 2503280 26 - 202621043 GGTGACTGTTCTTGGCTAAACCAAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97876 26 - 190779 GGTGACTGTTCTTGGCTAAACCAAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49190 26 - 106623 GGTGACTGTTCTTGGCTAAACCAAAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2815066 26 - 123690457 GGTGACTGTTCTTGGCTAAACCAAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2321208 26 - 204787373 GGTGACTGTTCTTGGCTAAACCAAAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386963 26 - 192460366 GGTGACTGTTCTTGGCTAAACCAAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19126003 26 - 19675229 GGTGACTGTTCTTGGCTAAACCAAAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359603 26 - 16847902 GGTGACTGTTCTTGGCTAAACCAAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91332225 26 + 91754291 GGTGACTGTTCTTGGCTAAACCAAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1397032 26 + 1977891 GGTGACTGTTCTTAGCTAAACCAAAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7338338 26 - 7796314 GGTGACTGTTCTTGGCTAAACCAAAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73811031 26 + 74750902 GGTGGCTGTTCTTGGCTAAACCAAAG i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 17261025 26 - 17725628 GGGGGCTGTTCTTGGCCAAACCAAAG i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 6348950 26 + 6778120 GGTGGCTGTTCTTGGCTAAACCAAAG i cebCap1.NW_016107444v1 C 0 I 1 s micMur3.chr1 88369168 26 + 114275543 GGTGACTGTTCTTTGCTAAACCAAAG i micMur3.chr1 I 206 I 177 s proCoq1.NW_012133858v1 14779438 26 - 22200726 GGTGACTGTTCTTTGCTAAACCAAAG i proCoq1.NW_012133858v1 I 221 I 1 s otoGar3.GL873829 189507 26 + 608964 GGTGATCGTTCTTTGCTAAAGTAAAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32774047 24 + 98207768 -GTGACT-TTCTTTGCTAAACCAGAA i mm10.chr16 C 0 I 1 s canFam3.chr33 2305567 26 - 31377067 AAAGACTATTCTTTGCTAAACTAAAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2683223 24 - 6579706 GGCAACTCCTCT--GCAAAACCAAGT i dasNov3.JH569502 C 0 C 0 a score=31305.000000 s hg38.chr3_KI270934v1_alt 36639 4 + 163458 CCCC s panTro5.chr3 2503306 4 - 202621043 CCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97902 4 - 190779 CCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49216 4 - 106623 CCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2815092 4 - 123690457 CCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2321234 4 - 204787373 CCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386989 4 - 192460366 CCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19126029 4 - 19675229 CCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359629 4 - 16847902 CCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91332251 4 + 91754291 CCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1397058 4 + 1977891 CCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7338364 4 - 7796314 CCCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73811058 4 + 74750902 CCCC i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17261052 4 - 17725628 CCCC i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 6348977 4 + 6778120 CCCC i cebCap1.NW_016107444v1 I 1 C 0 s proCoq1.NW_012133858v1 14779465 3 - 22200726 CCC- i proCoq1.NW_012133858v1 I 1 I 173 s otoGar3.GL873829 189533 3 + 608964 CCC- i otoGar3.GL873829 C 0 I 2 s mm10.chr16 32774072 3 + 98207768 CAT- i mm10.chr16 I 1 C 0 s canFam3.chr33 2305593 4 - 31377067 CCAT i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2683247 4 - 6579706 CCCT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88369194 177 + 114275543 I a score=81868.000000 s hg38.chr3_KI270934v1_alt 36643 10 + 163458 --GGGGGG-CATA s panTro5.chr3 2503310 11 - 202621043 --GGGGGGGCATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97906 11 - 190779 --GGGGGGGCATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49220 10 - 106623 --GGGGGG-CATA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2815096 10 - 123690457 --AGGGGG-CATA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2321238 10 - 204787373 --AGGGGG-CATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192386993 10 - 192460366 --AGGGGG-CATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19126033 10 - 19675229 --AGGGGG-CATA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359633 10 - 16847902 --AGGGGG-CATA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91332255 10 + 91754291 --AGGGGA-CATA i chlSab2.chr15 C 0 I 8 s manLeu1.NW_012102020v1 1397062 10 + 1977891 --AGGGGG-CATA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7338368 10 - 7796314 --AGGGGG-CATA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73811062 10 + 74750902 --AGGGAG-CGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17261056 10 - 17725628 --AGGGAG-CGTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348981 10 + 6778120 --AGGGAG-CGTG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 189538 10 + 608964 --AGGGAC-CATA i otoGar3.GL873829 I 2 C 0 s mm10.chr16 32774075 10 + 98207768 --CAGGGA-CCTG i mm10.chr16 C 0 I 1 s canFam3.chr33 2305598 10 - 31377067 --AGGGAC-CTTA i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2683251 12 - 6579706 TAAGTAAC-CTTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14779468 173 - 22200726 I e micMur3.chr1 88369194 177 + 114275543 I a score=57023.000000 s hg38.chr3_KI270934v1_alt 36653 10 + 163458 TTTTGCGTTC s panTro5.chr3 2503321 10 - 202621043 TTCTGCGTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97917 10 - 190779 TTCTGCGTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49230 10 - 106623 TTCTGCGTTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2815106 10 - 123690457 TTCTGCGTTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2321248 8 - 204787373 -TCTGCATT- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192387003 8 - 192460366 -TCTGCATT- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19126043 8 - 19675229 -TCTGCATT- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359643 8 - 16847902 -TCTGCATT- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1397072 8 + 1977891 -TCTGCATT- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7338378 8 - 7796314 -TCTGCATT- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73811072 10 + 74750902 TTCTGCGTTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17261066 10 - 17725628 TTCTGCATTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6348991 10 + 6778120 TTCTGCGTTC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 189548 10 + 608964 TTCTGAGCTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32774086 10 + 98207768 CTCTGGACTC i mm10.chr16 I 1 C 0 s canFam3.chr33 2305608 10 - 31377067 TTTTGAGCTC i canFam3.chr33 C 0 I 6 s dasNov3.JH569502 2683263 10 - 6579706 TTGTGAACTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14779468 173 - 22200726 I e micMur3.chr1 88369194 177 + 114275543 I e chlSab2.chr15 91332265 8 + 91754291 I a score=1483857.000000 s hg38.chr3_KI270934v1_alt 36663 185 + 163458 TCTTTGCCTC-----TCTGCCTGATGTTCTTTCTCTCTGTGTCTCAGAAGGGACTGCTTTGCCTGCATCCCTTTTGC--------------------------------------------C---------C------CATGT-GCGTCCTC--------CCAGGTGCGA----------------------------------------GACAATGGCACT-----------GAGAGGTTTTCTTCTCCA-CGGGCCCCACCCCTGAAGGACGATGGTCTGGAAATTACGTTCGT------CTATT--CTCTGTCAC s panTro5.chr3 2503331 185 - 202621043 TCTTTGCCTC-----TCTGCCTGATGTTCTTTCTCTCCGTGTCTCAGAAGGGACTGCTTTGCCTGCATCCCTTTTGC--------------------------------------------C---------C------CACGT-GCGTTCTC--------CCAGGTGCGA----------------------------------------GACAATGGCACC-----------GAGAGGTTTTCTTCTCCA-CGGGCCCCACCCCTGAAGGACGATGGTCTGGAAATTACGTTCGT------CTATT--CTCTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97927 185 - 190779 TCTTTGCCTC-----TCTGCCTGATGTTCTTTCTCTCCGTGTCTCAGAAAGGACTGCTTTGCCTGCATCCCTTTTGC--------------------------------------------C---------C------CACGT-GCGTTCTC--------CCAGGTGCGA----------------------------------------GACAATGGCACC-----------GAGAGGTTTTCTTCTCCA-CGGGCCCCACCCCTGAAGGACGATGGTCTGGAAATTACGTTCGT------CTATT--CTCTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49240 185 - 106623 TCTTTGCCTC-----TCTGCCTGATGTTCTTTCTCTCCGTGTCTCAGAAGGGACTGCTTTGCCGGCATCCCTTTTGC--------------------------------------------C---------C------CACGT-GCGTCCTC--------CCAGGTGCGA----------------------------------------GACAATGGCACT-----------GAGAGGTTTTCTTCTCCA-CGGGCCCCACCCCTGAAGGACGATGGTCTGGAAATTATGTTCGT------CTATT--CTCTGTAAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2815116 185 - 123690457 TCTTTGCCTC-----TCTGCCTGATGTTCTTTCTCTCCGCGTCTGAGAAGGGACTGCTTTGCCTGCAACCCTTTTGC--------------------------------------------C---------C------CACGT-ACGTCCTC--------CCAGGTGCGA----------------------------------------GACAATGGCATT-----------GAGAGATTCTCTTCTCCA-CGGGCCCCACCCCTGAAGGACGATGATCTGGAAATTACGTTCGT------CTATT--CTCTGTCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2321256 221 - 204787373 TCTTTACCTC-----TCTGCCTGACGTTCTTTCTCTCCGTGTGCCAGAAGGGACTGCTTTGCCCACATCCCTTTTGCCTCACATGCGTCCTCCCAAGTGTGAGACAATTGTGC--------C---------C------CACGT-GCGTCCTT--------CCAGGTGCAA----------------------------------------GACAACGGCGTT-----------GGGAGATTTTATTCTCCA-CGGGCTCCATCCCTGGAGGACGATGGTCTGGAAATTGCGTTCGT------CTGTT--CTCTGTCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192387011 221 - 192460366 TCTTTGCCTC-----TCTGCCTGACGTTCTTTCTCTCCGTGTGCCAGAAGGGACTGCTTTGCCCACATCCCTTTTGCCTCACATGCGTCCTCCCAAGTGTGAGACAATTGTGC--------C---------C------CACGT-GCGTCCTT--------CCAGGTGCAA----------------------------------------GACAATGGCGTT-----------GGGAGATTTTATTCTCCA-CGGGCTCCATCCCTGGAGGACGATGGTCTGGAAATTGCGTTCGT------CTGTT--CTCTGTCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19126051 232 - 19675229 TCTTTGCCTC-----TCTGCCTGACGTTCTTTCTCTCCGTGTGCCAGAAGGGACTGCTTTGCCCACATCCCTTTTGCCTCACATGCGTCCTCCCAAGTGTGAGACAATTGTGC--------C---------C------CACGT-GTGTCCTT--------CCAGGTGCAA----------------------------------------GACAACGGCGTTTTTATTCTAACGGGAGATTTTATTCTCCA-CGGGCTCCATCCCTGGAGGATGATGGTCTGGAAATTGCGTTCGT------CTGTT--CTCTGTCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359651 221 - 16847902 TCTTTGCCTC-----TCTGCCTGACGTTCTTTCTCTCCGTGTGCCAGAAGGGACTGCTTTGCCCACATCCCTTTTGCCTCACATGCGTCCTCCCAAGTGTGAGACAATTGTGC--------C---------C------CACGT-GCGTCCTT--------CCAGGTGCAA----------------------------------------GACAACGGCGTT-----------GGGAGATTTTGTTCTCCA-CGGGCTCCATCCCTGGAGGACGATGGTCTGGAAATTGCGTTCGT------CTGTT--CTCTGTCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91332273 221 + 91754291 TCATTGCCTC-----TCTGCCTGACGTTCTTTCTCTCCGTATGTCAGAAGGGACTGCTTTGCCCACATCCCTTTTGCCTCACATGCGTCCTCCTAGGTGTGAGA-----------------CAATTTTGCCC------CACGT-GCGTCCTT--------CCAGGCGCAA----------------------------------------AACAACGGCGTT-----------GGGAGATTTTGTTCTCCA-CGGGCTCCATCCCTGGAGGACGATGGTCTGGAAATTGCGTTCAT------CTGTT--CTCTGTCAC i chlSab2.chr15 I 8 C 0 s manLeu1.NW_012102020v1 1397080 221 + 1977891 TCTTTGCCTC-----TCTGCCTGACGTTCTTTCTCTCCATGTGCCAGAAGGGACTGCTTTGCCCACATCCCTTTTGCCTCACATGCGTCCTCCCAAGTGTGAGA--------CAATTGTGCC---------C------CACGT-GCGTCCTT--------CCAGGTGCAA----------------------------------------GACAACGGCGTT-----------GGGAGATTTTATTCTCCA-CGGGCTCCATCCCTGGAGGACGATGGTCTGGAAATTGCGTTCGT------CTGTT--CTCTGTCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7338386 221 - 7796314 TCTTTGCCTT-----TCTGCCTGATGTTCTTTCTCTCCGTGTGTCAGAAGGGACTGCTTTGCCCACATCCCTTTTGCCTCACATGCGTCCTCCCAGGTGTGAGACAA--------------T---------TTTGCCCCACGT-GCATCCTT--------CCAGGTGCAA----------------------------------------GACGATGGCGTT-----------GGGAGATTTTATTCTCCG-CGGGCTCCATCCCTGGAGGACGAGGGTCTGGAAATTGTGTGTGT------CTATT--CTCTGTCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73811082 182 + 74750902 CCTTTGCCTCAGGAGGGTGCCTGAGTTCCTTCCTCTCTGTGTGTCAGAAGGGACTGCTCTGCCTGCATCCCCTTTGC--------------------------------------------C---------C------CCCGT-GTGTCCTC--------CCAGGTGTAA----------------------------------------GACAATGGCACT-----------GGGAGATTTTCTGCTCCACCGG--TCCACCCTTGAAGAATGAGGGTCTGGAAATTACATTCA---------------TCTGTGAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17261076 176 - 17725628 CCTTTGCCTC-------TGCCTGAGTTTCTTTCTCTCCGTGTGTCAGAAGGGACCGCTGTGCCTGCACCCCCTTTG---------------------------------------------C---------C------CACGT-GTGTCCTC--------CCAGGTGTAA----------------------------------------GACAATGGCACT-----------GGGAGATTTTCTTCTCCACCGGGCTCCACCCTTGAAGAATGAGGGTCTGGAAATTACGTTCG---------------TCTGTCAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6349001 162 + 6778120 CCTTTGCCTC-------TGCCTGAGTTCCTTTCTCTCTGTGTGTCAGAAGGGACTGCTGTGCCCGCATCCCCTTTG---------------------------------------------C---------C------CATGT-GTGTCTTC--------CCAGGTGTAA----------------------------------------GACAATGGCACT-----------GGGAGATTTTCTTCTCCACCGGGCTCCACACTTGAAG--------------AATTACATTCG---------------TCTGTCAC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 189558 180 + 608964 TGATCACCTC-----TCTGC------TTCATTTTCTCTGTGCATGAGAAGGGACTCCTCTCTCTGCATTCTGTTTGC--------------------------------------------T---------C------CATGT-GGCACCACCACCACCACCAGGTGCAA----------------------------------------GATG-TAGCATC-----------AGAAGATTTTCTTCTCCACTAGGTTCGACTCCTGAGG--TGACATTCTGGAAATTACTCCCAT------CTAGT--AT-----AC i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32774096 177 + 98207768 ----TGACCA-----CCAAACTATCTCCTTTTGCTTTTCTGGGCACGGAGGGGTCACTCCGTC-ACACGTTCTTTGT--------------------------------------------T---------C------CTTAT-GGCACAAC--------CTTGGCATG-------------------------------------------CAGTGGCATT-----------ACACGGCTTTCTGCCACCCTGGGC----ATCCTGAAAATCGATGGTATGAAGTTAACTCCCTTCCACCCCTACT--CTCTGT--- i mm10.chr16 C 0 C 0 s canFam3.chr33 2305624 155 - 31377067 CCT----CTC-----TCTGGCCCATTTTCTTTCTTTCT------------------CTTTGCG-----CCCTTTGGC--------------------------------------------G---------C------CAGGTGGCAGCCTC--------CCAGGTGCCA----------------------------------------GCCAAT-----C-----------AGGAGATTTTCTCCCTCCCTGGGCTCCTCTCCTGAAGAGTGATAGTCTGGGAGCTGCTCTTGT------CTGTC--CCCTACTAT i canFam3.chr33 I 6 I 3 s dasNov3.JH569502 2683273 227 - 6579706 TGATTACCTC-----TCCGCCTCATTTTCTTTATCT--GTACACAAGAAGGTACTGCTTTTTCTGCACCCCTTTTGT--------------------------------------------T---------C------CACGTGGCATCCTC--------TCAGGCGGAAGAAAAAGATCAAAACTGTCTAATCCCACTCCCAGAGTGATGACAATGGCATC-----------AGGAGATTTTCTTCTCCACTGGATGTCTCTCTGGAAGAGCGATGGCCTGGAGGTTGTTCTCAT------CTATTTCCTCCATCAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14779468 173 - 22200726 I e micMur3.chr1 88369194 177 + 114275543 I a score=572856.000000 s hg38.chr3_KI270934v1_alt 36848 45 + 163458 TTCCTTTCAATCTGCTGTTTTAAGGAGACTTTCCTATTTTCTTGA s panTro5.chr3 2503516 45 - 202621043 TTCCTTTCAATCTGCTGTTTTAAGGAGACTTTCCTATTTTCTTGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98112 45 - 190779 TTCCTTTCAATCTGCTGTTTTAAGGAGACTTTCCTATTTTCTTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49425 45 - 106623 TTCCTTTCAATCTGCTGTTTTAAGGAGACTTTCCTATTTTCTTGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2815301 45 - 123690457 TTCCTTTCAATCTGCTGTTTTAAGGAGACTTTCCTATTTTCTTGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2321477 41 - 204787373 TTCCTTTCAATCTGCTGTTCT----AGGCTTTCCTATTTTCTTGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192387232 41 - 192460366 TTCCTTTCAATCTGCTGTTCT----AGGCTTTCCTATTTTCTTGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19126283 41 - 19675229 TTCCTTTCAATCTGCTGTTCT----AGGCTTTCCTATTTTCTTGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359872 41 - 16847902 TTCCTTTCAATCTGCTGTTCT----AGGCTTTCCTATTTGCTTGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91332494 45 + 91754291 TTCCTTTCAATCTGCTGTTCTAGGGAGGTTTTCCTATTTTCTTGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1397301 41 + 1977891 TTCCTTTCAATCTGCTGTTCT----AGGCTTTCCTATTTTCTTGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7338607 45 - 7796314 TTCCTTTCAATCTGCTGTTCTAGGGAGACGTTCCTATTTTCTTGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73811264 45 + 74750902 TTCCTTTCAATCTGCTGTTTTAAGGAGACTTTCGTATTTTCTTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17261252 45 - 17725628 TTCCTTTCAATCTGCTGTTTTAAGGAGACTTTCCTATTTTCTTGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6349163 45 + 6778120 TTCCTTTCAACCTGCTGTTTTAAGGAGACTTTCATATTTTCTTGA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88369371 45 + 114275543 TTCCTTTCAACCTGCTGCTTTAAGGAGATTTTCCCATGTTCTTGA i micMur3.chr1 I 177 I 115 s proCoq1.NW_012133858v1 14779641 45 - 22200726 TTCCTTTCAACCTGCTGCTTTAAGGAGATTTTCCTATGTTCTTGA i proCoq1.NW_012133858v1 I 173 I 1 s otoGar3.GL873829 189739 45 + 608964 CTAGTATCAACCTGCTATTTCAAGGAGACTTTCCTATTTTCTTGA i otoGar3.GL873829 I 1 I 1 s mm10.chr16 32774273 20 + 98207768 -TCCTTCCAAGCTGTTCTTTA------------------------ i mm10.chr16 C 0 C 0 s canFam3.chr33 2305782 38 - 31377067 CGATTCTCAACCTGCTGTTTTAAGGAGACTTTC-------CGTAA i canFam3.chr33 I 3 I 5 s dasNov3.JH569502 2683500 45 - 6579706 CTCCTTTCAACCTCCTGTTTTAAGAAGACTTTCCTAATTCATTAA i dasNov3.JH569502 C 0 C 0 a score=1150009.000000 s hg38.chr3_KI270934v1_alt 36893 133 + 163458 AAAATAT-----CAG------TTTGATCTGAA-----------G-----------ATATGTAGTAGTGTTTCACTACAGTCTGGTGTCTGAAGGGGGTGTCTGGG--AAAGGTCCAGGAAGTGGGGG----GTGGGTGAGAAATCAGGGCAAAGGATGGGGCTGCCGTGAGA s panTro5.chr3 2503561 133 - 202621043 AAAATAT-----CAG------TTTGATCTGAA-----------G-----------ATATGTAGTAGTGTTTCACTACAGTCTGGTGTCTGAAGGGGGTGTCTGGG--AAAGGTCCAGGAAGTGGGGA----GTGGGTGAGAAATCAGGGCAAAGGATGGGGCTGCTGTGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98157 133 - 190779 AAAATAT-----CAG------TTTGATCTGAA-----------G-----------ATATGTAGTAGTGTTTCACTACAGTCTGGTGTCTGAAGGGGGTGTCTGGG--AAAGGTCCAGGAAGTGGGGA----GTGGGTGAGAAATCAGGGCAAAGGATGGGGCTGCTGTGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49470 132 - 106623 AAAATAT-----CAG------TTTGATCTGAA-----------G-----------ATACGTAGTAGTGTTTCACTACAGTCTGGTGTCTGAAGGGGGTGTCTGGG--AAAGGTCCAGGAAGTGGGG-----GTGGGTGAGAAATCAGGGCAAAGGATGGGGCTGCTGTGAGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2815346 133 - 123690457 AAAATAT-----AAG------TTTGATCAGAA-----------G-----------ATATGTAGCAGTGTTTCACTACAGTCTGGTGTCTGAAGGGGGTGTCTGGG--AAAGGTCCAGGAAGTGGGGG----GTGGGTGAGAAACCAGGGCAAAGGATGGGGCTGCTGTGAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2321518 132 - 204787373 AAAGTGT-----AAG------TTGGATCAGAA-----------G-----------ATGTGTAGCAGTGTTTCACTACAGTGTGGTGTCTGAAGGGGGTGT-TGGG--AAAGGCCCAGGAAGTGGGGG----GTGGGTGAGAAATCAGGGCAAAGGATGGGGCTGCTGTGAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192387273 133 - 192460366 AAAGTGT-----AAG------TTGGATCAGAA-----------G-----------ATGTGTAGCAGTGTTTCACTACAGTGTGGTGTCTGAAGGGGGTGTCTGGG--AAAGGTCCAGGAAGTAGGGG----GTGGGTGAGAAATCAGGGCAAAGGATGGGGCTGCTGTGAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19126324 132 - 19675229 AAAGTGT-----AAG------TTGGATCAGAA-----------G-----------ATGTGTAGCAGTGTTTCACTACAGTGTGGTGTCTGAAGGGGGTGT-TGGG--AAAGGTCCAGGAAGTGGGGG----GTGGGTGAGAAATCAGGGCAAAGGATGGGGCTGCTGTGAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16359913 133 - 16847902 AAAGTGT-----AAG------TTGGATCAGAA-----------G-----------ATGTGTAGCAGTGTTTCACTACAGTGTGGTGTCTGAAGGGGGTGTCTGGG--AAAGGTCCAGGAAGTGGGGG----GTGGGTGAGAAATCAGGGCAAAGGATGGGGCTGCTGTGAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91332539 44 + 91754291 AAAGTGT-----AAG------TTGGATC---A-----------G-----------ATGTGTAGCAGTGTTTCACTACAGT-------------------------------------------------------------------------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1397342 133 + 1977891 AAAGTGT-----AAG------TTGGATCAGAA-----------G-----------ATGTGTAGCAGTGTTTCACTACAGTGTGGTGTCTGAAGGGGGTGTCTGGG--AAAGGTCCAGGAAGTGGGGG----GTGGGTGAGAAATCAGGGCAAAGGATGGGGCTGCTGTGAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7338652 133 - 7796314 AAAATGT-----AAG------TTGGATCAGAA-----------G-----------ATGTGTAACAGTGTTTCACTACAGTGTGGGGTCTGAAGGGGGTGTCTGGG--AAAGGTCCAGGAAGTGGGGG----GTGGGTGAGAAATCAGGGCAAAGGATGGGGCTGCTGAGAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73811309 109 + 74750902 AAAATAT-----AAA------TTTGATCAGAA-----------G-----------ATATATCG------------------------CTGGAGGGGCTGTCTGGTC-AAAGGTCCAGGAAGTGGGG-----GTGGGTGAGAAATCAGGGAAAAGTATGGGACTGCCATGAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17261297 133 - 17725628 AAAATAT-----AAG------TTTGATCAGAA-----------G-----------ATGTGTCGCCGTGTTTCCCTCTAGTCCGGTGTCTGAAGCGGGTGTCTGGTC-AAAGGTCCAGGAAGTGGGG-----GTGGGTGAGAAATCAGGGCGAAGGCTGGGGCCGCTGTGACA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6349208 132 + 6778120 GAAATAT-----AAA------TTTGATCAGAA-----------G-----------ATATGTCGCCGTCTTTCACTCTAGTCCGGTGTCTG-AGGGGGCGTCTGGTC-AAAGGTCCAGGAAGTGGGG-----GTGGGTGAGAAATCAGGGCAAAGGATGGGGCTGCTGTGACA i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14779687 138 - 22200726 -AAACATAAGACAGG------TTCGATCAGAA-----------G-----------ATAGGTAGCAGTTTTTCACTGTAGTCTGGTGCCTGAAGGGG-TGACTGGTC-AAAGGTCTGGGAAGTGAGAG---AGTGGGTGAAAAATCAGGGCTAGGGCTGGGGTTACTGTGAGG i proCoq1.NW_012133858v1 I 1 C 0 s otoGar3.GL873829 189785 131 + 608964 -AAACAT-AGACAGG------TTCCATCAGAA-----------G-----------ATATGTAGCAGGATTTCACTGCAGTATGGTGCCTAAAGGG------TGGTG-AGAGGTCCAGAAAGTGAGAG----GTGGGTGAGACATCAAGGCAAGGGCTGGGGTTGCTGTGAGG i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32774293 87 + 98207768 ---------------------------------------------------------------------TTCTCTGTATTCTGACATTTGATGAGG-TATC------CCAGGCCTGGAAAGTCAGAG----GACGGGACGTTAAAAAGGCAGAAGAGAGG----CTGGGAG- i mm10.chr16 C 0 C 0 s canFam3.chr33 2305825 145 - 31377067 AAACCAT-----AAGACACCTTTGGATCAGAAGAGTCCTTGCTG-----------ATACGTAGCAGCGTTTCACTGTAGTCTGGTGTCTGAAGGTC-----------AAAGGTGCAAGAAGCGGGAGGAGGGTGGGCAAGAAATCAGGGCCAGGGATGGGGCTGCTGTGAAG i canFam3.chr33 I 5 C 0 s dasNov3.JH569502 2683545 139 - 6579706 AAAATTT-----AAGACACA-TTTTAGCAGAA-----------GAGTCTGTATACATGTATATCAATGTTTCACTGTAGTCTGAAGTCTG-AGGAGGTGGCTGGTTAAAAGGTCCAGGAATTGAGAG------GGAT---------GGGCAAGGGAAGTGGCTTCTGTGAAG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88369416 115 + 114275543 I a score=880035.000000 s hg38.chr3_KI270934v1_alt 37026 73 + 163458 GTGAAGCCAGTTTGGCCGGCAGCGCAGCCTGGGGAGGTGTCTGGAGGATCCTGGCCTTG-------ATCCTCCATCCCCC- s panTro5.chr3 2503694 73 - 202621043 GTGAAGCCAGTTTGGCTGGCAGCGCAGCCTGGGGAGGTGTCTGGAGGATCCTGGCCTTG-------ATCCTCCATCCCCC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98290 73 - 190779 GTGAAGCCAGTTTGGCTGGCAGCGCAGCCTGGGGAGGTGTCTGGAGGATCCTGGCCTTG-------ATCCTCCATCCCCC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49602 73 - 106623 GTGAAGCCAGTTTGGCCGGCAGCGCAGCCTGGGGAGGTGTCTGGAGGGTCCTGGCCTTG-------AACCTCCATCCTCC- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2815479 73 - 123690457 CTGAAGCCAGTTTGGCCGGCAGCGCAGCCTGGGGAGGTGTCTGGAGGATCCTGGCCTTG-------ATCCTCCATCCCCC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2321650 73 - 204787373 ATGAAGCTGGTTTGGCTGGCAGCATAGCCTGGGGAGGTGCCTGGAGGATCCTGGCGTTG-------ATCCTCCATCCCCC- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192387406 73 - 192460366 ATGAAGCTGGTTTGGCTGGCAGCATAGCCTGGGGAGGTGCCTGGAGGATCCTGGCCTTG-------ATCCTCCATCCCCC- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19126456 73 - 19675229 ATGAAGCTGGTTTGGCTGGCAGCATAGCCTGGGGAGGTGCCTGGAGGATCCTGGCGTTG-------ATCCTCCATCCCCC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16360046 73 - 16847902 ATGAAGCTGGTTTGGCTGGCAGCATAGCCTGGGGAGGTGCCTGGAGGATCCTGGCCTTG-------ATCTTCCATCCCCC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91332583 67 + 91754291 ------CTGGTTTGGCTGGCAGCATAGCCTGGGGAGGTGCCTGGAGGACCCTGGCCTTG-------ATCCTCCATCCCCC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1397475 73 + 1977891 ATGAAGCTGGTTTGGCTGGCAGCATAGCCTGGGGAGGTGCCTGGAGGATCCTGGCCTTG-------ATCCTCCATCCCCC- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7338785 72 - 7796314 ATGAAGCTGGTTTGGCTGGCAGCATAGCCTGGGGAGGTGCCTGGAGGATCCTGGCCTTG-------ATCCTCCA-CCCCC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73811418 73 + 74750902 CTGAAACCAGTTTGACTGGCAGCATAGCCTGGGGAGGTGTCTGGAGGACCCTGGCCTTT-------ATCCTGCATCCCCC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17261430 72 - 17725628 CTGAAGCCAGTCTGACTGGCAGCGTAGCCTGGGGAGGTGTCTGGAGGATCCTGGCC-TT-------ATCCTGCATCCCCT- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6349340 71 + 6778120 CTGAAGCCAGTTTGAGTGGT-GTGTAGCCCGGGGAGGTGCCTGGAGGATCCCGGCA-TT-------GTCCTGTATACCCG- i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88369531 73 + 114275543 GTGAAGCCAGTTTGGCTTGCAGTGTAGCCTGGGAAAGTGTTGGGAGGATCCTGGCCTTC-------CTCCTCTATCCCCC- i micMur3.chr1 I 115 I 43 s proCoq1.NW_012133858v1 14779825 73 - 22200726 GTGAAGCCAGTTTGGCTTGCAGTGTAGCCTGGGGAAGTGTCAGGAGGATCCTGGCCTTT-------GTCCTCCATCCCCC- i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 189916 73 + 608964 GCAAAGGCAGTGTGGCCTGCAGTGTAGACTAGGGAAGAGTCGGGAGGATCCTGGTTTTC-------ATCCTGCATCCTCC- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32774380 61 + 98207768 GTGAAGCCATTCC-----ACACTGAAGTTTGGGGATGTGTTAAGAGGACCATG--CTTG-------GTCC-CCATC----- i mm10.chr16 C 0 C 0 s canFam3.chr33 2305970 80 - 31377067 GGGAAGCCAGTTTTGCCTACAGGGTAGCCTGGGGAAGCATCAAGGGGATCCTAGCCTTGGGGCCTTATTCTCTGTCCCTC- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2683684 43 - 6579706 -------------------------------GTGAAGTGCCAGGATGATCCTGGCCTTT-------ATCTACCATGTCCCC i dasNov3.JH569502 C 0 C 0 a score=597847.000000 s hg38.chr3_KI270934v1_alt 37099 58 + 163458 AGGATGTCCCATCCTGGTGTGAGCCCAGCCAGGGCTGCCCTTTGGGGTTTCTT-CAGGA s panTro5.chr3 2503767 58 - 202621043 AGGATGTCCCATCCTGGTGTGAGCCCGGCCAGGGCTGCCCTTTGGGGTTTCTT-CAGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98363 58 - 190779 AGGATGTCCCATCCTGGTGTGAGCCCGGCCAGGGCTGCCCTTTGGGGTTTCTT-CAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49675 58 - 106623 AGGATGTCCCATCCTGGTGTGAGCCCAGCCAGGGCTGCCCTTTGGGGTTTCTT-CAGGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2815552 57 - 123690457 AGGATGTCCCATCCTGGTGTGAGCCCAGCCAGGGCTG-CCTTTGGGGTTTCTT-CAGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2321723 58 - 204787373 AGGATGTGCCATCCTGGTGCAAGCCCAGCGAGGGCTGCCCTTTGGGGTTTCTT-CAGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192387479 58 - 192460366 AGGATGTGCCATCCTGGTGCAAGCCCAGCGAGGGCTGCCCTTTGGGGTTTCTT-CAGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19126529 58 - 19675229 AGGATGTGCCATCCTGGTGCAAGCCCAGCGAGGGCTGCCCTTTGGGGTTTCTT-CAGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16360119 58 - 16847902 AGGATGTGCCATCCTGGTGCAAGCCCAGCGAGGGCTGCCCTTTGGGGTTTCTT-CAGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91332650 58 + 91754291 AGCATGTGCCATCCTGGTGAAAGCCCAGCGAGGGCTGCCCTTTGGGGTTTCTT-CAGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1397548 58 + 1977891 AGGATGTGCCATCCTGGTGCAAGCCCAGCGAGGGCTTCCCTTTGGGGTTTCTT-CAGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7338857 58 - 7796314 AGGATGTCCCATCCTGGTGCGAGCCCAGCGAGGGCTGCCCTTTGGGGTTTCTT-CAGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73811491 58 + 74750902 AGGAGGTCCCATCCTAGTGCAAGCCCAGGCGGGGCTGCCCTTTGGGGTTTCTT-CAGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17261502 57 - 17725628 -GGATGGCCCATCCTAGTGCAAGCCCAGGCGGGGCTGCCCTTTGGGGTTTCTT-CAGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6349411 58 + 6778120 AGGTTGGCCCATCCTAGTGCAAGCCCAGGCAGGGCTGCCCTTTGGGGTTTCTT-CAGGG i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14779898 43 - 22200726 TGGACATGCCATCCTGG-------------GGAACTGCCCTTTGGGGTCTCTT-TAG-- i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 189989 52 + 608964 TGGATGTACCACACTGGTGCAGGCCCCGGCAGAGCTGCCCTTGGGGGTAGCT------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32774441 55 + 98207768 ---ATGACCCATCCTGGTACAGCCACAGGCAGGGATGCATTCAGGGGCCTCTT-CATTA i mm10.chr16 C 0 I 4 s canFam3.chr33 2306051 50 - 31377067 TAGATGTCCCGTCCCGGTGCAGGCCTGGGCAGGGTTGC--------ATCTCTT-CAGGG i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2683727 52 - 6579706 AGGATG-----TCTTTGGGGCACCCTAAAGGTCTTTGCCCTTTAGGGTCTTTTACAA-- i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88369604 43 + 114275543 I a score=1213118.000000 s hg38.chr3_KI270934v1_alt 37157 90 + 163458 GGAAACTGCTTTCCCCTCTGTGGCGTTCCCCGCTACAATCAGTATGTTGGACTGGTGCCACGTCCTTCCAGCTGGGAGCGTGACCAGGAT s panTro5.chr3 2503825 90 - 202621043 GGAAACTGCTTTCCCCTCTGTGGCGTTCCCCGCTACAATCAGTATGTTGGACTGGTGCCACCTCCTTCCAGCTGGGAGCATGACCAGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98421 90 - 190779 GGAAACTGCTTTCCCCTCTGTGGCGTTCCCCGCTACAATCAGTATGTTGGACTGGTGCCACCTCCTTCCAGCTGGGAGCATGACCAGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49733 90 - 106623 GGAAACTGCTTTCCCCTCTGTGGCGTTCCCCGCTACAATCAGTATGTTGGACTGGTGCCACCTCCTTCCAGCTGGGAGCGTGACCAGGAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2815609 90 - 123690457 GGAAACCGCTTTCCCCTCTGTGGCGTTCCCCGCTACAATCAGTATGTTGGACTGGTGCCACCTCCTTCCAGCTGGGAGCGTGACTAGGAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2321781 90 - 204787373 GGAAACTGCTTTTCCCTCTGTGGTGTCCCCCGTTACAATCAGTATGTTGGACTGGTGCCACCTCCTTCCAGCTGGGAGCGTGACCAGGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192387537 90 - 192460366 GGAAACTGCTTTTCCCTCTGTGGTGTCCCCCGTTACAATCAGTATGTTGGACTGGTGCCACCTCCTTCCAGCTGGGAGCATGACCAGGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19126587 90 - 19675229 GGAAACTGCTTTTCCCTCTGTGGTGTCCCCCGTTACAATCAGTATGTTGGACTGGTGCCACCTCCTTCCAGCTGGGAGCGTGACCAGGAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16360177 90 - 16847902 GGAAACTGCTTTTCCCTCTGTGGTGTCCCCCGTTACAATCAGTATGTTGGACTGGTGCCACCTTCTTCCAGCTTGGAGCGTGACCAGGAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91332708 90 + 91754291 GGAAACTGCTTTTCCCTCTGTGGTGTCCCCCGTTACAATCAGTATGTTGGACTGGTGCCACCTCCTTCCAGCTGGGAGCGTGACCAGGAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1397606 90 + 1977891 GGAAACTGCTTTTCCCTCTGTGGTGTCCCCTGTTACAATCAGTATGTTGGACTGGTGCCACCTCCTTCCAGCTGGGAGCGTGACCAGGAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7338915 90 - 7796314 AGAAACTGCTTTTCCCTCTGTGGTGTCCCCCGTTACAATCAGTATGTTGGACTGGTGCCACCTCCTTCCAGCTGGGAGCGTGACCAGGAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73811549 90 + 74750902 GGAAACTGCTTTCCCCTCTGTGGAGTCCCCTGCTACAGTCAGTAAGTTGGGCTGGTGCTACCTCCTTCCAGCTGGGAGTTTGACCAGTAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17261559 90 - 17725628 GAGAACTGCTCTCCCCTCTGTGGCGTCCCCTGCTACAATCAGTAAGTTGGGCTGGTGCGACCTCCTTCCAGCTGGGGGTGTGACCAGCAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6349469 90 + 6778120 GAAAACTGCTTTCCCCTCTGTGGTGTCCCCTGCTACAATCAGTAAGTTGGGCTGGTGTGACCTCCTTCCAGCTGGGAGTGTGACCAGGAT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88369647 89 + 114275543 GGAAACTGCCTTCCTCTCTGAGGAGTTCCTGCCTACAATCAGTACG-TGGGCTGGTGCTACCTCCTTCCAGCTTGGAGCGTGACCAGGAT i micMur3.chr1 I 43 I 107 s proCoq1.NW_012133858v1 14779941 86 - 22200726 GGGAACTGCCTTCCCCTCTGAGGAGTCCCTGCCTACAATCAGTAAG-TGGGATCATGCTATCTCCTTCCAGCTTGGAGCCTGGCCAG--- i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 190041 75 + 608964 -------------CCCTCTATGGAGTTCCTGCCTATGG-CAGTAAG-CAAGCTGGTGCTACCTCCTTCCAGTGTGGAGGGTGACCAAGAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32774500 89 + 98207768 GTGGGTAGCCTTCCCTTATGT-GTATTTCTACCTACACCCAGCATGTTCAGCAGGTGCTGCCTCCCTCCAGCTAGGAGCATGACCACCAT i mm10.chr16 I 4 C 0 s canFam3.chr33 2306101 82 - 31377067 GGCAACTGCCTT-CCCTCTCTGGAGTTCCAC-CTGCAATCACTCAGTGGGGCTCATGCTACC----TCCAGCGTGGGGC--GACCAAGAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2683779 86 - 6579706 GGAAACTGCCTTCCCCTCTGTGGAGTTCTGTCCTATAATCTGTAAGTTGGGCTGGTGCTACC----TCCAGCTTGGAGCATGGCCAGGAT i dasNov3.JH569502 C 0 C 0 a score=922175.000000 s hg38.chr3_KI270934v1_alt 37247 104 + 163458 CACCCCC--GATACCAGCCTTGCTCAAAGGAAATGACCAATGAGATTTG-TCTggggag-ggggagggtggcctgagag----gggtggggga-AGCCCC-GTATCAGCA---ATCA s panTro5.chr3 2503915 103 - 202621043 CACCCC---GATACCAGCCTTGCACAAAGGAAATGACCAATGAGATTTG-TCTGGGGCG-GGGGAGGGTGGCCTGAGAG----GGGTGGGGGA-AGCCCC-ATATCAGCA---ATCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98511 102 - 190779 CACCCC---GATACCAGCCTTGCACAAAGGAAATGACCAATGAGATTTG-TCTGGGGCG-GGGGAGGGTGGCCTGAGAG----GGGT-GGGGA-AGCCCC-GTATCAGCA---ATCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49823 108 - 106623 CACCCCC--AATACCAGCCTTGCTCAAAAGAAATGACCAATGAGATTTG-TCTGCGGAGCGGGGAGGGTGGCCTGAGAG----GGGTGGGGGA-AGCCCT-GTATCAGCAATCATCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2815699 105 - 123690457 CACCCCC--GATACCAGCCTTGCTCAAAGGAAATGACCAATGAGATTTG-TCTGGGGAGGGGGGAGGGTGGCCTGAGAG----GGGTGGGGGA-AGCCCA-GTATCAGCA---GTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2321871 102 - 204787373 CACCC----GATACCAGCCTTGCTCAGAGGAAATCACCAATGAGATTTG-TCTGGGGAGTGGGGA-GGTGGCCTGAGAT----GGGTGGGAGA-AGCCCC-GCATCAGCA---ATCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192387627 102 - 192460366 CACCC----GATACCAGCCTTGCTCAAAGGAAATCACCAATGAGATTTG-TCTGGGGAGTGGGGA-GGTGGCCTGAGAT----GGGTGGGAGA-AGCCCC-GCATCAGCA---ATCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19126677 102 - 19675229 CACCC----GATACCAGCCTTGCTCAGAGGAAATCACCAATGAGATTTG-TCTGGGGAGTGGGGA-GGTGGCCTGAGAT----GGGTGGGAGA-AGCCCC-GCATCAGCA---ATCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16360267 104 - 16847902 CACCCCT--GATACCAGCCTTGCTCAAAGGAAATCACCAATGAGATTTG-TCTGGGGAGTGGGGA-GGTGGCCTGAGAG----GGGTGGGAGA-AGCCCC-GCATCAGCA---ATCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91332798 104 + 91754291 CACCCC---GATACCAGCCTTGCTCAAAGGAAATGACCAATGAGATTTG-TCTGGGGAGTGGGGAGGGTGGCCTGAGAG----GGGTGGGAGA-AGCCCC-GCACCAGCA---ATCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1397696 104 + 1977891 CACCCCT--GATACCAGCCTTGCTCAAAGGAAATCACCAATGAGATTTG-TCTGGGGAGTGGGGA-GGTGGCCTGAGAG----GGGTGGGAGA-AGCCCC-GCGTCAGCA---ATCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7339005 104 - 7796314 CACCCC---GATACCAGCCTTGCTCAAAGGAAATGACCAGTGAGATTTG-TCTGGGGAGTGGGGAGGGTGGCCTGAGAG----GGGTGGGAGA-AGCCCC-ACACCAGCA---ATCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73811639 103 + 74750902 TACCCCC-GCATACCAGCCTTGCTCAAAGAAAATGACCAGTGAGATCTG-TCTGGGGCA-GGGGAGGGTGGTCTGAGAG----TGG-GGGGGA-AGCCC--GCATCAGCA---ATCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17261649 105 - 17725628 TACCCCT-GCATACCAGCCTTGCTCAAAGAAAATGACCAGTGAGATCTG-TCTGGGGCAGGGGGAGGGTGATCTGAGAG----GGGTGGGGGA-AGCCC--GCATCAGCA---ATCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6349559 105 + 6778120 TAGCCCC-GCATACCAGCCTTGCTCAAAGAAAATGACCAGTGAGATCTG-TCTGGGGCAGGGGGAGGGTGGTTTCAGAG----GGGTGGGGGA-AGCCT--GCATCAGCA---ATCG i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14780027 84 - 22200726 ---------GATACCAGCC-TGCTCAAAGGAAATGCCTGATGAGATGTA---TGG------------GTGGTCTGAGAA----GGGTGGAGGA-AATCCCAGCATCAGCA---GTCA i proCoq1.NW_012133858v1 C 0 I 25 s otoGar3.GL873829 190116 96 + 608964 TAGCCCA-GGACATCAGCC-TGCTCAAAGGAAATGCCTGATGACATTTGAACTGG-----------TGGGGTCTGAGAG----GTGTAAGGGA-AATCCCAGCATTGGCA---ATCA i otoGar3.GL873829 C 0 I 25 s mm10.chr16 32774589 91 + 98207768 CACCCTGGGAACCCCAGCTCTACTCAGAAGGA---------------TG-CCTGAGGGTGTGGGAAGACCACCTCCGTAGTTCGAGTGTTAGA-TGCCA--GGAT--GCA---CT-- i mm10.chr16 C 0 C 0 s canFam3.chr33 2306183 91 - 31377067 CACTCCA-GGAAGCCAGCCGAGCTCA-AGGAAATGCCTGATGAC------TTTGAGG---------GGTGGCCTGAGAG----AGGCAGAGAA-AGGCCC-ACATCAGCT---CTCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2683865 93 - 6579706 CACTCCA-GGAATCCAGCCTTACTCA-AGGAAACGCCTGATAAGAT--------------GGGGAGGGTGGTCTGTAAG----GGGTGGGACAGAGTCCA-GCACCAGCA---ATCA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88369736 107 + 114275543 I a score=3870009.000000 s hg38.chr3_KI270934v1_alt 37351 251 + 163458 GACCACAGAGCCG----------------AGGA-------------------------GTCTCCCAGCTCTCAACATTCTCATCTTCCCCGGGGCAGAGAATGGGACGTTGCTGTGGACACCCAAGTCGCTGGAGCCATTCACTCTGGAGATTCTAGCAAGAAGTGCCAAGATTGGCTTGGCATCTGCACTCCAGCCCAGGACTGTGGTCTGCCATTGCAATGCAGAGAGCCAGTGTTTGTACAATCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTGAGTGTTGGGA s panTro5.chr3 2504018 275 - 202621043 GACCACAGAGCTG----------------AGGATGCATCAGACCA-CAGAGCTGAGGAGTCTCCCAGCTCTCAACATTCTCATCTTCCCTGGGGCAGAGAATGGGACGTTGCTGTGGACACCCAAGTCGCTGGAGCCATTCACTCTGGAGATTCTAGCAAGAAGTGCCAAGATTGGCTTGGCATCTGCACTCCAGCCCAGGACTGTGGTCTGCCATTGCAATGCAGAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTGAGTGTTGGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98613 275 - 190779 GACCACAGAGCTG----------------AGGATGCATCAGACCA-CAGAGCTGAGGAGTCTCCCAGCTCTCAACATTCTCATCTTCCCCGGGGCAGAGAATGGGACGTTGCTGTGGACACCCAAGTCGCTGGAGCCATTCACTCTGGAGATTCTAGCAAGAAGTGCCAAGATTGGCTTGGCATCTGCACTCCAGCCCAGGACTGTGGTCTGCCATTGCAATGCAGAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTGAGTGTTGGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49931 251 - 106623 GACCACAGAGCTG----------------AGGA-------------------------GTCTCCCAGCTCTCAACATTCTCATCTTCCCCGGGGCAGAGAATGGGACATTGCTGTGGACACCCAAGTCGCTGGAGCCATTCACTCTGGAGATTCTAGCAAGAAGTGCCAAGATTGGCTTGGCATCTGCACTCCAGCCCAGGACCGTGGTCTGCCATTGCAATGCAGAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTGAGTGTTGGGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2815804 274 - 123690457 GGGTGT-TAGATG----------------AGGATGCGTCAGACCA-CAGAGCTGAGGAGTCTCCCAGCTCTCAACGTTCTCATCTTCCCCCGGGCAGAGAATGGGACGTTGCTGTGGACACCCAAGTCGCTGGAGCCATTCACTCTGGAGATTCTAGCAAGACGTGCCAAGATTGGCTTGGCATCTGCACTCCAGCCCAGGACCGTGGTCTGCCATTGCAGTGCAGAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTGAGTGCTGGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2321973 274 - 204787373 GGGTGT-TGGATG----------------AGGATGCATCAGACCA-CAGAGCTGAGGAGTCTCCCGGCTCTCAACGTTCTCATCTTCCCCGGGGCAGAGAATGGGACGTTGCTATGGACACCCAAGTCGTTGGAGCCATTCACTCTGGAGATTCTAGCGAGAAGTGCCAAGATTGGCTTGGCATCTGCACTCCAGCCCAGGACTGTGGTCTGCCATTGCAATGCAGAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTGAGTGTTGGGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192387729 274 - 192460366 GGGTGT-TGGATA----------------AGGATGCATCAGACCA-CAGAGCTGAGGAGTCTCCCGGCTCTCAACGTTCTCATCTTCCCCGGGGCAGAGAATGGGACGTTGCTATGGACACCCAAGTCGTTGGAGCCATTCACTCTGGAGATTCTAGCAAGAAGTGCCAAGATTGGCTTGGCATCTGCACTCCAGCCCAGGACTGTGGTCTGCCATTGCAATGCAGAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTGAGTGTTGGGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19126779 274 - 19675229 GGGTGT-TGGATG----------------AGGATGCATCAGACCA-CAGAGCTGAGGAGTCTCCCGGCTCTCAACGTTCTCATCTTCCCCGGGGCAGAGAATGGGACGTTGCTATGGACACCCAAGTCGTTGGAGCCATTCACTCTGGAGATTCTAGCGAGAAGTGCCAAGATTGGCTTGGCATCTGCACTCCAGCCCAGGACTGTGGTCTGCCATTGCAATGCAGAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTGAGTGTTGGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16360371 274 - 16847902 GGGTGT-TAGATG----------------AGGATGCATCAGACCA-CAGAGCTGAGGAGTCTCCCGGCTCTCAACGTTCTCATCTTCCCCGGGGCAGAGAATGGGACGTTGCTATGGACACCCAAGTCGTTGGAGCCATTCACTCTGGAGATTCTAGCGAGAAGTGCCAAGATTGGCTTGGCATCTGCACTCCAGCCCAGGACTGTGGTCTGCCATTGCAATGCAGAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTGAGTGTTGGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91332902 274 + 91754291 GGGTGT-TGGATG----------------AGGATGCATCAGACCA-CAGAGCTGAGGAGTCTCCTGGCTCTCAACGTTCTCATCTCCCCCGGGGCAGAGAATGGGACGTTGCTATGGACACCCAAGTCGTTGGAGCCATTCACTCTGGAGATTCTAGCAAGAAGTGCCAAGATTGGCTTGGCATCTGCCCTCCAGCCCAGGACTGTGGTCTGCCATTGCAATGCAGAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTGAGTGTTGGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1397800 274 + 1977891 GGGTGT-TAGATG----------------AGGATGCATCAGACCA-CAGAGCTGAGGAGTCTCCCAGCTCTCAACGTTCTCATCTTCCCCGGGGCAGAGAATGGGACGTTGCTATGGACACCCAAGTCGTTGGAGCCATTCACTCTGGAGATTCTAGCGAGAAGTGCCAAGATTGGCTTGGCATCTGCACTCCAGCCCAGGACTGTGGTCTGCCATTGCAATGCAGAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTGAGTGTTGGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7339109 274 - 7796314 GAGTGT-TAGATG----------------AGGATGCACCAGACCC-CAGAGCTGAGGAGTCTCCCGGCTCTCAACGCTCTCATCTTCCCCGGGGCAGAGAATGGGACGTTGCTATGGACACCCAAGTTGTTGGAGCCATTCACTCTGGAGATTCTAGCAAGAAGTGCCAAGATTGGCTTGGCATCTGCACTCCAGCCCAGGACTGTGGTCTGCCATTGCAATGCAGAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTGAGTGTTGGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73811742 276 + 74750902 GGGTGT-TAGATGC--------------CAGGATGCATCAGACCA-CGGAGCAGAGGAGTCTCCCAGCTCTCAATGATCTCATTTTCCCCCGGGCAGAGAATGGGACATTGCTGTGGACACCCAAGTCACTGAAGCCATTCTCTCTGGAGATTCTAGCAAGAAGTGCCAAGACTGGCTTGTCGTCTGCACTCCAGCCCAGGACCATGGTCTGCTACTGCAGTGCAAAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTAGGCAGCTCCTCCCTTGAGGTGAGTGTTGGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17261754 276 - 17725628 GGGTGT-TAGATGC--------------CAGGAGGCATCAGACCG-CAGAGCAGAGGAGTCTCCCAGCTCTCAACGATCTCATTTTCCCCGGGGCAGAGAATGGGACATTGCTGTGGACACCCAAGTCGCTGAAGCCATTCTCTCTGGAGATTCTAGCAAGAAGCGCCAAGACCAACCTGTCGTCTGCTCTCCAGCCCAGGACCACGGTCTGCCACTGCACTGCGAAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCGGCTCCTCCCTGGAGGTGAGCGTCGGGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6349664 276 + 6778120 GGGTTT-TAGATGC--------------CAGGGTGCATCAGACCA-CAGAGCACAGGAGTCTCCCAGCTCTCAACGATCTCATTTTCCCTGGGGCAGAGAATGGGACATTGCTGTGGACACCCAAGTCGCTGGAGCCATTCTCTCTGGAGATTCTAGCAAGAAGTGCCAAGACGGGCTTGTCCTCTGCACTCCAGCCCAGGACCACGGTCTGCCACTGCAGTGCAAAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCAGCTCCTCCCTGGAGGTGAGTGTTGGGA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88369843 250 + 114275543 ----------------------------------------GACCA-CAGAGCAGAGGAGTCTTCCAGCTCTCAACTATCTCATCTTTCCT-GGGCAGAGAATGGAACATTGCTATGGACACCAAAGTCATTGACACCATTCAATCTGGAGATTCTAGCAAGAAGCGCCAAGGTTGGCTTGTCATCCCTACTCCAGCCCAAGACCGTGGTCTGCAATTGCAGTGCAGAGAGCCAGTGTGTATATAACATGACCAGCAGGGTGGGCAATTCCTCTCTGGAGGTGAGTGTTGGGA i micMur3.chr1 I 107 I 501 s proCoq1.NW_012133858v1 14780136 250 - 22200726 ----------------------------------------GACCA-CAGAGCAGAGGAGTCTTCTAGCTCTCAACGATCTCATCTTTCCT-GGGCAGAGAATGGGACATTGCTATGGACACCAAACTCATTGACACCGTTCACTCTGGAGATTCTAGCAAGAAGCACCAAAGTTGGCTTGTCATCCGTACTCCAGCCCAAGACCGTGGTCTGCAATTGCAGCAAAGAGAGCCAGTGTTTATATAACAAGACCAGCAGGGTGGGCAATTCCTCCCTCGAGGTGAGTGTTGGGA i proCoq1.NW_012133858v1 I 25 I 378 s otoGar3.GL873829 190237 240 + 608964 ----------------------------------------GACCA-CAGAGCAGAGGAGTCTTCCAGCTCTCAATGATCTCATCTTTCTT-GGGCAGAGAATGGGACATTGCTATGGACACCAAAGTCACTGGCACCATTCACTCTGGAGATCCTAGCAAGAAA---CAAAGTTGGCGTG---TCTGTATTCCAGCCCAAGACTGTGGTCTGCAGTTGCAGCACGAAGAGCCAGTGCTTATATAACAAGACCAGCAGGGTGGGCAATTCCTCCCTCGAGGTGAGTGTT---- i otoGar3.GL873829 I 25 C 0 s mm10.chr16 32774680 249 + 98207768 ----------------------------------------GACCA-CAGAGCGGAGGGCTCCCCCAGACACTGA-GGTCTCCTTTTCTCT-GGACAGAAAACGGGAGTTTGCAGTGGACACCAACATCCCCAGAAGCGTGTACCCTGGAGATTCTAGCGAGGGATGTCAGGACTAACTTGTCATGGGTACTCCAGCCCAAGACCGTGGCTTGCTTCTGCAGTAAGGAGGAGCAGTGTTTGTACAATGAAACCAGCAAAGAGGGCAATTCTTCCCTTGAGGTGAGTAGTGGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2306274 259 - 31377067 ------------------------------GGACGTGTCAGACAG-CA-AGCAGCCGAGGCCCCCAGCCCT-AACGGTCTTGTCTTCCCTGGGGCAGAGAACGGGACACTGCTGTGGACACCAAAGTCCTTGGAACCATTCACCCTGGAGATTCTAGCAAGAAACGTCAAAGTCAACTTGTCATCTGTGCTCCAGCCAAGGACAGTGGTCTGCGCTTGCAAGGACAGGAGCCAGTGTCTATATAATCAGACGGGCTGGATGGGCAATTCCTCCCTGGAGGTGAGTGAAAGGA i canFam3.chr33 C 0 I 4 s dasNov3.JH569502 2683958 289 - 6579706 GGTTGT-TAGATACCATAAAACCAGCTACAGGATGTATCAGACAAGCAGAGGAGAGGAGTC--CCAGCTCTTAATGATCTTGTCTTCCCCTGGATAGAGAACGGGACATTGCTATGGACCCCAAAGTCACTGGAACCATTCACTCTGGAGATTCTAGCAAGAAATACCAAGAATGGCTTGGCATCCGTACTCCGGCCCAAGGCCGTGGTCTGCAATTGCAGTGCAGAGAGCCAGTGTTTATTCAACCAGACCAGCTGGGTGGGCAATTCCTCCCTTGAGGTGAGTGTTGGGA i dasNov3.JH569502 C 0 C 0 a score=1202176.000000 s hg38.chr3_KI270934v1_alt 37602 147 + 163458 ---GGTGGGGGA-GGAGTTTCTGTGCCGAGGGGAGAGGAAATGGGAGTGGAATGGATGCTGTGATTCTGCCT--GTCCTGGGT-GTGTCTGTGTTGGGAGATGGGTGGAGCAGTGGTAGGTGAGTAGAGCAGATTCCAGTCTCAGGCCACAAAC s panTro5.chr3 2504293 147 - 202621043 ---GGCGGGGGA-GGAGTTTCTGTGCCGAGGGGAGAGGAAATGGGAGTGGAATGGATGCTGTGATTCTGCCT--GTCCTGGGT-GTGTCTGTCTTGGGAGGTGGGTGGAGCAGTGGTAGGTGAGTAGAGCAGATTCCAGTCTCAGGCCACAAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98888 147 - 190779 ---GGCGGGGGA-GGAGTTTCTGTGCCGAGGGGAGAGGAAATGGGAGTGGAATGGATGCTGTGATTCTGCCT--GTCCTGGGT-GTGTCTGTCTTGGGAGGTGGGTGGAGCAGTGGTAGGTGAGTAGAGCAGATTCCAGTCTCAGGCCACAAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50182 146 - 106623 ---GGTGGGGGA-GGAGTTTCTGTGCCGAGGGGAGAGGAAATGGGAGTGGAATGGATGCTGTGATTCTGCCT--GTCCTGGGT-GTGTCTGTATT-GGAGGTGGGTGGAGCAGTGGTAGGTGAGTAGAGCAGATTCCAGTCTCAGGCCACAAAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2816078 147 - 123690457 ---GGCGGGTGA-GGAGTGTCTGTGCCGAGGGGAGAGGAAATGGGAGTGGAACGGATGCTGTGATTCTGCCT--CTCCTGGGT-GTGTCTGTGTTGGGAGGTGGGTGGAGCAGTGGTAGGTGAGTAGAGAAGACTCCAGTCTCAGGCCATAAAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2322247 128 - 204787373 ---GGCAGGTGA-GGAGTTTCTGTGCCGAGGGGAGAGGAAACGGGAGTGGAACGGATGCTGTGATTCTGCCT--CTGCTGGGT-GTGTTGGTGTTGGGAGGTGGGTGGAGC-------------------AGATTCCAGTCTCAGGCCATAAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192388003 128 - 192460366 ---GGCAGGTGA-GGAGTTTCTGTGCCGAGGGGAGAGGAAACGGGAGTGGAACGGATGCTGTGATTCTGCCT--CTGCTGGGT-GTGTTGGTGTTGGGAGGTGGGTGGAGC-------------------AGATTCCAGTCTCAGGCCATAAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19127053 128 - 19675229 ---GGCAGGTGA-GGAGTTTCTGTGCCGAGGGGAGAGGAAACGGGAGTGGAACAGATGCTGTGATTCTGCCT--CTGCTGGGT-GTGTTGGTGTTGGGAGGTGGGTGGAGC-------------------AGATTCCAGTCTCAGGCCATAAAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16360645 128 - 16847902 ---GGCAGGTGA-GGAGTTTCTGTGCCGAGGGGAGAGGAAACGGGAGTGGAACGGATGCTGTGATTCTGCCT--CTGCTGGGT-GTGTTGGTGTTGGGAGGTGGGTGGAGC-------------------AGATTCCAGTCTCAGGCCATAAAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91333176 128 + 91754291 ---GGCAGGTGA-GGAGTTTCTGTGCCGAGGGGAGAGGAAACGGGAGTGGAACGGATGCTGTGATTCTGCCT--CTCCTGGGT-GTGTCTGTGTTGGGAGGTGGGTGGAGC-------------------AGATTCCAGTCTCAGGCCATAAAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1398074 128 + 1977891 ---GGCAGGTGA-GGAGTTTCTGTGCCGAGGGGAGAGGAAACGGGAGTGGAACGGATGCTGTGATTCTGCCT--CTGCTGGGT-GTGTTGGTGTTGGGAGGTGGGTGGAGC-------------------AGATTCCAGTCTCAGGTCAAAAAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7339383 128 - 7796314 ---GGCAGGTGA-GGAGTTTCTGTGCTGAGGGGAGAGGAAATGGGAGTGGAATGGATGCTGTGATTCTGCCT--CTCCTGGGT-GTGTCTGTGTTGGGAGGTGGGTGGAGC-------------------AGATTCCAGTCTCAGGCCATAAAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73812018 147 + 74750902 ---GGAGGGTGG-TTAGTGTCTGTGCTAAGGGGTGAGGAAATGGGAGTTGAAGGGATGCCGTGTTTCTGCCT--CTCCTGGGC-GTGTCTGTGTTGGGAGGTGGGTGGAGCTATGGTAGATGAGTGGAGCGGATACCAGTCTTAGGTCATAAAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17262030 148 - 17725628 ---GGAGGGCGGAGGAGCTTCTGTGCTGAGGGGCGAGGAAACGGGAGGTGAAGGGACGCTGTGTTTCCGCCT--CTCCTGGGC-ATGTCTGTGCTGGGAGGTGGCTGGAGCTGTGGTAGATGCGTAGagtggatacgggtcttaggccataaac i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6349940 124 + 6778120 ---GGA-GGTGGAGGAGTTTCTGCACTG-----------------------AGGGATGCTGTGTTTCTGCCC--CTCCTGGGC-GTGTCTGTGTTGGGAGGTGGGTGGAGCTCTGACAGATGAGTAGAGAGgataccagtcttaggccataaac i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 190477 139 + 608964 --------GGGA-TGAGTTTCTGTGTCCAGGGGAAAGGGAACGGGAATTGAAGG---GTTATGACTCAGCCT--CTCCTAGGCAGTGTCTGTGTTGGGAAG-GGGTGAACCTATGGTAGGTCAGTAGagcagataacaatctcaggccacaagc i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32774929 123 + 98207768 ------------------------GCTGGGGGAGGCGGGCA----AGTGG-AGGGATGCTGTGTGTGTGTTTTCTCCCGGGGA-AAGTGTATCTAGGGAGGAGGGTGGAGCTGTGGTGGGTAAGTGGCGCAGGGGCCA-TCTTGGGCTACAAAC i mm10.chr16 C 0 I 468 s canFam3.chr33 2306537 126 - 31377067 ---GGTGGGAGG-GAGACTTCCTTGTTGAGGGGAAAGGCAGTGGGAACGGAAGCGAT-----------GTCT--CGGTGGGAA-TTGTATGTGTTGGGAA----------CCAAGGCAGGGGAGGACAGTCAACCTCaatctcaggccatgaac i canFam3.chr33 I 4 C 0 s dasNov3.JH569502 2684247 132 - 6579706 GGAGCATGGAAG-GGAAGGTCAAAATCCAGGGCAAAGGAAGTGGGAATTAAAGGGATGGTATAGTTTAGCCT--CTCCTGGGTAATGTATATGTTGGGAGGTGAGTAGagc-------------------agatgccaatctcaggccaaaatc i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14780386 378 - 22200726 I e micMur3.chr1 88370093 501 + 114275543 I a score=220443.000000 s hg38.chr3_KI270934v1_alt 37749 21 + 163458 TCACATGGG-AAGAAAGAGAAC s panTro5.chr3 2504440 21 - 202621043 TCACATGGG-AAGAAAGAGAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99035 21 - 190779 TCACATGGG-AAGAAAGAGAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50328 21 - 106623 TCACATGGG-AAGAAAGAGAAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2816225 21 - 123690457 TCATGTGGG-AAGAAAGAGAAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2322375 21 - 204787373 TCACATGGG-AAGAAAGAGAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192388131 21 - 192460366 TCACATGGG-AAGaaagagaac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19127181 21 - 19675229 TCACATGGG-AAGAAAGAGAAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16360773 21 - 16847902 TCACATGGG-AAGAAAGAGAAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91333304 21 + 91754291 TCACATGGG-AAGAAAGAGAAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1398202 21 + 1977891 TCACATGGG-AAGAAAGAGAAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7339511 21 - 7796314 TCACATGGG-AAGAAAGAGAAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73812165 21 + 74750902 TCACCTGGG-AAGAAAGAGAAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17262178 21 - 17725628 tcacctggg-aagaaagagaat i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6350064 21 + 6778120 tcacctggg-aagaaagagaac i cebCap1.NW_016107444v1 C 0 I 843 s otoGar3.GL873829 190616 17 + 608964 tcgc-tgtg-agga---agaac i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2306663 22 - 31377067 ttacatgtgtaagaaacagaac i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2684379 22 - 6579706 tcatgtgtgtgaaaaatataac i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14780386 378 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370093 501 + 114275543 I a score=10424.000000 s hg38.chr3_KI270934v1_alt 37770 1 + 163458 T s panTro5.chr3 2504461 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99056 1 - 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50349 1 - 106623 T i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2816246 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2322396 1 - 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192388152 1 - 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19127202 1 - 19675229 T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16360794 1 - 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91333325 1 + 91754291 T i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1398223 1 + 1977891 T i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7339532 1 - 7796314 T i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73812186 1 + 74750902 t i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17262199 1 - 17725628 c i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 190633 1 + 608964 t i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2306685 1 - 31377067 t i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2684401 1 - 6579706 t i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14780386 378 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370093 501 + 114275543 I e cebCap1.NW_016107444v1 6350085 843 + 6778120 I a score=38008.000000 s hg38.chr3_KI270934v1_alt 37771 4 + 163458 TTCT s panTro5.chr3 2504462 4 - 202621043 TTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99057 4 - 190779 TTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50350 4 - 106623 TTCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2816247 4 - 123690457 TTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2322397 4 - 204787373 TTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192388153 4 - 192460366 ttct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19127203 4 - 19675229 TTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16360795 4 - 16847902 TTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91333326 4 + 91754291 TTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1398224 4 + 1977891 TTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7339533 4 - 7796314 TTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73812187 4 + 74750902 tttt i calJac3.chr17 C 0 I 138 s saiBol1.JH378146 17262200 4 - 17725628 tttt i saiBol1.JH378146 C 0 I 301 s otoGar3.GL873829 190634 4 + 608964 ttct i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2306686 4 - 31377067 gtct i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14780386 378 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370093 501 + 114275543 I e dasNov3.JH569502 2684402 0 - 6579706 C e cebCap1.NW_016107444v1 6350085 843 + 6778120 I a score=14670.000000 s hg38.chr3_KI270934v1_alt 37775 3 + 163458 ggc- s panTro5.chr3 2504466 3 - 202621043 ggc- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99061 3 - 190779 ggc- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50354 3 - 106623 ggc- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2816251 3 - 123690457 ggc- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2322401 3 - 204787373 ggc- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192388157 3 - 192460366 ggc- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19127207 3 - 19675229 ggc- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16360799 3 - 16847902 ggc- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91333330 3 + 91754291 ggc- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1398228 3 + 1977891 ggc- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7339537 3 - 7796314 ggc- i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 190638 3 + 608964 tgc- i otoGar3.GL873829 C 0 I 515 s canFam3.chr33 2306690 3 - 31377067 -tca i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14780386 378 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370093 501 + 114275543 I e dasNov3.JH569502 2684402 0 - 6579706 C e saiBol1.JH378146 17262204 301 - 17725628 I e calJac3.chr17 73812191 138 + 74750902 I e cebCap1.NW_016107444v1 6350085 843 + 6778120 I a score=268814.000000 s hg38.chr3_KI270934v1_alt 37778 47 + 163458 cgggtgcagtggctcacgc---ctttaatctc--ag----cacttttggaggctga s panTro5.chr3 2504469 47 - 202621043 cgggtgcagtggctcacac---ctttaatctc--ag----cacttttggaggctga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99064 47 - 190779 cgggtgcagtggctcacac---ctttaatctc--ag----cacttttggaggctga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50357 47 - 106623 cgggtgcaatggctcacgc---ctttaatctc--ag----cacttttggaggctga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2816254 47 - 123690457 ctggtgcagtggctcacgc---ctttaatctc--ag----cacttttggaggctga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2322404 47 - 204787373 cgggtgcaggggctcatgc---ctttaatccc--ag----cacttttggaggctga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192388160 47 - 192460366 cgggtgcagtggctcacgc---ctttaatccc--ag----cacttttggaggctga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19127210 47 - 19675229 cgggtgcaggggctcatgc---ctttaatccc--ag----cactttgggaggctga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16360802 47 - 16847902 cgggtgcagtggctcacgc---ctttaatcac--ag----cacttttggaggctga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91333333 47 + 91754291 tgggtgcagtggctcatgc---ctttaatcac--ag----cacttttggaggctga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1398231 47 + 1977891 cgggtgcagtggctcacgc---ctttaatcac--ag----cacttttggaggctga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7339540 47 - 7796314 cgggtgcaggggctcatgc---ctttaatcac--ag----cacttttgaaggctga i colAng1.NW_012118932v1 C 0 C 0 s canFam3.chr33 2306693 54 - 31377067 cggctt--atcgctcaaccgaattttaatcccctagctcccactctgccaggctga i canFam3.chr33 C 0 I 107 e proCoq1.NW_012133858v1 14780386 378 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370093 501 + 114275543 I e dasNov3.JH569502 2684402 0 - 6579706 C e saiBol1.JH378146 17262204 301 - 17725628 I e calJac3.chr17 73812191 138 + 74750902 I e cebCap1.NW_016107444v1 6350085 843 + 6778120 I e otoGar3.GL873829 190641 515 + 608964 I a score=1416569.000000 s hg38.chr3_KI270934v1_alt 37825 268 + 163458 ggcaagcggatcacaaggtcaggagatcgagaccatcctgaccaacatggtgaaa-ccccatctctactaaaaatacaaaaattagctgggcgtggtggcaggcgcctgtagtcccagctactcgggaggctgcggcaggaaaatcgcttgcacccgggaggtggaggttacagtgagccaagattgcgccattgtactccagcctgggcaacagagtgagactctatgtcaaaaagaaagaaaagaaaagaaaagaaa---------agaaaagaaa s panTro5.chr3 2504516 277 - 202621043 ggcaagcggatcacaaggtcaggagatcaagaccatcctgaccaacatggtggaa-ccccatctctactaaaaatacaaaaattagccgggcgtggtggcaggtgtctgtagtcccagctactcgggaggctgcggcaggaaaatcgcttgcacccgggaggtggaggttacagtgagccgagattgcgccattgtactccagcctgggcaacagagtgagactctatctcaaaaagaaagaaaagaaaagaaaagaaagaaaagaaaagaaaagaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99111 274 - 190779 ggcaagtggatcacaaggtcaggagatcgagaccatcctgaccaacatggtggaa-ccccatctctactaaaaatacaaaaattagccgggcgtggtggcaggtgcctgtagtcccagctactcgggaggctgcggcaggaaaatcgcttgcacccgggaggtggaggttacagtgagccgagattgcgccattgtactccagcctgggcaacagagtgagactctatctcaaaaagaa--gaaaagaaagaaaagaaagaaaagaa-agaaaagaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50404 259 - 106623 ggcaagcggatcacaaggtcaggagatcgagaccatcctgaccaacatggtgaaacccccatctctactaaaaatacaaaaattagctgggcgtggtggcaggtgcctgtagtcccagctactcgggaggctgcggcaggaaaattgcttgcacccgggaggtggaggttacagtgagccaagattgcgccattgtactccagcctgggcaacagagtaagactctatctcaaaaagaa----------agaaaaaaaa---------agaaaagaaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2816301 253 - 123690457 ggaaggcggatcacaaggtcaggagatcgagaccatcctgaccaacatggtgaaa-ccccgtctctactaaaaataccaatattagctgggcgtggtggcgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttacagtgagccaagattgcgccactgcactccagcctgggcaacagagtgagactccatctcaaaaagaa---------------agaaa---------aggaaagaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2322451 257 - 204787373 ggcaggcggatcacaaggtcaggagatcgagaccatcctgaccaacatggtggaa-ccccatctctactaaaaatacaaaaatcagccgggtgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacgcgagaggcagaggttacagtgagccaagattgcgccactgcactccagcctgggcaacagagtgagactccatctcaaagagaa-----------agaatgaaa---------agaaaggaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192388207 257 - 192460366 ggcagacggatcacaaggtcaggagatcgagaccagcctgaccaacatggtggaa-ccccatctctactaaaaatacaaaaatcagccaggtgtggtggcgggcgcctgttgtcccagctacttgggaggctgaggcaggagaatcgcttgaacgcgggaggcggaggttacagtgagccaagattgcgccactgcactccagcctgggcaacagagtgagactccatctcaaaaagaa-----------agaatgaaa---------agaaaggaaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19127257 257 - 19675229 ggcaggcggatcacaaggtcaggagatcgagaccatcctgaccaacatggtggaa-ccccatctctactaaaaatacaaaaatcagccgggtgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacgcgagaggcagaggttacagtgagccaagattgcgccactgcactccagcctgggcaacagagtgagactccatctcaaaaagaa-----------agaatgaaa---------agaaagaaaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16360849 257 - 16847902 ggcaggcggatcacaaggtcaggagatcgagaccatcctgaccaacatggtggaa-ccccatctctactaaaaatacaaaaatcagccgggtgtggtggcgggtgcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacgcgggaggcggaggttacagtgagccaagattgcaccactgcactccggcctgggcaacagagtgacactccatctcaaaaagaa-----------agaatgaaa---------agaaaggaaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91333380 257 + 91754291 ggcaggcggatcacaaggtcaggagatcaagaccatcctgaccaacatggtggaa-ccccatctctactaaaaatacaaaaactagccgggcgtggtggcgggcacctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttatagtgagccaagattgcgccactgcactccagcctgggcaacagagtgagactccatctcaaaaagaa-----------agaatgaaa---------agaaaggaaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1398278 257 + 1977891 ggcaggcggatcacaaggtcaggagatcgagaccatcctgaccaacatggtggaa-ccccatctctactaaaaatacaaaaatcagctgggtgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaatgcgggaggcggaggttacagtgagccaagattgcgccactgcactccggcctgggcaacagagtgagactccatctcaaaaagaa-----------agaatgaaa---------agaaaggaaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7339587 257 - 7796314 ggcaggcggataacaaggtcaggagatcgagaccatcctgaccaacatagtggaa-ccccatctctactaaaaatacaaaaatcagctgggtgtggtggcaggcgcctgtagtcccagatacttgggaggctgaggcaggagaatcgcctgaacccgggaggcagaggttacggtgagccaagattgcgccactgcactccagcctgggcaacagagtgaaactccatctcaaaaagaa-----------agcatgaaa---------agaaaggaaa i colAng1.NW_012118932v1 C 0 I 155 e proCoq1.NW_012133858v1 14780386 378 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370093 501 + 114275543 I e dasNov3.JH569502 2684402 0 - 6579706 C e saiBol1.JH378146 17262204 301 - 17725628 I e calJac3.chr17 73812191 138 + 74750902 I e cebCap1.NW_016107444v1 6350085 843 + 6778120 I e canFam3.chr33 2306747 107 - 31377067 I e otoGar3.GL873829 190641 515 + 608964 I a score=124891.000000 s hg38.chr3_KI270934v1_alt 38093 55 + 163458 gaaagaaggagggaaagaaaggaaaggaa--------agaaaggaa--------------------------------aggaaagaaag--ggaaag s panTro5.chr3 2504793 55 - 202621043 gaaagaaggagggaaagaaaggaaaggaa--------agaaaggaa--------------------------------aggaaagaaaa--ggaaag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99385 54 - 190779 g-aagaaggagggaaagaaaggaaaggaa--------agaaaggaa--------------------------------aggaaagaaaa--ggaaag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50663 41 - 106623 gaaagaaggag--------------ggaa--------agaaaggaa--------------------------------aggaaagaaaa--ggaaag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2816554 41 - 123690457 gaaggaatgaa--------------aaaa--------ggaaaggaa--------------------------------agaaaagtaaa--ggaaag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2322708 77 - 204787373 gaaagaaggaaggaaagaaaggaaaggag--------agacagaaagaaaagaaagaaagagaaag------------aaggaaggaaggaaggaag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192388464 78 - 192460366 gaaagaaggaaggaaagaaaggaaaggag--------agacagacagaaagaaaagaaagaaagaaa-----------aaaagagagagaaagaaag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19127514 89 - 19675229 gaaagaaggaaggaaaaaaaggaaaggag--------agacagaaagaaaagaaagaaagagaaagaaggaaggaaggaaggaaggaaggaaggaag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16361106 86 - 16847902 gaaagaaggaaggaaagaaaggaaaggagagacagacagaaagaaaagaaagaaagagaaagaaaga-----------aagaaaggaaggaaggaag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91333637 73 + 91754291 gaaagaaggaaggaaagaaaggaaaagag--------agacagacagacagac---agacagaaaga-----------aagaaagaaag--aagaaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1398535 67 + 1977891 gaaagaaggaaggaaagaaaggaaaggag--------agacagacagaaaga--------aaagaaa-----------gagaaagaaa---aggaag i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14780386 378 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370093 501 + 114275543 I e dasNov3.JH569502 2684402 0 - 6579706 C e saiBol1.JH378146 17262204 301 - 17725628 I e calJac3.chr17 73812191 138 + 74750902 I e cebCap1.NW_016107444v1 6350085 843 + 6778120 I e canFam3.chr33 2306747 107 - 31377067 I e otoGar3.GL873829 190641 515 + 608964 I e colAng1.NW_012118932v1 7339844 155 - 7796314 I a score=61983.000000 s hg38.chr3_KI270934v1_alt 38148 17 + 163458 gagaaaaagaaagaaag s panTro5.chr3 2504848 17 - 202621043 gagaaaaagaaagaaag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99439 17 - 190779 gagaaaaagaaagaaag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50704 14 - 106623 gagaaa---aaagaaag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2816595 17 - 123690457 gagaaaaagagagaaag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2322785 17 - 204787373 gaaggaaggaaagagaa i rheMac8.chr2 C 0 I 36 s macFas5.chr2 192388542 17 - 192460366 aaagaaaagaaataaag i macFas5.chr2 C 0 I 34 s macNem1.NW_012014355v1 19127603 17 - 19675229 gaaggaaggaaggaaag i macNem1.NW_012014355v1 C 0 I 32 s cerAty1.NW_012004056v1 16361192 17 - 16847902 gaaagaaagaaagagaa i cerAty1.NW_012004056v1 C 0 I 40 s chlSab2.chr15 91333710 17 + 91754291 gaaagaaggaaggaaag i chlSab2.chr15 C 0 I 44 s manLeu1.NW_012102020v1 1398602 17 + 1977891 gaaggaaagaaagaaag i manLeu1.NW_012102020v1 C 0 I 30 s canFam3.chr33 2306854 17 - 31377067 GAGACAGAGAGAGAGGG i canFam3.chr33 I 107 C 0 e proCoq1.NW_012133858v1 14780386 378 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370093 501 + 114275543 I e dasNov3.JH569502 2684402 0 - 6579706 C e saiBol1.JH378146 17262204 301 - 17725628 I e calJac3.chr17 73812191 138 + 74750902 I e cebCap1.NW_016107444v1 6350085 843 + 6778120 I e otoGar3.GL873829 190641 515 + 608964 I e colAng1.NW_012118932v1 7339844 155 - 7796314 I a score=11839.000000 s hg38.chr3_KI270934v1_alt 38165 14 + 163458 aaagaaacta------------------------------------tatt s panTro5.chr3 2504865 48 - 202621043 aaagaaagaaagaaagaaagaaagaaagaaagaaagaaa--gaaaatatt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99456 18 - 190779 aaagaaagaa--------------------------------actatatt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50718 14 - 106623 aaagaaacta------------------------------------tatt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2816612 38 - 123690457 aaagaatgaa------------tgaatgaaagaaagaaactaactttatt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2322838 14 - 204787373 aaagaaactt------------------------------------tatt i rheMac8.chr2 I 36 C 0 s macFas5.chr2 192388593 14 - 192460366 aaagaaactt------------------------------------tatt i macFas5.chr2 I 34 C 0 s macNem1.NW_012014355v1 19127652 14 - 19675229 aaagaaactt------------------------------------tatt i macNem1.NW_012014355v1 I 32 C 0 s cerAty1.NW_012004056v1 16361249 14 - 16847902 aaagaaactt------------------------------------tatt i cerAty1.NW_012004056v1 I 40 C 0 s manLeu1.NW_012102020v1 1398649 14 + 1977891 aaagaaactt------------------------------------tatt i manLeu1.NW_012102020v1 I 30 C 0 s canFam3.chr33 2306871 14 - 31377067 AGAGAGGGTG------------------------------------CACG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14780386 378 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370093 501 + 114275543 I e dasNov3.JH569502 2684402 0 - 6579706 C e saiBol1.JH378146 17262204 301 - 17725628 I e calJac3.chr17 73812191 138 + 74750902 I e cebCap1.NW_016107444v1 6350085 843 + 6778120 I e otoGar3.GL873829 190641 515 + 608964 I e colAng1.NW_012118932v1 7339844 155 - 7796314 I e chlSab2.chr15 91333727 44 + 91754291 I a score=45464.000000 s hg38.chr3_KI270934v1_alt 38179 19 + 163458 -----ggagaaaaagaagg----acgaa s panTro5.chr3 2504913 19 - 202621043 -----ggagaaaaagaagg----acgaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99474 19 - 190779 -----ggagaaaaagaagg----acgaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50732 19 - 106623 -----ggagaaaaagaagg----atgaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2816650 12 - 123690457 -----ggagaaaaa-----------gga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2322852 19 - 204787373 -----ggagaaaaagaaag----aagaa i rheMac8.chr2 C 0 I 58 s macFas5.chr2 192388607 23 - 192460366 -----ggagaaaaagaaagaagaaagaa i macFas5.chr2 C 0 I 60 s macNem1.NW_012014355v1 19127666 19 - 19675229 -----ggagaaaaagaaag----aagaa i macNem1.NW_012014355v1 C 0 I 58 s cerAty1.NW_012004056v1 16361263 15 - 16847902 -----ggagaaaaag--------aagaa i cerAty1.NW_012004056v1 C 0 I 66 s chlSab2.chr15 91333771 19 + 91754291 -----agagagaaagaaag----aaaag i chlSab2.chr15 I 44 I 3 s manLeu1.NW_012102020v1 1398663 19 + 1977891 -----ggagaaaaagaaag----aagaa i manLeu1.NW_012102020v1 C 0 I 64 s canFam3.chr33 2306885 19 - 31377067 CGTGTCgagggggtgcgtg--------- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14780386 378 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370093 501 + 114275543 I e dasNov3.JH569502 2684402 0 - 6579706 C e saiBol1.JH378146 17262204 301 - 17725628 I e calJac3.chr17 73812191 138 + 74750902 I e cebCap1.NW_016107444v1 6350085 843 + 6778120 I e otoGar3.GL873829 190641 515 + 608964 I e colAng1.NW_012118932v1 7339844 155 - 7796314 I a score=113337.000000 s hg38.chr3_KI270934v1_alt 38198 37 + 163458 ----agaaaga--------aaaaggaaggaaggaaggaaagaggaaaga s panTro5.chr3 2504932 37 - 202621043 ----agaaaga--------aacaggaaggaaggaaggaaagaggaaaga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99493 37 - 190779 ----agaaaga--------aacaggaaggaaggaaggaaagaggaaaga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50751 33 - 106623 ----agaaaga--------aa----aaggaaggaaggaaagaggaaaga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2816662 30 - 123690457 ----agaaag---------------aaggaaggaaggaaagaggaaaga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2322929 32 - 204787373 ----agaaaga--------a-----aagaaaagaaagagaaagaaagaa i rheMac8.chr2 I 58 C 0 s macFas5.chr2 192388690 32 - 192460366 ----agaaaga--------a-----aagaaaagaaagaaagagaaagaa i macFas5.chr2 I 60 C 0 s macNem1.NW_012014355v1 19127743 32 - 19675229 ----agaaaga--------a-----aagaaaagaaagagaaagaaagaa i macNem1.NW_012014355v1 I 58 C 0 s cerAty1.NW_012004056v1 16361344 40 - 16847902 ----agaaagaaagaaaaga-----aaagaaagaaagagaaagaaagaa i cerAty1.NW_012004056v1 I 66 C 0 s chlSab2.chr15 91333793 32 + 91754291 ----agaaaag--------a-----aaagaaagaaagagaaagaaagaa i chlSab2.chr15 I 3 C 0 s manLeu1.NW_012102020v1 1398746 32 + 1977891 ----agaaaga--------a-----aagaaaagaaagaaagagaaagaa i manLeu1.NW_012102020v1 I 64 C 0 s colAng1.NW_012118932v1 7339999 27 - 7796314 ----agaaaga--------a-----agaaaaa-----agaaagaaagaa i colAng1.NW_012118932v1 I 155 C 0 s canFam3.chr33 2306904 35 - 31377067 cacaagcaggg--------g-----gaggaacagaggagggggaaaga- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14780386 378 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370093 501 + 114275543 I e dasNov3.JH569502 2684402 0 - 6579706 C e saiBol1.JH378146 17262204 301 - 17725628 I e calJac3.chr17 73812191 138 + 74750902 I e cebCap1.NW_016107444v1 6350085 843 + 6778120 I e otoGar3.GL873829 190641 515 + 608964 I a score=-16895.000000 s hg38.chr3_KI270934v1_alt 38235 6 + 163458 aCctta s panTro5.chr3 2504969 6 - 202621043 aCcttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99530 6 - 190779 accttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50784 6 - 106623 aCcttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2816692 2 - 123690457 aC---- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2322961 1 - 204787373 a----- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192388722 1 - 192460366 a----- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19127775 1 - 19675229 a----- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16361384 1 - 16847902 a----- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91333825 1 + 91754291 a----- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1398778 1 + 1977891 a----- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7340026 1 - 7796314 a----- i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17262505 6 - 17725628 atcttt i saiBol1.JH378146 I 301 C 0 s canFam3.chr33 2306939 6 - 31377067 atctca i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14780386 378 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370093 501 + 114275543 I e dasNov3.JH569502 2684402 0 - 6579706 C e calJac3.chr17 73812191 138 + 74750902 I e cebCap1.NW_016107444v1 6350085 843 + 6778120 I e otoGar3.GL873829 190641 515 + 608964 I a score=290017.000000 s hg38.chr3_KI270934v1_alt 38241 43 + 163458 ctttattgcttat---------agttcaactggatttttatctcccacctcc s panTro5.chr3 2504975 43 - 202621043 ctttattgcttat---------agttcaactggatttttatctcccacctcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99536 43 - 190779 ctttattgcttat---------agttcaactggatttttatctctcacctcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50790 43 - 106623 ctttattccttat---------agttcaactggatttttatctcccacctcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2816694 43 - 123690457 ctttattgcttat---------agttcaactggatttttatctcccacctcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2322962 43 - 204787373 cttgatcgcttat---------agttcaactggacttttctctcccacctcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192388723 43 - 192460366 cttgattgcttat---------agttcaaccggacttttctctcccacctcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19127776 43 - 19675229 cttgattgcttat---------agttcaactggacttttctctcccacctcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16361385 43 - 16847902 cttgattgcttat---------agttcaaccggacttttctctcccacttcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91333826 43 + 91754291 cttgattgcttac---------agttcaaccggacttttctctcccccctcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1398779 43 + 1977891 cttgattgcttat---------agttcaactggacttttctctcccacctcc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7340027 43 - 7796314 cttgattgcttat---------agttcaaccggatttttctctcccacctcc i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17262511 43 - 17725628 ctttattgctcat---------agttgaactgaatgtttatctcccacctcc i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 2306945 52 - 31377067 acagactcctcactgagcaGCAAgcccaatgggggctccagctcacgaccct i canFam3.chr33 C 0 I 85 s dasNov3.JH569502 2684402 43 - 6579706 cttccttgtgtct---------agctcaaccaaatttttatctccaagttcc i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14780386 378 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370093 501 + 114275543 I e calJac3.chr17 73812191 138 + 74750902 I e cebCap1.NW_016107444v1 6350085 843 + 6778120 I e otoGar3.GL873829 190641 515 + 608964 I a score=620454.000000 s hg38.chr3_KI270934v1_alt 38284 88 + 163458 ccttctgccaggttggcaggaaacttccacctccgtctttctcacagcgcc----------------ccacagctctgcg-gcgaagcccagcagagggccctgc s panTro5.chr3 2505018 88 - 202621043 ccttctgccaggttggcaggaaacttccacctccgtctttctcacagcgcc----------------ccacagctctgcg-gcgaagcccagcagagggccctgc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99579 88 - 190779 ccttctgccaggttggcaggaaacttccacctccgtctttctcacagcgcc----------------ccacagctctgcg-gcgaagcccagcagagggccctgc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50833 88 - 106623 ccttctgccaggttggcaggaaacttccacctccgtctttctcacagcgcc----------------ccatagctctgcg-gcgaagcccagcagagggccctgc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2816737 103 - 123690457 ccttctgccaggttggcaggaaacttccacctcagtctttctcacagtgcc-cagtggttcccagttccacagctctgcg-gcaaagcccagcagagggccctgc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2323005 102 - 204787373 cc-tctgccaggttggcaggaagcctccacctcagtctttctcacagtgcc-caatggtttccagttccacagctctgtg-gcaaagctcagcagagggccctgc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192388766 102 - 192460366 cc-tctgccaggttggcaggaagcctccacctcagtctttctcacagtgcc-caatggtttccagttccacagctctgtg-gcaaagctcagcagagggccctgc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19127819 102 - 19675229 cc-tctgccaggttggcaggaagcctccacctcagtctttctcacagtgcc-caatggtttccagttccacagctctgtg-gcaaagctcagcagagggccctgc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16361428 102 - 16847902 cc-tctgccaggttggcaggaagcctccacctcagtctttctcacagtgcc-cagtggttcccagttccacagctctgtg-gcaaagctcagcagagggccctgc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91333869 102 + 91754291 cc-tctgccaggttggcaggaagcctccacctcagtctttctcacagtgcc-cagtggttcccagttccacagctctgtg-gcaaagctcagcagagggccctgc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1398822 102 + 1977891 cc-tctgccaggttggcaggaagcctccacctcagtctttctcacagtgcc-caatggttcccagttccacagctctgtg-gcaaagctcagcagagggccctgc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7340070 102 - 7796314 cc-tctgccaggttggcaggaggcttccacctcagtctttctcacagtgcc-cagtggttcccagttccacagctctgtg-gcaaagctcagcagagggccctgc i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17262554 103 - 17725628 cattctgctaggttggcaggaaacttccacctccatctttctcacagtgcc-cagtggttcccagttccacagttctgcg-gccaagcccagcagagcgccctga i saiBol1.JH378146 C 0 C 0 s dasNov3.JH569502 2684445 91 - 6579706 cattgggttgggctggcaggaaacttctacctcagcctctcttagagttccccagcgattcccagttcc--agttttatgtgcaaaacattga------------ i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14780386 378 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370093 501 + 114275543 I e calJac3.chr17 73812191 138 + 74750902 I e cebCap1.NW_016107444v1 6350085 843 + 6778120 I e canFam3.chr33 2306997 85 - 31377067 I e otoGar3.GL873829 190641 515 + 608964 I a score=653173.000000 s hg38.chr3_KI270934v1_alt 38372 90 + 163458 ggtgtggggt-ggaaggtggttgt-gggtccctgggcgtgagtccacacaggtttccatcaca-gctccgcc------ccacttccccttcagacccag s panTro5.chr3 2505106 90 - 202621043 ggtgtggggt-ggaaggtggtcgt-gggtccctgggcgtgagtccacacaggtttccatcaca-gctccgcc------ccacttccccttcagacccag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99667 90 - 190779 ggtgtggggt-ggaaggtggtcgt-gggtccctgggcgtgagtccacacaggtttccatcaca-ggtccgcc------ccacttccccttcagacccag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50921 89 - 106623 ggtgtggggt-ggaaggtggtcgt-gggtccctgggtgtgagtccacacaggtttccatcaca-gctccgcc------ccacttccccttcagaccga- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2816840 90 - 123690457 ggtgtggggc-ggaaggtggtcatggggtccctgggcctgagtccacacaggtttccatcaca-gctctgcc------ccacttcccc-tcagacccag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2323107 91 - 204787373 ggtgtggggt-ggaaggtggtcatggggtccctgggcatgagtccacacaggtttccatccca-gctctgcc------ccacttccccttcagacccag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192388868 91 - 192460366 ggtgtggggt-ggaaggtggtcatggggtccctgggcatgagtccacacaggtttccatccca-gctctgcc------ccacttccccttcagacccag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19127921 91 - 19675229 ggtgtggggt-ggaaggtggtcatggggtccctgggcatgagtccacacaggtttccatccca-gctctgcc------ccacttccccttcagacccag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16361530 91 - 16847902 ggtgtggggt-agaaggtggtcatggggtccctgggcatgagtccacacaggtttccatccca-gctctgcc------ccacttccccttcagacccag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91333971 91 + 91754291 ggtgtggggt-ggaaggtggtcgtggggtccctgggcatgagtccacacaggttcccatcgca-gctctgcc------ccactttcccttcagacccag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1398924 91 + 1977891 ggtgtggggt-ggaaggtggtcatggggtccctgggcatgagtccacacaggtttccatccca-gctctgcc------ccacttcagcttcagacccag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7340172 91 - 7796314 ggtgtggggt-ggaaggtggtcatggggtccctgggcatgagtccacacaggtttccttcaca-gctctgcc------ccacttccccttcagacccag i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17262657 95 - 17725628 ggtgtgaggt-gggaggtgggcat-gggtccctgggcatgagtccaca-aggtttccatcaca-gctctgccctccctccgtctccccttcagacccag i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 2307082 84 - 31377067 GGTgggggag-ggaggcc--tcctgtggtccctgggcacgtgcctacacag------ctcacaggcgccgtg------ctccctcctcttcaggcccag i canFam3.chr33 I 85 C 0 s dasNov3.JH569502 2684536 92 - 6579706 ggtatcaggcaggaaggtgccccagtggtccctgggcatgagtctacccaggtttctaccacctgctctgtc------ct-cccagccttcaggcctag i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14780386 378 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370093 501 + 114275543 I e calJac3.chr17 73812191 138 + 74750902 I e cebCap1.NW_016107444v1 6350085 843 + 6778120 I e otoGar3.GL873829 190641 515 + 608964 I a score=910747.000000 s hg38.chr3_KI270934v1_alt 38462 110 + 163458 ggagaggctctgctgcttctgtgccttgctcagacacaggacaccttttct--gaggccgcttacagtcctgtctgcctagaagcaccccacagtcatttctccctaggatg s panTro5.chr3 2505196 109 - 202621043 ggagaggctctgctgcttctgtgccttgctcagacacaggacaccttttct--gaggccgcttacagtcccgtctgcctagaagcaccc-acagccatttctccctaggatg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99757 109 - 190779 ggagaggctctgctgcttctgtgccttgctcagacacaggacaccttttct--gaggccgcttacagtcccgtctgcctagaagcaccc-acagccatttctccctaggatg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51010 110 - 106623 ggagaggctctgctgcttctgtgccttgctcagacacaggacaccttttct--gaggccgcttacagtcccgtctgcctagaagcaccccacagccatttctccctaggatg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2816930 110 - 123690457 ggagaggctctgctgcttctgtgccttgctcagacaaaggacaccttttct--gaggccgcttacagtcccgtctgcctagaagcaccccacagccgtttctccctgggatg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2323198 110 - 204787373 ggagaggctctgctgcttctgtgccttgctcagacataggacaccttttac--gaggccgcttatggtcctgtctgcctagaagcaccccacagccatttctccctaggatg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192388959 110 - 192460366 ggagaggctctgctgcttctgtgccttgctcagacataggacaccttttac--gaggccacttacggtcctgtctgcctagaagcaccccacagccatttctccctaggatg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19128012 110 - 19675229 ggagaggctctgctgcttctgtgccttgctcagacataggacaccttttac--gaggccgcttatggtcctgtctgcctagaagcaccccacagccatttctccctaggatg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16361621 110 - 16847902 ggagaggctctgctgcttctgtgccttgctcagacataggacaccttttac--gaggccgcttacggtcctggctgcctagaagcaccccacagccatttctccctaggatg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91334062 110 + 91754291 ggagaggctctgctgcttctgtgccttgctcagacacaggacaccttttac--gaggccgcttacggtcctgtctgcctagaagcaccccacagccatttctccctaggatg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1399015 110 + 1977891 ggagaggctctgctgcttctgtgccttgctcagacacaggacaccttttac--gaggccgcttatggtcctgtctgcctagaagcaccctacagccatttctccctaggatg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7340263 110 - 7796314 ggagaggctctgctgcttctgtgccttactcagacacaggacaccttttac--aaggctgcttacggtcctgtctgcctagaagcaccccacagccatttctgcctaggatg i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17262752 107 - 17725628 ggagatgctttgcc-cttctgcgccttgctcagacacaggaaaccatttac--gaggccgctcgtggtcccgtctgcctagaagcccctcacag-catttctccct-ggata i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 14780764 109 - 22200726 ggagaggccctgctgcttctgtgccttgctcagacccaggaaacctttcgt--gaggctacttgtggtccca-ctgcctacaggcaccacagagccatttctctctggggtc i proCoq1.NW_012133858v1 I 378 C 0 s canFam3.chr33 2307166 109 - 31377067 ggaggtgctccatggcttcggtgctttgctcagacacggggcaccttttat--aaggcgcccta-ggctgcgtctgcctacaagcaccacacgcctatttctctctgggctc i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2684628 87 - 6579706 ggagtctctctgtcgcttcttggccttactcagacacaggcaaccttttataaaaggctaatt-cagtcctatctgcctagaATGTTC------------------------ i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370093 501 + 114275543 I e calJac3.chr17 73812191 138 + 74750902 I e cebCap1.NW_016107444v1 6350085 843 + 6778120 I e otoGar3.GL873829 190641 515 + 608964 I a score=217924.000000 s hg38.chr3_KI270934v1_alt 38572 20 + 163458 tcatcatcacggtgctggga s panTro5.chr3 2505305 20 - 202621043 tcatcatcacggtgctggga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99866 20 - 190779 tcatcatcacggtgctggga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51120 20 - 106623 tcatcatcacggtgctggga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2817040 17 - 123690457 ---ccatcacggtgctgggg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2323308 20 - 204787373 tcatcatcacggtgctggga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192389069 20 - 192460366 tcatcatcacggtgctggga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19128122 20 - 19675229 tcatcatcacggtgctggga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16361731 20 - 16847902 tcatcatcacggtgctggga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91334172 20 + 91754291 tcatcatcacggtgctggga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1399125 20 + 1977891 tcatcatcacggtgctggga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7340373 20 - 7796314 tcatcatcacggtgctggga i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17262859 20 - 17725628 ccatcatcgcggtgctgggg i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 88370594 20 + 114275543 tcatcatcacggtgttggga i micMur3.chr1 I 501 C 0 s proCoq1.NW_012133858v1 14780873 20 - 22200726 tcatcatcacggtgttggga i proCoq1.NW_012133858v1 C 0 I 10 s canFam3.chr33 2307275 20 - 31377067 tcctcgttgtggcgttggga i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2684715 20 - 6579706 TCATCATCATGGTGTCAGAA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32775052 468 + 98207768 I e calJac3.chr17 73812191 138 + 74750902 I e cebCap1.NW_016107444v1 6350085 843 + 6778120 I e otoGar3.GL873829 190641 515 + 608964 I a score=119051.000000 s hg38.chr3_KI270934v1_alt 38592 17 + 163458 agagagctgcgggt-ccc- s panTro5.chr3 2505325 17 - 202621043 aaagagctgcgggt-gcc- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99886 17 - 190779 agagagctgcgggt-gcc- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51140 17 - 106623 agagagctgcgggt-ccc- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2817057 17 - 123690457 agagagctgtgggt-ccc- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2323328 17 - 204787373 agagagctgctggt-cgc- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192389089 17 - 192460366 agagagctgctggt-cgc- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19128142 17 - 19675229 agagagctgctggt-cgc- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16361751 17 - 16847902 agagagctgctggt-cgc- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91334192 17 + 91754291 agagagctgctggt-ggc- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1399145 17 + 1977891 agagagctgctggt-cgc- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7340393 17 - 7796314 agagagctgctggt-cgc- i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17262879 18 - 17725628 agagagctgcgggtcccc- i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 88370614 17 + 114275543 agagaggtgcaggt-ccc- i micMur3.chr1 C 0 I 1 s canFam3.chr33 2307295 17 - 31377067 agaggggtgtaggt-ccc- i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 2684735 18 - 6579706 TAAGATGTGCAGGG-CCCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14780893 10 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e calJac3.chr17 73812191 138 + 74750902 I e cebCap1.NW_016107444v1 6350085 843 + 6778120 I e otoGar3.GL873829 190641 515 + 608964 I a score=396438.000000 s hg38.chr3_KI270934v1_alt 38609 43 + 163458 -tctatcttgacacctcc-aagcccctttg-ctttctcttttacta s panTro5.chr3 2505342 43 - 202621043 -tctatcttgacacctcc-aagcccctttg-ctttctcttttacta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99903 43 - 190779 -tctatcttgacacctcc-aagcccctttg-ctttctcttttacta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51157 43 - 106623 -tctatcttgacacctcc-aagcccctttg-ctttctcttttactg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2817074 43 - 123690457 -tctatcttgacacctcc-aagcccctttg-ctttctcctttacta i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2323345 43 - 204787373 -tctatcttgacacctcc-aagcccctttg-ctttctcttttactc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192389106 43 - 192460366 -tctatcttgacacctcc-aagcccctttg-ctttctcttttactc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19128159 43 - 19675229 -tctatcttgacacctcc-aagcccctttg-ctttctcttttactc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16361768 43 - 16847902 -tctatcttgacacctcc-aagcccctttg-ctttctcttttactc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91334209 43 + 91754291 -cctatcttgacacctcc-gagcccctttg-ctttctcttttactc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1399162 43 + 1977891 -tctatcttgacacctcc-aagcccctttg-ctttctcttttactc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7340410 43 - 7796314 -tctatcttgacacctcc-aagcccctttg-ctttctcttttacta i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17262897 43 - 17725628 -tctctcctggcagctcc-aagcccctttg-ctttttctttcactc i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 88370632 42 + 114275543 -tttatcttgacacccc--aaaccccttta-ttttctcttttaccc i micMur3.chr1 I 1 C 0 s proCoq1.NW_012133858v1 14780903 44 - 22200726 -tctatcttgacacccccaaaaccccttta-ttttctctgttactc i proCoq1.NW_012133858v1 I 10 C 0 s canFam3.chr33 2307314 44 - 31377067 -atgatgttgacgcccct-acaccccttcgtttttctcttctactg i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 2684753 43 - 6579706 TCTGAGCTTGGGACCCCA-AGGCTCCTTTA-TCCTGTCTTTCCTC- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32775052 468 + 98207768 I e calJac3.chr17 73812191 138 + 74750902 I e cebCap1.NW_016107444v1 6350085 843 + 6778120 I e otoGar3.GL873829 190641 515 + 608964 I a score=1059241.000000 s hg38.chr3_KI270934v1_alt 38652 102 + 163458 tctccttccagctaaaagaaacatct-t--ttccagtttggagaaactacttctccat----gt---ttctagccaagata-cttGGCCTAATTCCACGACTCTTGTCCTATC s panTro5.chr3 2505385 102 - 202621043 tctccttccagctaaaagaaacatct-t--ttccagtttggagaaactacttctccat----gt---ttctagccaagata-cttGGCCTAATTCCACGACTCTTGCCCTATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99946 102 - 190779 tctccttccagctaaaagaaacatct-t--ttccagtttggagaaactacttctccat----gt---ttctagccaagata-cttGGCCTAATTCCACGACTCTTGTCCTATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51200 102 - 106623 tctccttccagctaaaagaaacatct-t--ttccagtttggagaaactacttctccat----gt---ttctagccaagata-cttGGCCTAATTCCACGACTCTTGACCTATC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2817117 102 - 123690457 tctccttccagctaaaagaaacatct-t--ttccagtttggagaaattacttctgcat----gt---ttctagccaagata-cttggcctaattccacaactcttgtcctatc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2323388 102 - 204787373 tctccctctggctaaaagaaacatct-t--tttcagtttggagaaattacttctccat----gt---ttctagccaagata-tttggcctaattccacaactcttgtcctatg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192389149 102 - 192460366 tctccctctggctaaaagaaacatct-t--ttccagtttggagaaattacttctccat----gt---ttctagccaagata-tttggcctaattccacaactcttgtcctatg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19128202 102 - 19675229 tctccctctggctaaaagaaacatct-t--tttcagtttggagaaattacttctccat----gt---ttctagccaagata-cttGGCCTAATTCCACGACTCTTGTCCTATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16361811 102 - 16847902 tctccctctggctaaaagaaacatct-t--tttcagtttggagaaattacttctccat----gt---gtctagccaagata-cttggcttaattccacgactcttgtcctatc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91334252 102 + 91754291 tctccctctggctaaaagaaacatct-t--tttcagtttggagaaattacttctccat----gt---ttctagccaagata-cttGGCCTAATTCCACGACTCTTGTCCTATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1399205 102 + 1977891 tctccctctggctaaaagaaacatct-t--tttcagtttggagaaattacttctccat----gt---ttctagccaagata-cttGGCCTAATTCCACGACTCTTGTCCTATC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7340453 102 - 7796314 tctccctccaactaaaagaaacatct-t--ttccagtttggagaaactacttctgcat----gt---ttctagccaagata-cttagcctaattccacgactcttgtcctatc i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17262940 102 - 17725628 tctcctttcagctaaaagaaacatct-t--ttccagtttggagacattacttttccat----gt---ttccagccaagata-cttggcctcattccgcaactcttgtcctatc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6350928 102 + 6778120 TCTCCTTCCAGCTAAAAGAAACATCT-T--TTCCAGTTTGGAGACATGACTTTTCCAT----GT---TTCTAGCCAAGATC-CTCGGCCTCATTCCACAACTCTTGTCCTGTC i cebCap1.NW_016107444v1 I 843 C 0 s micMur3.chr1 88370674 106 + 114275543 tctccctccagctaaaagtaacatctct--tttcagtttggagaagttgcttctgcattccagt---ttc-agccaaaata-cttGGCCTAAATCCATGACTCTTGTCCTGTC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14780947 105 - 22200726 tctccctccagctaaaagtaacatctct--tttcagtttggagaagttgcttctgcattcaagt---ttc-agccaagata-ctt-GCCTAAATCCATGACTCTTGTCCCATC i proCoq1.NW_012133858v1 C 0 C 0 s canFam3.chr33 2307358 105 - 31377067 tctccttccagctaaaagaaggatct-t--tt-cattttagagaCTATCTTGGTGCAT----GCCGGTTCTAACCACGACAGTTTGGCCTTAGTCTATCCATCCTGCCCCATT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2684796 99 - 6579706 TTTCCCTCCAGCTAAAAGTGGCATCT-CTGTTTCTATTTAGAGGAAATTCTTCTCCATTTGAGT---TTCTAACCAAGTCA-CTTGCCCGCCCCCCCCCCCCCC--------- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32775052 468 + 98207768 I e calJac3.chr17 73812191 138 + 74750902 I e otoGar3.GL873829 190641 515 + 608964 I a score=1615498.000000 s hg38.chr3_KI270934v1_alt 38754 180 + 163458 TGCTTTTTTA------------TTTTTATTTTTGGTTGTAAAGGAAGAGCCAGAAAGGAAAGTGTTTATCTGGCAACACAAAACTACCTCCTTcaccac-------------tt--acacaca----------------------cacgcatgca--cacgc--acac-acagacac------------------------------acacacaca---TCCTTCTGAAGCATGAGCAG---AGAATGGGTACTCGAAAGGGATAGAGGT s panTro5.chr3 2505487 182 - 202621043 TGCTTTTTTA------------TTTTTATTTTTGGTTGTAAAGGAAGAGCCAGAAAGGAAAGTGTTTATCTGGCAACACAAAACTACCTCCTTcaccac-------------tt--acacaca----------------------catgcatgca--cacgc--acac-acagacac------------------------------acacacaca-caTCCTTCTGAAGCATGAGCAG---AGAATGGGTACTTGAAAGGGATAGAGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100048 182 - 190779 TGCTTTTTTA------------TTTTTATTTTTGGTTGTAAAGGAAGAGCCAGAAAGGAAAGTGTTTATCTGGCAACACAAAACTACCTCCTTCACCAC-------------TT--ACACACA----------------------CATGCATGca--cacac--acac-acacacac------------------------------acacacaca-caTCCTTCTGAAGCATGAGCAG---AGAATGGGTACTTGAAGGGGATAGAGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51302 180 - 106623 TGCTTTTTTA------------TTTTTATTTTTGGTTGTAAAGGAAGAGCCAGAAAGGAAAGTGTTTATCTGGCAACACAAAACTACCTCCTTcaccac-------------tt--acacaca----------------------cacgcatgca--cacgc--acac-acagacac------------------------------acacacaca---TCCTTCTGAAGCATGAGCAG---AGAATGGGTACTTGAAAGGGATAGAGGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2817219 184 - 123690457 tgctttttta------------tttttatttttggttgtaaaagaagagccagaaagGAAAGTGTTTATCTGGCAACACAAAACTACCTCCCTCACCAC-------------TT--acacaca----------------------cacacacaca--cacacagacac-acacacac------------------------------acagacaca-caTCCTTCTGAAACATGAGCAG---AGAATGGGTACTTGAAAGGGATAGAGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2323490 187 - 204787373 tgctttttaa------------tttttatttttggttgtaaaggaagagcca-----gaaagTGTTTATCTGGCAACACAAAACCACCTCCTTCACCCT-------------Tt--acacacacacacgcaca------------cacacatgca--cacgc--acac-agacacat------------------------------acacataca-catCCTTCTGAAGCATGAGCAG---AGAATGGGGACTTGAAAGGGATAGAGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192389251 189 - 192460366 tgctttttaa------------tttttatttttggttgtaaaggaagagcca-----gaaagTGTTTATCTGGCAACACAAAACCACCTCCTTCACCCT-------------TT--acacacacacacatgcaca----------cacacatgca--cacac--acac-agacacat------------------------------acacataca-caTCCTTCTGAAGCATGAGCAG---AGAATGGGGACTTGAAAGGGATAGAGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19128304 199 - 19675229 TGCTTTTTAA------------TTTTTATTTTTGGTTGTAAAGGAAGAGCCA-----GAAAGTGTTTATCTGGCAACACAAAACCACCTCCTTCACCCT-------------TT--acacacacacacacacgcacacacacatgcacacatgca--cacac--acac-agacacat------------------------------acacataca-caTCCTTCTGAAGCATGAGCAG---AGAATGGGGACTTGAAAGGGATAGAGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16361913 195 - 16847902 tgctttttaa------------tttttatttttggttgtaaaggaagagcca-----gaaagTGTTTATCTGGCAACACAAAACCACCTCCTTCACCCT-------------TT--acacacacacacacgcacacacacatg--cacacatgca--cacac--acac---acacat------------------------------acacataca-caTCCTTCTGAAGCATGAGCAG---AGAATGGGGACTTGAAAGGGGTAGAGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91334354 233 + 91754291 TGCTTTTTAA------------TTTTTATTTTTGGTTGTAAAGGAAGAGCCA-----GAAAGTGTTTATCGGGCAACACAAAACTGCTTCCTTCACCCC-------------TTGcacacacacacacgcacacacgcacacacgcacacacacatgcacac--acac-atgcacatacacgcacacgcacacacgtgcacacacagacacataca-caTCCTTCTGAAGCATGAGCAG---AGAATGGGAACTTGAAAGGGATAGAGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1399307 201 + 1977891 TGCTTTTTAA------------TTTTTATTTTTGGTTGTAAAGGAAGAGCCA-----GAAAGTGTTTATCTGGCAACACAAAACCACCTCCTTCACCCT-------------TT--acacacacacacgcacacacacacacatgcacacatgcacacacac--acac-agacacat------------------------------acacataca-caTCCCTCTGAAGCATGAGCAG---AGAATGGGAACTTGAAAGGGATAGAGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7340555 187 - 7796314 tgctttttaa------------tttttagttttggttgtaaaggaagagcca-----gaaagTGTTTATCTGGCAACACAAAACTACCTCCTTCACCCC-------------TT--acacacacacacacaca------------cacacatgca--cacac--atgc-acacacag------------------------------acacataca-caTCCTTCTGAAGCATGAGCAG---AGAATGGGGACTTGAAAGGGATAGAGGT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17263042 160 - 17725628 tgcgttttta------------tttttgtttttggttgtaaagaaagagccagaaagGAAAGTGTTTATCTGGCAACAC-AAGCCACCTCCTTCACCCC-------------TT--ACACACA----------------------CACACACACA------------------CCCT------------------------------ACCC---------CCTTCTGAAGCATGAGCAG---AGAATGAGCACTTGAAAGGGATAGAGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6351030 173 + 6778120 TGCTTTTTCA------------TTTTTCTTTTTGGTTGTAAAGAAAGAGCCAGAAAGGAAAGTGTTTATCTGGCAACAC-AAACCACCTCCTTCACCCC-------------TT--acacaca----------------------cacacacaca--cacac--acac-acacCCCT------------------------------ACCC---------CCTTCTGAAGCATGAGCAG---AGAATGAGCACTTGAAAGGGATGGAGGT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88370780 190 + 114275543 TGCTTTTT-A------------TT-----TTTTGGTTGTAAAGGAGGAGCCAAAACGGAAAGTGTTTGTCTGGCAACACACAACCCCCTCCTTTGCCCCCCAACATGGGCACTT--ACACACA----------------------GGcacacaca--cacaa--acac-acacacac------------------------------acacatacacCCTTCTCCTGAAGCATGAGCAG---GGAATTGGTACTTGAAAGGGACAGAGGT i micMur3.chr1 C 0 I 244 s proCoq1.NW_012133858v1 14781052 159 - 22200726 TGCTTTTT-A------------TT-----TTTTGATTGTAAAGGAGGAGCCAGAAAGGAAAGTGTTTGTCTGGCAACACCCAACCCCCTCCTTCGCCCc-----------------acacac-----------------------ggcacgtaca--tacac--acac-acacac---------------------------------------------CCTTCTGAAGCGTGAGCAG---AGAATTGGTACTTGAAGAGGACAGAGGT i proCoq1.NW_012133858v1 C 0 I 9 s otoGar3.GL873829 191156 171 + 608964 TGTTTTTTGG------------TT-----TTTTGGCTGTAAAGGGGGAGCCAGAAAGGAAAGTGTTTGTCTGGCAACCTCTAGCCCTACTCCCCGTCCC--------CGTCCCT--GCATACA----------------------GGCACTCACA--CACCT--GCAT-ACACAC------------------------------------------CCCTCTCCTAAAGCATGAGCAG---AGAATTGTTATTTGAAGGGGACAGAGGT i otoGar3.GL873829 I 515 C 0 s canFam3.chr33 2307463 164 - 31377067 TGCTTTTTTAAAAACTTTGTTTTGTTTTGTTTGGGTTGTAAAGCAGGAGCCATAAAGGGGAGTGTTTGGCTGGCGATACCCCACCGCCCCGCTCGCTCC-------------TT--ACACCTA------------------------------CA--GGCGC-------------------------------------------------------CCTTCTCGGGAAGCACGATC-G---AGCATTCCCACCGGGAAGGGGTAGAGGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2684895 174 - 6579706 -----------------------TGCTCATTTTGGCTGTAAAGGGGGAGCCAGGAAGGAAAGTGTTTGGCTGGCAACACTCAACCA--TCCTCCACTCC-------------TT--ATATACA----------------------CTCACACATT--CATGC--ATGTGACATACAC------------------------------ACACATACACCCTTTCCCTGAAGCATGAACAGAAAAAAATTACTACTTAAAAGGGGTGGACTT i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32775052 468 + 98207768 I e calJac3.chr17 73812191 138 + 74750902 I a score=117754.000000 s hg38.chr3_KI270934v1_alt 38934 20 + 163458 AGGGACGGTTGGTGGGGTAG s panTro5.chr3 2505669 20 - 202621043 AGGGATGGTTGGTGGGGTAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100230 20 - 190779 AGGGATGGTTGGTGGGGTAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51482 20 - 106623 AGGGACGGTTGGTGGGGTAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2817403 20 - 123690457 AGGGATGGTTGGTGGGGTAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2323677 20 - 204787373 AGTGATGGTTGGTGGGGTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192389440 20 - 192460366 AGTGATGGTTGGTGAGGTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19128503 20 - 19675229 AGTGATGGTTGGTGGGGTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16362108 20 - 16847902 AGTGATGGTTGGTGGGGTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91334587 20 + 91754291 AGTGATGGTTGGTGGGGTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1399508 20 + 1977891 AGTGATGGTTGGTGGGGTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7340742 20 - 7796314 AGTGATGGTTGGTGGGGTGG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17263202 16 - 17725628 AGGGAGGGTTGGCGAG---- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6351203 20 + 6778120 AAGGAGGGCTGGGGGGCTGA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 191327 9 + 608964 -----------GGGGAGCGC i otoGar3.GL873829 C 0 I 2 s canFam3.chr33 2307627 18 - 31377067 --GGAGGAGCCCGGGGGCAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2685069 18 - 6579706 -GAGAGGGTGGGCAGACAG- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14781211 9 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370970 244 + 114275543 I e calJac3.chr17 73812191 138 + 74750902 I a score=508708.000000 s hg38.chr3_KI270934v1_alt 38954 85 + 163458 GGGGTAGAAAAGCATAAAATACACAATGGGAAAA--AG--AGATTGAAATCAATATACTATTCCACAGATCCC-CAAATATCCACTCTTG s panTro5.chr3 2505689 85 - 202621043 GGGGTAGAAACGGATAAAATACACAATGGGAAAA--AG--AGATTGAAATCAATATACTATTCCATAGATCCC-CAAATATCCACTCTTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100250 85 - 190779 GGGGTAGAAAAGGATAAAATACACAATGGGAAAA--AG--AGATTGAAATCAATATACTATTCCATAGATCCC-CAAATATCCACTCTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51502 85 - 106623 GGGGTAGAAAAGGATAAAATACACAATGGGAAAA--AG--AGATTGAAATCAATATACTATTCCATAGATCCC-CAAATATCCACTCTCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2817423 87 - 123690457 GGGGTAGAAAAGGATAAAATACACAATGGGAAAAAGAG--AGATTGAAATCAATATACTATTCCATAGATCCC-CAAATATGCACTCTTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2323697 60 - 204787373 GGGGTAGAAAAGGATAAAATACACAATGGGAAAA--AGACAGATTAAAA--AATCTACTATTCT-------------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192389460 60 - 192460366 GGGGTAGAAAAGGATAAAATACACAATGGGAAAA--AGACAGATTAAAA--AATCTACTATTCT-------------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19128523 62 - 19675229 GGGGTAGAAAAGGATAAAATACACAATGGGAAAA--AGACAGATTAAAATCAATCTACTATTCT-------------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16362128 62 - 16847902 GGGGTAGAAAAGGATAAAATACACAATGGGAAAA--AGACAGATGAAAATCAATCTACTATTCT-------------------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91334607 62 + 91754291 GGGGTAGAAAAGGATAAAATACACAATGGGAAAA--AGACAGATTAAGATCAATCTACTATTCT-------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1399528 62 + 1977891 GGGGTAGAAAAGGATAAAATACACAATGGGAAAA--AGACAGATGAAAATCAATCTACTATTCT-------------------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7340762 62 - 7796314 GGGGTAGAAAAGGATAAAATACACAATGAGAAAA--AGACAGATTAAAATCAATCTGCTATTCT-------------------------- i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17263218 73 - 17725628 --------------TAAACTACACAGTGGGAAAA--AGAGAGATTGAGATCCATATGCTATTCTCTATGTCCC-CAAATAGCCACTCTTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6351223 87 + 6778120 GGGGTGGAGAAGGATAAAATACACAGTGGGAAAA--AGAGAGATTGAAATTGATGTGCCACTCTATGTGTCCC-CAAATAGCCACTCTTG i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14781220 87 - 22200726 GGGGTAGAAAAGGAAGAAATACACAATGGGAAAA--ACAGAGATTAAAATCAATATACTATTCTCTATGTCCC-AAAATATCCACTCTTG i proCoq1.NW_012133858v1 I 9 I 122 s otoGar3.GL873829 191338 82 + 608964 AGAGTGGAAAAAGCAGAAATACACAGTGGGAAAA--ATAGAGATTAAAATAAATACACTA-----TAAGCCCC-AGTATATCCACTCTTG i otoGar3.GL873829 I 2 C 0 s canFam3.chr33 2307645 81 - 31377067 ------AGAGGGGACAAGACACAGACGAGGAAAA--ACAGAGATTGGCATCAATGTATTAGTTTAGGTGTCCC-CAGATGTCCAGTCCTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2685087 86 - 6579706 GGGGCAGCAAAGGAAAAGGCACAAAGTGGGACAA--AC--AGGTTAATATCAGTATGTTATTTTAGATGTCCCAAAAATATCCATTCTTC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370970 244 + 114275543 I e calJac3.chr17 73812191 138 + 74750902 I a score=23976.000000 s hg38.chr3_KI270934v1_alt 39039 7 + 163458 GGAGTAG s panTro5.chr3 2505774 7 - 202621043 GGAGTAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100335 7 - 190779 GGAGTAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51587 7 - 106623 GGAGTAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2817510 7 - 123690457 GGAGTAG i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378146 17263291 7 - 17725628 GGAGTAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6351310 7 + 6778120 GGAGTAG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 191420 7 + 608964 GGAGTAC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2307726 7 - 31377067 GAAGTAG i canFam3.chr33 C 0 I 4 s dasNov3.JH569502 2685173 7 - 6579706 AGATTAG i dasNov3.JH569502 C 0 I 5 e proCoq1.NW_012133858v1 14781307 122 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370970 244 + 114275543 I e macNem1.NW_012014355v1 19128585 0 - 19675229 C e calJac3.chr17 73812191 138 + 74750902 I e colAng1.NW_012118932v1 7340824 0 - 7796314 C e manLeu1.NW_012102020v1 1399590 0 + 1977891 C e chlSab2.chr15 91334669 0 + 91754291 C e cerAty1.NW_012004056v1 16362190 0 - 16847902 C e macFas5.chr2 192389520 0 - 192460366 C e rheMac8.chr2 2323757 0 - 204787373 C a score=33167.000000 s hg38.chr3_KI270934v1_alt 39046 23 + 163458 CAAGTGTTAGAG-GATTCCATTTT s panTro5.chr3 2505781 23 - 202621043 CAAGTGTTAGAG-GATTCCATTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100342 23 - 190779 CAAGTGTTAGAG-GATTCCATTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51594 23 - 106623 CAAGTGTTAGAG-GATTCCATTTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2817517 23 - 123690457 CAAGTGTTAGAA-GGTTCCATTTT i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378146 17263298 22 - 17725628 AACGTGTTAGAG-GTTCCACTTT- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6351317 22 + 6778120 AACGTGTTAGAG-ATTCCATTTT- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 191427 23 + 608964 AAAGTACTGGAA-GTTTCCATCTT i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2685185 24 - 6579706 TAAGTACTGGGGAGGCTACATTTG i dasNov3.JH569502 I 5 C 0 e proCoq1.NW_012133858v1 14781307 122 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370970 244 + 114275543 I e macNem1.NW_012014355v1 19128585 0 - 19675229 C e calJac3.chr17 73812191 138 + 74750902 I e canFam3.chr33 2307733 4 - 31377067 I e colAng1.NW_012118932v1 7340824 0 - 7796314 C e manLeu1.NW_012102020v1 1399590 0 + 1977891 C e chlSab2.chr15 91334669 0 + 91754291 C e cerAty1.NW_012004056v1 16362190 0 - 16847902 C e macFas5.chr2 192389520 0 - 192460366 C e rheMac8.chr2 2323757 0 - 204787373 C a score=740156.000000 s hg38.chr3_KI270934v1_alt 39069 98 + 163458 AGGG-AGATTCCCCGAGTCGCTTCAGT--AAGGGAGTTAGAAAGGGGAGCGCAGGGAGCTTGGTGAGG-TCTCGGCGCC-----GC-AGCCTTTGCTGAGCTGCTGTA s panTro5.chr3 2505804 97 - 202621043 AGGG-AGATTCCCCGAGTCGCTTCAGT--AAGGGAGTTAGAAAGGGGAGC-CAGGGAGCTTGGTGAGG-TCTCGGCGCC-----GC-AGCCTTTGCTGAGCTGCTGTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100365 97 - 190779 AGGG-AGATACCCTGAGTCGCTTCAGT--AAGGGAGTTAGAAAGGGGAGC-CAGGGAGCTTGGTGAGG-TCTCGGCGCC-----GC-AGCCTTTGCTGAGCTGCTGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51617 98 - 106623 AGGG-AGATTCCCCGAGTCGCTTCAGT--AAGGGAGTTAGAAAGGGGAGCGCAGGGAGCTTGGTGAGG-TCTCGGCGCC-----GC-AGCCTTTGCTGAGCTGCTGTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2817540 98 - 123690457 AGGG-AGATTCCCTGAGTCGATTCAGT--AAGGGAGTTAGAAAGGGAAGTGCAGGGAGCTTGGTGAGG-CCTGGGCGCC-----GC-AGCCTTTGCTGCGCTGTTGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2323757 96 - 204787373 --GG-AACTGCCCCGAGTTGCTTCAGT--AAGGGAGTTAGAAAGGGGAGTGCAGGGAGCATGGGGAGA-TATTGGAGCC-----AC-AGCCTTTGCTGGGCTGTTGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192389520 96 - 192460366 --GG-AACTGCCCCGAGTTGCTTCAGT--AAGGGAGTTAGAAAGGGGAGTGCAGGGAGCGTGGGGAGA-TATTGGAGCC-----AC-AGCCTTTGCTGGGCTGTTGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19128585 96 - 19675229 --GG-AGCTGCCCCGAGTTGCTTCAGT--AAGGGAGTTAGAAAGGGGAGTGCAGGGAGCATGGGGAGA-TATTGGAGCC-----AC-AGCCTTTGCTGGGCTGTTGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16362190 96 - 16847902 --GG-AGCTGCCCCGAGTTGCTTCAGT--AAGGGAGTTGGAAAGGGGAGTTCAGGGAGCGTGGGGAGA-TATTGGAGCC-----AC-AGCCTTTGCTGGGCTGTTGTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91334669 98 + 91754291 --GG-AGATGCCCCAAGCTGCTTCAGTAAAAGGGAGTTAGAAAGGGGAGGGCAGGGAGCTTGGTGAGA-TATTGGAGCC-----AC-AGCCTTTGCTGGGCTGTTGTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1399590 96 + 1977891 --GG-AGCTGCCCCGAGTTGCTTCAGT--AAGGGAGTTGGAAAGGGGAGTGCAGGGAGCGTGGGGAGA-TGTTGGAGCC-----AC-AGCCTTTGCTGCGCTGTTGTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7340824 97 - 7796314 --GGAAGATGCCCCGAGTTGCTTCAGT--AAGGGAGTTAGAAAGGGGAGTGCAGGGATCTTGGTGAGA-TATTGGAGCC-----AC-AGCCTTTGCTGGGCTGTTGTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73812329 88 + 74750902 aGGG-AGATTCCCTGAGTCGTTTCAGT--AAGGGAGTTAGAAAGGGGAGT-CTGGGAGCTTGGTGA----------ACC-----AC-GGCCTTTGCTGGGCTGTTGTT i calJac3.chr17 I 138 C 0 s saiBol1.JH378146 17263320 92 - 17725628 AGGG-AGATTCCCTGAGTCATTTCAGT--AAGGGAGTTAGAAACGGG-GT-CAGGGAGCTTGGGGG----------AACCACATAC-AGCCTTTGCTGGGCTATTGTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6351339 87 + 6778120 AGGG-AGATTCCCTGGGTCGTTTCAGT--AAGGGAGTTTGAGAGGGGAGT-C-GGGAGCCTGGTGA----------GCC-----AC-AGCCGTTGCTGGGCTGTTGTT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 191450 97 + 608964 AGGG-AGATTCCCAGAGTGGTTTCAGT--GGGGGAGTCAGAAAGGAGAGACCAGAGAGCTTGATGAAA-TTTCTGGAAC------C-ATCGTTTGCTCTGCCATTATT i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2685209 98 - 6579706 AGGG-AGCTTTCCAGAATCAGTTTCAC--GAAGGAGTAAAAAAAAAGAC--CATGAAACTTGATGAGATTTTTGGAACC-----ACTAACATTTCCTGTGTCGTTATT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14781307 122 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370970 244 + 114275543 I e canFam3.chr33 2307733 4 - 31377067 I a score=157238.000000 s hg38.chr3_KI270934v1_alt 39167 21 + 163458 CTGGCTGCTGTGTTTTCTCAC--- s panTro5.chr3 2505901 21 - 202621043 CTGGCTGCTGTGTTTTCTCAC--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100462 21 - 190779 CTGGCTGCTGTGTTTTCTCAC--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51715 21 - 106623 CTGGCTGCTGTGTTTTCTCAC--- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2817638 21 - 123690457 CTGGCTGCTGCGTTTTCTCAC--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2323853 19 - 204787373 CTGGTTGCTGTGTTTTCT--C--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192389616 19 - 192460366 CTGGTTGCTGTGTTTTCT--C--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19128681 19 - 19675229 CTGGTTGCTGTGTTTTCT--C--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16362286 19 - 16847902 CTGGTTGCTGCGTTTTCT--C--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91334767 19 + 91754291 CTGGTTGCTGCGTTTTCT--C--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1399686 19 + 1977891 CTGGTTGCTGTGTTTTCT--C--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7340921 19 - 7796314 CTGGTTGCCGCGTTTTCT--C--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73812417 21 + 74750902 CTGGTTGCTGCATTTTCTTAC--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17263412 21 - 17725628 CTGGTTGCTGCGTTTTCTTAC--- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6351426 20 + 6778120 CTGGTTGCTGCA-TTTCTTAC--- i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14781429 21 - 22200726 CTGGTTGTTGTGTCTTCTCAT--- i proCoq1.NW_012133858v1 I 122 C 0 s otoGar3.GL873829 191547 13 + 608964 CTGGTT--------TTCTCAT--- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2685307 22 - 6579706 TTGGGTTCTGCCTGTTTT--CCAT i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88370970 244 + 114275543 I e canFam3.chr33 2307733 4 - 31377067 I a score=625909.000000 s hg38.chr3_KI270934v1_alt 39188 51 + 163458 AGTGCTCAGCAGGGAGGCTCTGTCTTCTTGGTTTGGGAGTCAGCAAGGGAG---------- s panTro5.chr3 2505922 51 - 202621043 AGTGCTCAGCAGGGAGTCTCTGTCTTCTTGGTTTGGGAGTCAGCAAGGGAG---------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100483 51 - 190779 AGTGCTCAGCAGGGAGGCTCTGTCTTCTTGGTTTGGGAGTCAGCAAGGGAG---------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51736 51 - 106623 AGTGCTCAGCAGGGAGGCTCCGTCTTCTTGGTTTGGGAGTCAGCAAGGGCG---------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2817659 51 - 123690457 AGTGCTCAGCAGGGAGGCTCTGTGTTCTTGGTCTAGGAGTCAACAAGGGAG---------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2323872 51 - 204787373 AGTACTTAGCAGGGAGGTTCCGTCTTCTTGGTTTGGGAGTCAGCAAGGGAG---------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192389635 51 - 192460366 AGTACTTAGCAGGGAGGTTCCGTCTTCTTGGTTTGGGAGTCAGCAAGGGAG---------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19128700 51 - 19675229 AGTACTTAGCAGGGAGGTTCCGTCTTCTTGGTTTGGGGGTCAGCAAGGGAG---------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16362305 51 - 16847902 AGTACTTAGCAGAGAGGTTCTGTCGTCTTGGTTTGGGGGTCAGCAAGGGAG---------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91334786 51 + 91754291 AGTACTTAGCAGGGAGGTTCTGTCTTCTTGGTTTGGGGGTCAGCAAGGGAG---------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1399705 51 + 1977891 AGTACTTAGCAGGGAGGTTCCGTCTTCTTGGTTTGGGGGTCAGCAAGGGAG---------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7340940 51 - 7796314 AGTACTTAGCAGGGAGGTTCTGTCTTCTTGGTTTGGGAGTCAGCAACGGAG---------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73812438 51 + 74750902 GGTGCTTAGCAGGGAGGCTCTGTCTTCCTGGCTCGGGAGTCAGCAAAGGAG---------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17263433 51 - 17725628 GGTGCTTAGCAGGGAGGCTCTGTTTTCCTGGCTTGGGAGTCAGCAAAGGAG---------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6351446 51 + 6778120 GGTGCTTAGCAGGGAGGCTCTGTCTTCCTGGCTTGGGAGTCAGCAAAGGAG---------- i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88371214 51 + 114275543 AGTGCTTAGCAGTGAGACTCTGACTTCTTGGTTTGGGAGTCAGGAAGGGAG---------- i micMur3.chr1 I 244 C 0 s proCoq1.NW_012133858v1 14781450 51 - 22200726 GGTACTTAGCAGTGAGGCTCTGTCTTCTTGGTTTGGGAGTCAGGAAGGGAG---------- i proCoq1.NW_012133858v1 C 0 I 113 s otoGar3.GL873829 191560 51 + 608964 GGTGCTTAGAGGTGAGGGTCTGTCTTCCTGGTTTGGGTGTCAAGAAGGAAG---------- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2685329 61 - 6579706 TGCGCTGAGCAGTCAATCTCTGCATCACTGGTCTCGGGGTCAGCAAGGAGAGGTGGAGCAA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32775052 468 + 98207768 I e canFam3.chr33 2307733 4 - 31377067 I a score=15300.000000 s hg38.chr3_KI270934v1_alt 39239 1 + 163458 G s panTro5.chr3 2505973 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100534 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51787 1 - 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2817710 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2323923 1 - 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192389686 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19128751 1 - 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16362356 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91334837 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1399756 1 + 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7340991 1 - 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73812489 1 + 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17263484 1 - 17725628 G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6351497 1 + 6778120 G i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88371265 1 + 114275543 G i micMur3.chr1 C 0 I 116 s otoGar3.GL873829 191611 1 + 608964 G i otoGar3.GL873829 C 0 I 6 s dasNov3.JH569502 2685390 1 - 6579706 G i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e canFam3.chr33 2307733 4 - 31377067 I a score=264086.000000 s hg38.chr3_KI270934v1_alt 39240 29 + 163458 TC--AATTTCAGCTTATATGAAATCCAGTTT s panTro5.chr3 2505974 29 - 202621043 TC--AATTTCAGCTTATATGAAATCCAGTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100535 29 - 190779 TC--AATTTCAGCTTATATGAAATCCAGTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51788 29 - 106623 TC--AATTTCAGCTTATATCAAATCCAGTTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2817711 29 - 123690457 TC--AATTTCAGCTTCTATGGAATCCAGTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2323924 31 - 204787373 TCAAAATGTCAGCTTATATGAAATCCAGTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192389687 31 - 192460366 TCAAAATGTCAGCTTATATGAAATCCAGTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19128752 31 - 19675229 TCAAAATGTCAGCTTATATGAAATCCAGTTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16362357 31 - 16847902 TCAAAATGTCAGCTTATATGAAATCCAGTTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91334838 31 + 91754291 TCAAAATGTCAGCTTATATGAAATCCAGTTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1399757 31 + 1977891 TCAAAATGTCAGCTTATATGAAATCCAGTTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7340992 31 - 7796314 TCAAAATGTCAGCTTATATGAAATCCAGTTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73812490 31 + 74750902 TCAAAACTTCAGCTTATATGAAATCCAGTTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17263485 31 - 17725628 TCAAAACTTCAGCTTATATGAAATCCAGTTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6351498 30 + 6778120 TC-AAACTTCAGCTTAgatgaaatccagttt i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 191618 31 + 608964 AAGACACAGTAGCTTATATGGAATCCAGTTT i otoGar3.GL873829 I 6 C 0 s dasNov3.JH569502 2685391 29 - 6579706 --TTACCTGCAGTCTCCGTGAGATCAAGTTT i dasNov3.JH569502 C 0 I 53 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88371266 116 + 114275543 I e canFam3.chr33 2307733 4 - 31377067 I a score=28635.000000 s hg38.chr3_KI270934v1_alt 39269 3 + 163458 GCA s panTro5.chr3 2506003 3 - 202621043 GCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100564 3 - 190779 GCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51817 3 - 106623 GCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2817740 3 - 123690457 GCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2323955 3 - 204787373 GCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192389718 3 - 192460366 GCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19128783 3 - 19675229 GCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16362388 3 - 16847902 GCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91334869 3 + 91754291 GCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1399788 3 + 1977891 GCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7341023 3 - 7796314 GCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73812521 3 + 74750902 GCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17263516 3 - 17725628 GCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6351528 3 + 6778120 gca i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 191649 3 + 608964 TCA i otoGar3.GL873829 C 0 I 12 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88371266 116 + 114275543 I e dasNov3.JH569502 2685420 53 - 6579706 I e canFam3.chr33 2307733 4 - 31377067 I a score=3579741.000000 s hg38.chr3_KI270934v1_alt 39272 440 + 163458 GGCCACAtaggagcctgaggcaggcggattgcttgagctcaggactttgagaccagcctgggcaatatggcaagaccctgtctctactaaaaatcaaaaaattagctgggcgtggtggcatatgcctgtaatctcaagtatttgggaggctgaggcacaagaattgctttaacttgggagggggacattgcagtgagccgagatcgagacactgcactgcagcgtgggaaacagaacgaga--ctgtctcatt-aaaaaaaaaagcaga--------------agaaaaatacaaaaattagtgggcgtggtggtgcatgcctgtagccccagctcctc------gggaggct--gaggtgggaggatggc--ttgaacctgggaggtggagtttgcagtgagccaagatcaagacattgcactccagcctgggcaaccgagtgggaccctgtctca--------aaataaataa s panTro5.chr3 2506006 440 - 202621043 GGCCACACAggagcctgaggcaggcggattgcttgagctcaggactttgagaccagcctgggcaatatggcaagaccctgtctctactaaaaatcaaaaaatcagctgggcgtggtggcatatgcctgtaatctcaagtatttgggaggctgaggcacaagaattgctttaacttgggagggggacattgcagtgagccgagatcgagacactgcactgcagcgtgggaaacagaacgaga--ctgtctcata-aaaaaaaaaagcaga--------------agaaaaatacaaaaaTTAGTgggcgtggtggtgcatgcctgtagccccagctcctc------gggaggct--gaggtgggaggatggc--ttgaacttgggaggtggagtttgcagtgagccaagatcaagacattgcactccagcctgggcaaccgagtgggaccctgtctca--------aaataaataa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100567 439 - 190779 GGCCACACAggagcctgaggcaggcggattgcttgagctcaggactttgagaccagcctgggcaatatggcaagaccctgtctctactaaaaatcaaaaaattagctgggcgtggtggcatatgcctgtaatctcaagtatttgggaggctgaggcccaagaattgctttaacttgggagggggacattgcagtgagccgagatcgagacactgcactgcagcgtgggaaacagaacgaga--ctgtctcat--aaaaaaaaaagcaga--------------agaaaaatacaaaaaTTAGTgggcgtggtggtgcatgcctgtagccccagctcctc------gggaggct--gaggtgggaggatggc--ttgaacttgggaggtggagtttgcagtgagccaagatcaagacattgcactccagcctgggcaaccgagtgggaccctgtctca--------aaataaataa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51820 440 - 106623 GGCCACAtaggagcctgaggcaggcggattgcttgagctcaggactttgagaccagcctgggcaatatggcaagaccctgtctctattaaaaatcaaaaaattagctgggcgtggtggcatatgcctgtaatctcaagtatttgggaggctgaggcacaagaattgctttagcttgggagggggacattgcagtgagccgagatcgagacactgcactgcagcgtgggaaacagaacgaga--ctgtctcatt-aaaaaaaaaagcaga--------------agaaaaatacaaaaattagtgggcatggtggtgcatgcctgtagtcccagctcctc------gggaggct--gaggtgggaggatggc--ttgaacctgggaggtggagtttgcagtgagccaagatcaagacattgcactccagcctgggcaaccgagtgggaccctgtctca--------aaataaataa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2817743 441 - 123690457 GGCCACACAggagcctgaggcaggcggattgcttgagctcaggactttgagatcagcctgggcaatatggcaagaccgtgtctctactaaaaatcaaaaaattagctgggcgtgttggcatatgcctgtaatctcaactatttgggaggctgaggcacaagaattgctttaacttgggcgggggacattgcaatgagccgagatcgagacactgcactgcagcctgggaaacagaatgaga--ttgtctcattaaaaaaaaaaagcaga--------------agaaaaatacaaaaaTTAGTgggcgtggtggtgcatgcctgtagtcccagctcctt------gggaagct--gaggtgggaggatggc--ttgaacctgggaggtggagtttgcagtgagccaagatcaagacattgcactccagcctgggtgacacagtgggaccctgtctca--------aaataaataa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2323958 444 - 204787373 GGCCACAtaggagcctgaggcaggtggattgcttgagctcaggacttcgagaccagcctgggcaatatgtgaagacgctgtctctaataaaaatcaaaaaattagctgggcatggtggcatatgcctgtaatcccagctatttgggaggctgaggcacaagaattgctttaactcaggagggggacattgcagtgagccgagatcgagacattacactgcagcctggaaaacagaacgaga--ctgtctcata----aaaaaaagaaaa--------------agaaaaatacaaaaaTTAGTgggcatggtagtacatgcctatagtcccagctcctc------aggaggct--gaggtgggaggatggc--ttgaacctgggaggtggagtttgcagtgagccgagatcaagacactgcactccagcctgggtgacatagtgcgaccctgtctca-aataaataaataaataa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192389721 441 - 192460366 GGCCACAtaggagcctgaggcaggtggattgcttgagctcaggacttcgagaccagcctgggcaatatgtgaagacgctgtctctaataaaaatcaaaaaattagctgggcatggtggcatatgcctgtaatcccagctatttgggaggctgaggcacaagaattgctttaactcaggagggggacattgcagtgagccgagatcaagacattacactgcagcctggaaaacagaacgaga--ctgtctcata----aaaaaaagaaaa--------------agaaaaatacaaaaattagtgggcatggtagtacatgcctatagtcccagctcctc------aggaggct--gaggtgggaggatggc--ttgaacctgggaggtggagtttgcagtgagccgagatcaagacactgcactccagcctgggtgacatagtgcgaccctgtctca----aaataaataaataa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19128786 445 - 19675229 GGCCACAtagaagcctgaggcaggtggattgcttgggctcaggacttcgagaccagcctgggcaatatgtgaagacgctgtctctaataaaaatcaaaaaattagctgggcatggtggcatatgcctgtaatcccagctatttgggaggctgaggcacaagaattgctttaactcaggagggggacattgcagtgagccgagatcgagacattacactgcagcctggaaaacagaacgaga--ctgtctcata----aaaaaaagaaaa--------------agaaaaatacaaaaaTTAGTgggcatggtagtacatgcctatagtcccagctcctc------aggaggct--gaggtgggaggatggc--ttgaacctgggaggtggagtttgcagtgagccgagatcaagacactgcactccagcctgggtgacatagtgcgaccctgtctaaaaataaataaataaataa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16362391 445 - 16847902 GGCCACAtagaagcctgaggcaggtggattgcttgagctcaggacttcgagaccagcctgggcaatatgtgaagacattgtctctaataaaaatcaaaaaattagctgggcatggtggcatatgcctgtaatcccagctatttgggaggctgaggcacaagaattgctttaactcgggagggggacattgcagtgagccgagatcgagacattgcactgcagcctggaaaacagaacgaga--ctgtctcata----aaaaaaagaaaa--------------agaaaaatacaaaaaTTAGTgggcatggtagtacatgcctatagtcccagctcctc------aggaggct--gaggtgggaggatggc--ttgaacctgggaggtggagtttgcagtgagccaagatcaagacactgcactccagcctgggtgacagagtgtgaccctgtctcaaaataaataaataaataa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91334872 444 + 91754291 GGCCACAtaggagcctgaggcaggtggattgcttgagctcaggacttcgagaccagcctgggcaatatggcaagatgctgtctctactaaaaatcaaaaaattagctgggcgtggtggcatatgcctgtaatcccagctatttgggaggctgaggtacaataattgctttaactcgggagggggacattgcagtgagctgagatcgagacactgcactgcagcctggaaaacagaacaaga--ctgtctcat-----aaaaaaagaaaa--------------agaaaaatacaaaaaCTGGTgggcatggtggtacaagcctatagtcccagctcctc------aggaggct--gaggtgggaggatggc--ttgaacctgggaggtggagtttgcagtgagctgagatcaaaacactgcactccagcctgggcgacggagtacgaccctgtctcaaaataaataaataaataa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1399791 445 + 1977891 GGTCACAtagaagcctgaggcaggtggattgcttgagctcaggacttcgagaccagcctgggcaatatgtgaagacgctgtctctaataaaaatcaaaaaattagctgggcatggtggcatatgcctgtaatcccagctatttgggaggctgaggcacaagaattgctttaactcgggagggggacattgcagtgagccgagatcgagacactgcactgcagcctggaaaacagaacgaga--ctgtctcata----aaaaaaagaaaa--------------aggaaaatacaaaaaTTAGTgggcatggtagtacatgcctatagtcccagctcctc------aggaggct--gaggtgggaggatggc--ttgaacctgggaggtggagtttgcagtgagccgagatcaagacactgcactccagcctgggtgacagagtgcgaccctgtctcaaaataaataaataaataa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7341026 445 - 7796314 GGCCACAtaggagcctgaggcaggtggattgcttgagctcaggacttcgagaccagcctgggcaatatggcaagacgctgtctctactaaaaataaaaaaattagctgggcgtggtggcatatgcctgtaatcccagctatttgggaggctgaggcacaagaattgctttaactcgggagggggacattgcagtgagccaagatcgagacattacactgcagcctggaaaacagaacgaga--ctgtctcatc----aaaaaaagaaaa--------------agaaaaatacaaaaattagcgggcatggtagtacatgcctatagtcccagctcctc------aggaggct--gaggtgggaggatggc--ttgaacctgggaggtggagtttgcagtgagccaatatcaagacactgcattccagcctgggcaacagagtgggaccctgtctcaaaataaataaataaataa i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73812524 441 + 74750902 GGCCACAtgggaggctgaggcaggcagattgcttgagctcaggacttcgagaccagcctgggcaatatgaccagaccccatgtctactaaaaatcaaaaaattagctgggcatggtggcacgtgcctgtaatcccagcttttcgggaggctgaggcacaagaattgctttaactcgggaggtggacgttgcagtgagccgatattgaaacactacactccagc-ggggcaacagaatgcgactctgtctcata-aaaaaaaaa--------------------agaaaaatacaaaaa---GTgggcataatagagcatgcctgtagtcctggcccctccctagtgggaggatgggaggcgggaggatagcttttgagcct-ggaggcggaggttgcagtgagcagagatcaagacactgcactccaacctgggtgacagagtgagaccctgtctca--------aaataaataa i calJac3.chr17 C 0 I 8 s saiBol1.JH378146 17263519 455 - 17725628 GGCCACAtgggaggctgaggcaggcagactgcttgagctcaggactt---aaccagcctgggcaatatggccagaccccatgtctactaaaaatcaaaaaattagctgggcctggtggcacatgcctgtaatcccagcttttcgggaggctgaggcacaagaattgctttcattcgggaggtggacattgcagtgagccgagactgagacactacactccagc-tgggcaacagaatgagactctgcctcatt-aaaaaaaaaaaaaaagagagagagag---aGAGAAATACAAAAA---GTgggcatgatagcacacgcctgtagtcccagcccctccctagtgggaggctgggaggtgggaggacagcttttgagcct-ggaggtggaggttgcagtgagcagagatcgagacactgccctccaacctgggtgacagactgagacactgtctca--------aaataaataa i saiBol1.JH378146 C 0 I 8 s cebCap1.NW_016107444v1 6351531 461 + 6778120 ggccacatgggaggatgaagcaggcggattgcttgagctcaggactccgagaccagcctggacaatatggccagaccccgtgtctactaaaaatcaaaaaattagctgggtgtgttggcacatgcctgtcatcccagcttttcaggaggctgaggcacaagaattgctttaactctggaggaggacatagcagtgagccgagattgagacactacactccagc-tgggcaacagaatgagactctgcctcata-aaaaaaaaaaaaaaaaagaaagaaagaaaagaaaaatacaaaaa---gtgggcatgatagcacatgtctgtagtcccagctcctccctagtgggaggatgggaggtgggaggacagcttttgagcct-ggaggtggagtttgcagtgagcagagatcaagacactgcactccaacccgggtgacagggtgagaccctgtctca--------acataaataa i cebCap1.NW_016107444v1 C 0 I 116 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88371266 116 + 114275543 I e dasNov3.JH569502 2685420 53 - 6579706 I e canFam3.chr33 2307733 4 - 31377067 I e otoGar3.GL873829 191652 12 + 608964 I a score=208389.000000 s hg38.chr3_KI270934v1_alt 39712 27 + 163458 ggaaTCCAGTTTTCAAGCAATAGGaca s panTro5.chr3 2506446 27 - 202621043 ggaaTCCAGTTTTCAAGCAATAGGaca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101006 27 - 190779 ggaaTCCAGTTTTCAAGCAATAGGaca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52260 27 - 106623 GGAATCCAGTTTTCAAGCAATAGGaca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818184 27 - 123690457 ggaaTCCAGTTTTCAAGCAATAGAaca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2324402 27 - 204787373 ggaaTCCAGTTTTCAAGCAatagtaca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192390162 27 - 192460366 GGAATCCAGTTTTCAAGCAatagtaca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19129231 27 - 19675229 ggaaTCCAGTTTTCAAGCAatagtaca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16362836 27 - 16847902 ggaaTCCAGTTTTCAAGCAATAGtaca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91335316 27 + 91754291 GGAGTCCAGCTTTCAAGCAACAGAaca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1400236 27 + 1977891 ggaaTCCAGTTTTCAAGCAATAGtaca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7341471 27 - 7796314 GGAATCCAGTTTTCAAGCAATAGAaca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73812973 27 + 74750902 GGAATCCAGTTTTCAAGCAATAGTAGA i calJac3.chr17 I 8 C 0 s saiBol1.JH378146 17263982 27 - 17725628 GGAATCCAGTTTTCAGGCAATAGTAGA i saiBol1.JH378146 I 8 I 3 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88371266 116 + 114275543 I e dasNov3.JH569502 2685420 53 - 6579706 I e cebCap1.NW_016107444v1 6351992 116 + 6778120 I e canFam3.chr33 2307733 4 - 31377067 I e otoGar3.GL873829 191652 12 + 608964 I a score=43544.000000 s hg38.chr3_KI270934v1_alt 39739 11 + 163458 tacatggatac s panTro5.chr3 2506473 11 - 202621043 tacatggatac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101033 11 - 190779 tacatggatac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52287 11 - 106623 tacatggatac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818211 11 - 123690457 tacatggatac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2324429 11 - 204787373 tacacacatac i rheMac8.chr2 C 0 I 3 s macFas5.chr2 192390189 11 - 192460366 tacacacatac i macFas5.chr2 C 0 I 3 s macNem1.NW_012014355v1 19129258 11 - 19675229 tacacacatac i macNem1.NW_012014355v1 C 0 I 3 s cerAty1.NW_012004056v1 16362863 11 - 16847902 tacacacatac i cerAty1.NW_012004056v1 C 0 I 3 s chlSab2.chr15 91335343 11 + 91754291 tacatacatga i chlSab2.chr15 C 0 I 3 s manLeu1.NW_012102020v1 1400263 11 + 1977891 tacacacatac i manLeu1.NW_012102020v1 C 0 I 3 s colAng1.NW_012118932v1 7341498 3 - 7796314 tac-------- i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17264012 11 - 17725628 tacatgcatac i saiBol1.JH378146 I 3 C 0 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88371266 116 + 114275543 I e dasNov3.JH569502 2685420 53 - 6579706 I e calJac3.chr17 73813000 0 + 74750902 C e cebCap1.NW_016107444v1 6351992 116 + 6778120 I e canFam3.chr33 2307733 4 - 31377067 I e otoGar3.GL873829 191652 12 + 608964 I a score=30932.000000 s hg38.chr3_KI270934v1_alt 39750 6 + 163458 atacac s panTro5.chr3 2506484 6 - 202621043 atacac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101044 6 - 190779 atacac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52298 6 - 106623 atatac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818222 6 - 123690457 atacac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2324443 6 - 204787373 atacat i rheMac8.chr2 I 3 C 0 s macFas5.chr2 192390203 6 - 192460366 atacat i macFas5.chr2 I 3 C 0 s macNem1.NW_012014355v1 19129272 6 - 19675229 atacat i macNem1.NW_012014355v1 I 3 C 0 s cerAty1.NW_012004056v1 16362877 6 - 16847902 atacat i cerAty1.NW_012004056v1 I 3 C 0 s manLeu1.NW_012102020v1 1400277 6 + 1977891 atacat i manLeu1.NW_012102020v1 I 3 C 0 s colAng1.NW_012118932v1 7341501 6 - 7796314 atacat i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17264023 6 - 17725628 atacac i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88371266 116 + 114275543 I e dasNov3.JH569502 2685420 53 - 6579706 I e calJac3.chr17 73813000 0 + 74750902 C e cebCap1.NW_016107444v1 6351992 116 + 6778120 I e canFam3.chr33 2307733 4 - 31377067 I e otoGar3.GL873829 191652 12 + 608964 I e chlSab2.chr15 91335354 3 + 91754291 I a score=176487.000000 s hg38.chr3_KI270934v1_alt 39756 76 + 163458 acatggatacatacacacatg-------------------gatacacaca--tatggatacat--acatgg----atacatgcatacatgcatg-acacacaca s panTro5.chr3 2506490 79 - 202621043 acatggatacatacacacatg-------------------gatacacacacatatggatacat--acatgg----atacatgcatacgtgcatggatacacaca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101050 79 - 190779 acatggatacatacacacatg-------------------gatacacacacatatggatacat--acatgg----atacatgcatacatgcatggatacacaca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52304 50 - 106623 acatggatacat----acatg-------------------gatacataca------------t--acatgg----ataca--cacacatggat----------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818228 57 - 123690457 acatggatgcatacacacatg-------------------gatacatacacatatggatacatacacatgg----ataca------------------------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2324449 88 - 204787373 acattgatacatacatacatg------atacacatacatggatatatacatacattgatacat--acatgg----atacatacatacatggatacatgca---- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192390209 88 - 192460366 atattgatacatacatacatg------atacacatacatggatatatacatacattgatacat--acatgg----atacatacatacatggatacatgca---- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19129278 92 - 19675229 acattgatacatacatacatg------atacacatacatggatatatacatacattgatacat--acatggatacatacatacatacatggatacatgca---- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16362883 90 - 16847902 acattgatacatacatacatacatgatacacacatacatggatatatacatacattg----at--acatgg----atacatacatacatggatacataca---- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1400283 84 + 1977891 acattgatacatacatacatacatgatacacacatacatggatatatacatacattgatacat--acatgg----atacatacatacatg-------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7341507 77 - 7796314 acatggatacatacatacatacatg----atacatacatggatacatac------------at--gcatgg----atatatacacacatg-atacatata---- i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88371266 116 + 114275543 I e dasNov3.JH569502 2685420 53 - 6579706 I e saiBol1.JH378146 17264029 0 - 17725628 C e calJac3.chr17 73813000 0 + 74750902 C e cebCap1.NW_016107444v1 6351992 116 + 6778120 I e canFam3.chr33 2307733 4 - 31377067 I e otoGar3.GL873829 191652 12 + 608964 I e chlSab2.chr15 91335354 3 + 91754291 I a score=53607.000000 s hg38.chr3_KI270934v1_alt 39832 23 + 163458 tacatacatgg---atacatacatgg s panTro5.chr3 2506569 23 - 202621043 tacatacatgg---atacatacatgg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 52354 22 - 106623 -acatacatgg---atacacacatga i gorGor5.CYUI01000576v1 C 0 I 3 s nomLeu3.chr11 2818285 23 - 123690457 tacacacacgg---atacatacacgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2324537 26 - 204787373 tacatacatgatacatacatacattg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192390297 26 - 192460366 tacatacatgatacatacatacattg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19129370 26 - 19675229 tacatacatgatacatacatacattg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16362973 18 - 16847902 tacatg--------atacatacattg i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1400367 12 + 1977891 --------------atacacacattg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7341584 23 - 7796314 tacatacatgg---atacatacatag i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88371266 116 + 114275543 I e dasNov3.JH569502 2685420 53 - 6579706 I e saiBol1.JH378146 17264029 0 - 17725628 C e calJac3.chr17 73813000 0 + 74750902 C e cebCap1.NW_016107444v1 6351992 116 + 6778120 I e canFam3.chr33 2307733 4 - 31377067 I e otoGar3.GL873829 191652 12 + 608964 I e chlSab2.chr15 91335354 3 + 91754291 I e panPan2.chrUn_NW_014024201v1 101129 0 - 190779 C a score=46745.000000 s hg38.chr3_KI270934v1_alt 39855 28 + 163458 atacatacat-tgatac----atatctacatgg s panTro5.chr3 2506592 28 - 202621043 atacatacat-tgatac----atctctacatgg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 52379 32 - 106623 atacacacat-ggatacatggatacacacatgg i gorGor5.CYUI01000576v1 I 3 C 0 s nomLeu3.chr11 2818308 20 - 123690457 atacatac-------------acacatacgtgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2324563 29 - 204787373 atacatgcatacgatac----atacatgcatgg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192390323 29 - 192460366 atacatgcatacgatac----atacatgcatgg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19129396 29 - 19675229 atacatgcatacgatac----gtacatgcatgg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16362991 29 - 16847902 atacatgcatacgatac----gtacatgcatgg i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1400379 25 + 1977891 ata----catacgatac----atacatgcatgg i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88371266 116 + 114275543 I e dasNov3.JH569502 2685420 53 - 6579706 I e saiBol1.JH378146 17264029 0 - 17725628 C e calJac3.chr17 73813000 0 + 74750902 C e cebCap1.NW_016107444v1 6351992 116 + 6778120 I e canFam3.chr33 2307733 4 - 31377067 I e otoGar3.GL873829 191652 12 + 608964 I e colAng1.NW_012118932v1 7341607 0 - 7796314 C e chlSab2.chr15 91335354 3 + 91754291 I e panPan2.chrUn_NW_014024201v1 101129 0 - 190779 C a score=144119.000000 s hg38.chr3_KI270934v1_alt 39883 77 + 163458 --------------------atacatacat-----gatacatacacacatggatacacacatggatacatacatgcatacatgcatggatacacacatacat s panTro5.chr3 2506620 73 - 202621043 --------------------atacatacat-----gatacatacacacatggatacacacatggatacat----gcatacatgcatggatacacacatacat i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 52411 69 - 106623 --------------------atacatacacacatggatacatacacacatggatacacacatggatacat--------acatgcatggatacacaca----- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818328 47 - 123690457 --------------------atacatgcat----------------gcatagatacacacatgcatacat----------------ggatacacacata--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2324592 85 - 204787373 atacatacacacatggatacatacatacat-----gatacat----acattgatacatacgtggatatat--------acgtgcatggatatatacacacat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192390352 83 - 192460366 atacatacacac--ggatacatacatacat-----gatacat----acattgatacatacgtggatatat--------acgtgcatggatatatacacacat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19129425 83 - 19675229 atacatacacat--ggatacatacatacat-----gatacat----acatttatacatacgtggatatat--------acgtgcatggatatatacacacat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363020 85 - 16847902 atacatacatacatggatacatacatacat-----gatacat----acattgatacatacgtggatacat--------acgtgcatggatatatacacacgt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91335357 57 + 91754291 --------------------atacatgcat-----gatacat----ac--------atacatggatacat--------acatacatggttacatacatgcat i chlSab2.chr15 I 3 C 0 s manLeu1.NW_012102020v1 1400404 61 + 1977891 --------------------atacatacat-----gatacat----acattg----atacgtggatacat--------acgtgcattgatatatacacacat i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88371266 116 + 114275543 I e dasNov3.JH569502 2685420 53 - 6579706 I e saiBol1.JH378146 17264029 0 - 17725628 C e calJac3.chr17 73813000 0 + 74750902 C e cebCap1.NW_016107444v1 6351992 116 + 6778120 I e canFam3.chr33 2307733 4 - 31377067 I e otoGar3.GL873829 191652 12 + 608964 I e colAng1.NW_012118932v1 7341607 0 - 7796314 C e panPan2.chrUn_NW_014024201v1 101129 0 - 190779 C a score=21233.000000 s hg38.chr3_KI270934v1_alt 39960 11 + 163458 acatggataca s panTro5.chr3 2506693 11 - 202621043 acatggataca i panTro5.chr3 C 0 C 0 s rheMac8.chr2 2324677 10 - 204787373 -gatacatata i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192390435 10 - 192460366 -gatacatata i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19129508 10 - 19675229 -gatacatata i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363105 10 - 16847902 -gatacatata i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91335414 11 + 91754291 ggatacataca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1400465 10 + 1977891 -gatacatata i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73813000 11 + 74750902 ACATGCATACA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88371266 116 + 114275543 I e dasNov3.JH569502 2685420 53 - 6579706 I e saiBol1.JH378146 17264029 0 - 17725628 C e cebCap1.NW_016107444v1 6351992 116 + 6778120 I e canFam3.chr33 2307733 4 - 31377067 I e otoGar3.GL873829 191652 12 + 608964 I e colAng1.NW_012118932v1 7341607 0 - 7796314 C e nomLeu3.chr11 2818375 0 - 123690457 C e gorGor5.CYUI01000576v1 52480 0 - 106623 C e panPan2.chrUn_NW_014024201v1 101129 0 - 190779 C a score=47665.000000 s hg38.chr3_KI270934v1_alt 39971 23 + 163458 t-------acatacatggatacatacatct s panTro5.chr3 2506704 7 - 202621043 t-------acat----------------ct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101129 23 - 190779 t-------acatacatggatacatacatct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52480 23 - 106623 t-------acatacgtggatacatacatct i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818375 1 - 123690457 -----------------------------t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2324687 23 - 204787373 t-------acatacatggatacatacatag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192390445 23 - 192460366 t-------acatacatggatacatacatag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19129518 23 - 19675229 t-------acatacatggatacatacatag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363115 23 - 16847902 t-------acacacatgaatacatacatag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91335425 30 + 91754291 tgatacacacatgcatggatacatacatac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1400475 23 + 1977891 t-------acatacatggatacatacatag i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73813011 21 + 74750902 T-------ACATACACGTACACACTCAT-- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88371266 116 + 114275543 I e dasNov3.JH569502 2685420 53 - 6579706 I e saiBol1.JH378146 17264029 0 - 17725628 C e cebCap1.NW_016107444v1 6351992 116 + 6778120 I e canFam3.chr33 2307733 4 - 31377067 I e otoGar3.GL873829 191652 12 + 608964 I e colAng1.NW_012118932v1 7341607 0 - 7796314 C a score=10670.000000 s hg38.chr3_KI270934v1_alt 39994 2 + 163458 at s panTro5.chr3 2506711 2 - 202621043 at i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101152 2 - 190779 at i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52503 2 - 106623 at i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818376 2 - 123690457 gt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2324710 2 - 204787373 at i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192390468 2 - 192460366 at i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19129541 2 - 19675229 at i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363138 2 - 16847902 at i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91335455 2 + 91754291 at i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1400498 2 + 1977891 at i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7341607 2 - 7796314 at i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88371266 116 + 114275543 I e dasNov3.JH569502 2685420 53 - 6579706 I e saiBol1.JH378146 17264029 0 - 17725628 C e calJac3.chr17 73813032 0 + 74750902 C e cebCap1.NW_016107444v1 6351992 116 + 6778120 I e canFam3.chr33 2307733 4 - 31377067 I e otoGar3.GL873829 191652 12 + 608964 I a score=312892.000000 s hg38.chr3_KI270934v1_alt 39996 47 + 163458 acatggata----ca-----ttcattcattcattcatgcttcaatcattcatgcat s panTro5.chr3 2506713 47 - 202621043 acatggata----ca-----ttcattcattcattcatgcttcaatcattcatgcat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101154 47 - 190779 acatggata----ca-----ttcattcattcattcatgcttcaatcattcatgcat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52505 47 - 106623 acatggata----ca-----ttcattcattcattcatgcttcaatcattcatgcat i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818378 47 - 123690457 acatggata----ca-----ttcattcattcattaatgcttcaatcattcatgcat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2324712 47 - 204787373 acatggata----ca-----ttcattcattcatTAATGCTTCAATCATTCACGCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192390470 47 - 192460366 acatggata----ca-----ttcattcattcatTAATGCTTCAATCATTCACGCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19129543 47 - 19675229 acatggata----ca-----ttcattcattcatTAATGCTTCAATCATTCACGCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363140 47 - 16847902 acatggata----ca-----ttcattcattcatTAATGCTTCAATCATTCACGCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91335457 51 + 91754291 acacggatacattca-----ttcattcattcattaatgcttcaatcattcatgcat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1400500 47 + 1977891 acatggata----ca-----ttcattcattcatTAATGCTTCAATCATTCACGCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7341609 47 - 7796314 acatggata----ca-----ttcattcatTCCTTAATGCTTCAATTATTCACACAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813032 33 + 74750902 --------------------ttcattcatgcattca---gtcaatcattcattcat i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264029 45 - 17725628 acacgcaca----cactcatttcagtcacgcat-------tcaatcattcattcat i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 191664 36 + 608964 ACATATACA----ca-----ttcactaattcat-----------tcactcattcat i otoGar3.GL873829 I 12 C 0 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e mm10.chr16 32775052 468 + 98207768 I e micMur3.chr1 88371266 116 + 114275543 I e dasNov3.JH569502 2685420 53 - 6579706 I e cebCap1.NW_016107444v1 6351992 116 + 6778120 I e canFam3.chr33 2307733 4 - 31377067 I a score=4278.000000 s hg38.chr3_KI270934v1_alt 40043 1 + 163458 C s panTro5.chr3 2506760 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101201 1 - 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52552 1 - 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818425 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2324759 1 - 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192390517 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19129590 1 - 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363187 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91335508 1 + 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1400547 1 + 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7341656 1 - 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813065 1 + 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264074 1 - 17725628 c i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 191700 1 + 608964 t i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32775520 1 + 98207768 C i mm10.chr16 I 468 C 0 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e micMur3.chr1 88371266 116 + 114275543 I e dasNov3.JH569502 2685420 53 - 6579706 I e cebCap1.NW_016107444v1 6351992 116 + 6778120 I e canFam3.chr33 2307733 4 - 31377067 I a score=42560.000000 s hg38.chr3_KI270934v1_alt 40044 5 + 163458 CCCCA s panTro5.chr3 2506761 5 - 202621043 TCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101202 5 - 190779 TCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52553 5 - 106623 CCCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818426 5 - 123690457 CCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2324760 5 - 204787373 CCCCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192390518 5 - 192460366 CCCCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19129591 5 - 19675229 CCCCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363188 5 - 16847902 CCCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91335509 5 + 91754291 CCCCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1400548 5 + 1977891 CCCCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7341657 5 - 7796314 CCCCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813066 5 + 74750902 CCCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264075 5 - 17725628 cCCTG i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 191701 5 + 608964 cTCTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32775521 5 + 98207768 CCCTA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2685473 5 - 6579706 CTCTG i dasNov3.JH569502 I 53 C 0 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e micMur3.chr1 88371266 116 + 114275543 I e cebCap1.NW_016107444v1 6351992 116 + 6778120 I e canFam3.chr33 2307733 4 - 31377067 I a score=57069.000000 s hg38.chr3_KI270934v1_alt 40049 4 + 163458 TCTT s panTro5.chr3 2506766 4 - 202621043 TCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101207 4 - 190779 TCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52558 4 - 106623 TCTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818431 4 - 123690457 TCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2324765 4 - 204787373 TCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192390523 4 - 192460366 TCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19129596 4 - 19675229 TCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363193 4 - 16847902 TCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91335514 4 + 91754291 TCTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1400553 4 + 1977891 TCTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7341662 4 - 7796314 TCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813071 4 + 74750902 TCTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264080 4 - 17725628 TCTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6352108 4 + 6778120 TCTT i cebCap1.NW_016107444v1 I 116 C 0 s otoGar3.GL873829 191706 4 + 608964 TCTT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32775526 4 + 98207768 TCTT i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2685478 4 - 6579706 TCTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e micMur3.chr1 88371266 116 + 114275543 I e canFam3.chr33 2307733 4 - 31377067 I a score=376021.000000 s hg38.chr3_KI270934v1_alt 40053 32 + 163458 ACTCTAGAAAGGATTTCAGGCAAAGAGCTAGA s panTro5.chr3 2506770 32 - 202621043 ACTCTAGAAAGGATTTCAGGCAAAGAGCTAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101211 32 - 190779 ACTCTAGAAAGGATTTCAGGCAAAGAGCTAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52562 32 - 106623 ACTCTAGAAAGGATTTCAGGCAAAGAGCTAGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818435 32 - 123690457 ACTCTAGAAAGGATTTCAGGCAAAGAGCTAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2324769 32 - 204787373 ACTCTAGAAAGGATTTCAGGCAAAGAGCTAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192390527 32 - 192460366 ACTCTAGAAAGGATTTCAGGCAAAGAGCTAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19129600 32 - 19675229 ACTCTAGAAAGGATTTCAGGCAAAGAGCTAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363197 32 - 16847902 CCTCTAGAAAGGATTTCAGGCAAAGAGCTAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91335518 32 + 91754291 CCTCTAGAAAGGATTTCAGGCAAAGAGCTAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1400557 32 + 1977891 CCTCTAGAAAGGATTTCAGGCAAAGAGCTAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7341666 32 - 7796314 ACTCTAGAAAGGATTTCAGGCAAAGAGCTAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813075 32 + 74750902 ACTCTAGAAAGGATTTTAGGCAAGGAGCTAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264084 32 - 17725628 ACTCTAGAAAGGATTTCAGGCAAGGACCTAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6352112 32 + 6778120 ACTCTGGAAAGCATTTTAGGCAAGGAGCTACA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 191710 22 + 608964 ACTGTAG----------AGGCAAGGAGATATG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32775530 32 + 98207768 GCTCTACCAAGGATTCCAGAGAAGGAGGTATG i mm10.chr16 C 0 C 0 s canFam3.chr33 2307737 32 - 31377067 ACTCTAAGAAGGGGTTCGGGCAAGGAGATGTG i canFam3.chr33 I 4 C 0 s dasNov3.JH569502 2685482 32 - 6579706 ACTCTAGAAAGGTTTTCAGGCAAGAAGATATG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14781501 113 - 22200726 I e micMur3.chr1 88371266 116 + 114275543 I a score=2754083.000000 s hg38.chr3_KI270934v1_alt 40085 240 + 163458 GTGTGAGAGGG--------AAGA------GGCTGAGATCCTGGTGCAGG-GCCAGGCAG--GGGGTC-AGGGT-AAACAA--TGACCCAGGGAGGCCAGCTGGGCAGGACTACCGTGTGGCTTT--AGGCAGGGCCTTGCCGCCCCACGGCCTGG-TC-AAGAAGGTGCTCAGCAGGTGCTGGTGGGGCTGAGACAT-GACT----C-----------------------------------AGGGTCCACGGGTTCTCAGGCCAAAGGGGTC--AG--T-CAGAAACACCCAGAAGCCCTTCCCAGTTT s panTro5.chr3 2506802 240 - 202621043 GTGTGAGAGGG--------AAGA------GGCTGAGATCCGGGTGCAGG-GCCAGGCAG--GGGGTC-AGGGT-AAACAA--TGACCCAGGGAGGCCAACTGGGCAGGACTACCGTGTGGCTTT--AGGCAGGGCCTTGCCGCCCCACGGCCTGG-TC-AAGAAGGTGCTCAGCAGGTGCTGGTGGGGCTGAGACAT-GACT----C-----------------------------------AGGGTCCACGGGTTCTCAGGCCAAAGGGGTC--AG--T-CAGAAACACCCAGAAGCCCTTCCCAGTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101243 240 - 190779 GTGTGAGAGGG--------AAGA------GGCTGAGATCCTGGTGCAGG-GCCAGGCAG--GGGGTC-AGGGT-AAACAA--TGACCCAGGGAGGCCAACTGGGCAGGACTACCGTGTGGCTTT--AGGCAGGGCCTTGCCGCCCCACGGCCTGG-TC-AAGAAGGTGCTCAGCAGGTGCTGGTGGGGCTGAGACAT-GACT----C-----------------------------------AGGGTCCACGGGTTCTCAGGCCAAAGGGGTC--AG--T-CAGAAACACCCAGAAGCCCTTCCCAGTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52594 240 - 106623 GTGTGAGAGGG--------AAGA------GGCTGAGATCCTGGTGCAGG-GCCAGGCAG--GGGGTC-AGGGT-AAACAA--TGACCCAGGGAGGCCAACTGGGCAGGACTACCGTGTGGCTTT--AGGCAGGGCCTTACCGCCCCACGGCCTGG-TC-AAGAAGGTGCTCAGCAGGTGCTGGTGGGGCTGAGACAT-GACT----C-----------------------------------AGGGTCCACGGGTTCTCAGGCCAAAGGGGTC--AG--T-CAGAAACACCCAGAAGCCCTTCCCAGTTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818467 243 - 123690457 GTGTGAGAGGG--------AAGA------GGCTGAGATCCCGGTGCAGG-GCCAGGCAG--GGGGTC-AGGGTAAAACAA--TGACCCAGGGAGGCCAACTGGGAAGGACTACTGTGTGGCTTT--AGGCAGGACCTTGCAGCCCCACGGCCTGG-TC-AAGAAGGTGCTCAGCAGGTGCTGGTGGGGCTGAGACAC-AAAT----C-----------------------------------AGGGTCCACGGGTTCTCAGGCCAAAGGGGTCAGAG--T-CAGAAACACCCAGAAGCCTTTCTCAGTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2324801 240 - 204787373 GTGTGAGAGGG--------AAGA------GGCTGAGATCCTGGTGCAGG-GCCAGGCAA--GGAGTC-GGAGT-AAATAA--TGAACCAGGGAGGCCAAATGGGCAGGACTACCGTGTGGCTTT------AGGGCCTTGCAGCCCCAGGGCCTGG-TC-AAGAAGATACTCACCAGGTGCTGGTGGAGCTGAGACAT-GACTCAGGC-----------------------------------AGGGTCCACGGGTTCCCAGGCCAAAGGGGTC--AG--T-CAGAGACAGCCAGAAGCCCTTACCAGTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192390559 240 - 192460366 GTGTGAGAGGG--------AAGA------GGCTGAGATCCTGGTGCAGG-GCCAGGCAA--GGAGTC-GGAGT-AAATAA--TGAACCAGGGAAGCCAAATGGGCAGGACTACCGTGTGGCTTT------AGGGCCTTGCAGCCCCAGGGCCTGG-TC-AAGAAGATACTCACCAGGTGCTGGTGGAGCTGAGACAT-GACTCAGGC-----------------------------------AGGGTCCACGGGTTCCCAGGCCAAAGGGGTC--AG--T-CAGAGACAGCCAGAAGCCCTTACCAGTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19129632 240 - 19675229 GTGTGAGAGGG--------AAGA------GGCTGAGATCCTGGTGCAGG-GCCAGGCAA--GGAGTC-GGAGT-AAATAA--TGAACCAGGGAGGCCAAATGGGCAGGACTACCGTGTGGCTTT------AGGGCCTTGCAGCCCCAGGGCCTGG-TC-AAGAAGATACTCACCAGGTGCTGGTGGAGCTGAGACAT-GACTCAGGC-----------------------------------AGGGTCCACGGGTTCCCAGGCCGAAGGGGTC--AG--T-CAGAGACAGCCAGAAGCCCTTACCAGTTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363229 241 - 16847902 GTGTGAGAGGG--------AAGA------GGCTGAGATCCTGGTGCAGG-GCCAGGCAA--GGAGTCGGGGGT-AAATAA--TGAACCGGGGAGGCCAAATGGGCAGGACTACCATGTGGCTTT------AGGGCCTTGCAGCCCCAGGGCCTGG-TC-AAGAAGATACTCACCAGGTGCTGGTGGAGCTGAGACAT-GACTCAGGC-----------------------------------AGGGTCCATGGGTTCCCAGGCCAAAGGGGTC--AG--T-CAGAGACAGCCAGAAGCCCTTACCGGTTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91335550 244 + 91754291 GTGTGAGAGGG--------AAGA------GGCTGAGATCCTGGTGCAGG-GCCAGGCAG--GGAGTC-AGGGT-AAATAA--TGAACCAGGGAGGCCAAATGGGCAGGAGCACCGTGTGGCTTT--AGGCAGGGCCTCGCAGCCCCAGGGCCTGG-TC-AAGAAGGTACTCACCAGGTGCTGGTGGAGCTGAGACAT-GACTCAGGC-----------------------------------AGGGTCCACGGGTTCTCAGGCCAAAGGGGTC--AG--T-CAGAAACACCCAGAAGCCCCTACCGGTTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1400589 240 + 1977891 GTCTGAGAGGG--------AAGA------GGCTGAGATCCTGGTGCAGG-GCCAGGCAA--GGAGTC-GGGGT-AAATAA--TCAACCAGGGAGGCCAAATGGGCAGGACTACCGTGTGACTTT------AGGGCCTTGCAGCCCCAGGGCCTGG-TC-AAGAAGATACTCACCAGGTGCTGGTGGAGCTGAGACAT-GACTCAGGC-----------------------------------AGGGTCCACGGGTTCCCAGGCCAAAGGGGTC--AG--T-CAGAGACAGCCAGAAGCCCTTACCAGTTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7341698 244 - 7796314 GTGTGAGAGGG--------AAGA------GGCTGAGATCCTGGTGCAGG-GCCAGGCAG--GGAGTC-AGGGT-AGATAA--TGAACCAGGGAGGCCAAATGGGCAGGACTACCGTGTGGCTTT--AGGCAGGGCTTTGCAGCCCCAGGGCCTGG-TC-AAGAAGGTACTCACCAGGTGCTGGTGGAGCTGAGACAT-GACTCAGGC-----------------------------------AGGGTCCACAAGTTTCCAGGCCAAAGGGGTC--AG--T-CAGAAACACCCAGAAGCCCTTACCAGTTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813107 238 + 74750902 GTGCGAGAGGG--------AAGA------GGCTGAGCTCCTGTTGCAGG-ACCAGTCAG--GGGGTC-AGCAT-AAACAA--TGACCCAGGGAGGCCGGATGGGCAGCACTGCCGTGTGGCTTT--AAACAGGGCCTTGCAGCCCCCAGGCACGG-TC-AAGACGGTGCTCAGTAGGTGCTGGAGGAACTAAGACAT-GACT----C-------------------------------------GGTCCCCGGGTTCTCAAGCCAGAGGGATC--CG--T-CAGAAACACCCAGAAGCCCTTACTACTTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264116 239 - 17725628 GTGCGAGAGGG--------AAGA------GGCCGAGCTCCTGGTGCAGG-ACCAGGCA---GGGGTC-AGGGT-GAACAA--TGACCCAGGGAGGCCCACTGGGCAGCGCTACCGTGTGGCTTC--AGGCAGGGCCCTGCAGCCCCCAGGCGTGG-TC-AAGACGGTGCTCAGTAGGGGCTGGCGGAGCTGAGACAT-GACT----C-----------------------------------AGGGTCCACAGGTTCTCAAGCCAGAGGGATC--CG--T-CAGAAACGCCCAGAAGCCCTTACTAGTTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6352144 273 + 6778120 GTGTGAGAGGG--------ACGA------GGCTGAGCTCCTGGTGCAGG-ACGGGG-----GGGGTC-AGGGC-AAACAA--TGACCCGGGGAGGCCAGATGGGCAGCACTACCGTGTGGCTTT--AGGCAGGGCCTTGCAGCCCCCAGGCCTGGCCC-AAGACGGTGCTCGGTAGGTGCTGGCAGAGCTAAGACAT-GACT----CAGGGTCCACCGGTTCTCAAGCCAGAGACATGACTCAGGGTCCACCGGTTCTCAAGCCAGAGGGATC--CA--T-CAGAAACACCCAGAAGCCCTGACTAGTTT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88371382 241 + 114275543 GTGTGAGAGGG--------AAGA------GGCTGAGATCCTGGTGCAGG-GCCATGTAG--GGGGTC-AGGGT-AAAGAA--TGGCCCAGCAAGGCCAAATGGGCAGGACACCTGTGTGACTTT--AGACAGGGACTTGGAGGCCCAGAGCCTGG-TC-AAGAAGGTGCTCAGTAGACACTGGTGGAACTAAGACAT-GGAT---TC-----------------------------------AGGGTCCATGGATCCTCAGATCAAAGAGATT--AG--T-CAGAAACATCCAGAAGCCCTTAATAATTC i micMur3.chr1 I 116 C 0 s proCoq1.NW_012133858v1 14781614 241 - 22200726 GTGTGAGAGGG--------TAGA------GGCTGAGATCCTGGTGCAGG-GCCATGTGG--GGGGTC-AGGGT-AAAAAA--TGGCCCAGCGAGGCCAAATGGGCAGGGCACCCGTGTGGCTTT--AGACAGGGACTTGCAGgctcagggcctgg-ac-aagaaggtgctcagtagacgctggtggaactaaGACAT-GGAC---GC-----------------------------------AGGGTCCATGGATCCTCAGATCAAAGAGATC--AG--T-CAGAAACATCCAGAAGCCCTTAATAATTC i proCoq1.NW_012133858v1 I 113 C 0 s otoGar3.GL873829 191732 234 + 608964 GTATGAGAGGG--------AAGA------GGCTGAGCTCTTGGTGCAGG-GCCAGATAG--GGAATC-GGGGT-AGAGAA--TGGCTCAGGGAGATCAAACAGGCAGGACACTTATGTGGCTTT--AGACAGGGACTTGTAGGTCCATGGGCTGG-TC-AAGAAGGTGTTCAGTAGATGCTGGTGGAACTAAGACAT----------------------------------------------GGGTCTATTGATCCTCATATCTGAGAGATC--AG--G-CAGAAACAACCAGAAGCTATTAATAATTC i otoGar3.GL873829 C 0 I 581 s mm10.chr16 32775562 162 + 98207768 CTCTGAGAGAG--------GCGA------AGCTGAGAGCCTGCTACAGG-GCCAGGCGG--GGGATT-----------------------------------------------GTGTAGCTTT--GGGAAGGTACTCACAGTCTT--GGCCTGT-TC-AGGACGGT-----------GCTGGAGGGACTGAGACAG---------C-----------------------------------GGGGC-------TTCTCATGACAGAAGTGTC--AG------------GGCAGGTGGTCTT--CAGCTT i mm10.chr16 C 0 C 0 s canFam3.chr33 2307769 187 - 31377067 -------------------GTGC------GGCTGGGGTCCCAGGGCTGGCACCGGGCAG--AGCGGT-CGGGG-AGAGAA--CCGTCCAGCGAGGCC----------------CAGGGGGCTCG--GAGCAGGA----------CCACAGCGGGC-TC-----CGGCGCTCGGCACGTGCTGGCAGGATCGGGACGGGGACT----C-----------------------------------GGAGTCTGTGGGTTCCCAGGCCCGGGGTGGG--GGGCG-CAGAAACA---------------CGGTC- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2685514 264 - 6579706 GTGTGAGTGGGTTGTGAAAAAGACAGGATGGCTGGAATCCTGGTGCAGGCGCCAGATAGCTGGGGTC-AGGAT-AAAAGACCTGGCCCAGGGAGGCTGAATGAGCAGGAGGACCATGTGCCCTTTGAAACAGGGACTTGTAGGCCCCAGGAATGG-CCAAAGAAGGGGTTCAGTAGATGCTGTCTGAATTAAAACAAGGGCT----T-----------------------------------AGGGTCCCTGGATTCTCAGACCAGAGATCCC--AG--CACAGAAATGCTGAGCAGCCCTTAATGGTTC i dasNov3.JH569502 C 0 C 0 a score=121314.000000 s hg38.chr3_KI270934v1_alt 40325 9 + 163458 GGTCTCCTG s panTro5.chr3 2507042 9 - 202621043 GGTCTCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101483 9 - 190779 GGTCTCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52834 9 - 106623 GGTCTCCTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818710 9 - 123690457 GGTCTCCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325041 9 - 204787373 GGTCTCCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192390799 9 - 192460366 GGTCTCCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19129872 9 - 19675229 GGTCTCCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363470 9 - 16847902 GGTCTCCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91335794 9 + 91754291 GGTCTCCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1400829 9 + 1977891 GGTCTCCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7341942 9 - 7796314 GGTCTCCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813345 9 + 74750902 GGCTTCCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264355 9 - 17725628 GGTTTCCTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6352417 9 + 6778120 GGTTTCCTG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88371623 9 + 114275543 AACACCCTG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14781855 9 - 22200726 GGCCCCCTG i proCoq1.NW_012133858v1 C 0 I 12 s otoGar3.GL873829 192547 9 + 608964 AGCCCCCTG i otoGar3.GL873829 I 581 C 0 s mm10.chr16 32775724 3 + 98207768 ------GTG i mm10.chr16 C 0 C 0 s canFam3.chr33 2307956 9 - 31377067 GGTCTCCCG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2685778 8 - 6579706 -AGCTCCTG i dasNov3.JH569502 C 0 C 0 a score=221769.000000 s hg38.chr3_KI270934v1_alt 40334 21 + 163458 GCCGCCC-GTGATCGGCAACCC s panTro5.chr3 2507051 21 - 202621043 GCCGCCC-GTGATCGGCAACCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101492 21 - 190779 GCCGCCC-GTGATCGGCAACCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52843 21 - 106623 GCCGCCC-GTGATCGGCAACCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818719 21 - 123690457 GCCGCCC-GTGATCAGCAACCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325050 21 - 204787373 GCCGCCC-GTGATCAGCAACCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192390808 21 - 192460366 GCCGCCC-GTGATCAGCAACCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19129881 21 - 19675229 GCCGCCC-GTGATCAGCAACCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363479 21 - 16847902 GCCGCCC-ATGATCAGCAACCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91335803 21 + 91754291 GCCGCCT-GTGATCAGCAACCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1400838 21 + 1977891 GCCGCCC-GTGATCAGCAACCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7341951 21 - 7796314 GCCGCCC-GTGATCAGCAACCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813354 22 + 74750902 GCTACCCTGTGATCAGCAACCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264364 22 - 17725628 GCCGCCCTGTGATCAGCAACCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6352426 22 + 6778120 GCCTCCCTGTGATCAGCAACCC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88371632 21 + 114275543 GCTGCCCAGTGATCATCAACT- i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 192556 21 + 608964 GCTACCCAGTAATCATCAACT- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32775727 14 + 98207768 --------GACACCAGCAGCCC i mm10.chr16 C 0 I 5 s canFam3.chr33 2307965 22 - 31377067 GCTGCGCAGTAACCAGCCACCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2685786 21 - 6579706 GCCGCCCAGTGATCAGCTCCC- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14781864 12 - 22200726 I a score=2825862.000000 s hg38.chr3_KI270934v1_alt 40355 178 + 163458 TCCTCCAGGTGGCTGGCTGCAAGTGTGACGGGGGCACCTTCGGCCGCTACTGCGAGGGCTCCGAGGATGCCTGTGAGGAGCCGTGCTTCCCGAGTGTCCACTGCGTTCCTGGGAAGGGCTGCGAGGCCTGCCCTCCAAACCTGACTGGGGATGGGCGGCACTGTGCGGGTGAG----------------------------CCGGG s panTro5.chr3 2507072 178 - 202621043 TCCTCCAGGTGGCTGGCTGCAAGTGTGACGGGGGCACCTTCGGCCGCTACTGCGAGGGCTCCGAGGATGCCTGTGAGGAGCCGTGCTTCCCGAGTGTCCACTGCGTTCCTGGGAAGGGCTGCGAGGCCTGCCCTCCAAACCTGACTGGGGATGGGCGGCACTGTGCGGGTGAG----------------------------CCGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101513 178 - 190779 TCCTCCAGGTGGCTGGCTGCAAGTGTGACGGGGGCACCTTTGGCCGCTACTGCGAGGGCTCCGAGGATGCCTGTGAGGAGCCGTGCTTCCCGAGTGTCCACTGCGTTCCTGGGAAGGGCTGCGAGGCCTGCCCTCCAAACCTGACTGGGGATGGGCGGCACTGTGCGGGTGAG----------------------------CCGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52864 178 - 106623 TCCTCCAGGTGGCTGGCTGCAAGTGTGACGGGGGCACCTTCGGCCGCTACTGCGAGGGCTCCGAGGATGCCTGTGAGGAGCCGTGCTTCCCGAGTGTCCACTGCGTTCCTGGGAAGGGCTGCGAGGCCTGCCCTCCAAACCTGACTGGGGATGGGCGGCACTGTGCGGGTGAG----------------------------CCGGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818740 178 - 123690457 TCCTCCAGGTGGCTGGCTGCAAGTGTGACGGGGGCACCTTCGGCCGCTACTGCGAGCGCTCCGAGGATGCCTGTGAGGAGCCGTGCCTCCCGAGTGTCCGCTGCGTTCCTGGGAAGGGCTGCGAGGCCTGCCCTCCAAACCTGACTGGGGATGGGCGGCACTGTGCCGGTGAG----------------------------CCGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325071 178 - 204787373 TCCTCCAGATGGCCGGCTGCAAGTGTGACGGGGGCACCTTCGGCCGCTACTGCGAGCGCTCCAAGGACGCCTGTGAGGAGCCGTGCTTCCCGAGTGTCCGCTGCATTCCTGGGAAGGGCTGCGAGGCCTGCCCTCCACACCTGACTGGGGATGGACGGCACTGTGCTGGTGAG----------------------------CCGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192390829 178 - 192460366 TCCTCCAGATGGCCGGCTGCAAGTGTGACGGGGGCACCTTCGGCCGCTACTGCGAGCACTCCAAGGACGCCTGTGAGGAGCCGTGCTTCCCGAGTGTCCGCTGCATTCCTGGGAAGGGCTGCGAGGCCTGCCCTCCATACCTGACTGGGGATGGACGGCACTGTGCTGGTGAG----------------------------CCGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19129902 178 - 19675229 TCCTCCAGATGGCCGGCTGCAAGTGTGACGGGGGCACCTTCGGCCGCTACTGCGAGCGCTCCAAGGACGCCTGTGAGGAACCGTGCTTCCCGAGTGTCCGCTGCATTCCTGGGAAGGGCTGCGAGCCCTGCCCTCCACACCTGACTGGGGATGGACGGCACTGTGCTGGTGAG----------------------------CCGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363500 178 - 16847902 TCCTCCAGATGGCCGGCTGCAAGTGTGACGGGGGCACCTTCGGCCGCTACTGCCAGCGCTCCAAGGACGCCTGTGAGGAGCCGTGCTTCCCGAGTGTCCGCTGCATTCCTGGGAAGGGCTGCGAGGCCTGCCCTCCACACCTGACTGGGGATGGACGGCACTGCGCTGGTGAG----------------------------CCGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91335824 178 + 91754291 TCCTCCAGATGGCCGGCTGCAAGTGTGATGCGGGCACCTTCGGCCGCTACTGCGAGCGCTCCAAGGACGCCTGTGAGGAGCCGTGCTTCCCGAGTGTCCGCTGCATTCCTGGGAAGGGCTGCGGGGCCTGCCCTCCACACCTGACTGGGGATGGGCGGCACTGCGCTGGTGAG----------------------------CCGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1400859 178 + 1977891 TCCTCCAGATGGCCGGCTGCAAGTGTGACGGGGGCACCTTCGGCCGCTACTGCGAGCGCTCCAAGGACACCTGTGAGGAGCCGTGCTTCCCGAGTGTCCGCTGCATTCCTGGGAAGGGCTGCGAGGCCTGCCCTCCACACCTGACTGGGGATGGACGGCACTGCGCTGGTGAG----------------------------CCGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7341972 206 - 7796314 TCCTCCAGGTGGCCGGCTGCAAGTGTGACGGGGGCACCTTCGGCCGCTACTGCGAGCGCTCCAAGGACGCCTGTGAGGAGCCGTGCTTCCCGAGTGTCCGCTGCATTCCTGGAAAGGGCTGCGAGGCCTGCCCTCCACACCTGACTGGGGATGGGCGGCACTGCGCTGGTGAGCTGGGAACAGGGCCTGGAGGACGGGCTTCCGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813376 178 + 74750902 TTCTCCAGGTGGCTAGCTGCAAGTGTGACAGGGGCACCTTCGGCCACTACTGCGAGCGCTCTGCGGACGCCTGTGAGGAGCCATGCTTTCCAAATGTCAGCTGCGTTCCTGGGAAGGGCTGCGAGGCCTGCCCTCCAGACCTGACCGGGGATGGGCGGCACTGTGCCGGTGAG----------------------------CTGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264386 178 - 17725628 TTCTCCAGGTGGCTGGCTGCAAGTGTGACAGGGGCACCTTCGGCCGGTACTGCGAGCGCTCTGCGGACGCCTGTGAGGAGCCCTGCTTTCTGAATGTCAGCTGCATTCCCGGGAAGGGCTGCGAGGCCTGCCCTCCAGGCCTGACTGGGGATGGGCGGCACTGTGCTGGTGAG----------------------------CTGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6352448 178 + 6778120 TTCTCCAGGTGGCTGGCTGCAAGTGTGACAGGGGCACCTTCGGCCGCTACTGCGAGCGCTCTGCGGACGCCTGTGAGGAGCCGTGCTTTCCAAATGTCAGCTGCGTTCCTGGGAAGGGCTGTGAGGCCTGCCCTCCAGGCCTGACTGGGGATGGGCGGCACTGTGCCGGTGAG----------------------------CTGGG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88371653 178 + 114275543 TGTTCCAGATGGCTGGTTGCAAATGTGATGGGGACACCTTTGGCCTCTACTGCGAACGCTCCAAGGACCCCTGTGAGGAGCAATGCTTCCCGAATGTCAGCTGCATTCCTGGGCAGGGCTGCGAGGCCTGCCCTCCAAACCTCACTGGGGATGGGCGTCACTGTGCAGGTGAG----------------------------CTGTG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14781876 178 - 22200726 TGTTCCAGGTGGCTGGTTGCAAGTGTGACGGGGACACCTTTGGCCACTACTGCGAACGCTCCAAGGACCCCTGTGAGGAGCAGTGCTTCCCGAATGTCAGCTGCATTCCTGGGCAGGGCTGCGAGGCCTGCCCCCCAAACCTCACTGGGGATGGGCGTCACTGTGCAGGTGAG----------------------------CTGGG i proCoq1.NW_012133858v1 I 12 I 58 s otoGar3.GL873829 192577 178 + 608964 TGTTCCAGATGGCTGGCTGCGAGTGTGACAAGGATACTTTTGGCCCCTACTGCGAACACTCCAAGGACCTCTGTGAGGAGCAATGCTTCCCAGAGGTCAAATGCACTAGTGGGGTGGGCTGCGAGGCCTGCCCCCCACACCTCACTGGGGATGGGCGGCATTGTGCAGGTGAG----------------------------CTGGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32775746 178 + 98207768 TCATTCAGGTGACCAGCTGCAAGTGTGATGGGGACACCTTTGGCCGCTTGTGTGAACGCTCCAAGGACCCGTGTGATGAGCCATGCTTCCCTAACGTGAACTGCATTCCTGGGAAGGGCTGTGAGGCCTGCCCTCCAAACACAACTGGAGATGGACGTCATTGTGCAGGTGAG----------------------------TGTGG i mm10.chr16 I 5 C 0 s canFam3.chr33 2307987 176 - 31377067 -ATTCCAGGTGGCCCGCTGCAGGTGTGGCTCCAGCACCTTTGGCCACTACTGCGAGCGCTCCAGGGACCAGTGCGAGGCGCCGTGCTTCGCGGGTGTGGCCTGCGTCCCCGGGAGGGGCTGCGAGGCCTGCCCCCCGCACCTGACGGGCGACGGGCGTCACTGTGCAGGTAAG----------------------------CGGG- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2685807 178 - 6579706 CATTCCAGGTGGCCGCCTGCCAGTGTGACAGAGACACCTATGGCCGCTACTGCGAGCGCTCCAAGAGCCTCTGTGAGGAGCAGTGCTTCCCGGGTGTGAAGTGCAATCCTGGGAAGGGCTGCGAAGCCTGCCCCCTGAACACGACTGGAGACGGGCGTCACTGTGCATGTGAG----------------------------CTGGA i dasNov3.JH569502 C 0 C 0 a score=82145.000000 s hg38.chr3_KI270934v1_alt 40533 6 + 163458 AACAGG s panTro5.chr3 2507250 6 - 202621043 AACAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101691 6 - 190779 AACAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53042 6 - 106623 AACAGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818918 6 - 123690457 AACAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325249 6 - 204787373 AACAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391007 6 - 192460366 AACAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130080 6 - 19675229 AACAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363678 6 - 16847902 AACAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336002 5 + 91754291 AACA-G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401037 6 + 1977891 AACAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7342178 6 - 7796314 AACAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813554 6 + 74750902 AGCAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264564 6 - 17725628 AACAGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6352626 6 + 6778120 AACAGG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88371831 6 + 114275543 AACAGG i micMur3.chr1 C 0 I 60 s otoGar3.GL873829 192755 6 + 608964 AACAGG i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32775924 6 + 98207768 GACAGG i mm10.chr16 C 0 I 1 s canFam3.chr33 2308163 6 - 31377067 GACCTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2685985 6 - 6579706 AACGGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14782054 58 - 22200726 I a score=374686.000000 s hg38.chr3_KI270934v1_alt 40539 49 + 163458 GCCTGG-AGCAGGCGCTTCTGGGAGCAGCTGATAGCTCAAGGGTGTAGAC- s panTro5.chr3 2507256 49 - 202621043 GCCTGG-AGCAGGCGCTTCTGGGAGCAGCTGATAGCTCAAGGGTGTAGAC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101697 49 - 190779 GCCTGG-AGCAGGCGCTTCTGGGAGCAGCTGATAGCTCAAGGGTGTAGAC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53048 49 - 106623 GCCTGG-AGCAAGCGCTTCTGGGAGCAGCTGATAGCTCAAGGGTGTAGAC- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818924 49 - 123690457 GCCTGG-AGGAGGCACTTCTGGGAGCAGCTGACAGCTCAAGGGTGTAGAC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325255 49 - 204787373 GCCTGG-AGGAGGGACTTCTGGGAGCAGCTCACAGCTCAAGGGTGTGGAC- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391013 49 - 192460366 GCCTGG-AGGAGGGACTTCTGGGAGCAGCTCACAGCTCAAGGGTGTGGAC- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130086 49 - 19675229 GCCTGG-AGGAGGGACTGCTGGGAGCAGCTCACAGCTCAAGGGTGTGGAC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363684 49 - 16847902 GCCTGG-AGGAGGGGCTTCTGGGAGCAGCTCACAGCTCAAGGGTGTGGAC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336007 49 + 91754291 GCCTGG-AGGAGGGGCTTCTGGGAGCAGCTCACAGCTCAAGGCTGTAGAC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401043 49 + 1977891 GCCTGG-AGGAGGGGCTTCTGGGAGCAGCTCACAGCTCAAGGGTGTGGAC- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7342184 49 - 7796314 GCCTGG-AGGAGGGGCATCTGGGAGCAGCTCATAGCTCAAGGGTGTAGAC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813560 49 + 74750902 GCCTGG-AGGAGGGACATCTGGGGACAGGTGGTAGCTCAAGTGTGGTGAC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264570 47 - 17725628 GCCTGG-AGGAGGGGCTTC-GGCGACAGCTGGTAGCTC-AGTGTGGAGAT- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6352632 48 + 6778120 GCCTGG-AGGAGGGGCTTC-GGGGACAGGTGGTAGCTCAAGTGTGGAGAC- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 192762 49 + 608964 CCCTGGCAGGAGAAGGTTC-AAGGACAGGTGACACTTCAAAGGTCTAAGA- i otoGar3.GL873829 I 1 I 1 s mm10.chr16 32775931 41 + 98207768 CCCTGGCAAGAGGAGGTCC-------AGGTGATTGGTCAAGGGTCCTG--- i mm10.chr16 I 1 C 0 s canFam3.chr33 2308169 48 - 31377067 CCCTGGCAGGAGCACGGCCTGGGGACAGTTGACACCGGGAGGGCCTGG--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2685991 42 - 6579706 TCCTAG-AGGGA--------GGAGACAGGTGGCTCCCTGAGGAACTGGGAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14782054 58 - 22200726 I e micMur3.chr1 88371837 60 + 114275543 I a score=400851.000000 s hg38.chr3_KI270934v1_alt 40588 33 + 163458 AGCCAAAGGCAAACCATTTCTCTCCTTTTTCCA s panTro5.chr3 2507305 33 - 202621043 GGCCAAAGGCAAACCATTTCTCTCCTTTTTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101746 33 - 190779 AGCCAAAGGCAAACCATTTCTCTCCTTTTTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53097 33 - 106623 AGCCAAAGGCAAACCATTTCTCTCCTTCTTCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2818973 33 - 123690457 AGCCAAAGGCAAACCATTTCTCTCCTTTTTCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325304 33 - 204787373 AGCCAAAGGCAAACCATTTCTCTCCCTTCTCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391062 33 - 192460366 AGCCAAAGGCAAACTATTTCTCTCCCTTCTCCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130135 33 - 19675229 AGCCAAAGGCAAACTAGTTCTCTCCCTTCTCCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363733 33 - 16847902 ACCCAAAGGCAAACTATTTCTCTCCCTTCTCCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336056 32 + 91754291 A-CCAAAGGCAAACCATTTCCCTCCCTTTTCCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401092 33 + 1977891 AGCCAAAGGCAAACTATTTCTCTCCCTTCTCCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7342233 33 - 7796314 AGCCAAAGGCAAACCATTTCTCTCCCTTTTCCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813609 33 + 74750902 AGCCACAGGTAATCTCTTTCTCTCCCTTTTCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264617 33 - 17725628 CGCCAAAGGCTGTCCCTTTCTCTCCCTTTTCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6352680 33 + 6778120 AGCCAAAGGCAGTCCCTTTCTCTCCCATTTCCA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88371897 33 + 114275543 AGCCAAAGGCAAACCATTTCTCTCCCTATTCCA i micMur3.chr1 I 60 C 0 s proCoq1.NW_012133858v1 14782112 33 - 22200726 AGCCAAAGGCAAACCCTTTCTCTCCCTATTCCA i proCoq1.NW_012133858v1 I 58 C 0 s otoGar3.GL873829 192812 33 + 608964 AGTGAAAGGCAAACCATTTCTCTCCCTGTTCCA i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32775972 18 + 98207768 ---------------GTGTTTCTGTCTTTAGCA i mm10.chr16 C 0 C 0 s canFam3.chr33 2308217 32 - 31377067 GGCCTGGGACCAACC-TTTGTCTCCCTTCTCCA i canFam3.chr33 C 0 I 151 s dasNov3.JH569502 2686033 31 - 6579706 AGTCA-ACACAAAC-ATTTCTCTCCCTTTTCCA i dasNov3.JH569502 C 0 C 0 a score=16511.000000 s hg38.chr3_KI270934v1_alt 40621 1 + 163458 G s panTro5.chr3 2507338 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101779 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53130 1 - 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819006 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325337 1 - 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391095 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130168 1 - 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363766 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336088 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401125 1 + 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7342266 1 - 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813642 1 + 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264650 1 - 17725628 G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6352713 1 + 6778120 G i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88371930 1 + 114275543 G i micMur3.chr1 C 0 I 41 s proCoq1.NW_012133858v1 14782145 1 - 22200726 G i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 192845 1 + 608964 G i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32775990 1 + 98207768 A i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2686064 1 - 6579706 G i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 2308249 151 - 31377067 I a score=136889.000000 s hg38.chr3_KI270934v1_alt 40622 19 + 163458 CAGATCTTTAGAATGCTC-------------A s panTro5.chr3 2507339 19 - 202621043 CAGATCTTTAGAATGCTC-------------A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101780 19 - 190779 CAGATCTTTAGAATGCTC-------------A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53131 19 - 106623 CAGATCTTTAGAATGCTC-------------A i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819007 19 - 123690457 CAAATCTTTAGAATGCTC-------------A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325338 32 - 204787373 CAAGCCTTTAGAATGCGCAATCTAGGTAGGTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391096 32 - 192460366 CAAGCCTTTAGAATGCACAATCTAGGTAGGTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130169 32 - 19675229 CAAGCCTTTAGAATGCACAATCTAGGTAGGTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363767 32 - 16847902 CAAGCCTTTAGAATGTGCAATCTAGGTAGGTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336089 32 + 91754291 CAAGCCTTTAGAATGCTCAATCTAGGTAGGTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401126 32 + 1977891 CAAGCCTTTAGAATGCGCAATCTAGGTAGGTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7342267 32 - 7796314 CAAGCCTTTAGAATGCTCAATCTAGGTAGGTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813643 18 + 74750902 CAAG-CCTTAGAATGCTC-------------A i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264651 17 - 17725628 TACG--CTCAGAATGCTC-------------A i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6352714 18 + 6778120 CAAG-CCTTAGAACGCCC-------------A i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14782146 19 - 22200726 AAAATCTTTACAACGCTC-------------A i proCoq1.NW_012133858v1 C 0 I 26 s otoGar3.GL873829 192846 19 + 608964 CAAGTCTTTAGAATGCTC-------------A i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32775991 16 + 98207768 TGTGTCTTTTAC---CTC-------------A i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2686065 19 - 6579706 CAAGTCTTTAGAATGCTC-------------A i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88371931 41 + 114275543 I e canFam3.chr33 2308249 151 - 31377067 I a score=46133.000000 s hg38.chr3_KI270934v1_alt 40641 42 + 163458 ATCTAGGCAGGTGT---------------------------------------------------------GGGAAATCTAGGCAGGTGTGGGAAATCA s panTro5.chr3 2507358 30 - 202621043 ATCTAGGCAGGTGT---------------------------------------------------------GGGAAATCTAGGCAGG------------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101799 30 - 190779 ATCTAGGCAGGTGT---------------------------------------------------------GGGAAATCTAGGCAGG------------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53150 30 - 106623 ATCTAGGCAGGTAT---------------------------------------------------------GGGAAATCTAGGCAGG------------ i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819026 30 - 123690457 ATCTAGGCAGGTAT---------------------------------------------------------GGGAAATCTAGGCAGG------------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325370 49 - 204787373 ATCTAGGCAGGTACGGGAAATCTAGGCAGGTAC--------------------------------------GGGAAATCTAGGCAGG------------ i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391128 49 - 192460366 ATCTAGGCAGGTATGGGAAATCTAGGCAGGTAC--------------------------------------GGGAAATCTAGGCAGG------------ i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130201 87 - 19675229 ATCTAGGCAGGTACGGGAAATCTAGGCAGGTACGGGAAATCTAGGCAGGTATGGGAAATCTAGGCAGGTATGGGAAATCTAGGCAGG------------ i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363799 30 - 16847902 ATCTAGGCAGGTAC---------------------------------------------------------GGGAAATCTAGGCAGG------------ i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336121 30 + 91754291 ATCTAGGCAGGTAT---------------------------------------------------------GGGAAATGTAGGCAGG------------ i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401158 30 + 1977891 ATCTAGGCAGGTAT---------------------------------------------------------GGGAAATCTAGGCAGG------------ i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7342299 22 - 7796314 ATCTAGGCAGGTAT---------------------------------------------------------GGGAAATC-------------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813661 8 + 74750902 GTCTAGGT------------------------------------------------------------------------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264668 8 - 17725628 GGCTAGGT------------------------------------------------------------------------------------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6352732 8 + 6778120 GTCTAGGT------------------------------------------------------------------------------------------- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 192865 16 + 608964 GTATAGATGGGTAT---------------------------------------------------------GG-------------------------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32776007 15 + 98207768 TGATAAGAAGCTGT---------------------------------------------------------A--------------------------- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2686084 17 - 6579706 CTATAGGTGGGTGG---------------------------------------------------------GGG------------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14782165 26 - 22200726 I e micMur3.chr1 88371931 41 + 114275543 I e canFam3.chr33 2308249 151 - 31377067 I a score=15152.000000 s hg38.chr3_KI270934v1_alt 40683 27 + 163458 TCTAGGCAGGTATGGGAAATCTAGGCA s rheMac8.chr2 2325419 17 - 204787373 ----------TACGGGAAATCTAGGTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391177 17 - 192460366 ----------TACGGGAAATCTAGGTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130288 17 - 19675229 ----------TACGGGAAATCTAGGTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363829 17 - 16847902 ----------TACGGGAAATCTAGGTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336151 17 + 91754291 ----------TATGGGAAATCTAGGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401188 17 + 1977891 ----------TACGGGAAATCTAGGTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7342321 10 - 7796314 -----------------AATCTAGGTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813669 20 + 74750902 -------CAGTATGGGAAATGTAGGTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264676 20 - 17725628 -------AGGTATGGGAAATGTAGGCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6352740 1 + 6778120 --------------------------A i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 64 27 + 69927 TCTGGGTAGGTATGGGAAATGTAGGTA i aotNan1.NW_018503669v1 N 0 C 0 s otoGar3.GL873829 192881 7 + 608964 ------------CAAGGAA-------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32776022 8 + 98207768 -----------ATGGGGGA-------- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2686101 6 - 6579706 ------------TAGGAG--------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14782165 26 - 22200726 I e micMur3.chr1 88371931 41 + 114275543 I e canFam3.chr33 2308249 151 - 31377067 I e nomLeu3.chr11 2819056 0 - 123690457 C e gorGor5.CYUI01000576v1 53180 0 - 106623 C e panPan2.chrUn_NW_014024201v1 101829 0 - 190779 C e panTro5.chr3 2507388 0 - 202621043 C a score=39617.000000 s hg38.chr3_KI270934v1_alt 40710 4 + 163458 GGCC s panTro5.chr3 2507388 2 - 202621043 --CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101829 2 - 190779 --CC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53180 2 - 106623 --CC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819056 2 - 123690457 --CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325436 4 - 204787373 GGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391194 4 - 192460366 GGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130305 4 - 19675229 GGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363846 4 - 16847902 GGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336168 4 + 91754291 GGTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401205 4 + 1977891 GGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7342331 4 - 7796314 GGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813689 4 + 74750902 GGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264696 4 - 17725628 GGCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6352741 4 + 6778120 GGCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 91 4 + 69927 GGCT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88371972 4 + 114275543 GGCT i micMur3.chr1 I 41 C 0 s otoGar3.GL873829 192888 4 + 608964 GGCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32776030 4 + 98207768 GGAC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2686107 4 - 6579706 GGCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14782165 26 - 22200726 I e canFam3.chr33 2308249 151 - 31377067 I a score=623175.000000 s hg38.chr3_KI270934v1_alt 40714 43 + 163458 TGGAAAGGGGGTGGTGGATGGTGTGGGGCTGAAGGAGAAGAGG s panTro5.chr3 2507390 43 - 202621043 TGGAAAGGGGGTGGTGGATGGTGTGGGGCTGAAGGAGAAGAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101831 43 - 190779 TGGAAAGGGGGTGGTGGATGGTGTGGGGCTGAAGGAGAAGAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53182 43 - 106623 TGGAAAGGCGGTGGTGGATGGTGTGGGGCTGGCGGAGAAGAGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819058 43 - 123690457 TGGAAAGGGGGTGGTGGATGGTGTGGGGCTGAAGGAGAAGAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325440 40 - 204787373 TGGAAAGGGGGTG---GATGGTGTGGTGCTGAAGGAGAAGAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391198 43 - 192460366 TGGAAAGGGGGTGGCAGATGGTGTGGTGCTGAAGGAGAAGAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130309 43 - 19675229 TGGAAAGGGGGTGGCAGATGGTGTGGTGCTGAAAGAGAAGAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363850 40 - 16847902 TGGAAAGGGGGTG---GATGGTGTGGTGCTGAAGGAGAAGAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336172 43 + 91754291 TGGAAAGGGGGTGGCAGAGGGTGTGGTGCTGAAGGAGAAGAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401209 40 + 1977891 TGGAAAGGGGGTG---GATGGTGTGGTGCTGAAGGAGAAGAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7342335 43 - 7796314 TGGAAAGGGGGTGGTGGATGGTGTGGTGCTGAAGGAGAAGAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813693 43 + 74750902 TGAAAAGGGGGTGGTAGGTGGTGTGGGGCTGAAGGAAAAGAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264700 43 - 17725628 TGGAAAGGGGGTGGCAGATGGTGTGGGGCTGAAGGAGAAGAGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6352745 43 + 6778120 TGGAAAGCGGGTGGTAGATGGTGTGGGGCTGAAGGAGAAGAGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 95 43 + 69927 GGGAAACGGGGTGGTGGATGGTGTGGGGCTGAAGGAGAAGAGG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88371976 43 + 114275543 TGGAAAGGGGGTGGTGGATGGTGTGGGGCTGAAGGATAAGAGG i micMur3.chr1 C 0 I 132 s proCoq1.NW_012133858v1 14782191 40 - 22200726 TGGAAAGGGGGTGGTGGATGGTGTGGGGCTGAAGGAGAAG--- i proCoq1.NW_012133858v1 I 26 C 0 s otoGar3.GL873829 192892 31 + 608964 -----------TGGTGGAC-ATGTGGGGCTGAAGGAGAAGAGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32776034 41 + 98207768 TTAGAAAGGGGTGGGAGGTAGTGTGGGGATGCAGGAGAGGA-- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2686111 42 - 6579706 TGGAAATAGGGTGGCAGATGATGTGGGGCTGT-GGAGAAGAGG i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 2308249 151 - 31377067 I a score=1529859.000000 s hg38.chr3_KI270934v1_alt 40757 145 + 163458 TTGTACAGGCATAGGGGAGGGGACGGGGCT-GGGCATCCCTGAGGCATTGATGGGGGGAGCCCCGGGCGAAAGACTGAAGATGGTTT-----------------GGGGAGGAGACTT-CAGCAGCCGCCAGAGAACC--GG--GCAAGCTG-GGTCCTCGGGATCCCTG s panTro5.chr3 2507433 145 - 202621043 TTGTACAGGCATAGGGGAGGGGACGGGGCT-GGGCATCCCTGAGGCATTGATGGGGGAAGCCCGGGGCGAAAGACTGAAGATGGTTT-----------------GGGGAGGAGACTT-CAGCAGCCGCCAGGGAACC--GG--GCAAGCTG-GGTCCTCGGGATCCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101874 145 - 190779 TTGTACAGGCATAGGGGAGGGGACGGGGCT-GGGCATCCCTGAGGCATTGATGGGGGGAGCCCCGGGCGAAAGACTGAAGATGGTTT-----------------GGGGAGGAGACTT-CAGCAGCCGCCAGGGAACC--GG--GCAAGCTG-GGTCCTCGGGATCCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53225 145 - 106623 TTGTACAGGCATAGGGGAGGCGACGGGGCT-GGGCATCCCTGAGGCATTGATGGGGGGAGCCCCGGACGAAAGACTGAAGATGGTTT-----------------GGGGAGGAGACTT-CAGCAGCCGCCAGGGAACC--GG--GCAAGCTG-GGTCCTCGGGATCCCTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819101 140 - 123690457 TTGTACAGGCATAGCGGAGGGGACGGGGCT-GAGCATCCCTGAGGCATTGATGGGGGGAACCCCGGGCAAAAGACTGAAGATGGTTTGGCC------------AGGGGAGGAGACTT-CAGCAGCT-CCAGGGAACC--GG--GCAAGCTG-GGTCCTCG--------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325480 150 - 204787373 TTGTACAGGCATAGGGGAGGGGACGGGGCT-AAGCATCCCTGAGGCATTGATGGGGGAAACCCTGGGCAAAAGACTGAAGATGGTCTGCCC------------AGGGGAGGAGACTT-CAGCAGCGGCCAGGGAACC--GG--GCAAGCTG-GCTCCTCGGGCTCCCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391241 150 - 192460366 TTGTACAGGCATAGGGGAGGGGACGGGGCT-AAGCATCCCTGAGGCATTGATGGGGGAAACCCTGGGCAAAAGACTGAAGATGGTCTGCCC------------AGGGGAGGAGACTT-CAGCAGCGGCCAGGGAACC--GG--GCAAGCTG-GCTCCTCGGGCTCCCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130352 150 - 19675229 TTGTACAGGCATAGGGGAGGGGACGGGGCT-AAGCATCCCTGAGGCATTGATGGGGGAAACCCTGGGCAAAAGACTGAAGATGGTCTGCCC------------AGGGGAGGAGACTT-CAGCAGCGGCCAGGGAACC--GG--GCAAGCTG-GCTCCTCGGGCTCCCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16363890 150 - 16847902 TTGTACAGGTATAGGGGAGGGGACGGGGCT-AAGCATCCCTGAGGCATTGATGGGGGAAACCCTGGGCAAAAGACTGAAGATGGTCTGCCC------------AGGGGAGGAGACTT-CAGCAGCGGCCAGGGAACC--GG--GCAAGCTG-GCTCCTCGGGCTCCCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336215 150 + 91754291 TTGTACAGGCATAGGGGAGGGGACGGGGCT-GAGCATCCCTGAGGCATTGATGGGGGACACCCTGGGCAAAAGACTGAAGATGGTCTGCCC------------AGGGGAGGAGACTT-CAGCAGCGGTCAGGGAACT--GG--GCAAGCTG-CCTCCTCGGGCACCTTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401249 150 + 1977891 TTGTACAGGCATAGGGGAGGGGACGGGGCT-AAAAATCCCTGAGGCATTGATGGGGGAAACCCTGGGCAAAAGACTGAAGATGGTCTGCCC------------AGGGGAGGAGACTT-CAGCAGCGGCCAGGGAACC--GG--GCAAGCTG-GCTCCTCGGGCTCCCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7342378 149 - 7796314 TTGTACAGGCACAGGGGAGGGGACAGGGCT-GAGCATCCCTGAGGCATTGACGGGGGAAACCCTGGGCAAAAGACTGAAGGTGGTCTGCCC------------AGGGGAGGAGACTT-CAGCAGCGGCCAGGGAACC--GG--GCAGGCTG-GGTCCTCGGGCTCCCT- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813736 147 + 74750902 TTGTACAGGCACAGGGGAGGGGATAGCACT-CAGCATCCCTGAGACATTAATGGGGAAAACCCCAGGCAAAAGACCGAAGATGATCTGGTG------------AAAAGAGGAGACTT-CAG---TGGCCCGCGAACC--GG--GAAAGCTG-GGTCCTCGGGCTCTCTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264743 135 - 17725628 TTGTACAGGCACAGGGGCGGGGACAGCACT-CAGCATCCCTGAGACATTGATGGGG------------AAAAGACTGAAGATGGTCTGGTG------------AAGAGAGGGGACTT-CAG---CGGCCAGCGAACC--GG--GAAAGCTG-GGTCCTTGGGCTCCCTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6352788 145 + 6778120 TGGTACAGGCACAGGGGAGGGGACAGTGCT-CAGCGCCCCCGAGACATTGATGGGGAAAACCCCAGGCCAAAG--TGAAGATGGGGCGGTG------------AAGAGAGGAGACTT-CAG---CGGCCAGCGAACC--AG--GAAAGCTG-GGTCCTCAGGCTCCCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 138 146 + 69927 TTGTACAGGCACAGGGGAGGGGACAGCGCT-CAGCATCCCTGAGGCATTGATGGGGAAAACCCCAGGCACAAGACTGAAGATGGTCTGGTG------------AAGAGACGAGACTT-CAG----GGCCAGCGAACC--GG--GAAAGCGG-GGTCCTCGGGCTCCCTG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14782231 147 - 22200726 ------AGGCACAGGGGAGGGGACAGGGCA-GAGCACCCCTGAGGCACTGATGGGGAAAACACAGGGAAAAAGACTGAAGATGGTCTGGAG------------AGGGGAGGGGCTTC-CAGCAGCAGCCAGGGAACCCGGG--GCAAGCTGGGGCCGTCGGGCTCCTCA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 192923 144 + 608964 ---------CACAGGGGAAGGGACAGGGCA-GAGCAGCCCTGAAGCACTGATGGGGACAACCCAGGT-AAAAGCCCAAAGGTGGTCTGAAG-----------AAGGGAAGAGGCTTC-TAGCAGCATCCCAGGAACCCTAG--GCAAGCTGAGGCTCTCAGGCTCCTCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32776075 120 + 98207768 ---TGCAGAAGCCGAGGATGAGCCTGGACCAGAGCAGCCTCAAGACCCTGCTGGAGAAAACATAGGG--AAAGACTGAT------------------------GGATAAGGCTAATT-GATCAG---------------AG--GCTAGCTA-GGCTCTCAGGTACCTG- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2686153 164 - 6579706 TTGTACAGGCATAGAGGAGGGTCCGGGGAA-GAGCAGCTGGAAGCAGCTG--GAAGCAAACTCAGGACAAAAGACCTGAGAAGGGGTGGACTGGGAGGAGAAGGGAAGAGGAGACTTCCAGCGGTGGCCTCGGAACC--AGAAGCAAGCTGGGGCTCGCAGGCTGCTCA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88372019 132 + 114275543 I e canFam3.chr33 2308249 151 - 31377067 I a score=1536835.000000 s hg38.chr3_KI270934v1_alt 40902 114 + 163458 GGGATCTTCAGAGACACGAGGCTCAGGATCTCTGCATCTCACGAGTCAGGACGTTTGGAGGGGCTGGCGTGGGGATCCGGCAGCAAAGGTGCCTGATTTTCCCTTTGAGTCCTC s panTro5.chr3 2507578 114 - 202621043 GGGATCTTCAGAGACACGAGGCTCAGGATCTCTGCATCTCACGAGTCAGGACGTTTGGAGGGGCTGGCGTGGGGATCCGGCAGCAAAGGTGCCTGATTTTCCCTTTGAGTCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102019 114 - 190779 GGGATCTTCAGAGACACGAGGCTCAGGATCTCTGCATCTCACGAGTCAGGACGTTTGGAGGGGCTGGCGTGGGGATCCGGCAGCAAAGGTGCCTGATTTTCCCTTTGAGTCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53370 114 - 106623 GGGATCTTCAGAGACACGAGGCTCAGGATCTCTGCATCTCATGAGTCAGGACGTTTGGAGGGGCTGGCGTGGGGATCCGGCAGCAAAGGTGCCTGATTTTCCCTTTGAGTCCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819241 46 - 123690457 --------------------------------------------------------------------GTGGGGATCCGGCAGCAAAGGTGCCTGATTTTCCCTTTGAGTCTTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325630 114 - 204787373 GGGGTCTTCAGAGACACGAGGCCCAGGATCTCTGCGTCTCACAAGTCAGGACGTTTGGAGGGGCTGGCGTGGGGATCCGGCAGCAAAGGTGCCTGATTTTCCCTTTGAGTCCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391391 114 - 192460366 GGGGTCTTCAGAGACACGAGGCCCAGGATCTCTGCATCTCACAAGTCAGGACGTTTGGAGGGGCTGGCGTGGGGATCCGGCAGCAAAGGTGCCTGATTTTCCCTTTGAGTCCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130502 114 - 19675229 GGGGTCTTCAGAGACACGAGGCCCAGGATCTCTGCATCTCACAAGTCAGGACGTTTGGAGGGGCTGGCGTGGGGATCCGGCAGCAAAGGTGCCTGATTTTCCCTTTGAGTCCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16364040 114 - 16847902 GGGGTCTTCAGAGACACGAGGCCCAGGGTCTCTGCATCTCACAAGTCAGGACGTTTGGAGGGGCTGGTGTGGGGATCTGGCAGCAAAGGTGCCTGATTTTCCCTTTGTGTCCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336365 114 + 91754291 GGGGTCTTCAGAGACACGAGGCCCAGGATCTCTGCATCTCACAAGTCAGGACGTTTGGAGGGGCTGGCGTGGGGATCCGGCAGCAAAGGTGCCTGATTTTCCCTTTGAGTCCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401399 114 + 1977891 GGGGTCTTCAGAGACACGAGGCCCAGGATCTCTGCATCTCACGAGTCAGGACGTTTGGAGGGGCTGGTGTGGGGATCTGGCAGCAAAGGTGCCTGATTTTCCGTTTGAGTCCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7342527 114 - 7796314 GGGGTCTTCAGAGACACGAGGCCCAGGATCTCTGCATCTCACAAGTCAGGATGTTTGGAGGGGCTGGCGTGGGGATCTGGCAGCAAAGCTGCCTGATTTTCCCTTTGAGTCCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813883 113 + 74750902 GGCGTCTTCAGAGACACGGGGCCCAGG-TCTCTGCATCTCACAAATCAGGACATTTGTGGGTGCTGGCACAGGGATCCAGCAGTAAAGGTGCCTCATTTTCCCTTTGAGTCCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264878 112 - 17725628 GGCGTCTTCAGAGACGGGAGGCCCAGG-TCTCTGCATCTCACAAATCAGGACATTTGGGGGTGCTGGCATGGGGACCCAGCAGT-AAGGTGCCTGATTTTCCCTTTGAGTCCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6352933 113 + 6778120 GGCGTCTTCAGAGACACGAGGCCCAGG-TCTCTGCATCTCACAAATCAGGACATTTGGGGGTACTGGCACGGGGATCCAGCAGTAAAGGTACCTGATTTTCCCTTTGAGTCCTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 284 113 + 69927 GGCGTCTTCAGAGACACGAGGCCTGGG-TCTCTGCATCTCACAAATCAGGACATTTGGGGGTGCTGGCACGGGGATCCAGCAGTAAAGGTGCCTGATTTTCCCTTTGAGTCCTC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88372151 114 + 114275543 GGGGTCTTCAGACACAGGAGGCCCAGGGTCTCTGCATCTCACAAGTCAGGACATTTGGAGGAACCACCATGGGGATCTGCAGGCAAAGGTGCCTCATTTTCCCTTTGAGCCCTC i micMur3.chr1 I 132 I 2 s proCoq1.NW_012133858v1 14782378 113 - 22200726 -GGGTCTTCAGGGACAGGAGGCCCAGGGTCTCTGCATCTCACAAGTCAGGACATTTGGAGGAACAGCCATGGGGATCTGGAGGCAAAGGTGCCTCATTTTCCCTTTGAGCCCTC i proCoq1.NW_012133858v1 C 0 I 66 s otoGar3.GL873829 193067 114 + 608964 GGTGTCTCCAGAGACATGAGGCCCAGGGTCTCTGCTTCTCACAAGTCAGGACATTTAGAGGAAATTCCATGGGGATCTGGCAGCAAAGGTGCCTCATTTTCCTTTTATGCTCTC i otoGar3.GL873829 C 0 I 2 s mm10.chr16 32776195 106 + 98207768 GGCATCTTCAGAAACACGGTGCTCAGGGGCTCTGCCTTTGACAAGTTGGAGAATCTGGAGGTGTTGCTATGGGGACCT--------CGGAACCTCAGTTTTCCTTTGGGTTCTT i mm10.chr16 C 0 I 2 s dasNov3.JH569502 2686317 101 - 6579706 GGGGTCTTCCTCT--------CTCACAGTCTTTATACCTCACAACTCGGGACGTCTGGAGGTGCTGCCATGGGGG-CCGGTGGCAGAAGCTCCTCGTTTCC----TGAGTCCTC i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 2308249 151 - 31377067 I a score=149100.000000 s hg38.chr3_KI270934v1_alt 41016 10 + 163458 ---CCAGCCATCT s panTro5.chr3 2507692 10 - 202621043 ---CCAGCCATCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102133 10 - 190779 ---CCAGCCATCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53484 10 - 106623 ---CCAGCCATCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819287 10 - 123690457 ---CCAGCCATCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325744 10 - 204787373 ---CCAGCCACCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391505 10 - 192460366 ---CCAGCCACCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130616 10 - 19675229 ---CCAGCCACCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16364154 10 - 16847902 ---CCAGCCATCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336479 10 + 91754291 ---CCAGCCACCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401513 10 + 1977891 ---CCAGCCATCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7342641 10 - 7796314 ---CCAGCCATCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73813996 10 + 74750902 ---CCAGCCATCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17264990 10 - 17725628 ---CCCGCCATCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353046 10 + 6778120 ---CCAGCCATCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 397 10 + 69927 ---CCAGCCATCT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88372267 10 + 114275543 ---CCAGCCATCT i micMur3.chr1 I 2 I 54 s otoGar3.GL873829 193183 10 + 608964 ---CCTGCCATCT i otoGar3.GL873829 I 2 C 0 s mm10.chr16 32776303 10 + 98207768 ---CTATGCGTCT i mm10.chr16 I 2 C 0 s dasNov3.JH569502 2686418 13 - 6579706 CTCCCAGCCCTCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14782491 66 - 22200726 I e canFam3.chr33 2308249 151 - 31377067 I a score=823950.000000 s hg38.chr3_KI270934v1_alt 41026 74 + 163458 GTTCCTCCCGCTCTGAGTCACCAGAGTC---TGATGAGGGAGATCACAGCGAGGCCTTTACCAAGCCCCCTAAGGCA s panTro5.chr3 2507702 74 - 202621043 GTTCCTCCCGCTCTGAGCCACCAGAGTC---TGATGAGGGAGATCACAGCGAGGCCTTTACCAAGCCCCCTAAGGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102143 74 - 190779 GTTCCTCCCGCTCTGAGCCACCAGAGTC---TGATGAGGGAGATCACAGCGAGGCCTTTACCAAGCCCCCTAAGGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53494 74 - 106623 GTTCCTCCCGCTCTGAGCCACCAGAGTC---TGATGAGGGAGATCACAGCGAGGCCTTTACCAAGCCCCCTAAGGCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819297 74 - 123690457 GTTCCTCCCGCTCTGAGCCACCAGAGTC---TGATGAGGGAGATCACAGCGAGGCCTTTACCAAGCCCCCTAAGGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325754 74 - 204787373 GTTCCTCCCGCTCTGAGCCATCAGAGTC---TGATGAGGGAGATCACAGCAAGGCCTTTACCAAGCCCCCTTAGGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391515 74 - 192460366 GTTCCTCCCGCTCTGAGCCATCAGAGTC---TGATGAGGGAGATCACAGCAAGGCCTTTACCAAGCCCCCTTAGGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130626 74 - 19675229 GTTCCTCCCGCTCTGAGCCATCAGAGTC---TGATGAGGGAGATCACAGCAAGGCCTTTACCAAGCCCCCTTAGGCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16364164 74 - 16847902 GTTCCTCCCGCTCTGAGCCATCAGAGTC---TGATGAGGGAGATCAGAGCAAGGCCTTTACCAAGCCCCCTTAGGCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336489 74 + 91754291 GTTCCTCCCGCTCCGAGCCACCAGAGTC---TGATGAGGGAGATCACAGCAAGGCCTTTACCAAGCCCCCTTAGGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401523 74 + 1977891 GTTCCTCCCGCTCTGAGCCATCAGAGTC---TGATGAGGGAGATCACAGCAAGGCCTTTACCAAGCCCCCTTAGGCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7342651 74 - 7796314 GTTCCTCCCGCTCTGAGCCATCAGAGTC---TGATGAGGGAGATCACAGCAAGGCCTTTACCAAGCCCCCTTAGGCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814006 57 + 74750902 GTCCCTCCCG-----------------C---TGATGAGGGAGGTCACAGGGAGGCCTTTACCAAGCCCCCTAAGGCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265000 73 - 17725628 GTCCCTCCCGCTCTGAGCCACCATAGTC---TGATGAGGGAGATCA-AGTGAGGCCTTTACCCAGCCCCCTAAGGCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353056 73 + 6778120 GTCCCTCCCGCTCTGAGCCACCAGAGTC---TGACGAGGGAGATCACAGTGAGGCCTTTACCCAG-CCCCTAAGGCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 407 74 + 69927 GTCCCTCCCGCTCTGAGCCACCAGAGTC---TGATGAGGGAGATCACAGGGAGGCCCTTACCAAGCCCCCTAAGGCA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 193193 50 + 608964 ---CCTCTCCCTCTGAGCCACTGGAG-----------------TCACAGTGAAGCTTCCATCAAGTCCCC------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32776313 73 + 98207768 GCTCCTCTTCCTCTGAGCCAGTGTTGTC--ACCATGACAGAGGTGACAGTGCAACCTTT--CCAATCCTCTAAGGCT i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2686431 73 - 6579706 GTTCCCCCACTTCCGAGCCACGGAGGCCTGCTGATGAGGGAGGTGACAGAGAGGC-TCCACCAAGCCCC---AGGCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14782491 66 - 22200726 I e micMur3.chr1 88372277 54 + 114275543 I e canFam3.chr33 2308249 151 - 31377067 I a score=1194623.000000 s hg38.chr3_KI270934v1_alt 41100 88 + 163458 CCCAAATAAAATCTACAGATCACTGTGCCTTCAGAGCCGAGGCCAGAGTGGGTAGAACCGCAGCTTTTATAAAGGCAGAAAAGGAGAT s panTro5.chr3 2507776 88 - 202621043 CCCAAATAAAATCTACAGATCACTGTGCCTTCAGAGCCGAGGCCAGAGTGGGTAGAACCGCAGCTTTTATAAAGGCAGAAAAGGAGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102217 88 - 190779 CCCAAATAAAATCTACAGATCACTGTGCCTTCAGAGCCGAGGCCAGAGTGGGTAGAACCGCAGCTTTTATAAAGGCAGAAAAGGAGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53568 88 - 106623 CCCAAATAAAATCTACAGATCACTGTGCCTTCAGAGCCGAGGCCAGAGTGGGTAGAACTGCAGCTTTTATAAAGGCAGAAAAGGAGAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819371 86 - 123690457 CCCAAATAAAATCTACAGATCACTGCG--TTCAGAGCCGAGGCCAGAGTGGGTAGAACCGCAGCTGTTATAAAGGCAGAAAAGGAGAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325828 88 - 204787373 CCCAAATAAAATCTAGAGGTCACTGTGCCTTCAGAGCCGAGGCCAGAGTGGGTAGAACCACAGATTTTATAAACGCAGAAGAGGAGAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391589 88 - 192460366 CCCAAATAAAATCTAGAGGTCACTGTGCCTTCAGAGCCGAGGCCAGAGTGGGTAGAACCACAGATTTTATAAACGCAGAAGAGGAGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130700 88 - 19675229 CCCAAATAAAATCTAGAGGTCACTGTGCCTTCAGAGCCGAGGCCAGAGTGGGTAGAACCACAGATTTTATAAACGCAGAAGAGGAGAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16364238 88 - 16847902 CCCAAATAAAATCTAGAGATCACTGTGCCTTCAGAGCCGAGGCCAGAGTGGGTAGAACCACAGATTTTATAAACGCAGAAGAGGAGAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336563 88 + 91754291 CCCAAATAAAATCTAGAGATCACTGTGCCTTCAGAGCCGAGGCCAGAGTGGGTAGAACCACAGATTCTATAAATGCAGAAGAGGAGAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401597 88 + 1977891 CCCAAATAAAATCTAGAGATCACTGTGCCTTCAGAGCCGAGGCCAGAGTGGGTAGAACCACAGATTTTATAAACGCAGAAGAGGAGAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7342725 88 - 7796314 ACCAAATAAAATCTAGAGATCACTGTGCCTTCAGAGCCGAGGCCAGAGTGGGTAGAACCGCAGATTTTATAAACGCAGACAAGGAGGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814063 88 + 74750902 CCCAAATAAAATCTAGAGATCACTGTGTCTTCAGAGCCAAGGCCAGAGTGGGTGGAACTGCAGCTTCTATAAAGGCAGAAAAGGAGAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265073 88 - 17725628 CCCACATAAAATCTAGAGATCACTGTGTCTTCAGATCCAAGGCCAGAGTGGGTGGGGCTGCAGCTTTGATAAAGGCAGAAAAGGAGAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353129 88 + 6778120 CCCAAATACAATCTAGAGATCACTGTGCCTTCAGAGCCAAGGCCAGAGTGGGTGGGAGTGCAGCTTTGATAAAGGCAGAAAAGGAGAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 481 88 + 69927 CCCAAATAAAGTCTAGAGATCACTGTGTCTTCAGAGCCAAGGCCAGAGGGGGTGGAACTGCAGCTTTTATTAAGGCAGAAAAGGAGAT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88372331 86 + 114275543 CCCAAATAACATCTAGAGATTACTGTGTCTTCAGAGCAGAAGCCAGAGTGGATAGAACCACAGCAT-TCTAAAGGCAG-AAAGGAGAT i micMur3.chr1 I 54 C 0 s proCoq1.NW_012133858v1 14782557 87 - 22200726 CCCAAATAACATCTAGAGATTACTGAGTCTTCAGAGAAGAAGCCACAGTGGGTAGAACCACAGCCT-TCTAAAGGCGGAAAAGGAGAT i proCoq1.NW_012133858v1 I 66 C 0 s otoGar3.GL873829 193243 82 + 608964 ---AAATAACATCTAGAAATCACT--GTCTTTAGAAGAGAGGCCAGAGTGGGTAGAACCACAGCCT-GATGAAGGCAGCAGAGGAAAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32776386 48 + 98207768 GCCAAACACAACCAGGAGACTG--GCGCCTTC----------------TGGGTGGGACC----------------------AGGAGAC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2686504 87 - 6579706 CCCAAATAAAACCCAGAGACTACTTGGTCTTCTGAGCAGAGGCCAGAGTGGGCAAAATCACAGTCT-TATggaggcagaaaaggagat i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 2308249 151 - 31377067 I a score=127562.000000 s hg38.chr3_KI270934v1_alt 41188 8 + 163458 GGACGTGA s panTro5.chr3 2507864 8 - 202621043 GGACGTGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102305 8 - 190779 GGATGTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53656 8 - 106623 GGACGTGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819457 8 - 123690457 GGACGTGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325916 8 - 204787373 GGAAGTGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391677 8 - 192460366 GGAAGTGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130788 8 - 19675229 GGAAGTGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16364326 8 - 16847902 GGAAGTGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336651 8 + 91754291 GGAAGTGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401685 8 + 1977891 GGAAGTGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7342813 8 - 7796314 GGAAGTGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814151 8 + 74750902 GGAAGTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265161 8 - 17725628 AGAAGTGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353217 8 + 6778120 GGAAGTGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 569 7 + 69927 GGAAGT-A i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88372417 8 + 114275543 GGAAGTGA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14782644 8 - 22200726 GGAAGTGA i proCoq1.NW_012133858v1 C 0 I 118 s otoGar3.GL873829 193325 8 + 608964 GGAAGTGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32776434 8 + 98207768 AGATGTGA i mm10.chr16 C 0 C 0 s canFam3.chr33 2308400 8 - 31377067 GGGCGGGA i canFam3.chr33 I 151 I 1 s dasNov3.JH569502 2686591 8 - 6579706 ggaaatga i dasNov3.JH569502 C 0 C 0 a score=35707.000000 s hg38.chr3_KI270934v1_alt 41196 3 + 163458 GAG s panTro5.chr3 2507872 3 - 202621043 GAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102313 3 - 190779 GAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53664 3 - 106623 GAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819465 3 - 123690457 GAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325924 3 - 204787373 GAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391685 3 - 192460366 GAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130796 3 - 19675229 GAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16364334 3 - 16847902 GAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336659 3 + 91754291 GAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401693 3 + 1977891 GAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7342821 3 - 7796314 GAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814159 3 + 74750902 GAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265169 2 - 17725628 G-G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353225 3 + 6778120 GAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 576 3 + 69927 GAG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88372425 3 + 114275543 GAG i micMur3.chr1 C 0 I 121 s otoGar3.GL873829 193333 3 + 608964 GAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32776442 3 + 98207768 GGG i mm10.chr16 C 0 C 0 s canFam3.chr33 2308409 2 - 31377067 GA- i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2686599 3 - 6579706 ggg i dasNov3.JH569502 C 0 I 9 e proCoq1.NW_012133858v1 14782652 118 - 22200726 I a score=1447194.000000 s hg38.chr3_KI270934v1_alt 41199 128 + 163458 GGGAGGGCGTGAGGAAAGCCAGCTG-GGGGCCCCTCCTCT---GCCAGCCTTCGGGGTCCTTTC-TGAAGCAGAGGGTCTGAGAAACACTCCAGTCCCTCCACAAAAGTGGAAGAATACCTGTCTGGCCGGGG s panTro5.chr3 2507875 128 - 202621043 AGGAGGGCATGAGGAAAGCCAGCTG-GGGGCCCCTCCTCT---GCCAGCCTTCGGGGTCCTTTC-TGAAGCAGAGGGTCTGAGAAACACTCCAGTCCCTCCACAGAAGTGGAAGAATACCTGTCTGGCCGGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102316 128 - 190779 AGGAGGGCGTGAGGAAAGCCAGCTG-GGGGCCCCTCCTCT---GCCAGCCTTCGGGGTCCTTTC-TGAAGCAGAGGGTCTGAGAAACACTCCAGTCCCTCCACAGAAGTGGAAGAATACCTGTCTGGCCGGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53667 128 - 106623 GGGAGGGCGTGAGGAAAGCCAGCTG-GGGGCCCCTCCTCT---GCCAGCCTTCAGGGTCCTTTC-TGAAGCAGAGGGTCTGAGAAACACTCCAGTCCTTCCACAGAAGTGGAAGAATACCTGTCTGGCCGGGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819468 128 - 123690457 GGGAGGGCGTGAGGAAAGCCAGCTG-GGGGCCCCTCCTCT---GCCAGCCTTCGGGGTCCTTTC-TGAAGCAGAGGGTCTGAGACACACTCCAGTCCCTCCACAGAAGTGGAAGAATACCTGCCTGGCCAGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2325927 128 - 204787373 GCGAGGGCGTGAGGAAAGCCGGCTG-GGGGCCCCTCCTCT---GCCAGCCTTCAGGGTCCTTTC-TGAAGCAGAAGGCCTGAGAAACACTCCAGTCCCTCTCTAGAAGTGGAAGAATACCTGCCTGGTCGAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391688 128 - 192460366 GCGAGGGCGTGAGGAAAGCCGGCTG-GGGGCCCCTCCTCT---GCCAGCCTTCAGGGTCCTTTC-TGAAGCAGAAGGCCTGAGAAACACTCCAGTCCCTCTCTAGAAGTGGAAGAATACCTGCCTGGTCGAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130799 128 - 19675229 GCGAGGGCGTGAGGAAAGCCGGCTG-GGGGCCCCTCCTCT---GCCAGCCTTCAGGGTCCTTTT-TGAAGCAGAAGGCCTGAGAAACACTCCAGTCCCTCTCTAGAAGTGGAAGAATACCTGCCTGGTCGAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16364337 128 - 16847902 GCAAGGGCGTGAGGAAAGCCGGCTG-GGGGCCCCTCCTCT---GCCAGCCTTCAGGGTCCTTTC-TGAAGCAGAAGGCCTGAGAAACACTCCAGTCCCTCTCTAAAAGTGGAAGAATACCTGCCTGGTCGAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336662 128 + 91754291 GCGAGGGCGTGAGGAAAGCCGGCTG-GGGGCCCCTCCTCT---GCCAGCATTCAGGGTCCTTTC-TGAAGCAGAAGGTGTGAGAAGCACTCCAGTCCCTCTCTAGAAGTGGAAGAATACCTGCCTGGCCGAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401696 128 + 1977891 GCAAGGGCGTGAGGAAAGCCGGCTG-GGGGCCCCTCCTCT---GCCAGCCTTCAGGGTCCTTTC-TGAAGCAGAAGGCCTGAGAAACACTCCAGTCCCTCTCTAGAAGTGGAAGAATACCTGCCTGGTCGAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7342824 124 - 7796314 GGGAGGGCGTGAGGAAAGCCGGCTG-GGGGCCCCTCCTCT---GCC----TTCAGGGTCCTTTC-TGAAGCAGAAGGTCTGAAAAACACTCCAGTCCCTCTCTAGAAGTCGAAGAATACCTGCCTGGCCGAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814162 127 + 74750902 GGGAGAGTATGAGGAAAGCTGGCT--GGGGACCCTCATCT---GCCAGCCTTCCGGGTCCTTTC-TGAAGCAGAGGGTCTGAGAAACACTCCACTCCTGCTGCAGAAGTGGACGAATGCCTGCCTGGCTGAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265171 126 - 17725628 GGGAGAGTGTGAGGACAGCCGACT---GGGCCCCTCCTCT---GCCAGCCTTTGGGGTCCTTTC-TGAAGCAGAGGGTCTGAGAAACACTCCACTCCCGCTGCAGAAGTGGAAGAACACCTGCCTGGCCGAGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353228 126 + 6778120 GGGAGAATGTGGGGAGAGCCGGCC---CGGGCCCTCCTCT---GCCGGCCTTCGGGGTCCTTTC-TGAAGCAGAGGGTCTGAGAAACACTCCACTCCCACTGCATAAGTGGAAGAATACCTGCCTGGCGGAGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 579 130 + 69927 GGGAGAGTGTGAGGAAAGCCGGCT--GGGGTCCGTCTTCTGCCGCCAGCCTTTGGGGTCCTTTC-TGAAGCAGAGGGTCTGAGAAGCACTCCACTCCTGCTGCAGAAGTGGAAGAATACCTGCCTGGCCGAGG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 193336 121 + 608964 ---------AGAGGAAAGCAAGCTGCCGGGCCCTTCTCCT---GCAGGCCTTCAGGGTCCTTTCTTGATGCAGAGGGTCTGATAAATTCTCCGTTCCCTCTGTGGAAGTGGAAGAATACTTACCTGGCAGAGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32776445 123 + 98207768 --GAGAAGGGGAGGA-AGCAGACT--GACATCTTTCTCCC---ACCAGCTTCTGGGTCCCTCTC-TGGCGAGGATGCTCTGGTCAGCAAGCCATGCCCTGTGCAGAGGGGAAAAACCACTCACCTGGCAGAC- i mm10.chr16 C 0 C 0 s canFam3.chr33 2308411 88 - 31377067 AGGAGGGGGCGAGACAAGCAGGCTG-GGGCTCCCCACTCC---GC-GGCCTTGGGGTCCCTTCC-CGCTGCAGCAGGTCTGCTAAA--------------TGCAGAGG------------------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2686611 129 - 6579706 gggagggagcaaggaaaggaggCTA-GGGGGCCTTTCTCC---TACAGTCTCATGGGTCCTTCCCTGATGCCCAGGGTCTGATTAACACTCTACTCCCTCTGCAGAAGTGGGAGAATACCTAACTGGCTGAGG i dasNov3.JH569502 I 9 C 0 e proCoq1.NW_012133858v1 14782652 118 - 22200726 I e micMur3.chr1 88372428 121 + 114275543 I a score=940099.000000 s hg38.chr3_KI270934v1_alt 41327 68 + 163458 -AAAGGGGTTGCCCTGCAGAGAAACGCCTGGAAAAG--GGGGGAAGG------ATGGTTTGG-GG--TTCCGAGTGGCCC s panTro5.chr3 2508003 68 - 202621043 -AAAGGGGTTGCCCTGCAGAGAAACTCCTGGAAAAG--GGGGGAAGG------ATGGTTTGG-GG--TTCCGAGTGGCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102444 68 - 190779 -AAAGGGGTTGCCCTGCAGAGAAACTCCTGGAAAAG--GGGGGAAGG------ATGGTTTGG-GG--TTCCGAGTGGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53795 68 - 106623 -AAAGGGGTTGCCCTGCAGAGAAATGCCTGGAAAAG--GGGGGAAGG------ATGGTTTGG-GG--TTCCGAGTGGCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819596 65 - 123690457 -AAAGGGGTTGCCCTGCAGAGAAACGCCTGGAAAAG--CAGGGAAGG------ATGGTTTGG-GG--TTCCGAGTGG--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326055 68 - 204787373 -AAAGGGGTTGCCTTGCAGAGAAACGCCTGGAAAAG--GGGGGAAGG------ATGGTTTGG-GG--TTCTGAGTGGCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391816 68 - 192460366 -AAAGGGGTTGCCTTGCAGAGAAACGCCTGGAAAAG--GGGGGAAGG------ATGGTTTGG-GG--TTCTGAGTGGCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130927 68 - 19675229 -AAAGGGGTTGCCTTGCAGAGAAACGCCTGGAAAAG--GGGGGAAGG------ATGGTTTGG-GG--TTCTGAGTGGCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16364465 68 - 16847902 -AAAGGGGTTGCCTTGCAGAGAAACGCCTGGAAAAG--GGGGGAAGG------ATGGTTTGG-GG--TTCTGAGTGGCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336790 68 + 91754291 -AAAGGGGTTGCCCTGCAGAGAAACACCTGGAAAAG--GGGGGAAGG------ATGGTTTGG-GG--TTCTGAGTGGCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401824 68 + 1977891 -AAAGGGGTTGCCTTGCAGAGAAACGCCTGGAAAAG--GGGGGAAGG------ATGGTTTGG-GG--TTCTGAGTGGCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7342948 69 - 7796314 -AAAGGGGTTGCCCTGCAGAGAAACGCCTGGAAAAG--TGGGGAAGG------ATGGTTTGG-GG-TTTCTGAGTGGCCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814289 50 + 74750902 -AAGGGGGTTTCCCTGC--AGAAATGCCTGGAAAAG--GGGAGAAG-------------------------GAGTGGCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265297 68 - 17725628 -AAGAGTGTTTCCCTGCAGAGAAATGCCTGGAAAAG--GGGAGGAGG------AGGGTTTGG-GG--TTCCGAGTGGCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353354 68 + 6778120 -AAGAGTGTTTCCCTGCAGAGAAATGCCTGGAAAAG--GGGAGAAGG------AGGGTCTGG-GG--TTCCGAGTGGCCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 709 68 + 69927 -AAGAGGGTTTCCCTGCAGAGAAATGCCTGGAAAAG--GGGAGAAGG------AGGGTCTGG-GG--TTCCAAGTGGCCC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88372549 69 + 114275543 -AAAAGGGTTGTCCTGCAGAGAAAAGCCTGGAAAGG--GGGAGAAGG------ATGGTTTGGAGG--TTCTGAGTGGCCC i micMur3.chr1 I 121 I 110 s proCoq1.NW_012133858v1 14782770 69 - 22200726 -AAAAGGGTTGCCCTGCAGAGAAAAGCCTGGAAAGG--GGGAGAAGG------ATGGTTTGGAGG--TTCTGAGTGGCCC i proCoq1.NW_012133858v1 I 118 I 107 s otoGar3.GL873829 193457 69 + 608964 -AAACGGGGTTGCCTGCATAGAAATGCCTGGAAGTG--GGGGAAAGG------ATGGTTTGGGGG--TTCTGAGTGGCCC i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32776568 70 + 98207768 -AGAACGGTTGCTTTACAGAGACATGCTTGGGGAAGATGTGGGGAAG------GCAGTGTGG-GG--TTCAGAGTAGTGA i mm10.chr16 C 0 I 12 s canFam3.chr33 2308499 70 - 31377067 --AAAGGCTT--CGGGCAGGGGA---CCAGGAGAAG--GGAGGGGGAGACTTCAGGGGTCGG-GGACTGCTAGGCAGGCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2686740 61 - 6579706 AAAAAAGGTTACCAGGCAGGGAAAGGCCTGGAGAAG--G--------------ATAGTTTGG-GG--TTCAGAGTAGCTC i dasNov3.JH569502 C 0 C 0 a score=580457.000000 s hg38.chr3_KI270934v1_alt 41395 86 + 163458 -GAAGTGGAA--------------CACT----------------G--GGG--------GAAAGCAAGCC----TGTCCC--GGAGCGGGTTTCCACGGGCT-GG---G--CCG-----------------TCCCTCTGCTG--------CCCTGCGCGCTGCTG s panTro5.chr3 2508071 86 - 202621043 -GAAGCGGAA--------------CACT----------------G--GGG--------GAAAGCAAGCC----TGTCCC--GGAGCGGGTTTCCACGGGCT-GG---G--CTG-----------------TCCCTCTGCTG--------CCCAGCGCGCTGCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102512 86 - 190779 -GAAGCGGAA--------------CACT----------------G--GGG--------GAAAGCAAGCC----TGTCCC--GGAGCGGGTTTCCACGGGCT-GG---G--CTG-----------------TCCCTCTGCTG--------CCCAGCGCGCTGCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53863 86 - 106623 -GAAGCGGAA--------------CACT----------------G--GGG--------GAAAGCAAGCC----TGTCCC--GGAGCGGGTTTCCACGGGCT-GG---G--CTG-----------------TCCCTCTGCTG--------TCCAGCGCGCTGCTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819661 72 - 123690457 ------GGGA--------------AA--------------------------------GAAAGCAGGCC----TGTCCC--GGAGCGGGTTTCCACGGGCT-GG---G--CTG-----------------TCCCTCTGCTC--------CCCAGCGC---GCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326123 91 - 204787373 -ACAGCAGAA--------------CACT----------------G--GGGGA----AAGAAAGCAGGCC----TGTCCC--AGAGCGGGTTTCCACGGGCT-GG---G--CTC-----------------TCCCTCCGCTG----C---CCCAGTGCGCTGCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391884 91 - 192460366 -ACAGCAGAA--------------CACT----------------G--GGGGA----AAGAAAGCAGGCC----TGTCCC--AGAGCGGGTTTCCACGGGCT-GG---G--CTC-----------------TCCCTCCGCTG----C---CCCAGTGCGCTGCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19130995 91 - 19675229 -ACAGCAGAA--------------CACT----------------G--GGGGA----AAGAAAGCAGGCC----TGTCCC--AGAGCGGGTTTCCACGGGCT-GG---G--CTC-----------------TCCCTCCGCTG----C---CCCAGTGCGCTGCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16364533 91 - 16847902 -ACAGCAGAA--------------CGCT----------------G--GGGGA----AAGAAAGCAGGCC----TGTCCC--AGAGCGGGTTTCCACGGGCT-GG---G--CTC-----------------TCCCTCCGCTG----C---CCCAGTGCGCTGCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336858 91 + 91754291 -ACAGCAGAA--------------CACT----------------G--GGGGA----AAGAAAGCAGGCC----TGTCCC--GGAGCAGGTTTCCACGGGCT-GG---G--CTC-----------------TCCCTCCGCTG----C---CCCGGTGCGCTGCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401892 91 + 1977891 -ACAGCAGAA--------------CGCT----------------G--GGGGA----AAGAAAGCAGGCC----TGTCCC--AGAGCGGGTTTCCACGGGCT-GG---G--CTC-----------------TCCCTCCGCTG----C---CCCAGTGCGCTGCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7343017 91 - 7796314 -ACCGCAGAA--------------CACT----------------G--GGGGA----AAGAAAGCAGGCC----TGTCCC--GGAGCGGGTTTCCACGGGCT-GG---A--CTC-----------------TCCCTCTGCTG----C---CCCAGTGCGCTGCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814339 91 + 74750902 -ACAGCAGAA--------------CACT----------------G--CGGGA----AAGAAACCAGGCC----TGTCCC--AGAGCAGGTTTCCACCGGCT-GCTGGG--CTC-----------------TCCCTCTGCTG----CCTGC------TGCTGCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265365 68 - 17725628 -ACGGCAGAA--------------CATG----------------G--CAGGA----AAGAAGCCAGGCC----TGTCCC--AGAGC---------------------G--CGT-----------------TCCCTCTGCCG----C---C------CGCTGCTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353422 84 + 6778120 -ACAGCAGGA--------------CACC----------------G--CAGGA----AAGAAACCAGGCC----TGTCCC--AGAGCGGTTTTCCACGGGCT-G----G--CTC-----------------TCCCTCTGCTG----C---C------CACTGCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 777 85 + 69927 -ACAGCAGAA--------------CACT----------------G--TGGGA----AAGAAACAAGGCC----TGTCCC--AGAGCAGGTTTCCAAGGGCT-GG---G--CTC-----------------TCCCTCTGCTG----C---C------CACTGCTG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 193527 104 + 608964 -CAGGCAGAA--------------TACCAATTGAGCAGGCTTTAG--GGGAA----AAGAAACCAAGCC----T----------GCAGGCTTCCATGGGCTAGG---G--GTC-----------------TCCTTCCACCTGTGAC---CCCAGAATGGTGTTA i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32776650 112 + 98207768 -TTGGGCAAG--------------CATT----------------GTCGGGGA----GGGAGAACCAAACAAGATATCCT--AGA--AGATATCCTAGGGTT-AG---G--CTCCAACAGGCGGCTCATTGCCCATCAGCTG----C---CTCGTCGCGGCGTGG i mm10.chr16 I 12 C 0 s canFam3.chr33 2308569 73 - 31377067 -----GAGAG--------------GGCT----------------T--GGG--------GGGCCCGAG------CGTCCT--GGGGGGG---CCCCTGGGCT-GG---G----G-----------------ATCCTGGGCCT--------CCCTGCCTCCTGC-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2686801 117 - 6579706 ACAGGCAGAATGCAGATTGGAAGGCATT----------------G--GGGGAAGGTAAGAAGCCAAGGC----TTTTCCTGGAAGCAGGTTTCTAGGGGCT-GG---GGACTC-----------------TGTCTCCCCTA-TGAT---CCAAACATGTCATTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14782839 107 - 22200726 I e micMur3.chr1 88372618 110 + 114275543 I a score=3411908.000000 s hg38.chr3_KI270934v1_alt 41481 193 + 163458 CTGACCTCCCTACTCACTCTGCAGCTCTGGGGAGCTCTTTCCTGTGTCAGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCACTGCTACATCTCCCAGACTCTGGGCTGTCAGCCCATGTGCACCTGCCCCCCAGCCTTCACTGACAGCCGCTGCTTCCTGGCTGGGAACAACTTCAGTCCAAC s panTro5.chr3 2508157 193 - 202621043 CTGACCTCCCTACTCACTCTGCAGCTCTGGGGAGCTCTTTCCTGTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCACTGCTACATCTCCCAGACTCTGGGCTGTCAGCCCACGTGCACCTGCCCCCCGGCCTTCACTGACAGCCGCTGCTTCCTGGCTGGGAACAACTTCAGTCCAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102598 193 - 190779 CTGACCTCCCTACTCACTCTGCAGCTCTGGGGAGCTCTTTCCTGTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCACTGCTACATCTCCCAGACTCTGGGCTGTCAGCCCACGTGCACCTGCCCCCCGGCCTTCACTGACAGCCGCTGCTTCCTGGCTGGGAACAACTTCAGTCCAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53949 193 - 106623 CTGACCTCCCTACTCACTCTGCAGCTCTGGGGAGCTCTTTCCTGTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCACTGCTACATCTCCCAGACTCTGGGCTGTCAGCCCACGTGCACCTGCCCCCCGGCCTTCACTGACAGCCGCTGCTTCCTGGCTGGGAACAACTTCAGTCCAAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819733 193 - 123690457 CTGACCTCCCTACTCACTCTGCAGCTCTGGGGAGCTCTTTCCTGTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCACTGCTACATCTCCCAGACTCTGGGCTGCCAGCCCACGTGCATCTGTCCCCCGGCCTTCACCGACAGCCTCTGCTTCCTGGCTGGGAACAACTTCAGTCCAAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326214 193 - 204787373 CTGACCTCCCTGCTCACTCTGCAGCTCTGGGGAGCTCTCTCCTGTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCGCTGCTACATCTCCCAGACTCTGGGCTGCCAGCCCACATGCACCTGCCCCCCGGCCTTCACCGATAGCCTCTGCTTCCTGGCTGGGAACAACTTCAGTCCAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192391975 193 - 192460366 CTGACCTCCCTGCTCACTCTGCAGCTCTGGGGAGCTCTCTCCTGTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCGCTGCTACATCTCCCAGACTCTGGGCTGCCAGCCCACGTGCACCTGCCCCCCGGCCTTCACCGATAGCCTCTGCTTCCTGGCTGGGAACAACTTCAGTCCAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19131086 193 - 19675229 CTGACCTCCCTGCTCACTCTGCAGCTCTGGGGAGCTCTCTCCTGTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCGCTGCTACATCTCCCAGACTCTGGGCTGCCAGCCCACGTGCACCTGCCCCCCGGCCTTCACCGATAGCCTCTGCTTCCTGGCTGGGAACAACTTCAGTCCAAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16364624 193 - 16847902 CTGACCTCCCTGCTCACTCTGCAGCTCTGGGGAGCTCTCTCCTGTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCGCTGCTACATCTCCCAGACTCTGGGCTGCCAGCCCACGTGCACCTGCCCCCCGGCCTTCACCGATAGCCTCTGCTTCCTGGCTGGGAACAACTTCAGTCCAAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91336949 193 + 91754291 CTGACCTCCCTGCTCACTCTGCAGCTCTGGGGAGCTCTCTCCTGTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCGCTGCTACATCTCCCAGACTCTGGGCTGCCAGCCCACGTGCACCTGCCCCCCGGCCTTCACCGATAGCCTCTGCTTCCTGGCTGGGAACAACTTCAGTCCAAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1401983 193 + 1977891 CTGACCTCCCTGCTCACTCTGCAGCTCTGGGGAGCTCTCTCCTGTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCGCTGCTACATCTCCCAGACTCTGGGCTGCCAGCCGACGTGCACCTGCCCCCCGGCCTTCACCGATAGCCTCTGCTTCCTGGCTGGGAACAACTTCAGTCCAAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7343108 193 - 7796314 CTGACCTCCCTGCTCACTCTGCAGCTCCGGGGAGCTCTTTCCTGTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCACTGCTACATCTCCCAGACTCTGGGCTGCCAGCCCACGTGCACCTGCCCCCCGGCCTTCACCGATAGCCTCTGCTTCCTGGCTGGGAACAACTTCAGTCCAAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814430 193 + 74750902 CTGACCTCCCTGCTCCCTCTGCAGCTCTGGGCAGCTCTTCCCTCTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCACTGCTATATCTCTGAGGCTCTGGGCTGCCGGCCCTCGTGCACCTGCCCCCCAGCCTTCACCGATAGCCGCTGCCTCCTGGCTGGAAACAACTTCACTCCGAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265433 193 - 17725628 CTGACCTCCCTGCTCCTTCTGCAGCTCTGGGCAGCTCTTCCCTCTGTCGGAACCAGTCCTGCCCCATGAATTATTGCCACAATCAAGGCCACTGCTACATCTCCGAGGCTCTGGGCTGCCGGCCCTCCTGCACCTGCCCCCCAGCCTTCACCGATGGCCACTGCCTCCTGGCTGGAAACAACTTCACTCCGAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353506 193 + 6778120 CTGACCTCCCTGCTCCCTCTGCAGCTCTGGGCAGCTCTCCCCTCTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCACTGCTACATCTCCGAGGCTCTGGGCTGCCAGCCCTCGTGCACCTGCCCCCCAGCCTTCACCGACAGCCACTGCCTCCTGGCTGGAAACAACTTCACTCCGAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 862 191 + 69927 CTGACCTCC--GCTCCCTCCGCAGCTCTGGGCAGCTCTTCCCTCTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTATAATCAAGGCCACTGCTACATCTCCGAGGCTCTGGGCTGCCAGCCCTCATGCACCTGCCCCCCAGCCTTCACCGACAGCCGCTGCCTCCTGGCTGGAAACAACTTTACTCCGAC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88372728 193 + 114275543 CTGACCTCCCTGTTCCCTCTGCAGCTCTGGAGAACTCTTTCCTCTGTCAGAACAAGTCTTGTCCTGTGAACTACTGCTACAACCACGGCCACTGCTACATCTCCCAGACTCTGGGCTGTGAACCCACATGTACCTGCCCCCCGGCCTTCACCGACACCCGCTGCTTCCTGGCTGGGAACAACTTCACTCCAAC i micMur3.chr1 I 110 I 52 s proCoq1.NW_012133858v1 14782946 193 - 22200726 CTGACCTCCTTCCTCCATCTGCAGCTCTGGAGAACTCTTTCCTCTGTCAGAACAAGTCCTGTCCTGTGAACTACTGCTACAACCACGGCCACTGCTACATCTCCCAGACTCTGGGCTGCGAACCCATGTGTACCTGCCCCCCGGCCTTCACCGACACCCGCTGCTTCCTGGCTGGGAACAACTTCACTCCAAC i proCoq1.NW_012133858v1 I 107 I 313 s otoGar3.GL873829 193631 193 + 608964 CTAATTTCCCTGTTCCCTCTGCAGCTCTGGAGAACTCTATCCTCTGTCAGAACCGGTCCTGTCCTGTGAATTACTGCTACAACCATGGCCACTGCTACATCTCCCAGACTCTAGGCTGCCAGCCTGCGTGCACCTGCCCCCCAGCCTTCACTGACAGTCGCTGCTTGCTGGCTGGGAACAACTTTGCTCCAAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32776762 187 + 98207768 CTGATTCCCCTTCTCCCTTTACAGCTCTGGAGGACTCC------TGCCCAAACCGTTCCTGTCCCATGAATTACTGCTATAACAATGGCCATTGCGACATCTCTGAGGCTCCAGGCTGCCAGCCCACTTGCACCTGTCCCCCTGCCTTCACTGATAACCGCTGCTTCCTGGCTGGGAACAGTTTCACTCCCAC i mm10.chr16 C 0 C 0 s canFam3.chr33 2308642 184 - 31377067 ---------CTCCTCCCTCCGCAGCTCTGGCCCCCGGGCTGCACTGTGGGAACCGGTCCTGCCCCGCCAGTTACTGCTACAACCGGGGCCACTGCCACGTGTCCCCCGAGAGGGACTGCCAGCCGGCCTGCACCTGCCACCCCGCCTTCTCGGACAGCCGCTGCCTGGTGGCGGGGAACCCCTTCACTCCGGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2686918 193 - 6579706 CTAACCTCCCTCCTCCCACAGTAGCTCTGGAGAACTTTGTCCTCTGTCAGAACAAGTCCTGTCCAGTGAATTACTGCTACAACCACGGCCACTGCTCCCTCTCCCAGACACAGGGCTGCGAGCCCACCTGTACCTGCCCCCCAGCCTTCACCGACACCCGCTGCTTCCTGGCTGGGAACAACTTCACTCCAAC i dasNov3.JH569502 C 0 C 0 a score=210909.000000 s hg38.chr3_KI270934v1_alt 41674 19 + 163458 TGTCAACCTAGGTACCGCC s panTro5.chr3 2508350 19 - 202621043 TGTCAACCTAGGTATGGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102791 19 - 190779 TGTCAACCTAGGTACGGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54142 19 - 106623 TGTCAACCTAGGTACCGCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819926 19 - 123690457 TGTCAACCTAGGTACTGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326407 19 - 204787373 TGTCCACCTAGGTACCGCC i rheMac8.chr2 C 0 I 25 s macFas5.chr2 192392168 19 - 192460366 TGTCCACCTAGGTACCGCC i macFas5.chr2 C 0 I 22 s macNem1.NW_012014355v1 19131279 19 - 19675229 TGTCCACCTAGGTACCGCC i macNem1.NW_012014355v1 C 0 I 345 s cerAty1.NW_012004056v1 16364817 19 - 16847902 TGTCCACCTAGGTACCGCC i cerAty1.NW_012004056v1 C 0 I 122 s chlSab2.chr15 91337142 19 + 91754291 TGTCCACCTAGGTACCGCC i chlSab2.chr15 C 0 I 186 s manLeu1.NW_012102020v1 1402176 19 + 1977891 TGTCCACCTAGGTACCGCC i manLeu1.NW_012102020v1 C 0 I 927 s colAng1.NW_012118932v1 7343301 19 - 7796314 TGTCCACCTAGGTACCGCC i colAng1.NW_012118932v1 C 0 I 103 s calJac3.chr17 73814623 19 + 74750902 TGTCCGCCTAGGTACCACC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265626 19 - 17725628 CGTCAGCCCAGGTACCACC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353699 19 + 6778120 TGTCAGCCTGGGTACCACC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 1053 19 + 69927 CATCAGCCTAGGTACCACC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 193824 19 + 608964 TGCGAGTCCAGGTAGCACC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32776949 19 + 98207768 CATCTCTATGGGTATGGCT i mm10.chr16 C 0 C 0 s canFam3.chr33 2308826 19 - 31377067 CGCCCCTGCAGGTACCACC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2687111 19 - 6579706 CATCAAGCTAGGTACGTCG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e micMur3.chr1 88372921 52 + 114275543 I a score=5863.000000 s hg38.chr3_KI270934v1_alt 41693 2 + 163458 AG s panTro5.chr3 2508369 2 - 202621043 AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102810 2 - 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54161 2 - 106623 AG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819945 2 - 123690457 AG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73814642 2 + 74750902 AG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265645 2 - 17725628 GG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353718 2 + 6778120 AG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 1072 2 + 69927 AG i aotNan1.NW_018503669v1 C 0 I 13 s otoGar3.GL873829 193843 2 + 608964 AG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32776968 1 + 98207768 A- i mm10.chr16 C 0 C 0 s canFam3.chr33 2308845 2 - 31377067 GG i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 2687130 2 - 6579706 AG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e micMur3.chr1 88372921 52 + 114275543 I e macNem1.NW_012014355v1 19131298 345 - 19675229 I e colAng1.NW_012118932v1 7343320 103 - 7796314 I e manLeu1.NW_012102020v1 1402195 927 + 1977891 I e chlSab2.chr15 91337161 186 + 91754291 I e cerAty1.NW_012004056v1 16364836 122 - 16847902 I e macFas5.chr2 192392187 22 - 192460366 I e rheMac8.chr2 2326426 25 - 204787373 I a score=29.000000 s hg38.chr3_KI270934v1_alt 41695 3 + 163458 AGA s panTro5.chr3 2508371 3 - 202621043 AGA i panTro5.chr3 C 0 I 31 s panPan2.chrUn_NW_014024201v1 102812 3 - 190779 AGA i panPan2.chrUn_NW_014024201v1 C 0 I 31 s gorGor5.CYUI01000576v1 54163 3 - 106623 AGA i gorGor5.CYUI01000576v1 C 0 I 32 s nomLeu3.chr11 2819947 3 - 123690457 AGA i nomLeu3.chr11 C 0 I 32 s macFas5.chr2 192392209 3 - 192460366 AGG i macFas5.chr2 I 22 C 0 s calJac3.chr17 73814644 3 + 74750902 ATG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265647 3 - 17725628 ATG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353720 3 + 6778120 ATA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 193845 3 + 608964 ATG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2308849 1 - 31377067 G-- i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 2687132 3 - 6579706 ATG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e mm10.chr16 32776969 0 + 98207768 C e aotNan1.NW_018503669v1 1074 13 + 69927 I e micMur3.chr1 88372921 52 + 114275543 I e macNem1.NW_012014355v1 19131298 345 - 19675229 I e colAng1.NW_012118932v1 7343320 103 - 7796314 I e manLeu1.NW_012102020v1 1402195 927 + 1977891 I e chlSab2.chr15 91337161 186 + 91754291 I e cerAty1.NW_012004056v1 16364836 122 - 16847902 I e rheMac8.chr2 2326426 25 - 204787373 I a score=9745.000000 s hg38.chr3_KI270934v1_alt 41698 2 + 163458 CC- s panTro5.chr3 2508405 2 - 202621043 CC- i panTro5.chr3 I 31 C 0 s panPan2.chrUn_NW_014024201v1 102846 2 - 190779 CC- i panPan2.chrUn_NW_014024201v1 I 31 C 0 s gorGor5.CYUI01000576v1 54198 2 - 106623 CC- i gorGor5.CYUI01000576v1 I 32 C 0 s nomLeu3.chr11 2819982 2 - 123690457 CC- i nomLeu3.chr11 I 32 C 0 s rheMac8.chr2 2326451 2 - 204787373 CC- i rheMac8.chr2 I 25 I 96 s macFas5.chr2 192392212 2 - 192460366 CC- i macFas5.chr2 C 0 I 96 s cerAty1.NW_012004056v1 16364958 2 - 16847902 CC- i cerAty1.NW_012004056v1 I 122 C 0 s chlSab2.chr15 91337347 2 + 91754291 CC- i chlSab2.chr15 I 186 C 0 s calJac3.chr17 73814647 2 + 74750902 CC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265650 2 - 17725628 CC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353723 2 + 6778120 CC- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 193848 2 + 608964 CT- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2308850 2 - 31377067 CC- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2687135 2 - 6579706 -TG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e mm10.chr16 32776969 0 + 98207768 C e aotNan1.NW_018503669v1 1074 13 + 69927 I e micMur3.chr1 88372921 52 + 114275543 I e macNem1.NW_012014355v1 19131298 345 - 19675229 I e colAng1.NW_012118932v1 7343320 103 - 7796314 I e manLeu1.NW_012102020v1 1402195 927 + 1977891 I a score=18254.000000 s hg38.chr3_KI270934v1_alt 41700 2 + 163458 CC s panTro5.chr3 2508407 2 - 202621043 CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102848 2 - 190779 CC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54200 2 - 106623 CC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819984 2 - 123690457 CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326549 2 - 204787373 CC i rheMac8.chr2 I 96 C 0 s macFas5.chr2 192392310 2 - 192460366 CC i macFas5.chr2 I 96 C 0 s macNem1.NW_012014355v1 19131643 2 - 19675229 CC i macNem1.NW_012014355v1 I 345 C 0 s cerAty1.NW_012004056v1 16364960 2 - 16847902 CC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91337349 2 + 91754291 CC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7343423 2 - 7796314 CC i colAng1.NW_012118932v1 I 103 C 0 s calJac3.chr17 73814649 2 + 74750902 CT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265652 2 - 17725628 CT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353725 2 + 6778120 CT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 193850 2 + 608964 CC i otoGar3.GL873829 C 0 I 3 s canFam3.chr33 2308852 1 - 31377067 -T i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2687137 2 - 6579706 CC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e mm10.chr16 32776969 0 + 98207768 C e aotNan1.NW_018503669v1 1074 13 + 69927 I e micMur3.chr1 88372921 52 + 114275543 I e manLeu1.NW_012102020v1 1402195 927 + 1977891 I a score=12000.000000 s hg38.chr3_KI270934v1_alt 41702 1 + 163458 G s panTro5.chr3 2508409 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102850 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54202 1 - 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819986 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326551 1 - 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192392312 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19131645 1 - 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16364962 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91337351 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1403122 1 + 1977891 G i manLeu1.NW_012102020v1 I 927 C 0 s colAng1.NW_012118932v1 7343425 1 - 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814651 1 + 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265654 1 - 17725628 G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353727 1 + 6778120 G i cebCap1.NW_016107444v1 C 0 I 14 s canFam3.chr33 2308854 1 - 31377067 G i canFam3.chr33 I 1 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e mm10.chr16 32776969 0 + 98207768 C e aotNan1.NW_018503669v1 1074 13 + 69927 I e micMur3.chr1 88372921 52 + 114275543 I e dasNov3.JH569502 2687139 0 - 6579706 C e otoGar3.GL873829 193852 3 + 608964 I a score=13715.000000 s hg38.chr3_KI270934v1_alt 41703 2 + 163458 CC s panTro5.chr3 2508410 2 - 202621043 CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102851 2 - 190779 CC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54203 2 - 106623 CC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819987 2 - 123690457 CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326552 2 - 204787373 CC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192392313 2 - 192460366 CC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19131646 2 - 19675229 CC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16364963 2 - 16847902 CC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91337352 2 + 91754291 CC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1403123 2 + 1977891 CC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7343426 2 - 7796314 CC i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 193855 2 + 608964 TA i otoGar3.GL873829 I 3 C 0 s canFam3.chr33 2308855 2 - 31377067 CC i canFam3.chr33 C 0 I 113 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e mm10.chr16 32776969 0 + 98207768 C e aotNan1.NW_018503669v1 1074 13 + 69927 I e micMur3.chr1 88372921 52 + 114275543 I e dasNov3.JH569502 2687139 0 - 6579706 C e saiBol1.JH378146 17265655 0 - 17725628 C e calJac3.chr17 73814652 0 + 74750902 C e cebCap1.NW_016107444v1 6353728 14 + 6778120 I a score=116845.000000 s hg38.chr3_KI270934v1_alt 41705 34 + 163458 CTCTCACCCCCGCACTCTTCCTGGGCCCCACCCT s panTro5.chr3 2508412 34 - 202621043 CTCTCACCCCCGCACTCTTCCCGGGCCCCACCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102853 34 - 190779 CTCTCACCCCCGCCCTCTTCCCGGGCCCCACCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54205 34 - 106623 CTCTCACCCCCGCACTCTTCCCGGGCCCCACCCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2819989 34 - 123690457 CTCTCACCCCGGCACTCCTCCCGGGCCCCACCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326554 34 - 204787373 CTCTTACCCCTGCGCCCCACCCGGGCCCCGCCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192392315 34 - 192460366 CTCTTACCCCTGCGCCCCACCCGGGCCCCGCCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19131648 34 - 19675229 CTCTTACCCCTGCGCCCCACCCGGGCCCCGCCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16364965 34 - 16847902 CTCTCACCCCCACACTCCACCCAGGCCCCGCCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91337354 34 + 91754291 CTCTCACCCCCACACTCCACCCAGGCCCCGCCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1403125 34 + 1977891 CTCTCACCCCTGCGCCCCACCGGGGCCACGCCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7343428 34 - 7796314 CTCTCACTCCCGCGCCCCGCCCGGGCCCCGCCCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814652 5 + 74750902 ---------------------------CCACC-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265655 5 - 17725628 ---------------------------CCATC-- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 193857 18 + 608964 TCCCCACCTCCACACTTT---------------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32776969 10 + 98207768 -------------ACTGCTCCTG----------- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2687139 14 - 6579706 -CACTGTCTCTACAC------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e aotNan1.NW_018503669v1 1074 13 + 69927 I e micMur3.chr1 88372921 52 + 114275543 I e cebCap1.NW_016107444v1 6353728 14 + 6778120 I e canFam3.chr33 2308857 113 - 31377067 I a score=48464.000000 s hg38.chr3_KI270934v1_alt 41739 7 + 163458 CTCACCC s panTro5.chr3 2508446 7 - 202621043 CTCACCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102887 7 - 190779 CTCACCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54239 7 - 106623 CTCACCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2820023 7 - 123690457 CTTGCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326588 7 - 204787373 CTCACCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192392349 7 - 192460366 CTCACCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19131682 7 - 19675229 CTCACCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16364999 7 - 16847902 CTCACCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91337388 7 + 91754291 CTCACCC i chlSab2.chr15 C 0 I 294 s manLeu1.NW_012102020v1 1403159 7 + 1977891 CTCACCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7343462 7 - 7796314 CTCATCC i colAng1.NW_012118932v1 C 0 I 21 s calJac3.chr17 73814657 7 + 74750902 CTCACCA i calJac3.chr17 C 0 C 0 s aotNan1.NW_018503669v1 1087 7 + 69927 CTCACCT i aotNan1.NW_018503669v1 I 13 C 0 s otoGar3.GL873829 193875 4 + 608964 CTCA--- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32776979 6 + 98207768 -CCAGCC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2687153 3 - 6579706 ----CCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e micMur3.chr1 88372921 52 + 114275543 I e saiBol1.JH378146 17265660 0 - 17725628 C e cebCap1.NW_016107444v1 6353728 14 + 6778120 I e canFam3.chr33 2308857 113 - 31377067 I a score=20010.000000 s hg38.chr3_KI270934v1_alt 41746 3 + 163458 CCG s panTro5.chr3 2508453 3 - 202621043 CCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102894 3 - 190779 CCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54246 3 - 106623 CCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2820030 3 - 123690457 CCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326595 3 - 204787373 CCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192392356 3 - 192460366 CCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19131689 3 - 19675229 CCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16365006 3 - 16847902 CCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91337689 3 + 91754291 CCA i chlSab2.chr15 I 294 C 0 s manLeu1.NW_012102020v1 1403166 3 + 1977891 CCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7343490 3 - 7796314 CCA i colAng1.NW_012118932v1 I 21 C 0 s calJac3.chr17 73814664 3 + 74750902 TTG i calJac3.chr17 C 0 C 0 s aotNan1.NW_018503669v1 1094 3 + 69927 CTG i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32776985 3 + 98207768 CCA i mm10.chr16 C 0 I 2 s dasNov3.JH569502 2687156 3 - 6579706 TCG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e micMur3.chr1 88372921 52 + 114275543 I e saiBol1.JH378146 17265660 0 - 17725628 C e cebCap1.NW_016107444v1 6353728 14 + 6778120 I e canFam3.chr33 2308857 113 - 31377067 I e otoGar3.GL873829 193879 0 + 608964 C a score=37168.000000 s hg38.chr3_KI270934v1_alt 41749 7 + 163458 CACTCCG s panTro5.chr3 2508456 7 - 202621043 CACTCCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102897 7 - 190779 CACTCCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54249 7 - 106623 CACTCCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2820033 7 - 123690457 CACTCCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326598 7 - 204787373 CACTCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192392359 7 - 192460366 CACTCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19131692 7 - 19675229 CACTCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16365009 7 - 16847902 CACTCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91337692 7 + 91754291 CGCTCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1403169 7 + 1977891 CACTCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7343493 7 - 7796314 CGCTCCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814667 7 + 74750902 CACTCTT i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 6353742 7 + 6778120 CACTTCT i cebCap1.NW_016107444v1 I 14 C 0 s aotNan1.NW_018503669v1 1097 7 + 69927 CATTCCT i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32776990 5 + 98207768 CGTCT-- i mm10.chr16 I 2 C 0 s dasNov3.JH569502 2687159 3 - 6579706 TAT---- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e micMur3.chr1 88372921 52 + 114275543 I e saiBol1.JH378146 17265660 0 - 17725628 C e canFam3.chr33 2308857 113 - 31377067 I e otoGar3.GL873829 193879 0 + 608964 C a score=214804.000000 s hg38.chr3_KI270934v1_alt 41756 15 + 163458 CCCACCTTTGGGGAA s panTro5.chr3 2508463 15 - 202621043 CCCACCTTTGGGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102904 15 - 190779 CCCACCTTTGGGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54256 15 - 106623 CCCACCTTTGGGGAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2820040 15 - 123690457 CCCACCTTTGGAGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326605 15 - 204787373 CCCACCTTTGGGGAA i rheMac8.chr2 C 0 I 21 s macFas5.chr2 192392366 15 - 192460366 CCCACCTTTGGGGAA i macFas5.chr2 C 0 I 16 s macNem1.NW_012014355v1 19131699 15 - 19675229 CCCACCTTTGGGGAA i macNem1.NW_012014355v1 C 0 I 16 s cerAty1.NW_012004056v1 16365016 15 - 16847902 CCCGCCTTTGGGGAA i cerAty1.NW_012004056v1 C 0 I 16 s chlSab2.chr15 91337699 15 + 91754291 CCCACCTTTGGGGAA i chlSab2.chr15 C 0 I 16 s manLeu1.NW_012102020v1 1403176 15 + 1977891 CCCACCTTTAGGGAA i manLeu1.NW_012102020v1 C 0 I 16 s colAng1.NW_012118932v1 7343500 15 - 7796314 CCCACCTTTGGGGAA i colAng1.NW_012118932v1 C 0 I 16 s calJac3.chr17 73814674 15 + 74750902 CCCACCTTTGGGGAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265660 15 - 17725628 CCCGCCTTTGGGGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353749 15 + 6778120 CCCACCTTTGGGGAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 1104 15 + 69927 CCCGCCTTTGGGGAA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88372973 15 + 114275543 CCCACCTTTGGGGGA i micMur3.chr1 I 52 C 0 s otoGar3.GL873829 193879 10 + 608964 -----CTTTGGGGCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32776995 15 + 98207768 CTCGTATATGGGGAT i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2687162 11 - 6579706 ----CCTTTGGGGAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e canFam3.chr33 2308857 113 - 31377067 I a score=65319.000000 s hg38.chr3_KI270934v1_alt 41771 5 + 163458 GATGA s panTro5.chr3 2508478 5 - 202621043 GATGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102919 5 - 190779 GATGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54271 5 - 106623 GATGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2820055 5 - 123690457 GATGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192392397 5 - 192460366 GATGG i macFas5.chr2 I 16 C 0 s macNem1.NW_012014355v1 19131730 5 - 19675229 GATGG i macNem1.NW_012014355v1 I 16 C 0 s cerAty1.NW_012004056v1 16365047 5 - 16847902 GATGG i cerAty1.NW_012004056v1 I 16 C 0 s chlSab2.chr15 91337730 5 + 91754291 GATGG i chlSab2.chr15 I 16 C 0 s manLeu1.NW_012102020v1 1403207 5 + 1977891 GATGG i manLeu1.NW_012102020v1 I 16 C 0 s colAng1.NW_012118932v1 7343531 5 - 7796314 GATGG i colAng1.NW_012118932v1 I 16 C 0 s calJac3.chr17 73814689 5 + 74750902 GATGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265675 5 - 17725628 GATGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353764 5 + 6778120 GATGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 1119 5 + 69927 GACAG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88372988 5 + 114275543 GATGA i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 193889 5 + 608964 GATGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32777010 5 + 98207768 GATGG i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2687173 5 - 6579706 GGTGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e canFam3.chr33 2308857 113 - 31377067 I e rheMac8.chr2 2326620 21 - 204787373 I a score=184193.000000 s hg38.chr3_KI270934v1_alt 41776 15 + 163458 GGAAGC-----TCTGGGGTC---------------------- s panTro5.chr3 2508483 15 - 202621043 GGAAGC-----TCTGGGGTC---------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102924 15 - 190779 GGAAGC-----TCTGGGGTC---------------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54276 15 - 106623 GGAAGC-----TCTGGGGTC---------------------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2820060 15 - 123690457 GGAAGC-----TCTGGGGTC---------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326641 15 - 204787373 GGAAGC-----TCTGGGGTC---------------------- i rheMac8.chr2 I 21 C 0 s macFas5.chr2 192392402 15 - 192460366 GGAAGC-----TCTGGGGTC---------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19131735 15 - 19675229 GGAAGC-----TCTGGGGTC---------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16365052 15 - 16847902 GGAAGC-----TCTGGGGTC---------------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91337735 15 + 91754291 GGAAAC-----TCTGGGGTC---------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1403212 15 + 1977891 GGAAGC-----TCTGGGGTC---------------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7343536 15 - 7796314 GGAAGC-----TCTGGGGTC---------------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814694 14 + 74750902 GGAAGC-----TCTGGGA-C---------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265680 15 - 17725628 GGAAGC-----TCTGGGGTC---------------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353769 15 + 6778120 GGACGC-----TCTGGGGTC---------------------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 1124 13 + 69927 GGAAGC-----TCTGGGG------------------------ i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88372993 15 + 114275543 GGGAAC-----TCTGGGGTC---------------------- i micMur3.chr1 C 0 I 226 s otoGar3.GL873829 193894 15 + 608964 GGAAAC-----TCTGGGGTC---------------------- i otoGar3.GL873829 C 0 I 21 s mm10.chr16 32777015 20 + 98207768 GAAAACCAGTGTCTGAGGTC---------------------- i mm10.chr16 C 0 I 9 s dasNov3.JH569502 2687178 37 - 6579706 TGAGAC-----TCTGGCCCCCAAGGCTAAGTTCCTCAAACTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e canFam3.chr33 2308857 113 - 31377067 I a score=1485668.000000 s hg38.chr3_KI270934v1_alt 41791 151 + 163458 ACAGGACAGAGCTCCAGATTTCTCTGGGATGGT-GTAAGGTGCGGGCTATGGGAGCTGGCGAGGCAAGCTGTCACGGCAAGGACCACGGGCCTGTGTGGCCTATGGAGGAAGGACGGAGGCAGA------------------------------------------------------------------------GACCTCACAGCTGGCTCAGTGAGATGAG s panTro5.chr3 2508498 138 - 202621043 ACAGGACAGAGCTCCAGATTTCTCTGGGATGGT-GTAAGGTGCGGGCTGTGGGAGCTGGCGA-------------GGCAAGGACCACGGGCCTGTGTGGCCTATGGAGGAAGGACGGAGGCAGA------------------------------------------------------------------------GACCTCACAGCTGGCTCAGTGAGATGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102939 138 - 190779 ACAGGACAGAGCTCCAGATTTCTCTGGGATGGT-GTAAGGTGCGGGCTGTGGGAGCTGGCGA-------------GGCAAGGACCACGGGCCTGTGTGGCCTATGGAGGAAGGACGGAGGCAGA------------------------------------------------------------------------GACCTCACAGCTGGCTCAGTGAGATGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54291 151 - 106623 ACAGGACAGAGCTCCAGATTTCTCTGGGATGGT-GTAAGATGCGGGCTGTGGGAGCTGGCGAGGCAAGCTGTCACGGCAAGGACCACGGGCCTGTGTGGCCTATGGAGGAAGGACGGAGGCAGA------------------------------------------------------------------------GACCTCACAGCTGGCTCAGTGAGATGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2820075 151 - 123690457 ACAGGACAGAGCTCCAGATTTCTCTGGGACGGT-GTAAGGTGCAGGCTATGGGAGCTGGCGAGGAAAGCTGTCATGGCAAGGACCATGGGCCTGTGTGGCCTATGGAGGAAGGACGGAGGCAGA------------------------------------------------------------------------GACCTCACAGCTGGCTCAGTGAGATGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326656 149 - 204787373 ACAGGAC--AGCTCCGGATTTCTCTGGGATGGT-GTAAGGTGCGGGCTGTAGGAGCTGGCGAGGGCAGCTGTCACAGCAAGGACCACGGGGCTGTGTGGCCTGTGGAGGAAGGACGGAGGCAGA------------------------------------------------------------------------GACTTCACAGCTGGCTCAGTGAGATGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192392417 149 - 192460366 ACAGGAC--AGCTCCGGATTTCTCTGGGATGGT-GTAAGGTGCGGGCTGTAGGAGCTGGCGAGGGCAGCTGTCACAGCAAGGACCACGGGGCTGTGTGGCCTGTGGAGGAAGGACGGAGGCAGA------------------------------------------------------------------------GACTTCACAGCTGGCTCAGTGAGATGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19131750 149 - 19675229 ACAGGAC--AGCTCCGGATTTCTCTGGGATGGT-GTAAGGTGCGGGCTGTAGGGGCTGGCGAGGGCAGCTGTCACAGCAAGGACCACGGGGCTGTGTGGCCTGTGGAGGAAGGACGGAGGCAGA------------------------------------------------------------------------GACTTCACAGCTGGCTCAGTGAGATGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16365067 151 - 16847902 ACAGGACAGAGCTCCGGATTTCTCTGGGATGGT-GTAAGGTGCGGGCTGTAGGAGCAGGGGAGGGCAGCTGTCACAGCAAGGACCACGGGGCTGTGTGGCCTGTGGAGGAAGGACGGAGGCAGA------------------------------------------------------------------------GACTTCACAGCTGGCTCAGTGAGATGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91337750 149 + 91754291 ACAGGAC--AGCTCCGGATTTCTCTGGGATGGT-GTAAGGTGCGGGCTGTAGGAGCTGGCCAGGGCAGCTGTCACAGCAAGGACCACGGGGCTGTGTGGCCTGTGGAGAAAGGACGGAGGCAGA------------------------------------------------------------------------GACCTCACAGCTGGCTCAGTGAGATGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1403227 151 + 1977891 ACAGGACAGAGCTCCGGATTTCTCTGGGATGGT-GTAAGGTGCGGGCTGTAGGAGCAGGGGAGGGCAGCTGTCACAGCAAGGACCACGGGGCTGTGTGGCCTGTGGAGGAAGGACGGAGGCAGA------------------------------------------------------------------------GACCTCACAGCTGGCTCAGTGAGATGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7343551 151 - 7796314 ACAGGACAGAGCTCCGGATTTCTCTGGGATGGT-GTAAGGTGCGGGCTGTAGGAGCTGGCGGGGGCAGCTGTCACAGCAAGGACCACGGGGCTGTCTGGCCTGTGGAGGAAGGACGGAGGCAGA------------------------------------------------------------------------GACCTCACAGCTGGCTCAGTGAGATGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814708 150 + 74750902 ACAGCACAGAGCTCCAGGTTTCTCTGGGATGGG-GTAAGGTGTGGGCTGCGGGAGCTGGCGAGGGCAGCTGTCACGGCAAGGACCGTGGGCCTGTG-GACCTTCTGAGGAAGGGTGGAGGCAGA------------------------------------------------------------------------GACCTCATGGCTGGCTCAGGGAGAAGAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265695 137 - 17725628 ACAGCACAGAGCTCCGGGTTTCTCTGGGATGCT-GTAAGGTGTGGGCTGCGGGAGCTGGTGAGGGCCGCTGTCACGGCGAGGACCATGGGCCTGTG-GACCTACTGAGGAAGGGTGGAGGCAGA------------------------------------------------------------------------GACCTCATAGCTGGC------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353784 150 + 6778120 ACGGCACAGAGCTCCAGGCTTCTCTGGGGTGCT-GTAAGGTGTGGGCTGCGGGAGCTGGTGAGGGCCGCTGTCACGGCGAGGACCATGGGCTTGTG-GACCTACTGAGGAAGGGTGGAGGCAGA------------------------------------------------------------------------GACCTCATAGCTGGCTCAGGTAGATGAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 1137 130 + 69927 --------------------TCTCTGGGACGGT-GTAAGGTGTGGGCTGCGGGGGCCGGCGACGACAGCTGTCACGGCGCGGACCATGAGCCTGTG-GACCTCCTGAGGAAGGGTGGAGGCAGA------------------------------------------------------------------------GACCTCACAGCTGGCTCAGGGAGATGAG i aotNan1.NW_018503669v1 C 0 I 35 s otoGar3.GL873829 193930 148 + 608964 GCCAGGCAGAATTCTGGATTTCTCTTGGGTGGTGGTAAGTCATAGGCTGTGGGAGCTGGTGAGGGCCACTGTCACAGCGTGGACCACGGGCTTATGCACTCTGCGGAGAAAAGACTGCAGCAGG------------------------------------------------------------------------CATTTCGA----GGTTCAGCCAGATAAG i otoGar3.GL873829 I 21 C 0 s mm10.chr16 32777044 215 + 98207768 CAAAGGCACAGATCAGAA-----CTGAGGTGGT-G--AGTTTGGGGCTGGAGGACATGATGAGGAGAGCTCTCCCAGTGTGAACCACCGGCCTTGGTCATCTGCAGAGGACAGACGGAGGCAGAAGAAGCCTCGGCAGtgtagagagaatctcttgtgcatcgtgtggaagcatcaagtgtcaataagacgctgttggcctcctagcttaggcag-gaaatagg i mm10.chr16 I 9 I 1 s dasNov3.JH569502 2687215 145 - 6579706 ATAAGGCAGAATTCCAAATCTCTCTCAGGTGATAGTCAAATGTAGGCCATGGGAGCTGATGGTGACAGCTGTCTCCACATGAACCATGGG-CTGCCCAGTTTGCTGAGGAAAGACAGAAG--GA------------------------------------------------------------------------AATCTTGC----CCCTCAGCAAGATGAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e micMur3.chr1 88373008 226 + 114275543 I e canFam3.chr33 2308857 113 - 31377067 I a score=216273.000000 s hg38.chr3_KI270934v1_alt 41942 35 + 163458 CGCTGGGGAGGCCCGGAGCATAGTGGAGTGAGCCC s panTro5.chr3 2508636 35 - 202621043 CGCTGGGGAGGCCCGGAGCATAGTGGAGTGAGTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103077 35 - 190779 CGCTGGGGAGGTCCGGAGCATAGTGGAGTGAGTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54442 35 - 106623 CGCTGGGGAGGCCCGGAGCATAGTGGAGTGAGCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2820226 35 - 123690457 CGTCGGGGAGGTCCGGAGCATAGTGGAGTGAGCGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326805 34 - 204787373 CTGC-CGGAGGCCCGGGGCATAGTGGAGTGAGCGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192392566 34 - 192460366 CGGC-CGGAGGCCCGGGGCATAGTGGAGTGAGCGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19131899 34 - 19675229 CGGC-CGGAGGCCCGGGGCATAGTGGAGTGAGCGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16365218 34 - 16847902 TGGC-CGGAGGCCCGGGGCATAGTGGAGTGAGCGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91337899 34 + 91754291 CGGC-CGGAGGCCCGGGGCATAGTGGAGTGAGCGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1403378 34 + 1977891 CGGC-GGGAGGCCCGGGGCATAGTGGAGTGAGCGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7343702 34 - 7796314 CGGC-GGGAGGCCCGCGGCACAGTGGAGTGAGCGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814858 35 + 74750902 AGTCAGGGAGGCCCTAACCACAACTGAATGAGCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265832 33 - 17725628 --TCAGGGAGGCCCTGACCAGAATGGAATGAGCAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353934 35 + 6778120 AGTCAGGGAGACCCTGACCAGAAGGGAATGAGCAC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 194078 33 + 608964 AGTCAGGGAAGCTCTGGGCA-AGTAGAGCGAGCC- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32777260 31 + 98207768 aggt-agaagttcc--agcacagagaggggattt- i mm10.chr16 I 1 C 0 s dasNov3.JH569502 2687360 34 - 6579706 -GGCCAGGGACCCCTGCCCATAGTAGAATGAACAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e aotNan1.NW_018503669v1 1267 35 + 69927 I e micMur3.chr1 88373008 226 + 114275543 I e canFam3.chr33 2308857 113 - 31377067 I a score=10154.000000 s hg38.chr3_KI270934v1_alt 41977 4 + 163458 TAGC s panTro5.chr3 2508671 4 - 202621043 TAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103112 4 - 190779 TAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54477 4 - 106623 TAGC i gorGor5.CYUI01000576v1 C 0 I 336 s nomLeu3.chr11 2820261 4 - 123690457 TAGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192392600 4 - 192460366 TAGG i macFas5.chr2 C 0 C 0 s calJac3.chr17 73814893 4 + 74750902 TAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265865 4 - 17725628 TAGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353969 4 + 6778120 TAGG i cebCap1.NW_016107444v1 C 0 C 0 s mm10.chr16 32777291 4 + 98207768 cagt i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2687394 4 - 6579706 GAGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e aotNan1.NW_018503669v1 1267 35 + 69927 I e micMur3.chr1 88373008 226 + 114275543 I e macNem1.NW_012014355v1 19131933 0 - 19675229 C e canFam3.chr33 2308857 113 - 31377067 I e otoGar3.GL873829 194111 0 + 608964 C e colAng1.NW_012118932v1 7343736 0 - 7796314 C e manLeu1.NW_012102020v1 1403412 0 + 1977891 C e chlSab2.chr15 91337933 0 + 91754291 C e cerAty1.NW_012004056v1 16365252 0 - 16847902 C e rheMac8.chr2 2326839 0 - 204787373 C a score=35933.000000 s hg38.chr3_KI270934v1_alt 41981 10 + 163458 GTGAGGGCCA s panTro5.chr3 2508675 10 - 202621043 GTGAGGGCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103116 10 - 190779 GTGAGGGCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54817 10 - 106623 GTGAGGGCCA i gorGor5.CYUI01000576v1 I 336 C 0 s nomLeu3.chr11 2820265 10 - 123690457 GTGAGGGCCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192392604 10 - 192460366 GTGAGGGCCA i macFas5.chr2 C 0 C 0 s calJac3.chr17 73814897 10 + 74750902 GTGAGGGTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265869 10 - 17725628 GTGAGGATCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353973 10 + 6778120 GTGAGGGCCA i cebCap1.NW_016107444v1 C 0 C 0 s mm10.chr16 32777295 9 + 98207768 -ggagagaga i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2687398 10 - 6579706 GTGCAAGTCA i dasNov3.JH569502 C 0 I 8 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e aotNan1.NW_018503669v1 1267 35 + 69927 I e micMur3.chr1 88373008 226 + 114275543 I e macNem1.NW_012014355v1 19131933 0 - 19675229 C e canFam3.chr33 2308857 113 - 31377067 I e otoGar3.GL873829 194111 0 + 608964 C e colAng1.NW_012118932v1 7343736 0 - 7796314 C e manLeu1.NW_012102020v1 1403412 0 + 1977891 C e chlSab2.chr15 91337933 0 + 91754291 C e cerAty1.NW_012004056v1 16365252 0 - 16847902 C e rheMac8.chr2 2326839 0 - 204787373 C a score=38961.000000 s hg38.chr3_KI270934v1_alt 41991 15 + 163458 CTTCTCCCGGTTTCT s panTro5.chr3 2508685 15 - 202621043 CTTCTCCCGGTTTCT i panTro5.chr3 C 0 I 56 s panPan2.chrUn_NW_014024201v1 103126 15 - 190779 CTTCTCCCGGTTTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54827 15 - 106623 CTTCTCCCGGTTTCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2820275 15 - 123690457 CTTCTCCCGGTTTCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192392614 14 - 192460366 CTTCT-CCGGTGTCT i macFas5.chr2 C 0 C 0 s calJac3.chr17 73814907 15 + 74750902 CTTGTACTGATTTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265879 15 - 17725628 CTTCTCCCGATTTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353983 15 + 6778120 CTTCTCCTGATTTCT i cebCap1.NW_016107444v1 C 0 C 0 s mm10.chr16 32777304 15 + 98207768 tttgcttcaaactct i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e aotNan1.NW_018503669v1 1267 35 + 69927 I e micMur3.chr1 88373008 226 + 114275543 I e dasNov3.JH569502 2687408 8 - 6579706 I e macNem1.NW_012014355v1 19131933 0 - 19675229 C e canFam3.chr33 2308857 113 - 31377067 I e otoGar3.GL873829 194111 0 + 608964 C e colAng1.NW_012118932v1 7343736 0 - 7796314 C e manLeu1.NW_012102020v1 1403412 0 + 1977891 C e chlSab2.chr15 91337933 0 + 91754291 C e cerAty1.NW_012004056v1 16365252 0 - 16847902 C e rheMac8.chr2 2326839 0 - 204787373 C a score=15264.000000 s hg38.chr3_KI270934v1_alt 42006 4 + 163458 TCAG s panTro5.chr3 2508756 4 - 202621043 TCAG i panTro5.chr3 I 56 C 0 s panPan2.chrUn_NW_014024201v1 103141 4 - 190779 TCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54842 4 - 106623 TCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2820290 4 - 123690457 TCAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192392628 4 - 192460366 TCAG i macFas5.chr2 C 0 C 0 s calJac3.chr17 73814922 4 + 74750902 TCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265894 4 - 17725628 TCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6353998 4 + 6778120 TCAG i cebCap1.NW_016107444v1 C 0 C 0 s mm10.chr16 32777319 4 + 98207768 taag i mm10.chr16 C 0 I 221 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e aotNan1.NW_018503669v1 1267 35 + 69927 I e micMur3.chr1 88373008 226 + 114275543 I e dasNov3.JH569502 2687408 8 - 6579706 I e macNem1.NW_012014355v1 19131933 0 - 19675229 C e canFam3.chr33 2308857 113 - 31377067 I e otoGar3.GL873829 194111 0 + 608964 C e colAng1.NW_012118932v1 7343736 0 - 7796314 C e manLeu1.NW_012102020v1 1403412 0 + 1977891 C e chlSab2.chr15 91337933 0 + 91754291 C e cerAty1.NW_012004056v1 16365252 0 - 16847902 C e rheMac8.chr2 2326839 0 - 204787373 C a score=43115.000000 s hg38.chr3_KI270934v1_alt 42010 18 + 163458 CAACCTTCTGTCACTGTG s panTro5.chr3 2508760 18 - 202621043 CGACCTTCTGTCACTGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103145 18 - 190779 CAACCTTCTGTCACGGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54846 18 - 106623 CGACCTTCTGTCACGGTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2820294 18 - 123690457 CGACCTTCTGTCACTGTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192392632 15 - 192460366 TGAC---CTGTCACTGTG i macFas5.chr2 C 0 T 47 s calJac3.chr17 73814926 18 + 74750902 TGACCTTCTGTCACTGTG i calJac3.chr17 C 0 T 51 s saiBol1.JH378146 17265898 18 - 17725628 TGACCTTCTGTCACTGTG i saiBol1.JH378146 C 0 T 61 s cebCap1.NW_016107444v1 6354002 18 + 6778120 TGACCTTCTGTCACTGTG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 194111 4 + 608964 --ACCC------------ i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e mm10.chr16 32777323 221 + 98207768 I e aotNan1.NW_018503669v1 1267 35 + 69927 I e micMur3.chr1 88373008 226 + 114275543 I e dasNov3.JH569502 2687408 8 - 6579706 I e macNem1.NW_012014355v1 19131933 0 - 19675229 C e canFam3.chr33 2308857 113 - 31377067 I e colAng1.NW_012118932v1 7343736 0 - 7796314 C e manLeu1.NW_012102020v1 1403412 0 + 1977891 C e chlSab2.chr15 91337933 0 + 91754291 C e cerAty1.NW_012004056v1 16365252 0 - 16847902 C e rheMac8.chr2 2326839 0 - 204787373 C a score=7095.000000 s hg38.chr3_KI270934v1_alt 42028 5 + 163458 GAATG s panTro5.chr3 2508778 5 - 202621043 GAATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103163 5 - 190779 GAATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54864 5 - 106623 GAATG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2820312 5 - 123690457 GAATG i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378146 17265855 5 - 17725628 GAATG i saiBol1.JH378146 T 61 I 5 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e mm10.chr16 32777323 221 + 98207768 I e aotNan1.NW_018503669v1 1267 35 + 69927 I e micMur3.chr1 88373008 226 + 114275543 I e dasNov3.JH569502 2687408 8 - 6579706 I e macNem1.NW_012014355v1 19131933 0 - 19675229 C e calJac3.chr17 73814944 51 + 74750902 T e cebCap1.NW_016107444v1 6354020 0 + 6778120 C e canFam3.chr33 2308857 113 - 31377067 I e otoGar3.GL873829 194115 0 + 608964 C e colAng1.NW_012118932v1 7343736 0 - 7796314 C e manLeu1.NW_012102020v1 1403412 0 + 1977891 C e chlSab2.chr15 91337933 0 + 91754291 C e cerAty1.NW_012004056v1 16365252 0 - 16847902 C e macFas5.chr2 192392647 47 - 192460366 T e rheMac8.chr2 2326839 0 - 204787373 C a score=47244.000000 s hg38.chr3_KI270934v1_alt 42033 27 + 163458 TAGGGTGAGGGCCACTTCTCCCGGTTT s panTro5.chr3 2508783 27 - 202621043 TAGGGTGAGGGCCACTTCTCCCGGTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103168 27 - 190779 TAGGGTGAGGGCCACTTCTCCCGGTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54869 27 - 106623 TAGGGTGAGGGCCACTTCTCCCGGTTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2820317 27 - 123690457 TAGGGTGAGGGCCACTTCTCCTGGTTT i nomLeu3.chr11 C 0 I 9687 s calJac3.chr17 73814893 27 + 74750902 TAGGGTGAGGGTCACTTGTACTGATTT i calJac3.chr17 T 51 C 0 s saiBol1.JH378146 17265865 27 - 17725628 TAGGGTGAGGATCACTTCTCCCGATTT i saiBol1.JH378146 I 5 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e mm10.chr16 32777323 221 + 98207768 I e aotNan1.NW_018503669v1 1267 35 + 69927 I e micMur3.chr1 88373008 226 + 114275543 I e dasNov3.JH569502 2687408 8 - 6579706 I e macNem1.NW_012014355v1 19131933 0 - 19675229 C e cebCap1.NW_016107444v1 6354020 0 + 6778120 C e canFam3.chr33 2308857 113 - 31377067 I e otoGar3.GL873829 194115 0 + 608964 C e colAng1.NW_012118932v1 7343736 0 - 7796314 C e manLeu1.NW_012102020v1 1403412 0 + 1977891 C e chlSab2.chr15 91337933 0 + 91754291 C e cerAty1.NW_012004056v1 16365252 0 - 16847902 C e macFas5.chr2 192392647 47 - 192460366 T e rheMac8.chr2 2326839 0 - 204787373 C a score=1130.000000 s hg38.chr3_KI270934v1_alt 42060 2 + 163458 GC s panTro5.chr3 2508810 2 - 202621043 CT i panTro5.chr3 C 0 T 112 s panPan2.chrUn_NW_014024201v1 103195 2 - 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54896 2 - 106623 CT i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 73814920 2 + 74750902 CT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265892 2 - 17725628 CT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e mm10.chr16 32777323 221 + 98207768 I e aotNan1.NW_018503669v1 1267 35 + 69927 I e micMur3.chr1 88373008 226 + 114275543 I e dasNov3.JH569502 2687408 8 - 6579706 I e macNem1.NW_012014355v1 19131933 0 - 19675229 C e cebCap1.NW_016107444v1 6354020 0 + 6778120 C e canFam3.chr33 2308857 113 - 31377067 I e otoGar3.GL873829 194115 0 + 608964 C e colAng1.NW_012118932v1 7343736 0 - 7796314 C e manLeu1.NW_012102020v1 1403412 0 + 1977891 C e chlSab2.chr15 91337933 0 + 91754291 C e cerAty1.NW_012004056v1 16365252 0 - 16847902 C e macFas5.chr2 192392647 47 - 192460366 T e rheMac8.chr2 2326839 0 - 204787373 C e nomLeu3.chr11 2820344 9687 - 123690457 I a score=37750.000000 s hg38.chr3_KI270934v1_alt 42062 20 + 163458 TCAGCGACCTTCTGTCACTG s panTro5.chr3 2508700 20 - 202621043 TCAGCGACCTTCTGTCACTG i panTro5.chr3 T 112 C 0 s panPan2.chrUn_NW_014024201v1 103197 20 - 190779 TCAGCGACCTTCTGTCACTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54898 20 - 106623 TCAGCGACCTTCTGTCACGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830031 20 - 123690457 TCAGCGACCTTCTGTCACTG i nomLeu3.chr11 I 9687 C 0 s calJac3.chr17 73814922 20 + 74750902 TCAGTGACCTTCTGTCACTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265894 20 - 17725628 TCAGTGACCTTCTGTCACTG i saiBol1.JH378146 C 0 T 61 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e mm10.chr16 32777323 221 + 98207768 I e aotNan1.NW_018503669v1 1267 35 + 69927 I e micMur3.chr1 88373008 226 + 114275543 I e dasNov3.JH569502 2687408 8 - 6579706 I e macNem1.NW_012014355v1 19131933 0 - 19675229 C e cebCap1.NW_016107444v1 6354020 0 + 6778120 C e canFam3.chr33 2308857 113 - 31377067 I e otoGar3.GL873829 194115 0 + 608964 C e colAng1.NW_012118932v1 7343736 0 - 7796314 C e manLeu1.NW_012102020v1 1403412 0 + 1977891 C e chlSab2.chr15 91337933 0 + 91754291 C e cerAty1.NW_012004056v1 16365252 0 - 16847902 C e macFas5.chr2 192392647 47 - 192460366 T e rheMac8.chr2 2326839 0 - 204787373 C a score=13944.000000 s hg38.chr3_KI270934v1_alt 42082 7 + 163458 TGGAATG s panTro5.chr3 2508720 7 - 202621043 TGGAATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103217 7 - 190779 TGGAATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54918 7 - 106623 TGGAATG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830051 7 - 123690457 TGGAATG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73814942 7 + 74750902 TGGAATG i calJac3.chr17 C 0 T 56 s saiBol1.JH378146 17265853 7 - 17725628 TGGAATG i saiBol1.JH378146 T 61 I 5 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e mm10.chr16 32777323 221 + 98207768 I e aotNan1.NW_018503669v1 1267 35 + 69927 I e micMur3.chr1 88373008 226 + 114275543 I e dasNov3.JH569502 2687408 8 - 6579706 I e macNem1.NW_012014355v1 19131933 0 - 19675229 C e cebCap1.NW_016107444v1 6354020 0 + 6778120 C e canFam3.chr33 2308857 113 - 31377067 I e otoGar3.GL873829 194115 0 + 608964 C e colAng1.NW_012118932v1 7343736 0 - 7796314 C e manLeu1.NW_012102020v1 1403412 0 + 1977891 C e chlSab2.chr15 91337933 0 + 91754291 C e cerAty1.NW_012004056v1 16365252 0 - 16847902 C e macFas5.chr2 192392647 47 - 192460366 T e rheMac8.chr2 2326839 0 - 204787373 C a score=115717.000000 s hg38.chr3_KI270934v1_alt 42089 56 + 163458 TAGGGTGAGGGCCACTTCTCCCGGTTTCTTCAGCGACCTTCTGTCACTGTGGAATG s panTro5.chr3 2508727 56 - 202621043 TAGGGTGAGGGCCACTTCTCCCGGTTTCTTCAGCGACCTTCTGTCACTGTGGAATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103224 56 - 190779 TAGGGTGAGGGCCACTTCTCCCGGTTTCTTCAGCGACCTTCTGTCACTGTGGAATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54925 56 - 106623 TAGGGTGAGGGCCACTTCTCCCGGTTTCTTCAGCGACCTTCTGTCACGGTGGAATG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830058 56 - 123690457 TAGGGTGAGGGCCACTTCTCCCGGTTTCTTCAGTGACCTTCTGTCACTGTGGAATG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73814893 56 + 74750902 TAGGGTGAGGGTCACTTGTACTGATTTCTTCAGTGACCTTCTGTCACTGTGGAATG i calJac3.chr17 T 56 C 0 s saiBol1.JH378146 17265865 56 - 17725628 TAGGGTGAGGATCACTTCTCCCGATTTCTTCAGTGACCTTCTGTCACTGTGGAGTG i saiBol1.JH378146 I 5 C 0 s otoGar3.GL873829 194115 46 + 608964 ---GGTGAGGGTGACCAGTTCTGACTTCTCTAGTGACTTTCTGTCACTG------- i otoGar3.GL873829 C 0 I 2 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e mm10.chr16 32777323 221 + 98207768 I e aotNan1.NW_018503669v1 1267 35 + 69927 I e micMur3.chr1 88373008 226 + 114275543 I e dasNov3.JH569502 2687408 8 - 6579706 I e macNem1.NW_012014355v1 19131933 0 - 19675229 C e cebCap1.NW_016107444v1 6354020 0 + 6778120 C e canFam3.chr33 2308857 113 - 31377067 I e colAng1.NW_012118932v1 7343736 0 - 7796314 C e manLeu1.NW_012102020v1 1403412 0 + 1977891 C e chlSab2.chr15 91337933 0 + 91754291 C e cerAty1.NW_012004056v1 16365252 0 - 16847902 C e macFas5.chr2 192392647 47 - 192460366 T e rheMac8.chr2 2326839 0 - 204787373 C a score=24289.000000 s hg38.chr3_KI270934v1_alt 42145 3 + 163458 TAG s panTro5.chr3 2508783 3 - 202621043 TAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103280 3 - 190779 TAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54981 3 - 106623 TAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830114 3 - 123690457 TAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326839 3 - 204787373 TAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192392600 3 - 192460366 TAG i macFas5.chr2 T 47 C 0 s macNem1.NW_012014355v1 19131933 3 - 19675229 TAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16365252 3 - 16847902 TAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91337933 3 + 91754291 TAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1403412 3 + 1977891 TAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7343736 3 - 7796314 TAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814949 3 + 74750902 GAG i calJac3.chr17 C 0 T 56 s saiBol1.JH378146 17265921 3 - 17725628 GAG i saiBol1.JH378146 C 0 T 56 s aotNan1.NW_018503669v1 1302 3 + 69927 TAG i aotNan1.NW_018503669v1 I 35 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e mm10.chr16 32777323 221 + 98207768 I e micMur3.chr1 88373008 226 + 114275543 I e dasNov3.JH569502 2687408 8 - 6579706 I e cebCap1.NW_016107444v1 6354020 0 + 6778120 C e canFam3.chr33 2308857 113 - 31377067 I e otoGar3.GL873829 194161 2 + 608964 I a score=61110.000000 s hg38.chr3_KI270934v1_alt 42148 6 + 163458 GGTGAG s panTro5.chr3 2508786 6 - 202621043 GGTGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103283 6 - 190779 GGTGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54984 6 - 106623 GGTGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830117 6 - 123690457 GGTGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326842 6 - 204787373 GGTGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192392603 6 - 192460366 GGTGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19131936 6 - 19675229 GGTGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16365255 6 - 16847902 GGTGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91337936 6 + 91754291 GGTGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1403415 6 + 1977891 GGTGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7343739 6 - 7796314 GGTGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814896 6 + 74750902 GGTGAG i calJac3.chr17 T 56 C 0 s saiBol1.JH378146 17265868 6 - 17725628 GGTGAG i saiBol1.JH378146 T 56 C 0 s aotNan1.NW_018503669v1 1305 6 + 69927 GGTGAG i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e mm10.chr16 32777323 221 + 98207768 I e micMur3.chr1 88373008 226 + 114275543 I e dasNov3.JH569502 2687408 8 - 6579706 I e cebCap1.NW_016107444v1 6354020 0 + 6778120 C e canFam3.chr33 2308857 113 - 31377067 I e otoGar3.GL873829 194161 2 + 608964 I a score=112840.000000 s hg38.chr3_KI270934v1_alt 42154 15 + 163458 GGCCACTTCTCCCGG s panTro5.chr3 2508792 15 - 202621043 GGCCACTTCTCCCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103289 15 - 190779 GGCCACTTCTCCCGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54990 15 - 106623 GGCCACTTCTCCCGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830123 15 - 123690457 GGCCACTTCTCCCGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326848 14 - 204787373 GGCCACTTCT-CCGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192392609 14 - 192460366 GGCCACTTCT-CCGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19131942 14 - 19675229 GGCCACTTCT-CCGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16365261 14 - 16847902 GGCCACTTCT-CCGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91337942 14 + 91754291 GGCCACTTCT-CCGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1403421 14 + 1977891 GGCCACTTCT-CCGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7343745 14 - 7796314 GGCCACTTCT-CCGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814902 15 + 74750902 GGTCACTTGTACTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265874 15 - 17725628 GATCACTTCTCCCGA i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 1311 15 + 69927 GGTCATTTGTCCTGA i aotNan1.NW_018503669v1 C 0 C 0 s dasNov3.JH569502 2687416 15 - 6579706 GGCCACTTCTCCTGG i dasNov3.JH569502 I 8 C 0 e proCoq1.NW_012133858v1 14783139 313 - 22200726 I e mm10.chr16 32777323 221 + 98207768 I e micMur3.chr1 88373008 226 + 114275543 I e cebCap1.NW_016107444v1 6354020 0 + 6778120 C e canFam3.chr33 2308857 113 - 31377067 I e otoGar3.GL873829 194161 2 + 608964 I a score=13435.000000 s hg38.chr3_KI270934v1_alt 42169 3 + 163458 -TTT s panTro5.chr3 2508807 3 - 202621043 -TTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103304 3 - 190779 -TTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55005 3 - 106623 -TTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830138 3 - 123690457 -TTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326862 3 - 204787373 -TGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192392623 3 - 192460366 -TGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19131956 3 - 19675229 -TGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16365275 3 - 16847902 -TGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91337956 3 + 91754291 -TGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1403435 3 + 1977891 -TGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7343759 3 - 7796314 -TGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814917 3 + 74750902 -TTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17265889 3 - 17725628 -TTT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 1326 3 + 69927 -CTT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88373234 3 + 114275543 -TTT i micMur3.chr1 I 226 C 0 s proCoq1.NW_012133858v1 14783452 3 - 22200726 -TTT i proCoq1.NW_012133858v1 I 313 C 0 s dasNov3.JH569502 2687431 3 - 6579706 ATC- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32777323 221 + 98207768 I e cebCap1.NW_016107444v1 6354020 0 + 6778120 C e canFam3.chr33 2308857 113 - 31377067 I e otoGar3.GL873829 194161 2 + 608964 I a score=237270.000000 s hg38.chr3_KI270934v1_alt 42172 22 + 163458 CTTCAGTGACCTTCTGTCACTG s panTro5.chr3 2508810 22 - 202621043 CTTCAGTGACCTTCTGTCACTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103307 22 - 190779 CTTCAGTGACCTTCTGTCACTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55008 22 - 106623 CTTCAGTGACCTTCTGTCACTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830141 22 - 123690457 CTTCAGTGACCTTCTGTCACTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326865 19 - 204787373 CTTCAGTGAC---CTGTCACTG i rheMac8.chr2 C 0 I 2 s macFas5.chr2 192392626 19 - 192460366 CTTCAGTGAC---CTGTCACTG i macFas5.chr2 C 0 I 2 s macNem1.NW_012014355v1 19131959 19 - 19675229 CTTCAGTGAC---CTGTCACTG i macNem1.NW_012014355v1 C 0 I 2 s cerAty1.NW_012004056v1 16365278 19 - 16847902 CTTCAGTGAC---CTGTCACTG i cerAty1.NW_012004056v1 C 0 I 2 s chlSab2.chr15 91337959 19 + 91754291 CTTCAGTGAC---CTGTCACTG i chlSab2.chr15 C 0 I 2 s manLeu1.NW_012102020v1 1403438 19 + 1977891 CTTCAGTGAC---CTGTCACTG i manLeu1.NW_012102020v1 C 0 I 2 s colAng1.NW_012118932v1 7343762 19 - 7796314 CTTCAGTGAC---CTGTCACTG i colAng1.NW_012118932v1 C 0 I 2 s calJac3.chr17 73814920 22 + 74750902 CTTCAGTGACCTTCTGTCACTG i calJac3.chr17 C 0 I 2 s saiBol1.JH378146 17265892 22 - 17725628 CTTCAGTGACCTTCTGTCACTG i saiBol1.JH378146 C 0 I 2 s aotNan1.NW_018503669v1 1329 22 + 69927 CTTCAGTGACCTTCTGTCACTG i aotNan1.NW_018503669v1 C 0 I 2 s micMur3.chr1 88373237 22 + 114275543 CTCCAGTGACCTTCTGTCACTG i micMur3.chr1 C 0 I 2 s proCoq1.NW_012133858v1 14783455 22 - 22200726 CTCCAGTGACCTTCTGTCACTG i proCoq1.NW_012133858v1 C 0 I 2 s mm10.chr16 32777544 20 + 98207768 TTTCAGTGACC--TTGCCATGG i mm10.chr16 I 221 I 1 s dasNov3.JH569502 2687434 18 - 6579706 CCCCTGTGACCTTCTGTA---- i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 6354020 0 + 6778120 C e canFam3.chr33 2308857 113 - 31377067 I e otoGar3.GL873829 194161 2 + 608964 I a score=219130.000000 s hg38.chr3_KI270934v1_alt 42194 19 + 163458 GAATGGAGCAGTCAACTTG s panTro5.chr3 2508832 19 - 202621043 GAATGGAGCAGTCGACTTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103329 19 - 190779 GAATGGAGCAGTCGACTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55030 19 - 106623 GAATGGAGCAGTCGACTTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830163 19 - 123690457 GAATGGAGCAGTCGGCCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326886 19 - 204787373 GAATGGAGCCGTTGCCCTG i rheMac8.chr2 I 2 C 0 s macFas5.chr2 192392647 19 - 192460366 GAATGGAGCCGTTGCCCTG i macFas5.chr2 I 2 C 0 s macNem1.NW_012014355v1 19131980 19 - 19675229 GAATGGAGCCGTTGCCCTG i macNem1.NW_012014355v1 I 2 C 0 s cerAty1.NW_012004056v1 16365299 19 - 16847902 GAATGGAGCCGTCGCCCTG i cerAty1.NW_012004056v1 I 2 C 0 s chlSab2.chr15 91337980 19 + 91754291 GAATGGAGCCGTCGCCCTG i chlSab2.chr15 I 2 C 0 s manLeu1.NW_012102020v1 1403459 19 + 1977891 GAATGGAGCCGTCGCCCTG i manLeu1.NW_012102020v1 I 2 C 0 s colAng1.NW_012118932v1 7343783 19 - 7796314 GAATGGAGCAGTCGCCCTG i colAng1.NW_012118932v1 I 2 C 0 s calJac3.chr17 73814944 19 + 74750902 GAATGGAGTAGTCTCCCTG i calJac3.chr17 I 2 C 0 s saiBol1.JH378146 17265916 19 - 17725628 GAGTGGAGTAGTCTCCCTG i saiBol1.JH378146 I 2 C 0 s cebCap1.NW_016107444v1 6354020 19 + 6778120 GAATGGAGTAGTCTCCCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 1353 19 + 69927 GAATGGAGGAGTCTCCCTG i aotNan1.NW_018503669v1 I 2 C 0 s micMur3.chr1 88373261 19 + 114275543 ACATAGAGCAGTTCTCTTG i micMur3.chr1 I 2 C 0 s proCoq1.NW_012133858v1 14783479 19 - 22200726 ACACAGAGCAGTTCGCCTG i proCoq1.NW_012133858v1 I 2 C 0 s otoGar3.GL873829 194163 19 + 608964 GAATGGAGTGGGCTGCCTG i otoGar3.GL873829 I 2 C 0 s mm10.chr16 32777565 19 + 98207768 GGATGGAGCTGTCTCTCTG i mm10.chr16 I 1 C 0 s dasNov3.JH569502 2687452 13 - 6579706 GTATGGGGTGGTC------ i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 2308857 113 - 31377067 I a score=3145703.000000 s hg38.chr3_KI270934v1_alt 42213 204 + 163458 GGCTGGCCCGACAGACTTTTTGGG-TAAG-----------------------------------------TCTGGGTAAAC-C-GTGGGGTGATGATACATTTGCTTCTCCCATCTCCAGAACTTCCCTTAAGAGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCATGGCAGAAGTCAACGCCTCGGTCAGTGCTGCAGGCCGCGCTCTGGGTGGGAGGGGGC-GCTTGGCGGGTTCAGGC s panTro5.chr3 2508851 204 - 202621043 GGCTGGCCCGACAGACTTTTTGGG-TAAG-----------------------------------------TCTGGGTAAAC-C-GTGGGGTGATGATACATTTGCTTCTCCCATCTCTAGAACTTCCCTTAAGAGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCATGGCAGATGTCAACGCCTCGGTCAGTGCTGCAGGCCGCGCTCTGGGTGGGAGGGGGC-GCTTGGCGGGTTCAGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103348 204 - 190779 GGCTGGCCCGACAGACTTTTTGGG-TAAG-----------------------------------------TCTGGGTAAAC-C-GTGGGGTGATGATACATTTGCTTCTCCCATCTCCAGAACTTCCCTTAAGAGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCATGGCAGATGTCAACGCCTCGGTCAGTGCTGCAGGCCGCGCTCTGGGTGGGAGGGGGC-GCTTGGCGGGTTCAGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55049 204 - 106623 GGCTGGCCCGACAGACTTTTTGGG-TAAG-----------------------------------------TCTGGGTTAAC-C-CTGGGGTGATGATACATTTGCTTCTCCCATCTCCAGAACTTCCCTTAAGAGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCATGGCAGAGGTCAACGCCTCGGTCAGTGCTGCAGGCCACGCTGTGGGTGGGAGGGGGC-GCTTGGCGGGTTCAGGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830182 204 - 123690457 GGCTGGCCCGACAGACTTTTTGGG-TAAG-----------------------------------------TCTGGGTAAAC-C-GTGGGGTGATGACACATTTGCTTCTCCCATCTCCAGAACTTCCCTTAAGAGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCATGGCAGAGCTCAACGCCTTGGTCAGTGCTGCAGGCCATGCTCTGGGTGGGAGGGGAT-GCTTGGCGGGTTCAGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2326905 205 - 204787373 GGCTGGCCCGACGGACTTCTTGGGTTAAG-----------------------------------------TCTGGGTAAAC-C-GTGGGGTGATGATACATTTGCTTCTCCCATCTCCAGAACCTCCCTTAAGAGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCATGGCAGAGGTCAACGCCTCGGTCAGTGCTGCAGGCCGCGCTCCGGGTGGGAGGGGAC-GCTTGGCGGGTTCAGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192392666 204 - 192460366 GGCTGGCCCGACGGACTTCTTGGG-TAAG-----------------------------------------TCTGGGTAAAC-C-GTGGGGTGATGATACATTTGCTTTTCCCATCTCCAGAACCTCCCTTAAGAGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCATGGCAGAGGTCAACGCCTCGGTCAGTGCTGCAGGCCACGCTCCGGGTGGGAGGGGAC-GCTTGGCGGGTTCAGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19131999 204 - 19675229 GGCTGGCCCGACGGACTTCTTGGG-TAAG-----------------------------------------TCTGGGTAAAC-C-GTGGGGTGATGATACATTTGCTTCTCCCATCTCCAGAACCTCCCTTAAGAGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCATGGCAGAGGTCAACGCCTCGGTCAGTGCTGCAGGCCGCGCTCCGGGTGGGAGGGGAC-GCTTGGCGGGTTCAGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16365318 204 - 16847902 GGCTGGCCCGACGGACTTCTTGGG-TAAG-----------------------------------------TCTGGGTAAAC-C-GTGGGGTGATGATACATTTGCTTCTCCCATCTCCAGAACCTCCCTTAAGAGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCATGGCAGAGGTCAACGCCTCGGTCAGTGCTGCAGGCCGCGCTCCGGGTGGGAGGGGGC-GCTTGGCGGGTTCAGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91337999 204 + 91754291 GGCTGGCCCCACGGACTTCTTGGG-TAAG-----------------------------------------TCTGGGTAAAC-C-GTGGGGTGATGATACATTTGCTTCTCCCATCTCTAGAACCTCCCTTAAGAGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCATGGCAGAGGTCAACGCCTCGGTCAGTGCTGCAGGCCGCGCTCCGGGTGGGAGGGGAC-GCTTGGCGGGTTCAGGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1403478 204 + 1977891 GGCTGGCCCGACGGACTTCTTGGG-TAAG-----------------------------------------TCTGGGTAAAC-C-GTGGGGTGACGATACATTTGCTTCTCCCATCTCCAGAACCTCCCTTAAGAGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCATGGCAGAGGTCAACGCCTCGGTCGGTGCTGCAGGCCGCGCTCCGGGTGGGAGGGGGC-GCTTGGCGGGTTCAGTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7343802 204 - 7796314 GGCTGGCCCGACGGACATCTTGGG-AAAG-----------------------------------------TCTGGGTAAAC-C-GTGGGGTGATGATACATTTGCTTCTCCCATCTCCAGAACCTCCCTTAAGAGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCGTGGCAGAGGTCAACGCCTCGGTCAGTGCTGCAGGCCGTGCTCTGGGTGGGCGGGGAC-GCTTGGCAGGTTCAGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73814963 243 + 74750902 GGCCGACCCAACAAACTTCTTGGG-TAAGTATGGGTAAACCATGGGGTGCTGATGAATTTCCTTCTCCCATCTGTGTAAAC-C-ATGGGGTGATGATGAATTTCCTTCTCCCATCTCCAGAACCTCCCTTAAGAGTCATCCAGCTCTTGCTCAGCGAAGAGGAAAATGCCTCCATGGCAGACATCAACGCCTCGGTCAGTGCTGCAGGCTGCACTCTGGGCGGGAAGGAGA-GCTT--GGGGTTCAGGC i calJac3.chr17 C 0 I 3982 s saiBol1.JH378146 17265935 203 - 17725628 GGCTGGCCCAACAAACTTCTTGGG-TAAG-----------------------------------------TCTGGGTAAAC-C-ATGGGGTGATGATGAATTTCCTTCTCCCATCTCCAGAACCTCCCTTAAGAGTCATCCAGCTCTTGCTCAGCGAAGAGGAAAATGCCTCCATGGCAGACGTCAACGCCTCGGTCAGTGCTGCAGGCTTCGCTCGGGGTGGCAAGGAGA-GCTT-GGGGGTTCAGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6354039 203 + 6778120 GGCTGGCCCAGCAAACTTCTTGGG-TAAG-----------------------------------------TCTGGGTAAAC-C-ACGGGGTGATGATGAATTTCCTTCTCCCATCTCCAGAACCTCCCCTAAGAGTCATCCAGCTCTTGCTCAGCGAAGAGGAAAATGCCTCCATGGCAGACGTCAACGCCTCGGTCAGTGCTACAGGCAGCGCTCTGGGTGGGAAGGAGA-GCTT-GGGGGTTCAGGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 1372 204 + 69927 GGCTGGCCCAACAGACTTCTTGGG-TAAG-----------------------------------------TCTGGGTAAAC-C-ATGGGGCGATGATGAATTTCCTTCTCCCACCTCCAGAACCTCCCTTACGAGTCATCCAGCTCTTGCTCAGCGAAGAGGAAAGTGCCTCCATGGCAGACGTCAACGCCTCGGTCAGTACTGCAGGCTGCGCTCTGGGTGGGAAGGAGA-GCTTGGGGGGTTCAGGC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88373280 204 + 114275543 GACTGGCCCAACGGCCTTCTTGGG-TAAA-----------------------------------------TCTGGGTAAAC-CTGTGAGGTGGTGATGAATTTGTTTCTCTAATCTCCAGAGCTTCCCTTAAGAGTCATCCAGATCTCACTCAGTGAAGACCAAAATGCCTCCATGACAGATGTCAACGCCTCGGTCAGTGCTGTA-GCTGGGGTTAGGGTGGGAGGTGGA-TCTTGGCAGGTTCGGAC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14783498 200 - 22200726 GGCTGGCCCAACGGCCTTCTTGAG-TAAA-----------------------------------------TCTGGGTAAAA-CTGTGAGGTGATGATGAATTTGTCCC----ATCTCCAGAGCTTCCCTTAAGAGTCATCCAGCTCTCACTCAGTGAAGACGAAAATGCCTCCATGGCAGATGTCAACGCCTCGGTCAGTGCTGCA-GCCGGGCTTTGGGAGGGAGGTGGA-TCTTGGCAGGTTCAGGC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 194182 198 + 608964 GGTTTGATAAG------TCTTGGG-TAAG-----------------------------------------TCTGGGTAAAC-CCATGAGGTGATAATGAACTTGTTTCTCCCATCTCTAGAGCTTCCCTTAAGAGTCATCCAGCTCTCACTCATGGAAGATGAAAATGCCTCCAAAGCAGAGGTCAACGCCTCGGTCAGTGCTGCA-GCCAGGCTGTGGGTGGGAGGTGGA-TCTTGGCAGGTTCAGGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32777584 191 + 98207768 AGCC-GCACAGGATAGAAGTTGGA-TAAG-----------------------------------------TCTGGGAACCC-T-CTGGGTCTGAGATGGGTCTTCTTT----ATCTCCAGAGCTTCCCTTAAGGACCATCGTGCTCTCTCTCAGGGAGGATGAAAATGCCTCCGCCGCTGACGTCAACGCCTCGGTCAGTGCTG-------GGCTCCCAGTGGGAAGTGGA-TCTTGAAAGGGTCTCC- i mm10.chr16 C 0 C 0 s canFam3.chr33 2308970 181 - 31377067 GACAGGCCCAGCCACCTCCCCGGG----G-----------------------------------------CCGGGGGTGAC-C-GTGG------------CCTGCGTCTCCCGTTTCCAGGGCTTCCGGTGAGGCTCATCCAGCTCTGGCTCAGTGAAGAAGAAAATGCCTCCGTGGCCGATGTCAACGCCTCGGTCGGTGCTGCAGGCCAG---CAGGGTGGGGAGGCG--GCCTGGCAGG---GGG- i canFam3.chr33 I 113 C 0 s dasNov3.JH569502 2687465 191 - 6579706 ---------------TTTCCCAGG-TGAG-----------------------------------------GCTGGGTAAACGC-ATGAGGCAATTAAGAATCTGCTTCTCCCATCTCCAGAGCTTCCCTCAAGAGTCATCCAGCTTTTGCTCAGTGAGGAAGAGAATGCCTCGATCGCAGAGGTCAACGCCTCGGTCAGTGCTGCAGGCCAGGCTCTGGGTGCGGGGGGGCAGGTTGGCTGATTCAGGG i dasNov3.JH569502 C 0 C 0 a score=1012588.000000 s hg38.chr3_KI270934v1_alt 42417 84 + 163458 -CAGGGCGGAACCATCGCT-------------------------------------GTG--CGGCCTTCATCT-TGTCATCCATCTGGATTCAACTGCCAGAGGAGG-CCGGAGCCTCTTGCCCCA s panTro5.chr3 2509055 84 - 202621043 -CAGGGCGGAACCATCGCT-------------------------------------GTG--TGGCCTTCATCT-TGTCATCCATCTGGATTCAACTGCCAGAGGAGG-CCGGAGCCTCTTGCCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103552 84 - 190779 -CAGGGCGGAACCATCGCT-------------------------------------GTG--TGGCCTTCATCT-TGTCATCCATCTGGATTCAACTGCCAGAGGTGG-CCGGAGCCTCTTGCCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55253 84 - 106623 -CAGGGCAGAACCATCACT-------------------------------------GTG--CGGCCTTCATCT-TGTCATCCATCTGGATTCAACTGCCAGAGGAGG-CCGGAGCCTCTTGCCCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830386 84 - 123690457 -GAGGGCAGGACCATCACT-------------------------------------GTG--TGGCCTTCGTCT-TGTCATCTCTCTGGATTCAACTGCCAGAGGAGG-CCGGAGCCTCTTGCCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2327110 84 - 204787373 -GAGGGCGGAACCATCCCT-------------------------------------GTG--CGGCCTTCATCT-TGTCATCCATCTGGATTCAATTGCCAGAGAAGG-CCGGAGCCTGTTGCCCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192392870 84 - 192460366 -GAGGGCGGAACCATCCCT-------------------------------------GTG--CGGCCTTCATCT-TGTCATCCATCTGGATTCAATTGCCAGAGAAGG-CCGGAGCCTGTTGCCCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19132203 84 - 19675229 -GAGGGCGGAACCATCCCT-------------------------------------GTG--CGGCCTTCATCT-TGTCATCCATCTGGATTCAACTGCCAGAGAAGG-CCGGAGCCTGTTGCCCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16365522 84 - 16847902 -GAGGGCGGAACCATCCCT-------------------------------------GTG--CGGCCTTCATCT-TGTCATCCATCTGGATTCAATTGCCAGAGGAGG-CCGAAGCCTCTTGCCCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91338203 82 + 91754291 -GAGGGCGGAACCATCCCT-------------------------------------GTG--CGGCCTTCATCT-TGTCATCCATCTGGATTCAATTGCC--AGGAGG-CCGGAGCCTCTTGCCCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1403682 84 + 1977891 -GAGGGCGGAACCATCCCT-------------------------------------GTG--CGGCCTTCATCT-TGTCATCCATCTGGATTCAATTGCCAGAGGAGG-CCGGAGCCTCTTGCCCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7344006 84 - 7796314 -GAGGGCGGAACCATCACT-------------------------------------GTG--CGGCCTTCATCT-TCTCATCCATCTGGATTCAATTGCCAGAGGAGG-CCGGAGCCTCTTGCCCCA i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17266138 84 - 17725628 -CGGGGCCGAGCCATCGCC-------------------------------------TGG--CATCCTTCATCT-TGTCATCTATCTGGATTCAACTGCCAGAGGAGG-CCGGAGCCTCTTGCCCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6354242 84 + 6778120 -CAGGGCTGAGCCATCACT-------------------------------------GGG--CACCCTTCATCT-CGTCATCCATCTGGATTCAGTTGCCAGAGGAGG-CCGGAGCCTCTTGCCCCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 1576 84 + 69927 -CAGGGCTGAGCCATCACT-------------------------------------GGC--CATCCTTCATCT-TGTCATCCATCTGGATTCAGTTGAGAGAGGAGG-CCGGAGTCTCTTGCCCCA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88373484 85 + 114275543 -AAGGGCTGAGCCATCACTT------------------------------------GTG--TGTCCTTCATCT-TGTCGTTCATCTCGATTCAATTGCCAGAGGAGG-CCGGATCCTCTTGCTCCA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14783698 85 - 22200726 -AAGGGCTGAGCCATGCCTT------------------------------------GTG--TGTCCTTCATCT-TGTCATTCATCTAGATTCAATTGCCAGAGGAGG-CTGGAGCCTCTTGCTCCA i proCoq1.NW_012133858v1 C 0 I 996 s otoGar3.GL873829 194380 120 + 608964 -AAGAGCC-AGCCATCACTTAAGAGTCCTTCATCTTCaaaaaaattaaaaaaaaaaaaG--AGTCCTTCATCT-TATCATTCATGTAGATTCAATTGCCAGAGGAGG-CAGGAGTCTCTTAACCCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32777775 71 + 98207768 -CAGGG-------ACCTTG-------------------------------------CAG--TAGCTTACA----CATCCTTCAGCTACCTTAATTTCCCAAAGAGGG---GGAGCCTCTTGCCCA- i mm10.chr16 C 0 C 0 s canFam3.chr33 2309151 88 - 31377067 -CAAGCAGGGGCCAGCCCT-------------------------------------GCTCCCGGGCTCCACATCTGCCACCCATCGAGACTTGACTGCCAGAGGAGGCCCAGAGCCTCCTGCCCCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2687656 70 - 6579706 AGTGGGCTGAGCCATCGCT--------------------------------------TG--TGTCCTGCATCT-CAACACCCACCTAGATTCGATTGCCAGGAGTGG-CTGG-------------- i dasNov3.JH569502 C 0 C 0 e calJac3.chr17 73815206 3982 + 74750902 I a score=111056.000000 s hg38.chr3_KI270934v1_alt 42501 8 + 163458 TGGGAGGT s panTro5.chr3 2509139 8 - 202621043 TGGGAGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103636 8 - 190779 TGGGAGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55337 8 - 106623 TGGGAGGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830470 8 - 123690457 TGGGAGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2327194 8 - 204787373 TGGGAGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192392954 8 - 192460366 TGGGAGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19132287 8 - 19675229 TGGGAGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16365606 8 - 16847902 TGGGAGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91338285 8 + 91754291 TGGGAGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1403766 8 + 1977891 TGGGAGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7344090 8 - 7796314 TGGGAGGT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17266222 8 - 17725628 TGGGAGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6354326 8 + 6778120 TGGGAGGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 1660 8 + 69927 TGGGAGGT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88373569 8 + 114275543 GGGGAGGT i micMur3.chr1 C 0 I 710 s otoGar3.GL873829 194500 8 + 608964 TGGGAGGC i otoGar3.GL873829 C 0 I 2 s mm10.chr16 32777846 5 + 98207768 ---GGGGT i mm10.chr16 C 0 I 3 s canFam3.chr33 2309239 7 - 31377067 -AGGAGGG i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 2687726 6 - 6579706 -GGGAGG- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e calJac3.chr17 73815206 3982 + 74750902 I a score=244911.000000 s hg38.chr3_KI270934v1_alt 42509 30 + 163458 GCAG-GGCATTAGGAAGTGAGGAAGGCCCAA s panTro5.chr3 2509147 30 - 202621043 GCAG-GGCATTGGGAAGTGAGGAAGGCCCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103644 30 - 190779 ACAG-GGCATTAGGAAGTGAGGAAGGCCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55345 30 - 106623 GCAG-GGCATTAGGAAGTGAGGAAGGCCCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830478 30 - 123690457 GCAG-GGCATTAGGAAGTGAGGAAGGCCCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2327202 30 - 204787373 GCAG-GGCATTAGGAAGTGAGGAAGGCCGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192392962 30 - 192460366 GCAG-GGCATTAGGAAGTGAGGAAGGCCGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19132295 30 - 19675229 GCAG-GGCATTAGGAAGTGAGGAAGGCCGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16365614 30 - 16847902 GCAG-GGCATTAGGAAGTGAGGAAGGCCGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91338293 30 + 91754291 GCAG-GGCATTAGGAAGTGAGGAAGGCGGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1403774 30 + 1977891 GCAG-GGCATTAGGAAGTGAGGAAGGCCGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7344098 30 - 7796314 GCAG-GGCATTAGGAAGTGAGGAAGGCCGGG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17266230 30 - 17725628 GCAG-GTGGTTAGGAAGTGAGGAAGggccgg i saiBol1.JH378146 C 0 I 311 s cebCap1.NW_016107444v1 6354334 30 + 6778120 GCAG-GTGGTTAGGAAGTGAGGAAGGCTCAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 1668 30 + 69927 GCAG-GGGGTTAGGAGGTGAGGGAGGCCCAG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 194510 17 + 608964 -------------GAAG-GGGTCAGCCTGAG i otoGar3.GL873829 I 2 C 0 s mm10.chr16 32777854 30 + 98207768 TCAA-GGGCCTAGGATGCCAGGAAGCTTCAG i mm10.chr16 I 3 I 1 s canFam3.chr33 2309249 30 - 31377067 GCGGAAGGATGGGGAAGGCAGGAAGCCCAG- i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 2687732 19 - 6579706 ------------GGGGGCCGGGAAAACCCCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e micMur3.chr1 88373577 710 + 114275543 I e calJac3.chr17 73815206 3982 + 74750902 I a score=451333.000000 s hg38.chr3_KI270934v1_alt 42539 50 + 163458 GACAGAAACCTCG-------------------ACTCATCATAAGCAGAGGCCAGGGT-GCCAAGTCACCC s panTro5.chr3 2509177 50 - 202621043 GACAGAAACCTCG-------------------ACTCATCATAAGCAGAGGCCAGGGT-GCCAAGTCACCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103674 50 - 190779 GACAGAAACCTCG-------------------ACTCATCATAAGCAGAGGCCAGGGT-GCCAAGTCACCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55375 50 - 106623 GACAGAAACCTCG-------------------ACTCATCATAAGCAGAGGCCAGGGT-GCCAAGTCACCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830508 50 - 123690457 GACAGAAACCTCG-------------------ACTCATCATAAGCAGAGGCCAGGAT-GCCAAGTCACCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2327232 50 - 204787373 GACAGAAACCTCA-------------------GCTCACCACAAGCAGAGGCCAGGGT-GCCAAGTCACCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192392992 50 - 192460366 GACAGAAACCTCA-------------------GCTCACCACAAGCAGAGGCCAGGGT-GCCAAGTCACCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19132325 50 - 19675229 GACAGAAACCTCA-------------------GCTCACCACAAGGAGAGGCCAGGGT-GCCAAGTCACCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16365644 50 - 16847902 GACAGAAACCTCA-------------------GCTCACCACAAGCAGAGGCCAGGGT-GCCAAGTCACCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91338323 50 + 91754291 GACAGAAACCTCA-------------------ACTCACCATAAGCAGAGGCCAGGGT-GCCAAGTCACCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1403804 50 + 1977891 GACAGAAACCTCA-------------------ACTCACCACAAGCAGAGGCCAGGGT-GCCAAGTCACCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7344128 45 - 7796314 GACAGAAACCTCA-------------------ACTCACCATAAGCAGAGACCAGGGT-GC-----CACCC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17266571 69 - 17725628 GACAGAAACCTCAGAAGGGGCTGGAGTCACCAACTCGTCATGAGCAGAGGCCGGGGT-GCCAAGTCACCC i saiBol1.JH378146 I 311 I 7 s cebCap1.NW_016107444v1 6354364 68 + 6778120 GACAGAAACCTCAGAAGGGGTTGGAGTCACCAACTCATCATGAGCAGA-GCCAGGGT-GCCAAGTCACCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 1698 67 + 69927 GAC--AAATCTCAGAAGGGGCTGGAGTCACCGACTCATCGTGAGCAGAGGCCGGGGT-GCCAAGTCACCC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 194527 36 + 608964 GACAGAGATTTTG---------------------------------GAGGTTAGGGT-GCCAAGGTACCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32777885 69 + 98207768 ATTAGAGACCACAGAATGTGTTAGAATCACCAGCTTGCCCTGAGAAGAATCTCGGGT-GGCACGTCACTC i mm10.chr16 I 1 C 0 s canFam3.chr33 2309279 56 - 31377067 GACAGTGACCCCCCAGGG--------------GACTGGAATAACTCGGGTGTAGGGTGGCCGAGTCACCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2687751 69 - 6579706 GGCAGAGACCTCAGAAAGGGTTGGAATGACCAACTCTCCATGGTCAGGGTCAAAGGCGGCCAAGTCATC- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e micMur3.chr1 88373577 710 + 114275543 I e calJac3.chr17 73815206 3982 + 74750902 I a score=2661600.000000 s hg38.chr3_KI270934v1_alt 42589 313 + 163458 CAGCCGAGACCTCTAAG------------------CATCTTGGTTATGATCTGAAAG---AA--ACTaaa-g--gacatttcacctcccgggagtcttccctgacttcccagagggaacgggcggctccctcttcttggctgccATG--------C-------CATACCTCAGTCACAGGCAAAGTGGCACAACTGCTGAGTGGTTGgggctgtagaatcctgcacacccagaatcagaatccctgctctgcccc----------------------tcactagagcaggtgtgctaactagacacatcatataacaggtcatctgtaaacacag----ggacaatc----atagcacctgagtcaacaggccgtatcaccgtt s panTro5.chr3 2509227 313 - 202621043 CAGCCGAGACCTCTAAG------------------CATCTTGGTTATGATCTGAAAG---AA--ACTaaa-g--gacatttcacctcccgggagtcttccctgacttcccagagggaacaggcggctccctcttcttggctgccATG--------C-------CATACCTCAGTCACAGGCAAAGTGGCACAACTGCCGAGTGGTTGgggctgtagaatcctgcacacccagaatcagaatccctgctctgcccc----------------------tcactagagcaggtgtgctaactagacacatcatataacaggtcatctgtaaacacag----ggacaatc----atagcacctgagtcaacaggccgtatcaccgtt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103724 313 - 190779 CAGCCGAGACCTCTAAG------------------CATCTTGGTTATGATCTGAAAG---AA--ACTAAA-G--GACATTTCACCTCCCGGGAGTCTTCCCTGACTTCCCAGAGGGAACCGGCGGCTCCCTCTTCTTGGCTGCCATG--------C-------CATACCTCGGTCACAGGCAAAGTGGCACAACTGCCGAGTGGTTGgggctgtagaatcctgcacacccagaatcagaatccctgctctgcccc----------------------tcactagagcaggtgtgctaactagacacatcatataacaggtcatctgtaaacacag----ggacaatc----atagcacctgagtccacaggccgtatcaccgtt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55425 313 - 106623 CAGCCGAGACCTCTAAG------------------CATCTTGGTTATGATCTGAAAG---AA--ACTAAA-G--GACatttcacctcctgggagtcttccctgacttcccagagggaacgggcggctccctcttcttggctgccATG--------C-------CATACCTCAGTCACAGGCAAAGTGGCACAACTGCCGAGTGGTTGgggctgtagaatcctgcacacccggaatcagaatccctgctctgcccc----------------------tcactagagcagttgtgctaactagacacatcatgtaacaggtcatctgtaaacacag----ggacagtc----atagcacctgagtcaacaggccgtatcaccgtt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830558 312 - 123690457 CAGCTGAGACCTCTAAG------------------CTTCCTGGTTATGATCTGAAAG---AA--ACTaaa-g--gacatttcacctccagggagtcttccctgacttccaagagggaactggcagctccctcttcttggctgccATG--------C-------CATACCTCAGTCACaggcaaagtggcgcaactgccgagtggttggggctctagaatcctgcacacccagaatcagaatccctgctctgcccc----------------------tcactagagcag-tgtgctaactagacacatcatataacaggtcatctgtaaacacag----ggacaatc----atagcacctgagtcaacaggctgtatcaccatt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2327282 313 - 204787373 CAGCCGAGACCTCTAAG------------------CATCTCGGGTATGACCTGGAAG---AA--ACCAAA-G--GACGTTTCAcctccagggagtcttccctgacttcccagagggaactgggtgctccctgctcttggcttccatG--------C-------CATACCCCAATCACAGGCAAAGTTGCACAACTGCCGAGTGTTTGAggctctagcatcctgcacacccagaatcaaaacctctgcgctgcccc----------------------tcactagagcaggtatgttaattacacacattatgtaacaggtcatctgtaaacacag----ggacaagc----atagcacctgagtcaacaggctgtctcaccgtt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192393042 313 - 192460366 CAGCCGAGACCTCTAAG------------------CATCTCGGGTATGACCTGGAAG---AA--ACCAAA-G--GACGTTTCAcctccagggagtcttccctgacttcccagagggaactgggtgctccctgctcttggcttccatG--------C-------CATACCCCAATCACAGGCAAAGTTGCACAACTGCCGAGTGTTTGAggctctagcatcctgcatacccagaatcaaaacctctgcgctgcccc----------------------tcactagagcaggtatgttaattacacacattatgtaacaggtcatctgtaaacacag----ggacaagc----atagcacctgagtcaacaggctgtctcaccgtt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19132375 313 - 19675229 CAGCCGAGACCTCTAAG------------------CATCTCGGGTATGACCTGGAAG---AA--ACCAAA-G--GACGTTTCAcctccagggagtcttccctgacttcccagagggaactgggtgctccctgctcttggcttccatG--------C-------CATACCCCAATCACAGGCAAAGTTGCACAACTGCCGAGTGTTTGAggctctagcatcctgcacacccagaatcaaaacctctgcgctgcccc----------------------tcactagagcaggtatgttaattacacacattatgtaacaggtcatctgtaaacacag----ggacaagc----atagcacctgagtcaacaggctgtctcaccgtt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16365694 313 - 16847902 CAGCCGAGCCCTCTGAG------------------CATCTCGGGTATGACCTGGAAG---AA--ACCAAA-G--GGCGTTTCGCCTCCAGGGAGTCTTCCCGGACTTCCCAGAGGGAACGGGGTGCTCCCTGCTCTTGGCGTCCATG--------C-------CATACCCCAATCACAGGCAAAGTTGCACAACTGCCGAGTGTTTGAggctctagcatcgtgcacacccagaatcaaaatctctgcgctgcccc----------------------tcactagagcaggtatgttaattacacacattatataacaggtcatctgtaaacgcag----ggacaagc----atagcacctgagtcaacaggctgtctcaccgtt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91338373 310 + 91754291 CATCCGAGACCTCTAAG------------------CATCTCGGGTATGATCTGGAAG---AA--ACGAAA-G--GACGTTTCAcctccaggcagtcttccctgacttcccagagggaactgggtgctccctgttcttggcttccatG--------C-------CATACCCCAATCACAGGCAAAGTTGCACAACTGCCGAGTGTTTGAggctctagaatcctgcacacccagaatcaaaatctctgcgctgctcc----------------------tcactagagcaggcatgttaattacacac---atgtaacaggtcatctgtaaacacag----ggacaagc----acagcacctgagtcaacaggctgtctcaccgtt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1403854 312 + 1977891 CAGCCGAGCCCTCTGAG------------------CATCTCGGGTATGACCTGGAAG---AA--ACCAAA-G--GACGTTTCGcctccagggagtcttcccggacttcccagagggaacggggtgctctctgctcttggcttccagg--------c-------cata-cccaatcacAGGCAAAGTTGCACAACGGCCGAGTGTTTGAggctctagaatcctgcacacccagaatcaaaatctctgtgctgcccc----------------------tcactagagcaggtacgttaattacacacattatataacaggtcatctgtaaacgcag----ggacaagc----atagcaccagagtcgacaggctgtctcaccgtt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7344173 313 - 7796314 CAGCCGAGACCGCTAAG------------------CATCTTGGGTATGATCTGGAAG---AA--ACGAAA-G--GACATTTCAcctccagggagtcttccctgacttcccagagagaactgggtgctccctgttcttggcttccatg--------c-------cacACCTCAATCACAGGCAAAGTGGCACAACTGCTGAGTGGCTGAggctctagaatcctgcacacccagattcaaaatctctgcactgtccc----------------------tcactagagcaggtatgttaattagacacattatataacaggtcctctgtaaacacag----ggacaatc----acagcacctgaggcaacaggctgtctcaccgtt i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 6354432 327 + 6778120 CAGCCTCTCCCTCTAAGAATCTCTCAGGACCTGTACTTCTTGGGTGTTATCTGGAAG---AA--AACAAA-G--GGCATTTCACGtccagggagtcttccctggcttcccagagggaactgggggctct---gtcttggctcccatg--------c-------caTACCTCAGTCACAGGCAAAGTAGCGCAATTGCTGAGTTGTTGCAGctct-gaatcctgcacacccagattcaaaacccctgccctgccac----------------------tcactagaacaagtgtgctaattagacacattatataacgggtcatctgtaaacacag----ggacagtc----atagcacctgagtcaataggttgtatcaccgtt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 1765 322 + 69927 CAGCCTCTCCCTCTAAGAATATCTCCGGACCTGTACTTCTTGGGTGTTATCTGGAAG---AA--AATaaa-g--ggcatttcacctccagggagtcttccctgacttcccagagggaactgggggctcc---gtcttggctcccGTG--------C-------CATACCTCAGTCACAGGCAAAGTAGCACAATTGCCGAATGGCTGCAGCCCCAGAGTCCTGCACG-GCAGATTCACAACCCCTGCCCTGCTG------------------------CACTAGAACAAGTGTACTAATTAGAC-CATCATATAACGGGtcatctgtaaacacag----ggacaatc------agcacctgagtcaacaggttgtatcaccatt i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 194563 326 + 608964 CCACCTCTACCTCTAAGCACCTCTCAAAACTTGTACTTCTTGGGTAGTATATGGAAG---AA--CCTAGATG--GACATTTCACCTCCATGGAGCCAT-CCAGACTTCCCAGAGGGAATTGGA-GCTCCCTCTTCTTGGCTCCCATG--------CCCTAGTTCACACCTCAATCACAGGCAAAGtagcacagctgttgagtg-ctgaagctctagaatcccac----------ttcaaattcctgctcagccac----------------------ttactggagtaggtgtcataatttaacacataatgcagcaggtcatctgcagatgtag----ggacaata----atagtacctatgtcaatagactgtagcaaggTT i otoGar3.GL873829 C 0 M 868 s mm10.chr16 32777954 310 + 98207768 CAGTCTGTCCCTCTGGGTACTCCTCATGATTCGCACTCTCTGGCTGCTATATGGcag---aa---------g--------tcacctcc---------tccctgattccccaaagggcacagggacccctct-------gataccatgacctc-gtc-------tatatccccat--taagcaAAGTAGCCAGATTGGTGAATGGCAGGACCTCTAGACTCCTATACA-CAGGAACCTGAAACTCTACCCTGCCTC----------------------TCTCTAGAGCAGGAGCAATAATTAAACAAGTTATTTA---TATCAActttgtatataaaagtggacgatagtaagtagtacc--ggtcagtaggttgtattaagatt i mm10.chr16 C 0 C 0 s canFam3.chr33 2309335 361 - 31377067 CAGCCTC-CCTCCTGAGTGTCCCTAGAGACTTG--CA-CTTGGGTGTCATATGGTATTTCAA--CCCCAG-GAAGGTATTTCAcctccaggaagccctcctcgacttcccagagggaaccagcagctccttcctcttggccccgtaggcccctgtc-------catCCCTCAACCACACGCCAAgtagcacaatagctgaagcgctgaggctccagagtcatacatacccgggttctaatcctctagaacattccctagaacaggtgcaataatcattccctagaacaggtgcaataattagacaaactatttgatgtctcatctgtaaa-gtag----aaataccc----ataatacctgtgtcaacgggttgtgtcaaggtt i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2687820 331 - 6579706 GAGCCCCTCCCTATGAGCGTCCTTCAACATCTGCACTTGTTGGATATTATAAAGAAG---AAACACcaga-g--ggcatggcgcctctcggaagccttccctgacttcccaaagagagctgggggcttcctcttcttggctgccatg-cccttgtc-------tatacctcagtcatagGCAAAGGagcacagttattgag-ggtgtaagctataaagccctaaacacctg--attcaactccctgctctacctc----------------------ttactggaattgtgacc----ttaggcaaattacgtagt--ctcacttgtaaaggtag----gaataata----atagtacctgggtcgatgggttgtgttaaggtt i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e micMur3.chr1 88373577 710 + 114275543 I e saiBol1.JH378146 17266640 7 - 17725628 I e calJac3.chr17 73815206 3982 + 74750902 I a score=33848.000000 s hg38.chr3_KI270934v1_alt 42902 3 + 163458 taa s panTro5.chr3 2509540 3 - 202621043 taa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104037 3 - 190779 taa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55738 3 - 106623 gaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830870 3 - 123690457 taa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2327595 3 - 204787373 taa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192393355 3 - 192460366 taa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19132688 3 - 19675229 taa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16366007 3 - 16847902 taa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91338683 3 + 91754291 taa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1404166 3 + 1977891 taa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7344486 3 - 7796314 taa i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 6354759 3 + 6778120 taa i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 2087 3 + 69927 taa i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32778264 3 + 98207768 taa i mm10.chr16 C 0 C 0 s canFam3.chr33 2309696 3 - 31377067 taa i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2688151 3 - 6579706 taa i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e micMur3.chr1 88373577 710 + 114275543 I e saiBol1.JH378146 17266640 7 - 17725628 I e calJac3.chr17 73815206 3982 + 74750902 I e otoGar3.GL873829 194889 868 + 608964 M a score=13923.000000 s hg38.chr3_KI270934v1_alt 42905 1 + 163458 a s panTro5.chr3 2509543 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104040 1 - 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55741 1 - 106623 a i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830873 1 - 123690457 a i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2327598 1 - 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192393358 1 - 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19132691 1 - 19675229 a i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16366010 1 - 16847902 a i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91338686 1 + 91754291 a i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1404169 1 + 1977891 a i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7344489 1 - 7796314 a i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73819188 1 + 74750902 A i calJac3.chr17 I 3982 C 0 s cebCap1.NW_016107444v1 6354762 1 + 6778120 a i cebCap1.NW_016107444v1 C 0 I 380 s aotNan1.NW_018503669v1 2090 1 + 69927 a i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32778267 1 + 98207768 a i mm10.chr16 C 0 C 0 s canFam3.chr33 2309699 1 - 31377067 a i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2688154 1 - 6579706 a i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e micMur3.chr1 88373577 710 + 114275543 I e saiBol1.JH378146 17266640 7 - 17725628 I e otoGar3.GL873829 194889 868 + 608964 M a score=36256.000000 s hg38.chr3_KI270934v1_alt 42906 3 + 163458 tga s panTro5.chr3 2509544 3 - 202621043 tga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104041 3 - 190779 tga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55742 3 - 106623 tga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830874 3 - 123690457 tga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2327599 3 - 204787373 tga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192393359 3 - 192460366 tga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19132692 3 - 19675229 tga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16366011 3 - 16847902 tga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91338687 3 + 91754291 tga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1404170 3 + 1977891 tga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7344490 3 - 7796314 tga i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73819189 3 + 74750902 TAA i calJac3.chr17 C 0 C 0 s aotNan1.NW_018503669v1 2091 3 + 69927 tga i aotNan1.NW_018503669v1 C 0 I 381 s mm10.chr16 32778268 3 + 98207768 tga i mm10.chr16 C 0 C 0 s canFam3.chr33 2309700 3 - 31377067 tga i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2688155 3 - 6579706 tga i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e micMur3.chr1 88373577 710 + 114275543 I e saiBol1.JH378146 17266640 7 - 17725628 I e cebCap1.NW_016107444v1 6354763 380 + 6778120 I e otoGar3.GL873829 194889 868 + 608964 M a score=9090.000000 s hg38.chr3_KI270934v1_alt 42909 1 + 163458 t s panTro5.chr3 2509547 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104044 1 - 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55745 1 - 106623 t i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830877 1 - 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2327602 1 - 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192393362 1 - 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19132695 1 - 19675229 t i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16366014 1 - 16847902 t i cerAty1.NW_012004056v1 C 0 I 532 s chlSab2.chr15 91338690 1 + 91754291 t i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1404173 1 + 1977891 t i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7344493 1 - 7796314 t i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73819192 1 + 74750902 C i calJac3.chr17 C 0 C 0 s mm10.chr16 32778271 1 + 98207768 t i mm10.chr16 C 0 C 0 s canFam3.chr33 2309703 1 - 31377067 t i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2688158 1 - 6579706 t i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e aotNan1.NW_018503669v1 2094 381 + 69927 I e micMur3.chr1 88373577 710 + 114275543 I e saiBol1.JH378146 17266640 7 - 17725628 I e cebCap1.NW_016107444v1 6354763 380 + 6778120 I e otoGar3.GL873829 194889 868 + 608964 M a score=403897.000000 s hg38.chr3_KI270934v1_alt 42910 83 + 163458 aacgcgtgtcaagcatttagtccagtgcctgacacacaa-----gtattcaaacatgatg---actgctattatCACT---ACTGCAAGCCTAG s panTro5.chr3 2509548 83 - 202621043 aacgcgtgtcaagcatttagtccagtgcctgacacacaa-----gtattcaaacatgatg---actgctattatCACT---ACTGCAAGCCTAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104045 83 - 190779 aacgcgtgtcaagcatttagtccagtgcctgacacacaa-----gtattcaaacatgatg---actgctattatCACT---ACTGCAAGCCTAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55746 83 - 106623 aatgtgtgtcaagcatttagtccaatgcctgacacacaa-----gtattcaaacatgatg---actgctatgatCACT---ACTGCAAGCCTAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830878 80 - 123690457 aacgtgtgtcaagcatttagtccagtgcctgacacacaa-----gtattcaaacatgat------tgctattattACT---ACTGCAAGCCTAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2327603 80 - 204787373 ---gtgcgtcaagcatttagtacggtgcccgacacgcaa-----gtattcaaacattgta---attgctattattACT---ACTGCACACATAG i rheMac8.chr2 C 0 I 392 s macFas5.chr2 192393363 80 - 192460366 ---gtgcgtcaagcatttagtacggtgcccgacacacaa-----gtattcaaacattgta---attgctattattACT---ACTGCACACATAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19132696 80 - 19675229 ---gtgcgtcaagcatttagtacggtgcccgacacgcaa-----gtattcaaacattgta---attgctattattACT---ACTGCACACATAG i macNem1.NW_012014355v1 C 0 I 421 s chlSab2.chr15 91338691 80 + 91754291 ---gtgcgtcaagcatttagtacggtgcccgacacgcaa-----gtattcaaacattcta---attgctattattACT---ACTGCAAGCATAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1404174 80 + 1977891 ---gtgcgtcaagcatttagtaccatgcccgacatgcaa-----gtattcaaacattgta---attgctattattACT---ACTGCACACATAG i manLeu1.NW_012102020v1 C 0 I 671 s colAng1.NW_012118932v1 7344494 80 - 7796314 ---gtgcgtcaagcatttagtacggtgcccgacaggcca-----gtattcaaaccttgta---attgctattattACT---ACTGCAAGCATAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73819193 76 + 74750902 AATGCATGTAAAGC----AGTATGGTGGCCGACACACAG-----GTATTCGAAAACTAT------TTTTGTTATTACT---GCTGTTAGCGTGG i calJac3.chr17 C 0 C 0 s mm10.chr16 32778272 81 + 98207768 -aatagtgtaaagcacttagta------ctgaaacacaacaggcataattcaaagtgatt---attactATTAATACCCTGACTGCCAGAG--- i mm10.chr16 C 0 C 0 s canFam3.chr33 2309704 86 - 31377067 aatgtatgtaaagcgcttaccatggtgcctaaaatacaa-----gtgctcaaaaattataATGATAATAATTATTCCT---ACTGCTGGTACAA i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 2688159 76 - 6579706 aatgtatgt-----atttagtacagtgcctgaaacacaa--tacttgttctaaaa--------agtactgctgctact---actgttactatag i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e aotNan1.NW_018503669v1 2094 381 + 69927 I e micMur3.chr1 88373577 710 + 114275543 I e saiBol1.JH378146 17266640 7 - 17725628 I e cebCap1.NW_016107444v1 6354763 380 + 6778120 I e otoGar3.GL873829 194889 868 + 608964 M e cerAty1.NW_012004056v1 16366015 532 - 16847902 I a score=33709.000000 s hg38.chr3_KI270934v1_alt 42993 5 + 163458 CACTC s panTro5.chr3 2509631 5 - 202621043 CACTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104128 5 - 190779 CACTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55829 5 - 106623 cactc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830958 5 - 123690457 CACTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2328075 5 - 204787373 cactc i rheMac8.chr2 I 392 C 0 s macFas5.chr2 192393443 5 - 192460366 cactc i macFas5.chr2 C 0 I 358 s macNem1.NW_012014355v1 19133197 5 - 19675229 cactc i macNem1.NW_012014355v1 I 421 C 0 s chlSab2.chr15 91338771 5 + 91754291 CACTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1404925 5 + 1977891 CACTC i manLeu1.NW_012102020v1 I 671 C 0 s colAng1.NW_012118932v1 7344574 5 - 7796314 cactc i colAng1.NW_012118932v1 C 0 I 49 s calJac3.chr17 73819269 5 + 74750902 CACTC i calJac3.chr17 C 0 C 0 s canFam3.chr33 2309793 2 - 31377067 CA--- i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 2688235 5 - 6579706 cactc i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e mm10.chr16 32778353 0 + 98207768 C e aotNan1.NW_018503669v1 2094 381 + 69927 I e micMur3.chr1 88373577 710 + 114275543 I e saiBol1.JH378146 17266640 7 - 17725628 I e cebCap1.NW_016107444v1 6354763 380 + 6778120 I e otoGar3.GL873829 194889 868 + 608964 M e cerAty1.NW_012004056v1 16366015 532 - 16847902 I a score=14563.000000 s hg38.chr3_KI270934v1_alt 42998 9 + 163458 --CCCACTCCA s panTro5.chr3 2509636 9 - 202621043 --CCCACTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104133 9 - 190779 --CCCACTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55834 9 - 106623 --cccactcca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830963 9 - 123690457 --CACATTCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2328080 9 - 204787373 --cccactccc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192393806 9 - 192460366 --cccactccc i macFas5.chr2 I 358 C 0 s macNem1.NW_012014355v1 19133202 9 - 19675229 --cccactccc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16366547 9 - 16847902 --cccactccc i cerAty1.NW_012004056v1 I 532 C 0 s chlSab2.chr15 91338776 9 + 91754291 --CCCACTCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1404930 9 + 1977891 --CCCACTCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7344628 9 - 7796314 --cccactccc i colAng1.NW_012118932v1 I 49 C 0 s calJac3.chr17 73819274 3 + 74750902 ----CAT---- i calJac3.chr17 C 0 C 0 s mm10.chr16 32778353 6 + 98207768 ---ACATTA-- i mm10.chr16 C 0 C 0 s canFam3.chr33 2309795 4 - 31377067 --TCTA----- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2688240 9 - 6579706 gacaccctc-- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e aotNan1.NW_018503669v1 2094 381 + 69927 I e micMur3.chr1 88373577 710 + 114275543 I e saiBol1.JH378146 17266640 7 - 17725628 I e cebCap1.NW_016107444v1 6354763 380 + 6778120 I e otoGar3.GL873829 194889 868 + 608964 M a score=26678.000000 s hg38.chr3_KI270934v1_alt 43007 3 + 163458 CAC s panTro5.chr3 2509645 3 - 202621043 CAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104142 3 - 190779 CAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55843 3 - 106623 cac i gorGor5.CYUI01000576v1 C 0 I 238 s nomLeu3.chr11 2830972 3 - 123690457 CAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2328089 3 - 204787373 cac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192393815 3 - 192460366 cac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19133211 3 - 19675229 cac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16366556 3 - 16847902 cac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91338785 3 + 91754291 CAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1404939 3 + 1977891 CAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7344637 3 - 7796314 cac i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 6355143 3 + 6778120 CAC i cebCap1.NW_016107444v1 I 380 C 0 s aotNan1.NW_018503669v1 2475 3 + 69927 CAC i aotNan1.NW_018503669v1 I 381 C 0 s mm10.chr16 32778359 3 + 98207768 AAT i mm10.chr16 C 0 C 0 s canFam3.chr33 2309799 3 - 31377067 GAC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e micMur3.chr1 88373577 710 + 114275543 I e dasNov3.JH569502 2688249 0 - 6579706 C e saiBol1.JH378146 17266640 7 - 17725628 I e calJac3.chr17 73819277 0 + 74750902 C e otoGar3.GL873829 194889 868 + 608964 M a score=31397.000000 s hg38.chr3_KI270934v1_alt 43010 3 + 163458 TCC s panTro5.chr3 2509648 3 - 202621043 TCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104145 3 - 190779 TCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56084 3 - 106623 tcc i gorGor5.CYUI01000576v1 I 238 C 0 s nomLeu3.chr11 2830975 3 - 123690457 TCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2328092 3 - 204787373 tcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192393818 3 - 192460366 tcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19133214 3 - 19675229 tcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16366559 3 - 16847902 tcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91338788 3 + 91754291 TCC i chlSab2.chr15 C 0 I 884 s manLeu1.NW_012102020v1 1404942 3 + 1977891 TCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7344640 3 - 7796314 tcc i colAng1.NW_012118932v1 C 0 I 35 s cebCap1.NW_016107444v1 6355146 3 + 6778120 TCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 2478 3 + 69927 TCC i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32778362 3 + 98207768 CCC i mm10.chr16 C 0 C 0 s canFam3.chr33 2309802 2 - 31377067 -CC i canFam3.chr33 C 0 I 1 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e micMur3.chr1 88373577 710 + 114275543 I e dasNov3.JH569502 2688249 0 - 6579706 C e saiBol1.JH378146 17266640 7 - 17725628 I e calJac3.chr17 73819277 0 + 74750902 C e otoGar3.GL873829 194889 868 + 608964 M a score=1218968.000000 s hg38.chr3_KI270934v1_alt 43013 170 + 163458 ACACGGTAAAATCTGTTGACATTTGTCACCTGCGCCAGACAATGCACTC-TTTGAGTTTAGACTCCACCTAAGTCACCTTGACACCCCCAGCCCC-GACCATCTCCTAG----GTCT------AAACAA----CCC------ATGTTCAATATAC--------TGGGGAG-------GAGGTCATGAGTCATGTGTCAGAGGCAAGG s panTro5.chr3 2509651 171 - 202621043 ACATGGTAAAAtctgttgacatttgtcacctgcgccagacaatgcactc-tttgagtttagactccacctaagtcaccttgacacccccagcccctgacCATCTCCTAG----GTCT------AAACAA----CCC------ATGTTCAATATAC--------TGGGGAG-------GAGGTCATGAGTCATGTGTCAGAGGCAAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104148 171 - 190779 ACatggtaaaatctgttgacatttgtcacctgcgccagacaatgcactc-tttgagtttagactccacctaagtcaccttgacacccccagcccctgaccatctcctag----gtct------aaacaa----ccc------atgttCAATATAC--------TGGGGAG-------GAGGTCATGAGTCATGTGTCAGAGGCAAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56087 171 - 106623 acacGGTAAAAtctgttgacatttgtcatctgcgccagacaatgcactc-tttgagtttagactccacctaagtcaccttgacacccctagcccctgacCATCTCCTAG----GTCT------AAACAA----CCC------ATGTTCAATATAC--------TGGGGAG-------GAGGTCATGAGTCATGCGTCAGAGGCAAGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2830978 170 - 123690457 ACACGGTAAAATCTGTTGACATTTGTCACCTGCGCCAGACAATGCACTC-TTTGAGTTTACACTCCACCTAAGTCACCTTGACACCCCCAGCCCCTGACCATCTCCTAG----GTCT------AAACAA----CCC------ATGTTCAATATAC---------GGGGAG-------GAGGTCATGAGTCATGCATCAGAGGCAAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2328095 166 - 204787373 ACGTGGTAAAATCTGTTGACATTTGTCACCTGCACCAGACTATGCACTC-TTTGAGTTTAGACTCCACCTAAGTCACCTTGACACCCACAGCCCCTGACCACCTCCTAG----GTCT------ACTTAA----CCC------ATGTTCAGTATAC--------TGTGGAG-------G-GGTCATGAGTCATGCAGCAGAGGC---- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192393821 166 - 192460366 ACGTGGTAAAATCTGTTGACATTTGTCACCTGCACCAGACTATGCACTC-TTTGAGTTTAGACTCCACCTAAGTCACCTTGACACCCACAGCCCCTGACCATCTCCTAG----GTCT------ACTTAA----CCC------ATGTTCAGTATAC--------TGTGGAG-------G-GGTCATGAGTCATGCATCAGAGGC---- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19133217 166 - 19675229 ACGTGGTAAAATCTGTTGACATTTGTCACCTGCACCAGACTATGCACTC-TTTGAGTTTAGACTCCACCTAAGTCACCTTGACACCCACAGCCCCTGACCACCTCCTAG----GTCT------ACTTAA----CCC------ATGTTCAGTATAC--------TGTGGAG-------G-GGTCATGAGTCATGCATCAGAGGC---- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16366562 166 - 16847902 acaTGGTAAAATCTGTTGACATTTGTCACCTGCACCAGACTATGCACTC-TTTGAGTTTAGACTCCACCTAAGTCACCTTGACACCCCCAGCCCCTGACCACCTCCTAG----GTCT------ACTTAA----CCC------ATGTTCAGTATAC--------TGTGGAG-------G-GGTCATGAGTCATGCATCAGAGGC---- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1404945 166 + 1977891 ACGTGGTAAAATCTGTTGACATTTGTCACCTGCACCAGACTATGCACTC-TTTGAGTTTAGACTCCACCTAAGTCACCTTGACACCCCCAGCCCCTGACCACCTCCTAG----GTCT------ACTTAA----CCC------ATGTTCAGTATAC--------TGTGGAG-------G-GGTCATGAGTCATGCATCAGAGGC---- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7344678 167 - 7796314 acaTGGTAAAAtctgttgacatttgtcacctgcaccagactatgcactcttttgagtttagactccacctaagtcaccttgacacccccagcccctgAGGATCTCCTAG----GTCT------ACTTAA----CCC------ATGTTCAGTATAC--------TGGGGAG-------G-GGTCATGAGTCATGCATCAGAGGC---- i colAng1.NW_012118932v1 I 35 C 0 s calJac3.chr17 73819277 167 + 74750902 -----GTAAAATCTGTTGCCATTTGTCACCTGCACCAGACTATGCACTC---TGAATTTAGACTCCTCCTAAGTCACCTTGACACCTGCAGCACCTGACCAGCTCCTACTTCTGCCT------AAACAA----TCG------ATGTCCAATATAC--------TGGGGCA-------GGGGCCAAGAGTCGTGGACCAGAGGC-AAG i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 6355149 173 + 6778120 ACATGGTGAGAtctgctgacagctgtcacctgcaccagactgcgcactc-tttgaagttagactcctcctaagtcaccttgacacccgcagc-cccgaccacctcctagTTCTGCCT------AAACAA----TCG------ATGTCCAATGTGC--------TGGGGCA-------GGGGCCAAAAGTTGTGGATCAGAGGC-AAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 2481 174 + 69927 ACGTGGTAAAAtctgtcgacacttgtcacctgcaccagactgtgcactc-tttgaatttagactcctcctaagtcaccttgacacccgcagcacctgacCACCTCCTAGTTCTGTCT------AGACCA----TCG------ATGTCTGATATAC--------TGGGGCA-------GGGGCCAAGGGTCGTGGATCAGAGGC-AAG i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32778365 153 + 98207768 AACGAATCAGGTCTGATGACATTCATCTGCTGCCCTTGACCAAAGGCTC-TTTGGATATAA--------CAGG------TGACATTCCTGGCACCTGGACATCTCTAGG----GCTT------AGCTGAAGAGTTT------GTGTTTGGTACA---------TATGAGG-------GTGGACTGGGATCAGAGAT-GGAG------ i mm10.chr16 C 0 C 0 s canFam3.chr33 2309805 166 - 31377067 GTAAGGGGAAGTCCGTTGACACCTGTCTACTTCACCA-ACTAGGGGTCT-TT---------------CCTGAGTCAGCTTGAC--CCCCAGCACCCGACCATCCCCTAG----GTCTAGCTGGACATAA----TCA------ATGTTTAAAAACA--------TGTGGGGCGAGAACGAGAGCGTGAGTCAGGGGGCGGAGGCAAAG i canFam3.chr33 I 1 I 1 s dasNov3.JH569502 2688249 178 - 6579706 -----gtaaaatctgttgacatttgtccattgcaccagaatgtgtgctc-tgtgagtacggccagttcctaagccgtcctgacaccc-cagcacGAGGCCAGCCCTTAG----GTTT------ACTTAA----ACCTAACAGATACCCACCAGACACGTGGTGTGGGGAA-------TAGTGGGTGGGTCAGGGATCAGAAGTAAG- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e micMur3.chr1 88373577 710 + 114275543 I e saiBol1.JH378146 17266640 7 - 17725628 I e otoGar3.GL873829 194889 868 + 608964 M e chlSab2.chr15 91338791 884 + 91754291 I a score=122388.000000 s hg38.chr3_KI270934v1_alt 43183 25 + 163458 TAGGGGCCATTCATGTCAGATTCTC s panTro5.chr3 2509822 25 - 202621043 TAGGGGCCATTCATGTCAGATTCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104319 25 - 190779 TAGGGGCCATTCATGTCAGATTCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56258 25 - 106623 TAGGGGCCATTCATGTCAGATTCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2831148 25 - 123690457 TAGGGGCCATTCATGTCAGATTCCC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73819444 25 + 74750902 GAGGGGCCATGCACATCAGATTCTC i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 6355322 25 + 6778120 GAGGGGCCACGCACGTCAGATCCTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 2655 25 + 69927 GAGGGGCCGTGCACATCAGATCCTC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88374287 25 + 114275543 TAGGGGCCATTCATGTCAGATTCTC i micMur3.chr1 I 710 I 250 s otoGar3.GL873829 195767 25 + 608964 TAGGGACCATTTGTGTCAGATTCTT i otoGar3.GL873829 M 868 C 0 s mm10.chr16 32778518 24 + 98207768 -CAGAGATGTTCGTCTCACATGTTC i mm10.chr16 C 0 C 0 s canFam3.chr33 2309972 25 - 31377067 TAGGGGCCACTCATTTCAGATTCCC i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2688427 25 - 6579706 TCGGGGCCATTCATTTCAGGTTCTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e macNem1.NW_012014355v1 19133383 0 - 19675229 C e saiBol1.JH378146 17266640 7 - 17725628 I e colAng1.NW_012118932v1 7344845 0 - 7796314 C e manLeu1.NW_012102020v1 1405111 0 + 1977891 C e chlSab2.chr15 91338791 884 + 91754291 I e cerAty1.NW_012004056v1 16366728 0 - 16847902 C e macFas5.chr2 192393987 0 - 192460366 C e rheMac8.chr2 2328261 0 - 204787373 C a score=36086.000000 s hg38.chr3_KI270934v1_alt 43208 12 + 163458 TGCTCGTCATAT s panTro5.chr3 2509847 12 - 202621043 TGCTCGTCATAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104344 12 - 190779 TGCTCGTCATAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56283 12 - 106623 TGCTCGTCATAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2831173 12 - 123690457 CGCTCGTCATAT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73819469 12 + 74750902 CGCTTGTCATAT i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 6355347 12 + 6778120 CGCTTGTCATAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 2680 12 + 69927 CGCTTGTCATGT i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 195792 12 + 608964 GTCTTGTAAGAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32778542 12 + 98207768 CCCTGGCAACAT i mm10.chr16 C 0 C 0 s canFam3.chr33 2309997 12 - 31377067 CCCTTGTCATGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2688452 11 - 6579706 -ATTTGTAACAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e micMur3.chr1 88374312 250 + 114275543 I e macNem1.NW_012014355v1 19133383 0 - 19675229 C e saiBol1.JH378146 17266640 7 - 17725628 I e colAng1.NW_012118932v1 7344845 0 - 7796314 C e manLeu1.NW_012102020v1 1405111 0 + 1977891 C e chlSab2.chr15 91338791 884 + 91754291 I e cerAty1.NW_012004056v1 16366728 0 - 16847902 C e macFas5.chr2 192393987 0 - 192460366 C e rheMac8.chr2 2328261 0 - 204787373 C a score=1708305.000000 s hg38.chr3_KI270934v1_alt 43220 218 + 163458 GAGGCTGAGG--GGGGG--ACAGAATGGAAAACCCttcactct-caacaaacatt-attaagcaaggacccatgacactcactgagctaggctagagtgcaagggtgcagagacaggtgaggaaggtgctg-gg-gt-----------------------------------------------------------------cctggggctcccgttccaggaggaa-----acag----ggatgaataCACCCAT-----------------------------------------------------------------------------------------------------------------CAAGGTGGGA--------GGGC-GTCTCCCCCCCGGATGGGGCCT---CA--CCCCCA s panTro5.chr3 2509859 217 - 202621043 GAGGCCGAGG--CGGGG--ACAGAATGGAAAACCCTTCACTCT-CAACAAACATT-ATTAAGCAAGGACCCGTGACACTCACTGAGCTAGGCTAGAGTGCAAGGGTGCAGAGACAGGTGAGGAAGGTGCTG-GG-GT-----------------------------------------------------------------CCTGGGGCTCCCGTTCCAGGAGGAA-----ACAG----GGATGAATACACCCAT-----------------------------------------------------------------------------------------------------------------CAAGGTGGGA--------GGGC-GTC-ACCCCCTGGATGGGGCCT---CA--CCCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104356 217 - 190779 GAGGCCGAGG--CGGGG--ACAGAATGGAAAACCCTTCACTCT-CAACAAACATT-ATTAAGCAAGGACCCGTGACACTCACTGAGCTAGGCTAGAGTGCAAGGGTGCAGAGACAGGTGAGGAAGGTGCTG-GG-GT-----------------------------------------------------------------CCTGGGGCTCCCGTTCCAGGAGGAA-----ACAG----GGATGAATACACCCAT-----------------------------------------------------------------------------------------------------------------CAAGGTGGGA--------GGGC-GTC-ACCCCCTGGATGGGGCCT---CA--CCCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56295 217 - 106623 GAGGCCGAGG--GGGGG--ACAGAATGGAAAACCCTTCACTCT-CAACAAACATT-ATTAAGCAAGGACCCATGACACTCACTGAGCTAGGCTAGAGTGCAAGGGTGCAGAGACAGGTGAGGAAGGTGCTG-GG-GT-----------------------------------------------------------------CCTGGGGCTCCCGTTCCAGGAGGAA-----ACA-----GGATGAATACACCCAT-----------------------------------------------------------------------------------------------------------------CAAGGTGGGA--------GGGC-GTCTCCCCCCTGGATGGGGCCT---CA--CCCCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2831185 219 - 123690457 GAGGCCAAGGA-GGGGG--ACAGAATGGAAAACCCTTCACTCT-CAACAAACATT-ATGAAACAAGGACCCATGACAGTCACTGAGCTAGGCCAGAGTGTGAGGGTGCAGAGACAGGTGAGGAAGGTGCTG-GG-GT-----------------------------------------------------------------CCTAGGGCTTGCGTTCCAGGAGGAA-----ACAG----GGATGAATACACCCAT-----------------------------------------------------------------------------------------------------------------CAAGGTGGGA--------GGGG-GTCTCCCCCCTGGATGGGTCCT---CA--CCCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2328261 283 - 204787373 GAGGCTGAGGA-GGGGG--ACAGAATGGAAAACCCTTCACTCA-CAACAAACGTT-ATTAAGCAAGGACCCGCGACAGTCACTGGGCTAGGTTAGAGTGCGAGGATGCAGAGAC-GGTGAGGAATGTGCTG-GG-GT-----------------------------------------------------------------CCTGGGGCTCCCGTTCCAGGAGGAA-----ACAG----GGATGAATACACCCATCAAGGTGGGAGGGGGTCTCCCCTGGGGCTC------------------------------------------------CTGTTCCAGGAGGAAACAGGGATGAATACACCCATCAAGGTGGGA--------GGGG-ATCTCCCCTCTGGATGGGGCCT---CA--CCCCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192393987 302 - 192460366 GAGGCTGAGGA-GGGGG--ACAGAATGGAAAACCCTTCACTCA-CAACAAACATT-ATTAAGCAAGGACCCGCGACAGTCACTGGGCTAGGTTCGAGTGCGAGGATGCAGAGAC-GGTGAGGAATGTGCTG-GG-GT-----------------------------------------------------------------CCTGGGGCTCCCGTTCCAGGAGGAA-----ACAG----GGATGAATACACCCATCAAGGTGGGAGGGGGTCTCCCCTGGGGCTCCTGTTCCAGGAGGAAACAGG---GATGAATACATGCATCAAGGTGTATGTATT---------------GATG-----------CAAGGTGGGA--------GGGG-ATCTCCCCTCTGGATGGGGCCT---CA--CCCCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19133383 283 - 19675229 GAGGCTGAGGA-GGGGG--ACAGAATGGAAAACCCTTCACTCA-CAACAAACATT-ATTAAGCAAGGACCCACGACAGTCACTGGGCTAGGTTAGAGTGCGAGGATGCAGAGAC-GGTGAGGAATGTGCTG-GG-GT-----------------------------------------------------------------CCTGGGGCTCCCGTTCCAGGAGGAA-----ACAG----GGATGAATACACCCATCAAGGTGGGAGGGGGTCTCCCCTGGGGCTCCTGTTCCAGGAGGAAACAGGGATGA---ATACACCCAT---------------------------------------------CAAGGTGGGA--------GGGG-ATCTCCCCTCTGGATGGGGCCT---CA--CCCCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16366728 218 - 16847902 GAGGCTGAGGA-GGGGG--ACAGAATGGAAAACCCTTCACTCA-CAACAAACATT-ATTAAGCAAGGACCCGCGATAGTCACTGGGCTAGGTTAGAGTGGGAGGATGCAGAGAC-GGTGAGGAATGTGCTG-GG-GT-----------------------------------------------------------------CCTGGGGCTCCCGTTCCAGGAGGAA-----ACAG----GGATGAATACACCCAT-----------------------------------------------------------------------------------------------------------------CAAGGTGGGA--------GGGG-ATCTCCCCTCTGGATGGGGCCT---TA--CCCCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91339675 282 + 91754291 GAGGCTGAGGA--GGGG--ACAGAACGGAAAACCCTTCACTCA-CAACACACATT-ATTAAGCAAGGACCCGCGACAGTCACTGGGCTAGGTTAGAGTGCGAGGATGCAGAGAC-GGTGAGGAATGTGCTG-GG-GTCCTGCGGCTCCCGTTCCAGGAGGAAACAGGGATGGATACACCCATCCAGGTGGGAGGGGGTCTCCCCTGGGGCTCCTGTTCCAGGAGGAA-----ACAG----GGATGAATACATGCAT-----------------------------------------------------------------------------------------------------------------CAAGGTGGGA--------GGGG-GTCTCCCCTCTGGATGGGGCCT---CA--CCCCCA i chlSab2.chr15 I 884 C 0 s manLeu1.NW_012102020v1 1405111 218 + 1977891 GAGGCTGAGGA-GGGGG--ACAGAATGGAAAACCCTTCACTCA-CAACAAACATT-ATTAAGTAAGGACCCGCGACAGTCACTGGGCTAGGTTAGAGTGCGAGGATGCAGAGAT-GGTGAGGAATGTGCTG-GG-GT-----------------------------------------------------------------CCTGGGGCTCCCGTTCCAGGGGGAA-----ACAG----GGATGAATACACCCAT-----------------------------------------------------------------------------------------------------------------CAAGGTGGGA--------GGGG-ATCTCCCCTCTGGATGGGGCCT---CA--CCCCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7344845 217 - 7796314 GAGTCTGAGGA-GGGCG--ACAGAATGGAAAA-CCGTCACTTA-CAACCGACATT-ATTAAGCAAGGACCGGAGACAGTCACTGGGCTAGGTTAGAGTGCGAGGATGCAGAGAT-GGTGAGGAATGTGCTG-GG-GT-----------------------------------------------------------------CCTGAGGCTCCCATTCCACGGGGAA-----ACAG----GGATGAATACACGCAT-----------------------------------------------------------------------------------------------------------------CAAGGTGGGA--------GGGG-GTCTCCCCTCTGGATGGCGCCT---CA--CCCCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73819481 215 + 74750902 GAGGCCTAGGA-TGGGG--AGAGAATGGAAAACCCTCCCCTC----ACAAATATT----AAACAAGGACCCGTGACCGTCACTGGACTAGGCTAGAGGGCGAGGATGCAGAGATAGGTGAGAAATGTATCC-AG-GT-----------------------------------------------------------------CCTGGGACTCACATTCAAGGAGGAA-----ACAG----GGGTGAATAAACGGAT-----------------------------------------------------------------------------------------------------------------CAAGGCGGGA--------GAGG-CTCTCCTCTGTGTATGGGGCCT---CACCCACCCA i calJac3.chr17 C 0 I 257 s cebCap1.NW_016107444v1 6355359 211 + 6778120 GAGGCCTAGGA--GGGG--AGAGAATGGAAAACGCTTCCCTCA-CAACAAATATT--------AAGGACCCGTGACAGTCACTGGACTAGGCCAGAGGGCGAGGATGCGGAGCTGGGCGAGCCATGTGTCC-GG-GT-----------------------------------------------------------------CCTGGGACTCACATTCAAGGAGGAA-----ACAG----GGATGAACAAACGCGT-----------------------------------------------------------------------------------------------------------------CAAGGTGGGG--------GAGG-CTCTCCTCTCTGGATGGGGCCT---CA--CACCCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 2692 202 + 69927 GAGGCCTAGGA--GGGG--AGAGAATGGAAAACCCTTCCCTCA-CGACAAACGTT----AAACGAGGACCTGTGACAGTCACTGGACTAGGCTAGAGGGCGAGGACGCAGAGATGGGTGAGGAATGTGT--------------------------------------------------------------------------------CTCACATTCAAGGAGGAA-----ACAG----GGATGAATAAACGCAT-----------------------------------------------------------------------------------------------------------------CAAGGTGGGA--------GAGG-CTCTCCTCTCTGGATGGGGCCT---CA--CACCCG i aotNan1.NW_018503669v1 C 0 I 21 s otoGar3.GL873829 195804 234 + 608964 GAGGCAGAGGAGGGGGG--AAATTATGTTGGTCCttcatttgc-caacaactatt-attcagtgaggacctacaccagtccctggactaggctaggttatgaggatacagagatgggtgagaattatctgg-gg-at-----------------------------------------------------------------cctggagttcacattcaaaggcaaaaacagacaA----TGATGAATAAATGCATC----------------------------------------------------------------------------------------------------------------CTTGGGGGGATGAGTTAGGGAG-GTTTCCTCCCTGGACTGGGTCT---CA--CCACCC i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32778554 171 + 98207768 ----TATGGCA-GAAGG--GAAGAATGCCACATTCTTCACCCA-CTGAATAT-TT-ATTAAGCAAGGACCCAGGTCAGTCACTGACCTGAGCCTGGGTGTGGGAATGAAAAG---AGCAA----------------------------------------------------------------------------------TCTAGGCCCCACATTC-------AA-----A---------------------AT----------------------------------------------------------------------------------------------------------------------TGGGA--------GAGACCTCTCTAATCCTCATTAGGCCTATATC--CTCCCA i mm10.chr16 C 0 I 1 s canFam3.chr33 2310009 214 - 31377067 GAGGCAGGGA--GGTGT--GCAGAGT-------CCTTGACTCTCCAGCAAATGTTCAGTAAGCAGGGACCCACGAGGGCCACCAGGCTAGGCTGGGGCGTGGGGATGCAGAT---GGTGAGAAGCAGTCTGTGG-GT-----------------------------------------------------------------CCTGGTGCTCGTGTGCAAAACGGAG-----CCAGATGTGGACAAATAAGTACAT-----------------------------------------------------------------------------------------------------------------GCAAGTGGGA--------GAGG--TGTCCTCTTCGGGTGGGGCCT---CA--CTCCCA i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 2688463 215 - 6579706 AAGGCAGAGGA-GGAGGAAAAAGAAAGTCAAGTCCTTCACTCACCAGCAAATACTCATTCAGTGGGGATCCCTGCGGGTTGCTGGGGTAGGCTAGAATGTGGGGATGAAGAGAT-GAGGGAAAACGTTCTG-GACAC-----------------------------------------------------------------CCTGGGGCTCACGTTCAAAGAAGAAAGCAAACAG----GGATGAAGAAATGCTT-----------------------------------------------------------------------------------------------------------------TAAAG-------------GGGG-GCCTCCCCTCTGGA-----------CA--CCCACT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e micMur3.chr1 88374312 250 + 114275543 I e saiBol1.JH378146 17266640 7 - 17725628 I a score=64058.000000 s hg38.chr3_KI270934v1_alt 43438 11 + 163458 CC--CCCATCTGC s panTro5.chr3 2510076 11 - 202621043 CC--CCCATCCGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104573 11 - 190779 CC--CCCATCCGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56512 11 - 106623 CC--CCCATCCGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2831404 11 - 123690457 CC--CCCATCCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2328544 13 - 204787373 CCCGCCCATCCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192394289 13 - 192460366 CCCGCCCATCCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19133666 13 - 19675229 CCCGCCCATCCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16366946 13 - 16847902 CCTGCCCATCCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91339957 13 + 91754291 CCCGCCCATCCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1405329 13 + 1977891 CCCGCCCATCCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345062 13 - 7796314 CCCGCCCATCCCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73819953 11 + 74750902 CC--CCCATTCCC i calJac3.chr17 I 257 I 1 s cebCap1.NW_016107444v1 6355570 11 + 6778120 CC--CCCACCGCC i cebCap1.NW_016107444v1 C 0 I 15 s aotNan1.NW_018503669v1 2915 11 + 69927 CC--CCCATTCCC i aotNan1.NW_018503669v1 I 21 I 1 s otoGar3.GL873829 196039 13 + 608964 TCACTCCATCCCT i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32778726 9 + 98207768 CC--CCCATCT-- i mm10.chr16 I 1 C 0 s canFam3.chr33 2310225 10 - 31377067 CC--CCCACCCC- i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 2688678 7 - 6579706 ---CTCCCTC--- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e micMur3.chr1 88374312 250 + 114275543 I e saiBol1.JH378146 17266640 7 - 17725628 I a score=17100.000000 s hg38.chr3_KI270934v1_alt 43449 1 + 163458 C s panTro5.chr3 2510087 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104584 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56523 1 - 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2831415 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2328557 1 - 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192394302 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19133679 1 - 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16366959 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91339970 1 + 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1405342 1 + 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345075 1 - 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73819965 1 + 74750902 C i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17266647 1 - 17725628 C i saiBol1.JH378146 I 7 C 0 s cebCap1.NW_016107444v1 6355596 1 + 6778120 C i cebCap1.NW_016107444v1 I 15 C 0 s aotNan1.NW_018503669v1 2927 1 + 69927 C i aotNan1.NW_018503669v1 I 1 C 0 s otoGar3.GL873829 196052 1 + 608964 C i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2310235 1 - 31377067 C i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2688685 1 - 6579706 C i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I e mm10.chr16 32778735 0 + 98207768 C e micMur3.chr1 88374312 250 + 114275543 I a score=104352.000000 s hg38.chr3_KI270934v1_alt 43450 9 + 163458 ATCCTCTAA s panTro5.chr3 2510088 9 - 202621043 ATCCTCTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104585 9 - 190779 ATCCTCTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56524 9 - 106623 ATCCTCTGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2831416 9 - 123690457 ATCCTCTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2328558 7 - 204787373 ATC--CTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192394303 9 - 192460366 ATCCTCTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19133680 9 - 19675229 ATCCTCTGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16366960 9 - 16847902 ATCCTCTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91339971 9 + 91754291 ATCCTCTGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1405343 9 + 1977891 ATCCTCTGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345076 9 - 7796314 ATCCTCTGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73819966 9 + 74750902 ATCCTCTGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17266648 9 - 17725628 GTCCTCTGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6355597 9 + 6778120 GTCCCCTGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 2928 9 + 69927 ATCCTCTGC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88374562 9 + 114275543 ATCCTCTGC i micMur3.chr1 I 250 C 0 s otoGar3.GL873829 196053 9 + 608964 ACCCTCTGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32778735 8 + 98207768 -TCCTCCAT i mm10.chr16 C 0 C 0 s canFam3.chr33 2310236 8 - 31377067 ATCCT-TGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2688686 9 - 6579706 ATCCTCCAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14783783 996 - 22200726 I a score=1453696.000000 s hg38.chr3_KI270934v1_alt 43459 84 + 163458 CCTAGGTGGCATACAGACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCCAAGTGGA------ACGAATGTAAGTGGGACTGT s panTro5.chr3 2510097 84 - 202621043 CCTAGGTGGCATACAGACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCCAAGTGGA------ACGAATGTAAGTGGGACTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104594 84 - 190779 CCTAGGTGGCATACAGACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCCAAGTGGA------ACGAATGTAAGTGGGACTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56533 84 - 106623 CCTAGGTGGCATACAGACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCCAAGTGGA------ACGAATGTAAGTGGGACTGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2831425 84 - 123690457 CCTAGGTGGCATACAGACTGGGATCCCTGGACATGCGGGCCTTTCTCCACAACAGCCAAGTGAA------ACAAATGTAAGTGGGACTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2328565 84 - 204787373 CCTAGGTGGCATACATACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCCAAGTGAA------CCGAATGTAAGTGGGACTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192394312 84 - 192460366 CCTAGGTGGCATACATACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCCAGGTGAA------CCGAATGTAAGTGGGACTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19133689 84 - 19675229 CCTAGGTGGCATACATACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCCAAGTGAA------CCGAATGTAAGTGGGACTGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16366969 84 - 16847902 CCTAGGTGGCATACATACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCCAAGTGAA------CCGAATGTAAGTGGGACTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91339980 84 + 91754291 CCTAGGTGGCGTACATACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCCAAGTGAA------CCGAATGTAAGTGGGACTGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1405352 84 + 1977891 CCTAGGTGGCGTACATACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCCAAGTGAA------CCGAATGTAAGTGGGACTGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345085 84 - 7796314 CCTAGGTGGCATACATACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCCAAGTGAA------CCGAATGTAAGTGGGACTGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73819975 84 + 74750902 CCTAGGTGGCGTACAGACTGCGGACCCTGCACGGGCAGGCCTTTCTCTACAACAGCGAAGTGAA------CCAAATGTAAGTGGGACGGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17266657 84 - 17725628 CCTAGGTGTCATACAGACTGCGGACCCTGCGCGTGCGGGCCTTTCTCTACAACAGCGAAGTGAA------CCGAATGTAAGTGGGACGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6355606 84 + 6778120 CCTAGGTGGCATACAGACTGCGGACCCTGCACGTGCGGGCCTTTCTCTACAACAGCGAAGTGAA------CCCAATGTAAGTGGGACGGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 2937 84 + 69927 CCTAGGTGGCATACAGACTGCGGACCCTCCACGTGCGGGCCTTTCTCTACAACAGCGAAGTGAA------CCGAATGTAAGTGGGACGGT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88374571 84 + 114275543 CCTAGGTGGCATACAGACTGGGGACCCTGGCGGTGCGGGCCTTTCTCCAGAACAGCAAAGTGGA------GCTAATGTAAGTGGGACTGT i micMur3.chr1 C 0 I 81 s proCoq1.NW_012133858v1 14784779 84 - 22200726 CCTAGGTGGCATACAGACTGGGGACCCTGGCGGTGCGGGCCTTTCTCCAGAACAGCAAAGTGGA------ACAAATGTAAGTCGGACTGT i proCoq1.NW_012133858v1 I 996 I 83 s otoGar3.GL873829 196062 84 + 608964 CCTAGGTGGCGTACAGACTAGAGACCCTGGAGGTGCGGGCCTTTCTCCAGAACAGCCAAGTGGA------ACGAATGTAAGTGGGACTGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32778743 88 + 98207768 TGTAGGTGGCGAACATACTAGAGAACCTGGACATGCGGGCTTTTTTCTCCAACAGCTTAGTGGAACTGATACGAACGTAAGTGAAGCT-- i mm10.chr16 C 0 C 0 s canFam3.chr33 2310244 84 - 31377067 CCTAGGTGGCCTACAGACTGGGGAACCTGAATGTGCGGGCCTTTCTCCAGAACTCCGAAGTGCT------ACAGATGTAAGTGGGACTGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2688695 84 - 6579706 CCCAGGTGGCATACAGGCTGGGGACCCTGGAGGTGCGGGCCTTTCTCCGGAACAGCCTGGTGGA------ACGGGTGTAAGTGGGGCTGt i dasNov3.JH569502 C 0 C 0 a score=276181.000000 s hg38.chr3_KI270934v1_alt 43543 30 + 163458 GT--CCCCCTAag----cccccagat-ctcttcctca s panTro5.chr3 2510181 30 - 202621043 GT--CCCCCTGAG----CCCCCAGAT-CTCTTCCTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104678 30 - 190779 GT--CCCCCTGAG----CCCCCAGAT-CTCTTCCTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56617 30 - 106623 GT--CCCCCTGag----cccccagat-ctcttcctca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2831509 31 - 123690457 GT--CTCCCTGAG----CCCCCAGATCCTCTTCCTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2328649 31 - 204787373 GT--CCCCCTGAG----CCCCCAGGTCCTCTTCCTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192394396 31 - 192460366 GT--CCCCCTGAG----CCCCCAGGTCCTCTTCCTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19133773 31 - 19675229 GT--CCCCCTGAG----CCCCCAGGTCCTCTTCCTCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367053 31 - 16847902 GT--CCCCCTGAG----CCCCCAGGTCCTCTTCCTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340064 32 + 91754291 GTC-CCCCCTGAG----CCCCCAGGTCCTCTTCCTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1405436 31 + 1977891 GT--CCCCCTGAG----CCCCCAGGTCCTCTTCCTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345169 31 - 7796314 GT--CCCCTTGAG----CCCCCAGGTCCTCTTCCTCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820059 30 + 74750902 G---ACCCCTGAG----CCCCCACGTCTTCTTCCTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17266741 30 - 17725628 G---ACCCCTGAG----CCCCCAGGTCTTCTTCCTCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6355690 29 + 6778120 G---ACCCCCGAG-----CCCCAGGTCTTCTTCCTCA i cebCap1.NW_016107444v1 C 0 I 14 s aotNan1.NW_018503669v1 3021 30 + 69927 G---AGCCCTGAG----CCCCCGGGTCTTCTTCCTCA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 196146 31 + 608964 --CCCTGCCTGAG----TCCCCAGGTCTTCTTTCCCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32778831 25 + 98207768 GT--CCCCCATGG----CTCCC-----CTCTCCCTC- i mm10.chr16 C 0 C 0 s canFam3.chr33 2310328 25 - 31377067 ----CCCCCTTGG----CCCCCGCGT-CTCCCCC--- i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 2688779 23 - 6579706 -----cccctggggtctcccctgggtct--------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14784863 83 - 22200726 I e micMur3.chr1 88374655 81 + 114275543 I a score=89189.000000 s hg38.chr3_KI270934v1_alt 43573 28 + 163458 ------------tccccca--------cccccagccccccaccccccc s panTro5.chr3 2510211 36 - 202621043 ------------Tcccccacccccagccccccagccccccagcccccc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104708 28 - 190779 ------------TCCCCCA--------CCCCCAGCCCCCCAGCCCCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56647 27 - 106623 ------------tcccccg--------cccccag-cccccagcccccC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2831540 27 - 123690457 ------------TCCCCCA--------CCCCCAGCCCCCCAG-CCCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2328680 21 - 204787373 ------------TCCCCCG--------CTCCCTG-------GCCCCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192394427 21 - 192460366 ------------TCCCCCG--------CTCCCTG-------GCCCCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19133804 21 - 19675229 ------------TCCCCCG--------CTCCCTG-------GCCCCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367084 21 - 16847902 ------------TCCCCCG--------CTCCCTG-------GCCCCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340096 21 + 91754291 ------------TCCCCCG--------CTCCCTG-------GCCCCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1405467 21 + 1977891 ------------TCCCCCG--------CTCTCTG-------GCCCCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345200 21 - 7796314 ------------TCCCCCG--------CTCCCTG-------GCCCCCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820089 17 + 74750902 ----------------CCG--------GCCCCCA-------GCCCCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17266771 17 - 17725628 ----------------CCG--------GCCCCCG-------GCCCCCC i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 3051 17 + 69927 ----------------CCG--------GCCCCCA-------GCCCCCC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 196177 21 + 608964 ------------TCTCATG--------TTGCTCA-------CTTCCTC i otoGar3.GL873829 C 0 I 3 s mm10.chr16 32778856 21 + 98207768 ------------TCTCCTG--------CTCCTCA-------AACCCCC i mm10.chr16 C 0 C 0 s canFam3.chr33 2310355 20 - 31377067 ------------CCACCTG--------CACCCTT-------ACCACC- i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 2688802 31 - 6579706 cccctACCGCAGCCCCGCA--------ACCCTCA-------GCCTC-- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14784863 83 - 22200726 I e micMur3.chr1 88374655 81 + 114275543 I e cebCap1.NW_016107444v1 6355719 14 + 6778120 I a score=369016.000000 s hg38.chr3_KI270934v1_alt 43601 30 + 163458 TCACCGTTGCCCT----CCCACACAGCGATTCTG s panTro5.chr3 2510247 30 - 202621043 TCACCGTTGCCCT----CCCACACAGCGATTCCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104736 30 - 190779 TCACCGTTGCCCT----CCCACACAGCGATTCCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56674 30 - 106623 TCACCGTTGCCCT----CCCACACAGCGATTCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2831567 30 - 123690457 TCACTGTCGCCCT----CCCACACAGCGATTCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2328701 30 - 204787373 TCACCGTCACCCT----CCCACACAGCGATTCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192394448 30 - 192460366 TCACCGTCACCCT----CCCACACAGCGATTCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19133825 30 - 19675229 TCACCGTCACCCT----CCCACACAGCGATTCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367105 30 - 16847902 TCACCGTCACCCT----CCCACACAGCGATTCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340117 30 + 91754291 TCACCGTCACCCT----CCCACACAGCGATTCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1405488 30 + 1977891 TCACCGTCACCCT----CCCACACAGCGATTCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345221 30 - 7796314 TCACTGTCACTCT----CCCACACAGCAATTCCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820106 30 + 74750902 TCACCGTTGCCCT----CCCATACAGCGATTCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17266788 30 - 17725628 TCACCGTGGCCCT----CCCGTGCAGCGATTCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6355733 30 + 6778120 TCACCGTCACCCT----CCCACACAGCGATTCCC i cebCap1.NW_016107444v1 I 14 C 0 s aotNan1.NW_018503669v1 3068 29 + 69927 TCACCGTCGCCCC----CCC-TACAGCAATTCCC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 196201 29 + 608964 -----GCCCCCCTGCTCCCCACACAGCAACTCTT i otoGar3.GL873829 I 3 C 0 s mm10.chr16 32778877 29 + 98207768 -CACTGTACCCCT----TCCATACAGCTCTCCCG i mm10.chr16 C 0 I 1 s canFam3.chr33 2310375 30 - 31377067 TCACGGTGCCCCT----CCCACGCAGCAATTCCA i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 2688833 33 - 6579706 TCACTGTCTCCCTGCC-CCCCCCCAGCACTGCCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14784863 83 - 22200726 I e micMur3.chr1 88374655 81 + 114275543 I a score=19000.000000 s hg38.chr3_KI270934v1_alt 43631 1 + 163458 C s panTro5.chr3 2510277 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104766 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56704 1 - 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2831597 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2328731 1 - 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192394478 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19133855 1 - 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367135 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340147 1 + 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1405518 1 + 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345251 1 - 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820136 1 + 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17266818 1 - 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6355763 1 + 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 3097 1 + 69927 C i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14784946 1 - 22200726 C i proCoq1.NW_012133858v1 I 83 C 0 s otoGar3.GL873829 196230 1 + 608964 C i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2310408 1 - 31377067 C i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 2688866 1 - 6579706 C i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32778906 1 + 98207768 I e micMur3.chr1 88374655 81 + 114275543 I a score=3353866.000000 s hg38.chr3_KI270934v1_alt 43632 206 + 163458 AGCACCGGCCTCGGGAAGCCCCATCCAACACTGGATGGTCATCTCGGAGTTCCAGTACCGCCCTCGGGGCCCGGTCATTGACTTCCTGAACAACCAGCTGCTGGCCGCGGTGGTGGAGGCGTTCTTATACCAC---GTTCC------------ACGGAGGAGTGAGGAGCCCAGGAACGACGTGGTCTTCCAGCCCATCTCCGGGGAAGACGTGCGCGATG s panTro5.chr3 2510278 206 - 202621043 AGTACCGGCCTCGGGAAGCCCCATCCAACACTGGATGGTCATCTCGGAGTTCCAGTACCGCCCTCGGGGCCCCGTCATTGACTTCCTGAACAACCAGCTGCTGGTCGCGGTGGTGGAGGCGTTCTTATACCAC---GTTCC------------ACGGAGGAGTGAGGAGCCCAGGAACGACGTGGTCTTCCAGCCCATCTCCAGGGAAGACGTGCGCGACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104767 206 - 190779 AGTACCGGCCTCGGGAAGCCCCATCCAACACTGGATGGTCATCTCGGAGTTCCAGTACCGCCCTCGGGGCCCCGTCATTGACTTCCTGAACAACCAGCTGCTGGTCGCGGTGGTGGAGGCGTTCTTATACCAC---GTTCC------------ACGGAGGAGTGAGGAGCCCAGGAACGACGTGGTCTTCCAGCCCATCTCCAGGGAAGACGTGCGCGACG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56705 206 - 106623 AGTACCGGCCTCGGGAAGCCCTGTCCAACACTGGATGGTCATCTCGGAGTTCCAGTACCGCCCTCGGGGCCCGGTCATTGACTTCCTGAACAACCAGCTGCTGGCCGCGGTGGTGGAGGCGTTCTTATACCAC---GTTCC------------ACGGAGGAGTGAGGAGCCCAGGAACGACGTGGTCTTCCAGCCCATCTCCAAGGAAGACGTACGCGATG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2831598 206 - 123690457 AGCACCGGCCTCGGGAAGCCCCATTCAACACTGGGTAGTCATCTCAGAGTTCCAGTACCGCCCTCGGGGCCCTGTCATCGACTTCCTGAACAACCAGCTGCTGGCCGCGGTGGTGGAGGCGTTCTTATACCAT---GTTCC------------ACGGAGGAGTGAGAAGCCCAGGAATGACGTGGTCTTCCAGCCCATCTCCAGGGAAGACGTGCGCGACG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2328732 206 - 204787373 AGCACCTGCCTCGGGAAGCCCCATTCAACACTGGATGGTCATCTCGGAGTTCCAGTACCGCCCTTGGGGCCCCGTCATCGACTTCCTGAACAACCAGCTGCTGGCTGCGGTAGTGGAGGCGTTCTTCTACCAG---GTTCC------------ACGGAGGAGGGAGGAGTCCAGGAACCATGTGGTCTTCCAGCCCATCTCCAGGGAAGACGTGTGGGATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192394479 206 - 192460366 AGCACCTGCCTCGGGAAGCCCCATTCAACACTGGATGGTCATCTCGGAGTTCCAGTACCGCCCTTGGGGCCCCGTCATCGACTTCCTGAACAACCAGCTGCTGGCTGCGGTAGTGGAGGCGTTCTTCTACCAG---GTTCC------------ACGGAGGAGGGAGGAGTCCAGGAACCACGTGGTCTTCCAGCCCATCTCCAGGGAAGACGTGTGGGATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19133856 206 - 19675229 AGCACCTGCCTCGGGAAGCCCCATTCAACACTGGATGGTCATCTCGGAGTTCCAGTACCGCCCTTGGGGCCCCGTCATCGACTTCCTGAACAACCAGCTGCTGGCTGCGGTAGTGGAGGCGTTCTTCTACCAG---GTTCC------------ACGGAGGAGGGAGGAGTCCAGGAACCACGTGGTCTTCCAGCCCATCTCCAGGGAAGACGTGTGGGATG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367136 206 - 16847902 AGCACCGGCCTCGGGAAGCCCCATTCAACACTGGATGGTCATCTCGGAGTTCCAGTACCGCCCTTGGGGCCCCGTCATCGACTTCCTGAACAACCAGCTGCTGGCTGCGGTGGTGGAGGCGTTCTTATACCAG---GTTCC------------ACCGAGGAGGGAGGAGTCCAGGAACCACGTGGTCTTCCAGCCCATCTCCGGGGAAGACGTGTGGGATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340148 206 + 91754291 AGCACCGGCCTCGGGAAGCCCCATTCAACACTGGAGGGTCATCTCGGAGTTCCAGTACCGCCCTTGGGGCCCCGTCATCGACTTCCTGAACAACCAGCTGCTGGCTGCAGTGGTGGAGGCGTTCTTATACCAG---GTTCC------------ACGGAGGAGTGAGGTGTCCAGGAACCACGTGGTCTTCCAGCCCATCTCCAGGGAAGACGTGTGGGATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1405519 206 + 1977891 AGCACCTGCCTCGGGAAGCCCCATTCAACACTGGATGGTCATCTCGGAGTTCCAGTACCGCCCTTGGGGCCCGGTCATCGACTTCCTGAACAACCAGCTGCTGGCTGCGGTGGTGGAGGCGTTCTTATACCAG---GTTCC------------ACGGAGGAGGGAGGAGTCCAGGAACCACGTGGTCTTCCAGCCCATCTCCGGGGAAGACGTGTGGGATG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345252 206 - 7796314 AGCACCTGCCTCGGGAAACCCCATTCAACACTGGATGGTCACCTCAGAGTTCCAGTACCGCCCTTGGGGCCCCGTCATCGACTTCCTGAACAACCAGCTGCTGGCTGCGGTGGTGGAGGCATTCTTACACCAG---GTTCC------------ACGGAGGAGTGAGGAGTCCAGGAACCACGTGGTCTTCCAGCCCATCTCCAGGGAAGACGTGTGGGATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820137 209 + 74750902 AGCACCAGCCTCAGGAAGCCCCATGCAATACTGGACGGTCATGTCGCAGTTCCAGTACCGCCCTTGGGGCCCTGTCATCCACTTCCTGAACAACCAGCTGCTGGCCGCGGTGGTGGAGGCGTTCTTACACCAGCATGTTCC------------CCGGAGGAGTGAGGAGCCCAGGAACGACGTGGTCTTCCAGCCCCTCTCCAGGGAAGACGTGCGCGATG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17266819 209 - 17725628 GGCACCGGCCTCGGGAAGCCCCGTTCGATACTGGACGGTCACGTCGCAGTTCCAGTACCGCCCTGGGGGCCCTGTCATCCACTTCCTGAACGACCAGCTGCTGGCCGCGGTGGTGGAGGCGTTCTTACACCAGCGCGTCCC------------GCGCAGGAGTGAGGAGCCCAGGAACGACGTGGTCTTCCAGCCCCTCTCCAGGGAAGACGTGAGCGACG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6355764 209 + 6778120 AGCACCGGCCTCAGAAAGCCCCGTTCAATACTGGACGGTCACCTCGCAGTTCCAGTACCGCCCTGGGGGCCCTGTCATCCACTTCCTGAACAACCAGCTGCTGGCCGCCGTGGTGGAGGCGTTCTTACACCGGCAGGTTCC------------ACAGAGGCGTGAGGAGCCCAGGAGCGACGTGGTCTTCCAGCCCCTCTCCAGGGAAGACGTGCGTGATG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 3098 209 + 69927 AGCCCCGGCCTCAGGAAGCCCCGCTCAATACTGGACGGTCACGTCGCGCTTCCAGTACCGCCCTCGGGGCCCTGTCATCCACTTCCTGAACAACCAGCTGCTGGCCGCGGTGGTGGAGGCGTTCTTACACCAGCGCGTCCC------------ACGGAGGAGCGAGGAGCCCAGGAACGACGTGGTCTTCCAGCCCCTCTCCAGGGAAGACGTGCGCGATG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88374736 218 + 114275543 AGCACCAGCCTCAGGAAGCTCCACTCAACACTGGAAGGTCATCTCAGAGTTCCAGTACCGCCCCTGGGGCCCTGTCATTCACTTCTTGAACAACCAGCTGCTGGGCGCAGTGGTGGAGGCATTCTTACACCAG---GTGCCGGCCAGGAGGTCAAAGAGGAGTGAGGGGTCCAGGAACAATGTGGTCTTCCACCCCATCTCCAGAGAAGACGTGCGTGATG i micMur3.chr1 I 81 I 670 s proCoq1.NW_012133858v1 14784947 218 - 22200726 AGCACCAGCCTCGGGAAGCTCCACTCAACACTGGAAGGTCATCTCAAAGTTCCAGTACCGCCCTTGGGGCCCTGTCATCCACTTCCTAAATAACCAGCTCCTGGACGCGGTGGTGGAGGTGTTCTTACCCCAG---GTGCCGACCAGGAGGTGGAAGAGGAGTGAGGGGTCCAGGAACAACGTGGTCTTCCACCCCATCTCCAGGGAAGACGTGCGTGATG i proCoq1.NW_012133858v1 C 0 I 308 s otoGar3.GL873829 196231 218 + 608964 AGCACCAGCCTTGGGAAACTCCATTCATCGTTGGATTGTCATATCAAAGTTCCAGTACCGTCCTAGGGGGCCTGTCATCAACTTCCTGAATAACCAGCTGCTGGATGCAGTAGTGGAGGCTTTCTTACGGCGG---GTTCCCAGGAGAAGGTCGAAGAGGAGCGAGGAGCCCAGAAACAACGTGGTCTTCTACCCTATCTCCAAGGAAAATGTGCACGATG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32778907 218 + 98207768 AGCACAGCCCTCGAGCAAGTCCATTCATCACTGGAAGGTCACCTCCCACTTCAAGTACCGTCCCAGGGGCCCGCTCATCCACTATCTGAACAACCAGCTGATAGGCGCCGTGATGGAGGCCTTCCTCCTGCAG---GCTCGGCAGGAGAGGCAGAAGAGGAGTGGAGAAGCCAGGAAGGACGTCCACTTCTTCCCCATCTCGAGGGCAGATGTCCAGGACC i mm10.chr16 I 1 C 0 s canFam3.chr33 2310409 218 - 31377067 AGCGCCGGCCTCGGGAAGTTTACGTAGACACTGGAGAGTCTTCTCGAAGTTCCAGTACCTTCCTCAGGGTCCCGTCATCGACTTCCTGAACACCAAGCTGCTGGATGCAGTGGTGGAAGCGTTCTTACCCCAG---GCCTCGTGGTGGAGGAAGAACAGAAGTGGGAGGCCCAGGACCGACGTGAACTTCCACTCCATCTCCAGGGAAGACGTGCACAGTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2688867 218 - 6579706 CACCCCAGCCTCAGGAGGTTTCCTTCAACGCTGGAAAGTCATCTCTGAGTTCCAGTACCGCCCTTCGGGCCCTGTCATCGACTTCCTGAACAACAGGCTGCTGAGCGCTATGGTGGAGGCATTCTTACCCCCG---GGCCCCCAGGGGACTTGGAGCAGGAGCCAGGGGCCCAGGAACAACGTGCTCTTCCACCCCATCTCGATGGGAGACGTGCGCAGTG i dasNov3.JH569502 C 0 C 0 a score=1679111.000000 s hg38.chr3_KI270934v1_alt 43838 188 + 163458 TGACAGCCCGTGAGTCC--GTCCATTCCGGGGACACTAT-GGGGGTCACT------------GCGGGGGGC------------------------------GGGCAAACAGAG-------------GTGCTTCA-----GCCCACA---CA------------------------------------------------AA----------------------------------------------CAAGCTAATTG---AGTTTTTC-TGTTTGTTTGGTTTTGAGCGAAAACG-TGAACATTTTGTCCAGCTGC--TTTTTAGATTCGAGAGCAGGAGCAGCCAGCA-CTGCT s panTro5.chr3 2510484 188 - 202621043 TGTCAGCCCGTGAGTCC--GTCCATTCCGGGGACACTAT-GGGGGTCACT------------GCGGGGGGC------------------------------GGGTAAACAGAG-------------GTGCTTCA-----GCCCACA---CA------------------------------------------------AA----------------------------------------------CAAGCTAATTG---AGTTTTTC-TGTTTGTTTGGTTTTGAGCGAAAACG-TGAACATTTTGTCCAGCTGC--TTTTTAGATTCAAGAGCAGGAGCAGCCAGCG-CTGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104973 188 - 190779 TGTCAGCCCGTGAGTCC--GTCCATTCTGGGGACACTAT-GGGGGTCACT------------GCGGGTGGC------------------------------GGGTAAACAGAG-------------GTGCTTCA-----GCCCACA---CA------------------------------------------------AA----------------------------------------------CAAGCTAATTG---AGTTTTTC-TGTTTGTTTGGTTTTGAGCGAAAACG-TGAACATTTTGTCCAGCTGC--TTTTTAGATTCAAGAGCAGGAGCAGCCAGCG-CTGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56911 188 - 106623 TGTCAGCCTGTGAGTCC--GTCCATTCCGGGGACACTAT-GGGGGTCACT------------GCGGGTGGC------------------------------GGGTAAACAGAG-------------GTGCTTCA-----GCCCACA---CA------------------------------------------------AA----------------------------------------------CAAGTTAATTG---AGTTTTTC-TGTTTGTTTGGTTTTGAGCGAAAACG-TGAACATTTTGTCCAGCTGC--TTTTTAGATTCAAGAGCAGGAGCAGCCAGCA-CTGCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2831804 184 - 123690457 TGTCAGCCCGTGAGTCC--GTCCATTCCGGGGACAGTAT-GGGGGTCACT------------GCGGGGGGC------------------------------GGGTAAACAGAG-------------GTGCTTCA-----GCCCACA---CA------------------------------------------------AA----------------------------------------------CAAGCTAACTG---AGTTTTTC-----TGTTTGGTTTTGAGCGAAAACG-TGAACATTTTATCCAGCTGC--TTTTTAGATTCAGGAGCAGGAGCAGCCAGCG-CTGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2328938 188 - 204787373 TGACAGCCCGTGAGTCC--ATCCATTCCAGGGACAATGT-GGGGGTCACT------------GCAGGGGGC------------------------------GGGTAAACGGAG-------------GTGCTTCC-----GCCCACA---CA------------------------------------------------AA----------------------------------------------CAAGTTAGTTG---AGTTTTTC-TGTTTGCTTGGTTTTGAGAGAAAACG-TGAACATTTTATCCAGCTTC--CTTTTAGATTCAAGAGCAGGAGCAGCCAGCA-CTGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192394685 188 - 192460366 TGACAGCCCGTGAGTCC--ATCCATTCCAGGGACAATGT-GGGGGTCACT------------GCAGGGGGC------------------------------GGGTAAACGGAG-------------GTGCTTCC-----GCCCACA---CA------------------------------------------------AA----------------------------------------------CAAGTTAGTTG---AGTTTTTC-TGTTTGCTTGGTTTTGAGAGAAAACG-TGAACATTTTATCCAGCTTC--CTTTTAGATTCAAGAGCAGGAGCAGCCAGCA-CTGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134062 188 - 19675229 TGACAGCCCGTGAGTCC--ATCCATTCCAGGGACAATGT-GGGGGTCACT------------GCAGGGGGC------------------------------GGGTAAACGGAG-------------GTGCTTCC-----GCCCACA---CA------------------------------------------------AA----------------------------------------------CAAGTTAGTTG---AGTTTTTC-TGTTTGCTTGGTTTTGAGAGAAAACG-TGAACATTTTATCCAGCTTC--CTTTTAGATTCAAGAGCAGGAGCAGCCAGCA-CTGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367342 188 - 16847902 TGAGAGCCTGTGAGTCC--ATCCATTCCGGGGACAGTGT-GGGGGTCACT------------GCAGGGGGC------------------------------GGGTAAACGGAG-------------GTGCTTCC-----GCCCACA---CA------------------------------------------------AA----------------------------------------------CAAGTTAGTTG---AGTTCTTC-TGTTTGCTTGGTTTTGAGAGGAAACG-TGAACATTTTATCCAGCTTC--CTTTTAGATTCAAGAGCAGGAGCAGCCAGCA-CCGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340354 185 + 91754291 TGACAGCCCGTGAGTCC--ATCCATTCCGGGGACAGTGT-GGGGGTCACT------------GCAGGGGGT------------------------------GGGTAAACGGAG-------------GTGCTTCC-----GCCCACA---CA------------------------------------------------AA----------------------------------------------CAAGTTAGTTG---AGTTTTTC-TGTTTGCTTGGTTTTGAGAGAAAACG-TGAACATTTTATCCAGCTTC--CGTTTAGATTCAAGAGCAGGAGCACCCAGCA----CT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1405725 188 + 1977891 TGAGAGCCCGTGAGTCC--ATCCATTCCGGGGACAGTGT-GGGGGTCACT------------GCAGGGGGC------------------------------GGGTAAACGGAG-------------GTGCTTCC-----GCCCACA---CA------------------------------------------------AA----------------------------------------------CAAGTTAGTTG---AGTTTTTC-TGTTTGCTTGGTTTTGAGAGAAAACG-TGAACATTTTATCCAGCTTC--CTTTTAGATTCCAGAGCAGGAGCAGCCAGCA-GCGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345458 189 - 7796314 TGACAGCCCGTGAGTCC--ATCCATTCCGGGGACAGTGTGGGGGGTCACT------------GCAGGGGGT------------------------------GGGTAAACAGAG-------------GTCCTTCC-----GCCCACA---CA------------------------------------------------AA----------------------------------------------CAAGTTAATTG---AGTTTTTC-TGTTTGCTTGGTTTTGAGAGAAAACG-TGAACATTTTATCCAGCTTC--CTTTTAGATTCAAGAGCAGGAGCAGCCAGCA-CCGCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820346 181 + 74750902 TGGCGGCCCGTGAGTCA--GTCCATCCCGGGGACAGTGT--GGGGTGACT-----------GGGGGGGGGC------------------------------GGGTAAACCGAG------------GGTGCTTCA-----GCCCACA---CA------------------------------------------------TG----------------------------------------------CAAGTTAATTT---AGTTTTTC---TTTGTTTGATTCTGAGAGAAAACG-TGAACATTTTATCCATCCGC--TTTTTAGATTCAAGAGCAGGA------AGTG-CTGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17267028 183 - 17725628 TGACCGCCCGTGAGTCA--GTCCA-ACTGGGGACAGTGT--GGGACAGC-------------GTGGGGGGC------------------------------GGG-GAACCGAG------------CGTGCCTCA-----GCCCACG---CA------------------------------------------------TA----------------------------------------------CACGTCAGTTT---AGGTTTTG---TTTGTTTGGTTTTGAGAGAAAACG-CGAACATTTTATCCAGTTGC--TTTTTAGATTCAAGAGCAGCAGCGCCCAGCG-CTGCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6355973 183 + 6778120 TGACGGCCGGTGAGTCG--GTCCA-TCCGGGGACGGTGT--GGGACAACT------------GCGGTGGGC------------------------------GGGTGAACCCAG------------GGTGCTTCA-----GCCCCCA---CA------------------------------------------------------------------------------------------------CACGTTAATTT---AGTTTTTC---TTTGTTTGGCTTTGAGAGAAAACG-TAAACATTTTATCCAGCTGC--TTTTTGGATTCAGGAGCAGGAGCACCCAGTG-CTGCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 3307 186 + 69927 TGACGGCCCGTGAGTCA--GTCCATCCCGGGGACAGTGT--GGGATAACT------------TCGGGGGGC------------------------------AGGTAAACCGAG------------GCTGCTTCA-----GCCCACA---CA------------------------------------------------TA----------------------------------------------CACGTTAATTT---AGTTTTAC---TTTGTTTGGTTTTGAGAGAAAACG-TGAACGTTTTATCCAGCCGC--GTTTTAGATTCGAGAGCAGGAGCTCCCGGTG-CTGCT i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 196449 251 + 608964 TGACAGCTCGTGAGTTA--CTC--TCTCAGGGAAAGTAC-AAGGATAATT-------GGGAGGCGGGTGGC------------------------------AGGTAGATAGAGGGAACTTGTCAAGGATCTTGA-----GGCCACA---CACACTTGTAGTAGACAAAGCATTCTATGGAGGTCCACAGACAAGGAAGAAG----------------------------------------------CACATTAATTT---CATTTTCTTTGTTTTGTAAATGTTAAGAGAAAATG-TAAATATTTTACCCATCAGC--CTTTTCA--CCAAGAGCAGAAGCCCAAAATG-CTGCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32779125 234 + 98207768 AGATGGCTCGTGAGTCA----CTATCTTGGAGACAATGG-AGGGATTTGTTAGAGGAGAAAAGCAGAGGGCCATGACAGATCTGCAGGCCATGTCAACCCTTGGTAGAAAGTA-------------ATGTGTGCAGCAGGTCCACAGCTGA------------------------------------------------AG----------------------------------------------CAGGTTAAGTT---AGCTTGGA-TGTCTGTAAATCTTTGAATGAA---T-TTAAAACTTCCCACAACAGCTACTTTTAGACTC-AGAACAGGGACACAAGATG-TAGCT i mm10.chr16 C 0 I 387 s canFam3.chr33 2310627 158 - 31377067 TGCTGGCTCGTGAGTCA--CTC--TCCTGGCCATAGTCA-CAGAGACAGC------------CAAGGGGGC------------------------------AGGTGAACAGGG-------------G------------GACTAGA---TT-----------------------------------------------------------------------------------------------------------------------TTTTTTATCATTTTTGAGGGAAATCGTTAAACATTTCACCCACCAGC--TTTCTAGACTCAAGAGCAG-AGCACCAAACA-TTGCT i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2689085 229 - 6579706 AGCAGGCTCGTGAGTACAGAGTCAGCCAAGGGATGGGGT-GG--------------------ATGGAGGGG------------------------------AGCTTCCCAGAG----------------CTTCA-----GCCCACA---CA------------------------------------------------AACCCACGGCAGAAAAATATTCCATCGAGGTCCAAAGTAAGTAAGATGCAAGttaatttttaaattatta-ttacttgtaattttttaaagaaattt-taaatattttaCCCACCAGC--TTTCTAGGTTTAGGAGCAGGAGCCCAAAAAGGCTGCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14785165 308 - 22200726 I e micMur3.chr1 88374954 670 + 114275543 I a score=335202.000000 s hg38.chr3_KI270934v1_alt 44026 38 + 163458 GAGGCAGTCA---CACGTATACAG-CTTCACGGAGCAAGCAC s panTro5.chr3 2510672 38 - 202621043 GAGGCAGTCA---CACGTATACAG-CTTCACGGAGCAAGCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105161 38 - 190779 GAGGCAGTCA---CACGTATACAG-CTTCATGGAGCAAGCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57099 38 - 106623 GAGGCAGTCA---CACGTATACAG-CTTCACGGAGCAAGCAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2831988 38 - 123690457 AAGGCAGTCA---CATGCAGACAG-CTTCACAGAGCAAGTAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329126 38 - 204787373 AAGGCAGTCC---CATGTATGCAG-CTTCACAGAGCAAGTAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192394873 38 - 192460366 AAGGCAGTCC---CATGTATGCAG-CTTCACAGAGCAAGTAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134250 38 - 19675229 AAGGCAGTCC---CATGTATGCAG-CTTCACAGAGCAAGTAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367530 38 - 16847902 AAGGCAGTCC---CATGTATGCAG-CTTCACAGAGCAAGTAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340539 38 + 91754291 AAGACAGTCA---CATGTATGCAG-CTTCACAGAGCAAGTAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1405913 38 + 1977891 AAGGCAGTCC---CACGTATGCAG-CTTCACAGAGCAAGTAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345647 38 - 7796314 AAGGCAGTCA---CATGTATACAG-CTTCACAGAGCAAGTAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820527 38 + 74750902 AAGGCAGCCA---CGTGCCTGCGG-TTTCACAGAGCGAGTGC i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 17267211 39 - 17725628 GAGGCAGCCA---TGTGCATACGGCTCCCGCGGAGCGAGCAC i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 6356156 38 + 6778120 AAGGCAGCCA---CATGCGTCCGG-CTTCACGGAGCGAGCGC i cebCap1.NW_016107444v1 C 0 I 1 s aotNan1.NW_018503669v1 3493 38 + 69927 AAGGCAGCCA---GATGCATGCGG-CTTCCCAGAGCCCGTCC i aotNan1.NW_018503669v1 C 0 I 14 s otoGar3.GL873829 196700 30 + 608964 CAGGCATCCA---CA--TACGTAG-TTTCGCAGAGC------ i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2310786 38 - 31377067 GGTGAGTCCC---CAGGGATATGG-TTTCACAGACCAATTAC i canFam3.chr33 I 1 I 1 s dasNov3.JH569502 2689314 37 - 6579706 ----CTCTCAATCCACGTACGTAG-TTTCACCCGGCAATCCC i dasNov3.JH569502 C 0 I 1 e proCoq1.NW_012133858v1 14785165 308 - 22200726 I e mm10.chr16 32779359 387 + 98207768 I e micMur3.chr1 88374954 670 + 114275543 I a score=107391.000000 s hg38.chr3_KI270934v1_alt 44064 14 + 163458 CCAGCCAGGGCCTT s panTro5.chr3 2510710 14 - 202621043 CCAGCCAGGGCCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105199 14 - 190779 CCAGCCAGGGCCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57137 14 - 106623 CCAGCCAGGGCCTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832026 14 - 123690457 CCAGCCAGGGCCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329164 14 - 204787373 TCAGCCAGGGCCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192394911 14 - 192460366 TCAGCCAGGGCCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134288 14 - 19675229 TCAGCCAGGGCCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367568 10 - 16847902 ----CCAGGGCCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340577 14 + 91754291 CCAGCCAGGGCCTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1405951 14 + 1977891 CCAGCCAGGACCTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345685 14 - 7796314 CCAGCCAGGGCCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820566 13 + 74750902 CCGG-CCCAGCCTT i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17267251 14 - 17725628 CCAGCCCCAGCCCT i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 6356195 14 + 6778120 CCAGCCCCAGCCTT i cebCap1.NW_016107444v1 I 1 C 0 s canFam3.chr33 2310825 14 - 31377067 CTAATTGCCACCTT i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2689352 14 - 6579706 CCAACAGAGGTCTT i dasNov3.JH569502 I 1 C 0 e proCoq1.NW_012133858v1 14785165 308 - 22200726 I e mm10.chr16 32779359 387 + 98207768 I e aotNan1.NW_018503669v1 3531 14 + 69927 I e micMur3.chr1 88374954 670 + 114275543 I e otoGar3.GL873829 196730 0 + 608964 C a score=394935.000000 s hg38.chr3_KI270934v1_alt 44078 46 + 163458 -GCTGACTGTGGCTGCTAATAAAACAGCAGCAATTTAGTTTC-----ATAAA s panTro5.chr3 2510724 46 - 202621043 -GCTGACTGTGGCTGCTAATAAAACAGCAGCAATTTAGTTTC-----ATAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105213 46 - 190779 -GCTGACTGTGGCTGCTAATAAAACAGCAGCAATTTATTTTC-----ATAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57151 46 - 106623 -GCTGACTGTGGCTGCTAATAAAACAGCAGCAATTTAGTTTC-----ATAAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832040 46 - 123690457 -GCTGACTGTGGCTGCTAATCAAACAGCAGCAATTCATTTTC-----ATAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329178 46 - 204787373 -GCTGACTGTGGCCGCTAATAAAACAGCAGCAATTTATTTTC-----ATAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192394925 46 - 192460366 -GCTGACTGTGGCCGCTAATAAAACAGCAGCAATTTATTTTC-----ATAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134302 46 - 19675229 -GCTGACTGTGGCCGCTAATAAAACAGCAGCAATTTATTTTC-----ATAAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367578 46 - 16847902 -GCTGACTGTGGCCGCTAATAAAACAGCAGCAATTTATTTTC-----ATAAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340591 46 + 91754291 -GCTGACCGTGGCTGCTAATAAAACAGCAGCAATTTATTTTC-----ATAAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1405965 46 + 1977891 -GCTGACTGTGGCCGCTAATAAAACAGCAGCAATTTATTTTC-----ATAAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345699 46 - 7796314 -GCTGACTGTGGCTGCTAGTAAAGCAGCAGCAATTTATTTTC-----ATAAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820579 46 + 74750902 -GCTGACTGCCGCTGCTCAGGAAACAGCAGCAATTTGTTTTC-----ATAAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17267265 46 - 17725628 -GCTGATGGCGGCTGCTCAGGAAACAGCAGCAATTCATTTTC-----ATAAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6356209 42 + 6778120 -GCGGACCGCGGCTGCCCACGGAACGGCAGCAA----TTTTC-----ATAAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 3545 46 + 69927 -GCTGACTGCGGCTGCTCACGAAACAGCAGCAATTTATTTTC-----ACAAA i aotNan1.NW_018503669v1 I 14 C 0 s otoGar3.GL873829 196730 17 + 608964 ------------------------------CATTTCTCCCTA-----ATATT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2310839 40 - 31377067 -CCTGACCATCACTGCTGA-----------CGGTTTTCTTTCTTTTGATGAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2689366 37 - 6579706 CCTAAACTATTGCCGCTAA----------GGACTTTCTTTGA-----ATGAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14785165 308 - 22200726 I e mm10.chr16 32779359 387 + 98207768 I e micMur3.chr1 88374954 670 + 114275543 I a score=29944.000000 s hg38.chr3_KI270934v1_alt 44124 2 + 163458 AT s panTro5.chr3 2510770 2 - 202621043 AT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105259 2 - 190779 AT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57197 2 - 106623 AT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832086 2 - 123690457 AT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329224 2 - 204787373 AT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192394971 2 - 192460366 AT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134348 2 - 19675229 AT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367624 2 - 16847902 AT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340637 2 + 91754291 AT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1406011 2 + 1977891 AT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345745 2 - 7796314 AT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820625 2 + 74750902 AT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17267311 2 - 17725628 AT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6356251 2 + 6778120 AT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 3591 2 + 69927 AT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88375624 2 + 114275543 AT i micMur3.chr1 I 670 C 0 s otoGar3.GL873829 196747 2 + 608964 GC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2310879 2 - 31377067 AT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2689403 2 - 6579706 AT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14785165 308 - 22200726 I e mm10.chr16 32779359 387 + 98207768 I a score=760750.000000 s hg38.chr3_KI270934v1_alt 44126 50 + 163458 TGCTAATAGTTTTCTTAAAATGCCATTGCACT---TAAGCATACACAGGGACA s panTro5.chr3 2510772 50 - 202621043 TGCTAATAGTTTTCTTAAAATGCCATTGCACT---TAAGCATACACAGGGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105261 50 - 190779 TGCTAATAGTTTTCTTAAAATGCCATTGCACT---TAAGCATACACAGGGACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57199 50 - 106623 TGCTAATAGTTTTCTTAAAATGCCATTGCACT---TAAGCATACACAGGGACA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832088 50 - 123690457 TGCTAATAGTTTTCTTAAAATGCCATTGCATT---TAAACATACACAGCGACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329226 50 - 204787373 TGCTAATAGTTTTCTTAAGATGCCATTGCACT---TAAACATACACAAGGACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192394973 50 - 192460366 TGCTAATAGTTTTCTTAAGATGCCATTGCACT---TAAACATACACAAGGACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134350 50 - 19675229 TGCTAATAGTTTTCTTAAGATGCCATTGCACT---TAAACATACACAAGGACA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367626 50 - 16847902 TGCTAATAGTTTTCTTAAAATGCCTTTGCACT---AAAACATACACAAGGACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340639 50 + 91754291 TGCTAATAGTTTTCTTAAAATGCCATTGCACT---TAAACATATACAAGGACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1406013 50 + 1977891 TGCTAATAGTTTTCTTAAGATGCCTTTGCACT---AAAACATACACAAGGACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345747 50 - 7796314 TGCTAGTAGTTTTCTTAAAATGCCATTGCACT---TAAACATACACAAGGACA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820627 50 + 74750902 TGCTACTGGTTTTCTGAAAGTGCCATTGCACT---TAAACCTACACAAGGGCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17267313 50 - 17725628 TGCTGCTGGTTTTCTTAAAGTGCCATTGCACT---TAAACAGGCACAAGGGCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6356253 49 + 6778120 TGCTCCT-GTTTTCTTAAAGTGCCATTGCACT---TAAACATACACAAGGGCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 3593 50 + 69927 TGCTACTGGTTTTCTTAAAGTGCCATTGCACT---TAAACATACACAAGGGCA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88375626 50 + 114275543 TGCTAATGGTTTTCTTAAAATATTGTTGCACT---TAAACATATACAAGGACA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14785473 50 - 22200726 TGCTAATGGTTTTCTTAAAATACTGTTGCACT---TAAATATACACAAGGACG i proCoq1.NW_012133858v1 I 308 C 0 s otoGar3.GL873829 196749 50 + 608964 TGCTGATGGTTTTCTTAAAGTATCATTGCACT---TAAACATACACAAGGGCA i otoGar3.GL873829 C 0 I 706 s canFam3.chr33 2310881 53 - 31377067 TGGTAATGATTTTGTTAAAAAACCATTGTGCTTTATAAACATAAACAAGGACA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2689405 53 - 6579706 TGCTAATGGTTTTCTTAAAATGCTATTGCACTTTATAAACCTCACCAAGGGCA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32779359 387 + 98207768 I a score=589317.000000 s hg38.chr3_KI270934v1_alt 44176 49 + 163458 CCCCCATCGTCTCTGCTCTCCAGCGGGAGGATATGAAGCTGGAGACTGG s panTro5.chr3 2510822 49 - 202621043 CCCCCATCGTCTCTGCCCTCCAGCGGGAGGATATGAAGCTGGAGACTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105311 49 - 190779 CCCCCATCGTCTCTGCCCTCCAGCGGGAGGATATGAAGCTGAAGACTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57249 49 - 106623 CCCCCATCGTCTCTGCCCTCCAGCGGGAGGATATGAAGCTGGAGACTGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832138 49 - 123690457 CCCCCATCGTCTCTGCCCTCTAGCGGGAGGATATGAAGCTGGAGACTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329276 49 - 204787373 CCCCCATCATGTCTGTCCTCCAGCTGCAGGCTATTAAGCTGGAGACTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395023 49 - 192460366 CCCCCATCATGTCTGTCCTCCAGCTGCAGGCTATTAAGCTGGAGACTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134400 49 - 19675229 CCCCCATCATGTCTGTCCTCCAGCTGCAGGCTATTAAGCTGGAGACTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367676 49 - 16847902 CCCCCAACGTGTATGTCCTCCAGCTGCAGGATATTAACCTGAAGACTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340689 49 + 91754291 CCCCCATCATGTCTGTCCTCCAGCTGCAGGATATTAAGCTGGAGACTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1406063 42 + 1977891 CCCCCATCATGTCTGTCCTCCAGCTGCAGGCTATTAAG-------CTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345797 49 - 7796314 CCCCCATCGTGTCTGTCCTCCAGCTGCAGGATATTAAGCTGGGGACTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820677 49 + 74750902 TTCCCGTCATCTCTGCCCTCCAGCTGGTGGGTGTGAAGCTGGAGACTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17267363 48 - 17725628 -TCCCATCGTCTCTGCCCTCCAGCTGGAGGACATGAAGCTGGAGACTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6356302 49 + 6778120 TCGCCGTCGTCTCTGCCCCCCAGCTGGAGGACGTGAAGCTAGAGACTGG i cebCap1.NW_016107444v1 C 0 I 18 s aotNan1.NW_018503669v1 3643 49 + 69927 TCCCCATCGTCTCTGCCCTCCAGCTGGAGGGTATGAAGCTGGAGACTGG i aotNan1.NW_018503669v1 C 0 I 15 s micMur3.chr1 88375676 48 + 114275543 -TTCCCTCGTCTTTGCCCTCCAGCTGGAGGATATTAAGCTGAAGGCTGG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14785523 48 - 22200726 -TCCCCTCACCTTTGCCCTTCAGCTGGAGGATTTTAAGCTGGAGGCTGG i proCoq1.NW_012133858v1 C 0 C 0 s canFam3.chr33 2310934 49 - 31377067 TCCCTTTTGCCTTTGCCCTCCAGCTGGAGGAAATTCAGTTGAAGGCTGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2689458 36 - 6579706 -------------TCCCCTCCAGCTGGAGGATATTAAGTTGGAGCCAGG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32779359 387 + 98207768 I e otoGar3.GL873829 196799 706 + 608964 I a score=10920.000000 s hg38.chr3_KI270934v1_alt 44225 1 + 163458 A s panTro5.chr3 2510871 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105360 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57298 1 - 106623 A i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832187 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329325 1 - 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395072 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134449 1 - 19675229 A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367725 1 - 16847902 A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340738 1 + 91754291 A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1406105 1 + 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345846 1 - 7796314 A i colAng1.NW_012118932v1 C 0 C 0 s micMur3.chr1 88375724 1 + 114275543 A i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14785571 1 - 22200726 A i proCoq1.NW_012133858v1 C 0 C 0 s canFam3.chr33 2310983 1 - 31377067 A i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2689494 1 - 6579706 A i dasNov3.JH569502 C 0 M 400 e mm10.chr16 32779359 387 + 98207768 I e aotNan1.NW_018503669v1 3692 15 + 69927 I e saiBol1.JH378146 17267411 0 - 17725628 C e calJac3.chr17 73820726 0 + 74750902 C e cebCap1.NW_016107444v1 6356351 18 + 6778120 I e otoGar3.GL873829 196799 706 + 608964 I a score=150326.000000 s hg38.chr3_KI270934v1_alt 44226 18 + 163458 GACTGG--CCAGGGACAGAG s panTro5.chr3 2510872 18 - 202621043 GACTGG--CTGGGGACAGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105361 18 - 190779 GACTGG--CTGGGGACAGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57299 18 - 106623 GACTGG--CCGGGGACAGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832188 18 - 123690457 GACTGG--CCAGGGACAGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329326 18 - 204787373 GACCGG--CCAGGGACAGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395073 18 - 192460366 GACTGG--CCAGGGACAGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134450 18 - 19675229 GACTGG--CCAGAGACAGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367726 18 - 16847902 GACTGG--CCAGGGACAGAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340739 18 + 91754291 GACTGG--CCAGGGACAGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1406106 18 + 1977891 GACTGG--CCAGGGACAGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345847 18 - 7796314 GACTGG--CCAGGCACAGAG i colAng1.NW_012118932v1 C 0 C 0 s micMur3.chr1 88375725 18 + 114275543 GACTGG--CCAGGGACAGAG i micMur3.chr1 C 0 I 46 s proCoq1.NW_012133858v1 14785572 18 - 22200726 GACTGG--CCAGGGGCAGAG i proCoq1.NW_012133858v1 C 0 I 33 s canFam3.chr33 2310984 20 - 31377067 GACCTGACCTAGGGGCAGAG i canFam3.chr33 C 0 C 0 e mm10.chr16 32779359 387 + 98207768 I e aotNan1.NW_018503669v1 3692 15 + 69927 I e dasNov3.JH569502 2689495 400 - 6579706 M e saiBol1.JH378146 17267411 0 - 17725628 C e calJac3.chr17 73820726 0 + 74750902 C e cebCap1.NW_016107444v1 6356351 18 + 6778120 I e otoGar3.GL873829 196799 706 + 608964 I a score=173238.000000 s hg38.chr3_KI270934v1_alt 44244 32 + 163458 GCAACTACTCCCTGAAATGGTGTCACCCTGTG s panTro5.chr3 2510890 32 - 202621043 GCAACTACTCCCTGAAATGGTGTCACCCTGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105379 32 - 190779 GCAACTACTCCCTGAAATGGTGTCACCCTGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57317 32 - 106623 GCAACTACTCCCTGAAATGATGTCACCCTGTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832206 32 - 123690457 GCAACTACTCCCTGAAATGATGTGACCCTGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329344 32 - 204787373 GCAACTCTTCCCTGAAATGATGTGACCCTGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395091 32 - 192460366 GCAACTCTTCCCTGAAATGATGTGACCCTGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134468 32 - 19675229 GCAACTCTTCCCTGAAATGATGTGACCCTGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367744 32 - 16847902 GCAACTCCTCTCAGAAATGATGGGACCCTGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340757 32 + 91754291 GCAACTCTTCCCTGAAATGATGGGACTCTGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1406124 32 + 1977891 GCAACTCTTCCCTGAAATGATGTGACCCTGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345865 32 - 7796314 GCAACTCTTCCCTGAAATGATGTGACCCTGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820726 15 + 74750902 ---------CCCGGAAATGATCTG-------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17267411 15 - 17725628 ---------CCAGGGAAGGGtgtg-------- i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 2311004 29 - 31377067 GTTTCCCCTCCTTGAA---GGgtgaccctgtg i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14785590 33 - 22200726 I e mm10.chr16 32779359 387 + 98207768 I e aotNan1.NW_018503669v1 3692 15 + 69927 I e micMur3.chr1 88375743 46 + 114275543 I e dasNov3.JH569502 2689495 400 - 6579706 M e cebCap1.NW_016107444v1 6356351 18 + 6778120 I e otoGar3.GL873829 196799 706 + 608964 I a score=9100.000000 s hg38.chr3_KI270934v1_alt 44276 1 + 163458 C s panTro5.chr3 2510922 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105411 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57349 1 - 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832238 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329376 1 - 204787373 C i rheMac8.chr2 C 0 I 146 s macFas5.chr2 192395123 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134500 1 - 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367776 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340789 1 + 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1406156 1 + 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345897 1 - 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820741 1 + 74750902 C i calJac3.chr17 C 0 C 0 s canFam3.chr33 2311033 1 - 31377067 c i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14785590 33 - 22200726 I e mm10.chr16 32779359 387 + 98207768 I e aotNan1.NW_018503669v1 3692 15 + 69927 I e micMur3.chr1 88375743 46 + 114275543 I e dasNov3.JH569502 2689495 400 - 6579706 M e saiBol1.JH378146 17267426 0 - 17725628 C e cebCap1.NW_016107444v1 6356351 18 + 6778120 I e otoGar3.GL873829 196799 706 + 608964 I a score=8281.000000 s hg38.chr3_KI270934v1_alt 44277 1 + 163458 A s panTro5.chr3 2510923 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105412 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57350 1 - 106623 A i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832239 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329523 1 - 204787373 A i rheMac8.chr2 I 146 C 0 s macFas5.chr2 192395124 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134501 1 - 19675229 A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367777 1 - 16847902 A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340790 1 + 91754291 A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1406157 1 + 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345898 1 - 7796314 A i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820742 1 + 74750902 A i calJac3.chr17 C 0 C 0 s canFam3.chr33 2311034 1 - 31377067 a i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14785590 33 - 22200726 I e mm10.chr16 32779359 387 + 98207768 I e aotNan1.NW_018503669v1 3692 15 + 69927 I e micMur3.chr1 88375743 46 + 114275543 I e dasNov3.JH569502 2689495 400 - 6579706 M e saiBol1.JH378146 17267426 0 - 17725628 C e cebCap1.NW_016107444v1 6356351 18 + 6778120 I e otoGar3.GL873829 196799 706 + 608964 I a score=87330.000000 s hg38.chr3_KI270934v1_alt 44278 13 + 163458 AGCACCTTCCCCA s panTro5.chr3 2510924 13 - 202621043 AGCACCTTCCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105413 13 - 190779 AGCACCTTCCCCA i panPan2.chrUn_NW_014024201v1 C 0 I 3599 s gorGor5.CYUI01000576v1 57351 13 - 106623 AGCACCTTCCCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832240 13 - 123690457 AGCCCCTTCCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329524 13 - 204787373 AGCACCTTCCCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395125 13 - 192460366 ACCACCTTCCCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134502 13 - 19675229 ACCACCTTCCCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367778 13 - 16847902 AGCACCTTCCCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340791 13 + 91754291 ACCACCTTCCCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1406158 13 + 1977891 AGCACCTTCCCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345899 13 - 7796314 ACCACCTTCCcca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820743 13 + 74750902 AGCACCTTCCCCA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14785590 33 - 22200726 I e mm10.chr16 32779359 387 + 98207768 I e aotNan1.NW_018503669v1 3692 15 + 69927 I e micMur3.chr1 88375743 46 + 114275543 I e dasNov3.JH569502 2689495 400 - 6579706 M e saiBol1.JH378146 17267426 0 - 17725628 C e cebCap1.NW_016107444v1 6356351 18 + 6778120 I e canFam3.chr33 2311035 0 - 31377067 C e otoGar3.GL873829 196799 706 + 608964 I a score=-1296.000000 s hg38.chr3_KI270934v1_alt 44291 4 + 163458 GG----------------------------------CC s panTro5.chr3 2510937 38 - 202621043 GGCCAGGCCAGGCCTCAACACCCCCCAGCACCTTCCCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 57364 4 - 106623 GG----------------------------------CC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832253 38 - 123690457 GGCCAGACCAGGCCTCAACACCCCCCAGCACCTTCCCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329537 4 - 204787373 GG----------------------------------CC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395138 4 - 192460366 GG----------------------------------CC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134515 4 - 19675229 GG----------------------------------CC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367791 4 - 16847902 GG----------------------------------CC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340804 4 + 91754291 GG----------------------------------CC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1406171 4 + 1977891 GG----------------------------------CC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345912 4 - 7796314 gg----------------------------------cc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820756 4 + 74750902 GG----------------------------------CC i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14785590 33 - 22200726 I e mm10.chr16 32779359 387 + 98207768 I e aotNan1.NW_018503669v1 3692 15 + 69927 I e micMur3.chr1 88375743 46 + 114275543 I e dasNov3.JH569502 2689495 400 - 6579706 M e saiBol1.JH378146 17267426 0 - 17725628 C e cebCap1.NW_016107444v1 6356351 18 + 6778120 I e canFam3.chr33 2311035 0 - 31377067 C e otoGar3.GL873829 196799 706 + 608964 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=95849.000000 s hg38.chr3_KI270934v1_alt 44295 22 + 163458 AGGCC---------------------------------------AGGCCTCAACACCCCCC s panTro5.chr3 2510975 22 - 202621043 AGGCC---------------------------------------AGGCCTCAACACCCCCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 57368 22 - 106623 AGGCC---------------------------------------AGGCCTCAACACCCCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832291 22 - 123690457 AGGCC---------------------------------------AGGCCTCAACACCCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329541 22 - 204787373 AGGCC---------------------------------------AGGCCTCAACACCCCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395142 22 - 192460366 AGGCC---------------------------------------AGGCCTCAACACCCCTC i macFas5.chr2 C 0 I 34 s macNem1.NW_012014355v1 19134519 22 - 19675229 AGGCC---------------------------------------AGGCCTCAACACCCCCC i macNem1.NW_012014355v1 C 0 I 175 s cerAty1.NW_012004056v1 16367795 61 - 16847902 AGGCCAGGCCAGGCCTCAATACTCCTCAGCACCTTCCCCAGGCGAGGCCTCAACACCCCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340808 22 + 91754291 AGGCC---------------------------------------AGGCCTCAACACTCCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1406175 22 + 1977891 AGGCC---------------------------------------AGGCCTCAACACCCCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345916 22 - 7796314 aggcc---------------------------------------aggcctcaacaccccca i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14785590 33 - 22200726 I e mm10.chr16 32779359 387 + 98207768 I e aotNan1.NW_018503669v1 3692 15 + 69927 I e micMur3.chr1 88375743 46 + 114275543 I e dasNov3.JH569502 2689495 400 - 6579706 M e saiBol1.JH378146 17267426 0 - 17725628 C e calJac3.chr17 73820760 0 + 74750902 C e cebCap1.NW_016107444v1 6356351 18 + 6778120 I e canFam3.chr33 2311035 0 - 31377067 C e otoGar3.GL873829 196799 706 + 608964 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=143725.000000 s hg38.chr3_KI270934v1_alt 44317 27 + 163458 AGCACCTTCCCCAGGCCAGGCCAGGCC s panTro5.chr3 2510997 27 - 202621043 AGCACCTTCCCCAGGCCAGGCCAGGCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 57390 27 - 106623 AGCACCTTCCCCAGGCCAGGCCAGGCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832313 27 - 123690457 AGCACCTTCCCCAGGCCAGGCCAGGCC i nomLeu3.chr11 C 0 I 292 s rheMac8.chr2 2329563 27 - 204787373 AGCACCTTCCCCAGGCCAGGCCAGGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395198 27 - 192460366 AGCACCTTCCCCAGGCCAGGCCAGGCC i macFas5.chr2 I 34 C 0 s macNem1.NW_012014355v1 19134716 27 - 19675229 AGCACCTTCCCCAAGCCAGGCCAGGCC i macNem1.NW_012014355v1 I 175 C 0 s cerAty1.NW_012004056v1 16367856 27 - 16847902 AGCACCTTCCCCAGGCCAGGCCAGGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340830 27 + 91754291 AGCACCTTCCCCAGGCCAGGCCAGGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1406197 27 + 1977891 AGCACCTTCCCCAGGCCAGGCCAGGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345938 27 - 7796314 agcaccttccccaggccaggccaggcc i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14785590 33 - 22200726 I e mm10.chr16 32779359 387 + 98207768 I e aotNan1.NW_018503669v1 3692 15 + 69927 I e micMur3.chr1 88375743 46 + 114275543 I e dasNov3.JH569502 2689495 400 - 6579706 M e saiBol1.JH378146 17267426 0 - 17725628 C e calJac3.chr17 73820760 0 + 74750902 C e cebCap1.NW_016107444v1 6356351 18 + 6778120 I e canFam3.chr33 2311035 0 - 31377067 C e otoGar3.GL873829 196799 706 + 608964 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=91878.000000 s hg38.chr3_KI270934v1_alt 44344 20 + 163458 TCAACACCCCCCAGCACCTT s panTro5.chr3 2511024 20 - 202621043 TCAACACCCCCCAGCACCTT i panTro5.chr3 C 0 I 5546 s gorGor5.CYUI01000576v1 57417 19 - 106623 TCAACA-CCCCCAGCACCTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832632 20 - 123690457 TCAACACCCCCCAGCACCTT i nomLeu3.chr11 I 292 C 0 s rheMac8.chr2 2329590 20 - 204787373 TCAACACCCCCCAGCACCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395225 20 - 192460366 TCAACACCCCCCAGCACCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134743 20 - 19675229 TCAACACCCCCCAGCACCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367883 20 - 16847902 TCAGCACCCCCGAGCACCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340857 20 + 91754291 TCAACACCCCCAAGCACCTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1406224 20 + 1977891 TCAACACCCCCCAGCACCTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345965 20 - 7796314 TCAACACCCCTCACCACCTT i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14785590 33 - 22200726 I e mm10.chr16 32779359 387 + 98207768 I e aotNan1.NW_018503669v1 3692 15 + 69927 I e micMur3.chr1 88375743 46 + 114275543 I e dasNov3.JH569502 2689495 400 - 6579706 M e saiBol1.JH378146 17267426 0 - 17725628 C e calJac3.chr17 73820760 0 + 74750902 C e cebCap1.NW_016107444v1 6356351 18 + 6778120 I e canFam3.chr33 2311035 0 - 31377067 C e otoGar3.GL873829 196799 706 + 608964 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=109609.000000 s hg38.chr3_KI270934v1_alt 44364 37 + 163458 CCCCAGGCCAGGCCTCAACACCCCCCA-GCACCT-----------------------------------------------------------------CCCC s panTro5.chr3 2516590 38 - 202621043 CCCCAGGCCAGGCCTCAACACTCCCCAAGCACCT-----------------------------------------------------------------TCCC i panTro5.chr3 I 5546 C 0 s gorGor5.CYUI01000576v1 57436 37 - 106623 CCCCAGGCCAAGCCTCAACACCCTCAA-GCACCT-----------------------------------------------------------------TCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832652 37 - 123690457 CCCCAGGCCAGGCCTCAACACCCCCCA-GCACCT-----------------------------------------------------------------TCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329610 36 - 204787373 CCCCAGGCCAGGCCTCAACGCTCCTCA-GCACCT-----------------------------------------------------------------TCC- i rheMac8.chr2 C 0 I 2 s macFas5.chr2 192395245 102 - 192460366 CCCCAGGCCAGGCCTCAACACCCCTAA-GCACCTTCCCCAGGCCAGGCCAGGCCTCAACACCCCCCAGCACCTTCCCCAGGCCAGGCCAGGCCTCAACACCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134763 37 - 19675229 CCCCAGGCCAGGCCTCAACACCCCCAA-GCACCT-----------------------------------------------------------------TCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367903 37 - 16847902 CCCCAGGCCAGGCCTCAGCACCCCCGA-GCACCT-----------------------------------------------------------------TCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340877 14 + 91754291 CCCCAGGCCAGGCC----------------------------------------------------------------------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1406244 37 + 1977891 CCCCAGGCCAGGCCTCAACACCCCCCA-GCACCT-----------------------------------------------------------------TCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7345985 37 - 7796314 CCCCAGGCCAGGCCTCAACACCCCCAA-GCACCT-----------------------------------------------------------------TCCc i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14785590 33 - 22200726 I e mm10.chr16 32779359 387 + 98207768 I e aotNan1.NW_018503669v1 3692 15 + 69927 I e micMur3.chr1 88375743 46 + 114275543 I e dasNov3.JH569502 2689495 400 - 6579706 M e saiBol1.JH378146 17267426 0 - 17725628 C e calJac3.chr17 73820760 0 + 74750902 C e cebCap1.NW_016107444v1 6356351 18 + 6778120 I e canFam3.chr33 2311035 0 - 31377067 C e otoGar3.GL873829 196799 706 + 608964 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=-3744.000000 s hg38.chr3_KI270934v1_alt 44401 1 + 163458 -G s panTro5.chr3 2516628 1 - 202621043 -C i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 57473 1 - 106623 -C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832689 1 - 123690457 -C i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192395347 1 - 192460366 -C i macFas5.chr2 C 0 I 13 s macNem1.NW_012014355v1 19134800 1 - 19675229 -C i macNem1.NW_012014355v1 C 0 I 5 s cerAty1.NW_012004056v1 16367940 1 - 16847902 -C i cerAty1.NW_012004056v1 C 0 I 5 s manLeu1.NW_012102020v1 1406281 1 + 1977891 -A i manLeu1.NW_012102020v1 C 0 I 399 s colAng1.NW_012118932v1 7346022 1 - 7796314 -c i colAng1.NW_012118932v1 C 0 I 5 s canFam3.chr33 2311035 1 - 31377067 g- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14785590 33 - 22200726 I e mm10.chr16 32779359 387 + 98207768 I e aotNan1.NW_018503669v1 3692 15 + 69927 I e micMur3.chr1 88375743 46 + 114275543 I e dasNov3.JH569502 2689495 400 - 6579706 M e saiBol1.JH378146 17267426 0 - 17725628 C e calJac3.chr17 73820760 0 + 74750902 C e cebCap1.NW_016107444v1 6356351 18 + 6778120 I e otoGar3.GL873829 196799 706 + 608964 I e chlSab2.chr15 91340891 0 + 91754291 C e rheMac8.chr2 2329646 2 - 204787373 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=60375.000000 s hg38.chr3_KI270934v1_alt 44402 14 + 163458 AGGCCAGGCCTCAA s panTro5.chr3 2516629 14 - 202621043 AGGCCAGGCCTCAA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 57474 14 - 106623 AGGCCAGGCCTCAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832690 14 - 123690457 AGGCCAGGCCTCAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329648 14 - 204787373 AGGCGAGGCCTCAA i rheMac8.chr2 I 2 I 151 s macFas5.chr2 192395361 14 - 192460366 AGGCCAGGCCTCAA i macFas5.chr2 I 13 C 0 s macNem1.NW_012014355v1 19134806 14 - 19675229 AGGCCAGGCCTCAA i macNem1.NW_012014355v1 I 5 C 0 s cerAty1.NW_012004056v1 16367946 14 - 16847902 AGGCCAGGCCTCAG i cerAty1.NW_012004056v1 I 5 C 0 s chlSab2.chr15 91340891 9 + 91754291 -----AGGCCTCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1406681 14 + 1977891 AGGCCAGGCCTCAA i manLeu1.NW_012102020v1 I 399 C 0 s colAng1.NW_012118932v1 7346028 14 - 7796314 aggccaggcctcag i colAng1.NW_012118932v1 I 5 C 0 s canFam3.chr33 2311036 6 - 31377067 aagcca-------- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14785590 33 - 22200726 I e mm10.chr16 32779359 387 + 98207768 I e aotNan1.NW_018503669v1 3692 15 + 69927 I e micMur3.chr1 88375743 46 + 114275543 I e dasNov3.JH569502 2689495 400 - 6579706 M e saiBol1.JH378146 17267426 0 - 17725628 C e calJac3.chr17 73820760 0 + 74750902 C e cebCap1.NW_016107444v1 6356351 18 + 6778120 I e otoGar3.GL873829 196799 706 + 608964 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=14785.000000 s hg38.chr3_KI270934v1_alt 44416 3 + 163458 CAC s panTro5.chr3 2516643 3 - 202621043 CAC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 57488 3 - 106623 CAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832704 3 - 123690457 CAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329813 3 - 204787373 CAC i rheMac8.chr2 I 151 C 0 s macFas5.chr2 192395375 3 - 192460366 CGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134820 3 - 19675229 CAC i macNem1.NW_012014355v1 C 0 I 78 s cerAty1.NW_012004056v1 16367960 3 - 16847902 CAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340900 3 + 91754291 CAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1406695 3 + 1977891 CAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346042 3 - 7796314 cac i colAng1.NW_012118932v1 C 0 I 12 e proCoq1.NW_012133858v1 14785590 33 - 22200726 I e mm10.chr16 32779359 387 + 98207768 I e aotNan1.NW_018503669v1 3692 15 + 69927 I e micMur3.chr1 88375743 46 + 114275543 I e dasNov3.JH569502 2689495 400 - 6579706 M e saiBol1.JH378146 17267426 0 - 17725628 C e calJac3.chr17 73820760 0 + 74750902 C e cebCap1.NW_016107444v1 6356351 18 + 6778120 I e canFam3.chr33 2311042 0 - 31377067 C e otoGar3.GL873829 196799 706 + 608964 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=398.000000 s hg38.chr3_KI270934v1_alt 44419 1 + 163458 T s nomLeu3.chr11 2832707 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329816 1 - 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395378 1 - 192460366 T i macFas5.chr2 C 0 I 184 s manLeu1.NW_012102020v1 1406698 1 + 1977891 T i manLeu1.NW_012102020v1 C 0 I 354 s colAng1.NW_012118932v1 7346057 1 - 7796314 t i colAng1.NW_012118932v1 I 12 I 26 e proCoq1.NW_012133858v1 14785590 33 - 22200726 I e mm10.chr16 32779359 387 + 98207768 I e aotNan1.NW_018503669v1 3692 15 + 69927 I e micMur3.chr1 88375743 46 + 114275543 I e dasNov3.JH569502 2689495 400 - 6579706 M e macNem1.NW_012014355v1 19134823 78 - 19675229 I e saiBol1.JH378146 17267426 0 - 17725628 C e calJac3.chr17 73820760 0 + 74750902 C e cebCap1.NW_016107444v1 6356351 18 + 6778120 I e canFam3.chr33 2311042 0 - 31377067 C e otoGar3.GL873829 196799 706 + 608964 I e chlSab2.chr15 91340903 0 + 91754291 C e cerAty1.NW_012004056v1 16367963 0 - 16847902 C e gorGor5.CYUI01000576v1 57491 0 - 106623 C e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I e panTro5.chr3 2516646 0 - 202621043 C a score=16500.000000 s hg38.chr3_KI270934v1_alt 44420 3 + 163458 CCC s panTro5.chr3 2516646 3 - 202621043 CCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 57491 3 - 106623 CCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832708 3 - 123690457 CCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329817 3 - 204787373 CCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395563 3 - 192460366 CCC i macFas5.chr2 I 184 C 0 s macNem1.NW_012014355v1 19134901 3 - 19675229 CCC i macNem1.NW_012014355v1 I 78 C 0 s cerAty1.NW_012004056v1 16367963 3 - 16847902 CCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340903 3 + 91754291 CCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407053 3 + 1977891 CCC i manLeu1.NW_012102020v1 I 354 C 0 s colAng1.NW_012118932v1 7346084 3 - 7796314 CCC i colAng1.NW_012118932v1 I 26 C 0 e proCoq1.NW_012133858v1 14785590 33 - 22200726 I e mm10.chr16 32779359 387 + 98207768 I e aotNan1.NW_018503669v1 3692 15 + 69927 I e micMur3.chr1 88375743 46 + 114275543 I e dasNov3.JH569502 2689495 400 - 6579706 M e saiBol1.JH378146 17267426 0 - 17725628 C e calJac3.chr17 73820760 0 + 74750902 C e cebCap1.NW_016107444v1 6356351 18 + 6778120 I e canFam3.chr33 2311042 0 - 31377067 C e otoGar3.GL873829 196799 706 + 608964 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=19873.000000 s hg38.chr3_KI270934v1_alt 44423 3 + 163458 caa s panTro5.chr3 2516649 3 - 202621043 caa i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 57494 3 - 106623 CAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832711 3 - 123690457 CAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329820 3 - 204787373 CGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395566 3 - 192460366 CGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134904 3 - 19675229 CGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367966 3 - 16847902 CGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340906 3 + 91754291 CGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407056 3 + 1977891 CGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346087 3 - 7796314 CGA i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17267426 3 - 17725628 caa i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 3707 3 + 69927 caa i aotNan1.NW_018503669v1 I 15 C 0 s proCoq1.NW_012133858v1 14785623 3 - 22200726 caa i proCoq1.NW_012133858v1 I 33 C 0 e mm10.chr16 32779359 387 + 98207768 I e micMur3.chr1 88375743 46 + 114275543 I e dasNov3.JH569502 2689495 400 - 6579706 M e calJac3.chr17 73820760 0 + 74750902 C e cebCap1.NW_016107444v1 6356351 18 + 6778120 I e canFam3.chr33 2311042 0 - 31377067 C e otoGar3.GL873829 196799 706 + 608964 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=19166.000000 s hg38.chr3_KI270934v1_alt 44426 2 + 163458 gc s panTro5.chr3 2516652 2 - 202621043 gc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 57497 2 - 106623 GC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832714 2 - 123690457 GC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329823 2 - 204787373 GC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395569 2 - 192460366 GC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134907 2 - 19675229 AC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367969 2 - 16847902 GC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340909 2 + 91754291 GC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407059 2 + 1977891 GC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346090 2 - 7796314 GC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17267429 2 - 17725628 gc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6356369 2 + 6778120 GC i cebCap1.NW_016107444v1 I 18 C 0 s aotNan1.NW_018503669v1 3710 2 + 69927 gc i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14785626 2 - 22200726 gc i proCoq1.NW_012133858v1 C 0 C 0 e mm10.chr16 32779359 387 + 98207768 I e micMur3.chr1 88375743 46 + 114275543 I e dasNov3.JH569502 2689495 400 - 6579706 M e calJac3.chr17 73820760 0 + 74750902 C e canFam3.chr33 2311042 0 - 31377067 C e otoGar3.GL873829 196799 706 + 608964 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=46909.000000 s hg38.chr3_KI270934v1_alt 44428 6 + 163458 accttc s panTro5.chr3 2516654 6 - 202621043 accttc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 57499 6 - 106623 ACCTTC i gorGor5.CYUI01000576v1 C 0 I 190 s nomLeu3.chr11 2832716 6 - 123690457 ACCTTC i nomLeu3.chr11 C 0 I 78 s rheMac8.chr2 2329825 6 - 204787373 ACcttc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395571 6 - 192460366 ACCTTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134909 6 - 19675229 ACcttc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367971 6 - 16847902 ACcttc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340911 6 + 91754291 ACCTTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407061 6 + 1977891 ACcttc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346092 6 - 7796314 ACCTTC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17267431 6 - 17725628 acttac i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6356371 6 + 6778120 ACCCTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 3712 6 + 69927 accttc i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14785628 6 - 22200726 acagtc i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 32779746 6 + 98207768 GCCCAA i mm10.chr16 I 387 C 0 s canFam3.chr33 2311042 2 - 31377067 ----tc i canFam3.chr33 C 0 C 0 e micMur3.chr1 88375743 46 + 114275543 I e dasNov3.JH569502 2689495 400 - 6579706 M e calJac3.chr17 73820760 0 + 74750902 C e otoGar3.GL873829 196799 706 + 608964 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=25104.000000 s hg38.chr3_KI270934v1_alt 44434 2 + 163458 cc s panTro5.chr3 2516660 2 - 202621043 cc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 57695 2 - 106623 CC i gorGor5.CYUI01000576v1 I 190 C 0 s nomLeu3.chr11 2832800 2 - 123690457 CC i nomLeu3.chr11 I 78 C 0 s rheMac8.chr2 2329831 2 - 204787373 cc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395577 2 - 192460366 CC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134915 2 - 19675229 cc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367977 2 - 16847902 cc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340917 2 + 91754291 CC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407067 2 + 1977891 cc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346098 2 - 7796314 CC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17267437 2 - 17725628 cc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6356377 2 + 6778120 CC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 3718 2 + 69927 cc i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14785634 2 - 22200726 cc i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 32779752 2 + 98207768 CT i mm10.chr16 C 0 C 0 s canFam3.chr33 2311044 2 - 31377067 cc i canFam3.chr33 C 0 C 0 e micMur3.chr1 88375743 46 + 114275543 I e dasNov3.JH569502 2689495 400 - 6579706 M e calJac3.chr17 73820760 0 + 74750902 C e otoGar3.GL873829 196799 706 + 608964 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=136955.000000 s hg38.chr3_KI270934v1_alt 44436 11 + 163458 -caggccaggcc s panTro5.chr3 2516662 11 - 202621043 -caggccaggcc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 57697 11 - 106623 -CAGGccaggcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832802 11 - 123690457 -CAGGccaggcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329833 11 - 204787373 -caggccaggcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395579 11 - 192460366 -CAGGccaggcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134917 11 - 19675229 -caggccaggcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367979 11 - 16847902 -caggccaggcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340919 11 + 91754291 -CAGGccaggcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407069 11 + 1977891 -caggccaggcc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346100 11 - 7796314 -CAGGccaggcc i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17267439 11 - 17725628 -caggccaggcc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6356379 11 + 6778120 -CAGGccaggcc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 3720 11 + 69927 -caggccaggcc i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88375789 11 + 114275543 -caggccaggcc i micMur3.chr1 I 46 C 0 s proCoq1.NW_012133858v1 14785636 11 - 22200726 -caggccaggcc i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 32779754 11 + 98207768 -CAAGCCAGAAC i mm10.chr16 C 0 C 0 s canFam3.chr33 2311046 11 - 31377067 ccatccaaggc- i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2689495 400 - 6579706 M e calJac3.chr17 73820760 0 + 74750902 C e otoGar3.GL873829 196799 706 + 608964 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=371121.000000 s hg38.chr3_KI270934v1_alt 44447 33 + 163458 tcagcacccccatct-gaaaatgagatgggattt s panTro5.chr3 2516673 33 - 202621043 tcagcacccccatct-gaaaatgagatgggattt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 57708 33 - 106623 tcagcacccccatct-gaaaatgagatgggattt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832813 33 - 123690457 tcagcacccccatct-gaaaatgagatgggattt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329844 33 - 204787373 tcagcacccccatct-gaaaatgagatgagattt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395590 33 - 192460366 tcagcacccccatct-gaaaatgagatgagattt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134928 33 - 19675229 tcagcacccccatct-gaaaatgagatgaaattt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16367990 33 - 16847902 tcagcacccccatct-gaaaatgagatgggattt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340930 33 + 91754291 tcagcacccccatct-gaaaatgagatgggattt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407080 33 + 1977891 tcagcacccccatct-gaaaatgagatgggattt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346111 33 - 7796314 tcagcacccccatct-gaaaatgagatgggattt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820760 32 + 74750902 -TCACACCCCCACCT-GAAAATGAGGTGGGATTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17267450 32 - 17725628 -tcagtacccctgct-gaaaatgaggtgggattt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6356390 32 + 6778120 -tcagtaccccacct-gaaaatgaggtggggttt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 3731 33 + 69927 tccataccccgacct-gaaaataaggtgggattt i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88375800 33 + 114275543 tcaacatccccatct-aaaaacgagacaggattt i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14785647 33 - 22200726 tcaacacccccgtct-gaaaatgagacaggattt i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 32779765 33 + 98207768 GCATGGTCCCAATGG-GAAAATGGGATGGGGTTT i mm10.chr16 C 0 C 0 s canFam3.chr33 2311057 34 - 31377067 ttgacacccccatgtggaaaaatagatgggattt i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2689495 400 - 6579706 M e otoGar3.GL873829 196799 706 + 608964 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=332739.000000 s hg38.chr3_KI270934v1_alt 44480 26 + 163458 ctgagccccctttcagtgctgacagc s panTro5.chr3 2516706 26 - 202621043 ctgagccccctttcagtgctgacagc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 57741 26 - 106623 ctgagccccctttcagtgctgacagc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832846 26 - 123690457 ctgagccccctttcagtgctgacagc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329877 26 - 204787373 ctgagccccctttcagtgctgacagc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395623 26 - 192460366 ctgagccccctttcagtgctgacagc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134961 26 - 19675229 ctgagccccctttcagtgctgacagc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16368023 26 - 16847902 ctgagccccctttcagtgctgacagc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340963 26 + 91754291 ctgagccccctttccgtgctgacagc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407113 26 + 1977891 ctgagccccctttcagtgctgacagc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346144 26 - 7796314 ctgagccccctttcagtgctgacagc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820792 26 + 74750902 CTGAGCCCCGTTTCAGTGCTGACAGC i calJac3.chr17 C 0 I 4 s saiBol1.JH378146 17267482 26 - 17725628 cggagccgcctttcagtgctgacagt i saiBol1.JH378146 C 0 I 4 s cebCap1.NW_016107444v1 6356422 26 + 6778120 ctgagccgcctttcagcgctgacGGC i cebCap1.NW_016107444v1 C 0 I 4 s aotNan1.NW_018503669v1 3764 26 + 69927 ctgagccccctttcagtgctgacaGC i aotNan1.NW_018503669v1 C 0 I 4 s micMur3.chr1 88375833 26 + 114275543 ccgaagccccttttaggtctgacagc i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14785680 26 - 22200726 ctgaggcccctcttagctctgacagc i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 32779798 8 + 98207768 ------------------CTGGCAGC i mm10.chr16 C 0 C 0 s canFam3.chr33 2311091 26 - 31377067 ctgaggtccccgtcagctgtgatgat i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2689896 26 - 6579706 ctgaggtccctttcagttctgacaat i dasNov3.JH569502 M 400 C 0 e otoGar3.GL873829 196799 706 + 608964 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=2204310.000000 s hg38.chr3_KI270934v1_alt 44506 181 + 163458 ccccggttttCCTGGAACAGGA-----ATAAGTTGGCAAGCTTGTC----------------------------AGAGAAACAAAGGAAT-----AA--CACGTCCTATTTTCTGT-ATAGGGCAGAGAACAGGGCAGGGGC--CGCCCCAAACACAACAGGAACTGCTGTTTTACTTGGGTCTGGGACCAAGCA--AGAGCTTCTCCCAGAATCCAGGCTAAGCC s panTro5.chr3 2516732 181 - 202621043 ccccggttctCCCGGAACAGGA-----ATAAGTTGGCAAGCTTGTC----------------------------AGAGAAACAAAGGAAT-----AA--CACGTCCTATTTTCTGT-ATAGGGCAGAGAACAGGGCAGGGGC--TGCCCCAAACACAACAGAAACTGCTGTTTTACTTGGGTCTGGGACCAAGCA--AGAGCTTCTCCCAGAATCCAGGCTAAGCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 57767 181 - 106623 ccccggttctCCCGGAACAGGA-----ATAAGTTGGCAAGCTTGTC----------------------------AGAGAAACAAAGGAATAACGCAA--CGCATCCTATTTTCTAT-ATAGGG-------CAGGGCAGTGGCCACACCCCAAACACAACAGAAACTGCTGTTTTACTTGGGTCTGGGACCAAGCA--AGAGCTTCTCCCAGAATCCAGGCTAAGCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2832872 176 - 123690457 ccctgtttctTCCAGAACAGGA-----ATAAGTTGGCAAGCTTGGC----------------------------AGAGAAACAAAGGAAT-----AA--CGCATCCTATTTTCTGT-ATAGGG-------CAGGGCAGTGGCCACACCCCAAACACAACAGAAACTGCTGTTTTACTTGGGTCTGGGACCAAGCA--AGAGCTTCTCCCAGAATCCAGGCTAAGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2329903 181 - 204787373 ccctggttctCCTGGAACAGGT-----ATAAGTTGGCAAGCTTGTC----------------------------AGAGTAACAAACGAAT-----AA--CACATCCTATTTTCTGT-ATAGGGCAGAGAATAGGGCAGTGGC--CACCCCAAACACAACAGAAAGTGCTGTTTTACTTGGGTCTGGGACCAAGCA--AGAGCTTCTCCTAGAATGCAGGCTAAGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395649 181 - 192460366 ccctggttctCCTGGAACAGGT-----ATAAGTTGGCAAGCTTGTC----------------------------AGAGTAACAAACGAAT-----AA--CACATCCTATTTTCTGT-ATAGGGCAGAGAATAGGGCAGTGGC--CACCCCAAACACAACAGAAAGTGCTGTTTTACTTGGGTCTGGGACCAAGCA--AGAGCTTCTCCTAGAATGCAGGCTAAGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19134987 181 - 19675229 ccctggttctCCTGGAACAGGT-----ATAAGTTGGCAAGCTTGTC----------------------------AGAGTAACAAACGAAT-----AA--CACATCCTATTTTCTGT-ATAGGGCAGAGAATAGGGCAGTGGC--CACCCCAAACACAACAGAAAGTGCTGTTTTACTTGGGTCTGGGACCAAGCA--AGAGCTTCTCCTAGAATGCAGGCTAAGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16368049 181 - 16847902 ccctggttctCCCGGAACAGGT-----ATAAGTTGGCAAGCTTGTC----------------------------AGAGTAACAAAGGAGT-----AA--TACATCCTATTTTCTGT-CTAGGGCAGAGAATAGGGCAGTGGC--CACCCCAAACACAACAGAAAGTGCTGTTTTACTTGGGTCTGGGACCAAGCA--AGAGCTTCTCCTAGAATGCAGGCTAAGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91340989 181 + 91754291 ccctggttctCCTGGAACAGGT-----ATAAGTTGGCAAGCTTGTC----------------------------AGAGTAACAAAGGAAT-----AA--CACATCCTATTTTCTGT-ATAGGGCAGAGAATAGGGCAGTGGC--CACCTCAAACACAACAGAAAGTGCTGTTTTACTTGGTTCTGGGACCAAGCA--AGAGCTTCTCCTAGAATGCAGGCTAAGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407139 181 + 1977891 ccctggttctCCCGGAACAGGT-----ATAAGTTGGCAAGCTTGTC----------------------------AGAGTAACAAAGGAGT-----AA--CACATCCTATTTTCTGT-CTAGGGCAGAGAATAGGGCAGTGGC--CACCCCAAACACAACAGAAAGTGCTGTTTTACTTGGGTCTGGGACCAAGCA--AGAGCTTCTCCTAGAATGCAGGCTAAGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346170 181 - 7796314 ccctgcttctCCCGGAACAGGT-----ATAAGTTGGCAAGCTTGTC----------------------------AGGGTAACAAAGGAAT-----AA--CACATCCTATTTTCTGT-ATAGGGCAGAGAATAGGGCAGTGGC--CACCCCAAACACAACGGAAAGTGCTGTTTTACTTGGGTCTGGGACCAAGCA--AGAGCTTCTCCTAGAACCCTGGCTAAGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73820822 181 + 74750902 CCCCTGTTCTCCCAGAACAGGA-----ATGAGTTGGCAAGCTTGTC----------------------------AGAGAAAGAAAAGAAT-----AA--CGCACCCTATTTTCTGG-ATGGGGCAGAGAATAGAGCAGCGGC--CATCCCAAACACAACAGAAACTGCTGTTTTACTCGGGTCCAGGAGCAAGCA--AGAGCTTCTTCTAGAATCCAGGTTAAGCC i calJac3.chr17 I 4 C 0 s saiBol1.JH378146 17267512 163 - 17725628 CCCCTGTTCTCCGGGAACAGGG-----ATAAGTTGGCGAGCTTGTC----------------------------AGAGAAAGAAAAGAAT-----AA--CGCACCTTATTTTCTGG-ATGGGGCAGAGAACAGAGCAGTGGC--CATCCCAAACACAACAGAAACTGCTGTTTGA------------------CA--AGAGCTTCTTCTAGAATCCAGGTTAAGCC i saiBol1.JH378146 I 4 C 0 s cebCap1.NW_016107444v1 6356452 181 + 6778120 CCCCTGTTCTCCCGGAACAGGA-----AGAAGTTGGCAAGCTTGTC----------------------------AGAGAAGGAAAAGAAT-----AA--CGCACCCTATTTTCTGG-ATGGGGCAGAGAATAGAGGAGTGGC--CATCCCAAACATAACAGAAACTGCCGTTTGACTCGGGTCCAGGAGCAAGCA--AGAGCTTCTTCTAGAATCCAGGTTAAGCC i cebCap1.NW_016107444v1 I 4 C 0 s aotNan1.NW_018503669v1 3794 180 + 69927 CCCCTGTTCTCCCGGAACAGGA-----ATAAGTTGGCAAGCTTGTC----------------------------AGAGAAAGAAAAGAAT-----AA--TGCACCCTGTTTTCTGG-ATGGGGCAGAGAACAGAGCAGTGGC--CGTCCC-AACACAACAGAAACTGCTGTTTTACTCGGGTCCAGGAGCAAGCC--AGAGCTTCTTCTAGAATCCAGGTCAAGCC i aotNan1.NW_018503669v1 I 4 C 0 s micMur3.chr1 88375859 187 + 114275543 ccctggttctCCTGGAACAGGAGT--GATAAGTTGGCAAGCTTGCC----------------------------AGAGACAGAAAGGACT-----AA--CCCACCCTATTTTCTGGAACAGGGCAAAGAATAGGGTAGTGAC--CAGTCTGAACACAACAGAAACTGCTGTTTCACTACGGTCCAGAACCAAGCAAGAGAGCTTCCCCTAGAATCCAGGTTAAGCC i micMur3.chr1 C 0 I 1544 s proCoq1.NW_012133858v1 14785706 185 - 22200726 ccctggttctCCTGGAACAGGAAT--GATGAGTTGGCAAGCTTGCC----------------------------AGAGACAGAAAGGACT-----AA--CCCACCCTATTTTCTGGAACGGGGCAAAGAATAGGGTAGTGAC--CAGTCTGAACACAACAGAAACTGCTGTTGTACTTGGATCCAGAACCAAGCA--AGAGCTTCTCCTAGAATCCAGATTAAGCC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 197505 210 + 608964 CTCTGGTTCTCCTGGAATAGGAAT--GATAAATTGGCAAGCTTGGCTACCAATTAACTAGCTGAAAGAAAGAAAAAAGAAAGAAAAGAAT-----GA-----ACCATATTTTCTGGAATGGGGCAGAGAATAGGATAGTGAC--CATTCTGAACACAGCAGAAACTGCTGTTTTACTTGGGTCCAGGACCAAGCA--AGAGATTCTCCTAGAATCCAGGTTAAGCC i otoGar3.GL873829 I 706 C 0 s mm10.chr16 32779806 168 + 98207768 CTCTGGTTCTCCTGG-GCAGGG-----A---------------GCA----------------------------AGGGAGACAGAGGAAC-----AGCCCCCTCCCTAGCTTCTGAAATGGAGCAGAGAATAGGGTAGGGAC--TATGCCCAACTTGGGAGAAACTGCTATTCAACTTGGGTCTAGCACCTGATG--AGAGCGGCTTCTAGAAACCAGTTTATGTT i mm10.chr16 C 0 C 0 s canFam3.chr33 2311117 155 - 31377067 ccctgattACCCCGAAACAAGAATGGGATCAGTTGGTAAGCTTGCC----------------------------AGAGGAGGAAAGGAAT-----AG--ACCACCCTATC-------CTAGG------AGTGAGGCAGTGAC--CACACCAAACCCTGCGGAAGCCGCTGTGTCACTGAGG-----------GTG--GGA--------TTGAATCCAGGCAGTGCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2689922 165 - 6579706 ccctgatgctC------------------AAATTGGCAACCTTACC----------------------------AAGGAGAAAAAGAAAG-----AA--CCAACTTTATTTTCCGGAATGGGGCAGAGAACAAGGCAGCAAC--TGTTCTAAACACAGCAGAAGCTGCTGTTTTACTTCAGACCAGGACCAGAAA--AGG----CTTCTAGAATCCTGGTGAAGCC i dasNov3.JH569502 C 0 C 0 e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=628027.000000 s hg38.chr3_KI270934v1_alt 44687 64 + 163458 CGCT--CTCTCCC-GGAGCAGGG-GGTGAAATCCCTCAGAACTACTGTATGT--------TGGGGAG-TTGGGGTAG----------------- s panTro5.chr3 2516913 64 - 202621043 CGCT--CTCTCCC-GGAGCAGGG-GGTGAAATCCCTCAGAACTACTGTATGT--------TGGGGAG-TTGGGGTAG----------------- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 57948 64 - 106623 TGCT--CTCTCCC-GGAGCAGTG-GGTGAAATCCCTCAGAACTACTGTATGT--------TGGGGAA-TTGGGGTAG----------------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2833048 64 - 123690457 CACT--CTCTCCC-GGAGCAGGG-GGTGAAATCCCTCAGAACTACTGTATGT--------TGGGGAG-TTGGGGTAG----------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2330084 64 - 204787373 TGCT--CTCTCCT-GGAGCAGTG-GGTGAAATCCCTCAGAACTACTGTATGT--------TGGGGAG-TTGGGGTAG----------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395830 64 - 192460366 TGCT--CTCTCCT-GGAGCAGTG-GGTGAAATCTCTCAGAACTACTGTATGT--------TGGGGAG-TTGGGGTAG----------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19135168 64 - 19675229 TGCT--CTCTCCT-GGAGCAGTG-GGTGAAATCTCTCAGAACTACTGTATGT--------TGGGGAG-TTGGGGTAG----------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16368230 64 - 16847902 TGCT--CTCTCCT-GGAGCAGTG-GGTGAAATCCCTCAGAACTACTGTATGT--------TGGGGAG-TTGGGGTAG----------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91341170 56 + 91754291 TGCT--CTCTCCT-GGAGCAGTG-GGTGAAATCCCTCAGAACTACTTTATGT--------TGGGGAG-T------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407320 64 + 1977891 CGCT--CTCTCCT-GGAGCAGTG-GGTGAAATCCCTCAGAACTACTGTATGT--------TGGGGAG-TTGGGGTAG----------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346351 64 - 7796314 TGCT--CTCTCCT-GGAGCAGTG-GGTGAAATCCCTCAGAACTACTGTATGT--------TGGGGAG-TTGGAGTAG----------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73821003 65 + 74750902 CCCT--CTCTCCT-GGAGGAACAAGATGAAATCCCTTAGAACTGCTGTATGT--------TGGCGAG-CTGGGGTAG----------------- i calJac3.chr17 C 0 I 912 s saiBol1.JH378146 17267675 65 - 17725628 CCCT--CTCTTCT-GGAGGAATAAGATGAAATCCCTCAGAACTACTATACGT--------TGGCGAG-TTGGGGTAG----------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6356633 66 + 6778120 CCCT--GTCTCCT-GGAGGAATAAGGAGAAATCCCTCAGAACTACTCTGTGT--------TGGCGAGTTTGGGGTCG----------------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 3974 65 + 69927 CCCT--CTCTCCT-GGAGGAATACGGTGAAATCCCTCAGAACTACTCTATGC--------TGGCGAG-TTGGGGTAG----------------- i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14785891 65 - 22200726 TCCT--CCCTCCT-GGGGCAACAAGGCAAAATCCCTCAGGACTACTATATGT--------TAAGGAG-TCAGGGTAG----------------- i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 197715 66 + 608964 TCCTTCCTCTCCC-AAGCCAACAAGGTGAAATCCCTCAGCACTACTGTGTGT--------TAAGG-G-CCAGGGTGG----------------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32779974 64 + 98207768 TCCT--GCCTTTT-GGAGCAGTAAAGTGAAGTCACTCC-AACTACTGTGCAT--------TGGGTAG-CTGCAGTGG----------------- i mm10.chr16 C 0 I 5 s canFam3.chr33 2311272 70 - 31377067 TCCT--CCCTCCTGGGGGCAACAATGTGAAATCCTCCA-AACTACTTTGTGTATGTGTGGTAGGGCG-TTAGGG-------------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2690087 68 - 6579706 ----------CTC-GCAACATCA------AAGTCCTTAAAACCACTGTGTGT--------GTGGGAG-TTGTGGGGGGGGCGGTGTTTGAATAG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88376046 1544 + 114275543 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=133534.000000 s hg38.chr3_KI270934v1_alt 44751 24 + 163458 GAGGCGCAGGGAGGC------------A--------AG-------CCCTGA---- s panTro5.chr3 2516977 24 - 202621043 GAGGCACAGGGAGGC------------A--------AG-------CCCTGA---- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 58012 24 - 106623 GAGGCGCAGGGAGGC------------A--------AG-------CCCTGA---- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2833112 24 - 123690457 GAGGCGCAGGGAGGC------------A--------AG-------CCCTGA---- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2330148 24 - 204787373 GAGGCCCAGGGAGGC------------A--------AA-------CCCTGA---- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395894 24 - 192460366 GAGGCCCAGGGAGGC------------A--------AA-------CCCTGA---- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19135232 24 - 19675229 GAGGCCCAGGGAGGC------------A--------AA-------CCCTGA---- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16368294 24 - 16847902 GAGGCCCAGGGAGGC------------A--------AA-------CCCTGA---- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91341226 8 + 91754291 ------------------------------------AA-------CCCTGA---- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407384 24 + 1977891 GAGGCCCAGGGAGGC------------A--------AA-------CCCTGA---- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346415 24 - 7796314 GAGGCCCGGGGAGGC------------A--------AA-------CCCTGA---- i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17267740 23 - 17725628 GAGGAGCAGGAAGG-------------A--------AG-------CTCTGA---- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6356699 24 + 6778120 GAGGAGCAGGAAGGC------------G--------AG-------CTCTGA---- i cebCap1.NW_016107444v1 C 0 I 636 s aotNan1.NW_018503669v1 4039 24 + 69927 GAGGAGCAGGAAGGC------------A--------AG-------CTCTGA---- i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14785956 36 - 22200726 GAGGAGTGGGGAGGCAGTAAGGGAGCAA--------AG-------ACCTCA---- i proCoq1.NW_012133858v1 C 0 I 7 s otoGar3.GL873829 197781 33 + 608964 GAGGAGT-AGGAGGCAGTAAGGGAGCAA--------AG-------CCCT------ i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32780043 31 + 98207768 CAGGCACAGTCAGGT------------A--------AGGGGGCATCCCCGA---- i mm10.chr16 I 5 C 0 s canFam3.chr33 2311342 32 - 31377067 GTGGCATACGGACAC------------AACTCCCCTAG-------ACCTGA---- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2690155 27 - 6579706 GAGG-ATAAGGAAAC------------A--------AC-------TCCTCCAAAC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88376046 1544 + 114275543 I e calJac3.chr17 73821068 912 + 74750902 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=53901.000000 s hg38.chr3_KI270934v1_alt 44775 5 + 163458 CTATG s panTro5.chr3 2517001 5 - 202621043 CTATG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 58036 5 - 106623 CTATG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2833136 5 - 123690457 CTATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2330172 5 - 204787373 CTATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395918 5 - 192460366 CTATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19135256 5 - 19675229 CTATG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16368318 5 - 16847902 CTATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91341234 5 + 91754291 CTATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407408 5 + 1977891 CTACG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346439 5 - 7796314 CTATG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17267763 5 - 17725628 TTGTG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 4063 5 + 69927 CTACG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14785999 5 - 22200726 CTATG i proCoq1.NW_012133858v1 I 7 C 0 s otoGar3.GL873829 197815 5 + 608964 CATTG i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32780074 5 + 98207768 CTGTG i mm10.chr16 C 0 I 573 s canFam3.chr33 2311374 5 - 31377067 CTGTG i canFam3.chr33 C 0 I 18 s dasNov3.JH569502 2690182 5 - 6579706 CTATG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88376046 1544 + 114275543 I e calJac3.chr17 73821068 912 + 74750902 I e cebCap1.NW_016107444v1 6356723 636 + 6778120 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=45997.000000 s hg38.chr3_KI270934v1_alt 44780 8 + 163458 ---CAATTAAG s panTro5.chr3 2517006 8 - 202621043 ---CAATTAAG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 58041 8 - 106623 ---CAATTAAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2833141 8 - 123690457 ---CAATTAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2330177 8 - 204787373 ---CAATTAAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395923 8 - 192460366 ---CAATTAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19135261 8 - 19675229 ---CAATTAAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16368323 8 - 16847902 ---CAATTAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91341239 8 + 91754291 ---CAATTAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407413 8 + 1977891 ---CAATTAAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346444 8 - 7796314 ---CAATTAAG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17267768 8 - 17725628 ---CTATTAAA i saiBol1.JH378146 C 0 I 620 s aotNan1.NW_018503669v1 4068 8 + 69927 ---CTATTAAA i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14786004 8 - 22200726 ---CTGATAAA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 197820 8 + 608964 ---TTTAAAAA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2311397 7 - 31377067 ---CAACCAA- i canFam3.chr33 I 18 C 0 s dasNov3.JH569502 2690187 11 - 6579706 TCTTTTTTAAA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32780079 573 + 98207768 I e micMur3.chr1 88376046 1544 + 114275543 I e calJac3.chr17 73821068 912 + 74750902 I e cebCap1.NW_016107444v1 6356723 636 + 6778120 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=85334.000000 s hg38.chr3_KI270934v1_alt 44788 8 + 163458 GAAAACCT------------------- s panTro5.chr3 2517014 8 - 202621043 GAAAACCT------------------- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 58049 8 - 106623 GAAAACCT------------------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2833149 8 - 123690457 GAAAACCT------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2330185 8 - 204787373 GAAAACCT------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395931 8 - 192460366 GAAAACCT------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19135269 8 - 19675229 GAAAACCT------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16368331 8 - 16847902 GAAAACCT------------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91341247 8 + 91754291 GAAAACCT------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407421 8 + 1977891 GAAAACCT------------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346452 8 - 7796314 GAAAACCT------------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73821980 8 + 74750902 GAAAACCT------------------- i calJac3.chr17 I 912 I 1 s saiBol1.JH378146 17268396 8 - 17725628 GAAAACCT------------------- i saiBol1.JH378146 I 620 I 1 s cebCap1.NW_016107444v1 6357359 8 + 6778120 GAAAACCT------------------- i cebCap1.NW_016107444v1 I 636 I 1 s aotNan1.NW_018503669v1 4076 8 + 69927 GAAAACCT------------------- i aotNan1.NW_018503669v1 C 0 I 612 s proCoq1.NW_012133858v1 14786012 8 - 22200726 GAAAACCC------------------- i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 197828 8 + 608964 AAACACAC------------------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2311404 8 - 31377067 GAAACCCC------------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2690198 27 - 6579706 GAAAACAAACAAAAACACACCCCCCAC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32780079 573 + 98207768 I e micMur3.chr1 88376046 1544 + 114275543 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=-1882.000000 s hg38.chr3_KI270934v1_alt 44796 2 + 163458 AT s panTro5.chr3 2517022 2 - 202621043 AC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 58057 2 - 106623 AT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2833157 2 - 123690457 AT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2330193 2 - 204787373 AT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395939 2 - 192460366 AT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19135277 2 - 19675229 AT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16368339 2 - 16847902 AT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91341255 2 + 91754291 AT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407429 2 + 1977891 AT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346460 2 - 7796314 AT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73821989 1 + 74750902 A- i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17268405 1 - 17725628 A- i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 6357368 1 + 6778120 A- i cebCap1.NW_016107444v1 I 1 C 0 s proCoq1.NW_012133858v1 14786020 2 - 22200726 AC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 197836 2 + 608964 AC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2311412 2 - 31377067 AC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2690225 2 - 6579706 AC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32780079 573 + 98207768 I e aotNan1.NW_018503669v1 4084 612 + 69927 I e micMur3.chr1 88376046 1544 + 114275543 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=2912871.000000 s hg38.chr3_KI270934v1_alt 44798 287 + 163458 AAtttttattatac---aagcatcgtatgtttattgcagaaactttaggaaacacaaacttaacaaaaagaaaagagga---aaaaaa--ccctgtaatcccaatccccagagagacaacagtatttcctacatatccttctgaact---ttctttt--atgc-ctaggaaccttcagac--atccatttttt-----actgaagg----atcaAATCATTCCTAATGTTGGAAAACCTC---CTCA-TTAAACAGTTGTGAACAGGTTG------TCTCATATAT-TCTGTCCACATTCCCATTT-----------------------------------------------------------GACATA-----TTATGATGGTA s panTro5.chr3 2517024 286 - 202621043 AAtttttattatac---aagcatcgtacatttattgcagaaactttaggaaacacaaacttaacaaaaagaaaagagga---aaaaaa--ccctgtaatcccaatccccagagagacaacaatatttcgtacatatccttctgaact---ttctttt--atgc-ctaggaaccttcacac--attgatttttt-----attgaag-----atcaaatcatTCCTAATGCTGGAGAACCTC---CTGA-TTAAACAGTTGTGAACAGGTTG------TCTCATATAT-TCTGTCCACATTCCCATTT-----------------------------------------------------------GCCATA-----TTATAATGGTA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 58059 287 - 106623 AAtttttattatac---aagcatcgtatgtttattgcagaaactttaggaaacacaaacttaacaaaaagaaaagagga---aaaaaa--ccctgtaatcccaatccccagagagacaacaatatttcgtacatatccttctgaact---ttctttt--atgc-ctaggaaccttcacac--attgatttttt-----attgaagg----atcaAATCATTCCTAATGTTGGATAACCTC---CTCA-TTAAACAATTGTGAACAGGTTG------TCTCATATAT-TGTGTCCATATTCCCATTT-----------------------------------------------------------GCCATA-----TTATAATGGTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2833159 286 - 123690457 AAtttttattatac---aagcatcgtatgtttattgcagaaactttaggaaac-caaacttaacaaaaagaaaaaagga---aaaaaa--ccctgtaatcccaacccccagagagacaacaatatttcatacatatccgtctgaact---ttctttt--atgc-ctaggaaccttcacac--atcgatttttt-----attgaagg----atcaaatcattcctaatgttggataacctg---ctCG-TTCAACAATTGTGAACAGGTTG------TCTCATATAT-TGTGTCCATATTCCCATTT-----------------------------------------------------------GACATA-----TTATAATGGTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2330195 286 - 204787373 AAtttttattatac---aagtatcctatgtttattgcagaaactttaggaaacacaaatttaacaaaaagaaaagaggg---aaaaaa--ccctgtaatcccaatccccagagagacaacaatattttgtacatatccttctgaact---ttcattt--atgc-ctaagaa-cttcacac--atcgatttttt-----aTTGAAGG----ATCAAATCATTCCTAATGTTTGATAACCTC---CTCG-TTAAACATTTGTGAACAGATTG------TCTCATATAT-TGTATCCATATTCCCATTT-----------------------------------------------------------GACATA-----TTATAATGGTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192395941 286 - 192460366 AAtttttattatac---aagtatcctatgtttattgcagaaactttaggaaacacaaatttaacaaaaagaaaagagga---aaaaaa--ccctgtaatcccaatccccagagagacaacaatattttgtacatatccttctgaact---ttcattt--atgc-ctaagaa-cttcacac--atcgatttttt-----attgaagg----atcaaatcattcctaatgtttgataacctc---ctCG-TTAAACATTTGTGAACAGATTG------TCTCATATAT-TGTATCCATATTCCCATTT-----------------------------------------------------------GACATA-----TTATAATGGTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19135279 286 - 19675229 AAtttttattatac---aagtatcctatgtttattgcagaaactttaggaaacacaaatttaacaaaaagaaaagaggg---aaaaaa--ccctgtaatcccaatccccagagagacaacaatattttgtacatatccttctgaact---ttcattt--atgc-ctaagaa-cttcacac--atcgatttttt-----aTTGAAGG----ATCAAATCATTCCTAATGTTTGATAACCTC---CTCG-TTAAACATTTGTGAACAGATTG------TCTCATATAT-TGTATCCATATTCCCATTT-----------------------------------------------------------GACATA-----TTATAATGGTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16368341 286 - 16847902 AAtttttattatac---aagtatcctatgtttattgcagaaactttaggaaacacaaatttaacaaaaagaaaagagga---aaaaac--ccctgtaatcccaatccccagagagacaacaatattttgtacatatccttctgaact---tcctttt--atgc-ctaagaa-cttcacac--atcgatttttt-----aTTGAAGG----ATCAAATCATTCCTAATGTTTGATAACCTC---CTCG-TTAAACATTTGTGAACAGATTG------TCTCATATAT-TGTATCCATATTCCCATTT-----------------------------------------------------------GACATA-----TTATAATGGTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91341257 285 + 91754291 AAtttttattatac---aagtatcctatgtttattgcagaaactttaggaaacacaaatttaacaaaaagaaaagagga---aaaaac--ccctgtaatcccaatccccagagagacaacaata-tttgtacatattcttctgaact---ttcgttt--acac-ctaagaa-cttcacat--atcgatttttt-----attgaagg----atcaaatcattcctaatgtttgataacctc---ctCG-TTAAACAATTGTGAACAGATTG------TCTCATATAT-TGTATCCATATTCCCATTT-----------------------------------------------------------GACATA-----TTATAATGGTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407431 286 + 1977891 AAtttttattatac---aagtatcctatgtttattgcagaaactttaggaaacacaaatttaacaaaaagaaaagagga---aaaaac--ccctgtaatcccagtccccagagagacaacaatattttgtacatatccttctgaact---tccgttt--atgc-ctaagaa-cttcacac--atcgatttttt-----aTTGAAGG----ATCAAGTCATTCCTAATGTTTGATAACCTC---CTCG-TTAAACATTTGTGAACAGATTG------TCTCATATAT-TGTATCCATATTCCCATTT-----------------------------------------------------------GACATA-----TTATAATGGTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346462 288 - 7796314 AATTTTTATTATAC---AAGTATCCTATATTTATTGCAGAAACTTTAGGAAACACAAATTGAACAAAAAGAAAAGAGGA---AAAAG---CCCTGTAATGCCAATCCCTAGAGAGACAACAATATTTTGTACACATCCTTCTGAACTTTCTTCTTTT--ATGC-TTAAGAA-CTTCACAC--ATCGATTTTTT-----ATTGAAGG----ATCAAATCATTCCTAATGTTTGATAACCTC---CTCG-TTAAACAATTGTGAACAGATTG------TCTCATATAT-TGTATCCATATTCCCATTT-----------------------------------------------------------GACATA-----TTATAATGGTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73821990 287 + 74750902 AAtttttgttatat---aagtatcatatgtttactgcagaaactgtaggaaacaaacatttaacaaaaagaagagagaagaaagaaaa--acctgtaattcccgtgcccagag-----acaatattttgtgcatttccttctgagct---ttctttt--atgc-cgaggaaccttcacac--ggtggcttttt-----actgaagg----atcaaatcgttcctaatgtttggtaacctc---cttc-ttCAACAGTTGTGAACAGACAA------TCTCATGTGC-TGTGTCCATGTTCCCATTT-----------------------------------------------------------CACATATTGCTTTATAA---TA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17268406 290 - 17725628 AAtttttattatat---aagtatcatatgtttattgcagaaactttaggaaacatacatttaacaaaaagaagagagaagatagaaaa--acctgtaattccaatccccagag-----acaatattttgtacatatccttctgaact---ttctttt--atgc-ctaGGAACCTTCACAC--ACTGGTTTTTT-----ATTGAAGG----ATCAAATCGTTCCTAATGTTTGATAACCTC---CTCC-TTAAACAGTTGTGAACAGAGTA------TCTCATATAT-TGTGTCCATATTCCCATTG-----------------------------------------------------------GACATATTGCCTTATAATGGTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6357369 296 + 6778120 AAtttttattatataagaagtatcatatgtttattgcagaaactttaggaaacatacatttaacaaaaagaagagagaagaaagaaaa--acctgtaattccaatccccagag--acaacaacattttgtacatacccttctgaact---ttctttt--atgc-ctaGGAACCTTCACAC--GTTGGTTTTTT-----ATTGAAGG----ATCGAATCATTCCTAATGTCTGACAACCTC---CTCC-TTACACAGCTGTGAACAGAGTA------TCTCATCTAT-CATGTCCATATTCCCATTT-----------------------------------------------------------GACATATTGCCTTATAATGGTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 4696 290 + 69927 AAtttttattatat---aagtatcatatgtttattgcagaaactttaggaaacatacatttaacaaaaaga--agagaagaaagaaaa--ccctgcaattccaacccccagag--acaacaatattttgtacatacctttctgaacc---ttctttt--atgc-CTCGGAACCTTCACAC--ATTGGCTTTTT-----ATTGAAGG----ATCAAAT-ATTCCTAATATTTCATAAGCTC---CTCC-TTAAGCAGTTGTGAACAGAGTA------TCTCATATAT-TGTGTCAATATTCCCATTT-----------------------------------------------------------GACATATTGCCTTATAATGGTA i aotNan1.NW_018503669v1 I 612 C 0 s proCoq1.NW_012133858v1 14786022 282 - 22200726 AATTTCTATTATAT---GAGTATAATATGTTTATTGCAGAAACTCTAGGAAACACAAA-TTAACAAAAAGA--AGGAAA---AAAATA--ACCCATAATCCCAATCCTCAGAG--ACAACTATATTTTGTACACATCCTTCTGAACT---TTCTTTT--GTGC-CTAGGAACTTTCACACATATCAATTTTTT-----ATTAAGGG----ATCAAATCATACCTAATGTTTGATAACCTC------A-TTAAACAATTATGACCATATT-------ACTCATATAT-TGTGTCTATATTTCCATTT-----------------------------------------------------------GACATATTATTTTATGATA--- i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 197838 346 + 608964 AATTAATATTA---------TACAatatgtttattatagaaactttaggaaacacaaa-ttaacaaaaataagaggaaa---gaaaca--acctgtaattccaatcctcagag--ataacaatattttgtacat-cccctctgaact---tattttt--atgc-ataGGAGCCTTCACACACATCAATTCTTT-----ATTAAGGAATGCATTACCTCATATGTTACGTGT-ATATTCCA------A-TTTGAC-ATATTGCATATGTTTGAATACAGTCATATATATATATATATATTTCTTTTttttttttcagtttttggccagggctgggtttgaacccgccacctctggcatatggggccggcatctcacttctttgag--- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2311414 292 - 31377067 AGtttttattatac---aagtacaatatgtttattgtagaaacttgaggagacacaga-ttaacaaaaggaagagagaa---aaaaaatcacgtgtaattccaagccccaaag--acaagtccattttgcacctatccttctgaatt---ttctttt--atgcattaggagtcttcacacataccaatattttttataataagggg----atcaagtagtacctaatgtttggtgacctt---attacttaagcaattgtgaacatatta------ccttgtatat-tgtatatgtgttcccattt-----------------------------------------------------------attatt-----ttATCATA--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2690227 274 - 6579706 AACTTTAATTATAT---AA-TGCAATGTGTTTATTGCAGAGATTTTAGGAAACACG---TTAaaaaaa--------------aaaatc--acctataatctcaatccccagag--acaactctattttgaacatatccttttgaact---ttatttttcgtac-acagggaccttcaaatatattaatttgtt-----a---agga----atcaaatcatacCTAATGCTTGAAGACCTTTCATTAG-TTAAACAATTGTGAACATATTA------CCTTGAATAT-TGTGTAACTATTCCCATTT-----------------------------------------------------------GATATGCTATTTTATCA----- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32780079 573 + 98207768 I e micMur3.chr1 88376046 1544 + 114275543 I e panPan2.chrUn_NW_014024201v1 105426 3599 - 190779 I a score=261877.000000 s hg38.chr3_KI270934v1_alt 45085 25 + 163458 ----TGTTTGAATAT-----AGTGT----CATAT--TTTA s panTro5.chr3 2517310 25 - 202621043 ----TGTTTGAATAT-----AGTGT----CATAT--TTTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109025 24 - 190779 ----TGTTTGAATAT-----AGTGT----CATAT--TTT- i panPan2.chrUn_NW_014024201v1 I 3599 C 0 s gorGor5.CYUI01000576v1 58346 25 - 106623 ----TGTTTGAATAT-----AGTGT----CATAT--TTTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2833445 25 - 123690457 ----TGTTTGAATAT-----AGTGT----CATAT--TTTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2330481 25 - 204787373 ----GGTTTGAATAT-----AGTGT----CATAT--TTTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192396227 25 - 192460366 ----GGTTTGAATAT-----AGTGT----CATAT--TTTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19135565 25 - 19675229 ----GGTTTGAATAT-----AGTGT----CATAT--TTTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16368627 25 - 16847902 ----GGTTTGAATAT-----AGTGT----CATAT--TTTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91341542 25 + 91754291 ----GGTTTGAATAT-----AGTGT----CATAT--TTTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407717 25 + 1977891 ----GGTTTGAATAT-----AGTGT----CATAT--TTTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346750 25 - 7796314 ----GGTTTGAATAT-----AGTGT----CATCT--TTTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73822277 25 + 74750902 ----CATTTGAATAT-----AGTGT----CACAT--TTTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17268696 25 - 17725628 ----TGTATGAATAT-----AGTGG----CATAT--TTTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6357665 25 + 6778120 ----TGTTTGAATGT-----AGTGT----CACAT--TTTA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 4986 25 + 69927 ----TGTTTGAATAT-----AGTGT----CGTAT--TCTA i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14786304 26 - 22200726 ----TGTTTGAAGAT-----AGTGT----CTTATA-TTTT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 198184 32 + 608964 ----ccataggagctgcccCAGTGT----CTTATATTTTT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2311706 27 - 31377067 ----CATTTTAATGT-----GGTGTGC--TATAt--ttta i canFam3.chr33 C 0 I 572 s dasNov3.JH569502 2690501 32 - 6579706 TGATTCGTTGaatat-----aatgtattatatat--ttt- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32780079 573 + 98207768 I e micMur3.chr1 88376046 1544 + 114275543 I a score=1405203.000000 s hg38.chr3_KI270934v1_alt 45110 131 + 163458 AAATACATTataataatcattaccattgtttgagtgcttactgtgtgtccggcactgtactgagtactgtg--gacacattatctcatttaaatctcacagcagcataagtgctattatg-atcatttcctttt s panTro5.chr3 2517335 127 - 202621043 AAATACATTataataatcattaccattg----agtgcttactgtgtgtccggcactgtactgagtactgtg--gacacattatctcatttaaatctcacagcagcataagtgctattatg-atcatttcctttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109049 127 - 190779 AAATACATTataataatcattaccattg----agtgcttactgtgtgtccggcactgtactgagtactgtg--gacacattatctcatttaaatctcacagcagcataagtgctattatg-atcatttcctttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 58371 131 - 106623 AAATACGTTataataatcattaccattgtttgagtgcttactgtgtgtccggcagtgtactgagtactgtg--gacacattatctcatttaaatctcacagcagcataagtgctattatg-atcatttcctttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2833470 131 - 123690457 AAATACGTTataataatcattaccatttttggagtgcttactgtgtgtcaggcagtgtactgagtactgtg--gacacattatctcatttaaatctcacagcagcataagtgctattatg-atcatttcctttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2330506 131 - 204787373 AAATACATTAGaataatcatttccattttttgagtgcttactgtgtgtcaggcagtgtactgagtactgtg--gacatattacctcatttaaatctcacagcagcataagtgctattatg-atcatttcctttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192396252 131 - 192460366 AAATACATTAGaataatcatttccattttttgagtgcttactgtgtgtcaggcagtgtactgagtactgtg--gacatattacctcatttaaatctcacagcagcataagtgctattatg-atcatttcctttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19135590 131 - 19675229 AAATACATTAGaataatcatttccattttttgagtgcttactgtgtgtcaggcagtgtactgagtactgtg--gacatattacctcatttaaatctcacagcagcataagtgctattatg-atcatttcctttt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16368652 131 - 16847902 AAATACGTTAGaataatcattaccattttttgagtgcttactgtgtgtcaggcagtgtactgagtactgtg--gacatattacctcatttaaatctcacagcagcataagtgctattatg-atcatttcctttt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91341567 131 + 91754291 AAATACGTTAGaataatcattaccattttttgattgcttactgtgtgtcaggcagtgtactgagtactgtg--gacatattaccccatttaaatctcacagcagcataagtgctattatg-atcatttcctttt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407742 131 + 1977891 AAATACATTAGaataatcattaccattttttgagtgcttactgtgtgtcaggcagtgtactgagtactgtg--gacatattacctcatttaaatctcacagcagcataagtgctattatg-ataatttcctttt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346775 131 - 7796314 AAATACGTTAGaataatcattaccattttttgagtgcttactgtgtgtcaggcagtgtactgagtactgtg--gacatattacctcatttaaatctcacagcagcataagtgctattatg-atcatttcctttt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73822302 121 + 74750902 AAATACGTTataataaccattttcgttttttgagggtttactgtgtgtcaggcagtgtacggagtattgtg--gacacgttatctcatttaaatctcacagcagcgtaagt-----------tcctgtgctttt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17268721 121 - 17725628 AAATGTGTTataatagtcatttccattttttgagtgtttactgtgtgttgggcagtgtactaagtattgtg--gatatattatctcatttaaatctcacagcagcgtaagt-----------tcctatgctttt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6357690 121 + 6778120 AAATATGTTataataatcatttccattttttgagtgtttactgtgtgtcgggcagtgtactaagtattgtg--gacatattatctcatttaaatctcaccgcagtgtaagt-----------tcctatgctttt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 5011 121 + 69927 AAATATGTTataataatcatttccattttttgagtgtttactctgtgtcaggcagtgtactgggtattgtg--gacatattatctcatttaaatctcacagcagcgtaagt-----------tccgatgccttt i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14786330 116 - 22200726 Aaatata---tcataataattaccatttgctgagtgcttactatgcgtcaggcactgtactgagtactc------tgctttatctcatttaaatctcac--------aagtgctattatt-atcatttcctttt i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 198216 126 + 608964 AAATATAAGGTCATGaaagttaccatttgctgagggcttac-atgtgtcaggcactgtaatgagtaccctg--tatgcattatctcacttaaatctcacaacaaagtaagtgctattattaatcatttt----- i otoGar3.GL873829 C 0 I 334 s dasNov3.JH569502 2690533 118 - 6579706 aaatatGTTATaataataaccactgttttt------------gagtatcaggcactgcacagagtactcttcctatatattatctcatttaaatttcacaacaaagtagttgctatt----atcgtttcctttt i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32780079 573 + 98207768 I e micMur3.chr1 88376046 1544 + 114275543 I e canFam3.chr33 2311733 572 - 31377067 I a score=1383394.000000 s hg38.chr3_KI270934v1_alt 45241 109 + 163458 aaagataaggaaactgaagctgaaagagtgaaggaa----t-----------------------------gttccctgaattacacatctagtcactagcagagtttcagtttccacccaagtctggccaccttcaaagca--t s panTro5.chr3 2517462 109 - 202621043 aaagataaggaaactgaagctgaaagagtgaaggaa----t-----------------------------gttccctgaattacacatctagttactagcagagtttcagtttccacccaagtctggccaccttcaaagca--t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109176 109 - 190779 aaagataaggaaactgaagctgaaagagtgaaggaa----t-----------------------------gttccctgaattacacatctagttactagcagagtttcagtttccacccaagtctggccaccttcaaagca--t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 58502 109 - 106623 aaagataaggaaactgaagctgaaagagtgaaggaa----t-----------------------------gttccctgaattacacatctagttaccagcagagtttcagtttccacccaagtgtggccaccttcaaagca--t i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2833601 109 - 123690457 aaagataaggaaactgaagctgaaagagtgaaagag----t-----------------------------gttccctgaattacacgtctagtaactagcagagtttcagtttccacccaggtctggccaccttcaaagca--t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2330637 109 - 204787373 aaagataaggaaactgacactgaaagagttaaggaa----t-----------------------------gttccctgaattacacatctagttactagtagagtttcagtttcaacccaggtctggccaccttcaaagca--t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192396383 109 - 192460366 aaagataaggaaactgacactgaaagagttaaggaa----t-----------------------------gttccctgaattacacatctagttactagtagagtttcagtttcaacccaggtctggccaccttcaaagca--t i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19135721 109 - 19675229 aaagataaggaaactgacactgaaagagttaaggaa----t-----------------------------gttccctgaattacacatctagttactagtagagtttcagtttcaacccaggtctggccaccttcaaagca--t i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16368783 109 - 16847902 aaagataaggaaactgacactgaaagagttaaggaa----t-----------------------------gttccctgaattacacatctagttactagtagagtttcagtttcaacccaggtctggccaccttcaaagca--t i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91341698 108 + 91754291 aaagataaggaaactgacactgaaagagttaa-gaa----t-----------------------------gttccctgaattacacatctagttactagtagagtttcagtttcaacccgggtctggccaccttcaaagca--t i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407873 109 + 1977891 aaagataaggaaactgacactgaaagagttaaggaa----t-----------------------------gttccctgaattacacatctagttactagtagagtttcagtttcaacccaggtctggccaccttcaaagca--t i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7346906 109 - 7796314 aaagataaagaaactgacactgaaagagttaaggaa----t-----------------------------gttccctgaattacacatctagttactagtagaggttcagtttcaacccaggtctggccaccttcaaagca--t i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73822423 106 + 74750902 agacataaggaaactgaagctgca-gagataaggag----t-----------------------------gttccctgaattacacaactagctaccagt-gagtttgagtttcaactcaggtctggccaccttcaaagcA--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17268842 108 - 17725628 aaacataaggaaactgagactgcacgaggtaaggaa----t-----------------------------gttccctgaatcacacaactagttacgagcagagtttgagtttcgactccggtctggccaccttcaaagcA--- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6357811 113 + 6778120 aaacacaaggaaactgaagctgcaagagataaggaacgttc-----------------------------gttcccggaatcacacaactagttaggagcagagtttgagtttcaactcaggtctggccaccttcaaagcAT-- i cebCap1.NW_016107444v1 C 0 I 209 s aotNan1.NW_018503669v1 5132 108 + 69927 aaacataaggaaactgaagctgcacgagataaggaa----t-----------------------------gttccctgaatcacacaactagttacg-gcagagtttgagtttcaactcaggtctggccgccttcaaagcA-T- i aotNan1.NW_018503669v1 C 0 I 144 s proCoq1.NW_012133858v1 14786446 109 - 22200726 aaagataaggaaactgaggctgaaagagttaagaaa----t-----------------------------ttcccctgaatcacacagctagttaatagtagactctgagttgcaactcaggtctggccaagttcaaagca--t i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 198676 109 + 608964 aaagataaggaaactgaggctaaaagagttaagaaa----g-----------------------------ctcccctaagtcgcgcagctagttaatagtagaatctgagttaccaatcaagtctgatgaacctcaaagca--t i otoGar3.GL873829 I 334 C 0 s canFam3.chr33 2312305 138 - 31377067 AAagataaggaaactgaggctgaaggagttaagaaa----tttccccCCCCCCCAAAAAAAAAAaagaaatttccccaaagcacacaactagttagtagtagagcttgaatttcaacgtaggtctggtttacttcaaagcg--t i canFam3.chr33 I 572 C 0 s dasNov3.JH569502 2690651 108 - 6579706 aaagataaggaagctgaggccgaaagagttaagaaa----t-----------------------------ttcccccaaaccacacaactagtaaatagt-gagtttgagtttcaagtcaagtctggccaacttccaaaca--c i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32780079 573 + 98207768 I e micMur3.chr1 88376046 1544 + 114275543 I a score=110152.000000 s hg38.chr3_KI270934v1_alt 45350 15 + 163458 gtgctcttCAGGAAA s panTro5.chr3 2517571 15 - 202621043 gtgctcttCAGGAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109285 15 - 190779 gtgctcttCAGGAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 58611 15 - 106623 gtgctcttCAGGAAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2833710 15 - 123690457 gtgctcttCAGGAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2330746 15 - 204787373 acgctctttAGGAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192396492 15 - 192460366 acgctctttAGGAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19135830 15 - 19675229 acgctctttAGGAAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16368892 15 - 16847902 acgctctttAGGAAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91341806 15 + 91754291 acgctctttAGGAAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407982 15 + 1977891 acactctttAGGAAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7347015 15 - 7796314 acactctttAGGAAA i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 14786555 15 - 22200726 atgctctttGCGAAA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 198785 15 + 608964 acactccttagtaaa i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2312443 15 - 31377067 atgctcttaaaaaaa i canFam3.chr33 C 0 I 58 s dasNov3.JH569502 2690759 15 - 6579706 gtgcttttaaccatc i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32780079 573 + 98207768 I e aotNan1.NW_018503669v1 5240 144 + 69927 I e micMur3.chr1 88376046 1544 + 114275543 I e saiBol1.JH378146 17268950 0 - 17725628 C e calJac3.chr17 73822529 0 + 74750902 C e cebCap1.NW_016107444v1 6357924 209 + 6778120 I a score=48231.000000 s hg38.chr3_KI270934v1_alt 45365 12 + 163458 GCATTTTCCATA s panTro5.chr3 2517586 12 - 202621043 GCATTTTCCATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109300 12 - 190779 GCATTTTCCATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 58626 12 - 106623 GCATTTTCCATA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2833725 12 - 123690457 GCATTTTCCCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2330761 10 - 204787373 GCATTTTCCA-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192396507 10 - 192460366 GCATTTTCCA-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19135845 10 - 19675229 GCATTTTCCA-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16368907 10 - 16847902 GCATTTTCCA-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91341821 3 + 91754291 GCA--------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1407997 10 + 1977891 GCATTTTCCA-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7347030 10 - 7796314 GCATTTTCCG-- i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 14786570 12 - 22200726 GCATTTTCCTTA i proCoq1.NW_012133858v1 C 0 I 16 s otoGar3.GL873829 198800 12 + 608964 gcattttCCACA i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2690774 12 - 6579706 atgttTTCTATT i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32780079 573 + 98207768 I e aotNan1.NW_018503669v1 5240 144 + 69927 I e micMur3.chr1 88376046 1544 + 114275543 I e saiBol1.JH378146 17268950 0 - 17725628 C e calJac3.chr17 73822529 0 + 74750902 C e cebCap1.NW_016107444v1 6357924 209 + 6778120 I e canFam3.chr33 2312458 58 - 31377067 I a score=146582.000000 s hg38.chr3_KI270934v1_alt 45377 74 + 163458 GGAACCTTTTTCCACAGGAACCTTTTTCCC------------------------------------------------TAGGAACCTTTTTCCCTAGGAAACTTTTTCCATAGGAAGCACCa s panTro5.chr3 2517598 74 - 202621043 GGAACCTTTTTCCCTAGGAACCTTTTTCCC------------------------------------------------TAAGAAACTTTTTCCCTAGGAAACTTTTTCCATAGGAAGCACCa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109312 74 - 190779 GGAACCTTTTTCCACAGGAACCTTTTTCCC------------------------------------------------TAGGAACCTTTTTCCCTAGGAAACTTTTTCCATAGGAAGCACCa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 58638 74 - 106623 GGAACCTTTTTCCACAGGAACCTTTTTCCC------------------------------------------------TAGGAAACTTTTTCCATAGGAAACTTTTTCCATAGGAAGCACCa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2833737 122 - 123690457 GGAACCTTTTTCCATAGGAACCTTTTTCCCTAGGAAACTTTTTCCATAGGAACCACCATCCCTTGGAACCTTTTTCCATAGGAACCTTTTTCCCTAGGAAACTTTTTCCATGGGAACCACCa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2330771 44 - 204787373 ------------------------------------------------------------------------------TAGAAAACTTTTTCCATAGGAAACTTTTTCCATAGGAACTGTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192396517 44 - 192460366 ------------------------------------------------------------------------------TAGAAAACTTTTTCCATAGGAAACTTTTTCCATAGGAACTGTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19135855 44 - 19675229 ------------------------------------------------------------------------------TAGAAAACTTTTTCCATAGGAAACTTTTTCCATAGGAACTGTCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16368917 44 - 16847902 ------------------------------------------------------------------------------TAGAAAACTTTTTCCATAGGAAACTTTTTCCATAGGAACTGTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91341824 35 + 91754291 ---------------------------------------------------------------------------------------TTTTCCATAGGAAACTTTGTCCATAGGAACTGTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1408007 44 + 1977891 ------------------------------------------------------------------------------TAGAAAACTTTTTCCATAGGAAACTTTTTCCATAGGAACTGTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7347040 44 - 7796314 ------------------------------------------------------------------------------TAGAAAACTTTTTCCATAGGAAACTTTTTCCATAGGAACTGTCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73822529 19 + 74750902 ----------------------------------------------------------------------------------------TTTCCATAGGAAACT---------------GGCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17268950 20 - 17725628 ---------------------------------------------------------------------------------------TTTTCCATAGGAAACT---------------GTCA i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 198812 15 + 608964 -----------------------------------------------------------------------------------------------------------CCATTGAAATTGTCa i otoGar3.GL873829 C 0 I 1 s dasNov3.JH569502 2690786 24 - 6579706 -------------------------------------------------------------------------------------------Ccat-------catgtttactggtcgcacaa i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14786582 16 - 22200726 I e mm10.chr16 32780079 573 + 98207768 I e aotNan1.NW_018503669v1 5240 144 + 69927 I e micMur3.chr1 88376046 1544 + 114275543 I e cebCap1.NW_016107444v1 6357924 209 + 6778120 I e canFam3.chr33 2312458 58 - 31377067 I a score=121399.000000 s hg38.chr3_KI270934v1_alt 45451 11 + 163458 ---tcccttggtaa s panTro5.chr3 2517672 11 - 202621043 ---tcccttggtaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109386 11 - 190779 ---tcccttggtaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 58712 11 - 106623 ---tcccttggtaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2833859 11 - 123690457 ---tcccttggtaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2330815 11 - 204787373 ---TCCCTTGGTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192396561 11 - 192460366 ---TCCCTTGGTAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19135899 11 - 19675229 ---TCCCTTGGTAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16368961 11 - 16847902 ---TCCCTTGGTAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91341859 11 + 91754291 ---TCCCTTGGTAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1408051 11 + 1977891 ---TCCCTTGGTAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7347084 11 - 7796314 ---TCCCATGGTAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73822548 11 + 74750902 ---TCCCTTGGTAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17268970 11 - 17725628 ---TCCCTTGGTAG i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 14786598 11 - 22200726 ---tcccttgatag i proCoq1.NW_012133858v1 I 16 C 0 s otoGar3.GL873829 198828 11 + 608964 ---tcccttggtag i otoGar3.GL873829 I 1 C 0 s dasNov3.JH569502 2690810 14 - 6579706 tattccttttggaa i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32780079 573 + 98207768 I e aotNan1.NW_018503669v1 5240 144 + 69927 I e micMur3.chr1 88376046 1544 + 114275543 I e cebCap1.NW_016107444v1 6357924 209 + 6778120 I e canFam3.chr33 2312458 58 - 31377067 I a score=688219.000000 s hg38.chr3_KI270934v1_alt 45462 74 + 163458 ggatgtgcagtagt--ttatttaaccagacc-ctacttctgaaac---gttact-------------------------attatccaccatgctgatctgaacgt s panTro5.chr3 2517683 74 - 202621043 ggatgtgcagtagt--ttatttaaccagact-ctacttctgaaac---gttact-------------------------attatccaccacgctgatctgaacgt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109397 74 - 190779 ggatgtgcagtagt--ttatttaaccagact-ctacttctgaaac---gttact-------------------------attatccaccacgctgatctgaacgt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 58723 77 - 106623 ggatgtgcagtagt--ttatttaaccagacc-ctacttctgaaacattgttact-------------------------attatccaccacgctgatctgaacgt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2833870 77 - 123690457 ggatgtgcagtagt--ttatttaaccagacc-ccacttctgaaatgttgttact-------------------------attatccaccacgctgatctgaatgt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2330826 74 - 204787373 GGATGTGC---AGT--TTATTTAACCCGACC-CCACTTCTGAAACGTTGTTACT-------------------------ATTATCCACCACGCTGATCTGAATAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192396572 74 - 192460366 GGATGTGC---AGT--TTATTTAACCCGACC-CCACTTCTGAAACGTTGTTACT-------------------------ATTATCCACCACGCTGATCTGAATAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19135910 74 - 19675229 GGATGTGC---AGT--TTATTTAACCCGACC-CCACTTCTGAAACGTTGTTACT-------------------------ATTATCCACCACGCTGATCTGAATAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16368972 74 - 16847902 GGATATGC---AGT--TTATTTAACCCCATC-CCACTTCTGAAACATTGTTACT-------------------------ATTATCCACTACGCTGATCTGAATAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91341870 74 + 91754291 GGATGTGC---AGT--TTATTTAACCCGACC-CCACTTCTGGAACGTTGTTACT-------------------------ATTACCCACCACGCTAATCTGAATAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1408062 74 + 1977891 GGATATGC---AGT--TTATTTAACCCGACC-CCACTTCTGAAACATTGTTACT-------------------------ATTATCCACCACGCTGATCTGAATAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7347095 74 - 7796314 GGATGTGC---AGT--TTATTTAACCCGACC-CCACTTCTGAAACGTTGTTACT-------------------------ATTATCCACCACGCTGATCTGAATAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73822559 75 + 74750902 CGATCCGCAGTAGT--TCATTTAACCAGACC-CCACTTCTGAAACATTGTTGCA---------------------------TTTCCACCATGCTGATCCGAATGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17268981 77 - 17725628 CGATATGCAGTAGT--TTATTTAACCAGACC-CCACTTCTGAAACGTTCTCACC-------------------------ATTCTCCAGCGCGCTGATCGGAATGT i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 14786609 77 - 22200726 ggatatatagtaac--ttatttaacaagacc-cctcttgttaaacattgttgct-------------------------attatcaaccgcgctgatctgaatat i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 198839 76 + 608964 gaatacacaa-aac--ttatttaacaagacc-cctcttgttaaacatggttgcc-------------------------atcatcaaccacgctgatctgaatat i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2312516 79 - 31377067 GGTTGCACAGTATTCCTTGTTTAACAAAACC-TCACCTATTAAACACTGttgct-------------------------attataaaccacgctgctctggacgt i canFam3.chr33 I 58 C 0 s dasNov3.JH569502 2690824 103 - 6579706 ggatatgtactaac--ttatttaaccagccctcctcctattacacattgttactctctccacccacccaccctggtttaattataaaccatgctaatctggacat i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32780079 573 + 98207768 I e aotNan1.NW_018503669v1 5240 144 + 69927 I e micMur3.chr1 88376046 1544 + 114275543 I e cebCap1.NW_016107444v1 6357924 209 + 6778120 I a score=601462.000000 s hg38.chr3_KI270934v1_alt 45536 83 + 163458 ccaggggcatatgtatctgtgcacttctccaattatttctcaggat--------aaaca----cccga-----------aaa-ggaattcgtggctgaaaaggtaCT s panTro5.chr3 2517757 83 - 202621043 ccaggggcatatgtatctgtgcacttctttaattatttctcaggat--------aaaca----cccga-----------aaa-ggaattcgtggctgaaaaggtatT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109471 83 - 190779 ccaggggcatatgtatctgtgcacttctttaattatttctcaggat--------aaaca----cccga-----------aaa-ggaattcgtggctgaaaaggtatT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 58800 83 - 106623 ccaggagcatatgtatttgtgcacttctctaattatttctcaggat--------aaaca----cccga-----------aaa-ggaattcgtggctgaaaaggtatT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2833947 83 - 123690457 ccaggggcatatgtatctgtgcacttctttacttatttctcaggat--------aaaca----cccaa-----------aaa-ggaattcgtggctgaaaaggtatT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2330900 83 - 204787373 GCAGGGGCATATGTATCTGTGCATCTCTCTAATTACTTCTCAGGAG--------AAACA----CCTGA-----------AAA-AGAATTCGTGGTTGAAAAGGTATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192396646 83 - 192460366 GCAGGGGCATATGTATCTGTGCATCTCTCTAATTACTTCTCAGGAG--------AAACA----CCTGA-----------AAA-AGAATTCGTGGTTGAAAAGGTATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19135984 83 - 19675229 GCAGGGGCATATGTATCTGTGCATCTCTCTAATTACTTCTCAGGAG--------AAACA----CCTGA-----------AAA-AGAATTCGTGGTTGAAAAGGTATT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16369046 79 - 16847902 GCAGGGGCATATGTATCTGTGCACCTCTC----TATTTCTCAGGAG--------AAACA----CCTGA-----------AAA-GGAATTCGTGGTTGAAAAGGTATT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91341944 79 + 91754291 GCAGGGGCATATGTATCTGTGCACCTCTC----TATTTCTCAGGAG--------AAACA----CCTGA-----------AAA-GGAATTCGTGGTTGAAAAGGTATT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1408136 83 + 1977891 GCAGGGGCATATGTATCTGTGCATCTCTCTAATTACTTCTCAGGAG--------AAACA----CCTGA-----------AAA-GGAATTCGTGGTTGAAAAGGTATT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7347169 82 - 7796314 GC-GGGGCATATGTATCTGCGCACCTCTCTAATTACTTCTCAGGAG--------AAACA----CCTGA-----------AAA-GGAATTCGTGGTTGAAAAGGTATT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73822634 45 + 74750902 CCAGGGACATACGTATC-GTGCACTTCTCTAGTCGTTTCTCAGGAG------------------------------------------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17269058 44 - 17725628 CCAGGGACGTATGTATC--TGCATGTCTCTGGTCGTTCCTCAGGAG------------------------------------------------------------- i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 14786686 84 - 22200726 ccaaggacatatgcatttgtgcacctttccaattatttctcagaat--------gatca----cctaa-----------aaatgaaattcttgagtgaaaatgtatT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 198915 95 + 608964 ccaaggacatacgtatttgtgcacttttccaattatttctcagaat--------gatca----ctgaaattcttgagtgaaatgaaattcttgagtggaaaggtatT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32780652 95 + 98207768 CTACGGATACAGGACTCTAGGCACTTGACCAGATGTTTCTCAGAAACATCTCATAAACACCTGCCTGA-----------AAC-TTGACTACCTGATGGAAAGGAATG i mm10.chr16 I 573 C 0 s canFam3.chr33 2312595 84 - 31377067 ccatgaacatacagatttgcatgcttttccaaggatttctcaggat--------aaatg----cctga-----------aaacagaattcccgattgaagaggtata i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2690927 70 - 6579706 ccacaaacatatgtattcgtgttcttttccaaatatttctgaggat--------taacc----cttga-----------aaatggaaCAAATT-------------- i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 5240 144 + 69927 I e micMur3.chr1 88376046 1544 + 114275543 I e cebCap1.NW_016107444v1 6357924 209 + 6778120 I a score=12292.000000 s hg38.chr3_KI270934v1_alt 45619 1 + 163458 G s panTro5.chr3 2517840 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109554 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 58883 1 - 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2834030 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2330983 1 - 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192396729 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19136067 1 - 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16369125 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91342023 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1408219 1 + 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7347251 1 - 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73822679 1 + 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17269102 1 - 17725628 G i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 5384 1 + 69927 G i aotNan1.NW_018503669v1 I 144 C 0 s proCoq1.NW_012133858v1 14786770 1 - 22200726 A i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 199010 1 + 608964 A i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32780747 1 + 98207768 A i mm10.chr16 C 0 C 0 s canFam3.chr33 2312679 1 - 31377067 g i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2690997 1 - 6579706 G i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88376046 1544 + 114275543 I e cebCap1.NW_016107444v1 6357924 209 + 6778120 I a score=4865494.000000 s hg38.chr3_KI270934v1_alt 45620 294 + 163458 ATTTAGTGTTCATCGGTTGCTTTCTGTGTTAATCTGTGTCCTTCCCGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAGATGCGATGGCTACAAGGGCTACGACCTGGTCTACAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTAGGGGCTACTGTGACCATGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCATAGGG--CTGTGGCCAGGAGGTGGAGGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACTGCAAGGGGTCCA--------------------------GGAA-- s panTro5.chr3 2517841 294 - 202621043 ATTTAGTGTTCATCGGTTGCTTCCTGTGTTAATCTGTGTCCTTCCCGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAGATGCGATGGCTACAAGGGCTACGACCTGGTCTACAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTAGGGGCTACTGTGACCATGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCATAGGG--CTGTGGCCAGGAGGTGGAGGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACTGCAAGGGGTCCA--------------------------GGAA-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109555 294 - 190779 ATTTAGTGTTCATCGGTTGCTTCCTGTGTTAATCTGTGTCCTTCCCGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAGATGCGATGGCTACAAGGGCTACGACCTGGTCTACAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTAGGGGCTACTGTGACCATGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCATAGGG--CTGTGGCCAGGAGGTGGAGGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACTGCAAGGGGTCCA--------------------------GGAA-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 58884 294 - 106623 ATTTAGTGTTCATCAGTTGCTTTCTGTGTTAATCTGTGTCCTTCCCGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAGATGCGATGGCTACAAGGGCTACGACCTGGTCTACAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTAGGGGCTACTGTGACCATGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCATAGGG--CTGTGGCCAGGAGGTGGAGGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACTGCAAGGGGTCCA--------------------------GGAA-- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2834031 294 - 123690457 ATTTAGTGTTCATCAGTTGCTTTCTGTGTTAATCTGTGTCCTTCCCGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAAATGCAATGGCTACAAGGGCTACGACCTGGTCTACAGCCCCCAGAGTGGCTTCACCTGCGTGTCCCCGTGCAGTAGGGGCTACTGTGACCATGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCATAGGG--CTGCGGCCAGGAGGTGGATGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACTGCAAGGGGTCCA--------------------------GGAA-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2330984 294 - 204787373 ATTTAGTGTTCATCAGTTGCTTTCTGTGTTAATCTATGTCCTTCCCGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAAATGCAATGGCTACAAGGGCTATGACCTGGTCTATAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTAGAGGCTACTGTGACCATGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCATAGGG--CTGCGGCCAGGAGGTGGATGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACCGCAAGGGGTCCA--------------------------GAAA-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192396730 294 - 192460366 ATTTAGTGTTCATCAGTTGCTTTCTGTGTTAATCTATGTCCTTCCCGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAAATGCAATGGCTACAAGGGCTATGACCTGGTCTATAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTAGAGGCTACTGTGACCATGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCATAGGG--CTGCGGCCAGGAGGTGGATGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACCGCAAGGGGTCCA--------------------------GAAA-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19136068 294 - 19675229 ATTTAGTGTTCATCAGTTGCTTTCTGTGTTAATCTATGTCCTTCCCGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAAATGCAATGGCTACAAGGGCTATGACCTGGTCTATAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTAGAGGCTACTGTGACCATGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCATAGGG--CTGCGGCCAGGAGGTGGATGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACTGCAAGGGGTCCA--------------------------GAAA-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16369126 294 - 16847902 ATTTAGTGTTCATCAGTTGCTTTGTGTGTTAATCTGTGTCCTTCCTGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAAATGCAATGGCTACAAGGGCTATGACCTGGTCTACAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTAGGGGCTACTGTGACCATGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCATAGGG--CTGCGGCCAGGAGGTGGATGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACCGCAAGGGGTCCA--------------------------GAAA-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91342024 294 + 91754291 CTTTAGTGTTCATCAGTTGCTTTCTGTGTTAACCTGTGTCCTTCCCGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCGAATGCAATGGCTACAAGGGCTATGACCTGGTCTACAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTAGGGGCTACTGTGACCATGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCATAGGG--CTTCGGCCAGGAGGTGGATGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACCGCAAGGGGCCCA--------------------------GAAA-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1408220 294 + 1977891 ATTTAGTGTTCATCAGTTGCTTTGTGTGTTAATCTGTGTCCTTCCCGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAAATGCAATGGCTACAAGGGCTATGACCTGGTCTACAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTAGGGGCTACTGTGACCATGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCATAGGG--CTGCGGCCAGGAGGTGGATGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACCGCAAGGGGTCCA--------------------------GAAA-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7347252 294 - 7796314 ATTGAGTGTTCATCAGTTGCTTTCTGTGTTAATCTGTGTCCTTCCCGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAAATGCAATGGCTACAAGGGCTATGACCTGGTCTACAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTAGGGGCTACTGTGACCCTGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGTTGCAGGTGCATAGGG--CTGCGGCCAGGAGGTGGATGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACCGCAAGGGGTCCA--------------------------GAAA-- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73822680 291 + 74750902 ATTTTGTGTCCATCGGTTGCTTTCTGTGTTCACCTGTGTTCTTCCTGACAGTGAACGTGAGCATGCTGAGGACTTACTTCAAATGCAGTGGCTACGAGGGCTACAACCTGGTTTACGGCCCCCAGAGCGGCTTCACCTGTGTGTCCCCGTGCAGTAGGGGCTACTGTGACCACGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCGTAGGG--CCACGGCCAGGAGGCGGATG--AGTGCTGGGGAACTCAAGCTGGGCA-AGACCCTGCAA-AGGCCCA--------------------------GGAA-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17269103 291 - 17725628 ATTTCCTGTTCACCGGCTGCTCTCTGTGTTCACCTGTGTTCCTCCTGACAGTGAGCGTGAGCATGCTGAGGGCTTACTTCACATGCAGTGGCTATGAGGGCTACGACCTGGTTTACGACCCCCAGAGCGGCTTCACCTGTGTGTCCCCGTGCAGTAGGGGCTACTGTGACCATGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCGTAGGG--CCACGGCCAGGAGGTGGATG--AGTGCTGGGGAGCCCAAGCTGGGCC-AGACCCTGCAA-GGGCCCA--------------------------GGAA-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6358133 290 + 6778120 ATTTCGTGTTCATCGGTTGCTTTCTGTGTTCACCTGTGTTCCTTCTGACAGTGAACGTGAGCATGCTGAGGGCTTACTTCACATGCAGTGGCTACAAGGGCTATGAGCTGGTTTACGACCCCCAGAGCGGTTTCACCTGTGTGTCCCCGTGCAGTAGGGGCTACTGTGACCAAGGAGGCCAGTGCCAGCACCTACCCAGCGGGCCCCACTGCAGGTGCGTAGGG--CCACGGCCAGGA-GTGGATG--AGTGCTGGGGAGCCCAAGCTGGGCA-AGACCCTGCAA-GGGCCCA--------------------------GGAA-- i cebCap1.NW_016107444v1 I 209 C 0 s aotNan1.NW_018503669v1 5385 290 + 69927 ATTTTGTGTTCATTGGCTGCTTTCTGTGTTCGCCTGTGTTCGTCCTAACAGTGAACGTGAGCATGCTGAGGGCTTACTTCAAATGCAGTGGCTACGAGGGCTACGACCTGGTTTACGGCCCCCAGAGCGGCTTCACCTGTGTGTCCCCGTGCAGTCGGGGCTACTGTGACCACGGAGGCCAGTGCCAGCACCTGCCCAGCGGGCCCCGCTGCAGGTGTGTAGGG--CCACGGCCAGGAGGTGGATG--AGTGCTGGGGAGCCCAAGCT-GGCA-AGACACTGCAA-AGGCCCA--------------------------GGAA-- i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88377590 293 + 114275543 atTTAGTGCTAATCAGTTGCTTTCCATGTTAATCCGTGTCCTCCCTGACAGTGAACTTGAGCACGCTGAAGACTTACTTCAGCTGTAGTGGCTACAAGGGCTACCACATGGTCTACAGCCCCGAGAGCGGCCTCACCTGCGTGTCCCCGTGCAGTGAGGGCTTCTGTGATCACGGTGGCCAGTGCCAGCACCTGCCGGATGGGCCCCGCTGCAGGTGCGTGGGG--CCGGGTGCAGGAGGGGAAAGACAGTGA-GGGGAATCCAAACTGGGCA-AGACTCTGCTGGCGGTCCA--------------------------GGAA-- i micMur3.chr1 I 1544 C 0 s proCoq1.NW_012133858v1 14786771 294 - 22200726 ATTTAGTGTTAATCAGTTGCTTTCCATGTTAATCTGTGTCCTACCTGACAGTGAACTTGAGCACGCTGAAGACGTACTTCAGCTGCAGTGGCTACAAGGGCTACCACATGGTCTACAGCCCCCAGAGCGGCCTCACCTGCGTGTCCCCGTGCAGTGAAGGCTACTGCGATCACGGAGGCCAGTGCCAGCACCTGCCGGACGGGCCCCGCTGCAGGTGCGTAGGG--CGGGGCGCAGGAGGGGAAAGACAGTGCTGGGGAATCCAAACTGGGCA-AGACTCTGCTAGCGGTCCG--------------------------GGAA-- i proCoq1.NW_012133858v1 C 0 I 624 s otoGar3.GL873829 199011 280 + 608964 TTCTAGTGTTAATCCATTGCTTTCCGTGTCCATCCGTGT----CCTGACAGTGAACATAAGTACATTGAAGACTTACTTCAACTGCAGTGGCTACAAGGGCTACTACCTGTCCTACAGCCCCCAGCGCGGCCTCACCTGCGTGTCGCCGTGCAGTGAGGGCTTCTGTGATCACGGAGGCCAGTGCCAGCACCTGCCGGATGGGCCCCGCTGCAGGTGCTTAGGG--CCGGGCGCGGGACGTGGGAGGCAGCGC----------TAGCTGGACC-AGGCTCTGCTAGCGGTCCG--------------------------GGAA-- i otoGar3.GL873829 C 0 I 18 s mm10.chr16 32780748 289 + 98207768 ATTTACC-TCTGTGGTTTGCTTACTCCATGTATCCTTTTCCTGCCT-ACAGTGAACCTAAGTATGCTGGAGGAGTACTTCACATGTGATGGCTACAAAGGCTACCACCTGGTCTACAGCCCACAGGATGGTGTCACCTGTGTGTCCCCATGTAGTGAGGGCTACTGTCACAATGGAGGCCAATGCAAGCACCTGCCAGATGGGCCCCAATGCAGGTGGGTAGGGGCCTGGGGCAGGAAAGCAA-----AGCACTGGGGAACTCAGATTTGACG-AGACACCACAGTAGGCCCA--------------------------GGAA-- i mm10.chr16 C 0 I 28 s canFam3.chr33 2312680 285 - 31377067 aTCCGGTGCT-ATTGATTGCTTTCCATGTTCATCTGTGT----CCTGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAAATGCAACAGCTACAAGGACTACCGCCTGGTCTACAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTGAGGGCTATTGTAAGCACGGAGGCCAGTGTCAGCACCTGCCCCAAGGGCCCCGCTGCAGGTGAGTCGGG--GAGAGGGCAGGACGAG-----CAGAGCCGGAGACTCCAGGCCGGGCACAGATACCGCAAGGGGCGTA--------------------------GAAA-- i canFam3.chr33 C 0 I 28 s dasNov3.JH569502 2690998 308 - 6579706 ATTTGGTGCCAGCCAGTTGATTTCCATGTTAATCTGTGTCCTGCCTGGCAGTGAACGTGAGCACACTGGAGACTTACTTCAGATGCAGTGGCTACAAGGGGTACCGCCTGGCCTACAGCCCGCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGCACGGGCTTCTGTAAGCACGGAGGCCGGTGCCAGCACCTGCCCACTGGGGCCCGCTGCAGGTGAGGGGGG--CAGTG-TCAGGAGGTGGG----AGGACTGTGG---------TGGGCA-AAATACGACAAGGGGCCAGTTATGCCATGGTTCCCCATGGCAAGTGAAAAC i dasNov3.JH569502 C 0 C 0 a score=6821.000000 s hg38.chr3_KI270934v1_alt 45914 1 + 163458 -T s panTro5.chr3 2518135 1 - 202621043 -T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109849 1 - 190779 -T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 59178 1 - 106623 -T i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2834325 1 - 123690457 -T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2331278 1 - 204787373 -T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192397024 1 - 192460366 -T i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19136362 1 - 19675229 -T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16369420 1 - 16847902 -T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91342318 1 + 91754291 -T i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1408514 1 + 1977891 -T i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7347546 1 - 7796314 -T i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73822971 1 + 74750902 -T i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17269394 1 - 17725628 -T i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6358423 1 + 6778120 -T i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 5675 1 + 69927 -T i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88377883 1 + 114275543 -T i micMur3.chr1 C 0 I 784 s otoGar3.GL873829 199309 1 + 608964 -T i otoGar3.GL873829 I 18 C 0 s canFam3.chr33 2312993 1 - 31377067 -T i canFam3.chr33 I 28 C 0 s dasNov3.JH569502 2691306 1 - 6579706 A- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781037 28 + 98207768 I a score=910912.000000 s hg38.chr3_KI270934v1_alt 45915 80 + 163458 TAGGATGGCTC--------------GAGAGATCAGAGACCAGGGAAGAGAGGACAGTGG--AAAAGGAGAGT-TGtgagtgcctgctctgtgtggag s panTro5.chr3 2518136 80 - 202621043 TAGGATGGCTC--------------GAGAGATCAGAGACCAGGGAAGAGAGGACAGTGG--AAAAGGAGAGT-TGTGAGTGCCTGCTCTGTGTGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109850 80 - 190779 TAGGATGGCTC--------------GAGAGATCAGAGACCAGGGAAGAGAGGACAGTGG--AAAAGGAGAGT-TGTGAGTGCCTGCTCTGTGTGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 59179 80 - 106623 TAGGATGGCTC--------------GAGAGATCAGAGACCAGGGAAGAGAGGACAGTGG--AAAAGGAGAGT-TGTGAGTGCCTGCTCTGTGTGGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2834326 92 - 123690457 TAGGATGGCTCCCTTTGTAAA--GAGagagatcagagaccagggaagaggggacagtgg--aaaaggAGAGT-TGTGAGTGCCTGCTGTGTGTGGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2331279 92 - 204787373 TAGGATGGCTCCCTTTGTAAC--GAGAAAGATCGGAGACCTGGGAAGAGGGGACAGTGG--GAAGGGAGAGT-TGTGAGTGCCTGCTCTGTGTGGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192397025 92 - 192460366 TAGGATGGCTCCCTTTGTAAC--GAGAAAGATCGGAGACCTGGGAAGAGGGGACAGTGG--GAAGGGAGAGT-TGTGAGTGCCTGCTCTGTGTGGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19136363 92 - 19675229 TAGGATGGCTCCCTTTGTAAC--GAGAAAGATCGGAGACCTGGGAAGAGGGGACAGTGG--GAAGGGAGAGT-TGTGAGTGCCTGCTCTGTGTGGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16369421 92 - 16847902 TAGGATGGCTCCCTTTGTAAC--GAGAAAGATCGGAGACCTGGGAAGAGGGGACAGTGG--GAAGGGAGAGT-TGTGAGTGCCTGCTCTGTGTGGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91342319 92 + 91754291 TAGGATGGCTCCCTTTGTAAC--GAGAAAGATCGGAGACCAGGGAAGAGGGGACAGTGG--GAAGGGAGAGT-TGTGAGTGCCTGCTCTGTGTGGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1408515 92 + 1977891 TAGGATGGCTCCCTTTGTAAC--GAGAAAGATCGGAGACCAGGGAAGAAGGGACAGTGG--GAAAGGAGAGT-TGTGAGTGCCTGCCCTGTGTGGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7347547 92 - 7796314 TAGGATGGCTCCCTTTGTAAT--GAGAAAGATTGGAGACCAGGGAAGAGGGGACAGTGG--GAAAGGAGAGT-TGTGAGTGCCTGCTCTGTGTGGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73822972 96 + 74750902 TAGGATGGCTCCCTTTGAGATTGGAGAGAAACCAGAGACCAGGGAAGAGGGGACAGTGGAAGAAAGGAGGGT-TGTGAGTGCCTGCTCTGTGTGGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17269395 96 - 17725628 TAGGATGGCTCCCTTTGAGATCGGAGAGAAATCGGAGACCAGGGAAGAGGGGACAGTGGAAGAAAGGAGGGT-TGTGAGTGCCTGCTTTGTGTGGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6358424 95 + 6778120 TAGGATGGCTCCCTTTGAGATCGGAGAGAAATCGGAGGCCAGGGAAGA-GGGACAGTGGAGAAAAGGCGGGT-TGTGAGTGCCTGCTTTGTGTGGAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 5676 96 + 69927 TACGATGGCTCCCTTTGAGATCGGAGAGAATTCGGAGACCAGGGAAGAGGGGACAGTGGAAAAAAGGAGGGC-TGTGAGTGCCTGCTCTGTGTGGAG i aotNan1.NW_018503669v1 C 0 I 27 s otoGar3.GL873829 199310 79 + 608964 GAGGGTGGCTCCCCTTGTAAT--TAGCGAGATCAGGGGCCAGG----------CAATG---AAAAGGAACTG-TGTGAGTGCCTACTTTGTGGAG-- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32781065 85 + 98207768 TGGGATGACTCCCC-----AGTGGCTGGAGGGTGAAAAGCAGAGAA-AGTGGGCAGTAG--GAGAAGGG----TGTGTGGCACTCCTCTGCATGGAG i mm10.chr16 I 28 C 0 s canFam3.chr33 2312994 85 - 31377067 TAGGATGGTTCTCTGATGACT----CAGAGAGCAGGGATCAGAGAAAAAGGGACCATAG--AAAAGATG----TGTGAGCACTTACTCTGTGTGG-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2691307 85 - 6579706 TAAGATGGGTCTCTGT-------AACTGCGAACAGGGATCAGAGAAAAGCAGACAAAAG--GGAAAGATGGTGCGGGAATGCCTACTCTGAGTT--- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e micMur3.chr1 88377884 784 + 114275543 I a score=260046.000000 s hg38.chr3_KI270934v1_alt 45995 52 + 163458 aataaaggcgctatattac---a-aactctgaaacccaaaagagccatagg-ggggc s panTro5.chr3 2518216 52 - 202621043 AATAAAGGCGCTATATTAC---A-AACTCTGAAACCCAAAAGAGCCATAGG-GGGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109930 52 - 190779 AATAAAGGCGCTATATTAC---A-AACTCTGAAACCCAAAAGAGCCATAGG-GGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 59259 52 - 106623 AATAAAGGCGCTATATTAC---A-AACTCTGAAACCCAAAAGAGCCATAGG-GGGGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2834418 52 - 123690457 AATAAAGGCGCTATATTAC---A-AACTCTGAAACCCAAAGGAGCCACAAG-GGGCa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2331371 43 - 204787373 AA---------TATATTAC---A-AACTCTGAAACCCAAAGGAGCCACAGG-GGGTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192397117 43 - 192460366 AA---------TATATTAC---A-AACTCTGAAACCCAAAGGAGCCACAGG-GGGTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19136455 43 - 19675229 AA---------TATATTAC---A-AACTCTGAAACCCAAAGGAGCCAcagg-gggta i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16369513 43 - 16847902 AA---------TATATTAC---A-AACTCTGAAACCCAAAGGAGCCAcagg-gggta i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91342411 43 + 91754291 AA---------TATATTAC---A-AACTCTGAAACCCAAAGGAGCCACAGG-GGGTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1408607 43 + 1977891 AA---------TATATTAC---A-AACTCTGAAACCCAAAGGAGCCAcagg-gggta i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7347639 52 - 7796314 AATAAAGGCGCTATATTAC---A-AACTCTGAAACCCAAAGGAGCCAcagg-gggta i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73823068 49 + 74750902 AATAAGGGCGCTATATTAC-------CTCGGAGGCCCAAAGGAGCCACagttgggt- i calJac3.chr17 C 0 I 2 s saiBol1.JH378146 17269491 49 - 17725628 AAGAAAGGCACTATACCAC-------CTCTGAGACCCAAAGGAGCCACAGTGGGGC- i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 6358519 48 + 6778120 AAGAAAGGTGCTATACTAC-------CTCTGAGACCCAgaggagccacagc-gggt- i cebCap1.NW_016107444v1 C 0 I 1 s otoGar3.GL873829 199389 23 + 608964 ---------------------------------AATAAaacgaaccacaag-gtggg i otoGar3.GL873829 C 0 I 2 s mm10.chr16 32781150 48 + 98207768 GAGAAAGACA-TGCATTGC-------TTCTGAAAGTCAAGCTAGTCACAAA-AGGTT i mm10.chr16 C 0 I 2 s canFam3.chr33 2313079 49 - 31377067 -ATAAAGATGCTGCATGACTTCT-AACACTGACACTT-----AGCTTCTGG-GTAGG i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 2691392 43 - 6579706 ----------CCATGCTAT---GTGaccatgacccttgaacaagtcacagg-gtatt i dasNov3.JH569502 C 0 I 1 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e aotNan1.NW_018503669v1 5772 27 + 69927 I e micMur3.chr1 88377884 784 + 114275543 I a score=603254.000000 s hg38.chr3_KI270934v1_alt 46047 56 + 163458 ttagaactatttcgaagatgagaaa-actgcagcttagagatgacaaggaacctgcc s panTro5.chr3 2518268 56 - 202621043 TTAGAAccatttcgaagatgagaaa-actgcagcttagagatgacaaggaacctgcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109982 56 - 190779 TTAGAAccatttcgaagatgagaaa-actgcagcttagagatgacaaggaacctgcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 59311 56 - 106623 TTAGAAccatttcgaagatgagaaa-actgcagcttagagatgacaaggaacctgcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2834470 56 - 123690457 ttagagccattttgaagatgagaaa-actgcggcttagagatgacaaggaagctgcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2331414 56 - 204787373 CTGAAAccatttcgaagatgagaaa-actgcagcttaaagatgaccaggaacttgcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192397160 56 - 192460366 TTGAAAccatttcgaagatgagaaa-actgcagcttaaagatgaccaggaacttgcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19136498 56 - 19675229 ttgaaaccatttcgaagatgagaaa-actgcagcttaaagatgaccaggaacttgcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16369556 56 - 16847902 ttgaaaccatttcgaagatgagaaa-actgcagcttaaagatgaccaggaacttgcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91342454 56 + 91754291 CTGAAAccatttcgaagatgagaaa-actgcagcttaaagatgacaaggaacttgcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1408650 56 + 1977891 ttgaaaccatttcgaagatgagaaa-actgcagcttaaagatgaccaggaacttgcc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7347691 56 - 7796314 ttgaaaccatttcgaagatgagaaa-actgcagcttaaagatgacaaggaacttgcc i colAng1.NW_012118932v1 C 0 M 875 s calJac3.chr17 73823119 53 + 74750902 ttagaaccatttcgaagatgagaaa-atggcagctgagagat---aaggaaactgcc i calJac3.chr17 I 2 C 0 s saiBol1.JH378146 17269541 56 - 17725628 CTAGAACCATTTCCAAGATGAGAAC-ATGGCAGCTGAGAGCTGGGAAGGAAACTACC i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 6358568 56 + 6778120 ttagaaccacttcaaagatgagaaa-atggcagctgagagatgagaaggaaactgcc i cebCap1.NW_016107444v1 I 1 C 0 s aotNan1.NW_018503669v1 5799 55 + 69927 TTAGAACCACTTCGAAGATGAGAAA-ATGGCAGCTCGGAGATGAGAAGGAAGCTG-C i aotNan1.NW_018503669v1 I 27 C 0 s otoGar3.GL873829 199414 56 + 608964 ttaagaccgtgttgaaggtgagaaa-actgcagcttagtgatgacaaggaacttgtc i otoGar3.GL873829 I 2 C 0 s mm10.chr16 32781200 52 + 98207768 -TTCAACCATTCCAGACTTGGGGAATACTGCATTGAAGAGA----GAGGAGGCTCCA i mm10.chr16 I 2 I 1 s canFam3.chr33 2313130 40 - 31377067 GTATGACCCTTTTAAAGAAGAGGTA-----------------GGTAATGAATCTGCC i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 2691436 56 - 6579706 ttttgaccattttaaagatgagaaa-actgtagattggagaggctaagtcagctgtc i dasNov3.JH569502 I 1 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e micMur3.chr1 88377884 784 + 114275543 I a score=284419.000000 s hg38.chr3_KI270934v1_alt 46103 30 + 163458 -ccaggacgcagtaggttaagcagcagggca s panTro5.chr3 2518324 30 - 202621043 -ccaggacgcagtaggttaagcagcagggca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110038 30 - 190779 -ccaggacgcagtaggttaagcagcagggca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 59367 30 - 106623 -ccaggacgcagtaggttaagcagcagggca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2834526 30 - 123690457 -ctgggatgcagcaggttaagcagcagggcg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2331470 30 - 204787373 -cggggagccagtaggttaagcagcagggca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192397216 30 - 192460366 -cggggagccagtaggttaagcagcagggca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19136554 30 - 19675229 -cggggagccagtaggttaagcagcagggca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16369612 30 - 16847902 -cggggagccagtaggttaagcagcagggca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91342510 30 + 91754291 -cggggagccagtaggttaagcagcagggca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1408706 30 + 1977891 -cggggagccagtaggttaagcagcagggca i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73823172 29 + 74750902 -ccggcacccagtcggttaaa-agcagggta i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17269597 29 - 17725628 -CGAGGGCCCAGTAGGTTAAG-AGCAGGGTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6358624 29 + 6778120 -cggggacccagtaggttaag-agcagggta i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 5854 29 + 69927 -CGGGGGCCCAGTAGGTTAAG-AGCAGGGTA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 199470 30 + 608964 -caaggtaccagcaagttaagttgcagcgtt i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32781253 30 + 98207768 -TAGGCACCCAGGAAGTAAAATACCAGGGTA i mm10.chr16 I 1 I 363 s canFam3.chr33 2313170 30 - 31377067 -CAGGTAGCCAGGAGGTTAAATAACAGAACA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2691492 31 - 6579706 caagatacccaagaagttaaatagcagggca i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e micMur3.chr1 88377884 784 + 114275543 I e colAng1.NW_012118932v1 7347747 875 - 7796314 M a score=212652.000000 s hg38.chr3_KI270934v1_alt 46133 17 + 163458 tggttt-ccaaagccaaa s panTro5.chr3 2518354 17 - 202621043 tggttt-ccaaAGCCAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110068 17 - 190779 tggttt-ccaaAGCCAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 59397 17 - 106623 tggttt-ccaaAGCCAAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2834556 17 - 123690457 tggttt-ccaaAGCCAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2331500 17 - 204787373 tggttt-ccaaagccaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192397246 17 - 192460366 tggttt-ccaaagccaaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19136584 17 - 19675229 tggttt-ccaaAGCCAAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16369642 17 - 16847902 tggttt-ccaaAGCCAAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91342540 17 + 91754291 tggttt-ccaaagccaaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1408736 17 + 1977891 tggttt-ccaaAGCCAAA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73823201 17 + 74750902 tggttt-ccaaAGCCAAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17269626 17 - 17725628 TGGTTT-CTAAAGCCAAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6358653 17 + 6778120 tggttt-ccaaAGCCAAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 5883 16 + 69927 C-GCTT-CCAAAGCCAGA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 199500 18 + 608964 tggtttcccaaagccaaa i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2313200 17 - 31377067 TGGGTT-CCAAAGGCAAA i canFam3.chr33 C 0 I 403 s dasNov3.JH569502 2691523 17 - 6579706 tggctt-ccaaagccaaa i dasNov3.JH569502 C 0 I 212 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e micMur3.chr1 88377884 784 + 114275543 I e colAng1.NW_012118932v1 7347747 875 - 7796314 M a score=-7767.000000 s hg38.chr3_KI270934v1_alt 46150 15 + 163458 cattttttatattt-t s panTro5.chr3 2518371 15 - 202621043 CAttttttatattt-t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110085 15 - 190779 CAttttttatattt-t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 59414 15 - 106623 CAttttttatattt-t i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2834573 15 - 123690457 CAttttttatattt-t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2331517 15 - 204787373 cattttTTATTTTTT- i rheMac8.chr2 C 0 I 1498 s macFas5.chr2 192397263 7 - 192460366 cattttT--------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19136601 7 - 19675229 CAttttt--------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16369659 13 - 16847902 CAttttttatttt--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91342557 14 + 91754291 cattttttattttt-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1408753 14 + 1977891 CAttttttattttt-- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73823218 10 + 74750902 Ctttttt---att--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17269643 9 - 17725628 Ctttttt----tt--- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6358670 10 + 6778120 Ctttttt---att--- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 5899 9 + 69927 Cttattt----tt--- i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 199518 1 + 608964 c--------------- i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e micMur3.chr1 88377884 784 + 114275543 I e dasNov3.JH569502 2691540 212 - 6579706 I e canFam3.chr33 2313217 403 - 31377067 I e colAng1.NW_012118932v1 7347747 875 - 7796314 M a score=147610.000000 s hg38.chr3_KI270934v1_alt 46165 24 + 163458 tat---gttttgagatggagtgtcatt s panTro5.chr3 2518386 24 - 202621043 tat---gttttgagatggagtgtcatt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110100 24 - 190779 tat---gttttgagatggagtgtcatt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 59429 24 - 106623 tat---gttttgagatggagtgtcatt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2834588 24 - 123690457 tat---gttttgagatggagtgtcatt i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192397270 24 - 192460366 TAT---TTTTTGAGATGGAGTGTCATT i macFas5.chr2 C 0 M 425 s macNem1.NW_012014355v1 19136608 24 - 19675229 tat---tttttgagatggagtgtcatt i macNem1.NW_012014355v1 C 0 I 1 s cerAty1.NW_012004056v1 16369672 24 - 16847902 tat---tttttgagatggagtgtcatt i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 91342571 24 + 91754291 tat---tttttgagatggagtgtcatt i chlSab2.chr15 C 0 I 1 s manLeu1.NW_012102020v1 1408767 24 + 1977891 tat---tttttgagatggagtgtcatt i manLeu1.NW_012102020v1 C 0 I 1 s calJac3.chr17 73823228 24 + 74750902 ttt---tatttgagactgagtatctct i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 17269652 24 - 17725628 tgt---tttttgagactgagtatctct i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 6358680 27 + 6778120 ttttaatttttgagactgagtatctct i cebCap1.NW_016107444v1 C 0 I 1 s aotNan1.NW_018503669v1 5908 24 + 69927 tat---tttttgagactgagtatctct i aotNan1.NW_018503669v1 C 0 I 1 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e micMur3.chr1 88377884 784 + 114275543 I e dasNov3.JH569502 2691540 212 - 6579706 I e canFam3.chr33 2313217 403 - 31377067 I e otoGar3.GL873829 199519 0 + 608964 C e colAng1.NW_012118932v1 7347747 875 - 7796314 M e rheMac8.chr2 2331532 1498 - 204787373 I a score=1354950.000000 s hg38.chr3_KI270934v1_alt 46189 245 + 163458 tgtcgcccaggctggagtgcagtggtgcgttctcggctcactgcaacgtccttctcccgcgttcaagcgattctcctgcctcagcctcccgagtagttgggactacaggcacgcaccaccacgcccagctgatttttgca----------------------------tttttagtagagac-ggggtttcgccatgttgg-tcaggctggtctcgaactcctgacctcaggtgatccgtccaccttggcctcccaaagtgctgagattacaggc s panTro5.chr3 2518410 245 - 202621043 tgtcgcccaggctggagtgcagtggtgcgttctcggctcactgcaacgtccttctcccgcgttcaagcgattctcctgcctcagcctcccgagtagttgggactacaggcacgcaccaccacgcccagctgatttttgca----------------------------tttttagtagagac-ggggtttcgccatgttgg-tcaggctggtctcgaactcctgacctcaggtgatccgtccaccttggcctcccaaagtgctgagattacaggc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110124 245 - 190779 tgtcgcccaggctggagtgcagtggtgcgttctcggctcactgcaacgtccttctcccgcgttcaagcgattctcctgcctcagcctcccgagtagttgggactacaggcacgcaccaccacgcccagctgatttttgca----------------------------tttttagtagagac-ggggtttcgccatgttgg-tcaggctggtctcgaactcctgacctcaggtgatccgtccaccttggcctcccaaagtgctgagattacaggc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 59453 245 - 106623 tgtcgcccaggctggagtgcagtggtgcgttctcggctcactgcaacgtccttctcccgcgttcaagcgattctcctgcctcagcctcccgagtagttgcgattacaggcacgcaccaccacgccctgctgatttttgca----------------------------tttttagtagagac-ggggtttcgccatgttgg-tcaggctggtctcgaactcctgacctcaggtgatccgtccaccttggtctcccaaagtgctgagattacaggc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2834612 245 - 123690457 tgtcgcccaggctggagtgcagtggtgcgttctcggctcactgccacgtccttctcccgagttcaagcgattctcttgcctcagcctcccaagtagttgggactacaggcatgcaccaccacgcccagctgatttttgca----------------------------tttttagtagagat-ggggtttcgccatgttgg-tcaggctggtctcgaactcctgacctcaggtgatccgtccaccttggcctcccaaagtgctgagattacaggc i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19136633 245 - 19675229 cgtcgcccaggctggagtgcagtggcgtgatctcgactcactgcaacctccacctcccgggttcacgccattctcctgcctcagcctcccgagtagctgtgactacaggcgcgcaccaccacacccagctgatttttgta----------------------------tttttagtagaaac-aaggtttcgccatgttgg-ccaggctggtctcaaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggattacaggc i macNem1.NW_012014355v1 I 1 C 0 s cerAty1.NW_012004056v1 16369697 244 - 16847902 cgtcgcccgggctggagtgcagtggtgcattctcg-ctcactgcaacctccacctcccgggttcacgccattctcctgcctcagcctcccgagtagctgtgactacaggcgcccgccaccacacccagctgatttttgta----------------------------tttttagtagaaac-aaggtttcgccatgttgg-ccaggctggtctcaaacccctgacctcaggtgatccgcccacctcagcctcccaaagtgctgacattacaggc i cerAty1.NW_012004056v1 I 1 C 0 s chlSab2.chr15 91342596 243 + 91754291 cgtcgcccaggctggagtgcaatggtgcgttctcg-ctcactgcaacctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgtgactacaggcgcgcaccaccacacccagctgatttttgta----------------------------tttttagtagaaac-aaggtttcgccatgttgg-ccaggctggtctcaaact-ctgacctcaggtgatccgcccacctcagccttccaaagtgctgagatttcaggc i chlSab2.chr15 I 1 C 0 s manLeu1.NW_012102020v1 1408792 244 + 1977891 cgtcgcccgggctggagtgcagtggtgcattctcg-ctcactgcaacctccgcctcccgggttcatgccattctcctgcctcagcctcccgagtagctgtgactacaggcgcgcaccaccacacccagttgatttttgta----------------------------tttttagtagaaac-aaggtttcgccatgttgg-ccaggctggtctcaaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgacattacaggc i manLeu1.NW_012102020v1 I 1 C 0 s calJac3.chr17 73823253 247 + 74750902 ggttacccaggctggagtgcagtggtgcattctcagctcacagcaacctctgcctcccgggttcaagcgattcttctgcctccacctccccagtagctgagatgataggtgcacgccaccacacctggctaacttttgta----------------------------tttttagtagagatgggggtttcaccatattggttcaggctggtcttgaactcccaacctcaggtgatccacccgccttggcctcccaaagtgctgggattacaggt i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17269677 267 - 17725628 tgtcacccaggctggagtgcagtggtgtgttctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgcctccacctccccagtagctgggattacaggtgcgtgccaccacgc----ctaatttttgtatttttgttttttgttttttgtttttttgtttttagtagaaac-ggggtttcaccatgttga-ccaggatggtcttgatctcttgacctc--gtgatccacccgcctcggcctcccaaagtgctgggattacaggc i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 6358708 247 + 6778120 tgccacccaggctggagtgcagtgttgtgttctcagctcactgcaacctctgcctcctgggttcaagcaattctcctgcctccacctccccaggagctgggattacaggtgcgcgccaccacgcctgactagtatttgta----------------------------tttttagtagagacgggggtttcaccatgttggttcaggctggtcttgaactcccaacctcaggtgatccgcccaccttggcctcccaaagtgctgggattacaggc i cebCap1.NW_016107444v1 I 1 I 16 s aotNan1.NW_018503669v1 5933 246 + 69927 tgtcacccaggctggagtgcagtggtgcgttctcagctcactgcaacctctgcctcccgggtgcaagtgattctcctccctcagcctccccagtagctgggattacaggtgcatgccaccatgcctggctaatttttgta----------------------------tttttagtagagat-ggggtttcaccatgttggttcaggctggtcttgaactcctgacctcaggtgatctagccgccttggcctcccaaagtgctgggattacaggc i aotNan1.NW_018503669v1 I 1 C 0 s otoGar3.GL873829 199519 42 + 608964 ------------------------------------------------tctttcccccaattt----tgcttctgctGTCTC--------------------CTGTGGGCGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------- i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e micMur3.chr1 88377884 784 + 114275543 I e dasNov3.JH569502 2691540 212 - 6579706 I e canFam3.chr33 2313217 403 - 31377067 I e colAng1.NW_012118932v1 7347747 875 - 7796314 M e macFas5.chr2 192397294 425 - 192460366 M e rheMac8.chr2 2331532 1498 - 204787373 I a score=4246.000000 s hg38.chr3_KI270934v1_alt 46434 1 + 163458 g s panTro5.chr3 2518655 1 - 202621043 g i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110369 1 - 190779 g i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 59698 1 - 106623 g i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2834857 1 - 123690457 g i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19136878 1 - 19675229 g i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16369941 1 - 16847902 g i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91342839 1 + 91754291 g i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409036 1 + 1977891 g i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73823500 1 + 74750902 g i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17269944 1 - 17725628 t i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 6179 1 + 69927 g i aotNan1.NW_018503669v1 C 0 I 15 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e micMur3.chr1 88377884 784 + 114275543 I e dasNov3.JH569502 2691540 212 - 6579706 I e cebCap1.NW_016107444v1 6358955 16 + 6778120 I e canFam3.chr33 2313217 403 - 31377067 I e otoGar3.GL873829 199561 0 + 608964 C e colAng1.NW_012118932v1 7347747 875 - 7796314 M e macFas5.chr2 192397294 425 - 192460366 M e rheMac8.chr2 2331532 1498 - 204787373 I a score=4145.000000 s hg38.chr3_KI270934v1_alt 46435 6 + 163458 tgagcc s panTro5.chr3 2518656 6 - 202621043 tgagcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110370 6 - 190779 tgagcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 59699 6 - 106623 tgagcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2834858 6 - 123690457 tgagcc i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19136879 3 - 19675229 cga--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16369942 3 - 16847902 tga--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91342840 3 + 91754291 tga--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409037 3 + 1977891 tga--- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73823501 6 + 74750902 ggaacc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17269945 6 - 17725628 tgagcc i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e aotNan1.NW_018503669v1 6180 15 + 69927 I e micMur3.chr1 88377884 784 + 114275543 I e dasNov3.JH569502 2691540 212 - 6579706 I e cebCap1.NW_016107444v1 6358955 16 + 6778120 I e canFam3.chr33 2313217 403 - 31377067 I e otoGar3.GL873829 199561 0 + 608964 C e colAng1.NW_012118932v1 7347747 875 - 7796314 M e macFas5.chr2 192397294 425 - 192460366 M e rheMac8.chr2 2331532 1498 - 204787373 I a score=18215.000000 s hg38.chr3_KI270934v1_alt 46441 8 + 163458 accgcgcc s panTro5.chr3 2518662 8 - 202621043 accgcgcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110376 8 - 190779 accgcgcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 59705 8 - 106623 accgcgcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2834864 8 - 123690457 accgcgcc i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73823507 8 + 74750902 accatgcc i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 17269951 8 - 17725628 accacgcc i saiBol1.JH378146 C 0 C 0 s dasNov3.JH569502 2691752 8 - 6579706 CCCGCGCC i dasNov3.JH569502 I 212 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e aotNan1.NW_018503669v1 6180 15 + 69927 I e micMur3.chr1 88377884 784 + 114275543 I e macNem1.NW_012014355v1 19136882 0 - 19675229 C e cebCap1.NW_016107444v1 6358955 16 + 6778120 I e canFam3.chr33 2313217 403 - 31377067 I e otoGar3.GL873829 199561 0 + 608964 C e colAng1.NW_012118932v1 7347747 875 - 7796314 M e manLeu1.NW_012102020v1 1409040 0 + 1977891 C e chlSab2.chr15 91342843 0 + 91754291 C e cerAty1.NW_012004056v1 16369945 0 - 16847902 C e macFas5.chr2 192397294 425 - 192460366 M e rheMac8.chr2 2331532 1498 - 204787373 I a score=17020.000000 s hg38.chr3_KI270934v1_alt 46449 8 + 163458 agggccca s panTro5.chr3 2518670 8 - 202621043 gggGCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110384 8 - 190779 gggGCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 59713 8 - 106623 aggGCCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2834872 8 - 123690457 aggGCCCA i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19136882 6 - 19675229 --gGCCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16369945 6 - 16847902 --gGCCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91342843 6 + 91754291 --ggccca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409040 6 + 1977891 --gGCCCA i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 17269959 7 - 17725628 -tggccTt i saiBol1.JH378146 C 0 I 1 s otoGar3.GL873829 199561 6 + 608964 AGGGCC-- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2691760 1 - 6579706 -------A i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e aotNan1.NW_018503669v1 6180 15 + 69927 I e micMur3.chr1 88377884 784 + 114275543 I e calJac3.chr17 73823515 1 + 74750902 I e cebCap1.NW_016107444v1 6358955 16 + 6778120 I e canFam3.chr33 2313217 403 - 31377067 I e colAng1.NW_012118932v1 7347747 875 - 7796314 M e macFas5.chr2 192397294 425 - 192460366 M e rheMac8.chr2 2331532 1498 - 204787373 I a score=244889.000000 s hg38.chr3_KI270934v1_alt 46457 89 + 163458 aagtcaaaccctcccacctgatctggctgctgcttccctgctgtctccttgTGGGAAAAGAACCTG--CAGTCCTGTGTCTA-GGCCAGTCC s panTro5.chr3 2518678 91 - 202621043 AAGTCAAACCCTCCCACCTGATCTGGCTGCTGCTTCCCTGCTGTCTTCTTGTGGGAAAAGAACCTGTGCAGTCCTGTGTCTA-GGCCAGTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110392 91 - 190779 AAGTCAAACCCTCCCACCTGATCTGGCTGCTGCTTCCCTGCTGTCTTCTTGTGGGAAAAGAACCTGTGCAGTCCTGTGTCTA-GGCCAGTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 59721 89 - 106623 AAGTCAAACCCTCCCACCTGATCTGGCTGCTGCTTCCCTGCTGTCTCCTTGTGGGAAAAGAACCTG--CAGTCCTGTGTCTA-GGCCAGTCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2834880 89 - 123690457 GAGTCAAACCCTCCCACCTGATCTGGCTGCTGCTTCCCTGCTGCCTCCTTGTGGGAAAAGAACCTG--CAGTCCTGTGTCTA-GGCCAGCCC i nomLeu3.chr11 C 0 M 186 s macNem1.NW_012014355v1 19136888 90 - 19675229 AAGTCAAACCCTCCCACCTGATCTGGCTGCTGCTTCCCTGCTGTCTCCTTGTGGGGAAGGAACCTG--CAGTCCTGTGTCTAGGGCCAGCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16369951 90 - 16847902 AAGTGAAACCCTCCCACCTGATCTGGCTGCTGCTTCCCTGCTGTCTCCTTGTGGGGAAGGAACCTG--CAGTCCTGTGTCTAGGGCCAGCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91342849 90 + 91754291 aagtcaaaccctcccacctgatctggctgctgcttccctgctgtctccttgTGGGGAAGGAACCTG--CAGTCCTGTGTCTAGGGCCAGCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409046 90 + 1977891 AAGTCAAACCCTCCCACCTGATCTGGCTGCTGCTTCCCTGCCGTCTCCTTGTGGGGAAGGAACCTA--CAGTCCTGTGTCTAGGGCCAGCCC i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 199567 24 + 608964 ------AGCCCTGCC--------------------------------CCTATGTTAAGAGCA------------------------------ i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2691761 45 - 6579706 ----------------------------------CCCGGGCCGTCTCTT----------ACACCAG--TGACGCCCTGCCCA-GGCCAGGGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e aotNan1.NW_018503669v1 6180 15 + 69927 I e micMur3.chr1 88377884 784 + 114275543 I e saiBol1.JH378146 17269966 1 - 17725628 I e calJac3.chr17 73823515 1 + 74750902 I e cebCap1.NW_016107444v1 6358955 16 + 6778120 I e canFam3.chr33 2313217 403 - 31377067 I e colAng1.NW_012118932v1 7347747 875 - 7796314 M e macFas5.chr2 192397294 425 - 192460366 M e rheMac8.chr2 2331532 1498 - 204787373 I a score=355541.000000 s hg38.chr3_KI270934v1_alt 46546 177 + 163458 TGCCCCTCAGTC----AAGCGAGGCGCCT--TTG----CCCCTGCCCTCACCAGCAGTCCCCGGGGCTCCGCTGGTTAACAGCGCAGGAAGCCGCGGCCCCACGCAGACCTGGGCTCCGGGCCCTCCGCCAGCTGCAGTTCCAGATCCCGCCGAAGGAGggggcgggcggagc-----gcgggtggggcggg s panTro5.chr3 2518769 172 - 202621043 TGCCCCTCAGTC----AAGCGAGGCGCCT--TTG----CCCCTGCCCTCACCAGCAGTCCCCGGGGCTCCGCTGGTT-----CACAGGAAGCCGCGGCCCCACGCAGGCGTGGTCTCCGGGCCCTCGGCCAGCTGCAGTTCCAGATCCCGCCGAAGGAGggggcgggcggagc-----gcgggtggggcggg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110483 172 - 190779 TGCCCCTCAGTC----AAGCGAGGCGCCT--TTG----CCCCTGCCCTCACCAGCAGTCCCCGGGGCTCCGCTGGTT-----CACAGGAAGCCGCGGCCCCACGCAGGCGTGGTCTCCGGGCCCTCCGCCAGCTGCAGTTCCAGATCCCGCCGAAGGAGGGGGCGGGCGGAGC-----GCGGGTGGGGCGGG i panPan2.chrUn_NW_014024201v1 C 0 T 3335 s gorGor5.CYUI01000576v1 59810 177 - 106623 TGCCCCTCAGTC----AAGCGAGGCGCCT--TTG----CCCCTGCCCTCACCAGCAGTCCCCGGGGCTCCGCTGGTTAACAGCGCAGGAAGCCGCGGCCCCACGCAGGCCTGGTCTCCGAGCCCTCCGCCAGCTGCAGTTCCAGATCCCGCCGAAGGAGggggcgggcggagc-----gcgggtggggcggg i gorGor5.CYUI01000576v1 C 0 C 0 s macNem1.NW_012014355v1 19136978 169 - 19675229 TGCCCCTCAGTC----ACGGGAGGCGCCT--TTG----CCCCTGCCCTCACCAGCAGTCCC-GGGGTTCCGCTGGTGAACAGCGCAGGAAGCCGCGG-CGCACGCAGGCCTGGTCTCCGCGCCCTCCGCCAGCTGCAGTTCCAGAT-CCGCCGAAGAAgggggtgggcggagc-----gggggcggg----- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16370041 169 - 16847902 TGCCCCTCAGTC----ACGGGAGGCGCCT--TTG----CCCCTGCCCTCACCAGCAGTCCC-GGGGTTCCGCTGGTGAACAGCGCAGGAAGCCGCGG-TGCACGCAGGCCTGGTCTCCGCGCCCTCCGCCTGCTGCGGTTCCAGAT-CCGCTGAAGAAgggggtgggcggagc-----gggggcggg----- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91342939 169 + 91754291 TGCCCCTCAGTC----ACGGGCGGCGCCT--TTG----CCCCTGCCCTCACCGGCAGTCCC--GCGTCCCGCTGGTGAACAGCGCAGGAAGCCGCAG-CGCACGCAGGCCTGGTCTCCGCGCCCTCCGCCTGCTGCGGTTCCAGATCCCGCCCAAGAACGGGATgggcggggc-----ggggccggg----- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409136 169 + 1977891 TGCCCCTCAGTC----ACGGGAGGCGCCT--TTG----CCCCTGCCCTCACCAGCAGTCCC-GGGGTTCCGCTGGTGAACAGCGCAGGAAGCCGCGG-TGCACGCAGCCCTGGTCTCCGCGCCCTCCGCCTGCTGCGGTTCCAGAT-CCGCCGAAGAAgggggtgggcggagc-----gggggcggg----- i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 199591 158 + 608964 -----CTCAGTCGGGGAGGCGAGGCGCCTTATGG----CCTCTGGGCC--CCTTCAGGCTGAGGGGTTCGG--------GAGTGCAG---CCCGTTG----GCGCTGTCCT---CTGCCAGCCTTCGCCCGGCTGCAGCTCCGGATCCGGTCAATCCAGGGGGCGGGACCATCTCTCTGGGGGCGGG----- i otoGar3.GL873829 C 0 I 26 s dasNov3.JH569502 2691806 129 - 6579706 ----------TG----GGTGCAGCCGCCC--TCGGACCACCCCGCCCCCACT-GCAGTCCCAGATCGCCCGCT------------------CCTCAG----CCCCAGACTCTGCCCCCGCACGCCCCGC---------------AGCCAGGCAGAGCAGCGGCGGCCAGAAGC----TGCAGGCCAG----- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e aotNan1.NW_018503669v1 6180 15 + 69927 I e micMur3.chr1 88377884 784 + 114275543 I e saiBol1.JH378146 17269966 1 - 17725628 I e calJac3.chr17 73823515 1 + 74750902 I e cebCap1.NW_016107444v1 6358955 16 + 6778120 I e canFam3.chr33 2313217 403 - 31377067 I e colAng1.NW_012118932v1 7347747 875 - 7796314 M e macFas5.chr2 192397294 425 - 192460366 M e rheMac8.chr2 2331532 1498 - 204787373 I e nomLeu3.chr11 2834969 186 - 123690457 M a score=39419.000000 s hg38.chr3_KI270934v1_alt 46723 43 + 163458 gcCC--GGCT--------------------------CTCCGGGTggg----------------cggggcggggcggggccgggctgg s panTro5.chr3 2518941 49 - 202621043 gcCC--AGCT--------------------------CTCCgggcggggcgggg----------cggggcggggcggggccgggctgg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 59987 43 - 106623 gcCC--AGCT--------------------------CTCCgggcggggcgggg----------cggggcggggcggggc------gg i gorGor5.CYUI01000576v1 C 0 C 0 s macNem1.NW_012014355v1 19137147 34 - 19675229 gccc--agct--------------------------ctccggg--------------------cggggaggggcggggccgg----- i macNem1.NW_012014355v1 C 0 I 1 s cerAty1.NW_012004056v1 16370210 34 - 16847902 gccc--agct--------------------------ctccggg--------------------cggggcggggccgggccgg----- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343108 29 + 91754291 gccc--agct--------------------------ctccggg--------------------cggggcggggccgg---------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409305 29 + 1977891 gccc--agct--------------------------ctccggg--------------------cggggcggggccgg---------- i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 199775 73 + 608964 GCCC--ATCCGTGNNNNNNNNNNNNNNNNNNNNTCAATCCAGG--GGGCGGGACCATCTCTCTGGGGGCGGGGCCGG---------- i otoGar3.GL873829 I 26 C 0 s dasNov3.JH569502 2691935 41 - 6579706 GCCCGGAGCT--------------------------ccccgggcgggggcggg----------cgggcgcgggcggg---------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e aotNan1.NW_018503669v1 6180 15 + 69927 I e micMur3.chr1 88377884 784 + 114275543 I e saiBol1.JH378146 17269966 1 - 17725628 I e calJac3.chr17 73823515 1 + 74750902 I e cebCap1.NW_016107444v1 6358955 16 + 6778120 I e canFam3.chr33 2313217 403 - 31377067 I e colAng1.NW_012118932v1 7347747 875 - 7796314 M e macFas5.chr2 192397294 425 - 192460366 M e rheMac8.chr2 2331532 1498 - 204787373 I e nomLeu3.chr11 2834969 186 - 123690457 M e panPan2.chrUn_NW_014024201v1 110655 3335 - 190779 T a score=136832.000000 s hg38.chr3_KI270934v1_alt 46766 50 + 163458 ggcg----gggGTGTGACTGCGCATGCCCACCTGTGGC----CGGCATCCCTGCCGCC- s panTro5.chr3 2518990 50 - 202621043 ggcg----gggGTGTGACTGCGCGTGCCCACCTGTGGC----CGGCATCCCTGCTGCC- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 60030 50 - 106623 ggcg----gggGTGTGACTGCGCATGCCCACCTGTGGC----CGGCATCCCTGCTGCC- i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192397724 54 - 192460366 GGCG----GGGCTGTGACTGCGCATGCCCACTTGTGGCCAGTCGGCATCCCTGCTGCC- i macFas5.chr2 M 425 C 0 s macNem1.NW_012014355v1 19137182 53 - 19675229 -gcg----gggcTGCGACTGCGCATGCCCACTTGTGGCCAGTCGGCATCCCTGCTGCC- i macNem1.NW_012014355v1 I 1 C 0 s cerAty1.NW_012004056v1 16370244 54 - 16847902 ggcg----gggcTGTGACTGCGCATGCCCACTTGTGGCCAGTCGGCATCCCTGCTGCC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343137 54 + 91754291 ggcg----gggcTGTGACTGCGCATGCCCACTTGTGGCCAGTCGGCATCCCTGCTGCC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409334 54 + 1977891 ggcg----gcgcTGTGACTGCGCATGCCCACTTGTGGCCAGTCGGCATCCCTGCTGCC- i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 199848 48 + 608964 GTGG----GATTTGCGACTGCGCATGCCCATCCGTGGCCAGTCTCTGTCCCT------- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2691976 54 - 6579706 ggcgcggcgggcTGGGACTGCGCATGCTC-----TGCTTAGCAGCCGCGCCCGTCGGGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e aotNan1.NW_018503669v1 6180 15 + 69927 I e micMur3.chr1 88377884 784 + 114275543 I e saiBol1.JH378146 17269966 1 - 17725628 I e calJac3.chr17 73823515 1 + 74750902 I e cebCap1.NW_016107444v1 6358955 16 + 6778120 I e canFam3.chr33 2313217 403 - 31377067 I e colAng1.NW_012118932v1 7347747 875 - 7796314 M e rheMac8.chr2 2331532 1498 - 204787373 I e nomLeu3.chr11 2834969 186 - 123690457 M e panPan2.chrUn_NW_014024201v1 110655 3335 - 190779 T a score=23284.000000 s hg38.chr3_KI270934v1_alt 46816 12 + 163458 CAGGTGCAGCTG s panTro5.chr3 2519040 12 - 202621043 CAGGTGCAGCTG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 60080 3 - 106623 CAG--------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835157 12 - 123690457 CAGGTGCAGCTG i nomLeu3.chr11 M 186 C 0 s macFas5.chr2 192397778 12 - 192460366 CAGGCACAGCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137235 12 - 19675229 CAGGCACAGCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16370298 12 - 16847902 CAGGCACAGCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343191 12 + 91754291 CAGGCGCAGCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409388 12 + 1977891 CAGGCGCAGCTG i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 199896 3 + 608964 --------GCT- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2692030 12 - 6579706 CCTGCGCGCCTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e aotNan1.NW_018503669v1 6180 15 + 69927 I e micMur3.chr1 88377884 784 + 114275543 I e saiBol1.JH378146 17269966 1 - 17725628 I e calJac3.chr17 73823515 1 + 74750902 I e cebCap1.NW_016107444v1 6358955 16 + 6778120 I e canFam3.chr33 2313217 403 - 31377067 I e colAng1.NW_012118932v1 7347747 875 - 7796314 M e rheMac8.chr2 2331532 1498 - 204787373 I e panPan2.chrUn_NW_014024201v1 110655 3335 - 190779 T a score=155771.000000 s hg38.chr3_KI270934v1_alt 46828 67 + 163458 ACTGCACGTGCAGCTGAATTCACACCAG-----Gtttttgt-------ttttgttttttgagacggagtcttgctctgt s panTro5.chr3 2519052 67 - 202621043 ACTGCACGTGCAGCTGAATTCACACCAG-----Gtttttgt-------ttttgttttttgagacggagtcttgctctgt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 60083 65 - 106623 -------GTACGGCTGAATTCACACCAGGttttgtttttgt-------ttttgttttttgagacggagtcttgctctgt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835169 74 - 123690457 ACTGCACATGCAGCTGAATTCACACCAG-----Gtttttgtttttttgttttgttttttgagacggagtcttgctctgt i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192397790 64 - 192460366 ACTGCACGCGCAGCTGAATTCACTCCAC-----Gtttttgt-------ttttg-tttttgagacggggtct--ctctgt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137247 64 - 19675229 ACTGCACGCGCAGCTGAATTCACTCCAC-----Gtttttgt-------ttttg-tttttgagacggggtct--ctctgt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16370310 66 - 16847902 ACTGCACGCGCAGCTGAATTCACTCCAC-----Gtttttgt-------ttttg-tttttgagacggggtctcgctctgt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343203 66 + 91754291 ACTGCACGCGCAGCTGAATTCACTCCAC-----Gtttttgt-------ttttg-tttttgagatggagtctcgctctgt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409400 66 + 1977891 ACTGCACGCGCAGCTGAATTCACTCCAC-----Gtttttgt-------ttttg-tttttgagacggggtctcgctctgt i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 199899 20 + 608964 -------GTGCAGCC------------C-----GTTGGCGC-------TGT---------------------------- i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e aotNan1.NW_018503669v1 6180 15 + 69927 I e micMur3.chr1 88377884 784 + 114275543 I e dasNov3.JH569502 2692042 0 - 6579706 C e saiBol1.JH378146 17269966 1 - 17725628 I e calJac3.chr17 73823515 1 + 74750902 I e cebCap1.NW_016107444v1 6358955 16 + 6778120 I e canFam3.chr33 2313217 403 - 31377067 I e colAng1.NW_012118932v1 7347747 875 - 7796314 M e rheMac8.chr2 2331532 1498 - 204787373 I e panPan2.chrUn_NW_014024201v1 110655 3335 - 190779 T a score=20690.000000 s hg38.chr3_KI270934v1_alt 46895 4 + 163458 cccc s panTro5.chr3 2519119 4 - 202621043 cccc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107320 4 - 190779 CCcc i panPan2.chrUn_NW_014024201v1 T 3335 C 0 s gorGor5.CYUI01000576v1 60148 4 - 106623 cccc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835243 4 - 123690457 cccc i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192397854 4 - 192460366 cccc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137311 4 - 19675229 cccc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16370376 4 - 16847902 cccc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343269 4 + 91754291 cccc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409466 4 + 1977891 cccc i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 199919 4 + 608964 CCTC i otoGar3.GL873829 C 0 I 111 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e aotNan1.NW_018503669v1 6180 15 + 69927 I e micMur3.chr1 88377884 784 + 114275543 I e dasNov3.JH569502 2692042 0 - 6579706 C e saiBol1.JH378146 17269966 1 - 17725628 I e calJac3.chr17 73823515 1 + 74750902 I e cebCap1.NW_016107444v1 6358955 16 + 6778120 I e canFam3.chr33 2313217 403 - 31377067 I e colAng1.NW_012118932v1 7347747 875 - 7796314 M e rheMac8.chr2 2331532 1498 - 204787373 I a score=273684.000000 s hg38.chr3_KI270934v1_alt 46899 67 + 163458 caggctggagtgcagtgttgcaatctcggctcactgcaacctccacctcccaggttcaagcgattct s panTro5.chr3 2519123 67 - 202621043 caggctggagtgcagtgttgcaatctgggctcactgcaacctccacctcccaggttcaagcgattct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107324 67 - 190779 caggctggagtgcagtgttgcaatctgggctcactgcaacctccacctcccaggttcaagcgattct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60152 67 - 106623 caggctggagtgcagtgttgcaatctcggctcactgcaacctccacctcccaggttcgagcgattct i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835247 67 - 123690457 caggctggagtgcagtgttgcaatctcggctcactgcaacctccacctcccaggttcaagcgattct i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192397858 67 - 192460366 caggctggagtgcagtgttgcaatctcggctcactgcaagctccgcctcccgggttcaagcgattct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137315 67 - 19675229 caggctggagtgcagtgttgcaatctcggctcactgcaagctccgcctcccgggttcaagcgattct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16370380 67 - 16847902 caggctggagtgcagtgttgcaatctcggctcactgcaagctccgcctcccgggttcaagcgattct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343273 67 + 91754291 caggctggagtgcagtgttgcaatctcggctcactgcaagctccacctcccaggttcaagcgattct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409470 67 + 1977891 caggctggagtgcagtgttgcaatctcggctcactgcaagctccgcctcccgggttcaagcgattct i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e aotNan1.NW_018503669v1 6180 15 + 69927 I e micMur3.chr1 88377884 784 + 114275543 I e dasNov3.JH569502 2692042 0 - 6579706 C e saiBol1.JH378146 17269966 1 - 17725628 I e calJac3.chr17 73823515 1 + 74750902 I e cebCap1.NW_016107444v1 6358955 16 + 6778120 I e canFam3.chr33 2313217 403 - 31377067 I e otoGar3.GL873829 199923 111 + 608964 I e colAng1.NW_012118932v1 7347747 875 - 7796314 M e rheMac8.chr2 2331532 1498 - 204787373 I a score=258511.000000 s hg38.chr3_KI270934v1_alt 46966 53 + 163458 gcctcagcctcctgagtagctgggattacaggtgcgcaccaccacgcctggct s panTro5.chr3 2519190 53 - 202621043 gcctcagcctcctgagtagctgggattacaggtgcgcaccaccacgcctggct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107391 53 - 190779 gcctcagcctcctgagtagctgggattacaggtgcgcaccaccacgcctggct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60219 53 - 106623 gcctcagcctcctgagtagctgggattacaggtgcgcaccaccacgcctggct i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835314 53 - 123690457 gcctcagcctcctgagtagctgggactacaggtgcgcaccaccatgcctggct i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192397925 53 - 192460366 gcctcagcctcccgagtagctgggactacaggtgcgcgccaccacgcctggct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137382 53 - 19675229 gcctcagcctcccgagtagcagggactacaggtgcgcgccaccacgcctggct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16370447 53 - 16847902 gcctcagcctcccgagtagctgggactacaggtgcgcgccaccatgcctggtt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343340 53 + 91754291 gcctcagcctcccgagtagctggcactacaggtgtgcgccaccacgcctggct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409537 53 + 1977891 gtctcagcctcccgagtagctgggactacaggtgcgcgccaccacgcctggct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7348622 53 - 7796314 gcctcagtctcccaagtagctgggactacaggtgcgcgccaccacgcctggct i colAng1.NW_012118932v1 M 875 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e aotNan1.NW_018503669v1 6180 15 + 69927 I e micMur3.chr1 88377884 784 + 114275543 I e dasNov3.JH569502 2692042 0 - 6579706 C e saiBol1.JH378146 17269966 1 - 17725628 I e calJac3.chr17 73823515 1 + 74750902 I e cebCap1.NW_016107444v1 6358955 16 + 6778120 I e canFam3.chr33 2313217 403 - 31377067 I e otoGar3.GL873829 199923 111 + 608964 I e rheMac8.chr2 2331532 1498 - 204787373 I a score=409521.000000 s hg38.chr3_KI270934v1_alt 47019 77 + 163458 aa-ttttgtatttttagtagagat-gggg-tttcaccgtgttgg-ccagtctggtctcgaacccctgacctcaagtgatgc s panTro5.chr3 2519243 77 - 202621043 aa-ttttgtatttttagtagagat-gggg-tttcaccatgttgg-ccagtctggtctcgaacccctgacctcaagtgatcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107444 77 - 190779 aa-ttttgtatttttagtagagat-gggg-tttcaccatgttgg-ccagtctggtctcaaacccctgacctcaagtgatcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60272 77 - 106623 aa-ttttgtatttttagtagagat-gggg-tttcaccatgttgg-ccagtctggtctcgaacccctgacctcaagtgatcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835367 78 - 123690457 aa-ttttgtatttttagtagagatggggg-tttcaccatgttgg-ccagtctggtctcgaacccctgacctcaagtaatcc i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192397978 78 - 192460366 aatttttgtatttttagtagagat-gggg-ttttaccgtgttgg-ccagtctggtcttgaactcctgatctcaagtgatcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137435 78 - 19675229 aatttttgtatttttagtagagat-gggg-ttttaccgtgttgg-ccagtctggtcttgaactcctgatctcaagtgatcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16370500 78 - 16847902 aatttttgtatttttagtagagat-gggg-ttttaccgtgttgg-ccagtctggtcttgaactcctgacctcaagtgatcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343393 78 + 91754291 catttttgtatttttagtagagat-gggg-ctttaccgtgttgg-ccagtctggtcttgaactcctgacctcaagtgatcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409590 78 + 1977891 aatttttgtatttttagtagagat-gggg-ttttaccgtgttgg-ccagtctggtcttgaactcctgacctcaagtgatct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7348675 78 - 7796314 aatttttgtatttttagtcgagat-gggg-ttttaccgtgttgg-ccagtctgatcttgaactcctgacctcaagtgatcc i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17269967 79 - 17725628 -atttttgtatttttagtagagat-ggggatttcaccatggtggttcaggctggtcttgaactcccaacctcaggtgatcc i saiBol1.JH378146 I 1 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e aotNan1.NW_018503669v1 6180 15 + 69927 I e micMur3.chr1 88377884 784 + 114275543 I e dasNov3.JH569502 2692042 0 - 6579706 C e calJac3.chr17 73823515 1 + 74750902 I e cebCap1.NW_016107444v1 6358955 16 + 6778120 I e canFam3.chr33 2313217 403 - 31377067 I e otoGar3.GL873829 199923 111 + 608964 I e rheMac8.chr2 2331532 1498 - 204787373 I a score=213153.000000 s hg38.chr3_KI270934v1_alt 47096 41 + 163458 gcccgcctcagcctctcaatgtgctgggattacaggcgtga s panTro5.chr3 2519320 41 - 202621043 gcccgcctcagcctctcaatgtgctgggattacaggcgtga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107521 41 - 190779 gcccgcctcagcctctcaatgtgctgggattacaggcgtga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60349 41 - 106623 gcccgcctcagcctctcaatgtgctgggattacaggcttga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835445 41 - 123690457 acccacctcagcctctcaatgtgctgggattacaggctgag i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192398056 41 - 192460366 gcccgcctcagcctttcagagtgctgggattccaggcgtga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137513 41 - 19675229 gcccgcctcagcctttcagagtgctgggattccaggcgtga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16370578 40 - 16847902 g-ccgcctcagcctttcagagtgctgggattccaggcgtga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343471 41 + 91754291 gcccgcctcagcctctcaaagtgctgggattccaggcgtga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409668 41 + 1977891 gcccgcctcagcctttcagagtgctgggattccaggcgtga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7348753 41 - 7796314 gcccgcctcagcccctcaaagtgctggaattccaggcgtga i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17270046 41 - 17725628 acccgccttggcctcccaacgtgctgggattacaggcggga i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 200034 30 + 608964 GCCAGTCTCTGTCCC------TGCTG----TCCAGGCG-GA i otoGar3.GL873829 I 111 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e aotNan1.NW_018503669v1 6180 15 + 69927 I e micMur3.chr1 88377884 784 + 114275543 I e dasNov3.JH569502 2692042 0 - 6579706 C e calJac3.chr17 73823515 1 + 74750902 I e cebCap1.NW_016107444v1 6358955 16 + 6778120 I e canFam3.chr33 2313217 403 - 31377067 I e rheMac8.chr2 2331532 1498 - 204787373 I a score=16625.000000 s hg38.chr3_KI270934v1_alt 47137 11 + 163458 gcccccgcg-cc s panTro5.chr3 2519361 11 - 202621043 gcccccgcg-cc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107562 11 - 190779 gcccccgcg-cc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60390 11 - 106623 gcccgcgcg-cc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835486 11 - 123690457 ccccccgcg-cc i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192398097 12 - 192460366 gccaccaggccc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137554 12 - 19675229 gccaccaggccc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16370618 12 - 16847902 gccaccaggccc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343512 12 + 91754291 gccaccaggccc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409709 12 + 1977891 gccaccaggccc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7348794 12 - 7796314 gccaccaggccc i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17270087 11 - 17725628 accaccatg-cc i saiBol1.JH378146 C 0 I 1 s otoGar3.GL873829 200064 3 + 608964 GCG--------- i otoGar3.GL873829 C 0 I 1 s dasNov3.JH569502 2692042 11 - 6579706 GCTCCCAGGTG- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e aotNan1.NW_018503669v1 6180 15 + 69927 I e micMur3.chr1 88377884 784 + 114275543 I e calJac3.chr17 73823515 1 + 74750902 I e cebCap1.NW_016107444v1 6358955 16 + 6778120 I e canFam3.chr33 2313217 403 - 31377067 I e rheMac8.chr2 2331532 1498 - 204787373 I a score=16117.000000 s hg38.chr3_KI270934v1_alt 47148 2 + 163458 gg s panTro5.chr3 2519372 2 - 202621043 gg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107573 2 - 190779 gg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60401 2 - 106623 gg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835497 2 - 123690457 gg i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192398109 2 - 192460366 gg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137566 2 - 19675229 gg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16370630 2 - 16847902 gg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343524 2 + 91754291 gg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409721 2 + 1977891 gg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7348806 2 - 7796314 gg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73823516 2 + 74750902 ag i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17270099 2 - 17725628 gg i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 6358971 2 + 6778120 gg i cebCap1.NW_016107444v1 I 16 C 0 s aotNan1.NW_018503669v1 6195 2 + 69927 gg i aotNan1.NW_018503669v1 I 15 C 0 s otoGar3.GL873829 200068 2 + 608964 AC i otoGar3.GL873829 I 1 C 0 s dasNov3.JH569502 2692053 2 - 6579706 AA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e mm10.chr16 32781283 363 + 98207768 I e micMur3.chr1 88377884 784 + 114275543 I e canFam3.chr33 2313217 403 - 31377067 I e rheMac8.chr2 2331532 1498 - 204787373 I a score=132309.000000 s hg38.chr3_KI270934v1_alt 47150 20 + 163458 ccCAGGCCCATGTTTTTAAA- s panTro5.chr3 2519374 20 - 202621043 ccCAGGCCCATGTTTTTAAA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107575 20 - 190779 ccCAGGCCCATGTTTTTAAA- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60403 20 - 106623 ccCAGGCCCATGTTTTTAAA- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835499 20 - 123690457 ccCAGGCCCAGGTTTCTAAA- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192398111 19 - 192460366 ccCAGGCCCATG-TTTTAAA- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137568 19 - 19675229 ccCAGGCCCATG-TTTTAAA- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16370632 19 - 16847902 ccCAGGCCCATG-TTTTAAA- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343526 19 + 91754291 ccCAGGCCCATG-TTTTAAA- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409723 19 + 1977891 ccCAGGCCCATG-TTTTAAA- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7348808 20 - 7796314 ccCAGGCCCTTGTTTTTAAA- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73823518 19 + 74750902 ccTAGACCCACA-TTTTAAA- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17270101 19 - 17725628 ccTAGGCCCATG-TTTTAAA- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6358973 19 + 6778120 ccTAGGCCCACG-TTTTAAA- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 6197 19 + 69927 ccTAGACCCATG-TTTTAAA- i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 200070 9 + 608964 TCCAGGGAA------------ i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32781646 18 + 98207768 CCCAGACATGGT-TTTTAA-- i mm10.chr16 I 363 C 0 s dasNov3.JH569502 2692055 20 - 6579706 CTCAGACGTGCG-TTTCCAAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14787065 624 - 22200726 I e micMur3.chr1 88377884 784 + 114275543 I e canFam3.chr33 2313217 403 - 31377067 I e rheMac8.chr2 2331532 1498 - 204787373 I a score=12637.000000 s hg38.chr3_KI270934v1_alt 47170 1 + 163458 G s panTro5.chr3 2519394 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107595 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60423 1 - 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835519 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192398130 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137587 1 - 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16370651 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343545 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409742 1 + 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7348828 1 - 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73823537 1 + 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17270120 1 - 17725628 G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6358992 1 + 6778120 G i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 6216 1 + 69927 G i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14787689 1 - 22200726 G i proCoq1.NW_012133858v1 I 624 C 0 s otoGar3.GL873829 200079 1 + 608964 A i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32781664 1 + 98207768 G i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2692075 1 - 6579706 A i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88377884 784 + 114275543 I e canFam3.chr33 2313217 403 - 31377067 I e rheMac8.chr2 2331532 1498 - 204787373 I a score=694649.000000 s hg38.chr3_KI270934v1_alt 47171 60 + 163458 CCCACACCTGCCTCCTTTGCCCAGTGGTCTCACTTCAGCACGGCCTCAGGGCTGACTCAG s panTro5.chr3 2519395 60 - 202621043 CCCACGCCTGCCTCCTTTGCCCAGTGGTCTCACTTCAGCACGGCCTCAGGGCTGACTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107596 60 - 190779 CCCACGCCTGCCTCCTTTGCCCAGTGGTCTCACTTCAGCACGGCCTCAGGGCTGACTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60424 60 - 106623 CCCACACCCGCCTCCTTTGCCCAGTGGTCTCACTTCAGCACGGCCTCAGGGCTGACTCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835520 60 - 123690457 CCCACACCTGCCTCCTTTGCCCAGTGGTCTCACTTCAGCGCAGCCTCAGGGCTGACTCAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192398131 59 - 192460366 CCCACAGCTGCCT-CTTGGCCCAGTGGCCTCACTTCAGAACGGCCTCAGGGCTGACTCAG i macFas5.chr2 C 0 I 4 s macNem1.NW_012014355v1 19137588 59 - 19675229 CCCACAGCTGCCT-CTTGGCCCAGTGGCCTCACTTCAGAACGGCCTCAGGGCTGACTCAG i macNem1.NW_012014355v1 C 0 I 4 s cerAty1.NW_012004056v1 16370652 59 - 16847902 CCCACAGCTGCCT-CTTTGCCCAGTGGCCTCACTTCAGCACGGCCTCAGGGCTGACTCAG i cerAty1.NW_012004056v1 C 0 I 4 s chlSab2.chr15 91343546 60 + 91754291 CCCACAGCTGCCTCCTTTGCTCAGTGGCCTCACTTCAGCACGGCCTCAGGGCTGACTCAG i chlSab2.chr15 C 0 I 4 s manLeu1.NW_012102020v1 1409743 59 + 1977891 CCCACAGCTGCCT-CTTTGCCCAGCGGCCTCACTTCAGCACGGCCTCAGGGCTGACTCAG i manLeu1.NW_012102020v1 C 0 I 4 s colAng1.NW_012118932v1 7348829 60 - 7796314 CCCACAACTGCCTCCTTTGCCCAGTGGTCTCACTTCAGCACGGCCTCAGGGCTGACTCAG i colAng1.NW_012118932v1 C 0 I 4 s calJac3.chr17 73823538 58 + 74750902 CCCACACCTGCCTCCTTTGCCCAATGGTCT--CTTCAGCATGACCTCAGGGCTGACTCAG i calJac3.chr17 C 0 I 4 s saiBol1.JH378146 17270121 58 - 17725628 CCTACACCTGCCTCCTTTGCCCAGTGGTCT--CTTCAGCATGACGTCAGGGCTGACTCAG i saiBol1.JH378146 C 0 I 2 s cebCap1.NW_016107444v1 6358993 58 + 6778120 CCCACACCTGCCTCCTTTGCCCAGTGGTCT--CTTCGGCATGACCTCAGGGCTGACTCAG i cebCap1.NW_016107444v1 C 0 I 4 s aotNan1.NW_018503669v1 6217 57 + 69927 CCCACACCTGCCTCCTTTGCCCAGCAGCCT--CTTCAGCATGACCTCA-GGCTGACTCAG i aotNan1.NW_018503669v1 C 0 I 4 s proCoq1.NW_012133858v1 14787690 60 - 22200726 CCCACGCCTGCCTCCTTTGCCCGGTGGCCTCGCCTCAGCACGGCCTCTGGGCTGACTCGG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 200080 59 + 608964 TTCCCACCTGCCTCCTTTGCCCGGTGGCCTCGCCTCCGCACGGCCTCAGCCCTGACCC-G i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32781665 59 + 98207768 GTTATGCCTCCCTCCTTTGATTGGTGACCTCAATTCAAAATGGCCTTAGAGCTGGCTGG- i mm10.chr16 C 0 C 0 s canFam3.chr33 2313620 54 - 31377067 CCCCTGCCAGTCTCCCCTACCCAGTAGGCA--CTTCGGTTCTGCCTC----CTTCCCCAG i canFam3.chr33 I 403 C 0 s dasNov3.JH569502 2692076 60 - 6579706 CCCCCGCCTGCAGCCTTTGCTTAGTGGCCTTGCCTCAGCGCGGCTTCAGGGCTGACGCGG i dasNov3.JH569502 C 0 I 4 e micMur3.chr1 88377884 784 + 114275543 I e rheMac8.chr2 2331532 1498 - 204787373 I a score=87492.000000 s hg38.chr3_KI270934v1_alt 47231 6 + 163458 TCTCTC s panTro5.chr3 2519455 6 - 202621043 TCTCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107656 6 - 190779 TCTCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60484 6 - 106623 TCTCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835580 6 - 123690457 TCTCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2333030 6 - 204787373 TCTCTC i rheMac8.chr2 I 1498 C 0 s macFas5.chr2 192398194 6 - 192460366 TCTCTC i macFas5.chr2 I 4 C 0 s macNem1.NW_012014355v1 19137651 6 - 19675229 TCTCTC i macNem1.NW_012014355v1 I 4 C 0 s cerAty1.NW_012004056v1 16370715 6 - 16847902 TCTCTC i cerAty1.NW_012004056v1 I 4 C 0 s chlSab2.chr15 91343610 6 + 91754291 TCTCTC i chlSab2.chr15 I 4 C 0 s manLeu1.NW_012102020v1 1409806 6 + 1977891 TCTCTC i manLeu1.NW_012102020v1 I 4 C 0 s colAng1.NW_012118932v1 7348893 6 - 7796314 TCTCTC i colAng1.NW_012118932v1 I 4 C 0 s calJac3.chr17 73823600 6 + 74750902 TCTCTC i calJac3.chr17 I 4 C 0 s saiBol1.JH378146 17270181 6 - 17725628 TCTCTC i saiBol1.JH378146 I 2 C 0 s cebCap1.NW_016107444v1 6359055 6 + 6778120 TCTCTC i cebCap1.NW_016107444v1 I 4 C 0 s aotNan1.NW_018503669v1 6278 6 + 69927 TCTCTC i aotNan1.NW_018503669v1 I 4 C 0 s proCoq1.NW_012133858v1 14787750 4 - 22200726 --CCTC i proCoq1.NW_012133858v1 C 0 I 115 s otoGar3.GL873829 200139 4 + 608964 --CCTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32781724 6 + 98207768 ACCCTC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2692140 6 - 6579706 TCTCCC i dasNov3.JH569502 I 4 C 0 e micMur3.chr1 88377884 784 + 114275543 I e canFam3.chr33 2313674 0 - 31377067 C a score=556065.000000 s hg38.chr3_KI270934v1_alt 47237 58 + 163458 CGGAGAGTGGGGCGAGCCCAGCCTCTCCTACAGAACCTCTT----CT-TCCCCAGCAGAAGAG s panTro5.chr3 2519461 58 - 202621043 CGGAGAGTGGGGCAAGCCCAGCCTCTCCTACAGAACCTCTT----CT-TCCCCAGCAGAAGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107662 58 - 190779 CGGAGAGTGGGGCGAGCCCAGCCTCTCCTACAGAACCTCTT----CT-TCCCCAGCAGAAGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60490 58 - 106623 CGGAGAGTGGGGCGAGCCCAGCCTCTCCTACAGAACCTCTT----CT-TCCCCAGCAGAAGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835586 58 - 123690457 TGGAGAGTGGGGCGAGCCCAGCCTCTCCTACAGAACCTCTT----CT-TCCCCAGCAGAAGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2333036 55 - 204787373 CGGAGAGTGGGGCAAGCCCAGCCTCTCCTAGAGAACA---T----CT-TCCCCAGCGGAAGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398200 55 - 192460366 CGGAGAGTGGGGCAAGCCCAGCCTCTCCTAGAGAACA---T----CT-TCCCCAGCGGAAGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137657 55 - 19675229 CGGAGAGCGGGGCAAGCCCAGCCTCTCCTAGAGAACA---T----CT-TCCCCAGCGGAAGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16370721 55 - 16847902 CGGAGAGTGGGGCAAGCCCAGCCTCTCCTAGAGAACA---T----CT-TCCCCAGCGGAAGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343616 55 + 91754291 CGGAGAGCGGGGCAAGCCCAGCCCCTCCCAGAGAACC---T----CT-TCCCCAGCGGAAGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409812 55 + 1977891 CGGAGAGTGGGGCAAGCCCAGCCTCTCCTAGAGAACA---T----CT-TCCCCAGCGGAAGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7348899 58 - 7796314 CGGAGAGTGGGGCAAGCCCAGCGTCTCCTAGAGAACATCTT----CT-TCCCCAGGAGAAGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73823606 58 + 74750902 CAGAGAGTGGGGCGAGCCCAGCCTCTCCTAGAGAACCTCCT----CT-GCCCCAGCAGGAGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17270187 58 - 17725628 CAGAGAGTGGGGCGAGCTCAGCCTCTCCTGGAGAACCTCCT----CT-GCCCCAGCAGAAGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6359061 58 + 6778120 CAGAGAGTGGGGCGAGCCCAGCCTCTCCTAGAGAACCTCCT----CT-GCCCCAGCAGAAGAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 6284 55 + 69927 TAGAGAGTGGGGCGAGCCCAGCCTCTCCTAGAGAACCTCCT----CT-GCCCCAGC---AGAA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 200143 58 + 608964 -TGTCTACTGCGTGTGCCCAGCCTGTCCTGTAGAACCTCCT----CTGGCCTCGGCAGAAGAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32781730 55 + 98207768 CACCCAGCTGAT--AGCCCTGCCTGTCTTGCATAACC-CCT----GG-TCCCCAGGAGTGGAA i mm10.chr16 C 0 C 0 s canFam3.chr33 2313674 47 - 31377067 AGGAGAGT--------CCCAGCCTGTGGAGGGAAACCTCCTGGGGCC-TCCCCACT------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2692146 56 - 6579706 TAGTTAGCGGGG-GAGCCCAGCCTG-ACGGGAGCGTCTCAC----TG-GCCCCACGAGGAGAG i dasNov3.JH569502 C 0 I 5 e proCoq1.NW_012133858v1 14787754 115 - 22200726 I e micMur3.chr1 88377884 784 + 114275543 I a score=50942.000000 s hg38.chr3_KI270934v1_alt 47295 8 + 163458 GA----------------------GGGGCT s panTro5.chr3 2519519 8 - 202621043 GA----------------------GGGGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107720 8 - 190779 GA----------------------GGGGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60548 8 - 106623 GA----------------------GGGGCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835644 8 - 123690457 GA----------------------GGGGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2333091 8 - 204787373 GC----------------------GGGGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398255 8 - 192460366 GC----------------------GGGGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137712 8 - 19675229 GC----------------------GGGGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16370776 8 - 16847902 GC----------------------GGGGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343671 30 + 91754291 GCGGGGCTGGGAGGCGGAAGAGGTGGGGCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409867 8 + 1977891 GC----------------------GGGGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7348957 8 - 7796314 GC----------------------GGGGCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73823664 8 + 74750902 GA----------------------GAGGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17270245 8 - 17725628 GA----------------------GAGGCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6359119 8 + 6778120 GA----------------------GAGGCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 6339 8 + 69927 GA----------------------GAGACT i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 200201 8 + 608964 GA----------------------GGGGTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32781785 4 + 98207768 GG----------------------AA---- i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14787754 115 - 22200726 I e micMur3.chr1 88377884 784 + 114275543 I e dasNov3.JH569502 2692202 5 - 6579706 I e canFam3.chr33 2313721 0 - 31377067 C a score=216532.000000 s hg38.chr3_KI270934v1_alt 47303 19 + 163458 GGGAGGCTGAGCTCCCGCC------ s panTro5.chr3 2519527 19 - 202621043 GGGAGGCTGAGCTCCCGCC------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107728 19 - 190779 GGGAGGCTGAGCTCCCGCC------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60556 19 - 106623 GGGAGGCTGAGCTCCCGCC------ i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835652 19 - 123690457 GGGAGGCTGAGCTCCCGCC------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2333099 19 - 204787373 GGGAGGCTGAGCTCCCGCC------ i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398263 19 - 192460366 GGGAGGCTGAGCTCCCGCC------ i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137720 19 - 19675229 GGGAGGCTGAGCTCCCGCC------ i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16370784 19 - 16847902 GGGAGGCTGAGCTCCCACC------ i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343701 19 + 91754291 GGGAGGCTGAGCTCCCGCC------ i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409875 19 + 1977891 GGGAGGCTGAGCTCCCGCC------ i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7348965 19 - 7796314 GGAAGGCTGAGCTCCCGCC------ i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73823672 19 + 74750902 GGGAGGCTGAGCACCCACC------ i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17270253 17 - 17725628 GGGAGGCTGAACACC--GC------ i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6359127 19 + 6778120 GGGAGGCTGAGCACCCACC------ i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 6347 19 + 69927 GGGAGGCTGAGCAGCCGCC------ i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 200209 19 + 608964 GGCAGGCTGAGCACCCGCC------ i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32781789 5 + 98207768 --------------TCGTC------ i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2692207 25 - 6579706 GGGAGGCTGAGCGCCCCTCCGCGCT i dasNov3.JH569502 I 5 C 0 e proCoq1.NW_012133858v1 14787754 115 - 22200726 I e micMur3.chr1 88377884 784 + 114275543 I e canFam3.chr33 2313721 0 - 31377067 C a score=173460.000000 s hg38.chr3_KI270934v1_alt 47322 29 + 163458 TCTGA-CCGCCTGTCTGTC---------TCTCTTGGTCA s panTro5.chr3 2519546 29 - 202621043 TCTGA-CCACCTGTCTGTC---------TCTCTTGGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107747 29 - 190779 TCTGA-CCACCTGTCTGTC---------TCTCTTGGTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60575 29 - 106623 TCTGA-CCACCTGTCTGTC---------TCTCTTGGTCA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2333118 27 - 204787373 TCTGA-CACGCTGTC--TC---------TCTCTCGGTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398282 27 - 192460366 TCTGA-CACGCTGTC--TC---------TCTCTCGGTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137739 27 - 19675229 TCTGA-CACGCTGTC--TC---------TCTCTCGGTCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16370803 27 - 16847902 TCTGA-CACACTGTC--TC---------TCTCTCGGTCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343720 27 + 91754291 TCTGA-CACGCTGTC--TC---------TCTCTCGGTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409894 27 + 1977891 TCTGA-CACACTGTC--TC---------TCTCTCGGTCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7348984 27 - 7796314 TCTGA-CACGCTGTC--TC---------TCTCGCGGGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73823691 28 + 74750902 TCTGACCACGCTGTC--TC---------TCTCTCGGTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17270270 28 - 17725628 CGTGACCACACTGTC--TC---------TCTCTCCGTCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6359146 28 + 6778120 TCTGACCACGCTGTC--TC---------TCTCTCGGTCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 6366 28 + 69927 TCTGACCACGCTGCC--TC---------TCTCTCGGTCC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 200228 30 + 608964 -------TCCCCGCC--TCTAATCGTGGTCCCTCTGTCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32781794 27 + 98207768 ACTGACCACAATGCA--T----------TCTCTCTGTCT i mm10.chr16 C 0 C 0 s canFam3.chr33 2313721 26 - 31377067 GCTGA---CCTTGTC--CCT--------TCCCTCTGTCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2692232 26 - 6579706 GCTGA-CCCCCT-CC--CC---------GCTCTGTGTCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14787754 115 - 22200726 I e micMur3.chr1 88377884 784 + 114275543 I e nomLeu3.chr11 2835671 0 - 123690457 C a score=2596716.000000 s hg38.chr3_KI270934v1_alt 47351 162 + 163458 CCAGCTGTGTGTCCTTCTCCATCTACACGGCCTGGGGCGAGCACTGTGAGCACCTGAGCATGAAACTCGACGCGTTCTTCGGCATCTTCTTTGGGGCCCTGGGCGGCCTCTTGCTGCTGGGGGTCGGGACGTTCGTGGTCCT---------GCGCTTCTGGGGTTGCTCCG s panTro5.chr3 2519575 162 - 202621043 CCAGCTGTGTGTCCTTCTCCATCTACATGGCCTGGGGCGAGCACTGTGAGCACCTGAGCATGAAACTCGACGCGTTCTTCGGCATCTTCTTTGGGGCCCTGGGCGGCCTCTTGCTGCTGGGGGTCGGGACGTTCGTGGTCCT---------GCGCTTCTGGGGTTGCTCCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107776 162 - 190779 CCAGCTGTGTGTCCTTCTCCATCTACATGGCCTGGGGCGAGCACTGTGAGCACCTGAGCATGAAACTCGACGCGTTCTTCGGCATCTTCTTTGGGGCCCTGGGCGGCCTCTTGCTGCTGGGGGTCGGGACGTTCGTGGTCCT---------GCGCTTCTGGGGTTGCTCCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60604 162 - 106623 CCAGCTGTGTGTCGTCCTCCATCTACACGGCCTGGGGCGAGCACTGTGAGCACCTGAGCATGAAACTCGACGCGTTCTTCGGCATCTTCTTTGGGGCCCTGGGCGGCCTCTTGCTGCTGGGGGTCGGGACGTTCGTGGTCCT---------TCGCTTCTGGGGTTGCTCCG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2333145 162 - 204787373 CCAGCTGTGTGTCCTTCTCCATCTACACGGCCTGGGGAGAGCACTGTGAGCACCTGAGCATGAAACTCGACGTGTTCTTCGGGATCTTCTTTGGGTCCCTGGGCGGCCTCTTGCTGCTGGGGGTCGGGGTGTTCGTGGTCCT---------GCGCTTCTGGAATTGCTCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398309 162 - 192460366 CCAGCTGTGTGTCCTTCTCCATCTACACGGCCTGGGGAGAGCACTGTGAGCACCTGAGCATGAAACTCGACGTGTTCTTCGGGATCTTCTTTGGGTCCCTGGGCGGCCTCTTGCTGCTGGGGGTCGGGGTGTTCGTGGTCCT---------GCGCTTCTGGAATTGCTCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137766 162 - 19675229 CCAGCTGTGTGTCCTTCTCCATCTACACGGCCTGGGGAGAGCACTGTGAGCACCTGAGCATGAAACTCGACGTGTTCTTCGGGATCTTCTTTGGGTCCCTGGGCGGCCTCTTGCTGCTGGGGGTCGGGGTGCTCGTGGTCCT---------GCGCTTCTGGAATTGCTCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16370830 162 - 16847902 CCAGCTGTGTGTCCTTCTCTATCTACACGGCCTGGGGAGAGCACTGTGAGCACCTGAGCATGAAACTCGACGTGTTCTTCGGGATCTTCTTTGGGTCCCTGGGCGGCCTCTTGCTGCTTGGGGTCGGGGTGTTCGTGGTCCT---------GCGCTTCTGGAATTGCTCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343747 162 + 91754291 CCAGCTGTGTGTCCTTCTCCATCTACACGGCCTGGGGAGAGCACTGTGAGCACCTGAGCATGAAACTCGACGCGTTCTTTGGGATCTTCTTTGGGTCCCTGGGCGGCCTCTTGCTGCTGGGGGTCGGGGTGTTCGTGGTCCT---------GCGCTTCTGGAATTGCTCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1409921 162 + 1977891 CCAGCTGTGTGTCCTTCTCCATCTACACGGCCTGGGGAGAGCACTGTGAGCACCTGAGCATGAAACTCGACGTGTTCTTCGGGATCTTCTTTGGGTCCCTGGGCGGCCTCTTGCTGCTGGGGGTCGGGGTGTTCGTGGTCCT---------GCGTTTCTGGCATTGCTCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349011 162 - 7796314 CCAGCTGTGTGTCCTTCTCCATCTACACGGCCTGGGGAGAGCGCTGTGAGCACCTGAGCATGAAACTCGACGCGTTCTTCGGGATCTTCTTCGGGTCCCTGGGCGGCCTCTTGCTGCTGGGGGTCGGGATGTTCGTGGTCCT---------GCGCTTCTGGGATTGCTCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73823719 162 + 74750902 CCAGCTGCGTGTCCTTCTCCATCTACACAGCCTGGGGTGAGCGCTGTGAGCACCTGAGCATGAAACTCAAAGCGTTCTTCGGGATCTTCTTTGGGGCCCTCAGTGCCCTCTTGCTGCTGGGGTTCGGGATGTTTGTGGTCCT---------GCACTTCTGGGGTTGCTCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17270298 162 - 17725628 CCAGCTGTGTGTCCTTCTCCATCTACACGGCCTGGGGTGAGCGCTGTGAGCACCTCAGCATGAAACTCGAAGCGTTCTTCGGGATCTTCTTCGGGGCCCTCGGGGCCCTCTTGCTGCTGGGGATCGGGATGTGTGTGGTCCT---------GCATTTCTGGGGCTGCTCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6359174 162 + 6778120 CCAGCTGTGTGTCCTTCTCCATCTACACGGCCTGGGGTGAGCGCTGTGAGCACCTGAGCATGAAACTCGAAGCGTTCTTCGGGATCTTCTTTGGGGCCCTCGGTGCCCTCTTGCTGCTGGGGTTCGGGACGTTTGTGGTCCT---------GCGCTTCTGGGGTTGCTCCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 6394 162 + 69927 CCAGCTGTGTGTCCTTCTCCATCTACACGGCCTGGGGTGAGCGCTGTGAGCACCTGAGCGTGAAACTCGAAGCGTTCTTCGGGATCTTCTTCGGGGCCCTCGGTGCCGTCTTGCTGCTGGGGTTCGGGACGTTTATGGTCCT---------GCACTTCTGGGGTTGCTCCA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88378668 162 + 114275543 CCAGCTGTGTGTCCTTCACCATCTACACCGCCTGGGGCGAGCGCTGTGAGCACCTGAGTGTGAAACTCGGCGCGTTCTTCGGGATCCTCTTTGGGGCCCTGAGCGTCCTCTTGGTGCTCGGGGTCGCGGTCTTTGTGGTCCT---------GCGCTTCTGGGGCTGCTCCG i micMur3.chr1 I 784 C 0 s proCoq1.NW_012133858v1 14787869 162 - 22200726 CCAGCTGTGTGTCCTTCACCATCTACACGGCCTGGGGCGAGCGCTGTGAGCACCTGAGTGTGAAACTCGGCGCGTTCTTCGGGATCCTCTTTGGCGCCCTGAGCGTCCTCTTGCTGCTGGGGGCCGCGGTGTTTGTGGTCCT---------GCGCTTCTGGGGCTGCTCCG i proCoq1.NW_012133858v1 I 115 I 52 s otoGar3.GL873829 200258 162 + 608964 CCAGCTGCGTGTCTTTCTCCATCTACACCGCCTGGGGCGAGCGCTGTCAGCATCTGAGCGTGAAACTCGGCGCGTTCTTCGGGATCCTCTTTGGGGCCCTGAGCGCCCTCTTCCTGCTGGGGGTCGTGGTTTTTGTGTGCCT---------GCGCTTCTGGGGCTGCTCCG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32781821 162 + 98207768 TCAGCTGCGCATCCTTCACCATCTACTCATCCTCGGGCGAACACTGTGAGCACCTAAGTGTGAAACTTGGGGCATTCTACGGGATCCTCTTCGGAACCCTGGGCGCCCTCTTGCTACTGGGGATCTTAGCATTTATGATCTT---------TCACTTCTGCGGCTGCTCCA i mm10.chr16 C 0 C 0 s canFam3.chr33 2313747 171 - 31377067 ACAGCTGTGTGCCTTTCTCCATCTACACGCCCTGGGGCGAGCGCTGTGAGCATCTGGGCATGAAGCTCAGTGCCTTCTTTGGAATCCTCTTTGGAGCCCTGTTCATCCTCCTGCTGCTGGGGGCTGTGGGGTTTGCAGTCCTGTACTTCTGGCGCTTCTGGCGCTACTCCC i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 2692258 162 - 6579706 CCAGCTGTGTGCCCTTCTCCATCTACACACCGTGGGGCGAGCACTGTGAGCACCTGAGCATGAAACTCAGAGCCTTCTTCGGGATCTTCTTTGGGACCCTGGGCGCCCTCCTGGTGCTCGGGGCCGGGGCCTTCGTGGTGCT---------GCGCTTCCTCCGCTCCTCCC i dasNov3.JH569502 C 0 C 0 e nomLeu3.chr11 2835671 0 - 123690457 C a score=139218.000000 s hg38.chr3_KI270934v1_alt 47513 12 + 163458 GGGCCAGGTTCT s panTro5.chr3 2519737 12 - 202621043 GGGCCAGGTTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107938 12 - 190779 GGGCCAGGTTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60766 12 - 106623 GGGCCAGGTTCT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2333307 12 - 204787373 GGACCAGCTTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398471 12 - 192460366 GGACCAGCTTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137928 12 - 19675229 GGACCAGCTTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16370992 12 - 16847902 GGACCAGCTTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343909 12 + 91754291 GGACCAGCTTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410083 12 + 1977891 GGACCAGCTTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349173 12 - 7796314 GGACCAGATTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73823881 12 + 74750902 GGACCAGATTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17270460 12 - 17725628 GGACCAGATTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6359336 12 + 6778120 GGACCAGATTCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 6556 12 + 69927 GGACCAGATTCT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88378830 12 + 114275543 GGACCAAGTACT i micMur3.chr1 C 0 I 23 s otoGar3.GL873829 200420 12 + 608964 GGACCAAGTATG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32781983 12 + 98207768 AGAACAAGTTCT i mm10.chr16 C 0 C 0 s canFam3.chr33 2313921 12 - 31377067 GGAACCACTACT i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 2692420 12 - 6579706 AGACCGGGTACT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14788031 52 - 22200726 I e nomLeu3.chr11 2835671 0 - 123690457 C a score=166291.000000 s hg38.chr3_KI270934v1_alt 47525 16 + 163458 CCTATTTCCTGAACTC s panTro5.chr3 2519749 16 - 202621043 CCTATTTCCTGAACTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107950 16 - 190779 CCTATTTCCTGAACTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60778 16 - 106623 CCTATTTCCTGAACTT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2333319 16 - 204787373 CCTATCTCCTGCACTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398483 16 - 192460366 CCTATCTCCTGCACTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137940 16 - 19675229 CCTATCTCCTGCACTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371004 16 - 16847902 CCTATCCCCTGCACTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343921 16 + 91754291 CCTATCTCCTGCGCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410095 16 + 1977891 CCTATCCCCTGCACTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349185 16 - 7796314 CGTATCTCCTGCACTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73823893 16 + 74750902 CCTACCCTCTGGACTC i calJac3.chr17 C 0 I 4 s saiBol1.JH378146 17270472 16 - 17725628 CCTATCCTCTGGACAC i saiBol1.JH378146 C 0 I 4 s cebCap1.NW_016107444v1 6359348 16 + 6778120 CCTATCCTCTGGACAC i cebCap1.NW_016107444v1 C 0 I 4 s aotNan1.NW_018503669v1 6568 16 + 69927 CATATCCTCTGGACTC i aotNan1.NW_018503669v1 C 0 I 4 s otoGar3.GL873829 200432 16 + 608964 ACTACCGTCTGGACTC i otoGar3.GL873829 C 0 I 4 s mm10.chr16 32781995 16 + 98207768 CCTACCCTTTGGACTC i mm10.chr16 C 0 I 2 s canFam3.chr33 2313933 16 - 31377067 CCCACCGCCTGGACTC i canFam3.chr33 C 0 I 4 s dasNov3.JH569502 2692432 16 - 6579706 CCTACGCCCTGGACTC i dasNov3.JH569502 C 0 I 4 e proCoq1.NW_012133858v1 14788031 52 - 22200726 I e micMur3.chr1 88378842 23 + 114275543 I e nomLeu3.chr11 2835671 0 - 123690457 C a score=228957.000000 s hg38.chr3_KI270934v1_alt 47541 18 + 163458 AGCTG--AGGCCTT--GCCTTG s panTro5.chr3 2519765 18 - 202621043 AGCTG--AGGCCTT--GCCTTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107966 18 - 190779 AGCTG--AGGCCTT--GCCTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60794 18 - 106623 AGCTG--AGGCCTT--GCCTTG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2333335 18 - 204787373 AGCTG--AGGCCTC--GCCTTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398499 18 - 192460366 AGCTG--AGGCCTC--GCCTTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137956 18 - 19675229 AGCTG--AGGCCTC--GCCTTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371020 18 - 16847902 AGCTG--AGGCCTC--GCCTTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343937 18 + 91754291 AGCTG--AGGCCTC--GCCTTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410111 18 + 1977891 AGCTG--AGGCCTC--GCCTTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349201 18 - 7796314 AGCTG--AGGCCTC--GCCTTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73823913 18 + 74750902 AGCTG--AGGCCTC--ACCTTG i calJac3.chr17 I 4 C 0 s saiBol1.JH378146 17270492 18 - 17725628 AGCTG--AGGCCTC--GCCTTG i saiBol1.JH378146 I 4 C 0 s cebCap1.NW_016107444v1 6359368 18 + 6778120 AGCTG--AGGCATC--ACCTTG i cebCap1.NW_016107444v1 I 4 C 0 s aotNan1.NW_018503669v1 6588 18 + 69927 AGCTG--AGGCCTC--GCCTTG i aotNan1.NW_018503669v1 I 4 C 0 s micMur3.chr1 88378865 17 + 114275543 AGCTG--AGGCCTC--GCCCA- i micMur3.chr1 I 23 C 0 s otoGar3.GL873829 200452 18 + 608964 AGCTG--AGGCCTC--GCCCCA i otoGar3.GL873829 I 4 C 0 s mm10.chr16 32782013 20 + 98207768 AATTGTAAGGCCCT--GTCCCA i mm10.chr16 I 2 C 0 s canFam3.chr33 2313953 18 - 31377067 GGCTG--AGGCCTG--GCCCCA i canFam3.chr33 I 4 C 0 s dasNov3.JH569502 2692452 17 - 6579706 AGCTG--AGGGCTCAGGCC--- i dasNov3.JH569502 I 4 C 0 e proCoq1.NW_012133858v1 14788031 52 - 22200726 I e nomLeu3.chr11 2835671 0 - 123690457 C a score=1058514.000000 s hg38.chr3_KI270934v1_alt 47559 78 + 163458 AAGGGGCAGCTGTGGCCTAGGCTACCTCAAGACTCACCTCATCCTTA-CCGCACATTT-AA----GGCGCCATTGCTTTTGGGA s panTro5.chr3 2519783 78 - 202621043 AAGGGGCAGCCGTGGCCTAGGCTACCTCAAGACTCACCTCATCCTTA-CCGCACATTT-AA----GGCGCCATTGCTTTTGGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107984 78 - 190779 AAGGGGCAGCCGTGGCCTAGGCTACCTCAAGACTCACCTCATCCTTA-CCGCACATTT-AA----GGCGCCATTGCTTTTGGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60812 78 - 106623 AAGGGGCAGCTGTGGCCTAGGCTACCTCAAGACTCACCTCATCCTTA-CTGCACATTT-AA----GGCGCCATTGCTTTTGGGA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2333353 78 - 204787373 AAGGGACAGCTGTGGTCTAGGCTACCTCAAGACCCACCCCATCCTCA-CCGCACACTT-AA----GGCGCCATTGCTTTTGGGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398517 78 - 192460366 AAGGGACAGCTGTGGTCTAGGCTACCTCAAGACCCACCCCATCCTCA-CCGCACACTT-AA----GGCGCCATTGCTTTTGGGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19137974 78 - 19675229 AAGGGACAGCTGTGGTCTAGGCTACCTCAAGACCCACCCCATCCTCA-CCGCACACTT-AA----GGCGCCATTGCTTTTGGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371038 78 - 16847902 AAGGGACAGCTGTGGCCTAGGCTACCTCAAGACCCACCCCATCCTCA-CCGCACACTT-AA----GGCGCCATTGCTTTTGGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91343955 78 + 91754291 AAGGGACAGCTGTGGCCTAGGCTACCTCAAGACCCACCCCATCCTCA-CCGCACACTT-AA----GGCGCCATTGCTTTTGGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410129 78 + 1977891 AAGGGACAGCTGTGGCCTAGGCTACCTCAAGACCCACCCCATCCTCA-CCGCACACTT-AA----GGCGCCATTGCTTTTGGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349219 78 - 7796314 AAGGGGCAGCTGTGGCCTAGGCTACCTCAAGACCCACCCCATCCTCA-CCACACACTT-AA----GGTGCCATTGCTTTTAGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73823931 77 + 74750902 AAGGGGCAGCTGTGA-CTAGGATACCTTAAGACCCACCCCGTCCTCA-CCACACACCT-AA----GATGCCATTGCTTTTGGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17270510 78 - 17725628 AAGGGGCAGCTGTGGCCTAGGGTACCTCAAGACCCACCCCATCCTCA-CCACACACCT-AA----GACGCCATTGCTTTTGGGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6359386 76 + 6778120 AAGGGGCAGCTGTGGCCTAGGATACCTCAAGACCCACCCCGTCCTCA-CCACACACCT-AA----GATGCCATTGCTTTT--GA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 6606 78 + 69927 AAGGGGCAGCTGTGGCCCAGGATACCTCAAGACCCTCCCCATCCTCA-CCACACACCT-AA----GACGCCATTGCTTTTGGGA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88378882 78 + 114275543 AAGGGACAGCTGTGGCCTAGGATACCTCAGGGCCCACCCCATCCTCG-CCGCACACTT-CA----GGAGCCATTGCTTTGCGGA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14788083 78 - 22200726 AAGGGACAGCTGTGGCCTAGGATACCTCAGGACCCAGCCCATCCTCA-CCGCACACCT-CA----GGAGCCATTGCTTTGGGGA i proCoq1.NW_012133858v1 I 52 I 131 s otoGar3.GL873829 200470 77 + 608964 AGGGGACGCCTGTGACCTAGGATACCTCAGAACTCGTCCCAGCATCA-CTGCACACTT-AA----GG-GCTGTTGCTTTGGGGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32782033 59 + 98207768 GATGGGCAGCTGC-ACCTAGG--ACCTCGGGACCCATCCC----------------TC-AG----TCTGCCCCTGCTCTGTGG- i mm10.chr16 C 0 C 0 s canFam3.chr33 2313971 83 - 31377067 AAGGGGCAGCTGTGACCTAGGATACCTCAGGACCCACCCCAGCCTCACCCACACACTT-GCAGGTGGCACCGATCCTTTGAGGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2692469 79 - 6579706 ACCGGGCCGCTGTGGCTCAGGACACCTCAGAGCCCACCTCAAACCCAGCCACGGACTTCCA----GGCGCCA-TGCTTCGGGGA i dasNov3.JH569502 C 0 C 0 e nomLeu3.chr11 2835671 0 - 123690457 C a score=483672.000000 s hg38.chr3_KI270934v1_alt 47637 40 + 163458 GACTGGAAAAGG----------GAAGGTGACTGAAGGCTG-TCAGGATTCT s panTro5.chr3 2519861 40 - 202621043 GACTGGAAAAGG----------GAAGGTGACTGAAGGCTG-TCAGGATTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108062 40 - 190779 GACTGGAAAAGG----------GAAGGTGACTGAAGGCTG-TCAGGATTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60890 40 - 106623 GACTGGAAAAGG----------GAAGGTGACTGAAGGCTG-TCAGGATTCT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2333431 40 - 204787373 GACTGGAAAAGG----------GAAGGTGACTGAAGGCTG-TCAGGATTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398595 40 - 192460366 GACTGGAAAAGG----------GAAGGTGACTGAAGGCTG-TCAGGATTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19138052 40 - 19675229 GACTGGAAAAGG----------GAAGGTGACTGAAGGCTG-TCAGGATTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371116 40 - 16847902 GACTGGAAAAGG----------GAAGGTGACTGAAGGCTG-TCAGGATTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91344033 40 + 91754291 GACTGGAAAAGG----------GAAGGTGACTGAAGGCTG-TCAGGATTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410207 40 + 1977891 GACTGGAAAAGG----------GGAGGTGACTGAAGGCTG-TCAGGATTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349297 40 - 7796314 GACTGGAAAAGG----------GAAGGTGACTGAAGGCTG-TCAGGATTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73824008 40 + 74750902 GACTGGAAAAGG----------GAAGGTGACTGAAGACTA-CTGGGATTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17270588 40 - 17725628 GACTGGAAAAGG----------GAAGGTGACTGAAGACTA-CTGGGATTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6359462 40 + 6778120 GACTGGAAAAGG----------GAAGGTGACTGAAGACTG-CTGGGATTCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 6684 40 + 69927 GACTGGAAAAGG----------GAAGGTGACTGAAGACTC-CTGGGATTCT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88378960 38 + 114275543 GGC--GGAAGGG----------GAAGGTGACTGAAGATGA-TCGGGATTCT i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 200547 38 + 608964 GAC--GAAAGGG----------GAAGGTGACTGATAATGA-CCCGGATTCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32782092 41 + 98207768 GACTGGAAAGGGCCTGCGGCATGAAGATGATTTGAGACTC-T--------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2314054 38 - 31377067 GACTCAGAA-------------AAATGTGCTTAAAGGTGACTCAGGATTCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2692548 44 - 6579706 GACTGGAAAAGGGAA-------GAAGATGATTGAAGACAATTCAGGATTCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14788161 131 - 22200726 I e nomLeu3.chr11 2835671 0 - 123690457 C a score=218500.000000 s hg38.chr3_KI270934v1_alt 47677 16 + 163458 TCAAGGAGAATGAATA s panTro5.chr3 2519901 16 - 202621043 TCAAGGAGAATGAATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108102 16 - 190779 TCAAGGAGAATGAATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60930 16 - 106623 TCAAGGAGAATGAATA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835671 16 - 123690457 TCAAGGAGAATGAATA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2333471 16 - 204787373 ACAAGGGGAGTGAATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398635 16 - 192460366 ACAAGGGGAGTGAATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19138092 16 - 19675229 ACAAGGGGAGTGAATA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371156 16 - 16847902 ACAAGGGGAGTGAATA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91344073 16 + 91754291 ACAAGGGGAGTGAATA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410247 16 + 1977891 ACAAGGGGAGTGAATA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349337 16 - 7796314 ACAAGGGGAGTGAATA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73824048 16 + 74750902 TCAAGGAGAATGAATA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17270628 16 - 17725628 TCAAGGAGAATGAATA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6359502 16 + 6778120 TCGAGGAGAATGAATA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 6724 16 + 69927 TCAAGGAGAATGAATA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88378998 16 + 114275543 TCAAAGAGAATGAATA i micMur3.chr1 C 0 I 187 s otoGar3.GL873829 200585 16 + 608964 TCAAGGAGAATGAATA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32782133 12 + 98207768 TCAA---GAGTGAAT- i mm10.chr16 C 0 C 0 s canFam3.chr33 2314092 15 - 31377067 TCAAGGA-AATACATA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2692592 16 - 6579706 TCAAGGAGCATGAATA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14788161 131 - 22200726 I a score=976904.000000 s hg38.chr3_KI270934v1_alt 47693 106 + 163458 CTGGGAATCAAGACAAGACTATACCTT-ATCCATAGGCGCAGGTGC--ACAGGGGGAGGCCATAAAGATCAAACATGC--ATGGATGGGTCCTCACGCAGACACACCCACA s panTro5.chr3 2519917 106 - 202621043 CTGGGAATCAAGACAAGACTATACCTT-ATCCATAGGCGCAGGTGC--ACAGGGGGAGGCCATAAAGATCAAACATAC--ATGGATGGGTCCTCACGCAGACACACCCACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108118 106 - 190779 CTGGGAATCAAGACAAGACTATACCTT-ATCCATAGGCGCAGGTGC--ACAGGGGGAGGCCATAAAGATCAAACATAC--ATGGATGGGTCCTCACGCAGACACACCCACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 60946 106 - 106623 CTGGGAATCAAGACAAGACTATACCTT-ATCCATAGGCGCAGGTGC--ACAGGGGGAGGCCATAAAGATCAAACATGC--ATGGATGGGTCCTCACGCAGACACACCCACA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835687 96 - 123690457 CTGGGAATCAAGACAAGAC-----------CCACAGGCACAGGTGC--ACAGGGGGAGGCCATAAAGATCAAACATGC--ATGGATGGGTCCTCACGCAGACACACCCACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2333487 101 - 204787373 CTGGGACTCAAGACAAGACTATACCTT-ATCCATAGGCTCAGGTGC--ACAGGGGGAGGCCATAATG-----ACAAGC--ATGGAGGGGTCCTCACGCAGACACCCCCACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398651 101 - 192460366 CTGGGACTCAAGACAAGACTATGCCTT-ATCCATAGGCTCAGGTGC--ACAGGGGGAGGCCATAATG-----ACAAGC--GTGGAGGGGTCCTCACGCAGACACCCCCACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19138108 101 - 19675229 CTGGGACTCAAGACAAGACTATGCCTT-ATCCATAGGCTCAGATGC--ACAGGGGGAGGCCATAATG-----ACAAGC--GTGGAGGGGTCCTCACGCAGACACCCCCACA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371172 105 - 16847902 CTGGGACTCAAGACAAGACTATACCTT-ATCCATAGGCTCAGGTGC--ACAGGGGGAGGCCATAAAGA-CAAACAAGC--GTGGAGGGGTCCTCACGCAGACGCCCCCACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91344089 101 + 91754291 CTGGGACTCAAGACAAGACTATACCTT-ATCCATAGGTTCAGGTGC--ACAGGGGGAGGCCATAATG-----ACAAGC--GTGGAGGGGTCCTCACGCAGACACCCCCACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410263 105 + 1977891 CTGGGACTCAAGACAAGACTATACCTT-ATCCATAGGCTCAGGTGC--ACAGGGGGAGGCCTTAAAGA-CAAACAAGC--GTGGAGGGGTCCTCACGCAGACGCCCCCACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349353 106 - 7796314 CTGGGAATGAAGACAAGACTAGACCTTAATCCATCGGCGCAGGTGC--ATAGGCGGAGGCCATAAAGA-CAAACAAGC--GTGGATGGGTCCTCACGCAGACACCCCCACA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73824064 105 + 74750902 CCGGGAATCAAGACAAGACTACGCCTT-GTGGGTAGGCGCAGGGAC--ACATGGGGAGGCCATAAGGATCCAGTG-GC--ATGGATGGGTCCTCACACAGACACACCCACA i calJac3.chr17 C 0 I 5 s saiBol1.JH378146 17270644 105 - 17725628 CTGGGCCTCAAGACAAGACTATGCCTT-GTGGGTAGGCGCAGGGGC--ACATGGGGAGGCCATAAGGACCAAACGTGC--AT-GATGGGTCCTCACACAGACACACCCACA i saiBol1.JH378146 C 0 I 6 s cebCap1.NW_016107444v1 6359518 105 + 6778120 CTGGGCCTCAAGACAAGACTGTGCCTT-GTGGGTAGGCGCAGGGGC--ACACGGGG-GGCCATAAGGACCAAACGTGC--ATGGATGGGTCCTCACACGGACACACCCACA i cebCap1.NW_016107444v1 C 0 I 578 s aotNan1.NW_018503669v1 6740 106 + 69927 CTGGGAATCAAGACAAGACTATGCCTT-GGGGGTAGGCGCAGGGGC--ACATGAGGAGGCCATAAGGACCAAACGTGC--ATGGATGGGTCCTCACACAGACACACCCACA i aotNan1.NW_018503669v1 C 0 I 429 s otoGar3.GL873829 200601 105 + 608964 ATGGGAATAAAGATAAGACTACTCCAT-GTCAGTAGGCATAGGCGC--ACAGGAAGAGGCCATGGAGAACAAATACACTAACGGATGGGTCTTCACACAGCCACGCAG--- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32782145 97 + 98207768 ----------AAACCAGACTCTACCTG-TTTAGTAGAC-TGGGGGT--ACAGGAAAAGGCCATGGTGGCCAAATATACAGATGGATGGGTTCCTACACAGATATATCAGGA i mm10.chr16 C 0 I 1 s canFam3.chr33 2314107 95 - 31377067 ---ATAATAAAGACAAGACCACACCTT-CTCAGTCAATACAGAGACAGACAGGAAGGAGCCATAAAGA---------C--CCGGATGAATTCTCTCACAGATGTACCCAC- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2692608 43 - 6579706 ----------------------------AAGGCTAGACAGAGGTGC--AGAGGAAGAGGCCAC---------ACAGGC--ATGG--------------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14788161 131 - 22200726 I e micMur3.chr1 88379014 187 + 114275543 I a score=125644.000000 s hg38.chr3_KI270934v1_alt 47799 14 + 163458 GAAGGACACTAGCC s panTro5.chr3 2520023 14 - 202621043 GAAGGACACTAGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108224 14 - 190779 GAAGGACACTAGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61052 14 - 106623 GAAGGACACTAGCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835783 14 - 123690457 GAAGGACACTAGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2333588 14 - 204787373 GAAGGACACTGGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398752 14 - 192460366 GAAGGACACTGGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19138209 14 - 19675229 GAAGGACACTGGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371277 14 - 16847902 GAAGGACACTGGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91344190 14 + 91754291 GAAGGACACTGGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410368 14 + 1977891 GAAGGACACTGGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349459 14 - 7796314 GAAGGACACTGGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73824174 12 + 74750902 --AGGACACTGGCC i calJac3.chr17 I 5 C 0 s saiBol1.JH378146 17270755 14 - 17725628 GGAGGACACTGGCC i saiBol1.JH378146 I 6 I 207 s otoGar3.GL873829 200706 10 + 608964 GAAAGACACT---- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32782243 13 + 98207768 GGAGGATATTGCT- i mm10.chr16 I 1 I 4 s canFam3.chr33 2314202 13 - 31377067 -AAGGATACCGATC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14788161 131 - 22200726 I e aotNan1.NW_018503669v1 6846 429 + 69927 I e micMur3.chr1 88379014 187 + 114275543 I e dasNov3.JH569502 2692651 0 - 6579706 C e cebCap1.NW_016107444v1 6359623 578 + 6778120 I a score=49377.000000 s hg38.chr3_KI270934v1_alt 47813 18 + 163458 TGTGCACGC-----GCGCGTG------------------------ca s panTro5.chr3 2520037 18 - 202621043 TGTGCACGT-----GCGCGTG------------------------ca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108238 18 - 190779 TGTGCACGT-----GCGCGTG------------------------ca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61066 22 - 106623 TGTGCACGC-----GCGCGTGc--------------------ataca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835797 18 - 123690457 TGTGCACGC-----GTGCGTG------------------------CG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2333602 26 - 204787373 TGTGCACGC-----GTGCGCGcacat----------------acata i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398766 26 - 192460366 TGTGCACGC-----GTGCGCGcacat----------------acaca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19138223 21 - 19675229 TGTGCACGC-----GTGCGCGcacat--------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371291 38 - 16847902 TGTGCACGC-----GTGCGCGcacatac----acacacacacacaca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91344204 28 + 91754291 TGTGCACGC-----GTGCGTGcacat--------------acacaca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410382 22 + 1977891 TGTGCACGC-----GTGCGCG--------------------CGCGca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349473 42 - 7796314 TGTGCACGC-----GTGCGCGcacacacgcatacacacacacacaca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73824186 18 + 74750902 TGTGcacgc-----acgcacaca------------------------ i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17270976 18 - 17725628 tgtgcacac-----acgcacaca------------------------ i saiBol1.JH378146 I 207 C 0 s otoGar3.GL873829 200716 13 + 608964 ---GCGCGC-----GCGCGCA-------------------------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32782260 23 + 98207768 TATGAATGCAGACTGTGTGTGCA------------------------ i mm10.chr16 I 4 C 0 s dasNov3.JH569502 2692651 17 - 6579706 -GTTCACAC-----ACGCGCACA------------------------ i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14788161 131 - 22200726 I e aotNan1.NW_018503669v1 6846 429 + 69927 I e micMur3.chr1 88379014 187 + 114275543 I e cebCap1.NW_016107444v1 6359623 578 + 6778120 I e canFam3.chr33 2314215 0 - 31377067 C a score=214014.000000 s hg38.chr3_KI270934v1_alt 47831 16 + 163458 cacacacacacacaca s panTro5.chr3 2520055 16 - 202621043 cacacacacacacaca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108256 16 - 190779 cacacacacacacaca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61088 16 - 106623 cacacacacacacaca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835815 16 - 123690457 TACACACACACACACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2333628 16 - 204787373 cacacacacacacaca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398792 16 - 192460366 cacacacacacacaca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19138244 13 - 19675229 ---acacacacacaca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371329 16 - 16847902 cacacacacacacaca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91344232 16 + 91754291 cacacacacacacaca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410404 16 + 1977891 cacacacacacacaca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349515 16 - 7796314 cacacacacacacaca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73824204 16 + 74750902 tgcacacatacacaca i calJac3.chr17 C 0 I 118 s saiBol1.JH378146 17270994 16 - 17725628 tgcacacacgcaTGCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6360201 16 + 6778120 cacacacacacacGCC i cebCap1.NW_016107444v1 I 578 C 0 s proCoq1.NW_012133858v1 14788292 14 - 22200726 --CACACACACACACA i proCoq1.NW_012133858v1 I 131 I 2 s otoGar3.GL873829 200729 12 + 608964 ----CACACACACACA i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32782283 16 + 98207768 TACACACACACACACA i mm10.chr16 C 0 I 2 s canFam3.chr33 2314215 14 - 31377067 --CACAAACACACACA i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 2692668 16 - 6579706 CTCAGACGTACGCACC i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 6846 429 + 69927 I e micMur3.chr1 88379014 187 + 114275543 I a score=130890.000000 s hg38.chr3_KI270934v1_alt 47847 15 + 163458 A--GAGTTCAT-AATGTG s panTro5.chr3 2520071 17 - 202621043 AAAGAGTTCAT-AATGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108272 17 - 190779 AAAGAGTTCAT-AATGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61104 17 - 106623 AAAGCGTTCAT-AATGTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835831 17 - 123690457 AAAGAGTCCAT-AATGCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2333644 17 - 204787373 cCAGAGTTCAT-AATGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398808 17 - 192460366 cCAGAGTTCAT-AATGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19138257 17 - 19675229 cCAGAGTTCAT-AATGCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371345 17 - 16847902 cCAAAGTTCAT-AATGCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91344248 17 + 91754291 cTAGAGTTCAT-AATGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410420 17 + 1977891 cCAAAGTTCAT-AATGTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349531 17 - 7796314 cCAGAGTTCAT-AATGCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73824338 15 + 74750902 --AGATTTCAT-CATGCA i calJac3.chr17 I 118 C 0 s saiBol1.JH378146 17271010 15 - 17725628 --AGGTTTCAT-CATGCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6360217 15 + 6778120 --AGATTTCAT-CATGCA i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14788308 15 - 22200726 --AGAGTTAAT-AATGGG i proCoq1.NW_012133858v1 I 2 C 0 s otoGar3.GL873829 200742 15 + 608964 --AGAATTAAT-AATGGG i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32782301 16 + 98207768 --AGAGTTAATGGATGTG i mm10.chr16 I 2 C 0 s canFam3.chr33 2314231 15 - 31377067 --AGAGTTACT-AATGGG i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 2692684 12 - 6579706 --GGAGTTAAT-GAA--- i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 6846 429 + 69927 I e micMur3.chr1 88379014 187 + 114275543 I a score=17757.000000 s hg38.chr3_KI270934v1_alt 47862 2 + 163458 GT s panTro5.chr3 2520088 2 - 202621043 GT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108289 2 - 190779 GT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61121 2 - 106623 GT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835848 2 - 123690457 GT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2333661 2 - 204787373 GT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398825 2 - 192460366 GT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19138274 2 - 19675229 GT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371362 2 - 16847902 GT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91344265 2 + 91754291 GT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410437 2 + 1977891 GT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349548 2 - 7796314 GT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73824353 2 + 74750902 GG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17271025 2 - 17725628 GG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6360232 2 + 6778120 GG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88379201 2 + 114275543 GT i micMur3.chr1 I 187 C 0 s proCoq1.NW_012133858v1 14788323 2 - 22200726 GT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 200757 2 + 608964 AT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32782317 2 + 98207768 AC i mm10.chr16 C 0 C 0 s canFam3.chr33 2314246 2 - 31377067 CT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2692696 2 - 6579706 GT i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 6846 429 + 69927 I a score=1725446.000000 s hg38.chr3_KI270934v1_alt 47864 117 + 163458 GATGGCCCTAAGTTAAG---CAAAATGCTTCTGCACAC-AAAA-CTCTCTGGTTTACTTCAAATT-AACTCTATTTAAATAAAGTCTCTCTGACTTTTTGT-GTCTTCAAAACCAGGAATTCCA s panTro5.chr3 2520090 113 - 202621043 GATGGCCCTAAGTTAAG---CAAAATGCTTCTGCACAC-AAAA-CTCTCTGGTTTACTTCAAATC-AACTCTATTTAAATAAAGTCT----GACTTTTTGT-GTCTTCAAAACCAGGAATTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108291 113 - 190779 GATGGCCCTAAGTTAAG---CAAAATGCTTCTGCACAC-AAAA-CTCTCTGGTTTACTTCAAATC-AACTCTATTTAAATAAAGTCT----GACTTTTTGT-GTCTTCAAAACCAGGAATTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61123 117 - 106623 GATGGCCCTAAGTTAAG---CAAAATGCTTCTGCACAC-AAAA-CTCTCTGGTTTACTTCAAATT-AACTCTATTTAAATAAAGTCTCTCTGACTTTTTGT-GTCTTCAAAACCAGGAATTCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835850 114 - 123690457 GATGGCCCTAAGTTAAG---CAAAATGCTTCTGCACAC-AAAA-CTCTCTGGTTTACTTCAAATTAAACTCTATT----TAAAGTCTCTCTGACTTTTTGT-GTCTTCAAAACCAGGAATTCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2333663 116 - 204787373 GATGGCCCTAAGTTAAG---CAAAATATTTCTGCACAC-AAAA-CTCTCTGGTTTACTTCGAATTAAAGTCTATTTAA-TAAAG-CTGTCTAACTTTTTGT-GTCTTCAAAACCAGAGATTCTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398827 116 - 192460366 GATGGCCCTAAGTTAAG---CAAAATATTTCTGCACAC-AAAA-CTCTCTGGTTTACTTCGAATTAAAGTCTATTTAA-TAAAG-CTGTCTAACTTTTTGT-GTCTTCAAAACCAGAGATTCTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19138276 116 - 19675229 GATGGCCCTAAGTTAAG---CAAAATATTTCTGCACAC-AAAA-CTCTCTGGTTTACTTCGAATTAAAGTCTATTTAA-TAAAG-CTGTCTAACTTTTTGT-GTCTTCAAAACCAGAGATTCTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371364 116 - 16847902 GATGGCCCTAAGTTAAG---CAAAATATTTCTGCACAC-AAAA-CTCTCTGGTTTACTTCGAATTAAAGTCTATTTAA-TAAAG-CTGTCTAACTTTTTGT-GTCTTCAAAACCAGGGATTCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91344267 116 + 91754291 GATGGCCCTAAGTTAAG---CAAAATAATTCTGCACAC-AAAA-CTCTCTGGTTTACTTCGAATTAAAGTCTATTTAA-TAAAG-CTGTCTAACTTTTTGT-GTCTTCAAAACCAGGGATTCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410439 116 + 1977891 GATGGCCCTAAGTTAAG---CAAAATATTTCTGCACAC-AAAA-CTCTCTGGTTTACTTCGAATTAAAGTCTATTTAA-TAAAG-CTGTCTAACTTTTTGT-GTCTTCAAAACCAAGGATTCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349550 116 - 7796314 GATGGCCCTAAGTTAAG---CAAAATGTTTCTGCACAC-AAAA-CTTTCTGGTTTACTTCGAATTCAAGTCTATTTAA-TAAAG-CTGTCTAACTTTTTGT-GTCTTCAAAACCAGGGATTCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73824355 119 + 74750902 GATGGCTCTAAGTTAAC---CAGAATGCTTCCGCACAT-AAAA-TTCTCTGGTTTACTTCTAATTAAAGTCTATTTAAATGAAGTCCCTCTGTCTTTTTTTTGTGTTCAGAAGCAGGGATTCTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17271027 119 - 17725628 GATGGCTCTAAGTTAAC---CAAAAGGCTTCTGCACAC-AAAA-CTCTCTGGTTTACTTCTAATTAAAGTCTATTTAAATAAAGTCCCTCTGACTTTCTTTGGTCTTCAAACGCAGGGATTCTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6360234 118 + 6778120 GATGGCTCTAAGTTAAC---CAAAATGCTTCTGCACAC-AAAA-TTCTCTGGTGTACTTCTAATTAAAGTCTATTTAAATAAAGTCCCTCTGACTTTTTTT-GTCTTCAAACGCAGGGATTCTA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 7275 118 + 69927 GATGGCTCTAAGTTAAC---CAAAATGCTTCTGCACAC-AAAA-TTCTCTGGTTTACTTCTAATTAAAGTCTATTTAAATAAAGTCCCTCTGACTTTTTTT-GTCTTCAAAAGCAGGGATTCTA i aotNan1.NW_018503669v1 I 429 C 0 s micMur3.chr1 88379203 116 + 114275543 GATAGCCTTAATTTAAG---CACAGTGCTTCTGCACAC-AAAA---CTCTGGTTTACTTCTAATTAAAGTCTATTTAAATAAAGTCCCTCTGACTTTTTGT-GTCTTCAAAGCCATGGATTCCA i micMur3.chr1 C 0 I 133 s proCoq1.NW_012133858v1 14788325 116 - 22200726 GATAGCCCTAAGTTAAG---CACAATGCTTCTGCACAC-AAAA---CTCTGGTTTACTTCTAATTAAAGTCTATTTAAATAAAGTCCCTCTGACTTTTTGT-GTCGTCAAAACCATGGATTCCA i proCoq1.NW_012133858v1 C 0 I 133 s otoGar3.GL873829 200759 117 + 608964 GATAACTGTAAGTTAAC---TAAAATGCTTCTGCACACAAAAA---CTCTGGTTTACTTCTAACTAAAGTCTATTTAAATGAAGTCCCTCTGACTTTTTGT-GTCTTCAAAGCCATGGATTCTA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32782319 109 + 98207768 --TGGCTTTACATTTAC---CAAGATGTTTTTACATAT-AACA-----CAGGCTTACTTCTCATTAAAATCTATTTAAATAAAG--TCTCTATCTTTTTAT-GTCTTCAAA-CTATGGATTCCA i mm10.chr16 C 0 C 0 s canFam3.chr33 2314248 120 - 31377067 GATGGCTCCAAGTTAAAAGCCAAAATTCATCTGTATAA-AAAAACCCTCCAGTTTCCTTCTAGTTGAAGTCTATTTAAGTAAAATCCTTCTGACTT--TGT-GTTTCCAAAGCTGTGAATTCCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2692698 121 - 6579706 GATGGCTCTAAGTTAAAAACCAAAATATTTTTGCACAC-AAAA-CTCTCTTGTTTACTTCTAATTAAAATCTATTTAAATAAAGTCCCTCTGACTTTTTGT-GTCTCCAGAGCCATGAACTCCA i dasNov3.JH569502 C 0 C 0 a score=1706205.000000 s hg38.chr3_KI270934v1_alt 47981 172 + 163458 TTCCTGATTTTCTTCTGGTGGCCGAAGGGCTGGACACAGA--C--TTCTCCCAACCATCAGAGGGCACAGAGTGTGGAGGTTAAGTGCTGG-GCAG-CAGTGGAGCATTAGGGGCAGCTGG----ATCCAGTCCTA-ATCAGCCC--CGTTAC-CCATGCTGGAAACCCTCAGTTGCTCCACCCCA s panTro5.chr3 2520203 173 - 202621043 TTCCTGATTTTCTTCTCGTGGCCGAAGGGCTGGACACAGG--C--TTCTCCCAACCATCAGAGGGCACAGCGTGTGGAGGTTAAGTGCTGG-GCAGGCAGTGGAGCATTAGGGGCAGCTGG----ATCCAGTCCTA-ATCAGCCC--GGTTAC-CCATGCTGGAAACCCTCAGTTGCTCCACCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108404 173 - 190779 TTCCTGATTTTCTTCTCGTGGCCGAAGGGCTGGACACAGG--C--TTCTCCCAACCATCAGAGGGCACAGAGTGTGGAGGTTAAGTGCTGG-GCAGGCAGTGGAGCATTAGGGGCAGCTGG----ATCCAGTCCTA-ATCAGCCC--GGTTAC-CCATGCTGGAAACCCTCAGTTGCTCCACCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61240 173 - 106623 TTCCTGATTTTCTTCTGGTGGCCGAAGGGCTGGACACAGG--C--TTCTCCCAACCATCAGAGGGCACAGAGTGTGGAGGTTAAGTGCTGG-GCAGGCAGTGGAGCAGTAGGGGCAGCTGG----ATCCAGTCCTA-ATCAGCCC--GGTTAC-CCATGCTGGAAACCCTCAGTTGCTCCACCCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2835964 173 - 123690457 TTCCTGATTTTCTTCTGGTGGCTGAAGGGCTGGGCACAGG--C--TTCTCCCAACCATCAGAGGGCACCGAGTGTGGAGGTTAAGTGCTGG-GCAGGCGGTGGAGCAGTAGGGGCAGCTGG----ATCCAGTCCTA-ATCAGCCT--GGTCAC-CCATGCTGGAAGCCCTCAGTTGCTCCACCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2333779 172 - 204787373 TTCCTGATTTTCTTCTGGTGGCCGAAGGGCTGGGCACAGG--C--TTCTCCCAACCATCCGAGGGCACAGTGTGTGGAGGTTAAGTGTTGG-GCAGGCGGTGGAGCAGT-GGGGCAGCTGG----ATCCAGTCCTA-ATCAGCCC--GGTCAC-CCATGCTGGAAATCCTCAGTTGCTCCACCCTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192398943 172 - 192460366 TTCCTGATTTTCTTCTGGTGGCCGAAGGGCTGGGCACAGG--C--TTCTCCCAACCATCCGAGGGCACAGTGTGTGGAGGTTAAGTGTTGG-GCAGGCGGTGGAGCAGT-GGGGCAGCTGG----ATCCAGTCCTA-ATCAGCCC--GGTCAC-CCATGCTGGAAATCCTCAGTTGCTCCACCCTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19138392 172 - 19675229 TTCCTGATTTTCTTCTGGTGGCCGAAGGGCTGGGCACAGG--C--TTCTCCCAACCATCCGAGGGCACAGTGTGTGGAGGTTAAGTGTTGG-GCAGGCGGTGGAGCAGT-GGGGCAGCTGG----ATCCAGTCCTA-ATCAGCCC--GGTCAC-CCATGCTGGAAATCCTCAGTTGCTCCACCCTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371480 173 - 16847902 TTCCTGATTTTCTTCTGGTGGCCGAAGGGCTGGGCACAGG--C--TTCTCCAAACCGTCAGAGGGCACAGTGTGTGGAGGTTAAGTGTTGG-ACAGGCAGTGGAGCAGTAGGGGCAGCTGG----ATCCAGTCCTA-ATCAGCCA--GGTCAC-CCACGCTGGAAATCCTCAGTTGCTCCACCCTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91344383 173 + 91754291 TTCCTGATTTTCTTCTGGTGGCCAAAGGACTGGGCACAGG--C--TTCTCCCAACCGTCCGAGGACACAGTGTGTGGAGGTTAAGTGTTGG-GCAGGCAGTGGAGCAGTAGGGGCAGCTGG----ATCCAGTCCTA-ATCAGCCC--GGTCAC-CCATGCTGGAAATCCTCAGTTGCTCCACCCTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410555 173 + 1977891 TTCCTGATTTTCTTCTGGTGGCCGAAGGGCTGGGCACAGG--C--TTCTCCAAACTGTCAGAGGGCACAGTGTGTGGAGGTTAAGTGTTGG-ACAGGCAGTGGAGCAGAAGGGGCAGCTGG----ATCCAGTCCTA-ATCAGCCA--GGTCAC-CCATGCTGGAAATCCTCAGTTGCTCCACCCTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349666 173 - 7796314 TTCCTGATTTTTTTCTGGTGCCCGAAGGGCTGGTCACAGG--C--TTCTTCCAACCATCAGAGGGCACAGTGTGTGGAGGTTAAGTGTTGG-ACAGGCGGTGGAGCAGTAGGGTCAGCTGG----ATCCAGCCCTA-ATCAGCCC--GGTCAC-CCATGCTGGAAATCCTCAGTTGCTCCATTCTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73824474 168 + 74750902 TTCCTGATTTTCTTCTGGTGGCCAAAGGGCTGGGCACAGG--C--TTCTCCCAACA----GAGGGTGCAGGGTGTGGAGGTGGTGTGTTGG-GCAGGTGGTAGAGTAGTAGGGGCAGCTGG-----TCCAGCCCTG-GTCAGCCCTTGGTTAG-CCATGTTGGAAATCCTCCATTGCTC--CCCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17271146 171 - 17725628 CTCCTGATTTTCTTCTGGTGGCCAAAGGGCTGAACACAGG--C--TTCTCCCAACCATCTGAGGGCACAGGGTGTGGAGGTGGCGTGCTGG-GCAGGTGGTAGAGGAGTGGGGGCAGCTGG-----TCCAGCCCTG-GTCAGCCATTGGTTAC-CCATGTTGGAAATCCTCCGCTGCT---CCCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6360352 169 + 6778120 TTCCTGATTTTCTTCTGGTGGCCAAAGGGCTGGGCACAGG--C--TTCTCCCCACCATCAGAGGGCACAGGGTGTGGAGGTGGCGTGTTGG-GCAGATGGTAG---AGTAGGAGCAGCTGG-----TCCAGCCCTG-GTCAGCCCTTGGTTAC-CCATGTTGGAAATCCTCCCTTGCTC--CCCCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 7393 172 + 69927 TTCCTGATTTTCTTCTGGTGGCCAAAGGGCTGGGCACAGG--C--TTCTCCCAACCATCAGAGGGCACAGGGTGTGGAGGTGGCGTGTTGG-GCAGGTGGTGGAGGAGTAGGCGCAGCTGG-----TCCAGCCCTG-GTCAGCCCTTGGTTAC-CCATGTTGGAAATCCTGCGTTGCTC--CCCCA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 200876 146 + 608964 -CTCTGATTTTTTTCTGGTGGCTGAAGAGCTAG--ACAGG------TCTCCCAACCGTGGGAAGGCACAGGGTG----------GTGGGAG-ACAG--------------GGGAGGGCTGG----ATCCAGTCCTA-ATCAGCTCTCAGTTACTTCATGTTGGAAAT-CTCAGTTGCTCCAATTCT i otoGar3.GL873829 C 0 I 7 s mm10.chr16 32782428 178 + 98207768 -TACCAGGTTTCTTCTGGTGGCTGTAGTGTTAGGCACAGC--ACGTTCTTCCATTCCTCATAA-ACATAGT-TGTGACAGTTGCATATTAG-GGAGGGTGGGGGGTGGAAAATTCAGATGGTGGAGCCCAGCCCTACGACAGCTCCCGGCTGCCCCATGCTGCTG--CATCGGTGGCCACAACGCT i mm10.chr16 C 0 C 0 s canFam3.chr33 2314368 105 - 31377067 CTGGTGATTTTCCTTGTGTGGCTGACAGGCTAGGTACAGG--G-------------------------------------------------------AGCGGAGGGGAGAGGTGGGTTGG----AACCAGCCACG-GTC-----------------TGTTGGGAAGCTT--GTTGCTCCAGCCCA i canFam3.chr33 C 0 I 6 s dasNov3.JH569502 2692819 167 - 6579706 TTGATGATTTTCCTCTGGTGACTGGAGG--TGAGCACAGGGTC--CTTTCCTCAGCCGCAGACAGCACAGGGTG-GGGGATTAAGTGTGGGTGTGTGGCGAGGAGCAGTGT-----GCTGA----AT-CAGTCCTG-CTC-GCTC--AGTCACTCGGTGTTCGGGAGCCTGCATTTCTGCAGCTGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14788441 133 - 22200726 I e micMur3.chr1 88379319 133 + 114275543 I a score=722623.000000 s hg38.chr3_KI270934v1_alt 48153 58 + 163458 --------ACCTTGCTTCATGCTCCACATCACCTTCTTCTT-CCCCCACCC---------CAGCAC--AGGCCAAAGC s panTro5.chr3 2520376 58 - 202621043 --------ACCTTGCTTCATGCTCCACATCACCTTCTTCTT-CCCCCACCC---------CAGCAC--AGGCCAAAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108577 58 - 190779 --------ACCTTGCTTCATGCTCCACATCACCTTCTTCTT-CCCCCACCC---------CAGCAC--AGGCCAAAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61413 58 - 106623 --------ACCTTGCTTCATGCTCCACATCACCTTCTTCTT-CCCCCACCC---------CAGCAC--AGGCCAAAGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2836137 55 - 123690457 --------ACCTTGCTTCATAATCCACATCAC---CTTCTT-CCCCTACCC---------CAGTGC--AGGCCATAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2333951 58 - 204787373 --------ACCTTGCTTCAGGCTCCACATCATCTTCTTCTT-CCCCCACCC---------CAGCAC--AGGCCAAAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192399115 58 - 192460366 --------ACCTTGCTTCAGGCTCCACATCATCTTCTTCTT-CCCCCACCC---------CAGCAC--AGGCCAAAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19138564 58 - 19675229 --------ACCTTGCTTCAGGCTCCACATCATCTTCTTCTT-CCCCCACCC---------CAGCAC--AGGCCAAAGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371653 58 - 16847902 --------ACCTTGCTTCAGGCTCCACATCATCTTCTTCTT-CCCCCACCC---------CAGCAA--GGGCCAAAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91344556 55 + 91754291 --------ACCTTGCTTCAGGCTCCACATCA---TCTTCTT-CCCCCACCC---------CAGCAC--AGGCCAAAGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410728 58 + 1977891 --------ACCTTGCTTCAGGCTCCACATCATCTTCTTCTT-CCCCCACCC---------CAGCAC--AGGCCAAAGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349839 58 - 7796314 --------ACCTTGCTTCAGGCTCCACATTATCTTCTTCTT-CCCCCACCC---------CAGCAC--AGGCCAAAGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73824642 57 + 74750902 --------ACCTTGCTTCATGCTCCACATCATCTGCTTCTT-CCCCCA-CC---------CAACAC--AGGCCAAAGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17271317 57 - 17725628 --------ACCTTGCCTTATGCTCCACATTACCTGCTTCTT-CCCCCA-CC---------CAACAC--AGGCCAGAGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6360521 37 + 6778120 --------ATGTTGCTTCATGCTCCACATCACCTGCTTCTT-CCCC-------------------------------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 7565 56 + 69927 --------ACCTTGCTTCACGCTCCACATCACCTGCTCCTC-CCCC-A-CC---------CAACAC--AGGCCACAGT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88379452 58 + 114275543 --------ACCTTGCTTCACACTCCACATCACCCTCTTCAT-CCCCCACCC---------CAACAC--AGGCCAAAGC i micMur3.chr1 I 133 C 0 s proCoq1.NW_012133858v1 14788574 59 - 22200726 --------ACCTTGTTTCACACTCCAGATCACCTTCTTCATCCCCCCACCC---------CAACAC--AGGCCAAAGC i proCoq1.NW_012133858v1 I 133 I 269 s otoGar3.GL873829 201029 54 + 608964 --------ACCTTGCTTCACACTCCAGGTCA----CTTCAT-CACCTACCC---------CAACAC--CGGCTAAAGC i otoGar3.GL873829 I 7 C 0 s mm10.chr16 32782606 53 + 98207768 --------GGCTTGGTCCTTGCTTC-------CTCCTTTCT-CACCCAGCC---------CTGCACCTCAGCCAGTGC i mm10.chr16 C 0 C 0 s canFam3.chr33 2314479 64 - 31377067 --------TCCTTGCTTCCGCCTCCACGTCAC---CTTCTT-CCCCTTCCCAGGGGGAAGAAATGC--AAGCCAAAGC i canFam3.chr33 I 6 C 0 s dasNov3.JH569502 2692986 63 - 6579706 GACATGGGCCCTTGCCACAACCTCCACATCAGCTCTCTCCT-CCCC-ACCC---------CAGTAC--ACGCCAAG-- i dasNov3.JH569502 C 0 C 0 a score=31678.000000 s hg38.chr3_KI270934v1_alt 48211 3 + 163458 TTC s panTro5.chr3 2520434 3 - 202621043 TTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108635 3 - 190779 TTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61471 3 - 106623 TTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2836192 3 - 123690457 TTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2334009 3 - 204787373 TTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192399173 3 - 192460366 TTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19138622 3 - 19675229 TTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371711 3 - 16847902 TTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91344611 3 + 91754291 TTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410786 3 + 1977891 TTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349897 3 - 7796314 TTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73824699 3 + 74750902 TTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17271374 3 - 17725628 TTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6360558 1 + 6778120 --C i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 7621 3 + 69927 TTC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88379510 3 + 114275543 CTG i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 201083 3 + 608964 CTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32782659 3 + 98207768 TTC i mm10.chr16 C 0 I 927 s canFam3.chr33 2314543 3 - 31377067 CTG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14788633 269 - 22200726 I e dasNov3.JH569502 2693049 0 - 6579706 C a score=169525.000000 s hg38.chr3_KI270934v1_alt 48214 16 + 163458 GCCCGCTAAGGAGGAG s panTro5.chr3 2520437 16 - 202621043 GCCCGCTAAGGAGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108638 16 - 190779 GCCCGCTAAGGAGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61474 16 - 106623 GCCCGCTAAGGAGGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2836195 16 - 123690457 GCCCGCTAAGGACGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2334012 15 - 204787373 -CCCTCTAAGGAGGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192399176 15 - 192460366 -CCCTCTAAGGAGGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19138625 15 - 19675229 -CCCTCTAAGGAGGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371714 15 - 16847902 -CCCTCTAAGGAGGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91344614 15 + 91754291 -CCCTCTGAGGAGGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410789 15 + 1977891 -CCCTCTAAGGAGGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349900 15 - 7796314 -CCCTCTAAGGAGGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73824702 14 + 74750902 ACCCTCTAAGGAGG-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17271377 14 - 17725628 ACCCTCTAAGGAGG-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6360559 14 + 6778120 ACCCTCTAAGGAGG-- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 7624 14 + 69927 ACCCTCTAAGGAGG-- i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88379513 16 + 114275543 GCCCTCTAGGGAGGAG i micMur3.chr1 C 0 I 3613 s otoGar3.GL873829 201086 10 + 608964 GCCCTCTAAG------ i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2314546 16 - 31377067 GCCTTCTGAGGAGGAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2693049 14 - 6579706 --CCTCTGAGGGGGAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14788633 269 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I a score=730621.000000 s hg38.chr3_KI270934v1_alt 48230 67 + 163458 AGCGAAAGAGATACCCCAAGATGGAGTGCCCCAGACTCTCT--CCCAGGACCCCTCCCTGCCTGCCTGT------- s panTro5.chr3 2520453 67 - 202621043 AGCGAAAGAGTTACCCCAAGATGGAGTGCCCCAGACCCTCT--CCCAGGACCCCTCCCTGCCTGCCTGT------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108654 67 - 190779 AGCGAAAGAGTTACCCCAAGATGGAGTGCCCCAGACCCTCT--CCCAGGACCCCTCCCTGCCTGCCTGT------- i panPan2.chrUn_NW_014024201v1 C 0 I 1954 s gorGor5.CYUI01000576v1 61490 66 - 106623 AGTGAAAGAGATACCCCAAGATGGAATGCCCCAGACCCTCT---CCAGGACCCCTCCCTGCCTGCCTGT------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2836211 67 - 123690457 AGCGAAAGAGATACCCCAAGATGGAGTGCCCCAGACTCTCT--CCCAGGACCCCTCCCTGCCTGCCTGT------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2334027 67 - 204787373 GGCGAAAGAGATACCCCAAGATGGAGTGACCCAGACTCTCT--CCCAGGACCCCTCCCCACCTGCCTGT------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192399191 67 - 192460366 GGCGAAAGAGATACCCCAAGATGGAGTGACCCAGACTCTCT--CCCAGGACCCCTCCCCACCTGCCTGT------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19138640 67 - 19675229 GGCGAAAGAGATACCCCAAGATGGAGTGCCCCAGACTCTCT--CCCAGGACCCCTCCCCACCTGCCTGT------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371729 67 - 16847902 GGCAAAAGAGATACCCCAAGATGGAGTGCCCCAGACTCTCT--CCCAGGACCCCTCCCCACCTGCCTGT------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91344629 67 + 91754291 GGCGAAAGAGATACCCCAAGATGGAGTGCCCCAGACTCTCT--CCCAGGACCCCTCCCCACCTGCCTGT------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410804 67 + 1977891 GGCAAAAGAGATACCCCAAGATGGAGTGCCCCAGACTCTCT--CCCAGGACCCCTCCCTACCTGCCTGT------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349915 67 - 7796314 GGCGAAAGAGATACCCCAAGATGGAGTGCCCCAGACTCTCT--CCCAGGACCCCTCCCCACCTGCCTGT------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73824716 65 + 74750902 ----ACAGAGATACCCCAAGATGGAGTGCCCCAGACTGTCTCTCCCAGGACCCCTCCCCGCCTGCTTGT------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17271391 65 - 17725628 ----ACAGAGATACCCCAAGATGGAGTGCCCCAGACTCTCTGTCCTGGGACCCCTCCCTGCCTGCTTGT------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6360573 65 + 6778120 ----ACACAGATACCCCAAGATGGAGTGCCCCAGACTCTCTCTCCCAGGACCCCTCCCTGCCTGCTTGT------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 7638 65 + 69927 ----ACAGAGATACCCCAAGATGGAGTGCCCCAGACTCTCTCTCCCAGGACTCCTCCCTGCCTGCTTGT------- i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 201096 69 + 608964 ACTGCCAGAGATACCACTAAATGGAGTATCCCAGACTCTCTGTCCTGGGACCTCTCCCTGTTTTTCTGA------- i otoGar3.GL873829 C 0 I 7 s canFam3.chr33 2314562 49 - 31377067 ---AGTAGAGACACCCCCACATGGAGTAGCCCAGACTCA----CCCGGGCACCCTC-------------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2693063 73 - 6579706 ---GGTCCAGCTAAGCCCGCAGGGCTGATTCCATACTCTCTCTCCCAGGACCCCTCCCTGCCTTGCTGATCTCTGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14788633 269 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e micMur3.chr1 88379529 3613 + 114275543 I a score=2075121.000000 s hg38.chr3_KI270934v1_alt 48297 189 + 163458 CCATCAGTTTCACAAAAGTTGTAAAA-GGATCAATGCACAGTGTGTTTACCTG-TCTGGTGGCTGTCCCCACCGCCTGCGTTTCATGGAAGAGCGATTAAACCATTTCAGCTCCCTTTCCAGGAACCAACTCAAGAAACATGCCA-CCACCCCACCCTTAGATCTGGAGGGCCCGACCCCTCATATACCCT-C s panTro5.chr3 2520520 190 - 202621043 CCATCAATTTCACAAAAGTCGTAAAA-GGATCAATGCACAGTGTGTTTTCCTG-TCTGGTGGCTGTCCCCACCGCCTGTGTTTCATGGAAGAGGGATTAAACCATTTCAGCTCCCTTTCCAGGAACCAACTCAAGAAACATGCCA-CCACCCCACCCTTAGATCTGGAGGACCCGATCCCTCATATACCCTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110675 190 - 190779 CCATCAATTTCACAAAAGTCGTAAAA-GGATCAATGCACAGTGTGTTTTCCTG-TCTGGTGGCCTGTCCCACCGCCTGTGTTTCATGGAAGAGGGATTAAACCATTTCAGCTCCCTTTCCAGGAACCAACTCAAGAAACATGCCA-CCACCCCACCCTTAGATCTGGAGGACCCGATCCCTCATATACCCTTC i panPan2.chrUn_NW_014024201v1 I 1954 C 0 s gorGor5.CYUI01000576v1 61556 189 - 106623 CCATCAATTTCACAAAAGTCGTAAAA-GGATCAATGCACAGCGTGTTTTCCTG-TCTGGTGGCTGTCCCCACCGCCTGCGTTTCATGGAAGAGGGATTAAACCATTTCAGCTCCCTTTCCGGGAACCAACTCAAGAAACATGCCA-CCACCCCACCCTTAGATCTGGAGCACCCCATTCCTCATATACCCT-G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2836278 189 - 123690457 CCATCAATTTCACAAAAGTCGTAAAA-GGATCAATGTAGAGTGTGTTTTCCTG-TCTGGTGGCTGTCCCCACCGCCTGTGTTTCATGGAAGAGGGATTAAACCATTTCAGCTCCATTTCCAGGAACCAGCTCAAGAAACATGCCA-CCACCCCACCCTTAGATCTGGAGGACCCGAGCCCTAATATACCTT-C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2334094 186 - 204787373 CCATCAATTTCAA-AAAGTCATAAAA-GGATCAATGTACAGTGTGTTTTCCTG-TCTGGTGGCTGTCCCCACCGCCTGTGTTTCATGGAAGAGGGATTAAACCATTTCAGCTCCCTTTCCAGGAACCAACTCAAGAAACATGCCA-CCACCCCACCCTTAGATCTGGAGGACCCGATCCCTA--ATACCTT-C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192399258 186 - 192460366 CCATCAATTTCAA-AAAGTCATAAAA-GGATCAATGTACAGTGTGTTTTCCTG-TCTGGTGGCTGTCCCCACCGCCTGTGTTTCATGGAAGAGGGATTAAACCATTTCAGCTCCCTTTCCAGGAACCAACTCAAGAAACATGCCA-CCACCCCACCCTTAGATCTGGAGGACCCGATCCCTA--ATACCTT-C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19138707 186 - 19675229 CCATCAATTTCAC-AAAGTCATGAAA-GGATCAATGTACAGTGCGTTTTCCTG-TCTGGTGGCTGTCCCCACCGCCTGTGTTTCATGGAAGAGGGATTAAACCATTTCAGCTCCCTTTCCAGCAACCAACTCAAGAAACATGCCA-CCACCCCACCCTTAGATCTGGAGGACCCAATCCCTA--ATACCTT-C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371796 188 - 16847902 CCATCAATTTCAC-AAAGTCATAAAA-GGATCAATGTACAGTGTGTTTTCCTG-TCTGGTGGCTGTCCCCACCGCCTGTGTTTCATGGAAGAGGGATTAAACCATTTCAGCTCCCTTTCCAGGAGCCAACTCAAGAAACATGCCA-CCACCCCACCCTTAGATCTGGAGGACCCGATCCCTAATATACCTT-C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91344696 188 + 91754291 CCATCAATTTCAC-AAAGTCATAGAA-GGGTCAGTGTACGGTGCGTTTTCCTG-TCTGGTGGCTGTCCCCACCGCCTGTGTTTCATGGAAGAGGGATTACACCATTTCAGCTCCCTTTCCAGGAACCAACTCAAGAAACATGCCA-CCACCCCACCCTTAGATCTGGAGGACCCAATCCCTAATATACCTT-C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1410871 188 + 1977891 CCATCAATTTCAC-AAAGTCATAAAA-GGATCAATGTACAGTGCGTTTTCCTG-TCTGTTGGCTGTCCCCACTGCCTGTGTTTCATGGAAGAGGGATTAAACCATTTCAGCTCCCTTTCCAGGAGCCAACTCAAGAAACATGCCA-CCACCGCACCCTTAGATCTGGAGGACCCGATCCCTAATATACCTT-C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7349982 188 - 7796314 CCATCAATTTCAC-AAAGTCATAAAA-GGATCAATGTACAGTGTGTTTTCCTG-TCTGGTGGCTGTCCCCACCACCTGTGTTTCATGGAAGAGGGATTAAACCATGTCAGCTCCCTTTCCAGGAACCAACTCAAGAAACATGCCG-CCACCCCACCCTTAGATCTGGAGGACCCGATCCCTAATATGCCTT-C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73824781 181 + 74750902 CTATCAATTTCAC-AAAGTTGTAAAA-GGATAAATG--CAG----TTTTCCTG-TCTGGTGGCTGTCCCCAC-GCCTGTCTTTCATGGAAGAGGGATTAAACCATTTTGGCTCCCTTTCCAGGAACCAACTCAAGAAACGTGCCA-CCCACCCACCCTTAGATCTGGAGGACCTGATCCCTAATATGCCTT-C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17271456 185 - 17725628 CCATCAATCTCAC-AAAACTGTAAAAGGGATAAATG--CAGTGTCTTTTCCTG-TCTGGTGGCTGTCCCCAC-ACCCATGTGTCATGGAAGAGGGATTAGACCATTTTGGCTCCCTGTCCAGGAACCAACTCAAGAAACGTGCC--CCTACCCACCTTTAGATCTGGAGGACCTGATCCCTAATAGACCTC-C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6360638 184 + 6778120 CCGTCAATTTCAC-AAAATTGTAAAA-GGATAAATG--CAGTGTCTTTTCCTG-TCTGGTGGCTGTCCCCAT-GCCCCTGTTTCATGGAAGAGGGATTAAACCATTTTGGCCCCCTGTCCAGGAACCAACTCAAGAAACGTGCC--ACCCCCCACCCTTAGATCTGGAGGACCTGATCCCTAATATACCTT-C i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 7703 168 + 69927 CCATCAATTTCAC-AAAATTGTAAAA-GGATAAATG--CAGTGTCTTC-----------------TCCCCAC-GCCTGTGTTTCATGGAAGAGGGATTAAACCATTTTGGCTCCCTTTCCGGGAACCAACTCAAGAAAAGTGCC--GCCCACCACCCTTAGATCTGGAGGACCTGATCCCTAATATACCTT-C i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 201172 189 + 608964 CTATCATTTTTACAAAAATAGCAAAA-GAATAAACACACAGTATATTTTTCTG-TCTAATTGCTGTCCCCACTGCTTGAGTTCTCTAGAAAAGGAATTAAGTCATTTCAGCTCCCTTTCCAG-AGCAATCTCAAGAAGCATGCCCTCCACTCCATCTTTATATCTGGGGCACCTAATCCCTAATATACTTT-T i otoGar3.GL873829 I 7 C 0 s canFam3.chr33 2314611 164 - 31377067 ---------TAAC---AGTTCCGAGA-GGGTAAATACACAGTGCCTTTACCTA-TCTGCTC-TTGCTCCCAC----TGTGTTCCCTGGAGGAGGGCTTACAC--------CTCCCTTTCCAAGAACCAATTTGAGAAGCGTGCCACCCACCCCCTCCTTAGACCTGGAGCACACAAT-CCTAATATACTCT-C i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2693136 191 - 6579706 CCATCAGTTTCACAAAAATGATAAGC-TTCAGAATTCATAGTGGCTTTTCCTGTTCTGGCTCCTGTGCCCACTGCCAGTGTTCCCTGGAGAATGGATTAAGCCATTTCAGCTTCCTTTCCAGGAACCAACTCAAGGAGCATGCCACCCACCCCATCCTTAGGCCCGGGGTACCCAGTCCCTGGTTCACTTT-C i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14788633 269 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e micMur3.chr1 88379529 3613 + 114275543 I a score=4582244.000000 s hg38.chr3_KI270934v1_alt 48486 345 + 163458 TCTGTCCTTTCCCGGACCCCAGATGGAGTCTTCTGAGG--TTCTCCAT--------CCCACAGCCCTTCACCTCTACCCTGCCTCCACTTG-CCCCAGCAACCTGATCAGCTTCCACAGAATC------CTCTC----AGCAGGCGGGACTTTTAC--ACCTATCTGGTGTAATAACTCCAAC-ACAATTGGTccacaattcctgtgtctagaaaatctcaattcc----aactttatgcagaaactaggtagctgcctcttagttctaaatcccaaa---------tccctgaagagagaatctgactggtccaatttacatcagttgtttatgcctggtccaataaaatgtag-tcatggggtcagaaaggaggtcacatg s panTro5.chr3 2520710 346 - 202621043 TCTGTCCTTTCCCGGACCCCAGATGGAGTCTTCTGAGG--TTCTCCAT--------CCCACAGCCCTTCACCTCTACCCTGCCTCCACTTGTCCCCAGCAACCTGATCAGCTTCCACAGAATC------CTCTC----AGCAGGTGGGACTTTTAC--ACCTATCTGGTGTAATAACTCCAAC-ACAATTGGTccacaattcctgtgtctagaaaatctcaattcc----aactttatgcagaaactaggtagctgcctcttagttctaaatcccaaa---------tccctgaagagagaatctgactggtccaatttacatcagttgtttatgcctggtccaataaaatgcag-tcatggggtcagaaaggaggtcacatg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110865 346 - 190779 TCTGTCCTTTCCCGGACCCCAGATGGAGTCTTCTGAGG--TTCTCCAT--------CCCACAGCCCTTCACCTCTACCCTGCCTCCACTTGTCCCCAGCAACCTGATCAGCTTCCACAGAATC------CTCTC----AGCAGGTGGGACTTTTAC--ACCTATCTGGTGTAATAACTCCAAC-ACAATTGGTccacaattcctgtgtctagaaaatctcaattcc----aactttatgcagaaactaggtagctgcctcttagttctaaatcccaaa---------tccctgaagagagaatctgactggtccaatttacatcagttgtttatgcctggtccaataaaatgcag-tcatggggtcagaaaggaggtcacatg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61745 346 - 106623 TCTGTCCTTTCCCGGACCCCAGATGGAGTCTTCTGAGG--TTCTCCAT--------CCCAGAGCCCTTCACCTCTATCCTGCCTCCACTTGTCCCCAGCAACCTGATCAGCTTCCACAGAATC------CTCTC----AGCAGGCGGGACTTTTAC--ACCTATCTGGTGTAATAACTCCAAC-ACAATTGGTccacaattcctgtgtctagaaaatctcaattcc----aactttatgcagaaactaggtagctgcctcttagttctaaatcccaaa---------tccctgaagagagaatctgactggtccaatttacatcagttgtttatgcctggtccaataaaatgcag-tcatggggtcagaaaggaggtcacatg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2836467 346 - 123690457 TCTGTCCTTTCCCGGACCCCAGATGGAGTCCTCTGAGG--TTCTCCAT--------CCCACAGCCCTTCACCTCTACCCTGCCTCCACTTGTCCCCAGCAACCTGATCAGCTTCCACATAATC------CTCTC----AGGAGGCGGGACTTTTAC--ACATATCTGGTGTAATAACTCCAAC-GCAATTGGTccacaattcctgtgtctagaaaatttcagttcc----aactttatgcagaaactaggtagctgcctcttagttctaaaccccaaa---------tccctgaagagagaatctgactggtccaatttacatcagttgtttatgcctggtccaataaaatgcag-tcatggggtcagaaaggaggtcacatg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2334280 346 - 204787373 TCTGTCCTTTCCTGGACCCCAGATGGAGTCTTCTGAGG--TTCTCCAT--------CCCACAGCCCTTCAGCCCTACCCTGCCTCCACTTGTCCCCGGCAACCTGATCAGCTTCCACATAATC------CTCTC----AGCAGGCAGGACTTTTAC--ACCTATCTGGTGTAACAACTCCAAC-ACCATTGGTccccaattcctgtgtctagaaaatctcaattcc----aactttatgcagaaactaggtagctgcctcttagttctaaatcccaaa---------tccctgaagagagaatctgactggtccaatttacatcagttgtttatgcctggtccaataaaatgcag-tcatggggtcagaaaggaagtcacatg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192399444 346 - 192460366 TCTGTCCTTTCCTGGACCCCAGATGGAGTCTTCTGAGG--TTCTCCAT--------CCCACAGCCCTTCAGCCCTACCCTGCCTCCACTTGTCCCCGGCAACCTGATCAGCTTCCACATAATC------CTCTC----AGCAGGCAGGACTTTTAC--ACCTATCTGGTGTAACAACTCCAAC-ACCATTGGTccccaattcctgtgtctagaaaatctcaattcc----aactttatgcagaaactaggtagctgcctcttagttctaaatcccaaa---------tccctgaagagagaatctgactggtccaatttacatcagttgtttatgcctggtccaataaaatgcag-tcatggggtcagaaaggaagtcacatg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19138893 346 - 19675229 TCTGTCCTTTCCTGGACCCCAGATGGAGTCTTCTGAGG--TTCTCCAT--------CCCACAGCCCTTCAGCCCTACCCTGCCTCCACTTGTCCCCGGCAACCTGATCAGCTTCCACATAATC------CTCTC----AGCAGGCAGGACTTTTAC--ACCTATCTGGTGTAACAACTCCAAC-ACCATTGGTccccaattcctgtgtctagaaaatctcaattcc----aactttatgcagaaactaggtagctccctcttagttctaaatcccaaa---------tccctgaagagagaatctgactggtccaatttacatcagttgtttatgcctggtccaataaaatgcag-tcatggggtcagaaaggaagtcacatg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16371984 349 - 16847902 TCTGTCCTTTCCCGGACCCCAGATGGAGTCTTCTGAGG--TTCTCCAT--------CCCACAGCCCTTCAGCCCTACCCTGCCTCCACTTGTCCCCAGCAACCTGATCAGCTTCCACATAATC------CTCTC----AGCAGGCAGGACTTTTAC--ACCTATCTGGTGTAACAACTCCAAC-ACCATTGGTCCCCAATTCCTGTGTCTAGAAAATCTCAATTCTGCAAAACTTTACGC-GAAACTAGGTGGCTGCctcttagttctaaatcccaaa---------tccctgaagagagaatctgactggtccaatttacatcagttgtttatgcctggtccaataaaatgcag-tcatggggtcagaaaggaagtcacatg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91344884 358 + 91754291 TCTGTCCTTTCCCGGACCCCAGATGGAGTCTTCTGAGG--TTCTCCATCCCACAGCCCCACAGCCCTTCAGCCCTACCCTGCCTCCACTTGTCCCCAGCAACCTGATCAGCTTCCACATAATC------CTCTC----AGCAGGCAGGACTTTTAC--ACCTATCTGCTGTAACAACTCCAAC-ACCATTGGTCCCCAATTCCTGTGTCTAGAAAATCTCAATTCTGCAAAACTTTATgcagaaactaggtggctgcctcttagttctaaatcccaaa---------tccctgaagagagaaactgactggtccaatttacatcagttgtttatgcctggtccaataaaatgcag-tcatggggtcagaaaggaagtcacatg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1411059 350 + 1977891 TCTGTCCTTTCCCGGACCCCAGATGGAGTCTTCTGAGG--TTCTCCAT--------CCCACAGCCCTTCAGCCCTACCCTGCCTCCACTTGTCCCCGGCAACCTGATCAGCTTCCACATAATC------CTCTC----AGCAGGCAGGACTTTTAC--ACCTATCTGGTGTAACAACTCCAAC-ACCATTGGTCCCCGATCCCTATGTCTAGAAAATCTCAATTCTGCAAAACTTTATgcagaaactaggtggctgcctcttagttctaaatcccaaa---------tccctgaagagagaatctgactggtccaatttacatcagttgtttatgcctggtccaataaaatgcag-tcatggggtcagaaaggaagtcacatg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7350170 346 - 7796314 TCTGTCCTTTCCCGGACCCCAGATGGAGTCTTCTGAGG--TTCTCCAT--------CCCACAGCCCTTCAGCCCTACCCTGCCTCCACTTGTCCCCAGCAACCTGATCAGCTTCCACATAATC------CTCTC----AGCAGGCAGGACTTGTAC--ACCTATTTGGTGTAACAACTCCAGC-ACCATTGGTccccaattcctgtgtctagaaaatctcagttcc----aactttatgcagaaactaggtagctgcctcttagttctaaatcccaga---------tccctgaagagagaatctgactggtccaatttacatcagttgttaatgcctggtccaataaaatgcag-tcatggggtcagaaaggaagtcacatg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73824962 339 + 74750902 TCCGTCCTTTCCGGGACCCCAGATGGAGTGTTCTGAGG--TTCTCCAT--------TCCACAGCCCCTCAGCCCTACCCTGCCTCTACTAGTCCCCAGCAACCTGATCAGCTCCCGCATGATC------CTCTC----AGCAGGCAGGACTTCTAC--ACCTATCTGGTGTAACAACTCCAAC-ACAATTGGTCCACACTTCCTGC------AAAACCTC-ATTCC----AACTTCATGCAGAAACTAGGTAGCTGCCTCTTAGTTCTAAATCCCAAA---------TCCCTGAAGACAGAATCTGATTGGTCCCATTTACATCAGTTGTTTATGCCTGGTCCAATAAAATGCAA-TCATGGGGTGAGAAAGGAGGTCACGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17271641 337 - 17725628 TCCGTCCTTTCCGGGACCCCAGATGGAGTGCTCTGAGG--TTCTGCAT--------CCCACAGCCCCTCAGCCCTACCCTGCCT---CTAGTCCCCAGCAACCTGATCAGCTCCCACATAATA------CTCTC----AGCAGGCAGGACTCTTAA--ACCTATCTGGTGTAGCAACTCCAAC-ACAGTTGGTCCGCAATTCCTGC------AAAACCTCAATTCC----AACTTTATgcagaaactaggtagctacctcttagttctaaattccaaa---------tccctgaagagagaatctggttggtccaatttacatcaattgtttatgcctggtccaataaaatgcaa-ccatggggtgagaaagggggtcacgtg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6360822 340 + 6778120 TCCGTCCTTTCCGGGACCCCAGACGGAGTGTTCTGAGG--TTCTCCAT--------CCCACAGCCCCTCAGCCCTACCCTGCCTCTACTAGTCCCCAGCAACCTGATCAGCTCCCACATCATC------CTCTC----AGCAGGCAGGACTCTTAC--ACCTATCTGGTGTAACAACTCCaac-acaactggtccacaattcctgc------aaaacctcaattcc----aactttatgcagaaactaggtagctgcctcttagttctaaatcccaaa---------tccctgaagagagaatctgattggtccagtttacgtccgttgtttatgcctggtccaataaaatgcaa-tcatggcgtgagaaaggaggtcacgtg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 7871 332 + 69927 TCCGTCCTTTCCGGGACCCCA----GAGTGTTCTGAGG--TTCTCCAT--------CCCACAGCCCCTCAGCCCTACCCTGCCTCTACTA-TCCCCAGCAACCTGATCAGCTCCCACATAATC------CTCTC----AGCAGGTGGGACTTTTAC--ACCTATCTGGTGTCACAACTCCAAC-ACAATTGGTccacaattcctgc------aaaacctcaattcc----aactttatgcagaaactaggtagctgcctcttagttctaaatcccaaa---------tccctgaagggagaatctgattggtccaatttacgtcagttgtttatgcctggtccagtaaaaggcga-tcatggggtgagaaa---ggtcacatg i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14788902 353 - 22200726 TCTGTCCTTTCCTAGACCCCAGGTAGAGTCTTCTGAGG--TTCTCCAT--------CCCACAGTCCTTCAGCCCTATTCTATCTCCACTTGTTCCCAGCAACCTGATCAGCTTTCACATCATCA--TCTCTCTC----AGCAGGCGGAACTTTTATACAGCCATCTGGTGTAACAATTCCAACAACAGTTGGTccacaacttttgtgtctaaaacacctcaattcc----aattctatgcagaaactaggtagctgcctgttggtcctaaatcccaaa---------tccctgaaaaatgaatctgattggcccaatttatgtcagttgtccatccctggtccaatcaagtgtgg-ccatggttacagaaaggaagtcacatg i proCoq1.NW_012133858v1 I 269 I 114 s otoGar3.GL873829 201361 334 + 608964 TCTGTCCTTTCCTAGACTCCAAGTGGAGTTTTCTGAGT--TTCTCCAC--------CCTACAATCCCTCAGCCCCACTCTATCTCC--------------ACATGATCAGCCTCCACGTCATCAT-TCTCTCTT----AGGAGGCAGAACTTTTAT--AATTAACTGGTGTAACAATTCCAACAACAATTGATccataacttctgtgtcttgagttcctcaattcc----aattccatgcagaaactaggtacctgcctagatctcttaa---ccaaa---------tccctgaaaaggaaatcttgttggctcaatttatgtcaattgtccat-cctgatcaaatcaaatctgg-ccatagtgcccgaaaggaagccacatg i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2314775 344 - 31377067 TCTGTCCTTTCCTGAGCCCCA-CTGGAGCCTTCTGAGT--CTCTTCAC--------CCCATGATCCCTTGGTCCCTCTCTGCCC------ATTCCCAGCCACATGATCGGTTTCCACCTCATC------TTCTCTCCTAGCAGAAAGAACGTC-AC--ACCTATCTGGTGTAACTAGTCCAACAAAAACTGGTccacagctcctaggtctagaatacctcaattcc----acctctatggagaaactagagagctgcctcttgctcctaaatcccaac---------tccctgaggggagaatatgattagtccagcttatgtcaattgtctatcactggtccaaataagtgtggaccatagggtaggaaaggaggtcacatg i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2693327 320 - 6579706 TCTGTCTCTTCCTGGGCCCC---CTGACCCTTCTGGGTTCTCCTCCAC--------TCCACAGTCCCACAGCCACATC--------ATCTGTCCCCAGCAGCCTGATTAGTTTCCACGTCGTCCTGTTCCTCTT----GGCAGGCAGGACATCAAC--ACCTATCTGTT-------------C-ATTACTGGTCCACAACTCCTGCATCTAGAGCATCTCAGTTCC----AGCTCCGTGCTGACACTACGTAGCTGCCACTTGGTCCTAAATTCGAGAGACGGATTTGTCCTGAGGAGAGGACCTGAGTGGCTCAGTTTAT-------------------TCCAGGCAAGTGTAG-CCATAGGGAGAGAAGGGAGGTCGCAGG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32782662 927 + 98207768 I e micMur3.chr1 88379529 3613 + 114275543 I a score=269632.000000 s hg38.chr3_KI270934v1_alt 48831 24 + 163458 gtgcaaagcaggtgttcaagctca s panTro5.chr3 2521056 24 - 202621043 gtgcaaagcaggtgttcaagctca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 111211 24 - 190779 gtacaaagcaggtgttcaagctca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62091 24 - 106623 gtgcaaagcaggtgttcaagctca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2836813 24 - 123690457 gtgcaaagcaggtgttcaagctca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2334626 24 - 204787373 gtgcaaagcaggtgttcaagctca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192399790 24 - 192460366 gtgcaaagcaggtgttcaagctca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19139239 24 - 19675229 gtgcaaagcaggtgttcaagctca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16372333 24 - 16847902 gtacaaaGCAGGTGTTCAAGCTCA i cerAty1.NW_012004056v1 C 0 I 3072 s chlSab2.chr15 91345242 24 + 91754291 gtgcaaagcaggtgttcaagctca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1411409 24 + 1977891 gtgcaaagcaggtgttcaagctca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7350516 24 - 7796314 gtgcaaagcgggtgttcaagctca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73825301 24 + 74750902 GTGCAAAGTCAGTGTTCAAGCTTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17271978 24 - 17725628 gtgcaaagtcgatgttcaagctca i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6361162 24 + 6778120 gcacaaagtctgtgttcaagctca i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 8203 24 + 69927 gtgcaaagccggtgttcaagctca i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 201695 24 + 608964 aaacaaactctgtgcttgggctca i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2315119 24 - 31377067 acatgatcctggtgctcaggctca i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2693647 24 - 6579706 AACCATTCCTGGAGGCCAGGCTCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14789255 114 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e micMur3.chr1 88379529 3613 + 114275543 I a score=136039.000000 s hg38.chr3_KI270934v1_alt 48855 11 + 163458 ttcttgcgggt s panTro5.chr3 2521080 11 - 202621043 ttcttgcgggt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 111235 11 - 190779 ttcttgcgggt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62115 11 - 106623 ttcttgcgggt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2836837 11 - 123690457 ttcttgtgggt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2334650 11 - 204787373 ctcttgcgggt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192399814 11 - 192460366 ctcttgcgggt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19139263 11 - 19675229 ctcttgcgggt i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91345266 11 + 91754291 ctcttgcgggt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1411433 11 + 1977891 ctcttgcgggt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7350540 11 - 7796314 ctcttgcgggt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73825325 11 + 74750902 CTCTTGTGGGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17272002 11 - 17725628 ctcttgtaggt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6361186 11 + 6778120 gtcttgtgggt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 8227 11 + 69927 ctcttgtgggt i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 201719 11 + 608964 ctcctgtgggt i otoGar3.GL873829 C 0 I 12 s canFam3.chr33 2315143 11 - 31377067 ctcttgtgggt i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2693671 11 - 6579706 CTCTTGTGGGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14789255 114 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e micMur3.chr1 88379529 3613 + 114275543 I e cerAty1.NW_012004056v1 16372357 3072 - 16847902 I a score=228195.000000 s hg38.chr3_KI270934v1_alt 48866 25 + 163458 gggTAAGTGCTGTTGAAGGAAGCTC s panTro5.chr3 2521091 25 - 202621043 gggTAAGTGCTGTTGAAGGAAGCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 111246 25 - 190779 gggTAAGTGCTGTTGAAGGAAGCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62126 25 - 106623 gggTAAGTGCTGTTGAAGGAAGCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2836848 25 - 123690457 gggTAAGTGCTGTTGAAGGAAGCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2334661 25 - 204787373 gggTAAGTGCTGTTGAAGGAAGCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192399825 25 - 192460366 gggTAAGTGCTGTTGAAGGAAGCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19139274 25 - 19675229 gggTAAGTGCTGTTGAAGGAAGCTC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91345277 25 + 91754291 gggTAAACGCTGTTGAAGGAAGCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1411444 25 + 1977891 gggTAAATGCTGTTGAAGGAAGCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7350551 25 - 7796314 ggggaagtgctgctgaaggaagCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73825336 24 + 74750902 GGGTAAGTGGTG-TGAAGGAAGCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17272013 24 - 17725628 gcgtaagtggtG-TGAAGGAAGCAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6361197 24 + 6778120 gggTAAATGGTG-TGAAGGAAGCAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 8238 24 + 69927 gggtaagtggtG-TGAAGGAAGCAC i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 2315154 25 - 31377067 gagcaagtggtGCTGGAGGAAGTTC i canFam3.chr33 C 0 I 13 s dasNov3.JH569502 2693682 25 - 6579706 GGCTAAGTGGTGGTGTGGGAAATTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14789255 114 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e micMur3.chr1 88379529 3613 + 114275543 I e otoGar3.GL873829 201730 12 + 608964 I e cerAty1.NW_012004056v1 16372357 3072 - 16847902 I a score=185655.000000 s hg38.chr3_KI270934v1_alt 48891 22 + 163458 CCAAAGGAAT---ATCTTTggttgg s panTro5.chr3 2521116 22 - 202621043 CCAAAGGAAT---ATCTTTggttgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 111271 22 - 190779 CCAAAGGAAT---ATCTTTggttgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62151 22 - 106623 CCAAAGGAAT---ATCTTTggttgg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2836873 22 - 123690457 CCAAAGGAAT---ATCTTTggctgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2334686 22 - 204787373 CCAAAGGAAT---ATCTTTggttgg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192399850 22 - 192460366 CCAAAGGAAT---ATCTTTggttgg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19139299 22 - 19675229 CCAAAGGAAT---ATCTTTggttgg i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91345302 22 + 91754291 CCAAAGGAAT---ATCTTTggttgg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1411469 22 + 1977891 CCAAAGGAAT---ATCTTTggttgg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7350576 22 - 7796314 CCAAAGGAAT---ATCTTTggttgg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73825360 25 + 74750902 CCAAAGAAATATGATCTTTGATTgg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17272037 24 - 17725628 CCAGAGATATATGATC-TTGATTgg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6361221 25 + 6778120 CCAAAGAAATATGATCTTTGATTgg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 8262 25 + 69927 CCAAAGAAATGTGATCTTTGATTgg i aotNan1.NW_018503669v1 C 0 C 0 s dasNov3.JH569502 2693707 25 - 6579706 TCAGAGAAAGATGATCTTTGATCAG i dasNov3.JH569502 C 0 I 24 e proCoq1.NW_012133858v1 14789255 114 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e micMur3.chr1 88379529 3613 + 114275543 I e canFam3.chr33 2315179 13 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I e cerAty1.NW_012004056v1 16372357 3072 - 16847902 I a score=2360396.000000 s hg38.chr3_KI270934v1_alt 48913 275 + 163458 gcacggtggctcacgcctgtaatcccaacattttgggaggccaaggcgggcagatcacttgaggccaggagtttgagaccagcctggccaacatagtgaaaccctgtctctact-aaaatacaaaaattcgctgggcgtggtggcacacgcctataatcccagctactcaggaggctgaggcaggagaatctcttgaacccaggaggcggaggttgcagtgagctgagattgtgccactgcactccagcctgggcaacagagcaagactctgtctc s panTro5.chr3 2521138 275 - 202621043 gcacagtggctcacgcctgtaatcccaacactttgggaggccaaggcgggcagatcacttgaggccaggagtttgagaccagcctggccaacatagtgaaaccctgtctctact-aaaatacaaaaattcgctgggcatggtggcagacgcctataatcccagctactcaggaggctgaggcaggagaatctcttgaacccaggaggtggaggttgcagtgagctgagattgtgccactgcactccagcctgggcaacagagcaagactctgtctc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 111293 275 - 190779 gcacagtggctcacgcctgtaatcccaacactttgggaggccaaggcgggcagatcacttgaggccaggagtttgagaccagcctggccaacatagtgaaaccctgtctctact-aaaatacaaaaattcgctgggcatggtggcagacgcctataatcccagctactcaggaggctgaggcaggagaatctcttgaacccaggaggtggaggttgcagtgagctgagattgtgccactgcactccagcctgggcaacagagcaagactctgtctc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62173 275 - 106623 gcacggtggctcacgcctgtaatcccaacactttgggaggccaaggtcggcagatcacttgaggccaggagtttgagaccagcctggccaacatagtgaaaccctgtctctact-aaaatacaaaaattcgctgggcatggtggcacatgcctataatcccagctactcaggaggctggggcaggagaatctcttgaacccaggaggtggaggttgcagtgagctgagattgtgccactgcactccagcctgggcaacagagcaagactctgtctc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2836895 275 - 123690457 gcaccgcggctcatgcctgtaatcccaacactttgggaggtcgaggcgggtggatcacttgaggccaggagtttgaaaccagcctggccaacatagtgaaaccctgtctctact-aaaatacaaaaattcactgggcatggtggcacacgcctgtaatcccagctactcaggaggctgaggcaggagaatctgttgaacccaggaggcggaggttgcagtgagctgagattgtgccactgcactccagcctgggtgacagagcaagactctgtctc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2334708 276 - 204787373 gcacagtggctcacgcctgtaatcccaacactttgggaggctgaggcgggcggatcacttgaggccaagagtttgagaccagcttggccgacatggtgaaatgctgtctctactaaaaatacaaaaattagctgggcatggtggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaacccaggaggcagaggttgcagtgagctgagatcatgccactgcactccagcctgggtgacagagcaagactctgtctc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192399872 276 - 192460366 gcacagtggcttacgcctgtaatcccaacactttgggaggctgaggcgggcggatcacttgaggccaagagtttgagaccagcttggccgacatggtgaaatgctgtctctactaaaaatacaaaaattagctgggcatggtggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaacccaggaggcagaggttgcagtgagctgagatcatgccactgcactccagcctgggtgacagagcaagactctgtctc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19139321 276 - 19675229 gcacagtggcttacgcctgtaatcccaacactttgggaggctgaggcgggcggatcacttgaggccaagagtttgagaccagcttggccgacatggtgaaatgctgtctctactaaaaatacaaaaattagctgggcatggtggcacgtgcctgtaatcccagctactcaagaggctgaggcaggagaatctcttgaacccaggaggcagaggttgcagtgagctgagatcatgccactgcactccagcctgggtgacagagcaagactctgtctc i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91345324 274 + 91754291 gcacagtggctcacgcctgtagtcccaacactttgggaggctgaggcgggcggatcacttgaggccaagagtttgagaccagcttggctgacatggtgaaacgctgtctctactaaaaatacaaaaattagctgggcgtgggggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaacccaggaggtggaggttgcagtgagctgagatcatgccactgcactccagcctgggtgacagagcaaga--ctgtctc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1411491 273 + 1977891 gcgcagtggctcacacctgtaatcccaacactttgagaggccgaggcgggcggatcacttgaggccaagagtttgagaccagcttggccgacatggtgaaacgcggtctctactaaaaatacaaaaattagctgggcgt---ggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaacccaggaggtggaggttgcagtgagctgagatcatgtcactgcactccagcctgggtgacagagcaagactctgtctc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7350598 276 - 7796314 gcacagtggctcacgcctgtaatcccaacactttgggaggctgaggcgggcagatcacttgaggccaagagtttgagaccagcttggccgacgtggtgaaacgctgtctctactaaaaatacaaaaattagctgggcatggtggcatgtgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaacccaggaggcggaggttgcagcgagctgagatcatgccactgcactccagcctgggtgacagagaaagactctgtctc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73825385 275 + 74750902 gtgcggtggctcacgcctgtaattccaacactttggaaggccaaggcaggcggaccacttgaggccaggagtttgagaccagcctggccaacatggtgaaaccctgtctctact-aaaatacaaaaattagccaggcatggtggtgcacacctgtaatcccagctactcaggaggcagaggcaggaggatctcttgaatctgggaggtagaggttgcagtgagctaagatcacgccactgcactccagcctgggcggcagagcaagcctctctctc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17272061 275 - 17725628 gtgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcaggcggatcacttgaggccaagagtttgagaccagcctggccaacatggtgaaaccctgtctctact-aaaatacaaaaattagccaggcatggtggtgcatgcctataatcccagctactgaggaggctgaggcaggagaatctcttgaatctgggaggtagagtttgcagtgagctaagatcatgccactgcactccagcctgggtgacagagctcgcctctctctc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6361246 275 + 6778120 gtgcagtggctcatgcctgtaatcccagcactttgggaggccaaggcaggcggatcacttgaggccaggagtttgagaccagcctggccaacatggtgaaaccccgtctctact-aaaacacaaaaattagccagggatggtggtgcacgcctgtaatcccagctactcaggaggttgaggcaggagaatcttttgaatctgggaggtagaggttgcagtgagctgagatcgtgccactgcactccagcctgggcgacagagctcgcctctctctc i cebCap1.NW_016107444v1 C 0 I 17 s aotNan1.NW_018503669v1 8287 267 + 69927 gtgcagtggctcatgcctgtgatcccaacactttggaaggccaa--------gatcacttgaggccaggagtttgagaccagcctggccaacatggtgaaaccctatctctact-aatatacaaaaattagccaggcgtggtggtacacacctgtaatcccagctactcaggaggttgaggcaggagaatctcttgaatctgggaggtagaggttgcagtgagctaagatcgcgcccctgcgctccagcctgggcgacagagctagcctctctctc i aotNan1.NW_018503669v1 C 0 I 25 e proCoq1.NW_012133858v1 14789255 114 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693732 24 - 6579706 I e canFam3.chr33 2315179 13 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I e cerAty1.NW_012004056v1 16372357 3072 - 16847902 I a score=-9390.000000 s hg38.chr3_KI270934v1_alt 49188 3 + 163458 aa--a s panTro5.chr3 2521413 3 - 202621043 aa--a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 111568 3 - 190779 aa--a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62448 3 - 106623 aa--a i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2837170 3 - 123690457 aa--a i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2334984 2 - 204787373 aa--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192400148 2 - 192460366 aa--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19139597 2 - 19675229 aa--- i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91345598 3 + 91754291 aaa-- i chlSab2.chr15 C 0 I 55 s colAng1.NW_012118932v1 7350874 3 - 7796314 aa-a- i colAng1.NW_012118932v1 C 0 I 3 e proCoq1.NW_012133858v1 14789255 114 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 8554 25 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693732 24 - 6579706 I e saiBol1.JH378146 17272336 0 - 17725628 C e calJac3.chr17 73825660 0 + 74750902 C e cebCap1.NW_016107444v1 6361521 17 + 6778120 I e canFam3.chr33 2315179 13 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I e manLeu1.NW_012102020v1 1411764 0 + 1977891 C e cerAty1.NW_012004056v1 16372357 3072 - 16847902 I a score=5577.000000 s hg38.chr3_KI270934v1_alt 49191 43 + 163458 aaaaaaaaaaaaatatatatatatata------tatatatatataa--------aga s panTro5.chr3 2521416 40 - 202621043 aaaaaaaaaaaaa---atatatatata------tatatatatataa--------aga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 111571 36 - 190779 aaaaaaaaaaa-------atatatata------tatatatatataa--------aga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62451 25 - 106623 aaaaa-------------atatatata------tatatat-----a--------aga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2837173 29 - 123690457 aaaaaaa---------Ttatatatata------tatatatatat------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2334986 24 - 204787373 ----------------atatgtatgtg------tatatatatataa----------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192400150 24 - 192460366 ----------------atatgtatgtg------tatatatatataa----------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19139599 24 - 19675229 ----------------atatgtatgtg------tatatatatataa----------- i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 1411764 36 + 1977891 ------------aaatatatatataca------cacatatatatagatatataa--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7350880 39 - 7796314 atatatacatacatacatatatatata------tatatatatata------------ i colAng1.NW_012118932v1 I 3 C 0 s calJac3.chr17 73825660 15 + 74750902 -------------TCTCTCTTTATATG----------------T------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17272336 31 - 17725628 -------------TCCATAtgtgtgtgtgtgtgtgtgtgtgtAT------------- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14789255 114 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 8554 25 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693732 24 - 6579706 I e cebCap1.NW_016107444v1 6361521 17 + 6778120 I e canFam3.chr33 2315179 13 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I e chlSab2.chr15 91345601 55 + 91754291 I e cerAty1.NW_012004056v1 16372357 3072 - 16847902 I a score=4242.000000 s hg38.chr3_KI270934v1_alt 49234 2 + 163458 at s panTro5.chr3 2521456 2 - 202621043 at i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 111607 2 - 190779 at i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62476 2 - 106623 at i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2837202 2 - 123690457 at i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73825675 2 + 74750902 AT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17272367 2 - 17725628 AT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6361538 2 + 6778120 GT i cebCap1.NW_016107444v1 I 17 C 0 e proCoq1.NW_012133858v1 14789255 114 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 8554 25 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693732 24 - 6579706 I e macNem1.NW_012014355v1 19139623 0 - 19675229 C e canFam3.chr33 2315179 13 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I e colAng1.NW_012118932v1 7350919 0 - 7796314 C e manLeu1.NW_012102020v1 1411800 0 + 1977891 C e chlSab2.chr15 91345601 55 + 91754291 I e cerAty1.NW_012004056v1 16372357 3072 - 16847902 I e macFas5.chr2 192400174 0 - 192460366 C e rheMac8.chr2 2335010 0 - 204787373 C a score=43965.000000 s hg38.chr3_KI270934v1_alt 49236 6 + 163458 atatat s panTro5.chr3 2521458 6 - 202621043 atatat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 111609 6 - 190779 atatat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62478 6 - 106623 atatat i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2837204 6 - 123690457 atatat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2335010 6 - 204787373 atacat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192400174 6 - 192460366 atacat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19139623 6 - 19675229 atacat i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91345656 6 + 91754291 atacat i chlSab2.chr15 I 55 C 0 s manLeu1.NW_012102020v1 1411800 6 + 1977891 atacat i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7350919 6 - 7796314 ATACAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73825677 6 + 74750902 ATATAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17272369 6 - 17725628 ATATAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6361540 6 + 6778120 ATATAT i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 14789255 114 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 8554 25 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693732 24 - 6579706 I e canFam3.chr33 2315179 13 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I e cerAty1.NW_012004056v1 16372357 3072 - 16847902 I a score=652027.000000 s hg38.chr3_KI270934v1_alt 49242 83 + 163458 ataATCTTtgtatt----agggttccctagagggtcaggactaataggatagatgtatatataaaggggagtttatgaaggagtatc s panTro5.chr3 2521464 83 - 202621043 ataATCTTtgtatt----agggttccctagagggtcaggactaataggatagaggtatatataaaggggagtttatgaaggagtatc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 111615 83 - 190779 ataATCTTtgtatt----agggttccctagagggtcaggactaataggatagatgtatatataaaggggagtttatgaaggagtatc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62484 83 - 106623 ataATCTTtgtatt----agggctccctagagggtcaggactaataggatagatgtatatataaaggggagtttatgaaggagtatc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2837210 83 - 123690457 aAAATCTTtgtatt----agggttccctagatggtcaggactaataggatagatgtatatataaaggggagtttatgaaggagtatc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2335016 87 - 204787373 atGATCTTtgtgttagtcagggttccctagagggacaggactaataggatagatgtatatataaaggggagtttatgaaggagtatc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192400180 87 - 192460366 atGATCTTtgtgttagtcagggttccctagagggacaggactaataggatagatgtatatataaaggggagtttatgaaggagtatc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19139629 87 - 19675229 atGATCTTtgtattagtcagggttccctagagggacaggactaataggatagatgtatatataaaggggagtttatgaaggagtatc i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91345662 87 + 91754291 atGATCTTtgtattagtcagggttccctagagggacagggctaataggatagatgtatatataaaggggagtttatgaaggagtatc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1411806 87 + 1977891 atGATCTTtgtattagtcagggttccctagagggacaggactaataggatagatgtatatataaaggggagtttatgaaggagtatc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7350925 83 - 7796314 ATGATCTTtgtatt----agggttccctagagggacaggactaataggatagatgtatacataaaggggagtttatgaaggagtatc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73825683 78 + 74750902 ACGGCCTTtgtatt----agggttctccagagggacaggacta-----atagatgtgtatacgaaggggagtttattaaggagtatt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17272375 78 - 17725628 AAAACCTCTGTACT----agggttctctagagggacagaacta-----atagatgtgtatacgaaggagagtttatgaaggagtgtt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6361546 78 + 6778120 ATGACCTTTGTACT----agggctctctagagggacaggacta-----atagatgtgtatacgaagcagagtttactaaggagtatt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 8579 78 + 69927 ATGACCTTtgtatt----agggttctctagagggacaggacta-----atagatgtgtatatgaaggggagtttattaaggagtatt i aotNan1.NW_018503669v1 I 25 C 0 e proCoq1.NW_012133858v1 14789255 114 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693732 24 - 6579706 I e canFam3.chr33 2315179 13 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I e cerAty1.NW_012004056v1 16372357 3072 - 16847902 I a score=4365007.000000 s hg38.chr3_KI270934v1_alt 49325 472 + 163458 gactcacacgatcacaaagtgagg-tccacaataggctgtctgcaagctgagaagcagggaagctagtctgaatcccaagatctcaaaagtagggaagccgacagtgtaaccttaagtctgtggcagaaggcccaagagcccctgacaaaccaccagtgtaagtccaagagtccaaaagctgaagaactggaagtccgatgtttgagggcaggaagcatccagcacgggagaaagatgaaggctggaagacttagccagtgtaa-tccttccacattcctctgcctgcttta-ttc----tggctatgctggcagctgattagattgtgtccacccagactgagagtgagcctgcctctcccagtccactgattcaaatattagtctccattgccaacaccctcacagagagacacccaggaacaatacgttgcatccttcagtccaatcaagttgacactcaatattaaccttcacaG s panTro5.chr3 2521547 472 - 202621043 gactcacacaatcacaaggtgagg-tccacaataggctgtctgcaagctgagaagcagggaagctagtctgaatcccaagatctcaaaagtagggaaactgacagtgcagccttaagtctgtggcagaaggcccaagagcccctgacaaaccaccagtgtaagtccaagagtccaaaagctgaagaactggaagtccgatgtttgagggcaggaagcatccagcacgggagaaagatgaaggctggaagacttagccagtgtaa-tccttccacattcctctgcctgcttta-ttc----tggctacgctggcagctgattagattgtgtccacccagactgagagtgagcctgcctctcccagtccactgattcaaatattagtctccgttgccaataccctcacagagagacacccaggaacaatacgttgcatccttcagtccaatcaagttgacgctcaatattaaccttcacaG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 111698 472 - 190779 gactcacacaatcacaaggtgagg-tccacaataggctgtctgcaagctgagaagcagggaagctagtctgaatcccaagatctcaaaagtagggaaactgacagtgcagccttaagtctgtggcagaaggcccaagagcccctgacaaaccaccagtgtaagtccaagagtccaaaagctgaagaactggaagtccgatgtttgagggcaggaagcatccagcacgggagaaagatgaaggctggaagacttagccagtgtaa-tccttccacattcctctgcctgcttta-ttc----tggctacgctggcagctgattagattgtgtccacccagactgagagtgagcctgcctctcccagtccactgattcaaatattagtctccgttgccaataccctcacagagagacacccaggaacaatacgttgcatccttcagtccaatcaagttgacgctcaatattaaccttcacaG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62567 472 - 106623 gactcacacgatcacaaggtgcgg-tccacaatagggtgtctgcaagctgagaagcagggaagctagtctgaatcccaagatctcaaaagcagggaagccgacagtgcagccttaagtctgtggcagaaggcccaagagcccctgacaaaccaccagtgtaagtccaagagtccaaaagctgaagaactggaagtctgatgtttgagggcaggaagcatccagcacgggagaaagatgaaggctggaagacttagccagtgtaa-tccttccacgttcctctgcctgcttta-ttc----tggctacgctggcagctgattagattgtgtccacccagactgagagtgagcctgcctctcccagtccactgattcaaatattagtctccgttgccaacaccctcacagagagacacccaggaacaatacgttgcatccttcaatccaatcaagttgacactcaatattaaccttcacaG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2837293 472 - 123690457 gactcacaggatcacaaggtgagg-tccacaataggccgtctgcaagctgacaagcagggaagccagtctgaatcccaagatctcaaaagtagggaagccgacagtgcagccttaagtctgtggtcaaaggcccgagagcccctgacaaaccaccagtgtaagtccaagagtccaaaagctgaagaactggaaatccaatgttcgagggcaggaagcatccagcatgggagaaagatgaaggctggaagtcttagccagtataa-tccttccacgttcctctgcctgcttta-ttc----tggctatactggcagctgattagattgtgtccacccagactgagagtgagtctgcctctcccagtccactgattcaaatattagtctccgttgccaacaccctcacagagagacacccaggaacaatactttgcatccttcagtccaatcaagttgacgctcaatattaaccttcacaG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2335103 473 - 204787373 gactcacacaatcacaaggtgagg-tccacaataggccgtctgcaagctgagaagcagggaagctagtctgaatcccaagatctcaaaagtacggaagccgacagtgcagcctcaagtctgtggccgaaggcccgagagcccctggcaaaccaccagtgtaagtccaagagtccaaaagctgaagaacttgaagtccgatgttcgagggcaggaagcatctaccacgggggaaagatgaaggctggaagactcagccagtgtaa-tccctccatgttcctctgcctgctttatttc----tagctacactggcagctgattagattgtgcctacccagattgagagtgggtctgcctctcccagtccactgattcaaatattagtctccgttgccaagaccctcacagagatacacccaggaacaatactttgtgtccttcagtccaatcaggttgacactcaatattaaccatcacaG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192400267 473 - 192460366 gactcacacaatcacaaggtgagg-tccacaataggccgtctgcaagctgagaagcagggaagctagtctgaatcccaagatctcaaaagtacggaagccgacagtgcagcctcaagtctgtggccgaaggcccgagagcccctggcaaaccaccagtgtaagtccaagagtccaaaagctgaagaacttgaagtccgatgttcgagggcaggaagcatctagcatgggggaaagatgaaggctggaagactcagccagtgtaa-tccctccatgttcctctgcctgctttatttc----tagctacactggcagctgattagattgtgtctacccagattgagagtgggtctgcctctcccagtccactgattcaaatattagtctccgttgccaagaccctcacagagatacacccaggaacaatactttgtgtccttcagtccaatcaggttgacactcaatattaaccatcacaG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19139716 473 - 19675229 gacttacacaatcacaaggtgagg-tccacaataggccgtctgcaagctgagaagcagggaagctagtctgaatcccaagatctcaaaagtacggaagccgacagtgcagcctcaagtctatggccgaaggcccgagagcccctggcaaaccaccagtgtaagtccaagagtccaaaagctgaagaacttgaagtccgatgttcgagggcaggaagcatctagcacgggggaaagatgaaggctggaagactcagccagtgtaa-tccctccatgttcctctgcctgctttatttc----tagctacactggcagctgattagattgtgtctacccagattgagagtgggtctgcctctcccagtccactgattcaaatattagtctccgttgccaagaccctcacagagatacacccaggaacaatactttgtgtccttcagtccaatcaggttgacactcaatattaaccatcacaG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16375429 472 - 16847902 gactcacacgatcacaaggtgagg-tccacaataggccgtctgcaagctgagaagcagggaagctagtctgaatcccaagatctcaaaagtagggaagccgacagcgcagccttcagtctgtggccaaaggcccgagagcccctggcaaaccactggtgtgagtccaagagtccaaaagctgaagagcttggagtccgatgttcgagggcaggaagcatccagcacgggggaaagatgaaggctggaagactcagccagtgtaa-tccttccgtgttcctctgcctgcttta-ttc----tagctacactggcaactgattagattgtgtctacccagattgagagtgggtctgcctctcccagtccactgattcaaatattagtctccgttgccaacaccctcacagagatacacccaggaacaatactttgtgtccttcagtccaatcaggttaacactcaatattaaccatcacaG i cerAty1.NW_012004056v1 I 3072 C 0 s chlSab2.chr15 91345749 472 + 91754291 gactcacacgatcacaaggtgagg-tccacaataggccatctgcaagctgagaagcagggaagctagtctgaatcccaagatctcaaaagtagggaagccgacagtgcagccttaagtctgtggccaaaggcctgagagcccctggcaaaccaccggtgtaagtccgagagtccaaaagctgaagaacttgaaatccgatgttcgagggcaggaagcatctagcacgggggaaagatgaagcctggaagactcagctagtgtaa-tccttccatgttcctctgcctgcttta-ttc----tagctacactggcagctgattagattgtgtctacccagattgagagtgggtctgcctctcccagtccactgattcaaatattagtctccattgccaacaccctcacagagatacacccaggaacaatactttgtgtccttcagtccaatcaggttgacactcaatattaaccattgcaG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1411893 472 + 1977891 gactcacacgatcacaaggtgagg-tccacaataggccgtctgcaagctgagaagcagggaagctagtctgaatcccaagatctcaaaagtagggaagccgacagcgcagccttaagtctgtggccaaaggcccaagagcccctggcaaaccactggtgtaagtccaagagtccaaaagctgaagaacttgaagtccgatgttcgagggcaggaagcatctagcacgggggaaagatgaaggctggaagactcagccagtgtaa-tccttccgtgttcctctgcctgcttta-ttc----tagctacactggcaactgattagattgtgtctactcagattgagagtgggtctgcctctcccagtccactgatgcaaatattagtctccgttgccaacaccctcacagagatacacccaggaacaatactttgtgtccttcagtccaatcaggttgacactcaatattaaccatcacaG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7351008 464 - 7796314 gactcacacgatcacaaggtgagg-tccacaataggctgtctgcaagctgagaagcagggaagctagtctgaatcccaagatctcaaaagtagggaagccgacagcgcagccttaagtctgtggccaaaggcccgagatcccctggcaaaccaccggtgtaagtccaagagtccaaaagctgaagaacttgaagtccgatgttcgagggcaggaagcatctagcacgggagaaagatgaaggctggaagacttagccagtgtaa-tc--------ttcctctgcctgcttta-ttc----tagctacactggcagctgattagattgtgtctacccagattgagagtgggtctgcctctcccagtccactgattcaaatattagtctctgttgccaacaccctcacagagatacacccaggaacaatactttgtgtccttcagtccaatcaggttgacactccatattaactgtcacaG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73825761 469 + 74750902 gactcacatgatcatatggtgaagttccacaacaggctgtctgcaagctaagaagtaaggaagccggtctgaatcccaagacctcagaagtagggaagccgatagtgcagccttcagtctgtggccgagggcccaagggcccctggcaaaccgcaggtgtaagtgcaagagtcccacagctgaagaacctggagtctgatgtttgagggcaggaagcacccagcctgggaggatgatg-aggctggaagactcagcaagaggaactccttccatgttcctctgcctgcctta-ctc----gaggtatgctggcaactgataagattgtggctacccagattcagggtgggtctgcctctcccagt-cactgattcaaatattagcctccattggcaacagcctcac--agatacacccaggagcaacactttgcctcc-tcagtccaatcaagttgacactcactattagccatcacaG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17272453 467 - 17725628 gactcacatgatcacaaggtgaagttccacaacaggccgtctgcaagctaagaagtaaggaagctagtctgaatcccaagacctcagaaggagggaagccgatggtgcagccttcagtctgcagccaagggcccgagggcccagggcaaaccac-tgtgtcagtgcacgagtccaacagctgaagaacctggagtccgacatttgagggccggaagcacccagcgagggagaaagatg-aggttggaagactcagcaagtctaa-tccttccatgttcctctgcctgccttg-ctc----tgggcatgctggcagctgattagattgtgcctacccggattcagggtgggtctgcctcctctggtccactgactcaaatattagcctccgttggcaacaccctcac--agacaca-ccaggaacagtacttcgcatcc-tcagtccaatcaagttgacactcactatttgccatcgcaG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6361624 460 + 6778120 gactcacatgatcacaaggtgaagttccaccacaggctgtctgcaagctaag----aaagaagccggtctgaatcc---gacctcagaagcagggaagccgacagtgcagccttcagtctgtggccaagggcccgagggcccctgtcaaaccactggtgtaagtgcaagagtccaacagctgaagaacctcaagtccgacgtttgagggcaggaggcacccagcgtgggagaaacgtg-aggctggaagactcagcaagtctag--ccttccatgttcctctgcctgccttg-ctc----tgggtatgctggcagctgattagattgtgcctacccagattcagagtgggtctgcctctcccggtccactgattcaaatattagtctccattggcaacaccctcac--agacaca-ccaggaacaatacgttgcatcc-tcagtccaatcaagttgacactcactatttgccatcacaG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 8657 450 + 69927 gactcacgtgatcacaaggtgaagttccacaacaggccgtctgcaagctgagaagaaaggaagctggtctgaatcccaagaccgcagaagtagggaagccgacggtgcagccttcagtctgtggctg---------------------aatcactggcgtaagtgcaagagtccaacagctgaagagcctggagtccgatgtttgagggcaggaagcaccccgcgtgggagaaagatg-aggctggaaga--cagcaagtctag-tccttccgtgttcctctgcccgcctta-cacacgtcaggtgtgctggcagctggttagatggtgcctgcccaggttcagggtgggtctgcccctcccagcccactgattcaaatattagtctccgtcggcaacgccctcac--agatacacccaggaacaatactttgcatcc-tcggtccaatcaagttgacactcactattagccgtcacaG i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 14789255 114 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693732 24 - 6579706 I e canFam3.chr33 2315179 13 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I a score=278437.000000 s hg38.chr3_KI270934v1_alt 49797 25 + 163458 TCTTTGATCTGAGCAGACTCCAAAC-------- s panTro5.chr3 2522019 25 - 202621043 TCTTTGATCTGAGCAGACTCCAAAC-------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112170 25 - 190779 TCTTTGATCTGAGCAGACTCCAAAC-------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 63039 25 - 106623 TCTTTGATCTGAGCAGACTCCAAAC-------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2837765 25 - 123690457 ACTTTGATCTGAGCAGACTCCAAAC-------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2335576 33 - 204787373 TCTTTGATCTGAGCAGACTCCAAACTGTCTACG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192400740 33 - 192460366 TCTTTGATCTGAGCAGACTCCAAACTGTCTACG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19140189 33 - 19675229 TCTTTGATCTGAGCAGACTCCAAACGGTCTACG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16375901 33 - 16847902 TCTTTGATCTGAGCAGACTCCAAACTGTCTACG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91346221 33 + 91754291 TCTTTGATCTGAGCAGACTCCAAACTGTCTACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1412365 33 + 1977891 TCTTTGATCTGAAGAGACTCCAAACTGTCTACG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7351472 33 - 7796314 TCTTTGATCTGAGCAGACTCCAAACTGTCTACA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73826230 33 + 74750902 TCCTTGATCTGAGCAGACTCCAAACTGCCCACT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17272920 33 - 17725628 TCTTTGATCTGAGCAGACCCCAAACTGTCCGCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6362084 33 + 6778120 TCTTTGATCTGAGCAGACTCCAAACTGTCCACT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 9107 33 + 69927 TCTTGGATCTGAGCAGACTCCAGACTGTCCCCT i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 2315192 26 - 31377067 TCTCTGACCTGAGCAGACCCTAAACT------- i canFam3.chr33 I 13 C 0 e proCoq1.NW_012133858v1 14789255 114 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693732 24 - 6579706 I e otoGar3.GL873829 201730 12 + 608964 I a score=68960.000000 s hg38.chr3_KI270934v1_alt 49822 7 + 163458 TTACATG s panTro5.chr3 2522044 7 - 202621043 TTACATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112195 7 - 190779 TTACATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 63064 7 - 106623 TTACATG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2837790 7 - 123690457 TTATATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2335609 7 - 204787373 TTATATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192400773 7 - 192460366 TTATATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19140222 7 - 19675229 TTATATG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16375934 7 - 16847902 TTATATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91346254 7 + 91754291 TTACATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1412398 7 + 1977891 TTATATG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7351505 7 - 7796314 TTATATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73826263 7 + 74750902 TTATCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17272953 7 - 17725628 CTATATG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6362117 7 + 6778120 CTATATG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 9140 7 + 69927 TTATATG i aotNan1.NW_018503669v1 C 0 C 0 s dasNov3.JH569502 2693756 7 - 6579706 TTACACA i dasNov3.JH569502 I 24 C 0 e proCoq1.NW_012133858v1 14789255 114 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e micMur3.chr1 88379529 3613 + 114275543 I e canFam3.chr33 2315218 0 - 31377067 C e otoGar3.GL873829 201730 12 + 608964 I a score=1240400.000000 s hg38.chr3_KI270934v1_alt 49829 108 + 163458 GAGAATGACTTCTCC--CAATAGGTGAAGCCACTCTCCTACATACAAAGCTGTAGCTTTACCCTCATATGCCCCAAAGTGGAATGTAATGAAGTCTCCATACAAAACTGC s panTro5.chr3 2522051 108 - 202621043 GAGAATGACTTCTCC--CAATAGGTGAAGCCACTCTCCTATGTACAAAGCTGTAGCTTTACCCTCATATGCCCCAAAGTGGAATGTAATGAAGTCTCCATACAAAACTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112202 108 - 190779 GAGAATGACTTCTCC--CAATAGGTGAAGCCACTCTCCTATGTACAAAGCTGTAGCTTTACCCTCATATGCCCCAAAGTGGAATGTAATGAAGTCTCCATACAAAACTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 63071 108 - 106623 GAGAATTACTTCTCC--CAATAGGTGAAGCCACTCTTCTATGTACAAAGCTGTAGCTTTACCCTCATATGCCCCAAAGTGGAATGTAATGAAGTCTCCATACAAAACTGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2837797 108 - 123690457 GAGAATGACTTCTCC--CAATAGGTGAAGCCACTCTCCTATGTACAAAGCTGTAGCTTTACCCTCATATGGCCCAAAGTGGAATGTAATGGAATCTCCATACAAAACCGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2335616 108 - 204787373 GAGAATGACTTCTCC--CAGTGGGTGATGCCACTCTCCTATGTACAAAGCTGTAGCTTTACCCTCATATGCCCCAAAGTGGAATGTAATGAAGTCTCCATACGAAACCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192400780 108 - 192460366 GAGAATGACTTCTCC--CAATAGGTGATGCCACTCTCCTATGTACAAAGCTGTAGCTTTACCCTCATATGCCCCAAAGTGGAATGTAATGAAGTCTCCATACGAAACCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19140229 108 - 19675229 GAGAATGACTTCTCC--CAATAGGTGATGCCACTCTCCTATGTACAAAGCTGTAGCTTTACCCTCATATGCCCCAAAGTGGAATGTAATGAAGTCTCCATACGAAACCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16375941 108 - 16847902 GAGAATGACTTCTCC--CAATAGGTGAAGTCACTCTCCTATTTACAAAGCTGTAGCTTTACCCTCATATGCCCCAAAGTGGAATGTAATGAAGTCTCCATACAAAACCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91346261 108 + 91754291 GAGAATGACTTCTCC--CAATAGGTGAAGTCACTCTCCTATGTACAAAGCTGTAGCTTTACCCTCATATGCCCCAAAGTGGAATGTAATGAAGTCTCTATACAAAACCAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1412405 108 + 1977891 GAGAATGACTTCTCC--CAATAGGTGAAGTCACTCTCCTATATACAAAGCTGTGGCTTTACCCTCATATGCCCCAAAGTGGAATGTAATGAAGTCTCCATACAAAACCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7351512 108 - 7796314 GAGAATGACTTCTCC--CAATAGGTGAAGCCACTCTCCTATGTACAAAGCTGTGGCTTTACCCTCATATGCCCCAAAATGGAATGTAATGAAGTCTTCATACAAAACCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73826270 107 + 74750902 GAGGAGGA-TTCCCC--CAGTGGGCAAAGCCACCCTCTTATGTACAGAGCCGTAGCTCTACCACCATACTCCCCAAAGTGTAATGTAATGAAGTCTCCATACAAAACCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17272960 108 - 17725628 GAGAATGACTTCTCC--CAGTAGTCGAAGCCACTGTCTTACGTACAGAGCTGTAGCTTTACCATCAGACTCCTCAAAGTGTAATGTAATGAAGTCTCCATACAAAACTAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6362124 108 + 6778120 GAGAATGAGTTCTCC--CAATAGGCAAAGCCACTGTCTTATGTACAGAGCTGTAGCTTTACCATTAGACTCCCCAAAGTGCAATGTAATGAAGTCTCCATACAAAAACAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 9147 105 + 69927 GAGAATGACTTCTCC--CAATAGGCGAAGCTGGTCTCTTATGCACGGAGCTATAG-TTTACCATCATACTCCCCAAAGTGCAATGTAATGAAGTCTCCACACAAAAC--C i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14789369 103 - 22200726 GAGAATGACTTCTTC--CAGCTGGTGAAGCCACTCTTCTGCTTATAAGGCTATAGCTTTACCCTAATGAGCCCCAAAG-----TGTAATCAAGTCTCCATATAAAATCAT i proCoq1.NW_012133858v1 I 114 C 0 s canFam3.chr33 2315218 101 - 31377067 ----ATGCTTTTCTTAACAGTAGGTGAAGCCCCTCCCATACATGCAACGTTGTGACTTTACCCTCAAACACCCCAAAG-----TGTAATCAAGCCTCCATATAAAACCAC i canFam3.chr33 C 0 I 127 s dasNov3.JH569502 2693763 101 - 6579706 GAGAGTGGCTTTTCC--CAGCAGGCAAA-CCAC-CCCTAGTGCCCAGGGCTGTGGTTCCACCTTCAGAGGCCTTGAAG-----TGTAATCAGGTCTCAATAGAAAACCAT i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32782662 927 + 98207768 I e micMur3.chr1 88379529 3613 + 114275543 I e otoGar3.GL873829 201730 12 + 608964 I a score=269660.000000 s hg38.chr3_KI270934v1_alt 49937 19 + 163458 AGTCACAGCATTCATTTAT s panTro5.chr3 2522159 19 - 202621043 AGTCACAGCATTCATTTAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112310 19 - 190779 AGTCACAGCATTCATTTAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 63179 19 - 106623 AGTCACAGCATTCATTTAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2837905 19 - 123690457 AGTCACAGCATTCATTTAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2335724 19 - 204787373 AGTCACAACATTCATTTAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192400888 19 - 192460366 AGTCACAACATTCATTTAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19140337 19 - 19675229 AGTCACAACATTCATTTAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16376049 19 - 16847902 AGTCACAACATTCATTTAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91346369 19 + 91754291 AGTCACAACATTCATTTAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1412513 19 + 1977891 AGTCACAACATTCATTTAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7351620 19 - 7796314 AGTCACAACATTCATTTAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73826377 19 + 74750902 AGTCACAGCATTCATTTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17273068 19 - 17725628 AGTCACAGCATTCATTTAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6362232 19 + 6778120 AGTCACAGCATTCATTTAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 9252 19 + 69927 AGTCACAGCATTCATTTCT i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14789472 19 - 22200726 AGCCGCAGCATTCATTTAT i proCoq1.NW_012133858v1 C 0 C 0 s canFam3.chr33 2315446 19 - 31377067 AATCCTAGCATTCATTTAT i canFam3.chr33 I 127 C 0 s dasNov3.JH569502 2693864 19 - 6579706 GGTCACAGCATTCATTTAT i dasNov3.JH569502 C 0 I 1 e mm10.chr16 32782662 927 + 98207768 I e micMur3.chr1 88379529 3613 + 114275543 I e otoGar3.GL873829 201730 12 + 608964 I a score=2609650.000000 s hg38.chr3_KI270934v1_alt 49956 256 + 163458 CAAGAagcaagcacacagcacagatgagttcgctggtgaattttagcagatatttaaggggaa-ataatacctattttctgcaatcttttccagaagatagaagcaggaggaatacttcctaagtcattt------gtcactgtcaccctaatgccaaaacgggacaaagacattacaagac-----gactatagaccaatatatctca----catagatgcaaaaattaccaacaaaatattagcaaatacagttcaacaatatgtaaaaa s panTro5.chr3 2522178 256 - 202621043 CAAGAagcaagcacacagcacagatgagttcgctggtgaattttaccaaatatttaaggggaa-ataatacctattttctgcaatcttttccagaagatagaagcaggaggaatatttcctaagtcattt------gtcactgtcaccctaatgccaaaaccagacaaagacattacaagac-----gactatagaccaatatctctca----catagatgcaaaaattaccaacaaaatattagcaaatacagttcaacaatatgtaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112329 256 - 190779 CAAGAagcaagcacacagcacagatgagttcgctggtgaattttaccaaatatttaaggggaa-ataatacctattttctgcaatcttttccagaagatagaagcaggaggaatatttcctaagtcattt------gtcactgtcaccctaatgccaaaaccagacaaagacattacaagac-----gactatagaccaatatctctca----catagatgcaaaaattaccaacaaaatattagcaaatacagttcaacaatatgtaaaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 63198 256 - 106623 CAAGAagcaagcacgcagcacagatgagttcgctggtgaattttaccaaatatttaaggggaa-ataatacctattttctgcaatcttttccagaagatagaagcaggaggaatacttcctaagtcattt------gtcactgtcaccctaatgccaaaaccagacaaagacattacaagac-----gactatagaccaatatctctca----catagatgcaaaaattaccaacaaaatattagcaaatacagttcaacaatatgtaaaaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2837924 256 - 123690457 Caagaagcaagcacacagcacagatgagttcgctggtgcattttaccgaatatttaaggggaa-ataatacctattttctgcaatcttttccagaagatagaagcaggaggaatacttcctaagtcattt------gtcagtgtcaccctagtaccaaaaccagacaaagacattacaagat-----gactatagaccaatatctctca----cacagatgcaaaaattaccaacaaaatattagcaaatagagttcaacaatatgtaaaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2335743 260 - 204787373 CAAGAagtaagcacacagcatagatgacttcgctggtgaattttaccaaatatttaagggaaa-ataatacctattttctgcaatcttttctagaagacagaagcagcaggaatacttcctaagtcattt------gtcagtgtcaccctaataccaaaaccagacaaaaccattacaagacga-ctgactatagaccaatatctctca----catagatgcaaaaattaccaacaaaatattagcaaattgagttcaacaatacgtaaaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192400907 260 - 192460366 CAAGAagtaagcacacagcatagatgacttcgctggtgaattttaccaaatatttaagggaaa-ataatacctattttctgcaatcttttctagaagacagaagcagcaggaatacttcctaagtcattt------gtcagtgtcaccctaataccaaaaccagacaaaaccattacaagacga-ctgactatagaccaatatctctca----catagatgcaaaaattaccaaccaaatattagcaaattgagttcaacaatacgtaaaaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19140356 260 - 19675229 CAAGAagtaagcacacagcatagatgacttcgctggtgaattttaccaaatatttaagggaaa-ataatacctattttctgcaatcttttctagaagacagaagcagcaggaatacttcctaagtcattt------gtcagtgtcaccctaataccaaaaccagacaaaaccattacaagacga-ctgactatagaccaatatctctca----catagatgcaaaaattaccaacaaaatattagcaaattgagttcaacaatacgtaaaaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16376068 250 - 16847902 CAAGAAGTAAGCACACAGCACACatgacttcgctggtggattttaccaaatattta----------aatacctattttctgcaatcttttctggaagacagaagcaggaggaatacttcctaagtcattt------gtcagtgtcaccctaatgccaaaaccagacaaaaacattacaagacga-ctgactatagaccaatatctctca----catagatgc-aaaattaccaacaaaatattagcaaattgagttcaacaatgcgtacaaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91346388 260 + 91754291 CAAGAagcaagcacacaacatagatgacttagctggtgaattttaccaaatatttaaggggaa-ataatgcctattttctataatcttttctggaagacagaagcaggaggaatacttcctaagtcattt------gtcagtgtcaccctaataccaaaaccagacaaaaacattacaagacaa-ctgactatagaccaatatctctca----catagatgcaaaaattaccaacaaaatattagcaaattgagttcaacaatacgtaaaaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1412532 260 + 1977891 CAAGAAGTAAGCACACAGCACACatgacttcactggtggattttaccaaatatttaaggggaa-ataatacctattttctgcaatcttttctggaagacagaagcaggaggaatacttcctaagtcattt------gtcagtgtcaccctaatgccaaaaccaaacaaaaacattacaagacga-ctgactatagaccaatatctctca----catagatgcaaaaattaccaacaaaatattagcaaattgagttcaacaatgcgtaaaaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7351639 254 - 7796314 CAAGAAGTAAGCACACAGCACAgatgacttc------gaattttaccaaatatttaaggggaa-ataatacctattttctgtaatcttttctggaagacagaagcaggaggaatacttcctaagtcattt------gtcactgtcaccctaataccaaaaccagacaaaaacattacaacacga-ctgactatagaccaatatctctca----catagatgcaaaaattatcaataaaatattaacaaattgagttcaacaatatgtaaaaa i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73826396 246 + 74750902 CAAGAATTaagcacacaacacagaggggttcgctggtgaattgtgcaaaatatttaaggagaa---aatacctattttgtgcaatcttttccagaagacagaagc---aggactaccccctaagtcattg------gtcagtgtcaccctaataccgaaac----caaagacgttaccagaa-----gactatagaccagtatctgtca----cgaagatgcaaaaattagcaac-aaatattagcaaatcaagttcaacaatatataaaaa i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17273087 244 - 17725628 CAAGAATTaagcacacaacacagaggggttcgctggtgaattataccaaatatttaaggagaaaataatacctattttctgcaatcttttccagaagacagaagc---aggactactccctaagtcatt------------tgtcactctaataccaaaac----caaagacatcaccagaa-----gactacagaccagtacctctca----caaagatgcaaaaattagcaacaaaatactagcaaatcaagttcaacaatatgtaaaaa i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6362251 246 + 6778120 CAAGAATTaagcacacaacacagaggggttcactggtgaattataccaaatatttaaggagaaaataatacctattttctgcaatcttttccagaagacagaagcaggaggactactccctaagtcatt------------tgtcactctaataccaaaac----caaagacattaccagaa-----gactaaagaccagtatctctca----caaagatgcaaaaattagcaacaaaatattagcaaatcaagttcaac-atatgtaaaaa i cebCap1.NW_016107444v1 C 0 I 3308 s aotNan1.NW_018503669v1 9271 251 + 69927 CAAGAATTCAGCACACAACAcagaggggttcgctggagaattttaccaaatatttcaggagaaaataatacctatcttctgccatcttttccagaagagagaagcaggaggactactccctgagtcgttt------gtcagtgtcactctcacaccaaaac----caaagacagtaccagaa-----ggctacaggccagtagctctca------aagatgcaaaaattagcaacaaaatactagcaaatcaagttcaacaatatataaaaa i aotNan1.NW_018503669v1 C 0 I 2 s proCoq1.NW_012133858v1 14789491 247 - 22200726 CAAGAATTAAGc---------agatgggttcactggtgaattctaccaaacatttaaggaataaattataccaactctctacaatcttttccagaagatagaagcagagggaatacttcctaagtcattc------at----------ccaataccaaaatcagacaaagacattataaaaaaagaaaactacagaccaatatctctcatgaacatagatgcaaaaatactcaacaaaatattagtaaattgaatccaacaatgtataaaaa i proCoq1.NW_012133858v1 C 0 C 0 s canFam3.chr33 2315465 265 - 31377067 CAAGAATTaagtacatagcccaaatggattcactggtgagttctaccaaacactgcaggaagagactctttcagttctctataatctctttcagaagattgaagcagagggaatacctcctaactcagtctatgaggccagcgttaccct-ataccaaaaccagaaagaaaaaaaaaaaaa------aaccctacaggaatatctctcatgaacatagatgcaaaaatcttcaacaaaacattagcaaataaaatccaacagtgaataaaaa i canFam3.chr33 C 0 C 0 e mm10.chr16 32782662 927 + 98207768 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693883 1 - 6579706 I e otoGar3.GL873829 201730 12 + 608964 I a score=175720.000000 s hg38.chr3_KI270934v1_alt 50212 17 + 163458 gaattataggccatgac s panTro5.chr3 2522434 17 - 202621043 gaattataggccatgac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112585 17 - 190779 gaattataggccatgac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 63454 17 - 106623 gaattataggccatgac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2838180 17 - 123690457 gaattataggccatgac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2336003 17 - 204787373 gaattataggccatcac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192401167 17 - 192460366 gaattataggccatcac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19140616 17 - 19675229 gaattataggccatcac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16376318 17 - 16847902 gaattataggctatcac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91346648 17 + 91754291 gaattataggccatcac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1412792 17 + 1977891 gaattataggctatcac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7351893 17 - 7796314 gaattataggcgatcac i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73826642 17 + 74750902 gaattataggccatgac i calJac3.chr17 C 0 I 3482 s saiBol1.JH378146 17273331 17 - 17725628 gaattataggccatgac i saiBol1.JH378146 C 0 I 3058 s aotNan1.NW_018503669v1 9524 17 + 69927 gaattataggccatgac i aotNan1.NW_018503669v1 I 2 I 2356 s proCoq1.NW_012133858v1 14789738 17 - 22200726 taattatgtgccacaac i proCoq1.NW_012133858v1 C 0 C 0 s canFam3.chr33 2315730 17 - 31377067 gaattacatgccatgaa i canFam3.chr33 C 0 C 0 e mm10.chr16 32782662 927 + 98207768 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693883 1 - 6579706 I e cebCap1.NW_016107444v1 6362497 3308 + 6778120 I e otoGar3.GL873829 201730 12 + 608964 I a score=687011.000000 s hg38.chr3_KI270934v1_alt 50229 93 + 163458 caacagagatttatcccaggtatgcaagactggttcaatattcaaaaatcagctaatgcaatccgttacatcaacaggctagagaataaaaat s panTro5.chr3 2522451 93 - 202621043 caacagagatttatcccaggtatgcaagactggttcaatattcaaaaatcagctaatgcaatccattacatcaacaggctagagaagaaaaat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112602 93 - 190779 caacagagatttatcccaggtatgcaagactggttcaatattcaaaaatcagctaatgcaatccattacatcaacaggctagagaagaaaaat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 63471 93 - 106623 ccacagagatttatcccaggtatgcaagactggttcaatattcaaaaatcagctaatgcaatccgttacatcaacaggctagagaagaaaaat i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2838197 93 - 123690457 caacagggatttatcccaggtatgcaagactagttcactattcaaaaatcagctaatgcaatccgtgacatcaacaggctagagaagaaaaat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2336020 93 - 204787373 caatagggatttatcccaggtatgcaagactggttcaatattcaaaaatcagctaatgtaatctgttacatcaacaagctagagaagaaaaat i rheMac8.chr2 C 0 I 461 s macFas5.chr2 192401184 93 - 192460366 caatagggatttatcccaggtatgcaagactggttcaatattcaaaaatcagctaatgtaatctgttacatcaacaagctagagaagaaaaat i macFas5.chr2 C 0 I 449 s macNem1.NW_012014355v1 19140633 93 - 19675229 caatagggatttatcccaggtatgcaagactggttcaatattcaaaaatcagctaatgtaatctgttacatcaacaagctagagaagaaaaat i macNem1.NW_012014355v1 C 0 I 460 s cerAty1.NW_012004056v1 16376335 93 - 16847902 caacagggatttatcccaggtatgcaagactggttcaatattcaaaaatcagctaatgtaatctgttacatcaacaagctagagaagaaaaat i cerAty1.NW_012004056v1 C 0 I 203 s chlSab2.chr15 91346665 93 + 91754291 caacagggatttatcccaggtatgcaagactggttcaatattcaaaaatcagctaatgtaatctgttacatcaacaaactagagaagaaaaat i chlSab2.chr15 C 0 I 203 s manLeu1.NW_012102020v1 1412809 93 + 1977891 caacagggatttatcccaggtatgcaagactggttcaatattcaaaaatcagctaatgtaatctgttacatcaacaagctagagaagaaaaat i manLeu1.NW_012102020v1 C 0 I 203 s colAng1.NW_012118932v1 7351910 93 - 7796314 caacagggatttatcccaggtatgcaagactggttcaatattcaaaaatcagctaatataatctgttacatcaacaagctagagaagaaaaat i colAng1.NW_012118932v1 C 0 I 3110 s proCoq1.NW_012133858v1 14789755 93 - 22200726 caagtgggatttatcccaggtatgcaaggctagttcaaaattcaaaacttagctaatgtaatccatcatattaacaggctaaagaagaaaaat i proCoq1.NW_012133858v1 C 0 C 0 s canFam3.chr33 2315747 92 - 31377067 caagtggcatttagtccaggt-tgcaaggctgattcaacaatcgaaaatcaattagtgcaatctatcacatcaacagaataaagaagaaaaat i canFam3.chr33 C 0 C 0 e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693883 1 - 6579706 I e saiBol1.JH378146 17273348 3058 - 17725628 I e calJac3.chr17 73826659 3482 + 74750902 I e cebCap1.NW_016107444v1 6362497 3308 + 6778120 I e otoGar3.GL873829 201730 12 + 608964 I a score=4011.000000 s hg38.chr3_KI270934v1_alt 50322 2 + 163458 ca s panTro5.chr3 2522544 2 - 202621043 ca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112695 2 - 190779 ca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 63564 2 - 106623 ca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2838290 2 - 123690457 ca i nomLeu3.chr11 C 0 C 0 s proCoq1.NW_012133858v1 14789848 2 - 22200726 ca i proCoq1.NW_012133858v1 C 0 I 591 s canFam3.chr33 2315839 2 - 31377067 ca i canFam3.chr33 C 0 C 0 e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693883 1 - 6579706 I e macNem1.NW_012014355v1 19140726 460 - 19675229 I e saiBol1.JH378146 17273348 3058 - 17725628 I e calJac3.chr17 73826659 3482 + 74750902 I e cebCap1.NW_016107444v1 6362497 3308 + 6778120 I e otoGar3.GL873829 201730 12 + 608964 I e colAng1.NW_012118932v1 7352003 3110 - 7796314 I e manLeu1.NW_012102020v1 1412902 203 + 1977891 I e chlSab2.chr15 91346758 203 + 91754291 I e cerAty1.NW_012004056v1 16376428 203 - 16847902 I e macFas5.chr2 192401277 449 - 192460366 I e rheMac8.chr2 2336113 461 - 204787373 I a score=7805.000000 s hg38.chr3_KI270934v1_alt 50324 6 + 163458 catgat s panTro5.chr3 2522546 6 - 202621043 catgat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112697 6 - 190779 catgat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 63566 6 - 106623 catgat i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2838292 6 - 123690457 catgat i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 2315841 6 - 31377067 tatgat i canFam3.chr33 C 0 I 669 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693883 1 - 6579706 I e macNem1.NW_012014355v1 19140726 460 - 19675229 I e saiBol1.JH378146 17273348 3058 - 17725628 I e calJac3.chr17 73826659 3482 + 74750902 I e cebCap1.NW_016107444v1 6362497 3308 + 6778120 I e otoGar3.GL873829 201730 12 + 608964 I e colAng1.NW_012118932v1 7352003 3110 - 7796314 I e manLeu1.NW_012102020v1 1412902 203 + 1977891 I e chlSab2.chr15 91346758 203 + 91754291 I e cerAty1.NW_012004056v1 16376428 203 - 16847902 I e macFas5.chr2 192401277 449 - 192460366 I e rheMac8.chr2 2336113 461 - 204787373 I a score=8525.000000 s hg38.chr3_KI270934v1_alt 50330 11 + 163458 cggccaggcat s panTro5.chr3 2522552 11 - 202621043 cggccaggcgt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112703 11 - 190779 cggccaggcgt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 63572 11 - 106623 cggccaggcgt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2838298 11 - 123690457 cggctgggcac i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693883 1 - 6579706 I e macNem1.NW_012014355v1 19140726 460 - 19675229 I e saiBol1.JH378146 17273348 3058 - 17725628 I e calJac3.chr17 73826659 3482 + 74750902 I e cebCap1.NW_016107444v1 6362497 3308 + 6778120 I e canFam3.chr33 2315847 669 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I e colAng1.NW_012118932v1 7352003 3110 - 7796314 I e manLeu1.NW_012102020v1 1412902 203 + 1977891 I e chlSab2.chr15 91346758 203 + 91754291 I e cerAty1.NW_012004056v1 16376428 203 - 16847902 I e macFas5.chr2 192401277 449 - 192460366 I e rheMac8.chr2 2336113 461 - 204787373 I a score=593358.000000 s hg38.chr3_KI270934v1_alt 50341 293 + 163458 ggtggctcacgtctgtaatcccagcactttgggaggccgaggcaggcggatcacgagttcaggagatcgagaccatcctggctaacacggtgaaaccccatctctact-aaaaacacaaaaaattagctgggcgtggtggtgggcgcctgtagtcccagctgcttgggaggctgaggcaggagaatggtgtgaacccaggaggcggagattgcagtgagccgagatcacaccactgcactccagcctgggtgacagagtgagactctgtctcaaaaaataaataaataaataaa s panTro5.chr3 2522563 281 - 202621043 ggtggctcacgtctgtaatcccagcactttgggaggccgaggtgggcggatcacgaggtcgggagatcgagactatcctggctaacacggtgaaaccccgtctctact-aaaaacacaaaaaattagctgggcgtggtggtgggcgcctgtagtcccagctgcttgggaggctgaggcaggagaatggcgtgaacccaggaggtggagattgcagtgagccgagatcacaccactgcactccagcctgggtgacagagtgagactctgtctcaaaaaaaaaa------------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112714 280 - 190779 ggtggctcacgtctgtaatcccagcactttgggaggccgaggtgggcggatcacgaggtcgggagatcgagactatcctggctaacacggtgaaaccccgtctctact-aaaaacacaaaaaattagctgggcgtggtggtgggcgcctgtagtcccagctgcttgggaggctgaggcaggagaatggcgtgaacccaggaggtggagattgcagtgagccgagatcacaccaccgcactccagcctgggtgacagagtgagactctgtctcaaaaaataa------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 63583 284 - 106623 ggtggctcacgtctgtaatcccagcactttgggaggccgaggtgggcggatcacgaggtcaggagatcgagactatcctggctaacacggtgaaaccccgtctctact-aaaaacacaaaaaattagctgggcgtggtggcgggcgcctgtagtcccagctgcttgggaggctgaggcaggagaatggcgtgaacccaggaggcagagattgcagtgagccgagatcacaccactgcactccagcctgggtgacagagtgagactctgtctcaaaaaaaaaaaaa--------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2838309 293 - 123690457 ggtggcttacgcctgtaatcccagcactttgggaggttgaggcaggtggatcacgaggtcaggagatcaagaccatcctggctaacacggtgaaaccctgtctctact-aaaaacacaaaaaattagctgggcgtggtggcgggcacctgtagtcccaactacttgggaggctgaggcaggagaatggcgtgaacccaggaggtggagattgcagggagctgagatcgtgccactgcactccaggctgggcgacagagcgagactccgtctcaagaaaaaaaaagaagaagaaa i nomLeu3.chr11 C 0 I 2287 s cerAty1.NW_012004056v1 16376631 268 - 16847902 ggtggctcatgcctataatcccagcactttgggaggctgaggcgggcgaatcacaaggttaggaattcgagaccagcctggccaatatggtgaaaccctgtctctatt-aaaaatacaaagag-tagccaggcgtggtggtcagcgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacccgagaggcggaggttgcagtgagctgagaacgcaccactgcattccagcctgggcgacagagtgagactctgtc------------------------ i cerAty1.NW_012004056v1 I 203 C 0 s chlSab2.chr15 91346961 267 + 91754291 ggtggctcatgcctataatcccagcactttggaaggctgaggcgggcgaatcacaaggttaggaattcaagaccagcctggccaatatggtgaaaccctgtctctatt-aaaaatacaaggag-tagccaggcatggtggtcagcgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacccgagaggcgaaggttgcagtgagctgagaacgcacc-ctgcattccagcctgggcgacagagtgagactctgtc------------------------ i chlSab2.chr15 I 203 C 0 s manLeu1.NW_012102020v1 1413105 269 + 1977891 ggtggctcatgcctataatcccagcactttgggaggctgaggcgggcgaatcacaaggttaggaattcgagaccagcctggccaatatggtgaaaccctgtctctattaaaaaatacaaagag-tagccaggcgtggtggtcagcgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacccgagaggcggaggttgcagtgagctgagaacgcaccactgcattccagcctgggcgacagagtgagaccctgtc------------------------ i manLeu1.NW_012102020v1 I 203 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693883 1 - 6579706 I e macNem1.NW_012014355v1 19140726 460 - 19675229 I e saiBol1.JH378146 17273348 3058 - 17725628 I e calJac3.chr17 73826659 3482 + 74750902 I e cebCap1.NW_016107444v1 6362497 3308 + 6778120 I e canFam3.chr33 2315847 669 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I e colAng1.NW_012118932v1 7352003 3110 - 7796314 I e macFas5.chr2 192401277 449 - 192460366 I e rheMac8.chr2 2336113 461 - 204787373 I a score=1948788.000000 s hg38.chr3_KI270934v1_alt 50634 1119 + 163458 taaataaataaataaataaataaaagaatatctacaaaaacctacagctaacatcatccttaacggtgagaaattagatgctttcccctaagattagtaacaaggcaagaacgtcccctctcaccatcgattctcaacatcctgctggaggtcttggccaatgcaactagacacaaaagggaaataaaaggtatacagaataaaaaggaagaaacaaaactg-ctttgttcacagatgacacaatcatctatgttaaaaaatctaagagttgacaaaaggaaaaaaccccagaacaaagaagcaatttcagacaagtttcatgatataaggttagtgtcctaacgtcaacagctttcgtgtgtgccagcaaagaacaattggaatttagaattaaaaatatttgagcaagacaggaaacaaaaaaa--gaaaaatgaataataaaattaaatacatatgaccatttacattagcatcccccaaaatgaaatactgaggtgtaaatgtaacaaaatatgtacaagatctatatgagaaaaactataaaactctgatgaaagatatcaaagaacttcataaatgggatgacattctatgtttatgaacaggaagactctttttttttttttttttt------gagatggagtctccctctgtcacccaggctggagtgcagtggcaccatctcagctcactgcaacctcagcctcccgggttcaagcaattctcttgcctcagcctcatgagtagctgggattacaggcacacaccaccacgcctggctaatttttttttgtatttttagtagagatagggtttcggcattttggccaggctgatctcaaactcctgacctcaggtgatccaccctcctcggcatcccaaagtgctgggattataggtgtgcgccagcacaacaggccagaagactcaatattattaagatagcagttctcaatattatcaagatagcagcagatcaagatagccaacttgatctacagattctacataatgacacaatcttaatcaaaatcccaggaagttatttgtagatatggataaactggctctaaagtttatgtggagaggcaaaagatccaaaatagccaaatcaatattgat s panTro5.chr3 2522844 1112 - 202621043 -------ataaataaataaataaaagaatatctacaaaaacctacagctaacatcatccttaacggtgagaaactagatgctttcccctaagattaggaacaaggcaagaatgtcccctctcaccatcgattctcaacatcctgctggaggtcttggccaatgcaactagacacaaaagggaaataaaaggtatacagaataaaaaggaagaaacaaaactg-ctttgttcacagatgacacaatcatctatgtaaaaaaatctaagagttgacaaaaggaaaaaaccccagaacaaagaagcaatttcagacaagtttcatgatataaggttagtgtcctaacgtcaacagctttcgtgtgtgccagcaaagaacaattggaatttagaattaaaaacatttgagcaagacaggaaacaaaaaaaaagaaaaactaataataaaattaaatacacatgaccatttacattagcatcccccaaaatgaaatactgaggtgtaaatgtaacaaaatatgtacaagatctatatgagaaaaactataaaactctgatgaaagatatcaaagaacctcataaatgggatgacattctatatttatgaacaggaagactcatttttttttttttttt-------gcgacggagtctccctctgtcacccaggctggagtgcagtggcgccatctcagctcactgcaacctcagcctcccgggttcaagcaattctcttgcctcagcctcatgagtagctgggattacaggcacacaccaccacgcctggctaatttttttt-gtatttttagtagagatagggtttcggcattttggccaggctgatctcaaactcctgatctcaggtgatccaccctcctcggcatcccaaagtgctgggattataggtgtgcgccagcacaccaggccagaagactcaatattattaagatagcagttctcaatattatcaagatagcagcagatcaagatagccaacttgatctacagattctacatcataacacaatcttaatcaaaatcccaggaagttatttgtagatattgataaactggctctaaagtttatgtggagaggcaaaagatccaaaatagccaaatcaatattgat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112994 1114 - 190779 -------ataaataaataaataaaagaatatctacaaaaacctacagctaacatcatccttaacggtgagaaactagatgctttcccctaagattaggaacaaggcaagaatgtcccctctcaccatcgattctcaacatcctgctggaggtcttggccaatgcaactagacacaaaagggaaataaaaggtatacagaataaaaaggaagaaacaaaactg-ctttgttcacagatgacacaatcatctatgtaaaaaaatctaagagttgacaaaaggaaaaaaccccagaacaaagaagcaatttcagacaagtttcatgatataaggttagtgtcctaacgtcaacagctttcgtgtgtgccagcaaagaacaattggaatttagaattaaaaacatttgagcaagacaggaaacaaaaaaa-agaaaaactaataataaaattaaatacacatgaccatttacattagcatcccccaaaatgaaatactgaggtgtaaatgtaacaaaatatgtacaagatctatatgagaaaaactataaaactctgatgaaagatatcaaagaacctcataaatgggatgacattctatatttatgaacaggaagactctatttttttttttttttt----tgtagacggagtctccctctgtcacccaggctggagtgcagtggcgccatctcagctcactgcaacctcagcctcccgggttcaagcaattctcttgcctcagcctcatgagtagctgggattacaggcacacaccaccacgcctggctaatttttttt-gtatttttagtagagatagggtttcggcattttggccaggctgatctcaaactcctgatctcaggtgatccaccctcctcggcatcccaaagtgctgggattataggtgtgcaccagcacaccaggccagaagactcaatattattaagatagcagttctcaatattatcaagatagcagcagatcaagatagccaacttgatctacagattctacataataacacaatcttaatcaaaatcccaggaagttatttgtagatattgataaactggctctaaagtttatgtggagaggcaaaagatccaaaatagccaaatcaatattgat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 63867 1117 - 106623 -------ataaataaataaataaaagaatatctacaaaaacctacagctaacatcatccttaacggtgagaaactagatgctttcccctaagattaggaacaaggcaagaatgtcccctctcaccatcgattctcaacatcctgctggaggtcgtggccaatgcaactagatacaaaagggaaataaaaggtattcagaataaaaaggaagaaacaaaactg-ctttgttcacagatgacacaatcatctatgtaaaaaaatctaagagttgacaaaaggaaaaaaccccagaacaaagaagcaatttcagacaagtttcatgatataaggttaatgtcctaacggcaacagctttcgtgtgtgccagcaaagaacaattggaatttagaattaaaaacatttgagcaagacaggaaacaaaaaaa--gaaaaactaataataaaattaaatacacatgaccatttacattagcatcccccaaaatgaaatactgaggtgtaaatgtaacaaaatatgtacaagatgtatatgagaaaaactataaaactctgatgaaagatatcaaagaacttcataaatgggatgacattctatatttatgcacaggaagactcatttttttttttttttttttttttgagacggagtctccctctgtcacccaggctggagtgcagtggcgccatctcagctcactgcaacctcagcctcccgggttcaagcaattctcttgcctcagcctcatgagtagctgggattacaggcacacaccaccatgcctggctaatttttttt-gtatttttagtagagatagggttttggcattttggccaggctgatctcaaactcctgacctcaggtgatccaccctcctcggcatcccaaagtgctgggattataggtgtgcgccagcacaccaggccagaagactcaatattattaagatagcagttctcaatattatcaagatagcagcagatcaagatagccaacttgatctacagattctacataataacacaatcttaatcaaaatcccaggaagttatttgtagatattgataaactggctctaaagtttatgtggagaggcaaaagatccaaaatagccaaatcaatattgat i gorGor5.CYUI01000576v1 C 0 C 0 s cerAty1.NW_012004056v1 16376899 1084 - 16847902 ----taaataaataaataaataaaataatatctacaaaaaccaactgctaacatcatccttaacggtgagaaactagatgctttcccctaagatgaggaagaaggccaggatgtcccctcccacca---attttcaacatcatactggaggtcttggccaatgcaacaagacacaaaagggaaataaaaggtatacagaataaaaaggaagaaataaaactgtttttgttcacagatgacacaatcatctatgtaaaaaaatctaagagttgacaaaaggaaaaaaccccagaacaaagaagcaatttcagccaagtttcatgatataaggttagtgtcccagcatcaatggctttcatgtgtgccagcaaagaacaattggaatttagaattaaaaacatttgagcaagacaggaagcaaaaaaa-agaaaaactaataatgaaattaaatacacattaccatttacgttagcatcccccaaaatgaaatactgaggtataaatgtaacaaaatatgtacaagatctatatgagaaaaactataaaactctgatgaaagatatcaaagaacttcataaatgggatgacattctatgtttatggacaggaagattcaaatttattttattttat--ttttgagacggagtctccctctgtcacccaggctggagtgcagtggcgccatctcagctcactgcaacctcagcctcccag--------------------------------gtagctgggattacaggtacacatcaccatgcctagctagttttttt--gtatttttagtagagacagggtttcaacattttggccaggctgatctcaaactcctgacctcaggtgatccacctgccttggcctcccaaagtgctgggattataggtgtgagccaccgtgccaggccagaagactcaatattattaagacagcagttctcaatattatcaagatagcagcagatcaagatagccaacttgatctacagattctacatagtaacacaatcttaatcaaaatcccaggaagttatttgtagagattgataaactggctctaaagtttatgtggagaggcaaaagatccaaaatagccaactcagtattgat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91347228 1084 + 91754291 ----taaatagacaaataaataaaagaatatctacaaaaaccaactgctaacatcatccttaatggtgagaaactagatgctttcccctaagatgaggaagaaggccaggatgtcccctcctacca---attttcaacatcatactggaggtcttggccaatgcaacaagacacaaaagggaaataaaaggtatacagaataaaaaggaagaaataaaactgtttttgttcacagatgacacaatcatctatgtaaaaaaatctaagagttgacaaaaggaaaaaaccccagaacaaagaagcaatttcagccaagtttcatgatgtaaggttagtgtcccagcgtcaatggctttcgtgtgtgccagcaaagaacaattggaatttagaattaaaaacaTTTGAGCAAGATAGGAAGCAAAAAAA-AGAAAAACTAATAAtaaaattaaatacacattaccatttacattagcatcccccaaaatgaaatactgaggtataaatgtaacaaaatatgtacaagatctatatgagaaaaactataaaactctgatgaaagatatcaaagaacttcataaatgggatgacattctatgtttatggacaggaagattcaaatttattttattttat--ttttgagacggagtctccctctgtcacccaggctggagtgcaatggcgccatctcagctcactgcaacctcagcctcccag--------------------------------gtagctgggattacaggtacacatcaccatgcctagctagttttttt--gtatttttagtagagacagggtttcaacattttggccaggctgatctcaaactcctgacctcaggtgatccacctgccttggcctcccaaagtgctgggattataggtgtgagccactgcgccaggccagaagactcagtattattaagatagcagttctcaatattatcaagatagcaacagatcaagatagccaacttgatctacagattgtacataataacacaatcttaatcaaaatcccaggaagttatttgtagagattgataaactggctctaaagtttatgtggagaggcaaaagatccaaaatagccaactcagtattgat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1413374 1084 + 1977891 ----taaataaataaataaataaaataatatctacaaaaaccaactgctaacatcatccttaacggtgagaaactagatgctttcccctaagatgaggaagaaggccaggatgtcccctcccacca---attttcaacatcatactggaggtcttggccaatgcaacaagacacaaaagggaaataaaaggtatacagaataaaaaggaagaaataaaactgtttttgttcacagatgacacaatcatctatgtaaaaaaatctaagagttgacaaaaggaaaaaaacccagaacaaagaagcaatttcagccaagtttcatgatataaggttagtgtcccagcatcaatggctttcatgtgtgccagcaaagaacaattggaatttagaattaaaaacatttgagcaagacaggaagcaaaaaaa-agaaaaactaataataaaattaaatacacattaccatttacgttagcatcccccaaaatgaaatactgaggtataaatgtaacaaaatatgtacaagatctatatgagaaaaactataaaactctgatgaaagatatcaaagaacttcataaatgggatgacattctatgtttatggacaggaagattcaaatttattttattttat--ttttgagacggagtctccctctgtcacccaggctggagtgcaatggcgccatctcagctcactgcaacctcagcctcccag--------------------------------gtagctgggattacaggtacacatcaccatgcctagctagttttttt--gtatttttagtagagacagggtttcaacattttggccaggctgatctcaaactcctgacctcaggtgatccacctgccttggcctcccaaagtgctgggattataggtgtgagccaccgcgccagtacagaagactcaacattattaagatagcagttctcaatattatcaagatagcagcagatcaagatagccaacttgatctacagattctacataataacacaatcttaatcaaaatcccaggaagttatttttagagattgataaactggctctaaagtttatgtagagaggcaaaagatccaaaatagccaactcagtattgat i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693883 1 - 6579706 I e macNem1.NW_012014355v1 19140726 460 - 19675229 I e saiBol1.JH378146 17273348 3058 - 17725628 I e calJac3.chr17 73826659 3482 + 74750902 I e cebCap1.NW_016107444v1 6362497 3308 + 6778120 I e canFam3.chr33 2315847 669 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I e colAng1.NW_012118932v1 7352003 3110 - 7796314 I e macFas5.chr2 192401277 449 - 192460366 I e rheMac8.chr2 2336113 461 - 204787373 I e nomLeu3.chr11 2838602 2287 - 123690457 I a score=20948.000000 s hg38.chr3_KI270934v1_alt 51753 12 + 163458 ggagaatggtca s panTro5.chr3 2523956 12 - 202621043 ggagaacgttca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114108 12 - 190779 ggagaacgttca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 64984 12 - 106623 ggataacggtca i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192401726 12 - 192460366 ggcgaacagttg i macFas5.chr2 I 449 C 0 s cerAty1.NW_012004056v1 16377983 12 - 16847902 ggagaacagtcg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91348312 12 + 91754291 ggagaacagtcg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1414458 12 + 1977891 ggagaacagtcg i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693883 1 - 6579706 I e macNem1.NW_012014355v1 19140726 460 - 19675229 I e saiBol1.JH378146 17273348 3058 - 17725628 I e calJac3.chr17 73826659 3482 + 74750902 I e cebCap1.NW_016107444v1 6362497 3308 + 6778120 I e canFam3.chr33 2315847 669 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I e colAng1.NW_012118932v1 7352003 3110 - 7796314 I e rheMac8.chr2 2336113 461 - 204787373 I e nomLeu3.chr11 2838602 2287 - 123690457 I a score=1756662.000000 s hg38.chr3_KI270934v1_alt 51765 468 + 163458 gaggactgataccacctgacttcaaggcttactctaaagctatagtcatgaaagcagcatgatactggcaaaagaatagacaaatagatcaatggaacagaatagagagcccagaatattaaaagtaatatttctaatagacctgtataaatgtgtcaactgatctttgacaaagcagcagaggccacacaatggagcagagatagtgttttcaataaatgacgctgggacaaccggacatccacaagcaaaaaaa-aaaaaaaaaaaa-----atctagacacagaccttatacctttcataaaaactcaaaatgaatcataaacctcaat------aaaatgcaaaactgtaagactcccagaagataatataggagaaaatctaaatgaccttgagtatggtgatgacattttagatacaatagcaagggcatgatccatgaaggaaataattgatgagctgaacttcattaacatt s panTro5.chr3 2523968 467 - 202621043 gaggactgataccacctgacttcaaggcttactctaaagctatagtcatgagagcagcatgatactggcaaaagaatagacaaatagatcaatggaacagaatagagagcccagaatattaaaagtaatatttctaatagacctgtataaatgtgtcaactgatctttgacaaggcagcagaggccacacaatggagcagagatagtgttttcaataaatgacgctgggacaaccggacatccacaagcaaaaaaa-aaaaaaaaaaaa------tctagacacagaccttatacctttcataaaaactcaaaatgaatcataaacctcaat------aaaatgcaaaactgtaagactcccagaagataatataggagaaaatctaaatgaccttgagtatggtgatgacgttttagatacaatagcaagggcatgatccatgaaggaaataattgatgagctgaacttcattaacatt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114120 465 - 190779 gaggactgataccacctgacttcaaggcttactctaaagctatagtcatgagagcagcatgatactggcaaaagaatagacaaatagatcaatggaacagaatagagagcccagaatattaaaagtaatatttctaatagacctgtataaatgtgtcaactgatctttgacaaggcagcagaggccacacaatggagcagagatagtgttttcaataaatgacgctgggacaaccggacatccacaagcaaaaaaa-aaaaaaaaata--------ctagacacagaccttatacctttcataaaaactcaaaatgaatcataaacctcaat------aaaatgcaaaactgtaagactcccagaagataatataggagaaaatctaaatgaccttgagtatggtgatgacgttttagatacaatagcaagggcatgatccatgaaggaaataattgatgagctgaacttcattaacatt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 64996 473 - 106623 gaggactgataccacctgacttcaaggcttactctaaagctatagtcatgagagcagcatgatactggcaaaagaatagacaaatagatcaatggaacagaatagagagcccagaatattaaaagtaatatttctaatagacctgtataaatgtgtcaactgatctttgacaaagcagcagaggccacacaatggagcagagatagtgttttcaataaatgacgctgggacaaccggacatccacaagcaaaaaaa-aaaaaaaaaaaaaaaaaatctagacacagaccttatacctttcataaaaactcaaaatgaatcataaacctcaat------aaaatgcaaaactgtaagactcccagaagataacataggagaaaatctaaatgaccttgagtatggtgatgacgttttagatacaatagcaagggcatgatccatgaaggaaataattgatcagctgaacttcattaacatt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2336574 474 - 204787373 gaggactgatatcacctgacttcaaggcttactctaaagctatagtcatgaaaaccgcatgatactggcaaaagaatagacaaatagatcaatgggacagaatagagagcccagaatattaaaagtaatatttctaatcgacctgtataaatgtgtcaactgatctttgacaaaggagcagaggctatgcaatggagcagagatagtgtttacaacaaacgatactgggacaactggacattcacatgcaaaaaa--ataaatatattt---atatagagacacagaccttatacctttcataaaaactcagaatgaatcataaacctcaataaaatgaaaatgaaaaactgaaagac-ccaacaagataacataggagaaaatctaaatgaccttggggatggtgatgactttttagatacaataccaagggcatgatccatgaaggaaataattgatgagctgaacttcattaacatt i rheMac8.chr2 I 461 C 0 s macFas5.chr2 192401738 475 - 192460366 gaggactgatatcacctgacttcaaggcttactctaaagctatagtcatgaaaaccgcatgatactggcaaaagaatagacaaatagatcaatgggacagaatagagagcccagaatattaaaagtaatatttctaatcgacctgtataaatgtgtcaactgatctttgacaaaggagcagaggctatgcaatggagcagagatagtgtttacaacaaacgatactgggacaactggacattcacatgcaaaaaaa-ataaatatattt---atatatagacacagaccttatacctttcataaaaactcagaatgaatcataaacctcaataaaatgaaaatgaaaaactgaaagac-ccaagaagataacataggagaaaatctaaatgaccttggggatggtgatgactttttagatacaataccaagggcatgatccatgaaggaaataattgatgagctgaacttcattaacatt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19141186 476 - 19675229 gaggactgatatcacctgacttcaaggcttactctaaagctatagtcatgaaaaccgcatgatactggcaaaagaatagacaaatagatcaatgggacagaatagagagcccagaatattaaaagtaatatttctaatcgacctgtataaatgtgtcaactgatctttgacaaaggagcagaggctatgcaatggagcagagatagtgttttcaacaaacgatactgggacaactggacattcacatgcaaaaaaatataaatatattt---atatatagacacagaccttatacctttcataaaaactcagaatgaatcataaacctcaataaaatgaaaatgaaaaactgaaagac-ccaagaagataacataggagaaaatctaaatgaccttggggatggtgatgactttttagatacaataccaagggcatgatccatgaaggaaataattgatgagctgaacttcattaacatt i macNem1.NW_012014355v1 I 460 C 0 s cerAty1.NW_012004056v1 16377995 474 - 16847902 gaggactgatatcacctgacttcaaggcttactctaaagctatagtcatgaaaactgcatgatactggcaaaagaatagacaaatagatcgatggaacagaatagagagcccagaatattaaaagtaatatttctaatagacctgtataaatgtgtcaactgatctttgacaaaggagcagaggctatgcaatggagcagagatagtgttttcaacaaacgatactgggacaactggacattcacacgcaaaataa-ataaatatattt---atatatagacacagactttatacctttcataaaaactcagaatgaatcataaacctcaat-aaatgaaaatgaaaaactgaaagac-ccaagaagataacataggagaaaatctaaatgaccttggggatggtgatgactttttagatacgataccaagggcatgatccatgaaggaaataattgatgagctgaacttcattaacatt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91348324 473 + 91754291 gaggactgatatcacctgacttcaaggcttactctaaagctatagtcatgaaaactgcatgatactggcaaaagaatagacaaatagatcaatggaacagaacagagagcccagaatattaaaagtaatatttctaatcggcctgtatacatgtgtcaactgatctttgacaaaggagcagaggccatgccatggagcagagatagtgttttcaacaaacgatactgggacaactggacattcacacgcaaa--aa-ataaatatattt---atatatagacacagaccttatacctttcataaaaactcagaatgaatcataaacctcaataaaatgaaaatgaaaaactgaaagac-ccaagaagataacataggagaaaatctaaatgacctgggagatggtgatgactttttagatacgataccaagggcatgatccatgcaggaaataattgatgagctgaacttcattaacatt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1414470 475 + 1977891 gaggactgatatcacctgacttcaaggcttactctaaagctatagtcatgaaaactgcatgatactggcaaaagaatagacaaatagatcgatggaacagaatagagagcccagaatattaaaagtaatatttctaatagacctgcataaatgtgtcaactgatctttgacaaaggagcagaggctatgcaatggagcagagatagtgttttcaacaaacgacactgggacaactggacattcacacgcaaaagaa-ataaatatattt---atatatagacacagactttacacctttcataaaaactcagaatgaatcataaacctcaataaaatgaaaatgaaaaactgaaagac-ccaagaagataacataggagaaaatctaaatgaccttggagatggtgatgactttttagatacgataccaagggcatgatccatgaaggaaataattgatgagctgaacttcgttaacatt i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693883 1 - 6579706 I e saiBol1.JH378146 17273348 3058 - 17725628 I e calJac3.chr17 73826659 3482 + 74750902 I e cebCap1.NW_016107444v1 6362497 3308 + 6778120 I e canFam3.chr33 2315847 669 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I e colAng1.NW_012118932v1 7352003 3110 - 7796314 I e nomLeu3.chr11 2838602 2287 - 123690457 I a score=1165611.000000 s hg38.chr3_KI270934v1_alt 52233 246 + 163458 aaaaacttcttctctgtgaaaggcaatggcaagagaatgaaaatatttgcaaaagtcccatctgattaaagacttttatct-aaaatatacaaagagccgggtgcactggctcagacctgaaatcccagcactttgggaggctgaggtaagcggatcaattgaggtcaggcgttggagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcg s panTro5.chr3 2524435 246 - 202621043 aaaaacttcttctctgtgaaaggcaatggcaagagaatgaaaatatttgcaaaagtcccatctgattacagacttttatct-aaaatatacaaagagccgggtgcactggctcagacctgaaatcccagcactttgggaggctgaggtaagtggatcaattgaggtcaggtgttggagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccaggtgtggcagcg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114585 246 - 190779 aaaaacttcttctctgtgaaaggcaatggcaagagaatgaaaatatttgcaaaagtcccatctgattacagacttttatct-aaaatatacaaagagccgggtgcactggctcagacctgaaatcccagcactttgggaggctgaggtaagtggatcaattgaggtcaggtgttggagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccaggtgtggcagcg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 65469 243 - 106623 aaaaa---cttctctgtgaaaggcaatggcaagagaatgaaaatatttgcaaaagtcccatctgattaaagacttttatct-aaaatatacaaagagccgggtgcactggctcagacctgaaatcccagcactttgggaggctgaggtaggcggatcacttgaggtcaggcattggagtccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2840889 246 - 123690457 aaaaacttcttctctgtgaaaggcaatggcaagaaaatgaaaatatttgcaaaagtctcatctgattaaagactgttatct-aaaatatacaaagagccaggtgcactggctcagacctgaaatctcagcactttgggaggctgaggtaggcggatcacttgaggtcaggcatttgagaccagcctggccaacatgttgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcg i nomLeu3.chr11 I 2287 C 0 s rheMac8.chr2 2337048 247 - 204787373 aaaaacttcctctctgtgaaagacaatggcaagagaatgaaaatatttgcaaaagtcccatctgattaaagactgttatctaaaaatacacaaagagccaggtgcactggctcacacctgaaatcccagcactttgggaggctgaggtaggcggatcacttgaggtcaggcatttgagaacagcctggccaacatggggaaaccctgtctctattaaaaatacaaaaattagctgggtgtggtggtg i rheMac8.chr2 C 0 I 7 s macFas5.chr2 192402213 247 - 192460366 aaaaacttcctctctgtgaaagacaatggcaagagaatgaaaatatttgcaaaagtcccatctgattaaagactgttatctaaaaatacacaaagagccaggtgcactggctcacacctgaaatcccagcactttgggaggctgaggtaggcggatcacttgaggtcaggcatttgagaacagcctggccaacatggggaaaccctgtctctattaaaaatacaaaaattagctgggtgtggtggtg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19141662 247 - 19675229 aaaaacttcctctctgtgaaagacaatggcaagagaatgaaaatatttgcagaagtcccatctgattaaagactgttatctaaaaatacacaaagagccaggtgcactggctcacacctgaaatcccagcactttgggaggctgaggtaggcggatcacttgaggtcaggcatttgagaacagcctggccaacatggggaaaccctgtctctattaaaaatacaaaaattagctgggtgtggtggtg i macNem1.NW_012014355v1 C 0 I 7 s cerAty1.NW_012004056v1 16378469 247 - 16847902 aaaaactacctctccgtgaaagacaatggcaagagaatgaaaatatttgcaaaagtcccatctgattaaagactgttatctaaaaatacacaaagagccaggtgcactggctcagacctgaaatcccagcactttgggaggctgaggtaggcggatcacttgaggtcaggcgtttgagaacagcctggtcaacatggggaaaccctgtctctattaaaaacacaaaaattagctgggtgtggtggtg i cerAty1.NW_012004056v1 C 0 I 7 s chlSab2.chr15 91348797 247 + 91754291 aaaaacttcctctctgtgaaagacaatggcaagagaatgaaaatatttgcaaaagtcccatctgattaaagactgttatctaaaaatacacaaagagccaggtgcactggctcagacctgaaatcccagcactttgggaggctgaggtaggcggatcacttgaggtcaggcgtttgagaacagcctggccaacatggggaaaccctgtctctattaaaaatacaaaaattagctgggtgtggtggtg i chlSab2.chr15 C 0 I 7 s manLeu1.NW_012102020v1 1414945 247 + 1977891 aaaaactacctctctgtgaaagacaatggcaagagaatgaaaatatttgcaaaagtcccatctgattaaagactgttatctaaaaatacacaaagagccaggtgcactggctcagacctgaaatcccagcactttgggaggctgaggtaggcggatcacttgaggtcaggcgtttgagaacagcctggtcaacatggggaaaccctgtctctattaaaaacacaaaaattagctgggtgtggtggtg i manLeu1.NW_012102020v1 C 0 I 7 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693883 1 - 6579706 I e saiBol1.JH378146 17273348 3058 - 17725628 I e calJac3.chr17 73826659 3482 + 74750902 I e cebCap1.NW_016107444v1 6362497 3308 + 6778120 I e canFam3.chr33 2315847 669 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I e colAng1.NW_012118932v1 7352003 3110 - 7796314 I a score=701.000000 s hg38.chr3_KI270934v1_alt 52479 25 + 163458 ggcgccattactactaccagtagta s panTro5.chr3 2524681 7 - 202621043 ggcacct------------------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114831 7 - 190779 ggcacct------------------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 65712 7 - 106623 ggcgcct------------------ i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2841135 7 - 123690457 gacgcct------------------ i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192402460 7 - 192460366 catgcct------------------ i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693883 1 - 6579706 I e macNem1.NW_012014355v1 19141909 7 - 19675229 I e saiBol1.JH378146 17273348 3058 - 17725628 I e calJac3.chr17 73826659 3482 + 74750902 I e cebCap1.NW_016107444v1 6362497 3308 + 6778120 I e canFam3.chr33 2315847 669 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I e colAng1.NW_012118932v1 7352003 3110 - 7796314 I e manLeu1.NW_012102020v1 1415192 7 + 1977891 I e chlSab2.chr15 91349044 7 + 91754291 I e cerAty1.NW_012004056v1 16378716 7 - 16847902 I e rheMac8.chr2 2337295 7 - 204787373 I a score=1417156.000000 s hg38.chr3_KI270934v1_alt 52504 324 + 163458 gtaatcccagctactcgggaggctgaggcaggataatcacttgaacccaggaggcggagattgcagtgaactgagatcgcgccactgcactccagcctgggcaacagagtgagactctgtctcaaaaaat---attaattaattaattaaatatacaaataactcttacaactcaacaataagaaaatgaacaacccagttttttaaatgggtaaaaaaa-ctgaacatacat---atcaccaaagaagacattcacatggcacataagcatctacaaagatgttcaacatcgtatgtcattagggaaccgcaaacaacgcgaaacccatg s panTro5.chr3 2524688 325 - 202621043 gtaaccccagctactcgggaggctgaggcaggagaatcacttgaacccaggaggcggagattgcagtgaactgagatcgcgccactgcactccagcctgggcaacagagtgagactctgtctcaaaaaat---attaattaattaattaaatatacaaataactcttacaactcaacaataagaaaatgaacaacccagttttttaaatgggtaaaaaaaactgaacatacct---atcaccaaagaagatattcacacggcacataagcatctacaaagatgttcaacatcgtatgtcattagggaaccgcaaacaacgcgaaaccaatg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114838 324 - 190779 gtaaccccagctactcgggaggccgaggcaggagaatcacttgaacccaggaggcggagattgcagtgaactgagatcgcgccactgcactccagcctgggcaacagagtgagactctgtctcaaaaaat---attaattaattaattaaatatacaaataactcttacaactcaacaataagaaaatgaacaacccagttttttaaatgggtaaaaaaa-ctgaacatacct---atcaccaaagaagatattcacacggcacataagcatctacaaagatgttcaacatcgtatgtcattagggaaccgcaaacaacgcgaaaccaatg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 65719 325 - 106623 gtaatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgaactgagatcgcgccactgcactccagcctgggcaacacagtgagactctgtctcaaaaaat---attaattaattaattaaatatacaaataactcttacaactcaacaataagaaaatgaacaacccagttttttaaatgggtaaaaaaaactgaacatacat---atcaccaaagaagatattcacatggcacaaaagcatctacaaagatgttcaacatcgtatgtcattagggaaccgcaaacaacgcgaaaccaata i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2841142 318 - 123690457 gtaatcccagctactcaggaggctgaggcaggataatcacttgaatccgggaggtggaggttgcagtgagctgagatcacatcactgcatgccagcctgggcaacagagtgagagtctgtctcaaaaaataacattaattaattaacgaaatatacaaataactcttacaactcaacaataagaaaatgaataacccagttttt------------aaaa-ctgaacatacatatcatcaccaaagaagatattcacatggcacataagcatctacaaagatattcaacatcgtatgtcattagggaactgcaaacaacgtgaaaccaata i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2337302 320 - 204787373 gtaatcccagctactcggaaggccgaggcaggagaatcgcttgaacccgggaggcggagattgcagtgaactgagattgcaccactgcacgtcagcctaggcaaaagagtgagattctgtctcaaaaaataataatatttaattaattaaatatacaaataactcttacaactcaacaataagaaaatgaacaacccaattttttaaatgggtaaaaaaa-ctgaacatacat---atcaccaaagaaggtattcacatggcacataagcatctaaaaagacgttcaacatc--atgtccttagggaactgcaaacatcgcacaac----- i rheMac8.chr2 I 7 C 0 s macFas5.chr2 192402467 320 - 192460366 gtaatcccagctactcggaaggccgaggcaggagaatcgcttgaacccgggaggcggagattgcagtgaactgagattgcaccactgcacgtcagcctaggcaaaagagtgagattctgtctcaaaaaataataatatttaattaattaaatatacaaataactcttacaactcaacaataagaaaatgaacaacccaattttttaaatgggtaaaaaaa-ctgaacatacat---atcaccaaagaaggtattcatatggcacataagcatctaaaaagacgttcaacatc--atgtccttagggaactgcaaacatcgcacaac----- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19141916 320 - 19675229 gtaatcccagctacttggaaggccgaggcaggagaatcgcttgaacccgggaggcggagattgcagtgaactgagattgcaccactgcacgtcagcctaggcaaaagagtgagattctgtctcaaaaaataataatatttaattaattaaatatacaaataactcttacaactcaacaataagaaaatgaacaacccaattttttaaatgggtaaaaaaa-ctgaacatacat---atcaccaaagaaggtattcacatggcacataagcatctaaaaagacgttcaacatc--atgtccttagggaactgcaaacatcgcacaac----- i macNem1.NW_012014355v1 I 7 C 0 s cerAty1.NW_012004056v1 16378723 320 - 16847902 gtaatcccagctactcagaaggctgaggcaggagaatcgcttgaatccgggaggcagagattgcagtgaactgagattgcacccctgcacgtcagcctaggcaaaagagtgagattctgtctcaaaaaataataatatttaattaattaaatatacaaataactcttacaactcaacaataagaaaatgaacaacccaattttttaaatgggtaaaaaaa-ctgaacatacat---atcaccaaagaaggtattcacatggcacataagcatctaaaaagacgttcaacatc--atgtcattagggaactgcaaacatcgcacaac----- i cerAty1.NW_012004056v1 I 7 C 0 s chlSab2.chr15 91349051 315 + 91754291 gtaatcccagctactcagaaggccgaggcaggagaatcgcttgaacctgggaggcggagattgcagtgaactgagattgcaccactgcacgtcagcctaggcaaaagagtgagattctgtctcaaaaaataataatatttaattaattaaatatacaaataactcttacaactcaacaataagaaaatgaacaacccaattttttaaatgggtaaaaaac-ctgaacatacat---atcaccaaagaaggtattcacatggcacataagcatctaaaaagacgttcaaca-------tcattagggaactgcaaacatcgcacaac----- i chlSab2.chr15 I 7 C 0 s manLeu1.NW_012102020v1 1415199 320 + 1977891 gtaatcccagctactcagaaggctgaggcaggagaatcgcttgaatccgggaggcggagattgcagtgaactgagattgcacccctgcacgtcagcctaggcaaaagagtgagattctgtctcaaaaaataataatatttagttaattaaatatacaaataactcttacaactcaacaataagaaaatgaacaacccaattttttaaatgggtaaaaaaa-ctgaacatacat---atcaccaaagaaggtattcacatggcacataagcatctaaaaagacgttcaacatc--atgtcattagggaactgcaaacatcgcacaac----- i manLeu1.NW_012102020v1 I 7 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693883 1 - 6579706 I e saiBol1.JH378146 17273348 3058 - 17725628 I e calJac3.chr17 73826659 3482 + 74750902 I e cebCap1.NW_016107444v1 6362497 3308 + 6778120 I e canFam3.chr33 2315847 669 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I e colAng1.NW_012118932v1 7352003 3110 - 7796314 I a score=3320910.000000 s hg38.chr3_KI270934v1_alt 52828 660 + 163458 cacacccgttagaatgaccacaatcGCCAGGCATCGTGGCTCACAACT----------------------------------------------------------GTACTcaatacacacctgttagaatgaccacagtcaccaggcactgtggctcacacctgtactcccagcactttgggaggctgaagcaggaggatcactggagcccaggagtttgagaccagcctgggcaacaaagcaagatcccatctctacaaaaaattaaaaaattatatgggcacggtagcatgtgactgtggtcccagctactctggaggctgagatggcaggattgcttgagcccaggaggttgaggctgcagtgagccgcgatccagccttcactccagcctgagcaatggagtgagaccccgtctc------------aaaagaaaaagaaaaaaagaatgatcaaaatccacagcactgaaaacttcaaatgctgttcaggatgtggagc-aacaggaaccctccttcattgctggtgggaaggcaacatggtacaaccactttggaagacaatttggcagtttcttttttttttttttttttggagatggagtct--ggctctgtcgcccaggctggagtgcagtggcacgatctcggctcactgcaagctccgcctcccgggttcacgcgattctcctgcctcagcctcctcagcagctgggaccacaggcgcccg s panTro5.chr3 2525013 653 - 202621043 cacacccgttagaatgaccacaatcgccaggcatcgtggctcacaact----------------------------------------------------------gtactcaatacacacctgttagaatgaccacagtcgccaggcactgtggctcacacctgtactcccagcactttgggaggctgaagcgggaggatcactggagcccaggagtttgagaccagcctgggcaacaaagcaagatcccatctctacaaaaaattaaaaaattatatgggcacggtagcatgtgactgtggtcccagctactctggaggctgagatggcaggattgcttgagcccaggaggttgaggctgcagtgagccgtgatccagccttcactccagcctgagcaacggagtgagaccctgtctc------------aaaagaaaaagaaaaaaagaatgatcaaaatccacagcactgaaaacttcaaatgctgttcaggatgtggagc-aacaggaaccctcc---attgccagtgggaaggcaacatggtacaaccactttggaagacaatttggcagtttctttttttttttttt----ggagatggagtct--ggctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccacctcccaggttcacgcgattctcctgcctcagcctcctcagtagctgggaccacaggcacccg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115162 648 - 190779 cacacccgttagaatgaccacaatcgccaggcttcgtggctcacaact----------------------------------------------------------gtactcaatacacacctgttagaatgaccacagtcgccaggcactgtggctcacacctgtactcccagcactttgggaggctgaagcgggaggatcactggagcccaggagtttgagaccagcctgggcaacaaagcaagatcccatctctacaaaaaattaaaaaattatatgggcacggtagcatgtgactgtggtcccagctactctggaggctgagatggcaggattgcttgagcccaggaggttgaggctgcagtgagccgtgatccagccttcactccagcctgagcaacggagtgagaccctgtctc------------aaaagaaaa--gaaaaaagaatgatcaaaatccacagcactgaaaacttcaaatgctgttcaggatgtggagc-aacaggaaccctcc---attgccagtgggaaggcaacatggtacaaccactttggaagacaatttggcagttctttttttttttt-------ggagatggagtct--ggctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccacctcccaggttcacgcgattctcctgcctcagcctcctcagtagctgggaccacaggcacccg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66044 712 - 106623 cacacccgttagaatgaccacaatcgccaggcaccgTGGCTTACACCTGGACTCAATACACACCTGTTAGAATGACCACAATCGCCAGGCACCGTGGCTTACACCCGTACTcaatacacacctgttagaatgaccacagtcgtcaggcactgtggctcacacctgtactcccagcactttgggaggctgaagcgggaggatcactggagcccaggagtttgagaccagcctgggcaacaaagcaagatcccatctctacaaaaaattaaaaaattatatgggcacggtagcatgtgactgtggtcccagctaatctggaggctgagatggcaggactgcttgagcccaggaggttgaggctgcagtgagccgtgatccagccttcactccagcctgagcaacggagtgagaccccgtctc------------aaaagaaaaagaaaaagagaatgatcaaaatccacagcactgaaaacttcaaatgctgttcaggatgtggagc-aacaggaaccctccttcattgccggtgggaaggcaacatggtacaaccactttggaagacaatttggcagtttctttttttttttt------ggagatggagtct--ggctctgtcacccaggctggagtgcagtggcacgatctcggctcactgcaagctccgcctcccgggttcacgcgattctcctgcctcagcctcctcagtagctgggaccacaggcgcccg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2841460 660 - 123690457 cacacctgttacaatgaccacaatcgccaggcaccgtagctcacagct----------------------------------------------------------gtgctcaatacacacccgttacaatgaccacaatcgccaggcactgtggctcacacctgtgctcccagcactttgggaggctgaagcaggcggatcactggagcccaggagtttgagaccagcctgggcaacaaagcaagatcccatctctacaaaaaatttaaaaattgtatgggcacggtggcacgtgactgtggtcccagctactctggaggctgaggtgagaggatggcttgagcccagg-ggttgaggctgcagtgaaccatgatccagcctgcactccagcctgagcaacagagtgagaccctgtctc------------aaaagaaaaagaaaaaaagaatgatccaaatccacagcactgaaaacttcaaacgctgtccgggatgtggagcaaacaggaaccctccttcattgctggtgggaaggcagcatggtacaaccactctggaagacaatttggcagtttgtttttttctttttttt--ggagatggagtctccgcttttgtcgcccaggctggagtgtagtggcacaatcttggctcactgcaagctccgcctctcaagttcacacgattctcctgcctcagcctcctgagtagctgggaccacaggtgcccg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2337622 610 - 204787373 ---------------------------------------------------------------------------------------------------------------caatacacacctgttagaatgaccacaattgccaggcattgtggctcacacctgtactcccagcactttgggagactgaagcaggaggatgacttgagcccaggagtttgagaccagtctgggcaacaaagcaagatcccatctctacaaaatattaaaaaattatatgagcatggtagcaggtgactgtggtcccagctactctggaggctgaggtgggaggattgcttgagcccaggaggttgaggctgcagtgaggcatgatccagcctgtaccccagcctgagcaacacagtgagaccctgtctc------aaaagaaaaagaaaaagaaaaaaagaatgaccaaaatccacagcattgaaaacttcaaatgctgttcaggatgtggagc-aacaagaactctccttcattactggtgggaaggcaacatggtacaaccactttggaagacaattcggtagtttatttttttatttttct---tgagacggagttt--caccctgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaagctctgcctcctgggttcacgcgattctcctgcctcagtctcccgagtagctggaactacaggtgcccg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192402787 610 - 192460366 ---------------------------------------------------------------------------------------------------------------caatacacacctgttagaatgaccacaattgccaggcattgtggctcacacctgtactcccagcactttgggagactgaagcaggaggatgacttgagcccaggagtttgagaccagtctgggcaacaaagcaagatcccatctctacaaaatattaaaaaattatatgagcatggtagcaggtgactgtggtcccagctactctggaggctgaggtgggaggattgcttgagcccaggaggttgaggctgcagtgaggcatgatccagcctgtaccccagcctgagcaacacagtgagaccctgtctc------aaaagaaaaagaaaaagaaaaaaagaatgaccaaaatccacagcattgaaaacttcaaatgctgttcaggatgtggagc-aacaagaaccctccttcattactggtgggaaggcaacatggtacaaccactttggaagacaattcggtagtttatttttttatttttct---tgagacggagttt--caccctgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaagctctgcctcctgggttcacgcgattctcctgcctcagtctcccgagtagctggaactacaggtgcccg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19142236 610 - 19675229 ---------------------------------------------------------------------------------------------------------------caatacacccctgttagaatgaccacaattgccaggcattgtggctcacacctgtactcccagcactttgggagactgaagcaggaggatgacttgagcccaggagtttgagaccagtctgggcaacaaagcaagatcccatctctacaaaatattaaaaaattatatgagcatggtagcaggtgactgtggtcccagctactctggaggctgaggtgggaggattgcttgagcccaggaggttgaggctgcagtgaggcatgatccagcctgtaccccagcctgagcaacacagtgagaccctgtctc------aaaagaaaaagaaaaagaaaaaaagaatgaccaaaatccacagcactgaaaacttcaaatgctgttcaggatgtggagc-aacaagaaccctccttcattactggtgggaaggcaacatggtacaaccactttggaagacaattcggtagtttatttttttatttttct---tgagacggagttt--caccctgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaagctctgcctcctgggttcacgcgattctcctgcctcagtctcccgagtagctggaactacaggtgcccg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16379043 610 - 16847902 ---------------------------------------------------------------------------------------------------------------taatacacacctgttagaatgaccacaattgccaggcattgtggctcacacctgtactcccagcactttgggagactgaagcaggaggatgacttgagcccaggagtttgagaccagtctgggcaacaaagcaagatcccatctctacaaaatattaaaaaattatatgagcatggtagcaggtgactgtggtcccagctactccggaggctgaggtgggaggattgcttgagcccaggaggttgaggctgcagtgaggcatgatccagcctgtaccccagcctgagcaacacagtgagaccctgtctc------aaaagaaaaagaaaaagaaaaaaagaatgaccaaaatccacagcactgaaaacttcaaatgctgttcaggatgtggagc-aacaggaaccctccttcattactggtgggaaggcaacatggtacaaccactttggaagacaattcggtagtttatttttttatttttct---tgagacggagttt--cactctgtcccccaggctggagtgcagtggcgtgatctcggctcactgcaagctcggcctcctgggttcacgcgattctcctgcctcagtctcccgagtagctggaactacaggtgcccg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91349366 616 + 91754291 ---------------------------------------------------------------------------------------------------------------caatacacacctgttagaatgaccgcaattgccaggcattgtggctcacacctgtactcccagcactttgggagactgaagcaggaggatgacttgagcccaggagtttgagaccagtctgggcaacaaagcaagatcccatctctacaaaatattaaaaaattatatgagcatggtagcaggtgactgtggtcccagctactccggaggctgaggtgggaggattgcttgagcccaggaggttgaggctgcagtgaggcatgatccagcctataccccagcctgagcaacacagtgagaccctgtctcaaaagaaaaagaaaaagaaaaagaaaaaAAGAAtgaccaaaatccacagcactgaaaacttcaaatgctgttcaggatgtggagc-aacaggaaccctccttcattactggtgggaaggcaacatggtacaaccactttggaagacaattcggtagtttatttttttatttttct---tgagacggagttt--cactctgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaagctctggctcctgggttcacgcgattctcctgcctcagtctcccgagtagctggaactacaggtgccca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1415519 616 + 1977891 ---------------------------------------------------------------------------------------------------------------caacacacacctgttagaatgaccacaattgccaggcattgtggctcacacctgtactcccagcactttgggagactgaagcaggaggatgacttgagtccaggagtttgagaccagtctgggcaacaaagcaagatcccatctctacaaaatattaaaaaattatatgagcatggtagcaggtgactgtggtcccagctactccggaggctgaggtgggaggattgcttgagcccaggaggttgaggctgcagtgaggcatgatccagcctgtaccccagcctgagcaacacagtgagaccctgtctcaaaagaaaaagaaaaagaaaaagaaaaaAAGAAtgaccaaaatccacagcactgaaaacttcaaatgctgttcaggatgtggagc-aacaggaaccctccttcattactggtgggaaggcaacatggtacaaccactttgaaagacaattcggtagtttatttttttatttttct---tgagacggagttt--cactctgtcccccaggctggagtgcagtggcgtgatctcggctcactgcaagctctgcctcctgggttcacgcgattctcctgcctcagtctcccgagtagctggaactacaggtgcccg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7355113 651 - 7796314 CACACCTGTTAGAATGACCACAATCACCAGACACAGTGGCTCACACAT----------------------------------------------------------GTACTcagtacacacctattagaatgactacaattgccaggcattgtggctcacacctctactcccagcactttgggagactgaagcaggaggatgacttgaacccaggagtttgagaccagtctgggcaacaaagcaagatcccatctctacaaaatattaaaaaattatatgagcgtggtagcaggtgactgtggtcccagctactctggaggctgaggtgggaggattgcttgagcccaggaggttgaggctgcagtgaggcgtgat------------ccagtctgagaaacacagtgagaccctgtggc------aaaagaaaaagaaaaagaaaaaaagaatgaccaaaatccacagcactgaaaacttcaaatgctgttcaggatgtggagc-aacaggaaccctccttcattactggtgggaaggcaacatggtacaaccactttggaagacaattcggtagtctctttttttatttttct---tgagacagagttt--cactctgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaagctctgcctcctgggttcacgcaattcttctgcctcagtctcccaagtagctgggactacaggtgcccg i colAng1.NW_012118932v1 I 3110 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693883 1 - 6579706 I e saiBol1.JH378146 17273348 3058 - 17725628 I e calJac3.chr17 73826659 3482 + 74750902 I e cebCap1.NW_016107444v1 6362497 3308 + 6778120 I e canFam3.chr33 2315847 669 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I a score=47840.000000 s hg38.chr3_KI270934v1_alt 53488 6 + 163458 caattt s panTro5.chr3 2525666 6 - 202621043 caattt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115810 6 - 190779 caattt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66756 6 - 106623 caattt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2842120 6 - 123690457 caattt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2338232 6 - 204787373 caattt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192403397 6 - 192460366 caattt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19142846 6 - 19675229 caattt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16379653 6 - 16847902 caattt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91349982 6 + 91754291 caattt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1416135 6 + 1977891 caattt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7355764 6 - 7796314 caattt i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17276406 6 - 17725628 caagtt i saiBol1.JH378146 I 3058 C 0 s cebCap1.NW_016107444v1 6365805 6 + 6778120 caattt i cebCap1.NW_016107444v1 I 3308 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693883 1 - 6579706 I e calJac3.chr17 73826659 3482 + 74750902 I e canFam3.chr33 2315847 669 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I a score=8855776.000000 s hg38.chr3_KI270934v1_alt 53494 1109 + 163458 ggcactttcttac-caaactaaaccatactcttactatgcagtccagcaatcacactccttgatatttacccaaagggacagaaaacgtttttgtccacacgaaaacctgcacatggaggtttatagcagctttattcataatttatagcagcttta--ttcataattgccaaaacttggaagcaaccaagatgtccttcagcaggtgaacgggtaaataacctatggtgcattcagacgatggaatattattcagtgctaaaatgaaatgaattacacagccatgaaaatacatacagaaaacttaaatgcata-tactatgtgaaagaagacaatctgaaaaggctatttaccttacggttgcaattatatgacattctggaaaaggtaaaactatggagacagtgaaaagatcagtggttgccaggggttggggatgaataagtgaagc-------acagaggatttttagggcactgaaactacttatttttctgtatgatgctacaatggcagaaacatttatgtta----------tttt-----ttgagattgagtctcactctgtcgcccagaatggagtgcagtggtgcgatctctgctcactgcaacctccacctcccgggttcaagcgattctcctgcctcagc--------------------cttccatgtagctaagactacaggcatgcgccaccacacccggctaatttttgtatttttagtagagatgggttttcgccgtgttggccaggctggtctcgaactcctga-tctcaaagagatccacccgcctccacctcccaaagtgctgagattacaggcatgagccactgcgccgggccagccgatacgttgttgaatagagaatggagaatatccaacgccaaaaatgtgctgtcaactctggactt----tgatgaggatatgttgacgtggacgcatcgactgtcacac--gtg-ccacct-ggtgcagggcgttggtggtgggggaggctgggcgtaggtatatgtgtgtgtggcagggggcatatgggaactttctgtattttccactcaggaaaattttgctgtaaacccaaaactgctct---aaaaagcaaattttattatttaaaaGATGATTTT-AAAATTAATATATTTAAATTTTTAA s panTro5.chr3 2525672 1113 - 202621043 ggcactttcttac-caaactaaaccatactcttactatgcagtccagcaatcacactccttgatatttacccaaagggacagaaaacgtttttgtccacacgaaaacctgcacatggaggtttgtagcagctttattcataatttatagcagcttca--ttcataattgccaaaacttggaagcaaccaagatgtccttcagcaggtgaacgggtaaataacctatggtgcattcagacaatggaatattattcagtgctaaaatgaaatgaactacacagccatgaaaatacatacagaaaacttaaatgcata-tactatgtgaaagaagacaatctgaaaaggctatttagcttacggttgcaattatatgacattctggaaaaggtaaaactacggagacagtgaaaagatcagtggttgccaggggttggggatgaataagtgaagc-------acagaggatttttagggcactgaaactacttatttttctgtatgatgctacaatggcagaaacatttatgtta----------ttttattttttgagattgagtctcactctgtcacccagaatggagtgcagtggtgtgatctcgactcactgcaacctctgcctcccaggctcaagcgattctcctgcctcagc--------------------cttccaagtagctaagactacaggcatgcgccaccacacccggctaatttttgtatttttagtagagatgggttttcgc-gtgttggccaggctggtctagaactcctga-tctcaa-gagatccacccgcctccacctcccaaagtgctgagattacaggcatgagccactgtgcctggccagccgatacattgttgaatagagaatggagaatatccaacgccagaaatgtgctgtcaactctggactt----tgatgaggatatgttgacgtggacgcctcgactgtcacac--gtg-ccacct-ggtgcagggcgctggtggtgggggaggctgggcgtaggtatatgtgtgtgtggcagggggcatatgggaactttctgtattttccactcaggacaattttgctgtaaacgcaaaactgctct---aaaaagcaaattttattatttaaaaGATGATTTTTAAAATTAATATATTTAAATTTTTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115816 1112 - 190779 ggcactttcttac-caaactaaaccatactcttactatgcagtccagcaatcacactccttgatatttacccaaagggacagaaaacgtttttgtccacacgaaaacctgcacatggaggtttgtagcagctttattcataatttatagcagcttca--ttcataattgccaaaacttggaagcaaccaagatgtccttcagcaggtgaacgggtaaataacctatggtgcattcagacaatggaatattattcagtgctaaaatgaaatgaactacacagccatgaaaatacatacagaaaacttaaatgcata-tactatgtgaaagaagacaatctgaaaaggctatttagcttacggttgcaattatatgacattctggaaaaggtaaaactacggagacagtgaaaagatcagtggttgccaggggttggggatgaataagtgaagc-------acagaggatttttagggcactgaaactacttatttttctgtatgatgctacaatggcagaaacatttatgtta----------ttttattttttgagattgagtctcactctgtcacccagaatggagtgcagtggtgtgatctcgactcactgcaacctctgcctcccaggctcaagcgattctcctgcctcagc--------------------cttccaagtagctaagactacaggcatgcgccaccacacccggctaatttttgtatttttagtagagatgggtttttgc-gtgttggccaggctggtctagaactcctga-tctcaa-gagatccacccgcctccacctcccaaagtgctgagattacaggaatgagccactgtgcctggccagccgatacattgttgaatagagaatggagaatatccaacgccagaaatgtgctgtcaactctggactt----tgatgaggatatgttgacgtggacgcctcgactgtcacac--gtg-ccacct-ggtgcagggcgctggtggtgggggaggctgggcgtaggtatatgtgtgtgtggcagggggcatatgggaactttctgtattttccactcaggacaattttgctgtaaacgcaaaactgctct---aaaaagcaaattttattatttaaaaGATGATTTT-AAAATTAATATATTTAAATTTTTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66762 1112 - 106623 ggcactttcttac-caaactaaaccacactcttactatgcagtccagcaatcacactccttgatatttacccaaagggacagaaaacgtttttgtccacacgaaaacctgcacatggaggtttatagcagcttttttcataatttatagcagcttta--ttcataattgcc-aaacttggaagcaaccaagatgtccttcagcaggtgaatgggtaaataacctatggtgcattcagacgatggaatattattcagtgctaaaatgcaatgaactacacagccatgaaaatacatacagaaaacttaaatgcata-tactatgtgaaagaagacaatctgaaaaggctatttaccttatgattgcaattatatgacgttctggaaaaggtaaaactatggagacagtgaaaagatcagtggttgccacgggttggggatgaataagtgaagc-------acagaggatttttagggcactgaaactacttatttttctgtatgatgctacaatggcagaaacatttctgtta----------ttttattttttgagattgagtctcactctgtcgcccagaatggagtgcagtggtgcgatctcgactcactgcaacctctgcctcccaggctcaagcgattctcctgcctcagc--------------------cttccaagtagctaagactacaggcatgcgccaccacgcccggctaatttttgtatttttagtagagatgggttttcgccgtgttggccaggctggtctcgaactcctga-tctcaa-gagatccacccgcctccacctcccaaagtgctgagattacaggcatgagccactgcgcctggccagccgatacattgttggatagagaatggagaatatccaacgccaaaaatgtgctgtcaactctggactt----tgatgaggatatgttgacgtggacgcattgactgtcacac--gtg-ccacct-ggtgcagggcgttggtggtgggggaggctgggtgtaggtatatgtgcgtgtggcagggggcatatgggaactttctgtattttccactcaggaaaattttgctgtaaacccaaaactgctct---aaaaagcaaattttattatttaaaaGATGATTTC-AAAATTAATATATTTAAATTTTTAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2842126 1114 - 123690457 ggcagtttcttac-caaactaaaccatactcttactatgcagtccagcaatcacactccttggtatttacccaaagggacagaaaacgtttttgtccacacgaaaacctgcacatggaggtttatagcagctttattcataatttatagcagcttta--ttcataattgccaaaacttggaagcaaccaagatgtccttcagcaggtgaacgggtaaataatctatggtacattcagacgatggaatattattcagtgctaaaatgaaatgaactacacagccatgaaaatacatacagaaaacttcaatgcata-tactgtgtgaaagaagacaatctgaaaaggctatttaccttatgactgcaattatatgacattctggaaaaggtaaaactatggagacagtgaaaagatcagtggttgccaggggttggggatgaataagtgaagc-------acagaggatttttagggcactgaagctactaatttttctgtatgatgctacaatggcagaaacatttatgtta----------ttttattttttgaga-cgagtctcactctgtcgcccaggatggagtgcagtggtgcaatcttgactcactgcaacctccgcctcctgggttcaagcgactgtcctgcctcagc--------------------cttccacgtagctgagactacacgtgtgcgccatcatgcccggctaatttttgtatttttagtagagatgggttttcgccatgttggccaggctggtctagaactcctga-tctcaa-gagatccacccgcctcgacctcccaaagtgctgggattacaggcatgagccactgcacccggccagccgatacattgttgaatagagaatggagaatatccagtgccaaaaatgcgctgtcgactctggactt----tgatgaggatatgttgacgtggacgcatcgactgtcacacgtgtg-ccacct-ggtgcagggcgttcgtggtgggggaggctgggcgtaggtatatgcgtgtgtggcagggggtatatgggaactttctgtattttccactcaggaaaattttgctgtaaacccaaaactgctct---aagacgtaaattttattatttaaaaGATGATTTT-AAAATTAATATATTTAAATTTTGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2338238 1131 - 204787373 ggcagtttcttac-caaaccaaaccatactcttactatgcagtccagcaatcacactccttggtatttacccaaagggatggaaaatgtttttgtccacacgaaaacctgcacatggagatttatagcagctttattcataatttatagcagcttta--ttcataattgccaaaacttggaagcaatcaagatgcccttcagcaggtgaatgggtaaataatctatggtacattcagacgatggaatattattcagtgctaaaatgaaatgaactatacagctatgaaaatacatacagaaaacttaaatgcata-tactatgtgaaagaggagaatctgaaaaggctacttacctcatgattgcaattatatggtattctggaaacggtaaaattatggagacagtaaaaagatcagtggttgccaggcgttagggatgaataagtgaagc-------acagaggatttttagggcactgaaactacttatttttctgtatgatgctacaatggcagaaacatttatttta----------ttttattttttgagatgcagtcttgctctatcgcccaggatggagtgcagtggtatgatctcgactcactgcaacctctgcctcccaggctcaagcgattctcctgcctcagctttccaactagctcctcagtcttccaagtagctgagactacaggtgtgcgtcatcacacccagctaatttttgtatttttagtagagatggggtttcgccatgttggccaggctggtcttgaactcctga-ccccaa-gagatccacctgcctcggcctcccaaactgctgggattacaggcatgaaccaccgcgcccgaccagccgatacattgttgaatagagaat---gaatgtccaacgccaaaaatgaactgtaaactctggactt----tgatgaggatatgctgacgtggacgcatggactgtcacacatgtg-cccccc--gtgcagggtgttgatggtgggggaagctgggcgtatggatatgtgtgtgtggcagggggtatatgggaactttctgtattttccactcaggaaaattttgctgtgaacctaaaactgcttt---aaaaagtaaattttattatttaaaaGATGATTTT-AAAATTAATATATTTAAATTTTTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192403403 1131 - 192460366 ggcagtttcttac-caaaccaaaccatactcttactatgcagtccagcaatcacactccttggtatttacccaaagggatggaaaatgtttttgtccacacgaaaacctgcacatggagatttatagcagctttattcataatttatagcagcttta--ttcataattgccaaaacttggaagcaatcaagatgcccttcagcaggtgaatgggtaaataatctatggtacattcagacgatggaatattattcagtgctaaaatgaaatgaactatacagctatgaaaatacatacagaaaacttaaatgcata-tactatgtgaaagaagacaatctgaaaaggctacttacctcatgattgcaattatatggtattctggaaacggtaaaattatggagacagtaaaaagatcagtggttgccaggcgttagggatgaataagtgaagc-------acagaggatttttagggcactgaaactacttatttttctgtatgatgctacaatggcagaaacatttatttta----------ttttattttttgagatgcagtctcgctctatcgcccaggatggagtgcagtggtatgatctcgactcactgcaacctctgcctcccaggctcaagcgattctcctgcctcagctttccaactagctcctcagtcttccaagtagctgagactacaggtgtgcgtcatcacacccagctaatttttgtatttttagtagagatggggtttcgccatgttggccaggctggtcttgaactcctga-ccccaa-gagatccacctgcctcggcctcccaaactgctgggattacaggcatgaaccaccgcgcccgaacagccgatacattgttgaatagagaat---gaatgtccaacgccaaaaatgaactgtaaactctggactt----tgatgaggatatgctgacgtggacgcatggactgtcacacatgtg-cccccc--gtgcagggtgttgatggtgggggaagctgggcgtatggatatgtgtgtgtggcagggggtatatgggaactttctgtattttccactcaggaaaattttgctgtgaacctaaaactgcttt---aaaaagtaaattttattatttaaaaGATGATTTT-AAAATTAATATATTTAAATTTTTAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19142852 1131 - 19675229 ggcagtttcttac-caaaccaaaccatactcttactatgcagtccagcaatcacactccttggtatttacccaaagggatggaaaatgtttttgtccacacgaaaacctgcacatggagatttatagcagctttattcataatttatagcagcttta--ttcataattgccaaaacttggaagcaatcaagatgcccttcagcaggtgaatgggtaaataatctatggtacattcagacgatggaatattattcagtgctaaaatgaaatgaactatacagctatgaaaatacatatagaaaacttaaatgcata-tactatgtgaaagaagacaatctgaaaaggctacttacctcatgattgcaattatatggtattctggaaaaggtaaaattatggagacagtaaaaagatcagtggttgccaggcgttagggatgaataagtgaagc-------acagaggatttttagggcactgaaactacttatttttctgtatgatgctacaatggcagaaacatttatttta----------ttttattttttgagatgcagtctcgctctatcacccaggatggagtgcagtggtatgatctcgactcactgcaacctctgcctcccaggctcaagcgattctcctgcctcagctttccaactagctcctcagtcttccaagtagctgagactacaggtgtgcgtcatcacacccagctaatttttgtatttttagtagagatggggtttcgccatgttggccaggctggtcttgaactcctga-ccccaa-gagatccacctgcctcggcctcccaaactgctgggattacaggcatgaaccaccgcgcccaaccagccgatacattgttgaatagagaat---gaatgtccaacgccaaaaatgaactgtaaactctggactt----tgatgaggatatgctgacgtggacgcatggactgtcacacatgtg-cccccc--gtgcagggtgttgatggtgggggaagctgggcgtatggatatgtgtgtgtggcagggagtatatgggaactttctgtattttccactcaggaaaattttgctgtgaacctaaaactgcttt---aaaaagtaaattttattatttaaaaGATGATTTT-AAAATTAATATATTTAAATTTTTAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16379659 1133 - 16847902 ggcagtttcttac-caaaccaaaccatactcttactatgcagtccagcaatcacactccttggtatttacccaaagggatggaaaatgtttttgttcacatgaaaacctgcacatggagatttatagcagctttattcataatttatagcagctttattttcataattgccaaaacttggaagcaatcaagatgtccttcagcaggtgaatgggtaaataatccatggtacattcagatgatggaatattattcagtgctaaaatgaaatgaactatacagctatgaaaatacatacagaaaacttaaatgcata-tactatgtgaaagaagacaatctgaaaaggctacttacctcatgattgcaattatatgatattctggaaaaggtaaaattatggagacagtaaaaagatcagtggttgccaggcgttagggatgaataagtgaagc-------acagaggatttttagggcactgaaactatttatttttctgtatgatgctgcaatggcagaaacatttatttta----------ttttattttttgagatggagtttcgctctatcgcctaggatggagtgcagtggtgtgatctcgactcactgcaacctctgcctcccaggctcaagcgattctcctgcctcagctttccaactagctcctcagtcttccaagtagctgagactacaggtgtgcgtcaccacacccagctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctga-ccccaa-gagatccacctgcctcggcctcccaaactgctgggattacaggcatgaaccaccgcgcctgaccagccgatacattgttgaatagagaat---gaatgtccaacgccaaaaatgaactgtaaactctggactt----tgataaggatatgctgatgtggacgcatcgactgtcacacatgtg-cccccc--ttgcagggtgttgatggtgggggaagctgggcgtatggatatgtgtgtgtggcagggcgtatatgggaactttctgtattttccacttaggaaaattttgctgtgaacctaaaactgctct---aaaaagtaaattttattatttaaaaGATGATTTT-AAAATTAATATATTTAAATTTTTAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91349988 1131 + 91754291 ggcagtttcttac-caaaccaaagcatactcttactatgcagtccagcaatcatactccttggtatttacccaaagggatggaaaatgtttttgtccacatgaaaacctgcacacggagatttatagcagctttattcacaatttatagcagcttta--ttcataattgccaaaacttggaagcaatcaagatgcccttcagcaggtgagtgggtaaataatctatggtacattcagacgatggaatattattcagtgctaaaatgaaatgaactatacagctatgaaaatacatacagaaaacttaaatgcata-tactatgtgaaagaagacaatctgaaaaggctacttacctcatgattgcaattatatgatattctggaaaaggtaaaattatggagacagtaaaaagatcagtggttgccaggcgttagggatgaataagtgaagc-------acagaggatttttagggcactgaaactacttatgtttctgtatgattctacaatggcagaaacatttttttaa----------ttttattttttgagatggagtctcactctatcgccgaggatggagtgcagtggtgtgatctcgactcactgcaacctctgcctcccaggctcaagcgattctcctgcctcagctttccaactagctcctcagtcttccaagtagctgatactacaggtgtgcgtcatcacacccagctaatttttgtatttttagtagagatggggtttcgccatgttgaccaggctggtcttgaactcctgatccccaa-gagatccacctgcctcggcctcccaaactgctgggattacaagcatgaaccaccgcgcctgaccagccgatacattgttgaatagagaat---gaatgtccagcgccaaaaatgaactgtaaactctggactt----tgatgaggatatgctgacacagactcatggactgtcacacacgtg-cccccc--gtgcagggtgttgatggtgggggaggctgggcatatggatatgcgtgtgt-gcagggggtatatgggaactttctgtattttccactcaggaaaattttgctgtgaacctaaaactgctct---aaaaagtaaattttattatttaaaaGATGATTTT-AAAATTAATATATTTAAATTTTTAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1416141 1129 + 1977891 ggcagtttcttac-caaaccaaaccatactcttactatgcagtccagcaatcacactccttggtatttacccaaagggatggaaaatgtttttgtccacatgaaaacctgcacatggagatttatagtagctttattcataatttatagcagcttta--ttcataattgccaaaacttggaagcaatcaagatgtccttcagcaggtgaatgggtaaataatctatggtacattcagatgatggaatattattcagtgctaaaatgaaatgaactatacagctatgaaaatacatacagaaaacttaaatgcata-tactatgtgaaagaagacaatctgaaaaggctacttacctcatgattgcaattatatgatattctggaaaaggtaaaattatggagacagtaaaaagatcagtggttgccaggcgttagggatgaataagtgaagc-------acagaggatttttagggcactgaaact--ttatttttctgtatgatgctgcaatggcagaaacatttatttta----------ttttattttttgagatggagtctcgctctatcgcctaggatggagtgcagtggtgtgatctcgactcactgcaacctctgcctcccaggctcaagcgattctcctgcctcagctttccaactagctcctcagtcttccaagtagctgagactacaggtgtgcgtcaccacacccagctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctga-ccccaa-gagatccacctgcctcggcctcccaaactgctgggattacaggcatgaaccaccgcgcctgaccagccaatacattgttgaatagagaat---gaatgtccaacgccaaaaatgaactgtaaactctggactt----tgatgaggatatgctgatgtggacgcatcgactgtcacacatgtg-cccccc--ctgcagggtgttgatggtcggggaagctgggcgtatggatatgtgtgtgtggcagggcgtatatgggaactttctgtattttccacttaggaaaattttgctgtgaacctaaaactgctct---aaaaagtaaattttattatttaaaaGATGATTTT-AAAATTAATATATTTAAATTTTTAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7355770 1106 - 7796314 ggcagtttcttac-caaactaaaccatactcttactatgcagtccagcaatcacactccttggtatttacccaaagggacagaaaatgtttttgtccacatgaaaatctgcacacggagatttatagcagcttta------------------------ctcataattgccaaaacttggaaacaatcaagatgtccttcagcaggtgaacgggtaaataatctatggtacattcagatgatggaaattatttcagtgctaaaatgaaatgaactatacagctatgaaaatacatacagaaaacttaaacgcata-tacta--tgaaataagacaatctgaaaaggctacttacctcacgattgtaattatatgatattctggaaaaggtaaaattatggagacagtaaaaagatcagtggttgccaggcattagggatg-ataagtgaagc-------acagaggaattttagggcactgaaactacttatttttctgtatgatgctacaatggcagaaacacttatttta----------ttttattttttgagacagagtctcactctatcgcccaggatggagtatagtggtgtgatctcgactcactgcaacctctgcctcccaggctcaagcgattctcctgcctcagctttccaactagctcctcagtcttccaagtagctgagactaaaagtgtgcgtcatcacacctggctaatttttgtatttttagtagatatggggtttcgccatattggccaggctggtcttgaactcctga-cctcaa-gagatccacctgcctcagcctcccaaagtgctgggattacaggcatgaaccaccgcgcctgaccagctgatacattgttgaatagagaat---gaatgtccaacgccaaaaatgaactgtaaactctggactt----tgatgaggatatgctgacgtggatgcatcgactgtcacacatgtg-ccccct--gtgcagggtgttgatggtgggggaggctgggcgtatggatatgcgtgtgtggcagggtgtatatgggaactttctgtattttccactcaggaaaattttgctgtgaacctaaaactgctct---aaaaagtaatttttattatttaaaaGATGATTTT-AAAACTAATATATTTAAATTTTTAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73830141 1088 + 74750902 ggcagtttcttacaaaaatgaaaccattctcttactacccagtctagcaatcacactcgggggtatttacccaaagggacggaaaacttttttgtccacacaaaaacctgtacgtggatgtttatagcagcctta------------------------ttcataattgccaaaacttggaagcaaccacgatgtccttcagcagggg------------acgtacggaacactcagacgacggaatagtgttcagcgctaaaatgaca--aactatacagccacaaaaagccatacagaaaactgcaatgcatgttgccatgtgaaagaaggcaatctgaaaaggctacttaccttatgattcccatcacatgacgttctggaaagggcaaaattatggagacagtaaaaagatccgtggttgccagggcttagggctgaacaggtggagc-------acagaggaggtttagggcactgaaaatacttgtttttctatatgatgctacaatggcagaaaca--tattttattttgttttgttttattttttgagacggagcctcgctctgtcacccaggctggagtgcagcggcatgaccttggttcactgcaacctccgcctcctgggttcaagtgattctcctgcctcagc--------------------ctcccaagtagctgggattataggcgcgcgacaccatgctcagccaatttttgtatttttagtagagtcagggttttaccatgttgcccaggtt-ttcttgaactcctga-cctcaa-gagatctgcctacctcaacctcccaaattgctgggattacaggcatgagccaccgcgcccggccagcagatacactgttgaatgga-------gaatgtccgacgccaaaagtgaactgtagacgctggaccttgagtgatgaggataggttgctgtggatgcatcggctgtcacaaatgtaccccctctggcgcaggatgttgatggtgggggaggctgtgcgtgcgcagatg-gtgtgtggcagggggtatatgggaactttctgtatctcccactctggaaaattttgctgtgaacctaaaactgctct-aaaaaaagtaaattttattgtttaaaaGATGatttt-taaattaatatacttaaatttttaa i calJac3.chr17 I 3482 C 0 s saiBol1.JH378146 17276412 1074 - 17725628 ggcagtttcttac-aaaattaaaccacactcttactatacagtctagcaatcacactccatggtatttaacaaaagggacggaaaacttttttgtccacacaaaaacctgtacatggatgttggtagcagcttta------------------------ttcataattgccaaaacttggaagcaatcaagatgtcctttagcagcag------------gtctacagaacattcagacaatgtgatattattcagtgctaaagtgaaatgaactatacagccat-gaaatccatacagaaaacttaaatgcatgttactatgtgaaagaaggcaatctgaaaaggctacttaccttatgattcccattatatgacattctggaaagggcaaaattatggagacagtaacaagatccgtggttgccaggggtt-gggctgagcaggtggagcaggctgaacagaggagttttagggccctgaaaatacttgttattctgtatgacactacaacggcagaaaca--tatttta----------ttttattttttgagatgcagccttgctctgtcgcccaggctggagtgcagtggcgtgaccttggctcactgcaacctctgcctcctgggttcaagtgattctcctgcctcagc--------------------ctcccaagtagctgggattacaggcacacaacaccatgctcagctaaattttgtattttta-------tagagtttcaccatgttgcccaggctgttcttgaactcctga-cctcaa-gacatctgcctacctcaacctcccaaagtgctgggattacaggcatgagccactgcgcccggccagcagatacactgctgagtgga-------gaatgtccgacaccaaaagtgaattgtagactctggactttgagtgatgaggatgtgctgctgtggacgcgtcggccgtcacaaacgta-ccgctctggc-cgggatgctgatggcgggggaggctgtgcgtttgtagatg-atgtgtggca-ggggtacacgggaaatttctgtatttcccactcaggaaaattttgctgtgaacctaaaactgctct--aaaaaagtaaactttattATTTGAAAGATGatttt-taaattaacatatttaaatttttta i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6365811 1072 + 6778120 ggcagcttcttac-aaaattaaaccatactcttactatacaat----cagtcacactccgtggtatttacccaaagggacggaaaacttttttgtccacacaaaaacctgtacatggatgtttatagcagcttta------------------------ttcataattgccaaaacttggaagcaatcaagatgtccttcagcagggg------------acctacggaacattcagacgatggaatgttattcagtgctaaaatgagatgaactatacagccat-ggaatccatacagataacctaaatgcatattactatgtgaaagaaagcaatctgaaaaggctacttacctcatgattcccactatatgacattctggaaagggcaaaattatgaacacagtaaaaagattcatggttgccaggggttagggctgaacaggtggagc-------acagaggagttttagggcactgaaaatacttgtttttctgtatgatactacaacggcagaaaca--tattttattttattttattttattttttgagatggagccttgctgtgttgcccaggctggagtgcagtggcatgaccttggttcactgcaacctccgcctcctgggttcaagtgattctcctgcctcagc--------------------ctcccaagtagctggaattacaggcacacaacaccatgctcagctaatttttgtattttta-tagagtcagggtttcaccatgtttcccaggctgttcttgaactcctga-cctcaa-gagatctgccta----------ccgaagtgctgggattacaggcatgagccactgcgcccggccagcagatacactgctgaatgga-------gaatgtccgacgccaaaagtgaactgtaaaccctggactgtgagtgatgaggatatgttgctgtggatgcatcgaccatcacaaatgca-cctctccggtgcaggatgctgatggc-ggggaggctgtgcgtttgtagatg-gtgtgtggcagggggtatacgggagc-ttctgtatttcccactcaggaaaattttgctgtgaacctaaaactgctctaaaaaaaagtaaatttgattatttaaaaGATGATTTT-TAAATGAATATATTTAAATTTTTTA i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2693883 1 - 6579706 I e canFam3.chr33 2315847 669 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I a score=703441.000000 s hg38.chr3_KI270934v1_alt 54603 91 + 163458 AAGAATTAAGCACACATGGCACTAAC--GGGGCGGCTAGG-GAGCCAACCATCCATCAGTTGTGAGGAAGG----------------GGGAGG---CCTGCAGGCATGAAGGA-- s panTro5.chr3 2526785 91 - 202621043 AAGAATTAAGCACACATGGCACTAAG--GGGGCGGCTAGG-GAGCCAACCATCCATCAGTTGTGAGGAAGG----------------GGGAGG---CCTGCAGGCACGAAGGA-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 116928 91 - 190779 AAGAATTAAGCACACATGGCACTAAG--GGGGCGGCTAGG-GAGCCAACCATCCATCAGTTGTGAGGAAGG----------------GGGAGG---CCTGCAGGCACGAAGGA-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 67874 91 - 106623 AAGAATAAAGCACACATGGCACTAAG--GGGGCGGCTAGG-GAGCCAACCATCCATCAGTTGTGAGGAAGG----------------GGGAGG---CCTGCAGGCACGAAGGA-- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2843240 90 - 123690457 AAGAATTAAGCACATATGGCACTAAG--GGGGCGGCTAGG-GAGCCCACCGTCCATCAGTTGTGAGGAAGG----------------GGGAGG---CC-GCAGGCACGAAGGA-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2339369 91 - 204787373 AAGAATTAAGCACACATTGTACTGAG--GGGGTGGCTAGG-GAGTCAACCGTCCGTCAGTTGTGAGGAAGG----------------GGGAGG---CCAGCAGGCACGAAGGA-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192404534 91 - 192460366 AAGAATTAAGCACACATTGTACTGAG--GGGGTGGCTAGG-GAGTCAACCGTCCGTCAGTTGTGAGGAAGG----------------GGGAGG---CCAGCAGGCACGAAGGA-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19143983 91 - 19675229 AAGAATTAAGCACACATTGTACTGAG--GAGGTGGCTAGG-GAGTCAACCGTCCGTCAGTTGTGAGGAAGG----------------GGGAGG---CCAGCAGGCACGAAGGA-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16380792 91 - 16847902 AAGAATTAAGCACACATTGTACTGAG--GGGGTGGCTAGG-GAGTCAACCGTCCGTCAGTTGCGAGGAAGG----------------GGGAGG---CCAGCAGGCAGGAAGGA-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91351119 91 + 91754291 AAGAATTAAGCACACATCGTACTGAG--GGGGCGGCTAGG-GAGTCAACTGTCCGTCAGTTGCGAGGAAGG----------------GGGAGG---CCAGCAGGCACGAAGGA-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1417270 91 + 1977891 AAGAATTAAGCACACATTGTACTGAG--GGGGTGGCTAGG-GAGTCAACCGTCCGTCAGTTGCGAGGAAGG----------------GGGAGG---CCAGCAGGCACGAAGGA-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7356876 91 - 7796314 AAGAATTAAGCACACATTGTACTAAG--GGGGTGGCTAGG-GAGTCAACCGTCCGTCAGTTGCGAGGAAGG----------------GGGAGG---CCAGCAGGCACAAAGGA-- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73831229 88 + 74750902 aaGAATAAAGCACACATGGCACTAAG--GGGGCAGCTTGG-GAGCCAAGCACCCGTCAGTTGCGAGGAAGA------------------GAGG---CCCGTAGGCACG-TGGA-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17277486 73 - 17725628 aaGGATTAAGCACACACGGCACTAAG--GGAGCAGCTTGG-GAGCCAACCACCCGTTCGTTTCGAGGAAGG------------------GAGA---C------------------ i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6366883 91 + 6778120 AAGAATTAAGCACACATGGCACTAAG--GGGGCAGCTTGG-GAGCCAACCACCCGCCCGTTGTGAGGGAGG----------------GAGAGG---CCTGCAGGCACGATGGA-- i cebCap1.NW_016107444v1 C 0 C 0 s dasNov3.JH569502 2693884 114 - 6579706 AGGAATTGAATAAA-GTGGCACAGGGGTGAGGCAGGTAGGTGGGAACATTGTCCAAGAGTTACTAGGAAGGGAATACAGAACAAAAAGGGAGGTACCGTGCAAATGTGGAACGGG i dasNov3.JH569502 I 1 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e canFam3.chr33 2315847 669 - 31377067 I e otoGar3.GL873829 201730 12 + 608964 I a score=855012.000000 s hg38.chr3_KI270934v1_alt 54694 110 + 163458 GCTGGT------GAGACCGCCCTCA--CCTGGCT-----GCCAGA--------ATCCCAATTCC----------ATGAGGACCTTGTCATGTGACTCAAAGTCAGAGACAGCAGAAGGTCCAAAAGTTACAACTTACCTGA s panTro5.chr3 2526876 110 - 202621043 GCTGGT------GAGACCGCCCTCA--CCTGGCT-----GCCAGA--------ATCCCAGTTCC----------ATGAGGACCTTGTCATGTGACTCAAAGTCAGAGACAGCAGACGGTCCAAAAGTTACAACTCACCTGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117019 110 - 190779 GCTGGT------AAGACCGCCCTCA--CCTGGCT-----GCCAGA--------ATCCCAGTTCC----------ATGAGGACCTTGTCATGTGACTCAAAGTCAGAGACAGCGGACGGTCCAAAAGTTACAACTCACCTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 67965 110 - 106623 GCTGGT------GAGACCGCCCTCA--CCTGGCT-----GCCAGA--------ATCCCAATTCC----------ATGAGGACCTTGTCATGTGACTCAAAGTCAGAGACAGCAGAAGGTCCAAAAGTTACAACTTACCTGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2843330 108 - 123690457 GCTGGT------GCGACCGCCCTCA--CCTGGCC-----GCCAGG--------ATCCCAATTCC----------ATGAGGACTTTGTCATGTGACTC--AGTCAGAGACAGCAGAAGGTACAAAAGTTACAACTTACCTGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2339460 110 - 204787373 ACTGAT------GAGACAGCCCTCA--CCTGGCC-----GCCAGA--------ATCCCACTTCC----------GTGAGGACTTCGTCATGTGACTCAGAGTCGGAGCCAGCAGGAGGCCCAAAAGCTACGACTCACCCGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192404625 110 - 192460366 ACTGAT------GAGACAGCCCTCA--CCTGGCC-----GCCAGA--------ATCCCACTTCC----------GTGAGGACTTCGTCATGTGACTCAGAGTCGGAGCCAGCAGAAGGCCCAAAAGCTACGACTCACCCGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19144074 110 - 19675229 ACTGAT------GAGACAGCCCTCA--TCTGGCC-----GCCAGA--------ATCCCAATTCC----------GTGAGGACTTCGTCATGTGACTCAGAGTCGGAGCCAGCAGAAGGCCCAAAAGCTACGACTCACCCGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16380883 110 - 16847902 ACTGAT------GAGACAGCCCTCC--CCTGGCC-----GCCAGA--------ATCCCAATTCC----------CTGAGGACTTCCTCATGTGACTCAGAGTCGGAGCCAGCAGAAGGCCCAAAAGCTACGACTCACCCGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91351210 92 + 91754291 ------------------------A--CCTGGCC-----GCCAGA--------ATCCCAATTCC----------GTGAGGACTTCGTCATGTGACTCAGAGTCGGAGACAGCAGAAGGCCCAAAAGCTACGACTCACCCGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1417361 110 + 1977891 ACTGAT------GAGACAGCCCTCA--CCTGGCC-----GCCAGA--------ATCCCAATTCC----------CTGAGGACTTCCTCATGTGACTCAGAGTCGGAGACAGCAGAAGGCCCAAAAGCTACGACTCACCCGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7356967 110 - 7796314 ACTGAT------GAGACAGCCCTCA--CCTGGCC-----GCCAGA--------ATCCCAGTTCC----------ATGAGGACTTCGTCATGTGGCTCAAAGTCGGAGACAGTAGAAGGCCCAAAAGCTACAACTCAGGCGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73831317 110 + 74750902 GCTGGT------GAGACTGCCCTCA--CCTGGCC-----AGCAGA--------ATCCCAAGTCC----------ATGAGGGCTTTGACGTGTGACTCAAGGTCAGAGACAGCAGAAGGTCCAAACGTGACAATTCATCCGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17277559 98 - 17725628 ------------------GCCCTCA--CCCGGCC-----ACCAGA--------ATCCCAAGTCC----------ACGAGGGCTTTGTCATGCGACTCAAGGTCAGAGACAGCAGAAGGTCCAAATGTTACAATTCATCCAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6366974 107 + 6778120 GC---T------GAGGCTGCCCTCA--CCTGGCC-----ACCAGA--------ATCCCAAGTCC----------ATGAGGGCTTCGTCATGTGACTCAAGGTCGGAGACAGCAGAAGGTCCAAACGTTACAACACAGCCAA i cebCap1.NW_016107444v1 C 0 I 50 s otoGar3.GL873829 201742 128 + 608964 GCTGGT------GAGACTGCCTTTG--TCTGACCCCTTTGTCTGACCATTGCGATCCCAACACCCAGCTATGTGACAAGGATTTTGCAATGTGACTTGAGGTCAAGGAAGGCATA-GGTCCAAAAA----AGCTCATATGC i otoGar3.GL873829 I 12 C 0 s dasNov3.JH569502 2693998 126 - 6579706 GATGGTGGGAGAGGGACTGCTCTTACCCCTGACA-----ATTGCA--------GACCCAAGGCTAAATTATATGATGAGGACTTGGTAACCTGACTCCAGGTCCT-TTTAGCATAAGGTCCAAAAGGTAC-ACTAGTTTAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e canFam3.chr33 2315847 669 - 31377067 I a score=128418.000000 s hg38.chr3_KI270934v1_alt 54804 21 + 163458 AACCCACCAGGCACTATTGGC s panTro5.chr3 2526986 21 - 202621043 AACCCACCAGGCACTACTGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117129 21 - 190779 AACCCACCAGGCACTATTGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 68075 21 - 106623 AACCCACCAGGCACTATTGGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2843438 21 - 123690457 AACCCACCAGGCACTATTGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2339570 21 - 204787373 AACCCACCAGGGACTATTGGC i rheMac8.chr2 C 0 I 628 s macFas5.chr2 192404735 21 - 192460366 AACACACCAGGGACTATTGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19144184 21 - 19675229 AACCCACCAGGGACTATTGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16380993 21 - 16847902 AACCCACCAGGGACTATTGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91351302 21 + 91754291 AACCCACCAGGGACTATTGGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1417471 21 + 1977891 AACCCACCAGGGACTATTGGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7357077 21 - 7796314 AACCCACCAGGGACTGTTGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73831427 7 + 74750902 TACCC-CC------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17277657 20 - 17725628 TATCC-CCAAAGACCGTTGGC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 201870 21 + 608964 AACCCATTGTAGACTCTTGGC i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2694124 21 - 6579706 ATCTCATCCTAAGCCCTTGGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e cebCap1.NW_016107444v1 6367081 50 + 6778120 I e canFam3.chr33 2315847 669 - 31377067 I a score=54361.000000 s hg38.chr3_KI270934v1_alt 54825 12 + 163458 AAAGGATTCA--CC s panTro5.chr3 2527007 12 - 202621043 AAAGGATTCA--CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117150 12 - 190779 AAAGGATTCA--CC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 68096 12 - 106623 AAAGGATTCA--CC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2843459 12 - 123690457 AAAGGATTCA--CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2340219 10 - 204787373 AAAGGATTCA---- i rheMac8.chr2 I 628 C 0 s macFas5.chr2 192404756 10 - 192460366 AAAGGATTCA---- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19144205 10 - 19675229 AAAGGATTCA---- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16381014 10 - 16847902 AAAGGATTCA---- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91351323 12 + 91754291 AAAGGATTCACC-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1417492 12 + 1977891 AAAGGATTCACC-- i manLeu1.NW_012102020v1 C 0 I 554 s colAng1.NW_012118932v1 7357098 10 - 7796314 AAAGGATTCA---- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73831434 11 + 74750902 -AAGGACTCA--CC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17277677 12 - 17725628 AAAGGACTCA--CC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 201891 12 + 608964 AAGGGATGGA--CC i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2694145 12 - 6579706 GAGAAATTAA--CC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e cebCap1.NW_016107444v1 6367081 50 + 6778120 I e canFam3.chr33 2315847 669 - 31377067 I a score=8625.000000 s hg38.chr3_KI270934v1_alt 54837 1 + 163458 C s panTro5.chr3 2527019 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117162 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 68108 1 - 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2843471 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2340229 1 - 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192404766 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19144215 1 - 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16381024 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91351335 1 + 91754291 C i chlSab2.chr15 C 0 I 524 s manLeu1.NW_012102020v1 1418058 1 + 1977891 C i manLeu1.NW_012102020v1 I 554 C 0 s colAng1.NW_012118932v1 7357108 1 - 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73831445 1 + 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17277689 1 - 17725628 C i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 201903 1 + 608964 C i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2694157 1 - 6579706 C i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e cebCap1.NW_016107444v1 6367081 50 + 6778120 I e canFam3.chr33 2315847 669 - 31377067 I a score=79669.000000 s hg38.chr3_KI270934v1_alt 54838 18 + 163458 CCACCATGGAAGGCACGT s panTro5.chr3 2527020 18 - 202621043 CCACCATGGAAGGCATGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117163 18 - 190779 CCACCATGGAAGGCATGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 68109 18 - 106623 CCACCATGGAAGGCATGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2843472 18 - 123690457 CCACCATGGAAGGCATGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2340230 18 - 204787373 CCGCCATGGAAGACATGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192404767 18 - 192460366 CCGCCATGGAAGACGTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19144216 18 - 19675229 CCGCCATGGAAGACGTGG i macNem1.NW_012014355v1 C 0 I 455 s cerAty1.NW_012004056v1 16381025 18 - 16847902 CCGCCATGGAAGACGTGG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1418059 18 + 1977891 CCGCCATGGAAGACGTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7357109 18 - 7796314 CCACCATGGAAGACGTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73831446 18 + 74750902 ATGCGCAGTTAGATATAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17277690 18 - 17725628 ATGCACGGTTAGACGTGT i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 201904 16 + 608964 TTGTCGTGAAAGACAT-- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2694158 16 - 6579706 ATGCTGTGGAAGACAT-- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e cebCap1.NW_016107444v1 6367081 50 + 6778120 I e canFam3.chr33 2315847 669 - 31377067 I e chlSab2.chr15 91351336 524 + 91754291 I a score=84010.000000 s hg38.chr3_KI270934v1_alt 54856 13 + 163458 GAGCGCTGTGGGT s panTro5.chr3 2527038 13 - 202621043 GAGCGCTGTGGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117181 13 - 190779 GAGCGCTGTGGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 68127 13 - 106623 GAGCGCTGTGGGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2843490 13 - 123690457 GAGCGCTGTGGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2340248 13 - 204787373 GAGCGCTGTGGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192404785 13 - 192460366 GAGCGCTGTGGGC i macFas5.chr2 C 0 I 628 s macNem1.NW_012014355v1 19144689 13 - 19675229 GAGCGCTGTGGGG i macNem1.NW_012014355v1 I 455 C 0 s cerAty1.NW_012004056v1 16381043 13 - 16847902 GAGCGCTGTGGGG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1418077 13 + 1977891 GAGCGCTGTGGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7357127 13 - 7796314 GAGCGCTGTGGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73831464 13 + 74750902 GACTGCTGTAGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17277708 13 - 17725628 GACTGCTGTAGGC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 201920 13 + 608964 GATTGCTATGGAT i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2694174 13 - 6579706 GATTTTCATAAAT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e cebCap1.NW_016107444v1 6367081 50 + 6778120 I e canFam3.chr33 2315847 669 - 31377067 I e chlSab2.chr15 91351336 524 + 91754291 I a score=20651.000000 s hg38.chr3_KI270934v1_alt 54869 5 + 163458 GCCCT s panTro5.chr3 2527051 5 - 202621043 GCCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117194 5 - 190779 GCCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 68140 5 - 106623 GCCCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2843503 5 - 123690457 GCCGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2340261 5 - 204787373 GCCGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192405426 5 - 192460366 GCCGC i macFas5.chr2 I 628 C 0 s macNem1.NW_012014355v1 19144702 5 - 19675229 GCCGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16381056 5 - 16847902 GCCGC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1418090 5 + 1977891 GCCGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7357140 5 - 7796314 GCCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73831477 5 + 74750902 ACTGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17277721 5 - 17725628 ACTGT i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 201933 5 + 608964 CCTGT i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2694187 5 - 6579706 ACTGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e cebCap1.NW_016107444v1 6367081 50 + 6778120 I e canFam3.chr33 2315847 669 - 31377067 I e chlSab2.chr15 91351336 524 + 91754291 I a score=36069.000000 s hg38.chr3_KI270934v1_alt 54874 4 + 163458 GTGT s panTro5.chr3 2527056 4 - 202621043 GTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117199 4 - 190779 GTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 68145 4 - 106623 GTGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2843508 4 - 123690457 GTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2340266 4 - 204787373 GTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192405431 4 - 192460366 GTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19144707 4 - 19675229 GTGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16381061 4 - 16847902 GTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91351860 4 + 91754291 GTGT i chlSab2.chr15 I 524 C 0 s manLeu1.NW_012102020v1 1418095 4 + 1977891 GTGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7357145 4 - 7796314 GTGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73831482 4 + 74750902 GCGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17277726 4 - 17725628 GTGC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 201938 4 + 608964 GTGC i otoGar3.GL873829 C 0 I 3 s dasNov3.JH569502 2694192 4 - 6579706 GTTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e cebCap1.NW_016107444v1 6367081 50 + 6778120 I e canFam3.chr33 2315847 669 - 31377067 I a score=131920.000000 s hg38.chr3_KI270934v1_alt 54878 15 + 163458 CATCAACTGCGGAGA s panTro5.chr3 2527060 15 - 202621043 CATCAACTGCAGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117203 15 - 190779 CATCAACTGCAGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 68149 15 - 106623 CATCAACTGCGGAGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2843512 12 - 123690457 CATCAGCTGCGG--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2340270 15 - 204787373 CATCAACTGTGGAGA i rheMac8.chr2 C 0 I 2 s macFas5.chr2 192405435 15 - 192460366 CATCAACTGTGGAGA i macFas5.chr2 C 0 I 2 s macNem1.NW_012014355v1 19144711 15 - 19675229 CATCAACTGTGGAGA i macNem1.NW_012014355v1 C 0 I 2 s cerAty1.NW_012004056v1 16381065 15 - 16847902 CATCAACTGTGGAGA i cerAty1.NW_012004056v1 C 0 I 425 s chlSab2.chr15 91351864 15 + 91754291 CATCAACTGTGGAGA i chlSab2.chr15 C 0 I 2 s manLeu1.NW_012102020v1 1418099 15 + 1977891 CATCAACTGTGGAGA i manLeu1.NW_012102020v1 C 0 I 2 s colAng1.NW_012118932v1 7357149 15 - 7796314 CATCAACTGTGGAGA i colAng1.NW_012118932v1 C 0 I 1504 s calJac3.chr17 73831486 15 + 74750902 CATCAACTGTGGGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17277730 15 - 17725628 CATCAACCGTGGAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6367131 15 + 6778120 CATCAACCGTGGAGA i cebCap1.NW_016107444v1 I 50 C 0 s otoGar3.GL873829 201945 12 + 608964 TGTCAAAGGTGA--- i otoGar3.GL873829 I 3 C 0 s dasNov3.JH569502 2694196 15 - 6579706 CAGCAAATGTGGGGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e canFam3.chr33 2315847 669 - 31377067 I a score=2300.000000 s hg38.chr3_KI270934v1_alt 54893 1 + 163458 A s panTro5.chr3 2527075 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117218 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 68164 1 - 106623 A i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 73831501 1 + 74750902 A i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17277745 1 - 17725628 A i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6367146 1 + 6778120 A i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 201957 1 + 608964 G i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2694211 1 - 6579706 A i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e macNem1.NW_012014355v1 19144726 2 - 19675229 I e canFam3.chr33 2315847 669 - 31377067 I e colAng1.NW_012118932v1 7357164 1504 - 7796314 I e manLeu1.NW_012102020v1 1418114 2 + 1977891 I e chlSab2.chr15 91351879 2 + 91754291 I e cerAty1.NW_012004056v1 16381080 425 - 16847902 I e macFas5.chr2 192405450 2 - 192460366 I e rheMac8.chr2 2340285 2 - 204787373 I e nomLeu3.chr11 2843524 0 - 123690457 C a score=1369134.000000 s hg38.chr3_KI270934v1_alt 54894 191 + 163458 AGGAAACCAGAAAGAGCAAAAGCAAAGCAGCGAGTGGGGAGC-AGAACCGCCCCAAACCCAAGGTCCCTCCTCCCC------TGTCCACCTTCA-CACAC--------------------TAAGCAATGGAGG--GAGCGGGAGGACAGAGCCTGTGTTTGATGGACAGCTCCTCCCGAGGCAGAGGAGAGGCCCAATACCTGGGAGAAGGCTGGGAGCTT s panTro5.chr3 2527076 191 - 202621043 GAGAAACCAGAAAGAGCAAAAGCAAAGCAGCGAGTGGGGAGC-AGAACCGCCCCGAACCCAAGGTCCCTCCTCCCC------CGTCCACCTTCG-GACAC--------------------TAAGCAATGGAGG--GAGCGGGAGGACAGAGTCTGTGTTTGATGGACAGCTCCTCCCGAGGCAGAGGAGAGGCCCAATACCTGGGAGAAGGTTGGGAGCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117219 191 - 190779 GGGAAACCAGAAAGAGCAAAAGCAAAGCAGCGAGTGGGGAGC-AGAACCGCCCCAAACCCAAGGTCCCTCCTCCCC------CGTCCACCTTCG-GACAC--------------------TAAGCAATGGAGG--GAGCGGGAGGACAGAGTCTGTGTTTGATGGACAGCTCCTCCCGAGGCAGAGGAGAGGCCCAATACCTGGGAGAAGGTTGGGAGCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 68165 191 - 106623 GGGAAACCAGAAAGAGCAAAAGCAAAGCAGCGGGTGGGGAGC-AGAACCGCCCCAAACCCAAGGTCCCTCCTCCCC------CGTCCACCTTCG-GACAC--------------------TACGCAATGGAGG--GAGCGGGAGGACAGAGTCTGTGTTTGATGGACAGCTCCTCCCGAGGCAGAGGAGAGGCCCAGTACCTGGGAGAAGGTTTGGAGCTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2843524 183 - 123690457 --------CGAAAGAGCAAAAGCAAAGCGGCGAGTGGGGAGC-AGAACCGCCCCAAACCCAAGGGCCCTCCTCCCC------CGTCCATCTTCG-GACAC--------------------TAACCAATGGAGG--GAGCGGGAAGACAGAGTCTGTGTGTGATGGACAGCCCCTCCCGAGGCAGAGGAGAGGCCCAATACCTGGGAGAAGGCTGGGAGCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2340287 190 - 204787373 GGGAAACCGGAAAGAGCAAAAGCAAAGTGGTGAGTGGGGAGC-AGAGCTGCCCCAAACCCAAGGTCCGTCCTCCCG------CGTCCA-CTTCC-GACGC--------------------TGAGCAATGGAGG--GAGCGGGAAGACAGAGTCTGTGTGTGATGGACAGCTCCTCCCGAGGCAGAGGAGAGGCCTGATGCGTGGGGGGAGGTTGAGAGCTT i rheMac8.chr2 I 2 C 0 s macFas5.chr2 192405452 190 - 192460366 GGGAAACCGGAAAGAGCAAAAGCAAAGTGGTGAGTGGGGAGC-AGAGCTGCCCCAAACCCAAGGTCCGTCCTCCCC------CGTCCA-CTTCC-GACGC--------------------TGAGCAATGGAGG--GAGCGGGAAGACAGAGTCTGTGTGTGATGGACAGCTCCTCCCGAGGCAGAGGAGAGGCCTGATGCGTGGGGAGAGGTTGAGAGCTT i macFas5.chr2 I 2 C 0 s macNem1.NW_012014355v1 19144728 190 - 19675229 GGGAAACCGGAAAGAGCAAAAGCAAAGTGGTGAGTGGGGAGC-AGAGCTGCCCCAAACCCAAGGTCCGTCCTCCCC------CGTCCA-CTTCC-GACGC--------------------TGAGCAATGGAGG--GAGCGGGAAGACAGAGTCTGTGTGTGATGGACAGCTCCTCCCGAGGCAGAGGAGAGGCCTGATGCGTGGGGGGAGGTTGAGAGCTT i macNem1.NW_012014355v1 I 2 C 0 s cerAty1.NW_012004056v1 16381505 190 - 16847902 GGGAAACCGGAAAGAGCAAAAGCAAAGTGGCGAGTGGGGAGC-AGAGCTGCCCCAAACCCAAGGTCCGTCCTCCCC------CGTCCA-CTTCC-GACAC--------------------TGAGCAATGGAGG--GAGCGGGAAGACAGAGTCTGTGTGTGATGGACAGCTCCTCCCGAGGCAGAGGAGAGGCCTGATGCCTGGGGGAAGGTTGAGAGCTT i cerAty1.NW_012004056v1 I 425 C 0 s chlSab2.chr15 91351881 188 + 91754291 GGGAAACCGGAAAGAGCAAAAGCAAAGTGGCGAGTGGGGAGC-AGAGCTGCCCCAAACCCAAGGTCCGTCCTCCCC------CGTCCA-CTTCC-GACAC--------------------TGAGCAATGGAGA--GAGCGAGAAG--AGAGTCTGTGTGTGATGGACAGCTCCTCCCGAGGCAGAGGAGAGGCCTGATGCCTGGGGGGAGGTTGAGAGCGT i chlSab2.chr15 I 2 C 0 s manLeu1.NW_012102020v1 1418116 190 + 1977891 GGGAAACCGGAAAGAGCAAAAGCAAAGTGGCGAGTGGGGAGC-AGAGCTGCCCCAAACCCAAGGTCCGTCCTCCCC------GGTCCA-CTTCC-CACAC--------------------TGAGCAATGGAGG--GAGCGGGAAGACAGAGTCTGTGTGTGATGGACAGCTCCTCCCGAGGCAGAGGAGAGGCCTGATGCCTGGGGGAAGGTTGAGAGCTT i manLeu1.NW_012102020v1 I 2 C 0 s calJac3.chr17 73831502 198 + 74750902 GGAAAACCAGGAAGAGCAAAAGCAAAGTGGCAAACGGGAAGC-AGGCCCGCCCCAAACCCAAGGTCCCTCCTCCCC------CGTCCATCTTCA-GACAC--AGCTTCCCCTGCTGCCACTGTGCAATGGAGG--AAGCAGGAGGACGGAGTTCGTGTGT-----------TCTCCCGAAGCAGACAAGAGATGCAGTGCCTGGGAGAATGATGGGGGCTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17277746 198 - 17725628 GGGAACCCAGGAAGAGCAGAAGCAACGTGGCAAGTAGGAAGC-AGGCCCGCCCCGAACCCAAGGCTCCTCCT-CCC------CATCCATCTTCA-GACACTGAGCTTCCCCTGCT-CCACTGAGCCATGGAGG--AAGCGGGAGGACAGAGTTCATGTGT-----------TTTCCCGAAGCAGACAAGAGATCCAGTGCCAGGGAGAATGATGGGGGCTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6367147 198 + 6778120 GGGAAACCAGGAAGAGCAGAAGCGAAGCGGCAAATGGGAAGC-AGG-CCGCCCCAAACCCAAAGTCCCTCCTCCCC------CGTCCATCTGCA-GGCACTAAGCTTCCCC-GCTCCCACTGAGCAATGGAGG--CAGCGGGAGGACGGAGTTTGTGTGT-----------TCTCCCAAAGAAGACAAGAGATCCAACGCCAGGGAGAATGATGGGGACTT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 201958 174 + 608964 GGAAAAACAGAAAGAACAAAAGGAAGGTGGCAGATGGGGG-------------------CAAAGTCCTTCTTCTCT------CATGCATCTTCCTCCCAC--------------------TGAGCAATGCAGG--GAACAGGAAGACAGGGTTTATGTGTGATGGACAACTCTGGAGGAAGCACTGGAGATGTCCAATGCCTGAGAAAGGATAGGGGGCTT i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2694212 194 - 6579706 GAGAAACCAGAAGGAACTAAGGCAAGGCAACAAGTGGGGAGCAAGGGCCACCCCTAACCTGAAGTTCCTCCTCCTTGCTAAGTTTCCT-CTCCT-GGCAC--------------------TGAGCAATGGAGGGTGGGCGGAAAGACAA----TGTATGTGACAGACAAA-CTGCCAGAGGCAGGGAAGATGTCCCAAACCTACGAGGACACTGAGGGCCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e canFam3.chr33 2315847 669 - 31377067 I e colAng1.NW_012118932v1 7357164 1504 - 7796314 I a score=644694.000000 s hg38.chr3_KI270934v1_alt 55085 87 + 163458 GCTACCCCTGAAGGAGACCCGCAGATTGGAGGGAAGAGAGGAGCCAGGGACCCTCGTGGGAGAGGATGCATTAAAAGTAGGGCTGTC s panTro5.chr3 2527267 87 - 202621043 GCTACCCCTGAAGGAGACCCGCAGATTGGAGGGAAGAGAGGAGGCAGGGACCCTCGTGGGAGAGGATGCATTAAAAGTAGGGCTGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117410 87 - 190779 GCTACCCCTGAAGGAGACCCGCAGATTGGAGGGAAGAGAGGAGGCAGGGACCCTCGTGGGAGAGGATGCATTAAAAGTAGGGCTGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 68356 87 - 106623 GCTACCCCTGAAGGAGACCCACAGATTGGAGGGAAGAGAGGAGGCAGGGACCCTCGTGGGAGAGGATGCATTAAAAGTAGGGCTGTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2843707 87 - 123690457 GCTACCCCTGAAGGAGACCCGCAGATTGGAGGGAAGAGAGGAGGCGGGGACTCTGGTGGGAGAGGATGCCTTAAAAGTAGGGCTGTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2340477 86 - 204787373 GATA-CGCTGAAGGAGACCCGCAGATTGGAGGGAAGAGAGGAGGCGGGGACCCTGGTGGGAGGCGATGCATTAAAAGTAGGGCTGTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192405642 86 - 192460366 GATA-CGCTGAAGGAGACCCGCAGATTGGAGGGAAGAGAGGAGGCGGGGACCCTGGTGGGAGGCGATGCATTAAAAGTAGGGCTGTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19144918 86 - 19675229 GATA-CGCTGAAGGAGACCCGCAGATTGGAGGGAAGAGAGGAGGCGGGGACCCTGGTGGGAGGCGATGCATTAAAAGTAGGGCTGTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16381695 86 - 16847902 GATG-CGCTGAAGGAGACCCGCAGATTGGAGGGAAGAGAGGAGGCGGGGACCCTGGTGGGAGGCGATGCATTAAAAGTAGGGCTGTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91352069 86 + 91754291 GATA-CGCTGAAGGAGACCCGCAGATTGGAGGGAAGAGAGGAGGCGGGGACCCTGGTGGGAGGCGGTGCATTAAAAGTAGGGCTGTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1418306 86 + 1977891 GATA-CGCTGAAGGAGACCCGCAGATTGGAGGGAAGAGAGGAGGCGGGGACCCTGATGGGAGGCGATGCATTAAAAGTAGGGCTGTC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73831700 87 + 74750902 GCTACCGCTGAAGGAGCCCTGCAGATTGGAGAGAAAAGAGGAGGTGGGGAGCCTGGTGGGAGAGGATACATGAAAAGTTGGGCTTTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17277944 87 - 17725628 GCTACCACTGAAGAAGCCCTGCAGATTGGAGAGAAGAGAGGAGGTGGGGACCCTGGTGGGAGAGGATACATGAAAAGAAGGGCTTTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6367345 87 + 6778120 GCTACCGCTGAAGGAGCCCTGCAGATTGGAGAGAAAAGAGGAGGTGGGGACCCTGGTGGGAGAGGATACATGAAAAGTAGGGCTTTC i cebCap1.NW_016107444v1 C 0 C 0 s dasNov3.JH569502 2694406 68 - 6579706 ------GCTACA------------ATTGAAGGAAAGTCACCAAGTGGGGGCACTGGTGGGAAAGGAAGCATTAAAA-TAGGGTTGTC i dasNov3.JH569502 C 0 I 1738 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e canFam3.chr33 2315847 669 - 31377067 I e otoGar3.GL873829 202132 0 + 608964 C e colAng1.NW_012118932v1 7357164 1504 - 7796314 I a score=136210.000000 s hg38.chr3_KI270934v1_alt 55172 18 + 163458 TGggccaggtgtggtggc s panTro5.chr3 2527354 18 - 202621043 TGGCccaggtgtggtggc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117497 18 - 190779 TGGCccaggtgtggtggc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 68443 18 - 106623 TGggccaggtgtggtggc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2843794 18 - 123690457 TGggccaggtgcggtggc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2340563 18 - 204787373 TGggccaggtgcggtggc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192405728 18 - 192460366 TGggccaggtgcggtggc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19145004 18 - 19675229 TGggccaggtgcggtggc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16381781 18 - 16847902 TGggccaggtgcggtggc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91352155 18 + 91754291 TGggccaggtgcggtggc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1418392 18 + 1977891 TGggccaggtgcggtggc i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73831787 18 + 74750902 TAggccaggcatggtggc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17278031 18 - 17725628 CGggccaggcgaggtggc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6367432 18 + 6778120 TGggccaggcatggtggc i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2694474 1738 - 6579706 I e canFam3.chr33 2315847 669 - 31377067 I e otoGar3.GL873829 202132 0 + 608964 C e colAng1.NW_012118932v1 7357164 1504 - 7796314 I a score=197999.000000 s hg38.chr3_KI270934v1_alt 55190 23 + 163458 tcacacctgtaatcccagcactt s panTro5.chr3 2527372 23 - 202621043 tcacacctataatcccagcactt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117515 23 - 190779 tcacacctataatcccagcactt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 68461 23 - 106623 tcacacctataatcccagcactt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2843812 23 - 123690457 tcacacctataatcccagcactt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2340581 23 - 204787373 tcacgcctataatcccagcactt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192405746 23 - 192460366 tcacgcctataatcccagcactt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19145022 23 - 19675229 tcacgcctataatcccagcactt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16381799 23 - 16847902 tcacgcctataatcccagcactt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91352173 23 + 91754291 tcacgcctataatcccagcactt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1418410 23 + 1977891 tcacgcctgtaatcccagcactt i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73831805 23 + 74750902 tcacgcctataatcccagcactt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17278049 23 - 17725628 tcacgcctgtaatcccagcactt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6367450 23 + 6778120 tcatgcctgtaatcccagcactt i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 202132 23 + 608964 TCACACCAGTGTCCCCATCTCCT i otoGar3.GL873829 C 0 I 46 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2694474 1738 - 6579706 I e canFam3.chr33 2315847 669 - 31377067 I e colAng1.NW_012118932v1 7357164 1504 - 7796314 I a score=1804804.000000 s hg38.chr3_KI270934v1_alt 55213 265 + 163458 tgggaggccgaggcaggcaagtcacctgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccctgtttctaccaaaaatataacaaattagctgggcgtggtggcgcacacctgtaatcccagctacttgggaggctgagacaggagaatcccttgaaaccaggaggcggagcttgcagtgagccgagatggcaccactgcactccagcctgggtgacagagtgagactgggtctc-aataataataataataataat s panTro5.chr3 2527395 265 - 202621043 tgggaggccgaggcaggcaagtcacctgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccctgtttctaccaaaaatataacaaattagctgggcgtggtggcgcacacctgtaatcccagctacttgggaggctgagacaggagaatcccttgaaaccaggaggcggagcttgcagtgagccgagatggcaccactgcactccagcctgggtgacagagtgagactcggtctc-aataataataataataataat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117538 265 - 190779 tgggaggccgaggcaggcaagtcacctgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccctgtttgtaccaaaaatataacaaattagctgggcgtggtggcgcacacctgtaatcccagctacttgggaggctgagacaggagaatcccttgaaaccaggaggcggagcttgcagtgagccgagatggcaccactgcactccagcctgggtgacagagtgagactcggtctc-aataataataataataataat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 68484 265 - 106623 tgggaggccgaggcaggcaagtcacctgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccctgtttctaccaaaaatataacaaattagctgggcgtggtggcacacacctgtaatcccagctacttgggaggctgagacaggagaatcccttgaaaccaggaggcggagcttgcagtgagccgagatggcaccactgcactccagcctgggtgacagagcgagactcggtctc-aataataataataataataat i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2843835 265 - 123690457 tgggaggccgaggcaggcaggtcacctgaggccaggagttcaagaccagcctgaccaacatggtgaaaccccgtttctaccaaaaatataaaaaattagctgggcgtggtggcacatacctgtaatcccagctacttgggaggctgagacaggagaatcccttgaaaccgggaggcggagcttgcagtgagctgagatggcaccactgcactccagcctgggcgacagagcgagactcggtctt-aataataataataataataat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2340604 265 - 204787373 tgggaggctgaggcaggcggatcaccagaggtcaggagttcaagaccagcctgaccaacatggtgaaaccctgtctctaccaaaaatataaaaaattagctgggcttggtggcacacacctgtaatcccagctactcgggaggctgagacaggagactcccttgaacccaggaggtgatggttgcaatgagcccagttggcaccactgtgctccagcctgggagacagagcgagactcggtctc-aaataaaatacaaacaaaaat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192405769 265 - 192460366 tgggaggccgaggcaggcggatcaccagaggtcaggagttcaagaccagcctgaccaacatggtgaaaccctgtctctaccaaaaatataaaaaattagctgggcttggtggcacacacctgtaatcccagctactcgggaggctgagacaggagactcccttgaacccaggaggtgatggttgcaatgagcccagttggcaccactgcgctccagcctgggagacagagcgagactccgtctc-aaataaaatacaaacaaaaat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19145045 265 - 19675229 tgggaggccgaggcaggcggatcaccagaggtcaggagttcaagaccagcctgaccaacatggtgaaaccctgtctctaccaaaaatataaaaaattagctgggcttggtggcacacacctgtaatcccagctactcgggaggctgagacaggagactcccttgaacccaggaggtgatggttgcaatgagcccagttggcaccactgcgctccagcctgggagacagagcgagactcggtctc-aaataaaatacaaacaaaaat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16381822 265 - 16847902 tgggaggccgaggcaggcggatcaccagaggtcaggagttcaagaccagcctgaccaacatggggaaaccctgtctccaccaaaaatataaaaaattagcggggcttggtggcacacacctgtaatccgagctactcgggtggctgagacaggagactcccttgaacccaggaggcgatggttgcaatgagccgagttggcaccactgcactccagcctgggtgacagagcgagactcagtctc-aaataaaataaaaacaaaaat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91352196 265 + 91754291 tgggaggctgaggcaggcggatcaccagaggtcaggagttcaagaccagcctgaccaacatggtgaaaccctgtctctaccaaaaatataaaaaattagctgggcgtggtggcacacacctgtaatcccagctactcgggaggctgagacaggagactcccttgaacctcggaggctatggttgcaatgagccaagttggcaccactgcactccagcctgggcaacagagcgagactcagtctc-aaataaaataaaaacaaaaat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1418433 265 + 1977891 tgggaggccgaggcaggcgaatcaccagagatcaggagttcaagaccagcctgaccaacatggtgaaaccctgtctctaccaaaaatataaaaaattagctgggcctggtggcacacacctgtaatccgagctacttgggaggctgagacacgagactcccttgaacctgggaggcgatggttgcaatgagccgtgttggcaccactgcactccagcctgggcgacagagcgagactcagtctc-aaataaaataaaaacaaaaat i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73831828 259 + 74750902 tgggagaccgaggcaggtggatcacctgaagtcaggagtttgagaccagcctgaccagcacgatgaaaccccatctctaccaaaaatataaaaaactagccaggggtggtgacgcacgcctgtagtcccagctactcaggaggttgagtcaggagggtcccttgaacctgggaggcagaggttgcagtgagccaagatggtgccactacactccagcctgggcgacagagtgagactccggcttaaaaaaaaataa-------act i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17278072 235 - 17725628 tgggagaccgaggcaggt-------------------gtttgagaccagactgaccaacatggtgaaaccccatctccaccaaaaatataaaaaattagccaggggtggtggcgcatgcctgtagtcccagccactcaggcggctgagacaggagaatcccttgaccccgggaggcagaggttgcagtgagccgagatggtgccactacactccagcctgggcg--agagtgagactccgtc---aaaaaaaataa-------aCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6367473 258 + 6778120 tgggagaccgaggcaggtggatcacctgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctccactgaaaatataaaaaattagccaggggtggtggcgcacgcttgtagtcccagctactcaggacgctgagacaggagaatcccttgaacccgggaggcggaggttgcagtgagctgagatggcgccactacactccagccagggcgacagagcgagacttcatctc-aaaaaaaataa-------act i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2694474 1738 - 6579706 I e canFam3.chr33 2315847 669 - 31377067 I e otoGar3.GL873829 202155 46 + 608964 I e colAng1.NW_012118932v1 7357164 1504 - 7796314 I a score=799594.000000 s hg38.chr3_KI270934v1_alt 55478 107 + 163458 aat----------gaaaGtagggctgtccaatttagcaaatgaaaatacaagcagcccagc-----ttaaatttcagattaaccacaaataattgttttagtttaaagatatcccatgaact s panTro5.chr3 2527660 104 - 202621043 -------------gaaaGtagggctgtccaatttagcaaatgaaaatacaagcagcccagt-----ttaaatttcagattaaccacaaataattgttttagtttaaagatatcccctgaact i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117803 107 - 190779 aat----------gaaaGtagggctgtccaatttagcaaatgaaaatacaagcagcccagt-----ttaaatttcagattaaccacagataattgttttagtttaaagatatcccctgaact i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 68749 99 - 106623 -------------gaaaGtagggctgtccaatttagcaaatgaaaatacaagaagcccagc-----ttaaatttcagattaaccacaaataattgt-----tttaaagatatcccatgaact i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2844100 117 - 123690457 aacaataataataaAAAGtagggctgtccaatttagcaaatgaaaatacaagaagccaagc-----ttaaatttcagattaaccacaaataattgttttagtttaaagatatctcatgaact i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2340869 107 - 204787373 aat----------aaaaGtagggctgtccgatttagcaaatgaaaatgtaggaagctcagc-----ttaaatttcggattaaccacaaataattgttttagtgtaaagacatcccatgaact i rheMac8.chr2 C 0 I 183 s macFas5.chr2 192406034 107 - 192460366 aat----------aaaaGtagggctgtccgatttagcaaatgaaaatgtaggaagctcagc-----ttaaatttcagattaaccacaaataattgttttagtgtaaagacatcccatgaact i macFas5.chr2 C 0 I 183 s macNem1.NW_012014355v1 19145310 107 - 19675229 aat----------aaaaGtagggctgtccgatttagcaaatgaaaatgtaggaagctcagc-----ttaaatttcagattaaccacaaataattgttttagtgtaaagacatcccatgaact i macNem1.NW_012014355v1 C 0 I 180 s cerAty1.NW_012004056v1 16382087 107 - 16847902 aat----------aaaaGtagggctgtccgattcagcaaatgaaaatgtaggaagctcagc-----ttaaatttcagattaaccacaaataattgttttagtttaaagatatcccatgaact i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91352461 107 + 91754291 aat----------aaaaGtagggctgtccgatttagcaaatgaaaatatgggaagctcagc-----ttaaatttcagattaaccacaaataatcgttttagtttaaagatatcccatgaact i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1418698 107 + 1977891 aat----------aaaaGtagggctgtccgattcagcaaatgaaaatgtaggaagctcagc-----ttaaatttcagattaaccacaaataactgttttagtttaaaggtatcccatgaact i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73832087 106 + 74750902 aat----------aaaaGtaaggctgtctgattcagcaaatgaaaatacagg-aggccagc-----ttaaatttcagattaaccacaaataactggtttagtataaagacatcccatgaacc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17278307 107 - 17725628 CAT----------AAAAGtaaggctgtctgatttagtaaatgaaaatacaggaaggccagc-----ttaaatttcagatgaatcacaaataattggtttactataaagatatcccatgaacc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6367731 107 + 6778120 aat----------aaaaGtaagtctgtctgatttagcagatgaaaatacaggaaggccagc-----ttaaatttcagattaatcacaaataattggtttactataaagatatcccatgaacc i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 202201 103 + 608964 ATT----------AAAAGtagggttgtcggatttagc-----aagatataagatgcccagttaaaattaaattttacataaaccacaa--aatttttttagcataaggatgtcccatgaa-- i otoGar3.GL873829 I 46 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2694474 1738 - 6579706 I e canFam3.chr33 2315847 669 - 31377067 I e colAng1.NW_012118932v1 7357164 1504 - 7796314 I a score=1361502.000000 s hg38.chr3_KI270934v1_alt 55585 179 + 163458 atttggaacattcttgtatatttttaagtgttcaccgtttatccgaggttctcatttaagtggctgttctgtgttttCT-TGGTGAGCCCAGTCAAAGCCGCTGAGGCCCTGACAGCACGGGAGGAGGAGGCGTCCC-AAGAAAGGAGAGGGCACCTGGG-GACACCCTTCTCTAGCTGGAC s panTro5.chr3 2527764 179 - 202621043 atttggaacattcttgtatatttttaagtgttcaccgtttatctgaggttctcatttaagtggatgtcctgtgttttCT-TGGTGAGCCCAGTCAAAGCCGCTGAGGCCCTGACAGCACGGGAGGAGGAGGCGTCCC-GAGAAAGGAGAGGGCACCTGGG-GACACCCTTCTCTAGCTGGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117910 179 - 190779 atttggaacattcttgtatatttttaagtgttcaccgtttatctgaggttctcatttaagtggatgtcctgtgttttCT-TGGTGAGCCCAGTCAAAGCCGCTGAGGCCCTGACAGCACGGGAGGAGGAGGCGTCCC-GAGAAAGGAGAGGGCACCTGGG-GACACCCTTCTCTAGCTGGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 68848 179 - 106623 atttggaacattcttgtatatttttaagtgttcaccgtttatccgaggttctcatttaagtggatgtcctgtgttttCT-TGGTGAGCCCAGTCAAAGCCTCTGAGGCCCTGACAGCACGGGAGGAGGAGGCGTCCC-AAGAAAGGAGAGGGCACCTGGG-GACACCCTTCTCTAGCTGGAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2844217 178 - 123690457 atctggaacattcttgtctatttttaagtgttcatcatttatctgaggttctaatttaactgggcgtcctgtgttttCT-TGTTGAGCCCAGTCAAAGCCGCTGAGGCCCTGACTGCATGGGCGGAGGAGGCGT-CC-GGGAAAGGAGAAGGCACCTGGG-GACACCCTTCTCTAGCTGGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2341159 174 - 204787373 atttGGAACATTCTTGTATATTTTTaagtgttcatcgtttatctgaggttctcatttaactggacgtcctgtgttttCT-TGGTGAGCCCAGTCAAAGCCACTGAGGCCCTGACTGCATGGGAGGAAGAGGCGTCCC-AAGAAAGGAGAGGGCACCTGGG-GACACCCTTCTCTAGC----- i rheMac8.chr2 I 183 C 0 s macFas5.chr2 192406324 174 - 192460366 atttGGAACATTCTTGTATATTTTTaagtgttcatcgtttatctgaggttctcatttaactggacgtcctgtgttttCT-TGGTGAGCCCAGTCAAAGCCACTGAGGCCCTGACTGCATGGGAGGAAGAGGCGTCCC-AAGAAAGGAGAGGGCACCTGGG-GACACCCTTCTCTAGC----- i macFas5.chr2 I 183 C 0 s macNem1.NW_012014355v1 19145597 174 - 19675229 atttGGAACATTCTTGTATATTTTTaagtgttcatcgtttatctgaggttctcatttaactggacgtcctgtgttttCT-TGGTGAGCCCAGTCAAAGCCACTGAGGCCCTGACTGCATGGGAGGAAGAGGCATCCC-AAGAAAGGAGAGGGCACCTGGG-GACACCCTTCTCTAGC----- i macNem1.NW_012014355v1 I 180 C 0 s cerAty1.NW_012004056v1 16382194 174 - 16847902 atttggaacattcttgtatatttttaagtgttcatcgtttatctgaggttctcatttaacaggacatcctgtgttttCT-TGGTGAGCCCAGTCAAAACCACTGAAGCCCTGACTGCATGGGAGGAAGAGGCGTCCC-AGGAAAAGAGAGGGCACCTGGG-GACACCCTTCTCTAGC----- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91352568 174 + 91754291 atttggaacattcttgtatatttttaagtgttcatcgtttatctgaggttctcattgaactggacatcttgggttttCT-TGGTGAGCCCAGTCAAAGCCACTGAGGCCCTGACTGCATGGGAGGAAGGGGCGTCCC-AGGAAAGGAGAGGGCACCTGGG-GACACCCTTCTCTAGC----- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1418805 174 + 1977891 atttggaacattcttgtatatttttaagtgttcatcgtttatctgaggttctcatttaactggacatcctgtgttttCT-TGGTGAGCCCAGTCAAAGGCACTGAGGCCCTGACTGCATGGGAGGAAGAGGCATCCC-AGGAAAAGAGAGGGCACCTGGG-GACACCCTTCTCTAGC----- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73832193 177 + 74750902 atttcggacgttcctg--tgtttttaagtgtccgtcatttatccaaggttctaatttaactggacgtcctgtgttttct-tggtgaacccAGTCAAAGCTGCTGAGGCCCTGACTGTGAGGGAGGAGGAGACATCAC-AGGAAGGGAGAGGGCACCGGGG-AACACCCTCCTCTAGCTGGAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17278414 176 - 17725628 attt-ggacattcttg--tgtttttaagtgttcgtcatttatccaaggttctaatttaactggacgtcctctgttttCT-TGGTGAGCCCAGTCAAAGCTACTGAGGCCCTGACTGCGAGGGAGGAAGAGACGTCAC-AGGAAAGGAGAGGGCGCCTGGG-GACACCCTTCTCTAGCTGCAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6367838 176 + 6778120 attttggacattcttg--tgtttttaagtgttcatcatttatccaaggctctaatttaactggacaccctgtgttttCT-TGGTGAGCCCAGTCAAAGCTACTGAGGCCCTGACTGCGAGGGAGGAGGAGGCGTCAC-GGGAAAGGAGA-GGCACCTGGG-GACACCCTTCTCTAGCTGGAC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 202304 166 + 608964 attt----------------ttttaaagtattcattgttcatctgaaattctaatttaactggatgtcctgtattttatctggtgatcctaGTCAAAACAGCTAAGGCGTTGACAGTATAGGAAAAGGAGGTGTCATGAAGAAGGAAGATGGCAGATGGGTGACACCCTTCTCTGGCTGGGC i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2694474 1738 - 6579706 I e canFam3.chr33 2315847 669 - 31377067 I e colAng1.NW_012118932v1 7357164 1504 - 7796314 I a score=230846.000000 s hg38.chr3_KI270934v1_alt 55764 31 + 163458 AGGGAGCTGCCCCTTCACGAGTGGGACAGTC s panTro5.chr3 2527943 31 - 202621043 AGGGAGTTGCCCCTTCACGAGTGGGACAGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 118089 31 - 190779 AGGGAGTTGCCCCTTCACGAGTGGGACAGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 69027 30 - 106623 A-GGAGCTGCCCCTTCACGAGTGGGACAGTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2844395 31 - 123690457 AGGGAGATGCCCCTTCACAAGTGGGACAGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2341333 24 - 204787373 -------TGCCCCTTCATGAGTGGGACAGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192406498 24 - 192460366 -------TGCCCCTTCATGAGTGGGACAGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19145771 24 - 19675229 -------TGCCCCTTCATGAGTGGGACAGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16382368 24 - 16847902 -------TGCCCCTTCATGAGTGGGACAGTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91352742 24 + 91754291 -------TGCCCCTTCATGAGTGGGACAGTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1418979 24 + 1977891 -------TGCCCCTTCATGAGTGGGACAGTT i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73832370 31 + 74750902 AGGGAGCTGCCCCTTCATGAGTGGGACAGTT i calJac3.chr17 C 0 I 316 s saiBol1.JH378146 17278590 31 - 17725628 AGGGAGCTGCCCCTTCATGAGTGGGACAGTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6368014 31 + 6778120 AGGGAGCTGCCCCTTCATGAGTGGGACAGTT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 202470 30 + 608964 AGGAGGGTGTCCCTT-ATGAGTGATGCAGTT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2316516 31 - 31377067 AAGGAAAGGCCTCTTGGTGAGTGGTGCAGTC i canFam3.chr33 I 669 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2694474 1738 - 6579706 I e colAng1.NW_012118932v1 7357164 1504 - 7796314 I a score=2861398.000000 s hg38.chr3_KI270934v1_alt 55795 345 + 163458 AGAAGGACAAGGACACAACCATCCATTTTCGTCAGCTCATTCCCTGGCTACAAGTGGTCTGGATTCTGTCGCTTTGGCCCCTGGAATAAAATAACTGACTGACCCT--------TCCCCA---GGGTGCCAGGTGTGAGTTTGCTTGGAAGAGAGAAGGGTGCAGAC-CCCCGACCCCTG------CTGGTGGCA-GCAGCTGGGACACCTTCAGTGGGCTCGAG--AGTGGCAAAAGGAGCTATCTGGGGCAAAGCTTGGCCAAAGACACAGACTCCCTTGCCCATTCTTCCCTGCT-TCAAAGGAGCCTTCCAGAAACTCCCCACAGGCCTGAAGTAAGTGGC--TTAATGACTGGGATGATGAGTG s panTro5.chr3 2527974 348 - 202621043 AGAAGGACAAGGACACAACCATCCATTTTCGTCAGCTCATTCCCTTGCTACAAGTGGTCTGGATTCTGTCGCTTTGGCCCCTGGAATAAAATAACTGACTGACCCT--------TCCCCATGGGGGTGCCAGGTGTGAGTTTGCTTGGAAGAGAGAAGGGTGCAGAC-CCCCGACCTCTG------CTGGTGGCA-GCAGCTGGGACACCTTCAGTGGGCTCGAG--AGTGGCAAAGGGAGCTATCTGGGGCAAAGCTTGGCCAAAGACACAGACTCCCTTGCCCATTCTTCCCTGCT-TCAAAGGAGCCTTCCAGAAACTCCCCACAGGCCTGAAGTAAGTGGC--TTAATGACTGGGATGATGAGTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 118120 348 - 190779 AGAAGGACAAGGACACAACCATCCATTTTCGTCAGCTCATTCCCTTGCTACAAGTGGTCTGGATTCTGTCGCTTTGGCCCCTGGAATAAAATAACTGACTGACCCT--------TCCCCATGGGGGTGCCAGGTGTGAGTTTGCTTGGAAGAGAGAAGGGTGCAGAC-CCCCGACCCCTG------CTGGTGGCA-GCAGCTGGGACACCTTCAGTGGGCTCGAG--AGTGGCAAAGGGAGCTATCTGGGGCAAAGCTTGGCCAAAGACACAGACTCCCTTGCCCATTCTTCCCTGCT-TCAAAGGAGCCTTCCAGAAACTCCCCACAGGCCTGAAGTAAGTGGC--TTAATGACTGGGATGATGAGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 69057 345 - 106623 AGAAGGACAAGGACACAACCATCCATTTTCATCAGCTCATTCCCTGGCTGCAAGTGGTCTGGATTCTGTCGCTTCGGCCCCTGGAATAAAATAACTGACTGACCCT--------TCCCCA---GGGTGCCAGGTGTGAGTTTGCTTGGAAGAGAGAAGGCTGCAGAC-CCCCGGCCCCTG------CTGGTGGCA-GCAGCTGGGACACCTTCAGTGGGCTCGAG--AGTGGCAAAGGGAGCTATCTGGGGCAAAGCTTGGCCAAAGACACAGACTCCCTTGCCCATTCTTCCCTGCT-TCAAAGGAGCCTTCCAGAAACTCCCCACAGGCCTGAAGTAAGTGGC--TTAATGACTGGGACGAGGAGTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2844426 353 - 123690457 AGAAGGACAAGGACACAACCATCCATTTTCGTCAGCTCATTCCCTGGCTACAGGTGGTCTGGATTCTGTCGCTTTGGCCCCTGGAATAAAATAACAGACTGACCCTTAGCAAACTTCCCA---GGGTGCCAGGTGTGAGTTTGCTTGGAAGAGAGAAGGGCGCAGAC-CCCCATCCCCTG------CAGGTGGCA-GCAGCTGGGACACCTTCAGTGGGCTCGGG--AGTGGCAAAGGGAGCTATCTGGGGTGAAGCTTGGCCAAAGACACAGACTCCCTTGTGCATTCTTCCCTGCT-TCAAAGGAGCCTTCCAGAAACTCCCCGTAGGCCTGAAGTAAGTGGC--TTAATGACTAGGATGATGAGTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2341357 346 - 204787373 AGAAGGACAAGAACACAACCATCCATTTTCGTCAGCTCATTCCCTGGCTCCGAGTGGTCTGAATTCTGTCGCTTTGGCCCCTGGAATAAAAGAACTGACTGACCCT--------TCCCCG---GGGTGCCAGGTGTGATTTTGCTTGGAAGAAATAAGGGCGCAGAC-CCCCGTCCCCTG------CTGGTGGCAGGCAGCCGGGACACCTTCAGTGGGCTCGGG--AGTGGCAAAGGGAGCTCTCTGGGGCAAAGCTTGGCTAAAGACACAGACTCCCTTGCCCATTCTTCCCTGCT-TCAAAGGAGCCTTCCAGAAACTCCCTGCAGGCCTGAAGTAAGTGGC--TTAATGACTAGGATAATGAGTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192406522 346 - 192460366 AGAAGGACAAGAACACAACCATCCATTTTCGTCAGCTCATTCCCTGGCTCCGAGTGGTCTGAATTCTGTCGCTTTGGCCCCTGGAATAAAAGAACTGACTGACCCT--------TCCCCG---GGGTGCCAGGTGTGAGTTTGCTTGGAAGAAATAAGGGCGCAGAC-CCCCGTCCCCTG------CTGGTGGCAGGCAGCCGGGACACCTTCAGTGGGCTCGGG--AGTGGCAAAGGGAGCTCTCTGGGGCAAAGCTTGGCTAAAGACACAGACTCCCTTGCCCATTCTTCCCTGCT-TCAAAGGAGCCTTCCAGAAACTCCCCGCAGGCCTGAAGTAAGTGGC--TTAATGACTAGGATAATGAGTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19145795 346 - 19675229 AGAAGGACAAGAACACAACCATCCATTTTCGTCAGCTCATTCCCTGGCTCCGAGTGGTCTGAATTCTGTCGCTTTGGCCCCTGGAATAAAAGAACTGACTGACCCT--------TCCCCG---GGGTGCCAGGTGTGAGTTTGCTTGGAAGAAATAAGGGCGCAGAC-CCCCGTCCCCTG------CTGGTGGCAGGCAGCCGGGACACCTTCAGTGGGCTCGGG--AGTGGCAAAGGGAGCTCTCTGGGGCAAAGCTTGGCTAAAGACACAGACTCCCTTGCCCATTCTTCCCTGCT-TCAAAGGAGCCTTCCAGAAACTCCCTGCAGGCCTGAAGTAAGTGGC--TTAATGACTAGGATAATGAGTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16382392 342 - 16847902 ----GGACAAGGACACAACCATCCATTTTCCTCAGCTCATTCCCTGGCTCCGAGTGGTCTGAATTCTGTCGCTTTGGCCCCTGGAATAAAAGAACTGACTGACCCT--------TCCCCG---GGGTGCCAGGTGTGAGTTTGCTTGGAAGAAATAAGGGTGCAGAC-CCCCGTCCCCTG------CTGGTGGCAGGCAGCCGGGACACCTTCAGTGGGCTCGGG--AGTGGCAAAGGGAGCTATCTGGGGCAAAGCTTGGCTAAAGACACAGACTCCCTTGCCCATTCTTCCCTGCT-TCAAAGGAGCCTTCCAGAAACTCCCCGCAGGCCTGAAGTAAGTGGC--TTAACGACTAGGATAATGAGTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91352766 345 + 91754291 AGAAGGACAAGGACACAACCATCCATTTTCGTCAGCTCATTCCCTGGCTCCGAGTGGTCTGAATTCTGTCGCTTTGGCCCCTGGAATAAAAGAACTGACTGACCCT--------TCCCCG---GGGTGCCAGGTGTGAGTTTGCTTGGAAGAAATAAGGGTGCAGAC-CCCCGTCCCCTG------CTGGTGGCAGGCAGCCGGGACACCTTCAGTGGACTCGGG--AGTGGCAAAGGGAGCTATCTAGGGCAAAGCTTGGCCAAAGACACAGACTCCCTTGCCCATTCTTCCCTGCT-TCAAAGAAGCCTTCCAGAAACTCCCCGTAGG-CTGAAGTAAGTGGC--TTAATGACTAGGATAATAGGTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1419003 346 + 1977891 AGAAGGACAAGGACACAACCATCCATTTTCATCAGCTCATTCCCTGGCTCCGAGTGGTCTGAATTCTGTCGCTTTGGCCCCTGGAATAAAAGAACTGACTGACCCT--------TCCCCG---GGGTGCCAGGTGTGAGTTTGCTTGGAAGAAATAAGGGTGCAGAC-CCCCGTCCCCTG------CTGGTGGCAGGCAGCCGGGACACCTTCAGTGGGCTCGGG--AGTGGCAAAGGGAGCTATCTGGGGCAAAGCTTGGCTAAAGACACAGACTCCCTTGCCCATTCTTCCCTGCT-TCAAAGGAGCCTTCCAGAAACTCCCCGCAGGCCTGAAGTAAATGGC--TTAATGACTAGGATAATAAGTA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73832717 342 + 74750902 agaaGGACATGGGCACAACCATGCGTTTTCCTCAGCATACTCCCTGGTTCTGAGTGCTCTGGATTCTGTCACTTTGG-GCCTGGAATGAAAGAACTGACTGGCTCT--------TCTCCA---GGGTGCCAGGCATGAGTTTGCTTGGCAGAGAGAAGAGCGCGGAC-CCCTGTCTCCTGCTCTTCCTGGTGGCAGGCAGCTGGAACACCTTCAGTGGGCTCAGC--AGTG---------GCCATCTGGGACAAAGCGCGACCAGAGACACAAATTCCCTTGCCCCTTCTTCCCTGCTCTTGAAGGAGCCTTCCAGAAATTCCCCACAGG-CTGAAGTCAGGGGC--TTAATGACCAGGATGATGAGTA i calJac3.chr17 I 316 C 0 s saiBol1.JH378146 17278621 339 - 17725628 -AGAGGACAAGGGTGC-ACCACGCGTCTTCCTCAGCTTACTCCCTGGCTCTGAGTGGTCTGGGTTCTGTCCCTTTGG-GCCTGGAATAAAAGAACTGACCAGCTCT--------TCTCCA---GGGTGCCAGGTATGAGTCTACTTGGCAGAGAGAAGGACGCAGAC-CCCTGTCCCCTG------CTGGTGGCAGGCAGCTGGAACACCTTCAGTGGGCTCAGG--AGTGGCAAAGGGAGCTATCTGGGACAAAGCTTGGCCAGAGACAGAGATTCCCCTGCCCATTCTTCCCTGCTCTTGAAGGAGCCTTTCAGAAACTCCCCGCCGGCCTGAAGTAAG-------TGATGACCAGGATGATGGGTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6368045 345 + 6778120 CGAAGGACAAGTTCGCAACCGTGCGTTTTCCTCAGCTTACTCCCTGGCTCTGAGTGGTCTGGATTCTGTCACTTTGA-GCCTGGAATAAAATAACTGACCAACTCT--------ACTCCA---GGGTGCCAGGCATGAGTTTGCTTGGCAGGGAGAAGGGTGCAGAC-CCCTGTCCCCTG------CTGGTGGCAGGCAGCTGGAACACCTTCAGT-GGCTCAGG--AGTGGCAAAGGGAGCTATCTGGGACAAAGTTTGGCCAGAGACACAGATTCCCTTGCTCATTCTTCCCTGCTCTGGAAGGAGCCTTCCAGAAACTCCCCACAGGCCTGAAGTAAGCGGC--TTCATGACCAGGATGATGAGTG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 202500 341 + 608964 ---AGATAAAGGACATAACTGCACATTTTCATCAGCTCAGTCCCTTGCTCTGTATGGTTTGGATTCTGCCACTTTGGCACCTGGAAT-AAATAGCTAACTGGCCCT--------GCCCCA---GGGTGCCAGGTGTGAGTTTTCTGGGCAGAGAAAAGGGAGCAGGC-CCTCATCCCCTA------CTAGTGGCA-GCAGGTGAGACACCTTTGGTGGACACTGG--GGAGGCCAAC-GAGCTGTCTGGGACAATACTTAGCCATAGACACAGATTCCCTGGTGCATTCTTCCCTGCTCTCAAAGGAGCCTTCCAGAAACTCCCTGTGGGTCTTAGGTAAGGAGC--TTAATGACCAGAATGACAAATA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2316547 296 - 31377067 AGA----------------------------TCAGCCCACCCGCCGAATCTGTGTGATGTGGATTCTGCTGCTTATGCACCTAGAAT-GAAGAACTGATGGACCCT--------TCTTCA---GGGTTCCAGGCCCGTGTTAGCCTGGCAGAGGGGGAGAAGCCTCCACCCCATTCCCAG------TTGGT-GCAGGCAGTTGAAACACCCTCAGTGGGCCCGGGGCACCCTTAAAGGGAGCTGTCTGG----------------AGACA----------TGCTTATACTTCCCTGTTCTCCAAGGAACCTTCCAGAAAATCCCCATGAGCTTAAGATGAGCAGCTTTTAAAGACCAAGATAGCAAACA i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2694474 1738 - 6579706 I e colAng1.NW_012118932v1 7357164 1504 - 7796314 I a score=922767.000000 s hg38.chr3_KI270934v1_alt 56140 106 + 163458 ATAGGTCACTGGCATGATGCACCCCTTTACGCATTTACTGGCACCAGAAAGTGAT-ATCATGGCCACT-ATTAAAGTGTGGGGCGCACCCACGGAATTCGTTTCCATT s panTro5.chr3 2528322 106 - 202621043 ACAGGTCACTGGCATGATGCACCCCTTTACGCATTTACTGGCACCAGAAAGTGAT-ACGATGGCCACT-ATTAAAGTGTGGGGCGCACCCACGGAATTCGTTTCCATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 118468 106 - 190779 ACAGGTCACTGGCATGATGCACCCCTTTACGCATTTACTGGCACCAGAAAGTGAT-ACGATGGCCACT-ATTAAAGTGTGGGGCGCACCCACGGAATTCGTTTCCATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 69402 107 - 106623 ATAGGTCACTGGCATGATACACCCCTTTACGCATTTACTGGCACCAGAAAGTGATAATGATGCCCGCT-ATTAAAGTGTGGGGCACACCCATGGAATTCGTTTCCATT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2844779 106 - 123690457 ATAGGTCACTGGCATGATATACCCCTTTACGCATTTATTGGCACCAGAAAGTGAT-ATGATGCCCACG-ATTAAAGTGTGGGGCACACCCATGGAATTTGTTTCCATT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2341703 107 - 204787373 ACAGGTAACTGGCATGATACACACCTTTACGCATTTATTGGCACCAGAAAGTGAC-ATGCTGTCCACTCATTAAAGTGTGGGGCACACCCATGGAATTTGTTTCCATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192406868 107 - 192460366 ACAGGTAACTGGCATGATACACACCTTTACGCATTTATTGGCACCAGAAAGTGAC-ATGCTGTCCACTCATTAAAGTGTGGGGCACACCCATGGAATTTGTTTCCATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19146141 105 - 19675229 ACAGGTAACTGGCATGATACACACCTTT--GCATTTATTGGCACCAGAAAGTGAC-ATGCTGTCCACTCATTAAAGTGTGGGGCACACCCATGGAATTTGTTTCCATT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16382734 107 - 16847902 ACAGGTAACTGGCATGATACACACCTTTACGCACTTATTGGCACCAGAAAGTGAC-ATGCTGTCCACTCATTAAAGTGTGGGGCACACCCATGGAACTTGTTTCCATT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91353111 107 + 91754291 ATAGGTAATTGGCATGACACACACCTTTACACATTTATTGGCACCAGAAAGTGAC-ATGCTGCCCACACATTAAAGTGTGGGGCACACCCATGGAATTTGTTCCCTTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1419349 107 + 1977891 ACAGGTAACTGGCATGATACACACCTTTACGCATTTATTGGCACCAGAAAGTGAC-ATGCTATCCACTCATTAAAGTGTGGGGCACACCCATGGAATTTGTTTCCATT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7358668 107 - 7796314 ATAGGTAACTGGCATGATACACACCTTTATGCATTTATTGGCACCAGAAAGTGAC-ATGCTGCCCACTCATTAAAGTGTGGGGCACATCCATGGAATTTGTTTCCATT i colAng1.NW_012118932v1 I 1504 C 0 s calJac3.chr17 73833059 107 + 74750902 ATAGGTAACTGGCGTGATATGCCCCTTCAAGCATTTACTGGCACCAGAAAGTGGT-GTGCCGCCCACTCATGAAGGTATGGGGCGTGCCCATGGAATGTACGTCCATT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17278960 107 - 17725628 ATAGATAACTGGCATGATATGCCCCTTTAAGCATTTACTGGCCCCAGAAGGTGGT-ATGCTGCCCACTCATGAAGGTGCGGGGCATGCCCATGGAATTGGCGTCCATT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6368390 107 + 6778120 ATAGGTAACTGGCATGATGTGCCCCTTTAGGCACTTACTGGGACCAGAAAGTGGT-GTACTGCCCACTCATGACGGTGCAGGGCATGCGCACGGAATTCGCGTCCATT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 202841 101 + 608964 ATAGATAACTGGAGTGCTACA-----TCAACTAAACATGGATACCAGAGAGTGAT--TGATGCCCATTCATTTAAATGTGCAGCATGCCCACAGAATTTGTTACCATT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2316843 102 - 31377067 ATGGATAACTGGCATCGTAGACCAATGTAAACATTTATTGATGCCAAAAAATGAC------GCCCACTCATTTGAATTTGGGGTACACCCGTGGGATCAGTTGCCATT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I e dasNov3.JH569502 2694474 1738 - 6579706 I a score=524545.000000 s hg38.chr3_KI270934v1_alt 56246 55 + 163458 CAAATGCTTTGCATACTTTGGTGGCCAATC------------------CCCCTCTCAAGGGATGAAGGCAGGA s panTro5.chr3 2528428 55 - 202621043 CAAATGCTTTGCATACTTTGGTGGCCAATC------------------CCCCTCTCAAGGGATGAAGGCAGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 118574 55 - 190779 CAAATGCTTTGCATACTTTGGTGGCCAATC------------------CCCCTCTCAAGGGATGAAGGCAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 69509 54 - 106623 CAAATGCTTTGCATACTTTGGTGGCCAATC------------------CCCC-CTCAAGGGATGAAGGCAGGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2844885 55 - 123690457 CAAATGCTCTGCATACTTTGGTGGCCAATC------------------CCCCTCTCAAGGGATGAAGGCAGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2341810 55 - 204787373 CAAATGCTTTGCATAATTTGGTGGCCAATT------------------CCCCTCACAAGGGATGAAGGCAGGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192406975 55 - 192460366 CAAATGCTTTGCATAATTTGGTGGCCAATT------------------CCCCTCACAAGGGATGAAGGCAGGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19146246 55 - 19675229 CAAATGCTTTGCATAATTTGGTGGCCAATT------------------CCCCTCACAAGGGATGAAGGCAGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16382841 55 - 16847902 CAAATGCTTTGCATAATTTGGTGGCCAATT------------------CCCCTCACAAGGGATGAAGGCAGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91353218 55 + 91754291 CAAATGCTTTGCATAATTTGGTGGCCAATT------------------CCCCTCACAAGGGATGAAGGCAGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1419456 55 + 1977891 CAAATGCTTTGCATAATTTGGCGGCCAATT------------------CCCCTCACAAGGGATGAAGGCAGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7358775 55 - 7796314 CAAATGCTTTGCATAATTTGGTGGCCAATT------------------CCCCTCACAAGGGATGAAGGCAGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73833166 53 + 74750902 C-ACTGCTTTGTATAATTTGGTGGCCAGT-------------------CCCCTCACAAAGGATGAAGGCAGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17279067 53 - 17725628 C-ACTGCTTTGCATGATTTGGCGGCCGGT-------------------CCCCTCCCAAAGGATGAAGGCAGGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6368497 53 + 6778120 C-GCTGCTGTGCATAATTTGGTGGCCGGT-------------------CCCCTCACAAAGGATGAAAGCAGGA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 202942 54 + 608964 C-ACTGCTTTCCACAAGGTGGTGGCCATTC------------------CTCTTCACCAGAAATGAGGGAAGGA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2316945 72 - 31377067 C-AGTGCTTTCCACTCACTGGTggcggcccccccccgccccccccccgccccTTACAGAGGTTGAACAAAGGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2696212 52 - 6579706 CAACTGCT---CACAAATGGGTGGCCAAGT------------------CCTCTCACGAGGGATGAAGAAAGGA i dasNov3.JH569502 I 1738 C 0 e proCoq1.NW_012133858v1 14789850 591 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88379529 3613 + 114275543 I a score=981960.000000 s hg38.chr3_KI270934v1_alt 56301 75 + 163458 ----CTGGCTGTGGCAGAAGCTTCAGATGAGGTCTCTGGTCAGAGAAGTTCCACCTCACGTTGTCTTCATCATTGCTGT s panTro5.chr3 2528483 75 - 202621043 ----CTGGCTGTGGCAGAAGCTTCAGATGAGGTCTCTGGTCAGAGAAGTTCCACCTCACGTTGTCTTCATCATTGCTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 118629 75 - 190779 ----CTGGCTGTGGCAGAAGCTTCAGATGAGGTCTCTGGTCAGAGAAGTTCCACCTCACGTTGTCTTCATCATTGCTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 69563 75 - 106623 ----CTGGCTGTGGCAGAAGCTTCAGATGAGGTCTCTGGTCAGAGAAGTTCCACCTCACGTTGTCTTCATCATTGCTGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2844940 75 - 123690457 ----CTGGCTGTGGCAGAAGCTTCAGATGAGGTCTCTGGTGAGAGAAGTTCCACCTCACGTTGTCTTCATCATTGCTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2341865 75 - 204787373 ----CTGGCTATGGCAGAAGCTTCAGATGAGGTCTCTGGTCAGAGAAGTTCCACCTCACATTGTCTTCATCATTGCTAT i rheMac8.chr2 C 0 I 15 s macFas5.chr2 192407030 75 - 192460366 ----CTGGCTATGGCAGAAGCTTCAGATGAGGTCTCTGGTCAGAGAAGTTCCACCTCACATTGTCTTCATCATTGCTAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19146301 75 - 19675229 ----CTGGCTATGGCAGAAGCTTCAGATGAGGTCTCTGGTCAGAGAAGTTCCACCTCACATTGTCTTCATCATTGCTAT i macNem1.NW_012014355v1 C 0 I 15 s cerAty1.NW_012004056v1 16382896 75 - 16847902 ----CTGGCTATGGCAGAAGCTTCAGATGAGGTCTCTGGTCAGAGAAGTTCCACCTCACATTGTCTTCCTCATTGCTGT i cerAty1.NW_012004056v1 C 0 I 15 s chlSab2.chr15 91353273 75 + 91754291 ----CTGGTTGTGGCAGGAGCTTCAGATGAGGTCTCTGGTCAGAGAAGTTCCACCTCACATTGTCTTCATCATTGCTGT i chlSab2.chr15 C 0 I 15 s manLeu1.NW_012102020v1 1419511 75 + 1977891 ----CTGGCTATGGCAGAAGCTTCAGATGAGGTCTCTGGTCAGAGAAGTTCCACCTCACATTGTCTTCATCATTGCTGT i manLeu1.NW_012102020v1 C 0 I 15 s colAng1.NW_012118932v1 7358830 75 - 7796314 ----CTGGCTGTAGCAGAAGCTTCAGATGAGGTCTCTGGTCAGAGAAGTTCCACCCCACATTGTCTTCATCATTGCTGT i colAng1.NW_012118932v1 C 0 I 15 s calJac3.chr17 73833219 72 + 74750902 ----CTGGCTGTGGCCGAAGCTTCAGATGAGGTCTCTGGGCAGAAAAGTTCCACCTCATGCTGTCTTCAT---TGCTGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17279120 75 - 17725628 ----CTGGCTGTGGCAGAAGCTTCCGATGAGCTGTCTGGGCAGAAAAGTCCCACCTCATGCTGTCTTCATAACTGCTGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6368550 74 + 6778120 ----CTGGCTGTGGCAGAAGCTTCGGATGAGGTCTCTGGGCAG-AAAGTTCCACCTCATGCTGTCTTCATCATTGCTGT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88383142 75 + 114275543 ----ctgGCTGTGGCAGAGGTTTCTGATGAAGACTTTGGTCAGAAAAATTCCACCTCACGTTGGCCTCATCATAGCTCT i micMur3.chr1 I 3613 C 0 s proCoq1.NW_012133858v1 14790441 73 - 22200726 ----ctgGCTGTGGCAGAGGCTTCTGATGAAGACTCTGGTAGGAAAAGTTCCACCTCACGTTGGCCTC--CATGGCTCT i proCoq1.NW_012133858v1 I 591 C 0 s otoGar3.GL873829 202996 74 + 608964 ----CTGGCTGTGGCTGAAGCTTCAGATGAAGACTCTGGTTAGAATAGTTCCA-CTCCCGTTGTCCTCATCATGGCTCT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2317017 75 - 31377067 ----CTGGCTGTGGCGGGAGCTTCAGCTGAAGTCTCTTGTCACAATAGTCCCACCTCACGTTGTCTTCGTCACGGCCTT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2696264 75 - 6579706 CTGACAGGTTGTGGCAGAAG-TTCAGTTGGAGCCTCTTGTCAGA-AAGTTGCACTTGGTGTGGCTCTCCCCCGCCCC-- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I a score=25304.000000 s hg38.chr3_KI270934v1_alt 56376 8 + 163458 GGAGTTT-C- s panTro5.chr3 2528558 8 - 202621043 GGAGTTT-C- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 118704 8 - 190779 GGAGTTT-C- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 69638 9 - 106623 GGAGTTTCC- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845015 8 - 123690457 GGAGTTT-T- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192407105 4 - 192460366 ----CTT-C- i macFas5.chr2 C 0 I 11 s calJac3.chr17 73833291 8 + 74750902 GGAGTTT-C- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17279195 8 - 17725628 GGAGTTT-C- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6368624 8 + 6778120 GGAGTTT-C- i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88383217 7 + 114275543 -GGGTTT-T- i micMur3.chr1 C 0 I 1 s proCoq1.NW_012133858v1 14790514 7 - 22200726 -GGGTTT-T- i proCoq1.NW_012133858v1 C 0 I 1 s otoGar3.GL873829 203070 7 + 608964 -GGGTTT-T- i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 2317092 7 - 31377067 -GTGTTT-T- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2696339 8 - 6579706 -GCCTTT-TT i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e macNem1.NW_012014355v1 19146376 15 - 19675229 I e colAng1.NW_012118932v1 7358905 15 - 7796314 I e manLeu1.NW_012102020v1 1419586 15 + 1977891 I e chlSab2.chr15 91353348 15 + 91754291 I e cerAty1.NW_012004056v1 16382971 15 - 16847902 I e rheMac8.chr2 2341940 15 - 204787373 I a score=799601.000000 s hg38.chr3_KI270934v1_alt 56384 62 + 163458 GCCGTCTCAGAGCTCACACCAAGTCACAGGTGACTTTAGACAGGCCATCTTGTTTAGGTCCA s panTro5.chr3 2528566 62 - 202621043 GCCGTCTCAGAGCTCACGCCGAGTCACAGGTGACTTTAGACAGGCCATCTTGTTTAGGTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 118712 62 - 190779 GCCGTCTCAGAGCTCACGCCGAGTCACAGGTGACTTTAGACAGGCCATCTTGTTTAGGTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 69647 62 - 106623 ACCGTCTCAGAGCTCACGCCGAGTCACAGGTGACTTTAGACAGGCCATCTTGTTTAGGTCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845023 62 - 123690457 GCCGTCTCAGAGCTCACGCCGAGTCACAGGTGACTTTAGACAGGCCATCTGGTTTAGGTCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2341955 62 - 204787373 GCCGTCTCAGAGCTCACGCCAAGTCACAGGTGACTTTAGACAGGCCATCTTGTTTAGGTCCA i rheMac8.chr2 I 15 C 0 s macFas5.chr2 192407120 62 - 192460366 GCCGTCTCAGAGCTCACGCCAAGTCACAGGTGACTTTAGACAGGCCATCTTGTTTAGGTCCA i macFas5.chr2 I 11 C 0 s macNem1.NW_012014355v1 19146391 62 - 19675229 GCCGTCTCAGAGCTCACGCCAAGTCACAGGTGACTTTAGACAGGCCATCTTGTTTAGGTCCA i macNem1.NW_012014355v1 I 15 C 0 s cerAty1.NW_012004056v1 16382986 62 - 16847902 GCCGTCTCAGAGCTCACGCCAAGTCACAGGTGACTTTAGACAGGCCATCTTGTGTAGGTCCA i cerAty1.NW_012004056v1 I 15 C 0 s chlSab2.chr15 91353363 62 + 91754291 GCCATCTCAGAGCTCACGCCAAGTCACAGGTGACTTTAAACAGGCTATCCTGTTTAGGCGCA i chlSab2.chr15 I 15 C 0 s manLeu1.NW_012102020v1 1419601 62 + 1977891 GCCGTCTCAGAGCTCACGCCAAGTCACAGGTGACTTTAGACAGGCCATCTTGTTTAGGTCCA i manLeu1.NW_012102020v1 I 15 C 0 s colAng1.NW_012118932v1 7358920 62 - 7796314 GCCATCTCAGAGCTCACGCCAAGTCACAGGTGACTTTAAACAGGCCATGTTGTTTAGGTCCA i colAng1.NW_012118932v1 I 15 C 0 s calJac3.chr17 73833299 61 + 74750902 ACCAACTCACAGTTCACGCAGAGTCGCCGGGGACTTCAGACGGGCTGTCTTG-TTAGGACTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17279203 62 - 17725628 ACCGACTCAGAGTCCACGCAGAGTCGCAGGGGATGTTGGACGGGCTGTCCAGTTTAGGGCTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6368632 62 + 6778120 AGCAACTCAGAGCTCACGCAGAGTCGCAGGGGACTTTACACAGGCAGTCTTGTTCAGGACTA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88383225 62 + 114275543 GTCTTCTCAGAGTTCATGCTGGGTCACAGGTGACTTTAGACAGACTATCTTGTTTAGGTCCA i micMur3.chr1 I 1 C 0 s proCoq1.NW_012133858v1 14790522 62 - 22200726 GCCTTCTCAGAGTTCATGCTGGGTCACAGGTGACTTTAGACAGGCTATCTTGTTTAGGTCCA i proCoq1.NW_012133858v1 I 1 I 277 s otoGar3.GL873829 203078 61 + 608964 GCCTTTTCAGAGTTCATGCTGGGTCACAGGTGACTTTAGATAGGC-ATCTTGTTTATGTCCA i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 2317100 57 - 31377067 ---GCCTGTGTGTTTGTGCT--GTCACAGGTGACTTTAGCCAGGCTATCTTGTTTAAGTCCA i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2696347 62 - 6579706 GCCTTCTCAGAGTTTGGGCTGAGTCCCGGGTAACTTTAGACAGGCTCTCTCGTTTAGGGACA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I a score=512531.000000 s hg38.chr3_KI270934v1_alt 56446 52 + 163458 TGCTTAAATTTGTCTTTATAAA--AC--GTGGCATTTTTACCTCATATACACACA-C s panTro5.chr3 2528628 54 - 202621043 CGCTTAAATTTGTCTTTATAAA--ACATGTGGCATTTTTACCTCATATACACACA-C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 118774 52 - 190779 CGCTTAAATTTGTCTTTATAAA--AC--GTGGCATTTTTACCTCATATACACACA-C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 69709 54 - 106623 CGCTTAAATTTGTCTTTATAAA--ACATGTGGCATTTTTACCTCATATACACACA-C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845085 52 - 123690457 CGCTTAGATTTGTCTTTATAAA--AC--GTGGCATTTTTACCTCATATACATACA-C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2342017 55 - 204787373 CGCTTAAATTTGTCTTTATAAA--ACATGTGACATTTTTACCTCATATACACACACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192407182 55 - 192460366 CGCTTAAATTTGTCTTTATAAA--ACATGTGACATTTTTACCTCATATACACACACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19146453 55 - 19675229 CGCTTAAATTTGTCTTTATAAA--ACATGTGACATTTTTACCTCATATACACACACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16383048 55 - 16847902 CGCTTAAATTTGTCTTTATAAA--ACATGTGACATTTTTACCTCATATACACACACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91353425 55 + 91754291 CGCTTAAATTTGTCTTTATAAA--ACATGTGACATTTTTACCTCATATACACACACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1419663 53 + 1977891 CGCTTAAATTTGTCTTTATAAA--AC--GTGACATTTTTACCTCATATACACGCACC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7358982 55 - 7796314 CGCTTAAATTTGTCTTTATAAA--ACATGTGACATTTTTACCGCATATACACACACC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73833360 51 + 74750902 CGCTTCCATTTGTCTTTATAAA--AC--GTGACAGTTTTACCTCACATGCACC--CC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17279265 55 - 17725628 CGCTTCCCTTCGTCTTTATAAAACAC--GCGACAGTTTCAGCTCACACGCACATGCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6368694 53 + 6778120 CGCTTCCATTTGTCTTTGTAAC--AC--GTGACAGTTTTACCTCACATGCACACACC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88383287 53 + 114275543 CACCCACATTTGTCTTCATGAA--ACATGTGGCA-TTTCACCTCATATATACACAC- i micMur3.chr1 C 0 I 143 s otoGar3.GL873829 203139 53 + 608964 CACTTGCATTTGTCTTTATGAA--ATATGTGGCA-CTTCACCTCCTATATACACAG- i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 2317157 53 - 31377067 CACCCCGCTCCATTTTCATGAA--ATATGTGCCA-TTTCACCTCATACACACACAC- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2696409 55 - 6579706 CGCCCACCCCTGTCTTTATGAA--AGACGTGGTTTCTTCATCTCACATGCACACCCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14790584 277 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I a score=1003889.000000 s hg38.chr3_KI270934v1_alt 56498 108 + 163458 TTTAGAATCTTAAATAGCTGGAGAGTTTTCTCCAGGGACTTCTGGCTCCTGTTAGCTTGGTAACATTACTCCTGCTAACTTTGGTCATCTCCAGTAATACAG------GCGTGc s panTro5.chr3 2528682 108 - 202621043 TTTAGAATCTTAAATAGCTGGAGAGTTTTCTCCAGGGACTTCTGGCTCCTGTTAGCTTGGTAACATTACTCCTGCTAACTTTGGTCATCTCCAGTAATACAG------ACGTGc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 118826 108 - 190779 TTTAGAATCTTAAATAGCTGGAGAGTTTTCTCCAGGGACTTCTGGCTCCTGTTAGCTTGGTAACATTACTCCTGCTAACTTTGGTCATCTCCAGTAATACAG------ACGTGc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 69763 108 - 106623 TTTAGAATCTTAAATAGCTGGAGAGTTTTCTCCAGGGACTTCTGGCTCCTGTTAGCTTGGTAACATTACTCCTGCTAACTTTCGTCATCTCCAGTAATACAG------GCGTGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845137 108 - 123690457 TTCAGAATCTTAAATAGCTGGAGAGTTTTCTCCAGGCACTTCTGGCTCCTGTTGGCTTGGTAACATTACTCCTGCTAACTTTGGTCATCTCCAGTAATACAG------GCATGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2342072 108 - 204787373 TTTAGAATCTTAAATAGCTGGAGAGTTTTCTCCAGGCACTTCTGGCTCCTGTTGGTTTGGTAACATTACTCCTGCTAACTttggtcatctccagtaatagaa------gtgtgc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192407237 108 - 192460366 TTTAGAATCTTAAATAGCTGGAGAGTTTTCTCCAGGCACTTCTGGCTCCTGTTGGTTTGGTAACATTACTCCTGCTAACTTTGGTCATCTCCAGTAATAGAG------GTGTGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19146508 108 - 19675229 TTTAGAATCTTAAATAGCTGGAGAGTTTTCTCCAGGCACTTCTGGCTCCTGTTGGTTTGGTAACATTACTCCTGCTAACTTTGGTCATCTCCAGTAATAGAG------GTGTGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16383103 108 - 16847902 TTTAGAATCTTAAATAGCTGGCGAGTTTTCTCCAGGCACTTCTGGCTCCTGTTGGTTTGGTAACGTTACTCCTGCTAACTTTGGTCGTCTCCAGTAATATAG------GTGTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91353480 108 + 91754291 TTTAGAATCTTAAATAGCTGGAGAGTTTTCTCCAGGCACTTCTGGCTCCTGTTGGTTTGGTAACATTACTCCTGCTAACTTTGGTCATCTCCAGTAATACAG------GTGTGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1419716 108 + 1977891 TTTAGAATCTTAAATAGATGGAGAGTTTTCTCCAGGCACTTCTGGCTCCTGTTGGTTTGGTAACGTTACTCCTGCTAACTTTGGTCATCTCCAGTAATATAG------GTGTGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7359037 108 - 7796314 TTTAGAATGTTAAATAGCTGGAGAGTTTTCTCTAGGCACTTCTGGCTCCTGTTGGTTTGGTAACATTACTCCTGCTAACTTTGGTCATCTCCAGTAATACAG------GTGTGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73833411 101 + 74750902 TTTGGAATCTTCAATCTCTGGAGAGTTTTCTCCGGGTGCTTTTGGCTCCTGCTGGTTTGGTAACATTACTCCTGGTAAGGTTGACCAT-TCCAGGAATACAC------------ i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17279320 101 - 17725628 TTTAGGATCAGAAGTCGCTGGAGAGTTTTCTCC-GGTGCTTTTGGCTCCTGTTGGTTTGGTAATATAACTCCTGCTAAGTTTGATCATCTCCAGGAacacac------------ i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6368747 108 + 6778120 TTTAGAATCTTAAATTGCTGGAGAGTTTTCTCCGGGTGCTTCTGGCTCCTGTTGGTTTGGTAATATTACTCCTGCTAAGTTTGATCATTTCCAGGAATacacacacac------ i cebCap1.NW_016107444v1 C 0 I 356 s otoGar3.GL873829 203193 57 + 608964 TTTAGAATCTTATATAACTGGAGACTTTTC------------TGGTTCTTGCTGGTTTGGTAA--------CTGCTA------------------------------------- i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 2317210 99 - 31377067 CTTTAAGTCTTAAATAACTGGAGAATTTTCCCCAGGC-CTTCGGGTTCTTGCTGCTGTTCTTGCATTAGTTCTGCTAATTCTGGTCATCTCCAGTAATtc-------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2696464 95 - 6579706 TTTAGAACCATAAATAGCTGGTGATTTTTCTCCAGGTACTTCTGGTTCTTGCTGGTTTG-TGGAATTGCTTCTGCTAACTTTAGTTATCTGCAGTA------------------ i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14790584 277 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88383340 143 + 114275543 I a score=30876.000000 s hg38.chr3_KI270934v1_alt 56606 5 + 163458 acaca s panTro5.chr3 2528790 5 - 202621043 acaca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 118934 5 - 190779 acaca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 69871 5 - 106623 Gcaca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845245 5 - 123690457 ACGCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2342180 5 - 204787373 gcaca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192407345 5 - 192460366 Gcaca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19146616 5 - 19675229 Gcaca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16383211 5 - 16847902 GCGCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91353588 5 + 91754291 Gcacg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1419824 5 + 1977891 GCGCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7359145 5 - 7796314 GCATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73833512 5 + 74750902 ACACA i calJac3.chr17 C 0 I 49 s saiBol1.JH378146 17279421 5 - 17725628 acaca i saiBol1.JH378146 C 0 I 102 s cebCap1.NW_016107444v1 6369211 5 + 6778120 acaca i cebCap1.NW_016107444v1 I 356 C 0 e proCoq1.NW_012133858v1 14790584 277 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88383340 143 + 114275543 I e dasNov3.JH569502 2696559 0 - 6579706 C e canFam3.chr33 2317309 0 - 31377067 C e otoGar3.GL873829 203250 0 + 608964 C a score=154346.000000 s hg38.chr3_KI270934v1_alt 56611 64 + 163458 caca--------------cacacacac----acacacaca------------caGTCTCTCTTCCTCTTTATTGT-CCCCCCCCAACCCAC---CCAC s panTro5.chr3 2528795 58 - 202621043 caca--------------cacacacac----acTCT------------------GTCTCTCTTCCTCTTTATTGT-CCCCCCCCAACCCAC---CCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 118939 60 - 190779 caca--------------cacacacac----acacT----------------CTGTCTCTCTTCCTCTTTATTGT-CCCCCCACAACCCAC---CCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 69876 77 - 106623 caca--------------cacacacac----acacacacacacacacTCTCTCTCTCTCTCTTCCTCTTTATTGTCCCCCCCCCAACCCAC---CCAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845250 74 - 123690457 caca--------------cacacacac----acacacacacacacaTT----CTCTCTTTCTTCCTCTTTATTGT--TCCCCCCAACCCCCGCACCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2342185 78 - 204787373 cacacacgcacata----cacacacattt--acacacacacacacaT------TCTCTTTCTTCCTCTTTATTGTTCCTCCCACCA--------CCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192407350 78 - 192460366 cacacacgcacata----cacacacattt--acacacacacacacaT------TCTCTTTCTTCCTCTTTATTGTTCCTCCCACCA--------CCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19146621 80 - 19675229 cacacacgcacata----cacacacatttacacacacacacacacaT------TCTCTTTCTTCCTCTTTATTGTTCCTCCCACCA--------CCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16383216 86 - 16847902 Tacatacacacatacgcgcacacacatac--acacacacacacacaTTCT--CTCTCTTTCTTCCTCTTTATTGTCCCCCCCACCA--------CCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91353593 70 + 91754291 caca--------------cacacacat----acatacacacacacaTTCT--CTCTCTTTCTCCCTCTTTATTGTCCCCCCCCCCA--------CCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1419829 84 + 1977891 Tacatacacacatacgcgcacacacat----acacacacacacacaTTCT--CTCTCTTTCTTCCTCTTTATTGTCCCCCCCACCA--------CCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7359150 68 - 7796314 caca--------------cacacac------atacacacacacataTTCT--CTCTCTTTCTTCCTCTTTATTGTCACCCCCACCA--------CCAC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17279528 60 - 17725628 ------------------cacagacac----acaaaaacacacacaTT----CTCTCTTTCTTCCTCTTTATTGTCCCTTCT------------CAAC i saiBol1.JH378146 I 102 C 0 s cebCap1.NW_016107444v1 6369216 58 + 6778120 ------------------cacacacac----gcaaacacacacacaTT----CTCTCTTTCTTCCTCTTTATTGCCCC--CC------------CCAC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 203250 16 + 608964 -----------------------------------------------------ttttttttttcatttc----------------------------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2317309 38 - 31377067 ---------------------------------------------------tctctctctctctctctctctc-tctctcacacac--------acac i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2696559 22 - 6579706 -------------------ACTCACAC----ACACTGTCACCTAC----------------------------------------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14790584 277 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88383340 143 + 114275543 I e calJac3.chr17 73833517 49 + 74750902 I a score=400467.000000 s hg38.chr3_KI270934v1_alt 56675 37 + 163458 ATGCAATCATAATGATACATTTTAGTTCCCAAATGCT s panTro5.chr3 2528853 37 - 202621043 ATGCAATCATAATGATACATTTTAGTTCCCAAATGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 118999 37 - 190779 ATGCAATCATAATGATACATTTTAGTTCCCAAATGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 69953 37 - 106623 ATGCAATCATAATGATACATTTTAGTTCCCAAATGCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845324 37 - 123690457 ATGCAATCATAATTATACTCTTTAGTTCCCAAATGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2342263 37 - 204787373 ATGCAATCATAATGATACATTTTAGTTCCCAAATGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192407428 37 - 192460366 ATGCAATCATAATGAAACATTTTAGTTCCCAAATGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19146701 37 - 19675229 ATGCAATCATAATGATACATTTTAGTTCCCAAATGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16383302 37 - 16847902 ATGCAATCATAATGATACATTTTAGTTCCCAAATGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91353663 37 + 91754291 ATGCAATCATAATGATACATTTTAGTTCCCAAATGCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1419913 37 + 1977891 ATGCAATCATAATGATACATTTTAGTTCCCAAATGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7359218 37 - 7796314 ATGCAATCATAATGATACATTTTAGTTCCCAAATGCT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17279588 37 - 17725628 ATGCAATCATAATTATACACTTTAGTTCCCAAATGCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6369274 37 + 6778120 ATGCAATCATAATTATACACTTTAGTTCCCAAACGCT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88383483 37 + 114275543 ATGCAATCATAATTATACACTTTAATTTCCAAATGCT i micMur3.chr1 I 143 C 0 s canFam3.chr33 2317347 37 - 31377067 acacacacaTAATTATACACTTTAGTTCCCAAATGCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2696581 32 - 6579706 ----AAGCA-AATTATATACTTCAATTCCCAAATGCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14790584 277 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e calJac3.chr17 73833517 49 + 74750902 I e otoGar3.GL873829 203266 0 + 608964 C a score=48866.000000 s hg38.chr3_KI270934v1_alt 56712 5 + 163458 TCTAA s panTro5.chr3 2528890 5 - 202621043 TCTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119036 5 - 190779 TCTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 69990 5 - 106623 TCTAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845361 5 - 123690457 TCTAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2342300 5 - 204787373 TCTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192407465 5 - 192460366 TCTAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19146738 5 - 19675229 TCTAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16383339 5 - 16847902 TCTAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91353700 5 + 91754291 CCTAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1419950 5 + 1977891 TCTAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7359255 5 - 7796314 CCTAA i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17279625 5 - 17725628 TCTGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6369311 5 + 6778120 TCTAA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88383520 5 + 114275543 TCTAA i micMur3.chr1 C 0 I 25 s dasNov3.JH569502 2696613 5 - 6579706 TCTGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14790584 277 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e calJac3.chr17 73833517 49 + 74750902 I e canFam3.chr33 2317384 0 - 31377067 C e otoGar3.GL873829 203266 0 + 608964 C a score=1489211.000000 s hg38.chr3_KI270934v1_alt 56717 212 + 163458 TTTGTGTTGTTCTTGTTG--ACGttttgagacacggtctcgctctgtca--ccaggctggagtgcagtgacgcaatctcagctcactgcaacctccgcctcccaggttcaagt--gattctcctgcctcacccttttgagtagttgggattacaggcacctgccactatgcccagctaatttgtgta-tttttagtagagacaggat--ttcaccatgttg s panTro5.chr3 2528895 212 - 202621043 TTTGTGTTGTTGCTGTTG--ATGttttgagacagggtctcgctccgtca--ccaggctggagtgcagtgacacaatctcagctcactgcaacctctgcctcccaggttcaagt--gattctcctgcctcaccctcttgagtagttgggattacaggcacctgccactacgcccagctaatttgtgta-tttttagtagagacaggat--ttcaccatgttg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119041 212 - 190779 TTTGTGTTGTTGCTGTTG--ATGttttgagacagggtctcgctccgtca--ccaggctggagtgcagtgacacaatctcagctcactgcaacctccgcctcccaggttcaagt--gattctcctgcctcaccctcttgagtagttgggattacaggcacctgccactacgcccagctaatttgtgta-tttttagtagagacaggat--ttcaccatgttg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 69995 212 - 106623 TTTGTGTTGTTGTTGTTG--ATGttttgagacagggtctcgctctgtca--ccaggctggagtgcagtgacgcaatctcagctcactgcaacctccgcctcccaggttcaagt--gattcttctacctcaccctcttgagtagttgggattacaggcacctgccactatgcccagctaatttgtgta-tttttagtagagacaggat--ttcaccatgttg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845366 213 - 123690457 TTCGTGTTGTTGTCGTTG--ATGttttgagacacggtctcgctctgtca-cccaggctggagggcagtgacgcagtctcagctcactgcaacctctgcctcccaggttcaagc--aattctcctgcctcagcctcctgagtaactgggattacaggcacctgccactacacccagctaatttgtgta-tttttagtagagacagttt--ttcaccatgttg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2342305 209 - 204787373 tttgttttgttgttgtt-----gttttgagacaggggctcgctctgtcg--ccaggctggagtgcagtgatgcaatctctgctcacggcaacctccacttcccgggttcaagt--gattctcctgcctcagcttcctgagtagttgggattacagccacatgccaccacacccagctaatttgtgta-tttttagtagagataggat--ttcaccatgttg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192407470 209 - 192460366 tttgttttgttgttgtt-----gttttgagacaggggctcgctctgtcg--ccaggctggagtgcagtgatgcaatctctgctcagggcaacctccacttcccgggttcaagt--gattctcctgcctcagcttcctgagtagttgggattacagccacatgccaccacacccagctaatttgtgta-tttttagtagagataggat--ttcaccatgttg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19146743 209 - 19675229 TTAGttttgttgttgtt-----gttttgagacaggggctcgctctgtcg--ccaggctggagtgcagtgatgcaatctctgctcacggcaacctccacttcccgggttcaagt--gattctcctgcctcagcttcctgagtagttgggattacagccacccgccaccacacccagctaatttgtgta-tttttagtagagataggat--ttcaccatgttg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16383344 209 - 16847902 tttgttttgttgttgtt-----gttttgagacaggggctcgctctgtcg--ccaggctggagtgcagtgacgcaatctcagctcacggcaacctccactttctgggttcaagt--gattctcctgcctcagcttcctgagtagttgggattacagccacatgccaccacacccagctagtttgtgta-tttttagtagagataggat--ttcaccatgttg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91353705 209 + 91754291 tttgttttgttgttgtt-----gttttgagacaggggctcgctctgtcg--ccaggctggagtgcagtgacacaatctcagctcacagcaacctccacttcctgggttcaagc--gattctcctgcctcagcctcctgagtagttgggattgcagccacatgccaccacgccctgctaatttgtgta-tttttagtagagacaggat--ttcaccatgttg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1419955 209 + 1977891 tttgttttgttgttgtt-----gttttgagacaggggctcgctctgtcg--ccaggctggagtgcagtgacgcaatctcagctcacggcaacctccactttccgggttcaagc--gattctcctgcctcagcctcctgagtagttgggattacagccacatgccaccacgcccagctagtttgtgta-tttttagtagagacaggat--ttcaccatgttg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7359260 209 - 7796314 tttgttttgttgttgtt-----gttttgagacaggggctcactctgttg--ccaggctggagtgcagtgacgcaatctcagctcacggcaacctccacttcctgggttcaagt--gattctcctgcctcagcctcctgagtagttgggattacagccacatgccaccatgcccagctaatttgtgta-tttttagtagagacaggat--ttcaccatgttg i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17279630 215 - 17725628 tttgttttgttgttgctgtttttgtgtgagacagggtctcgctcagttg-cccaggctggagtgcagtggtgtgatctcagctccctgcaacctctgcctcccgggttcaggc--aattctcctgcctcagcctcccaagtagttgggactacaggcgtgcaccaccatgcccggctaatttttcta-tttttagtagggatggggt--ttcaccatgttg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6369316 205 + 6778120 TCTGTTGTGttgttgttg----tgtttgagacagggtcccgctcagctg-ctcaggctggagtgca--------atctcagcgcactgcaacctctgcctcccgggttcaagcaaaattctcctgcctcggcctcctgagtagctgggattacaggtgtgagccaccacggcctgctaatttttcta-tttttagtagggacagggt--ttcaccacgttg i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 203266 191 + 608964 -----------------------ttttgatgcggtatctcactctgttgccccaggctagagtgtcatggcatcagcttagctcatggcaacctcaaact-ctgggttcaagc--aatcttcctgccccagccttctgagtagctgagactataagcacctaccacaatgccaggctaatttttctattttttaatagggacagcat--cttgc--tcttg i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2696618 107 - 6579706 --------------------------------------------------------CTGGCGTATC-------------------CCATATTTTACATTTTTTGGACTCCAAT--AATAAC-----------------AGTAGTCAGCATTGTGTGTA-------------------AGTGTGTGTG-TCCTTAATTAAGATGAAATTATCTACTGTATTG i dasNov3.JH569502 C 0 I 133 e proCoq1.NW_012133858v1 14790584 277 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88383525 25 + 114275543 I e calJac3.chr17 73833517 49 + 74750902 I e canFam3.chr33 2317384 0 - 31377067 C a score=660574.000000 s hg38.chr3_KI270934v1_alt 56929 94 + 163458 cctgggttggtctcaaactcctggcctcaagtgatccgcctgcctcggcctctcaaagtgctgggattacaggcatgagccaccgcacccagt--------------------------------------------------------------------------------------------------------------------------c s panTro5.chr3 2529107 94 - 202621043 cctgggttggtctcaaactcctggcctcaagtgatccgcccgcctcggcctctcaaagtgctgggattacaggcatgagccaccgcacccagt--------------------------------------------------------------------------------------------------------------------------c i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119253 94 - 190779 cctgggttggtctcaaactcctggcctcaagtgatccgcccgcctcggcctctcaaagtgctgggattacaggcatgagccaccgcacccagt--------------------------------------------------------------------------------------------------------------------------c i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 70207 94 - 106623 cctgggttggtctcaaactcctggcctcaagtgatccgcccgcctcggcctctcaaagtgctgggattacaggcatgagccaccgcacccagt--------------------------------------------------------------------------------------------------------------------------c i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845579 92 - 123690457 cctaggttggtctcaaactcctgacctc--gtgatccgcccgcctcggcctctcaaagtgctgggattacaggcgtcagccaccgcacccagc--------------------------------------------------------------------------------------------------------------------------c i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2342514 94 - 204787373 cctaagttggtctcaaacttctggcctcaagtgatctgcccgccttggcctctcaaagtgccgggattacaggcgtgagccaccgcacccagc--------------------------------------------------------------------------------------------------------------------------c i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192407679 94 - 192460366 cctaagttggtctcaaacttctggcctcaagtgatctgcccgccttggcctctcaaagtgccgggattacaggcgtgagccaccgcaccctgc--------------------------------------------------------------------------------------------------------------------------c i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19146952 94 - 19675229 cctaagttgttctcaaacttctggcctcaagtgatctgcccgccttggcctctcaaagtgccgggattacaggcgtgagccaccgcacccagc--------------------------------------------------------------------------------------------------------------------------c i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16383553 94 - 16847902 cgtaagttggtctcaaacttctggcctcaagtgatctgcctgccttggcctctcaaagtgctgggattacaggcgtgagccaccgcacccagc--------------------------------------------------------------------------------------------------------------------------c i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91353914 94 + 91754291 cctaagttggtctcaaacttctagcctcaagtgatccgcctgcctcggcctctcaaagtgctgggattacaggcgagagccaccgcacccagc--------------------------------------------------------------------------------------------------------------------------c i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1420164 94 + 1977891 cctaagttggtctcaaacttctggcctcaaatgatccacccaccttggcctctcaaagtgctgggattacaggcgtgagccaccgcacccagc--------------------------------------------------------------------------------------------------------------------------c i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7359469 94 - 7796314 cctaagttggtctcaaacttctggcctcaagtgatccgcccgccttggcctctcaaagtgctgggattacaggcgtgagccacggcacccagc--------------------------------------------------------------------------------------------------------------------------c i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17279845 78 - 17725628 cccaggttggtctcaaactcctggcctcaagcaatgtgcccccctcagcctctccaagtgctgggatca----------------caCTCAGC--------------------------------------------------------------------------------------------------------------------------C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6369521 78 + 6778120 cccaggctggtctcaaactccgggcctcaagcaatctgccccccttagcctctcaaagtgctgagatga----------------caCTCAGC--------------------------------------------------------------------------------------------------------------------------C i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 203457 215 + 608964 ctcaggctggtctcatactcctgagttcaagcaatcctcctaccttggccttccagagtgc-aggattacaggtgtgagccactgtgcccagccTAATTTTGCTAACATTGATAATCTCTAGTAGTACTCTTTCTCACACACACACACATACCCCATtctctctcttctttcttctctcctctctctctctctctcATGCAATCATAATTATACAC i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14790584 277 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88383525 25 + 114275543 I e dasNov3.JH569502 2696725 133 - 6579706 I e calJac3.chr17 73833517 49 + 74750902 I e canFam3.chr33 2317384 0 - 31377067 C a score=246258.000000 s hg38.chr3_KI270934v1_alt 57023 28 + 163458 TCTAATTTGTGTAT-CCCATATTTTACAG s panTro5.chr3 2529201 28 - 202621043 TCTAATTTGTGTAT-CCCATATTTTACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119347 28 - 190779 TCTAATTTGTGTAT-CCCATATTTTACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 70301 28 - 106623 TCTAATTTGTGTAT-CCCATATTTTACAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845671 28 - 123690457 TCTAATTTGTGTAT-CCCATATTTTACAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2342608 28 - 204787373 TCTGATTTGTGTAT-CCCATATTTTACAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192407773 28 - 192460366 TCTGATTTGTGTAT-CCCATATTTTACAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19147046 28 - 19675229 TCTGATTTGTGTAT-CCCATATTTTACAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16383647 28 - 16847902 TCTGATTTGTGTAT-CCCATATTTTACAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91354008 28 + 91754291 TCTGATTTGTGTAT-CCCATATTTTACAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1420258 28 + 1977891 TCTGATTTGTGTAT-CCCATATTTTACAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7359563 28 - 7796314 TCTGATTTGTGTAT-CCCATATTTTACAG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17279923 28 - 17725628 TCTAATTTCTATAT-TCCTTATTTTACAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6369599 28 + 6778120 TCTAATTTGTATAC-TCCTTATTTTACAG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 203672 29 + 608964 TTTAATTCCCAAATGCTCATATTTTACAA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2317384 27 - 31377067 TCTAATTGGCATAG-CCTATATTTTACA- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14790584 277 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88383525 25 + 114275543 I e dasNov3.JH569502 2696725 133 - 6579706 I e calJac3.chr17 73833517 49 + 74750902 I a score=20025.000000 s hg38.chr3_KI270934v1_alt 57051 2 + 163458 AT s panTro5.chr3 2529229 2 - 202621043 AT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119375 2 - 190779 AT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 70329 2 - 106623 AT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845699 2 - 123690457 AT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2342636 2 - 204787373 AT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192407801 2 - 192460366 AT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19147074 2 - 19675229 AT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16383675 2 - 16847902 AT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91354036 2 + 91754291 AT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1420286 2 + 1977891 AT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7359591 2 - 7796314 AT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17279951 2 - 17725628 AT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6369627 2 + 6778120 AT i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14790861 2 - 22200726 AT i proCoq1.NW_012133858v1 I 277 C 0 s otoGar3.GL873829 203701 1 + 608964 -T i otoGar3.GL873829 C 0 I 2 e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88383525 25 + 114275543 I e dasNov3.JH569502 2696725 133 - 6579706 I e calJac3.chr17 73833517 49 + 74750902 I e canFam3.chr33 2317411 0 - 31377067 C a score=638779.000000 s hg38.chr3_KI270934v1_alt 57053 69 + 163458 TTTTTAAGCTAGTCAAATTTTACAA--TTTTTTTACTTCCAAAAATAGCAGTAAT--------CAGCATCATATGTACA s panTro5.chr3 2529231 69 - 202621043 TTTTTAAGCTAGTCAAATTTTACAA--TTTTTTTACTTCCAAAAATAGCAGTAAT--------CAGCATCATATGTACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119377 69 - 190779 TTTTTAAGCTAGTCAAATTTTACAA--TTTTTTTACTTCCAAAAATAGCAGTAAT--------CAGCATCATATGTACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 70331 69 - 106623 TTTTTAAGCTAGTCAAATTTTACAA--TTTTTTTACTTCTAAAAATAACAGTAAT--------CAGCATCATATGTACA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845701 69 - 123690457 TTTTTAAGCTAGTCAAATTTTACAA--TTTTTTTACTTCCAAAAATAACAGTAAT--------CAGCACTATACGTACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2342638 68 - 204787373 TTTTTAAACTAGTCAAATTTTACAT---TTTTTTACTTCCAAAAATAACAATAAT--------CAACATTATATGTACA i rheMac8.chr2 C 0 I 23 s macFas5.chr2 192407803 68 - 192460366 TTTTTAAACTAGTCAAATTTTACAT---TTTTTTACTTCCAAAAATAACAATAAT--------CAACATTATATGTACA i macFas5.chr2 C 0 I 23 s macNem1.NW_012014355v1 19147076 69 - 19675229 TTTTTAAACTAGTCAAATTTTACAT--CTTTTTTACTTCCAAAAATAACAATAAT--------CAACATTATATGTACA i macNem1.NW_012014355v1 C 0 I 23 s cerAty1.NW_012004056v1 16383677 66 - 16847902 TTTTTAAACTAGTCAAATTTTACAC--TTTTTTTACTTCCAAAAAT---AATAAT--------CAGCATTATATGTACA i cerAty1.NW_012004056v1 C 0 I 36 s chlSab2.chr15 91354038 66 + 91754291 TTTTTAAACTAGTCAAAGTTTACAC--TTTTTTTACTTCCAAAAAT---AATAAT--------CAGCATTATATGTACA i chlSab2.chr15 C 0 I 23 s manLeu1.NW_012102020v1 1420288 66 + 1977891 TTTTTAAACTAGTCAAATTTTACAC--TTTTTTTACTTCCAAAAAT---AATAAT--------CAGCATTATATGTACA i manLeu1.NW_012102020v1 C 0 I 36 s colAng1.NW_012118932v1 7359593 69 - 7796314 TTTTAAAACTAGTCAAATTTTACAC--TTTTTTTACTTCCAAAAATAACAATAAT--------CAGCATTATATGTACA i colAng1.NW_012118932v1 C 0 I 23 s saiBol1.JH378146 17279953 69 - 17725628 TTTTAAAGGTTGTCAAATGTCACAG--ATTTTTGACTTCCAAAAATAACGATAAT--------CAGCGTTGTATGCACA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6369629 69 + 6778120 TTTTAAAGGTAGTCAAATTTCACAA--ATTTTTGACTTCCAAAAATAACGATAAT--------CAGCGTTGTATGTACA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88383550 70 + 114275543 TTTTTAGGCTAGTCAAATTTTACAAA-TTTTTTGACTTCCAATAACAACAGTAAT--------CAGTGTTGTATGTACA i micMur3.chr1 I 25 C 0 s proCoq1.NW_012133858v1 14790863 70 - 22200726 TTTTTAGGCTAGTTAAATGTTACAAA-TTTTTTGACTTCCAATAAAAACAGTAAT--------CAGCATTGCATGTACA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 203704 71 + 608964 TGTTTTGAACAGTCAAATTTCACAAGTTTTTTTTACTTCTGATCAAAACAGCTAT--------CAGCATTGTATGTACA i otoGar3.GL873829 I 2 C 0 s canFam3.chr33 2317411 54 - 31377067 -----------------------AA--ATTTTTGGCTTCCAATAACAGTAATCATGTTATTGGAAGCATTGCATGTACA i canFam3.chr33 C 0 C 0 e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e dasNov3.JH569502 2696725 133 - 6579706 I e calJac3.chr17 73833517 49 + 74750902 I a score=35591.000000 s hg38.chr3_KI270934v1_alt 57122 8 + 163458 TGTCCGTG s panTro5.chr3 2529300 8 - 202621043 TGTCCGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119446 8 - 190779 TGTCCGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 70400 8 - 106623 TGTCCGTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845770 6 - 123690457 TGT--GTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2342729 8 - 204787373 TGTACATG i rheMac8.chr2 I 23 I 2 s macFas5.chr2 192407894 8 - 192460366 TGTACATG i macFas5.chr2 I 23 I 2 s macNem1.NW_012014355v1 19147168 8 - 19675229 TGTACATG i macNem1.NW_012014355v1 I 23 I 2 s chlSab2.chr15 91354127 8 + 91754291 TGTACATG i chlSab2.chr15 I 23 I 2 s colAng1.NW_012118932v1 7359685 8 - 7796314 TGTACATG i colAng1.NW_012118932v1 I 23 I 2 s saiBol1.JH378146 17280022 6 - 17725628 --TGCGTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6369698 6 + 6778120 --CGCGTG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88383620 6 + 114275543 --TGTGTG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14790933 6 - 22200726 --TGTGTG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 203775 6 + 608964 --TGTGTG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2317465 6 - 31377067 --TATATG i canFam3.chr33 C 0 C 0 e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e dasNov3.JH569502 2696725 133 - 6579706 I e calJac3.chr17 73833517 49 + 74750902 I e manLeu1.NW_012102020v1 1420354 36 + 1977891 I e cerAty1.NW_012004056v1 16383743 36 - 16847902 I a score=597127.000000 s hg38.chr3_KI270934v1_alt 57130 57 + 163458 TCCTCATATGTA-GTAATTAAGATTACATGAGCCACTGTATTAAGTATCACCCACTTG s panTro5.chr3 2529308 57 - 202621043 TCCTCATATGTA-GTAATTAAGATTACATGAGCCACTGTATTAGGTATCACCCATctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119454 57 - 190779 TCCTCATATGTA-GTAATTAAGATTACATGAGCCACTGTATTAGGTATCACCCATctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 70408 57 - 106623 TCCTCATATGTA-GTAATTAAGATTACATGAGCCACTGTATTAGGTATCACCCATTtg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845776 57 - 123690457 TCTTCATATGTA-GTAACTAAGATTACATGAGCCACTGTATTAGGTATCACCCATTTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2342739 57 - 204787373 TCCTCATATGTA-GTAATTAATATTACATGAGCCCCTGTATTAGGTATCACCAATTtg i rheMac8.chr2 I 2 C 0 s macFas5.chr2 192407904 57 - 192460366 TCCTCATATGTA-GTAATTAATATTACATGAGCCCCTGTATTAGGTATCACCAATTTG i macFas5.chr2 I 2 C 0 s macNem1.NW_012014355v1 19147178 57 - 19675229 TCCTCATATGTA-GTAATTAATATTACATGAGCCCCTGTATTAGGTATCACCAATTtg i macNem1.NW_012014355v1 I 2 C 0 s cerAty1.NW_012004056v1 16383779 57 - 16847902 TCCTCATATGTA-GTAATTAATATTACATGAGCCCCTGTATTAGGTAACACCAATTtg i cerAty1.NW_012004056v1 I 36 C 0 s chlSab2.chr15 91354137 57 + 91754291 TCCTCATATGTA-CTAATTAATATTACATGAGCCCCTGTATTAGGTATCACCAATTTG i chlSab2.chr15 I 2 C 0 s manLeu1.NW_012102020v1 1420390 57 + 1977891 TCCTCATATGTA-GTAATTAATATTACATGAGCCCCTGTATTAGGTAACACCAATTtg i manLeu1.NW_012102020v1 I 36 C 0 s colAng1.NW_012118932v1 7359695 57 - 7796314 TCCTCATATGTA-GTAATTAATATTACGTGAGCCCCTGTATTAGGCACCGCCAATTTG i colAng1.NW_012118932v1 I 2 C 0 s saiBol1.JH378146 17280028 57 - 17725628 TTCTCATATGCA-GTAATTAAGGTGACATGAACCACTGTATTAGGTACCACCAATTTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6369704 57 + 6778120 TCCTCGTATGCA-GCACTTAAGATGACGTGAACCACTGTATTAGGTACCACCAATTTG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88383626 52 + 114275543 TCCTCATATGTA-ATAATTAAGA-----TTAACCACTGTATTAGGTGTCACCAATTtg i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14790939 57 - 22200726 TCCTTATATGTA-GTAATTAAGATTAAGTTAACCACTGTATTAGGTATCACCAATTtg i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 203781 57 + 608964 TCCTTATACATA-GAAATTGAGATTAAATTAACTGCTGTGTTAGATACCACCAATCTG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2317471 57 - 31377067 CCCTTATATGCATGTAATTAAAAT-AAATTATCCACTTTATCAGGTATCCTCGATTCA i canFam3.chr33 C 0 C 0 e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e dasNov3.JH569502 2696725 133 - 6579706 I e calJac3.chr17 73833517 49 + 74750902 I a score=544072.000000 s hg38.chr3_KI270934v1_alt 57187 48 + 163458 AGGAAATACAAAGCAAGAGAAG---AAAACCTATTTAAGAATTGGGTTTAT s panTro5.chr3 2529365 48 - 202621043 aggaaatacaaagcaagagaag---aaaacctatttaagaattgggtttat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119511 48 - 190779 aggaaatacaaagcaagagaag---aaaacctatttaagaattgggtttat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 70465 48 - 106623 aggaaatacaaagcaagagaag---aaaacctatttaagaattgggtttat i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845833 48 - 123690457 AGGAAATACAAAGCAAGAGGAG---AAAACCTATTTAAGAACTGGGTTTAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2342796 48 - 204787373 aggaagtacaaagcaagagaag---aacaactatttaagaattgggtttat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192407961 48 - 192460366 AGGAAGTACAAAGCAAGAGAAG---AACAACTATTTAAGAACTGGGTTTAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19147235 48 - 19675229 aggaagtacaaagcaagagaag---aacaactatttaagaattgggtttat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16383836 48 - 16847902 aggaagtacaaagcaagagaag---aacaactatttaagaattgggtttat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91354194 48 + 91754291 AGGAAGTACAAAGCAAGAGAAG---AACAACTATTTAAGAATTGGGTTTAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1420447 48 + 1977891 aggaagtacaaagcaagagaag---aacaactatttaagaattgggtttat i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7359752 48 - 7796314 AGGAAGTacaaagcaagagaag---aacaactatttaagaactgggtttat i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73833566 41 + 74750902 aaaaaaaacaaaacaaaacaaa---aAC-------TAAGAATTGGGTTTAT i calJac3.chr17 I 49 C 0 s saiBol1.JH378146 17280085 41 - 17725628 AGGGGGTACAAAGCAAGAGAAG---AAC-------CAAGAATTGGGTTCAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6369761 44 + 6778120 AGGAGGTacaaagcaagagaagaaaaac-------taagaattgggtttat i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88383678 44 + 114275543 aagaagtacaaagcaagaggaa---aaaacc----taaaaattgggtttat i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14790996 44 - 22200726 aagaagtacaaagcaagagaag---aaaaac----taagaattaggtttat i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 203838 44 + 608964 AAGAAGTACAAAGCAAGAAAAG---AAAAAC----TAAGAACTGGGTTCAT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2317528 48 - 31377067 AATAAATGCAAAGCAGGAAAAG---AAAAACTACTTAAGAATAGGATTTAT i canFam3.chr33 C 0 I 416 e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e dasNov3.JH569502 2696725 133 - 6579706 I a score=246376.000000 s hg38.chr3_KI270934v1_alt 57235 23 + 163458 -------ATAACAGTGGTGTT---gtcattttt s panTro5.chr3 2529413 26 - 202621043 -------ataacagtggtgttattgtcattttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119559 26 - 190779 -------ataacagtggtgttattgtcattttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 70513 26 - 106623 -------ataacagtggtgttattgtcattttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845881 26 - 123690457 -------ATAACAGTGGTGttattgtcactttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2342844 26 - 204787373 -------ataacagtggtgctgttgtcattttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192408009 26 - 192460366 -------ATAACAGTGGTGCTGTTgtcattttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19147283 26 - 19675229 -------ataacagtggtgctgttgtcattttt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16383884 26 - 16847902 -------ataacagtggtgttattgtcattttt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91354242 26 + 91754291 -------ATAACAGTGGTGttattgtcattttt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1420495 26 + 1977891 -------ataacagtggtgttattgtcattttt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7359800 26 - 7796314 -------gtaacagtggtgttattgtcattttt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73833607 26 + 74750902 -------GTAACAGTGGTGTTATTGTCACTTTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17280126 23 - 17725628 -------GTAACAGTGGTG---GTGTCACTCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6369805 23 + 6778120 -------gtaacagtggtg---ttgtcaccttt i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88383722 31 + 114275543 gttaa--ataacagtggcgttattgtcatttat i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14791040 33 - 22200726 gttaaatataacagtgatgttactgtcgtttat i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 203882 25 + 608964 ATTAT--------GTGGTGTTATTACGGTTTAT i otoGar3.GL873829 C 0 C 0 e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e dasNov3.JH569502 2696725 133 - 6579706 I e canFam3.chr33 2317576 416 - 31377067 I a score=91454.000000 s hg38.chr3_KI270934v1_alt 57258 8 + 163458 gtaaactg s panTro5.chr3 2529439 8 - 202621043 gtaaactg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119585 8 - 190779 gtaaactg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 70539 8 - 106623 gtaaactg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845907 8 - 123690457 gtaaactg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2342870 8 - 204787373 gtcaactg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192408035 8 - 192460366 gtcaactg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19147309 8 - 19675229 gtcaactg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16383910 8 - 16847902 gtcaactg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91354268 8 + 91754291 gtcaactg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1420521 8 + 1977891 gtcaactg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7359826 8 - 7796314 gtcaactg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73833633 8 + 74750902 GTAAACTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17280149 8 - 17725628 GCAAACTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6369828 7 + 6778120 gt-aactg i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88383753 8 + 114275543 gcaaactg i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14791073 8 - 22200726 gcaaactg i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 203907 8 + 608964 GCAAACTG i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2696858 8 - 6579706 gttaactt i dasNov3.JH569502 I 133 C 0 e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e canFam3.chr33 2317576 416 - 31377067 I a score=644520.000000 s hg38.chr3_KI270934v1_alt 57266 58 + 163458 ctctccattcatgccaaattatagagcagcttc---ggaacaattatatcattaaatTTAC s panTro5.chr3 2529447 58 - 202621043 ctctccattcatgcctaattatagtacagcttc---ggaacaattatatcattaaatttac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119593 58 - 190779 ctctccattcatgcctaattatagtacagcttc---ggaacaattatatcattaaatttac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 70547 58 - 106623 ctctccattcatgcctaattatagtgcagcttc---ggaacaattatatcattaaatttac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845915 55 - 123690457 ctctccattcatgcctaattatagtgcagcttc---agaaca---atatcattaaatTTAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2342878 58 - 204787373 ctctccattcatgcctaattatagtgcagcttc---agaacaattatatcattaaatTTAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192408043 58 - 192460366 ctctccattcatgcctaattatagtgcagcttc---agaacaattatatcattaaatTTAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19147317 58 - 19675229 ctctccattcatgcctaattatagtgcagcttc---agaacaattatatcattaaatTTAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16383918 58 - 16847902 ctctccattcatgcctaattgtagtgcagcttc---agaacaattatatcattaaatTTAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91354276 58 + 91754291 ctctccattcatgcctaattataatgcagcttc---agaacaatcatatcattaaatTTAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1420529 58 + 1977891 ctctccattcatgcctaattgtagtgcagcttc---agaacaattatatcattaaatTTAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7359834 58 - 7796314 ctctccattcatgcctaattatagtgcagcttc---agaacaattatatcattaaatTTAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73833641 58 + 74750902 CTCTTCATCCATCCCTAATTATAGTGCAGCTTC---ATAACAATTATATCATTACATTTAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17280157 57 - 17725628 CTCTCCATTCAGACCTGATCATAGTGCAGCTTC---ATGACAATT-CATCATTCAACTTAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6369835 55 + 6778120 ctc--cattcatacctaattagagtgcagcttt---gtaacaatt-tatcattaaatTTAC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88383761 58 + 114275543 ttctccattcatgcctaattagagcgcaacttc---gtaacatgtatatcatcaaatttat i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14791081 58 - 22200726 ttctccattcatgcctaattatagcgcagcttc---ctaacatttatatcatcaaatttac i proCoq1.NW_012133858v1 C 0 I 1083 s otoGar3.GL873829 203915 61 + 608964 TTCTCCATTCATGTCTAACTGCAGGGCAGCTGCAGGGTAACATTTATATCAACAGATTTCC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2317992 52 - 31377067 CAATCCATTCATGCCTAACTATAGTGTAGCTTA---------ATGATATCGTTAAATTAAT i canFam3.chr33 I 416 C 0 s dasNov3.JH569502 2696866 26 - 6579706 ------ttctgtgtttaatAACACCGAATACC----------------------------- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I a score=596061.000000 s hg38.chr3_KI270934v1_alt 57324 51 + 163458 GTTTTGTGTGATTTCAGTACTGAATGCCCTTTTCTTAACTTTCAGAGCCCA s panTro5.chr3 2529505 51 - 202621043 gtTTTGTGTGATTTCAGTACTGAATGCCCTTTTCTTAACTTTCAGAGCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119651 51 - 190779 gtTTTGTGTGATTTCAGTACTGAATGCCCTTTTCTTAACTTTCAGAGCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 70605 51 - 106623 gtTTTGTGTGATTTCAGTACTGAATGCCCTTTTCTTAACTTTCAGAGCCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2845970 51 - 123690457 ATTTTGTGTGACTTCAATACCAAATGCCATTTTCTTAACTTTCAGAGCTAA i nomLeu3.chr11 C 0 I 11 s rheMac8.chr2 2342936 51 - 204787373 ATTTTGTGTGACTTCAATACCGAATGCCATTTTCTTAATTTTCAGAGCCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192408101 51 - 192460366 ATTTTGTGTGACTTCAATACCGAATGCCATTTTCTTAACTTTCAGAGCCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19147375 51 - 19675229 ATTTTGTGTGACTTCAATACCGAATGCCATTTTCTTAACTTTCAGAGCCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16383976 51 - 16847902 ATTTTGTGTGACTTCAATACCGAATGCCATTTTCTTAACTTTCAGAGCCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91354334 51 + 91754291 ATTTTGTGTGACTTCAATACCGAATGCCATTTTCTTAACTTTCAGAGCCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1420587 51 + 1977891 ATTTTGTGTGACTTCAATACCGAATGCCATTTTCTTAACTTTCAGAGCCTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7359892 51 - 7796314 ATTTTGTGTGACTTCAATACCGAATGCCATTTTCTTAACTTTCAGAGCCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73833699 51 + 74750902 ATTTTGTTTGACTTCAATACCAACTGCCATTTTCTTAACTTTCAGAGCTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17280214 51 - 17725628 ATCTTGTTTGACTTCAATACTGAATTCCGTTTTCTTAACTTTCAGAGCTCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6369890 51 + 6778120 ATTTTGTTTGACTTCAATACTGAATGCCATTTTCTTAACTTTCAGAGCTCC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88383819 51 + 114275543 attctgtttgacttCAACACTGAATGCCATTGTTGAAACTTTCAGAGCCCA i micMur3.chr1 C 0 I 367 s otoGar3.GL873829 203976 50 + 608964 ATTCTGTTTGACTTCAACACTGAATGCCATTTTTTAGACTTTCAGAGCCC- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2318044 51 - 31377067 ATTTTGTTAGATTTCAATATTAAATACTATTTTCTCACCTTTCAGAGCCCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2696892 40 - 6579706 ATTTTCTTAACTTTCAGAATTCACTGCCCATTTTTT-----------CCCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14791139 1083 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I a score=2672163.000000 s hg38.chr3_KI270934v1_alt 57375 287 + 163458 CTGAAAG---------TTTCGGG-------GCTCACGTGGCCCACCATT-GTCCcagtcactcagcaaacacatcagtgccct-catgtggagggctccacgccagcttctgtgatgacagaggtgaatactaccggctgcttgtcctcgagcacgtacaatgtaacaaacttgtaaataaaataagcacattataatacagcatgttaagtgttacaacagaaacacaag----------------------agacc-agaaaatcagcacctctgtagggaatctgatgaa----gtcat---ggagaggtgccatctgaactgggct---------------------------------------ttgag s panTro5.chr3 2529556 292 - 202621043 CTGAAAG---------TTTCGGG-------GCTCACGTGGCCCACCATT-GTCCcagtcactcagcaaacacatcagtgccct-catgtggagggctccacgccagcttctgtgatgacagaggtgaataccaccggctgcttgtcctcgagcacgtacaatgtaacaaacttgtaaataaaataagcacattataatacagcatgttaagtgttacaatagaaacacaagtaaa-----------------gagacc-agaaaatcagcacctctgtagggaatctgatgaa----gtcat---ggagaggtgccatctgaactgggct---------------------------------------ttgag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119702 292 - 190779 CTGAAAG---------TTTCGGG-------GCTCACGTGGCCCACCATT-GTCCcagtcactcagcaaacacatcagtgccct-catgtggagggctccacgccagcttctgtgatgacagaggtgaatactaccggctgcttgtcctcgagcacgtacaatgtaacaaacttgtaaataaaataagcacattataatacagcatgttaagtgttacaacagaaacacaagtaaa-----------------gagacc-agaaaatcagcacctctgtagggaatctgatgaa----gtcat---ggagaggtgccatctgaactgggct---------------------------------------ttgag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 70656 287 - 106623 CTGAAAG---------TTTCGGG-------GCTCACGTGGCCCACCATT-GTCCcagtcactcagcaaacacatcagtgccct-catgtggagggctccacgccagcttctgtgatgacagaggtgaatactaccggctgcttgtcctcgagcacgtacaatgtaacaaacgtgtaaataaaataagcacattataatacagcgtgttaagtgttacaacagaaacacaag----------------------agacc-agaaaatcagcacctctgtagggaatctgatgaa----gtcat---ggagaggtgccatctgaactgggct---------------------------------------ttgag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2846032 288 - 123690457 CTGAAAG---------TTTCGGGGCCATCTGCTCACGTGGCCCACCATG-GTCCCAGTCACTCAGCAAACACATCGTTGCCCT-GATGTGGAGGGCTCCACGCTAGCTTCTGTGATGACAGAGGT-----------GCTGCTTGTCCTAGAGCACGTACAATGTAacaaacttgtaaataaaataagcacattatagtacagcatgttaagtgttacaacagaaacacatgtaaa-----------------gagacc-agaaaatcagcacccctgcagggaatctgacgaa----gtcat---ggagaggtgccatctgaactgggct---------------------------------------ttcag i nomLeu3.chr11 I 11 C 0 s rheMac8.chr2 2342987 299 - 204787373 CTGAAAG---------TTTCAGGGCCATCTGCTTATGTGACCCACCATT-GTCCCAGTCACTCTGCAAACACATCAGTGCCCT-CAGGTGGAGGGCTCCAtgctagcttctgtgatgacagaggtgaatactactgactgcttgtcctagagcacctacaatgtaacaaacttgtaaataaaataagcacattattgtacagcatgttaagtgttataacagaaacacaagtaaa-----------------gagacc-agaaaatcagcacctctgtagggaatctgacgaa----gtcat---agagaggtgccacctgaactgggct---------------------------------------ttgag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192408152 299 - 192460366 CTGAAAG---------TTTCAGGGCCATCTGCTTATGTGGCCCACCATT-GTCCCAGTCACTCTGCAAACACATCAGTGCCCT-CAGGTGGAGGGCTCCAtgctagcttctgtgatgacagaggtgaatactactgactgcttgtcctagagcacctacaatgtaacaaacttgtaaataaaataagcacattattgtacagcatgttaagtgttataacagaaacacaagtaaa-----------------gagacc-agaaaatcagcacctctgtagggaatctgacgaa----gtcat---ggagaggtgccacctgaactgggct---------------------------------------ttgag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19147426 299 - 19675229 CTGAAAG---------TTTCAGGGCCATCTGCTTATGTGGCCCACCATT-GTCCCAGTCACTCTGCAAACACATCAGTGCCCT-CAGGTGGAGGGCTCCAtgctagcttctgtgatgacagaggtgaatactactgactgcttgtcctagagcacctacaatgtaacaaacttgtaaataaaataagcacattattgtacagcatgttaagtgttataacagaaacacaagtaaa-----------------gagacc-agaaaatcagcacctctgtagggaatctgacgaa----gtcat---ggagaggtgccacctgaactgggct---------------------------------------ttgag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16384027 299 - 16847902 CTGAAAG---------TTTCAGGGCCATCTGCTTATGTGGCCCACCATT-GTCCCAGTCACTCTGCAAACACATCAGTGCCCT-CAGGTGGAGGGCTCCAtgctagcttctgtgatgacagaggtgaatactactgactgcttgtcctagagcacctacagtgtaacaaacttgtaaataaaataagcacattattgtacagcatgttaagtgttataacagaaacacaagtaaa-----------------gagacc-agaaaatcagcacctctgtagggaatctgacgaa----gtcat---ggagaggtgccacctgaactgggct---------------------------------------ttgag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91354385 299 + 91754291 CTGAAAG---------TTTCAGGGCCATCTGCTTATGTGGCCCACCATT-GTCCCAGTCACTCTGCAAACACATCAGTGCCCT-CAGGTGGAGGGCTCCAtgctagcttctgtgatgacagaggtgaatactatcggctgcttgtcctagagcacctaaaatgtaacaaacttgtaaataaaataagcacattatagtacagcatgttatgtgttataacagaaacacaagtaaa-----------------gagacc-agaaaatcagcacctctgtagggaatctgacgaa----gtcat---ggagaggtgccacctgaactgggct---------------------------------------ttgag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1420638 299 + 1977891 CTGAAAG---------TTTCAGGGCCATCTGCTTATGTGGCCCACCATT-GTCCCAGTCACTCTGCAAACACATCAGTGGCCT-CAGGTGGAGGGCTCCAtgctagcttctgtgatgacagaggtgaatactactgactgcttgtcctagagcacctacagtgtaacaaacttgtaaataaaataagcacattattgtacagcatgttaagtgttataacagaaacacaagtaaa-----------------gagacc-agaaaatcagcacctctgtagggaatctgacgaa----gtcat---ggagaggtgccacctgagctgggct---------------------------------------ttgag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7359943 299 - 7796314 CTGAAAG---------TTTCAGGGCCATCTGCTTATGTGGCCCACCATT-GTCCCAGTCACTCTGCAAACACATCAGTGCCCT-CAGGTGGAGGGCTCCAtgctagcttctgtgatgacagaggtgaatactaccggctgcttgtcctagagcacctacaatgtaacaaacttgtaaataaaataagcacattatagtacagcatgttaagtgttataacagaaccacaagtaaa-----------------gagacc-agaaaatcagcacctctgtagggaatctgatgaa----gtcat---ggagaggtgccacctgaactgggct---------------------------------------ttgag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73833750 280 + 74750902 CTGCAAG---------TTTTGGGGCCACCTGCTCACGTGGCCCGCCATTCGTCTCGGTCACTCAGCCAACACATCAGCGCCCT-CATGTGGAGGGCTCCATGCTAGCTTCTGTGAAGAC--TGGCGAAGACTGGCGGCTGCTTGTCCCA-------------GTAACAAACTTGTAAATAAAATAAGCACTTTATAATACAGCATGTTCCGAGTT-----AGAAACACAAGTAAA-----------------GAGATC-AGGAAATCAGTGCCTCTGCAgggaatctgacaaa----gtcat---ggagaggtgccatctgaactgggct---------------------------------------ttgag i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17280265 263 - 17725628 CTGCAAG---------TTTTGGGGTCACCTGCTCACATGGCCCGCTGTGCGTCT--GTCACTCAGCCAAGACCTCGGCGCCCT-CACGTGGAGGGCTCCATGGCACCTTCCGTGAagac--cggcgaat---------------------------------gtaacaaacttgtaaataaaataagcacattgtaacacagcacgttcagtgttataacagaaacacaagtaaa-----------------aagatc-aggaaatccgcacctctgcggggaatctgacaaa----gtcat---ggagaggtgccatctgaactgggct---------------------------------------ttgag i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6369941 292 + 6778120 CT-CAAC---------TTTTGGGGCCATCTGCTCACGTGGCCCGCCATTCATCT--GTCACTCAGCCAAGACATCAGC-CCCT-CATGTGGAGGGctctatgccagcttctgtgaagac--tggtgaatactagcggccgcttgtcccagagcacgtgcaatgtaacaaacttgtaaataaaataagcacattgtaatacagcgtgttcggtgtcataacagaaacacaagtaaa-----------------gagatc-aggaaatcagcgcctctgcagggaatctgac--a----gtcat---ggagaggtgccatctgaactgggct---------------------------------------ttgag i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 204026 264 + 608964 ----AGGGT--CCCTCTCTCCGGGCTATCTGTTCACACAGCCCATCATCTATCTCAGTTGTTCAGCCAACAAGTGAGTACTCT-CACCT-TAGGGCTCCAGgctgggttctgtaactacagagatgaacact----ggttcctgtcccaaagcacatgcaatttaacagatgtgtaagtaaa---------ttacaatacaGCACAT-------------------------AAA-----------------GAGATT-AAGAAATCAGCCCCTTCCTAGGGGATCTGACAAA----GTCAT---GAAGAGGTGCCATCTAAACTGGACT---------------------------------------TCTAA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2318095 294 - 31377067 -------GTGCCCATATTTCATGGTCACCTGCTCACGTGGCCCATC----CTCtcagttatgcagcgaacagctgagtatcctccaggtacagagctctgcactaggttctgtggctacagggaggagtaccgcatggcacctgtcctgaagcacagatgacttaaccaactcataagcgaatgaagcagg-----atgtagtatgttaagtgtcataacagaaaca----taaa-----------------gggacg-atgaaactagaccctcctcagggaatttgaggaaagccaccac---aaggaggcaccgaatgaactgggcc---------------------------------------tctaa i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2696932 317 - 6579706 -------------------------TGTCTGCTCATG-GGTCCACC----ATCtcagtcacacagcagacat-tca----cct-c---------tctctgtactaggctctatggctacagagatgaagaattcatggtgctcgttcggaagcacttacagtttagcaaacttgtaaataaaa--------ttataatatagcatgttgcatgctgtaacagaaatagaaacaaagtgttaggggagcccaggagactgagaaacccagcccctccccagggagttgaggaaa----gccatcagaaggaggggccatctgaactgagctgctaagaacgaatagggggaacaaatgtggctcaggcagttggg i dasNov3.JH569502 C 0 I 158 e proCoq1.NW_012133858v1 14791139 1083 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88383870 367 + 114275543 I a score=640035.000000 s hg38.chr3_KI270934v1_alt 57662 67 + 163458 gaatgaataggagttttccaggtgaagggacca--------------------gggggaggaatcatgatgggcagacgctccagat s panTro5.chr3 2529848 67 - 202621043 gaatgaataggagttttccaggtgaagggacca--------------------gggggaggaatcatgatgggcagaCACTCCAGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119994 67 - 190779 gaatgaataggagttttccaggtgaagggacca--------------------gggggaggaatcatgatgggcagacactccagat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 70943 67 - 106623 gaatgaataggagttttccaggtgaagggacca--------------------ggaggaggaatcatgatgggcagaCACTCCAGAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2846320 66 - 123690457 gaatgaataggagttttccgggtgaagggacc---------------------gggggaagaatcatgatgtgcagacactccacat i nomLeu3.chr11 C 0 I 315 s rheMac8.chr2 2343286 66 - 204787373 gaatgaataggagttttccaggcaaagggacc---------------------aggggaagaatcatgatgtgcagacactccagat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192408451 66 - 192460366 gaatgaataggagttttccaggcaaagggacc---------------------aggggaagaatcatgatgtgcagacactccagat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19147725 66 - 19675229 gaatgaataggagttttccaggcaaagggacc---------------------aggggaagaATCATGATGTGCAGACACTCCAGAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16384326 66 - 16847902 gaacgaataggagttttccaggcaaagggacc---------------------aggggaagaatcatgatgtgcagacactccagat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91354684 66 + 91754291 gaatgaataggagttttccaggcaaagggacc---------------------aggggaagaATCATGATGTGCAGACACTCCAGAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1420937 66 + 1977891 gaatgaataggagttttccaggcaaaggggcc---------------------aggggaagaatcatgatgtgcagacactccagat i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7360242 66 - 7796314 gaatgaataggagttttccaggcaaagggacc---------------------aggggaagaatcatgatgtgcagacactccagat i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73834030 67 + 74750902 gaatgaataggagttttccaaggggagggacaa--------------------gggggacgaatcacgatgggcagaaactccaaat i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17280528 67 - 17725628 gagtgaataggagttttccaggggaagggacaa--------------------gggggacgaatcatggcgggcagaaactccagat i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6370233 64 + 6778120 gaatgagtaggagttttccaggggaagggacaa--------------------gggggacaaat---ggtgggcagaaactccagat i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 204290 42 + 608964 GAATCAAC---------------------------------------------AAGGGAAGAATCACGGTGCGCAGATACCCTGGGG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2318389 87 - 31377067 gcatgaacagaagttttccagatggagggaccagagagcgggagagcatcctgggggcaagagtcatgatgtacaaactctctggat i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2697407 85 - 6579706 GAATGAATAGGAGCTTCCCA-GTAAAGGGACCAGGGGGAGGGAAAATAATCT-GAGGGAGAAATCATGATGTGCAAGCATTTCAGAT i dasNov3.JH569502 I 158 C 0 e proCoq1.NW_012133858v1 14791139 1083 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88383870 367 + 114275543 I a score=754405.000000 s hg38.chr3_KI270934v1_alt 57729 72 + 163458 gaaagcaggtgtgcctggg-gttagcgagctgcttcctgtgcaagcagcataggatatggaagatggggccgt s panTro5.chr3 2529915 72 - 202621043 GAAAGCAGGTGTGCCTGGG-GTTAGCGAGCTGCTTCCTGTGCAAGCAGCATAGGATATGGAAGATGGGGCCGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120061 72 - 190779 gaaagcaggtgtgcctggg-gttagcgagctgcttcctgtgcaagcagcataggatatggaagatggggccgt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 71010 72 - 106623 GAAAGCAGGTGTGCCTGGG-GTTAGAGAGCTGCTTCCTGTGCAAGCAGCATAGGATATGGAAGATGGGGCCGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2846701 72 - 123690457 gaaagcaggtgtgcctggg-gttagcgagctgcttcctgtgcaaggagcataggatatggaagatggggtggc i nomLeu3.chr11 I 315 C 0 s rheMac8.chr2 2343352 72 - 204787373 ggaagcaggtgtgcctggg-gttagcgagctgctccctgtgcaaggagcacaggatatggaagatggggccgc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192408517 72 - 192460366 ggaagcagatgtgcctggg-gttagcaagctgctccctgtgcaaggagcacaggatatggaagatggggccgc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19147791 72 - 19675229 GGAAGCAGGTGTGCCTGGG-GTTAGCGAGCTGCTTCCTGTGCAAGGAGCACAGGATATGGAAGATGGGGCCGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16384392 72 - 16847902 ggaagcaggtgtgcctggg-gttagcgagctgctctctgtgcaaggagcacaggatatggaagatggggccgc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91354750 72 + 91754291 GGAAGCAGGTGTGCCTGGG-GTTAGCGAGCTGCTCCCTGTGCAAGGAGCACAGGATATGGAAGATGGGGCCGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1421003 72 + 1977891 ggaagcaggtgtgcctggg-gttagcgagctgctccctgtgcaaggagcacaggatatggaagatggggccgc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7360308 72 - 7796314 ggaagcaggtgtgcctggg-gttagcgagctgctccctgtgcaaggagcacaggatatggaagatggggcagc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73834097 72 + 74750902 gaaagcaggtgtgcctggg-gttggcgaggtgccccctgtggaaggagcatagaatctggaagatggggtcac i calJac3.chr17 C 0 I 2 s saiBol1.JH378146 17280595 72 - 17725628 gaaaggaggtgtgcgtggg-gttagcgagatgccccctgtggaaggagcacaggatatggaagatggggtcac i saiBol1.JH378146 C 0 I 2 s cebCap1.NW_016107444v1 6370297 72 + 6778120 gaaagcaggtgtgcctggg-gttagcgagatgccccctgtggagggagcataggttatggaggatgggctcac i cebCap1.NW_016107444v1 C 0 I 2 s otoGar3.GL873829 204332 72 + 608964 CAAAGCTGGTGTGAGCAGG-ATTACTGAGAAGCTCCCTGTGGAAGAGGCATAGGAAGCTGGAGATGGGACCTT i otoGar3.GL873829 C 0 I 2 s canFam3.chr33 2318476 73 - 31377067 caaagcaggtatgacagggaagtagtgagaagttacctgtggaagtaacataAGACATAGCAGGCGGGTCTAC i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 2697492 73 - 6579706 CAAAGCGGGTGTGGCCGGATAGTGGTGAGAAGTTTCCTGTGGAAGGAATGTCGGCTGTGGAAGATGGGGCCAT i dasNov3.JH569502 C 0 I 2 e proCoq1.NW_012133858v1 14791139 1083 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88383870 367 + 114275543 I a score=1364193.000000 s hg38.chr3_KI270934v1_alt 57801 118 + 163458 gacctggagctaagatagttggctgaggccatatcatgaagACCCTTGCATACGAAGGTGGGGATTCCATCCTGGAGGTAGGAACAGGAGTAGCTTTGATTTGGGAGAGGAAAG----CTCT s panTro5.chr3 2529987 118 - 202621043 GACCTGGAGCTAAGATAGTTGGCTGAGGCCATATCATGAAGACCCTTGCATACGAAGGTGGGGATTCCATCCTGGAGGTAGGAACAGGAGTAGCTTTGATTTGGGAGAGGAAAG----CTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120133 118 - 190779 gacctggagctaagatagttggctgaggccatatcatgaagACCCTTGCATACGAAGGTGGGGATTCCATCCTGGAGGTAGGAACAGGAGTAGCTTTGATTTGGGAGAGGAAAG----CTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 71082 118 - 106623 GACCTGGAGCTAAGATAGTTGGCTGAGGCCATATCATGAAGACCCTTGCATACAAAGGTGGGGATTCCATCCTGGAGGTAGGAACAGGAGTAGCTTTGATTTGGGAGAGGAAAG----CTCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2846773 118 - 123690457 gacctggagctaagatagttggctgaggccatatcatgaagACCCTTGCATACCAAGGTGGGGGTTTCATCCTGGAGATAGGAACAGGAGTGGCTTTGATTTGGGAGAGGAAAG----CTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2343424 118 - 204787373 cacctggagctaaggtagttggctgaggccgtatcatgaagACCCTTGCATACCAAGGTGGGGATTTCATCCCGGAGGTAGGAACAGGAGTAGCTTTGATTTGGGAGAGGAAGG----CTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192408589 118 - 192460366 gacctggagctaaggtagttggctgaggccgtatcatgaagACCCTTGCATACCAAGGTGGGGATTTCATCCCGGAGGTAGGAACAGGAGTAGCTTTGATTTGGGAGAGGAAGG----CTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19147863 118 - 19675229 CACCTGGAGCTAAGGTAGTTGGCTGAGGCCGTATCATGAAGACCCTTGCATACCAAGGTGGGGATTTCATCCCGGAGGTAGGAACAGGAGTAGCTTTGATTTGGGAGAGGAAGG----CTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16384464 118 - 16847902 gacctggagctaaggtagttggctgaggccgtatcatgaagACCCTTGCATACCAAGGTGGGGATTTCATCCCGGAGGTAGGAACAGGAGTAGCTTTGATTTGGGAGAGGAAGG----CTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91354822 118 + 91754291 GACCTGGAGCTAAGGTAGTTGGCTGAGGCCGTATCATGAAGACCCTTGCATACCAAGGTGGGGATTTCATCCCGGAGGTAGGAATAGGAGTAGCTTTGATTTGGGAGAGGAAAG----CTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1421075 118 + 1977891 gacctggagctaaggtagttggctgaggccgtatcatgaagACCCTTGCATACCGAGGTGGGGATTTCATCCCGGAGGTAGGAATAGGAGTAGCTTTGATTTGGGAGAGGAAGG----CTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7360380 118 - 7796314 aacctggagctaaggtagttggctgaggccgtatcatgaagACCCTTGCATACCAAGGTGGGGATTTCATCCCAGAGGTAGGAATAGGAGTAGCTTTGATTTGGGAGAGGAAGG----CTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73834171 118 + 74750902 aacctggaactaaggaagttggctgaggccaaatcttgaagGCCCTTGCACACCAAGGTGGGGATTTCATCCTGGAGGTGGGAAGAGGAGTAGCTTTGATTTGGGAGAGAAAAG----CTCT i calJac3.chr17 I 2 C 0 s saiBol1.JH378146 17280669 118 - 17725628 agcctggagctaatgaagctggctgaggccaaaccttgaggGCCCTTGCACACCAAGGTGGGGATTTCATCCTGGAGGTGGGAACAGGAGTAGCTTTGATTTGGGAGAGAAAAG----CTCT i saiBol1.JH378146 I 2 C 0 s cebCap1.NW_016107444v1 6370371 120 + 6778120 aacctggagctaaggaagttggctgaggccaaatcttgaagGCCCTTGCACACCAAGGTGGGGATTTCATCCTGGAGGTGGGAGCAGGAGTAGCTTTGATTTAGGAGAGAAAAG--CTCTCT i cebCap1.NW_016107444v1 I 2 C 0 s micMur3.chr1 88384237 116 + 114275543 GACCTGGAGCTGAGGGAGTTGGCTGAGGCCATATGCCAAAGACCCTTCTATACCAAGCTGGGG--TTTATCCTGTAGGTAGGAACAGGAATAGTTTTGATTTTAGACAGGAAAG----CTCT i micMur3.chr1 I 367 I 450 s otoGar3.GL873829 204406 101 + 608964 AATCTGGAATTGAGGATGCTGGCACAGG---------------CCTTGTATA-CAAGCTGAGG-TTTTATCCTGTAGGTAGGAACAGGAATAGCTTTGATTTTAGAGAGGAAAG----CTCT i otoGar3.GL873829 I 2 C 0 s canFam3.chr33 2318551 102 - 31377067 GACACAGAGCTGGG-----------AACCCTGATCACGAGGACCCTGATATACAAGGCTGGGAGTTTTGTTCCTTTGGTAGGAACAGGACTAGC-----TTTTGGAAAGGGAGC----CCTT i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 2697567 115 - 6579706 GACACAGAGCTGGGGAAACTGGCCAA-------TCAGGAAGACCCTTATATACCAAGCTGGGTATTGTGCCCGGTAGGTAGGAATAGGACTCACTTTGATTTGGAAGAGGAAAGAAAGCTCT i dasNov3.JH569502 I 2 C 0 e proCoq1.NW_012133858v1 14791139 1083 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I a score=139430.000000 s hg38.chr3_KI270934v1_alt 57919 18 + 163458 GCAGATGGTG------------------------TAAAAGGT s panTro5.chr3 2530105 18 - 202621043 GCAGATGGTG------------------------TAAAAGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120251 18 - 190779 GCAGATGGTG------------------------TAAAAGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 71200 18 - 106623 GCAGATGGTG------------------------TAAAAGGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2846891 18 - 123690457 GGAGATGGTG------------------------TAAAAGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2343542 17 - 204787373 -GAGATGGTA------------------------TAAAAGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192408707 17 - 192460366 -GAGATGGTA------------------------TAAAAGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19147981 17 - 19675229 -GAGATGGTA------------------------TAAAAGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16384582 17 - 16847902 GGAGATGGTA------------------------TAAAAGG- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91354940 17 + 91754291 GGAGATGGTA------------------------TAAAAGG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1421193 17 + 1977891 GGAGATGGTA------------------------TAAAAGG- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7360498 18 - 7796314 GGAGATGGTA------------------------TAAAAGGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73834289 18 + 74750902 AGAGATAGTG------------------------TAAAAGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17280787 18 - 17725628 AGACATAGTG------------------------TAAAAGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6370491 18 + 6778120 AGAGATAGTG------------------------TAAAAGGT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 204507 42 + 608964 AGAGATAGTGAAAGGCAGTCTGAAATGAAAACCAAAAAAGGT i otoGar3.GL873829 C 0 I 202 s canFam3.chr33 2318653 18 - 31377067 AAAGACAGTG------------------------TGAAAGGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2697682 18 - 6579706 GGCAGCAATA------------------------GGAAGGGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14791139 1083 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88384353 450 + 114275543 I a score=84967.000000 s hg38.chr3_KI270934v1_alt 57937 10 + 163458 AGGTTGGAGT s panTro5.chr3 2530123 10 - 202621043 AGGTTGGAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120269 10 - 190779 AGGTTGGAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 71218 10 - 106623 AGGTTGGAGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2846909 10 - 123690457 AGCTTGGAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2343559 10 - 204787373 AGCTTGGAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192408724 10 - 192460366 AGCTTGGAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19147998 10 - 19675229 AGCTTGGAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16384599 7 - 16847902 ---TTAGAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91354957 7 + 91754291 ---TTAGAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1421210 7 + 1977891 ---TTAGAGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7360516 10 - 7796314 AGCTTGGAGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73834307 10 + 74750902 AGCTTGGAGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17280805 10 - 17725628 AGCTTGGAGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6370509 10 + 6778120 AGCTTGGAGT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 204751 10 + 608964 aatttgaggt i otoGar3.GL873829 I 202 C 0 s canFam3.chr33 2318671 9 - 31377067 -ACTTGGGAa i canFam3.chr33 C 0 I 37 s dasNov3.JH569502 2697700 10 - 6579706 GGTTTGGCAT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14791139 1083 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88384353 450 + 114275543 I a score=26673.000000 s hg38.chr3_KI270934v1_alt 57947 16 + 163458 T-------------------------------------------------------------------AAAAAAA-TTTTTTTT s panTro5.chr3 2530133 16 - 202621043 T-------------------------------------------------------------------AAAAAAA-ATTTTTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120279 16 - 190779 T-------------------------------------------------------------------AAAAAAA-ATTTTTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 71228 17 - 106623 T------------------------------------------------------------------AAAAAAAA-ATTTTTTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2846919 15 - 123690457 T-------------------------------------------------------------------AAAAAAA-A-ATTTTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2343569 16 - 204787373 T-------------------------------------------------------------------AAAAAAA-TTTTTTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192408734 16 - 192460366 T-------------------------------------------------------------------AAAAAAA-TTTTTTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19148008 16 - 19675229 T-------------------------------------------------------------------AAAAAAA-ATTTTTTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16384606 17 - 16847902 T-------------------------------------------------------------------AAAAAAATTTTTTTTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91354964 18 + 91754291 T-----------------------------------------------------------------AAAAAAAAA-ATTTTTTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1421217 17 + 1977891 T------------------------------------------------------------------AAAAAAAA-TTTTTTTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7360526 16 - 7796314 T-------------------------------------------------------------------AAAAAAA-ATTTTTTT i colAng1.NW_012118932v1 C 0 I 327 s calJac3.chr17 73834317 13 + 74750902 T-------------------------------------------------------------------TAAAAAA-ATGTT--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17280815 12 - 17725628 T-------------------------------------------------------------------TAAAAAC-AT-TT--- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6370519 13 + 6778120 T-------------------------------------------------------------------TAAAAAA-TTTTT--- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 204761 83 + 608964 tgtgtgagtgaggctgatgctattacactctagcctggacaaaagagtgagactctgtatcaaaaaaataaaaaa-aTTTTTTA i otoGar3.GL873829 C 0 I 1 s dasNov3.JH569502 2697710 14 - 6579706 -------------------------------------------------------------------GAAAAAGA-CTGTTT-- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14791139 1083 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88384353 450 + 114275543 I e canFam3.chr33 2318680 37 - 31377067 I a score=178403.000000 s hg38.chr3_KI270934v1_alt 57963 27 + 163458 AAGTT------CCATTTTAAGAAAA-AAGA--AGAT s panTro5.chr3 2530149 29 - 202621043 AAGTT------CCATTTTAAGAAAA-AAGAGAAGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120295 29 - 190779 AAGTT------CCATTTTAAGAAAA-AAGAGAAGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 71245 29 - 106623 AAGTT------CCATTTTAAGAAAA-AAGGGAAGAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2846934 30 - 123690457 AAGTT------TGATTTtaagaaaataagagaagat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2343585 29 - 204787373 -AGTT------CCACTTTTAGAAAATAAGAGAAGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192408750 29 - 192460366 -AGTT------CCACTTTTAGAAAATAAGAGAAGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19148024 29 - 19675229 -AGTT------CCACTTTTAGAAAATAAGAGAAGAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16384623 29 - 16847902 -AGTT------CCATTTTTAGAAAATAAGAGAAGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91354982 29 + 91754291 -AGTT------CCATTTTTAGAAAATAAGAGAAGAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1421234 29 + 1977891 -AGTT------CCATTTTTAGAAAATAAGAGAAGAT i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73834330 30 + 74750902 AAGTT------CCGTTTTAAGAAAATAAGAGAAGAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17280827 30 - 17725628 AAGTT------CCATTTTAAGAAAATAAGAGAAGAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6370532 25 + 6778120 AAGTT------CCATTTTAAGAAAAT-----AAGAT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 204845 36 + 608964 AAGATTGGAAACTATTTTTTTAAAAAATGAGAAGAC i otoGar3.GL873829 I 1 C 0 s dasNov3.JH569502 2697724 20 - 6579706 -----------CATCTTTTTAAGAATGAGAG----- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14791139 1083 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88384353 450 + 114275543 I e canFam3.chr33 2318680 37 - 31377067 I e colAng1.NW_012118932v1 7360542 327 - 7796314 I a score=769315.000000 s hg38.chr3_KI270934v1_alt 57990 89 + 163458 AAAATAACATTTCATGAATTTTTTTCTGTCCTAATAAATATATGTTTCAACAATGCTTCTGTAGCTTGCGTAAAATAACGCTATAGTGT s panTro5.chr3 2530178 89 - 202621043 AAAATAACATTTCATGAACTTTTTTCTGTCCTAATAAATATATGTTTCAACAATGCTTCTGTAGCTTGCGTAAAATAACACTATAGTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120324 89 - 190779 AAAATAACATTTCATGAACTTTTTTCTGTCCTAATAAATATATGTTTCAACAATGCTTCTGTAGCTTGCGTAAAATAACACTATAGTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 71274 89 - 106623 AAAATAACATTTCATGAACTTTTTTCTGTCCTAATAAATATATGTTTCAACAATGCTTCTGTAGCTTGCGTAAAATAACACTATAGTGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2846964 89 - 123690457 aaaataatatTTCATGAACTTTTTTCCATCCTAATAAATATATGTTTCAACAACGCTTCTGTAGCTTGCGTAAAATAACACTACAGTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2343614 85 - 204787373 AAAATAATATTTCATGAACTTTTTTCCATCTT----AATACATGTTTCAACAACGCTTCTGTAGCTCGCAAAAAATAACACTATAATGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192408779 85 - 192460366 AAAATAATATTTCATGAACTTTTTTCCATCTT----AATACATGTTTCAACAACGCTTCTGTAGCTTGCAAAAAATAACACTATAGTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19148053 85 - 19675229 AAAATAGTATTTCATGAACTTTTTTCCATCTT----AATACATGTTTCAACAACGCTTCTGTAGCTTGCAAAAAATAACACTATAGTGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16384652 89 - 16847902 AAAATAATATTTCATGAACTTTTTTCCATCTTAATAAATACATGTTTCAACAACGCTTCTGTAGCTTACAAAAAATAACACTATAGTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91355011 89 + 91754291 AAAATAATATTTCATGAACTTTTTTCCATCTTAATAAATACATGTTTAAACAACGCTTCTGTAGCTTACAAAAAATAACACTATAGTGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1421263 89 + 1977891 AAaataatattccatgaacttttttccatcttaataaatacatgtttcaacaacgcttctgtagcttacaaaaaataacactatagtgt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7360869 89 - 7796314 AAAATAATATTTCATGCACTTTTTTCCATCTTAATAAATACATGTTTCAACAACTCTTCTGTAGCTTGCAAAAAATAATACTATAGTGT i colAng1.NW_012118932v1 I 327 C 0 s calJac3.chr17 73834360 85 + 74750902 AAAATAATATTTCATGAACTTCTCTCCATCTTAATAAATAC--GTTTCAACAAAACTTC--TAGATTATGCAAAGTAACACTACAATGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17280857 86 - 17725628 AAAATAACATTTCATGAACTTCTTTCCATCTTAATAGACAC--GTTTCCACACGACTTCTATAGACTGCGTAAAATAACACTGT-ATGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6370557 86 + 6778120 AAAATAATATTTCATGAACTTCTTTCCATCTTAATAAACAC--ATTTCAACACGACTTCTATAGACTGTGTAAAATAACACTAT-ATGT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 204881 86 + 608964 AAAACAATATTTCATAAACTTCTTTCCATCTTTATAAATATATATCTTAATAACACTTCCATGGTTTATATAAAATAACACTATA---T i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2697744 84 - 6579706 AACAAaatattccatgaacctctttccatgttaataaatatgcttctcaacaatacttctacagtct--ataaaacaacagtatat--- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14791139 1083 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88384353 450 + 114275543 I e canFam3.chr33 2318680 37 - 31377067 I a score=607951.000000 s hg38.chr3_KI270934v1_alt 58079 64 + 163458 TTAAGCAAACTGTTACATGGGGAGATTTGAGGTTACTTGTGTTTTGTTTTGCC-TTTTTCATCTA s panTro5.chr3 2530267 64 - 202621043 TTAAGCAAACTGTTACATGGGAAGATTTGAGGTTACTTGTGTTTTGTTTTGCC-TTTTTCATCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120413 64 - 190779 TTAAGCAAACTGTTACATGGGAAGATTTGAGGTTACTTGTGTTTTGTTTTGCC-TTTTTCATCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 71363 64 - 106623 TTAAGCAAACTGTTACATGGGGAGATTTGAGGTTACTTGTGTTTTGTTTTGCC-TTTTTCATCTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2847053 64 - 123690457 TTAAGCAAACTGTTACTTGGGGAGATTTGAGGTTATTTGTGTTTTGTTATGTC-TTTTTCATCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2343699 64 - 204787373 GTAAGCAAACTGTTACATAGGGAGATTTTAGGTTATTTGTGTTTCATTTTGTC-TTTTTCATCTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192408864 64 - 192460366 GTAAGCAAACTGTTACATAGGGAGATTTTAGGTTATTTGTGTTTCATTTTGTC-TTTTTCATCTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19148138 64 - 19675229 GTAAGCAAACTGTTACATAGGGAGATTTTAGGTTATTTGTGTTTCATTTTGTC-TTTTTCATCTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16384741 64 - 16847902 TTAAGCAAACTGTTACATGGGGAGATTTTAGGTTATTTGTGTTTCCTTTTGTC-TTTTTCATCTA i cerAty1.NW_012004056v1 C 0 I 342 s chlSab2.chr15 91355100 64 + 91754291 TTAAGCAAACTGTTACATGGGGAGATTTTAGGTTATTTGTGTTTCATTTTGTC-TTTTTCATCTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1421352 64 + 1977891 ttaagcaaactgttacatggggagattttaggttatttgtgtttcattttgtc-tttttcatcta i manLeu1.NW_012102020v1 C 0 I 34 s colAng1.NW_012118932v1 7360958 64 - 7796314 TTAAGCAAACTGTGACATGGGGAGATTTTAGGTTATTTGTGTTTCATTTTGTC-TTTTTCATCTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73834445 63 + 74750902 TTAACCAAAGTGTCACGC-GGGAGATTTTAGGTTATTTGTGTTTCGTTTTGTC-TTTTTCATCTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17280943 64 - 17725628 TTAACCAAAGTGTTATATGGGGGGATTTTAGGTGAACTGTGTTTCATTTTGTC-TTTTTCATCTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6370643 64 + 6778120 TTAACCAAAGTGTTACGTGGGGAGATTTTAGGTCATTTGTGTTTCGTCTTGTC-TTTTTCATCTA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 204967 52 + 608964 TTAACCAAATGATTACATTGGGATATCTTAAGTTA------------TTTGTC-TTTTTCTTTTA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2318717 49 - 31377067 TTAACCAAATGACTACACTGAgacatttt----------------gttttgtcttttttccttta i canFam3.chr33 I 37 C 0 s dasNov3.JH569502 2697828 58 - 6579706 ttaatcaaactgctatgttgggatatctcaggtaatttctgtatt------tc-ttccttattta i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14791139 1083 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88384353 450 + 114275543 I a score=93744.000000 s hg38.chr3_KI270934v1_alt 58143 15 + 163458 TGAGTTATTGTAAAC s panTro5.chr3 2530331 15 - 202621043 TGAGTTATTGTAAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120477 15 - 190779 TGAGTTATTGTAAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 71427 15 - 106623 TGAGTTATTGTAAAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2847117 15 - 123690457 TTAGTTGTTATAAAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2343763 14 - 204787373 TTAGTTGTTATAAA- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192408928 14 - 192460366 TTAGTTGTTATAAA- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19148202 14 - 19675229 TTAGTTGTTATAAA- i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91355164 14 + 91754291 TTAGTTGTTATAAA- i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7361022 14 - 7796314 TTAGTTGTTATAAA- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73834508 15 + 74750902 TTGGTTGTTATAAAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17281007 15 - 17725628 CTGGTTGTTATAAAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6370707 15 + 6778120 TTGGTTGTTATAAAC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 205019 15 + 608964 TTGGGTGTTATAAAC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2318766 15 - 31377067 ttagctgttataaac i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2697886 15 - 6579706 gttgttgttataagt i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14791139 1083 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88384353 450 + 114275543 I e manLeu1.NW_012102020v1 1421416 34 + 1977891 I e cerAty1.NW_012004056v1 16384805 342 - 16847902 I a score=16305.000000 s hg38.chr3_KI270934v1_alt 58158 3 + 163458 AGT s panTro5.chr3 2530346 3 - 202621043 AGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120492 3 - 190779 AGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 71442 3 - 106623 AGT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2343777 3 - 204787373 AAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192408942 3 - 192460366 AAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19148216 3 - 19675229 AAT i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 91355178 3 + 91754291 AAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1421450 3 + 1977891 aat i manLeu1.NW_012102020v1 I 34 C 0 s colAng1.NW_012118932v1 7361036 3 - 7796314 AAT i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 205034 3 + 608964 AAT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2318781 3 - 31377067 agt i canFam3.chr33 C 0 I 29 s dasNov3.JH569502 2697901 3 - 6579706 agt i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14791139 1083 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88384353 450 + 114275543 I e saiBol1.JH378146 17281022 0 - 17725628 C e calJac3.chr17 73834523 0 + 74750902 C e cebCap1.NW_016107444v1 6370722 0 + 6778120 C e cerAty1.NW_012004056v1 16384805 342 - 16847902 I e nomLeu3.chr11 2847132 0 - 123690457 C a score=378488.000000 s hg38.chr3_KI270934v1_alt 58161 40 + 163458 ---------------------------TAGGCACAGATTCTAAattacttccttaagataaatcagt s panTro5.chr3 2530349 40 - 202621043 ---------------------------TAGGCACAGATTCTAAattacttccttaagataaatcagt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120495 40 - 190779 ---------------------------TAGGCACAGATTCTAAattacttccttaagataaatcagt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 71445 40 - 106623 ---------------------------TAGGCACAGATTCTAAattacttccttaagataaatcagt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2847132 38 - 123690457 ----------------------------AGgcacagattcttaattacttcctt-agataaatcagt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2343780 40 - 204787373 ---------------------------TAGGCAGGGattcttaattacttccttaagataaatcagt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192408945 40 - 192460366 ---------------------------TAGGCACGGattcttaattacttccttaagataaatcagt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19148219 40 - 19675229 ---------------------------TAGGCACGGattcttaattacttccttaagataaatcagt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16385147 40 - 16847902 ---------------------------TAGgcacagattcttaattacttccttaagataaatcagt i cerAty1.NW_012004056v1 I 342 C 0 s chlSab2.chr15 91355181 40 + 91754291 ---------------------------TAGgcacagattcttaattacttccttaagataaatcagt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1421453 40 + 1977891 ---------------------------taggcacagattcttaattacttccttaagataaatcagt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7361039 40 - 7796314 ---------------------------TAGgcacagattcttaattacttccttaagataaatcagt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73834523 38 + 74750902 ----------------------------AGGCACAGATGCTtaatta-ttccttaaggtaaaccact i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17281022 39 - 17725628 ----------------------------AGgcacagattattaattatttccttaaggtaaaccagt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6370722 39 + 6778120 ----------------------------AGgcacagattattaattatttccttaaggtaaaccagt i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 205037 38 + 608964 -----------------------------TCTGTAGACTCTTAACTATTTCTTTAGGATAAACCAGG i otoGar3.GL873829 C 0 I 276 s canFam3.chr33 2318813 40 - 31377067 ---------------------------tttgcacagattcctaattatttctttaagataaaccctt i canFam3.chr33 I 29 I 3 s dasNov3.JH569502 2697904 67 - 6579706 tctacaatgaatgtgtttatattggtctttgcacagatccttagttattgccttaaggtatatttct i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14791139 1083 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88384353 450 + 114275543 I a score=2946790.000000 s hg38.chr3_KI270934v1_alt 58201 332 + 163458 aacgaaactgctgagttaaaggtatgtacatttttcgggctttaaataaatcagttaaattgtcctccggaaaggttgtaccaattt-cttccctactaggagtgtttaagaatgcccgtttgcccagcaccc--------------------agtatagatcagtac----a------------------------gacat----------------------------------acaataagcaatatctcactgtatt-aatggac-------ctgtttttgc-tactgaagtcacacgttctttttca-------tggggggtggtggcgggaggagaggacatttgtatttcttcttttgtgaatta----------------cctg---ttgccat-----------------------------------------------------ttaccca--------------------------------------------tttttctactggtacgtttgcc--------tttttattttcttgcgctg s panTro5.chr3 2530389 332 - 202621043 aacgaaactgctgagttaaaggtatgtacatttttcgggctttaaataaatcagttaaattgtcctccggaaagattgtaccaattt-cttccctactaggagtgtttaagaatgcccatttgcccagcaccc--------------------agtatagatcagtac----a------------------------gacat----------------------------------acaataagcaatatctcactgtatt-aatggac-------ctgtttttgc-tactgaagtcacacgttctttttca-------tggggggtggtggcgggaggagaggacatttgtatttcttcttttgtgaatta----------------cctg---ttgccat-----------------------------------------------------ttaccca--------------------------------------------tttttctactggtatgtttgcc--------tttttattttcttgcgctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120535 332 - 190779 aacgaaactgctgagttaaaggtatgtacatttttcgggctttaaataaatcagttaaattgtcctccggaaagattgtaccaattt-cttccctactaggagtgtttaagaatgcccatttgcccagcaccc--------------------agtatagatcagtac----a------------------------gacat----------------------------------acaataagcaatatctcactgtatt-aatggac-------ctgtttttgc-tactgaagtcacacattctttttca-------tggggggtggtggcgggaggagaggacatttgtatttcttcttttgtgaatta----------------cctg---ttgccat-----------------------------------------------------ttaccca--------------------------------------------tttttctactggtatgtttgcc--------tttttattttcttgcgctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 71485 323 - 106623 aacgaaactgctgagttaaaggtatgtacatttttcgggctttaaataaatcagttaaattgtcctccggaaag---gtaccaattt-cttcccgactaggagtgtttaagaatgcccgtttgcccagcaccc--------------------agtatagatcagtac----a------------------------gacat----------------------------------acaataagcaatatctcactgtatt-aatggac-------ctgtttttgc-tactgaagtcacacgttctttttca-------tggggggcggtggcgggaggagaggac------atttcttcctttgtgaatta----------------cctg---ttaccat-----------------------------------------------------ttaccca--------------------------------------------ttttcctactggtatgtttgcc--------tttttattttcttgcgctg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2847170 331 - 123690457 aacgaaactgctgagttaaaagtatgtacatttttcgggctttaaataaatcagttaaattgtcctccggaaaggctgtaccaattt-ctttcctactaggagtgtttaagaatgcccatttgcccagcgccc--------------------agcatagatcagtac----a------------------------gacat----------------------------------acaataagcaatatctcactgtatt-aatgggc-------ctgtttttgc-tactgaagtcacacgttctttttca-------tggggggtggtggtgggaggagaggacatttgtatttcttcttttgtgaatta----------------cctg---ttgccat-----------------------------------------------------ttatcca--------------------------------------------tttttctactggtgtgtttgcc--------ttttt-ttttcttgctctg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2343820 338 - 204787373 cacgaaactgctgagttaaa-gtgtgtacatttttcaggctttaaataaatcagttaaattgtcctccagaaaggctgtaccaattt-ctttcctcctaggagtgtttgagaacgcccgtttgcccagcaccc--------------------agtacggatcagtac----a------------------------gacat----------------------------------gcaacaagcaatttctcactgtatt-aatggac-------ctgtttttgt-tagtgaaatcacacgttctttttcatt-----gcgggggtggtggtgggaggagaggacatttgtatttctttttttgtgaacta----------------cctg---ttgccct-----------------------------------------------------ttatcca--------------------------------------------tttttctactggtgtgttcgcc---tttttttttttttttcttgctctg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192408985 338 - 192460366 cacgaaactgctgagttaaa-gtgtgtacatttttcaggctttaaataaatcagttaaattgtcctccagaaaggctgtaccaattt-ctttcctcctaggagtgtttgagaacgcccgtttgcccagcaccc--------------------AGTACGGATCAGTAC----A------------------------GACAT----------------------------------GCAACAAGCAATTTCTCACTGTATT-AATGGAC-------CTGTTTTTGT-TAGTGAAATCACACGTTCTTTTTCATT-----GCGGGGGTGGTGGTGGGAGGAGAggacatttgtatttcttcttttgtgaacta----------------cctg---ttgccct-----------------------------------------------------ttatcca--------------------------------------------tttttctactggtgtgttcgcc---tttttttttttttttcttgctctg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19148259 336 - 19675229 cacgaaactgctgagttaaa-gtgtgtacatttttcaggctttaaataaatcagttaaattgtcctccagaaaggctgtaccaattt-ctttcctcctaggagtgtttgagaacgcccgtttgcccagcaccc--------------------agtacggatcagtac----a------------------------gacat----------------------------------gcaacaagcaatttctcactgtatt-aatggac-------ctgtttttgt-tagtgaaatcacacgttctttttcatt-----gcgggggtggtggtgggaggagaggacatttgtatttcttcttttgtgaacta----------------cctg---ttgccct-----------------------------------------------------ttatcca--------------------------------------------tttttctactggtgtgttcgcc-----tttttttttttttcttgctctg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16385187 340 - 16847902 cacaaaactgctgagttaaa-gtaggtacatttttcaggctttaaataaatcagttaaattgtcctccagaaaggctgtaccaattt-ctttcctcctaggagtgtttgagaacgcccgtttgcccagcaccc--------------------ggtacggatcagtac----a------------------------gacat----------------------------------acaataagcaatttctcactgtatt-aatggac-------ctgtttttgt-tagtgaaatcacacgttctttttcactggggagggggggcagtggcgggaggagaggacatttgtatttcttcttttgtgaatta----------------cctg---ttgccct-----------------------------------------------------ttatcca--------------------------------------------tttttccactggtgtgtttgcc------ttttttttttttcttactctg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91355221 341 + 91754291 cacgaaactgctgagttaaa-gtatgtacatttttcaggctttaaataaatcggttaaattgtcctccagagaggctgtgccaattt-ctttcctcctaggagtgtttgagaatgcccgtttgcccagcaccc--------------------AGTACGGATCAGTAC----A------------------------GACAA----------------------------------GCAACAAGCAATTTCTCACTGTATT-AATGGAC-------CTGTTTTTGT-TAGTGAAATCACACGTTCTTTTTCACT-----GGGGGGGTGGTGGCGGGAGGAGAggacatttgcccctttccttttgtgaatta----------------cctg---ttgccct-----------------------------------------------------ttatcca--------------------------------------------tttttccactggtgtttttgccttttttttttttttttttcttactctg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1421493 340 + 1977891 catgaaactgctgagttaaa-gtaggtacatttttcaggctttaaataaatcagttaaattgtcctccagaaaggctgtaccaattt-ctttcctcctaggagtgtttgagaacgcccgtttgcccagcaccc--------------------agtacggatcagtac----a------------------------gacat----------------------------------acaataagcaatttctcactgtatt-aatggac-------ctgtttttgt-tagtgaaatcacacgttctttttcactgggg-gggggggcggtggcgggaggagaggacatttgtatttcttcttttgtgaatta----------------cctg---ttgccct-----------------------------------------------------ttatcca--------------------------------------------tttttccactggtgtgtttgcc-----tttttttttttttcttactctg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7361079 338 - 7796314 cacgaaactgctgagttaaaggtatgtacagtcttcaggctttaaataaatcagttaaattgtcctccagaaaggctgtaccaattt-ctttcctcctaggagtgtttgagaatgcccgtttgcccagcaccc--------------------agtacagatcagtac----a------------------------gacat----------------------------------acaataagcagtttctcactgtatt-aatggac-------ctgtttttgt-tagtgaagtcacacgttctttttcact-----gggggggcggtggcgggaagagaggacatttgtatttcttcttttgtgaatta----------------gctg---ttgccct-----------------------------------------------------ttatcca--------------------------------------------tttttctactggtgtgttcgcc----ttttttttttttttcttgctctg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73834561 329 + 74750902 aatgaaactgctgaattaaaggtatgtacatttttcaggctttaaatgaatgagttaaattgtcctccagaaaggctgcaccaattt-cattcccactaggagtgtctgag-atgccccttcgcccagcaccc--------------------agcatagatcggtac---ga------------------------gacgc----------------------------------acggtaagcactatctcactgtatt-aattgac-------ctgtttctgc----tgaagtcaaaccttctttctcac------ggtggggtggtggcgggaggagaggacgcttgtgtttcttcttttgtgaactg----------------cctg---ctgcaat-----------------------------------------------------ttattca--------------------------------------------tttttctgctggtgtgtctgcc---------ttttttccctgctctcta i calJac3.chr17 C 0 I 38 s saiBol1.JH378146 17281061 328 - 17725628 aatgaaacttcggaattaaaggtatgtatatttgtcgggctttaaataaatcagttaaattgtcctccagaaaggctgcaccaattt-ccttcctactaggcatgtttgag-atgccccttcgcccagcaccc--------------------agc-tggatcggcac---ga------------------------gacac----------------------------------acagtaagcactgtctcactgtatt-ccctgac-------ctgtttctgc----tgaagtcaaacgttctttctcat------ggtggggtggtggcaggaggagaggatgcttgtatttcttcttttgtgaattg----------------cctg---ctgctgt-----------------------------------------------------ttatcca--------------------------------------------tttttctgctggtgtgtctgcc---------ttttcttcccttgctctg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6370761 325 + 6778120 aatgagactgctgaattaaaggtatgtacatttttcaggctttaaataagtcagttaaattgtcctccagaaaggctgcaccaattt-cattcctactaggagtgtttgag-atgcccctttgcccagcaccc--------------------agc-tggatcagtac---ga------------------------gacgc----------------------------------acagtaagcactctctcactgcatt-aattgac-------ctgtttctgc----tgaagtcaaacattcttcctcat------ggtgg---ggtggcgggaggagaggacgcttgtattttttcttttgtgaatcg----------------cctg---ctgctat-----------------------------------------------------ttatcca--------------------------------------------tttttctgctggtgtgtctgcc---------ttttctttccttgctctg i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 205351 351 + 608964 aacaaaattgctggcttagagataggcacatttttaaggctttagagacat-agtcaaattgtcctccagtaagactatatcaattt-cattcacactaggagtatttaagaatgccctttcccccagcaccc--------------------catacagatcagtac----a------------------------gacattataatttttataaatctttacctattgacacacacaataagtattatcttgctatattgggttatc-------ttttttttgc-tagtgaagttaagctttctttttcatt--------------gtgacgg---gggaggacaattttctgtttccttttgtgaattg----------------ctta---ttgcctt-----------------------------------------------------ctgtcca--------------------------------------------tttctctgctggtgtgtttgtc--------tttttattgcctag----- i otoGar3.GL873829 I 276 C 0 s canFam3.chr33 2318856 432 - 31377067 aatgaaattgctcagttaaagggatgcacatttttaagtctttagat-----agtcaaatggtcctcccgaaaggctgtgccgattt-cattcacaccaacagtgtttaagactatcctttccctccacaccctcatcatggaaattataatttttataagtccttacctatt------------------------ggcac----------------------------------atagttag-aatacctcactgtatc-aatttac-------tttttttttcctactgg--------tttctttttca-------tg-------------------gaaaacatttatattcctgcttttgtgttttgttttgttttgttttgttttt---ttgccttgcacatcttttatttctcAAATCTGTGGTGTGGGGTTCATCTGAACACAGCTCTTACCCAAAAAGGAAGAtatattcctgcttttggaaaacatttatagtcctactttcctctggcatatttccc--------tttttattgctttg----- i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 2697971 340 - 6579706 ---aggactacttggttaaaagaatgctcacttgtaaggttttagat--atcaa--aaattgtcttccagaaaggtggtaccaatttacattcacactagcagtgtttaagggtgccc-ttctcccaacaccctcatc---------------agtacagaatgttat----aattttaaaaaatctttagctatctgacat----------------------------------gaaataagtgatatctcactttatt-aacttacattttttttgtttttgc-tgatgaaagcaaactatcttttt---------tcatgggcgg-------------gggaatttgtattcctacttttgtgaattg----------------cctgtccttgctat-----------------------------------------------------ttgttaa--------------------------------------------tttttctgctggtgtatttgtc------------tattgccttg----- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14791139 1083 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88384353 450 + 114275543 I a score=968275.000000 s hg38.chr3_KI270934v1_alt 58533 86 + 163458 taagagttctctatatattaagggcatcctgttgttgctat-atgcggtgtaaataagttctttcaACTTA-TTATTGCTGTACGTGT s panTro5.chr3 2530721 86 - 202621043 taagagttctctatatattaagggcatcctgttgttgctat-atgcagtgtaaataagttctttcaACTTA-TTATTGCTGTAAGTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120867 86 - 190779 taagagttctctatatattaagggcatcctgttgttgctat-atgcagtgtaaataagttctttcaACTTA-TTATTGCTGTACGTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 71808 86 - 106623 taagagttctctatgtattaagggcatcctgttgttgctat-atgcggtgtaaataagttctttcaACTTA-TTATTGCTGTACGTGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2847501 86 - 123690457 taagagttctctgtatattaagggcatcctgttgtcgctat-gtgcggtgtaaataagttctttcaACTTA-TTATTGCTGTACATGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2344158 85 - 204787373 taagagttctctatat-ttaagtgcatcctgttgttgctat-atgcggtataaataagttctttcaattta-tTATTTCTGTACATGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192409323 85 - 192460366 taagagttctctatat-ttaagtgcatcctgttgttgctat-atgcggtataaataagttctttcaattta-tTATTTCTGTACATGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19148595 85 - 19675229 taagagttctctatat-ttaagtgcatcctgttgttgctat-atgcggtataaataagttctttcaattta-tTATTTCTGTACATGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16385527 85 - 16847902 taagagttctctatat-ttaagtgcatcccgttgttgctat-atgcggtataaataagttctttcaattta-tTATTTCTGTACATGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91355562 85 + 91754291 taagagttctctatat-ttaagTGCATCCCGTTGTTGCTAT-ATGCGGTATAAATAAGTTCTTTCAATTTA-TTATTTCTGTACATGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1421833 85 + 1977891 taagagttctctatat-ttaagtgcatcccgttgttgctat-atgcggtataaataagttctttcaattta-tTATTTCTGTACATGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7361417 85 - 7796314 taagagttctctatat-ttaagtgcatcctgttgttgctat-atgcggtataaataagctctttcaattta-tTATTTCTGTACATGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73834928 81 + 74750902 TAAGAGTTCTCTGTATATTAAAGGCATCCTGTTGTTGCTCT-GTGAGGTGTAAGTCA---CTTTCAGTTTG-TTATTTCTG--CACGT i calJac3.chr17 I 38 C 0 s saiBol1.JH378146 17281389 84 - 17725628 taagagttctctatatattaaagGCAACCTGTTGCTGCTATAATGCGGTGTAAGTAA---CTTTCAGTTTG-TCATTTCTGTACATGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6371086 83 + 6778120 taagagttctctgtatattgaaggcatcctgttgttgctat-atgcggtgtaagtaa---cttTCAATTTG-TTATTTCTGTACATGT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88384803 86 + 114275543 taagagttctctatatgttaagggcattctgtttttgatat-atgtagtgtacataagttctttcggtttg-tTATTTCTGTAGATGT i micMur3.chr1 I 450 I 13 s otoGar3.GL873829 205702 86 + 608964 taagagttctctgtgtgttaagggcattctgtttttgctgt-atgtagtgtaaataagctctttcagtttg-tTATTTCTGTAGACGT i otoGar3.GL873829 C 0 I 13 s canFam3.chr33 2319288 87 - 31377067 taagaactctttgtatattaaggagattctggttttgccat-atatggtgtaaataagttcttttggtttgttttttTCTGTATATGT i canFam3.chr33 C 0 I 13 s dasNov3.JH569502 2698311 84 - 6579706 -taaaactctctgtgtattaaggacttacggtt-ttgtcag-atgtggtgtgaatacgttctttcaGGTTG-CTGTTTCTGCACACCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14791139 1083 - 22200726 I e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I a score=147222.000000 s hg38.chr3_KI270934v1_alt 58619 12 + 163458 CTAACTTC-------AATC s panTro5.chr3 2530807 12 - 202621043 CTAACTTC-------AATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120953 12 - 190779 CTAACTTC-------AATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 71894 12 - 106623 CTAACTTC-------AATC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2847587 12 - 123690457 CTAACTTC-------AATC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2344243 12 - 204787373 CTAACTTC-------GATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192409408 12 - 192460366 CTAACTTC-------GATC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19148680 12 - 19675229 CTAACTTC-------GATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16385612 12 - 16847902 CTAACTTC-------AATC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91355647 12 + 91754291 CTAACTTC-------AATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1421918 12 + 1977891 CTAACTTC-------AATC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7361502 12 - 7796314 CTAACTTC-------AATC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73835009 12 + 74750902 CTAACTTT-------AATC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17281473 12 - 17725628 CTAACTCT-------AATC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6371169 17 + 6778120 CTAACTTTCTGTA--CATC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88384902 12 + 114275543 GTAACTTT-------AATC i micMur3.chr1 I 13 C 0 s proCoq1.NW_012133858v1 14792222 12 - 22200726 ctaacttt-------aatc i proCoq1.NW_012133858v1 I 1083 C 0 s otoGar3.GL873829 205801 12 + 608964 CTAACTCT-------AATC i otoGar3.GL873829 I 13 C 0 s canFam3.chr33 2319388 12 - 31377067 CTAAGTTT-------AGCC i canFam3.chr33 I 13 C 0 s dasNov3.JH569502 2698395 19 - 6579706 CCAACCCCCCCTACTAATC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32782662 927 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I a score=3332004.000000 s hg38.chr3_KI270934v1_alt 58631 280 + 163458 --CCTG-GGAGAAGAGA-----CAGATTTGA------AT---CCTCCACGGCACATAGCTCAGTCTCTCTTCTGCGGCAGCTGCCCAACATATATGCC----AAG-------------------------------------------------------------------------------------ATGAG----CGAATTATTTTTGTCCAAGCTACTTTATGAAACTCATT-CTGCTCCACTCCAGAAATGGAAGGGA-TCCATCAAACGTTCAGA----------CTCCCCTTGCTCACAGCAGC-ATCAACACAGTCTCCTTGTTTCCttcattcatctaaca------------------------------------------------aatgttt--------------------------actgagcc---cctggtatgtgccaggtac------tgttcttggcactaggga s panTro5.chr3 2530819 280 - 202621043 --CCTG-GGAGAAGAGA-----CAGATTTGA------AT---CCTCCATGGCACATAGCTCAGTCTCTCTTCTGCAGCAGCTGCCCAACATATATGCC----AAG-------------------------------------------------------------------------------------ATGAG----CGAATTATTTTTGTCCAAGCTACTTTATGAAACTCATT-CTGCCCCACTCCAGAAATGGAAGGGA-TCTGTCAAACGTTCAGA----------CTCCCCTTGCTCACAGCAGC-ATCAACATTGTCTCCTTGTTTCCttcattcatctaaca------------------------------------------------aatattt--------------------------actgagcc---cctggtatgtgccaggtac------tgttcttggcactaggga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120965 280 - 190779 --CCTG-GGAGAAGAGA-----CAGATTTGA------AT---CCTCCACGGCACATAGCTCAGTCTCTCTTCTGCGGCAGCTGCCCAACATATATGCC----AAG-------------------------------------------------------------------------------------ATGAG----CGAATTATTTTTGTCCAAGCTACTTTATGAAACTCATT-CTGCCCCACTCCAGAAATGGAAGGGA-TCCGTCAAACGTTCAGA----------CTCCCCTTGCTCACAGCAGC-ATCAACATTGTCTCCTTGTTTCCttcattcatctaaca------------------------------------------------aatattt--------------------------actgagcc---cctggtatgtgccaggtac------tgttcttggcactaggga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 71906 279 - 106623 --CCTG-GGAGAAGAGA-----CAGATTTGA------AT---CCTCCACGGCACATAGCTCAGTCTCTCTTCTGCGGCAGCTGCCCAATATATATGCC----AAG-------------------------------------------------------------------------------------ATGAG----CGAATTATTTTTGTCCAAGCTACTTTTTGAAACTCATT-CTGCCCCACTCCAGAAATGGAAGGGA-TCCATCAAACGTTCAGA----------CT-CCCTTGCTCACAGCAGC-ATCAACATTGTCTCCTTGTTTCCttcattcatctaaca------------------------------------------------aatgttt--------------------------actgagcc---cctggtatgtgccaggtac------tgttcttggcactaggga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2847599 280 - 123690457 --CCTG-GGAGAAGAGA-----CAGATTTGA------AT---CCTCCACGGCACATAGCTCAGTCTCTCTTCTGTGGCAGGTGCTCAACATATATGCC----AAG-------------------------------------------------------------------------------------ATGGG----CGAATTATTTTTGTCCAAGCTACTTTATGAAACTCATT-CTGCCCCACTCCAGAAATGGAAGGGA-TCCGTCAAACGTTCAGA----------CTCCCCTTGCTCACAGCAAT-ATCAACACTGTCTCCTTGTTTCCttcactcatctaaca------------------------------------------------aatgttt--------------------------actgagcc---cctggtatgtgccaggtac------tgttcttggcactaggaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2344255 280 - 204787373 --CCTG-GGAGAAGAGA-----CAGGTTTGA------AT---CCTCCACGGCACGTAGCTCAGTCTATCTTCTGAGGCAGGTGCTCAACATATTTGCC----AAG-------------------------------------------------------------------------------------ATGAG----CGAATTATTTTTGTCCAAGCTACTTTATGAAACTCATT-CTGCCCCACTCCAGAAATGGAAGGGA-TCCGTCAAACGCTCACA----------CTCCCCTTGCTCACAGCAAT-GTCAACGTTGTCTCCTTGTTTCCttcattcatctaacg------------------------------------------------aatgttt--------------------------tctgagcc---cctggcatgtgccaggtac------tgttcttggcactaggga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192409420 280 - 192460366 --CCTG-GGAGAAGAGA-----CAGGTTTGA------AT---CCTCCACGGCACGTAGCTCAGTCTATCTTCTGAGGCAGGTGCTCAACATATTTGCC----AAG-------------------------------------------------------------------------------------ATGAG----CGAATTATTTTTGTCCAAGCTACTTTATGAAACTCATT-CTGCCCCACTCCAGAAATGGAAGGGA-TCCGTCAAACGCTCACA----------CTCCCCTTGCTCACAGCAAT-GTCAACGTTGTCTCCTTGTTTCCttcattcatctaacg------------------------------------------------aatgttt--------------------------actgagcc---cccggcatgtgccaggtac------tgttcttggcactaggga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19148692 280 - 19675229 --CCTG-GGAGAAGAGA-----CAGGTTTGA------AT---CCTCCACGGCACGTAGCTCAGTCTATCTTCTGAGGCAGGTGCTCAACATATTTGCC----AAG-------------------------------------------------------------------------------------ATGAG----CGAATTATTTTTGTCCAAGCTACTTTATGAAACTCATT-CTGCCCCACTCCAGAAATGGAAGGGA-TCCGTCAAACGCTCACA----------TTCCCCTTGCTCACAGCAAT-GTCAACGTTGTCTCCTTGTTTCCttcattcatctaacg------------------------------------------------aatgttt--------------------------actgagcc---cccggcatgtgccaggtac------tgttcttggcactaggga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16385624 280 - 16847902 --CCTG-GGAGAAGAGA-----CAGGTTTGA------AT---CCTTCACGGCACGTAGCTCAGTCTATCTTCTGAGGCAGGTGCTCAACATATTTGCC----AAG-------------------------------------------------------------------------------------ATGAG----CGAATTATTTTTGTCCAAGCTACCTTATGAAACTCATT-CTGCCCCACTCCAGAAATGGAAGGGA-TCCGTCAAACGCTCACA----------CTCCCCTTGCTCACAGCAAT-GTCAACGTTGTCTCCTTGTTTCCttcattcatctaacg------------------------------------------------aatgttt--------------------------actgagcc---cccggcatgtgccaggtac------tgttcttggcactaggga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91355659 280 + 91754291 --CCTG-GGAGAAGAGA-----CAGGTTTGA------AT---CCTCCACGGTACGTAGCTCCGTCTATCTTCTGAGGCAGGTGCTCAACATATTTGCC----AAG-------------------------------------------------------------------------------------ATGAG----CGAATTATTTTTGTCCAAGCTACCTTATGAAACTCATT-CTGCCCCACTCCAGAAATGGAAGGGA-TCCGTCAAACGCTCACA----------CTCCCCTTGCTCACAGCAAT-GTCAACGTTGTCTCCTTGTTTCCttcattcatctaacg------------------------------------------------aatgttt--------------------------actgagcc---cccggcatgtgccaggtac------tgttcttggcactaggga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1421930 280 + 1977891 --CCTG-GGAGAAGAGA-----CAGGTTTGA------CT---CCTTCACGGCACGTAGCTCAGTCTATCTTCTGAGGCAGGTGCTCAACATATTTGCC----AAG-------------------------------------------------------------------------------------ATGAG----AGAATTATTTTTGTCCAAGCTACCTTATGAAACTCATT-CTGCCCCACTCCAGAAATGGAAGGGA-TCCGTCAAACACTCACA----------CTCCCCTTGCTCACAGCAAT-GTCAACGTTGTCTCCTTGTTTCCttcattcatctaacg------------------------------------------------aatgttt--------------------------actgagcc---cccggcatgtgccaggtac------tgttcttggcactaggga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7361514 280 - 7796314 --CCTG-GGAGAAGAGA-----CAGGTTTGA------AT---CCTCCACGGCACGTAGCTCAGTCTATCTTCTGAGGCAGGTGCTCAACATATTTGCC----AAG-------------------------------------------------------------------------------------ATGAG----TGAATTATTTTTGTCTGAGCTACTTTATGAAACTCATT-CTGCCCCACTCCAGAAATGGAAGGGA-TCCGTCAAACGCTCACA----------CTCCCCGTGCTCACAGCAAT-GTCAGCGTTGTCTCCTCGTTTCCttcattcatctaacg------------------------------------------------aatgttt--------------------------actgagcc---cccggtatgtgccaggtac------tgttcttggcactaggga i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73835021 278 + 74750902 --CCTG-GGAGAAGAAA-----CAGATTTGA------AT---CCTCCATGGCACACAGCTCAGTCTCTCTTCTGCGGCAGGTACTCAACAGATGTGCC----AAG-------------------------------------------------------------------------------------ATGAG----TGGGTTATTTTTGTCCAAGCTACTTTATGAAACCCATT-CTGCCCTACTCCAGAAAT-GAAGGGA-CCAGTCGAACATTCACA----------CTCCCCTTGCTCACAGCAAT-GTCAATGTTGTCTCCTTG-TTCTttcattcatccaaca------------------------------------------------aatgttt--------------------------cctgagcc---cctgatatgtgccaggtgc------cattctgggcacgagggt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17281485 261 - 17725628 --CCTG-GCAGAAGAAA-----CAGATTTGA------AT---CCTCCGAGGCACACAGCTCAGTCTCTCTTCTGCGGCAGGCACTCAACAGACGTGCC----AAG-------------------------------------------------------------------------------------ATGAG----TGGATTATTTCTGTCCAAGCTACTTTATGAAACCCCTT-CTGCCCTACTCCA--------------------GAACATTCACA----------CCCCCTGTGCTCACAGCAAT-GTCAATGTTGTCTCATTGTTTCTttcatccatccaacg------------------------------------------------aatgttt--------------------------actgagcc---cctgatatgtgccaggtgc------cattctgggcactagggt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6371186 277 + 6778120 --CCTG-GCAGAAGAAA-----CAGATTTGA------AT---CCT-CATGACACGTAGCTCAGTCTCTCTTCTGCGGCAGGTACTCAACAGATGTCCC----AAG-------------------------------------------------------------------------------------ATGAG----TGGATTATTTTTATCCAAGCTACTTTATGAAACCCATT-CTGCCCGACTCCAGAAAC-GAAGGGA-TCAGTTGAACGTCCACA----------CCCCCCTTGCTCCCAGCAAT-GTCAAT-TTGTCTCCTTCTTTCTttcattcatccaacg------------------------------------------------aatgttt--------------------------actgatcc---cctgatatgtgccaggtac------cattctgggcactagggt i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88384914 285 + 114275543 --CCGG-TGGGAAGAGA-----CATCTTTGA------AC---CCTCCATGGCAGATAGCATAGTCTGTCTTCTGTGGTAGGAGCTCAGCAAATATGCC----AGG-------------------------------------------------------------------------------------ATGAATGTTTGACTTATTTTTATCCAACCTACTTTATGAAACTCATT-CTGCCCCACTCTGGAAATAGAAGGGAGTCAGTTGAATATTCACA----------CTCCCCTTATTCAGAGTAAT-ATCAACGTAGTTTTATTGTTTCCttcattcatttaaca------------------------------------------------aatagtc--------------------------actgagca---ccttgtatgtgccaggcac------tgttctcagtcctaggga i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14792234 285 - 22200726 --ccag-tgggaagaga-----catctttga------ac---cctccacggcacatagcgtagtctctcttctgtggcaggagctcagcaaatatGCC----AGG-------------------------------------------------------------------------------------ATGGATGTTTGAATTATTTTTATCCAACCTACTTTATGAAACTCATT-CTGCCCTACTCTGGAAATAGAAGGAAGTCAGTCGAATATTCACA----------CTCCCCTTATTCAGAGCACG-ATCAGCATCGTTCCATTGTTTCCttcattcatttaaca------------------------------------------------aatagtc--------------------------actgagca---ccttttatgtgccaggcac------tgttctcagccctaggga i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 205813 287 + 608964 --TTA--CAGGAAGAGA-----CATCTTGGAGTTCCCAC---CCCACACGGCACAGGGCACAGCCTCTC-TCTGGGGTGGGTGCCCAGCGAGTATGTC----AGG-------------------------------------------------------------------------------------AGGAATGTTTGAGTTATTTTTATCCAACCTACTTTATAAAACTCATT-CTTCCCCTCTCTGGAAATAGAAGGGAAACAGTTGAATATTCTTA----------CCCGCCTTATTCAGAGAAAT-ATCAACATTGTTTCATTATTTTCttcattcattta--a------------------------------------------------aatattc--------------------------accgagta---ccctttatatgccagacac------tattctcagcactggaga i otoGar3.GL873829 C 0 I 18 s mm10.chr16 32783589 458 + 98207768 --ccca-ggacctgAGA-----CATCTTTGA------AT---GTTCTTCAGCATACAGCATGGTCTCTCTTCTGTTTAAGGCACTCACCAACCACACC----AAacacacacaccaaacacacacaccaaataccacaccaaacacacacaccaaacacacacacCAAATACCACACCAAACACACCATCATAAGAGTTTGAATCATTTGC-----AACCACTCTATGAAGCTCATTCCTGCCCCACACCGAGAACACAAGGACGTCAGCTGAGAGCACACACAAACACCCCCCCCCCTTATTCAGAGCAAC-CACAGAGCCATCT-GTTGTTTTTATTAACTACTTAACATACTCATGGAGCAGCTTGGTCAttatttcaatgccgggaattaaaaccagtgttttgttcctgctgagaaattgctccaagactgagctacaaccacaacACACAAAGTACTGACTATGTGCAAGGAGCTAGGGA i mm10.chr16 I 927 C 0 s canFam3.chr33 2319400 284 - 31377067 --CCTGTGGGGAAGAGA-----CATCAGCGA------ATAACCCCCCATGGCACACACCAT-GCCTCTCTTCTGTTGCAGG-GCCTGGCAAAAATGCTGGGAAGG-------------------------------------------------------------------------------------ATGAT----TGAATTATTTTTGTCCAACCTACTTTATAAACCTCACC-CTGCCTCATCATGCAAGGGGGAGGGGATCAGCTGAATACACGTA----------CTGCCCTTATGCACAGCAATAGTCGAAGTTGTCT---GGTTTCCtccactcatttaact------------------------------------------------aatattt--------------------------accgagca---cctttcatgcggcaggcac------tgtgcgggacgctaggg- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2698414 275 - 6579706 CCTCTA-GGGAAAGCTGTGTCTCAGTCCTGA------AT---CCCCCAC-GCACATA-CATAGTCCCTCTCACACCACAAGTGGTCAGCAAACGTGCC----GTG-------------------------------------------------------------------------------------AAGAACGTGTGGATGATTTCTGTCCAGCCGCCTTTGTCAAAGTCATT-CTGCCCCACTCTGTGAGAGGAAGGGGGTCAGGCGAATATTCAGA-------------------------GCCAA-GCCCAAGTTGTTTTGTAGCTTTCtccagtcatatgaca------------------------------------------------aacattt--------------------------attgagca---ccttttgggtgccaggcac------tgttctagggactaggga i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 9541 2356 + 69927 I a score=640259.000000 s hg38.chr3_KI270934v1_alt 58911 53 + 163458 aaccataatgggcaaaatctttca-ttctagttggaggactcagataataaaga s panTro5.chr3 2531099 53 - 202621043 aaccataatgggcaaaatctttca-ttctagttggaggactcagataataaaga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121245 53 - 190779 aaccataatgggcaaaatctttca-ttctagttggaggactcagataataaaga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 72185 53 - 106623 aaccataatgggcaaaatctttca-ttctagttggaggactcagataataaaga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2847879 53 - 123690457 aaccataatgggcaaaatctttca-ttctagttgggggacacagataataatga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2344535 53 - 204787373 aaccgtaaagggcaaaacctttca-ttctagttgggggacacagataataaaga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192409700 53 - 192460366 aaccgtaaagggcaaaacctttca-ttctagttgggggacacagataataaaga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19148972 53 - 19675229 aaccgtaaagggcaaaacctttca-ttctagttgggggacacagataataaaga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16385904 53 - 16847902 aaccgtaaagggcaaaacctttca-ttctagttgggggacacagataataaaga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91355939 53 + 91754291 aactgtaaagggcaaaatctttca-ttctagttgggggacacagataataaaga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1422210 53 + 1977891 aaccgtaaagggcaaaacctttca-ttctagttgggggacacagatactaaaga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7361794 53 - 7796314 aaccgtaaagggcaaaatctttca-ttctagttgggggacacagataataaaga i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73835299 48 + 74750902 taccataatgggcaaaatctttca-ttgtagttgagggactcagataat----- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17281746 53 - 17725628 taccataatgggcaaaatctttca-ttctggttgggggactcagataataaaga i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6371463 53 + 6778120 taccataatgggcaaaatctgtca-ttctaattgggggactcagataataaaga i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88385199 54 + 114275543 tacggtaaaaggcaaaattttccatttctagttgggggacacagataataaaca i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14792519 53 - 22200726 tgtggtaaagggcaaaatctttca-ttctagttggggggcacagataataaaca i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 32784047 53 + 98207768 CATCACAATAGGCAAAGGATATGA-TTATAGTTGAAGGACTCTGGTGATAAAGA i mm10.chr16 C 0 I 96 s canFam3.chr33 2319684 53 - 31377067 agccggagtgagcgaacgctcaca-ttccagttgagggagacggataataagac i canFam3.chr33 C 0 I 4 s dasNov3.JH569502 2698689 52 - 6579706 tacaacaacaggcaaag-cttcca-tgccagttgagggagacaggtcaacacga i dasNov3.JH569502 C 0 I 5 e aotNan1.NW_018503669v1 9541 2356 + 69927 I e otoGar3.GL873829 206100 18 + 608964 I a score=82216.000000 s hg38.chr3_KI270934v1_alt 58964 7 + 163458 aaacaaa s panTro5.chr3 2531152 7 - 202621043 aaacaaa i panTro5.chr3 C 0 I 4 s panPan2.chrUn_NW_014024201v1 121298 7 - 190779 aaacaaa i panPan2.chrUn_NW_014024201v1 C 0 I 4 s gorGor5.CYUI01000576v1 72238 7 - 106623 aaacaaa i gorGor5.CYUI01000576v1 C 0 I 4 s nomLeu3.chr11 2847932 7 - 123690457 aaatgaa i nomLeu3.chr11 C 0 I 4 s rheMac8.chr2 2344588 7 - 204787373 aaacaaa i rheMac8.chr2 C 0 I 4 s macFas5.chr2 192409753 7 - 192460366 aaacaaa i macFas5.chr2 C 0 I 4 s macNem1.NW_012014355v1 19149025 7 - 19675229 aaacaaa i macNem1.NW_012014355v1 C 0 I 4 s cerAty1.NW_012004056v1 16385957 7 - 16847902 aaacaaa i cerAty1.NW_012004056v1 C 0 I 4 s chlSab2.chr15 91355992 7 + 91754291 aaacaaa i chlSab2.chr15 C 0 I 4 s manLeu1.NW_012102020v1 1422263 7 + 1977891 aaacaaa i manLeu1.NW_012102020v1 C 0 I 4 s colAng1.NW_012118932v1 7361847 7 - 7796314 aaataaa i colAng1.NW_012118932v1 C 0 I 4 s saiBol1.JH378146 17281799 7 - 17725628 aaacaaa i saiBol1.JH378146 C 0 I 4 s cebCap1.NW_016107444v1 6371516 7 + 6778120 aaacaaa i cebCap1.NW_016107444v1 C 0 I 4 s micMur3.chr1 88385253 7 + 114275543 agacaaa i micMur3.chr1 C 0 I 2729 s proCoq1.NW_012133858v1 14792572 7 - 22200726 agacaaa i proCoq1.NW_012133858v1 C 0 I 4 s canFam3.chr33 2319741 7 - 31377067 acataaa i canFam3.chr33 I 4 C 0 s dasNov3.JH569502 2698746 7 - 6579706 aaataaa i dasNov3.JH569502 I 5 C 0 e mm10.chr16 32784100 96 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e calJac3.chr17 73835347 0 + 74750902 C e otoGar3.GL873829 206100 18 + 608964 I a score=327389.000000 s hg38.chr3_KI270934v1_alt 58971 29 + 163458 atatgtatgacgttcaattgtgatcagca s panTro5.chr3 2531163 29 - 202621043 atatgtatgatgttcaattgtgatcagca i panTro5.chr3 I 4 C 0 s panPan2.chrUn_NW_014024201v1 121309 29 - 190779 atatgtatgatgttcaattgtgatcagca i panPan2.chrUn_NW_014024201v1 I 4 C 0 s gorGor5.CYUI01000576v1 72249 29 - 106623 acatgtatgatgttcaattgtgatcagca i gorGor5.CYUI01000576v1 I 4 C 0 s nomLeu3.chr11 2847943 29 - 123690457 atacgtatgatgttcaattgtgatcagcg i nomLeu3.chr11 I 4 C 0 s rheMac8.chr2 2344599 29 - 204787373 atacatatgatgttcaactgtgatcagca i rheMac8.chr2 I 4 C 0 s macFas5.chr2 192409764 29 - 192460366 atacgtatgatgttcaactgtgatcagca i macFas5.chr2 I 4 C 0 s macNem1.NW_012014355v1 19149036 29 - 19675229 atacgtatgatgttcaacagtgatcagca i macNem1.NW_012014355v1 I 4 C 0 s cerAty1.NW_012004056v1 16385968 29 - 16847902 atatgtatgatgttcaattgtgatcagca i cerAty1.NW_012004056v1 I 4 C 0 s chlSab2.chr15 91356003 29 + 91754291 atatgtatgatgttcaattgtgatcagca i chlSab2.chr15 I 4 C 0 s manLeu1.NW_012102020v1 1422274 29 + 1977891 atatgtatgatgttcaattgtgatcagca i manLeu1.NW_012102020v1 I 4 C 0 s colAng1.NW_012118932v1 7361858 29 - 7796314 atatgtatgatgttcaattgtgatcagca i colAng1.NW_012118932v1 I 4 C 0 s calJac3.chr17 73835347 27 + 74750902 --atgtatgatgttccatcgtgatcagcg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17281810 29 - 17725628 acatgtatgatgttcaattgtgatcagca i saiBol1.JH378146 I 4 C 0 s cebCap1.NW_016107444v1 6371527 29 + 6778120 atatgtatgatgttcaattgtgatcagca i cebCap1.NW_016107444v1 I 4 C 0 s proCoq1.NW_012133858v1 14792583 29 - 22200726 gtatgtatgatgttaagttgttatcagcg i proCoq1.NW_012133858v1 I 4 C 0 s canFam3.chr33 2319748 29 - 31377067 atatgtattatgttaggttggaatcagca i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2698753 29 - 6579706 atatgtattatgtgaggttgtggccagtt i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32784100 96 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I e otoGar3.GL873829 206100 18 + 608964 I a score=279069.000000 s hg38.chr3_KI270934v1_alt 59000 31 + 163458 ctataaagtacgtcaaagtaca--gaagggg------------------------------------------------------ag s panTro5.chr3 2531192 31 - 202621043 ctataaagtacgtcaaagtaca--gaagggg------------------------------------------------------ag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121338 31 - 190779 ctataaagtacgtcaaagtaca--gaagggg------------------------------------------------------ag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 72278 31 - 106623 ctataaagtacatcaaagtaca--gaagggg------------------------------------------------------ag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2847972 31 - 123690457 ctataaagtacatcaaagtaca--gatgggg------------------------------------------------------ag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2344628 31 - 204787373 ctgtaaagtacatcaaagtaca--gaagggg------------------------------------------------------ag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192409793 31 - 192460366 ctgtaaagtacatcaaagtaca--gaagggg------------------------------------------------------ag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19149065 31 - 19675229 ctgtaaagtacatcaaagtaca--gaagggg------------------------------------------------------ag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16385997 31 - 16847902 ctgtaaagtacatcaaagtaca--gaagggg------------------------------------------------------ag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91356032 31 + 91754291 ctgtaaagtacatcaaagtaca--gaagggg------------------------------------------------------ag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1422303 31 + 1977891 ctgtaaagtacatcaaagtaca--gaagggg------------------------------------------------------ag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7361887 31 - 7796314 tcgtaaagtacatcaaagtgca--gaagggg------------------------------------------------------ag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73835374 31 + 74750902 ctataatgtacatcaaaataca--gaagggg------------------------------------------------------ag i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17281839 31 - 17725628 ctataatgtacatcaaaataca--gaagggg------------------------------------------------------ag i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6371556 31 + 6778120 ctgtaatgtacatcaaaataca--gaagggg------------------------------------------------------ag i cebCap1.NW_016107444v1 C 0 I 1961 s proCoq1.NW_012133858v1 14792612 31 - 22200726 ctatgaatgaaatcatagcaga--ggagggg------------------------------------------------------ag i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 32784196 85 + 98207768 ctacagagtgagttctaggaca--gccagggctacacagagaaaccctgtctcggaaaaaaaaaaTGTATCAGGTATATCAAAGAAG i mm10.chr16 I 96 I 1 s canFam3.chr33 2319777 27 - 31377067 ttaagaagaaaatcaaagcaga--ggagg---------------------------------------------------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2698782 33 - 6579706 ctataaacgaaaacaaaatgggatgtgggga------------------------------------------------------ag i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I e otoGar3.GL873829 206100 18 + 608964 I a score=9241.000000 s hg38.chr3_KI270934v1_alt 59031 2 + 163458 ac s panTro5.chr3 2531223 2 - 202621043 ac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121369 2 - 190779 ac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 72309 2 - 106623 ac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2848003 2 - 123690457 ac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2344659 2 - 204787373 ac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192409824 2 - 192460366 ac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19149096 2 - 19675229 ac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16386028 2 - 16847902 ac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91356063 2 + 91754291 ac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1422334 2 + 1977891 ac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7361918 2 - 7796314 ac i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73835405 2 + 74750902 gc i calJac3.chr17 C 0 I 1651 s saiBol1.JH378146 17281870 2 - 17725628 gc i saiBol1.JH378146 C 0 I 1963 s proCoq1.NW_012133858v1 14792643 2 - 22200726 gt i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 32784282 1 + 98207768 A- i mm10.chr16 I 1 C 0 s dasNov3.JH569502 2698815 2 - 6579706 gc i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I e cebCap1.NW_016107444v1 6371587 1961 + 6778120 I e canFam3.chr33 2319804 0 - 31377067 C e otoGar3.GL873829 206100 18 + 608964 I a score=1461606.000000 s hg38.chr3_KI270934v1_alt 59033 223 + 163458 tg--aatttgtaggcagcat-----ggtcat----ggtagacctcgctgagaag-------------gggcat--gaa---ggtggaggtagaggg---tttagacaagtggatatgtagaggagaaggcttctgagcagactaagcaa--tgcacagaaaggtcccaaggcaa-------gagcaggcccagcgcattaaagggacaagaaagacgtcca---tgtggctgcggtgcagtcagcaaattaaggaggcag-g-ggaggg s panTro5.chr3 2531225 223 - 202621043 tg--aatttgtaggcagcat-----ggtcat----ggtagacctcactgagaag-------------gggcat--gaa---ggtggaggtagaggg---tttagacaagtggatatgtagaggagaaggcttctgagcagactaagcca--tgcacagaaaggtcccaaggcaa-------gagcaggcccagcgcattcaagagacaagaaagacatccg---tgtggctgcggttcagtgagcaaattaaggaggcag-g-ggaggg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121371 223 - 190779 tg--aatttgtaggcagcat-----ggtcat----ggtagacctcactgagaag-------------gggcat--gaa---ggtggaggtagaggg---tttagacaagtggatatgtagaggagaaggcttctgagcagactaagcca--tgcacagaaaggtcccaaggcaa-------gagcaggcccagcgcattcaagagacaagaaagacgtccg---tgtggctgcggttcagtgagcaaattaaggaggcag-g-ggaggg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 72311 223 - 106623 tg--aatttgtaggcagcat-----ggtcac----ggtagacctcgctgagaag-------------gggcat--gaa---ggtggaggtagaggg---tttagacaagtggatatgtagaggagaaggcttctgagcagactaagcaa--tgcacagaaaggtcccaaggcaa-------gagcaggcccagcgcattcaagggacaagaaagacgtccg---tgtggctgcggttcagtgagcaaattaaggaggcag-g-ggaggg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2848005 223 - 123690457 tg--aatttgtaggcagcat-----ggtcat----ggtagaactcgctgagaag-------------gggcgt--gaa---ggtggaggtagaggg---tttagacaagtggataggtggaggagaaggcttctgagcagactaagcaa--cgcacagaaagggcccaaggcaa-------gagcaggcccactgcatttaagggacaagaaagacgtccg---tgtggctgcagtgcagtgagcaaattcaggaggcag-g-ggaggg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2344661 206 - 204787373 tg--aatttttaagcagcat-----ggtcat----ggcagaccttgctgagaag-------------ggacgt--gaa---ggtggaggtagaggg----ttagccaagtggatatgcagaggag---------gagcagactgagcaa--tgcacagaaaggtcccaaggcaa-------gagcaggcccagtgcattcaagggacaagaaagacgtcag---tgtggctgtggt-------gcaaattaaggaggcag-g-ggaggg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192409826 206 - 192460366 tg--aatttttaagcagcat-----ggtcat----ggcagaccttgctgagaag-------------ggacgt--gaa---ggtggaggtagaggg----ttagccaagtggatatgcagaggag---------gagcagactgagcaa--tgcacagaaaggtcccaaggcaa-------gagcaggcccagtgcattcaagggacaagaaagacgtcag---tgtggctgtggt-------gcaaattaaggaggcag-g-ggaggg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19149098 206 - 19675229 tg--aatttttaagcagcat-----ggtcat----ggcagaccttgctgagaag-------------ggacgt--gaa---ggtggaggtagaggg----ttagccaagtggatatgcagaggag---------gagcagactgagcaa--tgcacagaaaggtcccaaggcaa-------gagcaggcccagtgcattcaagggacaagaaagacgtcag---tgtggctgtggt-------gcaaattaaggaggcag-g-ggaggg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16386030 217 - 16847902 tg--aatttttaagcagcat-----ggtcat----ggcagacctcgctgagaag-------------ggacgt--gaa---ggtggaggtagaggg----ttagccaagtggatatgcagaggagaaggctcctgagcagactgagcaa--tgcacagaaaggtcccaaggcaa-------gagcaggcccagtgcattcaagggacaagaaaga----ag---tgtggctgtggtgcagtgagcaaattaaggaggca--g-ggaggg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91356065 214 + 91754291 tg--aatttttaagcagcat-----ggtcat----ggcagacctcgctgagaag-------------ggacgt--gaa---ggtggaggtagaggg----ttagccaagtggatatgcagaggagaaggctcctgagcagactgagcaa--cgcacagaaaggtcccaaggcaa-------gagcaggcccagtgcattcaagggacaagaaagatgtcag---tgtggctgtggt-------gcaaattaaggaggca--g-ggaggg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1422336 217 + 1977891 tg--aatttttaagcagcat-----ggtcat----ggcagacctcgctgagaag-------------ggacgt--gaa---ggtggaggtagaggg----ttagccaagtggacatgcagaggagaaggcttctgagcagactgagcaa--cgcacagaaaggtcccaaggcaa-------gagcaggcccagtgcattcaagggacaagacaga----ag---tgtggctgtggtgcagtgagcaaattaaggaggca--g-ggaggg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7361920 222 - 7796314 tg--aatttttaagcagcgt-----ggtcat----ggcagacctcgctgagaag-------------ggacgt--gaa---ggtggaggtagaggg----ttagccaagtggatatggagaggagaagacttctgagcagactgagcaa--tgcacagaaagatcccaaggcaa-------gagcaggcccagtgcattcaagggacaagaaagatgtcag---tgtggctgtggtgcagtgagcaaattaaggtggcag-g-ggaggg i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 14792645 227 - 22200726 tg--aatttttaaatagggt-----ggtcag----ggtaggcctcactgagaag-------------ggacat--gaagggggtggagatggagga---gttagctgagcaaatgtctagaggagaaaccttctaagcagaccgagcaa--tgcacacaaaggtcccaaggccc-------gagcaggcccgatgcattcaaggaacagcaaagaactcag---tgtggctgcagtgcagtgagcaagttaaagagatgg-gcagaggg i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 32784283 242 + 98207768 TGGCAGTCGGTATGTAGCGTGAAAAGGGCATTGTGGGTAGAGTATAttgaggag-------------gggcagaagga---ggtggagagggagga----ggcattgagcagatgtctggaggagaggccttctaagcagacagaacaa--tacacacaaaggccccaaggcccaagacctgagcagatctggcacatcccaggaacagccaagttccttgctttgcggct----tacaaagagcaggctagagaggcggct-acagca i mm10.chr16 C 0 C 0 s canFam3.chr33 2319804 176 - 31377067 -------------------t-----ggTC------GGGTGGCCCCACCGAGAGG-------------GGGAA---GGA---GGTGGAGCTG---------TTGGTCAGGTCGGTATCTGCAGGAGAAGGCCTCTGAGCAAACTGAGCAG--TGCATG---------CGAGGCCT-------GATGGGTTCCCGGGCGCC------------GAGAGGTCAG---CGTCCCTGCAGTGAAGTGAGCAAGTTCAGGGGGCGG-G-GGGGGG i canFam3.chr33 C 0 I 318 s dasNov3.JH569502 2698817 234 - 6579706 tg--catttgtaaatagggt-----ggtgg-----ggcagatctc-ttgagaagacggcaattcagcagatgt--gaa---g--gaaggtgggggggcagttagccaggtgggtatctggtggagaagcattccaagcaaactgagcaagctgcatg---aggtccctggacag-------cagcaggcccgatgctttccagaaacagccaggaagtcag---ggtggctagagggcagggagcaggtggtggctgctg-g-gggtag i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I e saiBol1.JH378146 17281872 1963 - 17725628 I e calJac3.chr17 73835407 1651 + 74750902 I e cebCap1.NW_016107444v1 6371587 1961 + 6778120 I e otoGar3.GL873829 206100 18 + 608964 I a score=10500.000000 s hg38.chr3_KI270934v1_alt 59256 1 + 163458 g s panTro5.chr3 2531448 1 - 202621043 g i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121594 1 - 190779 g i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 72534 1 - 106623 g i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2848228 1 - 123690457 g i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2344867 1 - 204787373 g i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192410032 1 - 192460366 g i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19149304 1 - 19675229 g i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16386247 1 - 16847902 g i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91356279 1 + 91754291 g i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1422553 1 + 1977891 g i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7362142 1 - 7796314 g i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 14792872 1 - 22200726 g i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 32784525 1 + 98207768 g i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2699051 1 - 6579706 g i dasNov3.JH569502 C 0 I 1448 e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I e saiBol1.JH378146 17281872 1963 - 17725628 I e calJac3.chr17 73835407 1651 + 74750902 I e cebCap1.NW_016107444v1 6371587 1961 + 6778120 I e canFam3.chr33 2319980 318 - 31377067 I e otoGar3.GL873829 206100 18 + 608964 I a score=838904.000000 s hg38.chr3_KI270934v1_alt 59257 123 + 163458 cgcaggtcgtgca-cggctttgcag-ctgttgtcaga-----gcttttcttctgagtgaaatgggagga-t-tggagcaaagaagtggtgtgttctgccttatgttgtaaaaagacagccctggctgacaca s panTro5.chr3 2531449 123 - 202621043 cgcaggtcgtgca-cggctttgcag-ctgttgtcaga-----gtttttctcctgagtgaaatgggagga-t-tggagcaaagaagtggtgtggtctgccttacgttgtaaaaagacagccctggctgacaca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121595 123 - 190779 cgcaggtcgtgca-cggctttgcag-ctgttgtcaga-----gtttttctcctgagtgaaatgggagga-t-tggagcaaagaagtggtgtggtctgccttacgttgtaaaaagacagccctggctgacaca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 72535 128 - 106623 cgcaggtcgtgca-tggctttgcag-ctgttgtcagaactctgcttttcttctgagtgaaatgggagga-t-tggagcaaagaagtggtggggtctgccttatgttgtaaaaagacagccctggctgacaca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2848229 128 - 123690457 cgcaggtcgtgca-tggctttgcaa-ccgttgtcagaactctgcttttcttctgagtgaaatgggagga-t-tggagcaaagaagtggtgtggtctgccttatgttgtaaaaagacagcccttgctgacaca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2344868 128 - 204787373 cgcaggttctgta-tggctttgtag-ccgttgtcagaactctgcttttcttctaagtgaaatgggagga-t-tggagcaaggaagtggtgtggtctgccttatgttgtaaaaagacagccctggctgacata i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192410033 128 - 192460366 cgcaggttctgta-tggctttgtag-ccgttgtcagaactctgcttttcttctaagtgaaatgggagga-t-tggagcaaggaagtggtgtggtctgccttatgttgtaaaaagacagccctggctgacata i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19149305 128 - 19675229 cgcaggttctgta-tggctttgtag-ccgttgtcagaactctgcttttcttctaagtgaaatgggagga-t-tggagcaaggaagtggtgtggtctgccttatgttgtaaaaagacagccctggctgacata i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16386248 128 - 16847902 cgcaggtcctgta-tggctttgcag-ccgttgtcagaactctgcttttcttctgagtgaaatgggagga-t-tggagcaaagaagtggtgtggtctgccttatgttgtaaaaagacagccctggctgacaca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91356280 128 + 91754291 cgcaggtcctgta-tggctttgcag-ccgttgtcagaactctacttttcttctgagtgaaatgggagga-t-tggagcaaagaagtggtgtggtctgccttatgttgtaaaaagacagccctggctgacaca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1422554 128 + 1977891 cgcaggtcctgta-tggctttgcag-ccgttgtcagaactctgcttttcttctgagtgaaatgggagga-t-tggagcaaagaagtggtgtggtctgccttatgttgtaaaaagacagccctggctgacaca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7362143 128 - 7796314 cgcaggtcatgta-tggctttgcag-cccttgtcagaactctgcttttcttctgagtgaaatgggagga-t-tggagcaaagaagtggtgtggtctgccttatgctgtaaaaagacagccctggctgacaca i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 14792873 130 - 22200726 tgccaatcatgta-cagctttgcagaccattgccagaacgccgcttttcctctgaatgagatgggaggatt-tggagcaaaggagtggcatgatctgccttccgttataaaaagacagctctggctgccata i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 32784526 121 + 98207768 tacccattattcacctgttctacaggctgttgcccaaacttggcttttcctctgaatgaaacggaagag-tatgaagcaca----------ggcctgccacatgctaggaagagaaatttccagctaacatc i mm10.chr16 C 0 C 0 e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e saiBol1.JH378146 17281872 1963 - 17725628 I e calJac3.chr17 73835407 1651 + 74750902 I e cebCap1.NW_016107444v1 6371587 1961 + 6778120 I e canFam3.chr33 2319980 318 - 31377067 I e otoGar3.GL873829 206100 18 + 608964 I a score=1877915.000000 s hg38.chr3_KI270934v1_alt 59380 265 + 163458 ctgggactagactggg-----gt--gggggctgagctggaaacagggagacctg-------t----------------agtagtgcaggtgagagatgatggcatcgtggaccatctcggtg--gtagcactggagatgctgag---gaggggccacattctgggcacagtttgatggccttagagccagcagaatttcct---------ggtgcaaaatgtgag------aggagaataaagaacggtgctgaggatttcggcctgagcacctgaaggatgcaactgacgttaactgagatggggaagatgcag s panTro5.chr3 2531572 250 - 202621043 ctgggactagactggg-----gt--gggggctgagctggaaacagggagacctg-------t----------------agtagtgcaggtgagagatgatggcatcgtggaccatctcggtg-----------------ctgag---gaggggccacattctgggcacagttagaaggccttagagccagcagaatttcct---------ggtgcaaaatgtgag------aggggaataaagaacggtgccgaggatttcggcttgagcaactgaaggatgcaattgatgttaactgagatggggaagatgcag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121718 265 - 190779 ctgggactagactggg-----gt--gggggctgagctggaaacagggagacctg-------t----------------agtagtgcaggtgagagatgatggcatcgtggaccatctcggtg--gtagcactggagatgctgag---gaggggccacattctgggcacagttagatggccttagagccagcagaatttcct---------ggtgcaaaatgtgag------aggggaataaagaacggtgccgaggatttcggcttgagcaactgaaggatgcaattgacgttaactgagatggggaagatgcag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 72663 265 - 106623 ctgggaccagactggg-----gt--gggggctgagctggaaacagggagacctg-------t----------------agtagtgcaggtgagagatgatggcatcgtggaccatctcggtg--gtagcactggagatgctgag---gaggggccacattctgggcacagtttgatggccttagagccagcagaatttcct---------ggtgcaaaatgtgag------aggggaataaagaacggtgccgaggatttcggcttgagcagctgaaggatgcaattgacgttaactgagatggggaagatgcag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2848357 265 - 123690457 ttgggactagactggg-----gt--gggggcagagctggaaacagggagacctg-------t----------------agtagtgcaggtgagagatgatggcatcgtggaccatctcggtg--gtagcactggagatgctgag---gaggggccacattctgggcatagtttgatggcagtagagccagcagaatttccc---------agtgcaaaatgtgag------ataggaataaagaacggtgccgcggatttcagcttgagcaactgaaggatgcaattgacattaactgagatggggaagatgcag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2344996 267 - 204787373 ttgggactagactggg-----gt--gggggcagagctggaaacaggaagacccg-------t----------------agtagtgcaggtgagagatgacggcatcgtggaccatcttggtg--gtagcactggagatgctgag---gaggggccagattctgggcacagtttgatggcagtagagccagcagaatttcct---------ggtgcaacatgtgagag----agaggaataaagaacagtgccgaggatttcggcttgagcaactgaaggatgcaattgacattaactgagatggggaagatgcag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192410161 267 - 192460366 ttgggactagactggg-----gt--gggggcagagctggaaacaggaagacccg-------t----------------agtagtgcaggtgagagatgacggcatcgtggaccatcttggtg--gtagcactggagatgctgag---gaggggccagattctgggcacagtttgatggcagtagagccagcagaatttcct---------ggtgcaacatgtgagag----agaggaataaagaacagtgccgaggatttcggcttgagcaactgaaggatgcaattgacattaactgagatggggaagatgcag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19149433 267 - 19675229 ttgggactagactggg-----gt--gggggcagagctggaaacaggaagacccg-------t----------------agtagtgcaggtgagagatgacggcatcgtggaccatcttggtg--gtagcactggagatgctgag---gaggggccagattctgggcacagtttgatggcagtagagccagcagaatttcct---------ggtgcaacacgtgagag----agaggaataaagaacagtgccgaggatttcggcttgagcaactgaaggatgcaattgacattaactgagatggggaagatgcag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16386376 267 - 16847902 ctggaactagactggg-----gt--gggggcagagctggaaacaggaagaccca-------t----------------agtagtgcaggtgagagatgacggcatcatggaccatcttggtg--gtagcactggagatgctgag---gaggggccagattctgggcacagtttgatgacagtagagccagcagaatttcct---------ggtgcaacatgtgagag----agaggaataaagaacagtgccgaggatttcggcttgagcaactgaaggatgcaattgacattaactgagatggggaagatgcag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91356408 267 + 91754291 ttggaactagactggg-----gt--gggggcagagctggaaacaggaagacctg-------t----------------agtagtgcaggttagagatgacggcatcgtggaccatcttgttg--gtagcactggagatgctgag---gaggggccagattctgggcacagtttgatggcagtagagccagcagaatttcct---------ggtgcaacatgtgagac----agaggaataaagaacagtgccgaggatttcggcttgagcaactgaaggatgcaattgatattaactgagatggggaagatgcag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1422682 267 + 1977891 ttggaactagactggg-----gt--gggggcagagctggaaacaggaagacccg-------t----------------agtagtgcaggtgagagatgacggcatcgtggaccatcttggtg--gtagcactggagatgctgag---gaggggccagattctgggcacagtttgatggcagtagagccagcagaatttcct---------ggtgcaacatgtgagag----agaggaataaagaacagtgccgaggatttcagcttgagcaactgaaggatgcaattgatattaactgagatggggaagatgcag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7362271 267 - 7796314 ttgggactagactggg-----gt--gggggcagagctggaaacagggagacctg-------t----------------agtagtgcaggtgagagatgacggcatcgtggaccatcttggtg--gtagcacaggagatgctgag---gaggggccagattctgggcacagtttgatggctgtagagccagcagaatttcct---------ggtgcaaaacgtgagag----agaggaataaagaacagtgccgaggatttcggcttcagcaactgaaggacgcaattgacattaactgagatggggaagatgcag i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 14793003 286 - 22200726 ttggaactagaccggg-----gttggggggcaaaggtggaaacagggagacccg-------tagtgactgtggactgcagtaatccaggtgagagatggtagcatcttacaccatcttggtg--atagcagtggaggggatgag---gaggggcgggattctgggcatagtttga-ggcagtagagccaacagaatttgcg---------gatgggaaacgtaagagaa--agaggaatgaagaatggtgccaaggatgctggcttgagcaactgaaggatgcaattgacattaactgagatggggaagacacag i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 32784647 259 + 98207768 cggggatgagagcgggtgttcag--gtgggcacaggtaccaacagggag-tctg-------t----------------agtcat---ggtgagagacagtagcatctcagcccacctgagtg--atggctgccgagatggcaagttcgtggggagag----tgggcattgttcga-ggaagagaaaccggttgaattttct---------tgtataaaatatgagaa----aggaaaatgattaatggttcag-------cggcaggagcggctgaagggtgcaagaggaatgaactgagcaaagggagacacag i mm10.chr16 C 0 I 961 s canFam3.chr33 2320298 275 - 31377067 CTGGGACGACACCGGG----CGT--gggggcaaaggtggaaagagagagccgcgagggtatc----------------aggaatccaggagagggacggtggcagctggg-----cttggagggggggcagtggagaggctga----gaaaggccggactctgg--agaatttgacaacaggagagccagtggaatcctctggcgagctgggtgtaaagagtgagggaactaggggaatgaagactggttttgagaactttggcttgagcaactgaaggacgtggctg-------ccaggagggagcggacacag i canFam3.chr33 I 318 C 0 e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e saiBol1.JH378146 17281872 1963 - 17725628 I e calJac3.chr17 73835407 1651 + 74750902 I e cebCap1.NW_016107444v1 6371587 1961 + 6778120 I e otoGar3.GL873829 206100 18 + 608964 I a score=81763.000000 s hg38.chr3_KI270934v1_alt 59645 11 + 163458 gtggggcaggt s panTro5.chr3 2531822 11 - 202621043 gtggggcaggt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121983 11 - 190779 gtggggcaggt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 72928 11 - 106623 gtggggcaggt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2848622 11 - 123690457 gtggggcaggt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2345263 11 - 204787373 gtggggcaggt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192410428 11 - 192460366 gtggggcaggt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19149700 11 - 19675229 gtggggcaggt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16386643 11 - 16847902 gtggggcaggt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91356675 11 + 91754291 gtggggcaggt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1422949 11 + 1977891 gtggggcaggt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7362538 11 - 7796314 gtggggcaggt i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 14793289 11 - 22200726 gtggagcaggt i proCoq1.NW_012133858v1 C 0 I 618 s canFam3.chr33 2320573 10 - 31377067 gcagagccgg- i canFam3.chr33 C 0 C 0 e mm10.chr16 32784906 961 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e saiBol1.JH378146 17281872 1963 - 17725628 I e calJac3.chr17 73835407 1651 + 74750902 I e cebCap1.NW_016107444v1 6371587 1961 + 6778120 I e otoGar3.GL873829 206100 18 + 608964 I a score=204856.000000 s hg38.chr3_KI270934v1_alt 59656 34 + 163458 ccagaggaaaagatcagaacttcgattttagaaa s panTro5.chr3 2531833 34 - 202621043 ccagaggaaaagatcagaacttcgattttagaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121994 34 - 190779 ccagaggaaaagatcagaacttcgattttagaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 72939 34 - 106623 ccagaggaaaagatcagagcttcgattttagaaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2848633 34 - 123690457 ccagaggaaaagatcagaactttgattttagaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2345274 34 - 204787373 ccagaggaagagatcagaacttcgattttagaAA i rheMac8.chr2 C 0 I 23 s macFas5.chr2 192410439 34 - 192460366 ccagaggaagagatcagaacttcgattttagaAA i macFas5.chr2 C 0 I 1 s macNem1.NW_012014355v1 19149711 34 - 19675229 ccagaggaagagatcagaacttcgattttagaAA i macNem1.NW_012014355v1 C 0 I 23 s cerAty1.NW_012004056v1 16386654 34 - 16847902 ccagacaaagagatcagaacttcgattttagaAA i cerAty1.NW_012004056v1 C 0 I 23 s chlSab2.chr15 91356686 34 + 91754291 ccagacgaagagatcagaactttgattttagaAA i chlSab2.chr15 C 0 I 23 s manLeu1.NW_012102020v1 1422960 34 + 1977891 ccagaggaagagatcagaacttcgattttagaAA i manLeu1.NW_012102020v1 C 0 I 23 s colAng1.NW_012118932v1 7362549 34 - 7796314 ccagaggaagagatcagaacttcgattttagaAA i colAng1.NW_012118932v1 C 0 I 23 s canFam3.chr33 2320583 34 - 31377067 cttgggatccagattaagactctggctttggacg i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e saiBol1.JH378146 17281872 1963 - 17725628 I e calJac3.chr17 73835407 1651 + 74750902 I e cebCap1.NW_016107444v1 6371587 1961 + 6778120 I e otoGar3.GL873829 206100 18 + 608964 I a score=3873.000000 s hg38.chr3_KI270934v1_alt 59690 5 + 163458 tgtgg s panTro5.chr3 2531867 5 - 202621043 cgtgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122028 5 - 190779 cgtgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 72973 5 - 106623 tgtgg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2848667 5 - 123690457 tgtgg i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 2320617 5 - 31377067 taccg i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e macNem1.NW_012014355v1 19149745 23 - 19675229 I e saiBol1.JH378146 17281872 1963 - 17725628 I e calJac3.chr17 73835407 1651 + 74750902 I e cebCap1.NW_016107444v1 6371587 1961 + 6778120 I e otoGar3.GL873829 206100 18 + 608964 I e colAng1.NW_012118932v1 7362583 23 - 7796314 I e manLeu1.NW_012102020v1 1422994 23 + 1977891 I e chlSab2.chr15 91356720 23 + 91754291 I e cerAty1.NW_012004056v1 16386688 23 - 16847902 I e macFas5.chr2 192410473 1 - 192460366 I e rheMac8.chr2 2345308 23 - 204787373 I a score=12467.000000 s hg38.chr3_KI270934v1_alt 59695 10 + 163458 aggccaggag s panTro5.chr3 2531872 10 - 202621043 aggccaggag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122033 10 - 190779 aggccaggag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 72978 10 - 106623 aggccaggag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2848672 10 - 123690457 aggccgggag i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73837058 10 + 74750902 Aggctgggca i calJac3.chr17 I 1651 C 0 s canFam3.chr33 2320622 10 - 31377067 aatgtaggaG i canFam3.chr33 C 0 I 42 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e macNem1.NW_012014355v1 19149745 23 - 19675229 I e saiBol1.JH378146 17281872 1963 - 17725628 I e cebCap1.NW_016107444v1 6371587 1961 + 6778120 I e otoGar3.GL873829 206100 18 + 608964 I e colAng1.NW_012118932v1 7362583 23 - 7796314 I e manLeu1.NW_012102020v1 1422994 23 + 1977891 I e chlSab2.chr15 91356720 23 + 91754291 I e cerAty1.NW_012004056v1 16386688 23 - 16847902 I e macFas5.chr2 192410473 1 - 192460366 I e rheMac8.chr2 2345308 23 - 204787373 I a score=379899.000000 s hg38.chr3_KI270934v1_alt 59705 375 + 163458 cagt-gctcattaactggaatcccagcactttgggaggccgaggtgggtggatcacttgaggtcaggagtttgagaccaggctggctgacacggtgaaactccgtctctac-taaaaatac-aaaaaattagccgagcatggtggtggca--cctgtagtcccagatactcaggaggctgaggcaggagaatcacgtgaacccaagaggtggagcttgcagtgagctgagatcacgccactgcactccagcctgggtgacagagccaggctcctttccatctcaaaaagaaaaaaaaaaagaaagaaatgttgaatgtgaggtatgtatttcatcaacatccaagtggagagattaagaattgaaatgaatacacAGTAT s panTro5.chr3 2531882 375 - 202621043 cggg-gctcattaactggaatcccagcactttgggaggccgaggcgggtgggtcacttgaggtcaggagtttgagaccaggctggctgacatggtgaaactccgtctctac-taaaaatac-aaaaaattagccgaacatggtggtggca--cctgtagtcccagctactcaggaggctgaggcaggagaatcacgtgaacccaagaggcggagcttgcagtgagctgagatcacgccactgcactccagcctgggcgacagagccaggctcctttccatctcaaaaaggaaaaaaaaaagaaagaaatgttgaatgtgaggtatgtatttcatcaacatccaagtggagagattaagaattgaaatgaatacacAGTAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122043 372 - 190779 cggg-gctcattaactggaatcccagcactttgggaggccgaggcgggtggatcacttgaggtcaggagtttgagaccaggctggctgacatggtgaaactccatctctac-taaaaatac-aaaaaattagccgaacatggtggtggca--cctgtagtcccagctactcaggaggctgaggcaggagaatcatgtgaacccaagaggcggagcttgcagtgagctgagatcacgccactgcactccagcctgggcgacagagccaggctcctttccatctcaaaaagg---aaaaaaagaaagaaatgttgaatgtgaggtatgtatttcatcaacatccaagtggagagattaagaattgaaatgaatacacAGTAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 72988 375 - 106623 cggt-gctcattaactggaatcccagcattttgggaggccgaggtgggtggatcacttgaggtcaggagtttgagaccaggctggctgacatggtgaaactccgtctctac-taaaaatac-aaaaaattagccgagcatggtggtggca--cctgtagtcccagctactcaggaggctgaggcaggagaatcacgtgaacccaagaggcggagcttgcagtgagctgagatcacgccactgcactccagcctgggcgacagagccaggctcctttccatctcaaaaaagaaaaaaaaaagaaagaaatgttgaatgtgaggtatgtatttcatcaacatccaagtggagagattaagaattgaaatgaatacacAGTAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2848682 375 - 123690457 tggt-gctca-tgcctggaatcccagcactttgggaggctgaggcgggtggatcacttgaggtcaggagtttgagaccaggctggccgacacggtgaaactccgtctctac-taaaaatacaaaaaaattagctgagcatggtggcggca--cctgtagtcccagctactcaggaggctgaggcaggagaatcacgtgaacccaagaggcggaggttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagcgagactccgttccatctcaaaaaaaaaaaagaaaagaaagaaatgttgcatgtgaggtatgtatttcatcaacatccaagtggagagattaagaattgaattgaatacacAGTAT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73837068 292 + 74750902 cagtggctca-tgcctgtaatcccagcactttgggaggctgaggcgggaggattccttgaactcagcagattgagacaaacctgggcaacatgggaaagtcccgtctctacagaaaaatac--aaaagttagccaggtgtggt----gcaactctgtggtcccagctactcgggaggctgaggtgggaggatcacccaagcatgggaggtcgaggctgcagtgagctgtggcagcaccactccactgcag-ttgggtgacagagtgaggccctgtctcaatttgaaaa-------------aataaaTTGTTg------------------------------------------------------------------- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e macNem1.NW_012014355v1 19149745 23 - 19675229 I e saiBol1.JH378146 17281872 1963 - 17725628 I e cebCap1.NW_016107444v1 6371587 1961 + 6778120 I e canFam3.chr33 2320632 42 - 31377067 I e otoGar3.GL873829 206100 18 + 608964 I e colAng1.NW_012118932v1 7362583 23 - 7796314 I e manLeu1.NW_012102020v1 1422994 23 + 1977891 I e chlSab2.chr15 91356720 23 + 91754291 I e cerAty1.NW_012004056v1 16386688 23 - 16847902 I e macFas5.chr2 192410473 1 - 192460366 I e rheMac8.chr2 2345308 23 - 204787373 I a score=6440.000000 s hg38.chr3_KI270934v1_alt 60080 5 + 163458 ACATT s panTro5.chr3 2532257 5 - 202621043 ACACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122415 5 - 190779 ACACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 73363 5 - 106623 ACACT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2849057 5 - 123690457 ACACT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192410474 5 - 192460366 ACACT i macFas5.chr2 I 1 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e macNem1.NW_012014355v1 19149745 23 - 19675229 I e saiBol1.JH378146 17281872 1963 - 17725628 I e calJac3.chr17 73837360 0 + 74750902 C e cebCap1.NW_016107444v1 6371587 1961 + 6778120 I e canFam3.chr33 2320632 42 - 31377067 I e otoGar3.GL873829 206100 18 + 608964 I e colAng1.NW_012118932v1 7362583 23 - 7796314 I e manLeu1.NW_012102020v1 1422994 23 + 1977891 I e chlSab2.chr15 91356720 23 + 91754291 I e cerAty1.NW_012004056v1 16386688 23 - 16847902 I e rheMac8.chr2 2345308 23 - 204787373 I a score=16746.000000 s hg38.chr3_KI270934v1_alt 60085 11 + 163458 AATAATAATAG s panTro5.chr3 2532262 11 - 202621043 AATAATAATAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122420 11 - 190779 AATAATAATAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 73368 11 - 106623 AATAATAATAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2849062 11 - 123690457 AATAATAATAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192410479 11 - 192460366 AATAATAATAG i macFas5.chr2 C 0 I 6 s saiBol1.JH378146 17283835 10 - 17725628 aaaaataata- i saiBol1.JH378146 I 1963 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e macNem1.NW_012014355v1 19149745 23 - 19675229 I e calJac3.chr17 73837360 0 + 74750902 C e cebCap1.NW_016107444v1 6371587 1961 + 6778120 I e canFam3.chr33 2320632 42 - 31377067 I e otoGar3.GL873829 206100 18 + 608964 I e colAng1.NW_012118932v1 7362583 23 - 7796314 I e manLeu1.NW_012102020v1 1422994 23 + 1977891 I e chlSab2.chr15 91356720 23 + 91754291 I e cerAty1.NW_012004056v1 16386688 23 - 16847902 I e rheMac8.chr2 2345308 23 - 204787373 I a score=1948865.000000 s hg38.chr3_KI270934v1_alt 60096 286 + 163458 CTGTATATAAggctgggcacagtggctcatgtctgtaatcccagcactttgcgagtctgaggcaggaggactgcttgagctcagaagatcgagaccaacctggtcaacatggtaaagccccttttttac-aaaacaaagtacaaaaattagccag----------------ctgtggtcccagctcctcaggaggctgaggtgggaggatcactggagc-tgggaggtggaggctgcagtgagccatggtcgcaccactgcactgcagtttgggt---gagagtgagaccctgtctc---------------------aattttaaaa--- s panTro5.chr3 2532273 287 - 202621043 CTGTATATAAggctgggcacagtggctcatgtctgtaatcccagcactttgcgagtctgaggcaggaggactgcttgagctcagaagatagagaccaacctgatcaacatggtaaagccccttttttac-aaaaaaaagtacaaaaattagccag----------------ctgtggtcccagctcctcaggaggctgaggtgggaggatcactggagcctgggaggtggaggctgcagtgagccatggccgcaccactgcactgcagtttgggt---gagagtgagaccctgtctc---------------------gatttaaaaa--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122431 286 - 190779 CTGTATATAAggctgggcacagtggctcatgtctgtaatcccagcactttgcgagtctgaggcaggaggactgcttgagctcagaagatagagaccaacctgatcaacatggtaaagccccttttttac-aaaa-aaagtacaaaaattagccag----------------ctgtggtcccagctcctcaggaggctgaggtgggaggatcactggagcctgggaggtggaggctgcagtgagccatggccgcaccactgcactgcagtttgggt---gagagtgagaccctgtctc---------------------aattttaaaa--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 73379 286 - 106623 CTGTATATAAggctgggcacagtggctcatgtctgtaat-ccagcactttgcgagtctgaggcaggaggactgcttgagctcagaagatcgagaccaacctgatcaacatggtaaagccccttttttac-aaaaaaaagtacaaaaattagccag----------------ctgtggtcccagctcctcaggaggctgaggtgggaggatcactggagcctgggaggtggaggctgcagtgagccatggtcgcaccactgcactgcagtttgggt---gagagtgagagcctgtctc---------------------aattttaaaa--- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2849073 301 - 123690457 CTGTATATAAggctgggcacagtggctcatgcctgtaatcccagcactttgcgagtctgaggcaggaggattgcttgagctcaggagatcgagatcaacctggtcaacatggtaaagccccttctttac-aaaaaaaagtacaaaaatcagtcaggtgtggtggcgcac--ctgtggtcccagctcctcaggaggctgaggtgggaggatcactggagcctgggaggtggaggctgcagtaagccatggtcgcaccactgcactgcagtttgggt---gagagtgagaccctgtctc---------------------aatttaaaaa--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2345331 300 - 204787373 CTGTATATAAggctgggcacaggggctcatgcctgtaatcccagcactttgtgagtctgagacaggaggattgcttgagctcaggagatcgagaccaacctggtcaacatggtaaagccccttctttac-aaaa-aaagtacaaaaattagccaggtgtggtggcacat--ctgtggtcccagctcctcaggaggctaagatgggaggatcactggagcctgggaggttaaggctgcagtgtgccatggtcgcaccactgcactgcagtttgggt---gagagtgagaccctgtctc---------------------tattttaaaa--- i rheMac8.chr2 I 23 C 0 s macFas5.chr2 192410496 300 - 192460366 CTGTATATAAggctgggcacaggggctcatgcctgtaatcccagcactttgtgagtctgagacaggaggattgcttgagctcaggagatcgagaccaacctggtcaacatggtaaagccccttctttac-aaaa-aaagtacaaaaattagccaggtgtggtggcgcat--ctgtggtcccagctcctcaggaggctaagatgggaggatcactggagcctgggaggttaaggctgcagtgtgccatggtcgcaccactgcactgcagtttgggt---gagagtgagaccctgtctc---------------------tattttaaaa--- i macFas5.chr2 I 6 C 0 s macNem1.NW_012014355v1 19149768 300 - 19675229 CTGTATATAAggctgggcacaggggctcatgcctgtaatcccagcactttgtgagtctgagacaggaggattgcttgagctcaggagatcgaggccaacctggtcaacatggtaaagccccttctttac-aaaa-aaagtacaaaaactagccaggtgtggtggtgcat--ctgtggtcccagctcctcaggaggctaagatgggaggatcactggagcctgggaggttaaggctgcagtgtgccatggtcgcaccactgcactgcagtttgggt---gagagtgagaccctgtctc---------------------tattttaaaa--- i macNem1.NW_012014355v1 I 23 C 0 s cerAty1.NW_012004056v1 16386711 300 - 16847902 CTGTATATAAggctgggcacaggggctcatgcctgtaatcccagcactttgtgagtcggagacaggaggattgcttgagctcaggagatcgagaccaacctggtcaacatgataaagccccttctttac-aaaa-aaagtacaaaaattagccaggtgtggtggcgcat--ctgtggtcccagctcctcaggaggctaagacgggaggatcactggagcctgggaggttgaggctacagtgagccatggtcgcaccactgcactgcagtttgagt---gagagtgagaccctgtctc---------------------tattttaaaa--- i cerAty1.NW_012004056v1 I 23 C 0 s chlSab2.chr15 91356743 300 + 91754291 CTGTATATAAggctgggcacaggggctcatgcctgtaatcccagcactttgtgagtctgagacaggaggattgcttgagctcaggagatcgagaccaacctggtcaacatggtaaagccccttctttac-aaaa-aaagtacaaaaattagccaggtgtggtggcacat--ctgtggtcccagctcctcaggaggctaagacgggaggatcactggagcctgggaggttgaggctgcagtgagccatggtcgcaccactgcactgcagtttgagt---gagagtgagaccctgtctc---------------------TATTTTTAAA--- i chlSab2.chr15 I 23 C 0 s manLeu1.NW_012102020v1 1423017 300 + 1977891 CTGTATATAAggctgggcacaggggctcatgcctgtaatcccagcactttgtgagtcggagacaggaggattgcttgagctcaggagatcgagaccaatctggtcaacatggtaaagccccttctttac-aaaa-aaagtacaaaaattagccaggtgtggtggcacat--ctgtggtcccagctcctcaggaggctaagacgggaggatcactggagcctgggaggttgaggctgcagtgagccatggtcacaccactgcactgcagtttgagt---gagagtgagaccctgtctc---------------------tattttaaaa--- i manLeu1.NW_012102020v1 I 23 C 0 s colAng1.NW_012118932v1 7362606 297 - 7796314 CTGTATATAAgactgggcacaggggctcatgcctgtaatcccagcactttgcgagtctgagacaggaggattgcttgagctcaggagattgagactaacctagtcaacatggtaaagccccttctttacaaaaa-aaagtacaaaaattagccaggtgtggtggcgcat--ctgcggtcccagctcctcaggaggctaagat----ggatcactgtagcctgggaggttgaggctgcagtgagccatggtcgcaccactgcactgcagtttgggt---gagagtgagaccctgtctc---------------------aattttaaaa--- i colAng1.NW_012118932v1 I 23 C 0 s calJac3.chr17 73837360 303 + 74750902 -----------gccaggtgcagtggctcacgccggtaatctcagcaccttgggaggccaagacaggcggatcacctgaggtcaagagtttgagaccagcctgaccaacatggagaaacgccatctctac-taaa-agtaaa-aaaaattagctggatgtgatggtgcatgcctgtagtcccagcaactcgggcggctgaggcaggagaaccacttgaatcagagaggcagaggttgccgtgacccaagatcatgccactgcactccatgctgggcaacaagagtgaaacttcatctcaaa--------------aaataataataaaataa i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17283845 320 - 17725628 ------ataaTgccgggcgcggtggctcaagcctgtaatcccagcactttgggaggccgaggcgggtggatcac--aaggtcaagagatcgagaccatcccggtcaacatggtgaaaccccgtctctac-taaa-aataca-aaaaattagctgggcatggtggtgtgcgcctgtaatcccagctactcaggaggctgaggcaggagaattgcctgaacccaggaggtggaggttgcggtgagccgagatcatgccattgcactccagcctaggtaacaagagcgaaactcctcctcaaaataaataaataaataaataataataaaataa i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e cebCap1.NW_016107444v1 6371587 1961 + 6778120 I e canFam3.chr33 2320632 42 - 31377067 I e otoGar3.GL873829 206100 18 + 608964 I a score=60739.000000 s hg38.chr3_KI270934v1_alt 60382 8 + 163458 aataaaTC s panTro5.chr3 2532560 8 - 202621043 aataaaTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122717 8 - 190779 aataaaTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 73665 8 - 106623 aataaaTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2849374 8 - 123690457 aataaaTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2345631 8 - 204787373 aataaaTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192410796 8 - 192460366 aataaaTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19150068 8 - 19675229 aataaaTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16387011 8 - 16847902 aataaaTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91357043 8 + 91754291 AATAAATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1423317 8 + 1977891 aataaaTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7362903 8 - 7796314 aataaaTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73837663 7 + 74750902 aataaaC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284165 8 - 17725628 aGTAAACT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6373548 8 + 6778120 aataaaCT i cebCap1.NW_016107444v1 I 1961 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e canFam3.chr33 2320632 42 - 31377067 I e otoGar3.GL873829 206100 18 + 608964 I a score=64994.000000 s hg38.chr3_KI270934v1_alt 60390 8 + 163458 GTTGTATC s panTro5.chr3 2532568 8 - 202621043 GTTGTATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122725 8 - 190779 GTTGTATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 73673 8 - 106623 GTTGTATC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2849382 8 - 123690457 GTTGTGTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2345639 8 - 204787373 GTTGTATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192410804 8 - 192460366 GTTGTATC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19150076 8 - 19675229 GTTGTATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16387019 8 - 16847902 GTTGTATC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91357051 8 + 91754291 GTTGTATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1423325 8 + 1977891 GTTGTATC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7362911 5 - 7796314 ---GTATC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73837670 7 + 74750902 -TTGTGTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284173 8 - 17725628 GTTGTATA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6373556 8 + 6778120 GTTGTGTA i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 2320674 8 - 31377067 GCTGTGTA i canFam3.chr33 I 42 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e aotNan1.NW_018503669v1 9541 2356 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e otoGar3.GL873829 206100 18 + 608964 I a score=208785.000000 s hg38.chr3_KI270934v1_alt 60398 23 + 163458 TAAGAGGTGGGA-TTATAGAAAAG s panTro5.chr3 2532576 23 - 202621043 TAAGAGGTGGGA-TTATAGAAAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122733 23 - 190779 TAAGAGGTGGGA-TTATAGAAAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 73681 23 - 106623 TAAGAGGTGGGA-TTATAGAAAAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2849390 23 - 123690457 TAAGTGATGGGA-TTATAGAAAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2345647 23 - 204787373 TAAGAGGTGGGA-TTATAGGACAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192410812 23 - 192460366 TAAGAGGTGGGA-TTATAGGACAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19150084 23 - 19675229 TAAGAGGTGGGA-TTATAGGACAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16387027 23 - 16847902 TAAGAGGTGGGA-TTATAGGACAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91357059 23 + 91754291 TAAGAGGTGGGA-TTATAGGACAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1423333 23 + 1977891 TAAGAGGTGGGA-TTATAGGACAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7362916 23 - 7796314 TAAGAGGTGGGA-TTATAGAAAAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73837677 23 + 74750902 TAAGAGGTGGGA-TTATAGACAAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284181 23 - 17725628 TAAGAGGTGGGA-TTATAGACAAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6373564 23 + 6778120 TAAGAGGTGCGA-TTATAGACAAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 11897 23 + 69927 TAAGAGGTGGGA-TTATAGACAAC i aotNan1.NW_018503669v1 I 2356 C 0 s canFam3.chr33 2320682 22 - 31377067 TAGGAAGTGGGGCTTACAGATG-- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e otoGar3.GL873829 206100 18 + 608964 I a score=906759.000000 s hg38.chr3_KI270934v1_alt 60421 76 + 163458 TTTTTCTTTC--TCCTCTTCCCACTTCTTACTTTGCTT-----------GGTCTTTG-GAATATTTCAAAA-TTTTGAAATCATAAACAAG s panTro5.chr3 2532599 76 - 202621043 TTTTTCTTTC--TCCTCTTCCCACTTCTTACTTTGCTT-----------GGTCTTTG-GAATATTTCAAAA-TTTTGAAATCATAAACAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122756 76 - 190779 TTTTTCTTTC--TCCTCTTCCCACTTCTTACTTTGCTT-----------GGTCTTTG-GAATATTTCAAAA-TTTTGAAATCATAAACAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 73704 76 - 106623 TTTTTCTTTC--TCCTCTTCCCACTTCTTACTTTGCTT-----------GGTCTTTG-GAATATTTCAAAA-TTTTGAAATCATAAACAAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2849413 76 - 123690457 TTTTTCTTTC--TCCTCTTCCCACTTCTTACTTTGCTT-----------GGTCTTTG-GAATTTTTCAAAA-TTTTGAAATCATAAACAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2345670 76 - 204787373 GTTTTCTTTC--TCCTCTTCCCACTTCTTACTTTGCTT-----------GGTCTTTG-GAATTTTTCAAAA-TTTTGAAATCATAAACAAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192410835 76 - 192460366 GTTTTCTTTC--TCCTCTTCCCACTTCTTACTTTGCTT-----------GGTCTTTG-GAATTTTTCAAAA-TTTTGAAATCATAAACAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19150107 76 - 19675229 GTTTTCTTTC--TCCTCTTCCCACTTCTTACTTTGCTT-----------GGTCTTTG-GAATTTTTCAAAA-TTTTGAAATCATAAACAAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16387050 76 - 16847902 GTTTTCTTTC--TCCTCTTCCCACTTCTTACTTTGCTT-----------GGTCTTTG-AAATTTTTCAAAA-TTTTGAAATCATAAACAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91357082 76 + 91754291 GTTTTCTTTC--TCCTCTTCCCACTTCTTACTTTGCTT-----------AGTCTTTG-GAATTTTTCAAAA-TTTTGAAATCATAAACAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1423356 76 + 1977891 GTTTTCTTTC--TCCTCTTCCCACTTCTTACTTTGCTT-----------GGTCTTTG-GAATTTTTCAAAA-TTTTGAAATCATAAACAAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7362939 76 - 7796314 GTTTTCTTTC--TCCTCTTCCCACTTCTTACTTTGCTT-----------GGTCTTTG-GAATTTTTCAAAA-TTTTGAAATCATAAGCAAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73837700 76 + 74750902 TTTTTCTTTC--TCTTCTTCCTACTTCTTACTTTGCTT-----------GGTCTTTG-GAATTTTTAAAAA-TTTTGAAATCATAAGCAAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284204 76 - 17725628 TCTTTCTTTC--TCTTCTTCCTACTTCTTACTTTGCTT-----------GGTCTTTG-AAATTTTTTTAAA-TTTTGAAATCATAAGCAAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6373587 76 + 6778120 TTTTTCTTTC--TCTTCTTCCTACTTCTTACTTTGCTT-----------GGTCTTTG-GAATTTTTAAAAA-TTTTGAAATCATAAGCAAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 11920 76 + 69927 TTTTTCTTTC--TCTTCTTCCTAACTCTTACTTTGCTT-----------GGTCTTTG-GAATTTTTAAAAA-TTTTGAAATCATAAGCAAG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 206118 80 + 608964 TTTCTCTTTCCTTCTTCTTCCCACTTCTTTTTTCACTT-----------GGCCTTTTCGAATTTTTCAAAATTTTTAAAATCATAAGCAAG i otoGar3.GL873829 I 18 C 0 s canFam3.chr33 2320704 83 - 31377067 TTTTTCTTTC--TC----TCCCACTTCTCTTTCTGCCTTTTTTTTCTCGGTCCTTTT-GAATTTTTCAAAA-TCGTGAACTCACAAGCAAG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I a score=37408.000000 s hg38.chr3_KI270934v1_alt 60497 4 + 163458 -tttt s panTro5.chr3 2532675 4 - 202621043 -tttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122832 4 - 190779 -tttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 73780 4 - 106623 -tttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2849489 4 - 123690457 -tttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2345746 4 - 204787373 -tttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192410911 4 - 192460366 -tttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19150183 4 - 19675229 -tttt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16387126 4 - 16847902 -TTTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91357158 4 + 91754291 -TTTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1423432 4 + 1977891 -tttt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7363015 4 - 7796314 -TTTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73837776 4 + 74750902 -TTTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284280 4 - 17725628 -TTTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6373663 4 + 6778120 -TTTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 11996 4 + 69927 -GTTT i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 2320787 4 - 31377067 GTTT- i canFam3.chr33 C 0 I 202 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e otoGar3.GL873829 206198 0 + 608964 C a score=87340.000000 s hg38.chr3_KI270934v1_alt 60501 10 + 163458 actttta-----ttt s panTro5.chr3 2532679 10 - 202621043 actttta-----ttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122836 10 - 190779 actttta-----ttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 73784 10 - 106623 actttta-----ttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2849493 10 - 123690457 actttta-----ttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2345750 10 - 204787373 actttta-----ttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192410915 10 - 192460366 actttta-----ttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19150187 10 - 19675229 actttta-----ttt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16387130 10 - 16847902 ACTTTTA-----TTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91357162 10 + 91754291 ACTTTTA-----TTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1423436 10 + 1977891 actttta-----ttt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7363019 10 - 7796314 ACtttta-----ttt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73837780 15 + 74750902 GCTTTTAtttcattt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284284 6 - 17725628 ACt---------ttt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6373667 10 + 6778120 ACTTTTA-----ttt i cebCap1.NW_016107444v1 C 0 I 170 s aotNan1.NW_018503669v1 12000 10 + 69927 ACTTTTA-----ttt i aotNan1.NW_018503669v1 C 0 I 142 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e canFam3.chr33 2320791 202 - 31377067 I e otoGar3.GL873829 206198 0 + 608964 C a score=902135.000000 s hg38.chr3_KI270934v1_alt 60511 149 + 163458 taaatt----------------tatttatttatgagacagagtcttgcccttttgcccaggctggggtgcagtggtaggatcttgggtcactgcaacctctgcctcccgggttcaagtgattctcccgtctcagcctcctgggtagctgg-gattactggcacctg s panTro5.chr3 2532689 149 - 202621043 taaatt----------------tatttatttatgagacagagtcttgcccttttgcccaggctggggtgcagtggcaggatcttggctcactgcaacctctgcctcccgggttcaagtgattctcccgtctcagcctcctgggtagctgg-gattacaggcacctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122846 149 - 190779 taaatt----------------tatttatttatgagacagagtcttgcccttttgcccaggctggggtgcagtggcaggatcttggctcactgcaacctctgcctcccgggttcaagtgattctcccgtctcagcctcctgggtagctgg-gattacaggcacctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 73794 149 - 106623 taaatt----------------tatttatttatgagacagagtcttgcccttttgcccaggctggggtgcagtggtaggatcttgggtcactgcaacctctgcctcccgggttcaagtgattctcccgtctcagcctcctgggtagctgg-gattacaggcacctg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2849503 148 - 123690457 taagtt----------------tatttatttatgagacagggtcttgccctttcgcccaggctggagggcagtttcgggatcttggg-cactgcaacctccgcctcccgggttcaagcgattctcccgcctcagactccctggtagctgg-gattacaggcacctg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2345760 165 - 204787373 taaatttatttatttatctatttatttatttatgagacagagtcttgccctttcacccaggctggagtgcagcggcgggatcctgggtcactgcaacctctgcttctcaggttcaagcaattctcctgcctcagcctcccgagtagctag-gattacaggcccctg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192410925 165 - 192460366 taaatttatttatttatctatttatttatttatgagacagagtcttgccctttcacccaggctggagtgcagcggcgggatcctgggtcactgcaacctctgcttctcaggttcaagcaattctcctgcctcagcctcccgagtagctag-gattacaggcccctg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19150197 165 - 19675229 taaatttatttatttatctatttatttatttatgagacagagtcttgccctttcacccaggctggagtgcagcggcgggatcctgggtcactgcaacctctgcttctcaggttcaagcaattctcctgcctcagcctcccgagtagctag-gattacaggcccctg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16387140 161 - 16847902 TAAAtttatttatttata----tatttatttatgagacagagtcttgccctttcacccaggctggagtgtagcggcgggatcttgggtcactgcaacctctgcttctcaggttcaagcaattctcctgcctcagcctcccgagtagctag-gattacaggcacctg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91357172 161 + 91754291 TAA----Atttatttatttatatatttatttatgagacagagtcttgccctttcacccaggctggagtgtagcagtgggatcttgggtcactgcaacctctgcttctcaggttcaagcaattctcctgcctcagcctcccaagtagctag-gattacaggcacctg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1423446 165 + 1977891 taaatttatttatttatttatatatttatttatgagacagagtcttgccctttcacccaggctggagtgtagcggcgggatcttgggtcactgcaacctctgcttctcaggttcaagcaattctcctgcctcagcctcccgagtagctag-gattacaggcacctg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7363029 153 - 7796314 taaatttatt------------tatttatttatgagacagagtcttgccctttca-ccaggctggagtgcagcggcaggatcttgggtcactgcaacctctgcttctcaggttcaagcaattctcctgcctcagcctcccgagtagttaacgattacaggcacctg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73837795 141 + 74750902 ------------tatctttattcatttatttttt-----gggtctcaccttgtcacc------ggagtgcagaggcgtgatctcagctgactgcaatctccatctcccgggttcaagtgatcctcccacctcagtcgcgagagtacctgg-ga-tacaggtgtgcg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284290 140 - 17725628 ------------catctttattcatttatttttt-----gggtctcaccttgtcacc------agagtgcagaggcgtgatctcagctgactgcaatctccatctcccgggttcaagtgatcctcccgcctcagtcgc-agagcacctgg-ga-tacaggtgtgca i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e aotNan1.NW_018503669v1 12010 142 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e cebCap1.NW_016107444v1 6373677 170 + 6778120 I e canFam3.chr33 2320791 202 - 31377067 I e otoGar3.GL873829 206198 0 + 608964 C a score=209181.000000 s hg38.chr3_KI270934v1_alt 60660 26 + 163458 ccaccacacccagctaattttcgtgt s panTro5.chr3 2532838 26 - 202621043 ccaccacacccagctaattttcgtgt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122995 26 - 190779 ccaccacacccagctaattttcgtgt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 73943 26 - 106623 ccaccacacccagctaattttcgtgt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2849651 26 - 123690457 ccaccacgcccagctaatttttgtgt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2345925 26 - 204787373 ccacgacacccagctaatttctgtgt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192411090 26 - 192460366 ccacgacacccagctaatttctgtgt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19150362 26 - 19675229 ccacgacacccagctaatttctgtgt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16387301 26 - 16847902 ccaccacacccagctaatttctgtgt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91357333 26 + 91754291 ccaccacacccagctaatttctgtgt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1423611 26 + 1977891 ccaccacacccagctaatgtctgtgt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7363182 26 - 7796314 ccaccacgcccagctaatttctgtgt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73837936 26 + 74750902 ccattacacctagctaatttgtgtat i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284430 26 - 17725628 ccattacagcccgctaatttgtgtat i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 12152 26 + 69927 ccactacacccagctaatttgtgtat i aotNan1.NW_018503669v1 I 142 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e cebCap1.NW_016107444v1 6373677 170 + 6778120 I e canFam3.chr33 2320791 202 - 31377067 I e otoGar3.GL873829 206198 0 + 608964 C a score=862694.000000 s hg38.chr3_KI270934v1_alt 60686 93 + 163458 ttttagtagagacggggtttcaccatgttggccaggctagtctcaaactc----ctgacctc--gtgatccaccggcctcggcctcccaaagtgctggg s panTro5.chr3 2532864 93 - 202621043 ttttagtagagacggggtttcaccatgttggccaggctagtctcaaactc----ctgacctc--gtgatccaccggcctcggcctcccaaagtgctggg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123021 93 - 190779 ttttagtagagacggggtttcaccatgttggccaggctagtctcaaactc----ctgacctc--gtgatccaccggcctcggcctcccaaagtgctggg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 73969 92 - 106623 ttttagtagagacggggtttcaccatgttggccaggctagtctcaaactc----ctgacctc--gtgatccaccggcct-ggcctcccaaagtgctggg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2849677 93 - 123690457 ttttagtagagacggggtttcaccatgttggccaggctagtctcaaactc----ctgacctc--atgatccaccggcctcggcctcccaaagtgctggt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2345951 93 - 204787373 tttttgtagagacagagtttcaccatgctggccaggttggtctcaaactc----ctgacctc--gtgatccgcctgcctcggcctcccaaagtgctggg i rheMac8.chr2 C 0 I 319 s macFas5.chr2 192411116 93 - 192460366 tttttgtagagacagagtttcaccatgctggccaggttggtctcaaactc----ctgacctc--gtgatccgcctgcctcggcctcccaaagtgctggg i macFas5.chr2 C 0 I 319 s macNem1.NW_012014355v1 19150388 93 - 19675229 tttttgtagagacagagtttcaccatgctggccaggttggtctcaaactc----ctgacctc--gtgatccgcctgcctcggcctcccaaagtgctggg i macNem1.NW_012014355v1 C 0 I 319 s cerAty1.NW_012004056v1 16387327 93 - 16847902 tttttgtagagacggggtttcaccatgctggccaggctggtctcaaactc----ctgacctc--gtgatccgcctgcctcggcctcccaaagtgctggg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91357359 93 + 91754291 tttttgtagagacagggtttcaccatgctggccaggctggtctcaaactc----ctgacctc--gtgatctgcctgcctcggcctcccaaagtgctggg i chlSab2.chr15 C 0 I 319 s manLeu1.NW_012102020v1 1423637 93 + 1977891 tttttgtagagacggggtttcaccatgctggccaggctggtctcaaactc----ctgacctc--gtgatctgcctgcctcggcctcccaaagtgctggg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7363208 93 - 7796314 tttttgtagagacagggtttcaccatgctggccaggctggtctcaaactc----ctgacctc--gtgatccgcctgcctcggcctcccaaagtgctggg i colAng1.NW_012118932v1 C 0 I 319 s calJac3.chr17 73837962 94 + 74750902 -ttttgtagagacagagtttcaccatgttacccaggccagtctcagactc----ctgagctcaagcgatccgcccagctcagccttccaaagtcctggg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284456 94 - 17725628 -ttttgtagagacggagtttcaccatgttacccaggccagtctcagactc----ctgagctcaagcgatccccacacctcagccttccaaagtgctggg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6373847 99 + 6778120 tttttgtagaggcggagtttcaccacgttacccaggccagtctcagactcctgactgagctcaagcaatccacccacctcagccttccaaagcgctggg i cebCap1.NW_016107444v1 I 170 C 0 s aotNan1.NW_018503669v1 12178 94 + 69927 -ttttgtagagatggagtttcaccatgttacccaggccagtctcagactc----ctgagctcaagcgatccactcacctcagccttccaaagtgctggg i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e canFam3.chr33 2320791 202 - 31377067 I e otoGar3.GL873829 206198 0 + 608964 C a score=10920.000000 s hg38.chr3_KI270934v1_alt 60779 1 + 163458 a s panTro5.chr3 2532957 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123114 1 - 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 74061 1 - 106623 a i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2849770 1 - 123690457 a i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2346363 1 - 204787373 a i rheMac8.chr2 I 319 C 0 s macFas5.chr2 192411528 1 - 192460366 a i macFas5.chr2 I 319 C 0 s macNem1.NW_012014355v1 19150800 1 - 19675229 a i macNem1.NW_012014355v1 I 319 C 0 s cerAty1.NW_012004056v1 16387420 1 - 16847902 a i cerAty1.NW_012004056v1 C 0 I 421 s chlSab2.chr15 91357771 1 + 91754291 a i chlSab2.chr15 I 319 C 0 s manLeu1.NW_012102020v1 1423730 1 + 1977891 a i manLeu1.NW_012102020v1 C 0 I 319 s colAng1.NW_012118932v1 7363620 1 - 7796314 a i colAng1.NW_012118932v1 I 319 C 0 s calJac3.chr17 73838056 1 + 74750902 a i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284550 1 - 17725628 a i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6373946 1 + 6778120 a i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 12272 1 + 69927 a i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e canFam3.chr33 2320791 202 - 31377067 I e otoGar3.GL873829 206198 0 + 608964 C a score=90648.000000 s hg38.chr3_KI270934v1_alt 60780 9 + 163458 ttacaggcg s panTro5.chr3 2532958 9 - 202621043 ttaccggcg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123115 9 - 190779 ttacaggcg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 74062 9 - 106623 ttacaggcg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2849771 9 - 123690457 ttacaggca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2346364 9 - 204787373 ttacaggca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192411529 9 - 192460366 ttacaggca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19150801 9 - 19675229 ttacaggca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16387842 9 - 16847902 ttacaggca i cerAty1.NW_012004056v1 I 421 C 0 s chlSab2.chr15 91357772 9 + 91754291 ttacaggca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1424050 9 + 1977891 ttacaggca i manLeu1.NW_012102020v1 I 319 C 0 s colAng1.NW_012118932v1 7363621 9 - 7796314 ttacaggca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73838057 9 + 74750902 ttacaggca i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284551 9 - 17725628 tgacaggca i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6373947 9 + 6778120 ttacaggca i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 12273 9 + 69927 ttacaggca i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e canFam3.chr33 2320791 202 - 31377067 I e otoGar3.GL873829 206198 0 + 608964 C a score=161007.000000 s hg38.chr3_KI270934v1_alt 60789 18 + 163458 tgagccact---gagcc---tggc s panTro5.chr3 2532967 18 - 202621043 tgagccact---gagcc---tggt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123124 18 - 190779 tgagccact---gagcc---tggt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 74071 18 - 106623 tgagccact---gagac---tggc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2849780 18 - 123690457 tgagccact---gtgcc---cggc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2346373 18 - 204787373 tgagccagt---gtgcc---tgac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192411538 18 - 192460366 tgagccagt---gtgcc---tgac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19150810 18 - 19675229 tgagccagt---gtgcc---tgac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16387851 18 - 16847902 tgagccagt---gtgcc---tggc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91357781 18 + 91754291 tgagccagt---gtgcc---tggc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1424059 18 + 1977891 tgagccagt---gtgcc---tggc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7363630 18 - 7796314 tgagccagt---gtgcc---tggc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73838066 18 + 74750902 tgagccact---gcacc---tggc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284560 18 - 17725628 cgagccact---gcacc---tggc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6373956 18 + 6778120 tgagccact---gcacc---tggc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 12282 18 + 69927 tgagccact---gtacc---tggc i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 2320993 24 - 31377067 tgagccacccaggagccccATAAC i canFam3.chr33 I 202 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e micMur3.chr1 88385260 2729 + 114275543 I e dasNov3.JH569502 2699052 1448 - 6579706 I e otoGar3.GL873829 206198 0 + 608964 C a score=105759.000000 s hg38.chr3_KI270934v1_alt 60807 10 + 163458 cAAGTTTTAC s panTro5.chr3 2532985 10 - 202621043 cAAGTTTTAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123142 10 - 190779 cAAGTTTTAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 74089 10 - 106623 cAAGTTTTAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2849798 10 - 123690457 cAAGTTTTAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2346391 10 - 204787373 cAAGTTTTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192411556 10 - 192460366 cAAGTTTTAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19150828 10 - 19675229 cAAGTTTTAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16387869 10 - 16847902 cAAGTTTTAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91357799 10 + 91754291 cAAGTTTTAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1424077 10 + 1977891 cAAGTTTTAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7363648 10 - 7796314 cAAGTTTTAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73838084 4 + 74750902 cAAG------ i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284578 10 - 17725628 cAAGTTTTAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6373974 10 + 6778120 cAAGTTTTAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 12300 10 + 69927 cAAGTTTCAC i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 2321017 10 - 31377067 CACATTTAAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2700500 10 - 6579706 caagctttac i dasNov3.JH569502 I 1448 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e micMur3.chr1 88385260 2729 + 114275543 I e otoGar3.GL873829 206198 0 + 608964 C a score=2070955.000000 s hg38.chr3_KI270934v1_alt 60817 217 + 163458 TTTTATAATAAAA---------AGTAAACCATA-----TTAATTTTTTTAAAAAATAATAGC----ATGTAAGTTATAACATATA--AGAGGAATAATTGAG------------------------GCTTGTGTCCAGAACTTGAAATTTAAATTTAGGTCAATTC----Ca----cattctctgcgatcccactgcaggccagacactctgcta-gttcaggggatactgagatgaacaaaggtggtccctgccctgccacagCGGGCT s panTro5.chr3 2532995 217 - 202621043 TTTTATAATAAAA---------AGTAAACCATA-----TTAATTTTTTAAAAAAATAATAGC----ATGTAAGTTATAACGTATA--AGAGGAATAACTGAG------------------------GCTTGTGTCCAGAACTTGAAATTTAAATttaggtcaattc----ca----cattctctgcgatcccaccgcaggccagacactctgcta-gttcaggggatactgagatgaacaaaggtggtccctgccctgccgcagcgggct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123152 215 - 190779 TTTTATAATAAAA---------AGTAAACCATA-----TTAATTTTT--AAAAAATAATAGC----ATGTAAGTTATAACATATA--AGAGGAATAACTGAG------------------------GCTTGTGTCCAGAACTTGAAATTTAAATttaggtcaattc----ca----cattctctgcgatcccaccgcaggccagacactctgcta-gttcaggggatactgagatgaacaaaggtggtccctgccctgccgcagcgggct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 74099 216 - 106623 TTTTATAATAAAA---------AGTAAACCATA-----TTAATTTTTTTAAAAAATAATAGC----ATGTAAGTTATAACATACA--AGAGGAATAATT-AG------------------------GCTTGTGTCCAGAACTTGAAATTTAAATTTAGGCCAATTC----Ca----cattctctgcgatcccaccgcaggccagacactctgcta-gttcaggggatactgagatgaacaaaggtggtccctgccctgccgcagcgggct i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2849808 217 - 123690457 TTTTATAATAAAA---------AGTAAACCATA-----TTAATTTTTTAAAAAAATAATAGC----ATGTAAGTTATAACATATA--AGAGGAATAATTGAG------------------------GCTTGTGTCCAGAACTTGAAATTTAAATTTAGGTCAATTC----Ca----cattctctgcaatcccaccgcaggccagacgctctgcta-gttcaggggatattgagatgaacaaaggtggttcctgccctgccacagtgcatt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2346401 214 - 204787373 --TTATAATAAAA---------AGTAAACCATA-----TTAATTTTTt-aaaaaataatagc----atgtaagttataacatata--agaataaTAATTGAG------------------------GCTTGTGTCCAGAACTTGAAATTTAAATTTAGGTCAATTC----Ca----cattctctgtgatcccaccgcaggccagacgctctgcta-gttcaggagatactgagatgaacaaaggtggcccctgccctgccacagcgccct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192411566 216 - 192460366 TTTTATAATAAAA---------AGTAAACCATA-----TTAATTTTTT-AAAAAATAATAGC----ATGTAAGTTATAACATATA--AGAAGAATAATTGAG------------------------GCTTGTGTCCAGAACTTGAAATTTAAATTTAGGTCAATTC----Ca----cattctctgtgatcccaccgcaggccagacgctctgcta-gttcaggagatactgagatgaacaaaggtggcccctgccctgccatagcgccct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19150838 216 - 19675229 TTTTATAATAAAA---------AGTAAACCATA-----TTAATTTTTT-AAAAAATAATAGC----ATGTAAGTTATAACATATA--AGAAGAATAATTGAG------------------------GCTTGTGTCCAGAACTTGAAATTTAAATttaggtcaattc----ca----cattctctgtgatcccactgcaggccagacgctctgcta-gttcaggagatactgagatgaacaaaggtggcccctgccctgccatagcgcact i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16387879 211 - 16847902 TTTTCTAATAAA-------------AAACCATA-----TTAATTTTTT--AAAAATAATAGC----ATGTAAGTTATAACATATA--AGAAGAATAATTGAG------------------------GCTTGTGTCCAGAACTTGACATTTAAATTTAGGTCGATTC----Ca----cattctctgtgatcccaccacaggccagacgctctgcta-gttcaggggatactgagatgaacaaaggtggcccctgccctgccgtagcgccct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91357809 211 + 91754291 TTTTCTAATAAA-------------AAACCATA-----TTAATTTTTT--AAAAATAATAGC----ATGTAAGTTATAACATATA--AGAAGAATAATTGAG------------------------GCTTGTGTCCAGAACTTGAAATTTAAATTTAGGTCAATTC----Ca----cattctctgtgatcccactgcaggccagacgctctgccg-gttcaggggatactgagatgaacaaaggtggcccctgccctgccgtagcgcact i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1424087 211 + 1977891 TTTTCTAATAAA-------------AAACCATA-----TTAATTTTTT--AAAAATAATAGC----ATGTAAGTTATAACATATA--AGAAGAATAATTGAG------------------------GCTTGTGTCCAGAACTTGACATTTAAATTTAGGTCGATTC----Ca----cattctctgtgatcccaccgcaggccagacgctctgcta-gttcaggggatactgagatgaacaaaggtggcccctgccctgccatagcgcact i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7363658 211 - 7796314 TTTTAAAATAAA-------------AAACCAT------TTAATTTTTA-AAAAAATAATAGC----ATGTAAGTTATAACATATA--AGAAGAATAATTGAG------------------------GCTTGCGTCCAGAACTTGAAATTTAAATTTAGGTCCATTC----Ca----cattctctgcgatcccaccgcaggccagacgctctgcta-gttcgggggatactgagatggacaaaggtggcccgtgccctgccgtagcgcact i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73838088 233 + 74750902 TTTTATAATAAAA---------AGTAAACCACA-----TTTAATTTT--AAAACATAGTAAC----ACGTACGTTATAAGACATG--AGAGGAATAATCAAGTATCGCAGACTTTCTTTTGAATCTGCTTGTGTCCAGAACTTG------AAATTCAGGTCAATTC----CA----CAGTCTCTGCGTCCTTACCACAGGCTCGATGCCCTGCCA-GCTCAAGGGATACTGAGGTGAACAGAGGTGGCCTCTGCCCTGCTGTCACTCACT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284588 233 - 17725628 TTTTATAATAAAA---------AGTAAAACACA-----TTTAATTTT--AAAACATAATAAC----ATGTAAGTTATAAGACATG--CGAGGAATAATTGAGTATTGTAGACTTTCTTTTAAATCTGCTTGTGTCCAGAACTTG------AAATTCAGGTCAATTC----CA----CATTCTCTGCATCCTCACCACAGCCTCGATGCCCTGCTA-GCTCAGGGGACACTGAGATGAACAGAGGTGGCCTCTGCCCTCCTGTCACTCACC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6373984 232 + 6778120 TTTTATAATAAAA---------AGTAAACCACA-----TTTAATTTT--AAAACATAATAAT----ATGTA-GTTATAAGATATG--AGAGGAATAATCAAGTATTGCAGACTTTCTTTTAAATCTGCCTGTGTCCAGAACTTG------AAATTCTGGTCAATTC----Ca----cattctctgcgtccttaccacaggctcaatgccctgcta-gctcaggggacactgagatgaacagaggtggcctctgccctgctgtcgctcacg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 12310 233 + 69927 TTTTATAATAAAA---------AGTAAACCACA-----TTTAATTTT--AAAACATAACAAC----ATGTAAGTTATAAGATATG--AGAGGAATAATCAAATATTGCGGACTTTCTTTTCAATCTGCTTGTGTCCAGACCTTG------AAATTCAGGTCAATTC----CA----CATTCTCTGCGTCCTTACCACAGGCTCGATGCCCTGCTA-GCTCAGGGGATACTGAGATGAACAGAGGTGGCCTCGGCCCTGCTGTCGCTCACT i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 206198 235 + 608964 TTTTACAATAGAA---------AAAAACCAACAAAGCCTTGTTTAATTAAAACAATAATAAC----AGGTGAGTTAAGAGTTAAG--GAAGGAATCATTGAGAATGGCAGAGTTTCTTTGAAATCTGCTTACATCCAGAGCGTG------AAATGCAAGTCAattcaacaaa----cattctgtgtgatccaacctcag-ccacgtgctcggtag-gctctgaggatacgga---gaacacggg-----cctgcctggaaggagctcaGT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2321027 238 - 31377067 -TTTAAAATataa---------taataataata-----ataataataa-taataataataataataaCTCGACTTACGAGCTAGAGGAGAGGAATAATTGAGTACTGCAGACTTTCCTGTGATCT-GCTTATGTCCAGAACTTG------AAattcaagtcaatcc----aacaggcattctctgtgatcctaccacaggccaggcgctctgctaggttcaaaggatactgaga-----aaatatggtccctgctctgaaggagctcaaa i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2700510 225 - 6579706 ttttacagtaggaaaaaaaaCCAATAAACCATG-----TTTCATTTTA-ATGAAACAGTAAC----GTGAGAGCTGTAAACTGTG--GGAGGAAGGGTTGAGTACTGTAGGCTTTCTTTTAAATCTGCTTGTGGCCAGATTTTG------AAATTCAAGTCAATTC----CA----C-------------------CAGgctgggcaccctgctgggttcaggggatcctaagacgaagaagtctggttgctgccctgaaggagctcaca i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e mm10.chr16 32784906 961 + 98207768 I e micMur3.chr1 88385260 2729 + 114275543 I a score=856023.000000 s hg38.chr3_KI270934v1_alt 61034 75 + 163458 GTTCGACAGGCTCC-A-GGCCCGTTTCAGTAAATGCTATCATCAAAGTCCAAACCAAGACCTGGGGGAGT---AGAAGGA- s panTro5.chr3 2533212 75 - 202621043 gttcaacaggCTCC-A-GGCCCGTCTCAGTAAATGCTATCATCAAAGTCCAAACCAAGACCTGGGGGAGT---AGAAGGA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123367 75 - 190779 gttcaacaggctcc-a-ggcccgtctcagtaaatgctatcatcaaagtccaaaccaagacctgggggagt---aggagga- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 74315 78 - 106623 gttcaacaggCTCC-A-GGCCCGTCTCAGTAAATGCTATCATCAAAGTCCAAACCAAGACCTgggggagtaggaggagga- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2850025 75 - 123690457 gttcaacaggCTCC-A-GGCCCATCCCAGTAAATGCTATCATCAAAGTCCTAACCAAGACCTGGGGGAGT---AGGAGGA- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2346615 75 - 204787373 gttcaacaggctcc-a-ggcccgtctcagtaaatgctatcatcaaagtgcaaaccaagacctgggggagt---ggaagga- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192411782 75 - 192460366 gttcaacaggctcc-a-ggcccgtctcagtaaatgctatcatcaaagtgcaaaccaagacctgggggagt---ggaagga- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19151054 75 - 19675229 gttcaacaggctcc-a-ggcccgtctcagtaaatgctatcatcaaagtgcaaaccaagacctgggggagt---ggaagga- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16388090 75 - 16847902 gttcaacaggctcc-a-ggcccgtctcagtaaatgctatcatcaaagtgcaaaccaagacctgggggagt---ggaagga- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91358020 75 + 91754291 gttcaacaggctcc-a-ggcccgtctcagtaaatgctatcatcaaagtgcaaaccaagacctgggggagt---ggaagga- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1424298 75 + 1977891 gttcaacaggctcc-a-ggccggtctcagtaaatgctatcatcaaagtgcaaaccaagacctgggggagt---ggaagga- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7363869 75 - 7796314 gtccaacaggCTCC-A-GGCCCGTCTCAGTAAATGCTCTCATCAAAGTGCAAACCCAGACCTGGGGGAGT---GGAAGGA- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73838321 74 + 74750902 GTTCCACTGGCTCC-A-GGCCAGTCTCACTAAATGCT-TAATCAAAGTCCAAAGCAAGACCTGGGGCATT---GGAAGGA- i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 17284821 74 - 17725628 ATCCCACCGGCTGC-A-GGCCAGTCTCAGTAAATGCT-TAATCAAAGTCCAGAGCAAGACCTGGGGCAGT---GGACGGA- i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 6374216 74 + 6778120 gctccaccggctgc-a-ggccagtctcagtaaatgct-taatcaaagtccaaagcaagacctggggcagt---ggacgga- i cebCap1.NW_016107444v1 C 0 I 1 s aotNan1.NW_018503669v1 12543 74 + 69927 GTTCCACCGGCTCC-A-GGCCAGTCTCAGTAAATGCT-TAATCGAAGTGCAAAGCGAGACCCGGGGCAGT---GGAAGGA- i aotNan1.NW_018503669v1 C 0 I 41 s otoGar3.GL873829 206433 76 + 608964 GTTCAACACGCTCTGA-GGCCGGCCTCAGTGGGGGCCATCACCAAGGTCCAAACCAAGAACAGGGGAGTG---AGAAGGA- i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32785867 48 + 98207768 GTTCAACAGGCTCC-AGGGCAAGTCTTGGTAA-----------AAATGTCAAACCAAATC--------------------- i mm10.chr16 I 961 C 0 s canFam3.chr33 2321265 76 - 31377067 gttcaacagactcc-agggccagcctccgtaagtgccataatcaaggtccaaaccaagaaccaggggaga---atgagga- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2700735 77 - 6579706 gttcaacaggCCCC-AAGGCCAACCTCAGTCAGTGCTGTAATCAAGGTCCAAACCAAAACTGGGAGAGCA---TGAAGTAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e micMur3.chr1 88385260 2729 + 114275543 I a score=351873.000000 s hg38.chr3_KI270934v1_alt 61109 43 + 163458 GGAGGTAGCAGTGAGACTATACAC--AATCCCTGTACTATAAAAA s panTro5.chr3 2533287 43 - 202621043 GGAGGTAGCAGTGAGACTACACAC--AATCCCTGTACTATAAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123442 43 - 190779 ggAGGTAGCAGTGAGACTGCACAC--AATCCCTGTACTATAAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 74393 43 - 106623 ggaggtagcagtgagACTATACAC--AATCCCTGTACTATAAAAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2850100 42 - 123690457 GGAGGTAGCAGTGAGACTATACAC---ATCCCTGTACTGTAAAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2346690 42 - 204787373 ggaggT-GCAGTGAGAATATCCAC--AATCCCTCTACCGTAAAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192411857 42 - 192460366 ggaggT-GCAGTGAGAATATCCAC--AATCCCTCTACCGTAAAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19151129 42 - 19675229 ggAGGT-GCAGTGAGAATATCCAC--AATCCCTCTACCGTAAAAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16388165 42 - 16847902 ggAGGT-GCAGTGAGAATATCCAC--AATCCCTCTACCGTAAAAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91358095 42 + 91754291 ggAGGT-GCAGTGAGAATATCCAC--AATCCCTCTACCGTAAAAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1424373 42 + 1977891 ggAGGT-GCAGTGAGAATATCCAC--AATCCCTCTACCGTAAAAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7363944 42 - 7796314 GGAGGT-GCAGTGAGAATATCCAC--AATCCCTCTCCCGTGAAAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73838396 43 + 74750902 GGAGGGAGCCATGAGCACATTCAC--AACCCCTAGACTGTAAAGA i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17284896 43 - 17725628 GGAGGGAGCCGTGGGCACATACAC--GGCCCCTAGACTGCAAAGA i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 6374291 42 + 6778120 ggagggagccGTGAGCACATACAC--AGCCCCTAGACTGCAAA-A i cebCap1.NW_016107444v1 I 1 C 0 s otoGar3.GL873829 206510 38 + 608964 GGTGGTAGCCTTGTGGATACACAA--AATCCCT-----ATAGAAA i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32785915 42 + 98207768 --AGGCAACAG-GAAATCACTCCCCAAATTCCCACGTAGTAAAAA i mm10.chr16 C 0 C 0 s canFam3.chr33 2321342 43 - 31377067 ggcGGTTGTAGGGAGGATGCACAA--AATCCCTGTATCATAAAAA i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2700812 43 - 6579706 GGAGGTAGCAGTGAGGATGCACAA--AATCCCTATATCGTAAAAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e aotNan1.NW_018503669v1 12617 41 + 69927 I e micMur3.chr1 88385260 2729 + 114275543 I a score=197566.000000 s hg38.chr3_KI270934v1_alt 61152 22 + 163458 TGGCGAAAG-----------------C---ATGC-AGATCAAT- s panTro5.chr3 2533330 22 - 202621043 TGGCGAAAG-----------------C---ATGC-AGATCAAT- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123485 22 - 190779 TGGCGAAAG-----------------C---ATGC-AGATCAAT- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 74436 22 - 106623 CGGCGAAAG-----------------C---ATGC-AGATCAAT- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2850142 22 - 123690457 TGGCGAAAG-----------------C---ATGC-AGATCAGT- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2346732 22 - 204787373 CGGCGAAAG-----------------C---ATAC-AGATCAAC- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192411899 22 - 192460366 CGGCGAAAG-----------------C---ATAC-AGATCAAT- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19151171 22 - 19675229 CGGCGAAAG-----------------C---ATAC-AGATCAAT- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16388207 22 - 16847902 CGGCGAAAG-----------------C---ATAC-AGATCAAT- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91358137 22 + 91754291 CGGCGAAAG-----------------C---ATAC-AGATCAAT- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1424415 22 + 1977891 CGGCGAAAG-----------------C---ATAC-AGATCAAT- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7363986 22 - 7796314 CGGCGAAAG-----------------C---ATAC-AGATCAAC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73838439 22 + 74750902 TGGCGAGAG-----------------C---ACAC-AAGTCAAC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284939 22 - 17725628 CGGCGAGAG-----------------C---ACAC-AGCTCAAC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6374333 22 + 6778120 TGGTGAGAG-----------------C---ACAC-AGCTCAAT- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 12658 22 + 69927 TGGCAAGAG-----------------C---GTAC-AGGTCAGT- i aotNan1.NW_018503669v1 I 41 C 0 s otoGar3.GL873829 206548 25 + 608964 TGTTGAAAG-----------------CATAATAC-AGGTAAAT- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32785957 23 + 98207768 CATCTAAGG-----------------C---ACCTGGGATCCCT- i mm10.chr16 C 0 I 2 s canFam3.chr33 2321385 39 - 31377067 CGTAAAAAAACCTTAACCAAACAACCT---ATAT-GGCTCAAA- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2700855 24 - 6579706 TGTCAAAAAA----------------T---ATAC-AGGTCAAAT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e micMur3.chr1 88385260 2729 + 114275543 I a score=339427.000000 s hg38.chr3_KI270934v1_alt 61174 24 + 163458 AGACAGCCTCTG-GGCCACACTGAG s panTro5.chr3 2533352 24 - 202621043 AGACAGCCTCTG-GGCCACACTGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123507 24 - 190779 AGACAGCCTCTG-GGCCACACTGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 74458 24 - 106623 AGACAGCCTCTG-GGCCACACTGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2850164 20 - 123690457 ----AGCCTCTG-GGCCACACCGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2346754 24 - 204787373 AGACAACCTCTG-GACCACGCTGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192411921 24 - 192460366 AGACAACCTCTG-GACCACGCTGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19151193 24 - 19675229 AGACAACCTCTG-GACCACGCTGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16388229 24 - 16847902 AGACAACCTCTG-GACCACGCTGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91358159 24 + 91754291 AGACAACCTCTG-GACCACGCTGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1424437 24 + 1977891 AGACAACCTCTG-GACCACGCTGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7364008 24 - 7796314 AGACAGCCTCTG-GACCACACCGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73838461 21 + 74750902 GGACAG---CTG-GGTCATACTGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284961 24 - 17725628 AGACAGCCTCTG-GGCCATACTGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6374355 24 + 6778120 AGACAGCCTCTG-GGCCATACTGAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 12680 23 + 69927 AGACAGCC-CTG-GGCCACGCCAAG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88387989 24 + 114275543 AGACAGCCTCTG-GGCCACACTGAG i micMur3.chr1 I 2729 I 8 s otoGar3.GL873829 206573 24 + 608964 AGACACCCTGTG-GGCCACACTGAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32785982 25 + 98207768 AGATAATCTCTGAGGTTATACTGAG i mm10.chr16 I 2 I 6 s canFam3.chr33 2321425 24 - 31377067 AGATAACCTCTG-GGCCACACCGTG i canFam3.chr33 I 1 I 1 s dasNov3.JH569502 2700879 24 - 6579706 AGAAAACCTCTT-GGCCACACTGAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I a score=65324.000000 s hg38.chr3_KI270934v1_alt 61198 9 + 163458 -TGAATTTTA s panTro5.chr3 2533376 9 - 202621043 -TGAATTTTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123531 9 - 190779 -TGAATTTTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 74482 9 - 106623 -TGAATTTTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2850184 9 - 123690457 -TGAATTTTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2346778 9 - 204787373 -TGAGTTTTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192411945 9 - 192460366 -TGAATTTTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19151217 9 - 19675229 -TGAATTTTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16388253 9 - 16847902 -TGAGTTTTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91358183 9 + 91754291 -TGAATTTTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1424461 9 + 1977891 -TGAGTTTTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7364032 9 - 7796314 -TGAGTTTTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73838482 9 + 74750902 -TGAAGGTTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284985 9 - 17725628 -TGAAGTTTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6374379 9 + 6778120 -TGAAGTTTA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 12703 9 + 69927 -TGACGTTTA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 206597 1 + 608964 --G------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32786013 3 + 98207768 -TGA------ i mm10.chr16 I 6 C 0 s canFam3.chr33 2321450 9 - 31377067 -AGAATTCTA i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2700903 10 - 6579706 AATAATTTTA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14793300 618 - 22200726 I e micMur3.chr1 88388013 8 + 114275543 I a score=76882.000000 s hg38.chr3_KI270934v1_alt 61207 8 + 163458 ATGCAGGA s panTro5.chr3 2533385 8 - 202621043 ATGCAGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123540 8 - 190779 ATGCAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 74491 8 - 106623 ATGCAGGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2850193 8 - 123690457 ATGCAGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2346787 8 - 204787373 ATGCAGGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192411954 8 - 192460366 ATGCAGGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19151226 8 - 19675229 ATGCAGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16388262 8 - 16847902 ATGCAGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91358192 8 + 91754291 ATGCAGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1424470 8 + 1977891 ATGCAGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7364041 8 - 7796314 ATGCAGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73838491 5 + 74750902 AGGCA--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284994 3 - 17725628 AGT----- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6374388 8 + 6778120 AGGCAGGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 12712 8 + 69927 AGGCAGGA i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14793918 8 - 22200726 ATGCAAGG i proCoq1.NW_012133858v1 I 618 C 0 s otoGar3.GL873829 206598 8 + 608964 ATGCAAGG i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32786016 8 + 98207768 GTACAAAA i mm10.chr16 C 0 C 0 s canFam3.chr33 2321459 8 - 31377067 ATGTCCGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2700913 8 - 6579706 ATACAGGA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88388013 8 + 114275543 I a score=1638246.000000 s hg38.chr3_KI270934v1_alt 61215 115 + 163458 TGGAAGCAC----------ACAGATG------GGTGATCAGGTCTCTCTTTACTGAAACACAGAACATGTGCCAAGGTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG---CCCCTCCCC--ATACATACACTC-- s panTro5.chr3 2533393 115 - 202621043 TGGAAGCAC----------ACAGATG------GGTGATCAGGTCTCTCTTTACTGAAACACAGAACATGTGCCAAGGTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG---CCCCTCCCC--ACACATACACTC-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123548 115 - 190779 TGGAAGCAC----------ACAGATG------GGTGATCAGGTCTCTCTTTACTGAAACACAGAACATGTGCCAAGGTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG---CCCCTCCCC--ACACACACACTC-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 74499 115 - 106623 TGGAAGCAC----------ACAGATG------GGTGATCAGGTCTCTCTTTACTGAAACACAGAACATGTGCCAAGGTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG---CCCCTTCCC--ACACATACGCTC-- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2850201 115 - 123690457 CGGAAGCAC----------ACAGATG------GGTGAGCAGGTCTCTCTTTACTGAAACACAGAATATGTGCCAAGGTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG---CCCCTCCCC--ACACATATACTC-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2346795 113 - 204787373 TGGAAGCAC----------ACAGATG------GCTGATCAGGTCTCTCTTTACTGAA--ACAGAACATGTGCCAAGGTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG---CCCCTCCCC--GCATATATGCTC-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192411962 113 - 192460366 TGGAAGCAC----------ACAGATG------GCTGATCAGGTCTCTCTTTACTGAA--ACAGAACATGTGCCAAGGTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG---CCCCTCCCC--ACATATATGCTC-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19151234 113 - 19675229 TGGAAGCAC----------GCAGATG------GCTGATCAGGTCTCTCTTTACTGAA--ACAGAACATGTGCCAAGGTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG---CCCCTCCCC--GCATATATGCTC-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16388270 113 - 16847902 TGGAAGCAC----------ACAGATG------GCTGATCAGGTCTCTCTTTACTGAA--ACAGAACATGTGCCAAGGTGAGTCCAAGGACCCCTCAGGGAACAGGTGAAG---CCCCTCCCC--GCATACACGCTC-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91358200 113 + 91754291 TGGAAGCAC----------ACAGATG------GCTGATCAGGTCTCTCTTTACTGAA--ACAGAACATGTGCCAAGGTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG---CCCCTCCCT--GCATATATGCTC-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1424478 113 + 1977891 TGGAAGCAC----------ACAGATG------GCTGATCAGGTCTCTCTTTACTGAA--ACAGAACATGTGCCAAGGTGAGTCCAAGGACCCCTCTGGGAACAGGTGAAG---CCCCTCCCC--GCATATATGCTC-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7364049 115 - 7796314 GGGAAGCAC----------ACAGATG------GCTGATCAGCTCTCTCTTCACTGAAACACAGAACATGTGCCAAGGTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG---TCCCTCCCC--ACATATATGCTC-- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73838496 116 + 74750902 -GGAAGCAC----------GCAGATG------GGTGATCAGGTCTCTCTTTACTGAAACACAGAACATGTGCCAAGGTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG-CCCCCCTCCCC--ACACATATACTC-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17284997 94 - 17725628 -GGAAGCA------------CAGGTG------GGTGATCAGGTCTCTCTTTACTGAAACACAGAACATGTTC-------------------CCTCTGGGAACAGGTGAAG--CCCCCTCCCC--ACACATATACTC-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6374396 117 + 6778120 TGGAAGCAC----------ACAGATG------GGTGATCAGGTCTCTCTTTACTGAAACACAGAACATGTGCCAAGGTGAGTCCAAGGACACCTGTGGGAACAGGCGAAG-CCCCCCTCCCG--ACACATGTACTC-- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 12720 116 + 69927 TGGAAGCAC----------ACAGATG------GGTGATCAGGTCTCTCTTTACTGAAACACAGAACATGTGCCAAGGTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG--CCCCCTCCCC--ACACATACACTC-- i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88388021 113 + 114275543 TGGAAACAC----------ACAGGTG------GGTGGTCAGGTCTCTCTTTACTGAAACACAGCACATGTGCCAAGG-AAGT-CAAGGACATGTCTGGGAACAGAGGAAG---CCCCCTCCC--Ccacacacacac-- i micMur3.chr1 I 8 I 18 s proCoq1.NW_012133858v1 14793926 109 - 22200726 TGGAAACAC----------ACAGGTG------GGTGGTCAGGTCTCTTTTTACTGAAACACAGCATGTGTGCCAAGG-AAGTCCAAGGACATGTCTGGGAACAGGAGAAG---C-----CCC--CCACCCACATAC-- i proCoq1.NW_012133858v1 C 0 I 8 s otoGar3.GL873829 206607 114 + 608964 TGGGAGCAC----------ACAGATG------GGTGGTTGGGGCTGTCTTTACTGAAAGACAGCCCATGTGTCAAGG-AAGTCCAAGGACATTTTTGGGAACAGGGGAAG---ACCCCCTCC--TCACACACACTC-- i otoGar3.GL873829 I 1 I 4 s mm10.chr16 32786024 114 + 98207768 CAGAAGAGC----------ACAGGTG------AGTGATCAGGTCTCCCTTTACCGAAATACAATAACCAGGCAGAGG--ATGTGAGGGACATCTCTGAAAAGAGGT-CAG---CCCCTCCCCTTGCACATACACTC-- i mm10.chr16 C 0 C 0 s canFam3.chr33 2321467 122 - 31377067 GAGAAGCAC----------AACGAGGGTGACAGGTGATCAGATCACTCTTTACTGCAACATGACACATGTGCCAGAGGGAGTCCAAGGGCATCTTTG-GAACAAGGGAAGCCCCCCCACCCA--ACACACACACC--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2700921 114 - 6579706 CGGGAGCACACAGCAGATGACAGATG------GGTGATCAGGTCCTCCTTTAC-----------AAATGGGCCAAGAGAAGTCCAAGGACACCTCTGGGAGCAGGGG--G---CCCATGCTC--ACACACACACACTC i dasNov3.JH569502 C 0 C 0 a score=40867.000000 s hg38.chr3_KI270934v1_alt 61330 6 + 163458 CGGTGG s panTro5.chr3 2533508 6 - 202621043 CGGTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123663 6 - 190779 CGGTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 74614 6 - 106623 CGGTGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2850316 6 - 123690457 TGGTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2346908 6 - 204787373 CGGTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192412075 6 - 192460366 CGGTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19151347 6 - 19675229 CGGTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16388383 6 - 16847902 CGGTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91358313 6 + 91754291 CGGTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1424591 6 + 1977891 CGGTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7364164 6 - 7796314 CGGTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73838612 6 + 74750902 CACTAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17285091 6 - 17725628 CAGTAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6374513 6 + 6778120 CAGTAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 12836 6 + 69927 CAGTAT i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14794043 6 - 22200726 AGGCAT i proCoq1.NW_012133858v1 I 8 C 0 s otoGar3.GL873829 206725 6 + 608964 AGGCAT i otoGar3.GL873829 I 4 C 0 s mm10.chr16 32786138 6 + 98207768 AGGCAT i mm10.chr16 C 0 C 0 s canFam3.chr33 2321589 6 - 31377067 TGGCAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2701035 6 - 6579706 AGACAT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88388134 18 + 114275543 I a score=7590268.000000 s hg38.chr3_KI270934v1_alt 61336 561 + 163458 ATGTGAGCGAGGGTCCTGTTGCCACATCTGGGGTTAGGGGCTTGGACATGCTGCCCTTC-----ATGGGAACCTTCTGGGTACCTCTCAGCACAGTAACGCAGCTGCAGTCTGTCGGTGG-----GGG-CCCAGGCTAGGGGCAGCA----C--C-CTCTTTTGGCATACGGGACATGCCTGGCTGCAGCTGATGTCCGTTAGCCTCTCCTGACACGCAGTAAGGAGACCTGGAAGTGAGGCGCGTGGGCGTGGAGTTCCCGGTGGAGCTGGAGAGCA-AAAGAGCCAGCT-GTCCTTTCAGCCC--ATCTGGCCCATGAGCTCGCCAGAGGCAGAGGAC-AGGAAGGGACACTGG----GGCAGAGTGCATGCGGAGGACG-----------------------------------------------------------------------------------GCAACCCTTCCTGGgcctcctac-atgctggacacaggct-ggtgcctcacacacattatgtcatctaaacctcacagcaaccttataaagcaggtgttaggatcctcattttataagggatgaaagtcgcatagaataacttatccaagatcacacagttggg------aactagaattcacacccagatctagctggttcctaagctcattg---- s panTro5.chr3 2533514 560 - 202621043 ATGTGAGCGAGGGTCCTGTTGCCACATCTGGGGTCAGGGGCTTGGACCTGCTGCCCTTC-----ATGGGAACCTTCTGGGTACCTCTCAGCACAGTAACGCAGCTGCAGTCTGTCGGTGG-----GGG-CCCAGGCTAGGGGCAGCA----C--C-CTCTTTTGGCATACGGGACATGCCTGGCTGCAGCTGATGTCCATTAGCCTCTCCTGACACGCAGTAAGGAGACCTGGAAGTGAGGCGCGTGGGCGTGGAGTTCCCGGTGGAGCTGGAGAGCA-AGAGAGTCAGCT-GTCCTTTCAGCCC--ATCTGGCCCATGAGCTCGCCAGAGGCAGAGGAC-AGGAAGGGACACTGG----GGCAGAGTGCATGCGGAGGACG-----------------------------------------------------------------------------------GCAACCCTTCCTGg-cctcctac-atgctggacacaggct-ggtgcctcacacacattatgtcatctaaacctcacagcaaccttataaagcaggtgttacgatcctcattttataagggatgaaagtcgcatagaataacttatccaagatcacacagttggg------aactagaattcacacccagatctagctggttcctaagctcattg---- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123669 560 - 190779 ATGTGAGCGAGGGTCCTGTTGCCACATCTGGGGTCAGGGGCTTGGACCTGCTGCCCTTC-----ATGGGAACCTTCTGGGTACCTCTCAGCACAGTAACGCAGCTGCAGTCTGTCGGTGG-----GGG-CCCAGGCTAGGGGCAGCA----C--C-CTCTTTTGGCATACGGGACATGCCTGGCTGCAGCTGATGTCCGTTAGCCTCTCCTGACACGCAGTAAGGAGACCTGGAAGTGAGGCGCGTGGGCGTGGAGTTCCCGGTGGAGCTGGAGAGCA-AGAGAGCCAGCT-GTCCTTTCAGCCC--ATCTGGCCCATGAGCTCGCCAGAGGCAGAGGAC-AGGAAGGGACACTGG----GGCAGAGTGCATGCGGAGGACG-----------------------------------------------------------------------------------GCAACCCTTCCTGg-cctcctac-atgctggacacaggct-ggtgcctcacacacattatgtcatctaaacctcacagcaaccttataaagcaggtgttacgatcctcattttataagggatgaaagtcgcatagaataacttatccaagatcacacagttggg------aactagaattcacacccagatctagctggttcctaagctcattg---- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 74620 562 - 106623 ATGTGAGCGAGGGTCCTGTTGCCACATCTGGGGTCAGGGGCTTGGACCTGCTGCCCTTC-----ATGGGAACCTTCTGGGTACCTCTCAGCACAGTAACACAGCTGCAGTCTGTCGGTGG-----AGG-CCCGGGCTAGGGGCAGCA----C--C-CTCTTTTGGCACACGGCACATGCCTGGCTGCAGCTGATGTCCGTTAGCCTCTCCTGACACGCAGTAAGGAGACCTGGAAGTGAGGCGCGTGGGCGTGGAGTTCCCGGTGGAGCTGGAGAGCA-AGAGAGCCAGCT-GTCCTTTCAGCCC--ATCTGGCCCATGAGCTCACCAGAGGCAGAGGAC-AGGAAGGGACACTGG----GGCAGAGTGCATGCGGAGGACG-----------------------------------------------------------------------------------GCAACCCTTCCTGGGCCTCCTACAAtgctggacacaggct-ggtgcctcacacacattatgtcatctaaacctcacagcaaccttataaagcaggtgttacgatcctcattttataagggatgaaagtctcatagaataacttatccaagatcacacagttggg------aactagaagtcacacccagatctagctggttcctaagctcattg---- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2850322 558 - 123690457 ACGGGAGCGAGGGTCCTGTTGCCACATCTGGGGTCAGGGGCTTGGACCTGCTGCCCTTC-----CTGGGAACCT--TGTGTACCTCTCAGCACCGTAACGCAGCTGCAGTCTGTCGGTGG-----GGG-CCCAGGCC-GGGGCAGCA----C--C-CTCTTTTGGTGTACAGGACATGCCTGGCTGCAGCTGATGTCCGTTAGCCTCTCCTGACGCGCAGTAAGGAGACCTGGAGGCGAGGCACGTGGGCATGGAGTTCCCGGCGGAGCTGGAGAGCA-AGGGAGCCAGCT-GTCCTTTCAGCCC--ATCTGGCCCATGAGCTCACCACAGGCAGAGGAC-AGGAAGGGACAGTGG----GACAGAGTGCATGCGGAGGACG-----------------------------------------------------------------------------------GCAACCCTTCCTGGgcctcctac-atgcccgacacaggct-ggtgcctcacacacattatgtcatctagacctcacagcaaccttgtaaagcaggtgttacgatcctcattttataagggatgaaagtcgcgtggaataacttatcgaagatcacacagttggg------aactagaattcacacccagatccagctggttccgaagctcattg---- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2346914 561 - 204787373 CCGTGAGCGA-GGTCCTGTTGCCACATCTGGGGTCAGGGGCTTGGACCGGCTGCCCTTC-----ACAGGAAACTTCTTGGTACCTCTCAGCACAGTAATGCATCTGCAGTCTGTTGGTGG-----GGG-CCCAGGCCATGGGCAGCA----C--C-TTCTTTTGGCATACAGGACAGGCCTGGCTGCAGCTGATGTCTGTTAGCCTCTCCTGATGCGCAGTAAGGAGACCTGGAAGTGAGGCGCGTGGGCGTGGAGTTCCTGGCGGAGCTGGAGAACA-AGGGAGCCAGGTGGTCCTTTCAGCCC--CTCTGACCCATGAGCTCGCCATAGGCAGAGGAC-AGGAAGGGACAGTGG----GGCAGAGTGCATGTGATGGACG-----------------------------------------------------------------------------------gcaacccttcctggaccccttac-atgccggacacaggct-ggtgcttcccacacattatgtcatctaaacctcacagaaaccttataaagcaggtgttatgatcctcattttataagggatcaaagtcgcatagaataacttatccaagaccacacagttggg------aactagaattcacacccagatctagctggttccgacgctcattg---- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192412081 561 - 192460366 CCGTGAGCGA-GGTCCTGTTGCCACATCTGGGGTCAGGGGCTTGGACCGGCTGCCCTTC-----ACAGGAAACTTCTTGGTACCTCTCAGCACAGTAATGCAGCTGCAGTCTGTTGGTGG-----GGG-CCCAGGCCATGGGCAGCA----C--C-TTCTTTCGGCATACAGGACAGGCCTGGCTGCAGCTGATGTCTGTTAGCCTCTCCTGATGCGCAGTAAGGAGACCTGGAAGTGAGGCGCGTGGGCGTGGAGTTCCTGGCGGAGCTGGAGAACA-AGGGAGCCAGGTGGTCCTTTCAGCCC--CTCTGACCCATGAGCTCGCCATAGGCAGAGGAC-AGGAAGGGACAGTGG----GGCAGAGTGCATGTGATGGACa-----------------------------------------------------------------------------------gcaacccttcctggaccccttac-atgctggacacaggct-ggtgcttcacacacattatgtcatctaaacctcacagaaaccttttaaagcaggtgttatgatcctcattttataagggatcaaagtcgcatagaataacttatccaagaccacacagttggg------aactagaattcacacccagatctagctggttccgaagctcattg---- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19151353 561 - 19675229 CCGTGAGTGA-GGTCCTGTTGCCACATCTGGGGTCAGGGGCTTGGACCGGCTGCCCTTC-----ACAGGAAACTTCTTGGTACCTCTCAGCACAGTAATGCAGCTGCAGTCTGTTGGTGG-----GGG-CCCAGGCCATGGGCAGCA----C--C-TTCTTTTGGCATACGGGACATGCCTGGCTGCAGCTGATGTCTGTTAGCCTCTCCTGATGCGCAGTAAGGAGACCTGGAAGTGAGGCGCGTGGGCGTGGAGTTCCTGGCGGAGCTGGAGAACA-AGGGAGCCAGGTGGTCCTTTCAGCCC--CTCTGACCCATGAGCTCGCCATAGGCAGAGGAC-AGGAAGGGACAGTGG----GGCAGAATGCATGtgatggacg-----------------------------------------------------------------------------------gcaacccttcctggaccacttac-atgctggacacaggct-ggtgcttcccacacattatgtcatctaaacctcacagaaaccttataaagcaggtgttatgatcctcattttataagggatcaaagtcgcatagaataacttatccaagaccacacagttggg------aactagaattcacacccagatctagctggttccgaagctcattg---- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16388389 561 - 16847902 CCGTGAGCGA-GGTCCTGTTGCCACATCTGGGGTCAGGGGCTTGGACCGGCTGCCCTTC-----ACGGGAAACTTCTTGGTACCTCTCAGCACAGTAATGCAGCTGCAGTCTGTTGGTGG-----GGG-CCCAGGCCATGGGCAGCA----C--C-TTCTTTTGGCGTACAGGACAGGCCTGGCTGCAGCTGATGTCTGTTAGCCTCTCCTGATGCGCAGTAAGGAGACCTGGAAGTGAGGCGCGTGGGCGTGGAGTCGCTGGCGGAGCTGGAGAACA-AGGGAGCCAGGTGGTCCTTTCAGCCC--CTCTGACCCATGAGCTCGCCACAGGCAGAGGAC-AGGAAGGGACAGTGG----GGCAGAGTGCATGTGGAGGACG-----------------------------------------------------------------------------------GCAACCCTTCCTGGGCCCCTTAC-ATGCTGGACACAGGCT-GGTGCttcacacacattatgtcatctaaacctcacagaaaccttataaagcaggtgttatgatcctcattttataagggatcaaagtcgcatagaataacttatccaagaccacacagttggg------aactagaattcacacccagatctagctggttccgacgctcattg---- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91358319 561 + 91754291 CCGTGAGCGA-GGTCCTGTTGCCACATCTAGGGTCAGGGGCTTGGACCGGCTGCCCTTC-----ACAGGAAACTTCTGGGTACCTCTCAGCACAGTAATGCAGCTGCAGTCTGTGGGTGG-----GGG-CCCAGGCCATGGGCAGCA----C--C-TTCTTTTGGCGTACGGGACAGGCCTGGCTGCAGCCGATGTCTGTTAGCCTCTCCTGACGCGCAGCAAGGAGACCTGGAAGTGAGGCGCGTGGGCGTGGAGTCCCTGGCGGAGCTGGAGAACA-AGGGAGCCAGGTGGTCCTTTCAGCCC--CTCTGACCCATGAGCTCACCGTAGGCAGAGGAC-AGGAAGGGACAGTGG----GGCAGAGCGCATGTGGAGGACG-----------------------------------------------------------------------------------GCAACCCTTCCTGGGCCCcttac-gtgctggacacaggct-ggtgcttcacacacatgatgtcatctaaacctcacagaaaccttataaagcaggtgttacgatcctcattttataagggatcaaagtcgcagagaataacttatccaagaccacacagttggg------gactagaattcacgcccagatctagctggttccgaagctcattg---- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1424597 561 + 1977891 CCGTGAGCGA-GGTCCTGTTGCCACATCTAGGGTCAGGGGCTTGGACCGGCTGCCCTTC-----ACGGGAAACTTCTTGGTACCTCTCAGCACAGTAATGCAGCTGCAGTCTGTTGGTGG-----GGG-CCCAGGCCATGGGCAGCA----C--C-TTCTTTTGGCGTACGGGACAGGCCTGGCTGCAGCTGATGTCTGTTAGCCTCTCCTGATGCGCAGTAAGGAGACCTGGAAGTGAGGCGCGTGGGCGTGGAGTCGCTGGCGGAGCTGGAGAACA-AGGGAGCCAGGTGGTCCTTTCAGCCC--CTCTGACCCATGAGCTCGCCATAGGCAGAGGAC-AGGAAGGGACAGTGG----GGCAGAGTGCATGTGGTGGACG-----------------------------------------------------------------------------------GCAACCCTTCCTGGGCCCCTTAC-ATGCTGGACACAGGCT-GGTGCttcacacacattatgtcatctaaacctcacagaaaccttataaagcaggtgttatgatcctcattttataagggatcaaagtcgcatagaataacttatccaagaccacacagttggg------aactagaattcacacccagatctagctggttccgacgctcattg---- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7364170 559 - 7796314 CCGTGAGCGAGGGTCCTGTTGTCACATCTGGGGTCAGGGGCTTGGACCGGCTGCCCTTC-----ATGGGAAACTTCTGGGTACCTCTCAGCACAGTAACGCAGCTGCAGTCTGTTGGTGG-----GGG-CCCAGGCCATGGGCAGCA----T--C-TTCTTTTGGCATACGGGACATGCCTGGCTGCAGCTGATGTCTGTTAGCCTCTCCTGATGCGCAGTAAGGAGACCTGGAAGTGAGGCGCGTCGGCGTGGAGTCCCTGGCGGAGCTGGAGAACA-AGGGAGCCAGGTGGTCCTTTCAGCCT--ATCTGACCCAGGAGCTCGCCATAGGCAGAGGAC-AGGAAGGGACAGTGG----GGCAGAGCGCATGTGGAGGACG-----------------------------------------------------------------------------------GCAACCCTTCCTGGGCCTCTGAC-Atgctggacacaggct-ggtgcttcacacac---atgtcatctaaacctcacagaaaccttataaagcaggtgttatgatcctcattttataagggatgaaagtcgcatagaataacttatccaagatcacacagctggg------aactagaattcacacccagatctagctagttccgacgctcattg---- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73838618 559 + 74750902 ACGGGAGCTAGGGTCCTGTTACCACATCTGGGGTGAGGGGCTTGGGCCGGCTGCCCTTC-----ATGAGAAACTTCTGGGTGCCTCTCCACACAGCAATGCAGCTCCAGTCTGCTGGTAG-----GGG-CCCAGGCCGTGGGCAGCC----C--C-CTCTTTTGGCATATGAAACATGCCTGGTTGCAGCTGATGTCCGCTAGCCTCTCCTGATGCGCAGTAAGGAGACTTGGAGGAGAGGCACGTGGGCGTGGAGTTCGCGGCGGACCTGGAGAGCA-AGGGAGCCAGGCGGTCCTTTCAGACC--ATCT-GCCCGTGAGCTCACCACAGGCAGAGGAC-AGGAAGGGACAGT-G----GGCAGAGCGCGTGAGGAGGACG-----------------------------------------------------------------------------------GCAACCCTCCCCGGGCCTCCCAC-ACgctagactcaggctgggggcttcacacacg--atgtcatcaaaacttcacagcaaccttataaagcaggtgttatgaccctcatattgtaagggacgaaagtcgcaacgaatcactcatccaacgccacacagttagg------aactagaattcacacccaaatctggctggttccaaagtccattg---- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17285097 643 - 17725628 ACAGGAGCTAGGGTCCTGCTGCCACATCTCGGGTGAGGGGCTTGGGCCGGCTGCCCTTC-----ATGAGAAACTTCTGGGTACCTCTCCACACAGCAACGCAGCTCCAGTCTGCTGGTGG-----GGG-CCCAGGCCATGGGCAGCC----C--C-CTCTTTTGGTATATGCAACATGCCTGGTTGCAGCCGATGTCCGCTAGCCTCTCCTGACGCGCAGTAAGGAGACTTGGAGGAGAGGCATGTGGGCGTGGAGTTCACGGCGGACCTGGAGAGCA-AGGGAGCC-GGTGGTCCTTTCCGCCC--ATCTGGCCCGTGAGCTCACCACAGGCAGCGGAC-AGGAAGGGACAGTGG----GGCAGAGCGCATGAGGAGGACGGCAGGGTCCCAGCCCGCGTGTTCCCACCATCTCACCAGCAAGAGTGACCATGTCCCAGCCAGTGTGCTCCCACCATCTGACCAGCAACCCTTCCCGGgcctcccac-atgctagactccggccaggggcttcacacgcg--atgtcatctaaacttcacagcaaccgtacaaagcaggtgttacgatcctcacattgtaagggatgaaagtcacacgggatcactcatgcaggaccacacagttagg------aaccagaattcacacccagatctggctggttccaaagtccattg---- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6374519 554 + 6778120 ACGGGAGCTAGGGTCCTGTTGCCACATCTGGGGTGAGGGGCTTGGGCCAGCTGCCCTTC-----ATGAGAAACTTCTGGGTACCTCTCCACACAGCAACGCAGCTCCGGTCTGCTGGTGG-----GGG-CCCA-------GGCAGCC----C--C-CTCTTTTGGCATATGAAACATGCCTGGTTGCAGCTGATGTCCGCTAGCCTCTCCTGACGCGCAGCAAGGAGACTTGGAGGAGAGGCACGTGGGCGTGGAGTTCACGGCGGACCTGGACAGCA-AGGGAGCCAGGTGTTCCTTTCAGCCC--ATCTGGCCCGTGAGCTCACCACAGGCAGAGGAC-AGGAAGGGACAGTGG----GGCGGAGCACGTGAGGAGGACA-----------------------------------------------------------------------------------GCAACCCTTCCCGGgcctcccac-atgctagactctggccaggggcttcacacacg--atgtcatctaaacttcacggcaaccttataaagcaggtgttatgatcctcacattgtaagggatgcaagtcgcatggaatcactcatccaagaccacagagttagg------agccagaattcacacccagatctggctggttccaaagtccattg---- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 12842 561 + 69927 ACGGGAGCTGGGGTCCTGTTACCACATCTGGGGTGAGGGGTTTGGGCCGGCTGCCCTTC-----ATGAGAAACTTCTGGGCACCTCTCCACACAGCAGCGCAGCTCCGGTCTGCTGGCGG-----GGG-CCCAGGTCACGGGCACTC----C--C-CTCTTTTGGTGTATGAAACACGCCCGGTTGCAGCTGGTGTCCACTAGCCTCTCCTGACGCGCAGTAAGGAGACTTCGAGGAGAGGCACGTGGGCGTGGAGTTCTCGGCGGACCTGGAGAGCG-AGGGAGCCAGGCGGTCCTTTCAGCCC--ATCTGGCCTGTGAGCTCACCACAGGCAGAGGAC-AGGAAGGGACAGCGG----GGCAGAGCGCGTGAGGAGGACG-----------------------------------------------------------------------------------GCAACCCTTCCCGGGCCTCCCAC-ATGCTAGACTCAGGCTAGGGGCTTCACACACG--ATGtcatctaaacttcacagcaaccttgtaaagcaggtgttacgatcctcatattgtaagggatgaaagtcgcatggaatcactcatccaagaccacacggttaga------aactagaattcacacccagatctggctggttccacagttcatcg---- i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88388152 562 + 114275543 ACGTGAGCCAGGGTCCTGTTGCCACATCTGGGGTGGGGAGCTTGAGCCAGCTGCCCTTC-----GTGGGACTCTTCCAGGTACATCTCAGCACAGTAATGTGCTTCCAGTCTGTTGGTGG-----GGA-CCCAGGCCACAGGCACCTCTGTC--C-CTGTTTGGGCACATGGGACATGCCTGGCAGCAGCTGACATTCTCTAACCCCTCCTGGTGCGCAGTAGGGAGACTTGGATGAGAGGCAGGTGGGTATGCAGTTCACGGCGGAGCTGGAGATCAGAAGGAGCCAGGTGATAGTACTTGCCC--ATCT-GCCTGTGAGCTCGCCACAGGCCAAACAC-AGGAA-GGACAGTGG----GACAGAACACACGAGGaacaca-----------------------------------------------------------------------------------gcaacacttcctgagcctcccac-atgctgaacatcggctgggtgcttcacacacgttatatcatttaaaccctgcagcaaccttataaagcaga---tgttattctcattttatatgggatgaaagtaatatagaataactta-ccatggtcacacagttagg------aactagaattcatgccgagacctatcttgctccaaagctcattg---- i micMur3.chr1 I 18 I 58 s proCoq1.NW_012133858v1 14794049 566 - 22200726 ACGTGAACCAGGGTCCTGTTGCCACATCTGGGCTAGGGGGCTTGGGCCAGCTGACCTTC-----ATGGGACTCTTCCAGGTACATCTCAGCACAGTAATGCGGCTCCAGCCTGGTGGTGG-----GGG-CCCAGGCCACTGGCAGCACTGTC--C-CTGTTTTGGCACATGGGACATGCCTGGCAGCAGCTGATATTCTTTAGGCCCTCTTGGAGCGCAGTAGGGAGACTTGGATAGGAGGCAAGTGGGTATGCAGTTCACGGTGGAGCTGGAGAGCAGAAGGAGCCAGGTGGTACTTCTTGCCC--ATCT-GCCTGTGAGCTCGCCGCAGGCTGACGAC-AGGAA-GGACAGTGG----GACAGAGCACACGAGGAGGACA-----------------------------------------------------------------------------------GCAAcacttcctgagcctcctgc-atgctggacctgggctggatgcttcatacacattatatcatttaaaccctgcaccaaccttataaagtggatattattattctcattttgtatgcaatgaaagtaatatggaataacttacccacggtcaaacagttagc------aactataattcacacccagatctatcttgctccaaagctcatTG---- i proCoq1.NW_012133858v1 C 0 I 170 s otoGar3.GL873829 206731 475 + 608964 ATGTGAGCCAGGGTCCTGTCGCCACATCCTGGGTAGGGAGCTGAAGCCAGCTGCCCTTC-----ATAGGACTCTGCCAGGTACATCTCAGCACAGTAATGTGGCTCCAGCCTATTGGG-------------CAGGCC-CAGCCAGCACTGTC--C-CTCTTCCAGCATATGGGACATGCCTGGCAGCAGCTGATATTCTCTAGACCCTCCTGACGCGCAGTAAGGAGACTTGGATGGGAGGCAGGTGGGCATGCAGGTTACGTCGAAGCTGGAG---AGAGGGAGCCAGGTGGTATTT-----CC--AT------------------------------C-AGGAA-GGACAGTGGGACAGACAGAACATACGAGGAGGATA-----------------------------------------------------------------------------------GCAgcacttcctgagcct-ctac-atactg-------------------------------ccatttaaaccctgcagaaaccttatgaagcagatattctcattctcattctatatg----------------gaataactcacccgaggtc--acagttaga------aattagaattcacacccagatctatcttgctgcaaaTGTCATTA---- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32786144 486 + 98207768 AAGTGGACCAAGGTCTTGTGGTCAGGTATGGGGGAGGGCTCTCGAGCCAGCTGGCCTTC-----ATGAGAAACTTTGGAGTCCAT---AGCACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTTGGG-CCTCGGT----GGCATCA----C--CGTTCTTCTGGCACAGAGGCCATGCCTGGTTGCAGCTAGCATTCCTCAACCCCTCCTGATGCTCAGGAAGGACATGTGGACAAGTGGCATGCGGGCGTGCAGTTCACGGCGGAGCTGGAAAACA-AAATAA-CATGTGGGGTACCCAGCCT--ATCT-GCCTGGGAGCCCACCGTACGGCAAGGACGAGAAAGGGGCAGTGG----AG------------GGACATCC-----------------------------------------------------------------------------------ACAATGCTTCCTGGGCCACTTAA-A------------ACT----------------------------------------------cacagcaggtgctctgaacctcattctgtaggatgtaaaggtagtaaggactgaagtaatcaaacctacacagctaa----------tagaacccaacctcagatctgcctgactcctgggc-cattg---- i mm10.chr16 C 0 C 0 s canFam3.chr33 2321595 547 - 31377067 ATGTGGGCCAGGGTCCCGCTGCAGTGTCTGGGGCAAGG--CCTTAGGCAGCTGACCTTC-----G-GGGAAGCTTCCAGGTACAT-GCAGC-CTGTAGCGTAGCTCCAGTCGGGAAGTGG-----GGGTCCCAGGCCGCCGGCAGCG----CTGC-CCCTTTGGGCCCACAG-CCACCCCTGGCTGCGGCTGATGTGCCTCAGCCCCTCGTGACATGCAGCAGAGAGACCCGGGTGGGAGGCAGGTGGGCATGCAGTTCACGGCAGAGCTGGAGGGCA-AAAGGAGCAGAAGGTACTTCCAGCCCGAATGTGGCCCGTGAGCTCCCCACAGGCCGAGAAC-AGGACGAGACAGTGG----GAGCAAACGCACAGGGAGGCCA-----------------------------------------------------------------------------------GCAGCAGTCTCCGCGCCCC-----AGCCTGGGCCCGGACT--gtgcttcgcgcacattatgtcgtcca-acctcactgtaaccttaggaagcaggtgctgt-accttcgttttatagaggaagaaaataacatggaacaacctacccaagttcacagagtcagg------aagtggaattcacccccagatccatatggctccagag----------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2701041 564 - 6579706 ATGTG-GCCAGGGTCCCCCTGCCAAGTATGGGGTAAGGGGTCTGGGGCAGCCGATCGCCTGAAAGTAGGAAGTTTCCAGGCACATCCCAGCACAGTACCGTGGCTCAAGTCTGCAGGTGG-----GGT-CCCAGGCCGTAAGCAGCACTGCC--C-TCCTTCACGCCCATGGGTCACGTCTGGCTGCAGTCGACGTTCCTTAGCCCCTCCTGACGCGCAGCAGGGAGACTTGAACCGGAAGCATGTGGGCATGTAGTTCACGGCGAAGCTGGAAGGCAAAAGGAACCAGGGGCTACTTCCAGCTC--A-----------------CCACAGGCCAAGGAC-AGGAAGAGATGGTGG----GAGGGAAAGTATGAGGAAGGCA-----------------------------------------------------------------------------------GCAGcacttcctgagccttctgt-gggctgggcacggcatgggtgcttcatgcacattatgccacgta-gcctcacggcaaccttgtgaagccagtattatcaactccatcttataaaagaggaaaataatatgaagtaacttgcccgagttcccacagccagggtgagagactaaaattcaaagccagatctatttggcttcaaaactcACCATTTG i dasNov3.JH569502 C 0 C 0 a score=49457.000000 s hg38.chr3_KI270934v1_alt 61897 4 + 163458 tctA s panTro5.chr3 2534074 4 - 202621043 tctA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124229 4 - 190779 tctA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 75182 4 - 106623 tcta i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2850880 4 - 123690457 tctA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2347475 4 - 204787373 tcta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192412642 4 - 192460366 tcta i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19151914 4 - 19675229 tcta i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16388950 4 - 16847902 tcta i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91358880 4 + 91754291 tcta i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1425158 4 + 1977891 tcta i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7364729 4 - 7796314 tcta i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839177 4 + 74750902 tcca i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17285740 4 - 17725628 tcta i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6375073 4 + 6778120 tcta i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 13403 4 + 69927 tcta i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 207206 4 + 608964 TTTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32786630 4 + 98207768 GCCA i mm10.chr16 C 0 I 287 s dasNov3.JH569502 2701605 4 - 6579706 TCTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14794615 170 - 22200726 I e micMur3.chr1 88388714 58 + 114275543 I e canFam3.chr33 2322142 0 - 31377067 C a score=457285.000000 s hg38.chr3_KI270934v1_alt 61901 48 + 163458 ATCCCTGAGCCC--AAACTGTTGGGCTGTCCCCGG--ACGAGAACTGATGCC s panTro5.chr3 2534078 48 - 202621043 ATCCCTGAGCCC--AAACTGTTGGGCTGTCCCCGG--ACGAGAACTGATGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124233 48 - 190779 ATCCCTGAGCCC--AAACTGTTGGGCTGTCCCCGG--ACGAGAACTGATGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 75186 48 - 106623 atccctgagccc--aaactgtTGGGCTGTCCCCGG--ACGAGAACTGATGCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2850884 50 - 123690457 ATCCCTGAGCCC--AAACTGTTGGGCTGTCCCCGGACACGAGAACTGACACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2347479 47 - 204787373 attccTGAGCCC--AAACCGT-GGGCTGTCCCCGG--ACGAGAACTGACGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192412646 47 - 192460366 attccTGAGCCC--AAACCGT-GGGCTGTCCCCGG--ACGAGAACTGACGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19151918 47 - 19675229 attccTGAGCCC--AAACCGT-GGGCTGTCCCCGG--ACGAGAACTGACGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16388954 47 - 16847902 attccTGAGCCC--AAACCGT-GGGCTGTCCCCGG--ACAAGAATTGACGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91358884 46 + 91754291 attccTGAGCCC--AAACCGT--GTCTGTTCCCGG--ACGAGAACTGACGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1425162 47 + 1977891 attccTGAGCCC--AAACCAT-GGGCTGCCCCCGG--ACGAGAACTGACGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7364733 46 - 7796314 attccTGAGCCC--AAACCGT--GGCTGTTCCTGG--ACGAGAACTGACACC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839181 47 + 74750902 atccctgagccc--aaactgt-cAGCTGTCCCCAG--ACAAGAACTGACACC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17285744 46 - 17725628 atccctgagccc--aaactgt-cAGCTGTACCCGG--ACAAGAACTGGCG-C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6375077 46 + 6778120 atccctgagccc---aactgt-cGGCTGTCCCTGG--ACAAGAACGGGCGCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 13407 47 + 69927 atccctGAGCCC--AAGCTGT-CAGCTGTCCCCGG--ACAAGAACTGAAGCC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 207210 48 + 608964 ACCCCCGAGTCC--TACCCCAGTGGTAGCTCCCCA--ATGAGAACCCACACC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2322142 46 - 31377067 --cccCGAGCCCTGGGTCTGT-GTCCTACTCCCA---ACGAGAACTCACACC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2701609 47 - 6579706 ACCTCTGAGCCC-TGCACCGC-CAGTGGCTCCCA---ACAAGAATTGACACC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14794615 170 - 22200726 I e mm10.chr16 32786634 287 + 98207768 I e micMur3.chr1 88388714 58 + 114275543 I a score=186440.000000 s hg38.chr3_KI270934v1_alt 61949 20 + 163458 CAACC-CCATGTGGCCTGGTG s panTro5.chr3 2534126 20 - 202621043 CAACC-CCACGTGGCCTGGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124281 20 - 190779 CAACA-CCACGTGGCCTGGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 75234 19 - 106623 CAAC--CCACGTGGCCTGGTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2850934 20 - 123690457 CAACC-CCACATGGCCTGGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2347526 20 - 204787373 CAACC-CTACAGGGCCTGGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192412693 20 - 192460366 CAACC-CTACAGGGCCTGGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19151965 20 - 19675229 CAACC-CTACAGGGCCTGGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389001 20 - 16847902 CAACC-CTACAGGGCCTGGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91358930 20 + 91754291 CAACC-CTACAGGGCCTGGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1425209 20 + 1977891 CAACC-CTACAGGGCCTGGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7364779 20 - 7796314 CAACC-CTACAGGGCCTGGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839228 21 + 74750902 CAACCTCCACATGGCCTGGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17285790 21 - 17725628 CAACCCCCATATGGCCTGGTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6375123 21 + 6778120 CAACCCCCACATGGCCTGGTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 13454 21 + 69927 CAACCCCCACGTGGCCTGGTG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 207258 14 + 608964 C-----CTACA--GCCTGGCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32786921 20 + 98207768 CAATC-CCATGTGGCCTCACT i mm10.chr16 I 287 C 0 s canFam3.chr33 2322188 16 - 31377067 CAGCA-CCC----GCATGGTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2701656 21 - 6579706 CATCTCCCTGGTGGCCTGGTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14794615 170 - 22200726 I e micMur3.chr1 88388714 58 + 114275543 I a score=918450.000000 s hg38.chr3_KI270934v1_alt 61969 71 + 163458 CCTGCGCCTCAGCTGCCTGACCTGCTCCTGATCTCC-C-GGTTTCTTTCCGATTCCTGAAATCATTTCTGGTT s panTro5.chr3 2534146 71 - 202621043 CCTGTGCCTCAGCTGCCTGACCTGCTCCTGATCTCC-C-GGTTTCTTTCCGATTCCTGAAATCATTTCTGGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124301 71 - 190779 CCTGTGCCTCAGCTGCCTGACCTGCTCCTGATCTCC-C-GGTTTCTTTCCGATTCCTGAAATCATTTCTGGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 75253 71 - 106623 CCTGCGCCTCAGCTGCCTGACCTGCTCCTGATCTCC-C-GGTTTCTTTCCGATTCCTGAAATCATTTCTGGTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2850954 71 - 123690457 CCTGCGCCTCAGCTGCTTGACCTGCTCCTGATCTCC-C-AGTTTCTTTCCGATTCCTGAAATCATTTCTGGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2347546 71 - 204787373 CCTGCGCCTCAGCTGCCCGACCTGCTCCTGATCACC-C-GATTTCTTTCCGATTCCTGAAATCGTTTCCGGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192412713 71 - 192460366 CCTGCGCCTCAGCTGCCCGACCTGCTCCTGATCACC-C-AGTTTCTTTCCGATTCCTGAAATCGTTTCCGGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19151985 71 - 19675229 CCTGCGCCTCAGCTGCCCGACCTGCTCCTGATCACC-C-AGTTTCTTTCCGATTCCTGAAATCATTTCCGGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389021 71 - 16847902 CCTGCGCCTCCGCTGCCCGACCTGCTCCTGATCACC-C-AGTTTCTTTCCGATTCCTGAAATCATTTCCGGTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91358950 71 + 91754291 CCTGCGCCTCAGCTGCCCGACCTGCTCCTGATCACC-C-AGTTTCTTTCCGATTCCTGAAATCATTTCCGGTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1425229 71 + 1977891 CCTGCGCCTCCGCTGCCCGACCTGCTCCTGATCACC-C-GGTTTCTTTCCGATTCCTGAAATCATTTCCGGTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7364799 71 - 7796314 CCTGCGCCTCAGCTGCCTGACCTGCTCCTGATCACC-C-GGTTTCTTTCCGATTCCTGAAATCGTTTCCGGTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839249 57 + 74750902 CCTGCGCCTCAGCTACCGGGCCTGTT---------C-C-GGTGTCTTTCCGATTCCTGAAATCATTTC----- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17285811 62 - 17725628 CCTGCGCCTCAGCTGCCCGACCTGTT---------C-C-AGTGTCTTTCCGATTCCTGAAATCATTTCCTGTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6375144 62 + 6778120 CCTGCGCCTCAGCTGCCTGACCTGTT---------C-C-AGTGTCTTTCCAATTCCTGAAATCATTTCCTGTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 13475 62 + 69927 CCTGCGCCTCAGCTGCCTGACCTGTT---------C-C-AGTGTCTTTCCGATTCCAGAAATCATTTCCTGTT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88388772 72 + 114275543 CCTGCACCTCAACTGCCTGGCCTGCTCCTGAGCTCC-CTGGTTTCTTTCTGACTCCTGAAATAGTTTCCAGTT i micMur3.chr1 I 58 C 0 s otoGar3.GL873829 207272 72 + 608964 CCTGCACCTCAACAGTCCAGCCAGCTCCTGATCTCC-CTGTTCTTTTTCTGATTCCTGAAATAGCTTTCAGCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32786941 72 + 98207768 CCTAGACCTCAGCTGCCTGACCTGATCCTGAACTCCAC-GGTTGCTCTCTGACCTCTGAAACATCTGCTAGTT i mm10.chr16 C 0 I 26 s canFam3.chr33 2322204 70 - 31377067 CTTGCACTTCAGCT-CCTGACCTGCTTCCTCCTCCC-T-GGCCCCTTTCTGACTCCTGAAATGGTTTCCAGTT i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2701677 67 - 6579706 CCTGAACCACAGCTGCCTGACCTGCTTCTGAGGCCC-C-----TGTTTCTGACACCTGAAATAGTTTCCTGCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14794615 170 - 22200726 I a score=204496.000000 s hg38.chr3_KI270934v1_alt 62040 16 + 163458 TGGGGGCTTAGACCTG s panTro5.chr3 2534217 16 - 202621043 TGGGGGCTTAGACCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124372 16 - 190779 TGGGGGCTTAGACCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 75324 16 - 106623 TGGGGGCTTAGACCTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851025 16 - 123690457 TGGGGGCTTAGACCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2347617 16 - 204787373 TGGGAGCGCAGACCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192412784 16 - 192460366 TGGGAGCGCAGACCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152056 16 - 19675229 TGGGAGCGCAGACCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389092 16 - 16847902 TGGGAGCGCAGACCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359021 16 + 91754291 TAGGAGCGCAGACCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1425300 16 + 1977891 TGGGAGCGCAGACCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7364870 16 - 7796314 TGGGAGCGCAGACCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839306 15 + 74750902 -GGGGGTTCAGACCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17285873 16 - 17725628 TGGGGGTTCAGACCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6375206 16 + 6778120 CAGGGGTTCAGACCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 13537 16 + 69927 TGGGGGTTCAGACCTG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88388844 16 + 114275543 TGGTGGCTCAGATCTG i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 207344 16 + 608964 TGGTGGTTCAGATCTG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2322275 16 - 31377067 AGGGGGCTCGCATCTG i canFam3.chr33 I 1 I 254 s dasNov3.JH569502 2701744 16 - 6579706 TGGGGGCTCAGGCCTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14794615 170 - 22200726 I e mm10.chr16 32787013 26 + 98207768 I a score=117845.000000 s hg38.chr3_KI270934v1_alt 62056 12 + 163458 AGATTCAAAACT s panTro5.chr3 2534233 12 - 202621043 AGATTCAAAACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124388 12 - 190779 AGATTCAAAACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 75340 12 - 106623 AGATTCAAAACT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851041 12 - 123690457 AGATTCAAAACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2347633 12 - 204787373 AGACTCAAAACT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192412800 12 - 192460366 AGACTCAAAACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152072 12 - 19675229 AGACTCAAAACT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389108 12 - 16847902 AGACTCAAAACT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359037 12 + 91754291 AGATTCAAAACT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1425316 12 + 1977891 AGATTCAAAACT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7364886 12 - 7796314 GGATTCAAAACT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839321 12 + 74750902 ACATTCAAACCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17285889 12 - 17725628 ACAGTCAAACCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6375222 12 + 6778120 ACATTCAAACCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 13553 12 + 69927 ACATTCAAACCT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88388860 12 + 114275543 ACATTCAACCCT i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 207360 12 + 608964 ACGTCTGACCCC i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2701760 12 - 6579706 ACACTCAACTCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14794615 170 - 22200726 I e mm10.chr16 32787013 26 + 98207768 I e canFam3.chr33 2322291 254 - 31377067 I a score=69445.000000 s hg38.chr3_KI270934v1_alt 62068 5 + 163458 GGCTT s panTro5.chr3 2534245 5 - 202621043 GGCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124400 5 - 190779 GGCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 75352 5 - 106623 GGCTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851053 5 - 123690457 GGCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2347645 5 - 204787373 GGCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192412812 5 - 192460366 GGCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152084 5 - 19675229 GGCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389120 5 - 16847902 GGCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359049 5 + 91754291 GGCTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1425328 5 + 1977891 GGCTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7364898 5 - 7796314 GGCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839333 5 + 74750902 GGCTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17285901 5 - 17725628 GGCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6375234 5 + 6778120 GGCTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 13565 5 + 69927 GGCTT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88388872 5 + 114275543 GGCTT i micMur3.chr1 C 0 C 0 s dasNov3.JH569502 2701772 5 - 6579706 GACTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14794615 170 - 22200726 I e mm10.chr16 32787013 26 + 98207768 I e canFam3.chr33 2322291 254 - 31377067 I e otoGar3.GL873829 207372 0 + 608964 C a score=13600.000000 s hg38.chr3_KI270934v1_alt 62073 1 + 163458 C s panTro5.chr3 2534250 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124405 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 75357 1 - 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851058 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2347650 1 - 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192412817 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152089 1 - 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389125 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359054 1 + 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1425333 1 + 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7364903 1 - 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839338 1 + 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17285906 1 - 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6375239 1 + 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 13570 1 + 69927 C i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88388877 1 + 114275543 C i micMur3.chr1 C 0 I 311 e proCoq1.NW_012133858v1 14794615 170 - 22200726 I e mm10.chr16 32787013 26 + 98207768 I e dasNov3.JH569502 2701777 0 - 6579706 C e canFam3.chr33 2322291 254 - 31377067 I e otoGar3.GL873829 207372 0 + 608964 C a score=1388199.000000 s hg38.chr3_KI270934v1_alt 62074 150 + 163458 CCAgccgggtgc-ggtggctcacgccaataatcccagtgctttgggaagcagaggcaggtgggtcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaattagccaggagtggt s panTro5.chr3 2534251 150 - 202621043 CCggctgggtgc-ggtggctcacgccaataatcccagtgctttgggaagcagaggcaggtgggtcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaattagccaggagtggt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124406 150 - 190779 CCggccgggtgc-ggtggctcatgccaataatcccagtgctttgggaagcagaggcaggtgggtcacccgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaattagccaggagtggt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 75358 150 - 106623 CCggccgggtgc-agtggctcatgccaataatcccagtgctttgggaagcagaggcaggtgggtcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaattagccaggagtggt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851059 150 - 123690457 CCAgccgggtgc-agtggctcacaccaataatcccagtgctttgggaaacagaggtgggtgggtcaccttaggtcaggtgttcgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatacaaaaattagccaggagtggt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2347651 150 - 204787373 CTggctagatgc-ggtggctcacgccaataatcccagtgctttgggaagctgaggcgggtgggtcatttgatgtcaggagttcaagaccaacctgaccaacatggagaaaccccgtctctactaaaaatacaaaaatcagccgggagtggt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192412818 150 - 192460366 CTggctagatgc-ggtggctcacgccaataatcccagtgctttgggaagctgaggcgggtgggtcatttgatgtcaggagttcaagaccaacctgaccaacatggagaaaccccgtctctactaaaaatacaaaaatcagccgggagtggt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152090 150 - 19675229 CTggctagatgc-ggtggctcacgccaataatcccagtgctttgggaagctgaggcgggtgggtcatttgatgtcaggagttcaagaccaacctgaccaacatggagaaaccccgtctctgctaaaaatacaaaaatcagccgggagtggt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389126 150 - 16847902 CTggctagatgc-ggtggctcacgccaataatcccagtgctttgggaagctgaggcgggtgggtcatctgatgtcaggagttcaagaccaacctgaccaacatggagaaaccccgtctctactaaaaatacaaaaatcagccgggagtggt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359055 150 + 91754291 CTggctaggtgc-ggtggctcacgccaataatcccagtgctttgggaagctgaggtggatgggtcacctgatgtcaggagttcaagaccaacctgatcaacatggagaaaccccgtctctactaaaaacacaaaaatcagccgggtgtgct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1425334 150 + 1977891 CCggctagatgc-agtggctcacgccaataatcccagtgctttgggaagctgaggcgggtgggtcatctgatgtcaggagttcaagaccaacctgaccaacagggagaaaccccgtctctactaaaaatacaaaaatcagccgggagtggt i manLeu1.NW_012102020v1 C 0 I 1915 s colAng1.NW_012118932v1 7364904 150 - 7796314 CCggctaggtgt-ggtggctcacgccagtaatcccagtgctttgggaagctgaggcgggtgggtcacctgatgtcaggagttcaagaccaacctgaccaacatggagaaaccccgtctctactaaaaatacaaaaactagccaggagtggt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839339 150 + 74750902 CTggctgggcac-gggggctcacacccataatcccatcactttgggaagccgaggcaggtggatttcctgaagtcaggagttcaagaccagcctggccaacatggcaaggccctgtctctactaaaaatacaaaaattagccaggtgtggt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17285907 148 - 17725628 CTggccgggcacggggggctcacgcccataatcccatcactttgggaggctgaggcaggtgaattacctgaggtcaggagttcaagaccagcctggccaacatggcaaa--cccgtctctactaaaattac-aaaattatccaggtgtggt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6375240 150 + 6778120 CTggccgggcac-gggggctctcggccataatcccatcactctgggaggccgaagcaggtggatcacctgaggtcaggagttcaagaccagcctggccaacatggcaaacccctgtctctactcaaaatacaaaaattagccaggtgtggt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 13571 150 + 69927 CCggccgggcac-gggggctcacgcccgtaatcccatcactctgggaggccgaggcaggtggatcacctgagatcaggagttcaagaccagcctggccaacatggcaaacccctgtctctactaaaaatacaaaaattagccaggtgtggt i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 14794615 170 - 22200726 I e mm10.chr16 32787013 26 + 98207768 I e micMur3.chr1 88388878 311 + 114275543 I e dasNov3.JH569502 2701777 0 - 6579706 C e canFam3.chr33 2322291 254 - 31377067 I e otoGar3.GL873829 207372 0 + 608964 C a score=1232385.000000 s hg38.chr3_KI270934v1_alt 62224 136 + 163458 agtgtgcacctgtaatcccagctactagggaggttgaggcaggagaattgcttgaatccgggaggcggaggttgcagtgagccgagatcgtgccattgcactccag-----cctggacgacagagcgagaatctgtctcaa s panTro5.chr3 2534401 136 - 202621043 agtgtgcacctgtaatcccagctactagggaggttgaggcaggagaattgcttgaatccgggaggcggaggttgcagtgagccgagatcatgccattgcactccag-----cctggacgacagagagagaatccgtctcaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124556 136 - 190779 agtgtgcacctgtaatcccagctactagggaggttgaggcaggagaattgcttgaatccgggaggtggaggttgcagtgagccgagatcatgccattgcactccag-----cctggacgacagagagagaatccgtctcaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 75508 136 - 106623 agtgtgcacctgtaatcccagctactagggaggttgaggcaggagaattgcttgaatccgggaggtggaggttgcagtgagccgagatcatgccattgtgctccag-----cctggacgacagagcgagaatccgtctcaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851209 136 - 123690457 ggtgggcgcctgtaatcccagctactagggaggttgaggcaggagaatcgcttgaatctgggaggcagaggttgcagtgagccaagattgcgccattgcactccag-----cctggatgacagagcgagaatctgtctcaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2347801 141 - 204787373 ggcgggtgcctgtagtcccaggtactcaggagactgaggcaggagaattgcttgaaccagggaggcggaggttgcagtgagccgagatcgcgccattgcactccattgcactctgaacaacagagtgagaatctgtctcag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192412968 141 - 192460366 ggcgggcacctgtagtcccaggtactcaggagactgaggcaggagaattgcttgaacctgggaggcggaggttgcagtgagccgagatcgcgccattgcactccattgcactctgaacaacagagtgagaatctgtctcag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152240 141 - 19675229 ggcgggcacctgtagtcccaggtactcaggagactgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagccgagatcgcgccattgcactccattgcactctgaacaacagagtgagaatctgtctcag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389276 141 - 16847902 ggcaggcacctgtaatcccaggtactcaggagactgaggcaggagaattgcttgaacctgggaggcggaggttgcagtgagccgagatcgcgccattgcactccactgcactctggacaacagagcgagaatctgtctcaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359205 141 + 91754291 ggtgggcacctgtaatcccagctactcgggagactgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagccgagatcgcgccattgcactccattgcactctggacaacagagcgagaatctgtctcag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427399 141 + 1977891 ggcgggcacctgtaatcccaggtactcaggagactgaggcaggagaattgcttgaacctgggcggcggaggttgcagtgagccgagatggcgccattgcactccattgcactctggacaacagagcgagaatctgtctcaa i manLeu1.NW_012102020v1 I 1915 C 0 s colAng1.NW_012118932v1 7365054 141 - 7796314 ggcaggcacttgtaatcccagctactcgggagactgaggcaggagaattgcttgaacctgggaagcggaggttgcagtgagccgagatcgcgccattgcactccattgcactctggacaacagagcgagaatctgtctcaa i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839489 134 + 74750902 ggtgggcacctccaatcccagctactcaggaggccaaggcaggacaatcacttgaacccgggagacggaggttgcagtgagccaagatcacagcatcgcacttcag-----cccggacgacagagcgaga--ctgtctcaa i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17286055 136 - 17725628 ggtgggcacctctaatcccagctactcaggaggccgaggcaggagaatcacttgaagccaggagacggaggctgcggtgagccaagatcacgccatcgcacttcag-----cctggacaacagagcgagactctgtctcca i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6375390 136 + 6778120 ggtgggcgcctctaatcccagttactcaggaggctgaggcaggagaatcacttgaacccaggagacggaggttgcagggagccaagatcacgccattgcacttcag-----cctggacgacagagcgagacgctgtctcaa i cebCap1.NW_016107444v1 C 0 I 30 s aotNan1.NW_018503669v1 13721 136 + 69927 ggcgggcgcctgtaatcccagctactcaggaggccgaggcaggagagtcacttgaacccaggagacggaggttgtggtgagccaagatcacgccatcgcacttcag-----cctggacgacagagtgagactctgtctcaa i aotNan1.NW_018503669v1 C 0 I 26 e proCoq1.NW_012133858v1 14794615 170 - 22200726 I e mm10.chr16 32787013 26 + 98207768 I e micMur3.chr1 88388878 311 + 114275543 I e dasNov3.JH569502 2701777 0 - 6579706 C e canFam3.chr33 2322291 254 - 31377067 I e otoGar3.GL873829 207372 0 + 608964 C a score=80378.000000 s hg38.chr3_KI270934v1_alt 62360 21 + 163458 ---gaaaaataaa----------------agaaaa----------gaaaa s panTro5.chr3 2534537 21 - 202621043 ---gaaaaataaa----------------agaaaa----------gaaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124692 20 - 190779 ---gaaaaat-aa----------------agaaaa----------gaaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 75644 21 - 106623 ---gaaaaataaa----------------agaaaa----------gaaaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851345 21 - 123690457 ---gaaaaagaaa----------------agaaaa----------aaaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2347942 21 - 204787373 ---gaaaaagaag----------------agaaag----------agaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413109 21 - 192460366 ---gaaaaagaag----------------agaaag----------agaaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152381 31 - 19675229 ---gaaaaagaag----------------agaaagagaaagagaaagaaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389417 21 - 16847902 ---gaaaaagaag----------------agaaaa----------agaaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359346 37 + 91754291 ---gaaaaagaagagaaagagaaagagaaagaaag----------agaaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427540 21 + 1977891 ---gaaaaagaag----------------agaaag----------agaaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7365195 29 - 7796314 ---gaaaaagaag----------------agaaagagaaagag--aaaga i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17286191 24 - 17725628 aacaatgaataaa----------------aggaaa----------caaaa i saiBol1.JH378146 C 0 I 3 e proCoq1.NW_012133858v1 14794615 170 - 22200726 I e mm10.chr16 32787013 26 + 98207768 I e aotNan1.NW_018503669v1 13857 26 + 69927 I e micMur3.chr1 88388878 311 + 114275543 I e dasNov3.JH569502 2701777 0 - 6579706 C e calJac3.chr17 73839623 0 + 74750902 C e cebCap1.NW_016107444v1 6375526 30 + 6778120 I e canFam3.chr33 2322291 254 - 31377067 I e otoGar3.GL873829 207372 0 + 608964 C a score=14535.000000 s hg38.chr3_KI270934v1_alt 62381 5 + 163458 gaaaa---------- s panTro5.chr3 2534558 5 - 202621043 gaaaa---------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124712 5 - 190779 gaaaa---------- i panPan2.chrUn_NW_014024201v1 C 0 M 118 s gorGor5.CYUI01000576v1 75665 5 - 106623 gaaaa---------- i gorGor5.CYUI01000576v1 C 0 I 13 s rheMac8.chr2 2347963 15 - 204787373 gagaaagagagagag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413130 15 - 192460366 gagaaagagagagag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152412 15 - 19675229 gagaaagagagagag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389438 15 - 16847902 gagagaaagagaaaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359383 15 + 91754291 gagagaaagagaaag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427561 15 + 1977891 gagagaaagagaaaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7365224 15 - 7796314 gagagaaagagaaaa i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14794615 170 - 22200726 I e mm10.chr16 32787013 26 + 98207768 I e aotNan1.NW_018503669v1 13857 26 + 69927 I e micMur3.chr1 88388878 311 + 114275543 I e dasNov3.JH569502 2701777 0 - 6579706 C e saiBol1.JH378146 17286215 3 - 17725628 I e calJac3.chr17 73839623 0 + 74750902 C e cebCap1.NW_016107444v1 6375526 30 + 6778120 I e canFam3.chr33 2322291 254 - 31377067 I e otoGar3.GL873829 207372 0 + 608964 C e nomLeu3.chr11 2851366 0 - 123690457 C a score=794517.000000 s hg38.chr3_KI270934v1_alt 62386 182 + 163458 agaaaaag--aaaaagaaaa--------CTGGCTTCCCAgccgggcgcaatgactcaacgcctgtaatcccagcactttgggaggctga--ggtgggtggatcatgaggtcaagagttcaagactagcctggccaagatgctgaaacctgaaactccatctctactaaaaatacaaaaattagccaggtatggt s panTro5.chr3 2534563 190 - 202621043 agagaaag--aaaaagaaaaagaaaaaACTGGCTTCCCAgccgggcgcaatgactcaacgcctataatcccagcactttgggaggctga--ggtgggtggatcacgaggtcaagagttcaagactagcctggccaagatgctgaaacctgaaactccatctctactaaaaatacaaaaattagccaggtatggt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 75683 182 - 106623 agaaaaag--aaaaacaaaa--------CTGGCTTCCCAgcagggcgcaatgactcaacgcctgtaatcccagcactttgggaggctga--ggtgggtggatcacgagatcaagagttcaagactagcctggccaagatgctgaaacctgaaactccatctctactaaaaatacaaaaattagtcaggtatggt i gorGor5.CYUI01000576v1 I 13 C 0 s nomLeu3.chr11 2851366 180 - 123690457 agaaaaag---aaaacaaaa--------CTGGCTTCCCAgccaggcgcaatgactc-atgcctataatcccggcactttgggaggccga--ggcgggtggatcacaaggtcaagagctcaagactagcctgaccaacatggtgaaacctgaaactccatctctcctaaaaatacaaaaattagccgggtatggt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2347978 180 - 204787373 agaaaaagaaaAAAACAAAA--------CTGGCTTTCCAgccaggcgcaatgactc-atgcctgtaatcccagcactttgggaggctga--ggtgagtggatcacaaggtcaagagttcgagactagcctggccaagatggtgaaacctgaaaccctgtctctactaaaca--taaaaattagcc-ggtttgct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413145 182 - 192460366 agaaaaagaaaAAAACAAAA--------CTGGCTTTCCAgccaggcgcaatgactc-atgcctgtaatcccagcactttgggaggctga--ggtgagtggatcacaaggtcaagagttcgagactagcctggccaagatggtgaaacctgaaaccctgtctctactaaacatgtaaaaattagcc-ggtttgct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152427 182 - 19675229 agaaaaagaaaaaaacaaaA--------CTGGCTTTCCAgccaggcgcaatgactc-atgcctgtaatcccagcactttgggaggctga--ggtgagtggatcacaaggtcaagagttcgagactagcctggccaagatggtgaaacctgaaaccccgtctctactaaacatataaaaattagcc-ggtttgct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389453 182 - 16847902 agaaaaagaaaaaaacaaaa--------CTGGCTTTCCAgctaggcgcaatgactc-atgcctgtaatcccagcactttgggaggctga--ggtgggtggatcacaaggtcaagagttcgagactagcctggccaagatggtgaaacctgaaaccccatctctactaaacatgtaaaaattagcc-ggtttgct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359398 182 + 91754291 agaaaaagaaaAAAACAAAA--------CTGGCTTTCCAgccaggcgcaatgactc-acgcctgtaatcccagcactttgggaggctga--ggtgggtggatcagaaggtcaagagttcgagactagcctggccaagatggtgaaacctgaaaccccgtctctactaaacatataaaaattagct-ggtttgct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427576 182 + 1977891 agaaaaagaaaaaaacaaaa--------CTGGCTTTCCAgccaggcgcaatgactc-atgcctgtaatcccagcactttgggaggctga--ggtgggtggatcacaaggtcaagagttcgagactagcctggacaagatggtgaaatctgaaaccccgtctctactaaacatgtaaaaattagcc-ggtttgct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7365239 184 - 7796314 agaaaaagaaaaaaacaaaa--------CTGGCTTTCCAgccaggcgcaatgactc-acgcctgtaatcccagcactttgggaggctgaggggggggtggatcacaaggtcaagagttcgagactagcctggccaagatggtgaaacctgaaaccccgtctctactacacatataaaaagtagcc-ggtttgct i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14794615 170 - 22200726 I e mm10.chr16 32787013 26 + 98207768 I e aotNan1.NW_018503669v1 13857 26 + 69927 I e micMur3.chr1 88388878 311 + 114275543 I e dasNov3.JH569502 2701777 0 - 6579706 C e saiBol1.JH378146 17286215 3 - 17725628 I e calJac3.chr17 73839623 0 + 74750902 C e cebCap1.NW_016107444v1 6375526 30 + 6778120 I e canFam3.chr33 2322291 254 - 31377067 I e otoGar3.GL873829 207372 0 + 608964 C e panPan2.chrUn_NW_014024201v1 124717 118 - 190779 M a score=734036.000000 s hg38.chr3_KI270934v1_alt 62568 136 + 163458 ggtgcgggcctgtaatcccagctactcagaaggttgaggcaggagaatggcttgaacctgggaggc-ggaggttgtggtgagccaagatcgcaccactgcactccagcttggatgacagagtgagactcagtctcag s panTro5.chr3 2534753 136 - 202621043 ggtgcgggcctgtaatcccagctactcagaaggttgaggcaggagaatggcttgaacctgggaggc-ggaggttgtggtgagccaagatcgcaccactgcactccagcttgggcgacagagtgagactcagtctcag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124838 137 - 190779 ggtgcgggcctgtaatcccagctactcagaaggttgaggcaggagaatggcttgaacctgggaggcgggaggttgtggtgagccaagatcgcaccactgcactccagcttgggcgacagagtgagactcagtctcag i panPan2.chrUn_NW_014024201v1 M 118 C 0 s gorGor5.CYUI01000576v1 75865 136 - 106623 ggtgcgggcctgtaatcccagctactcagaaagttgaggcagaagaatggcttgaacctgggaggc-ggaggttgtggtgagccaagattgcaccactgcactccagcttgggcgacagagtgagactcagtctcag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851546 136 - 123690457 ggtgcgggcctgtaatcccagctactcagaaggttgaggcaggagaatggcttgaacctgggaggc-ggaggttgcagtgagccaagatcgcaccattgcactccaggctgggcgacagagcgagactcagtctcag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348158 136 - 204787373 ggcgcgggcttgtaatcccagctactcgggaggcggaggcaggagaatgtcttgaacctgggaagt-ggaggttgcagtgagccgagatcacaccactacactccagcctgggcaacagagcgagacacagtctcaG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413327 135 - 192460366 ggcgcgggcttgtaatcccagctactcgggaggcggaggcaggagaatgtcttgaacctgggaggt-ggaggttgcagtgagccgagatctcaccactacactccagcct-ggcgacagagcgagacacagtctcaG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152609 135 - 19675229 ggcgcgggcttgtaatcccagctactcgggaggcggaggcaggagaatgtcttgaacctgggaggt-ggaggttgcagtgagccgagatctcaccactatactccagcct-ggcgacagagcgagacacagtctcaG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389635 136 - 16847902 ggcgcgggcttgtaatcccagctactcgggaggcggaggcaggagaatgtctcgaacctgggaggt-ggaggttgcagtgagccgagatcgcaccactgcactccagcctgggcgacagagcgagacacagtctcaG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359580 136 + 91754291 ggcgcaggtttgtaatcccagctactcgggaggcggaggcaggagaatgtcttgaacctgggaggt-ggaagttgcagtgagccgagatcgcaccactatactccagcctgggcaacagagtgagacacagtctcag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427758 136 + 1977891 ggcgcgggcttgtaatcccagctactcgggaggcggaggcaggagaatgtcttgaacctaggaggt-ggaggttgcagtgagccgagatcgcaccactgcactccagcctgggcgacagagcgagacacagtctcaG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7365423 136 - 7796314 ggcacgggcttgtaatcccagctacatgggatgcggaggcaggagaatgtcttgaacctgggaggt-ggaggttgcagtgagccgagattgcaccaccgcactccagcctgggcaacagagcgagacacagtctcgg i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14794615 170 - 22200726 I e mm10.chr16 32787013 26 + 98207768 I e aotNan1.NW_018503669v1 13857 26 + 69927 I e micMur3.chr1 88388878 311 + 114275543 I e dasNov3.JH569502 2701777 0 - 6579706 C e saiBol1.JH378146 17286215 3 - 17725628 I e calJac3.chr17 73839623 0 + 74750902 C e cebCap1.NW_016107444v1 6375526 30 + 6778120 I e canFam3.chr33 2322291 254 - 31377067 I e otoGar3.GL873829 207372 0 + 608964 C a score=100367.000000 s hg38.chr3_KI270934v1_alt 62704 24 + 163458 -----aaaacaaaacaaaacaaaa------------------GCAAT s panTro5.chr3 2534889 39 - 202621043 -----aaaacaaaacaaaacaaaacaaaacaaaac---aaaaGCAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124975 39 - 190779 -----aaaacaaaacaaaacaaaacaaaacaaaac---aaaaGCAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76001 29 - 106623 -----aaaacaaaaccaaacaaaa----------c---aaaaGGAAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851682 29 - 123690457 -----aaaagaaaagaaaacaaaa----------c---aaaaacaaC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348294 39 - 204787373 -----aaaacaaaacaaaacaaaacaaaacaaaac---ataaacaaC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413462 39 - 192460366 -----aaaacaaaacaaaacaaaacaaaacaaaac---ataaacaaC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152744 42 - 19675229 -----aaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaCAAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389771 32 - 16847902 -----aaaacaaaacaaaacaaaacaaa----------acaaaCAAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359716 29 + 91754291 -----aaaacaaaacaaaacaaaac-------------ataaacaaC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427894 32 + 1977891 -----aaaacaaaacaaaacaaaacaaa----------acaaaCAAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7365559 23 - 7796314 -----aaaacaaaacaaaacaaaa--------------acaa----- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839623 26 + 74750902 agcaataaataaaaggaaagaaaaCC--------------------- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14794615 170 - 22200726 I e mm10.chr16 32787013 26 + 98207768 I e aotNan1.NW_018503669v1 13857 26 + 69927 I e micMur3.chr1 88388878 311 + 114275543 I e dasNov3.JH569502 2701777 0 - 6579706 C e saiBol1.JH378146 17286215 3 - 17725628 I e cebCap1.NW_016107444v1 6375526 30 + 6778120 I e canFam3.chr33 2322291 254 - 31377067 I e otoGar3.GL873829 207372 0 + 608964 C a score=7098.000000 s hg38.chr3_KI270934v1_alt 62728 1 + 163458 T s panTro5.chr3 2534928 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125014 1 - 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76030 1 - 106623 T i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851711 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348333 1 - 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413501 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152786 1 - 19675229 T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389803 1 - 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359745 1 + 91754291 T i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427926 1 + 1977891 T i manLeu1.NW_012102020v1 C 0 C 0 s proCoq1.NW_012133858v1 14794785 1 - 22200726 T i proCoq1.NW_012133858v1 I 170 C 0 s canFam3.chr33 2322545 1 - 31377067 T i canFam3.chr33 I 254 C 0 e mm10.chr16 32787013 26 + 98207768 I e aotNan1.NW_018503669v1 13857 26 + 69927 I e micMur3.chr1 88388878 311 + 114275543 I e dasNov3.JH569502 2701777 0 - 6579706 C e saiBol1.JH378146 17286215 3 - 17725628 I e calJac3.chr17 73839649 0 + 74750902 C e cebCap1.NW_016107444v1 6375526 30 + 6778120 I e otoGar3.GL873829 207372 0 + 608964 C e colAng1.NW_012118932v1 7365582 0 - 7796314 C a score=13600.000000 s hg38.chr3_KI270934v1_alt 62729 1 + 163458 G s panTro5.chr3 2534929 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125015 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76031 1 - 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851712 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348334 1 - 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413502 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152787 1 - 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389804 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359746 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427927 1 + 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73839649 1 + 74750902 G i calJac3.chr17 C 0 C 0 s aotNan1.NW_018503669v1 13883 1 + 69927 G i aotNan1.NW_018503669v1 I 26 C 0 s proCoq1.NW_012133858v1 14794786 1 - 22200726 G i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 207372 1 + 608964 G i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32787039 1 + 98207768 G i mm10.chr16 I 26 C 0 s canFam3.chr33 2322546 1 - 31377067 G i canFam3.chr33 C 0 C 0 e micMur3.chr1 88388878 311 + 114275543 I e dasNov3.JH569502 2701777 0 - 6579706 C e saiBol1.JH378146 17286215 3 - 17725628 I e cebCap1.NW_016107444v1 6375526 30 + 6778120 I e colAng1.NW_012118932v1 7365582 0 - 7796314 C a score=40155.000000 s hg38.chr3_KI270934v1_alt 62730 3 + 163458 GCT s panTro5.chr3 2534930 3 - 202621043 GCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125016 3 - 190779 GCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76032 3 - 106623 GCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851713 3 - 123690457 GCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348335 3 - 204787373 GCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413503 3 - 192460366 GCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152788 3 - 19675229 GCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389805 3 - 16847902 GCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359747 3 + 91754291 GCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427928 3 + 1977891 GCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7365582 2 - 7796314 -CT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839650 3 + 74750902 GCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17286218 3 - 17725628 GCC i saiBol1.JH378146 I 3 C 0 s aotNan1.NW_018503669v1 13884 3 + 69927 GCC i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14794787 3 - 22200726 GCT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 207373 3 + 608964 GCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32787040 3 + 98207768 GCT i mm10.chr16 C 0 C 0 s canFam3.chr33 2322547 3 - 31377067 GCC i canFam3.chr33 C 0 C 0 e micMur3.chr1 88388878 311 + 114275543 I e dasNov3.JH569502 2701777 0 - 6579706 C e cebCap1.NW_016107444v1 6375526 30 + 6778120 I a score=169446.000000 s hg38.chr3_KI270934v1_alt 62733 13 + 163458 TCCCTCTCCCACA s panTro5.chr3 2534933 13 - 202621043 TCCCTTTCCCACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125019 13 - 190779 TCCCTCTCCCACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76035 13 - 106623 TCCCTCTCCCACA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851716 13 - 123690457 TCCCCCTCCCACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348338 13 - 204787373 TCCCTCTTCCACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413506 13 - 192460366 TCCCTCTTCCACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152791 13 - 19675229 TCCCTCTTCCACA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389808 13 - 16847902 TCCCTCTTCTACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359750 13 + 91754291 TCCCTCTTCCACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427931 13 + 1977891 TCCCTCTTCCACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7365584 13 - 7796314 TTCCTCTTCCACA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839653 13 + 74750902 TCCCTCTTCAACA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17286221 13 - 17725628 TCCCTCTTCAACA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6375556 13 + 6778120 TCCCTCTTCAACA i cebCap1.NW_016107444v1 I 30 C 0 s aotNan1.NW_018503669v1 13887 13 + 69927 TCCCTCTTCAACA i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14794790 13 - 22200726 TCCATCTTCAACT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 207376 13 + 608964 TCCCTCTTCAACT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32787043 13 + 98207768 TCTCTCTCCCATG i mm10.chr16 C 0 C 0 s canFam3.chr33 2322550 13 - 31377067 TCCCTCCTTGGCG i canFam3.chr33 C 0 C 0 e micMur3.chr1 88388878 311 + 114275543 I e dasNov3.JH569502 2701777 0 - 6579706 C a score=684678.000000 s hg38.chr3_KI270934v1_alt 62746 59 + 163458 AGGATTCACACTCGCTACTTT-GATTATCACATGCCGGGGGCATTTGTCACTTATTTGGC s panTro5.chr3 2534946 59 - 202621043 AGGATTCACACTCGCTACTTT-GATTATCACGTGCCGGgggcatttgtcacttatttggc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125032 59 - 190779 AGGATTCACACTCGCTACTTT-GATTATCACGTGCCGGgggcatttgtcacttatttggc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76048 60 - 106623 CAGATTCACACTCGCTACTTTGGATTATCACGTCCCGGGGGCATCTGTCACTTATTTGGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851729 58 - 123690457 AGGATTCACACTCGCTGCTTT-GCTTATCACGTGCC-Ggggcatttgtcatttatttggc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348351 59 - 204787373 AGGATTCACACTCGCTACTTT-GATTGTCACGTGCCAGgggcatttgtcatttatttggc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413519 59 - 192460366 AGGATTCACACTCGCTACTTT-GATTGTCACGTGCCAGGGGCATTTGTCATTTATTTGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152804 59 - 19675229 AGGATTCACACTCGCTACTTT-GATTGTCATGTGCCGGGAGcatttgtcatttatttggc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389821 59 - 16847902 AGCATTCACAATCGCTACTTT-GATTGTCACGTGCCGGgggcatttgtcatttgtttggc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359763 59 + 91754291 AGGACTCACACTCGCTACTTT-GATTGTCACGTGCCAGGGGCATTTGTCCTTTATTTGGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427944 59 + 1977891 AGGATTCACAATCGCTACTTT-GATTGTCACGTGCCGGGGGCATTTGTCATTTGTTTGGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7365597 59 - 7796314 AGGATTCACACTCGCTACTTT-GATTGTCACGTGCCGGGGGCATTTGTCGTTTATTTGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839666 40 + 74750902 GGGGTCCACACGTGCTCCTTT-GGTTACTGTGTGCCGA-------------------GGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17286234 59 - 17725628 AGGATCCACACCTGCTCCTTT-GACTACCATGTGCCGAGGGCATCTGTCACTTATTTGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6375569 59 + 6778120 AGGATCCACACTTGCTCCTCC-GATTACCATGTGCCGAGGGCATCTGTCACTTACTTGGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 13900 59 + 69927 AGGACCCACACTCGCTCCTTC-AATTACCAGGTGCCGAGGGCCTCTGTCACTTATTTGGC i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14794803 59 - 22200726 AGGATGCACACTTGCCACTTT-GGTTATCACGTGCAGAGGGCATTCGTCATTTATTTGGC i proCoq1.NW_012133858v1 C 0 I 235 s otoGar3.GL873829 207389 50 + 608964 AGGATACATACTTGTTACTT----------CGTACAAAgggcatttgtcacttactgggc i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32787056 55 + 98207768 AGGATTTGCACTCGCCACTTT-GAT----GTTTGTGACAGACACCTGCCATCTGTCCTAC i mm10.chr16 C 0 C 0 s canFam3.chr33 2322563 58 - 31377067 AGGGTTCACACTTCCCATTTT-GATTATCATGCGCGGTAGGCATTGGTCATGTCTCTGC- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2701777 58 - 6579706 AGGATTTGCACTTACTACTT--GATTATCATGTGCCAtggggatttgtaatttacttggt i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88388878 311 + 114275543 I a score=34723.000000 s hg38.chr3_KI270934v1_alt 62805 3 + 163458 CAT s panTro5.chr3 2535005 3 - 202621043 cgt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125091 3 - 190779 cgt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76108 3 - 106623 CAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851787 3 - 123690457 cat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348410 3 - 204787373 cat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413578 3 - 192460366 CAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152863 3 - 19675229 cat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389880 3 - 16847902 cat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359822 3 + 91754291 CAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1428003 3 + 1977891 CAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7365656 3 - 7796314 CAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839706 3 + 74750902 CAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17286293 3 - 17725628 CAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6375628 3 + 6778120 CAT i cebCap1.NW_016107444v1 C 0 I 141 s aotNan1.NW_018503669v1 13959 3 + 69927 CAT i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 207439 3 + 608964 tat i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32787111 2 + 98207768 -AT i mm10.chr16 C 0 C 0 s canFam3.chr33 2322621 3 - 31377067 TGT i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2701835 3 - 6579706 tgt i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14794862 235 - 22200726 I e micMur3.chr1 88388878 311 + 114275543 I a score=721916.000000 s hg38.chr3_KI270934v1_alt 62808 84 + 163458 CGGGTGTCGAGCCCCCGTGCCATGTTTAGGGAACTCCTT----ACAGT-GGGAGTCACGATCGGCCTCACTGCTGCTAAGAGAACTCCA s panTro5.chr3 2535008 84 - 202621043 cgggtgtcgagcccccgtgccatgtttagggaactcctt----acagc-gggagtcacgatcggcctcgctgctgctgagagaactcca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125094 84 - 190779 cgggtgtcgagcccccgtgccatgtttagggaactcctt----acagc-gggagtcacgattggcctcgctgctgctgagagaactcca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76111 84 - 106623 TGGGTATCGAGCCCCCGTGCCATGTTGAGGGAACTCCTT----ACAGC-GGGAGTCACGATGGGCCTCGCTGCTGCTGAGAGAACTCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851790 84 - 123690457 cgggtgtcaaacccccgtgccatgtttagggaactcctt----acagt-gggagtcacgATGGGCCTCGCTGCTGCTAAGAGAACTCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348413 84 - 204787373 tgggggtcgaatctccgtgctatgtttagggaactcctt----gcggt-gggagtcttgatgggcctcgctgccactaagagaactcca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413581 84 - 192460366 TGGGGGTCGAATCTCCGTGCTATGTTTAGGGAACTCCTT----GCGGT-AGGAGTCTTGATGGGCCTCGCTGCCACTAAGAGAACTCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152866 84 - 19675229 cgggggtcgaatctccgtgctatgtttagggaactcctt----gcggt-gggagtcttgatgggcctcgctgccactaagagaactcca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389883 84 - 16847902 cgggggtcgagtctccgtgctatgtttagggaactcctt----gcggt-gggagtcttgatgggcctcgctgccactaagagaactcca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359825 84 + 91754291 CGGGGGTCGAATCTCCGTGCTATGTTTAGGGAACTCCTT----GCGGT-GGGAGTCTTGATGGGCCTCGCTGCCACTAAGAGAACTCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1428006 84 + 1977891 CGGGGGTCGAATCTCCGTGCTATGTTTAGGGAACTCCTT----GCGGT-GGGAGTCTTGATGGGCCTCGCTGCCACTAAGAGAACTCCA i manLeu1.NW_012102020v1 C 0 T 1699 s colAng1.NW_012118932v1 7365659 81 - 7796314 CAGATGTTGAATCTCTGTGCTATGTTTAG---ACTCCTT----GCGGT-GGGAGTCTTGATGGGCCTCGCTGCCACTAAGGGAACTCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839709 88 + 74750902 CTGGCATCAAACCCCCATGCCATGTTCAGGGAGCTCCTCCATGACAGT-GGGAGTTATGATGGGCCTCGCTGCCACGGAGAGAACGTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17286296 72 - 17725628 GTGGCATCAAATCCCCGTGCCGTGTTCAGGGAACCCCTC----ACAGT-GGGAG------------TCGTTGCCATTGAGAGAACGTCA i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 13962 84 + 69927 CTGGCACCAAATCCCCATGCCACGTTCAGGGGACTCCTC----ACAGT-GGGAGTCGTGATGGGCCGTGCTGCCACTGAGAGACCGTCA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 207442 83 + 608964 cccacatcaaatccc--tgtcacatttagagaaatccct----atttcaaggaatccttgcaggcctctctacccctaaaagagctgca i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32787113 74 + 98207768 -------CAAACGTTGATGCTCTATGGACAGGAATCCTC----AGGAA-GAAGGTCA--GTGAGCCTCCCTTGTTACCAGAGAGTCTG- i mm10.chr16 C 0 C 0 s canFam3.chr33 2322625 83 - 31377067 CACTTTCAAAGCCGCCATGCGGCGTTCAGGGCGCTTCTT----ACTAT-GGGAGTCCCGACGGGCCCCTTT-CCACTAAGAGAACTTCA i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2701838 83 - 6579706 -ccatatcaaaactccatcccatgtttaggaaattcctc----atttt-gggagtcctgttgggcgtccctaccaccaggagaacttca i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14794862 235 - 22200726 I e micMur3.chr1 88388878 311 + 114275543 I e cebCap1.NW_016107444v1 6375631 141 + 6778120 I a score=141692.000000 s hg38.chr3_KI270934v1_alt 62892 18 + 163458 AGGACGCAGA-----CATCCCTT s panTro5.chr3 2535092 18 - 202621043 aggacgcaga-----catccctt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125178 18 - 190779 aggacgcaga-----catccctt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76195 18 - 106623 AGGATGCAGA-----CATCCCTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851874 18 - 123690457 AGGACACAGA-----TATCCCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348497 18 - 204787373 aggatgcaga-----tatccctt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413665 18 - 192460366 AGGATGCAGA-----TATCCCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152950 18 - 19675229 aggatgcaga-----tatccctt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389967 18 - 16847902 aggatgcaga-----tatccctt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359909 18 + 91754291 AGGATGCAGA-----TATCCCTT i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7365740 18 - 7796314 GGGATGCAGA-----TATCCCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839797 18 + 74750902 GGGATGCCCA-----TATCCCCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17286368 16 - 17725628 AGGACGCAGA-----TAACCC-- i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 14046 18 + 69927 AGGATGCAGA-----CATCCCCT i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 207525 18 + 608964 aggatccaga-----tattccct i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32787187 23 + 98207768 GAAAGCCAGAATATTTATTCCCT i mm10.chr16 C 0 C 0 s canFam3.chr33 2322708 18 - 31377067 AGGGCCCGGT-----TATTCCCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2701921 16 - 6579706 gagattcaga-----gaatct-- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14794862 235 - 22200726 I e micMur3.chr1 88388878 311 + 114275543 I e cebCap1.NW_016107444v1 6375631 141 + 6778120 I e manLeu1.NW_012102020v1 1428090 1699 + 1977891 T a score=228980.000000 s hg38.chr3_KI270934v1_alt 62910 33 + 163458 CTTCCCGTCCCCTGGCACCTGGCTGTGGGCTCA s panTro5.chr3 2535110 33 - 202621043 cttcccgtcccctggcacctggctgggggctca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125196 33 - 190779 cttcccgtcccctggcacctggctgggggctca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76213 33 - 106623 CTTCCCGTCCCCTGGCACCTGGCTGGGGGCTCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851892 33 - 123690457 CTTCCCATCCCCTGGCACCTGGCTGTGGGCTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348515 33 - 204787373 cttcccatcccctggcacctggctgtggactca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413683 33 - 192460366 CTTCCCATCCCCTGGCACCTGGCTGTGGACTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19152968 33 - 19675229 cttcccatcccctggcacctggctgtggactca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16389985 33 - 16847902 cttgccatcccctggcacctggctgtggactca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359927 30 + 91754291 CTTCCCATCCCCTGGCAC---GCTGTGGACTCA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7365758 32 - 7796314 CTTCCCAT-CCCTGGCACCTGGCTGTGGACTGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839815 32 + 74750902 CTTCCCAGCCCCTGGCAACTGGGTGTGCACT-A i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17286384 32 - 17725628 TTTCCCATCCCCTGAGAACTAGGTGTGTGCT-G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6375772 32 + 6778120 CTTCCCATCCCCTGGCAACTAGGTGTGTGCT-A i cebCap1.NW_016107444v1 I 141 C 0 s aotNan1.NW_018503669v1 14064 32 + 69927 CTTTCCATCCCCCGGCAACTAGGTGTGTGCT-G i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 207543 23 + 608964 cttcccatcccctg----------gtggggaga i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32787210 17 + 98207768 CTTAATATCCCTGGGTA---------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2322726 33 - 31377067 CTTCTCATCCCCTGGCAGCAAGATGTGGCCACA i canFam3.chr33 C 0 I 8 s dasNov3.JH569502 2701937 20 - 6579706 ctccccttcac----------ggtggggtc--- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14794862 235 - 22200726 I e micMur3.chr1 88388878 311 + 114275543 I e manLeu1.NW_012102020v1 1428090 1699 + 1977891 T a score=399865.000000 s hg38.chr3_KI270934v1_alt 62943 38 + 163458 TGGGAGTACAAGGGCTAAGCTCGGCCTATCAAATGTTC s panTro5.chr3 2535143 38 - 202621043 tgggagtacaagggctaagctcggcctatcaaatgttc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125229 38 - 190779 tgggagtacaagggctaagctcggcctatcaaatgttc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76246 38 - 106623 TGGGAGTACAAGGGCTAAGCTTGGCCTATCAAATGTTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851925 38 - 123690457 AGGGAGTATAAGGGCTAAGCTCGGCCTATCGAATGTTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348548 38 - 204787373 cgggagcacaagggctaagctcggcctatcaaatgttc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413716 38 - 192460366 CGGGAGCACAAGGGCTAAGCTCGGCCTATCAAATGTTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153001 38 - 19675229 cgggagcacaagggctaagctcggcctatcaaatgttc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390018 38 - 16847902 cgggagcacaagggctaagctcggcctatcagatgttc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359957 38 + 91754291 CGGGAGCACAAGGGCTAAGCTCGGCCTATCAAATGTTC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7365790 38 - 7796314 CGGGAGCACAAGGGCTGAGCTCAGCCTATCAAATGTTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839847 38 + 74750902 TGGGAGCACAAGAGCTAAGCTCAGCCTATCGAATATTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17286416 37 - 17725628 TGGGAGCAC-AGAGCTAAGCTCCGCCTATCGAATGTTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6375804 38 + 6778120 CGGGGGCACAAGAGCTAAGCTCAGCCTATCGGATGTTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 14096 38 + 69927 TGGGAGCACAAGAGCTAAGCTCAGCCTGTCGAACGTTC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 207566 38 + 608964 tgtgggcacaaaagctaagcttagcttatcatatgttc i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32787227 36 + 98207768 --GTGGTACAAGAGCCAAACATGGCTGATTGGACGCTC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2701957 36 - 6579706 --tgggtgtaacaaccaggctcagctcactaaatgttc i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14794862 235 - 22200726 I e micMur3.chr1 88388878 311 + 114275543 I e canFam3.chr33 2322759 8 - 31377067 I e manLeu1.NW_012102020v1 1428090 1699 + 1977891 T a score=264165.000000 s hg38.chr3_KI270934v1_alt 62981 21 + 163458 -CTACTCAGGACTTTGGCTCTG s panTro5.chr3 2535181 21 - 202621043 -ctactcaggactttggctctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125267 21 - 190779 -ctactcaggactttggctctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76284 21 - 106623 -CTACTCAGGACTTTGGCTCTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851963 21 - 123690457 -CTACTCAGGACTTTGGCTCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348586 21 - 204787373 -ctactcaggactttggctctg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413754 21 - 192460366 -CTACTCAGGACTTTGGCTCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153039 21 - 19675229 -ctactcaggactttggctctg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390056 21 - 16847902 -ctactcaggactttggctctg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91359995 21 + 91754291 -CTACTCAGGACTTTGGCTCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1426391 21 + 1977891 -CTACTCAGGACTTTGGCTCTG i manLeu1.NW_012102020v1 T 1699 C 0 s colAng1.NW_012118932v1 7365828 21 - 7796314 -CTACTCAGGACTTTGGCTCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839885 19 + 74750902 -CCACTCAGGAC--TGGCTCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17286453 21 - 17725628 -CCACTCAGGACTGTGGTTCTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6375842 21 + 6778120 -CCACTCAGGACTGCGGCTCTG i cebCap1.NW_016107444v1 C 0 I 953 s aotNan1.NW_018503669v1 14134 21 + 69927 -CCACTCAGGACTGTGGCTCTG i aotNan1.NW_018503669v1 C 0 I 192 s otoGar3.GL873829 207604 16 + 608964 -ccactcaggattttgg----- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32787263 21 + 98207768 -CTGCTCAGAGCTTTGGCCCTG i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2701993 22 - 6579706 ccagcccggtactttgactctg i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14794862 235 - 22200726 I e micMur3.chr1 88388878 311 + 114275543 I e canFam3.chr33 2322759 8 - 31377067 I a score=343241.000000 s hg38.chr3_KI270934v1_alt 63002 48 + 163458 GAGCAAAAAGTCCAGTGAGACAAAAAGGCAGCGAGAACCTA--TGTGAAT-- s panTro5.chr3 2535202 48 - 202621043 gagcaaaaagtccagtgagacaaaaaggcagCGAGAACCTA--TGTGAAT-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125288 48 - 190779 gagcaaaaagtccagtgagacaaaaaggcagCGAGAACCTA--TGTGAAT-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76305 48 - 106623 GAGCAAAAAGTCCAGTGAGACAAAAAGGCAGCGAGAACCTA--TGTGAAT-- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2851984 48 - 123690457 GAGCAAAAAGTCCAGCGAGACAAAAAGGCAGCGAGAACCTG--TGTGAAC-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348607 48 - 204787373 tagcaaaaagtccagcgagacaaaaaggcagCGAGAACCCG--TGTGAAC-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413775 48 - 192460366 GAGCAAAAAGTCCAGCGAGACAAAAAGGCAGCGAGAACCCG--TGTGAAC-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153060 48 - 19675229 gagcAAAAAGTCCAGCGAGACAAAAAGGCAGCGAGAACCCG--TGTGAAC-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390077 48 - 16847902 gagcAAAAAGTCCAGCGAGACAAAAAGGCAGCGAGAACCTG--TGTGAAC-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360016 48 + 91754291 GAGCAAAAAGTCCAGCAAGACAAAAAGGCAGCGAGAACCCG--TGTGAAC-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1426412 48 + 1977891 GAGCAAAAAGTCCAGCGAGACAAAAAGGCAGCGAGAACCCG--TGTGAAC-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7365849 48 - 7796314 GAGCAAAAAGTCCAGCGAGACAAAAAGGCAGCGGGAACCCG--TGTGAAC-- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839904 44 + 74750902 --ACAGGTGACCC--CGAGACAAAAAGGCAGCAAGAACCCA--TGTGAAA-- i calJac3.chr17 C 0 I 2 s saiBol1.JH378146 17286474 43 - 17725628 --ACAGGTGACCC--CGAGACAAAAAGGCAG-AAGAACCCA--TGTGAAA-- i saiBol1.JH378146 C 0 I 1 s otoGar3.GL873829 207620 46 + 608964 -aacaggtgactcagtgaca-aaaaaggcaCTGAGAACTGA--TATGCAA-- i otoGar3.GL873829 C 0 I 2 s mm10.chr16 32787284 48 + 98207768 CAACCAGCAGCCCA--AAGACGATGTCCCAGTGGGAACCCACTTGTGACG-- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2702015 39 - 6579706 aaagaagtaaccca--aagacaaagggg---------ccCA--TTTGTAACA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14794862 235 - 22200726 I e aotNan1.NW_018503669v1 14155 192 + 69927 I e micMur3.chr1 88388878 311 + 114275543 I e cebCap1.NW_016107444v1 6375863 953 + 6778120 I e canFam3.chr33 2322759 8 - 31377067 I a score=235940.000000 s hg38.chr3_KI270934v1_alt 63050 25 + 163458 GTGTGTGCAGGCCACGTGATGCCCC s panTro5.chr3 2535250 25 - 202621043 GTGTGTGCAGGCCGCGTGATGCCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125336 25 - 190779 GTGTGTGCAGGCTGCGTGATGCCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76353 25 - 106623 GTGTGTGCAGGCCACGTGATGCCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852032 25 - 123690457 GTGTGCGCAGGCTGCGTGATGCCCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348655 25 - 204787373 GTGTGCGCAGGCCGCATGACGCCCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413823 25 - 192460366 GTGTGCGCAGGCCGCATGACGCCCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153108 25 - 19675229 GTGTGCGCAGGCCGCATGACGCCCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390125 25 - 16847902 GTGTGCACAGGCCGCAGGACGCCCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360064 25 + 91754291 GTGTGCGCAGGCCGCATGACGGCCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1426460 25 + 1977891 GTGTGCGCAGGCCGCATGACGCCCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7365897 25 - 7796314 GTGTGCGCAGGCCGCACACCGCCCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839950 25 + 74750902 GTGTGCATGGGCAGCATGATGCCCG i calJac3.chr17 I 2 C 0 s saiBol1.JH378146 17286518 25 - 17725628 GTGTGCGTAGGCAGCATGAGGCCCA i saiBol1.JH378146 I 1 C 0 s proCoq1.NW_012133858v1 14795097 25 - 22200726 GTGTGTTCAGGCAGCATGATGCACA i proCoq1.NW_012133858v1 I 235 C 0 s otoGar3.GL873829 207668 25 + 608964 GTGTGTTCAGGCAGCATGATGCACA i otoGar3.GL873829 I 2 C 0 s mm10.chr16 32787332 25 + 98207768 GCACATGGAGGAAGCACGACATCCA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2702054 25 - 6579706 GTGTGTACAGGCAGCACAATGCCCA i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 14155 192 + 69927 I e micMur3.chr1 88388878 311 + 114275543 I e cebCap1.NW_016107444v1 6375863 953 + 6778120 I e canFam3.chr33 2322759 8 - 31377067 I a score=317335.000000 s hg38.chr3_KI270934v1_alt 63075 26 + 163458 TTGGCTGTGGCAGCATCCAATAGTGA s panTro5.chr3 2535275 26 - 202621043 TTGGCTGTGGCAGCATCCAATAGTGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125361 26 - 190779 TTGGCTGTGGCAGCATCCAATAGTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76378 26 - 106623 TTGGCTGTGGCAGCATCCAATAGTGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852057 26 - 123690457 TTGGCTGTGACGGCATCCAATAGTGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348680 26 - 204787373 TCGGCTGTGGCAGCGTCCAGTAGTGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413848 26 - 192460366 TCGGCTGTGGCAGCGTCCAGTAGTGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153133 26 - 19675229 TCGGCTGTGGCAGCGTCCAGTAGTGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390150 26 - 16847902 TCGGCTGTGGCAGCGTCCAGTAGTGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360089 26 + 91754291 TCGGCTGTGGCAGCGTCCAGTAGTGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1426485 26 + 1977891 TCGGCTGTGGCAGCGTCCAGTAGTGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7365922 26 - 7796314 TCGGCTGTGGCAGCATCCAATAGTGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73839975 26 + 74750902 TCAGCTGTGGCAGCATCCAATAGTGA i calJac3.chr17 C 0 I 800 s saiBol1.JH378146 17286543 26 - 17725628 TCAGCTGTGGCAGCATCCAATAGTGA i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 88389189 26 + 114275543 TTGGCTGTGGCAGCATCCAATAGTGA i micMur3.chr1 I 311 C 0 s proCoq1.NW_012133858v1 14795122 26 - 22200726 TTGGCTGTGGCAGCATCCAATAGTGA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 207693 26 + 608964 TGGGCTGTGGCAGCATCCAATATTGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32787357 10 + 98207768 ----------------CGGACAGTGC i mm10.chr16 C 0 I 1 s dasNov3.JH569502 2702079 26 - 6579706 GTGGCCATGGCCGCATCCAGTAGCAA i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 14155 192 + 69927 I e cebCap1.NW_016107444v1 6375863 953 + 6778120 I e canFam3.chr33 2322759 8 - 31377067 I a score=17100.000000 s hg38.chr3_KI270934v1_alt 63101 1 + 163458 C s panTro5.chr3 2535301 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125387 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76404 1 - 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852083 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348706 1 - 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413874 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153159 1 - 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390176 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360115 1 + 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1426511 1 + 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7365948 1 - 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73840801 1 + 74750902 C i calJac3.chr17 I 800 C 0 s saiBol1.JH378146 17286569 1 - 17725628 C i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 14347 1 + 69927 C i aotNan1.NW_018503669v1 I 192 C 0 s micMur3.chr1 88389215 1 + 114275543 C i micMur3.chr1 C 0 I 34 s proCoq1.NW_012133858v1 14795148 1 - 22200726 C i proCoq1.NW_012133858v1 C 0 I 33 s otoGar3.GL873829 207719 1 + 608964 C i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2702105 1 - 6579706 C i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32787367 1 + 98207768 I e cebCap1.NW_016107444v1 6375863 953 + 6778120 I e canFam3.chr33 2322759 8 - 31377067 I a score=38926.000000 s hg38.chr3_KI270934v1_alt 63102 6 + 163458 TGACCA s panTro5.chr3 2535302 6 - 202621043 TGACCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125388 6 - 190779 TGACCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76405 6 - 106623 TGACCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852084 6 - 123690457 TGACCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348707 6 - 204787373 TCACCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413875 6 - 192460366 TCACCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153160 6 - 19675229 TCACCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390177 6 - 16847902 TCACCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360116 6 + 91754291 TCACCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1426512 6 + 1977891 TCACCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7365949 6 - 7796314 TCACCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73840802 6 + 74750902 TGACCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17286570 6 - 17725628 CGACCA i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 14348 6 + 69927 TGACTG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 207720 1 + 608964 -----A i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32787368 2 + 98207768 ----CG i mm10.chr16 I 1 C 0 s dasNov3.JH569502 2702106 4 - 6579706 --AGCG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795149 33 - 22200726 I e micMur3.chr1 88389216 34 + 114275543 I e cebCap1.NW_016107444v1 6375863 953 + 6778120 I e canFam3.chr33 2322759 8 - 31377067 I a score=386990.000000 s hg38.chr3_KI270934v1_alt 63108 44 + 163458 GCAAGAGG--GACAGTGTCCCAGCCAGCCTGATCCCACTGTCTGG----------------------------------------------A s panTro5.chr3 2535308 44 - 202621043 GCAAGAGG--GACAGTGTCCCAGCCAGCCTGATCCCACCGTCTGG----------------------------------------------C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125394 44 - 190779 GCAAGAGG--GACAGTGTCCCAGCCAGCCTGATCCCACCGTCTGG----------------------------------------------C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76411 44 - 106623 GCAAGAGG--GACAGTGTCCCAGCCAGCCTGATCCCACTCTCTGG----------------------------------------------C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852090 44 - 123690457 GCAAGAGG--GACAGTGTCCCAGCCAGCGTGATCCCATTGTCTGG----------------------------------------------C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348713 44 - 204787373 GCAAGAGG--GACCGTGTCCCAGCCAGCGTGGTCCCACTGTCTGG----------------------------------------------C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413881 44 - 192460366 GCAAGAGG--GACCGTGTCCCAGCCAGCGTGGTCCCACTGTCTGG----------------------------------------------C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153166 43 - 19675229 GCAAGAGG--GACCGTGTCCCAGCCAGTGT-GTCCCACTGTCTGG----------------------------------------------C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390183 44 - 16847902 GCAAGAGG--GACCGTGTCCCAGCCAGCGTGGTCCCACTGTCTGG----------------------------------------------C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360122 43 + 91754291 GCAAGAGG--GACCGTGTCCCAGCCAGCGTGACCCCACTGTCTGG----------------------------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1426518 44 + 1977891 GCAAGAGG--GACCGTGTCCCAGCCAGCGTGGTCCCACTGTCTGG----------------------------------------------C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7365955 44 - 7796314 GCAGGAGG--GACAGTGTCCCAGCCAGCGTGACCCCACTGTCTGG----------------------------------------------C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73840808 43 + 74750902 GCAAGAGT--GACCGTGTCCCAGCCAGCGTGTTCCCGCTGTCTGG----------------------------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17286576 90 - 17725628 ACAAGAGC--GACCCTGTCCCAGCCAGGGTGTTCCCGCCATCTGACCGGCAAGAGCGACCATGTCCCAGCCCGTATGTTCCCACCGTCTGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6376816 43 + 6778120 GCAAGAGC--GACCGTGTCCCAGCCAGCGTGCTCCCACCGTCTGA----------------------------------------------- i cebCap1.NW_016107444v1 I 953 C 0 s aotNan1.NW_018503669v1 14354 44 + 69927 GCAAGAGC--GACCGTGTCCCAGCCAGTCTGTTCCCACCATCTGG----------------------------------------------C i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 207722 30 + 608964 ----------------GTCCCAACCAGAATGTTCCCACTATCCAA----------------------------------------------T i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32787370 27 + 98207768 GCAAGAG---GACAGTGTCCTAGGAAGCAT-------------------------------------------------------------- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2702110 46 - 6579706 GCTAGCAGCTGATTGGGTTCTAGCCAGAATGTTTCCACTGCCTAG----------------------------------------------T i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795149 33 - 22200726 I e micMur3.chr1 88389216 34 + 114275543 I e canFam3.chr33 2322759 8 - 31377067 I a score=17100.000000 s hg38.chr3_KI270934v1_alt 63152 1 + 163458 C s panTro5.chr3 2535352 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125438 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76455 1 - 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852134 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348757 1 - 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413925 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153209 1 - 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390227 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360165 1 + 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1426562 1 + 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7365999 1 - 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73840851 1 + 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17286666 1 - 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6376859 1 + 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 14398 1 + 69927 C i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14795182 1 - 22200726 C i proCoq1.NW_012133858v1 I 33 C 0 s otoGar3.GL873829 207752 1 + 608964 C i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2702156 1 - 6579706 C i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32787397 0 + 98207768 C e micMur3.chr1 88389216 34 + 114275543 I e canFam3.chr33 2322759 8 - 31377067 I a score=1463756.000000 s hg38.chr3_KI270934v1_alt 63153 122 + 163458 -CCCAGAG----------CTCCTGGGG-----------GCCCTCCTGCCTATTTTCCAAGCCTGCTGTCCTGGCATTGCTTTGATTCTATGCACTCTGGGA-------------------------CGCTGCCAACAAATCCCCCTTTTACTTACGACAGACAGAGGTT s panTro5.chr3 2535353 122 - 202621043 -CCCAGAG----------CTCCTGGGG-----------GCCCTCCTGCCTATTTTCCAAGCCTGCTGTCCTGGCATTGCTTTGATTCTATGCACTCTGGGA-------------------------CACTGCCAACAAATCGCCCTTTTACTTACGACAGACAGAGGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125439 122 - 190779 -CCCAGAG----------CTCCTGGGG-----------GCCCTCCTGCCTATTTTCCAAGCCTGCTGTCCTGGCATTGCTTTGATTCTATGCACTCTGGGA-------------------------CACTGCCAACAAATTGCCCTTTTACTTACGACAGACAGAGGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76456 120 - 106623 -CCCAGAG----------CTCCT-GGG-----------GCCCTCCTGCCTATTTTCCAAGCCTGCTGTCCTGGCATTGCTTTGATTCTATGCAGTCTGGGA-------------------------CGCTGCCAACAAATC-CCCTTTTACTTACGACAGACAGAGGTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852135 122 - 123690457 -CCCAGAG----------CCCCTGGGG-----------GCCCTCCTGCCTATTTTCCAAGCCTGCTCTCCTGGCATTGCTTTGATTCTATGCACTCTGGGA-------------------------CGCTGCCAGCAAATCCCCCTTTTACTTATGACAGACAGAGGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348758 131 - 204787373 -CCCAGAGCCCCCGCACTCCCCTGGGG-----------GTCCTCCTGCCTATGTTCCGAGCCTGCTGTCCTGGCATTGCTTTGATTCTATGCACTCTGGGA-------------------------C-CTGCCAACAAATCCCCCTTTTACTTATGACAGACAGAGGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192413926 131 - 192460366 -CCCAGAGCCCCCGCACTCCCCTGGGG-----------GTCCTCCTGCCTATGTTCCGAGCCTGCTGTCCTGGCATTGCTTTGATTCTATGCACTCTGGGA-------------------------C-CTGCCAACAAATCCCCCTTTTACTTATGACAGACAGAGGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153210 129 - 19675229 -CCCAGAGCCCCCGCACTCCCCTGGGG-----------GTCCTCCTGCCTATGTTCCGAGCCTGCTGTCCTGGCATTGCTTTGATTCTATGCACTCTGGGA-------------------------C-CTGCCAACAAATCCCCCTTTTACTTATGACAGAC--AGGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390228 131 - 16847902 -CCCAGAGCCCCCGCACTCCCCTGGAG-----------GTCCTCCTGCCTATGTTCCGAGCCTGCTGTCCTGGCATTGCTTTGATTCTATGCACTCTGGGA-------------------------C-CTGCCAACAAGTCCCCCTTTTACTTACGACAGACAGAGGTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360166 131 + 91754291 -CCCAGAGCCCCCGCACTCCCCTGGGG-----------GTCCTCCTGCCTATGTTCCGAGCCTGCTGTCCTGGCATTGCTTTGATTCTATGCACTCTGGGA-------------------------C-CTGCCAACAAATCCCCCTTTTACTTATGACAGACAGAGGTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1426563 131 + 1977891 -CCCAGAGCCCCCGCACTCCCCTGGGG-----------GTCCTCCTGCCTATGTTCCGAGCCTGCTGTCCTGGCATTGCTTTGATTCTATGCACTCTGGGA-------------------------C-CTGCCAACAAATCCCCCTTTTACTTACGACAGACAGAGGTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7366000 154 - 7796314 -CCCAGAGCCCCTGCACTCCCCTGGGA-----------GTCCTCCTGCCTATTTTCCGAGCCTGC--TCCTGGCATTGCTTTGATTCTATGCACTCTGGGACCCTGCCAACAAATCCCCCTGGGACC-CTGCCAACAAATCCCCCTTTTACTTACGACAGACAGAGGTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73840852 120 + 74750902 -CCCAGAG----------CCCCTGGGG-----------GTTCTCCTGCCTATGTCCCAAGCCTGCTGTCCTGGCATTCCTTTGATTCTATGCACTC--AGA-------------------------CCCTGCCAACAAATCCCCCTTTTACTCATGACAGACAGAGGTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17286667 118 - 17725628 -CCCAGAG----------CCCCT-GGG-----------GTCCTGCTGCCT-TTCCCCAAGCCTGCTGTCCTGACATTCCTTTGATTCTGGGCACTC--AGA-------------------------CCCTGCCAGCAAATCCCCCTTTTACTCATGACAGACAGAGGTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6376860 116 + 6778120 -CCCAGAG----------CCCCT-GGG-----------GTCCTCCTGCC--TGTCCCAAGCCTGCTGCCCTGGCATTCCTCTGATTCTGCACACTC--AGA-------------------------CCCTGCCAACAAAT-CCCCTTTTACTCATGACAGACAGGGGTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 14399 120 + 69927 -CCCAGAG----------CCCCTGGGG-----------GTCCTCCTGCCTCTTTCCCAAGCCTGCCGTCCTGGCATCCCTTTGATTCTAGTCACTC--AGA-------------------------CCCTGCCAACAAATCCCCCTTTTACTCACGACAGACAGAGGTT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88389250 122 + 114275543 -CCCAGAG----------CCCCTTGGG-----------TTCCTCCTGCTTGTTTTCCCAGCCCACTCCGCTGGAATTCCTTTGATTCTGTGTACCATGGGA-------------------------CCCTGCCAATGAATGCCCCCTTTACTTAAGACAGTCAGCGGTT i micMur3.chr1 I 34 C 0 s proCoq1.NW_012133858v1 14795183 121 - 22200726 -CCCAGAG----------TCCCCGGGG-----------TTCCTCCTGCTTGTTTTTCAAGCCCACTCCTCTGGTATTCCTTTGATTCTATGTACCGTGGGA-------------------------CCCTGCCAATGACTGCCCCCTTTAC-TATGACAGTCAGTGGTT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 207753 122 + 608964 -CCCAGAG----------CCCCGTGGG-----------TTCCTCCTGCTTGTTTTTCAAGGCTGCTCTTCTGGAATTCCTTCGATTCTGGGTACCATGGGA-------------------------CCCTGCCAATGTATGCCCCTTTTACTTATGACAGCAAGTGATT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32787397 92 + 98207768 --------------------------------------GTCTTTATGCTTGT----CAAAGCTGCTCTTCTGCCATTCCTTTGCTTCTGTGCA-TCTGGGG-------------------------TTCT---------CTCTCCCCTTGTTTGCAAAGCAAAGAGCTT i mm10.chr16 C 0 I 440 s dasNov3.JH569502 2702157 130 - 6579706 TCCAGGTG----------CCCCTGGGTTCCTTCAGCCCTTCCTCCCACCTGTTTTTCAAGCCTGCTCCTCTAGTAATCCTTTGATTCTATGCACCCTTGCA-------------------------C-CTTGCAACAAACCCCTCTTTCACTTGTTATAGCCAGGC--- i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 2322759 8 - 31377067 I a score=2728395.000000 s hg38.chr3_KI270934v1_alt 63275 215 + 163458 TTCTTTCGCCTGCAACAAAGGATCCCACTCTCCACGGACATATCTTGCTTCCCTCTGCTAAGGGCAATCATTC-CACCTGTCCAGCCTGGCTAT-GAACTCTA-CACCTGGCATAAGACCCCC------------AGCCAGCATCTCTGCCAGGTTT-ACCCTTGCAAGGGATGACAGGAAGCCTGAGCCACTTTTCAGCAGTGTGGCACCCATTGACTGTGAGAGGTGCT s panTro5.chr3 2535475 215 - 202621043 TTCTTTCGCCTGCAACAAAGGATCCCACTCTCCACGGACATATCTTGCTTCCCTCTGCTAAGGGCAATCAGTC-CACCTGTCCAGCCTGGCTAT-GAACTCTA-CACCTGGCATAAGTCCCCC------------AGCCAGCATCTCTGCCAGGTTT-ACCCTTGCAAGGGATGACAGGAAGCCTGAGCCACTTTTCAGCAGTGTGGCACCCATTGACTGTGAGAGGTGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125561 215 - 190779 TTCTTTCGCCTGCAACAAAGGATCCCACTCTCCACGGACATATCTTGCTTCCCTCTGCTAAGGGCAATCAGTC-CACCTGTCCAGCCTGGCTAT-GAACTCTA-CACCTGGCATAAGTCCCCC------------AGCCAGCATCTCTGCCAGGTTT-ACCCTTGCAAGGGATGACAGGAAGCCTGAGCCACTTTTCAGCAGTGTGGCACCCATTGACTGTGAGAGGTGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76576 215 - 106623 TTCTTTCACCTGCAACAAAGGATCCCACTCTCCACGGACATATCTTGCTTCCCTCTGCTAAGGGCAATCATTC-CACCTGTCCAGCCTGGCTAT-GAACTCTA-CACCTGGCATAAAACCCCC------------AGCCAGCATCTCTGCCAGGTTT-ACCCTTGCAAGGGATGACAGGAGGCCTGAGCCACTTTTCAGCAGTGTGGCACCCATTGACTGTGAGAGGTGCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852257 215 - 123690457 TTCTTTCGCCTGCAACAAAGGAGCCCACTCTCCACGGACATATCTTGCTTCCGTCTGCTAAGGGCAATCACTC-CACCTGTCTAGCCTGGCTGT-GAACCCTA-CACCTGGCATAAGACCCCC------------AGCCAGCATCTCTGCCAGGTTT-ACCCTTGCAAGGGATGACAGGAAGCCTGAGCCACTTTTAAGCGGTGCGGCACCCATTGACTCTGAGAGGTGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2348889 215 - 204787373 TTCTTTCGCCTGCAACAAAGGATCCCATTCTCCACAGATGTATCTTGCTTCCCTCTGCAAAGGGCAATCACTT-CACCTGTCCAGCCCAGCTAT-GAACTCTA-CACCTGGCATGAGACCCCC------------AGCCAGCATCTCTGCCAGGTTT-ACCCTTGCAAGGGATGACAATAAGCCTGAGCCACTTTTAAGTGGTACGGCCCCCATTGACTGTGAGAGGTGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414057 215 - 192460366 TTCTTTCGCCTGCAACAAAGGATCCCATTCTCCACAGACGTATCTTGCTTCCCTCTGCAAAGGGCAATCACTT-CACCTGTCCAGCCCGGCTAT-GAACTCTA-CACCTGGCATGAGACCCCC------------AGCCAGCATCTCTGCCAGGTTT-ACCCTTGCAAGGGATGACAATAAGCCTGAGCCACTTTTAAGTGGTACGGCCCCCATTGACTGTGAGAGGTGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153339 215 - 19675229 TTCTTTCGCCTGCAACAAAGGATCCCATTCTCCACAGACGTATCTTGCTTCCCTCTGCAAAGGGCAATCACTT-CACCTGTCCAGCCCGGCTAT-GAACTCTA-CACCTGGCATAAGACCCCC------------AGCCAGCATCTCTGCCAGGTTT-ACCCTTGCAAGGGATGACAATAAGCCTCAGCCACTTTTAAGTGGTACGGCACCCATTGACTGTGAGAGGTGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390359 215 - 16847902 TTCTTTCGCCTGCAACAAAGGATCCCATTCTCCACAGACGTATCTTGCTTCCCTCTGCAAAGGGCAATCACTT-CACCTGTCCAGCCCGGCTAT-GAACTCTA-CACCTGGCATAAGACCCCC------------AGCCAGCATCTCTGCCAGGTTT-GCCCTTGCAAGGGATGACAATAAGCCTGAGCCACGTTTAAGTGGTACGGCCCCCATTGACTGTGAGAGGTGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360297 215 + 91754291 TTCTTTCACCTGCAACGAAGGATCCCACTCTCCACGGACGTATCTTGCTTCCCTCTGCAAAGGGCAATCACTT-CACCTGTCCAGCCCGGCTAT-GAACTCTA-CACCTGGCATAAGACCCCC------------AGCCAGCATCTCTGCCAGGTTT-ACCCTTGCAAGGGATGACAATAAGTCTGAGCCACTTTTAAGTGGTACGGTACCTATTGACTGTGAGAGGTGCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1426694 215 + 1977891 TTCTTTCGCCTGCAACAAAGGATCCCATTCTCCACGGACGTATCTTGCTTCCCTCTGCAAAGGGCAATCACTT-CACCTGTCCAGCCCGGCTAT-GAACTCTA-CACCTGGCGTAAGACCCCC------------AGCCAGCATCTCTGCCAGGTTT-ACCCTTGCAAGGGATGACAATAAGCCTGAGCCACGTTTAAGTGGTACGGCCCCCATTGACTGTGAGAGGTGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7366154 216 - 7796314 TTCTTTTGCCTGCAACAAAGGATCCCACTCTCCACGGACGTATCTTGCTTCCCTCTGCAAAGGGCAATCACTTCCACCTGTCCAGCCCGGCTAT-GAACTCTA-CACCTGGCATAAGACCCCC------------AGCCAGGATCTCTGCCAGGTTT-ACCCTTGCAAGGGATGACAGTAAGTCTGAGCCACTTTTAAGTGGTACGGCCCCCATTGACTGTGAGAGGTGCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73840972 201 + 74750902 TTCCTTTGCCTGCAACAATGGGTCCCACTCTCAACGGACATATCTTGCTTCTGTCTGCTAAGGGCAATCATTT-CA-CTGTCCAGCCTGGCTAT-GAATTCTG-CACCTGGCATAAGACCCCC------------CCACAATATCTCTGCCAGGATT-ACCCTTGCAAGGGATGACAGTAAGCCTGAGCCACTGATAAGCACTGTAGCACCCATGGAC------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17286785 211 - 17725628 TTCTTTTGCCTGCAGCAAAGGGTCCCACTCTGAATGGACATACCTTGCTTCTGCCTGCTAAGGGCGATCGTTT-CA-CTGTCCAGCCTGGCTAT-GAACTCTG-CACCTGGCATAAGACCCCCCCCCCGCCACTGCCCCAGCATCTCTGCTAGGGTT-TCC--TGCAAAGGATGGCAGTAAGGCTGAGCCACTGATAAGCAGTGTGGCACCCATGGAC------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6376976 192 + 6778120 TTCTTTTGCCTGCAGCAAAGGGTCCCACTCTCCATGGACAGATCTTGCTTCTGTCTGCTAAGGGCAATCATTT-CA-CTGTCCAGCCTGGCTAA-GACCT-----------------------------------CCCCAGCATCTCTGCCAGGGTT-ACCCTTGCAAGGGATGACAGTAAGCCTGAGCCACTGATAAGCCGTGTGGCAGCCACGGACTGTGAGAGGTGCT i cebCap1.NW_016107444v1 C 0 I 156 s aotNan1.NW_018503669v1 14519 211 + 69927 TTC-TTTGCCTACCACAAAGGGTCCCACTCTCAATGGACGTATCTTGCTTCTGTCTGCTAAGAGCAATCATTT-CA-CTGTCCAGCCTGGCTAT-GAGCTCTG-CACCTGGCATAAGACTC--------------CCCCAGCATCTGTGCCAGGGTT-ACCCTTGCAAGGGATGACAGTAAGCCTGAGCCACTGATAAGTAGTGTGGCACCCATGGACTGTGAGAGGTGCT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88389372 215 + 114275543 TTCTTTTGCCTACAACAAAGGATCCCACTTGCAATGGATATGTCCTGCTTCCATCTGCTAAGGGTAGTCATCT-CATCTGTCCAGCCTGGTTGT-GGACTCTA-CCCCTGGCATAAGACCCCC------------AGCCAGCACCTCTGCCAGGTTT-ATCCTTACAAGGGGTGACACCAAGCCTGAGCCACTGATAAGCTGTGTGGCACCCACTGACTATGAGAGGCGCC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14795304 194 - 22200726 TTCTTTTGCCTGCAACAAAGGATCCCACTTGCAATGGATATATCCTGGTTCCATCTGCTAAGGGTAGTCATCT-CATCTGTCCAGCCTGGCTGT-GGACTTTACCCCCTGGCATAAGACTCCC------------AGGTAGCACCTCTGCCAGGTTT-ATCCTTACAAGGGGTGACACCAAGCCTGAGCCACTGATAAGCTGCATGGCA---------------------- i proCoq1.NW_012133858v1 C 0 I 2 s otoGar3.GL873829 207875 214 + 608964 TTCTTTTGCCTGCCACAAAGGATCCCACTTGCAATGGCTACATCCTGCTTCCATCTGCTAAGGGTAGGCATCT-CATCTGTCCAGCTTGGTTGT-GGACT-TA-CCCTTGGCCCTCGACCCCC------------AGCCAGCACCTCTGCTAGGCTT-ATCCTTACAAGCAGTGACACCCGGCCTGAGCCACAGGTAAGCTGTGTGGTACCCATTGACTGTGAAAGGTGCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32787929 204 + 98207768 TTCTTTTGCATTCACCGAGGGATCCTTCTGGCAGGGATAACAGCAACTTCCGCTCTG-TAAGGGCAACCACCT-CACCTGTCTATTCTGGCAGCAGGACTGTA-CCCCTAACAGAAG-CTGCT------------GGTCTGCCCCTCGTCAGGGTCT-ATTCCTTTACTAGGTggcatggagcatgaacta----------atgtgactctcactgactatggaaggtgct i mm10.chr16 I 440 C 0 s dasNov3.JH569502 2702287 177 - 6579706 TTGTTTTGTCTGCAACAAAGT-TCCTACTTGCAATGGATACACCCTGCCTCCATTTGCTAAGGGTAACCACCT-CACCTCTCCAGCCAGGCTCCAGGACTCTA-CCCCTGGCATAAGACCCC-------------AACCAGCATCTCTGACAGGTTTAATCCTTGCAAGAGATGACACCAATCCAGAGCCCCT-------------------------------------- i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 2322759 8 - 31377067 I a score=-3568.000000 s hg38.chr3_KI270934v1_alt 63490 30 + 163458 GAATGCAAGCTTCAGGTATTAGCAAGGGCA s panTro5.chr3 2535690 30 - 202621043 GAATGCAAGCTTCAGGTATTAGCAAGGGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125776 30 - 190779 GAATGCAAGCTTCAGGTATTAGCAAGGGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76791 6 - 106623 GAATGC------------------------ i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852472 6 - 123690457 AAATGC------------------------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349104 6 - 204787373 AAATGC------------------------ i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414272 6 - 192460366 AAATGC------------------------ i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153554 6 - 19675229 AAATGC------------------------ i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390574 6 - 16847902 AAATGC------------------------ i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360512 6 + 91754291 AAATGC------------------------ i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1426909 6 + 1977891 AAATGC------------------------ i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7366370 6 - 7796314 AAATGC------------------------ i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018503669v1 14730 30 + 69927 AAATGCAAGCTCCGGGTACCGGCAAGGGCA i aotNan1.NW_018503669v1 C 0 I 201 s micMur3.chr1 88389587 30 + 114275543 AAATGCAAGCTTGAAGTGTTGGCAGGGGCA i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 208089 30 + 608964 AGATGCAAGCTTGAGGTGTTGGCAGGGGCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32788133 5 + 98207768 ggctg------------------------- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2702464 7 - 6579706 --------------------GGCAAGA--- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795498 2 - 22200726 I e saiBol1.JH378146 17286996 0 - 17725628 C e calJac3.chr17 73841173 0 + 74750902 C e cebCap1.NW_016107444v1 6377168 156 + 6778120 I e canFam3.chr33 2322759 8 - 31377067 I a score=1910.000000 s hg38.chr3_KI270934v1_alt 63520 2 + 163458 CT s panTro5.chr3 2535720 2 - 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125806 2 - 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s micMur3.chr1 88389617 2 + 114275543 CT i micMur3.chr1 C 0 I 15 s otoGar3.GL873829 208119 2 + 608964 CT i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14795498 2 - 22200726 I e mm10.chr16 32788138 0 + 98207768 C e aotNan1.NW_018503669v1 14760 201 + 69927 I e dasNov3.JH569502 2702471 0 - 6579706 C e macNem1.NW_012014355v1 19153560 0 - 19675229 C e saiBol1.JH378146 17286996 0 - 17725628 C e calJac3.chr17 73841173 0 + 74750902 C e cebCap1.NW_016107444v1 6377168 156 + 6778120 I e canFam3.chr33 2322759 8 - 31377067 I e colAng1.NW_012118932v1 7366376 0 - 7796314 C e manLeu1.NW_012102020v1 1426915 0 + 1977891 C e chlSab2.chr15 91360518 0 + 91754291 C e cerAty1.NW_012004056v1 16390580 0 - 16847902 C e macFas5.chr2 192414278 0 - 192460366 C e rheMac8.chr2 2349110 0 - 204787373 C e nomLeu3.chr11 2852478 0 - 123690457 C e gorGor5.CYUI01000576v1 76797 0 - 106623 C a score=918.000000 s hg38.chr3_KI270934v1_alt 63522 4 + 163458 GTCC s panTro5.chr3 2535722 4 - 202621043 GTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125808 4 - 190779 GTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s otoGar3.GL873829 208121 2 + 608964 --GC i otoGar3.GL873829 C 0 T 54 e proCoq1.NW_012133858v1 14795498 2 - 22200726 I e mm10.chr16 32788138 0 + 98207768 C e aotNan1.NW_018503669v1 14760 201 + 69927 I e micMur3.chr1 88389619 15 + 114275543 I e dasNov3.JH569502 2702471 0 - 6579706 C e macNem1.NW_012014355v1 19153560 0 - 19675229 C e saiBol1.JH378146 17286996 0 - 17725628 C e calJac3.chr17 73841173 0 + 74750902 C e cebCap1.NW_016107444v1 6377168 156 + 6778120 I e canFam3.chr33 2322759 8 - 31377067 I e colAng1.NW_012118932v1 7366376 0 - 7796314 C e manLeu1.NW_012102020v1 1426915 0 + 1977891 C e chlSab2.chr15 91360518 0 + 91754291 C e cerAty1.NW_012004056v1 16390580 0 - 16847902 C e macFas5.chr2 192414278 0 - 192460366 C e rheMac8.chr2 2349110 0 - 204787373 C e nomLeu3.chr11 2852478 0 - 123690457 C e gorGor5.CYUI01000576v1 76797 0 - 106623 C a score=178927.000000 s hg38.chr3_KI270934v1_alt 63526 53 + 163458 CATTGACTGTGAGAGGTGCTGAATGC--------------------------------------------------------AAGCTTCAGGTATTAGCAAGGGCACTG-- s panTro5.chr3 2535726 53 - 202621043 CATTGACTGTGAGAGGTGCTGAATGC--------------------------------------------------------AAGCTTCAGGTATTAGCAAGGGCACTG-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125812 109 - 190779 CATTGACTGTGAGAGGTGCTGAATGCAAGCTTCAGGTATTAGCAAGGGCACTGTCCCATTGACTGTGAGAGGTGCTGAATGCAAGCTTCAGGTATTAGCAAGGGCACTG-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76797 27 - 106623 ----------------------------------------------------------------------------------AAGCTTCAGGTATTAGCAAGGGCACTG-- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852478 27 - 123690457 ----------------------------------------------------------------------------------AAGCTTCAGGTATCAGCAAGGGCGCTG-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349110 27 - 204787373 ----------------------------------------------------------------------------------AAGCTTCGGGTACTGACAAGGGCACTG-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414278 27 - 192460366 ----------------------------------------------------------------------------------AAGCTTCGGGTACTGACAAGGGCACTG-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153560 27 - 19675229 ----------------------------------------------------------------------------------AAGCTTCGGGTACTGACAAGGGCACTG-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390580 27 - 16847902 ----------------------------------------------------------------------------------AAGCTTCGGGTACTGACAAGGGCACTG-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360518 27 + 91754291 ----------------------------------------------------------------------------------AAGCTTCGGGTACTGACAAGGGCACTG-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1426915 27 + 1977891 ----------------------------------------------------------------------------------AAGCTTCGGGTACTGACAAGGGCACTG-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7366376 27 - 7796314 ----------------------------------------------------------------------------------AAGCTTCGGGTATTGACAAGGGCATTG-- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841173 45 + 74750902 -------TGTGAGAGGTGCTAAACGC--------------------------------------------------------AAGCTCTGGGTACT-GCAAGGGCACCG-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17286996 43 - 17725628 ---------TGAGAGGTGCTAAACGC--------------------------------------------------------AAGCTCCAGGTATTGGCAAGTGCG-CA-- i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 14795500 53 - 22200726 CACTGACTGTGAGAGGTGCCAAATGC--------------------------------------------------------AAGCTTGAAGCATTGGCAGGGGCACTt-- i proCoq1.NW_012133858v1 I 2 C 0 s otoGar3.GL873829 208069 53 + 608964 CATTGACTGTGAAAGGTGCCAGATGC--------------------------------------------------------AAGCTTGAGGTGTTGGCAGGGGCACTG-- i otoGar3.GL873829 T 54 I 3 s mm10.chr16 32788138 27 + 98207768 ----------------------------------------------------------------------------------aagtctgagacatttgccagagtaggg-- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2702471 48 - 6579706 -------TGTGAGAGGTGCTAGATGC--------------------------------------------------------AAGCTTGAGAGGTTCACAGGTACACGCTA i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 14760 201 + 69927 I e micMur3.chr1 88389619 15 + 114275543 I e cebCap1.NW_016107444v1 6377168 156 + 6778120 I e canFam3.chr33 2322759 8 - 31377067 I a score=19480.000000 s hg38.chr3_KI270934v1_alt 63579 3 + 163458 TCA s panTro5.chr3 2535779 3 - 202621043 TCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125921 3 - 190779 TCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76824 3 - 106623 TCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852505 3 - 123690457 TCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349137 3 - 204787373 CCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414305 3 - 192460366 CCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153587 3 - 19675229 CCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390607 3 - 16847902 CCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360545 3 + 91754291 CCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1426942 3 + 1977891 CCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7366403 3 - 7796314 CCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841218 3 + 74750902 TCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287039 3 - 17725628 TCG i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 14795553 3 - 22200726 gcg i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 32788165 2 + 98207768 -tg i mm10.chr16 C 0 I 1 s dasNov3.JH569502 2702519 3 - 6579706 CCA i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 14760 201 + 69927 I e micMur3.chr1 88389619 15 + 114275543 I e cebCap1.NW_016107444v1 6377168 156 + 6778120 I e canFam3.chr33 2322759 8 - 31377067 I e otoGar3.GL873829 208122 3 + 608964 I a score=105205.000000 s hg38.chr3_KI270934v1_alt 63582 11 + 163458 AAGAGGCAATC s panTro5.chr3 2535782 11 - 202621043 AAGAGGCAATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125924 11 - 190779 AAGAGGCAATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76827 11 - 106623 AAGAGGCAATC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852508 11 - 123690457 AAGAGGCAACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349140 11 - 204787373 AAGAGGCAATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414308 11 - 192460366 AAGAGGCAATC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153590 11 - 19675229 AAGAGGCAATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390610 11 - 16847902 AAGAGGCAATC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360548 11 + 91754291 AAGAGGCAATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1426945 11 + 1977891 AAGAGGCAATC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7366406 11 - 7796314 AAGAGGCAATC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841221 10 + 74750902 AAGAGGCCA-C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287042 11 - 17725628 AACAGGCGACC i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 14795556 11 - 22200726 aagggtcagtt i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 208125 11 + 608964 AAGGGGCAATT i otoGar3.GL873829 I 3 C 0 s mm10.chr16 32788168 10 + 98207768 -agaagcCATT i mm10.chr16 I 1 C 0 s dasNov3.JH569502 2702522 11 - 6579706 AAAGGACAAGT i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 14760 201 + 69927 I e micMur3.chr1 88389619 15 + 114275543 I e cebCap1.NW_016107444v1 6377168 156 + 6778120 I e canFam3.chr33 2322759 8 - 31377067 I a score=628576.000000 s hg38.chr3_KI270934v1_alt 63593 67 + 163458 CACATTAGACTGTGCACTGGGCCTGTTTTCAC-GGTTACA-TCTGTGAGCAGAGCTTAGACACTTCCCA s panTro5.chr3 2535793 67 - 202621043 CACATTAGACTATGCACTGGGCCTGTTTTCAC-GGTTACA-TCTGTGAGCAGAGCTTAGACACTTCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125935 67 - 190779 CACATTAGACTATGCACTGGGCCTGTTTTCAC-GGTTACA-TCTGTGAGCAGAGCTTAGACACTTCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76838 67 - 106623 CACATTAGACTGTGCACTGGGCCTGTTTTCAC-GGTTACA-TCTGTGAGCAGAGCTTAGACACTTCCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852519 67 - 123690457 CACATTAGACTCTGCACTGGGCCTGTTTTCAC-GGTCACA-TCTGTGAGCAGAGCTTAGACACTTCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349151 68 - 204787373 CACGTTAGACTGTGTACTGGGCCTGTTTTCACTGGTCACG-TTTGTGAGCAGAGCTTAGATACTTCCCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414319 68 - 192460366 CACGTTAGACTGTGTACCGGGCCTGTTTTCACTGGTCACG-TTTGTGAGCAGAGCTTAGATACTTCCCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153601 68 - 19675229 CACGTTAGACTGTGTACCAGGCCTGTTTTCACTGGTCACG-TTTGTGAGCAGAGCTTAGATACTTCCCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390621 68 - 16847902 CACGTTAGACTGTGTACCGGGCCTGTTTTCACTGGTCACG-TTTGTGAGCAGAGCTTAGATCCTTCCCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360559 68 + 91754291 CACGTTAGACTGTGTACCGGGCCTGTTTTCACTGGTCACG-TTTGTGAGCAGAGCTTAGATACTTCCCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1426956 68 + 1977891 CACGTTAGACTGTGTACCGGGCCTGTTTTCACTGGTCACG-TTTGTGAGCAGAGCTTAGATACTTCCCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7366417 68 - 7796314 CACGTTAGACTGTGTGCCGGGCCTGTTTTCACTGGTCACG-TTTGTGAGCAGAGCTTAGATACTTCCCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841231 54 + 74750902 CACGTTAGGCTCTATACTGGGCCTGTTTTCCGTGGTCACA-TCTGTGAGCAGAGC-------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287053 49 - 17725628 CCCGTCACGCTGTGTCCTGGG-CTGCTTTCCCTGGTCACA-CCT----GCAGAGC-------------- i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 88389634 67 + 114275543 cacattagactgtgcactgggcccattttcactggtAA-A-CCTGTGAGCAGAGCTTAGACACTTCCCA i micMur3.chr1 I 15 I 194 s proCoq1.NW_012133858v1 14795567 67 - 22200726 cacattagactgtgcactggacccattttcactggtca-A-CCTGTGAGCAGAGCTTAGATACTTCCCA i proCoq1.NW_012133858v1 C 0 I 242 s otoGar3.GL873829 208136 67 + 608964 CATGGTAGACTGTGCACTGGGCCCATTTTTGCTGGTCA-G-TCTGTGAGTGGAACTTAGATACTTCCCA i otoGar3.GL873829 C 0 I 5 s mm10.chr16 32788178 47 + 98207768 -ATCTTAGGTGGTGCACCAGGTCTAGCCTCACTGTTCAC--------AGTACAGGT------------- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2702533 65 - 6579706 CACATTGGGCTGTGCACAGAG----TTTTCACTAGTCACACTCTGTGAGTGGAGCCTAGACACAGCCCA i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 14760 201 + 69927 I e cebCap1.NW_016107444v1 6377168 156 + 6778120 I e canFam3.chr33 2322759 8 - 31377067 I a score=335619.000000 s hg38.chr3_KI270934v1_alt 63660 57 + 163458 -----TCATGCCCCATCTGCTACTTTGTACCACACATTAGGAGAACAACCCACCCCTCAGTA s panTro5.chr3 2535860 57 - 202621043 -----TCATGCCCCATCTGCTACTTTGTACCACACATTAGGAGAACAACCCACCCCTCAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126002 57 - 190779 -----TCATGCCCCATCTGCTACTTTGTACCACACATTAGGAGAACAACCCACCCCTCAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76905 57 - 106623 -----TCATGCCCCATCTGCTACTTTGTACCACACATTAGGAGAACAACCCACCCCTCAGTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852586 57 - 123690457 -----TCATGCCCCATCTGCTACTTTGTACTGCACAGTAGGAGAACCACCGCCCCCTCAGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349219 39 - 204787373 -----TCATGCCCCATCTGCTACTGTGTACCGCACAGCAGGAGA------------------ i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414387 57 - 192460366 -----TCATGCCCCATCTGCTACTGTGTACCGCACAGCAGGAGAACCACCCGCCCCTCAGCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153669 57 - 19675229 -----TCATGCCCCATCTGCTACTGTGTACCGCACAGCAGGAGAACCACCCGCCCCTCAGCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390689 57 - 16847902 -----TCATGCCCCATCTGCTACTTTGCACTGCACAGCAGGAGAACCACCCGCCCCTCAGCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360627 57 + 91754291 -----TCATGCCCCACCTGCTACTTTGCACCGCACAGCAGGAGAACCATCCTCCCCTCAGCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427024 57 + 1977891 -----TCATGCCCCATCTGCTACTGTATACCGCACAGCAGGAGAACCACCCGCCCCTCAGCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7366485 57 - 7796314 -----TCATGCCCCATCTGCTACTTTGTACCGCACAGTAGGAGAACCACCCGGCCCTCAGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841285 57 + 74750902 -----TCATGCTCCCTCTGCTGCTTTGTACCGCACAGTGGGAGAACCATCCATGCCTCAGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287102 55 - 17725628 -----TCAGGCTCCATCGGCCACTTTGTCCCGCACGGTGGGAGAACCATCCACGCCT--GAG i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 208208 48 + 608964 -----TCTTGTTCCATCTCCTACTTTGTA---------GAGGGGGGGACCTATACCTCAGAA i otoGar3.GL873829 I 5 C 0 s mm10.chr16 32788225 16 + 98207768 ------------------------------------TCACGAGACCAGCACT---------- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2702598 41 - 6579706 TCACATTGTGCTCCATCTCATACTTTATAGAGC---TGGGGAGA------------------ i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795634 242 - 22200726 I e aotNan1.NW_018503669v1 14760 201 + 69927 I e micMur3.chr1 88389701 194 + 114275543 I e cebCap1.NW_016107444v1 6377168 156 + 6778120 I e canFam3.chr33 2322759 8 - 31377067 I a score=234167.000000 s hg38.chr3_KI270934v1_alt 63717 23 + 163458 AGGCCAGGCCCGTGACATCTGCA s panTro5.chr3 2535917 23 - 202621043 AGGCAAGGCCCGTGACATCTGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126059 23 - 190779 AGGCAAGGCCCGTGACATCTGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76962 23 - 106623 AGGCCAGGCCTGTGACATCTGCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852643 23 - 123690457 AGGCCAGGCCCGTGACATCTGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349258 20 - 204787373 ---CCAGGCCCGTGAAATCTGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414444 23 - 192460366 AGGCCAGGCCCGTGAAATCTGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153726 23 - 19675229 AGGCCAGGCCTGTGAAATCTGCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390746 23 - 16847902 AGGCCAGGCCCGCGAAATCTGCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360684 23 + 91754291 AGGCCAGGCCCATGAAATCTGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427081 23 + 1977891 AGGCCAGGCCCGCGAAATCTGCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7366542 23 - 7796314 AGGCCAGGCCCGTGAAATCTGCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841342 20 + 74750902 AGGCC---TCAGTGAAATCTGCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287157 23 - 17725628 AGGCCAGGCCCATGAAATCCACA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6377324 23 + 6778120 AGGCCAGGCCCATGAAATCTGCA i cebCap1.NW_016107444v1 I 156 C 0 s otoGar3.GL873829 208256 22 + 608964 -AGGTGGGCCCATGAAGTCTGTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32788241 23 + 98207768 GAGCTAGGCCTGTGACATTTATA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2702639 22 - 6579706 -GGCCAAGCCAGTGAAATCTGCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795634 242 - 22200726 I e aotNan1.NW_018503669v1 14760 201 + 69927 I e micMur3.chr1 88389701 194 + 114275543 I e canFam3.chr33 2322759 8 - 31377067 I a score=352968.000000 s hg38.chr3_KI270934v1_alt 63740 34 + 163458 CTGAGCTGACCCAGTCTAACC-TCCAACAAGCCAC s panTro5.chr3 2535940 34 - 202621043 CTGAGCTGACCCAGTCTAACC-TCCAACAAGCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126082 34 - 190779 CTAAGCTGACCCAGTCTAACC-TCCAACAAGCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 76985 33 - 106623 CTGAGCTGACCCAGTCTAACC-TCCAACAAG-CAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852666 34 - 123690457 CTGAGCTGACGCAGTCTAACC-TCCAACAAGCCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349278 35 - 204787373 CGGAGCTGACCCAGCCTAACCTTCCAACAGGCCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414467 35 - 192460366 CGGAGCTGACCCAGCCTAACCTTCCAACAGGCCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153749 35 - 19675229 TGGAGCTGACCCAGCCTAACCTTCCAACAGGCCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390769 35 - 16847902 CGGAGATGACCCAGCCTAACCTTCCAACAGGCCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360707 35 + 91754291 TGGAGCTGACCCAGCCTAACCTTCCAACAAGCCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427104 35 + 1977891 CGGAGCTGACCCAGCCTAACCTTCCAACAGGCCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7366565 35 - 7796314 CAGAGCTGACCCAGCCTAACCTTCCAACAAGCCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841362 35 + 74750902 CTGAGCTGGCCCGGTCTAACCCTCCAGCAAGCCGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287180 35 - 17725628 CTGCGCTAGCCGAGTCCAACCCTCCAGCAAGCCAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6377347 35 + 6778120 CTGGGCTGGCCCAGTCTAACCCTCCAGCAAGCCAC i cebCap1.NW_016107444v1 C 0 I 12 s otoGar3.GL873829 208278 35 + 608964 CTGTGCTGACCTAGTCTAACCTTCTAATAAGTCAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32788264 35 + 98207768 CTGAACTGACCCAGTCTAGTCTTCCAATCATTCAT i mm10.chr16 C 0 C 0 s canFam3.chr33 2322767 35 - 31377067 CTGAGCTGCGCTAGTCTGATCCCCCACTGACTCAC i canFam3.chr33 I 8 C 0 s dasNov3.JH569502 2702661 35 - 6579706 CTGAGTTGACCTGTCCTAAGCTTCCGGTGATTCAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795634 242 - 22200726 I e aotNan1.NW_018503669v1 14760 201 + 69927 I e micMur3.chr1 88389701 194 + 114275543 I a score=163454.000000 s hg38.chr3_KI270934v1_alt 63774 37 + 163458 ACCATCCCCA--------------------------------------------TCCTC-AAAACCCT--------------------------------------------GACCCCGGAACTTT s panTro5.chr3 2535974 37 - 202621043 ACCATCCCCA--------------------------------------------TCCTC-AAAACCCT--------------------------------------------GACCCCGGAACTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126116 37 - 190779 ACCATCCCCA--------------------------------------------TCCTC-AAAACCCT--------------------------------------------GACCCCGGAACTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77018 37 - 106623 ACCATCCCCA--------------------------------------------TCCTC-AAAACCCT--------------------------------------------GACCCTGGAACTTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852700 37 - 123690457 ACCATCCCCA--------------------------------------------TCCCC-AAAACCCT--------------------------------------------GACCCCGGAATTTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349313 38 - 204787373 AGCATCCGCA--------------------------------------------TCCCCGAGAGCCCA--------------------------------------------GGCCCCGGGATTTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414502 38 - 192460366 AGCATCCGCA--------------------------------------------TCCCCGAGAGCCCA--------------------------------------------GGCCCTGGGATTTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153784 82 - 19675229 AGCATCCGCATCCCCGAGAGCCCAGGCCCCGGGATTTCAGCCACACCACCCCCTTCCCCGAGAGCCCA--------------------------------------------GGCCCTGGGATTTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390804 38 - 16847902 AGCATCCACA--------------------------------------------TCCCCGAGTACCCA--------------------------------------------GGCCCCGGGATTTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360742 82 + 91754291 AGCATCCGCA--------------------------------------------TCCCCGAGAGCCCCAGTCCCGGGATTTCAGCCACACCATCCGCATCCCCGAGAGTGCTGGCCCCGGAATTTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427139 38 + 1977891 AGCATCCACA--------------------------------------------TCCCCGAGAGCCCA--------------------------------------------GGCCCCAGGATTTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7366600 82 - 7796314 AGCATCCGCA--------------------------------------------TCCCCGAGAGCCCCGGTCCTGAAATTTCAGCCACAGCATCCGCATCCCCAAGAGTGCTGGCCCCGGAATTTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841397 31 + 74750902 ------ACCA--------------------------------------------TCCCCAGACGCCCT--------------------------------------------GAC-CCAGAATTTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287215 32 - 17725628 ------GCCG--------------------------------------------TCCCCAGAtgccct--------------------------------------------gatgcccgaatttc i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 208313 29 + 608964 ------ACCA--------------------------------------------TTCCCAACAACCAT-----------------------------------------------CCCCAAATTTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32788299 32 + 98207768 ------AGCA--------------------------------------------TCCCCAAGAGCCTT--------------------------------------------GACCCCAGAATTTT i mm10.chr16 C 0 C 0 s canFam3.chr33 2322802 31 - 31377067 ------ACCA--------------------------------------------TTCCCAAAAGCTCT---------------------------------------------GCCCCTGGATTTC i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2702696 32 - 6579706 ------ACCA--------------------------------------------TCCTCAAAAGCCCT--------------------------------------------GACCCCAGAATTCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795634 242 - 22200726 I e aotNan1.NW_018503669v1 14760 201 + 69927 I e micMur3.chr1 88389701 194 + 114275543 I e cebCap1.NW_016107444v1 6377382 12 + 6778120 I a score=168560.000000 s hg38.chr3_KI270934v1_alt 63811 16 + 163458 ACCATTGGAAGTTCTA s panTro5.chr3 2536011 16 - 202621043 ACCATTGGAAGTTCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126153 16 - 190779 ACCATTGGAAGTTCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77055 16 - 106623 ACCATTGGAAGTTCTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852737 16 - 123690457 ACCATCGGAAGTTCCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349351 16 - 204787373 ACCATCGGAAGTTCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414540 16 - 192460366 ACCATCGGAAGTTCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153866 16 - 19675229 ACCATCGGAAGTTCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390842 16 - 16847902 ACCATCGGAAGTTCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360824 16 + 91754291 ACCATCGGAAGTTCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427177 16 + 1977891 ACCATCGGAAGTTCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7366682 16 - 7796314 ACCATTGGAAGCTCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841428 16 + 74750902 ACCCTTGGAAGTCCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287247 16 - 17725628 accattggaagtcctg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6377394 16 + 6778120 ACCATTGGAAGTCCTG i cebCap1.NW_016107444v1 I 12 C 0 s otoGar3.GL873829 208342 16 + 608964 ACCATTGGAAGCTCTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32788331 8 + 98207768 ACTAATGG-------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2322834 16 - 31377067 GACCCTGGGACCTTTG i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2702728 16 - 6579706 ACTAGTAGATGTTCTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795634 242 - 22200726 I e aotNan1.NW_018503669v1 14760 201 + 69927 I e micMur3.chr1 88389701 194 + 114275543 I a score=379542.000000 s hg38.chr3_KI270934v1_alt 63827 30 + 163458 TCCAGTG-----GGTTTTAGGAGAATTTT-CCCAAC s panTro5.chr3 2536027 30 - 202621043 TCCAGTG-----GGTTTTAGGAGAATTTT-CCCAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126169 30 - 190779 TCCAGTG-----GGTTTTAGGAGAATTTT-CCCAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77071 30 - 106623 TCCAGTG-----GGTTTTAGGAGAATTTT-CCCAAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852753 30 - 123690457 TCCAGTG-----GGTTTTAGGAGAATTTT-CCCAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349367 30 - 204787373 TCCAGTG-----GGCTTCAGGAGAATTTT-CCCAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414556 30 - 192460366 TCCAGTG-----GGCTTCAGGAGAATTTT-CCCAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153882 31 - 19675229 TCCAGTG-----GGCTTCAGGAGAATTTTCCCCAAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390858 30 - 16847902 TCCAGTG-----GGCTTCAGGAGAATTTT-CCCAAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360840 30 + 91754291 TCCAGTG-----GGCTTCAGGAGAATTTT-CCCAAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427193 30 + 1977891 TCCAGTG-----GGCTTCAGGAGAATTTT-CCCAAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7366698 30 - 7796314 TCCAGTG-----GGTTTCAGGAGAATTTT-CCCGAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841444 30 + 74750902 TCCTGCG-----GGTTTTAGGAGAATTTT-CCCGAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287263 30 - 17725628 tccaatg-----ggttttaggagaatttt-CCCAAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6377410 30 + 6778120 TCCAGTG-----GGTTTTAGGGGAATCTT-CCCAGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 14961 30 + 69927 TCCAGCG-----GCTTTTAGGAGAATTTT-CCCAGC i aotNan1.NW_018503669v1 I 201 C 0 s otoGar3.GL873829 208358 35 + 608964 CCCAGTGATCCTGGTTTTAGGAGGGTATT-CCAAGT i otoGar3.GL873829 C 0 I 4 s mm10.chr16 32788339 26 + 98207768 TCTAGGA-----A----TAAAAGAATTTC-TCCAGA i mm10.chr16 C 0 I 1 s canFam3.chr33 2322850 35 - 31377067 TCCTGTGATCTGGGTCTTAGGGGAATTTT-CCCAAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2702744 35 - 6579706 TCCAATGTCTTAGGTTTTAGGAGAATTTC-CCCAAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795634 242 - 22200726 I e micMur3.chr1 88389701 194 + 114275543 I a score=78763.000000 s hg38.chr3_KI270934v1_alt 63857 7 + 163458 TTGTACA s panTro5.chr3 2536057 7 - 202621043 TTGTACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126199 7 - 190779 TTGTACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77101 7 - 106623 TTGTACA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852783 7 - 123690457 CTGTGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349397 7 - 204787373 TTGTACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414586 7 - 192460366 TTGTACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153913 7 - 19675229 TTGTACA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390888 7 - 16847902 TTGTACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360870 7 + 91754291 TTGTACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427223 7 + 1977891 TTGTACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7366728 7 - 7796314 TTGTACA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841474 7 + 74750902 TTGTATA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287293 7 - 17725628 TTGCACC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6377440 7 + 6778120 TTGCACA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 14991 7 + 69927 TTGCACA i aotNan1.NW_018503669v1 C 0 I 48 s micMur3.chr1 88389895 5 + 114275543 TTGTA-- i micMur3.chr1 I 194 C 0 s otoGar3.GL873829 208397 5 + 608964 GTGTA-- i otoGar3.GL873829 I 4 C 0 s mm10.chr16 32788366 7 + 98207768 TGGTATT i mm10.chr16 I 1 I 2 s canFam3.chr33 2322885 7 - 31377067 TTATACA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2702779 7 - 6579706 TTGTACA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795634 242 - 22200726 I a score=497833.000000 s hg38.chr3_KI270934v1_alt 63864 44 + 163458 AATACATCCCAATCATGGTCCTCATCTAGAGTATACATCTCTGC s panTro5.chr3 2536064 44 - 202621043 AATACATCCCAATCATGGTCCTCATCTAGAGTATACATCTCTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126206 44 - 190779 AATACATCCCAATCATGGTCCTCATCTACAGTATACATCTCTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77108 44 - 106623 AATACATCCCAATCATGGTCCTCATCTAGAGTATACATCTCTGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852790 44 - 123690457 AATACATCCCAGTCATGGTCCTCATCTACAGTGCCCATCTCTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349404 44 - 204787373 AATGCCTCCCAATCTTGGTCCTCATCTAGGGTGTACATCTCTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414593 44 - 192460366 AATGCCTCCCAATCTTGGTCCTCATCTAGGGTGTACATCTCTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153920 44 - 19675229 AATGCCTCCCAATCTTGGTCCTCATCTAGGGTGTACATCTCTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390895 44 - 16847902 AATGCCTCCCAATCTTGGTCCTCATCTAGGGTGTACATCTCTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360877 44 + 91754291 AATGCCTCCCAATCTTGGTCCTCATCTAGAGTGTACATCTCTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427230 44 + 1977891 AATGCCTCCCAATCTTGGTCCTCATCTAGGGTGTACATCTCTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7366735 44 - 7796314 AACGCATCCCAGTCTTGGTCCTCATCTGGAGTGTACGTCCCTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841481 44 + 74750902 ACTCCATCCCAATCTCCGTCCCCATCTGGAGTGTACATCTATGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287300 44 - 17725628 ACCACTCCCCAATCTCGGTCCCCACCTGGAGTGCACACCTGTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6377447 44 + 6778120 ACTACATCCCAGTCTTGGTCCCCATCTGGAGTGCACATCTATGG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88389900 44 + 114275543 CAAATATCCCAATCTTGGTCTCTATCTAGAGCACATATCTATGG i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 208402 44 + 608964 AATATGTCCCAATCTTGGTCTCTATCTAGAGCATATATCTATAC i otoGar3.GL873829 C 0 I 2 s mm10.chr16 32788375 42 + 98207768 AAGACACCACAATCTTCCTCTTTGCCTGGAGCATATCTCCAA-- i mm10.chr16 I 2 C 0 s canFam3.chr33 2322892 43 - 31377067 AATATGTCCCAATCTTGGTCCTCATCTAGAACATGCATCCATG- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2702786 44 - 6579706 AATACAACCCAATCTTGGTCCTCATCTAGAGTGTACATGTATGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795634 242 - 22200726 I e aotNan1.NW_018503669v1 14998 48 + 69927 I a score=16541.000000 s hg38.chr3_KI270934v1_alt 63908 2 + 163458 GG- s panTro5.chr3 2536108 2 - 202621043 GG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126250 2 - 190779 GG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77152 2 - 106623 GG- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852834 2 - 123690457 GG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349448 2 - 204787373 GG- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414637 2 - 192460366 GG- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153964 2 - 19675229 GG- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390939 2 - 16847902 GG- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360921 2 + 91754291 GG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427274 2 + 1977891 GG- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7366779 2 - 7796314 GG- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841525 2 + 74750902 GC- i calJac3.chr17 C 0 I 2 s saiBol1.JH378146 17287344 2 - 17725628 GT- i saiBol1.JH378146 C 0 I 2 s cebCap1.NW_016107444v1 6377491 2 + 6778120 GT- i cebCap1.NW_016107444v1 C 0 I 2 s micMur3.chr1 88389944 2 + 114275543 GG- i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14795876 2 - 22200726 GG- i proCoq1.NW_012133858v1 I 242 C 0 s otoGar3.GL873829 208448 2 + 608964 GG- i otoGar3.GL873829 I 2 I 5 s mm10.chr16 32788417 2 + 98207768 GG- i mm10.chr16 C 0 C 0 s canFam3.chr33 2322935 2 - 31377067 GG- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2702830 2 - 6579706 -AT i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 14998 48 + 69927 I a score=334364.000000 s hg38.chr3_KI270934v1_alt 63910 28 + 163458 -TTTTTTCTGCCTAGCCTCCCTATTTTCT- s panTro5.chr3 2536110 28 - 202621043 -TTTTTTCTGCCTGGCCTCCCTATTTTCT- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126252 28 - 190779 -TTTTTTCTGCCTGGCCTCCCTATTTTCT- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77154 28 - 106623 -TTTTTTCTGCCTAGCCTCCCTATTTTCT- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852836 28 - 123690457 -ATTTTTCTGCCCAGCCTCCCTATGTTCT- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349450 27 - 204787373 --TTTTTCTGCCTAGCCTCCCTGTTTTCT- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414639 27 - 192460366 --TTTTTCTGCCTAGCCTCCCTGTTTTCT- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153966 27 - 19675229 --TTTTTTTGTCTAGCCTCCCTGTTTTCT- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390941 27 - 16847902 --TTTTTCTGCCTAGCCTCTCTGTTTTCT- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360923 27 + 91754291 --TTTTTCTGCCTAGCCTCCCTGTTTTCT- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1427276 27 + 1977891 --TTTTTCTGCCTAGCCTCCCTGTTTTCT- i manLeu1.NW_012102020v1 C 0 I 3322 s colAng1.NW_012118932v1 7366781 27 - 7796314 --TTTTTCTGCCCAGCCTCCCTGTTTTCT- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841529 28 + 74750902 -TTTCTTCTGCTTCACCTCCCGCTTTCCT- i calJac3.chr17 I 2 C 0 s saiBol1.JH378146 17287348 28 - 17725628 -TTTCTTCTGCCTCGCCTCCCACGTTCCC- i saiBol1.JH378146 I 2 C 0 s cebCap1.NW_016107444v1 6377495 28 + 6778120 -TTTCTTCTGCCTCACCTCCCACGTTCCT- i cebCap1.NW_016107444v1 I 2 C 0 s aotNan1.NW_018503669v1 15046 28 + 69927 -TTTCTTCTGCCTGGCCTCCCACTTTCCT- i aotNan1.NW_018503669v1 I 48 C 0 s micMur3.chr1 88389946 28 + 114275543 -CTTTTTTTGTCTAGCATCCCTGTTTTCT- i micMur3.chr1 C 0 I 1 s proCoq1.NW_012133858v1 14795878 28 - 22200726 -TTTTTTCTGTCTAGCATCCCTATTTTCT- i proCoq1.NW_012133858v1 C 0 I 1 s otoGar3.GL873829 208455 28 + 608964 -TTTTTTCTGCCTACCATCTCTATTTCCT- i otoGar3.GL873829 I 5 I 1 s mm10.chr16 32788419 28 + 98207768 -GGTTTTATATCTAGCATCCCTATTTCAT- i mm10.chr16 C 0 C 0 s canFam3.chr33 2322937 28 - 31377067 -TATTTTCTGCCTGGCATCCCCAGCGCCT- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2702832 29 - 6579706 TTTTTTCCTGTCCAGTC-CTCTATTTCCTT i dasNov3.JH569502 C 0 C 0 a score=631195.000000 s hg38.chr3_KI270934v1_alt 63938 53 + 163458 TGGGGCTCATCCTTCC---T-CTATGGGATCCTGACTGGGTTGTCAGTCA----------------------------------------------------------------------------------------------TGGTGAC s panTro5.chr3 2536138 53 - 202621043 TGGGGCTCATCCTTCC---T-CTATGGGATCCTGACTGGGTTGTCAGTCA----------------------------------------------------------------------------------------------TGGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126280 53 - 190779 TGGGGCTCATCCTTCC---T-CTATGGGATCCTGACTGGGTTGTCAGTCA----------------------------------------------------------------------------------------------TGGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77182 53 - 106623 TGGGGCTCATCCTTCC---T-CTATGGGATCCTGACTGGGTTGTCAGTCA----------------------------------------------------------------------------------------------TGGTGAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852864 54 - 123690457 TGGGGCCCATCCTTCC---TCCTGTGGGATCCTGATTGGGTTGTCAGTCA----------------------------------------------------------------------------------------------TGGTGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349477 53 - 204787373 TGGGGCTCGTCCTTCC---T-CTATGGGATCCTGATTGGGTTGTCAGTCG----------------------------------------------------------------------------------------------TGATGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414666 53 - 192460366 CGGGGCTCGTCCTTCC---T-CTATGGGATCCTGATTGGGTTGTCAGTCG----------------------------------------------------------------------------------------------TGATGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19153993 53 - 19675229 CGGGGCTCGTCCTTCC---T-CTATGGGATCCTGATTGGGTAGTCAGTCG----------------------------------------------------------------------------------------------TGATGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16390968 53 - 16847902 CGGGGCTCGTCCTTCC---T-TTATGGGATCCTGATTGGGTTGTCAGTCG----------------------------------------------------------------------------------------------TGATGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91360950 53 + 91754291 CGGGGCTCATCCTTCC---T-CTATGGGATCCTGATTGGGTTGTCAGTCG----------------------------------------------------------------------------------------------TGGTGGC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7366808 53 - 7796314 CAGGGCTCGTCCTTCC---T-CTATGGGATCCTGATTGGGCTGTCAGTCA----------------------------------------------------------------------------------------------TGGTGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841557 147 + 74750902 TGGGGCTCATCCTTCC---T-CTGTGGGACCCTGATTGGGTTGTCAGTCAGTTTTTTGGTTTGTTTTTTAATTGCTTTCTTCTTTTAGTGGGAAGCAGACACAGGGTGGGAGGCAGTGCGACACCTCCTGGTGAGAACCAGGATAAGTGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287376 53 - 17725628 TGGGGCTCGTCCTTCC---T-CTACGGGACCCGGATTGGGTTGTCAGTCA----------------------------------------------------------------------------------------------CGGTGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6377523 53 + 6778120 TGGGGCTCATCCTTCC---T-CTGTGGGACCCTGATTAGGTTGTCAGTCA----------------------------------------------------------------------------------------------CGGTGGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 15074 53 + 69927 TGGGGCTCATCCTTCC---T-CTATGGGACCCTGACTGGGTTGTCAGTTA----------------------------------------------------------------------------------------------CGGTGGC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88389975 55 + 114275543 T-GGGCCCATCCTTGCCATT-CTATGTGGTCCTGATTTGGCTGTCAGTCA----------------------------------------------------------------------------------------------TGGTGGC i micMur3.chr1 I 1 C 0 s proCoq1.NW_012133858v1 14795907 56 - 22200726 TAGGGCCCATCCTTCCCATT-CTGTGTGGTCCTGATTTGGCTGTCAGTCA----------------------------------------------------------------------------------------------TGGTGGC i proCoq1.NW_012133858v1 I 1 C 0 s otoGar3.GL873829 208484 56 + 608964 TGGGGTCCATCCTTCCCATC-CTATGTGGTCCTGATTTGGCTGTCAGTCA----------------------------------------------------------------------------------------------TGGCGGC i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32788447 46 + 98207768 --------GTCTTTTCCCAT-TTATGATGTGTT--TTGAGATGTAAATCA----------------------------------------------------------------------------------------------CAGTGGC i mm10.chr16 C 0 I 1147 s canFam3.chr33 2322966 56 - 31377067 TGAGGCCTGTCCTTCTCATT-CCACGTGGTTCATTTTGAGCTGTCAGTCA----------------------------------------------------------------------------------------------TGGTGGC i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2702861 56 - 6579706 TGGGGACTGTCCTGCCTACT-CCATGTGGTCGTGGTTGGGTTGTTAGTCA----------------------------------------------------------------------------------------------CAGTGGC i dasNov3.JH569502 C 0 C 0 e manLeu1.NW_012102020v1 1427303 3322 + 1977891 I a score=174720.000000 s hg38.chr3_KI270934v1_alt 63991 12 + 163458 CCTTGCAGGCCA s panTro5.chr3 2536191 12 - 202621043 CCTTGCAGGCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126333 12 - 190779 CCTTGCAGGCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77235 12 - 106623 CCTTGCAGGCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852918 12 - 123690457 CCTTACAGGCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349530 12 - 204787373 CCTTGCAGGCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414719 12 - 192460366 CCTTGCAGGCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19154046 12 - 19675229 CCTTGCAGGCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16391021 12 - 16847902 CCTTGCAGGCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361003 12 + 91754291 CCTTGCAGGCCA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7366861 12 - 7796314 CCTGGCAGGCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841704 12 + 74750902 CCTTCCAGGCTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287429 12 - 17725628 CCTTCCAGGCTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6377576 12 + 6778120 CCTTCCAGGCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 15127 12 + 69927 CCTTCCAGGCTA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88390030 12 + 114275543 CTTTGCAGGCCA i micMur3.chr1 C 0 I 214 s proCoq1.NW_012133858v1 14795963 12 - 22200726 CCTTGCAGGCCA i proCoq1.NW_012133858v1 C 0 I 336 s otoGar3.GL873829 208540 12 + 608964 CCTTGAAAGCCA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2323022 12 - 31377067 CCTTGCAGACCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2702917 12 - 6579706 CCTTGCAGGCCA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32788493 1147 + 98207768 I e manLeu1.NW_012102020v1 1427303 3322 + 1977891 I a score=361402.000000 s hg38.chr3_KI270934v1_alt 64003 42 + 163458 TGGAGACCTGCA-------CTTCCCCAG-ATGACATGAAAATTTGGGGAG s panTro5.chr3 2536203 42 - 202621043 CGGAGACCTGCG-------CTTCCCCGG-ATGACATGAAAATTTGGGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126345 42 - 190779 TGGAGACCTGCG-------CTTCCCCGG-ATGACATGAAAATTTGGGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77247 42 - 106623 CGGAGACCTGCG-------CTTCCCCGG-ATGACATGAAAATTTGGGGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852930 42 - 123690457 CGGAGACCTGCT-------CTTCCCCGG-ATGACATGAAAATTTGGGGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349542 42 - 204787373 CGGAGACCTGCC-------CTTCCCCGG-ATGACATGAAAATTAGGGGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414731 42 - 192460366 CGGAGACCTGCC-------CTTCCCCGG-ATGACATGAAAATTAGGGGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19154058 42 - 19675229 CGGAGACCTGCC-------CTTCCCCGG-ATGACATGAAAATTTGGGGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16391033 42 - 16847902 CGGAGACCTGCC-------CTTCCCCGG-ATGACATGAAAATTTGGGGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361015 42 + 91754291 CGGAGACCTGCC-------CTTCCCTGG-ATGACATGAAAATTTGGGGAC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7366873 42 - 7796314 CGGAGACCTGCC-------CTGCCCCAG-ATGACATGAAAATTTGGGGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841716 42 + 74750902 AGGAGACCTTTC-------CTTCCCTGG-GTGACATGAAAATTTGGGGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287441 42 - 17725628 AGGAGACCTGTC-------CTTCCCCGG-ATGACATGAAAATTTGGGGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6377588 42 + 6778120 AGAAGACCTGTC-------CTTCCCCGG-ATGACATGAAAATTTGGGGAG i cebCap1.NW_016107444v1 C 0 I 187 s aotNan1.NW_018503669v1 15139 42 + 69927 AGGAGACCTGTC-------CTTCCCCGG-ATGACATGAGAATGTGGGGAG i aotNan1.NW_018503669v1 C 0 I 219 s otoGar3.GL873829 208552 45 + 608964 ATGAGACAAGTCAGAAGGACTTATC-----TGATATACAAATTTTGAGAC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2323034 43 - 31377067 GTAAGATCAGTC-------TTTCCCTAGTATAATATGCAGATCTTGGGAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2702929 17 - 6579706 ATGAGAC-AGTC-------CTTCCC------------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795975 336 - 22200726 I e mm10.chr16 32788493 1147 + 98207768 I e micMur3.chr1 88390042 214 + 114275543 I e manLeu1.NW_012102020v1 1427303 3322 + 1977891 I a score=13446.000000 s hg38.chr3_KI270934v1_alt 64045 2 + 163458 AG s panTro5.chr3 2536245 2 - 202621043 AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126387 2 - 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77289 1 - 106623 -G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852972 2 - 123690457 AG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349584 2 - 204787373 AG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414773 2 - 192460366 AG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19154100 2 - 19675229 AG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16391075 2 - 16847902 AG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361057 2 + 91754291 AG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7366915 2 - 7796314 AG i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 208597 2 + 608964 AG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2323077 2 - 31377067 AG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14795975 336 - 22200726 I e mm10.chr16 32788493 1147 + 98207768 I e aotNan1.NW_018503669v1 15181 219 + 69927 I e micMur3.chr1 88390042 214 + 114275543 I e dasNov3.JH569502 2702946 0 - 6579706 C e saiBol1.JH378146 17287483 0 - 17725628 C e calJac3.chr17 73841758 0 + 74750902 C e cebCap1.NW_016107444v1 6377630 187 + 6778120 I e manLeu1.NW_012102020v1 1427303 3322 + 1977891 I a score=16859.000000 s hg38.chr3_KI270934v1_alt 64047 4 + 163458 GGgg s panTro5.chr3 2536247 4 - 202621043 GGgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126389 4 - 190779 GGgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77290 4 - 106623 GGgg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852974 4 - 123690457 GGgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349586 4 - 204787373 GGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414775 4 - 192460366 GGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19154102 4 - 19675229 GGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16391077 4 - 16847902 GGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361059 4 + 91754291 GGGC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7366917 4 - 7796314 GGGC i colAng1.NW_012118932v1 C 0 C 0 s canFam3.chr33 2323079 4 - 31377067 GGAG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14795975 336 - 22200726 I e mm10.chr16 32788493 1147 + 98207768 I e aotNan1.NW_018503669v1 15181 219 + 69927 I e micMur3.chr1 88390042 214 + 114275543 I e dasNov3.JH569502 2702946 0 - 6579706 C e saiBol1.JH378146 17287483 0 - 17725628 C e calJac3.chr17 73841758 0 + 74750902 C e cebCap1.NW_016107444v1 6377630 187 + 6778120 I e otoGar3.GL873829 208599 0 + 608964 C e manLeu1.NW_012102020v1 1427303 3322 + 1977891 I a score=136204.000000 s hg38.chr3_KI270934v1_alt 64051 32 + 163458 ccgggtgcggtggctcatgtctgtaatcccag s panTro5.chr3 2536251 32 - 202621043 ctggacgcggtggctcatgtctgtaatcccag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126393 32 - 190779 ccggacgcggtggctcatgtctgtaatcccag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77294 32 - 106623 ccggacgcggtggctcatgtctgtaatcccag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2852978 32 - 123690457 ccgggcgcggtggctcatgcctgtaatcccag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349590 32 - 204787373 ccaggcgtggtggctcacacctgtaatcccag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414779 32 - 192460366 ccaggcgtggtggctcacacctgtaatcccag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19154106 32 - 19675229 ccaggcgtggtggctcacacctgtaatcccag i macNem1.NW_012014355v1 C 0 M 648 s cerAty1.NW_012004056v1 16391081 32 - 16847902 ccaggcgtggtggctcacacctgtaatcccag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361063 32 + 91754291 ccaggcgcagtggctcacgcctgtaatcccag i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7366921 32 - 7796314 ccgggcgcggtggctcaagcctgtaatcccag i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 2702946 15 - 6579706 ----------TGTGTTATGTGTGGA------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795975 336 - 22200726 I e mm10.chr16 32788493 1147 + 98207768 I e aotNan1.NW_018503669v1 15181 219 + 69927 I e micMur3.chr1 88390042 214 + 114275543 I e saiBol1.JH378146 17287483 0 - 17725628 C e calJac3.chr17 73841758 0 + 74750902 C e cebCap1.NW_016107444v1 6377630 187 + 6778120 I e canFam3.chr33 2323083 0 - 31377067 C e otoGar3.GL873829 208599 0 + 608964 C e manLeu1.NW_012102020v1 1427303 3322 + 1977891 I a score=710335.000000 s hg38.chr3_KI270934v1_alt 64083 210 + 163458 cactttgggaggccaagacgggtggatcacgaggtcaggagattgagactattctggctaacacggtgaaaccccgtctctactaaaaaaaaaaac-ataaaaattagttgggcgtggtggcgggcgcctgtagtcccagctactt-gggaggctgaggcaggagaatg-gcgtgaacccaggaggcggagcttgcagtgagctgagatcgca s panTro5.chr3 2536283 209 - 202621043 cactttgggaggccaagacgggtggatcacgaggtcaggagattgagactatcctggctaacacggtgaaaccccgtctctact-aaaaaaaatac-ataaaaattagtcgggcgtggtggtgggcgcctgtagtcccagctactt-gggaggctgaggcaggagaatg-gcgtgaacccaggaggcggagcttgcagtgagctgagatcgcg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126425 209 - 190779 cactttgggaggccaagacgggtggatcacgaggtcaggagattgagactatcctggctaacacggtgaaaccccgtctctact-aaaaaaaatac-ataaaaattagtcgggcgtggtggtgggcgcctgtagccccagctactt-gggaggctgaggcaggagaatg-gcgtgaacccaggaggcggagcttgcagtgagctgagatcgcg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77326 208 - 106623 cactttgggaggccaagacgggtggatcacgaggtcaggagattgagactatcctggctaacacggtgaaa-cccgtctctactaaaaaaaaatac-ataaaaattagtc-ggcgtggtggcgggtgcctgtagtcccagctactt-gggaggctgaggcaggagaatg-gcgtgaacccaggaagcggagcttgcagtgagctgagatcgcg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853010 209 - 123690457 cactttgggaggccaagacgggcagatcacgaggtcaggagatcgagactatcctggctaacacggtgaaaccccgtctctact-aaaaaaaatac-aaaaaaaatagccgggtgtggtggcgggcgcctgtagtcccagctactg-gggaggctgaggcaggagaatg-gcgtgaacctgggaggcggagcttgcaatgagctgagattgtg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349622 209 - 204787373 cactttgggaggccgagacgggcggatcacgaggtcaggagatcgagaccatcttggctaacacggtgaaaccccgtctctact--aaaaaaatacaaaaaaaattagccaggcgtggtggc-ggcgcctgtagtcccagctactcgggggggctgaggcaggagaatg-gcgtgaacccgggaggcggagcttgcagtgagtcgaggtcaca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192414811 208 - 192460366 cactttgggaggccgagacgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctact--aaaaaaatac-aaaaaaattagccaggcgtggtggc-ggcgcctgtagtcccagctactcgggggggctgaggcaggagaatg-gcgtgaacccgggaggcggagcttgcagtgagtcgaggtcaca i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16391113 208 - 16847902 cactttgggaggccgagacgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctact--aaaaaaatac-aaaaaaattagccaggcgtggtggc-ggcgcctgtagtcccagctactcagggaggctgaggcaggagaatg-gcgtgaacccgggaggcggagcttgcagtgagccgaggtcaca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361095 208 + 91754291 cactttgggaggccgagatgggcaaatcatgaggtcaggagattgagaccatcctggctaacatggtgaaaccccatctctact--aaaaaaatac-aaaaaaattagccaggcgtggtggc-ggcgcctgtagtcccagctactcggggaggctgaggcaggaaaatg-gcgtgaacccgggaggcagagcttgcagtgagccgaggtcaca i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7366953 208 - 7796314 cactttgggaggccgagacgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctgtact--aaaaaaatac-aaaaaaattagccggccctggtggcgggcacctgtagtcccagctaccc-gggaggctgaggcaggaaaatg-gcgtgaacccgggaggcagagcttgcagtgagccaagatcaca i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 2702961 53 - 6579706 ---------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGGAGATGAATGTGCGTTTCTTC-----GCTGAGGTTGC--TAAGCTGGAATCACA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795975 336 - 22200726 I e mm10.chr16 32788493 1147 + 98207768 I e aotNan1.NW_018503669v1 15181 219 + 69927 I e micMur3.chr1 88390042 214 + 114275543 I e macNem1.NW_012014355v1 19154138 648 - 19675229 M e saiBol1.JH378146 17287483 0 - 17725628 C e calJac3.chr17 73841758 0 + 74750902 C e cebCap1.NW_016107444v1 6377630 187 + 6778120 I e canFam3.chr33 2323083 0 - 31377067 C e otoGar3.GL873829 208599 0 + 608964 C e manLeu1.NW_012102020v1 1427303 3322 + 1977891 I a score=295393.000000 s hg38.chr3_KI270934v1_alt 64293 96 + 163458 ccactgcactccagcctgggcgacagagcgagacttcgtctc-aaaaa---acaaaaagaaagaaagaaaaagaaaAAA-----GAAAAGAAAATGTGGGGAGAT s panTro5.chr3 2536492 96 - 202621043 ccactgcactccagcctgggtgacagagcgagacttcgtctc-aaaaa---acaaaaagaaagaaagaaaaagaaaAAA-----GAGAAGAAAATTTGGGGAGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126634 94 - 190779 ccactgcactccagcctgggtgacagagcgagacttcgtctc-aaaaa---acaaaaagaaagaaagaaaa--gaaaaA-----GAAAAGAAAATTTGGGGAGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77534 96 - 106623 ccactgcactccagcctgggcgacagagcgagacttcatctc-aaaaa---acaaaaagaaagaaagaaaaagaaaAAA-----GAAAAGAAAATTTGGGGAGAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853219 102 - 123690457 ccactgcactccagcctgggcaacagagcgagactttgtctcaaaaaa---aaaaaaagaaagaaagaaacagaaAAAAGAAAGGAAAAGAAAATTTGGGGAGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349831 86 - 204787373 ccactgcactccagcctgggcaacagagcgagacttcatctc-aagaa---aaaaaaagagagagagaa---------------gagaaGAAAAGTTGGGGAGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415019 86 - 192460366 ccactgcactccagcctgggcaacagagcgagacttcatctc-aagaa---aaaaaaagagagagagaa---------------gaaaaGAAAAGTTGGGGAGAG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16391321 86 - 16847902 ccactgcactccagcctgggcaacagagcgagacttcatctc-aagaa---aaaaaaagagagagagaa---------------gaaaagaAAAGTTGGGGAGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361303 85 + 91754291 ccactgcactccagcctcggcgacagagcgagacttcatctc-aag-a---aaaaaaagagagagagaa---------------gaaaagaaAAGTTGGGGAGAG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7367161 89 - 7796314 ccactgcactccagcctgggtgacagagcgagacttcgtctc-aaaaaaagaaaaagagagagagaaaa---------------gaaaAGAAAATTTGGGGAGAG i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14795975 336 - 22200726 I e mm10.chr16 32788493 1147 + 98207768 I e aotNan1.NW_018503669v1 15181 219 + 69927 I e micMur3.chr1 88390042 214 + 114275543 I e dasNov3.JH569502 2703014 0 - 6579706 C e macNem1.NW_012014355v1 19154138 648 - 19675229 M e saiBol1.JH378146 17287483 0 - 17725628 C e calJac3.chr17 73841758 0 + 74750902 C e cebCap1.NW_016107444v1 6377630 187 + 6778120 I e canFam3.chr33 2323083 0 - 31377067 C e otoGar3.GL873829 208599 0 + 608964 C e manLeu1.NW_012102020v1 1427303 3322 + 1977891 I a score=27336.000000 s hg38.chr3_KI270934v1_alt 64389 4 + 163458 GGAA s panTro5.chr3 2536588 4 - 202621043 GGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126728 4 - 190779 GGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77630 4 - 106623 GGAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853321 4 - 123690457 GGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349917 4 - 204787373 GGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415105 4 - 192460366 GGAA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16391407 4 - 16847902 GGAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361388 4 + 91754291 GGAA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7367250 4 - 7796314 GGAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841758 4 + 74750902 GGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287483 4 - 17725628 GGAA i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 208599 4 + 608964 GGAC i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14795975 336 - 22200726 I e mm10.chr16 32788493 1147 + 98207768 I e aotNan1.NW_018503669v1 15181 219 + 69927 I e micMur3.chr1 88390042 214 + 114275543 I e dasNov3.JH569502 2703014 0 - 6579706 C e macNem1.NW_012014355v1 19154138 648 - 19675229 M e cebCap1.NW_016107444v1 6377630 187 + 6778120 I e canFam3.chr33 2323083 0 - 31377067 C e manLeu1.NW_012102020v1 1427303 3322 + 1977891 I a score=170867.000000 s hg38.chr3_KI270934v1_alt 64393 27 + 163458 GTCCCTTGTGAATCTATGGCTAACAAg s panTro5.chr3 2536592 27 - 202621043 GTCCCTTGTGAATCTATGGCTAACAAg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126732 27 - 190779 GTCCCTTGTGAATCTATGGCTAACAAg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77634 27 - 106623 GTCCCTTGTGAATCTATGGCTAACAAg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853325 27 - 123690457 GTGCCTTGTGAATCTACGGCTAACAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349921 27 - 204787373 GTGCCTTGTGAATCTATGGCTAACAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415109 27 - 192460366 GTGCCTTGTGAATCTATGGCTAACAAA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16391411 27 - 16847902 GTGCCTTTTGAATCTATGGCTAACAAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361392 27 + 91754291 GTGCCTTGTGAATCTATGGCTAACAAG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7367254 27 - 7796314 GTGCCTTGTGAATCTATGGCTAACAAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841762 27 + 74750902 GTGCCTCGTGAATCTAGGGCTAACAAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287487 27 - 17725628 GTGCCTTGTGAATCTAGGGCTAACAAG i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 208603 27 + 608964 ATGCCTTATGAATCTAGGGCTATCACA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2323083 24 - 31377067 GTGCCT-ATGA--CTCGGGCTGTCACA i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14795975 336 - 22200726 I e mm10.chr16 32788493 1147 + 98207768 I e aotNan1.NW_018503669v1 15181 219 + 69927 I e micMur3.chr1 88390042 214 + 114275543 I e dasNov3.JH569502 2703014 0 - 6579706 C e macNem1.NW_012014355v1 19154138 648 - 19675229 M e cebCap1.NW_016107444v1 6377630 187 + 6778120 I e manLeu1.NW_012102020v1 1427303 3322 + 1977891 I a score=75031.000000 s hg38.chr3_KI270934v1_alt 64420 10 + 163458 gctgcctttt s panTro5.chr3 2536619 10 - 202621043 gctgcctttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126759 10 - 190779 gctgcctttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77661 10 - 106623 gctgcctttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853352 10 - 123690457 GCTGCCTTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349948 10 - 204787373 GCTGCCTTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415136 10 - 192460366 GCTGCCTTTT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16391438 10 - 16847902 GCTGCCTTTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361419 10 + 91754291 GCTGCCTTTT i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7367281 10 - 7796314 GCTGGCTTTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841789 10 + 74750902 GCCGCCTTTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287514 10 - 17725628 GCCGCGTTTT i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 208630 10 + 608964 GTCACCTTTC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2323107 10 - 31377067 GCCAACTTTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2703014 10 - 6579706 GCTACCTTTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795975 336 - 22200726 I e mm10.chr16 32788493 1147 + 98207768 I e aotNan1.NW_018503669v1 15181 219 + 69927 I e micMur3.chr1 88390042 214 + 114275543 I e macNem1.NW_012014355v1 19154138 648 - 19675229 M e cebCap1.NW_016107444v1 6377630 187 + 6778120 I e manLeu1.NW_012102020v1 1427303 3322 + 1977891 I a score=149165.000000 s hg38.chr3_KI270934v1_alt 64430 24 + 163458 catacacatgaagaaagactctga s panTro5.chr3 2536629 24 - 202621043 catacatatgaagaaagactctga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126769 24 - 190779 catacatatgaagaaagactctga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77671 24 - 106623 catacatatgaagaaagactctga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853362 22 - 123690457 CATACATATGAAGAAAGACTC--A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349958 24 - 204787373 CATACATATAAAGAAAGACTCTGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415146 24 - 192460366 CATACATATAAAGAAAGACTCTGA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16391448 24 - 16847902 CATAcatatgaggaacgactctgg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361429 24 + 91754291 CATACATATGAAGAAAGACTCTGA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7367291 24 - 7796314 TATAcatgtgaagaaagactctga i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841799 22 + 74750902 CATATGCATGAAGAAagact--ga i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287524 22 - 17725628 CATACGTATGAAGAAAGACT--GA i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 208640 18 + 608964 TGTACATGTGGAAAAaga------ i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32789640 24 + 98207768 CATATGTAtggagaaagtccatga i mm10.chr16 I 1147 C 0 s canFam3.chr33 2323117 24 - 31377067 CTTACATATGGAGAGAGATTCTGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2703024 22 - 6579706 CTTATatgtggagagatgccat-- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795975 336 - 22200726 I e aotNan1.NW_018503669v1 15181 219 + 69927 I e micMur3.chr1 88390042 214 + 114275543 I e macNem1.NW_012014355v1 19154138 648 - 19675229 M e cebCap1.NW_016107444v1 6377630 187 + 6778120 I e manLeu1.NW_012102020v1 1427303 3322 + 1977891 I a score=437607.000000 s hg38.chr3_KI270934v1_alt 64454 55 + 163458 agaatgaagggagtaaagctaagacagggaaagaaagagaaagtccctgtgatgg s panTro5.chr3 2536653 55 - 202621043 agaatgaagggagtagagctaagatagggagagaaagagaaagtccccgtgatgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126793 55 - 190779 agaatgaagggagtagagctaagatagggagagaaagagaaagtccccgtgatgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77695 55 - 106623 agaatgaagggagtagagctaagacagggagagaaagagaaagtccccgtgatgg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853384 55 - 123690457 AGAATgaagggagtagagctaagacagcgagagaaagagaaagcccccgtgatcg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2349982 55 - 204787373 AGAATgaagggagtagagctaagatggggagagaaagagaaaatccccgtgatca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415170 55 - 192460366 AGAATgaagggagtagagctaagacggggagagaaagagaaaatccccgtgatca i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16391472 55 - 16847902 agaatgaagggagtagagctaagacagggagagaaagagaaaatccccgtgatca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361453 55 + 91754291 AGAATgaagggagttgagctaagacagggagagaaagagaaaatccccgtgatcg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1430625 55 + 1977891 AGAATgaagggagtagagctaagacggggagagaaagagaaaatccccgtgatcg i manLeu1.NW_012102020v1 I 3322 C 0 s colAng1.NW_012118932v1 7367315 55 - 7796314 agaatgaagggagtagagctaagacagggagagaaagagaaaatccccgcgatcg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841821 53 + 74750902 agaataaagggagtacagctgaggcagggagagaaagaaaa--tccccacggcca i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287546 51 - 17725628 AGAATGAAGGACGTACAGCTAAGGCAGGCAGAGAAAGAAA----CCCCATGGCCA i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 208658 39 + 608964 -------agggagcagagctaag--------agaaagaggaaa-ccccatgattg i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32789664 48 + 98207768 agaatgaagggcacagagctgag------tgggacagaggaaatctc-atgattg i mm10.chr16 C 0 C 0 s canFam3.chr33 2323141 48 - 31377067 ACAACGAag-------agctaagagaggtaaagaaagagaaaacccggatgagcg i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2703046 55 - 6579706 agaatgaggggagtagagccaagagaggaagagaaagagaaaatcctgacggtca i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795975 336 - 22200726 I e aotNan1.NW_018503669v1 15181 219 + 69927 I e micMur3.chr1 88390042 214 + 114275543 I e macNem1.NW_012014355v1 19154138 648 - 19675229 M e cebCap1.NW_016107444v1 6377630 187 + 6778120 I a score=589807.000000 s hg38.chr3_KI270934v1_alt 64509 85 + 163458 cgttggagctgctggatccagcc-gt-actgaagct-gaaga-------gacacttgtaggtttctcagaccttgcctttttttttttttttttt- s panTro5.chr3 2536708 71 - 202621043 cattggagctgctggatccagcc-gt-actgaagct-gaaga-------gacacttctaggtttctcagaccctgcc--------------tttt- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126848 70 - 190779 cattggagctgctggatccagcc-gt-actgaagct-gaaga-------gacacttctaggtttctcagaccctgcc---------------ttt- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77750 84 - 106623 cgttggagctgctggatccagccggt-actgaagat-gaaga-------gacacttctaggtttctcagaccttgcc--tttttttttttttttt- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853439 84 - 123690457 cgttgaagctgctggatccagcc-gt-actgaagct-gaaga-------gaagcttctaggttcctcagaccttgct-ttttttttttttttttt- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350037 77 - 204787373 cgtttgagttgccggatccagcc-at-actgaagct-gagga-------gatgcttctaggtttctcagaccttgcc--------tttttttttt- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415225 77 - 192460366 cgtttgagttgccggatccagcc-at-actgaagct-gagga-------gatgcttctaggtttctcagaccttgcc--------tttttttttt- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19154792 75 - 19675229 cgtttgagttgccggatccagcc-at-actgaagct-gagga-------gatgcttctaggtttctcagaccttgcc----------tttttttt- i macNem1.NW_012014355v1 M 648 C 0 s cerAty1.NW_012004056v1 16391527 77 - 16847902 ggtttgagttgctggatccagcc-at-actgaagct-gagga-------gacgcttctaggtttctcagaccttgcc--------tttttttttt- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361508 74 + 91754291 cgtttgagttgccggatccagcc-at-actgaagct-cagga-------gatgcttctaggtttcttagaccttgcc-----------ttttttt- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1430680 83 + 1977891 cgtttgagttgctggatccagcc-at-actgaagct-gagga-------gatgcttctaggtttctcagaccttgcc--tttttttttttttttt- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7367370 81 - 7796314 tgtttgagctgccggatccagcc-ac-actgaagct-gagga-------gacgcttctaggtttctcagaccttgcc----tttttttttttttt- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841874 79 + 74750902 catctgagctgcagggtccagcc-ataactgaaggtggaaga-------gactcttccaggtttctcagagcttgcc--------tgttttttgt- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287597 86 - 17725628 CGTCTGAGCTGCAGGGTCCAGCT-GTAACTGAAGGTAGAAGCCGTAACTGAAGCTTCTAGGTTTCTCAGACCCTGCC--------TGTTGTTTCT- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 208697 59 + 608964 tatctgagctgctggatccagca-atgaccgaagct-ggaaa-------ggcacttctagatttctca---------------------------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32789712 75 + 98207768 tgtttgcactgctggctccagctgac-tccaaagctggagga-------gccacctgtagatttctcagaccttgac--------ttttcc----- i mm10.chr16 C 0 C 0 s canFam3.chr33 2323189 79 - 31377067 catctgagctgctggatccagcc-agaactgaagcttgaaca-------gtcacttctaggtgtctcagccactacc--------ttcccttttc- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2703101 80 - 6579706 tatctgagctcctggatcctaac-ataactgaagcttcaaga-------accacttctaagtttctcagtcagtacc--------ttgtcctttct i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795975 336 - 22200726 I e aotNan1.NW_018503669v1 15181 219 + 69927 I e micMur3.chr1 88390042 214 + 114275543 I e cebCap1.NW_016107444v1 6377630 187 + 6778120 I a score=188768.000000 s hg38.chr3_KI270934v1_alt 64594 27 + 163458 ttttttg--cataaactgccctgacttgg s panTro5.chr3 2536779 27 - 202621043 ttttttg--cataaacttctctgacttgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126918 27 - 190779 ttttttg--cataaacttctctgacttgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77834 27 - 106623 tttttgg--cataaactgctctgacttgg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853523 27 - 123690457 ttttttg--cataaactgctctgacttgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350114 27 - 204787373 ttttttt--cataaactgctctgacttgg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415302 27 - 192460366 ttttttt--cataaactgctctgacttgg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19154867 27 - 19675229 ttttttt--cataaactgctctgacttgg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16391604 29 - 16847902 tttttttcccataaactgctctgacttgg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361582 27 + 91754291 ttttttt--cataaactgctctgacttgg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1430763 27 + 1977891 ttttttt--cataaactgctctgacttgg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7367451 27 - 7796314 ttttctt--cataaactgctctgacttgg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841953 19 + 74750902 ----------ataaaatgctataacttgg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287683 19 - 17725628 ----------ATAAAATGCTATAACGtgg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6377817 27 + 6778120 ttttttg--tataaaatgctataacttgg i cebCap1.NW_016107444v1 I 187 C 0 s otoGar3.GL873829 208756 19 + 608964 --tttca--tgtaaa------tgactcag i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32789787 21 + 98207768 --------aagtaaactaccatgccctgg i mm10.chr16 C 0 C 0 s canFam3.chr33 2323269 21 - 31377067 --------gtataagctacgatgagttgg i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2703181 21 - 6579706 --------gtgtcagctactgtgagttgg i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795975 336 - 22200726 I e aotNan1.NW_018503669v1 15181 219 + 69927 I e micMur3.chr1 88390042 214 + 114275543 I a score=556403.000000 s hg38.chr3_KI270934v1_alt 64621 45 + 163458 gtttctgccacttgcaaccaagagtccGACCTACCCTCCCATCAG s panTro5.chr3 2536806 45 - 202621043 gtttctgccacttgcaaccaagagtcccacctaCCCTCCCATCAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126945 45 - 190779 gtttctgccacttgcaaccaagagtcccacctaCCCTCCCATCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77861 44 - 106623 gtttctg-cacttgcaaccaagagtccGACCTACCCTCCCATCAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853550 45 - 123690457 gtttctgccacttgcaaccaagagtccggcctaCCCTCCCATCAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350141 44 - 204787373 gtttctgccacttacaaccaagagtcctgcctaC-CTCCCATCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415329 44 - 192460366 gtttctgccacttacaaccaagagtcctgcctaC-CTCCCATCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19154894 44 - 19675229 gtttctgccacttacaaccaagagtcctgcctaC-CTCCCATCAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16391633 45 - 16847902 gtttctgccacttacaaccaagagtcctgcttaCGCTCCCATCAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361609 45 + 91754291 gtttctgccacttacagccaagagtcctgcctaCTCTCCCATCAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1430790 45 + 1977891 gtttctgccacttacaaccaagagtcctgcctaCTCTGCCATCAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7367478 45 - 7796314 gtttctgccacttacaaccaagagtcctgcctaGCCTCCCATCAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73841972 44 + 74750902 gtttctgccacttgcaaccaagagtcctgcctaCCGTCCCTCCG- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287702 44 - 17725628 gtttctgccatttgcaaccaagagtcctgcctaCCCTCCCTCCA- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6377844 44 + 6778120 gtttctgccacttgcaaccaagagtcctgcctaCCCTCCCTCCG- i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88390256 45 + 114275543 gtttctgccacttgcaaccaagagtccggcctaCCTGCCCATCAA i micMur3.chr1 I 214 C 0 s otoGar3.GL873829 208775 45 + 608964 gtttcttccgcttgcaaccaagagtcctgcctaTCTGCCCATCAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32789808 44 + 98207768 -ttcctgcttcttgcaacccaaaTCTCTGCTTACTTTCCCATTAA i mm10.chr16 C 0 C 0 s canFam3.chr33 2323290 44 - 31377067 gtgtctgctccttataaccaa-agtcctgcctaTCTGCCCGTTAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2703202 45 - 6579706 gtttctgttgcttgcaaccaagagtcctgTTTACCTCTCCATAAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795975 336 - 22200726 I e aotNan1.NW_018503669v1 15181 219 + 69927 I a score=737624.000000 s hg38.chr3_KI270934v1_alt 64666 66 + 163458 TATCACTGACCTTTGCCTCAGAGGCCAGAAGGCCA-AGCTTCCAAGGACCAGAAGAA----ACTGGGGGCT s panTro5.chr3 2536851 66 - 202621043 TATCACTGACCTTTGCCTCAGGGGCCAGAAGGCCA-AGCTTCCAAGGACCAGAAGAA----ATTGGGGGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126990 66 - 190779 TATCACTGACCTTTGCCTCAGGGGCCAGAAGGCCA-AGCTTCCAAGGACCAGAAGAA----ATTGGGGGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77905 66 - 106623 TATCACTGACCTTTGCCTCAGGGGCCAGAAGGCCA-AGCTTCCAAGGACCAGAAGAA----ACTGGGGGCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853595 66 - 123690457 TATCACTGACCTTCACCTCAGGGGCCAGAAGGCCA-AGCTTCCCAGGACCAGAAGAA----ATTGGGGGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350185 64 - 204787373 TATCACTGACCTTCTCCTCAGGGGCCAG--GGCCA-AGCTTCCAAGGACCAGAAGAA----ATTGGGGGTT i rheMac8.chr2 C 0 I 21 s macFas5.chr2 192415373 64 - 192460366 TATCACTGACCTTCTCCTCAGGGGCCAG--GGCCA-AGCTTCCAAGGACCAGAAGAA----ATTGGGGGTT i macFas5.chr2 C 0 I 15 s macNem1.NW_012014355v1 19154938 64 - 19675229 TATCACTGACCTTCTCCTCAGGGGCCAG--GGCCA-AGCTTCCAAGGACCAGAAGAA----ATTGGGGGTT i macNem1.NW_012014355v1 C 0 I 21 s cerAty1.NW_012004056v1 16391678 64 - 16847902 TATCACTGACCTTCTCCTCAGGGGCCAG--GGCCA-AGCTTCCAAGGACCAGAAGAA----ATTGGGGGTT i cerAty1.NW_012004056v1 C 0 I 1075 s chlSab2.chr15 91361654 64 + 91754291 TATCACCGACCTTCTCCTCAGGGGCCAG--GGCCA-AGCTTCCAAGGACCAGAAGAA----AGTGCGGGTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1430835 64 + 1977891 TATCACTGACCTTCTCCTCAGGGGCCAG--GGCCA-AGCTTCCAAGGACCAGAAGAA----ATTGGGGGTT i manLeu1.NW_012102020v1 C 0 I 21 s colAng1.NW_012118932v1 7367523 66 - 7796314 TATCACTGACTTTCTCCTCAGGGGCCAGAAGGCCA-AGCTTCCAAGGACCAGAAGAA----ATCGGGGGTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73842016 65 + 74750902 TATCACTGACCATCTCCTCAGGGGCCAGAAGGCCA-AGCTTCCAAGGACCGGAAGAA----GTTGGGGTT- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287746 65 - 17725628 TGTCACTGACCTTCTTCTCAGGGGCCAGAAGGCCA-GGTTTCTGAGGACCGGAAGGA----ATTGGGGTT- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6377888 65 + 6778120 TGTCACTGACCTTCTGCTCAGGGGCCAGAGGGCCA-GGCTTCCAAGGACCGGAAGAA----ATTGGGGTT- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 15400 65 + 69927 TATCACTGACCTTCTCCTCAGGGGCCAGAAGGCCA-AGCTTCCAAGGACCGGGAGAA----ACTGGGGTT- i aotNan1.NW_018503669v1 I 219 C 0 s micMur3.chr1 88390301 67 + 114275543 TATCATTGACCTTCTCCTCAGGGGCCTGAAGGCCAGAGTTTCCTAGGACCTAAGGAA----ATTGGGGATT i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 208820 61 + 608964 TATCTCTGACCTTCTCCTCAGGGACCAG------AGAGTTTCCTAGGACCTAAAGAA----ATGTGGGCTT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32789852 60 + 98207768 TATCATTGGCTCTTT----------CAAAAGGCCT-GCACTCCCAAGACCTGAAAAATTGGATCTGGGGCT i mm10.chr16 C 0 C 0 s canFam3.chr33 2323334 66 - 31377067 TATCATTGATCTTCTCC-CAAGGGATAGAAGGCCTGAACTTCCTATGGCCTGAGGAA----ATTGGGGGCG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2703247 26 - 6579706 -----------------------------------TATTTTT----GACTTGAGAAA----ATTGGAGA-- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795975 336 - 22200726 I a score=16277.000000 s hg38.chr3_KI270934v1_alt 64732 5 + 163458 CTAGG s panTro5.chr3 2536917 5 - 202621043 CCAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127056 5 - 190779 CCAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77971 5 - 106623 CCAGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853661 5 - 123690457 CCGGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192415452 5 - 192460366 TTGGG i macFas5.chr2 I 15 I 1 s chlSab2.chr15 91361718 3 + 91754291 --GGG i chlSab2.chr15 C 0 I 2 s colAng1.NW_012118932v1 7367589 3 - 7796314 --GGG i colAng1.NW_012118932v1 C 0 I 1 s calJac3.chr17 73842081 5 + 74750902 GCGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287811 5 - 17725628 GTGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6377953 5 + 6778120 GCGGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 15465 5 + 69927 GCGGG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88390368 3 + 114275543 --AGG i micMur3.chr1 C 0 I 5 s otoGar3.GL873829 208881 3 + 608964 --GGG i otoGar3.GL873829 C 0 I 2 s mm10.chr16 32789912 3 + 98207768 --GGG i mm10.chr16 C 0 I 2 s canFam3.chr33 2323400 4 - 31377067 -AGGG i canFam3.chr33 C 0 I 4 s dasNov3.JH569502 2703273 4 - 6579706 -TGGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795975 336 - 22200726 I e macNem1.NW_012014355v1 19155002 21 - 19675229 I e manLeu1.NW_012102020v1 1430899 21 + 1977891 I e cerAty1.NW_012004056v1 16391742 1075 - 16847902 I e rheMac8.chr2 2350249 21 - 204787373 I a score=26782.000000 s hg38.chr3_KI270934v1_alt 64737 7 + 163458 AGTCACA---- s panTro5.chr3 2536922 7 - 202621043 AGTCACA---- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127061 7 - 190779 AGTCACA---- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77976 7 - 106623 AGTCACA---- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853666 7 - 123690457 AGTCACG---- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350270 7 - 204787373 AGTCATG---- i rheMac8.chr2 I 21 C 0 s macFas5.chr2 192415458 7 - 192460366 AGTCATG---- i macFas5.chr2 I 1 C 0 s macNem1.NW_012014355v1 19155023 7 - 19675229 AGTCATG---- i macNem1.NW_012014355v1 I 21 C 0 s cerAty1.NW_012004056v1 16392817 7 - 16847902 AGTCATG---- i cerAty1.NW_012004056v1 I 1075 C 0 s chlSab2.chr15 91361723 7 + 91754291 AGTCATG---- i chlSab2.chr15 I 2 C 0 s manLeu1.NW_012102020v1 1430920 7 + 1977891 AGTCATG---- i manLeu1.NW_012102020v1 I 21 C 0 s colAng1.NW_012118932v1 7367593 7 - 7796314 AGTCATG---- i colAng1.NW_012118932v1 I 1 C 0 s calJac3.chr17 73842086 7 + 74750902 AGTCGCG---- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287816 7 - 17725628 AGTCGTG---- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6377958 7 + 6778120 AGTCGTG---- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 15470 7 + 69927 AGTCGTG---- i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88390376 4 + 114275543 AACT------- i micMur3.chr1 I 5 C 0 s otoGar3.GL873829 208886 4 + 608964 AACT------- i otoGar3.GL873829 I 2 C 0 s mm10.chr16 32789917 6 + 98207768 -GATGTA---- i mm10.chr16 I 2 I 2 s canFam3.chr33 2323408 4 - 31377067 AATC------- i canFam3.chr33 I 4 C 0 s dasNov3.JH569502 2703277 7 - 6579706 ----ACAAAAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14795975 336 - 22200726 I a score=271272.000000 s hg38.chr3_KI270934v1_alt 64744 17 + 163458 -TGTTTACATTGCAGAGA s panTro5.chr3 2536929 17 - 202621043 -TGTTTACATTGCAGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127068 17 - 190779 -TGTTTACATTGCAGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77983 17 - 106623 -TGTTTACCTTGCAGAGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853673 17 - 123690457 -TGTTTACATTGCAGAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350277 17 - 204787373 -TGTCTACACTGCAGAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415465 17 - 192460366 -TGTCTACACTGCAGAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19155030 17 - 19675229 -TGTCTACACTGCAGAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16392824 17 - 16847902 -TGTTTACACTGCAGAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361730 17 + 91754291 -TGTTTACATTGCAGAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1430927 17 + 1977891 -TGTTTACACTGCAGAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7367600 17 - 7796314 -TGTTTACACCACAGAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73842093 17 + 74750902 -TGTTCACATTGCAGAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287823 17 - 17725628 -TGTTTACATTGCCAAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6377965 17 + 6778120 -TGTTTACATCGCAGAGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 15477 17 + 69927 -TGTTCACATCGCAGAAA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88390380 17 + 114275543 -TGTTTACATTGCAGAGA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14796311 17 - 22200726 -TGTTTACTTTGCAGAGA i proCoq1.NW_012133858v1 I 336 C 0 s otoGar3.GL873829 208890 17 + 608964 -TGTTTACGCTGAAGAGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32789925 17 + 98207768 -TATTCACATGGCAGAAA i mm10.chr16 I 2 C 0 s canFam3.chr33 2323412 17 - 31377067 -TTTTTACGTAGCACAGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2703284 18 - 6579706 AATTTCACATTGCAAAGA i dasNov3.JH569502 C 0 C 0 a score=548029.000000 s hg38.chr3_KI270934v1_alt 64761 50 + 163458 AGG-AAAT-GAAGAACTCGGAGAAGGCAGGCAGAAGCAAAGCCAGGCAGAGA s panTro5.chr3 2536946 50 - 202621043 AGG-AAAT-GAAGAACTCGGAGAAGGCAGGCAGAAGCAAAGCCAGGCAGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127085 34 - 190779 AGG-AAAT-GAAGAACTCGGAGAAGG----------------CAGGCAGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78000 50 - 106623 AGG-AAAT-GAAGAACTCGGAGAAGGCAGGCAGAAGCAAAGCCAGGCAGAAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853690 48 - 123690457 AGG-AAAT-GAAGAACTCGGAGAAGGCA--CAGAAGCAAAGCCAGGCAGAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350294 50 - 204787373 AGG-AAAC-GAAGAACTCGGAGAAGGCAGGCAGAAGCAAAGCCAGGCAGAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415482 50 - 192460366 AGG-AAAC-GAAGAACTCGGAGAAGGCAGGCAGAAGCAAAGCCAGGCAGAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19155047 50 - 19675229 AGG-AAAC-GAAGAACTCGGAGAAGGCAGGCAGAAGCAAAGCCAGGCAGAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16392841 47 - 16847902 AGG-AAAC-GGAGAACTCGGAGAAG---GGCAGAAGCAAAGCCAGGCAGAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361747 50 + 91754291 AGG-AAAC-GAAGAACTCAGAGAAGGCAGGCAGAAGCAAAGCCAGGCAGAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1430944 50 + 1977891 AGG-AAAC-GAAGAACTCGGAGAAGGCAGGCAGAAGCAAAGCCAGGCAGAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7367617 50 - 7796314 AGG-AAAT-GAAGAACTCGGAGAAGGCAGACAGAAGCAAAGCCAGGCAGAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73842110 49 + 74750902 AGG-AAAT-GAGGAGCTCGGAGAAGGCCGGCAGAAGC-CAGCCAGGCAGGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287840 48 - 17725628 AGG-AAAT-GCGGGGCTCGGAGAAGGCCAGC-TAGGC-CAGCCAGGCAGGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6377982 49 + 6778120 AGG-AAAT-GTGGAGCTCGGAGAAGGCCGGCAGAAGC-CAGCCAGGCAGGGG i cebCap1.NW_016107444v1 C 0 I 31 s aotNan1.NW_018503669v1 15494 48 + 69927 AGG-AAAT-GAGGAGCTCGGAGAAGGCCGGCAGGAGC-CAGCCAGGCAGGG- i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88390397 51 + 114275543 AAGGGAAC-GAAGAACTCAGAGTAGACAGGCAGAAGCAAAGCTAAGCCGGGA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14796328 51 - 22200726 AGGTGAAT-GAAGAACTCAGGGAATGCAGGCAGAAGCAAAACTAGGCTGGGA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 208907 50 + 608964 AGGGGAAT-GAAAAAATCAAAGAAGCCAGGCAGCAGCAAA-TTCAGCGGGGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32789942 48 + 98207768 AGA-GATCAGAAGAACT--GAGAAGCTTGGCGAGATCAAAGCCAGGCAAGA- i mm10.chr16 C 0 C 0 s canFam3.chr33 2323429 51 - 31377067 AGGGGAAT-TCCCAACTCAGGAAAAATAGGCAGAAGCCAAGCCAAGCAGATA i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2703302 0 - 6579706 C a score=269869.000000 s hg38.chr3_KI270934v1_alt 64811 34 + 163458 TCCTCAGATTCAGCTCCCAATTCTCCGTAAGAAA s panTro5.chr3 2536996 34 - 202621043 TCCTCAGATTCAGCTCCTAATTCTCCATAAGAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127119 34 - 190779 TCCTCAGATTCAGCTCCTAATTCTCCATAAGAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78050 34 - 106623 TCCTCAGATTCAGCATCTAATTCTCCACAAGAAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853738 34 - 123690457 CCCTCAGATTCAGCTCCTAATTATCCGTAAGAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350344 34 - 204787373 TCCTCCGATGCAGCTCCCAATTCTCTGTAAGAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415532 34 - 192460366 TCCTCCGATGCAGCTCCCAATTCTCTGTAAGAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19155097 34 - 19675229 TCCTCCGATGCAGCTCCCAATTCTCTGTAAGAAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16392888 34 - 16847902 TCCTCCGATTCAGCTCCCAATTCTCGGTAAGAAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361797 34 + 91754291 TCCTCCGATTCAGCTCCCAATTCTCTGTAAGAAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1430994 34 + 1977891 TCCTCCGATTCAGCTCCCAATTCTCGGTAAGAAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7367667 34 - 7796314 TCCTCCGACTCAGCTCCTAATTCTCTGTAAGAAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73842159 31 + 74750902 -CCTCCTTCCCAAG-CCTCCTTCTCTGTAAGAG- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287888 31 - 17725628 -CCTCCGACCCAAC-CCTCATTCTCTGTGAGAA- i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 15542 32 + 69927 TCCTCCGACCCAGC-CCTCGCTCTCTGTAAGAA- i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88390448 34 + 114275543 TCCTAAAATTCAGCTCCTATTACTCCATAAGAAA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14796379 34 - 22200726 TCCTAAAATTCAGCCCCTATTACTCCATAAGAAA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 208957 34 + 608964 TCCTGAAATTCAGCTCCTAAAGCTCCGTAAGAAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32789990 16 + 98207768 -GCCCCTGTTCAGCCCT----------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2323480 18 - 31377067 --------TTTAGTTCCTAATACTCG-------- i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2703302 0 - 6579706 C e cebCap1.NW_016107444v1 6378031 31 + 6778120 I a score=571371.000000 s hg38.chr3_KI270934v1_alt 64845 48 + 163458 CGAGACTCCCTTCCAAGTGCGGTAGCTGCTCTTCTGTGTCCTGCGGGT s panTro5.chr3 2537030 48 - 202621043 CGAGACTCCCTTCCAAGTGCGGTAGCTGCTCTTCTGTGTCCTGCGGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127153 48 - 190779 CGAGACTCCCTTCCAAGTGCGGTAGCTGCTCTTCTGTGTCCTGCGGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78084 48 - 106623 CGAGACTCCCTTCCAAGTGCGGTAGCTGCTTTTCTGTGTCCTGCGGGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853772 48 - 123690457 CGAGACTCCCTTCCAAATGTGGTAGCTGCTCTTCTGTGTCCTGCGGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350378 48 - 204787373 CGAGACTCCCTTCCAAGTGCGGTAGCTGCTCTTCCGTGTCCCGCGGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415566 48 - 192460366 CGAGACTCCCTTCCAAGTGCGGTAGCTGCTCTTCCGTGTCCCGCGGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19155131 48 - 19675229 CGAGACTCCCTTCCAAGTGCGGTAGCTGCGATTCCGTGTCCCGCGGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16392922 48 - 16847902 AGAGACTCCCTTCCAAGTGCGGTAGCTGCTCTTCCGTGTCCCGCGGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361831 48 + 91754291 CGAGACTCCCTTCCAAGTGCGGTAGCTGCTCTTCTGTGTCCCGTGGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1431028 48 + 1977891 CGAGACTCCCTTCCAAGTGCGGCAGCTGCTCTTCCGTGTCCCGCGGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7367701 48 - 7796314 CGAGACTCCCTTCCAAGTGCGGTAGCTGCTCTTCTGTGTCCTGTGGGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73842190 47 + 74750902 CGAG-CTCCCTTCCATGTGCAGTGGTTGCTCTTTTGTGCCCCGCAGAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287919 48 - 17725628 CCAGACGCCCTTCCAAGTGCAGCGGCTGCTCCCCTGTGCCTGGCACAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6378062 48 + 6778120 CGAGACTCCCTTCCAAGCGTAGCGGCTGCTCCTTTGTGCCCCGCACAC i cebCap1.NW_016107444v1 I 31 C 0 s aotNan1.NW_018503669v1 15574 47 + 69927 CGAG-CTCCCTTCCAAGCGTAGTGGTTGCTTTTCCGTGCCCTGCAGAT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88390482 48 + 114275543 CAAGACTCCCTCCCAAGTGCCGTAGTTGCTCTTCTGTGTTCTGCAGGT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14796413 48 - 22200726 CAAGACTCCCTCCCAAGTGTAGTAGTTGCTCTTCTGTGGTCTGCAGAT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 208991 47 + 608964 CAAGGCTGCC-CTCACCTGTAGTAGTTGCTCGTCTGCGTTCTGCACAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32790006 43 + 98207768 ---AATGCCCTTTCA--TGGAGTCATTGACCTCCCTTGCCCTGAAGAT i mm10.chr16 C 0 C 0 e dasNov3.JH569502 2703302 0 - 6579706 C e canFam3.chr33 2323498 0 - 31377067 C a score=2430051.000000 s hg38.chr3_KI270934v1_alt 64893 165 + 163458 CT-TCCCTGCAGC-----CCCTGCGAACCTCGCCCCTTCCTCTACTCCCCTGGCCCGGAAAGTGCCCACTCACCTGCTGCATCAGCCTTTCTGCCACTCTGGGGTCAGTGAGGTCTTCCGGGGAAGCCACACTCAGCCGCAGGAGGAGGAAACCTCCATTTTCACCTGCAA s panTro5.chr3 2537078 165 - 202621043 CT-TCCCTGCAGC-----CCCTGCGAACCTCACCCCTTCCTCTACTCCCCTGGCCCGATAAGTGCCCACTCACCTGCTGCATCAGCCTTTCTGCCACTCTGGGGTCAGTGAGGTCTTCCAGGGAAGCCACACTCAGCCGCAGGAGGAGGAAACCTCCATTTTCACCTGCAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127201 165 - 190779 CT-TCCCTGCAGC-----CCCTGCGAACCTCACCCCTTCCTCTACTCCCCTGGCCCGATAAGTGCCCACTCACCTGCTGCATCAGCCTTTCTGCCACTCTGGGGTCAGTGAGGTCTTCCAGGGAAGCCACACTCAGCCGCAGGAGGAGGAAACCTCCATTTTCACCTGCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78132 164 - 106623 CT-TCCCTGCAG------CCCTGCGAACCTCACCCCTTCCTCTACTCCCCTGGCCCGGAAAGTGCCCACTCACCTGCTGCATCAGGCTTTCTGCCACTCTGGGGTCAGTGAGGTCTTCCAGGGAAGCCACACTCAGCCGCAGGAGGAGGAAACCTCCATTTTCACCTGCAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853820 165 - 123690457 CT-TCCCGGCAGC-----CCCTGCAAACCTCACCCCTTCCTCTACTGCCCTGGCCTGGAAAGTGCCTGCTCACCTGCTGCATCAGCCTTTCTGCCACTCTGGGGTCAGTGAGGTCTTCCAGGGAGGCCACACTCAGTCGCAGGAGAAGGAAGCCTCCATTTTCACCTGCGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350426 165 - 204787373 CT-TCCCGGCAGC-----CCCTGCAAACCTCACGCCTTCCTCTACTCCCCTGGCCCAGAAAGTGTCCACTCACCTGCTGCATCAGCCTCTCTGCCACTCTGGGGTCACTGAGGTCTTCCGGGGAGGCCACACTCAGCCGCAGGAGGAGGAAACCTACATTTTCACCTGCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415614 165 - 192460366 CT-TCCCGGCAGC-----CCCTGCAAACCTCACGCCTTCCTCTACTCCCCTGGCCCAGAAAGTGTCCACTCACCTGCTGCATCAGCCTCTCTGCCACTCTGGGGTCACTGAGGTCTTCCGGGGAGGCCACACTCAGCCGCAGGAGGAGGAAACCTACATTTTCACCTGCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19155179 165 - 19675229 CT-TCCCGGCAGC-----CCCTGCAAACCTCACGCCTTCCTCTACTCCCCTGGCCCAGAAAGTGTCCACTCACCTGCTGCATCAGCCTCTCTGCCACTCTGGGGTCACTGAGGTCTTCCGGGGAGGCCACACTCAGCCGCAGGAGGAGGAAACCTACATTTTCACCTGCAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16392970 165 - 16847902 CT-TCCCGGCAGC-----CCCTGCAAACCTCACGCCTTCCTCTACTCCCCTGGCCCAGAAAGTGTCCACTCACCTGCTGCATCAGCCTCTCTGCCACTCTGGGGTCACTGAGGTCTTCGGGGGAGGCCACACTCAGCCGCAGGAGGAGGAAACCTACATTTTCACCTGCAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91361879 165 + 91754291 CT-TCCCGGCAGC-----CCCTGCAAACCTCACGCCTTCCTCTACTCCCCTGGCCCAGAAAGTGTCCACTCACCTGCTGCATCAGCCTCTCTGCCACTCTGGGGTCAGTGAGGTCTTCCGGGGAGGCCACACTCAGCCGCAGGAGGAGGAAACCTACATTTTCACCTGCAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1431076 165 + 1977891 CT-TCCCGGCAGC-----CCCTGCAAACCTCACGCCTTCCTCTACTCCCCTGGCCCAGAAAGTGTCCACTCACCTGCTGCATCAGCCTCTCTGCCACTCTGGGGTCACTGAGGTCTTCCGGGGAGGCCACACTCAGCCGCAGGAGGAGGAAACCTACATTTTCACCTGCAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7367749 165 - 7796314 CT-TCCTGGCAGC-----CCCTGCAAACCTCACCCCTTCCTCTACTGCCCTGGTCCAGAAAGTGTCCACTCACCTGCTGCATCAGCCTCTCCGCCACTCTGGGGTCAGTGAGGTCTTCCGCGGAGGCCACACTCAGCCGCAGGAGGAGGAAACCTACATTTTCACCTGCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73842237 140 + 74750902 GT-TTCCTGCA-C-----CCCTGCCAACCTCACACCTTCCT------------------------CTACTCACCTGCTGCATCAGCCTCTCTGCCACTCTGGGATTAGTGAGGTCTTCCAGGGAGGCCACACTCAGCCGCAGGAGGAGGAAACCTACGTTTTCACCTGCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17287967 138 - 17725628 CT-TTCCTGCA-C-----CCCTGCGAACCTCACACCTTC--------------------------CTACTCACCTCCTGCACCAGCCTCTCTGCCACTCTGGGGTCGGTGAGGTCTTCCAGGGAGGCCACACTCAGCCTCAGGAGAAGGAAACCTGCATTTTCACCTGCAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6378110 137 + 6778120 CT-TTCCTGCA-------CCCTGCGAACCTCACAGCTTC--------------------------CTACTCACCTGCTGCACCAGGCTCTCTGCCACTCTGGGGTCAGTGAGGTCTTCCAGGGAGGCCACACTCAGCCGCAGGAGGAGGAAACCTACATTTTCACCTGCAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 15621 140 + 69927 CT-TTCCTGCA-C-----CCCTGCGAACCTCGCACCTCCCT------------------------CTACTCACCTGCTGCGTCAGCCTCTCTGCCACTCTGGGATCAGTGAGGTCTTCCAGGGAGGCCACGCTCAGCCGCAGGAGGAGGAAACCTACATTTTCACCTGCAA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88390530 165 + 114275543 CT-CCCCTGCAGT-----CCCTGGGGATCTCGCACTTTCCTCCACTGCCCTGGCCCAGACAGTGCCCACTCACCTGCTGCATGAACCTCTCTGCCACTCTGGGATCAGTGAGGTCTTCTGGGGAGGCCACACTCAGCCGCAGGAGGAGGAAGCCTCCATCTCCACCTGCAA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14796461 165 - 22200726 TT-CCCCTATAGT-----CCCTGAGAACCTCGCACTTTCCTCTACTCCCCTGACCCAGACAGTGCCCACTCACCTGCTGCACGAACCTCTCCGCCACTCTGGGGTCAGTGAGGTCTTCTGGGGAGACCACACTCAGCCTCAGGAGGAGGAAGCCTCCATCTCCACCTGCAA i proCoq1.NW_012133858v1 C 0 I 1161 s otoGar3.GL873829 209038 171 + 608964 CTCCCCCTATACCTCCCACCCCGAGAACCTCGCACTTCCCTCTACTCTGCTGGTCCAGAACATGCCCACTCACCTGCCACATGAACCTCTCTGCCACTCTGGGGTCGGTGAGGTCTTCTGGGGAGGCCACACTCAGCCGCAGAAGGAGGAAGCCTCCATTGCCACCTGCAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32790049 148 + 98207768 GC-TCCCTGGAGT-----TCCCAAGAGACCCTCACTTACTCCTG-----------------GTGTACATGTACCTGGTTCATCAGCTTCTCTCTGGCGTTGTGCTCAGTGAGGTCCTTAGGGGAGGCCACGGTCAGCCGTACAAGGAGGAAGCCTCCATCTTCACCTAAAA i mm10.chr16 C 0 C 0 s canFam3.chr33 2323498 133 - 31377067 -----------------------------------CTTCCT---CTTTCCTGGCCCCGAGAGTGCTCCCTTACCTGCTGCACCAGCCTCTCTGCCACTCTGGGGTCAGTGAGGTCTTCTGGGGAGGCCACACTCAGCCGCAGGAGGAAAAAGCCTCCATCCCCATCTGCGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2703302 155 - 6579706 TT-CCCCTAGGAT-----CCCCAAGGACCTCCCATGCTTCTCCACTCCTCT----------GCATCCACTTGCCTGCTGCATGAGCCTCTCTGCCACTCTGGGGTCAGTGAGGTCTTCTGGGGTGGCTACCCTCAGCTGCAGGAGGAGGAAGCCTTCATCCACACCAGCAA i dasNov3.JH569502 C 0 C 0 a score=152191.000000 s hg38.chr3_KI270934v1_alt 65058 11 + 163458 ATGGAGAACAG s panTro5.chr3 2537243 11 - 202621043 ATGGAGAACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127366 11 - 190779 ATGGAGAACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78296 11 - 106623 ATGGAGAACAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853985 11 - 123690457 ATGGAGAACAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350591 11 - 204787373 ATGGAGAACAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415779 11 - 192460366 ATGGAGAACAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19155344 11 - 19675229 ATGGAGAACAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16393135 11 - 16847902 ATGGAGAACAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91362044 11 + 91754291 ATGGAGAACAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1431241 11 + 1977891 ATGGAGAACAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7367914 11 - 7796314 ATGGAGAACAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73842377 11 + 74750902 ATGGAGGACAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17288105 11 - 17725628 ATGGAGGACAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6378247 11 + 6778120 ATGGAGGAAAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 15761 11 + 69927 ATGGAGGACAG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88390695 11 + 114275543 GTTGAGAACAG i micMur3.chr1 C 0 I 1703 s otoGar3.GL873829 209209 11 + 608964 GTTGAGAATAA i otoGar3.GL873829 C 0 I 3 s mm10.chr16 32790197 8 + 98207768 GTTGAGAA--- i mm10.chr16 C 0 C 0 s canFam3.chr33 2323631 11 - 31377067 GTTTAGGAAAG i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 2703457 11 - 6579706 ATTGAGAACAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I a score=105387.000000 s hg38.chr3_KI270934v1_alt 65069 8 + 163458 TAAGATGA s panTro5.chr3 2537254 8 - 202621043 TAAGACGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127377 8 - 190779 TAAGACGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78307 8 - 106623 TAAGATGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2853996 8 - 123690457 TAGGATGa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350602 8 - 204787373 TAAGATGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415790 8 - 192460366 TAAGATGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19155355 8 - 19675229 TAAGATGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16393146 8 - 16847902 TAAGATGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91362055 8 + 91754291 TAAGATGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1431252 8 + 1977891 TAAGATGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7367925 8 - 7796314 TAACATGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73842388 8 + 74750902 TAAGATGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17288116 8 - 17725628 TAAGATGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6378258 8 + 6778120 TGAGATGa i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 15772 8 + 69927 CAAGATGA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 209223 8 + 608964 GAAGATGA i otoGar3.GL873829 I 3 C 0 s mm10.chr16 32790205 7 + 98207768 -AAGACCA i mm10.chr16 C 0 C 0 s canFam3.chr33 2323644 8 - 31377067 GGAGATGA i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 2703468 8 - 6579706 TAAGAAGA i dasNov3.JH569502 C 0 I 1541 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e micMur3.chr1 88390706 1703 + 114275543 I a score=-12563.000000 s hg38.chr3_KI270934v1_alt 65077 2 + 163458 A-A s panTro5.chr3 2537262 2 - 202621043 A-A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127385 2 - 190779 A-A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78315 2 - 106623 A-A i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2854004 2 - 123690457 a-a i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350610 2 - 204787373 A-A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415798 2 - 192460366 A-A i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19155363 2 - 19675229 A-A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16393154 2 - 16847902 A-A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91362063 2 + 91754291 A-A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1431260 2 + 1977891 A-A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7367933 2 - 7796314 A-A i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73842396 1 + 74750902 A-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17288124 1 - 17725628 A-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6378266 2 + 6778120 aa- i cebCap1.NW_016107444v1 C 0 I 2214 s aotNan1.NW_018503669v1 15780 1 + 69927 A-- i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 209231 2 + 608964 A-A i otoGar3.GL873829 C 0 I 679 s mm10.chr16 32790212 2 + 98207768 G-A i mm10.chr16 C 0 C 0 s canFam3.chr33 2323652 2 - 31377067 G-A i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I a score=94425.000000 s hg38.chr3_KI270934v1_alt 65079 11 + 163458 ATCAGggctgg s panTro5.chr3 2537264 11 - 202621043 ATCAGggctgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127387 11 - 190779 ATCAGggctgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78317 11 - 106623 ATCAGggctgg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2854006 11 - 123690457 atcagggctgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350612 11 - 204787373 ATCAGggctgg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415800 11 - 192460366 ATCAGggctgg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19155365 11 - 19675229 ATCAGggctgg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16393156 11 - 16847902 ATCAGggctgg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91362065 11 + 91754291 ATCAGggctgg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1431262 11 + 1977891 ATCAGggctgg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7367935 11 - 7796314 ATCAGggctgg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73842397 11 + 74750902 ATTGGGgccag i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17288125 11 - 17725628 ATCGGGgccag i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 15781 11 + 69927 CTCGGGgccag i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32790214 6 + 98207768 -----GGCAAT i mm10.chr16 C 0 C 0 s canFam3.chr33 2323654 11 - 31377067 ACGTGGGTCAG i canFam3.chr33 C 0 I 1536 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e otoGar3.GL873829 209233 679 + 608964 I a score=111516.000000 s hg38.chr3_KI270934v1_alt 65090 13 + 163458 g----cgcagtggctca s panTro5.chr3 2537275 13 - 202621043 g----cgcagtggctca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127398 13 - 190779 g----cgcagtggctca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78328 13 - 106623 g----cgcagtggctca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2854017 13 - 123690457 g----cgcggtggctca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350623 13 - 204787373 g----ggcggtggctca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415811 13 - 192460366 g----ggcggtggctca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19155376 13 - 19675229 g----ggcggtggctca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16393167 13 - 16847902 g----ggcggtggctca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91362076 13 + 91754291 g----tgtggtggctca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1431273 13 + 1977891 g----ggcggtggctca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7367946 13 - 7796314 g----cgcggtggctca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73842408 13 + 74750902 g----tgtggtggctca i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17288136 13 - 17725628 g----tgtggtggctca i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 15792 13 + 69927 g----tgtggtggctca i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32790220 17 + 98207768 GCAACCACAGTGACTCA i mm10.chr16 C 0 I 1400 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I a score=88085.000000 s hg38.chr3_KI270934v1_alt 65103 13 + 163458 c--------acctgtcatccc s panTro5.chr3 2537288 13 - 202621043 c--------acctgtcatccc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127411 13 - 190779 c--------acctgtcatccc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78341 13 - 106623 c--------acctgtcatccc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2854030 13 - 123690457 c--------acctgtcatccc i nomLeu3.chr11 C 0 I 293 s rheMac8.chr2 2350636 13 - 204787373 c--------gcctgtaatccc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415824 13 - 192460366 c--------gcctgtaatccc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19155389 13 - 19675229 c--------gcctgtaatccc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16393180 21 - 16847902 caggctggggcctgtaatccc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91362089 13 + 91754291 c--------gcctataatccc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1431286 13 + 1977891 c--------gcctgtaatccc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7367959 13 - 7796314 c--------gcctgtaatccc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73842421 13 + 74750902 c--------gcctgttgtccc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17288149 12 - 17725628 c--------acctgttat-gc i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 15805 13 + 69927 c--------gcctgttatccc i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I a score=25812.000000 s hg38.chr3_KI270934v1_alt 65116 3 + 163458 agc s panTro5.chr3 2537301 3 - 202621043 agc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127424 3 - 190779 agc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78354 3 - 106623 agc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2854336 3 - 123690457 agc i nomLeu3.chr11 I 293 C 0 s rheMac8.chr2 2350649 3 - 204787373 agt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415837 3 - 192460366 agt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19155402 3 - 19675229 agt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16393201 3 - 16847902 agc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91362102 3 + 91754291 agc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1431299 3 + 1977891 agc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7367972 3 - 7796314 agc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73842434 3 + 74750902 agc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17288161 3 - 17725628 agc i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 15818 3 + 69927 agc i aotNan1.NW_018503669v1 C 0 I 2097 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I a score=321302.000000 s hg38.chr3_KI270934v1_alt 65119 48 + 163458 actttgggaggcagaggcaggtggatcacctgagatcgggagtttgag s panTro5.chr3 2537304 48 - 202621043 actttgggaggctgaggcaggtggatcacctgagatcgggagtttgag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127427 48 - 190779 actttgggaggctgaggcaggtggatcacctgagatcgggagtttgag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78357 48 - 106623 actttgggaggctgaggcaggtggatcacctgagatcgggagtttgag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2854339 48 - 123690457 actttgggaggccgaggcaggtggatcacctgaggttgggagtttgag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350652 48 - 204787373 actttgggagggcgaggcaggtggatcacctgaggtcaggagttcgag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415840 48 - 192460366 actttgggagggcgaggcaggtggatcacctgaggtcaggagttcgag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19155405 48 - 19675229 actttgggagggcgaggcaggtggatcacctgagatcaggagttcgag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16393204 48 - 16847902 actttgggagggcgaggcaggtggatcacctgaggtcaggagttcgag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91362105 48 + 91754291 actttgggagggcaaggcaggtggatcacctgaggtcaggagttcgag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1431302 48 + 1977891 actttgggagggcgaggcaggtgggtcacctgaggtcaggagttcgag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7367975 48 - 7796314 actttgggaggccgaggcaggtggattacctgaggtcaggagttcgag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73842437 48 + 74750902 tactcaggaggctcaggtgggaggatcacctgagccctggaggtggag i calJac3.chr17 C 0 I 2048 s saiBol1.JH378146 17288164 48 - 17725628 tactcaggaggctcaggtgggaggatcacctgagccctggaagtggag i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I a score=13434.000000 s hg38.chr3_KI270934v1_alt 65167 2 + 163458 ac s panTro5.chr3 2537352 2 - 202621043 ac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127475 2 - 190779 ac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78405 2 - 106623 ac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2854387 2 - 123690457 ac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350700 2 - 204787373 ac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415888 2 - 192460366 ac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19155453 2 - 19675229 ac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16393252 2 - 16847902 ac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91362153 2 + 91754291 ac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1431350 2 + 1977891 ac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7368023 2 - 7796314 ac i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17288212 2 - 17725628 gc i saiBol1.JH378146 C 0 I 1973 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e calJac3.chr17 73842485 2048 + 74750902 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I a score=679247.000000 s hg38.chr3_KI270934v1_alt 65169 136 + 163458 cagcctgaccaacatgga-gaaatcccgtctttactaaaaacac-aaaatgagccgggcatggtggtgcgtgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcctgaacctgggaggcggaggttg s panTro5.chr3 2537354 136 - 202621043 cagcctgaccaacatgga-gaaatcccgtctttactaaaaatac-aaaatgagccgggcatggtggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcctgaacctgggaggcggaggttg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127477 136 - 190779 cagcctgaccaacatgga-gaaatcccgtctttactaaaaatac-aaaatgagccgggcatggtggcgcgtgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcctgaacctgggaggcggaggttg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78407 135 - 106623 cagcctga-caacatgga-gaaatcccgtctttactaaaaacac-aaaatgagccgggcatggtggtgcgtgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcctgaacctgggaggcggaggttg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2854389 136 - 123690457 cagcctgacgaacatgga-gaaaccccgtctttactaaaaatac-aaaatgagccgggcatggtggtgcatgcctgtaatcccagctactcaggaggcggaggcaggagaatcgcctgaacctgggaggcagaggttg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350702 138 - 204787373 cagcctggccagcatagtagaaaccctgtctctactaaaaatacaaaaatgagctgggtgtggtggctcacgcctgtcattccagctactcaggaggctgaagtgggaggatcatctgagccctggaggtggaggttg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192415890 138 - 192460366 cagcctggccagcatagtagaaaacctgtctctactaaaaatacaaaaatcagctgggtgtggtggctcacgcctgtcattccagctactcaggaggctgaagtgggaggatcatctgagccctggaggtggaggttg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19155455 138 - 19675229 cagcctggccagcatagtagaaaccctgtctctactaaaaatacaaaaatcagctgggtgtggtggctcacgcctgtcattccagctactcaggaggctgaagtgggaggatcatctgagccctggaggtggaggttg i macNem1.NW_012014355v1 C 0 I 953 s cerAty1.NW_012004056v1 16393254 138 - 16847902 cagcctggccagtatagtagaaaccctgtctctactaaaaatacaaaaatcagctgggcgtggtggctcacgcctgtcattccagctactcaggaggctgaagtgggaggatcacctgagccctggaggtggaggttg i cerAty1.NW_012004056v1 C 0 I 972 s chlSab2.chr15 91362155 137 + 91754291 cagcctggccagcatggt-gaaaccctgtctctactaaaaatacaaaaatcagctggacgtggtggctcacgcctgtcattccagctactcaggaggctgaagtgggaggatcatctgagccctggaggtggaggttg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1431352 137 + 1977891 cagcctggccagcatggt-gaaaccctgtctctactaaaaatacaaaaatcagctgggcgtggtggctcacgcctgtcattccagctactcaggaggctgaagtgggaggatcacctgagccctggaggtggaggttg i manLeu1.NW_012102020v1 C 0 I 1199 s colAng1.NW_012118932v1 7368025 137 - 7796314 cagcctggccagcatggt-gaaaccctgtctctactaaaaatgcaaaaatcggctgggcgtggtggctcacacctgtcattccagctactcaggaggctgaggtgggaggatcacctgagccctggaggtggaggttg i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e saiBol1.JH378146 17288214 1973 - 17725628 I e calJac3.chr17 73842485 2048 + 74750902 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I a score=100323.000000 s hg38.chr3_KI270934v1_alt 65305 38 + 163458 tggtgatctgagatcgcagcactacactccaacctggg s panTro5.chr3 2537490 38 - 202621043 tggtgatctgagatcgcagcactacactccaacctggg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127613 38 - 190779 tggtgatctgagatcgcagcactacactccaacctggg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78542 38 - 106623 tggtgatctgagatcgcagcactacactccaacctggg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2854525 38 - 123690457 tggtgagctgagatcgcagcattacactccagcctggg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2350840 38 - 204787373 cagtgagtcgagatcacaccactgcactccagcctggg i rheMac8.chr2 C 0 I 923 s macFas5.chr2 192416028 38 - 192460366 cagtgagtcgagatcacgccactgcactccagactggg i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91362292 38 + 91754291 cagtgagtcgagatcacgccactgcactccagcctggg i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7368162 38 - 7796314 cagtgagtcgagatcacgccactgcactccagcctggg i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e saiBol1.JH378146 17288214 1973 - 17725628 I e calJac3.chr17 73842485 2048 + 74750902 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I a score=47436.000000 s hg38.chr3_KI270934v1_alt 65343 33 + 163458 caacaagagcgaaa--ctgtctc---------------------aaaaaaaaaaaa s panTro5.chr3 2537528 34 - 202621043 caacaagagcgaaa--ctgtctc--------------------aaaaaaaaaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127651 30 - 190779 caacaagagcgaaa--ctgtctc------------------------aaaaaaaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78580 35 - 106623 caacaagagcgaaactctgtctc---------------------aaaaaaaaaaaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2854563 56 - 123690457 caacaagagcgaaactctttctcaaaaaacaaaaaaaaaaaccaaaaaaaaaaaaa i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192416066 34 - 192460366 tgac-agagtgagactccatctc---------------------aaaaaaaaaaaa i macFas5.chr2 C 0 I 737 s chlSab2.chr15 91362330 34 + 91754291 tgac-agagtgagactccatctc---------------------aaaaaaaaaaaa i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7368200 34 - 7796314 tgac-agagtgagactctgtctc---------------------aaaaaaaaaaaa i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e saiBol1.JH378146 17288214 1973 - 17725628 I e calJac3.chr17 73842485 2048 + 74750902 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e rheMac8.chr2 2350878 923 - 204787373 I a score=9555.000000 s hg38.chr3_KI270934v1_alt 65376 5 + 163458 aaaaa s panTro5.chr3 2537562 5 - 202621043 aaaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127681 5 - 190779 aaaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78615 5 - 106623 aaaaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2854619 5 - 123690457 aaaaa i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91362364 5 + 91754291 aaaaa i chlSab2.chr15 C 0 I 850 s colAng1.NW_012118932v1 7368234 5 - 7796314 aaaaa i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e saiBol1.JH378146 17288214 1973 - 17725628 I e calJac3.chr17 73842485 2048 + 74750902 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e macFas5.chr2 192416100 737 - 192460366 I e rheMac8.chr2 2350878 923 - 204787373 I a score=4095.000000 s hg38.chr3_KI270934v1_alt 65381 3 + 163458 aaa s panTro5.chr3 2537567 3 - 202621043 aaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127686 3 - 190779 aaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78620 3 - 106623 aaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2854624 3 - 123690457 aaa i nomLeu3.chr11 C 0 C 0 s colAng1.NW_012118932v1 7368239 3 - 7796314 aaa i colAng1.NW_012118932v1 C 0 I 843 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e saiBol1.JH378146 17288214 1973 - 17725628 I e calJac3.chr17 73842485 2048 + 74750902 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e chlSab2.chr15 91362369 850 + 91754291 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e macFas5.chr2 192416100 737 - 192460366 I e rheMac8.chr2 2350878 923 - 204787373 I a score=1062027.000000 s hg38.chr3_KI270934v1_alt 65384 1213 + 163458 gaggaggatgaaatagtcacatatatttgcttccgtatgtacatttcatgtgcag-aaaattacacacaagagacaatctcacgggttacatgtgtggagagaa---ctgggtgggggcacagccaggggagaaaggcattttatggtgaaccttttcgtacctttccatttcaaatcatatgaatgtcttatctaatcaacaaataataaaGTATTTTTCTTTCCagggaaaagaaggagcgatcagactgtcactgtgtctctgtagaaaggaaagacat--gagactccattttgaaaaagacctgtactttaaacaagctttgctgagatgttgttaatttgtaactttgccccaaccttgagctcataaaaacatgtgttgtataaaatcaaggtttaagggatctagggctgtgcaggacgtgccttgttaacaaaatgtttacaagcagtatacttggtaaaagtcatcgccattctctagtctcaataaaccaggggcacaatgcactgtggaaagccgcagggacctctgcccttgaaagcagggtattgtccaagctttctccccatgtgatagtctgaaatatggcctcgtgggatgacaaagacctgaccgtcccccaggctgacacccgtaaagggtctgtgctgaggtggattagtaaaagaggaaagtctcttgcagttgagatagaggaaggccactgtctcctgcctgcccctgggaactgaatgtctcggtataaaacccgattgtacatttgttcaattctgagacaggag-aaaaaccaccctgtggcgggaggtgagacatgtttgcagcaatgctgctttattattctttactctgctgagatgtttgggtggagagaaacataaatctggcctacgtgcacatccaggcatagtatcttcccttgaacttaattatgacacagattcttttgctcacatgtttcttgctgaccttctccttattatcaccctgctctcctactacattcctttttgctaaaataatgaaaataataatcaataaaaactgagaaaactcagagactggtgccggtgcaggtccttggtatgctgagcgccggtcccctgggcccactgttgtttctctatactttgtctctgtgccttatttcttttctcagtctctcatcccacccgactagaaatacccacaggtgtggaggggcaggccacccc s panTro5.chr3 2537570 1213 - 202621043 gaggaggatgaaatagtcacatatatttgcttccgtatgtacatttcatgtgcag-aaaattacacacaagagacaatctcacgggttacatgtgtggagcgaa---ctgggtgagggcacagccaggggagaaaggcattttatggtgaaccttttcgtacctttccatttcaaatcatatgaatgtcttatctaatcaacaaataataaaGTATTTTTCTTTCCagggaaaagaaggagcgatcagactgtcactgtgtctatgtagaaaggaaagacat--gagactccattttgaaaaagacctgtactttaaacaagctttgctgagatgttgttcatttgtaactttgccccaaccttgagctcataaaaacatgtgttgtataaaatcaaggtttaagggatctagggctgtgcaggacgtgccttgttaacaaaatgtttacaggcagtatacttggtaaaagtcatcgccattctctagtctcaataaaccaggggcacaacgcactgtggaaagccgcagggacctctgcccttgaaagcagggtattgtccaaggtttctccccatgtgatagtctgaaatatggcctcgtgggatgagaaagacctgaccgtcccccaggctgacacccgtaaagggtctgtgctgaggtggattagtaaaagaggaaagcctcttgcagttgagatagaggagcgccactgtcttctgcctgcccctgggaactgaatgtctcggtataaaacctgattgtacatttgttcaattctgagataggag-aaaaaccgccctgtggcgggaggtgagacatgtttgcagcaatgctgctttattattcttcactccgctgagatgtttgggtggggagaaacataaatctggcctacgtgcacatccaggcatagtatcttcccttgaacttaattatgacacagattcttttgctcacatgttttttgctgaccttctccttattatcaccctgctctcctactacattcctttttgctaaaataatgaaaataataatcaataaaaactgagaaaactcagagaccggtgccggtgcaggtccttggtatgctgagcaccggtcccctgggcccactgttgtttctctatactttgtctctgtgccttatttcttttctcagtctctcatcccacccgactagaaatacccacaggtgtggaggggcaggccacccc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127689 1210 - 190779 gaGGAGGATGaaatagtcacatatatttgcttccgtatgtacatttcatgtgcag-aaaattacacacaagagacaatctcacgggttacatgtgtggagagaa---ctgggtgagggcacagccaggggagaaaggcattttatggtgaaccttttcgtacctttccatttcaaatcatatgaatgtcttatctaatcaacaaataataaaGTATTTTTCTTTCCagggaaaagaagga---cacagactgtcactgtgtctatgtagaaaggaaagacat--gagactccattttgaaaaagacctgtactttaaacaagctttgctgagatgttgttcatttgtaactttgccccaaccttgagctcataaaaacatgtgttgtataaaatcaaggtttaagggatctagggctgtgcaggacgtgccttgttaacaaaatgtttacaagcagtatacttggtaaaagtcatcgccattctctagtctcaataaaccaggggcacaccgcactgtggaaagccgcagggacctctgcccttgaaagcagggtattgtccaaggtttctccccatgtgatagtctgaaatatggcctcgtgggatgagaaagacctgaccatcccccaggctgacacccgtaaagggtctgtgctgaggtggattagtaaaagaggaaagcctcttgcagttgagatagaggagcgccactgtcttctgcctgcccctgggaactgaatgtctcggtataaaacccgattgtacatttgttcagttctgagataggag-aaaaaccgccctgtggcgggaggtgagacatgtttgcagcaatgctgctttattattcttcactccgctgagatgtttgggtggggagaaacataaatctggcctacgtgcacatccaggcatagtatcttcccttgaacttaattatgacacagattcttttgctcacatgttttttgctgaccttctccttattatcaccctgctctcctactacattcctttttgctaaaataatgaaaataataatcaataaaaactgagaaaactcagagaccggtgccggtgcaggtccttggtatgctgagcaccggtcccctgggcccactgttgtttctctatactttgtctctgtgccttatttcttttctcagtctctcatcccacccgactagaaatacccacaggtgtggaggggcaggccacccc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 78623 1212 - 106623 GAGGAGGATGACATAGTCacatatatttgcttccgtatgtacatttcatgtgcagaaaaattacacacaagagacaatctcatgggttacatgtgtggagagag---ctgggtgggggcacagccaggggagaaagacattttatggtgaacctttttgtacctttccatttcaaatcatatgaatgtcttatctaatcaacaaataataaaGTATTTTTCTTTCCagggaaaagaaggagcgatcagactgtcactgtgtctatgtagaaaggaaagacat--gagactccattttgaaaaagacctgtactttaaacaagctttgctgagatgttgttaatttgtaactttgccccaactttgagctcacaaaaacatgtgttgtatggaatcaaggtttaagggatctagggctgtgcaggacgtgccttattaacaaaatgtttacaagcagtatacttggtaaaagtcatcaccattctctagtctcaataaaccaggggcacaatgcaccgtggaaagccgcagggacctctgcccttgaaagccaggtattgtccaaggtttctccccatgtgatagtctgaaatatggcctcgtgggatgagaaagacctgaccgtcccccagcctgacacccgtaaagggtctgtgctgaggtggattagtaaaagaggagaacctcttgcagttgagatagaggagggccactgtctcctgcctgcccctgggaactgaatgtctcggtataaaacc-gattgtacatttgttcaattctgagacaggagaaaaaaccgccctgtggcgggaggtgagacatgtttgcagcaatgctgctttattattctttactctgctgagatgtttgggtggagagaaacataaatctgccctacgtgcacatccaggcatagtatcttcccttgaacttaattatgacacagattcttttgctcacatgttttttgctgaccttctccttattatcaccctgctctcctactacattcctttttgctaaaataatgaaaataataatcaataaaaactgagaaaactcagagactggtgccggtgcaggtccttggtatgctgagcgccggtcccctgggcccactgttgtttctctatactttgtctctgtgccttatttcttttctcagtctctcat-ccacccgactagaaatacccacaggtgtggaggggcaggcca-ccc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2854627 1208 - 123690457 gaggaggatgaaatagacacatatatttgcttccgtatgtacatttcatatgcag-aaaatgacgcacaagaggcaaccccacgggttacatgtgtgaagagaagtgccgggtgggggcacggccagggcagaaagacatttaatggtgtacctttttgtacctttccatttccaatcatatgagtgtcttatctaatcaacaaataaT-AAGTATTTTTCTTTCCagggaaaagaaggagcgatcagactgtcactgtgtctatgtcgaaaggaaagacgtgagagactccattttgaaaaagacctgtactttaaacaagctttgctgagatgttgttaatttgtagctttgccccaacctcgagctcacagaaacatgtgttgtataaaatcaaggtttaagggatctagggctgtgcaggacgtgccttgttaacaaaatgtttacaggcagtatacttggtaaaagtcatctccattctctagtctcaataaaccaggggcaccatgcactgtggaaagccgcagggacctctgccctggaaagcgggatattgtcccaggtttctccccatgtgatagtctgaaatatggcctcgtgggatgagaaagacctgaccgtcccccagcctgacacccgtaaagggtctgtgctgaggtggattagtaaaagaggaaagcctcttgcagttgagagagaggaaggccactgtctcctgcctgcccctgggaactgaatgtctcggtataaaacccgatcgcatatttgctcaattctgagatag----aaaaaccgccctgtggtgggaggcgagacatgttggcagcaatgctgccttgttattctttactccactgagatgtttgggtggagagaaacataaatctggcctacgtgcacgtccaggcatagtaccttcccttgaacttaattatgacatagattcttttgctcacatgttttttgctgac---ctccttattatcaccctgctctcctactacattcctttttgctgaaataatgaaaataataatcaataaaaactgagggaactcagaggccggtgctggtgcaggtccttggtgtgctgagcgccggtcccctgggcccactgttgtttctctatactttgtctctgtgtcttatttcttttct--gtctcttgt-ccacccaactagaaatacccacagctgtggaggggcaggccacccc i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e saiBol1.JH378146 17288214 1973 - 17725628 I e calJac3.chr17 73842485 2048 + 74750902 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e colAng1.NW_012118932v1 7368242 843 - 7796314 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e chlSab2.chr15 91362369 850 + 91754291 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e macFas5.chr2 192416100 737 - 192460366 I e rheMac8.chr2 2350878 923 - 204787373 I a score=125175.000000 s hg38.chr3_KI270934v1_alt 66597 95 + 163458 ttcaCTTTCCAGAGCAGTTTAGCTACCAtcttcaaccctgtcagatggggtcgtgttacccacctcctaaggctgttttgaaggttaaatagagg s panTro5.chr3 2538783 95 - 202621043 ttcaCTTTCCAGGGCAGTTTAGCTACCATCTTTAACCctgtcagatggggtcgtgttacccacctcctaaggctgttttgaaggttaaatagagg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128899 95 - 190779 ttcaCTTTCCAGGGCAGTTTAGCTACCATCTTTAACCctgtcagatggggtcgtgttacccacctcctaaggctgttttgaaggttaaatagagg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 79835 93 - 106623 ttCACTTTCCAGGGCAGTTTAGCTACCATCTTTAACCctgtcagatggggtcgtgtta-ccacctcctaaggctg-tttgaaggttaaatagagg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2855835 95 - 123690457 ttcaCTTTCCAGGGCAGTTTAGCTACCATCTTTAACCctgtcagatggggtcgtgttacccacctcataaggctgttttgaaggttaaatagagg i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192416837 95 - 192460366 TTTTCTTTCCAGGGCAGTTTAGCTACCATCTTTAACCctgtcagatgcggtcgtgttacccacctcctaaggctgttttgaaggttaaatagagg i macFas5.chr2 I 737 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e saiBol1.JH378146 17288214 1973 - 17725628 I e calJac3.chr17 73842485 2048 + 74750902 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e colAng1.NW_012118932v1 7368242 843 - 7796314 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e chlSab2.chr15 91362369 850 + 91754291 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e rheMac8.chr2 2350878 923 - 204787373 I a score=10305.000000 s hg38.chr3_KI270934v1_alt 66692 19 + 163458 agataacatatgcaaagct s panTro5.chr3 2538878 19 - 202621043 agataacatatgtaaagct i panTro5.chr3 C 0 I 23 s gorGor5.CYUI01000576v1 79928 19 - 106623 agataacatatgcaaagct i gorGor5.CYUI01000576v1 C 0 T 69430 s nomLeu3.chr11 2855930 19 - 123690457 agataacatatgcaaagct i nomLeu3.chr11 C 0 I 24 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e saiBol1.JH378146 17288214 1973 - 17725628 I e calJac3.chr17 73842485 2048 + 74750902 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e colAng1.NW_012118932v1 7368242 843 - 7796314 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e chlSab2.chr15 91362369 850 + 91754291 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e macFas5.chr2 192416932 0 - 192460366 C e rheMac8.chr2 2350878 923 - 204787373 I e panPan2.chrUn_NW_014024201v1 128994 0 - 190779 C a score=0.000000 s hg38.chr3_KI270934v1_alt 66711 21 + 163458 ggtggcacactgcctggcaTC e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e saiBol1.JH378146 17288214 1973 - 17725628 I e calJac3.chr17 73842485 2048 + 74750902 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e colAng1.NW_012118932v1 7368242 843 - 7796314 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e chlSab2.chr15 91362369 850 + 91754291 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e macFas5.chr2 192416932 0 - 192460366 C e rheMac8.chr2 2350878 923 - 204787373 I e nomLeu3.chr11 2855949 24 - 123690457 I e gorGor5.CYUI01000576v1 79947 69430 - 106623 T e panPan2.chrUn_NW_014024201v1 128994 0 - 190779 C e panTro5.chr3 2538897 23 - 202621043 I a score=273.000000 s hg38.chr3_KI270934v1_alt 66732 1 + 163458 A s panTro5.chr3 2538920 1 - 202621043 A i panTro5.chr3 I 23 C 0 s gorGor5.CYUI01000576v1 10517 1 - 106623 A i gorGor5.CYUI01000576v1 T 69430 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e saiBol1.JH378146 17288214 1973 - 17725628 I e calJac3.chr17 73842485 2048 + 74750902 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e colAng1.NW_012118932v1 7368242 843 - 7796314 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e chlSab2.chr15 91362369 850 + 91754291 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e macFas5.chr2 192416932 0 - 192460366 C e rheMac8.chr2 2350878 923 - 204787373 I e nomLeu3.chr11 2855949 24 - 123690457 I e panPan2.chrUn_NW_014024201v1 128994 0 - 190779 C a score=22387.000000 s hg38.chr3_KI270934v1_alt 66733 40 + 163458 TAACATATGCAAAGCTGGTGGCACACTGCCTGGCATCAGA s panTro5.chr3 2538921 40 - 202621043 TAACATATGCAAAGCTGGTGGTACACTGCCTGGCatcaga i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 10518 40 - 106623 TAACATATGCAAAGCTGGTGGTACACTGCCTGGCatcaga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2855973 40 - 123690457 taaCATATGCAAAGCTGGTGGCACACTGCCTGGCATCAGA i nomLeu3.chr11 I 24 T 40 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e saiBol1.JH378146 17288214 1973 - 17725628 I e calJac3.chr17 73842485 2048 + 74750902 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e colAng1.NW_012118932v1 7368242 843 - 7796314 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e chlSab2.chr15 91362369 850 + 91754291 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e macFas5.chr2 192416932 0 - 192460366 C e rheMac8.chr2 2350878 923 - 204787373 I e panPan2.chrUn_NW_014024201v1 128994 0 - 190779 C a score=19689.000000 s hg38.chr3_KI270934v1_alt 66773 35 + 163458 TAACATATGCAAAGCTGGTGGTACACTGCCTGGCA s panTro5.chr3 2538961 35 - 202621043 taacatatgcaaagctggtggcacactgcctggca i panTro5.chr3 C 0 T 99 s gorGor5.CYUI01000576v1 10558 35 - 106623 taacatatgcaaagctggtggcacactgcctggca i gorGor5.CYUI01000576v1 C 0 I 69354 s nomLeu3.chr11 2855973 35 - 123690457 taaCATATGCAAAGCTGGTGGCACACTGCCTGGCA i nomLeu3.chr11 T 40 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e saiBol1.JH378146 17288214 1973 - 17725628 I e calJac3.chr17 73842485 2048 + 74750902 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e colAng1.NW_012118932v1 7368242 843 - 7796314 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e chlSab2.chr15 91362369 850 + 91754291 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e macFas5.chr2 192416932 0 - 192460366 C e rheMac8.chr2 2350878 923 - 204787373 I e panPan2.chrUn_NW_014024201v1 128994 0 - 190779 C a score=473.000000 s hg38.chr3_KI270934v1_alt 66808 5 + 163458 TCAGA s nomLeu3.chr11 2856008 5 - 123690457 TCAGA i nomLeu3.chr11 C 0 I 2337 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e saiBol1.JH378146 17288214 1973 - 17725628 I e calJac3.chr17 73842485 2048 + 74750902 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e colAng1.NW_012118932v1 7368242 843 - 7796314 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e chlSab2.chr15 91362369 850 + 91754291 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e macFas5.chr2 192416932 0 - 192460366 C e rheMac8.chr2 2350878 923 - 204787373 I e gorGor5.CYUI01000576v1 10593 69354 - 106623 I e panPan2.chrUn_NW_014024201v1 128994 0 - 190779 C e panTro5.chr3 2538996 99 - 202621043 T a score=0.000000 s hg38.chr3_KI270934v1_alt 66813 56 + 163458 TAACATATGCAAAGCTGGTGGTATACTGCCTGGCatcagataacatatgcaaagcc e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e saiBol1.JH378146 17288214 1973 - 17725628 I e calJac3.chr17 73842485 2048 + 74750902 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e colAng1.NW_012118932v1 7368242 843 - 7796314 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e chlSab2.chr15 91362369 850 + 91754291 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e macFas5.chr2 192416932 0 - 192460366 C e rheMac8.chr2 2350878 923 - 204787373 I e nomLeu3.chr11 2856013 2337 - 123690457 I e gorGor5.CYUI01000576v1 10593 69354 - 106623 I e panPan2.chrUn_NW_014024201v1 128994 0 - 190779 C e panTro5.chr3 2538996 99 - 202621043 T a score=5867.000000 s hg38.chr3_KI270934v1_alt 66869 21 + 163458 ggtggcacactgcctggcaTC s panTro5.chr3 2538897 21 - 202621043 ggtggcacactgcctggcaTC i panTro5.chr3 T 99 C 0 s gorGor5.CYUI01000576v1 79947 21 - 106623 ggtggcgcactgcctggcaTC i gorGor5.CYUI01000576v1 I 69354 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e saiBol1.JH378146 17288214 1973 - 17725628 I e calJac3.chr17 73842485 2048 + 74750902 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e colAng1.NW_012118932v1 7368242 843 - 7796314 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e chlSab2.chr15 91362369 850 + 91754291 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e macFas5.chr2 192416932 0 - 192460366 C e rheMac8.chr2 2350878 923 - 204787373 I e nomLeu3.chr11 2856013 2337 - 123690457 I e panPan2.chrUn_NW_014024201v1 128994 0 - 190779 C a score=15571.000000 s hg38.chr3_KI270934v1_alt 66890 19 + 163458 AGATAACATATACAAAGCC s panTro5.chr3 2538918 19 - 202621043 AGATAACATATGCAAAGCT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 79968 19 - 106623 AGATAACATATGCAAAGCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2858350 19 - 123690457 agataacatatgcaaagct i nomLeu3.chr11 I 2337 T 2420 s macFas5.chr2 192416932 19 - 192460366 agataacatacacgaagct i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e saiBol1.JH378146 17288214 1973 - 17725628 I e calJac3.chr17 73842485 2048 + 74750902 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e colAng1.NW_012118932v1 7368242 843 - 7796314 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e chlSab2.chr15 91362369 850 + 91754291 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e rheMac8.chr2 2350878 923 - 204787373 I e panPan2.chrUn_NW_014024201v1 128994 0 - 190779 C a score=16709.000000 s hg38.chr3_KI270934v1_alt 66909 21 + 163458 GGTGGCACACTGCCTGGCatc s panTro5.chr3 2538937 21 - 202621043 GGTGGTACACTGCCTGGCatc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 79987 21 - 106623 GGTGGTACACTGCCTGGCatc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2855949 21 - 123690457 gatggcacactgcctggcatc i nomLeu3.chr11 T 2420 C 0 s macFas5.chr2 192416951 19 - 192460366 ggtgg--cactgcctggcatc i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2703476 1541 - 6579706 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e saiBol1.JH378146 17288214 1973 - 17725628 I e calJac3.chr17 73842485 2048 + 74750902 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e colAng1.NW_012118932v1 7368242 843 - 7796314 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e chlSab2.chr15 91362369 850 + 91754291 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e rheMac8.chr2 2350878 923 - 204787373 I e panPan2.chrUn_NW_014024201v1 128994 0 - 190779 C a score=2548.000000 s hg38.chr3_KI270934v1_alt 66930 1 + 163458 a s panTro5.chr3 2538958 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128994 1 - 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80008 1 - 106623 a i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2855970 1 - 123690457 a i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192416970 1 - 192460366 a i macFas5.chr2 C 0 C 0 s calJac3.chr17 73844533 1 + 74750902 A i calJac3.chr17 I 2048 C 0 s dasNov3.JH569502 2705017 1 - 6579706 a i dasNov3.JH569502 I 1541 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e saiBol1.JH378146 17288214 1973 - 17725628 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2323665 1536 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e colAng1.NW_012118932v1 7368242 843 - 7796314 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e chlSab2.chr15 91362369 850 + 91754291 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e rheMac8.chr2 2350878 923 - 204787373 I a score=1800.000000 s hg38.chr3_KI270934v1_alt 66931 1 + 163458 g s panTro5.chr3 2538959 1 - 202621043 g i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128995 1 - 190779 g i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80009 1 - 106623 g i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2855971 1 - 123690457 g i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192416971 1 - 192460366 c i macFas5.chr2 C 0 I 5 s calJac3.chr17 73844534 1 + 74750902 G i calJac3.chr17 C 0 C 0 s canFam3.chr33 2325201 1 - 31377067 G i canFam3.chr33 I 1536 C 0 s dasNov3.JH569502 2705018 1 - 6579706 g i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e saiBol1.JH378146 17288214 1973 - 17725628 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e otoGar3.GL873829 209233 679 + 608964 I e colAng1.NW_012118932v1 7368242 843 - 7796314 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e chlSab2.chr15 91362369 850 + 91754291 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e rheMac8.chr2 2350878 923 - 204787373 I a score=20965.000000 s hg38.chr3_KI270934v1_alt 66932 7 + 163458 ataacat s panTro5.chr3 2538960 7 - 202621043 ataacat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128996 7 - 190779 ataacat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80010 7 - 106623 ataacat i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2855972 7 - 123690457 gtaaCAT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192416977 7 - 192460366 CTGGCAT i macFas5.chr2 I 5 C 0 s colAng1.NW_012118932v1 7369085 7 - 7796314 ataacat i colAng1.NW_012118932v1 I 843 C 0 s calJac3.chr17 73844535 7 + 74750902 AGAGCAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290187 7 - 17725628 acagcat i saiBol1.JH378146 I 1973 C 0 s canFam3.chr33 2325202 7 - 31377067 GTAACCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2705019 7 - 6579706 ataacat i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e aotNan1.NW_018503669v1 15821 2097 + 69927 I e micMur3.chr1 88390706 1703 + 114275543 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e otoGar3.GL873829 209233 679 + 608964 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e chlSab2.chr15 91362369 850 + 91754291 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e rheMac8.chr2 2350878 923 - 204787373 I a score=52928.000000 s hg38.chr3_KI270934v1_alt 66939 15 + 163458 atgcaaagctggtgg s panTro5.chr3 2538967 15 - 202621043 atgcaaagctggtgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129003 15 - 190779 atgtaaagctggtgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80017 15 - 106623 atgcaaagctggtgg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2855979 15 - 123690457 ATGCAAAGCTGGTGG i nomLeu3.chr11 C 0 C 0 s colAng1.NW_012118932v1 7369092 15 - 7796314 acacgaagctggtgg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73844542 15 + 74750902 ATGCAGAGCTGGCGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290194 15 - 17725628 atgcagagctggcgg i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 17918 15 + 69927 atgcagagctggtgg i aotNan1.NW_018503669v1 I 2097 C 0 s canFam3.chr33 2325209 15 - 31377067 CTGCGAAGCTCGCAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2705026 15 - 6579706 atggaaaactcatgg i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e micMur3.chr1 88390706 1703 + 114275543 I e macNem1.NW_012014355v1 19155593 953 - 19675229 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e otoGar3.GL873829 209233 679 + 608964 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I e chlSab2.chr15 91362369 850 + 91754291 I e cerAty1.NW_012004056v1 16393392 972 - 16847902 I e macFas5.chr2 192416984 0 - 192460366 C e rheMac8.chr2 2350878 923 - 204787373 I a score=280618.000000 s hg38.chr3_KI270934v1_alt 66954 41 + 163458 cacactgcctggcacCGGAGAGAACGTTCTGCTGGGGCCAG s panTro5.chr3 2538982 41 - 202621043 cacactgcctggcacCGGAGAGAACGTTCCGCTGGGGCCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129018 41 - 190779 cacactgcctggcaccagagagaacgttcCGCTGGGGCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80032 41 - 106623 cacactgcctggcacCGGAGAGAACGTTCTGCTGGGGTCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2855994 41 - 123690457 CACACTGCCTGGCATCAGAGAGAATGTTCAGCTGGGGCCAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2351801 41 - 204787373 CACACTGCCTGGCATCAGAGAGAACGTTCAGCGGGGGCCAA i rheMac8.chr2 I 923 C 0 s macFas5.chr2 192416984 41 - 192460366 CACACTGCCTGGCATCAGAGAGAACGTTCAGCGGGGGCCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19156546 41 - 19675229 CACACTGCCTGGCATCAGAGAGAACGTTCAGCGGGGGCCAA i macNem1.NW_012014355v1 I 953 C 0 s cerAty1.NW_012004056v1 16394364 41 - 16847902 CACACTGCCTGGCATCAGAGAGAACGTCCAGCGGGGGCCAA i cerAty1.NW_012004056v1 I 972 C 0 s chlSab2.chr15 91363219 41 + 91754291 cacaCTGCCTGGCATCAGAGAGAACGTTCAGCGGGGGCCAA i chlSab2.chr15 I 850 C 0 s colAng1.NW_012118932v1 7369107 39 - 7796314 --caccgcctggcatcagagagaacgttcaGCGGGGGCCAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73844557 29 + 74750902 CAT---------CAG---AGAGAACCTTCAGCTGGTGCCAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290209 39 - 17725628 catgctgcctggcatc--agagaacattcaGCTGGTGCCAA i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 17933 39 + 69927 cacactgcctgccatcagagagaacattcGG--GGTGCCAA i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 2325224 35 - 31377067 GTTACTGCCTGACGTCAGCAAGCACGCACAGCCGG------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2705041 41 - 6579706 tgcactgctgggcatcacacagaacattcaGCTAGTGCCCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32790237 1400 + 98207768 I e micMur3.chr1 88390706 1703 + 114275543 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e otoGar3.GL873829 209233 679 + 608964 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I a score=1125.000000 s hg38.chr3_KI270934v1_alt 66995 1 + 163458 T s panTro5.chr3 2539023 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129059 1 - 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80073 1 - 106623 T i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2856035 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2351842 1 - 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417025 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19156587 1 - 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16394405 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91363260 1 + 91754291 C i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7369146 1 - 7796314 T i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73844586 1 + 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290248 1 - 17725628 G i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 17972 1 + 69927 C i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32791637 1 + 98207768 T i mm10.chr16 I 1400 C 0 s dasNov3.JH569502 2705082 1 - 6579706 T i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e micMur3.chr1 88390706 1703 + 114275543 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e canFam3.chr33 2325259 0 - 31377067 C e otoGar3.GL873829 209233 679 + 608964 I e manLeu1.NW_012102020v1 1431489 1199 + 1977891 I a score=269721.000000 s hg38.chr3_KI270934v1_alt 66996 31 + 163458 GCTTACTGGGTGTGAAACATGTTTATATCA-C s panTro5.chr3 2539024 31 - 202621043 GCTTACTGGGTGTGAAACATGTTTATATCA-C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129060 31 - 190779 GCTTACTGGGTGTGAAACATGTTTATATCA-C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80074 30 - 106623 GCTTACTGGGTGTGAAACATGTTTATATCA-- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2856036 31 - 123690457 GCTTACTGGCTGTGAAATGTGTTTATATCA-C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2351843 31 - 204787373 GCTTACTGGGTGTGAAACATGTTTATATCA-C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417026 31 - 192460366 GCTTACTGGGTGTGAAACATGTTTATATCA-C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19156588 31 - 19675229 GCTTACTGGGTGTGAAACATGTTTATATCA-C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16394406 31 - 16847902 GCTTACTGGGTGTGAAACATGTTTATATCA-C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91363261 31 + 91754291 GCTTACTGGATGTGAAACATGTTTATATCA-C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1432688 31 + 1977891 GCTTACTGGGTGTGAAACATGTTTATATCA-C i manLeu1.NW_012102020v1 I 1199 C 0 s colAng1.NW_012118932v1 7369147 31 - 7796314 GCTTCCTGGGTGTGAAACATGTTTATATCA-C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73844587 29 + 74750902 GCTCA-TGGGTGTGAAACGTTTTTATGTCA-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290249 30 - 17725628 GCTCACTGGGTGTGAGACATTTTTATGTCA-- i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 17973 31 + 69927 GCTCACTGGGTGTGAAACATTTTTATGTCAC- i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32791638 31 + 98207768 GCCTACTGACTGCAAAGTGTTTTTATATTA-A i mm10.chr16 C 0 C 0 s canFam3.chr33 2325259 21 - 31377067 ---TCCTGAGGG-------TTTCTCTCTCA-C i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2705083 31 - 6579706 GTTTCCTGCTTGTGAAATAGTTTTAGATCA-T i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e micMur3.chr1 88390706 1703 + 114275543 I e cebCap1.NW_016107444v1 6378268 2214 + 6778120 I e otoGar3.GL873829 209233 679 + 608964 I a score=356693.000000 s hg38.chr3_KI270934v1_alt 67027 34 + 163458 CCCTGCCTATAACATGAAAGATATTCAATAATAT s panTro5.chr3 2539055 34 - 202621043 CCCTGCCTATAATACGAAAGATATTCAATAATAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129091 34 - 190779 CCCTGCCTATAATACGAAAGATATTCAATAATAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80104 34 - 106623 CCCTGCCTATAATACGAAAGATATTCAATAATAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2856067 34 - 123690457 CCCTACCTACAATACAAAAGATATTCAATAATAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2351874 34 - 204787373 CCCTTTCTACAATACAAAAGATATTCAATAATAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417057 34 - 192460366 CCCTTTCTACAATACAAAAGATATTCAATAATAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19156619 34 - 19675229 CCCTTTCTACAATACAAAAGATATTCAATAATAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16394437 34 - 16847902 CCCTTTCTACAATACAAAAGGTATTCAATAATAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91363292 34 + 91754291 CCCTGCCTACAATACAAAAGGTATTCAATAATAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1432719 34 + 1977891 CCCTTTCTACAATACAAAAGATATTCAATAATAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7369178 34 - 7796314 CCCTGCCTACAATACAAAAGGTATTCAATAATAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73844616 34 + 74750902 CCCTGCCTACAACACAAAAGATACTCAACAATAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290279 34 - 17725628 CCCTGCCTACAGCACTATAGACACTCAACAATAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6380482 34 + 6778120 CCCTGCCTACAACACAAAAGACACTCAACAATAT i cebCap1.NW_016107444v1 I 2214 C 0 s aotNan1.NW_018503669v1 18004 33 + 69927 -CCTGCCAACAACACAAAAGATACTCAACAATGT i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32791669 34 + 98207768 TCTTACCTAGAATAAAAAAGATATACAATAACAT i mm10.chr16 C 0 I 545 s canFam3.chr33 2325280 31 - 31377067 TTCTCCCTGGCACATGAGTGATGTTCGGTAA--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2705114 31 - 6579706 CCCTGCCTGAAACACAGAAGAAAATCAGTAA--- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e micMur3.chr1 88390706 1703 + 114275543 I e otoGar3.GL873829 209233 679 + 608964 I a score=144538.000000 s hg38.chr3_KI270934v1_alt 67061 17 + 163458 CTTTATGTATTGAGTGG s panTro5.chr3 2539089 17 - 202621043 CTTTATGTATTGAGTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129125 17 - 190779 CTTTATGTATTGAGTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80138 17 - 106623 CTTTATGTATTGAGCGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2856101 17 - 123690457 CTTTCTGTACTGAGTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2351908 17 - 204787373 CCTTATTTATTGAGTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417091 17 - 192460366 CCTTATTTATTGAGTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19156653 17 - 19675229 CCTTATTTATTGAGTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16394471 17 - 16847902 CCTTATTTATTGAGTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91363326 17 + 91754291 CTTTATTTATTGAGTGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1432753 17 + 1977891 CCTTATTTATTGAGTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7369212 17 - 7796314 CTTTATTTATTGAGTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73844650 17 + 74750902 CTTTATTTATTGAGTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290313 17 - 17725628 CTTTATTTATTGGGTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6380516 17 + 6778120 CTTTATTTATTGGGCGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18037 17 + 69927 CTTTCTTTATTGAGTGG i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 2325311 5 - 31377067 ------------GGCGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2705145 5 - 6579706 -----------GGCTG- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32791703 545 + 98207768 I e micMur3.chr1 88390706 1703 + 114275543 I e otoGar3.GL873829 209233 679 + 608964 I a score=2190816.000000 s hg38.chr3_KI270934v1_alt 67078 206 + 163458 TTGTGATTAATATTTGTATTCCCACCTCCCCCAGAAAGGTGGTAACAAGCTGCGGATA----CACAGAGATGAGGCCCAAGGGCAGAGTGACAGGAAGTGGAGGTGGAGGCTACAGGCTGACCAGAA--------GCTGGACTGACCAAGCAGCCTCTGACAATGAACTTCTCCCCTGAGAAGTCCC----TGTTGCCTCAGAGATGTAGCTTTAAACTCCC s panTro5.chr3 2539106 206 - 202621043 TTGTGATTAATATTTGTATTCCCACCTCCCCCAGAAAGGTGGTAACAAGCCGCGGATA----CACAGAGATGAGGCCCAAGGGCAGAGTGACAGGAAGTGGAGGTGGAGGCTACAGGCTGACCAGAA--------GCTGGACTGACCAAGCAGCCTCTGACAATGAACTTCTCCCCTGAGAAGTCCC----TGTTGCCTCAGAGATGTAGCTTTAAACTCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129142 206 - 190779 TTGTGATTAATATTTGTATTCCCACCTCCCCCAGAAAGGTGGTAACAAGCCGCGGATA----CACAGAGATGAGGCCCAAGGGCAGAGTGACAGGAAGTGGAGGTGGAGGCTACAGGCTGACCAGAA--------GCTGGACTGACCAAGCAGCCTCTGACAATGAACTTCTCCCCTGAGAAGTCCC----TGTTGCCTCAGAGATGTAGCTTTAAACTCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80155 206 - 106623 TTGTGATTAATATTTGTATTCCCACCTCCCCCAGAAAGGTGATAACAAGCTGCGGATA----CGCAGAGATGAGGCCCAAGGGCAGAGTGACAGGAAGTGGAGGTGGAGGCTACAGGCTGACCAGAA--------GCTGGACTGACCAAGCAGCCTCCGACAATGAACTTCTCCCCTGAGAAGTCCC----TGTTGCCTCAGAGATGTAGCTTTAAACTCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2856118 206 - 123690457 TTGTGATTAATATTTGTATTCCCACCTCCCCCAGAAAGGTGGGAGCAAGCTGCGGATA----CACAGAGATGAGGCCCAAGTGCAGAGTGACAGGAAGTGGAGGTGGAGGCTACAGGCTGACCAGAA--------GCTGGACTGACCAAGCAGCCTCTGACAATGAACTTCTCCCCTTTGAAGTCCC----TGTTGCCTCAAAGATGTAGCTTTAAACTCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2351925 209 - 204787373 CTGTGATTAATGTTTGTATTCCCACCTCCCCCAGAAAGGTGGGAGCAAGCTGTGGATA----CACAGAGATGAGGCCCAAGGGCAGAGTGACAGCAAGTGGAGGTGGAGGCTACAGGCTGGCCAGAA--------GCTGGACTGACCAAGCAGCCTCTGACAATGAAC-TCTCCCCTGAGAAGTCCCTGTTTGTTGCCTCAGAGATGTAGCTTTAAACTCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417108 209 - 192460366 CTGTGATTAATGTTTGTATTCCCACCTCCCCCAGAAAGGTGGGAGCAAGCTGTGAATA----CACAGAGATGAGGCCCAAGGGCAGAGTGACAGCAAGTGGAGGTGGAGGCTACAGGCTGGCCAGAA--------GCTGGACTGACCAAGCAGCCTCTGACAATGAAC-TCTCCCCTGAGAAGTCCCTGTTTGTTGCCTCAGAGATGTAGCTTTAAACTCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19156670 209 - 19675229 CTGTGATTAATGTTTGTGCTCCCACCTCCCCCAGAAAGGTGGGAGCAAGCTGTGGATA----CACAGAGATGAGGCCCAAGGGCAGAGTGACAGCAAGTGGAGGTGGAGGCTACAGGCTGGCCGGAA--------GCTGGACTGACCAAGCAGCCTCTGACAATGAAC-TCTCCCCTGAGAAGTCCCTGTTTGTTGCCTCAGAGATGTAGCTTTAAACTCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16394488 209 - 16847902 CTGTGATTAATGTTTGTATTCCCACCTCCCCCAGAAAGGTGGGAGCAAGCTGTGGATA----CACAGAGATGAGGCCCAAGGGCAGAGGGACAGCAAGTGGAGGTGGAGGCTACAGGCTGGCCAGAA--------GCTGGACTGACCAAGCAGCCTCTGACAATGAAC-TGTCCCCTGAGAAGTCCCTGTTTGTTGCCTCAGAGATGTAGCTTTAAACTCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91363343 209 + 91754291 CTGTGATTAATGTTTGTATTCCCACCTCCCCCAGAAAGGTGGGAGCAAGCTGTGGACA----CACAGAGATGAGGCCCAAGGGGAGAGCGACAGGAAGTGGAGGTGGAGGCTACAGGCTGGCCAGAA--------GCTGGACTGACCAAGCAGCCTCTGACATTGGAC-TCTCCCCTGAGAAGTCCCTGTTTGTTGCCTCAGGGATGTAGCTTTAAACTCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1432770 209 + 1977891 CTGTGATTAATGTTTGTATTCCCACCTCCCCCAGAAAGGTGGGAGCAAGCTGTGGATA----CACAGAGATGAGGCCCAAGGGCAGAGTGACAGCAAGTGGAGGTGGAGGCTACAGGCTGGCCAGAA--------GCTGGACTGGCCAAGCAGCCTCTGACAATGAAC-TCTCCCCTGAGAAGTCCCTGTTTGTTGCCTCAGAGATGTAGCTTTAAACTCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7369229 207 - 7796314 CTGTGATTAATGTTTGCATCCTCACCTCCCCCAGAAAGGTGGGAGCAAGCTGTGGATA----CACAGAGATGAGGCCCAAGGGCAGA-TGACAGGAAG-GGAGGTGGAGGCTACAGGCTGGCCAGAA--------GCTGGACTGACCAAGCAGCCTCTGACAATGAAC-TCTCCCCTGAGAAGTCCCTGTTTGTTGCCTTAGAGATGTCGCTTTAAACTCCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73844667 199 + 74750902 TTGTGATTAACATTTGTATTCCCACCTCCTCCAGAAAAGTGGGAACAAGCTGTGG--A----CACAGAGATGAGGCCCAAGGACAGAGTGACGGGAGGTGCAGGTGGAGGCT----GCAGGCCGGAA--------GCTGGACTGACCAGGCAGCCTCTGGCAACGAGT-CCTCCCCTGAGGAGTCCC----CGTTGCCTGAGAGATAGAGCTTTCAACTCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290330 190 - 17725628 TTGTCATTAATATTTGTATTCCCACCTCCTCCAGAAAGGTGGGAGC-AGCTGTGGGTA----CACAGAGGTGAGGCCCAAGGACAGAGTGACAGGAGGGGGAGG------------GCTGGCCGGAG--------GCTGGGCTGACCAGGCAGCCTCTGGC-ACGAGT-TCT-CACTGAGGAGTCCC----CGTTGCCTCAGAGATACAGCTTTCAACTCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6380533 192 + 6778120 TTGTGATTAATATCTGTATTCCCACCTCTTCCAGAAAGGTGGGAGCAAGCTGTGGATA----CACAGAGGCGAGGCCC-AGGACAGAGTGACAGGAGGTGGCGG-------T----GGAGGCCGGAA--------GCTGGGCTGACCAGGCAGCCTCTGGC-ACGAGT-TCTCCCCTGAGGAGTCCC----CGTTGCCTCAGAGATACAGCTTTCAACTCCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18054 199 + 69927 TTGTGATTAATATTTGTATTCCCACCTCCTCCAGAAAGGTGGGAGCAAGCTGTGGATA----CGCAGAGATGAGGCCCAAGGAC--AGTGACAGGAGGCGGAGGTGGAGGCT----GCAGACCGGAA--------GCTGCACTGACCAGGCAGCCTCTGGCAACGAGC-TCTCCCCTGAGGAGTCCC----CGTTGCCTCAGAGATAGAGCTTTCAACTCCC i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32792248 196 + 98207768 tcATGATTAACATTTTTATTCC--CCTTGCCCAAAAAAGTAG-AACAAGGCAAAGATA----CTCAGGAATGCACCATAAGGAGAAGATGA---GCAGTAGAGGCAGACACTCCA-GCTGCCCACAA--------GCTGCCCTTACGGGAGAGTTGCTGACAATGCGC---CTCTCTGAGACGCTTC----TGTTGTTTCAGAAATGAAGGTTTAAACTCCC i mm10.chr16 I 545 I 12 s canFam3.chr33 2325316 202 - 31377067 CTGTCGTGGATATTTTTATTTC-ACGTCTCC---ACAGACCAGGGCCAGCTGAGGATAATACCACAGGGACGAGGCCCAAGGACAGTGTCA---GAAGTGGAGGTGGAGGTTCCAGGCTGGCCAGAA--------GCTGGGCTGAC-ACGCAGCCTCTGACAAGGGGCTTCTTCCCTGAGAAGTACC----TGTTGTCTCAGACACGTAGCTTTAAACCCCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2705150 192 - 6579706 GGGTGATTAACATCATTATTTC-ATCTCCTC-AGAAAGGAAGG-GCAGGATGAGGAAA---CCACAGGGATGAGGCATAAGGAAAGAGTGA-AGGAAATGGAGGAGGAGGCTACTGGGGTGCAAGAGGTTGTGATGCTGGGTTGCCCAAGAAGGTTCTGATAAGTATC-----------------------TGTTGACTCAAAGATATAACTTTAACCTCCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e micMur3.chr1 88390706 1703 + 114275543 I e otoGar3.GL873829 209233 679 + 608964 I a score=94964.000000 s hg38.chr3_KI270934v1_alt 67284 16 + 163458 AAGCCTTCGCTGTAt----t s panTro5.chr3 2539312 16 - 202621043 AAGCCTTTGCCGTAt----t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129348 16 - 190779 AAGCCTTTGCCGTAt----t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80361 15 - 106623 AAGCCTTCGCCGTAt----- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2856324 20 - 123690457 AAGACTTTGCCGTATTTAtt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352134 16 - 204787373 AAGACTTTGCTGTAt----t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417317 16 - 192460366 AAGACTTTGCTGTAt----t i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19156879 16 - 19675229 AAGACTTTGCTGTAt----t i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16394697 16 - 16847902 AAGCCTTTGCTGTAt----t i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91363552 16 + 91754291 AACCCTTTGCTGTAt----t i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1432979 16 + 1977891 AAGCCTTTGCTGTAt----t i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7369436 16 - 7796314 AAGACTTTGCTGTAt----t i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73844866 16 + 74750902 ATACCTTCACCACGt----t i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290520 16 - 17725628 ATGACTTAACCGTAt----t i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6380725 16 + 6778120 ACACCGTCACTGTAT----T i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18253 16 + 69927 ACACCTTCACCGTAT----T i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 2325518 16 - 31377067 AATCCTTCACCCCAT----T i canFam3.chr33 C 0 I 100 s dasNov3.JH569502 2705342 8 - 6579706 GAACATTC------------ i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32792444 12 + 98207768 I e micMur3.chr1 88390706 1703 + 114275543 I e otoGar3.GL873829 209233 679 + 608964 I a score=7847.000000 s hg38.chr3_KI270934v1_alt 67300 1 + 163458 t s panTro5.chr3 2539328 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129364 1 - 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2856344 1 - 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352150 1 - 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417333 1 - 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19156895 1 - 19675229 t i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16394713 1 - 16847902 t i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91363568 1 + 91754291 t i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1432995 1 + 1977891 t i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7369452 1 - 7796314 t i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73844882 1 + 74750902 t i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290536 1 - 17725628 t i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6380741 1 + 6778120 C i cebCap1.NW_016107444v1 C 0 I 71 s aotNan1.NW_018503669v1 18269 1 + 69927 T i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32792444 12 + 98207768 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2705350 0 - 6579706 C e canFam3.chr33 2325534 100 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e gorGor5.CYUI01000576v1 80376 0 - 106623 C a score=60371.000000 s hg38.chr3_KI270934v1_alt 67301 8 + 163458 gcttattt s panTro5.chr3 2539329 8 - 202621043 gtttattt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129365 8 - 190779 gtttattt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80376 6 - 106623 --ttattt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2856345 8 - 123690457 gtttattt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352151 8 - 204787373 atttgttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417334 8 - 192460366 atttgttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19156896 8 - 19675229 atttgttt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16394714 8 - 16847902 atttgttt i cerAty1.NW_012004056v1 C 0 I 66 s chlSab2.chr15 91363569 8 + 91754291 atttgttt i chlSab2.chr15 C 0 I 67 s manLeu1.NW_012102020v1 1432996 8 + 1977891 gtttgttt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7369453 8 - 7796314 atttgttt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73844883 8 + 74750902 atttgttt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290537 8 - 17725628 atttgttt i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 18270 8 + 69927 Atttgttt i aotNan1.NW_018503669v1 C 0 I 5 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32792444 12 + 98207768 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2705350 0 - 6579706 C e cebCap1.NW_016107444v1 6380742 71 + 6778120 I e canFam3.chr33 2325534 100 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I a score=-3373.000000 s hg38.chr3_KI270934v1_alt 67309 19 + 163458 -----tatcttaccttttttt----ttt s panTro5.chr3 2539337 18 - 202621043 -----tatcttacc-tttttt----ttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129373 18 - 190779 -----tatcttacc-tttttt----ttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80382 19 - 106623 -----tatcttaccttttttt----ttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2856353 18 - 123690457 -----tatcttact-tttttt----ttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352159 14 - 204787373 -------gtttg---tttgtt----ttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417342 14 - 192460366 -------gtttg---tttgtt----ttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19156904 14 - 19675229 -------gtttg---tctgtt----ttt i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 1433004 14 + 1977891 -------gtttg---tttatt----ttt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7369461 14 - 7796314 -------gtttg---tttatt----ttt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73844891 18 + 74750902 -------tatta---ttatgattatttt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290545 14 - 17725628 -------tatta---ttatta----ttt i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 18283 17 + 69927 -------tatta---ttatta-tttttt i aotNan1.NW_018503669v1 I 5 C 0 s dasNov3.JH569502 2705350 18 - 6579706 ATCCAATGTTTG---TTTGTT------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32792444 12 + 98207768 I e micMur3.chr1 88390706 1703 + 114275543 I e cebCap1.NW_016107444v1 6380742 71 + 6778120 I e canFam3.chr33 2325534 100 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e chlSab2.chr15 91363577 67 + 91754291 I e cerAty1.NW_012004056v1 16394722 66 - 16847902 I a score=116073.000000 s hg38.chr3_KI270934v1_alt 67328 19 + 163458 gagacggagtttcactccg s panTro5.chr3 2539355 19 - 202621043 gagacggagtttcactccg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129391 19 - 190779 gagacggagtttcactccg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80401 19 - 106623 gagacggagtttcactccg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2856371 19 - 123690457 gagatggagtttcactctg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352173 19 - 204787373 gagatggagtttcactctc i rheMac8.chr2 C 0 I 29 s macFas5.chr2 192417356 19 - 192460366 gagatggagtttcactctc i macFas5.chr2 C 0 I 29 s macNem1.NW_012014355v1 19156918 19 - 19675229 gagatggagtttcactctc i macNem1.NW_012014355v1 C 0 I 29 s manLeu1.NW_012102020v1 1433018 19 + 1977891 gagatggagtttcactctc i manLeu1.NW_012102020v1 C 0 I 26 s colAng1.NW_012118932v1 7369475 19 - 7796314 gagatggagtttcactctc i colAng1.NW_012118932v1 C 0 I 29 s calJac3.chr17 73844909 19 + 74750902 gatatggaatttcactctt i calJac3.chr17 C 0 I 29 s saiBol1.JH378146 17290559 19 - 17725628 gagatggagtttcactctt i saiBol1.JH378146 C 0 I 29 s aotNan1.NW_018503669v1 18300 19 + 69927 gagatggagtctcactctt i aotNan1.NW_018503669v1 C 0 I 29 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32792444 12 + 98207768 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2705368 0 - 6579706 C e cebCap1.NW_016107444v1 6380742 71 + 6778120 I e canFam3.chr33 2325534 100 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e chlSab2.chr15 91363577 67 + 91754291 I e cerAty1.NW_012004056v1 16394722 66 - 16847902 I a score=9555.000000 s hg38.chr3_KI270934v1_alt 67347 1 + 163458 t s panTro5.chr3 2539374 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129410 1 - 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80420 1 - 106623 t i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2856390 1 - 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352221 1 - 204787373 t i rheMac8.chr2 I 29 C 0 s macFas5.chr2 192417404 1 - 192460366 t i macFas5.chr2 I 29 C 0 s macNem1.NW_012014355v1 19156966 1 - 19675229 t i macNem1.NW_012014355v1 I 29 C 0 s cerAty1.NW_012004056v1 16394788 1 - 16847902 t i cerAty1.NW_012004056v1 I 66 C 0 s manLeu1.NW_012102020v1 1433063 1 + 1977891 t i manLeu1.NW_012102020v1 I 26 I 3 s colAng1.NW_012118932v1 7369523 1 - 7796314 t i colAng1.NW_012118932v1 I 29 C 0 s calJac3.chr17 73844957 1 + 74750902 t i calJac3.chr17 I 29 C 0 s saiBol1.JH378146 17290607 1 - 17725628 t i saiBol1.JH378146 I 29 C 0 s cebCap1.NW_016107444v1 6380813 1 + 6778120 t i cebCap1.NW_016107444v1 I 71 C 0 s aotNan1.NW_018503669v1 18348 1 + 69927 t i aotNan1.NW_018503669v1 I 29 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32792444 12 + 98207768 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2705368 0 - 6579706 C e canFam3.chr33 2325534 100 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e chlSab2.chr15 91363577 67 + 91754291 I a score=474071.000000 s hg38.chr3_KI270934v1_alt 67348 47 + 163458 ctcagctcactgtaacctccacctcccgggttcaagtgattctcctg s panTro5.chr3 2539375 47 - 202621043 ctcagctcactgcaacctccacctcccgggttcaagtgattctcctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129411 47 - 190779 ctcagctcactgcaacctccacctcccgggttcaagtgattctcctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80421 47 - 106623 ctcagctcactgcaacctccacctcctgggttcaagtgattctcctg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2856391 46 - 123690457 ctcagctcactgcaacctccacctcccgggttc-agtgattctcctg i nomLeu3.chr11 C 0 I 87802 s rheMac8.chr2 2352222 47 - 204787373 ctcggctcacttcaacctccacctcccgggttcaagcgattctcctg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417405 47 - 192460366 ctcggctcacttcaacctccacctcccgggttcaagcgattctcctg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19156967 47 - 19675229 ctcggctcacttcaacctccacctcccgggttcaagcgattctcctg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16394789 47 - 16847902 ctcggctcacttcaacctccacctcctgggttcaagtgattctcctg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91363644 47 + 91754291 ctcggctcacttcaacctccacctcccgggttcaagtgattctcctg i chlSab2.chr15 I 67 C 0 s manLeu1.NW_012102020v1 1433067 47 + 1977891 ctcggctcacttcaacctccacctcccgggttcaagctattctcctg i manLeu1.NW_012102020v1 I 3 C 0 s colAng1.NW_012118932v1 7369524 47 - 7796314 ctcggctcacttcaacctccacctcctgggttcaagcaattctcctg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73844958 47 + 74750902 ctcagctcactgtaacctccacctcctgggttcaagcagttcgcctg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290608 47 - 17725628 ctcagctcactgcaacctccacctcctggattcaagcgattcccctg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6380814 47 + 6778120 ctcagctcactgcaacctccacctcctgggttcaagcgattcccctg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18349 47 + 69927 ctcagctcaccgcaacctccacctcctgggttcaagcaattctcctg i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32792444 12 + 98207768 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2705368 0 - 6579706 C e canFam3.chr33 2325534 100 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I a score=1386172.000000 s hg38.chr3_KI270934v1_alt 67395 189 + 163458 cctcagtctcccaagtagctgggattacaggcgcccaccactgcgcccagctaattttcatattttt-agtagagat-ggggtttcaccatgttggtcagcctggtctcgaactcctgacctcaggtgatccgccggcctctgcctcccaaagtgctgggattacaggcataagccaccgctccagg------ccTG s panTro5.chr3 2539422 189 - 202621043 cctcagtctcccaagtagctgggattacaggcacccaccactgcgcccagctaattttcatattttt-agtagagat-ggggtttcaccatgttggtcagcctggtctcgaactcctgacctcaggtgatctgcccgcctctgcctcccaaagtgctgggattacaggcataagccaccgctcccgg------ccTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129458 189 - 190779 cctcagtctcccacgtagctgggattacaggcacccaccactgcgcccagctaattttcatattttt-ggtagagat-ggggtttcaccatgttggtcagcctggtctcgaactcctgacctcaggtgatctgcccacctctgcctcccaaagtgctgggattacaggcataagccaccgctcccgg------ccTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80468 190 - 106623 cctcagtctcccaagtagctgggattacaggcgcccaccactgcgcccagctaattttcatattttt-agtagagatgggggtttcaccatgttggtcagcctggtctcgaactcctgacctcaggtgatccgcccgcctctgcctcccaaagtgctgggattacaggcataagccaccgctcccag------ccTG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2352269 195 - 204787373 cctcagcctcccgagtagctggtattacaggcgtgcgccaccacgcctggttcattttcaaattttt-agtagagac-ggggtttcactatgttggccaggctggtcttaaactcctaacctcaggtgatttaccctcctcggcctcccaaagtgctggcgttacaggcgtgagccaccgctcccagccTGTACCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417452 195 - 192460366 cctcagcctcccgagtagctggtattacaggcgtgcgccaccacgcccggttcattttcaaattttt-agtagagac-ggggtttcactatgttggccaggctggtcttaaactcctaacctcaggtgatttaccctcctcggcctcccaaagtgctggcgttacaggcgtgagccaccgctcccggccTGTACCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157014 195 - 19675229 cctcagcctcccgagtagctggtattacaggcgtgcgccaccacgcccggttcattttcaaattttt-agtagagac-ggggtttcactatgttggccaggctggtcttaaactcctaacctcaggtgatttaccctcctcggcctcccaaagtgctggcgttacaggcgtaagccaccgctcccggccTGTACCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16394836 189 - 16847902 cctcagcctcccaagtagctggtattacaggcgtgcgccaccacacccggttcattttcaaattttt-agtagagac-ggggtttcactgtgttggccaggctggtcttaaactcctaacctcaggtgatttaccctcctcggcctcccaaagtgctggcgttacaggcgtgagccaccactcccgg------ccTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91363691 189 + 91754291 cctcagcctcctgagtagctggtattacaggcgtgcaccaccacgccccgttcattttcaaattttt-agtagagac-ggggtttcactatgttggccaggctggtcttaaactcctaacctcaggtgatttaccctcctccacctcccaaagtgctggcgttacaggcgtgagccaccgctcccgg------ccTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433114 189 + 1977891 cctcagtctcccgagtagctggtattacaggcgtgcgccaccacgcccggttcattttcaaattttt-agtagagac-ggggtttcactatgttggccaggccggtcttaaactcctaacctcaagtgatttaccctcctcggcctcccaaagtgctggcgttacaggtgtgagccaccgctcccgg------ccTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7369571 189 - 7796314 cctcagcctcctgagtagctgggattacaggcatgcgccaccacacccagttcattttcaaattttt-agtagagac-gggatttcactatgttggccaggctggtcttacactcctaacctcaggtgatttaccctcctcggcctcccaaagtcctggcgttacaggcgtgagccaccactcccgg------ccTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845005 188 + 74750902 cctcagcctcctgagtagctggaattacaggcatgtgctactatacctggctaatttttgtattttt-aatatagac-ggggtttcaccatgttgaccaggctggtctcgaactcctaaccttaggtggt-cacccccctcggcctcccaaagtgctgagattacaggcatgagccgccgcacccag------ccCG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290655 187 - 17725628 cctcagcctcctaagtagctggaattacaggcatgcac-gctacacccggctaattttcgtattttt-aatacagac-agtgtttcgccatgttggccaagctggtctcaaactcctgacctcaggtggtccatcctcctcggcctcccaaagtgctgagatcacaggcatgagccaccgcgcccag-------ccG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6380861 157 + 6778120 cctcagcctcctgagtagctggaattacaggcatgcgctactacacccagctaatttttgtattttcaaatatagac-agggtttcaccatgttgaccaggctggtctcgaactactaacctcaggtgat--------------------------------TACAGGCATGAGCCACCGCACCCAG-------CTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18396 177 + 69927 cctcagcgtcccgagtagctggaattacaggcatgcgcttctacacccggctaaattttgtattttt-aatatagac-ggggtttcaccatgttgaccaggcaggtctcgaactcctaacctcaggtggtccaccctcctcggcctcccaaagtgctgagattacag------------gcgCCCAG------CCCG i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e mm10.chr16 32792444 12 + 98207768 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2705368 0 - 6579706 C e canFam3.chr33 2325534 100 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e nomLeu3.chr11 2856437 87802 - 123690457 I a score=73015.000000 s hg38.chr3_KI270934v1_alt 67584 10 + 163458 TATTAATTTA s panTro5.chr3 2539611 10 - 202621043 TATTAATTTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129647 10 - 190779 TATTAATTTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80658 10 - 106623 TATTAATTTA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2352464 10 - 204787373 TATTCATTTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417647 10 - 192460366 TATTCATTTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157209 10 - 19675229 TATTCATTTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395025 10 - 16847902 TGTTCATTTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91363880 10 + 91754291 TATTCATTTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433303 10 + 1977891 TGTTCATTTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7369760 10 - 7796314 TATTCATTTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845193 10 + 74750902 TATGTATTTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290842 8 - 17725628 TATTTATT-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381018 10 + 6778120 TATTTATTTA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18573 10 + 69927 TATTTATTTA i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32792456 10 + 98207768 TGTTGGTTTG i mm10.chr16 I 12 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e micMur3.chr1 88390706 1703 + 114275543 I e dasNov3.JH569502 2705368 0 - 6579706 C e canFam3.chr33 2325534 100 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e nomLeu3.chr11 2856437 87802 - 123690457 I a score=264536.000000 s hg38.chr3_KI270934v1_alt 67594 24 + 163458 TTTTAAGTCACTATCTATGGCATA s panTro5.chr3 2539621 24 - 202621043 TTTTAAGTCACTATCTATGGCGTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129657 24 - 190779 TTTTAAGTCACTATCTATGGCGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80668 24 - 106623 TTTTAAGTCACTATCTATGGCATA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2352474 24 - 204787373 TTTTAGGTCACTATCTATGGCATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417657 24 - 192460366 TTTTAGGTCACTATCTATGGCATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157219 24 - 19675229 TTTTAGGTCACTATCTATGGCATA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395035 24 - 16847902 TTTTAGGTCACTATCTATGGCATA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91363890 24 + 91754291 TTTTAAGTTACTATCTATGGCATA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433313 24 + 1977891 TTTTAAGTCACTATCTATGGCATA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7369770 24 - 7796314 TTTTAAGTCACTATGTATGGCATA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845203 24 + 74750902 TTTTAAGTCACTATCTATGGCATA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290850 24 - 17725628 TTTTAAGTCGCTATCTATGGCATA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381028 24 + 6778120 TTTTAAGTCACTATCTATGGCATA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18583 24 + 69927 TTTTAAGTCACTATCTATGGCATA i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32792466 24 + 98207768 TCTAAAATCACTCTTTATGGTGTA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2705368 24 - 6579706 TTTTAAGTCATTATCTATGGTATC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e micMur3.chr1 88390706 1703 + 114275543 I e canFam3.chr33 2325534 100 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I e nomLeu3.chr11 2856437 87802 - 123690457 I a score=254573.000000 s hg38.chr3_KI270934v1_alt 67618 24 + 163458 AATCCCAGGAAATGCATCCAGCAG s panTro5.chr3 2539645 24 - 202621043 AATCCCAGGAAATGCATCCAGCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129681 24 - 190779 AATCCCAGGAAATGCATCCAGCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80692 24 - 106623 AATCCCAGGAAATGCATCCAGCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944239 24 - 123690457 AATCCCAGGAAATGCATCCAGCAG i nomLeu3.chr11 I 87802 C 0 s rheMac8.chr2 2352498 24 - 204787373 AATCCCAGGGAATGCATCCAGCGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417681 24 - 192460366 AATCCCAGGGAATGCATCCAGCGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157243 24 - 19675229 AATCCCAGGGAATGCATCCAGCGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395059 24 - 16847902 AATCCCAGGAAATGCATCCAGCGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91363914 24 + 91754291 AATCCCAGGAAATGCATCCAGCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433337 24 + 1977891 AATCCCAGGAAATGCATCCAGCGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7369794 24 - 7796314 AATCCCAGGAAATGCATCCGGCGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845227 24 + 74750902 AATCCTAGGAAATGCATCCAGAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290874 24 - 17725628 AATCCTAGGAAATGAATCCAGAGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381052 24 + 6778120 AATCCTAGGAAATGCATCCAGAGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18607 24 + 69927 AATCCTAGGAAATGCATCCAGAGG i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32792490 24 + 98207768 AAACACAGTAAATATGGCCACCAA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2705392 24 - 6579706 AACTCCAGAAAGCACATCCAGGGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e micMur3.chr1 88390706 1703 + 114275543 I e canFam3.chr33 2325534 100 - 31377067 I e otoGar3.GL873829 209233 679 + 608964 I a score=20564.000000 s hg38.chr3_KI270934v1_alt 67642 2 + 163458 GC s panTro5.chr3 2539669 2 - 202621043 GC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129705 2 - 190779 GC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80716 2 - 106623 GC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944263 2 - 123690457 GC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352522 2 - 204787373 GT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417705 2 - 192460366 GT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157267 2 - 19675229 GT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395083 2 - 16847902 GC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91363938 2 + 91754291 GC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433361 2 + 1977891 GC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7369818 2 - 7796314 GC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845251 2 + 74750902 GC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290898 2 - 17725628 GC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381076 2 + 6778120 AC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18631 2 + 69927 GC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 209912 2 + 608964 GT i otoGar3.GL873829 I 679 C 0 s mm10.chr16 32792514 2 + 98207768 GC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2705416 2 - 6579706 GA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14796626 1161 - 22200726 I e micMur3.chr1 88390706 1703 + 114275543 I e canFam3.chr33 2325534 100 - 31377067 I a score=358842.000000 s hg38.chr3_KI270934v1_alt 67644 28 + 163458 CCCACTTTCATGGGGTCCCAG---CCTGTCA s panTro5.chr3 2539671 28 - 202621043 CCCACTTTCATGGGGTCCGAG---CCCGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129707 28 - 190779 CCCACTTTCATGGGGTCCGAG---CCCGTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80718 28 - 106623 CCCAATTTCATGGGGTCCGAG---CCCGTCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944265 28 - 123690457 CCCACTTTCATGGGGTCCGAG---CCCATCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352524 28 - 204787373 CCCACTTTCATGGGGTCCCAG---CCTGTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417707 28 - 192460366 CCCACTTTCATGGGGTCCCAG---CCTGTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157269 28 - 19675229 CCCACTTTCATGGGGTCCCAG---CCTGTCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395085 28 - 16847902 CCCACTTTCACGGGGTCCCAG---CCCATCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91363940 28 + 91754291 CCCACTTTCATGGGGTCCCAG---CCCGTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433363 28 + 1977891 CCCACTTTCATGGGGTCCCAG---CCCGTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7369820 28 - 7796314 CCCACTTTCATGGGGTCCCAG---CCCATCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845253 28 + 74750902 CCCACTTTCATGGGGTCCCAG---CCTGTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290900 28 - 17725628 CCCACTCTCATGGGGTCCCAG---CCCGTCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381078 28 + 6778120 CCCACTTTCATGGGGTCCCAG---CCCGTCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18633 28 + 69927 CCCACTTTCATGGGGTCCCAG---CCTGTCA i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14797787 26 - 22200726 CCCACTTTCATGGGGTCCCAG-----GGCTG i proCoq1.NW_012133858v1 I 1161 I 1 s otoGar3.GL873829 209914 27 + 608964 TCCACTTTCATGGTGTCTCAG----CTACTA i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32792516 24 + 98207768 CCCACTTGCGTG----CCCTG---CACATGC i mm10.chr16 C 0 I 3 s dasNov3.JH569502 2705418 28 - 6579706 CCCACTTTCATGGTGTCCCAGTTGCCTG--- i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88390706 1703 + 114275543 I e canFam3.chr33 2325534 100 - 31377067 I a score=962958.000000 s hg38.chr3_KI270934v1_alt 67672 67 + 163458 GAGAGCAGCAGCTTGGGCCTGATGCCTGCCTGCTGCTCCTC------------------------TGTGTGGCTATGGCTGGAATAGAAGC s panTro5.chr3 2539699 67 - 202621043 GAGAGCAGCAGCTTGGGCCTGATGCATGTCTGCTGCTCCTC------------------------TGTGTGGCTATGGCTGGAATAGAAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129735 67 - 190779 GAGAGCAGCAGCTTGGGCCTGATGCATGTCTGCTGCTCCTC------------------------TGTGTGGCTATGGCTGGAATAGAAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80746 67 - 106623 GAGAGCAGCAGCTTGGGCCTGATGCCTGCCTGCTGCTCCTC------------------------TGTGTGGCTATGGCTGGAATAGAAGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944293 67 - 123690457 GAGAGCAGCAGCTTGGGCCTGATGCCTGCCTGCTGCTCCTC------------------------TGTGTGGCTATGGCTGGAATAGAAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352552 67 - 204787373 GAGAACAGCAGCTTGGGCCTGATGCCTGCACGCTGCTCCTC------------------------TGTGCGGCTACAGCTGGAATAGAAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417735 67 - 192460366 GAGAACAGCAGCTTGGGCCTGATGCCTGCACGCTGCTCCTC------------------------TGTGCGGCTACGGCTGGAATAGAAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157297 67 - 19675229 GAGAACAGCAGCTTGGGCCTGATGCCTGCACGCTGCTCCTC------------------------TGTGCGGCTACAGCTGGAATAGAAGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395113 67 - 16847902 GAGAACAGCAGCTTGGGCCTGATGCCTGCACGCTGCTCCTC------------------------TGTGTGGCTATGGCTGGAATAGAAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91363968 67 + 91754291 GAGGGCAGCAGCTTGGGCCTGATGCCTGCATGCTGCTCCTC------------------------TGTGCGGCTATGGCTGGAATAGAAGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433391 67 + 1977891 GAGAGCAGCAGCTTGGGCCTGATGCCTGCACGCTGCTCCTC------------------------TGTGTGGCTATGGCTGGAATAGAAGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7369848 67 - 7796314 GAGAGCAGCAGCTCGGGCCTGATGCCTGCATGCTGCTCCTC------------------------TGTGTGGCTATGGCTGGAATAGAAGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845281 67 + 74750902 GAGAGTAGCAGCTTGGGCCTGATGCCTGCGTGCTGCTCCTC------------------------TGTGGCGCAACGGCTGGAATAGAAGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290928 67 - 17725628 GAGAGCAGCAGCTTCGGCCTGATGCCTGCATGCTGCTCCTC------------------------TGTGGGGCTGCGGCTGGAATAGAAGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381106 67 + 6778120 GAGAGCAGCAGCTGGGGCCTGATGCCTGCGTGCTGCTCCTC------------------------TGTGGGGCTACGGCTGGAATAGAAGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18661 67 + 69927 GACAGCAGCAGCTTGGGCCTGATGCCTGCATGCTGCTCCTC------------------------TGTGGGGCTACGGCTGGAATAGAAGC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88392409 67 + 114275543 GAGAGCCGCAACTTGGGCCAGACGCCCACATGCTGCCCCTC------------------------TGTGTGGCTGTGGCTTGAATAGAAGC i micMur3.chr1 I 1703 C 0 s proCoq1.NW_012133858v1 14797814 67 - 22200726 GAGAGCCGCAACTTGGGCCAGATGCCCACATGCTGCCCCTC------------------------TGTGTGGCTGTGGCTGGAATAGAAGC i proCoq1.NW_012133858v1 I 1 I 59 s otoGar3.GL873829 209942 64 + 608964 GAGAGCAGCAACTTGGGCCAGATGCTCACATGCTGGC---C------------------------TCTGTGGCTATGGCGGGAAGAGAAGC i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32792543 65 + 98207768 CAGGGCAGCGATTTGGACGC-ATTTGCACATTCTTTCCTTC------------------------TGTGTGGGCATTGCTGG-CTAGAGGC i mm10.chr16 I 3 C 0 s dasNov3.JH569502 2705446 89 - 6579706 GAGGGCAGCAACTCAGACCAGATGTCCACATGCTGCCCCACGAGGGTCATGTCTTTTAAATAAAATTTGGGGCCTTGCC--GAATGAATGC i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 2325534 100 - 31377067 I a score=125927.000000 s hg38.chr3_KI270934v1_alt 67739 9 + 163458 TTCCAGAGC s panTro5.chr3 2539766 9 - 202621043 TTCCAGAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129802 9 - 190779 TTCCAGAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80813 9 - 106623 TTCCAGAGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944360 9 - 123690457 TTCCAGAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352619 9 - 204787373 TTCCAGAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417802 9 - 192460366 TTCCAGAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157364 9 - 19675229 TTCCAGAGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395180 9 - 16847902 TTCCAGAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364035 9 + 91754291 TTCCAGAGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433458 9 + 1977891 TTCCAGAGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7369915 9 - 7796314 TTCCAGAGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845348 9 + 74750902 TTCCAGAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17290995 9 - 17725628 TTCCAGAAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381173 9 + 6778120 TTCCagagc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18728 9 + 69927 TTCCAGAGC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88392476 9 + 114275543 TTCCAAAGC i micMur3.chr1 C 0 I 382 s otoGar3.GL873829 210006 9 + 608964 TTCCAGAGC i otoGar3.GL873829 C 0 I 53 s mm10.chr16 32792608 9 + 98207768 TTCCAAGGC i mm10.chr16 C 0 I 54 s dasNov3.JH569502 2705535 8 - 6579706 ATATTGAT- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14797881 59 - 22200726 I e canFam3.chr33 2325534 100 - 31377067 I a score=26002.000000 s hg38.chr3_KI270934v1_alt 67748 2 + 163458 TG s panTro5.chr3 2539775 2 - 202621043 TG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129811 2 - 190779 TG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80822 2 - 106623 TG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944369 2 - 123690457 TG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352628 2 - 204787373 TG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417811 2 - 192460366 TG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157373 2 - 19675229 TG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395189 2 - 16847902 TG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364044 2 + 91754291 TG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433467 2 + 1977891 TG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7369924 2 - 7796314 TG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845357 2 + 74750902 TG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17291004 2 - 17725628 TG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381182 2 + 6778120 tg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18737 2 + 69927 TG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 210068 2 + 608964 TA i otoGar3.GL873829 I 53 C 0 s mm10.chr16 32792671 2 + 98207768 CG i mm10.chr16 I 54 C 0 s dasNov3.JH569502 2705543 2 - 6579706 TA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14797881 59 - 22200726 I e micMur3.chr1 88392485 382 + 114275543 I e canFam3.chr33 2325534 100 - 31377067 I a score=1417774.000000 s hg38.chr3_KI270934v1_alt 67750 114 + 163458 CTCAACAGTGCACTtcacagaaggtcagagctggacaggacttcagtgcccattccaaccctctcc---------------------------------------------------------------------------------aaatacaggtggagaaactga------------ggccc-----------------------------------------------------------------------------------------agaga----gggacag--ggactt-gccc s panTro5.chr3 2539777 115 - 202621043 CTCAACAGTGAATTtcatagaaggtcagagctggacaggacttcagtgcccattccaaccctctcc---------------------------------------------------------------------------------aaatacaggtggagaaactga------------ggccc-----------------------------------------------------------------------------------------agaga----gggacag--ggacttagcac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129813 114 - 190779 CTCAACAGTGAATTtcatagaaggtcagagctggacaggacttcagtgcccattccaaccctctcc---------------------------------------------------------------------------------aaatacaggtggagaaactga------------ggccc-----------------------------------------------------------------------------------------agaga----gggacaa--ggactt-gccc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80824 113 - 106623 CTCAACAGTGAA-Ttcatagaaggtcagagctggacaggacttcagtgcccattccaaccctctcc---------------------------------------------------------------------------------aaatacaggtagagaaactga------------ggccc-----------------------------------------------------------------------------------------agaga----gggacag--ggactt-gccc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944371 114 - 123690457 CTCAACAGTGCACTtcatggaaggtcagagctggacaggacttcagtgcccattccaaccctctcc---------------------------------------------------------------------------------aactatgggtggggaaactga------------ggccc-----------------------------------------------------------------------------------------agaga----gggacag--ggactt-gccc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352630 114 - 204787373 CTTAACAGTGAACTtcatagaaggtcagagctggacaggacttcggtgcccatcccaaccctctcc---------------------------------------------------------------------------------aactacaggtggggaaactga------------ggccc-----------------------------------------------------------------------------------------ggaga----gggagag--ggactt-gccc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417813 114 - 192460366 CTTAACAGTGAACTtcatagaaggtcagagctggacaggacttcggtgcccatcccaaccctctcc---------------------------------------------------------------------------------aactacaggtggggaaactga------------ggccc-----------------------------------------------------------------------------------------ggaga----gggagag--ggactt-gccc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157375 114 - 19675229 CTTAACAGTGAACTtcatagaaggtcagagctggacaggacttcggtgcccatcccaaccctctcc---------------------------------------------------------------------------------aactacaggtggggaaactga------------ggccc-----------------------------------------------------------------------------------------ggaga----gggagag--ggactt-gccc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395191 114 - 16847902 CTCAACAGTGAACTtcatagaaggtcagagctggacaggacttcggtgcccatcccaaccctctcc---------------------------------------------------------------------------------aactacaggtggggaaactga------------ggccc-----------------------------------------------------------------------------------------ggaga----gggagag--ggactt-gccc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364046 195 + 91754291 CTCAACAGTGAACTtcatagaaggtcagagctggacaggacttcggtgcccatcccaaccctctccaactacaggtggggaaactgaggctcggagagggagagggacttgcccaaggtcacttgtgttgttagagacagagcCAAAAACtacaggtggggaaactga------------ggccc-----------------------------------------------------------------------------------------ggaga----gggagag--ggactt-gccc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433469 114 + 1977891 CTCAACAGTGAACTtcatagaaggtcagagctgaacaggacttcggtgcccatcccaaccctctcc---------------------------------------------------------------------------------aactacaggtggggaaactga------------ggccc-----------------------------------------------------------------------------------------ggaga----gggagag--ggactt-gccc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7369926 111 - 7796314 CTCAACAGTGAACTtcat---aggtcagagctggacaggacttcggcgcccatcccaaccctctcc---------------------------------------------------------------------------------aactacaggtggggaaactga------------ggccc-----------------------------------------------------------------------------------------ggaga----gggagag--ggactt-gccc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845359 114 + 74750902 CTCAACAGTGAACTtcacagaagttcagagctggaaaggacttcagtgcccatcccaagcctctcc---------------------------------------------------------------------------------aactacaggtggagaaactga------------ggccc-----------------------------------------------------------------------------------------agaga----gggagag--ggactt-ggtc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17291006 114 - 17725628 CTCAACAGTGAACTtcatagaagttcagagcggaaaaggacttcagtgcccatcccaagcctctcc---------------------------------------------------------------------------------tactacaggtggggaaactga------------ggccc-----------------------------------------------------------------------------------------agaga----gggagac--ggactt-ggcc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381184 114 + 6778120 ctcaccagtgaacttcatagaagttcagagctggaaaggacttcagtgcccatcccaagcctctcc---------------------------------------------------------------------------------aactacaggtgaagaaactga------------ggccc-----------------------------------------------------------------------------------------agaga----gggagag--ggactt-ggcc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18739 114 + 69927 CTCAACAGTGAACTtcatagaagttcagagctggaaaggacttcagtgcccaccccaagtctctcc---------------------------------------------------------------------------------gactacaggtagagaaaggga------------ggccc-----------------------------------------------------------------------------------------agaga----gggagag--ggactc-ggcc i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14797940 113 - 22200726 CTCAACAGTTAACTtcatagaaggtcagagctggagaggacttcagggctcatccccaccctgtcc---------------------------------------------------------------------------------aactacaagtggagaaacgga------------ggcc------------------------------------------------------------------------------------------agaga----gggagag--ggactt-gcct i proCoq1.NW_012133858v1 I 59 C 0 s otoGar3.GL873829 210070 203 + 608964 CTCAACAGTTAACTtcacaaaagatcagagctgaagaggacttcagtgctcatccccaccctctcc---------------------------------------------------------------------------------cactacaagtggagaaactga------------ggccctagagcagctgttctcagcctgtgggtcacaacctatagaaattgtattaaagggtcacggcattaggaaggttgagaaccactgcccgagagg----aagaggg--ggactt-gtct i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32792673 115 + 98207768 CCCAATAGTTAACTTCACAGAAG-TTAGACCTGGAAAAGA---TGGCGCTCA-----------TCC---------------------------------------------------------------------------------ACCACAAAGCGAAGAAACTAGCTGCTTTTTACCAGCCA-----------------------------------------------------------------------------------------GGAGATCAGAGGAGAG--GGGCAG-GTCC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2705545 115 - 6579706 CTCAACAGTTAACTttacaggaggccagagctagaaaggactttagtgttcat-ccaatctcttcc---------------------------------------------------------------------------------agctaccagtggagaaactga------------ggccc-----------------------------------------------------------------------------------------agaaa----gagagaggtggattt-gtcc i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88392485 382 + 114275543 I e canFam3.chr33 2325534 100 - 31377067 I a score=430573.000000 s hg38.chr3_KI270934v1_alt 67864 40 + 163458 aaggtcactcgggt-tgttacaggc-a----------gagccga-gaccgcaa s panTro5.chr3 2539892 42 - 202621043 aagggcactcggttgtgttacaggc-a----------gagccgaggaccgcaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129927 40 - 190779 aaggtcactcgggt-tgttacaggc-a----------gagccga-gaccgcaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80937 40 - 106623 aaggtcactcgggt-tgttacaggc-a----------gagccaa-gaccgcaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944485 40 - 123690457 aaggtcacttgggt-tgttagaggc-a----------gagccga-gaccgcaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352744 40 - 204787373 aaggtcactcgggt-tgttagaggc-a----------gagctga-gactgaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417927 40 - 192460366 aaggtcactcgggt-tgttagaggc-a----------gagctga-gactgaaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157489 40 - 19675229 aaggtcactcgggt-tgttagaggc-a----------gagctga-gactgaaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395305 40 - 16847902 aaggtcactcgggt-tgttagaggc-a----------gagctga-gactgaaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364241 40 + 91754291 aaggtcactcgggt-tgttagaggc-a----------gagctga-gactgaaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433583 40 + 1977891 aaggtcactcgggt-tgttagaggc-a----------gagttga-gactgaaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370037 40 - 7796314 aagatcactcgggt-tgttagaggc-a----------gagctga-gaccaaaa i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845473 40 + 74750902 agggccgctcgggc-tgttaagggc-a----------gagctga-gatggcaa i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17291120 40 - 17725628 gaggccactcgggc-catcggaggc-a----------gaactga-gacggcaa i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381298 40 + 6778120 aaggccactcgggc-cgtgagaggc-a----------gagctga-ggtggcaa i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18853 40 + 69927 aaggccactcgggc-tgttaaaggc-a----------gagctga-gacggcaa i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14798053 40 - 22200726 aaggtcactcaggt-tattaatggc-a----------aaaccaa-gatctcaa i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 210273 38 + 608964 gaggtcactcaggt-tattaatgg--a----------gagccaa-gaTCTCA- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32792788 36 + 98207768 AAGGTCTCTCAGGT-TA----AAGC-A----------CAGCCAA-GATCTCAA i mm10.chr16 C 0 I 113 s canFam3.chr33 2325634 41 - 31377067 AAGGTCACTTAACA-ACTTAAGGGCAA----------AAACCAG-GATCTCAA i canFam3.chr33 I 100 C 0 s dasNov3.JH569502 2705660 48 - 6579706 aaagtctcttaggt-tgctaagagc-aacctaagtttgagcaaa-actcaa-- i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88392485 382 + 114275543 I a score=283530.000000 s hg38.chr3_KI270934v1_alt 67904 20 + 163458 ac-catttctccggact-tcca s panTro5.chr3 2539934 22 - 202621043 acacatttctccggactgtcca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129967 20 - 190779 ac-catttctccggact-tcca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80977 20 - 106623 ac-catttctccggact-tcca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944525 20 - 123690457 ac-catttctccggact-tcca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352784 20 - 204787373 ac-cgtttctccagact-tcca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417967 20 - 192460366 ac-cgtttctccagact-tcca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157529 20 - 19675229 ac-cgtttctccagact-tcca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395345 20 - 16847902 ac-cgtttctccagact-tcca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364281 20 + 91754291 ac-catttttccagact-tcca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433623 20 + 1977891 ac-cgtttctccagact-tcca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370077 20 - 7796314 ac-catttttccagact-tcca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845513 20 + 74750902 ac-catgtctccagact-tcca i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17291160 20 - 17725628 ac-cgtttctccagact-tccg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381338 20 + 6778120 ac-cgtttccccagacg-tccg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18893 20 + 69927 ac-catttctccagact-tcca i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14798093 20 - 22200726 ac-catttcttcagact-tcca i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 210311 18 + 608964 ---CATTTCCCCAGCCT-TTCA i otoGar3.GL873829 C 0 M 240 s mm10.chr16 32792937 20 + 98207768 at-cattacatcacaca-taca i mm10.chr16 I 113 C 0 s canFam3.chr33 2325675 19 - 31377067 --ACATTTCTCCAGACT-TCCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2705708 20 - 6579706 ac-tatttctccagact-tcca i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88392485 382 + 114275543 I a score=88739.000000 s hg38.chr3_KI270934v1_alt 67924 7 + 163458 tccccac s panTro5.chr3 2539956 7 - 202621043 tccccac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129987 7 - 190779 tccccac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80997 7 - 106623 tccccac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944545 7 - 123690457 tctccac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352804 7 - 204787373 tctccac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417987 7 - 192460366 tctccac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157549 7 - 19675229 tctccac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395365 7 - 16847902 tctccac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364301 7 + 91754291 tctccac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433643 7 + 1977891 tctccac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370097 7 - 7796314 tctccac i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845533 7 + 74750902 tctccac i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17291180 7 - 17725628 tctccac i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381358 7 + 6778120 tctccac i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18913 7 + 69927 cctccac i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14798113 7 - 22200726 gccctgc i proCoq1.NW_012133858v1 C 0 I 43 s mm10.chr16 32792957 7 + 98207768 tcactac i mm10.chr16 C 0 I 54 s canFam3.chr33 2325694 7 - 31377067 ACCCCAC i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2705728 7 - 6579706 gctcagc i dasNov3.JH569502 C 0 I 1 e micMur3.chr1 88392485 382 + 114275543 I e otoGar3.GL873829 210329 240 + 608964 M a score=476833.000000 s hg38.chr3_KI270934v1_alt 67931 52 + 163458 ccctttccatacacaac--cc-tccat----------------ctgCCTTTTCCTGATTTCGCCAAGAACC s panTro5.chr3 2539963 50 - 202621043 ccc-ttccatacacaac--ccatccat----------------ctgCCTTTTCGTGA-TTCG-CAAGAACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129994 52 - 190779 ccctttccatacacaac--cc-tccat----------------ctgCCTTTTCCTGATTTCGCCAAGAACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81004 52 - 106623 ccctttccatacacaac--cc-tccat----------------ctgCCTTTTCCTGATTTCGCCAAGAACC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944552 50 - 123690457 ct--ttccatacacaac--cC-TCCAT----------------CTGCCTTTTCCTGATTTCGTCAAGAACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352811 52 - 204787373 ctctttccatacacaac--cc-tccat----------------ctgccTTTTCCTGATTTCGCCAAGAACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192417994 52 - 192460366 ctctttccatacacaac--cc-tccat----------------ctgccTTTTCCTGATTTCGCCAAGAACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157556 52 - 19675229 ctctttccatacacaac--cC-TCCAT----------------CTGCCTTTTCCTGATTTCGCCAAGAACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395372 52 - 16847902 ctctttccatacacaac--cC-TCCAT----------------CTGCCTTTTCCTGATTTCGCCAAGAACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364308 52 + 91754291 ctctttccatacacaac--cc-tccat----------------ctgCCTTTTCCCGATTTCACCAAGAACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433650 52 + 1977891 ctctttccatacacaac--cC-TCCAT----------------CTGCCTTTTCCTGATTTCGCCAAGAACC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370104 52 - 7796314 ctctttccatacacaac--cc-tccat----------------ctgccTTTTCCTGATTTCGCCAAGAACC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845540 50 + 74750902 g---ctctccacacgctg-cc-tccat----------------ctgccTTTTCCTGATTTAGCCAAGAACC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17291187 49 - 17725628 g---ctctccatacaac--cc-tccat----------------ctgccTTTTCCTGATTTCGCCAAGAACC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381365 51 + 6778120 g---ctctccacacacaaccc-tccat----------------ctgcctTTTCCTGATTTCGCCAAGAACC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18920 49 + 69927 g---gtccatacacagc--cc-tccat----------------ctgcctTTTCCTGATTTCGCCAAGAACC i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32793018 57 + 98207768 aacgtcacctacacatc--ac-TACATCTCATATACATCTTAGCTGCTTTTTACCGACCC----------- i mm10.chr16 I 54 C 0 s canFam3.chr33 2325702 52 - 31377067 GTGTTTCCATACACCTC--CC-TAACT----------------GTCCTTGTTTCTGATTTTGGGAAGCATC i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2705736 52 - 6579706 ctctttccatatgccac--cc-tAACT----------------CTGTATATTACTGATTTTGGCAAGAACA i dasNov3.JH569502 I 1 C 0 e proCoq1.NW_012133858v1 14798120 43 - 22200726 I e micMur3.chr1 88392485 382 + 114275543 I e otoGar3.GL873829 210329 240 + 608964 M a score=140830.000000 s hg38.chr3_KI270934v1_alt 67983 10 + 163458 ACTAGAAGAT s panTro5.chr3 2540013 10 - 202621043 ACTAGAAGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130046 10 - 190779 ACTAGAAGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81056 10 - 106623 ACTAGAAGAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944602 10 - 123690457 ACTAGAAGAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352863 10 - 204787373 ACTAGAAGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418046 10 - 192460366 ACTAGAAGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157608 10 - 19675229 ACTAGAAGAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395424 10 - 16847902 TCTAGAAGAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364360 10 + 91754291 ACTAGAAGAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433702 10 + 1977891 TCTAGAAGAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370156 10 - 7796314 ACTAGAAGAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845590 10 + 74750902 ACTGGAAGAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17291236 10 - 17725628 ACTGGAAGAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381416 10 + 6778120 ACTGGAAGAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18969 10 + 69927 ACTGGAAAAC i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14798163 10 - 22200726 GCTAGAAGAT i proCoq1.NW_012133858v1 I 43 C 0 s mm10.chr16 32793075 10 + 98207768 ACCAGGAGGT i mm10.chr16 C 0 C 0 s canFam3.chr33 2325754 10 - 31377067 ACTAGAAGAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2705788 10 - 6579706 ATTAGAAGAT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88392485 382 + 114275543 I e otoGar3.GL873829 210329 240 + 608964 M a score=220211.000000 s hg38.chr3_KI270934v1_alt 67993 23 + 163458 CACGAAGAGGCA-ACAGCAGG-AGC- s panTro5.chr3 2540023 24 - 202621043 CACGACAGAGCA-ACATCAGGCAGC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130056 23 - 190779 CACGAAGAGGCA-ACATCAGG-AGC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81066 23 - 106623 CACGAAGAGGCA-ACATCAGA-AGC- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944612 23 - 123690457 CACGAAGAGGCG-ACATCAGG-AGC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352873 23 - 204787373 CACGAAGCGGCA-ACATCAGG-GGC- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418056 23 - 192460366 CACGAAGCGGCA-ACATCAGG-GGC- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157618 23 - 19675229 CACGAAGCGGCA-ACATCAGG-GGC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395434 23 - 16847902 CACGAAGTGGCA-ACATCAGG-GGC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364370 23 + 91754291 CACGAAGCGGCA-ACATCAGG-GGC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433712 23 + 1977891 CACGAAGCGGCA-ACATCAGG-GGC- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370166 23 - 7796314 CACGAAGTGGCA-ACATCAGG-GGC- i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17291246 23 - 17725628 CACGAAGAGGCG-ACGTCAGG-GGC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381426 23 + 6778120 CACGAAGAGGCA-ACGTCAGG-GGC- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 18979 23 + 69927 CACGAAGAGGCA-ACGTCAGG-GGC- i aotNan1.NW_018503669v1 C 0 I 48 s proCoq1.NW_012133858v1 14798173 23 - 22200726 CACAAAGAGGCA-GCATCAGA-GAG- i proCoq1.NW_012133858v1 C 0 I 1 s mm10.chr16 32793085 18 + 98207768 CATGAAATGCCA------AGG-AGA- i mm10.chr16 C 0 C 0 s canFam3.chr33 2325764 24 - 31377067 CATGAAAAGGGGGGCATCAGA-GAC- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2705798 24 - 6579706 CATAAAGAGATG-ATGTCAGT-GAGA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88392485 382 + 114275543 I e calJac3.chr17 73845600 0 + 74750902 C e otoGar3.GL873829 210329 240 + 608964 M a score=464945.000000 s hg38.chr3_KI270934v1_alt 68016 47 + 163458 AGGCTCTGAGTAGGC-TCCAGATCCTTCCCTCCTCTCCACTCCTCAAG s panTro5.chr3 2540047 46 - 202621043 AGGCT-TGAGTAGGC-TCCAGATCCTTCCTTCCTCTCCACTCCTCAAG i panTro5.chr3 C 0 I 94405 s panPan2.chrUn_NW_014024201v1 130079 47 - 190779 AGGCTCTGAGTAGGC-TCCAGATCCTTCCTTCCTCTCCACTCCTCAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81089 47 - 106623 AGGCTCTGAGTAGGC-TCCAGATCCTTCCTTTCTCTCCACTCCTCAAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944635 47 - 123690457 AGGCTCTGAATAGGC-TCCAGATCCTTCCTTCCTCTCCACTCCTCAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352896 47 - 204787373 AGGCTCTGAATAGGC-TCCAGATCCTTCCTTCCCCTCCACTCCTCAAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418079 47 - 192460366 AGGCTCTGAATAGGC-TCCAGATCCTTCCTTCCCCTCCACTCCTCAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157641 47 - 19675229 AGGCTCTGAATAGGC-TCCAGATCCTTCCTTCCCCTCCACTCCTCAAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395457 47 - 16847902 AGGCTCCAAATAGGC-TCCAGATCCTTCCTTCCTCTCCACTCCTCAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364393 47 + 91754291 AGGCTCCAAATAGGC-TCCAGATCCTTCCTTCCTCTCCACTCCTCAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433735 47 + 1977891 AGGCTCCAAATAGGC-TCCAGATCCTTCCTTCCTCTCCACTCCTCAAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370189 47 - 7796314 AGGCTCCGAATAGGC-TCCAGATCCTTCCTTCCTCTCCACTCCTCAAG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17291269 44 - 17725628 --CCTCCAAATGGGC-CCT-GACCCTCCCTTCCTCTCCGCTCCCCAAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381449 44 + 6778120 --ACTCCAAATAGGC-CTC-GACCCTCCGTTCCTCTCCGCTCCCCAAG i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14798197 48 - 22200726 GGGCTCAGGACAGGCTTCCAGGTCCATCCTTCCTCCCCACTCCTTAAG i proCoq1.NW_012133858v1 I 1 C 0 s mm10.chr16 32793103 48 + 98207768 GGGTGCAATATTGGCCTTTAGCTCCTTCTTTCAACTCAACTCCTTAAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2325789 47 - 31377067 GGGCTCAGAATAGGC-CCCAGATCCTTCCTCCCTCCCCACCCCCTGAG i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2705822 48 - 6579706 TGGCTTAGAGTAGGCCCCCGGATTCTTCCTTCCTCTGTAGTTCTTAAG i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 19002 48 + 69927 I e micMur3.chr1 88392485 382 + 114275543 I e calJac3.chr17 73845600 0 + 74750902 C e otoGar3.GL873829 210329 240 + 608964 M a score=24931.000000 s hg38.chr3_KI270934v1_alt 68063 5 + 163458 TGCGG s panTro5.chr3 2634498 5 - 202621043 TGCGG i panTro5.chr3 I 94405 C 0 s panPan2.chrUn_NW_014024201v1 130126 5 - 190779 TGCGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81136 5 - 106623 TGCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944682 5 - 123690457 TGCGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352943 5 - 204787373 CGCGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418126 5 - 192460366 CGCGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157688 5 - 19675229 CGCGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395504 5 - 16847902 CGTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364440 5 + 91754291 CGCGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433782 5 + 1977891 CGCGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370236 5 - 7796314 CGCAG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17291313 5 - 17725628 CTCGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381493 5 + 6778120 CTCGG i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14798245 5 - 22200726 CATGT i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 32793151 2 + 98207768 -GC-- i mm10.chr16 C 0 C 0 s canFam3.chr33 2325836 5 - 31377067 CACGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2705870 5 - 6579706 CATGA i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 19002 48 + 69927 I e micMur3.chr1 88392485 382 + 114275543 I e calJac3.chr17 73845600 0 + 74750902 C e otoGar3.GL873829 210329 240 + 608964 M a score=12376.000000 s hg38.chr3_KI270934v1_alt 68068 1 + 163458 A s panTro5.chr3 2634503 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130131 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81141 1 - 106623 A i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944687 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352948 1 - 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418131 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157693 1 - 19675229 A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395509 1 - 16847902 A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364445 1 + 91754291 A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433787 1 + 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370241 1 - 7796314 A i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17291318 1 - 17725628 A i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381498 1 + 6778120 A i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19050 1 + 69927 A i aotNan1.NW_018503669v1 I 48 C 0 s canFam3.chr33 2325841 1 - 31377067 A i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2705875 1 - 6579706 A i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14798250 0 - 22200726 C e mm10.chr16 32793153 0 + 98207768 C e micMur3.chr1 88392485 382 + 114275543 I e calJac3.chr17 73845600 0 + 74750902 C e otoGar3.GL873829 210329 240 + 608964 M a score=366745.000000 s hg38.chr3_KI270934v1_alt 68069 32 + 163458 GACGTCCTGGAAACTCCGC-ATCCCAAATCCCC s panTro5.chr3 2634504 31 - 202621043 GAT-TCCTGGAAACTCCGCCATCCCAAATCCC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130132 32 - 190779 GACGTCCTGGAAACTCCGC-ATCCCAAATCCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81142 32 - 106623 GACGTCCTGGAAACTCCGC-ATCCCAAATCCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944688 32 - 123690457 GACGTCCTGGAAACTCCGC-ATCCCAAATCCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352949 31 - 204787373 GACGTCCTGGAAACTCCGC-ATCCCAAAT-CCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418132 31 - 192460366 GACGTCCTGGAAACTCCGC-ATCCCAAAT-CCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157694 31 - 19675229 GACGTCCTGGAAACTCCGC-ATCCCAAAT-CCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395510 32 - 16847902 GACGCCCTGGAAACTCCGC-ATCCCAAATCCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364446 32 + 91754291 GACGTCCTGGAAACTCCGC-ATCCCAAATCCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433788 32 + 1977891 GACGTCCTGGAAACTCCGC-ATCCCAAATCGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370242 32 - 7796314 GACGTCCTGGAAACCCCGC-ATCCCAAATCCCC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17291319 32 - 17725628 GATGTCCTGGAAACGCCGC-ATCCCAGGTCCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381499 32 + 6778120 GATGTCCTGGAAACTCCGC-AGCCCAAGTCCCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19051 32 + 69927 GATGTCCTGGAAACTCCGC-GTCCCCAAGCCCC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88392867 32 + 114275543 GACGTCCTGGAAACTCCAA-ATCCCAAATCCCC i micMur3.chr1 I 382 I 72 s proCoq1.NW_012133858v1 14798250 32 - 22200726 GACGTCCTGGAAACTCCAA-ATCCCAAACCCCC i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 32793153 14 + 98207768 -------------------TACTCCAAATCTCC i mm10.chr16 C 0 C 0 s canFam3.chr33 2325842 32 - 31377067 GACATCCTGGCAAGTCCAA-ACCCTGAATCCCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2705876 31 - 6579706 GACATCCTGGACACTCTA--ACCTCAAATCCTT i dasNov3.JH569502 C 0 C 0 e calJac3.chr17 73845600 0 + 74750902 C e otoGar3.GL873829 210329 240 + 608964 M a score=102002.000000 s hg38.chr3_KI270934v1_alt 68101 8 + 163458 GAAGATCA s panTro5.chr3 2634535 8 - 202621043 GAAGATCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130164 8 - 190779 GAAGATCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81174 8 - 106623 GAAGATCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944720 8 - 123690457 GAAGATCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352980 8 - 204787373 AAAGATCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418163 8 - 192460366 AAAGATCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157725 8 - 19675229 AAAGATCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395542 8 - 16847902 AAAGATCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364478 8 + 91754291 AAAGATCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433820 8 + 1977891 AAAGATCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370274 8 - 7796314 AAAGATCA i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17291351 8 - 17725628 GAAGATCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381531 8 + 6778120 AAAGATCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19083 8 + 69927 AAAGGTCA i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14798282 8 - 22200726 AAGGATCA i proCoq1.NW_012133858v1 C 0 I 64 s mm10.chr16 32793167 8 + 98207768 AAAAATCT i mm10.chr16 C 0 I 1 s canFam3.chr33 2325874 7 - 31377067 -AAGCTCA i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 2705907 8 - 6579706 GAAGATCA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88392899 72 + 114275543 I e calJac3.chr17 73845600 0 + 74750902 C e otoGar3.GL873829 210329 240 + 608964 M a score=5901.000000 s hg38.chr3_KI270934v1_alt 68109 4 + 163458 -CCAG s panTro5.chr3 2634543 3 - 202621043 -C-AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130172 4 - 190779 -CCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81182 4 - 106623 -CCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944728 4 - 123690457 -CCGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352988 4 - 204787373 -CCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418171 4 - 192460366 -CCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157733 4 - 19675229 -CCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395550 4 - 16847902 -CCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364486 4 + 91754291 -CCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433828 4 + 1977891 -CCAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370282 4 - 7796314 -CCAG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17291359 4 - 17725628 -CCGT i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 6381539 4 + 6778120 -CCAT i cebCap1.NW_016107444v1 C 0 I 1 s aotNan1.NW_018503669v1 19091 4 + 69927 -CCGT i aotNan1.NW_018503669v1 C 0 I 1 s mm10.chr16 32793176 3 + 98207768 -TCA- i mm10.chr16 I 1 C 0 s canFam3.chr33 2325884 3 - 31377067 -CCG- i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 2705915 4 - 6579706 CACA- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14798290 64 - 22200726 I e micMur3.chr1 88392899 72 + 114275543 I e calJac3.chr17 73845600 0 + 74750902 C e otoGar3.GL873829 210329 240 + 608964 M a score=493502.000000 s hg38.chr3_KI270934v1_alt 68113 44 + 163458 CAGGA-G--CCAC-TTACCTGCACTCACGTCTGTGGTCGGCCTCGTCC s panTro5.chr3 2634546 43 - 202621043 CAGGA-G--CCAC-TTACCTGCACTCACGTCTGTGGTCGGCCT-GTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130176 44 - 190779 CAGGA-G--CCAC-TTACCTGCACTCACGTCTGTGGTCGGCCTCGTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81186 44 - 106623 CAGGA-G--CCAC-TTACCTGCACTCACGTCTGTGGTCGGCCTCGTCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944732 44 - 123690457 CAAGA-A--CCAC-TTACCTGCACTCCTGTCTGCGGTCGGCCTCGTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2352992 44 - 204787373 CAGGA-G--CCAC-TTACCTGCACTCACGTCTGTGGTCGGCCTCGTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418175 44 - 192460366 CAGGA-G--CCAC-TTACCTGCACTCACGCCTGTGGTCGGCCTCGTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157737 44 - 19675229 CAGGA-G--CCAC-TTACCTGCACTCACGCCTGTGGTCGGCCTCGTCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395554 44 - 16847902 CAGGA-G--CCAC-TTACCCGCACTCACGTCTGTGGTCGGCCTCGTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364490 44 + 91754291 CAGGA-G--CCAC-TTACCTGCACTCACGTCTGTGGTCGGCCTCGTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433832 44 + 1977891 CAGGA-G--CCAC-TTACCTGCACTCACGTCTGTGGTCGGCCTCGTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370286 45 - 7796314 CAGGA-G--CCACTTTACCTGCACTCACGTCTGTGGTCGGCCTCGTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845600 44 + 74750902 CAGGG-G--CCAC-CTACCTGCGCTGACGTTTGTGGTCTGCCCCGTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17291364 44 - 17725628 CGGGA-G--CCAC-TTACCTGTGCTGACGTCTGTGGTCTGCCCCGGCG i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 6381544 44 + 6778120 CGGGA-G--CCAC-TTACCTGGGCTAACGTTTGTGGTCTGCCCCGTCC i cebCap1.NW_016107444v1 I 1 C 0 s aotNan1.NW_018503669v1 19096 44 + 69927 CGGGA-G--CCAC-TTACCTGCGCTAATGGTTGTGGTCCGCCCCGTCT i aotNan1.NW_018503669v1 I 1 C 0 s mm10.chr16 32793179 46 + 98207768 TGGGA-GTTTTGC-TTACCTGGATCATGTTTTGTGGTTTTCCTTATCC i mm10.chr16 C 0 C 0 s canFam3.chr33 2325887 44 - 31377067 AGGGA-G--CCAC-TTACCCGCAGTGGCTTCTGTGGTCCACCTTGTCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2705919 45 - 6579706 TGGGACA--CCAC-TTACCTGTAGTAAATTTTGTGGTCTGCCTTGTCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14798290 64 - 22200726 I e micMur3.chr1 88392899 72 + 114275543 I e otoGar3.GL873829 210329 240 + 608964 M a score=98816.000000 s hg38.chr3_KI270934v1_alt 68157 14 + 163458 GGGCAGT--CGTGGGC s panTro5.chr3 2634589 15 - 202621043 GG-CAGTGTCGTGGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130220 14 - 190779 GGGCAGT--CATGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81230 14 - 106623 GGGCAGT--CGTGGGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944776 14 - 123690457 GAGCAGT--GGTGGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2353036 14 - 204787373 GAGCAGT--GGTGGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418219 14 - 192460366 GAGCAGT--GGTGGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157781 14 - 19675229 GAGCAGT--GGTGGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395598 14 - 16847902 GAGCAGT--GGTGGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364534 14 + 91754291 GAGCAGC--GGTGGGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433876 14 + 1977891 GAGCAGT--GGTGGGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370331 14 - 7796314 GAGCAGT--GGTGGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845644 14 + 74750902 GGGCAGT--GGGGGAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17291408 14 - 17725628 GAGCGGT--GCGGGAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381588 14 + 6778120 GAGCAGT--GGGGGAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19140 2 + 69927 GA-------------- i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 210577 14 + 608964 GAGCAGT--GGCAGCT i otoGar3.GL873829 M 240 C 0 s mm10.chr16 32793225 11 + 98207768 AAGCAGT--GGAT--- i mm10.chr16 C 0 C 0 s canFam3.chr33 2325931 14 - 31377067 GAACCAC--AGTGGGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2705964 14 - 6579706 GGGCAGT--GGTGTGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14798290 64 - 22200726 I e micMur3.chr1 88392899 72 + 114275543 I a score=899124.000000 s hg38.chr3_KI270934v1_alt 68171 72 + 163458 GTGGCTGTT-GGGGGCTTCA---------------------TC---GTGGTCTTCGCTGAGGTT-GTGATCTTGGCTAAGGTGCTGTTCGTCCCTCGG s panTro5.chr3 2634604 73 - 202621043 GTGGCTGTTTGGGGGCTTCA---------------------TC---GTGGTCTTCGCTGAGGTTTGTGGTCTTGGC-AAGGTGCTGTTCGTCCCTCGG i panTro5.chr3 C 0 T 94346 s panPan2.chrUn_NW_014024201v1 130234 72 - 190779 GTGGCTGTT-GGGGGCTTCA---------------------TC---GTGGTCTTCGCTGAGGTT-GTGGTCTTGGCTAAGGTGCTGTTCGTCCCTCGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81244 72 - 106623 GTGGCTGTT-GGGGGCTTCA---------------------TC---GTGGTCTTCGCTGAGGTT-GTGGTCTTGGCTAAGGTGCTGTTCGTCCCTCGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944790 72 - 123690457 ATGGCTGTT-GGGGGCTTCA---------------------TC---AGGGTTTTCGCTGAGGTC-GTGGTCTTGGCTAAGGAGCTGTTCGTCCCTTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2353050 72 - 204787373 GTGGCTGTT-GGGGGCTTCA---------------------TC---GGGGTCTTCGCTGAGGCT-GTGGTCTTGGCTAAGGTGCTGTTCATCCCTCGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418233 72 - 192460366 GTGGCTGTT-GGGGGCTTCA---------------------TC---GGGGTCTTCGCTGAGGCT-GTGGTCTTGGCTAAGGTGCTGTTCATCCCTCGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157795 72 - 19675229 GTGGCTGTT-GGGGGCTTCA---------------------TC---GGGGTCTTCGCTGAGGCT-GTGGTCTTGGCTAAGGTGCTGTTCATCCCTCGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395612 72 - 16847902 GTGGCTGTT-GGGGGCTTCA---------------------TC---GGGGGCTTCGCTGAGGCT-GTGGTCTTGGCTAAGGTGCTGTTCGTCCCTCGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364548 72 + 91754291 GTGGCTGTT-GGGGGCTTCA---------------------TT---GGGGTCTTCGCTGAGGCT-GTGGTCTTGGCTAAGGTGCTGTTCGTCCCTCGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433890 72 + 1977891 GTGGCTGTT-GGGGGCTTCA---------------------TC---GGGGTCTTCGCTGAGGCT-GTGGTCTTGGCTAAGGTGCTGTTCGTCCCTCGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370345 72 - 7796314 GTGGCTGTT-GGGGGCTTCA---------------------TC---GGGGTCTTCGCTGAGGCT-GTGGTCTTGGCTAAGGTGCTGTTCGTCCCTCGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845658 54 + 74750902 ATGGCTGTC-AGGGGCTCCA---------------------TC----------------------GGGGTCTTGGCTGAGGTGCTGCTGGTTCCTGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17291422 54 - 17725628 GTGGCTGCT-AGGGGCTCCC---------------------GC----------------------GGGGTCTCGGCTGAGGTGCTGTTGGTTCCTGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381602 54 + 6778120 GTGGCTGTT-GGGGGCTCCA---------------------TC----------------------GGGGTCTTGGCCGAGGTGCTGTTGGTTCCCGGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19142 51 + 69927 ---GCTGTC-AGGGGCTCCG---------------------TC----------------------GGGGTCTTGGCTGAGGTGCTGCCGGTTCCCGGG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88392971 72 + 114275543 GTGGCCGTC-GGGGGCTTTG---------------------CC---GAGGTCTTTGCTGAGGTC-GTGGTCTTGGCTACAATGGTGTCTGTTCCTCGG i micMur3.chr1 I 72 C 0 s proCoq1.NW_012133858v1 14798354 72 - 22200726 GTGGTTGTT-GGGGGCTTTG---------------------TT---GCAGTCTTTGCTGAGGTC-GTGGTGTTGGCTAAGGTGATGTTTGTTCCTTGG i proCoq1.NW_012133858v1 I 64 C 0 s otoGar3.GL873829 210591 72 + 608964 GTGGCTGTT-GGGAGCTTTT---------------------CC---GTGGTCTGTGCTGAGGTT-GTGGCCTTGGCTGAGGTGATGTTTGTTCTTTGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793236 72 + 98207768 GCAGATGTT-GTAGGATGCG---------------------TC---GGGGGCTTTGGTGAGGCT-GTGGTCTTGGTTAAGGTGATGTTTGGGTTTTTG i mm10.chr16 C 0 C 0 s canFam3.chr33 2325945 93 - 31377067 ATAGCTGTT-GGGGTCTTCCCTCCAGCCACGCTGGCTGTCTTC---AAGGTCTTTGCTAAGGCT-GTGGTCCTAAATAAGGTGATGTTTGCCTCTTGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2705978 75 - 6579706 AGGACTGTT-GGAGGCTTCC---------------------CTCTGGCAGTGCTGGCTGCCATC-AGGGTCTTTGCTGAGGTGATGTTTGTTCCTCGG i dasNov3.JH569502 C 0 C 0 a score=993069.000000 s hg38.chr3_KI270934v1_alt 68243 62 + 163458 CTGCTGTTGGTTGT-AGTCGGAG---------------------------------------GGACAGAAGGAAGAGGGTCCCTGCTGGTGGGGAAGGGC-CC s panTro5.chr3 2540331 60 - 202621043 CTGCTGTTGGTTGTCAGTCGGAG-----------------------------------------ACAGAAGGAAGAGGGTCCCTGCTGGT-GGGAAGGGC-CC i panTro5.chr3 T 94346 C 0 s panPan2.chrUn_NW_014024201v1 130306 62 - 190779 CTGCTGTTGGTTGT-AGTCGGAG---------------------------------------GGACAGAAGGAAGAGGGTCCCTGCTGGTGGGGAAGGGC-CC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81316 62 - 106623 CTGCTGTTGGTTGT-AGTCGGAG---------------------------------------GGACAGAAGGAAGAGGGTCCCTGCTGGTGGGGAAGGGC-CC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944862 101 - 123690457 CTGCTGCTGGTTGT-AGTCGGAGGGACAGAAGGAAGAGGGTCCCTGCTGGTTGTAGTCGGAGGGACAGAAGGAAGAGGGTCCCTGCTGGTGGGGAAGGGC-CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2353122 62 - 204787373 CTGCTGTTGGCTGT-AGTCGGAG---------------------------------------GGACAGAAGGAAGAGGGTCCCTGCTGGTGGGGAAGGGC-CC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418305 62 - 192460366 CTGCTGTTGGCTGT-AGTCGGAG---------------------------------------GGACAGAAGGAAGAGGGTCCCTGCTGGTGGGGAAGGGC-CC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157867 62 - 19675229 CTGCTGTTGGCTGT-AGTCGGAG---------------------------------------GGACAGAAGGAAGAAGGTCCCTGCTGGTGGGGAAGGGC-CC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395684 62 - 16847902 CTGCTGTTGGCTGT-AGTCGGAG---------------------------------------GGACAGAAGGAAGACGGTCCCTGCTGGTGGGGAAGGGC-CC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364620 62 + 91754291 CTGCTGTTGGCTGT-AGTCGGAG---------------------------------------GGACAGAAGGAAGAGGGTCCCTGCTGGTGGGGAAGGGC-CC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1433962 62 + 1977891 CTGCTGTTGGCTGT-AGTCGGAG---------------------------------------GGACAGAAGGAAGACGGTCCCTGCTGGTGGGGAAGGGC-CC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370417 62 - 7796314 CTGCTGTTGGCTGT-AGTCGGAG---------------------------------------GGACAGAAGGAAGAGGGTCCCTGCTGGTGGGGAAGGGC-CC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845712 63 + 74750902 CTGCTGCTGGCTGT-AGTCGGAT---------------------------------------GGATAGAAGGAAGAGGGTCCCTGCTGGTGGGGAAAGGCGCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17291476 62 - 17725628 CTGCTGCCGGCTGC-AGTCAGAG---------------------------------------GGACAGAAGGAAGAGGGTCTCTGCTGCCGGGGGAGGGC-CG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381656 62 + 6778120 CTGCTGCTGGCTGT-GGTCAGAT---------------------------------------GGACAGAAGGAAGAGGGTCCCTGCTGCCAGGGAAGGGC-CC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19193 62 + 69927 CTGCTGCCGGCTGT-GGTCGGAT---------------------------------------GGACAGAAGGAAGAGGGTCCCTGCTGGTGGGGAAGGGC-CC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88393043 62 + 114275543 CTGCCGTTGCCTGT-AGTCGGAG---------------------------------------GGACAGAAGGAAGAGGGCTCCTGCTGGCGGGGCGGGGC-CC i micMur3.chr1 C 0 I 286 s proCoq1.NW_012133858v1 14798426 62 - 22200726 CTGCCATTGCCTGT-AGTCGGAG---------------------------------------GGACAGAAGGAAGAGGGCTCCTACTGGTGGGGAAGGGC-CC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 210663 62 + 608964 CCACTGCTACCTGT-GGCAGGAT---------------------------------------ATATAGAAGGAAGAGGGCTCCTGCTGGTGGGAAGGGGC-CC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793308 62 + 98207768 CTGGTGCTAGCTGT-AGTTGAAT---------------------------------------AGATAGAAAAAGGAGGGTGGCTCTCTGTGAGGAAGGAG-CT i mm10.chr16 C 0 C 0 s canFam3.chr33 2326038 62 - 31377067 CTGCTGTTGGCCCT-GGTCAGCT---------------------------------------GGACAGAAGGAGCGGGGCTCCTGGTGATGGGGACAGAC-TC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706053 62 - 6579706 CTGCTGTTGGCTGT-AGTCAGAT---------------------------------------GGATAGAAGGAAGAGGGCTCCTGCTGATGGGGAGGCGT-AC i dasNov3.JH569502 C 0 C 0 a score=84052.000000 s hg38.chr3_KI270934v1_alt 68305 6 + 163458 CTTGGT s panTro5.chr3 2540391 6 - 202621043 CTTGGT i panTro5.chr3 C 0 I 94348 s panPan2.chrUn_NW_014024201v1 130368 6 - 190779 CTTGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81378 6 - 106623 CTTGGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944963 6 - 123690457 CTTGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2353184 6 - 204787373 CTTGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418367 6 - 192460366 CTTGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157929 6 - 19675229 CTTGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395746 6 - 16847902 CTTGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364682 6 + 91754291 CTTGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434024 6 + 1977891 CTTGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370479 6 - 7796314 TTTGGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845775 6 + 74750902 CTTGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17291538 6 - 17725628 CGTGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381718 6 + 6778120 CGTGGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19255 6 + 69927 CTTGGC i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14798488 6 - 22200726 ATTGGT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 210725 6 + 608964 ATTGGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793370 6 + 98207768 GTTGGT i mm10.chr16 C 0 C 0 s canFam3.chr33 2326100 6 - 31377067 ATTGGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706115 6 - 6579706 GTTGGT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88393105 286 + 114275543 I a score=475566.000000 s hg38.chr3_KI270934v1_alt 68311 41 + 163458 TGCGATGTCCATGGTCGGTGTCTCTGAAGGGGTGAAGTTCT s panTro5.chr3 2634745 39 - 202621043 TGCGATGTC-GTGGTCAGTGTCTCTGAAGGG-TGAAGTTCT i panTro5.chr3 I 94348 C 0 s panPan2.chrUn_NW_014024201v1 130374 41 - 190779 TGCGATGTCCGTGGTCAGTGTCTCTGAAGGGGTGAAGTTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81384 41 - 106623 TGTGCTGTCCATGGTCGGTGTCTCTGAAGGGGTGAAGTTCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2944969 41 - 123690457 CGTGATGCCCGTGGTGGGTGTCTCTGAAGGGGTGAAGTTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2353190 41 - 204787373 TGTGACGTCGGCAGTCGGTGTCTCTGAAGGGGTGAAGTTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418373 41 - 192460366 TGTGACGTCGGCAGTCGGTGTCTCTGAAGGGGTGAAGTTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157935 41 - 19675229 TGTGACGTCTGCAGTCGGTGTCTCTGAAGGGGTGAAGTTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395752 41 - 16847902 TGTGACGTCTGCAGTCAGTGTCTCTGAAGGGGTGAAGTTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364688 41 + 91754291 TGTGACGTCTGCAGTCGGTGTCTCTGAAGGGGTGAAGTTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434030 41 + 1977891 TGTGACGTCTGCAGTCGGTGTCTCTGAAGGGGTGAAGTTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370485 41 - 7796314 TGTGATGTCCGTGGTCGGTGTCTCTGAAGGGGTGAAGTTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73845781 38 + 74750902 TGTGAAGTCCATGGTG---GTCTCTGACGGGGTGAAGTTCT i calJac3.chr17 C 0 I 2871 s saiBol1.JH378146 17291544 38 - 17725628 TGTGAAGTCCGTGGTG---GCCTCTGAAGGGGTGAAGTTCT i saiBol1.JH378146 C 0 I 3 s cebCap1.NW_016107444v1 6381724 38 + 6778120 TGTGAAGTCCGCGGTG---GTCTCCGAAGGGGTGAGGTTCT i cebCap1.NW_016107444v1 C 0 I 3 s aotNan1.NW_018503669v1 19261 38 + 69927 TCTGAAGTCCGTGGTG---GTCTCCGAAGGGGTGAAGTTCT i aotNan1.NW_018503669v1 C 0 I 3 s proCoq1.NW_012133858v1 14798494 41 - 22200726 TGTACTGTCTGTGGCAGACGTCTCTGCCGGGGTAGACTTCT i proCoq1.NW_012133858v1 C 0 I 3 s otoGar3.GL873829 210731 41 + 608964 TGTACCATCTCCGGCAGGCGTCTCTGCAGGAGTGGAACTCT i otoGar3.GL873829 C 0 I 3 s mm10.chr16 32793376 41 + 98207768 TGTATTGCCTGTGGTTAAAGTCTCTGAGGTAGCAGAGCTCT i mm10.chr16 C 0 I 3 s canFam3.chr33 2326106 41 - 31377067 TGTGCCATCCGCGGTAGAAGGCTGTGAGGGGGTGGTGCTCT i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 2706121 41 - 6579706 TGTGCTGTCTGTGGTAAAAGGCTCTGGAGGGGTGGAGTTCT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88393105 286 + 114275543 I a score=2305096.000000 s hg38.chr3_KI270934v1_alt 68352 205 + 163458 ---TGAGGGCGGCTTCCGAGGG---GCTGTAGGAGGAAGCAGAGCTCCCAGCAAAGGAAGTTGTTTTGCCCACTGCTGACCCAGCCTCTATGGAGACCGGAGCTGCTCCTGAGACTTTGACGTAACTTGGTGTCTCAACA------------------------------------------------------------------------------------GAGAGGGCTGAGGTTTCTTCCAGGGGATTCCTGCTAACTGTGACCAGAGCTCCACTGAGGGTCGTGGCCCC s panTro5.chr3 2634784 196 - 202621043 ---TGAGGGCGGCTTC-GAGGG---GCTGTAGGAGGAAGCGGAGCTCCCAGCAAAGGAAGTTGTTTTGCCCACTGCTGACCCAGCCTCTATGGAG--CCGAGCTGCTCCTGAGACTTTCACGTAACTTGGTGTCTCAACA------------------------------------------------------------------------------------GAGAGGGCTGAGGTTTCTTCCAGGGGATTCC------CTGTGGCCAGAGCTCCACTGAGGGTCGTGGCCCT i panTro5.chr3 C 0 T 94302 s panPan2.chrUn_NW_014024201v1 130415 198 - 190779 ---TGAGGGCGGCTTCCGAGGG---GCTGTAGGAGGAAGCAGAGCTCCCAGCAAAGGAAGTTG-TTTGCCCACTGCTGACCCAGCCTCTATGGAGACCGGAGCTGCTCCTGAGACTTTCACGTAACTTGGTGTCTCAACA------------------------------------------------------------------------------------GAGAGGGCTGAGGTTTCTTCCAGGGGATTCC------CTGTGGCCAGAGCTCCACTGAGGGTCGTGGCCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81425 205 - 106623 ---TGAGGGTGGCTTCCGAGGG---GCTGTAGGAGGAAGCAGAGCTCCCAGCAAAGGAAGTTGTTTTGCCCACTGCTGACCCAGCCTCTATGGAGACCGGAGCTGCTCCTGAGACTTTCACGTAACTTGGTGTCTCAACA------------------------------------------------------------------------------------GAGAGGGCTGAGGTTTCTTCCAGGCGATTCCTGCTAACTGTGACCAGAGCTCCACTGAGGGTCGTGGCCCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945010 205 - 123690457 ---CGAGGGCGGCTTCCGAGGG---GCTGTAGAAGGAAGCAGAGCTCCCAGCAAAGGAAGTGCTTTTGTCCACTGCTGACCCAGCTTCTATGGAGACCGGGGCTGCTCCTGAGACTCTGACGTAACTTGGTGTCTCAACA------------------------------------------------------------------------------------GAGAGGGCTGAGGTTTCTTCCAGGGGATTCCCGCTAACTGTGGCCAGAGCTCCACTGAGGGTTGTGGCCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2353231 205 - 204787373 ---TGATGGTGGCTTTTGAGGG---GCTGTAGGAGGAAGCACAGCCCCCAGCAAAGGAAGCTGTTTTGCCCACTGTTGACCCGGCCTCTGTGGAGACGAGAGCTGCTCCTGAGACTTTGACGTAACTTGGTGTCTCCACA------------------------------------------------------------------------------------GAGAGGGCTGAGGTTTCTTCCAGGGGACTCCCGCTAACTGTGGCCAGAGTTCCACTGAGGGTCGTGGCCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418414 205 - 192460366 ---TGATGGTGGCTTTTGAGGG---GCTGTAGGAGGAAGCACAGCCCCCAGCAAAGGAAGCTGTTTTGCCCACTGTTGACCCGGCCTCTGTGGAGACGAGAGCTGCTCCTGAGACTTTGACGTAACTTGGTGTCTCCACA------------------------------------------------------------------------------------GAGAGGGCTGAGGTTTCTTCCAGGGGACTCCCGCTAACTGTGGCCAGAGTTCCACTGAGGGTCGTGGCCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19157976 205 - 19675229 ---TGATGGTGGCTTTTGAGGG---GCTGTAGGAGGAAGCACAGCCCCCAGCAAAGGAAGCTGTTTTGCCCACTGTTGACCCGGCCTCTGTGGAGACGAGAGCTGCTCCTGAGACTTTGACGTAACTTGGTGTCTCCACA------------------------------------------------------------------------------------GAGAGGGCTGAGGTTTCTTCCAGGGGATTCCCGCTAACTGTGGCCAGAGTTCCACTGAGGGTCGTGGCCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395793 205 - 16847902 ---TGATAATGGCTTTTGAGGG---GCTGCAGGAGGAAGCACAGCCCCCAGCAAAGGAAGCTGTTTTGCCCACTGCTGACCCGGCCTCTGTGGGGACGAGAGCTGCTTCTGAGACTCTGACGTAACTTGGTGTCTCCACA------------------------------------------------------------------------------------GAGAGGGCTGAGGTTTCTTCCAGGGGATTCCCACTACCTGTGGCCAGAGTTCCACGGAGGGTCGTGGCGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364729 205 + 91754291 ---TGATGGTGGTTTTTGAGGG---GCTGCAGGAGGAAGCAGAGCCCCCAGCAAAGGAAGCTGTTTTGCACACTGCTGACCCGGCCTCTGTGGGGACGAGAGCTGCTCCTGAGACTTTGACGCAACTTGGTGTCTCAACA------------------------------------------------------------------------------------GAGAGGGCTGAGGTTTCTTCCAGGGGATTCCCGCTACCTGTGGACAGAGTTCCACTGAGGGTCGTGGCCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434071 205 + 1977891 ---TGATAATGGCTTCTGAGGG---GCTGTAGGAGGAAGCACAGCCCCCAGCAAAGGAAGCTGTTTTGCCCACTGTTGACCCGGCCTCTGTGGAGACGAGAGCTGCTCCTGAGACTTTGACGCAACTTGGTGTCTCCACA------------------------------------------------------------------------------------GAGAGGGCTGAGGTTTCTTCCAGGGGATTCCCGCTACCTGTGGCCAGAGTTCCACGGAGGGTCGTGGCCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370526 289 - 7796314 ---TGATGGTGGCTTTTGAGGT---GCTGTAGGAGGAAGCAGAGCACCCAGCAAAGGAAGCTGTTCTGCCCACTGCTGACCCGGCCTCTGTGGAGACGAGAGCTGCTCCTGAGACGCTGACGTAACTTGGTGTCTCAACAGAGAGGGCTGAGGTCACTGCTGACCCGGCCTCTGTGGAGACGAGAGTTGCTCCTGAGACGCTGACGTAACTTGGCGTCTCAACTGAGAGGGCTGAGGTTTCTTCCAGGGGATTCCTGCTGACTGTGGCCAGAGTTCCACTGAGGGTCGTGGCCCT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17291585 205 - 17725628 ---TGGTGGCTGCTGCTGAGGG---GCTGTCGGCTGAAGCGGAGGCCCCAGCAAAGGATGTTGTTCTGTCCACGGCTGACCCGGCCTCTGTGGACGCCGAAGCTGCCCCGGAGACTCCGACATAACCAGGTGTCTCAGCA------------------------------------------------------------------------------------GAGAGGGCTGAGGGCTCTTCCAAGGGGCTCCCGCGGACGGTCGCCAGAGTCCCACCGAGCGTCGAGGCCCT i saiBol1.JH378146 I 3 C 0 s cebCap1.NW_016107444v1 6381765 205 + 6778120 ---GGGTGGCTGCTGCCAAGGG---GCTATGGGCTGAAGCAGGGGCCCCAGCAAAGGACATCGTTTTGTCCACTGCTGACCCGGCCTCTGTGGAAACCGAAGCTGCCCCGGAGCCTCTGACATAACTAGGTGTCTCAGCA------------------------------------------------------------------------------------GAGAGGGCTGAGGGCTCTTCCAAGGGGTTCCCGCTGACGGTCACCAGAGTCCCCCCGAGCGTCAAGGCCCT i cebCap1.NW_016107444v1 I 3 C 0 s aotNan1.NW_018503669v1 19302 205 + 69927 ---TGGTGGCTGCTTCCGAGGG---GCTGTAGGCTGAAGCGGAGGCCCCAGCAAAGGACGTCGTTTCGTCCACTGCTGACCCGGCCCCTGTGGAAACCGAAGCTGCCCTGGAGACTCTGACGTAACTGGGCGTCTCAGCA------------------------------------------------------------------------------------GAGAGGGCTGAGGGCTCTTCCAACGGGTTCCCGCTGACTGTCGCCAGAGTCCCACTGAGCGTCAAGGCCCT i aotNan1.NW_018503669v1 I 3 C 0 s proCoq1.NW_012133858v1 14798538 202 - 22200726 ---TGGTGGCTACTTCTGAGGG---GCTGTAGACTGCAGCTGAGGACCCTGCAGAGGAAGTCACTTTGTCCACTGTTGACCCAGCCTCTGT---GACTGTGACTGCTCCCGAGACTTCGATGTAGCTTGGTGTCTCCTCA------------------------------------------------------------------------------------GAGAAGGCCGAGGTTTCTCCCGAGGGGTCCATGCTGACTGTCACTGAAGTTCCACTAAAGGTAGTGCCCTT i proCoq1.NW_012133858v1 I 3 C 0 s otoGar3.GL873829 210775 205 + 608964 ---TGGTGGCTACCTCTGATGG---GCTGTAGACTGAAGCTGAGGACCCAGAAGAGGAAGTGACTTTGCCCGCCGTTGACCCAGCTTCTGTGGGGACTGTGACTGCTTCTGAGACTTCGATGTGGCTTGGTGTCTCCACA------------------------------------------------------------------------------------GAGAGGGCTGAGGTTTCTCCCCAGGGGTCCATGCTACCTGTCACCAAAGTTCCAGTGAAGGAAGTGGCTTT i otoGar3.GL873829 I 3 C 0 s mm10.chr16 32793420 208 + 98207768 ---TGGTGACCACCACTGAGAGACTGCTGCTGTCGAGAGCCGTGAAACTCACGAAGGAGGCTGCTTCTCCCATTGTTGATCCAGCAACCATGGGGACTGTGATGGTGCCCAAGACCTCAGTGTGGCTTTGTGTCTCAATA------------------------------------------------------------------------------------GAGAGTGTTGAAGTGTTTTCCAGGGGGTTCCTTCTAACTGTCACCGAAGTTCCAACAGAGGTAAGAGTCTG i mm10.chr16 I 3 C 0 s canFam3.chr33 2326150 205 - 31377067 ---TAGTGGCGATGTGGCTGTA---GCTGTGGGCCATAGTTGAGAGCCCAGCAGGTGAAGTCGCTTTCCCCACTGTTAACCCAGCCTCTGTGGAGACTGTCACTGCTCCCAAGACCTTGGTGTGGCTTGTCGTCTCAATA------------------------------------------------------------------------------------GAGAGGACTGAAGCTTCTTCCAAGGGGTTCACGCTGACTGAGACCAAAGTTGTGCTGGGGGTGGTGGTCGT i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 2706162 208 - 6579706 TGATGGTGGCTACTTCTGAGGG---GCCATAGACTGTAGCTGAGAACCCAGCTGAGGAAATAGCTTTGCCTATTGTTGATCCAGCCTCTGTGGAGACTGGATCTGCTCCTGTGACCTTGGCACGGTTTGCTGCCTCAACA------------------------------------------------------------------------------------GAGAGAGCTGAGGATTCTTCCAAGGGATGCAGGCTAATCATCATGAAACTCCCATTGGAGGTGGTAGCCTT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88393105 286 + 114275543 I e calJac3.chr17 73845819 2871 + 74750902 I a score=289093.000000 s hg38.chr3_KI270934v1_alt 68557 22 + 163458 GGGTGCTGTCACTTCTCTTTCT s panTro5.chr3 2540678 22 - 202621043 GGGTGCTGTCACTTCTCTTTCT i panTro5.chr3 T 94302 I 94302 s panPan2.chrUn_NW_014024201v1 130613 22 - 190779 GGGTGCTGTCACTTCTCTTTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81630 22 - 106623 GGGTGCTGTCACTTCTCTTTCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945215 22 - 123690457 GGGTGCTGTCACTTCTCTTTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2353436 22 - 204787373 GGGTGCTGTCACTTCTCTTTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418619 22 - 192460366 GGGTGCTGTCACTTCTCTTTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158181 22 - 19675229 GGGTGCTGTCACTTCTCTTTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16395998 22 - 16847902 GGGTGCTGTCACTTCTCTTTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364934 22 + 91754291 GGGTGCTGTCACTTCTCTTTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434276 22 + 1977891 AGGTGCTGTCACTTCTCTTTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370815 22 - 7796314 GGGTGCTGTCACTTCTCTTTCT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17291790 22 - 17725628 GGGTGCCGTCACGTCTCCTTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381970 22 + 6778120 GGGTGCCGTCACTTCTCTTTCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19507 22 + 69927 GGCTGTCGTCACTTCTCTTTCT i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14798740 22 - 22200726 GCCTGCTGTTGTTTCTGTCTCT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 210980 22 + 608964 GTCTACTGTTGTTTCTCTTTCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793628 22 + 98207768 GGCCACTGCTGTTTCGCTTTCT i mm10.chr16 C 0 I 3 s canFam3.chr33 2326355 22 - 31377067 AGCTGCTGTTGCTTCTCCTTCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706370 19 - 6579706 ---GGCTGTTGTTTCCTTTTCT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88393105 286 + 114275543 I e calJac3.chr17 73845819 2871 + 74750902 I a score=115705.000000 s hg38.chr3_KI270934v1_alt 68579 12 + 163458 GTGGCGCT-GTTA s panTro5.chr3 2635002 13 - 202621043 ATGGTGCTTGTTG i panTro5.chr3 I 94302 C 0 s panPan2.chrUn_NW_014024201v1 130635 12 - 190779 ATGGTGCT-GTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81652 12 - 106623 GTGGCGCT-GTTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945237 12 - 123690457 GTGGCACT-GTTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2353458 12 - 204787373 GTGGCGCT-GTTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418641 12 - 192460366 GTGGCGCT-GTTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158203 12 - 19675229 GTGGCGCT-GTTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396020 12 - 16847902 GTGGCGCT-GTTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364956 12 + 91754291 GTGGCGCT-GTTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434298 12 + 1977891 GTGGTGCT-GTTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370837 12 - 7796314 GTGGTGCT-GTTG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17291812 12 - 17725628 GCGGAACT-GTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6381992 12 + 6778120 GCGGCACT-GCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19529 12 + 69927 GTGGCACT-GTTG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14798762 12 - 22200726 GTGGTGCT-ACTC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 211002 12 + 608964 GTGGTGCC-ACTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793653 9 + 98207768 ATTGCACT-A--- i mm10.chr16 I 3 C 0 s canFam3.chr33 2326377 12 - 31377067 GTAGGGCT-ATTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706389 12 - 6579706 GTGGACCT-ACTG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88393105 286 + 114275543 I e calJac3.chr17 73845819 2871 + 74750902 I a score=196134.000000 s hg38.chr3_KI270934v1_alt 68591 14 + 163458 GTGGGGAGTGGGGT s panTro5.chr3 2635015 13 - 202621043 GTGGG-AGTGGGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130647 13 - 190779 GTGGG-AGTGGGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81664 14 - 106623 GTGGGGAGTGGGTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945249 14 - 123690457 GTGGGGAGTGGGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2353470 14 - 204787373 GTGGGGAGTGGGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418653 14 - 192460366 GTGGGGAGTGGGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158215 14 - 19675229 GTGGGGAGTGGGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396032 14 - 16847902 GTGGGGAGTGGGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364968 14 + 91754291 GTGGGGAGTGGGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434310 14 + 1977891 GTGGGGAGTGGGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370849 14 - 7796314 GTGGGGAGTGGGGT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17291824 14 - 17725628 GTGGGGAGTGGGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382004 14 + 6778120 GTGGGGAGTAGGGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19541 14 + 69927 GTGGGGAGTAGGGT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88393391 14 + 114275543 GTGGGGGGCGGGGT i micMur3.chr1 I 286 C 0 s proCoq1.NW_012133858v1 14798774 14 - 22200726 GTGGGGGGTGGGGT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 211014 14 + 608964 GTGGGAGGTGGGGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793662 14 + 98207768 GTGGAGACTGTCCC i mm10.chr16 C 0 C 0 s canFam3.chr33 2326389 14 - 31377067 GCAGTTAGTGGGGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706401 14 - 6579706 GTAGTGAGTAGGGT i dasNov3.JH569502 C 0 C 0 e calJac3.chr17 73845819 2871 + 74750902 I a score=975335.000000 s hg38.chr3_KI270934v1_alt 68605 63 + 163458 CCCAACCGTGGCATGAGGTGCAGCTGACTCTGTGGTGCCGGCTGTGGACAGGGTCTCGGCAGA s panTro5.chr3 2635028 60 - 202621043 CC-AActgtgg-atcaggtgtggctgactctgtggtgccggctgtg-acagggtcttggcaga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130660 62 - 190779 CC-AACCGTGGCATCAGGtgaggctgactctgtggtgccggctgtggacagggtcttggcaga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81678 60 - 106623 CC---CCGTGGTATCAGGTGCAGCTGACTCTGTGGTGCCGGCTGTGGACAGGGTCTCGGCAGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945263 63 - 123690457 CCCAACCGTGGCATCAGGTGCAGCTGACTCTGCGGTGCCGGCTGTGGACAGGGTCTCGGGAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2353484 63 - 204787373 CCCAACCGTGGCATCAGGTGCGGTTGACTCTGTGGTGCCGGCTGTGGACAGGGTCTCGGCAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418667 63 - 192460366 CCCAACCGTGGCATCAGGTGCGGTTAACTCTGTGGTGCCGGCTGTGGACAGGGTCTCGGCAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158229 63 - 19675229 CCCAACCGTGGCATCAGGTGCGGTTGACTCTGTGGTGCTGGCTGTGGACAGGGTCTCGGCAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396046 63 - 16847902 CCCAACCGTGGCATCAGGTGCGGTTGACTCTGTGGTGCCGGCTGTGGACAGGGTCTCGGCAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91364982 63 + 91754291 CCCAACCGTGGCATCAGGTGCGGTTGACTCTGTGGTGCCGGCTGTGGACAGGGTCTCGGCAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434324 63 + 1977891 CCCAACCGTGGCATCAGGTGCGGTTGACTCTGTGGTGCCGGCTGTGGACAGGGTCTCGGCAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370863 63 - 7796314 CCCAACCGTGGCATCAGGTGCGGTTGACTCTGTGGCGCCGGCTGTGGACAGGGTCTCGGCAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73848690 63 + 74750902 CTTAACTGTGGCATCAGGTGTGGCTGACTCTGTGGCGCTGGCTGTTGACGGGGTCTCAGCGGA i calJac3.chr17 I 2871 C 0 s saiBol1.JH378146 17291838 63 - 17725628 CTTCACTGTGGCATCAGGTGTGGCTGACTCTGTGGCGCTGGCTGTTGACGGGGTCTCAGCAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382018 63 + 6778120 CTTAACTGTGGCATCAGGTGTGGCTGACTCTGTGGCGCCAGCTGTTGACGGGGTCTCAGCAGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19555 63 + 69927 CTTAACTGTGGCATCAGGTGTGGCTGACTCTGTGGCGCCAGCTGTTGATGGGGTCTCAGCAGA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88393405 63 + 114275543 CTCAATGGTGGCATCAGGTGCGGCCGACTCTGTGGCGCTGGCTGTTGACAAGGTCCCCGCAGA i micMur3.chr1 C 0 I 255 s proCoq1.NW_012133858v1 14798788 63 - 22200726 CTCAATGGTGGCATCAGGTGCGGCTGACTCTGTGGCACCGGACGTTGGCAAGGTCTCAGCAGA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 211028 63 + 608964 CCCAACAGTGGCATCAGGTGCAGCTGACTCTGTGGCACTGGCTGCTGACAAGGTCTCGGCAGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793676 54 + 98207768 CTCAAGGGTGGTGGCAAGGG---------CCGGGGTGCCAGCAGTTGACAGGATCCCAGATAA i mm10.chr16 C 0 C 0 s canFam3.chr33 2326403 63 - 31377067 CTCAACTGTGGTATCAGGTGTGGCTGCCTCTGTGGCACTGGCTGCTGACAAGGTCTCCGCGGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706415 60 - 6579706 CTGAATTGTGGTATCAGGCGTGGCTGATTCTGTAGTGCTGGCTGTT---AAGGTCTCAACAGA i dasNov3.JH569502 C 0 C 0 a score=115822.000000 s hg38.chr3_KI270934v1_alt 68668 8 + 163458 GGCTGTGA s panTro5.chr3 2635088 8 - 202621043 ggctgtgg i panTro5.chr3 C 0 T 94280 s panPan2.chrUn_NW_014024201v1 130722 8 - 190779 ggctgtgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81738 8 - 106623 GGCTGTGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945326 8 - 123690457 GGCTGTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2353547 8 - 204787373 GGCTGTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418730 8 - 192460366 GGCTGTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158292 8 - 19675229 GGCTGTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396109 8 - 16847902 GGCTGTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365045 8 + 91754291 GGCTGTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434387 8 + 1977891 GGCTGTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370926 8 - 7796314 GGCTGTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73848753 8 + 74750902 GGCCGTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17291901 8 - 17725628 GGCCGTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382081 8 + 6778120 GGCCGTGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19618 8 + 69927 GGCCGTGG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14798851 8 - 22200726 GGTTGTGG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 211091 8 + 608964 GGTTGTAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793730 8 + 98207768 GCTTGTGG i mm10.chr16 C 0 C 0 s canFam3.chr33 2326466 8 - 31377067 TGGTGTGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706475 8 - 6579706 AGGTGTCA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88393468 255 + 114275543 I a score=1052282.000000 s hg38.chr3_KI270934v1_alt 68676 84 + 163458 CCTCAGTGATGTGTGGTTTTGCTTCAG--TGGAGTCAGGCAGAGCTGGTG-GATCGGAG-GTGGACGAGGCCTTCACCCC-TTCCGTGG s panTro5.chr3 2540816 89 - 202621043 CCTCAGTGATGTGTGGTTTTGCATCAGTTTGGAGTCAGGCAGAGCTGGTGCGATCGGAGTGTGGACGAGGCCTTCACCCCGTTCCGTGG i panTro5.chr3 T 94280 I 94275 s panPan2.chrUn_NW_014024201v1 130730 83 - 190779 cCTCAGTGATGTGTGGTTTTGCATCAG--TGGAGTCAGGCAGAGCTGGTG-GATTGGAG-GTGGACGAGGCCTTCACCC--TTCCGTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81746 84 - 106623 CCTCAGTGATGTGTGGTTTTGCATCAG--TGGAGTCAGGCAGAGCTGGTG-GATCAGAG-GTGGACGAGGCCTTCACCCC-TTCCGTGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945334 84 - 123690457 CCTCCGTGACGTGTGGTTTTGCGTCAG--TGGAGTCAGGCAGAGCTGGTG-GATGGGAG-GTGGGCGAGGCCTTCACCCC-TTCCGTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2353555 84 - 204787373 CCTCGGTGCTGTGTGGTTTTGCATCAG--TGGAGTCAGGCAGAGCTGGTG-GATTGGAG-GTGGGCGAGGCCTTCATCCC-TTCCGTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418738 84 - 192460366 CCTCAGTGCTGTGTGGTTTTGCATCAG--TGGAGTCAGGCAGAGCTGGTG-GATTGGAG-GTGGGCGAGGCCTTCATCCC-TTCCGTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158300 84 - 19675229 CCTCGGTGCTGTGTGGTTTTGCATCAG--TGGAGTCAGGCAGAGCTGGTG-GATTGGAG-GTGGGCGAGGCCTTCATCCC-TTCCGTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396117 84 - 16847902 CCTCGGTGCTGTGTGGTTTTGCATCAG--TGGAGTCAGGCAGAGCTGGTG-GACTGGAG-GTGGGCGAGGCCTTCATCCC-TTCCGTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365053 84 + 91754291 CCTCGGTGCTGTGTGGTTTTGCCTCAG--TGGAGTCAGGCAGAGCTGGTG-GATTGGAG-GTGGGCGAGGCCTTCATCCC-TTCCGTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434395 84 + 1977891 CCTCGGTGCTGTGTGGTTTTGCATCAG--TGGAGTCAAGCAGAGCTGGTG-GACTGGAG-GTGGGCGAGGCCTTCATCCC-TTCCGTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7370934 84 - 7796314 CCTCGGTGCTGTGTGGTTTTGCATCCG--TGGAGTCAGGCAGAGCTGGTG-GATTGGAG-GTGGGCGAGGCCTTCACGCC-TTCCGTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73848761 84 + 74750902 CCTCCGTGACGTGTGGTTCTGTGGCAG--TGGAGTCGGGCAGAGCTGGTG-GATGCAAG-GTGGGCGAGTCCTTCACTGC-TGCTGTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17291909 84 - 17725628 CCTCCGTGACGTGTGGTTCTGTGGCAG--TGGAGTCGGGCAGAGCTGGCA-GATGGGAG-GTGGGCGAGGCCTTCACTGC-TGCTGTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382089 84 + 6778120 CCTCCGTGAGGTGTGGTTCTGTGGCAG--TGGAGTCGGGCAGAGCTGGTA-GATGGGAG-GTGGGCGAGGCCCTCACTGC-TCCTGTGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19626 84 + 69927 CCTCCGTGACGTGTGGTTCTGCGGCAG--TGGAGTCGGGCAGAGCTGGTA-GATGGGAG-GTGGGCGAGGCCTTCACCGC-TGCTGTGG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14798859 81 - 22200726 ACTTGGTGACGTACGATTTGACATCAG--AGGGGTCTGGCAAAGCTGACG-TATCAGAG-GTGGACGAGGCCTT---CAC-TCCTGTGG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 211099 84 + 608964 ACATGGTGATGTATGATTTCACCTCAG--TGGAGTCTAGCAAAGCTGATA-TAGCAGAG-GGGGACAAGGCCTTAACCCC-TTCTGGGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793738 84 + 98207768 TCTCGGGGAAAATTGGTTTTGCCTCAG--TGGGTGGAGGCAAAGTTAATA-TCTCAGAA-GTGAACAAAGCTGCCGTCGC-TTCTGTAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2326474 81 - 31377067 TCTCGGTGATGTGTGATTCTGCTTCAG--TGGAATTGAGCAAAGCTGACA-CCACAGGG-GGAGATAGGACCT---CTCC-CCCTGTGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706483 84 - 6579706 TCTCAGTGATGTGTGATTTGGCTTCAG--TGGAGTCTGATGAAACTAAGG-CCTCAGGG-GTAGACAGGTCCTCCAGTCC-TTTTATGG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88393468 255 + 114275543 I a score=418357.000000 s hg38.chr3_KI270934v1_alt 68760 29 + 163458 GGATGAGATCTATGTCTGAGGCCCCAGGG s panTro5.chr3 2635180 27 - 202621043 GGATGAG-TATGTGTCTGAGGCCC-AGGG i panTro5.chr3 I 94275 C 0 s panPan2.chrUn_NW_014024201v1 130813 29 - 190779 GGATGAGATCTGTGTCTGAGGCCCCAGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81830 27 - 106623 GGATGTGATC--TGTCTGAGGCCCCAGGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945418 29 - 123690457 GGATGTGATCTGTGTCTGAGGCCCCAGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2353639 29 - 204787373 GGATGTGATCTGTGTCTGAGGCCCCAGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418822 29 - 192460366 GGATGTGATCTGTGTCTGAGGCCCCAGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158384 29 - 19675229 GGATGTGATCTGTGTCTGAGGCCCCAGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396201 29 - 16847902 GGGCGTGATCTGTGTCTGAGGCCCCAGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365137 29 + 91754291 GGATGTGATCTGTGTCTGAGGCCCCAGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434479 29 + 1977891 GGATGTGATCTGTGTCTGAGGCCCCAGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371018 29 - 7796314 GGCTGTGATCTGTGTCTGGGGCCCCAGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73848845 29 + 74750902 AGATGTGGTCTGTGTCTCGGGCCCCAGCG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17291993 29 - 17725628 GGCTGTGGTCTATGTCTGAGGCCCTGGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382173 29 + 6778120 GGACGTGGTCTGTGTCTGAGGCCCCAGGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19710 29 + 69927 GGATGTGGTCTGTGTCTGAGGCCCCAGGG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14798940 29 - 22200726 GGCTGTGATCTGTGTCCGAGGCCCCGGGG i proCoq1.NW_012133858v1 C 0 I 122 s otoGar3.GL873829 211183 29 + 608964 GGCTGTGACCTGTGTCTAAGGTCCCAGAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793822 29 + 98207768 GGCTGAGGCTCGCGCCTGGGGCCCCAGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2326555 29 - 31377067 GGTTGAGATCCATGTCCAAGGTCCCAAGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706567 29 - 6579706 GGCTGTGAGTTGTGTCTGAGGTCCCAGGG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88393468 255 + 114275543 I a score=763735.000000 s hg38.chr3_KI270934v1_alt 68789 62 + 163458 ATGCTGGAAGTTGTTGTTTCTATTTCTGTGATGCTGCAATTAATAACCTCGATGTTTGTGAC------ s panTro5.chr3 2635207 62 - 202621043 ATGCTGGAAGTCATTGTTTCTATTTCTGTGATGCTGCAATTGATAACCTCAATGTGGGTGAC------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130842 62 - 190779 ATGCTGGAAGTCGTTGTTTCTATTTCTGTGATGCTGCAATTGATAACCTCAATGTGGGTGAC------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81857 62 - 106623 ATGCTGGAAGTCGTTGTTTCTATTTCTGTGATGCTGCAATTGATAACCTCAATGTGAGTGAC------ i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945447 62 - 123690457 ATGCTGGAAGTCGTTGTTTCTATTTCTGTGATGCTGCAATTGATAACCTCGATGTGGGTGAC------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2353668 62 - 204787373 ATGCTGGAAGTCGTTGTTTCTGTTTCTGTGATGCTGCAATTGATAACCTCGATGTGGGTGAC------ i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418851 62 - 192460366 ATGCTGGAAGTCGTTGTTTCTGTTTCTGTGATGCTGCAATTGATAACCTCAATGTGGGTGAC------ i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158413 62 - 19675229 ATGCTGGAAGTCGTTGTTTCTGTTTCTGTGATGCTGCAATTGATAACATCGATGTGGGTGAC------ i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396230 62 - 16847902 ATGCTGGAAGTCGTTGTTTCTGTTTCTGTGATGCTGCAATTGATAACCTCGATGTAGGTGAC------ i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365166 62 + 91754291 ATGCTGGAAGTCGTCGTTTCTGTTTCTGTGATGCTGCAATTGATAACCTCGATGTGGGTGAC------ i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434508 62 + 1977891 ATGCTGAAAGTCCCTGTTTCTGTTTCTGTGATGCTGCAATTGATAACCTCGATGGGGGTGAC------ i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371047 62 - 7796314 ATGCTGGAAGTCGTTGTTTCTATTTCTGTGATGCTGGAATTGATAACCTCGACGGGGGTGAC------ i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73848874 62 + 74750902 ATGATGGAAGTGGCTGTTTCTATTTCTGGGATGCTGCAGTTGATAACCTCCATGTGGGTGAC------ i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17292022 62 - 17725628 ATGATGGCAGTGGCTGTTTCTATTTCCACGATGCTGCAGTTGACAACCTCCACGTGGGTGAC------ i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382202 62 + 6778120 ATGATGGAAGTGGCTGTTTCTATTTCTGTGATGCTGCAGTTGATAACCTCCATGTGGGTGAC------ i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19739 62 + 69927 ATGATGGGAGTGGCTGTTTCTATTTCTGTGATGCTGCAGTCGATGACCTCCGTGTGGGTGAC------ i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 211212 59 + 608964 ---ATGGTGTCTGTTGTTTCTATTTCTGTAACAGTGCAGTTGGTAACCTCGATGTGGGTGAT------ i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793851 56 + 98207768 ---ATGGTGATGGTTGTTTCTATTTCTGTGA---TGCAGTTGCTGAGTTTAATATGAGTGAT------ i mm10.chr16 C 0 C 0 s canFam3.chr33 2326584 59 - 31377067 ---GTGGTGGCAGTTGTTTCTATTTCTAGAATGCTGCAGTTGGCAACCTCAATGTCAGTGAT------ i canFam3.chr33 C 0 I 47 s dasNov3.JH569502 2706596 59 - 6579706 ---CTGATAGTGGTC------ATTTCTGTAATGTTGCAATTGGTAACTTCCATGTTGGCTATGATGTA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14798969 122 - 22200726 I e micMur3.chr1 88393468 255 + 114275543 I a score=364235.000000 s hg38.chr3_KI270934v1_alt 68851 42 + 163458 AGT------CACCAGGGCTTCAGCGAGGAGAGTGACATCAGATCCCGG s panTro5.chr3 2635269 42 - 202621043 AGT------CACCAGGGCTTCAGCGAGGAGAGTGACATCAGATCCCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130904 42 - 190779 AGT------CACCAGGGCTTCAGCGAGGAGAGTGACATCAGATCCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81919 42 - 106623 AGT------CACCAGGGCTTCAGCAAGGAGAGTGACATCAGATCCCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945509 42 - 123690457 GGT------CACCAGGGCTTCAGCGAGCAGAGTGACGTCAGATCCCGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2353730 42 - 204787373 GGT------CACCAGGGCTTCAGTGAGGAGAGCGACGTCAGATCCCGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418913 42 - 192460366 GGT------CACCAGGGCTTCAGTGAGGAGAGCGACGTCAGATCCCGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158475 42 - 19675229 GGT------CACCAGGGCTTCAGTGAGGAGAGCGACGTCAGATCCCGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396292 42 - 16847902 GGT------CACCAGGGCTTCAGTGAGGAGAGCGACGTCAGATCCCGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365228 42 + 91754291 GGT------CACCATGGCTTCAGTGAGGAGAGTGACGTCAGATCCCGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434570 42 + 1977891 GGT------CACCAGGGCTTCAGCGAGGAGAGCGACGTCAGATCCCAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371109 42 - 7796314 GGT------CACCAGGGCTTCAGCGAGGAGAGTGACGCCAGATCCCGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73848936 42 + 74750902 AGC------CACCAGCGCTTCGGTGAGGACAGTGACGTCAGATGCGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17292084 42 - 17725628 GGT------CACCAGCGCTTCGGTGAGGACAGTGACGTCAGATGCCCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382264 42 + 6778120 GGT------CACCAGCGCTTCAGTGAGGACAGTGACGTCAGATGCCCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19801 42 + 69927 GGT------CACCAGCGCTTCGGTGAGGACTGTGACGTCGGATGCCGG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 211271 33 + 608964 AGTGTAGGCAACCAAGCCTTTAG---------------CTGGTCCCAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793907 8 + 98207768 GTT------GA--------------AGG-------------------- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2706655 37 - 6579706 GGC------AACCAAAGCTTTAGCTGGAGCAATGATCTCAAGT----- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14798969 122 - 22200726 I e micMur3.chr1 88393468 255 + 114275543 I e canFam3.chr33 2326643 47 - 31377067 I a score=369477.000000 s hg38.chr3_KI270934v1_alt 68893 46 + 163458 GGACCATGACGGGGTGATGACTGGATGGGGGCCGTCGGAAGAGGCG s panTro5.chr3 2635311 46 - 202621043 GGACCATGAGGGGGTGATGACTGGATGGGGGCCATCGGAAGAGGCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130946 46 - 190779 GGACCATGAGGGGGTGATGACTGGATGGGGGCCGTCAGAAGAGGCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 81961 46 - 106623 GGACCATGATGGGGTGATGACTGGATGGGGGCCGTCGGAAGAGGCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945551 46 - 123690457 GGACCATGAGGGGGTGATGACCGGATGGGGGCCGTCGGAAGAGGCG i nomLeu3.chr11 C 0 T 50 s rheMac8.chr2 2353772 46 - 204787373 GGACCATGAGGGGGTGATGGCTGGATGGGGGCCGTCGGAAGAGGCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192418955 46 - 192460366 GGACCATGAGGGGGTGATGGCTGGATGGGGGCCGTCGGAAGAGGCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158517 46 - 19675229 GGACCATGAGGGGGTGATGGCTGGATGGGGGCCGTCGGAAGAGGCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396334 46 - 16847902 GGACCATGAGGGGGTGATGGCTGGATGGGGGCCGTCGGAAGAGGCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365270 46 + 91754291 GGACCATGAGGGGGTGATGGCTGGATGGGGGCCGTCGGAAGAGGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434612 46 + 1977891 GGACCATGACGGGGTGATGGCTGGATGGGGGCCGTCGGAAGAGGCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371151 46 - 7796314 GGACCGTGAGGGGGTGATGGCTGGAGGGGGGCTGTCGGAAGAGGCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73848978 46 + 74750902 GGTCCATGAGGTGGTGATGGCTGGCCGGGAGCCGTGGGAAGAAGCG i calJac3.chr17 C 0 T 48 s cebCap1.NW_016107444v1 6382306 46 + 6778120 GGTCCATGAGGTGGTGGTGACCGGCTGGGAGCTGTGGGAAGAGGCG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19843 46 + 69927 GGTCCATGAGGTGGTGATGACTGGCTGGGAGCGGTGGGACGAGGCG i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32793915 6 + 98207768 CAACCA---------------------------------------- i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14798969 122 - 22200726 I e micMur3.chr1 88393468 255 + 114275543 I e dasNov3.JH569502 2706692 0 - 6579706 C e saiBol1.JH378146 17292126 0 - 17725628 C e canFam3.chr33 2326643 47 - 31377067 I e otoGar3.GL873829 211304 0 + 608964 C a score=27814.000000 s hg38.chr3_KI270934v1_alt 68939 7 + 163458 CTGCTCT s panTro5.chr3 2635357 7 - 202621043 CCGCTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130992 7 - 190779 CCGCTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82007 7 - 106623 CCGCTCT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2353818 7 - 204787373 CTGCTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419001 7 - 192460366 CTGCTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158563 7 - 19675229 CTGCTGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396380 7 - 16847902 CTGCTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365316 7 + 91754291 CTGCTGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434658 7 + 1977891 CTGCTGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371197 7 - 7796314 CTGCTGT i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14798969 122 - 22200726 I e mm10.chr16 32793921 0 + 98207768 C e aotNan1.NW_018503669v1 19889 0 + 69927 C e micMur3.chr1 88393468 255 + 114275543 I e dasNov3.JH569502 2706692 0 - 6579706 C e saiBol1.JH378146 17292126 0 - 17725628 C e calJac3.chr17 73849024 48 + 74750902 T e cebCap1.NW_016107444v1 6382352 0 + 6778120 C e canFam3.chr33 2326643 47 - 31377067 I e otoGar3.GL873829 211304 0 + 608964 C e nomLeu3.chr11 2945597 50 - 123690457 T a score=11264.000000 s hg38.chr3_KI270934v1_alt 68946 2 + 163458 CT s panTro5.chr3 2635364 2 - 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130999 2 - 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82014 2 - 106623 CT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945547 2 - 123690457 CC i nomLeu3.chr11 T 50 C 0 s rheMac8.chr2 2353825 2 - 204787373 CT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419008 2 - 192460366 CT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158570 2 - 19675229 CT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396387 2 - 16847902 CT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365323 2 + 91754291 CT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434665 2 + 1977891 CT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371204 2 - 7796314 CT i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14798969 122 - 22200726 I e mm10.chr16 32793921 0 + 98207768 C e aotNan1.NW_018503669v1 19889 0 + 69927 C e micMur3.chr1 88393468 255 + 114275543 I e dasNov3.JH569502 2706692 0 - 6579706 C e saiBol1.JH378146 17292126 0 - 17725628 C e calJac3.chr17 73849024 48 + 74750902 T e cebCap1.NW_016107444v1 6382352 0 + 6778120 C e canFam3.chr33 2326643 47 - 31377067 I e otoGar3.GL873829 211304 0 + 608964 C a score=30682.000000 s hg38.chr3_KI270934v1_alt 68948 5 + 163458 GAGGC s panTro5.chr3 2635366 5 - 202621043 GAGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131001 5 - 190779 GAGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82016 5 - 106623 GAGGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945549 5 - 123690457 GGGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2353827 5 - 204787373 GAGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419010 5 - 192460366 GAGGC i macFas5.chr2 C 0 T 57 s macNem1.NW_012014355v1 19158572 5 - 19675229 GAGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396389 5 - 16847902 GAGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365325 5 + 91754291 GAGGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434667 5 + 1977891 GAGGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371206 5 - 7796314 GAGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73848976 5 + 74750902 GGGGT i calJac3.chr17 T 48 C 0 s mm10.chr16 32793921 2 + 98207768 ---AC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2706692 2 - 6579706 ---GT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14798969 122 - 22200726 I e aotNan1.NW_018503669v1 19889 0 + 69927 C e micMur3.chr1 88393468 255 + 114275543 I e saiBol1.JH378146 17292126 0 - 17725628 C e cebCap1.NW_016107444v1 6382352 0 + 6778120 C e canFam3.chr33 2326643 47 - 31377067 I e otoGar3.GL873829 211304 0 + 608964 C a score=30984.000000 s hg38.chr3_KI270934v1_alt 68953 24 + 163458 CCGTGACGGGGTGATGACTGGATG s panTro5.chr3 2635371 24 - 202621043 CCGTGACGGGGTAATGACTGGATG i panTro5.chr3 C 0 T 94265 s panPan2.chrUn_NW_014024201v1 131006 24 - 190779 CCGTGACGGGGTGATGACTGGATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82021 24 - 106623 CCGTGACGGGGTGATGACTGGATG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945554 24 - 123690457 CCATGAGGGGGTGATGACCGGATG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192418958 24 - 192460366 CCATGAGGGGGTGATGGCTGGATG i macFas5.chr2 T 57 C 0 s calJac3.chr17 73848981 24 + 74750902 CCATGAGGTGGTGATGGCTGGCCG i calJac3.chr17 C 0 C 0 s mm10.chr16 32793923 14 + 98207768 CCCT----------TGGCTGGAGT i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2706694 3 - 6579706 CCG--------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14798969 122 - 22200726 I e aotNan1.NW_018503669v1 19889 0 + 69927 C e micMur3.chr1 88393468 255 + 114275543 I e macNem1.NW_012014355v1 19158577 0 - 19675229 C e saiBol1.JH378146 17292126 0 - 17725628 C e cebCap1.NW_016107444v1 6382352 0 + 6778120 C e canFam3.chr33 2326643 47 - 31377067 I e otoGar3.GL873829 211304 0 + 608964 C e colAng1.NW_012118932v1 7371211 0 - 7796314 C e manLeu1.NW_012102020v1 1434672 0 + 1977891 C e chlSab2.chr15 91365330 0 + 91754291 C e cerAty1.NW_012004056v1 16396394 0 - 16847902 C e rheMac8.chr2 2353832 0 - 204787373 C a score=9887.000000 s hg38.chr3_KI270934v1_alt 68977 5 + 163458 GGGGC s panTro5.chr3 2541130 5 - 202621043 GGGGC i panTro5.chr3 T 94265 C 0 s panPan2.chrUn_NW_014024201v1 131030 5 - 190779 GGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82045 5 - 106623 GGGGC i gorGor5.CYUI01000576v1 C 0 T 29 s nomLeu3.chr11 2945578 5 - 123690457 GGGGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192418982 5 - 192460366 GGGGC i macFas5.chr2 C 0 C 0 s calJac3.chr17 73849005 5 + 74750902 GGAGC i calJac3.chr17 C 0 C 0 s mm10.chr16 32793937 3 + 98207768 --TGC i mm10.chr16 C 0 I 2 e proCoq1.NW_012133858v1 14798969 122 - 22200726 I e aotNan1.NW_018503669v1 19889 0 + 69927 C e micMur3.chr1 88393468 255 + 114275543 I e dasNov3.JH569502 2706697 0 - 6579706 C e macNem1.NW_012014355v1 19158577 0 - 19675229 C e saiBol1.JH378146 17292126 0 - 17725628 C e cebCap1.NW_016107444v1 6382352 0 + 6778120 C e canFam3.chr33 2326643 47 - 31377067 I e otoGar3.GL873829 211304 0 + 608964 C e colAng1.NW_012118932v1 7371211 0 - 7796314 C e manLeu1.NW_012102020v1 1434672 0 + 1977891 C e chlSab2.chr15 91365330 0 + 91754291 C e cerAty1.NW_012004056v1 16396394 0 - 16847902 C e rheMac8.chr2 2353832 0 - 204787373 C a score=25603.000000 s hg38.chr3_KI270934v1_alt 68982 23 + 163458 CGTCGGAAGAGGCGCTGCTCTCT s panTro5.chr3 2541135 23 - 202621043 CGTCGGAAGAGGCGCCGCTTTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131035 23 - 190779 CTTCGGAAGAGGCGCCGCTCTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2945583 23 - 123690457 CGTCGGAAGAGGCGCCGCTCTCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192418987 23 - 192460366 CGTCGGAAGAGGCGCTGCTGTCT i macFas5.chr2 C 0 C 0 s calJac3.chr17 73849010 23 + 74750902 CGTGGGAAGAAGCGCTGCTCCCT i calJac3.chr17 C 0 C 0 s mm10.chr16 32793942 12 + 98207768 TGTCGGG-----------TCCCA i mm10.chr16 I 2 C 0 e proCoq1.NW_012133858v1 14798969 122 - 22200726 I e aotNan1.NW_018503669v1 19889 0 + 69927 C e micMur3.chr1 88393468 255 + 114275543 I e dasNov3.JH569502 2706697 0 - 6579706 C e macNem1.NW_012014355v1 19158577 0 - 19675229 C e saiBol1.JH378146 17292126 0 - 17725628 C e cebCap1.NW_016107444v1 6382352 0 + 6778120 C e canFam3.chr33 2326643 47 - 31377067 I e otoGar3.GL873829 211304 0 + 608964 C e colAng1.NW_012118932v1 7371211 0 - 7796314 C e manLeu1.NW_012102020v1 1434672 0 + 1977891 C e chlSab2.chr15 91365330 0 + 91754291 C e cerAty1.NW_012004056v1 16396394 0 - 16847902 C e rheMac8.chr2 2353832 0 - 204787373 C e gorGor5.CYUI01000576v1 82050 29 - 106623 T a score=-995.000000 s hg38.chr3_KI270934v1_alt 69005 2 + 163458 GA s panTro5.chr3 2541158 2 - 202621043 GA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131058 2 - 190779 GA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2945606 2 - 123690457 GA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192419010 2 - 192460366 GA i macFas5.chr2 C 0 C 0 s calJac3.chr17 73849033 2 + 74750902 GA i calJac3.chr17 C 0 C 0 s mm10.chr16 32793954 1 + 98207768 G- i mm10.chr16 C 0 C 0 s canFam3.chr33 2326690 1 - 31377067 G- i canFam3.chr33 I 47 C 0 e proCoq1.NW_012133858v1 14798969 122 - 22200726 I e aotNan1.NW_018503669v1 19889 0 + 69927 C e micMur3.chr1 88393468 255 + 114275543 I e dasNov3.JH569502 2706697 0 - 6579706 C e macNem1.NW_012014355v1 19158577 0 - 19675229 C e saiBol1.JH378146 17292126 0 - 17725628 C e cebCap1.NW_016107444v1 6382352 0 + 6778120 C e otoGar3.GL873829 211304 0 + 608964 C e colAng1.NW_012118932v1 7371211 0 - 7796314 C e manLeu1.NW_012102020v1 1434672 0 + 1977891 C e chlSab2.chr15 91365330 0 + 91754291 C e cerAty1.NW_012004056v1 16396394 0 - 16847902 C e rheMac8.chr2 2353832 0 - 204787373 C e gorGor5.CYUI01000576v1 82050 29 - 106623 T a score=9690.000000 s hg38.chr3_KI270934v1_alt 69007 2 + 163458 GG s panTro5.chr3 2541160 2 - 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131060 2 - 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2945608 2 - 123690457 GG i nomLeu3.chr11 C 0 T 13 s macFas5.chr2 192419012 2 - 192460366 GG i macFas5.chr2 C 0 C 0 s calJac3.chr17 73849035 2 + 74750902 GG i calJac3.chr17 C 0 T 13 s saiBol1.JH378146 17292126 2 - 17725628 GG i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 211304 2 + 608964 GG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793955 2 + 98207768 GA i mm10.chr16 C 0 C 0 s canFam3.chr33 2326691 2 - 31377067 GG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706697 2 - 6579706 GG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14798969 122 - 22200726 I e aotNan1.NW_018503669v1 19889 0 + 69927 C e micMur3.chr1 88393468 255 + 114275543 I e macNem1.NW_012014355v1 19158577 0 - 19675229 C e cebCap1.NW_016107444v1 6382352 0 + 6778120 C e colAng1.NW_012118932v1 7371211 0 - 7796314 C e manLeu1.NW_012102020v1 1434672 0 + 1977891 C e chlSab2.chr15 91365330 0 + 91754291 C e cerAty1.NW_012004056v1 16396394 0 - 16847902 C e rheMac8.chr2 2353832 0 - 204787373 C e gorGor5.CYUI01000576v1 82050 29 - 106623 T a score=5043.000000 s hg38.chr3_KI270934v1_alt 69009 2 + 163458 CC s panTro5.chr3 2541162 2 - 202621043 CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131062 2 - 190779 CC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82021 2 - 106623 CC i gorGor5.CYUI01000576v1 T 29 C 0 s macFas5.chr2 192419014 2 - 192460366 CC i macFas5.chr2 C 0 T 1 s saiBol1.JH378146 17292128 2 - 17725628 TC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 211306 2 + 608964 CT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793957 2 + 98207768 CT i mm10.chr16 C 0 C 0 s canFam3.chr33 2326693 2 - 31377067 CC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706699 2 - 6579706 CT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14798969 122 - 22200726 I e aotNan1.NW_018503669v1 19889 0 + 69927 C e micMur3.chr1 88393468 255 + 114275543 I e macNem1.NW_012014355v1 19158577 0 - 19675229 C e calJac3.chr17 73849037 13 + 74750902 T e cebCap1.NW_016107444v1 6382352 0 + 6778120 C e colAng1.NW_012118932v1 7371211 0 - 7796314 C e manLeu1.NW_012102020v1 1434672 0 + 1977891 C e chlSab2.chr15 91365330 0 + 91754291 C e cerAty1.NW_012004056v1 16396394 0 - 16847902 C e rheMac8.chr2 2353832 0 - 204787373 C e nomLeu3.chr11 2945610 13 - 123690457 T a score=10773.000000 s hg38.chr3_KI270934v1_alt 69011 8 + 163458 CGTGACGG s panTro5.chr3 2541164 7 - 202621043 -GTGACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131064 7 - 190779 -ATGAGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82023 7 - 106623 -GTGACGG i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 17292130 8 - 17725628 TGTGAGGT i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 211308 8 + 608964 TGTGAGGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793959 8 + 98207768 CGTGAGCT i mm10.chr16 C 0 C 0 s canFam3.chr33 2326695 8 - 31377067 CGTGGGGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706701 8 - 6579706 CGTGAGGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14798969 122 - 22200726 I e aotNan1.NW_018503669v1 19889 0 + 69927 C e micMur3.chr1 88393468 255 + 114275543 I e macNem1.NW_012014355v1 19158577 0 - 19675229 C e calJac3.chr17 73849037 13 + 74750902 T e cebCap1.NW_016107444v1 6382352 0 + 6778120 C e colAng1.NW_012118932v1 7371211 0 - 7796314 C e manLeu1.NW_012102020v1 1434672 0 + 1977891 C e chlSab2.chr15 91365330 0 + 91754291 C e cerAty1.NW_012004056v1 16396394 0 - 16847902 C e macFas5.chr2 192419016 1 - 192460366 T e rheMac8.chr2 2353832 0 - 204787373 C e nomLeu3.chr11 2945610 13 - 123690457 T a score=34910.000000 s hg38.chr3_KI270934v1_alt 69019 20 + 163458 GGTGATGACTGGATGGGGGC s panTro5.chr3 2541171 20 - 202621043 GGTGATGACTGGGATGGGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131071 20 - 190779 GGTGATGACTGGATGGGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82030 20 - 106623 GGTGATGACTGGATGGGGGC i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 17292138 20 - 17725628 GGTAATGACTGGCGGGAAGC i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 14799091 20 - 22200726 GGTGATGACTGGAACTGAGC i proCoq1.NW_012133858v1 I 122 C 0 s otoGar3.GL873829 211316 20 + 608964 GGAGAGCATTGGACCCAAGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793967 20 + 98207768 GCTGAGGACCCCAGCTGAAC i mm10.chr16 C 0 C 0 s canFam3.chr33 2326703 20 - 31377067 GGTGATGGCCAGAACTGAGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706709 20 - 6579706 GGCAATGGCTGGAACTGGGA i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 19889 0 + 69927 C e micMur3.chr1 88393468 255 + 114275543 I e macNem1.NW_012014355v1 19158577 0 - 19675229 C e calJac3.chr17 73849037 13 + 74750902 T e cebCap1.NW_016107444v1 6382352 0 + 6778120 C e colAng1.NW_012118932v1 7371211 0 - 7796314 C e manLeu1.NW_012102020v1 1434672 0 + 1977891 C e chlSab2.chr15 91365330 0 + 91754291 C e cerAty1.NW_012004056v1 16396394 0 - 16847902 C e macFas5.chr2 192419016 1 - 192460366 T e rheMac8.chr2 2353832 0 - 204787373 C e nomLeu3.chr11 2945610 13 - 123690457 T a score=890.000000 s hg38.chr3_KI270934v1_alt 69039 1 + 163458 C s panTro5.chr3 2541191 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131091 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 17292158 1 - 17725628 C i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 14799111 1 - 22200726 T i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 211336 1 + 608964 T i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793987 1 + 98207768 T i mm10.chr16 C 0 C 0 s canFam3.chr33 2326723 1 - 31377067 T i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706729 1 - 6579706 T i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 19889 0 + 69927 C e micMur3.chr1 88393468 255 + 114275543 I e macNem1.NW_012014355v1 19158577 0 - 19675229 C e calJac3.chr17 73849037 13 + 74750902 T e cebCap1.NW_016107444v1 6382352 0 + 6778120 C e colAng1.NW_012118932v1 7371211 0 - 7796314 C e manLeu1.NW_012102020v1 1434672 0 + 1977891 C e chlSab2.chr15 91365330 0 + 91754291 C e cerAty1.NW_012004056v1 16396394 0 - 16847902 C e macFas5.chr2 192419016 1 - 192460366 T e rheMac8.chr2 2353832 0 - 204787373 C e nomLeu3.chr11 2945610 13 - 123690457 T e gorGor5.CYUI01000576v1 82050 0 - 106623 C a score=4500.000000 s hg38.chr3_KI270934v1_alt 69040 1 + 163458 G s panTro5.chr3 2541192 1 - 202621043 G i panTro5.chr3 C 0 I 1 s panPan2.chrUn_NW_014024201v1 131092 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 17292159 1 - 17725628 G i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 88393723 1 + 114275543 G i micMur3.chr1 I 255 C 0 s proCoq1.NW_012133858v1 14799112 1 - 22200726 G i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 211337 1 + 608964 G i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793988 1 + 98207768 G i mm10.chr16 C 0 C 0 s canFam3.chr33 2326724 1 - 31377067 G i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706730 1 - 6579706 G i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 19889 0 + 69927 C e macNem1.NW_012014355v1 19158577 0 - 19675229 C e calJac3.chr17 73849037 13 + 74750902 T e cebCap1.NW_016107444v1 6382352 0 + 6778120 C e colAng1.NW_012118932v1 7371211 0 - 7796314 C e manLeu1.NW_012102020v1 1434672 0 + 1977891 C e chlSab2.chr15 91365330 0 + 91754291 C e cerAty1.NW_012004056v1 16396394 0 - 16847902 C e macFas5.chr2 192419016 1 - 192460366 T e rheMac8.chr2 2353832 0 - 204787373 C e nomLeu3.chr11 2945610 13 - 123690457 T e gorGor5.CYUI01000576v1 82050 0 - 106623 C a score=40419.000000 s hg38.chr3_KI270934v1_alt 69041 12 + 163458 TCGGAAGAGGCA s panTro5.chr3 2541194 12 - 202621043 TCGGAAGAGGCG i panTro5.chr3 I 1 C 0 s panPan2.chrUn_NW_014024201v1 131093 12 - 190779 TCGGAAGAGGCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82050 12 - 106623 TCGGAAGAGGCG i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 17292160 12 - 17725628 TGGGAAGAGGCT i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 88393724 12 + 114275543 TCGGAGGAGGAG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14799113 12 - 22200726 TCGGAGGAGGAG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 211338 12 + 608964 TCGAAGGAGGAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32793989 12 + 98207768 TCAGAGGAAGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2326725 12 - 31377067 TCGGAGAAGGCG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706731 12 - 6579706 TCAGGGGAGGCA i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 19889 0 + 69927 C e macNem1.NW_012014355v1 19158577 0 - 19675229 C e calJac3.chr17 73849037 13 + 74750902 T e cebCap1.NW_016107444v1 6382352 0 + 6778120 C e colAng1.NW_012118932v1 7371211 0 - 7796314 C e manLeu1.NW_012102020v1 1434672 0 + 1977891 C e chlSab2.chr15 91365330 0 + 91754291 C e cerAty1.NW_012004056v1 16396394 0 - 16847902 C e macFas5.chr2 192419016 1 - 192460366 T e rheMac8.chr2 2353832 0 - 204787373 C e nomLeu3.chr11 2945610 13 - 123690457 T a score=106855.000000 s hg38.chr3_KI270934v1_alt 69053 14 + 163458 CTGCTCTCTGAGGA s panTro5.chr3 2541206 14 - 202621043 CTGCTCTCTGAGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131105 14 - 190779 CTGCTCTCTGAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82062 14 - 106623 CTGCTCTCTGAGGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945597 14 - 123690457 CCGCTCTCTGAGGA i nomLeu3.chr11 T 13 C 0 s calJac3.chr17 73849024 14 + 74750902 CTGCTCCCTGAGGA i calJac3.chr17 T 13 C 0 s saiBol1.JH378146 17292172 14 - 17725628 CTGCTCCCCGAGGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382352 14 + 6778120 CTGCTCCCTGACGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19889 14 + 69927 CTGCTCCCTGAGGA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88393736 14 + 114275543 CCGCTCTCTGAGGA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14799125 14 - 22200726 CTGCTCTCTGAGGA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 211350 14 + 608964 CTGCTCTCTGAGGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32794001 14 + 98207768 CTGCTCTCTGAAGA i mm10.chr16 C 0 C 0 s canFam3.chr33 2326737 14 - 31377067 CTGCTCTTTAAGGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706743 14 - 6579706 CTTCCCTCCAAGGC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19158577 0 - 19675229 C e colAng1.NW_012118932v1 7371211 0 - 7796314 C e manLeu1.NW_012102020v1 1434672 0 + 1977891 C e chlSab2.chr15 91365330 0 + 91754291 C e cerAty1.NW_012004056v1 16396394 0 - 16847902 C e macFas5.chr2 192419016 1 - 192460366 T e rheMac8.chr2 2353832 0 - 204787373 C a score=3212563.000000 s hg38.chr3_KI270934v1_alt 69067 236 + 163458 CAGGCCCTTAGCTTCTG--TGGAGGTGTG----AGCCAATGTCAAT---------ATGTCCA-TTGTGAGTGTCTTTGCCTCTTCAGA-GC-TGTCATCGGTGCAAAGGGTGTCAAA-GATGGC-TTCCTCGGGATCACTGCCTGTGATGGTC-TGAACTGTGGT----CATT-CCAGCTCCCTCGGGGCTGCCACTGGCGGCTGATGTCTCCACGGAGGT--GGCGATCAGCACCATGAAGTTGGGAGATG---TTTTTGTGAAAC s panTro5.chr3 2541220 244 - 202621043 ACAGCCCTTAGCTTCTTGTTGGAGGTCTGTGATAGCCAATGTCAAT---------CTGTCCAATGGTGAG-GTCTTTGCCTCTTCAGAAGCATGTCATCGGT-CAAACG-TGTCAAAAGATGGCATTCCTCGG-ATCACTGCGTGTGATGGTCGTGAACTGTGGTGGGTCATTTCCAGCTC--TCGCGGCTGCCACTGGCGG--GA-GTCTCCACAGAGTTTTGGTGATCAGCACCACGAAGTTGGGAGATG----TTTTGTGAAA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131119 236 - 190779 CAGGCCCTTAGCTTCTG--TGGAGGTGTG----AGCCAATGTCAAT---------ATGTCCA-TTGTGAGTGTCTTTGCCTCTTCAGA-GC-TGTCATCGGTGCAAACGGTGTCAAA-GATGGC-TTCCTCGGGATCACTGCCTGTGATGGTC-TGAACTGTGGT----CATT-CCAGCTCCCTCGGGGCTGCCACTGGCGGCTGATGTCTCCACAGAGGT--GGTGATCAGCACCACGAAGTTGGGAGATG---TTTTTGTGAAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82076 236 - 106623 CAGGCCCTTAGCTTCTG--TGGAGGTGTG----AGCCAATGTCAAT---------ATGTCCA-CTGTGAGTGTCTTTGCCTCTTCAGA-GC-TGTCATTGGTGCAAAGGGTGTCAAA-GATGGC-TTTCTCGGGATCACTGCCTGCGATGGTC-TGAACTGTGCT----CATT-CCAGCTCCCTCGGGGCTGCCACTGGCGGCTGATGTCTCCACGGAGGT--GGCGATCAGCACCATGAAGTTGGGAGATG---TTTTTGTGAAAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945611 236 - 123690457 CAGGCCCTTAGCTTCTT--TGGAGGTGTG----AGCCAATGTCAAT---------ATGTCCA-TTGCGAGTGTCTTTGCCTCTTCAGA-GC-TGTCATCGGTGCAAAGGGTGTCAAA-GATGGC-TTCCTCGGGATCACTGCCTGTGACGGTC-TGAACTGTGGT----CATT-CCGCCTCTCTCGGGGCTTCCACTGGCGGCTGATGTGTCCACAGAGGT--GGCAATCAGCACCATGAAGTCGGGAGGTG---TTTTTGTGAAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2353832 236 - 204787373 CAGGCCCTTAGCTTCTG--TGGAGGTGTG----AGCCAATGTCAAT---------ATGTCCG-TTGTGCGTGTCTTTGCCTCTTCAGA-GC-TATCATCGGTGCGAAGGGTGTCAAA-GACGGC-TTCCTTGGGATCACTGCCTGTGACGGTC-TCAGCTGTGGT----CATT-CCAGGTCCCTCGGGGTTGCCAGTGGCGGCGGATGTCTCCACAGAGGT--GGTGATCAGCACCGTGCGGTCGGGAGGTG---TTTCTGTGGAAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419015 236 - 192460366 CAGGCCCTTAGCTTCTG--TGGAGGTGTG----AGCCAATGTCAAT---------ATGTCCG-TTGTGCGTGTCTTTGCCTCTTCAGA-GC-TATCATCGGTGCGAAGGGTGTCAAA-GACGGC-TTCCTTGGGATCACTGCCTGTGACGGTC-TCAGCTGTGGT----CATT-CCAGGTCCCTCGGGGCTGCCAGTGGCGGCGGATGTCTCCGCAGAGGT--GGCGATCAGCACCGTGCGGTCGGGAGGTG---TTTCTGTGGAAG i macFas5.chr2 T 1 C 0 s macNem1.NW_012014355v1 19158577 236 - 19675229 CAGGCCCTTAGCTTCTG--TGGAGGTGTG----AGCCAATGTCAAT---------ATGTCCG-TTGTGCGTGTCTTTGCCTCTTCAGA-GC-TATCATCGGTGCGAAGGGTGTCAAA-GACGGC-TTCCTTGGGATCACTGCCTGTGATGGTC-TCAGCTGTGGT----CATT-CCAGGTCCCTCGGGGCTGCCAGTGGCGGCGGATGTCTCCGCAGAGGT--GGCGATCAGCACCGTGCGGTCGGGAGGTG---TTTCTGTGGAAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396394 236 - 16847902 CAGGCCCTTAGCTTCTG--TGGAGGTGTG----AGCCGATGTCGAT---------ATGTCCG-TTGTGCGTGTCTTTGCCTCTTCAGA-GC-TATCATCGGTGCGAAGGGTGTCAAA-GACGGC-TTCCTTGGGATCACTGCCTGTGACGGTC-TCAGCTGTGGT----CATT-CCAGGTCCCTCGGGGCGGCCAGTGGCGGCGGATGTCTCCGCAGAGGT--GGCGATCAGCACTGTGCGGTCGGGAGGTG---TTTCTGTGGAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365330 236 + 91754291 CAGGCCCTTAGCTTCTG--TGGAGGTGTG----AGCCAATGTCAAT---------ATGTCCA-TTGTGCGTGTCTTTGCCTCTTCAGA-GC-TATCATCGGTGCGAAGGGTGTCAAA-GACGGC-TTCCTTGGGATCACTGCCTGTGACGGTC-TCAGCTGTGGT----CATT-CCAGGTCCCTCGGGGCTGCCAGTGGCGGCGGATGTCCCCGCAGAGGT--GGCGATCAGCACCGTGCGGTCGGGAGGTG---TTTCTGTGGAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434672 236 + 1977891 CAGGCCCTTAGCTTCTG--TGGAGGTGTG----AGCCGATGTCGAT---------ATGTCCG-TTGTGCGTGTCTTTGCCTCTTCAGA-GC-TATCATCGGTGTGAAGGGTGTCAAA-GACGGC-TTCCTTGGGATCACTGCCTGTGACGGTC-TCAGCTGTGGT----CATT-CCAGGTCCCTCGGGGCGGCCAGTGGCGGCAGATGTCTCCGCAGAGGT--GGCGATCAGCACCGTGCGGTCGGGAGGTG---TTTCTGTGGAAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371211 245 - 7796314 CAGGCCCTTAGCTTCTG--TGGAGGTGTG----AGCCAATGTCGATTGGCTCTTCAGAGCTA-TCATCGGTGTCTTTGCCTCTTCAGA-GC-TATCATCGGTGCGAAGGGTGTCAGA-GACGGC-TTCCTCGGGATCGCTGCCTGTGACGGGC-TCCATTGTGGT----CGTT-CCAGGTCCCTCGGGGCCGCCAGTGGCGGCTGATGTCCCCGCAGAGGT--GGCAATCAGCACCGTGCAGTTGGGAGGTG---TTTCTGTGGACG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849038 239 + 74750902 CAGGCCCTCCGCTTCTG--CGGAGCCGTG----AGCCAGCGGCAAC---------AGGGCAA-CAGTGAGTGTCTTTGCCTCTTCAGA-GC-TGTCATCGGTGCACAGGGTGTCAAA-GACGAT-GTCCTCAGGATCACGGCCTGTGACGGTC-TCAAGGGTGGT----CGTT-CCAGCTCCCTCGGGGCTGCCCCTGGTGACTGACGTCTCCAGGGAGGT--GGCGATGACCACCACGAAGTCGGGAGGTACGATTTTTGTGACGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17292186 236 - 17725628 CCGGCCCTCTGCTTCCG--TGGAGGTGCG----AGCCAGCGGCAAC---------AGGGCAC-CAGTGAGTGTCTCTGCCTCTTCAGA-GC-TG---TGGGTGCAGAGGGTGTCAAA-GACGGG-GTCCTCAGGGTCACCGCCTGTGACGGTC-TCAAGGGTGGT----CGTT-CCAGCTCCTGCGGGGCTGCCGCTGGTGACTGATGTCCCCATGGAGGT--GGCGATCACCACCACGACGTCGGGAGGTATGATTTTTGTGACGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382366 239 + 6778120 CAGGCCCTCAGCGTCTG--CGGAGGCGCG----AGCCAGTGGCAAC---------AGGGCAA-CAGTGAGTGTCTTTGCTTCTTCAGA-GC-TGTCGTCGGTGCAAAGGGTGTCAAA-CACGGG-GTCCTCGGGATCACCACCTGTGACGGTC-TCAAGGGTGGT----TGTC-CCAGCCCCCTCGGGGCTGCCGCTGGTGACTGATGTCTCCATGGAGGT--GGCGATCACCACCACCACGTCGGGAGGTATGATTTTTGTGACGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 19903 239 + 69927 CAGGCCCTCAGCTTCTG--TGGAGGTGTG----AGCCGGCGGCAAC---------AGGGCAA-CAGTGAGTGTCTTTGCCTCTTCAGA-GC-TGTCATAGATGCAAAGGGTGTCAAA-GACGGT-GTCCTCAGGATCACTGCCTGTGACGGTC-TCACGGCTGGT----CGCT-CCGGCTCCCTCAGGGCTGCTGCTGGTGACCGACGTCTCCATGGAGGT--GGCGATCACCACCACGAAGTCGGGAGGTGTGATTTTTGTGATGA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88393750 239 + 114275543 CAGGCCCTGAGCTTCTC--TGGAGGTGTG----AGCGGATGTCAAG---------ACGTCCG-CTGTGACCCTCTTTGCCTCTTCAGA-GC-TGTCATCGGTACAAAGGGTGTGAAA-GATGGC-GTCTGCAGGATCACTGCCTGTGACAGTC-TCAGCTGTGGT----CATC-CCAGTTCCCGTGGGGCTGCCACTTAAGACTGATGTCTCCACACAGGT--GGAGATCACGACCATGAACTTGGAAGTTGTTCTTTTTGTGAGGC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14799139 239 - 22200726 CAGGCCCTCAGCTTCCC--TGGAGCTGTG----GGCCGATGTCAAA---------ACATCAG-TTGTGACCCTCTTTGCCTCTTCAGA-GC-TGTCATCGGTACAAAGGGTGTGAAA-GATGGT-GTCCACAGGATCACTGCCTGTGACAGTC-TCAACTGTGGT----CATT-CCAGTTCCCGTGGGGCTGCCACTTGAGGCTGATGTCTCCATACAGGC--GGTGATCACAACCATGAACTTGGGAGGTATTATTTTTGTGAGGG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 211364 239 + 608964 TAAGCCCTCAACTTCTC--TGGAAGTGTG----AGCCAATGTCAAG---------ATGTTAA-CGGTGACCCTCTTTGCCTCTTCAGA-GC-TGTCATTGGTACAAAGGGTGTCAAA-GATGGT-TTCCACAGGGTCACTGCCTGTGACACTC-TGAACTGTGGT----TATC-CCAGTTCCCTCAGGGCTGCCACTTGTGGCTGACATCTCCATAGGGGC--AGTGATCGCAACCATGAACTTGGAAGGAGTTATTTTTGTGATGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32794015 233 + 98207768 CAGGTACTCCACTTCCG--TGGAGGTGTG----TGCCAACGTCAGG---------AGGTCAA-CTGTGATCTTCCTTGCCTCTTCAGA-GC-TGTCATCGGTACAAAGGGTGTCAAA-GACGGC-TTCTATGGAGTCCCACACTGTGCCAGTT-TGGACAGTGCT----CATC-CCAGTTC---TGGGGCTGTTGCTTGGTGCCAATGTCTCTGTAGGGAT--GGTGTGCATAACCGTGAGGTCAGAAGGTA---TTCTTATTGAAA i mm10.chr16 C 0 I 435 s canFam3.chr33 2326751 239 - 31377067 CAGGCCTTCAGCTTCCA--CAGAAGTGTG----AGCCAATGTCAAG---------ACGTCAA-TTGTGATCCTCTTTGCCTCTTCCGA-AC-TGTCATCAGTACAAAGGGCATCGAA-GACAGA-TTTTGCAAGATCACTGCCTGTAACAGTC-TCAACTGTGGT----CATC-CCAGTTCCCACGGGGTTGCCACTGGTGGCCGATGCCTCCATAGGAGT--GGTGATCACCACCGTGAACTTGGAAGGTGTCATTTTGGTGAAGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706757 239 - 6579706 CAGGGCTTCAGCTTCTG--TGGAGGTGTG----AGTCAAGGTCAAG---------ACATCAA-TTTTGATCATCTGGGCCTGTTCAGA-GC-TGCCCTCAGTACAGAGGGCATCAAA-GATGAC-TTTTGTGAGATCACTATCTGTAACAGTC-TCAAACATGGA----TGTC-TCAGTTACTGCTGTGCTGACACTTGTTGCTGATGTCTCCATAGGGGT--GGAGGTTGCAACCATGAACTTGGAAGGTATTGTTTTTGTGAGGG i dasNov3.JH569502 C 0 C 0 a score=38977.000000 s hg38.chr3_KI270934v1_alt 69303 19 + 163458 TCCT---------------GGT-CTCTCTTGCAGG s panTro5.chr3 2541464 20 - 202621043 TCCT---------------GGTCCTCTCTTGCAGG i panTro5.chr3 C 0 I 94423 s panPan2.chrUn_NW_014024201v1 131355 19 - 190779 TCCT---------------GGT-CTCTCTTGCAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82312 19 - 106623 TCCT---------------GGT-CTCTCTTGCAGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945847 19 - 123690457 TCCT---------------GGT-CTCTCTTGCAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354068 4 - 204787373 TCCT------------------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419251 4 - 192460366 TCCT------------------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158813 4 - 19675229 TCCT------------------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396630 4 - 16847902 TCCT------------------------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365566 4 + 91754291 TTCT------------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434908 4 + 1977891 TCCT------------------------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371456 19 - 7796314 TCCTGGTCTCTGTTGCAGG---------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849277 19 + 74750902 TCCT---------------GGT-CTCTGTTGCAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17292422 19 - 17725628 TCCT---------------GGT-CTCTGTTGCAGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382605 19 + 6778120 TCCT---------------GGT-CCCTGTTGCAGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 20142 19 + 69927 TCCT---------------GGT-CTCTGTCGCAGG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88393989 19 + 114275543 TCCT---------------GGT-CTCTGTGGCAGG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14799378 19 - 22200726 TCCT---------------GGT-CTCTGTTGCAGG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 211603 19 + 608964 TCCT---------------GGT-CTCTGTTGTAGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32794683 19 + 98207768 TCCT---------------GGT-CTTTGTTACAAA i mm10.chr16 I 435 C 0 s canFam3.chr33 2326990 19 - 31377067 CCCT---------------GCC-TTCCATTGCAGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2706996 19 - 6579706 CTCT---------------GGT-CTCCATTGCAGG i dasNov3.JH569502 C 0 C 0 a score=492043.000000 s hg38.chr3_KI270934v1_alt 69322 47 + 163458 GGAAATTCTCTTGGCTCCCCTGGTCTCTGCTTCTGGAATGGGGCCGG s panTro5.chr3 2635907 47 - 202621043 GGAAATTCTCTTGGCTCCCCTGGTCTCTGCTTCTGGAATGGGGCCGG i panTro5.chr3 I 94423 T 94422 s panPan2.chrUn_NW_014024201v1 131374 47 - 190779 GGAAATTCTCTTGGCTCCCCTGGTCTCTGCTTCTGGAATGGGGCCGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82331 47 - 106623 GGAAATTCTCTTGGCTCCCCTGGTCTCTGCTTCTGGAATGGGGCCGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945866 47 - 123690457 GGAAATCCCCTTGGCTCCCCTGGGCTCTGCTTCTGGAATGGGGCCGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354072 26 - 204787373 ---------------------GGTCTCTGCTTCTGGAATGGGGCCGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419255 26 - 192460366 ---------------------GGTCTCTGCTTCTGGAATGGGGCCGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158817 26 - 19675229 ---------------------GGTCTCTGCTTCTGGAATGGGGCCGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396634 26 - 16847902 ---------------------GGTCTCTGCTTCTGGAATGGGGCCGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365570 26 + 91754291 ---------------------GGTCTCTGCTTCTGGAATGGGGCCGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434912 26 + 1977891 ---------------------GGTCTCTGCTTCTGGAATGGGGCCGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371475 47 - 7796314 GGAGATGCTCTCGGTTCCCCGGGTCTCTGCCTCTGGAGTGGGGCCGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849296 47 + 74750902 GGAAATGGTCTCGATTCCCCTGGTCTCTGCTACCGGAATGGGGCCGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17292441 47 - 17725628 GGAAATGGTCTTGATTGCCCTGGTCTCTGCTACTGGAATGGGGCCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382624 47 + 6778120 CGAAATGGTCTTGATTCCCCTGGTCTCTGCTACTGGAATGGGGCTGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 20161 47 + 69927 GGAAGTGGTCTTGATTCCCCTGGTGTCTGCTACTGGAATGGGACTGG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88394008 47 + 114275543 GGAAACAGTCCCGGCTTCCCTGGTCTCTGCTTCTGGAACGGTGCTGG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14799397 47 - 22200726 GGAAACAGTCTCGGTTTCCCTGGTCTCTTCTTCGAGAATGGTGCTGG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 211622 47 + 608964 GGAAACAGTCTTGATTTCCCTGGTCCCTGCTTCTGGAATGATGCTGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32794702 47 + 98207768 AGAGGTGGTCTGAGTGTCTCTGGAATTGACCTCTGAACTGATACTAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2327009 47 - 31377067 AAAAGTGGTTTTGGTGTCCCTGGTCTCTGCTTCTGAATTGCTGTTGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2707015 47 - 6579706 GGAAATGGGCTTGGTTTTCATGGTCTCTGCTTCTGAAACAGTGCTGC i dasNov3.JH569502 C 0 C 0 a score=617714.000000 s hg38.chr3_KI270934v1_alt 69369 47 + 163458 CTGGGGTTGAGGCCCTAGAAGAGGTCTCAGCGCTCAGCGTTTGAGTT s panTro5.chr3 2541532 46 - 202621043 CTGGGGTTGAGGCCCTAGAAGACGGTTCAGCG-TCAGCGTTTGAGTT i panTro5.chr3 T 94422 I 94423 s panPan2.chrUn_NW_014024201v1 131421 47 - 190779 CTGGGGTTGAGGCCCTAGAAGAGATCTCAGCGCTCAGCGTTTGAGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82378 47 - 106623 CTGGGGTTGAGGCCCTAGAAGAGGTCTCAGTGCTCAGCGTTTGAGTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945913 47 - 123690457 CTGGGGTTGCGGCCCTAGAAGAGGTCTCGGCACTCAGCGTTTGAGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354098 47 - 204787373 CTGGGGTTAAGGACCTACAGGAGGTCTCGGCACTCAGAGTTCGAGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419281 47 - 192460366 CTGGGGTTAAGGACCTACAGGAGGTCTCAGTACTCAGAGTTCGAGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158843 47 - 19675229 CTGGGGTTAAGGACCTACAGGAGGTCTCGGCACTCAGAGTTCGAGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396660 47 - 16847902 CTGGGGTTGAGGACCTACAGGAGGTCTCAGCACTCAGAGTTCGAGTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365596 47 + 91754291 CTGGGGTTGAGGACCTACAGGAGGTCTCAGCACTCAGAGTTTGAGTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434938 47 + 1977891 CTGGGGTTGAGGACCTACAGGAGGTCTCAGCACTCAGAGTTCGAGTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371522 47 - 7796314 CTGGGGTTGAGGACCTACAGGAGCTCTCAGCACTCAGAGTTCGAGTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849343 47 + 74750902 CTGGGTCTGAGGTCCTTGAAGAGGTCTGGGGGCTCCGCGTTTGAGAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17292488 47 - 17725628 CTGGGACTGAGGTCCTAGAAGAGGTCTCAGTGCTCAACGTGTGAGTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382671 47 + 6778120 CTGGGACTGAGGTCCTAGAAGAGGTCTCAGTGCTCATTGTGTGAGTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 20208 47 + 69927 CTGGGACTGAGGTCCCAGGAGAGGTCTCAGTGCTCAGCGTTTGAGTC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88394055 47 + 114275543 CTGGGATTAAGAGCCTAGAAAAGGTCTCAGTGCTCATAGTTTGAGTT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14799444 47 - 22200726 CTGGGATTAAGAGATTAGAAAAGGTCTCGATGCTCATAGTTTGAGTT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 211669 47 + 608964 CTGGGATTAAGATCGTAGAAAAAGTCTTGGTGTTCGGAGTTTGAGTT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32794749 47 + 98207768 TTGCACTTAAAGCATTAGAAGCAGATTCAGTGCTGAGAGTTTGCGTG i mm10.chr16 C 0 C 0 s canFam3.chr33 2327056 47 - 31377067 CCAGGATTAAGGTCCAATCAAACGTCTGGGGGCTCAGGGTTTGAGTT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2707062 47 - 6579706 TTAGGGGTAAGGTCCGAGTAGCGGTCTCATTGCTCAGGGTTTGAGTT i dasNov3.JH569502 C 0 C 0 a score=46684.000000 s hg38.chr3_KI270934v1_alt 69416 4 + 163458 TC---------------------------CA s panTro5.chr3 2636001 4 - 202621043 TC---------------------------CA i panTro5.chr3 I 94423 C 0 s panPan2.chrUn_NW_014024201v1 131468 4 - 190779 TC---------------------------CA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82425 4 - 106623 TC---------------------------CA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945960 4 - 123690457 TC---------------------------CA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354145 4 - 204787373 TC---------------------------CA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419328 4 - 192460366 TC---------------------------CA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158890 4 - 19675229 TC---------------------------CA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396707 4 - 16847902 TC---------------------------CA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365643 4 + 91754291 TC---------------------------CA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1434985 31 + 1977891 TCCAGAGCCGCGTGGCCTGGTGCTGGAGTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371569 4 - 7796314 TC---------------------------CA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849390 4 + 74750902 TC---------------------------TG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17292535 4 - 17725628 TC---------------------------CC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382718 4 + 6778120 TC---------------------------CG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 20255 4 + 69927 TC---------------------------CG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88394102 4 + 114275543 TC---------------------------CA i micMur3.chr1 C 0 I 122 s proCoq1.NW_012133858v1 14799491 4 - 22200726 TC---------------------------CA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 211716 4 + 608964 TC---------------------------CA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32794796 4 + 98207768 TC---------------------------TA i mm10.chr16 C 0 C 0 s canFam3.chr33 2327103 4 - 31377067 TC---------------------------CA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2707109 4 - 6579706 TC---------------------------CA i dasNov3.JH569502 C 0 C 0 a score=206932.000000 s hg38.chr3_KI270934v1_alt 69420 20 + 163458 GAGCGGC-GT-----------------------------------------GGCCC-----------------------GGTGCT s panTro5.chr3 2636005 20 - 202621043 GAGCGGC-GT-----------------------------------------GGCCC-----------------------GGTGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131472 20 - 190779 GAGCGGC-GT-----------------------------------------GGCCC-----------------------GGTGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82429 20 - 106623 GAGCAGC-GT-----------------------------------------GGCCC-----------------------GGTGCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945964 20 - 123690457 GAGAGGC-GT-----------------------------------------GACCC-----------------------GGTGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354149 20 - 204787373 GAGTGGC-GT-----------------------------------------GGCCT-----------------------GGTGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419332 20 - 192460366 GAGCGGC-GT-----------------------------------------GGCCT-----------------------GGTGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158894 20 - 19675229 GAGTGGC-GT-----------------------------------------GGCCT-----------------------GGTGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396711 20 - 16847902 GAGCGGC-GT-----------------------------------------GGCCT-----------------------GGTGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365647 20 + 91754291 GAGCGGC-GT-----------------------------------------GGCCT-----------------------GGTGCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435016 20 + 1977891 GAGCGGC-GT-----------------------------------------GGCCT-----------------------GGTGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371573 20 - 7796314 GAGCGGC-GT-----------------------------------------GGCCT-----------------------GGTGCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849394 20 + 74750902 AAGCAGC-GT-----------------------------------------GGCTG-----------------------GGTGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17292539 20 - 17725628 AAGCAGC-GT-----------------------------------------GGCCG-----------------------GGTGCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382722 20 + 6778120 AAGCAGC-GT-----------------------------------------GGCTG-----------------------GGTGCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 20259 20 + 69927 AGGCAGC-GT-----------------------------------------GGCCG-----------------------GGTGCT i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14799495 20 - 22200726 AAGCGAC-GT-----------------------------------------GGCCT-----------------------GGTGCT i proCoq1.NW_012133858v1 C 0 I 99 s otoGar3.GL873829 211720 44 + 608964 AAGCAAAGGT-----------------------------------------GGTCTCAGTGAGGTCAGTGATCTGGAAGGGTTCC i otoGar3.GL873829 C 0 I 21 s mm10.chr16 32794800 61 + 98207768 GAGGTAC-ATACTGAATCAGGTTGGTGGTCTGGAAAGCTCTCTCTGAGCTGGGCCT-----------------------GTCCCT i mm10.chr16 C 0 I 1 s canFam3.chr33 2327107 20 - 31377067 AAGGCAT-GT-----------------------------------------GGCTT-----------------------GGCACA i canFam3.chr33 C 0 I 57 s dasNov3.JH569502 2707113 20 - 6579706 AAGGGAT-GT-----------------------------------------GGCCT-----------------------GGGGCT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88394106 122 + 114275543 I a score=71458.000000 s hg38.chr3_KI270934v1_alt 69440 12 + 163458 AGAGTCATAGCG--------------------------------------------------------- s panTro5.chr3 2636025 12 - 202621043 GGAGTCATAGCG--------------------------------------------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131492 12 - 190779 GGAGTCATAGCG--------------------------------------------------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82449 12 - 106623 GGAGTCATAGCG--------------------------------------------------------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945984 12 - 123690457 GGAGTCATAGCG--------------------------------------------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354169 12 - 204787373 GGAATCATAGCG--------------------------------------------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419352 12 - 192460366 GGAATCATAGCG--------------------------------------------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158914 12 - 19675229 GGAATCATAGCG--------------------------------------------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396731 12 - 16847902 GGAGTCGGAGCG--------------------------------------------------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365667 12 + 91754291 GGAATCATAGTG--------------------------------------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435036 12 + 1977891 GGAGTCAGAGCG--------------------------------------------------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371593 12 - 7796314 GGAGTCATAGCG--------------------------------------------------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849414 12 + 74750902 GAGGTCTCAGTG--------------------------------------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17292559 12 - 17725628 GAGGTCTCGGTA--------------------------------------------------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382742 12 + 6778120 GAGGTCTCAGTG--------------------------------------------------------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 20279 12 + 69927 GAGGTCTCAGTG--------------------------------------------------------- i aotNan1.NW_018503669v1 C 0 I 43 s otoGar3.GL873829 211785 12 + 608964 GGAGTCACCATA--------------------------------------------------------- i otoGar3.GL873829 I 21 C 0 s mm10.chr16 32794862 12 + 98207768 TGAGTGAAGGTG--------------------------------------------------------- i mm10.chr16 I 1 C 0 s canFam3.chr33 2327184 12 - 31377067 GGAGTCATGGCA--------------------------------------------------------- i canFam3.chr33 I 57 C 0 s dasNov3.JH569502 2707133 69 - 6579706 GAGGTCTCGGTGAGGTCAGTGGCCCAGAAGGCTCCCCCTGATCCTGTCCTGAGCCCTGGAGATACAGCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14799515 99 - 22200726 I e micMur3.chr1 88394106 122 + 114275543 I a score=15074.000000 s hg38.chr3_KI270934v1_alt 69452 2 + 163458 GG- s panTro5.chr3 2636037 2 - 202621043 GG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131504 2 - 190779 GG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82461 2 - 106623 GG- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945996 2 - 123690457 GG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354181 2 - 204787373 GG- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419364 2 - 192460366 GG- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158926 2 - 19675229 GG- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396743 2 - 16847902 GG- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365679 2 + 91754291 GG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435048 2 + 1977891 GG- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371605 2 - 7796314 AG- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849426 2 + 74750902 AG- i calJac3.chr17 C 0 I 62 s saiBol1.JH378146 17292571 2 - 17725628 AG- i saiBol1.JH378146 C 0 I 57 s cebCap1.NW_016107444v1 6382754 2 + 6778120 AG- i cebCap1.NW_016107444v1 C 0 I 57 s otoGar3.GL873829 211797 2 + 608964 GG- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32794874 1 + 98207768 -G- i mm10.chr16 C 0 I 1 s canFam3.chr33 2327196 2 - 31377067 GG- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2707202 2 - 6579706 -GA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14799515 99 - 22200726 I e aotNan1.NW_018503669v1 20291 43 + 69927 I e micMur3.chr1 88394106 122 + 114275543 I a score=158120.000000 s hg38.chr3_KI270934v1_alt 69454 14 + 163458 CACTTCTGTGTCGT s panTro5.chr3 2636039 14 - 202621043 CACTTCTGTGTCGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131506 14 - 190779 CACTTCTGTGTCGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82463 14 - 106623 CACTTCTGTGTCGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2945998 14 - 123690457 CACTTCTGTGTCGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354183 14 - 204787373 CACTTCTGTGTCGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419366 14 - 192460366 CACTTCTGTGTCGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158928 14 - 19675229 CACTTCTGTGTCGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396745 14 - 16847902 CACTTCTGTGTCGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365681 14 + 91754291 CACTTCTGTGTCGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435050 14 + 1977891 CACTTCTGTGTCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371607 14 - 7796314 CACTTCTGCGTCAT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17292630 14 - 17725628 CACTTCTGTGGCGT i saiBol1.JH378146 I 57 C 0 s cebCap1.NW_016107444v1 6382813 14 + 6778120 CACTTCTGTGGCGT i cebCap1.NW_016107444v1 I 57 C 0 s otoGar3.GL873829 211799 14 + 608964 CACTTCTATGTCAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32794876 14 + 98207768 CACTTCCATGTTGT i mm10.chr16 I 1 C 0 s canFam3.chr33 2327198 14 - 31377067 CTCTTCTACGTGGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2707204 14 - 6579706 CATTTTGATGTGGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14799515 99 - 22200726 I e aotNan1.NW_018503669v1 20291 43 + 69927 I e micMur3.chr1 88394106 122 + 114275543 I e calJac3.chr17 73849428 62 + 74750902 I a score=20379.000000 s hg38.chr3_KI270934v1_alt 69468 3 + 163458 CCG s panTro5.chr3 2636053 3 - 202621043 CCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131520 3 - 190779 CCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82477 3 - 106623 CCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946012 3 - 123690457 CTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354197 3 - 204787373 CCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419380 3 - 192460366 CCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158942 3 - 19675229 CCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396759 3 - 16847902 CCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365695 3 + 91754291 CCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435064 3 + 1977891 CCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371621 3 - 7796314 CCC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17292644 3 - 17725628 CTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382827 3 + 6778120 CTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 20334 3 + 69927 CTG i aotNan1.NW_018503669v1 I 43 C 0 s otoGar3.GL873829 211813 3 + 608964 CTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32794890 2 + 98207768 -TG i mm10.chr16 C 0 I 1 s canFam3.chr33 2327212 3 - 31377067 TTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2707218 3 - 6579706 TTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14799515 99 - 22200726 I e micMur3.chr1 88394106 122 + 114275543 I e calJac3.chr17 73849428 62 + 74750902 I a score=144803.000000 s hg38.chr3_KI270934v1_alt 69471 11 + 163458 TTGTCATCGCA s panTro5.chr3 2636056 11 - 202621043 TTGTCATCGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131523 11 - 190779 TTGTCATCGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82480 11 - 106623 TTGTCATCGCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946015 11 - 123690457 TTGTCGTCGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354200 11 - 204787373 TTGTCATCGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419383 11 - 192460366 TTGTCATCGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158945 11 - 19675229 TTGTCATCGCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396762 11 - 16847902 TTGTCATCGCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365698 11 + 91754291 TTGTCATCGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435067 11 + 1977891 TTGTCATCGCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371624 11 - 7796314 CTGTCATCGCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849490 11 + 74750902 CTGTCATCGCA i calJac3.chr17 I 62 C 0 s saiBol1.JH378146 17292647 11 - 17725628 CTGTCACCGCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382830 11 + 6778120 CTGTCACCGCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 20337 11 + 69927 GAGTCATCGCA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 211816 10 + 608964 CTGTCACC-CA i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32794893 11 + 98207768 TTGTCACCAAA i mm10.chr16 I 1 C 0 s canFam3.chr33 2327215 11 - 31377067 CTGTCACCACA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2707221 11 - 6579706 TTGTCACCAAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14799515 99 - 22200726 I e micMur3.chr1 88394106 122 + 114275543 I a score=15824.000000 s hg38.chr3_KI270934v1_alt 69482 3 + 163458 GTG s panTro5.chr3 2636067 3 - 202621043 GTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131534 3 - 190779 GTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82491 3 - 106623 GTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946026 3 - 123690457 GTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354211 3 - 204787373 GCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419394 3 - 192460366 GCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158956 3 - 19675229 GCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396773 3 - 16847902 GCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365709 3 + 91754291 GCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435078 3 + 1977891 GCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371635 3 - 7796314 GCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849501 3 + 74750902 TTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17292658 3 - 17725628 GTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382841 3 + 6778120 GTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 20348 3 + 69927 GTT i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14799614 3 - 22200726 GTG i proCoq1.NW_012133858v1 I 99 C 0 s otoGar3.GL873829 211827 3 + 608964 GTG i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32794904 3 + 98207768 GGA i mm10.chr16 C 0 C 0 s canFam3.chr33 2327226 3 - 31377067 GGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2707232 3 - 6579706 GAG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88394106 122 + 114275543 I a score=593096.000000 s hg38.chr3_KI270934v1_alt 69485 38 + 163458 TCTGCTCTGCGGGTGCTGGGGCCTGTGTTGGT-TAAGAC s panTro5.chr3 2636070 38 - 202621043 TCTGCTCTGCGGGTGCTGGGGCCTGTGTTGGT-TAAGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131537 38 - 190779 TCTGCTCTGCGGGTGCTGGGGCCTGTGTTGGT-TAAGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82494 38 - 106623 TCTGCTCTGCGGGTGCTGGGGCCTGTGTTGGT-TAAGAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946029 38 - 123690457 TCTGCTCTGCGGGTGCTGGGGCCTGTGTTGGT-TAAGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354214 38 - 204787373 TCTGCTCTGCGGCTGCTGGGGCCTGTGTTGGT-TAAGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419397 38 - 192460366 TCTGCTCTGCGGCTGCTGGGGCCTGTGTTGGT-TAAGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158959 38 - 19675229 TCTGCTCTGCGGCTGCTGGGGCCTGTGTTGGT-TAAGAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396776 38 - 16847902 TCTGCTCTGCGGCTGCTGGGGCCTGTGTTGGT-TAAGAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365712 38 + 91754291 TCTGCTCTGTGGCTGCCGGGGCCTGTGTTGGT-TAAGAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435081 38 + 1977891 TCTGCTCTGCGGCTGCTGGGGCCTGTGTTGGT-TAAGAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371638 38 - 7796314 TCTGCTCTGCGGCTGCTGGGGCCTGTGTTGGT-TAAGAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849504 38 + 74750902 TCTGGGCTGCTGGTGCCAGGGCCTGTGGTGGT-TAAGAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17292661 38 - 17725628 TCTGGTCTGCTGGTGCCAGGGCCTGTGGTGGT-TAAGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382844 35 + 6778120 TCTGGTCTGCCGGTGCCAGGGCCTGTGGTG----AAGAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 20351 38 + 69927 TCTGGTCTGCTGGTGCCGGGGCCTGTGGTGGT-TAGGAC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88394228 38 + 114275543 TCTGGTCTGCTGGTGCTGGGGCCTGTGTTGGG-TAAGAC i micMur3.chr1 I 122 I 114 s proCoq1.NW_012133858v1 14799617 38 - 22200726 TCTGGTCTGCTGGTGCTGGGGCCTGTGTTGGG-TAAGAC i proCoq1.NW_012133858v1 C 0 I 139 s otoGar3.GL873829 211830 39 + 608964 TCTGGTCTGCTGGTGTGTGGGCCTGTGTTGGGTTAAGAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32794907 38 + 98207768 ACTGATCTGCTAATGTCGAGACCTGTGTGGGA-TGAGAA i mm10.chr16 C 0 C 0 s canFam3.chr33 2327229 38 - 31377067 CCTGGTCTGCTGGTGCTGGGGCCTGTGTTGGG-TAAGAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2707235 38 - 6579706 TCTGATCTCCTGGAACTGGGGCCTGCATTGGA-TAAAAC i dasNov3.JH569502 C 0 C 0 a score=1429971.000000 s hg38.chr3_KI270934v1_alt 69523 133 + 163458 TGACTTGGTGAGCC-TGGGTTCCAGTG----GACTTCACACA-----------AGCTATTGCATTTACACCCT-GGGCACTTCTGGGAGGAGGGTGGGGCAGGGGA-G-TGCCGTTA-CCTCATTTTTCATCTACATAAGCGAACAAGAAGGA s panTro5.chr3 2636108 133 - 202621043 TGACTTGGTGAGCC-TGGGTTCCAGTG----GACTTCACACA-----------AGCGATTGCGTTTACACCCT-GGGCACTTCTGGGAGGAGGGTGGGGCGGGGGA-G-TGCCGTTA-CCTCACTTTTCATCTACATAAGCGAACAAGAAGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131575 133 - 190779 TGACTTGGTGAGCC-TGGGTTCCAGTG----GACTTCACACA-----------AGCGATTGCGTTTACACCCT-GGGCACTTCTGGGAGGAGGGTGGGGCGGGGGA-G-TGCCGTTA-CCTCACTTTTCATCTACATAAGCGAACAAGAAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82532 133 - 106623 TGACTTGGTGAGCC-TGGGTTCCAGTG----GACTTCACACA-----------AGCTATTGCGTTTACACCCT-GGGCACTTCTGGGAGGAGGGTGGGGCGGGGGA-G-TGCCGTTA-CCTCATTTTTCATCTACATAAGCGAACAAGAAGGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946067 132 - 123690457 TGACTTGTTGAGCC-TGGGTTCCAGTG----GGCTTCACACA-----------AGCTATCGCGTTTACACCCT-GGGCACTTCTTGGGGGAGGGT-GGGCAGGGGA-G-TGCCGTTA-CCTCATTTTTCATCTACATAAGCGAACAAGAAGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354252 133 - 204787373 TGACTTGGTGAGCC-TGGGTTCCAGTG----GACTTCACGCA-----------AGCGATTTCGTTTACACCCT-GGGCACTTCTGGGAGGAGGGTGGGGAGGGGAA-G-TGCTGTTA-CCTCCTTTTTCATCTACATAAGTGAACAAGAAGGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419435 133 - 192460366 TGACTTGGTGAGCC-TGGGTTCCAGTG----GACTTCACGCA-----------AGCGATTTCGTTTACACCCT-GGGCACTTCTGGGAGGAGGGTGGGGAGGGGAA-G-TGCTGTTA-CCTCCTTTTTCATCTACATAAGCGAACAAGAAAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19158997 133 - 19675229 TGACTTGGTGAGCC-TGGGTTCCAGTG----GACTTCACGCA-----------AGCGATTTCGTTTACACCCT-GGGCACTTCTGGGAGGAGGGTGGGGAGGGGAA-G-TGCTGTTA-CCTCCTTTTTCATCTACATAAGCGAACAAGAAGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396814 133 - 16847902 TGACTTGGTGAGCT-TGGGTTCCAGTG----GACTTCACGCG-----------AGCGATTTCGTTTACACCCT-GGGCACTTCTGGGAGGAGGGTGGGGAGGGGAA-G-TGCTGTTA-CCTCCTTTTTCATCTACATAAGCGAACAAGAAGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365750 133 + 91754291 TGACTTGGTGAGCC-TGGGTTCCAGTG----GATTTCACACG-----------AGCGATTTCGTTTACACCCT-GGGCACTTCTGGGAGGAGGGTGGGGAGGGGAA-G-TGCTGTTA-CCTCCTTTTTCATCTACATAAGCGAACAAGAAGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435119 133 + 1977891 TGACTTGGTGAGCC-TGGGTTCCAGTG----GACTTCACGCA-----------AGCGATTTCGTTTACACCCT-GGGCACTTCTGGGAGGAGGGTGGGGAGGGGAA-G-TGCTGTTA-CCTCCTTTTTCTTCTACATAAGCGAACAAGAAGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371676 134 - 7796314 TGACTTGGTGAGCC-TGGGTTCCAGTG----GACTTCACACA-----------AGCGATTTCGTTTACACCCT-GGGCACTTCTGGGAGGAGGGTGGGGAGGGGAA-G-TGCTGTTACCCTCCTTTTTCATCTACATAAGCGAACAAGAAGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849542 111 + 74750902 TGACTCGGTGA----------------------CTTCACGCA-----------AGCGACTGTGTTTATACCCT-GCGCACCTCTGGGAGGAGGGTGGGGACGGGCA-G-TGCTGTTA-CCTCGTTTTTCATCTGCATAAGCAAAGAAG----- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17292699 131 - 17725628 TGACTCGGTGAAGC-TGAGTTCCAGCA----GCCTTCACGCA-----------AGCTACTGCGTTTATACCCCGGGGCACCTCTGGGAGGAGGGTGGGGACGGGCG-G-TGCTGTTA-CCTCGTTTTTCATCTGCGTAAGCAAAGGAG---GA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6382879 133 + 6778120 TGACTCGGTGAGGC-TGAGTTCCACTG----GACTTCACGCA-----------AGCTACTGCGTTTATTCCCT-GGGCACCTCTGGGAGGAGGGTGGGGACGGGCA-G-TGCTGTTA-CCTCGTTTTTCATCTGCGTAAGCAAAGAAGGAGGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 20389 133 + 69927 TGACCCAGTGAGGC-TGAGCTCCAGTG----GACTTCACGTG-----------AGCCACTGCATTTATACCCT-GGGCACCTCTGGGAGGAGGGTGGGGACGGGCA-G-TGCTGTTA-CCTCGTTTTTCATCTGCATAAGCAAAGAAGGAGGA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 211869 129 + 608964 CGAATTTGTGAGCT-TTGA------TG----GATGCCACACATAAGATGTCAGAGCTCTTATGTTTATGATCT-GGGTA----------GAGGATGGGGAGGGGGAGG-TGCTCTTA-TCCCATTTTTTATCTATTTAAACAAGAAAAAAGGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32794945 98 + 98207768 CAACCTGGTGA-------GTGCCAGTG----GACT------------------GACATCACAGTTTATGCCCT-AGGTGCTATTG----GATGGCATGGAGGGTCA---------------------TCATCTACATAAACCTAGAGGATGAA i mm10.chr16 C 0 C 0 s canFam3.chr33 2327267 138 - 31377067 CAGCTTTGTAAGCCACGAGTCCCAGTGGGCCGACTTCGCACA-----------AGCTCTTGTGCTTATGCCCT-GGGCACC-CTGGGAGGAGGGTGGGGAGGGGAA-GTTGCTTCTA-TTTCATTTTTCATCTACACATACAAGGAAGGAGGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2707273 136 - 6579706 CAATTCTGTAAGCCTTGAGTGCCAGGA--CTGACTCCACACC-----------TACTCTTGTGTTTATGCCCT-GGATACTGCTGGGAGGAGGGTGGGTAAGGGGA-A-TGGTTTTA-TCCAATTTTTCATCTAATTAAACAAGGAAGAAGGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14799655 139 - 22200726 I e micMur3.chr1 88394266 114 + 114275543 I a score=289838.000000 s hg38.chr3_KI270934v1_alt 69656 27 + 163458 GGCAGTCCTGGGAAGCCCAGGCCTGTG s panTro5.chr3 2636241 27 - 202621043 GGCAGTTCTGGGAAGCCCAGGTCTGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131708 27 - 190779 GGCAGTTCTGGGAAGCCCAGGCCTGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82665 27 - 106623 GGCAGTCCTGGGAAACCCAGGCCTGTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946199 26 - 123690457 GGGAGTCCTGGGAAGCCCAGGCCCA-G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354385 27 - 204787373 GGCAGTCCTGGGAAGCCCAGGCCCATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419568 27 - 192460366 GGCAGTCCTGGGAAGCCCAGGCCCATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159130 27 - 19675229 GGCAGTCCTGGGAAGCCCAGGCCCATG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396947 27 - 16847902 GGCAGTCCTGGGAAGCCCAGGCCCGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365883 27 + 91754291 GGCAGTCCTGGGAAGCCCAGGCCCGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435252 27 + 1977891 GGCAGTCCTGGGAAGCCCAGGCCCGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371810 27 - 7796314 GGCAGTTCTGGGAAGCCCAGGCCCGTG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17292830 27 - 17725628 GGCAGTCCTGGGAGGCCCAGGCCCGTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6383012 27 + 6778120 GGCAGTCCTGGGAGGCCCAGGCCCCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 20522 27 + 69927 GGCAGTCCTGGGAGGCCCAGGCCCGTG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88394380 24 + 114275543 GGCAGTGCTGGGAAGCCCAGCCCC--- i micMur3.chr1 I 114 C 0 s otoGar3.GL873829 211998 27 + 608964 GGCAGTGCTGAGAAGCCCAGTTCCATG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32795043 27 + 98207768 GGCAGCACAGAGAAGCCAAAGCCTTCA i mm10.chr16 C 0 C 0 s canFam3.chr33 2327405 25 - 31377067 GGTGTATC--AGAAGACCGGCCCCATG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2707409 7 - 6579706 AACAGTG-------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14799655 139 - 22200726 I e calJac3.chr17 73849653 0 + 74750902 C a score=2162892.000000 s hg38.chr3_KI270934v1_alt 69683 162 + 163458 TGGCAGCCATGGAGCTGGGGTTGCCATGACTGGCGTCCTCTGAAACCCTGACAACT-CACTTGGGGCCAGCAAGCCCCAGGATCTG--CTGGCTATCGGCCTGC-GTCTTTAAGA-GGGGATGTGTGGGG-CCAGCGTCCACCTTCCAGGGTGAGCCAAGAAGGCAGA----------------- s panTro5.chr3 2636268 162 - 202621043 TGGCAGCCATGGAGCTGGGGTTGCCATGGCTGGCGTCCTCTGAAGCCCTGACAACT-CACTTGGGGCCAGCAAGCCCCAGGATCTG--CTGGCTATCGGCCTGC-GTCTTTAAGA-GGGGATGTGTGGGG-CCAGCATCCATCTTCCAGGGTGAGCCAAGAAGGCAGA----------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131735 163 - 190779 TGGCAGCCATGGAGCTGGGGTTGCCATGGCTGGCGTCCTCTGAAGCCCTGACAACT-CACTTGGGGCCAGCAAGCCCCAGGATCTG--CTGGCTATCGGCCTGC-GTCTTTAAGAGGGGGATGTGTGGGG-CCAGCGTCCACCTTCCAGGGTGAGCCAAGAAGGCAGA----------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82692 162 - 106623 TGGCAGCCATGGAGCTGGGGTTGCCATGGCTGGCATCCTCTGAAGCCCTGACAACT-CACTTGGGGCCAGCAAGCCCCAGGATCTG--CTGGCTATCGGCCTGC-GTCTTTAAGA-GGGGATGTGTGGGG-CCAGCGTCCATCTTCCAGGGTAAGCCAAGAAGGCAGA----------------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946225 162 - 123690457 CGGCAGCCACGGAGCTGGGGTTGCCATGACTAGCGTCCTCTGAAGCCCCGACAGCT-CACTTGGGGCCAGCAAGCCCTGGGATCTG--CTGGCTCTCGGCCTGC-GTCTTTAAGA-GGGGATGTGTGGGG-CCAGCGTCCACCTTCCAGGGTGAGCCAAGAAGGCAGA----------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354412 162 - 204787373 TGGCAGCCACAGAGCTGGGGTTGCCATGACTGGCGTCCTCTGAAGCCCTGACAACT-CACTAGGGGCCAGCAAGCCCCGGGATCTG--CTGGCTCTCGGCCTGC-GTCTTTAACA-GGGGATGAGTGGGG-CCAGCGCCCACCTTCCAGGGTGAGCCAAGAAGGCAGA----------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419595 162 - 192460366 TGGCAGCCACAGAGCTGGGGTTGCCATGACTGGCGTCCTCTGAAGCCCTGACAACT-CACTAGGGGCCAGCAAGCCCCGGGATCTG--CTGGCTCTCGGCCTGC-GTCTTTAACA-GGGGATGAGTGGGG-CCAGCGTCCACCTTCCAGGGTGAGCCAAGAAGGCAGA----------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159157 162 - 19675229 TGGCAGCCACAGAGCTGGGGTTGCCATGACTGGCGTCCTCTGAAGCCCTGACAACT-CACTAGGGGCCAGCAAGCCCCGGGATCTG--CTGGCTCTCGGCCTGC-GTCTTTAACA-GGGGATGAGTGGGG-CCAGCGCCCACCTTCCAGGGTGAGCCAAGAAGGCAGA----------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16396974 162 - 16847902 TGGCAGCCACAGAGCTGGGGTTGCCATGACTGGCGTCCTCTGAAGCCCTGACAACT-CACTAGGGGCCAGCAAGCCCCGGGATCTG--CTGGCTCTCGGCCTGC-GTCTTTAACG-GGGGATGAGTGGGG-CCAGCGTCCACCTTCCAGGGTGAGCCAAGAAGGCAGA----------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91365910 162 + 91754291 TGGCAGCCACAGAGCTGGGGTTGCCATGACTGGCGTCCTCTGAAGCCCTGACCACT-CACTAGGGGCCAGCAAGCCACGGGATCTG--CTGGCTCTCGGCCTGC-GTCTTTAACA-GGGGATGAGTGGGG-CCAGCGTCCACCTTCCAGGGTGAGCCAAGAAGGCAGA----------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435279 162 + 1977891 TGGCAGCCACAGAGCTGGGGTTGCCATGACTGGCGTCCTCTGAAGCCCTGACAACT-CACTAGGGGCCAGCAAGCCCCGGGATCTG--CTGGCTCTCGGCCTGC-GTCTTTAACA-GGGGATGAGTGGGG-CCAGCGTCCACCTTCCAGGGTGAGCCAAGAAGGCAGA----------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371837 162 - 7796314 TGGCAGCCACAGAGCTGGGGCTGCCATGACTGGTGTCCTCTGAAGCCCTGACAACT-CACTAGGGGCCAGCAAGCCCCGGGATCTG--CTGGCTCTCGGCCTGC-GTCTTTAACA-GGGGATGAGTGGGG-CCAGCATCCACCTTCCAGGGTGAGCCAAGAAGGCAGA----------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849653 113 + 74750902 -------------------------------------------------GACAACC-CACTTGGGGCCAGCAAGCCCCGGGATCCT--GTGGTTCTCGGCCTGC-GGCTTTGAGA-AGGGATGTGTGGGG-CCAGTGTCCGCCTTCCAGGGTGAGCCAAGAAGACAGA----------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17292857 162 - 17725628 CGGCAGCCATGGAGCCGGCGCTGCCCTGCCTGGCGCCCTCCGAAGCCCTGACAACC-CGCTTGGGGCCAGCAAGCCCTGGGATCCT--GTGGCTCCTGGCCTGC-GGCTTTGAGA-AGGGACGTGTGGGG-CCAGCGTCCACCTTCCAGGGTGAGCCAAGAAGACAGG----------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6383039 162 + 6778120 CGGCGGGCACGGAGCTGGAGCTGCCCTGACTGGCGTCCTCTGAAGCCCTGACAACC-CACTTGGGGCCAGCCAGCCCCGGGATCCT--GTGGCTCTCGGCCTGT-GGCTTTGAGA-AGGGACCTGTGGGG-CCAGCGTCCACCTTCCAGGGTGAGCCAAAAAGACAGG----------------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 20549 162 + 69927 TGGCAGCCACGGAGCTGCAGCTGCCCTGACTGGCATCCTCCAAAGCCCTGACAACC-CACTTGGGGCCAGCAAGCCCCGGGATCCT--GTGGCTCTCGGCCTGC-GGCTTTGAGA-AGGGATGTGTGGGG-CCAGCGTCCACCTTCCAGGGTGAGCCAAGAAGACAGA----------------- i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88394404 164 + 114275543 TGGCAGCCACAGAGTTGGGGTTGCCCAGACTGGTGCCTTCTGAAGCCCCGACAGCC-CACTTGAGGCCAGCAAGCCCCACAATCCCAGCTGATTATCGGTCTGT-GGCCTTCCAA-GGGAATGTGTGGGG-CCACGATCCACCTTTAAGGGTGAGCAAAGAAGGCAGA----------------- i micMur3.chr1 C 0 I 1539 s proCoq1.NW_012133858v1 14799794 164 - 22200726 TGGCAGCCACAGAGCCGGGGTTGCCCTGACTGGTGTCTGCTGAAGCCCTGACAACC-CACTTGAGGTCAGCAAGCCCCACAGTCCTAGCTGATTATTGGCGTGT-GGCCTTCAGA-GGGAATGTGTGGGG-CCAGGATCCACCTTCAAGGGTGAGCAAGAAAGGCAGA----------------- i proCoq1.NW_012133858v1 I 139 I 106 s otoGar3.GL873829 212025 162 + 608964 TGGCAAGCACAGAGCTGGGGTTGCCCTAACTGGTGTGCTCTGAAG-CCTGACAACC-CACTTGAGGCCAGCAAGCTCCACAGTCTCA-CTGATTATTGGTCTGT-GACCTTCAAT-GGGAATGTGTGGGG-CCAGGATCCACCTGCAAGGGTGAGCAAAGAAACTCGA----------------- i otoGar3.GL873829 C 0 I 29 s mm10.chr16 32795070 143 + 98207768 CAGCAGCCCCGAAGACAT-GCTACCCCAACTAGTGCTCTCTGAAGCCCTGACAACTGCCCCCTGCCCCAAAGGATCCCAG--------CTGACCCCGGGTCTAC-AGCTCAGCCT-CA--------------CAGCATATACCGACTAAGGCAGGCAAAGAAGACAGG----------------- i mm10.chr16 C 0 I 6 s canFam3.chr33 2327430 154 - 31377067 GGTCAACCATGGAACTGGGATC-CCCTGACTGATGTCCTCTGATG--------ACC-CTGTTGAGACAAGCAGGCCTCAGAATTGAG-TTGATTATTGGTCTGA-AGCCATCAGA-GGGAAGGCTTGGGG-CCAGGACACAGCCTTGATGGGGGGCAAAGAAGCCAGG----------------- i canFam3.chr33 C 0 I 26 s dasNov3.JH569502 2707416 181 - 6579706 TGGTACCCATGGAACTGGGGTTGCCCTGGCATACGTGCTTGGAAACCCAATTTACC-CATTTGAGGCAAGCAAACCCAGAAGCTTCA-TTGATCATGAGTCTGCAGGCCATCAGA-GGGAATACATTGTGCCCATGATCCAGCTTCCAGGGT-AGCAAAGAAGGTAGAAGGCTAAGAACTGCAGA i dasNov3.JH569502 C 0 C 0 a score=184978.000000 s hg38.chr3_KI270934v1_alt 69845 15 + 163458 CCA-GCGTCCAGGACT s panTro5.chr3 2636430 15 - 202621043 CCA-GCGTCCAGGACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131898 15 - 190779 CCA-GCGTCCAGGACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82854 15 - 106623 CCA-GTGTCCAGGACT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946387 15 - 123690457 CCA-GCGTCCAGGACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354574 15 - 204787373 GCA-GCGTTCAGGACT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419757 15 - 192460366 GCA-GCGTCCAGGACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159319 15 - 19675229 GCA-GCGTCCAGGACT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397136 15 - 16847902 GCA-GCGTCCAGGACT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366072 15 + 91754291 GCA-GCGTCCAGGACT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435441 15 + 1977891 GCA-GCGTCCAGGACT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7371999 15 - 7796314 GCA-GCGTCCAGGACT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849766 15 + 74750902 GCA-GTGGCCAGGACT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17293019 15 - 17725628 GCA-GTGGCCAGGACT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6383201 15 + 6778120 GCA-GTGGCCAGGACT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 20711 15 + 69927 GCA-GTGGCCAGGACT i aotNan1.NW_018503669v1 C 0 I 88 s otoGar3.GL873829 212216 15 + 608964 GCA-GAGACCAGGAAA i otoGar3.GL873829 I 29 I 1 s mm10.chr16 32795219 15 + 98207768 -CATGAGCCAAGGACT i mm10.chr16 I 6 C 0 s canFam3.chr33 2327610 15 - 31377067 GCA-GGGACCAGGACT i canFam3.chr33 I 26 C 0 s dasNov3.JH569502 2707597 15 - 6579706 GCA-GGCACTAGGACT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14799958 106 - 22200726 I e micMur3.chr1 88394568 1539 + 114275543 I a score=86246.000000 s hg38.chr3_KI270934v1_alt 69860 8 + 163458 CGCAGAGC s panTro5.chr3 2636445 8 - 202621043 CGCAGAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131913 8 - 190779 CGCAGAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82869 8 - 106623 CGCAGAGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946402 8 - 123690457 CGCAGAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354589 8 - 204787373 CGCAGAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419772 8 - 192460366 CGCAGAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159334 8 - 19675229 CGCAGAGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397151 8 - 16847902 CGCAGAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366087 8 + 91754291 TGCAGAGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435456 8 + 1977891 CGCAGAGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7372014 8 - 7796314 CGCAGAGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849781 8 + 74750902 CGAGGAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17293034 8 - 17725628 CGAGGAGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6383216 8 + 6778120 CGAGGAGC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 212232 8 + 608964 CTCATAAT i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32795234 7 + 98207768 -GCAGAGC i mm10.chr16 C 0 I 1607 s canFam3.chr33 2327625 8 - 31377067 CTCAGAAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2707612 8 - 6579706 CTCAGAAT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14799958 106 - 22200726 I e aotNan1.NW_018503669v1 20726 88 + 69927 I e micMur3.chr1 88394568 1539 + 114275543 I a score=465058.000000 s hg38.chr3_KI270934v1_alt 69868 48 + 163458 TTTCT----G-----AACCTCTGTCGCCTTCCC-CGGGTACTTTTCTCATCCAACACA s panTro5.chr3 2636453 48 - 202621043 TTTCT----G-----AACCTCTGTCCCCTTCCC-CGGATACTTTTCTCATCCAACACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131921 48 - 190779 TTTCT----G-----AACCTCTGTCCCCTTCCC-CAGATCCTTTTCTCATCCAACACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82877 48 - 106623 TTTCT----G-----AACCTCTGTCCCCTTCCC-CGGATACTTTTCTCATCCAACACA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946410 48 - 123690457 TTTCT----G-----AACCTGTGTCTCCTTCCC-CGGATACTTTTCTCATCCAACACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354597 48 - 204787373 TTTCT----G-----AACCTGTGTCCCCTTCCC-CGGCCACTTTTCTCATCCAACACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419780 48 - 192460366 TTTCT----G-----AACCTGTGTCCCCTTCCC-CGGCCACTTTTCTCATCCAACACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159342 48 - 19675229 TTTCT----G-----AACCTGTGTCCCCTTCCC-CGGCCACTTTTCTCATCCAACACA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397159 48 - 16847902 TTTCT----G-----AACCTGTGTCCCCTTCCC-CGGCCACGTTTCTTATCCAACACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366095 48 + 91754291 TTTCT----G-----AACCTGTGTCCCCTTCCC-CGGCCACTTTTCTCATCCAACACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435464 48 + 1977891 TTTCT----G-----AACCTGTGTCCCCTTCCC-CGGCCACGTTTCTCATCCAACACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7372022 48 - 7796314 TTTCT----G-----AACCTGTGTCCCCTTCCC-CGGCCACTTTTCTCATCCAACACA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849789 47 + 74750902 -TTCT----G-----AACCTGTGTCACCTTCCC-GGGACACTTTTCTCATCCACCATA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17293042 47 - 17725628 -TTCT----G-----AACCTGTGTCCCCTTCCT-GGGATACTTTCCCCATCTACCACA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6383224 47 + 6778120 -TTCT----G-----AACCTGTGTCCCCTTCCC-GGGATACTTCCCTCATCCACCACA i cebCap1.NW_016107444v1 C 0 I 48 s otoGar3.GL873829 212240 53 + 608964 TTTCTGAAAG-----AATCCTTGTCATTCTCCCATGGATTCTTTTCTCATCTAACAAA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2327633 53 - 31377067 -TTTT----GGAAGAAATCCCTGTCACCTGCCCATCGAAACTTCCCTCATCCAGCAGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2707620 50 - 6579706 TTCCTGAATG-----AATCTTTGTTTTTTTCCC---AACACTTTTCTTATACAACAAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14799958 106 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 20726 88 + 69927 I e micMur3.chr1 88394568 1539 + 114275543 I a score=15710.000000 s hg38.chr3_KI270934v1_alt 69916 3 + 163458 TAG s panTro5.chr3 2636501 3 - 202621043 TAC i panTro5.chr3 C 0 T 94341 s panPan2.chrUn_NW_014024201v1 131969 3 - 190779 TAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82925 3 - 106623 TAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946458 3 - 123690457 GGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354645 3 - 204787373 TAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419828 3 - 192460366 TAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159390 3 - 19675229 TAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397207 3 - 16847902 TAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366143 3 + 91754291 TAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435512 3 + 1977891 TAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7372070 3 - 7796314 TAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849836 3 + 74750902 CGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17293089 3 - 17725628 CGC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 212293 3 + 608964 TAT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2327686 3 - 31377067 TGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2707670 3 - 6579706 tgt i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14799958 106 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 20726 88 + 69927 I e micMur3.chr1 88394568 1539 + 114275543 I e cebCap1.NW_016107444v1 6383271 48 + 6778120 I a score=738017.000000 s hg38.chr3_KI270934v1_alt 69919 120 + 163458 TTCCCCATGG-----------AAGTAAAAACCCTTAAAAGACGAGAAAGGCCTATGATTGTGCCTTTCGGG--GTAGCTGGGTGGATTG-AGGCGGGGGAACCTCCAGAGACAGGGTGGGCAGTG-CTGCTGCCA s panTro5.chr3 2542163 117 - 202621043 TTCCCCATGG-----------AAGTAAAACCCTTTAAAAGATAGGAAAGGCCTATGATTTTGCCTTTCGTGTGGTAGCTGGGTGGATTG-AGG---GGGGACCTCCAGAGACGGGG--GGCAGTG-CTCTTGCCA i panTro5.chr3 T 94341 C 0 s panPan2.chrUn_NW_014024201v1 131972 119 - 190779 TTCCCCATGG-----------AAGTAAAA-CCCTTAAAAGATGAGAAAGGCCTATGATTTTGCCTTTCGGG--GTAGCTGGGTGGATTG-AGGGGGGGGAACCTCCAGAGACAGGGTGGGCAGTG-CTGCTGCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 82928 120 - 106623 TTCCCCATGG-----------AAGTAAAAACCCTTAAAAGACGAGAAAGGCCTATGATTTTGCCTTTCAGG--GTAGCTGGGTGGATTG-AGGCGGGGGAACCTCCAGAGACAGGGTGGGCAGTG-CTGCTGCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946461 119 - 123690457 TTCCCCATGG-----------AAGTAAAAACCCTTAAAAGACGAGAAAGGCCTATGATT-TGCCTTTCGGG--GTAGCTGGGTGGATTG-AGGGGGAGGAACCTCCAGCGACAGGGTGGGCAGTG-CTGCTGCCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354648 107 - 204787373 CTCCCCACGG-----------AAGTCAAAACCCTTCAAAGATGAGAAAG------------GCCTTTCGGG--GTGGCTGGGTGGACCG-AAG-GGAGGAACCTCCAGAGACAGGGTGGGCAGTG-CTGCTGCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419831 107 - 192460366 CTCCCGACGG-----------AAGTCAAAACCCTTCAAAGATGAGAAAG------------GCCTTTCGGG--GTGGCTGGGTGGACCG-AAG-GGAGGAACCTCCAGAGACAGGGTGGGCAGTG-CTGCTGCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159393 107 - 19675229 CTCCCCACGG-----------AAGTCAAAACCCTTCAAAGAAGAGAAAG------------GCCTTTCGGG--GTGGCTGGGTGGACCG-AAG-GGAGGAACCTCCAGAGACAGGGTGGGCAGTG-CTGCTGCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397210 107 - 16847902 CTCCCCACGG-----------AAGTCAAAACCCTTCAAAGATGAGAAAG------------GCCTTTCGGG--GTGGCTGGGTGGACCG-AAG-GGAGGAGCCTCCAGAGACAGGGTGGGCAGTG-CTGCTGCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366146 107 + 91754291 TTCCCCACGG-----------AAGTCAAAACCCTTCAAAGATGAGACAG------------GCCTTTCGGG--GTAGCAGGGTGGACCG-AAG-GGAGGAACCTCCAAAGACAGGGTGGGCAGTG-CTGCTGCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435515 107 + 1977891 CTCCCCACGG-----------AAGTCAAAACCCTTCAGAGATGAGAAAG------------GCCTTTCGGG--GTGGCTGGGTGGACCG-AAG-GGAGGAGCCTCCAGAGACAGGGTGGGCAGTG-CTGCTGCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7372073 119 - 7796314 TTCCCCATGG-----------AAGTCAAAACCCTTAAAAGATGAGAAAGGCCTATGGTTCTGCCTTTCGGG--GTGGCTGGGTGGACTG-AAG-GGAGGAACCTCCAGAGACAGGGTGGGCAGTG-CTGCTGCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849839 63 + 74750902 TTCCCCATGG-----------AAG-------------------------------------------CAGA--GTGAC-------------GG-GGAGGAGCCGCCAGAGGCAGGGTGGGGAGCG-CTGCT-CAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17293092 41 - 17725628 CTCCCCACGG-----------AAG-------------------------------------------CAGA--GTGA--------------GG-GGAGGAGCCTCCAGAGGC----------------------- i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 14800064 119 - 22200726 TTCCCCATGG-----------AAGTAAAAACCCTTAAAATACAAGAAAGGCCTATGGTTTTGTCATTAGAG--GTAGCTGGGAGGACCG-GGG-AGAGGGAACTCCAGAGGCAGCGTGGGGAGTG-CTGCTGCCA i proCoq1.NW_012133858v1 I 106 I 1280 s otoGar3.GL873829 212296 131 + 608964 TTCCCTACAGTTATTAAAAAAAAAAAAAAACTCTTGAAATACAAGAAAGGCCTATGGTTTTTTTTTTAGAG--GTAGCTGGGAGGATTGAGGA-AGAGGAACCTCCAGAGACAGTGTTGGTGGTA-CTGCTACCA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2327689 107 - 31377067 TTCCCCACGG-----------AAGTAAAAACCCTTCAAATACAGGAAACATCTGTGGTTTTGTACTTAGAG--GTAGCTGGGAGGAGTA-GGGGAGAGGCAGCTACCCAGACCGAGCAGGT-------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2707673 119 - 6579706 ttcccgatgg-----------aaatgaaaaccactaaaacataagaaag--ccttggttttatctttagag--gttttggggaggactg-ggggagaggacgccctggagacagtacaggtggtgACTGCTTCAA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 20726 88 + 69927 I e micMur3.chr1 88394568 1539 + 114275543 I e cebCap1.NW_016107444v1 6383271 48 + 6778120 I a score=46328.000000 s hg38.chr3_KI270934v1_alt 70039 7 + 163458 AAGCGAG s panTro5.chr3 2542280 7 - 202621043 AAGCAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132091 7 - 190779 AAGCGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 83048 7 - 106623 AAGCGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946580 7 - 123690457 AAGCGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354755 7 - 204787373 AAGCGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419938 7 - 192460366 AAGCGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159500 7 - 19675229 AAGCGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397317 7 - 16847902 AAGCGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366253 7 + 91754291 AAGCGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435622 7 + 1977891 AAGCGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7372192 7 - 7796314 AAGTGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849902 7 + 74750902 AAGCCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17293133 6 - 17725628 -AGCCAC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 212427 7 + 608964 AAGCGAG i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 2327796 1 - 31377067 --G---- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2707792 7 - 6579706 AAGGGGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14800183 1280 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 20726 88 + 69927 I e micMur3.chr1 88394568 1539 + 114275543 I e cebCap1.NW_016107444v1 6383271 48 + 6778120 I a score=53707.000000 s hg38.chr3_KI270934v1_alt 70046 7 + 163458 GG---AGCCG s panTro5.chr3 2542287 7 - 202621043 GG---AGCCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132098 7 - 190779 GG---AGCCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 83055 7 - 106623 GG---AGCTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946587 7 - 123690457 GG---AGCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354762 7 - 204787373 GG---GGCCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419945 7 - 192460366 GG---GGCCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159507 7 - 19675229 GG---GGCCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397324 7 - 16847902 GG---GGCCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366260 7 + 91754291 GG---GGCCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435629 7 + 1977891 GG---GGCCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7372199 7 - 7796314 GG---AGCCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849909 10 + 74750902 AGAGCAGCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17293139 7 - 17725628 GG---AGCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6383319 7 + 6778120 GG---AGCAG i cebCap1.NW_016107444v1 I 48 C 0 s otoGar3.GL873829 212435 7 + 608964 GG---AGTGG i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 2327797 7 - 31377067 GG---AGCAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2707799 8 - 6579706 --GACAGCAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14800183 1280 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 20726 88 + 69927 I e micMur3.chr1 88394568 1539 + 114275543 I a score=397860.000000 s hg38.chr3_KI270934v1_alt 70053 43 + 163458 GCAGAGTCCTT---GGGGCTCCGGCAAGGGAAAGACG-GCACCCCCC s panTro5.chr3 2542294 46 - 202621043 GCAGAGTCCTATGAGAGGCTCCGGCAAGGGAAAGAGG-GCCACCCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132105 43 - 190779 GCAGAGTCCTT---GGGGCTCCGGCAAGGGAAAGAGG-GCACCCCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 83062 43 - 106623 GCAGAGTCCTT---GGGGCCCCGGCAAGGGAAAGAGG-GCACCCCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946594 43 - 123690457 GCAGAGTCCTT---GGGGCTCTGGCAAGGGAAAGAGG-GCGCTCGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354769 41 - 204787373 GCAGAGTCCTT---GGGGCTCCGGCAAGGGAAACAGG-GTGCCCC-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419952 41 - 192460366 GCAGAGTCCTT---GGGGCTCCGGCAAGGGAAACAGG-GTGCCCC-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159514 41 - 19675229 GCAGAGTCCTT---GGGGCTCCGGCAAGGGAAACAGG-GTGCCCC-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397331 41 - 16847902 GCAGAGTCCTT---GGGGCTCCGGCAAGGGAAACAGG-GCGCCCC-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366267 41 + 91754291 GCAGAGTCCTT---GGGGCTCTGGCAAGGGAAACAGG-GCGCCCC-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1435636 41 + 1977891 GCAGAGTCCTT---GGGGCTCCGGCAAGGGAAACAGG-GCGCCCC-- i manLeu1.NW_012102020v1 C 0 I 830 s colAng1.NW_012118932v1 7372206 41 - 7796314 GCAGAGTCCTT---GGGGCTCCGGCAAGGGAAACAGG-GTGCCCC-- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849919 43 + 74750902 GCAGAGTCTTT---GAGGCTCCGGCAAGTGAATCAGA-GCACTCTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17293146 43 - 17725628 GCAGGGTCCTT---GGGGCTCCAGCAAGGGAAGCAGA-GCCCTCCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6383326 43 + 6778120 ACAGAGTCCTT---GGGGCTCCAGCAAGGGAAGCAGA-GCGCTCCCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 20814 43 + 69927 GCAGAGTCCTT---CGGGCTCCAGCAAGGGAAACAGA-GCGCTCCCC i aotNan1.NW_018503669v1 I 88 C 0 s otoGar3.GL873829 212442 43 + 608964 GCAGAGGCCTT---GGGGCCCCAACAAAGGAAAGGAG-AGACTTCTC i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 2327804 29 - 31377067 ------------GCGAGTCTGGGGGAAGGG---CCAA-GCTTCCC-- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2707807 44 - 6579706 GCAGAGCCCTT---GGGGCTCTAGCATGGCAAAGAGGAGCACTACAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14800183 1280 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e micMur3.chr1 88394568 1539 + 114275543 I a score=76038.000000 s hg38.chr3_KI270934v1_alt 70096 12 + 163458 -ACCCTGCCGAGG s panTro5.chr3 2542340 12 - 202621043 -ACCCTGCGAGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132148 11 - 190779 -A-CCTGCCGAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 83105 12 - 106623 -ACCCTGCCGAGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946637 12 - 123690457 -ACCCTGCCGAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354810 12 - 204787373 -ACCCTGCCAAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192419993 12 - 192460366 -ACCCTGCCAAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159555 12 - 19675229 -ACCCTGCCAAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397372 12 - 16847902 -ACCCTGCCAAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366308 12 + 91754291 -ACCCTGCCAAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1436507 12 + 1977891 -ACCCTGCCAAGG i manLeu1.NW_012102020v1 I 830 C 0 s colAng1.NW_012118932v1 7372247 12 - 7796314 -ACCCTGCCAAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849962 8 + 74750902 -GCCCTGCC---- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17293189 4 - 17725628 -GCCC-------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6383369 12 + 6778120 -GCCCTGCCGAGG i cebCap1.NW_016107444v1 C 0 I 407 s aotNan1.NW_018503669v1 20857 12 + 69927 -GCCCTGCCGAGG i aotNan1.NW_018503669v1 C 0 I 395 s otoGar3.GL873829 212486 12 + 608964 -GCCCTGTGCAGA i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 2327834 6 - 31377067 -GCGCTG------ i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2707851 13 - 6579706 GCCCCTGTTCACC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14800183 1280 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e micMur3.chr1 88394568 1539 + 114275543 I a score=717220.000000 s hg38.chr3_KI270934v1_alt 70108 110 + 163458 CCCCTCCTGA-ATGAG-GG-----CCGAGAACTGCAGGGTTGGAGCCTGGGAACCATGGAAAC-CGTG-GCCAGGCATTTTCCACAGGACAC-------CGGGAGCC-CCTG--------AGGCAACACCTAGCT s panTro5.chr3 2542352 109 - 202621043 CCCCTCCTGAGATGAG-G------CTGGAAACTGCAGG-TTGGAGCCTGG-AACCATGGAAAC-CGTG-GCCAGGCATTTTCCACAGGACAC-------CGGGTGCCAGCTG--------AGGCAAAAACCAGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132159 111 - 190779 CCCCTCCTGA-ATGAG-GG-----CTGAGAACTGCAGGGTTGGAGCCTGGGAACCATGGAAAC-CGTG-GCCAGGCATTTTCCACAGGACAC-------CGGGAGCCAGCTG--------AGGCAACACCTAGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 83117 111 - 106623 CCCCTCCTGA-ATGAG-GG-----CTGAGAACTGCAGGGTTGGAGCCTGGGAACCATAGAAAC-CGTG-GCCAGGCATTTTCCACGGGACAC-------CGGGAGCCAGCTG--------AGGCAACACCTAGCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946649 111 - 123690457 CCCCTCCTGA-ATGAG-GG-----CTGAGGACTGCAGGGTTGGAGCCTGGGAACCACAGAAAC-TGTG-GCCAGGCATTTTCCACAGGACAC-------AGGGAGCCAGCTC--------AGGAAAAACCTAGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354822 110 - 204787373 CCCCTCCTGA-ATGAG-G------CTGAGAACTGCAGGGTTGGAGCCCGGGAACCACAGAAAC-TGTG-GCCAGGCATTTTCCACAGGACAC-------AGGGAGCCAGCTC--------AGGCAAAACCTAGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192420005 110 - 192460366 CCCCTCCTGA-ATGAG-G------CTGAGAACTGCAGGGTTGGAGCCCGGGAACCACAGAAAC-TGTG-GCCAGGCATTTTCCACAGGACAC-------AGGGAGCCAGCTC--------AGGCAAAACCTAGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159567 110 - 19675229 CCCCTCCTGA-ATGAG-G------CTGAGAACTGCAGGGTTGGAGCCCGGGAACCACAGAAAC-TGTG-GCCAGGCATTTTCCACAGGACAC-------AGGGAGCCAGCTC--------AGGCAAAACCTAGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397384 110 - 16847902 CCCCTCCTGA-ATGAG-G------CTGAGAACTGCAGGGTTGGAGCCCGGGAACCACAGAAAC-TGTG-GCCAGGCATTTTCCACAGGACAC-------AGGGAGCCAGCTC--------AGGCAAAACCTAGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366320 110 + 91754291 CCCCTCCTGA-ATGAG-G------CTGAGAACTGCAGGGTTGGAGCCCGGGAACCACAGAAAC-AGTG-GCCAGGCATTTTCCACAGGACAC-------AGGGAGCCAGCTC--------AGGTAAAACCTAGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1436519 110 + 1977891 CCCCTCCTGA-ATGAG-G------CTGAGAACTGCAGGGTTGGAGCCCGGGAACCACAGAAAC-TGTG-GCCAGGCATTTTCCACAGGACAC-------AGGGAGCCAGCTC--------AGGCAAAACCTAGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7372259 111 - 7796314 CCCCTCCTGA-ACGAGAG------CTGAGAACTGCAGGGTTGGAGCCCAGGAACCATAGAAAC-TGTG-GCCAGGCATTTTCCACAGGACAC-------AGGCAGCCAGCTC--------AGACAAAACCTAGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73849970 95 + 74750902 --------------GG-G------CCAAGAACCACAGGGCGGGAGCAGGAGAGCCACAGAAAC---TG-GCCAGGCATTTCCCACATGACAC-------ACGGAGCCAGCTC--------AGGCAAAACCTAACT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17293193 77 - 17725628 ---------------G-G------CCGAGGGCC---------------GAGAACCACAGAAAC---TG-GCCAGGCATTTCCCACACG--AC-------ACGGGGCCAGCTC--------AGGCAAAACCTAACt i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 212498 111 + 608964 -CCTCTGTGA-CTGTG-GGT----CTAAGAGCCACAGGGATGGAAACCTGGGACCACAGAAACGAGGG-ACCAGGCACCCTCCACATGTAAC-------A-GGAGCCAGATG--------AGACAAAACCTAACA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2327840 97 - 31377067 -------------------CTCGCCCGA-----------------CCCCAGGGCCGCAGGAAC-AGGG-CCCAGCCACGTGCCACGGGTAACGGAGCCGAGGGACGCAGCCCTGTCCACTTGACAGACCCTTGGA i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 2707864 104 - 6579706 TTGCTCCTGA-ATGTG-GGC----CTGGGAA----------GGAACCGCAGAGCTACAGAAAC-AATGTACCAGGCTACAAAAACAATGTAC------CAGGGATCCAGATG--------AGGAAACACTTAACC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14800183 1280 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 20869 395 + 69927 I e micMur3.chr1 88394568 1539 + 114275543 I e cebCap1.NW_016107444v1 6383381 407 + 6778120 I a score=32680.000000 s hg38.chr3_KI270934v1_alt 70218 5 + 163458 TT-TCA- s panTro5.chr3 2542461 6 - 202621043 TTGTCA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132270 5 - 190779 TT-TCA- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 83228 5 - 106623 TT-TCA- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946760 5 - 123690457 TT-CCA- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354932 5 - 204787373 TT-TCA- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192420115 5 - 192460366 TT-TCA- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159677 5 - 19675229 TT-TCA- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397494 5 - 16847902 TT-TCA- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366430 5 + 91754291 TT-TCA- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1436629 5 + 1977891 TT-TCA- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7372370 5 - 7796314 TT-TCA- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73850065 5 + 74750902 TT-TCA- i calJac3.chr17 C 0 I 332 s saiBol1.JH378146 17293270 5 - 17725628 tt-tca- i saiBol1.JH378146 C 0 I 317 s aotNan1.NW_018503669v1 21264 5 + 69927 TT-TCA- i aotNan1.NW_018503669v1 I 395 C 0 s otoGar3.GL873829 212609 3 + 608964 TT-T--- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2327940 4 - 31377067 -T-GTA- i canFam3.chr33 I 3 I 1 s dasNov3.JH569502 2707968 6 - 6579706 TT-TCTA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14800183 1280 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e micMur3.chr1 88394568 1539 + 114275543 I e cebCap1.NW_016107444v1 6383381 407 + 6778120 I a score=60995.000000 s hg38.chr3_KI270934v1_alt 70223 6 + 163458 GAGAGC s panTro5.chr3 2542467 6 - 202621043 GAGAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132275 6 - 190779 GAGAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 83233 6 - 106623 GAGAGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946765 6 - 123690457 GAGAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354937 6 - 204787373 GAGAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192420120 6 - 192460366 GAGAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159682 6 - 19675229 GAGAGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397499 6 - 16847902 GAGAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366435 6 + 91754291 GAGAGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1436634 6 + 1977891 GAGAGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7372375 6 - 7796314 GAGAGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73850402 6 + 74750902 GAAAGG i calJac3.chr17 I 332 C 0 s saiBol1.JH378146 17293592 6 - 17725628 GAAAGG i saiBol1.JH378146 I 317 C 0 s aotNan1.NW_018503669v1 21269 6 + 69927 GAAAGG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 212612 6 + 608964 GAGAGA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2327945 6 - 31377067 GAGTGC i canFam3.chr33 I 1 I 2 s dasNov3.JH569502 2707974 6 - 6579706 GCGAGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14800183 1280 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e micMur3.chr1 88394568 1539 + 114275543 I e cebCap1.NW_016107444v1 6383381 407 + 6778120 I a score=217942.000000 s hg38.chr3_KI270934v1_alt 70229 21 + 163458 GGCTG-CCGGCAC-TT-CT-GCCCA s panTro5.chr3 2542473 23 - 202621043 GGCTG-CCGGCACATT-CTTGCCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132281 21 - 190779 GGCTG-CCGGCAC-TT-CT-GCCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 83239 21 - 106623 GGCTG-CCGGCAC-TT-CT-GCCTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946771 21 - 123690457 GGCTG-CTGGCAC-TT-CT-GCCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354943 21 - 204787373 GGCTG-CTGGCAC-TT-CT-GCCTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192420126 21 - 192460366 GGCTG-CTGGCAC-TT-CT-GCCTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159688 21 - 19675229 GGCTG-CTGGCAC-TT-CT-GCCTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397505 21 - 16847902 GGCTG-CTGGCAC-TT-CT-GCCTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366441 20 + 91754291 GGCTG--TGGCAC-TT-CT-GCCTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1436640 21 + 1977891 GGCTG-CTGGCAC-TT-CT-GCCTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7372381 21 - 7796314 GGCTG-CTGCCAC-TT-CT-GCCTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73850408 21 + 74750902 GGCTC-CTGGCGC-TT-CT-GCCTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17293598 21 - 17725628 GGCTG-CTGGCAC-TT-CT-GCCTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6383788 21 + 6778120 GGCTG-CTGGCAC-TT-CT-GCCTA i cebCap1.NW_016107444v1 I 407 C 0 s aotNan1.NW_018503669v1 21275 21 + 69927 GGCTG-CTGGCAC-TT-CT-GCCTA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 212618 11 + 608964 GGCTG---------CC-CC-AC--- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2327953 23 - 31377067 GGCTGGGTGGCAC-TCGCT-GCCCA i canFam3.chr33 I 2 I 219 s dasNov3.JH569502 2707980 21 - 6579706 AGCTG-CTAGAAC-TT-CT-CCATA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14800183 1280 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e micMur3.chr1 88394568 1539 + 114275543 I a score=351665.000000 s hg38.chr3_KI270934v1_alt 70250 35 + 163458 GAGCAGAGGCCTGTTC-CCTTGACTGG-CC-CTGAGGT s panTro5.chr3 2542496 37 - 202621043 GAGCAGAGGCCTGTTTGCCTTGACTGGGCC-CTGAGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132302 35 - 190779 GAGCAGAGGCCTGTTC-CCTTGACTGG-CC-CTGAGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 83260 35 - 106623 GAGCAGAGGCCTGTTC-CCTTGACTGG-CC-CTGAGGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946792 35 - 123690457 GAGCAGAGGGCTGCTC-CCTTGCCTGG-CC-CTGAGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354964 35 - 204787373 GAGCAGAGGCCTGTTC-CCTTGACTGG-CC-CTGAGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192420147 35 - 192460366 GAGCAGAGGCCTGTTC-CCTTGACTGG-CC-CTGAGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159709 35 - 19675229 GAGCAGAGGCCTGCTC-CCTTGACTGG-CC-CTGAGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397526 35 - 16847902 GAGCAGAGGCCTGTTC-CCTTGACTGG-CC-CTGAGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366461 35 + 91754291 GAGCAGAGGCCTGTTC-CCTTGACTGG-CC-CGGAGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1436661 35 + 1977891 GAGCAGAGGCCTATTC-CCTTGACTGG-CC-CTGAGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7372402 35 - 7796314 GAGCAGAGGCCTGTTC-CCTTGACTGG-CC-CTGAGGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73850429 35 + 74750902 GAGCAGAGGCCTGTTT-CTTTAACTGG-CC-TGGAGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17293619 35 - 17725628 GAGCAGAGGCCTGTTC-CCTTAACTGG-CC-CTCAGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6383809 35 + 6778120 GAACAGAGGCCTGTCC-CCTTAACTGG-CC-CTCAGGT i cebCap1.NW_016107444v1 C 0 I 28 s aotNan1.NW_018503669v1 21296 35 + 69927 GAGCAGAGGCCTGTTC-CCTTAACTGG-CC-CTGAGGT i aotNan1.NW_018503669v1 C 0 I 28 s otoGar3.GL873829 212629 28 + 608964 --------GCCTGCTC-ATTGGACTGG-CCGCTGAGGC i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2708001 30 - 6579706 AGGCAGA-ACTTCTCT-Gcttagttgt----gtgag-- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14800183 1280 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e micMur3.chr1 88394568 1539 + 114275543 I e canFam3.chr33 2327976 219 - 31377067 I a score=43017.000000 s hg38.chr3_KI270934v1_alt 70285 14 + 163458 GGGAGGAAT--GGGAG s panTro5.chr3 2542533 12 - 202621043 GG-AGGAAT--GGGA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132337 14 - 190779 GGGAGGAAT--GGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 83295 14 - 106623 GGGAGGAAT--GGGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946827 13 - 123690457 GGGAGGAAT--GGGG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2354999 13 - 204787373 GGGAGGAAC--GGGG- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192420182 13 - 192460366 GGGAGGAAC--GGGG- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159744 13 - 19675229 GGGAGGAAC--GGGG- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397561 13 - 16847902 GGGAGGAAC--GGGG- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366496 15 + 91754291 GGGAGGAACGGGGGG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1436696 13 + 1977891 GGGAGGAAC--GGGG- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7372437 14 - 7796314 GGGAGGAAT-GGGGG- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73850464 13 + 74750902 CATAGGAAC--AGAG- i calJac3.chr17 C 0 T 385 s saiBol1.JH378146 17293654 13 - 17725628 CACAGGAAT--GGAG- i saiBol1.JH378146 C 0 T 388 s otoGar3.GL873829 212657 13 + 608964 AGGGTGTGT--GGAG- i otoGar3.GL873829 C 0 I 1 s dasNov3.JH569502 2708031 7 - 6579706 tagagga--------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14800183 1280 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88394568 1539 + 114275543 I e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2327976 219 - 31377067 I a score=99838.000000 s hg38.chr3_KI270934v1_alt 70299 22 + 163458 TCCCCG--AGGGAGGCTACGGTAG s panTro5.chr3 2542545 23 - 202621043 TCCTTGTGAGGGAGGCT-CGGTAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132351 22 - 190779 TCCCCG--AGGGAGGCTACGGTAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 83309 21 - 106623 GCCCCG--AGGGAGGCTACGGT-G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946840 22 - 123690457 GCCCCG--AGGGAGGCTACGGTAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2355012 22 - 204787373 GCCCCG--AGGGAGGCCACGGTAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192420195 22 - 192460366 GCCCCG--AGGGAGGCCACGGTAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159757 22 - 19675229 GCCCCG--AGGGAGGCCACGGTAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397574 22 - 16847902 GCCCCG--AGGGAGGCCACAGTAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366511 22 + 91754291 GCCCCG--AGGGAGGCCACAGTAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1436709 22 + 1977891 GCCCCG--AGGGAGGCCACGGTAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7372451 22 - 7796314 GCCCCG--AGGGAGGCTGAGGCAG i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 212671 16 + 608964 GCCCTG--AAGG------CAATAG i otoGar3.GL873829 I 1 C 0 s dasNov3.JH569502 2708038 10 - 6579706 --ccag--tgggca---------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14800183 1280 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88394568 1539 + 114275543 I e saiBol1.JH378146 17293667 388 - 17725628 T e calJac3.chr17 73850477 385 + 74750902 T e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2327976 219 - 31377067 I a score=509934.000000 s hg38.chr3_KI270934v1_alt 70321 102 + 163458 GAtatcttccctagag-acagggtcttgctctgttgcccaggcaggtcttgaatt-cctg--ggctcaagcgatcctcctg-cctcagcctcttgagtagtttacta s panTro5.chr3 2542568 105 - 202621043 GATAtttttcccagaggacagggtcttgctct--tgcccaggcaggtcttgaatttcctgccggctcaaccgatcctcctgtcctcagcctcttgagtaggttacta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132373 102 - 190779 GATAttttccccagag-acagggtcttgctctgttgcccaggcaggtcttgaatt-cctg--ggctcaagcgatccttctg-cctcagcctcttgagtagtttacta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 83330 102 - 106623 GAtatcttccccagag-acagggtcttgctctgttgcccaggcaggtcttgaatt-cctg--ggctcaagcgatcctcctg-cctcagcctcttgagtagtttacta i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946862 102 - 123690457 GATACtttccccagag-acagggtcttgctctgttgcccaggcaggccttgaatt-cctg--ggctgaagcgaccctcctg-cctcagcctcTTGCGTAGTTCACTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2355034 102 - 204787373 GATAttttccccagag-acaggatcttgctttgttgcccaggcaggtcttgaatt-cctg--ggctcaagtgatcctcctg-ccccagcctctggagtagttTACTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192420217 102 - 192460366 GATAttttccccagag-acaggatcttgctttgttgcccaggcaggtcttgaatt-cctg--ggctcaagtgatcctcctg-ccccagcctctggagtagttTACTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159779 102 - 19675229 GATAttttccccagag-acaggatcttgctttgttgcccaggcaggtcttgaatt-cctg--ggctcaagtgatcctcctg-ccccagcctcttgagtagttTACTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397596 101 - 16847902 GATAtttt-cccagag-acaggatcttgctttgttgcccaggcaggtctcgaatt-cctg--ggctcaagtgatcctcctg-ccccagcctcttgagtagttTACTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366533 102 + 91754291 GATAttttccccagtg-acaggatcttgctctgttgcccaggcaggtcttgaatt-cctg--ggctcaagtgatcctcctg-ccccagcctgttgagtagttTACTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1436731 102 + 1977891 GATAttttccccagag-acaggatcttgctttgttgcccaggcaggtcttgaatt-cctg--ggctcaagtgatcctcctg-ccccagcctcttgagtagttTACTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7372473 102 - 7796314 GAtattttccccagag-acaggatctcactctgttgcccaggcaggtcttgaatt-cctg--ggctcaagtggtcctcctg-cctcagcctcTTGAGTGGTTCACTG i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 2708048 25 - 6579706 --ttcattacccaggg-ggaggttatag------------------------------------------------------------------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14800183 1280 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88394568 1539 + 114275543 I e saiBol1.JH378146 17293667 388 - 17725628 T e calJac3.chr17 73850477 385 + 74750902 T e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2327976 219 - 31377067 I e otoGar3.GL873829 212687 0 + 608964 C a score=1000170.000000 s hg38.chr3_KI270934v1_alt 70423 169 + 163458 caagATCTTTTCTGGCCTGAGAAAGGGG-----GCCTCCCC-T-------GTC---TAGAGGGA-----------------------------GATCGGGCTCTCCCT-GTGAGTGG-GCCAA-GGAGCCTCTT---GGAGagggtttctagatttagcaaataaaaata-cag-ggtactcggttaaatttgaactcgcagttcagataaatg---------acgaataa s panTro5.chr3 2542673 200 - 202621043 caagATCTTTTCTGGGCTGAGAAAGGGG-----GCCTCCCCCT-------GTC---TAGGAGGGTGAAAGACTCAATAGTCTTTACCCTTTATGATCTGCCTCTCCCTAGTGAGTGGAGCCAAAGGAGCCTCTT---TGAGagggtt-ctaa--ttagcaaataaaaataacagcggtattctgttaaatttgaatt-gcatttctgataaacg---------acgaataa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132475 169 - 190779 caagATCTTTTCTGGCCTGAGAAAGGGG-----GCCTCCCC-T-------GTC---CAGAGGGA-----------------------------GATCGGGCTCTCCCT-GTGAGTGG-GCCAA-GGAGCCTCTT---GGAGagggtttctagatttagcaaataaaaata-cag-ggtactcggttaaatttgaacttgcatttcagataaacg---------acgaataa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 83432 169 - 106623 caagATCTTTTCTGGCCTGAGAAAGGGG-----GCCTCCCC-T-------GTC---TAGAGGGA-----------------------------GATCGGGCTCTCCCT-GTGAGTGG-GCCAA-GGAGCCTCTT---GGAGagggtttctagatttagcaaataaaaata-cag-ggcactcggttaaatttgaacttgcatttcagataaacg---------atgaataa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2946964 168 - 123690457 CAAGATCTTTTCTGGCCTGAGAAA-GGG-----GCCTCCCC-T-------GTC---TAGAGGGA-----------------------------GATGGGGCTCTCCCT-GTGAGTAG-GCCAA-GGAGCCTCTT---GGAGagagtttctagatttagcaaataaaaata-cag-ggtactcggttaaatttgaacttgcatttcagataaatg---------acgaataa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2355136 180 - 204787373 CAAGATCTTTTCTGGCCTGAGAAAGGGGGG---GCCTCTCC-T-------GCC---TGCAGGGA-----------------------------GATCGGGCTCTCCCT-GGGAGTGG-GCCAA-GGAGCCTCTT---GGAGagggtttctagatttagcaaataaaaata-tag-ggtactcagttaaatttgaacttgcatttcagataaatgcaagtttatctgaataa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192420319 180 - 192460366 CAAGATCTTTTCTGGCCTGAGGAAGGGGGG---GCCTCTCC-T-------GCC---TGCAGGGA-----------------------------GATCGGGCTCTCCCT-GGGAGTGG-GCCAA-GGAGCCTCTT---GGAGagggtttctagatttagcaaataaaaata-tag-ggtactcagttaaatttgaacttgcatttcagataaatgcaagtttatctgaataa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19159881 181 - 19675229 CAAGATCTTTTCTGGCCTGAGAAAGGGGGGG-TGCCTCTCC-T-------GTC---TGCAGGGA-----------------------------GATGGGGCTCTCCCT-GAGAGT-G-GCCAA-GGAGCCTCTT---GGAGagggtttctagatttagcaaataaaaata-tag-ggtactcagttaaatttgaacttgcatttcagataaatgcaagtttatctgaataa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397697 182 - 16847902 CAAGATCTTTTCTGGCCTGAGAAAGGGGGGG-TGCCTCTCC-T-------GTC---TACAGGGA-----------------------------GATCGGGCTCTCCCT-GGGAGTGG-GCCAC-GGAGCCTCTT---GGAGagggtttctagatttagcaaataaaaata-tag-ggtactcagttaaatttgaacttgcatttcagataaatgcaagtttatctgaataa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366635 181 + 91754291 CAAGATCTTTTCTGGCCTGAGAAAGGGGGGG-TGCCTCTCC-T-------GTC---TAGAGGGA-----------------------------GATCGGGCTCT-CCT-GTGAGTAG-GCCAA-GGAGCCTCTT---GGAGagggtttctagatttagcaaataaaaata-tag-ggtactcagttaaatttgaacttgcatttcagataaatgcaagtttatctgaataa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1436833 182 + 1977891 CAAGATCTTTTCTGGCCTGAGAAAGGGGGGG-TGCCTCTCC-T-------GTC---TAGAGGGA-----------------------------GATCGGGCTCTCCCT-GGGAGTGG-GCCAA-GGAGCCTCTT---GGAGagggtttctagatttagcaaataaaaata-tag-ggtactcagttaaatttgaacttgcatttcagataaatgcaagtttatctgaataa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7372575 173 - 7796314 CAAGATCTTTTCTGGCCTGAGAAAGAGGGGGATGCCTCTCC-T-------GTC---TAGAGAGA-----------------------------GATCGGGCTCC-CCT-GTGAGGAG-GCCAA-GGAGCCTCTT---GAAGagggcttctagatttgacaaataaaaata-cag-ggtactcagttaaatttgaacttgcatttcagataaatg---------atgagtaa i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 212687 170 + 608964 CCAGATCTTTTATGGCCTGACAGAGGGT-----GCTTCT---T-------TTC---TATAGGGT-----------------------------GGTAGGGCTCTCTCT-GTGAGTAG-GCCAA-GGAGCCTCTTAGGGAGGagggttgtctgatgtagcaagtaaaagta-cag-gacacccagttaaatttgaatttacctttcagataaaca---------atgaataa i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2708073 173 - 6579706 cagaatccttaatagcctgacaaaggga-----gcttctcc-taagacaggcctagtagaggga-----------------------------gagggaagccactct-gtaagtgg-gccaa-ggagtctttt---gCACaaagctgatagatttatcagatgaaaata-cag-aatatccagttaacgttgaa------tttcagataatca---------atgaataa i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14800183 1280 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88394568 1539 + 114275543 I e saiBol1.JH378146 17293667 388 - 17725628 T e calJac3.chr17 73850477 385 + 74750902 T e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2327976 219 - 31377067 I a score=1972411.000000 s hg38.chr3_KI270934v1_alt 70592 336 + 163458 ctttttagcatgagtatttctcatgcaatattggctacgtacttacact-ta---------aaaaaaaattgttacctgaaattcaaatgtaactggatgccc--tgtgttttatctggtaatcccaGTCTTGGAAGGAAAAGGATCAA-A-TACGAACCCCCTAA-TTCTCTGAGCCTTCTTGGTGCAGCCCACACAGCTGGAAGCCC-AAAGGTGGCGCTCTTGGAGTCTGACCTCCCCTGGCACAGGGTTTGAGATGGTCTTTACCCGGCTCCACTGGCCCAAAAGTAGCTCATAGA-CCCAAAAGAG-----GCCTAGCACC------TCT-CCCCAGGACGTCAGGATGGGGCTCCAGGT s panTro5.chr3 2542873 335 - 202621043 ctttttagcatgagtatttctcatgcaatattggctacatacttacact-ta---------aaaaaaa-ttgttacctgaaattcaaatgtaactggatgccc--tgtgttttatctggtaatcccaGTCTTGGAAGGAAAAGGATCAA-A-TACGAACCCCCTAA-TTCTCTGAGCCTTCTTGGTCCAGCCCACACAGCTGGAAGCCC-AAAGGTGGCGCTCTTGGAGTCTGACCTCCCCTGGCACAGGGTTTGAGATGGTCTTTACCCAGCTCCACTGGCCCAAAAGTAGCCCATAGA-CCCAAAAGAG-----GCCTAGCACC------TCT-CCCCAGGATGTCAGGATGGGGCCCCAGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132644 335 - 190779 ctttttagcatgagtatttctcatgcaatattggctacatacttacact-ta---------aaaaaaa-ttgttacctgaaattcaaatgtaactggatgccc--tgtgttttatctggtaatcccaGTCTTGGAAGG-AAAGGATCAA-A-TACGAACCCCCTAA-TTCTCTGAGCCTTCTTGGTCCAGCCCACACAGCTGGAAGCCC-AAAGGTGGCGCTCTTGGAGTCTGACCTCCCCTGGCACACGGTTTGAGATGGTCTTTACCCAGCTCCACTGGCCCAAAAGTAGCCCATAGA-CCCAAAAGAG-----GCCTAGCACC------TCTCCCCCAGGACGTCAGGATGGGGCCCCAGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 83601 336 - 106623 ctttttagcatgagtatttctcatgcaatattggctacgtacttacact-ta---------aaaaaaaattgttacctgaaattcaaatgtaactggatgccc--tgtgttttatctggtaatcccaGTCTTGGAAGGAAAAGGATCAA-A-TACAAACCCCCTAA-TTCTCTGAGCCTTCTTGGTCCAGCCCACACAGCTGGAAGCCC-GAAGGTGGCGCTCTTGGAGTCTGACCTCCCCTGGCACAGGGTTTGAGATGGTCTTTACCTGGCTCCACTGGTCCAAAAGTAGCCCATAGA-CCCAAAAGAG-----GCCTAGCACC------TCT-CCCCAGGGCGTCAGGATGGGGCCCCAGGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2947132 336 - 123690457 ctttttagcatgagtatttctcatgcaatattggctacatacttacact-ta---------aaaagaaattgttacctgaaattcaaatgtaactggatgccc--tgtattttatctggtaatcccaGTCTTGGAAGGAAAAGGATCAA-A-TACGAACCCCCTAA-TTCTCTGAGCCTTCTTGGTCCAGCCCACACAGCTGGAAGCCC-GAAGGTGGAGCTCTTGGAGTCTGACCTCTCCTGGCACACGGTTTGAGATGGTCTTTACCCGGCTCCACTGGTCCAAAAGTAGCCCATAGA-TCCAAAAGAG-----GCCTAGCACC------TCT-CCCCAGGGCGTCAGGATGGGGCCCCAGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2355316 343 - 204787373 ctttttagca----tatttctcatgcaatattggctacatacttacact-aacaacaacaacaaaaaaattgttacctgaaattcaaatgtaactggatgccc--tgtgttttatgtagtaatcccaGTCGTGGAAGGAAAAGGATCAA-A-TACAAACCCCCTCATTTCTCTGAGCCTTCTTGGTCCAGCCCACACAGCTAGAAGCCC-AAAGGTGGCACTCTTGGAGTCTGACCTCCCCTGGCACATGGTTTGAGATAGTCTTTACCCAGCTCCACTGGTCCAAAAGTAGCCCATAGACCCCCAAAGAG-----GCCTAGAACC------TCT-CCCCAGGGCATCAGGACGGGGCCCCAGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192420499 343 - 192460366 ctttttagca----tatttctcatgcaatattggctacatacttacact-aacaacaacaacaaaaaaattgttacctgaaattcaaatgtaactggatgccc--tgtgttttatgtagtaatcccaGTCGTGGAAGGAAAAGGATCAA-A-TACAAACCCCCTCATTTCTCTGAGCCTTCTTGGTCCAGCCCACACAGCTAGAAGCCC-AAAGGTGGCACTCTTGGAGTCTGACCTCCCCTGGCACATGGTTTGAGATAGTCTTTACCCAGCTCCACTGGTCCAAAAGTAGCCCATAGACCCCCAAAGAG-----GCCTAGAACC------TCT-CCCCAGGGCATCAGGACGGGGCCTCAGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19160062 344 - 19675229 ctttttagca----tatttctcatgcaatattggctacatacttacactaaaaaaaaaaaaaaaaaaaattgttacctgaaattcaaatgtaactggatgccc--tgtgttttatgtagtaatcccaGTCGTGGAAGGAAAAGGATCAA-A-TACAAACCCCCTCATTTCTCTGAGCCTTCTTGGTCCAGCCCACACAGCTAGAAGCCC-AAAGGTGGCACTCTTGGAGTCTGACCTCCCCTGGCACATGGTTTGAGATAGTCTTTACCCAGCTCCACTGGTCCAAAAGTAGCCCATAGACCCCCAAAGAG-----GCCTAGAACC------TCT-CCCCAGGGCATCAGGACGGGGCCCCAGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16397879 339 - 16847902 ctttttagca----tatttctcatgcaatattggctacatacttacact-aa----aaaaaaaaaaaaattgttacctgaaattcaaatgtaactggatgccc--tgtgttttatgtagtaatcccaGTCGTAGAAGGAAAAGGATCAA-A-TACAAACCCCCTCATTTCTCTGAGCCTTCTTGGTCCAGCCCACACAGCTAGAAGCCC-AAAGGTGGCACTCTTGGAGTCTGACCTCCCCTGGCACATGGCTTGAGATGGTCTTTACCCAGCTCCACTGGTCCAAAAGTAGCCCATAGACCCCCAAAGAG-----GCCTAGAACC------TCT-CCCCAGGGCGTCAGGATGGGGCCCCAGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91366816 339 + 91754291 ctttttagca----tatttctcatgcaatattggttacatacttacact-aa----aaaaaaaaaaaaattgttacctgaaattcaaatgtaactggattccc--tgtgttttacgtagtaatcccaGTCGTGGAAGGAAAAGGATCAA-A-TACAAACCCCCTCATTTCTCTGAGCCTTCTTGGTCCAGCCCACACAGCTAGGAGCAC-AAAGGTGGCACTCTTGGAGTCTGACCTCCCCTGGCACATGGTTTGAGATGGTCTTTACCCAGCTCCACTGGTCCAAAAGTAGCCCATAGACCCCCAAAGAG-----GCCTAGAACC------TCT-CCCCAGGGCGTCAGGATGGGGCCCCAGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1437015 339 + 1977891 ctttttagca----tatttctcatgcaatattggctacatacttacact-aa----aaaaaaaaaaaaattgttacctgaaattcaaatgtaactggatgccc--tgtgttttatgtagtaatcccaGTCGTGGAAGGAAAAGGATCAA-A-TACAAACCCCCTCATTTCTCTGAGCCTTCTTGGTCCAGGCCACACAGCTAGAAGCCC-AAAGGTGGCACTCTTGGAGTCTGACCTCCCCTGGCACATGGCTTGAGATAGTCTTTACCCAGCTCCACTGGTCCAAAAGTAGCCCATAGACCCCCAAAGAG-----GCCTAGAATC------TCT-CCCCAGGGCGTCAGGATGGGGCCCCAGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7372748 348 - 7796314 ctttttagcatgagtatttctcatgcaatatgggctacatacttacact-aa--aaaaaaaaaaaaaaattgttgcctgaaattcaaatgtgacgggatgccctgtgtgttttatgtagtaatcccaCTCTTGGAAGGAAAAGGATCAA-A-TACAAACCCCCTCATTTCTCTGAGCCTTCTGGGTCCAGCCCACACAGCTAGAAGCCCAAAAGGTGGCACTCTTGGAGCCTGACCTCCCCCGGCACATGGTTTGAGATAGTCTTGACCCAGCTCCACTGGTCCAAAAGTAGCCCATAGACCCCCAAGGAG-----GCCTAGAACC------TCT-CCCCAGGGCATCAGGATGGGGCCCCAGGT i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 212857 244 + 608964 tttttcattatgaatatttctcatgcaatatttgagaca----tacatt-ta----------aaaaaattcattacctgaaattcaaattcaactgga-------tgtG---------GTAACCCTACTCTTAGAAGGAAAAGGATCAA-A----AAAC-------------------------------------------GAGTCAC-CATTTTGGCATTCTG----------------------ATGCTTTGAGATGGTCTCTACTGAGCTCCGCCATCTCCAAAGTAGCCCACAGA-CCCCAATTAG-----GGTCAGGAG-----------CCCCAGAGTGTCAGGATGGA--CCCCAGT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2328195 236 - 31377067 ctctctgtcatgaata------------------------------aat-aa---------ataaaatattttta---aaaaTTCAAATGTAAGTGGATGTCC--CAGGTTTTATCCAGGAACCTTCCTCTTGGAAGGAAAAGAATCAA-AATATAAACCC------TCCTTT---------------------------TGGGGTTCC-A------------------------------------ATGGTTTGAGATGGTCGTTACTGAGGTCTACTGGCCCCAAAGTA-CCCAAGGA-CCCAACGGAA-----GTACGAGACCATGTGGTCA-CCTCTACCTGTCAGG-----GCCCCAGGT i canFam3.chr33 I 219 C 0 s dasNov3.JH569502 2708246 228 - 6579706 ttttttagggtaagtatgttccgttca---------------------t-tg-------------------tttTCCTAAAATTCTA--GTAACTGGGCATCC--TGTATTT---------ACCCTActcttgggaggaaggggatcaaga-tatgacctc------tcttttgggggtttctg---------------------------------------------------------------atggttcgagatggtcttttctgagattcattaatccaaaagtagcctcagga-cccaaaagtggagttgccaagaaac------ccagttccaggac------atggggctcaaggt i dasNov3.JH569502 C 0 I 8458 e proCoq1.NW_012133858v1 14800183 1280 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88394568 1539 + 114275543 I e saiBol1.JH378146 17293667 388 - 17725628 T e calJac3.chr17 73850477 385 + 74750902 T e cebCap1.NW_016107444v1 6383844 28 + 6778120 I a score=3320843.000000 s hg38.chr3_KI270934v1_alt 70928 585 + 163458 CCCCAGCTGGTTGTCCTGTGGACCTC-------AGGGAATGA----CGAGGCAGGAGTCAAGA-GCCTCGGTTGCAGCTCCCGCTGTGCCGCCCACGaccggctctggggtcagatgatctgctggttcaaatcctgactcagcctcctactagccaggccagtc---tctagacccctcccagcctccatgtcctcacctgagaaaacagggt----cacaatacctgccttgccaacgtggtgaggaccagcggagaagatgaaaggg------cttatattccaaag----cccacaagg------taagcATCCCT-CCCCATGGAGT---CCTCTCCCGGGCCCCT-GGAAAGCACGCATAGTCG-------ATTTGACTATAGTGAGGAGTGCGGGCTGCACC-CCCAGGCAGTATAGGCGAGTCCCGGGCACCCACTCTCATCCCTGGTCCAGTGCG---------------------------------GCCCAGCTGCACACACAAATCTCACCTTTGCAGGAACTGTTCGTCTGCCTTCATAATACAGTTTCTTCTCCCCACTTCAA-GCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-----------------------------------CAGCCCACACAGCTGGAAGCCC--AGAGTGGTGCCCTTGGAG-----CCCG-------ACTTCCCCTG------GCA s panTro5.chr3 2543208 585 - 202621043 CCCCAGCTGGTTGTCCTGTGGACCTC-------AGGGAATGA----CGAGGCAGGAGTCAAGA-GCCTCGGTTGCAGCTCCCGCTGTGCCGCCCACGaccggctctggggtcagatgatctgctggttcaaatcctgactcggcctcctactagccaggccagtc---tctagacccctcccagcctccatgtcctcacctcagaaaacagggt----cacaatacctgccttgccaacgtggtgaggaccagcggagaaggtgaaaggg------cttaTATTCCAAAG----CCCACAAGG------TAAGCATCCCT-CCCCATGGAGT---CCTCTCCCGGGCCCCT-GGAAAGCACGCATAGTCG-------ATCTGACTATAGTGAGGAGTGCGGGCTGCACC-CCAAGGCAGTGTAGGCGAGTCCCGGGCACCCACTCTCATCCCTGGTCCGGTGCG---------------------------------GCCCAGCTGCACACACAAATCTCACTTTTGCAGGAACTGTTCGTCTGCCTTCATAATACAGTTTGTTCTCCCCACTTCAA-GCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-----------------------------------CAGCCTACACAGCTGGAAGCCC--AGAGTGGTGCCCTTGGAG-----CCCG-------ATTTCCCCTG------GCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132979 584 - 190779 CCCCAGCTGGTTGTCCTGTGGACCTC--------GGGAATGA----CGAGGCAGGAGTCAAGA-GCCTCGGTTGCAGCTCCCGCTGTGCCGCCCACGaccggctccggggtcagatgatctgctggttcaaatcctgactcggcctcctactagccaggccagtc---tctagacccctcccagcctccatgtcctcacctcagaaaacagggt----cacaatacctgccttgccaacgtggtgaggaccagcggagaaggtgaaaggg------cttatattccaaag----cccacaagg------taagcATCCCT-CCCCATGGAGT---CCTCTCCCGGGCCCCT-GGAAAGCACGCATAGTCG-------ATCTGACTATAGTGAGGAGTGCGGGCTGCACC-CCAAGGCAGTGTAGGCGAGTCCCGGGCACCCACTCTCATCCCTGGTCCGGTGCG---------------------------------GCCCAGCTGCACACACAAATCTCACTTTTGCAGGAACTGTTCGTCTGCCTTCATAATACAGTTTCTTCTCCCCACTTCAA-GCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-----------------------------------CAGCCTACACAGCTGGAAGCCC--AGAGTGGTGCCCTTGGAG-----CCCG-------ACTTCCCCTG------GCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 83937 585 - 106623 CCCCAGCTGGTTGTCCTGTGGACCTC-------AGGGAATGA----CGAGGCAGGAGTCAAGA-GCCTCGGTTGCAGCTCCCACTGTGCCACCCACTaccggctctggggtcagatgatctgctggttcaaatcctgactcggcctcctactagccaggccagtc---tctagacccctcccagcctccatgccctcacctgagaaaacagggt----cacaattcctgccttgccaacgtggtgaggaccagcggagaaggtgaaaggg------cttaTATTCCAAAG----CCCACAAGG------TAAGCATCCCT-CCCCATGGAGT---CCTCTCCCGGGCCCCT-GGAAAGCACGCATAGTTG-------ATCTGACTATAGTGAGGAGTGCGGGCTGCACC-CCCAGGCAGTGTAGGCGAGTCCCGGGCACCCACTCTCATCCCTGGTCCGGTGCG---------------------------------GCCCAGCTGCACACACAAATCTCACTTTTGCAGGAACTGTTCGTCTGCCTTCATAATACAGTTTCTTCTCCCCACTTCAA-GCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-----------------------------------CAGCCCACACAGCTGGAAGCCC--AGAGTGGTGCCCTTGGAG-----CCTG-------ACTTCCCCTG------GCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2947468 586 - 123690457 CCCCGGCTGCTTGTCCTGTGGACCTC-------AGGGAATGA----CGAGGCAGGAGTCAAGA-GCCTCGGCTGCAGCTCCTGCTGTGCCGCCCACTaccggctctggggtcagatgatctgctggttcaaatcctgactcggcctcctactagccaggccagta---tccagacccctcccagcctccacgtcctcacctgagaaaacagggt----cacaatagctgccttgccaaggtggtgagga-cagtggagaaggtgaaaggg------cttaTATTCCAAAG----CCCACAAGG------TGAGCATCCCTCCCCCATGGAGT---CCTCTCCCGGGCCACT-GGAAAGCACACACAGTGG-------ATTTGACCATAGTGAGGAGTGCGGGCTGCACC-CCCAGGCAGTGTCGGCGAGTCCTGGGCGCCTGCTCTCATCGCTGCTCCGGTGCG---------------------------------GCCCAGCTGCACACACAAATCTCACTTTTGTAGGAACTGTTTGTCTGCCTTCATAATACAGTTTCTGCTCCCCACTTCAAGGCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-----------------------------------CAGCCCACACAGCTAGAAGCCC--AGAGTGGTGCCCTTGGAG-----CCTG-------ACTTCCCCTG------GCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2355659 561 - 204787373 CCCC-GCTGGCTGTCCTGTGGACCTC-------AGGGAATGA----CGAGGCAGC---------TCCTTGGTTGCAGCTGCCGCTGTGCTGCCCACTGctggctctggggccgga--------------------tgactcggcctcctactagcccggccagtc---tctagacccctcccagcctccatgtcctcacctgagaaaacagggt----cacaatacctgccttgccaaggtggtgaggaccagcggagaaggtgaaagggaaaacccttatattccaaag----cccacaagg------taagcATCCCTCCCCCATGGAGT---CCTCTCCCCGGCCACC-TGAAAGCACGCACAGTCG-------ATGTGACTATAGTGAGGAGTACGGGCTGCACC-CCCAGGCAGCG--GGCGAGTCCTGGGCACCCGCTGCCACCACTGGTCCATTGCA---------------------------------GCCCAGCTGCACACACAAATCTCA-CTTTGCAGGAACTGTTCCTCTGCCTTCATAATACAGTTTCTTCTCCCCACTTCAAGGCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-----------------------------------CAGCCCACACAGCTGGAAGCCC--AGAGTGGTGCCCTTGGAG-----CCTG-------ACTTCCCCTG------GCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192420842 561 - 192460366 CCCC-GCTGGCTGTCCTGTGGACCTC-------AGGGAATGA----CGAGGCAGC---------TCCTTGGTTGCAGCTGCCGCTGTGCTGCCCACTGctggctctggggccgga--------------------tgactcggcctcctactagcccggccagtc---tctagacccctcccagcctccatgtcctcacctgagaaaacagggt----cacaatacctgccttgccaaggtggtgaggaccagcggagaaggtgaaagggaaaacccttatattccaaag----cccacaagg------taagcATCCCTCCCCCATGGAGT---CCTCTCCCCGGCCACC-TGAAAGCACGCACAGTCG-------ATGTGACTATAGTGAGGAGTATGGGCTGCACC-CCCAGGCAGCG--GGCGAGTCCTGGGCACCCGCTGCCACCACTGGTCCATTGCA---------------------------------GCCCAGCTGCACACACAAATCTCA-CTTTGCAGGAACTGTTCCTCTGCCTTCATAATACAGTTTCTTCTCCCCACTTCAAGGCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-----------------------------------CAGCCCACACAGCTGGAAGCCC--AGAGTGGTGCCCTTGGAG-----CCTG-------ACTTCCCCTG------GCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19160406 561 - 19675229 CCCC-GCTGGCTGTCCTGTGGACCTC-------AGGGAATGA----CAAGGCAGC---------TCCTTGGTTGCAGCTGCCGCTGTGCTGCCCACTGCTGGCTCTGGGGCCGGc--------------------tgactcggcctcctactagcccggccagtc---tctagacccctcccagcctccatgtcctcacctgagaaaacaggct----cacaatacctgccttgccaaggtggtgaggaccagcggagaaagtgaaagggaaaacccttatattccaaag----cccacaagg------taagcATCCCTCCCCCATGGAGT---CCTCTCCCCGGCCACC-TGAAAGCACGCACAGTCG-------ATGTGACTACAGTGAGGAGTACGGGCTGCACC-CCCAGGCAGCG--GGCGAGTCCTGGGCACCCGCTGCCACCACTGGTCCATTGCA---------------------------------GCCCAGCTGCACACACAAATCTCA-CTTTGCAGGAACTGTTCCTCTGCCTTCATAATACAGTTTCTTCTCCCCACTTCAAGGCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-----------------------------------CAGCCCACACAGCTGGAAGCCC--AGAGTGGTGCCCTTGGAG-----CCTG-------ACTTCCCCTG------GCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16398218 561 - 16847902 CCCC-GCTGGCTGTCCTGTGGACCTC-------AGGGAATGG----CGAAGCAGC---------TCCTTGGTTGCAGCTGCCGCTGTGCCGCCCACTGCTGGCTctggggccgga--------------------cgactcggcctcctactagcccggccagtc---tctagacccctcccagcctccatgtcctcacctgagaaaacggggt----cacaatacctgccttgccaaggtggtgaggaccagcggagaagatgaaagggaaaacccttatattccaaag----cccacaagg------taagcATCCCCCCGCCATGGAGT---CCTCTCCCCGGCCACC-TGAAAGCACGCACAGTCG-------ATGTGACTCTAGTGAGGAGTACGGGCTGCACC-CCCAGGCAGCG--GGCGAGTCCTGGGCACCCGCTGTCACCACTGGTCCATTGCA---------------------------------GCCCAGCTGCACACACAAATCTCA-CTTTGCAGGAACTGTTCATCTGCCTTCATAATACAGTTTCTTCTCCCCACTTCAAGGCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-----------------------------------CAGCCCACACAGCTAGAAGCCC--AGAGTGGTGCCCTTGGAG-----CCTG-------ACTTCCCCTG------GCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91367155 562 + 91754291 CCCC-GCTGGTTGTCCTGTGGACCTC-------AGGGAATGA----CGAGGCAGG---------TCCTTGGTTGCAGCTGCCGCTGTGCTGCCCACTGCTGGCTCTGGGGCCGGA--------------------tgactcggcctcctactagcccggccagtc---tctagacccctcccagcctccgtgtcctcacctgagaaaacagggt----cacaatacctgccttgccaaggtggtgaggaccagcggagaaggtgaaagggaaaacccttATATTCCAAAG----CCCACAAGG------TAAGCATCCCTCCGCCATGGAGT---CCTCTCCCCAGCCACC-TGAAAGCACGCACAGTCG-------ATGTGACTATAGTGAGGAGTACGGGCTGCACC-CCCAGGCAGTGT-GACGAGTCCTGGGCACCCGCTGTCACCACTGGTCCCGTGCA---------------------------------GCCCAGCTGCACACACAAATCTCA-CTTTGCAGGAACTGTTCCTCTGCCTTCATAATACAGTTTCTTCTCCCCACTTCAAGGCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-----------------------------------CAGCCCACACAGCTAGAAGCCC--AGAGTGGTGCCCTTGGAG-----CCTG-------ACTTCCCCTG------GCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1437354 561 + 1977891 CCCC-ACTGGCTGTCCCGTGGACCTC-------AGGGAATGA----CGAGGCAGC---------TCCTTGGTTGCAGCTGCCGCTGTGCTGCCCACTGCTGGCTctggggccgga--------------------cgactcggcctcctactagcccggccagtc---tctagacccctcccagcctccatgtcctcacctgagaaaacagggt----cacaatacctgccttgccaaggtggtgaggaccagcggagaaagtgaaagggaaaacccttatattccaaag----cccacaagg------taagcATCCCCCCGCCATAGAGT---CCTCTCCCCGGCCACC-TGAATGCACGCACAGTCG-------ATGTGACTCTAGTGAGGAGTACGGGCTGCACC-CCCAGGCAGCG--GGCAAGTCCTGGGCACCCGCTGCCACCACTGGTCCATTGCA---------------------------------GCCCAGCTGCACACACAAATCTCA-CTTTGCAGGAACTGTTCATCTGCCTTCATAATACAGTTTCTTCTCCCCACTTCAAGGCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-----------------------------------CAGCCCACACAGCTAGAAGCCC--AGAGTGGTGCCCTTGGAG-----CCTG-------ACTTCCCCTG------GCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7373096 568 - 7796314 CCCG-GCTGGTTGTCCTGTGGACCTC-------AGGGAATGA----CGAGGCAGGAGTCAAGA-GCCTTGGTTGCAGCTGCCGCTGTGCTGCCCACTACTGGCTctggggctgga--------------------tgacttggcctcctactagcccggccagtc---tctagacccctcccagcctccatgtcctcacctgagaaaacagg-t----cacaatacctgccttgccaaggtggtgaggaccagcggagaaggtgaaagggaaaacccttatcttccaaag----cccacaagg------taagcATCCCTCCCCCATGGAGT---CCTCTCCCCGGCCACC-TGAAAGCACGCACAGTCG-------ATGTGACTGTAGTGAGGAGTACGGGCCGCACC-CCCAGGCAGCGC-GGCGAGTCCTGGGCACCCGCTGCCACCACTGGTCCACTGCA---------------------------------GCCCAGCTGCACACACAAACCTCACCTTTGCAGGAACTGTTCATCTGCCTTCATAAT--AGTTTCTTCTCCCCACTTCAAGGCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-----------------------------------CAGCCCACACAGCTAGCAGCCC--AGAGTGGTGCCCTCGGAG-----CCTG-------ACTTCCCCTG------GCA i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 213101 652 + 608964 CCTCAGCTCATCCTCCTGTGGACCCT-------GCTGAATGG----AAGAGCAGGAGTCACGAGGCCTCTGATTC-----------TGCTGCCCACCCCCAgctctggcgacagatgacctattggttcaaatc-ctcctctgcctcctactagccaggccagccactactaggcgtctcccagcttccatgtcctcacctgagaaaacagggt----cacaatacc-----caccaaagtggtaagg-ccaaaggaaaatgtgaatgggagagctcttatattccaaaggcatgccaagagg------t-----------tattaAGGAGTGTACCCCACCCCACCCGCCAAGGAACCCCTTAAAGTCACTTGGCTATTTTACTGCAGTGAGAATTGTAAGCTGCTCCACCCATGCACTGTAGGTGGGATGTGGGCATACACACCCATTCCTCATCCGGGgtgtgtgtgtgtgtgtgtgtgCATGCACACGCGCGTGCGCGCGCGCACACACACATGC---TTTCATAGGATC---TCAGGCTCCTTCAGAATACTCTTCCTTCTCCCCACTTCAAGACCTGAGTCC---TTTCTGACCCTTCTTGGTCTGTCCCCACAGAGTGAAAGCAGAGCTTTTGCGCCTCAGCCCACAGAGCCTGAAACCC--ACACAG--TCTCTCAGAGTCTGCCCCG-------ACCTCTCTTGAATGATGCA i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 2328431 565 - 31377067 CCTCAGTTTGTCCTCCCATGTCTCTCCCTGAgcagtgaaagagcactggaccaggaagcgaaa-gactgggctccggccctaggcctgttgccaacta---gctctgGAGTCCAA----TGACTGGCTCAAATCCTGACTCCGCGTCCTACCGGCCAGGCC--CC---TCCGGGCC-------GCCCTCGTG-------------AACCAGGGTTACCTACCAGACCTGCCTTGCC---GTGGTGAGGGCCTGAGGGGAAGGGGAACGGGAAAGT-CTTATATTCCAAAG----CCTGCAAGGGGCCACTAAGCACCCCTCCCCAGCCGTGT---CCTCTCAAAGAGGCAT-TGACAGCACACA-------------ACCT--------TCAGAAGGTCAGGCTGGCCC-CACATGCGTATCAGGTGAGTCACGG-------CCTTCACC------------CT---------------------------------CCTCAGCTG--TTCACGAATCGTGCTTCTACGGG--------------------AATATACTTCCTTCTCCCCACTTCAAAGCCCAAG-CCATTTCTCTGAGCTTCCTCAATC----CCCACCCGGTGGAATCAAAGCCTTTCTGTGTCAGCCCACACAAGCTAAGGCCCCAACAGAGGTATTCTTGGGG-----TCTGACCACCCACCTCCCCTG------AAG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14800183 1280 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88394568 1539 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e saiBol1.JH378146 17293667 388 - 17725628 T e calJac3.chr17 73850477 385 + 74750902 T e cebCap1.NW_016107444v1 6383844 28 + 6778120 I a score=66294.000000 s hg38.chr3_KI270934v1_alt 71513 15 + 163458 CATTTTCTGGCTTAT s panTro5.chr3 2543793 11 - 202621043 CATTTTCCG----AT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133563 11 - 190779 CATTTTCCG----AT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 84522 15 - 106623 CATTTTCTGGCTTGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2948054 15 - 123690457 CATTTTCCGGCTTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2356220 15 - 204787373 CATTTTCCAGCTTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192421403 15 - 192460366 CATTTTCCAGCTTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19160967 15 - 19675229 CATTTTCCAGCTTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16398779 15 - 16847902 CATTTTCCAGCTTTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91367717 15 + 91754291 CATTTTCCAGCTTTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1437915 15 + 1977891 CATTTTCCAGCTTTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7373664 15 - 7796314 CATTTTCCAGCTTTT i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 14801463 14 - 22200726 CATTTTCTT-CCTTT i proCoq1.NW_012133858v1 I 1280 I 1 s otoGar3.GL873829 213754 14 + 608964 TATTGTTTT-CTTTT i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 2328996 15 - 31377067 TATTTTCTTCTTTAT i canFam3.chr33 C 0 C 0 e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88394568 1539 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e saiBol1.JH378146 17293667 388 - 17725628 T e calJac3.chr17 73850477 385 + 74750902 T e cebCap1.NW_016107444v1 6383844 28 + 6778120 I a score=578792.000000 s hg38.chr3_KI270934v1_alt 71528 65 + 163458 CCAGGAGCCCCGGGGTGTCC-TTTCTGCTGTGAAACCTCCTCATGCTCCCCAAGCCCACAGCCTCT s panTro5.chr3 2543804 65 - 202621043 CCAGGAGCCCCGGGGTGTCC-TTTCTGCTGTGAAACCTCCTCATGCTCCCCAAGCCCACAGCCTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133574 65 - 190779 CCAGGAGCCCCGGGGTGTCC-TTTCTGCTGTGAAACCTCCTCATGCTCCCCAAGCCCACAGCCTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 84537 64 - 106623 CCAGGAGCCCCGGGGTGTCC--TGCTGCTGTGAAACCTCCTCATGCTCCCCAAGCCCACAGCCTCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2948069 65 - 123690457 CCAGGAGCCCCGGGGTGTCC-TTTCTGCTGTGAAACCTCCTCGTGCTCCCCAAGCCCACAGTCTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2356235 65 - 204787373 CCAGGAGCCCCGGGGTGTCA-GTTTTGCTGTGAAACCTCCTCATGCTCCCCAAGCCCACAGCCTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192421418 65 - 192460366 CCAGGAGCCCCGGGGTGTCA-GTTTTGCTGTGAAACCTCCTCATGCTCCCCAAGCCCACAGCCTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19160982 65 - 19675229 CCAGGAGCCCCGGGGTGTCA-GTTTTGCTGTGAAACCTCCTCATGCTCCCCAAGCCCACAGCCTTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16398794 65 - 16847902 CCAGGAGCCCCGGGGTGTCA-TTTTTGCTGTGAAACCTCCTCATGCTCCCCAAGCCCACAGCCTTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91367732 65 + 91754291 CCAGGAGCCCTGGGGTGTCA-TTTTTGCTGTGAAACCTCCTCCTGCTCCCCAAGCCCACAGCCTTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1437930 65 + 1977891 CCAGGAGCCCCAGGGTGTCA-TTTTTGCTGTAAAACCTCCTCATGCTCCCCAAGCCCACAGCCTTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7373679 53 - 7796314 -------CCCCGGGGTGTCA-GTTTTGCTGTGAAACCTCCTCATGCTCCCCAAGCCCACAG----- i colAng1.NW_012118932v1 C 0 C 0 s micMur3.chr1 88396107 65 + 114275543 CCAGGAGCCCTGGGGTGTCA-TTTCTGCTGTGCAACCTCCTCATGCTCCTCGAGCCCATAGCCTCT i micMur3.chr1 I 1539 I 668 s proCoq1.NW_012133858v1 14801478 65 - 22200726 CCAGGAGCCCTGTGGTGTCA-TTTCTGCTGTGCAACCTCCTCATGCTCCCCAAGCCCATAGCCTCT i proCoq1.NW_012133858v1 I 1 I 665 s otoGar3.GL873829 213768 66 + 608964 CCAGGAGCCTTGCAGTGTCATTTTTTGCTATGAAACCTCCTCGTGCTCCCCAAGCCTGTAGCCTCC i otoGar3.GL873829 C 0 I 34 s canFam3.chr33 2329011 63 - 31377067 CCGGGAACCCCACAATATCA--TCCTTCTGTGAAACCTCCTCATGCCTCCC-AGCCCCTAACCTCT i canFam3.chr33 C 0 C 0 e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e dasNov3.JH569502 2708474 8458 - 6579706 I e saiBol1.JH378146 17293667 388 - 17725628 T e calJac3.chr17 73850477 385 + 74750902 T e cebCap1.NW_016107444v1 6383844 28 + 6778120 I a score=1514784.000000 s hg38.chr3_KI270934v1_alt 71593 262 + 163458 ---------------CGGGTCCA------------------------------AGGGGGTCTTCTCGAATACAGCAAATCCCAGCCCAGCCCCCTCAGTAGCTCTGGAACACTGCGGCTCTCCTGGTACAATCTTCAaat----ctggtggagaggaaagcgtgtggacttgggaccctgagttggagaatctgctctct---------gc--------------cctgt-gaccctggccaagtctctcagctccaagcctgcatttccgcacctgtaaggtggagc-------------------------------------------taaCGGGAC-------------ACGTGCAGCGCAGACCAGGC-CACGGTGAGCACAGGCAG s panTro5.chr3 2543869 261 - 202621043 ---------------CGGGTCCA------------------------------GGGGGGTCTTCTCAAATACAGCAAATCCCGGCCCAGCCCC-TCGGTAGCTCTGGAACACTGCGGCTCTCCTGGTACAATCTTCAaat----ctggtggagaggaaagcgtgtggacttgggaccctgagttggagaatctgctctct---------gc--------------cctgt-gaccctggccaagtctctcagctccaagcctgcatttccgcacctgtaaggtggagc-------------------------------------------taaCGGGAC-------------ACGTGCAGCGCAGACCAGGC-CATGGTGAGCACGGGCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133639 261 - 190779 ---------------CGGGTCCA------------------------------GGGGGGTCTTCTCGAATACAGCAAATCCCGGCCCAGCCCC-TCGGTAGCTCTGGAACACTGCGGCTCTCCTGGTACAATCTTCAaat----ctggtggagaggaaagcgtgtggacttgggaccctgagttggagaatctgctctct---------gc--------------cctgt-gaccctggccaagtctctcagctccaagcctgcatttccgcacctgtaaggtggagc-------------------------------------------taaCGGGAC-------------ACGTGCAGCGCAGACCAGGC-CATGGTGAGCACGGGCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 84601 261 - 106623 ---------------CCGGTCCT------------------------------GGGGGGTCTTCTCAAATACAGCAAATCCCGGCCCAGCCCC-TCGGTAGCTCTGGAACACTGCGGCTCTCCTGGTACAATCTTCAaat----ctggtggagaggaaagcgtgtggacttgggaccctgagttggagaatctgctctct---------gc--------------cctgt-gaccctggccaagtctctcagctccaagcctgcatttccgcacctgtaaggtggagc-------------------------------------------taaCGGGAC-------------ACGTGCAGCGCAGACCAGGC-CACGGTGAGCACAGGCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2948134 260 - 123690457 ---------------CGGGTCCA------------------------------GGGGGGTCTCCTCAAATATGGCAAAGCCCGGCCCAGCCCC-TCGGTGGCTCCGGAACACTGCGGCTCTCCTGGTACAGTCTTCAAAT----Ctggtggagaggaaagcgtgtggacttgggaccctgagctggagaatctgctctcc---------gc--------------cctgt-gaccctggccaagtctctcagctccaagcctgca-ttctgcacctgtaaggtggagC-------------------------------------------TCACGGGAC-------------ACGTGCAGCGTAAACCAGGC-CACGGTGAGCACAGGCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2356300 255 - 204787373 ---------------TGGGTCC-------------------------------GGAGGGTCTTCTCAAATACAGCAAAGCCCGGCCCAGCCCC-TCGGGAGCTCTGGAACACTGCGGCTCTCCTGGTACCATCTTCcaat----ctggtggagaggaaagcaggtggactggggaccctgagttggagaacctgctctct---------gc--------------cctgt-gaccctggccaagtctctcagctccaagcctgcatttctgcatccgtaaggtggagc-------------------------------------------taaCGGGAC-------------ATGTG-----CACACCAGGC-CACGGTGAGCACAGGCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192421483 255 - 192460366 ---------------TGGGTCC-------------------------------GGAGGGTCTTCTCAAATACAGCAAAGCCCGGCCCAGCCCC-TCGGGAGCTCTGGAACACTGCGGCTCTCCTGGTACCATCTTCcaat----ctggtggagaggaaagcaggtggactggggaccctgagttggagaacctgctctct---------gc--------------cctgt-gaccctggccaagtctctcagctccaagcctgcatttctgcatccgtaaggtggagc-------------------------------------------taaCGGGAC-------------ATGTG-----CACACCAGGC-CACGGTGAGCACAGGCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19161047 255 - 19675229 ---------------TGGGTCC-------------------------------GGGGGGTCTTCTCAAATACAGCAAACCCCAGCCCAGCCCC-TCGGGAGCTCTGGAACACTGCGGCTCTCCTGGTACCATCTTCcaat----ctggtggagaggaaagcaggtggactggggaccctgagtcggagaacctgctctct---------gc--------------cctgt-gaccctggccaagtctctcagctccaagcctgcatttctgcatccgtaaggtggagc-------------------------------------------taaCGGGAC-------------ATGTG-----CACGCCAGGC-CACGGTGAGCACAGGCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16398859 255 - 16847902 ---------------TGGGTCC-------------------------------GGGGGGTCTTCCCAAATACAGCAAAGCCCGGCCCAGCCCC-TCGGGAGCTCTGGAACACTGCGGCTCTCCTGGTACCATCTTCcaat----ctggtggagaggaaagcaggtgaactggggaccctgagttgcagaacctgctctct---------gc--------------cctgt-gaccctggccaagtctctcagctccaagcctgcatttccgcatctgtaaggtggagc-------------------------------------------taaCGGGAC-------------ATGTG-----CACACCAGGC-CACGGTGAGCACAGGCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91367797 249 + 91754291 ---------------TGGGTCC-------------------------------AGGGGGTCTTCTCAAATACAGCAAAGCCCGGCCCAGCCCC-TCAGTAGTTCTGGAACACTGCGGCTCTCCTGGTACCATCTTCCAAt----ctggtggagaggaaagcaggtggactggggaccctgagctggagaacctgctctct---------gt--------------cctgt-gaccctggccaagtctctcagctccacgcctgcatttctgcatctgtaaggtggagc-------------------------------------------taacgGGAC-------------GTGTG-----CACACCA-------GGTGAGCACAGGCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1437995 255 + 1977891 ---------------TGGGTCC-------------------------------GGGGGGTCTTCTCAAATACAGCAAAGCCCGGCCCAGCCCC-TCAGTAGTTCTGGAACACTGCGGCTCTCCTGGTACCATCTTCTaat----ctggtggagaggaaagcaggtgaactggggaccctgagttggagaacctgctctct---------gc--------------cctgt-gaccctggccaagtctctcagctccaagcctgcatttccgcatctgtaaagtggagc-------------------------------------------taaCGGGAC-------------ATGTG-----CACACCAGGC-CACGGTGAGCACAGGCAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7373732 227 - 7796314 -------------------------------------------------------------------------------CCCGGCCCAGCCTC-TCGGTAGCTCTGGAACACTGCAGCTCTCCTGGTACAATCTTCAaat----ctggtggagaggaaagcaggtggacttgggaccctgagttggagaacctgctctct---------gc--------------cctgt-gaccctggccaagtctctcagctccaagcctgcatttccgcatctgtaaggtggagc-------------------------------------------taaGAGGAC-------------ACGTGCAGCACAAACAAGGC-CACGGTGAGCACAGGCAG i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 213868 311 + 608964 ---------------AGGCTCCT------------------------GCCTGCCAGGAGTCTCCTCAAATAGAGCAAAGT---------CACC-TCTACAGCCCTGGGACACTGCAGCTGTGTCCGTTCC--CCTCcagt----gtgg-ggagaagaaagtgtgtggacttcagattctggttt---tagtcccctctct---------gcggctcggtttgctgcttgcagaccctggccaaatttctcagttccaagcctaaattttcttacctgtaaaacggagctaggagtacctatatcatggggttgtgaggattaaattaaatttaatggaaa-------------atgtgcagcacaaacctggtggactgtgagcacATGTGG i otoGar3.GL873829 I 34 C 0 s canFam3.chr33 2329074 329 - 31377067 TCACCCCCCCACCCTGGGGTCTCACAGCCCCCCCACCCAAGTCTCCTACCCAGCAGGGGTCTTCTCAGACGCAGCAAAGCCCA-CGCAGCCCG-C--ACAACTCTAGAATGTGGCAGCTCTCCTGGTCTATTCCTCAAATCACACtggcagagaggaaggtgcgtgttctttggggcctgagtctgaatccctgctctcctgctttccaac--------------catgt-caccctggccaggtctcctggctcccagcctgcactttctcatctgtaaaatggagc-------------------------------------------taagggcacctgtttcacagggatgtgaagagtaaatcaatc-caagtgtaaaacgtgcag i canFam3.chr33 C 0 I 5697 e proCoq1.NW_012133858v1 14801543 665 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88396172 668 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e saiBol1.JH378146 17293667 388 - 17725628 T e calJac3.chr17 73850477 385 + 74750902 T e cebCap1.NW_016107444v1 6383844 28 + 6778120 I a score=897979.000000 s hg38.chr3_KI270934v1_alt 71855 167 + 163458 GAGGCCACGGGGTGCAGTGCTCAGGCCTGTGAGGAGTCAGATTCTGGCTCCGAGGAGTTGTTACTGGATGCCCA-GAAGCACAGTGGCCTCATCCTTAAAGCAGTGGAGGTGGGGGGtggtaagaacagggccgatcttgcagggccgttgtgaggattaaaaataca s panTro5.chr3 2544130 167 - 202621043 GAGGCCACGGGGTGCAGTGCTCAGGCCTGTGGAGAGTCAGATCCTGGCTCCGAGGAGTTGTTACTAGATGCCCA-GAAGCACAGTGGCCTCACCCTTAAAGCAGTGGAGGTGGTGGGtggtaagaacagggccgatcttgcagggccgttgtgagaattaaaAATACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133900 167 - 190779 GAGGCCACGGGGTGCAGTGCTCAGGCCTGTGGGGAGTCAGATCCTGGCTCCGAGGAGTTGTTACTAGATGCCCA-GAAGCACAGTGGCCTCACCCTTAAAGCAGTGGAGGTGGTGGGtggtaagaacagggccgatcttgcagggccgttgtgagaattaaaAATACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 84862 167 - 106623 GAGGCCACGGGGTGCAGTGCTCAGGCCTGTGGGGAGTCAGATCCTGGCTCCGAGGAGTTGTTACTGGACGCCCA-GAAGCACAGTGGCCTCACCCTTAAAGCAGTGGAGGTGGGGGGTGGTAAGAACAGGGCGGatcttgcagggccgttgtgaggattaaaaatata i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2948394 165 - 123690457 GAGGCCGCGGAGTGCAGTTCTCAGGCCTGTGTGGAGTCAGATCCTGGCTCC--GGAGTTCTTACTGGATCCCCA-GAAGCACAGTGGCCTCATCCTTAAAGCAGTGGAGGTGGGGGGTGGTAAGAACAGGGCGGATCTTGGAGGGCCATTGTGAGGGTTAAAAATATA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2356555 165 - 204787373 GAGGCCGAGGCGTGCAGTCCTCAGGCCTGTGTGGAGTCAGATCCTGGCTCCGAGGAGGAGTCACTGGGTCCCCA-GAAGCACAGTGGCCTCATCCTTAAAGCGGTGGA-GTCCGGGGTGGTCAGAGCAGGGTC-ATCTTGTAGGGCCATTGTGAGGGTTAAAAATATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192421738 165 - 192460366 GAGGCCGAGGCGTGCAGTGCTCAGGCCTGTGTGGAGTCAGATCCTGGCTCCGAGGAGGAGTCACTGGGTCCCCA-GAAGCACAGTGGCCTCATCCTTAAAGCGGTGGA-GTCGGGGGTGGTCAGAACAGGGTC-AACTTGTAGGGCCATTGTGAGGGTTAAAAATATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19161302 165 - 19675229 GAGGCCGAGGCGCGCAGTGCTCAGGCCTGTGTGGAGTCCGATCCTGGCTCCGAGGAGGAGTCACTGGATCCCCA-GAAGCACAGTGGCCTCATCCTTAAAGCGGTGGA-GTCCGGGGTGGTCAGAGCAGGGTC-ATCTTGTAGGGCCATTGTGAGGGTTAAAAATATA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16399114 166 - 16847902 GAGGCCGCGGCGTGCAGTGCTCAGGCCTGTGTGGAGTCAGATCCTGGCTCTGAGGAGGAGTCACTGGATCCCCA-GAAGCACAGTGGCCTCATCCTTAAAGCAGTGGAGGTCGGGGGTGGTCAGAACAGGGTC-ATCTTGTAGGGCCATTGTGAGGGTTAAAAATATA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91368046 165 + 91754291 GAGGCCGCGGCGTGCAGCGCTCAGGCCTGTGTGGAGTCAGAGCCTGGCTCCGAGGAGTCGTCACTGGATCCCCA-GAAGCACAGTGGCCTCATCCTTAAAGCAGTGGAGGTCGGGGGTGGTCAGAACAGGGTC-ATCTTGTAGGGCCATTGTGAGGGTTAAAAATAC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1438250 166 + 1977891 GAGGCCGCGGCGTGCAGTGCTCAGGCCTGTGTGGAGTCAGATCCTGGCTCCAAGGAGGAGTCACTGGATCCCCA-GAAGCACAGTGGCCTCATCCTTAAAGCAGTGGAGGTCAGGGGTGGTCAGAACAGGGTC-ATCTTGTAGGGCCATTGTGAGGGTTAAAAATATA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7373959 166 - 7796314 GCGGCCGCGGCGTGCCGTGCTCAGGCCTGTGTGGAGTCAGATCCTGGCTCCGAGGAGGAGTCACTGGATCCCCA-GAAGCACAGTGGCCTCATCCTCAAAGCAGTGGAGGTCGGGGGTGGTCAGAACAGGGcc-atcttgtagggccattgtgagggttaaaaatata i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 214179 165 + 608964 GAGGCAGTATGGTACTGTGGTTGGGCATGCATGGCACTGAATCCTCCCTCCG-GGATGGGTTGCTTAATCCCAGTAAAGCTCCATCTCCTCAGCTGAAAAGGGCAGGAGGT-GCAGGTGGTAAGACTATGCTT-ATCTCCTAGGGCTATCATGAACATTGAAAAAACA i otoGar3.GL873829 C 0 I 320 e proCoq1.NW_012133858v1 14801543 665 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88396172 668 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e saiBol1.JH378146 17293667 388 - 17725628 T e calJac3.chr17 73850477 385 + 74750902 T e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I a score=665175.000000 s hg38.chr3_KI270934v1_alt 72022 127 + 163458 atgtatgataatgatgcatcaaagtaggttcctcagtcctatcaaatgtgccactctggtgggggacgctgatgatgggggaggctgtgagtggtggggatgggaactccagactctccactgcagc s panTro5.chr3 2544297 127 - 202621043 Atgtatgataatgatgggtcaaagtaggttcctcagtcctaacaaatgtgccactctggtgggggatgctgatgatgggggaggctgtgagtggtggggatgggaactccagactctccactgcagc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 134067 127 - 190779 AtgtatgataatgatgggtcaacgtaggttcctcagtcctaacaaatgtgccactctggtgggggatgctgatgatgggggaggctgtgagtggtggggatgggAACTCCAGACTCTCCACTGCAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 85029 124 - 106623 atgT---ataatgatgcgtcaaagtaggttcctcagtcctaacaaatgtgccgctctggtgggggacgttgatgatgggggaggctgtgagtggtggggatgggaactccagactctccactgcagc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2948559 127 - 123690457 Atgtatgataatgctgtgtcaaagtagattcctcggtcctaacaaatgtgccactctggtgggggacgtcgatgatgggggaggctgtgagtggtggggatgggaactccatactctccactccagt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2356720 127 - 204787373 ATGTAtgataatgatgcatcaaagtaggttcctcagtcctaacaaacgtgccactctggtgggggatgttgatgatgggggaggctgtaagtggtggggatgggaactcgatactctctgctcaagt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192421903 127 - 192460366 ATGTAtgataatgatgcatcaaagtaggttcctcagtcctaacaaacgtgccactctggtgggggatgttgatgatgggggaggctgtaagtggtggggatgggaactcgatactctctgctcaaGt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19161467 127 - 19675229 Atgtatgataatgatgcatcagtgtaggttcctcagtcctaacaagcgtgccactctggtgggggatgttgatgatgggggaggctgtaagtggtggggatgggaactcgatactctctgctcaagt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16399280 127 - 16847902 Atgtatgataatgatgcatcaaagtaggttcctcagtcctaacaaatgtgccactctggtgggggatgttgatgatgggggaggctgtaagtggtggggatgggaactcgatactctctgctcaagt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91368211 123 + 91754291 -TATACgataatgatgcatcaaagtaggttcctcagtcctaacagacgtgctgctctggtgggggatgt---cgatggcagaggctgtacgtggtggggatgggaactcgatactctccgctcaagt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1438416 127 + 1977891 AtgtatgataatgatgcatcaaagtaggttcctcagtcctaacaaacatgccactctggtaggggatgttgatgatgggggaggctgtaagtggtggggacgggaactcgctacactctgctcaaGt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7374125 123 - 7796314 atgtatgataatgatgcattaaagtaggttcctcagtcctaacaaacgtgccactctggtgggggatgttgatgatgggggaggctgtaagtggtggggatgggaactcgatactctccactc---- i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14801543 665 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88396172 668 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e saiBol1.JH378146 17293667 388 - 17725628 T e calJac3.chr17 73850477 385 + 74750902 T e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 214344 320 + 608964 I a score=16676.000000 s hg38.chr3_KI270934v1_alt 72149 3 + 163458 ttt s panTro5.chr3 2544424 3 - 202621043 ttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 134194 3 - 190779 ttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 85153 3 - 106623 ttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2948686 3 - 123690457 ttc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2356847 3 - 204787373 ttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192422030 3 - 192460366 ttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19161594 3 - 19675229 ttt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16399407 3 - 16847902 ttt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91368334 3 + 91754291 ttt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1438543 3 + 1977891 ttt i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 17293279 3 - 17725628 ttt i saiBol1.JH378146 T 388 C 0 e proCoq1.NW_012133858v1 14801543 665 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88396172 668 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e calJac3.chr17 73850477 385 + 74750902 T e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 214344 320 + 608964 I e colAng1.NW_012118932v1 7374248 0 - 7796314 C a score=1498073.000000 s hg38.chr3_KI270934v1_alt 72152 227 + 163458 tt----------tttttttttg----------aaacacagtttcacttttgttgccca--------ggccagagcgcaacggtgcgatctcagctcactgcaaactccacctcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcacctgctaccacccccggctaa-ttttgtatttttagtagagac-ggggtttctccatgttggtcaggctggtctcgaactcctgacctc s panTro5.chr3 2544427 222 - 202621043 tt----------tttt-----g----------aaacatagtttcactcttgttgccca--------ggccagagtgcaatggtgcgatctcagctcactgcaaactccacctcccaggttcaagcaattctcctgcctcagcctcccgagtaggtgggattacaggcacctgctaccacccccggctaa-ttttatatttttagtagagac-ggggtttctccatgttggtcaggctggtctcgaactcctgacctc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 134197 221 - 190779 tt----------ttt------g----------aaacatagtttcactcttgttgccca--------ggccagagtgcaatggtgcgatctcagctcactgcaaactccacctcccaggttcaagcaattctcctgcctcagcctcccgagtaggtgggattacaggcacctgctaccacccccggctaa-ttttatatttttagtagagac-agggtttctccatgttggtcaggctggtctcgaactcctgacctc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 85156 225 - 106623 tt----------tttttt---g----------aaatagagtttcacttttgttgccgg--------ggccagagtgcaatggtgagatctcagctcactgcaaactccacctcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcacctgctaccacccccagctaa-ttttgtatttttagtagagacgggggtttctccatgttggtaaggctggtctcgaactcccaacctc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2948689 226 - 123690457 tt----------tttttttt-g----------aaacagagtttcacttttgttgccca--------ggccagagtgcaatggcaagatctcagctcactgcaacccccacctcccaggttcaagcaattctcttgcgtcagcctcccaagtagctgggattacaggcacctgctaccacacccggctaa-ttttgtatttttagtagagac-ggggtttctccatgttggtcaggctggtctccaactcccgacctc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2356850 234 - 204787373 ttgtttttttgttttttttttt----------aaac--agtttcactc-tgttgccca--------ggctggagtgcagtggcgtgatcttggctcgctgcaacctccacctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcagctgctaccacatcccgctaa-ttttgtacttttagtagagac-ggggtttctccatgttggtcaggctggtctcaaactcctgacctc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192422033 234 - 192460366 ttgtttttttgttttttttttt----------aaac--agtttcactc-tgttgccca--------ggctggagtgcagtggcgtgatcttggctcgctccaacctccacctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcagctgctaccacatcccgctaa-ttttgtatttttagtagggac-ggggtttctccatgttggtcaggctggtctcaaactcctgacctc i macFas5.chr2 C 0 I 1239 s macNem1.NW_012014355v1 19161597 233 - 19675229 ttgtttttttg-tttttttttt----------aaac--agtttcactc-tgttgccca--------ggctggagtgcagtggcgtgatcttggctcgctgcaacctccacctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcagctgctaccacatcccgctaa-ttttgtatttttagtagggac-ggggtttctccatgttggtcaggctggtctcaaactcctgacctc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16399410 227 - 16847902 ttttt-------ttttttttta----------aaac--agtttcactc-tgttgccca--------ggctagagtgcagtggcgtgatcttggctcactgcaacctccacctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcagctgctaccacatcccgctaa-ttttgtatttttagtagggac-ggggtttctccatgaaggtcaggctggtctcaaactcctgacctc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91368337 232 + 91754291 tt----------tttttttttt----------aaac--agtttcactc-tgttgcccagtgcagtgggctggagtgcagtggcgtgatcttggctcactgcaacctccacctcccaggttcaagcaattctcctacctcagcctcctgagtagctgggattacaggcagctgctaccacatcccgctaa-ttttgtatttttagtagagac-ggggtttctccatgttggtcaggctggtctcaaactcctgacctc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1438546 234 + 1977891 tt----------tttttttttttttttaaaaaaaac--agtttcactc-tgttgccca--------ggttacagtgcagtggcgtgatcttggctcactgcaacctccacctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcagctgctaccacatcccgctaa-ttttgtatttttagtagggac-ggggtttctccatgttggtcaggctggtctcaaactcctgacctc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7374248 224 - 7796314 tt----------tttttttttt----------aaac--agtttcacgc-tgttgccca--------ggctggagtgcagtggcgtgatcttggctcactgcaaactccacctcccaggttcaagcaattctcctgcttcagcctcctgagtagctgggattacaggcgcccgccaccacatcccactaa-ttttgtatttttagtagagat-ggggtttctccatgttggtcaggctggtctcaaactcctgacctc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73850092 228 + 74750902 tt----------tatttttttg----------agatgaagtttcattctttttgagca--------ggctggagtgcagtgacgcaatcacggctcaccgcaacctccacctcctgggttcaggtgattctcccgcctcagcctcccaagtagctggcattacaggcacgcgccaccatggccggctaatttttgcatttttagtacagat-ggggtttcaccgggttggtcaggctggtctcgaattccagacctc i calJac3.chr17 T 385 C 0 s saiBol1.JH378146 17293282 228 - 17725628 tt----------tattttttca----------agatgaagtgtcactctttttgccca--------ggctggagtgcagtggcgcaatcttgactcaccgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccaagtcgctggcattacaggcatacgccaccacgcccagctaatttttgcatttgcagtagagac-ggggtttcaccatgctggtcagactggtctcgaactccagacctc i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14801543 665 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88396172 668 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 214344 320 + 608964 I a score=251940.000000 s hg38.chr3_KI270934v1_alt 72379 43 + 163458 aggtgatccacccacctcagcc--tcccaaaatgctggga-ttaca s panTro5.chr3 2544649 43 - 202621043 aggtgatccgcccacctcggcc--tcccaaaatgctggga-ttaca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 134418 43 - 190779 aggtgatccgcccacctcggcc--tcccaaaatgctggga-ttaca i panPan2.chrUn_NW_014024201v1 C 0 M 864 s gorGor5.CYUI01000576v1 85381 43 - 106623 aggtgatccgcccacctcggcc--tcccaaaatgctggga-ttaca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2948915 43 - 123690457 aggtgatccgcccgcctcagcc--tcccaaaatgctggga-ttaca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2357084 46 - 204787373 gggtgatctgcccgccttggccctcctcaaaatgctgggatttaca i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19161830 43 - 19675229 aggtgattcacccgccttggcc--tcccaaaatgctggga-ttaca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16399637 38 - 16847902 aggtgatccgcccgccttggcc--tcccaaaatgc------ttaca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91368569 43 + 91754291 aggtgatccacccgccttggcc--tcccaaaatgctggga-ttaca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1438780 43 + 1977891 aggtgatccgcccgccttggcc--tcccaaaatgctggga-ttaca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7374472 43 - 7796314 aggtgatccacctgcctcggcc--tcccaaaatgctggga-ttaca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73850320 43 + 74750902 aggtgatccacatgccccggcc--tctaaaagtgctggga-ttaca i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17293510 43 - 17725628 aggtgatccacatgccccagcc--tccaaaggtgctggga-ttaca i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14801543 665 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88396172 668 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 214344 320 + 608964 I e macFas5.chr2 192422267 1239 - 192460366 I a score=74190.000000 s hg38.chr3_KI270934v1_alt 72422 18 + 163458 ggtgtgagccaccacgcc s panTro5.chr3 2544692 18 - 202621043 ggtgtgagccaccgtgcc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 85424 18 - 106623 ggtgtgagccaccgtgcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2948958 18 - 123690457 ggtgtgagccactgcacc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2357130 18 - 204787373 ggtgtgagccactgcacc i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19161873 18 - 19675229 ggtgtgagccactgcacc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16399675 18 - 16847902 ggtgtgagccactgcacc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91368612 18 + 91754291 ggtgtgagccactgcacc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1438823 18 + 1977891 ggtgtgagcTGTGATTAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7374515 18 - 7796314 ggtgtgagccatcgcacc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73850363 18 + 74750902 agcgttagcctctgcccc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17293553 18 - 17725628 agcgttagcctctgcccc i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14801543 665 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88396172 668 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 214344 320 + 608964 I e macFas5.chr2 192422267 1239 - 192460366 I e panPan2.chrUn_NW_014024201v1 134461 864 - 190779 M a score=22778.000000 s hg38.chr3_KI270934v1_alt 72440 5 + 163458 cggcc s panTro5.chr3 2544710 5 - 202621043 cggcc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 85442 5 - 106623 cggcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2948976 5 - 123690457 cagcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2357148 5 - 204787373 cggcc i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19161891 5 - 19675229 cggcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16399693 5 - 16847902 cggcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91368630 5 + 91754291 tggcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1438841 5 + 1977891 AGGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7374533 5 - 7796314 cggcc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73850381 5 + 74750902 tgacc i calJac3.chr17 C 0 I 106 s saiBol1.JH378146 17293571 5 - 17725628 tgacc i saiBol1.JH378146 C 0 I 5 s otoGar3.GL873829 214664 5 + 608964 ggaac i otoGar3.GL873829 I 320 C 0 e proCoq1.NW_012133858v1 14801543 665 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88396172 668 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e macFas5.chr2 192422267 1239 - 192460366 I e panPan2.chrUn_NW_014024201v1 134461 864 - 190779 M a score=146441.000000 s hg38.chr3_KI270934v1_alt 72445 39 + 163458 t-ctccactcgag---------------------gtttagagggagcatagaactgctcta s panTro5.chr3 2544715 39 - 202621043 t-ctccactcgag---------------------gtttagagcgagcatagaactgctcta i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 85447 39 - 106623 t-ctccactcgag---------------------gtttagagcgagcatagaactgctcta i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2948981 39 - 123690457 t-ctccactcgag---------------------gtttagagtgaacctagaactgctcta i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2357153 40 - 204787373 tgctccactcaag---------------------gtttagagcaaacctagaactgctcta i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19161896 39 - 19675229 t-ctccactcaag---------------------gtttagagcaaacctagaactgctcta i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16399698 39 - 16847902 t-ctccactcaag---------------------gtttagagcaaacctagaactgctcta i cerAty1.NW_012004056v1 C 0 I 53 s chlSab2.chr15 91368635 39 + 91754291 t-ctccactcaag---------------------gtttagagcaaacctagaactgctcta i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1438846 39 + 1977891 T-CTCCACTCAAG---------------------GTTTAGAGCAAACATAGAACTGCTCta i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7374538 39 - 7796314 t-ctccactcaaa---------------------gtttagagcaaacctagaactgctcta i colAng1.NW_012118932v1 C 0 I 19 s saiBol1.JH378146 17293581 56 - 17725628 C-TAACATTTTAGAAAGGGGCTGCTGGCACTTCTGCCTAGAGCAG----AGGCCTGTTCCC i saiBol1.JH378146 I 5 I 17 s otoGar3.GL873829 214669 37 + 608964 t-ctgcattct-----------------------atttgctgtgaatctaaaactgctctt i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14801543 665 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88396172 668 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e calJac3.chr17 73850386 106 + 74750902 I e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e macFas5.chr2 192422267 1239 - 192460366 I e panPan2.chrUn_NW_014024201v1 134461 864 - 190779 M a score=10010.000000 s hg38.chr3_KI270934v1_alt 72484 2 + 163458 aa s panTro5.chr3 2544754 2 - 202621043 aa i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 85486 2 - 106623 aa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2949020 2 - 123690457 aa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2357193 2 - 204787373 aa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192423506 2 - 192460366 aa i macFas5.chr2 I 1239 C 0 s macNem1.NW_012014355v1 19161935 2 - 19675229 aa i macNem1.NW_012014355v1 C 0 I 83 s chlSab2.chr15 91368674 2 + 91754291 aa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1438885 2 + 1977891 aa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7374596 2 - 7796314 aa i colAng1.NW_012118932v1 I 19 C 0 s otoGar3.GL873829 214706 2 + 608964 aa i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14801543 665 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88396172 668 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e saiBol1.JH378146 17293637 17 - 17725628 I e calJac3.chr17 73850386 106 + 74750902 I e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e cerAty1.NW_012004056v1 16399737 53 - 16847902 I e panPan2.chrUn_NW_014024201v1 134461 864 - 190779 M a score=8778.000000 s hg38.chr3_KI270934v1_alt 72486 6 + 163458 aaaaaa s panTro5.chr3 2544756 6 - 202621043 aaaaaa i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 85488 6 - 106623 aataaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2949022 6 - 123690457 caaata i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2357195 5 - 204787373 -ataaa i rheMac8.chr2 C 0 I 327 s macFas5.chr2 192423508 6 - 192460366 aataaa i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91368676 5 + 91754291 -aTaat i chlSab2.chr15 C 0 I 23 s manLeu1.NW_012102020v1 1438887 5 + 1977891 -ataaa i manLeu1.NW_012102020v1 C 0 I 52 s colAng1.NW_012118932v1 7374598 6 - 7796314 aataaa i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17293654 6 - 17725628 CACAGG i saiBol1.JH378146 I 17 I 1 s otoGar3.GL873829 214708 3 + 608964 ---aaa i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14801543 665 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88396172 668 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e macNem1.NW_012014355v1 19161937 83 - 19675229 I e calJac3.chr17 73850386 106 + 74750902 I e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e cerAty1.NW_012004056v1 16399737 53 - 16847902 I e panPan2.chrUn_NW_014024201v1 134461 864 - 190779 M a score=1199.000000 s hg38.chr3_KI270934v1_alt 72492 8 + 163458 a-----taaatcc s panTro5.chr3 2544762 13 - 202621043 aatAAATAAATCA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 85494 11 - 106623 t--aaataaatcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2949028 13 - 123690457 aaTAAATAAATCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192423514 8 - 192460366 -----aCAAATCC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91368704 8 + 91754291 -----ataaaTCC i chlSab2.chr15 I 23 C 0 s colAng1.NW_012118932v1 7374604 8 - 7796314 -----ataaaTCC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17293661 12 - 17725628 -ATGGAGGGCTCT i saiBol1.JH378146 I 1 C 0 s otoGar3.GL873829 214711 3 + 608964 ----------tca i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14801543 665 - 22200726 I e mm10.chr16 32795241 1607 + 98207768 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88396172 668 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e macNem1.NW_012014355v1 19161937 83 - 19675229 I e calJac3.chr17 73850386 106 + 74750902 I e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e manLeu1.NW_012102020v1 1438892 52 + 1977891 I e cerAty1.NW_012004056v1 16399737 53 - 16847902 I e rheMac8.chr2 2357200 327 - 204787373 I e panPan2.chrUn_NW_014024201v1 134461 864 - 190779 M a score=-11886.000000 s hg38.chr3_KI270934v1_alt 72500 7 + 163458 ---ttttcta s panTro5.chr3 2544775 7 - 202621043 ---TTTTCTA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 85505 5 - 106623 ---ttttt-- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2949041 7 - 123690457 ---TTTTTTA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192423522 6 - 192460366 ---CCCCCT- i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91368712 4 + 91754291 ---CCCC--- i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7374612 5 - 7796314 ---CCCCC-- i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17293673 7 - 17725628 ---TTTTTTA i saiBol1.JH378146 C 0 I 2 s otoGar3.GL873829 214714 4 + 608964 ---tctg--- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32796848 7 + 98207768 ttatcta--- i mm10.chr16 I 1607 C 0 e proCoq1.NW_012133858v1 14801543 665 - 22200726 I e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88396172 668 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e macNem1.NW_012014355v1 19161937 83 - 19675229 I e calJac3.chr17 73850386 106 + 74750902 I e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e manLeu1.NW_012102020v1 1438892 52 + 1977891 I e cerAty1.NW_012004056v1 16399737 53 - 16847902 I e rheMac8.chr2 2357200 327 - 204787373 I e panPan2.chrUn_NW_014024201v1 134461 864 - 190779 M a score=2955.000000 s hg38.chr3_KI270934v1_alt 72507 1 + 163458 t s panTro5.chr3 2544782 1 - 202621043 T i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2949048 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2357527 1 - 204787373 T i rheMac8.chr2 I 327 C 0 s macNem1.NW_012014355v1 19162020 1 - 19675229 T i macNem1.NW_012014355v1 I 83 C 0 s cerAty1.NW_012004056v1 16399790 1 - 16847902 T i cerAty1.NW_012004056v1 I 53 C 0 s chlSab2.chr15 91368716 1 + 91754291 T i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7374617 1 - 7796314 T i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 14802208 1 - 22200726 T i proCoq1.NW_012133858v1 I 665 C 0 s otoGar3.GL873829 214718 1 + 608964 t i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32796855 1 + 98207768 t i mm10.chr16 C 0 C 0 e aotNan1.NW_018503669v1 21331 28 + 69927 I e micMur3.chr1 88396172 668 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e saiBol1.JH378146 17293680 2 - 17725628 I e calJac3.chr17 73850386 106 + 74750902 I e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e manLeu1.NW_012102020v1 1438892 52 + 1977891 I e macFas5.chr2 192423528 0 - 192460366 C e gorGor5.CYUI01000576v1 85510 0 - 106623 C e panPan2.chrUn_NW_014024201v1 134461 864 - 190779 M a score=8281.000000 s hg38.chr3_KI270934v1_alt 72508 1 + 163458 t s panTro5.chr3 2544783 1 - 202621043 T i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2949049 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2357528 1 - 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192423528 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162021 1 - 19675229 T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16399791 1 - 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91368717 1 + 91754291 T i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1438944 1 + 1977891 T i manLeu1.NW_012102020v1 I 52 C 0 s colAng1.NW_012118932v1 7374618 1 - 7796314 T i colAng1.NW_012118932v1 C 0 C 0 s micMur3.chr1 88396840 1 + 114275543 T i micMur3.chr1 I 668 C 0 s proCoq1.NW_012133858v1 14802209 1 - 22200726 T i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 214719 1 + 608964 t i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32796856 1 + 98207768 t i mm10.chr16 C 0 C 0 e aotNan1.NW_018503669v1 21331 28 + 69927 I e dasNov3.JH569502 2708474 8458 - 6579706 I e saiBol1.JH378146 17293680 2 - 17725628 I e calJac3.chr17 73850386 106 + 74750902 I e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e gorGor5.CYUI01000576v1 85510 0 - 106623 C e panPan2.chrUn_NW_014024201v1 134461 864 - 190779 M a score=25031.000000 s hg38.chr3_KI270934v1_alt 72509 4 + 163458 tttt-- s panTro5.chr3 2544784 4 - 202621043 TTTT-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135325 4 - 190779 TTTC-- i panPan2.chrUn_NW_014024201v1 M 864 C 0 s gorGor5.CYUI01000576v1 85510 4 - 106623 ttaa-- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2949050 4 - 123690457 TTTT-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2357529 4 - 204787373 TTTT-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192423529 4 - 192460366 TTTT-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162022 4 - 19675229 TTTT-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16399792 4 - 16847902 TTTT-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91368718 4 + 91754291 TTTT-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1438945 4 + 1977891 TTTT-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7374619 4 - 7796314 TTTT-- i colAng1.NW_012118932v1 C 0 C 0 s micMur3.chr1 88396841 4 + 114275543 TTTT-- i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14802210 4 - 22200726 TTTT-- i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 214720 4 + 608964 tttt-- i otoGar3.GL873829 C 0 I 3 s mm10.chr16 32796857 4 + 98207768 --TTAA i mm10.chr16 C 0 C 0 e aotNan1.NW_018503669v1 21331 28 + 69927 I e dasNov3.JH569502 2708474 8458 - 6579706 I e saiBol1.JH378146 17293680 2 - 17725628 I e calJac3.chr17 73850386 106 + 74750902 I e cebCap1.NW_016107444v1 6383844 28 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I a score=1233778.000000 s hg38.chr3_KI270934v1_alt 72513 93 + 163458 aaTGTATGTGATGAGTTTGGCACAACTCCTATTAGCGACAGGTCAGGGTTCATTCCCGTCTTTCACAAAAGCCCTGCCTG--TCAGCATCCACCC s panTro5.chr3 2544788 93 - 202621043 AATGTATGTGATGAGTTTGGCACAACTCCTATTAGCGACAGGTCAGGGTTCATTCCCGTCTTTCACAAAAGCCCTGCCTG--TCAGCATCCACCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135329 93 - 190779 AATGTGTGTGATGAGTTTGGCACAACTCCTATTAGCGACAGGTCAGGGTTCATTCCCGTCTTTCACAAAAGCCCTGCCTG--TCAGCATCCACCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 85514 93 - 106623 aaTGTATGTGATGAGTTTGGCACAACTCCTATTAGTGACAGGTCAGGGTTCATTCCCATCTTTCACAAAAGCCCTGCCTC--TTAGCATCCACCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2949054 93 - 123690457 AATGTATGTGATGAGTTTGGCACAACTCCTATTAACGACAGGTCAGGGTTCGTTCCCGTCTTTCACAAAAGCCCTGCCTC--TCAGCATCCACTC i nomLeu3.chr11 C 0 T 90437 s rheMac8.chr2 2357533 93 - 204787373 AATGTATGTGATGAGTTTGGCACAGCTCCTATTAACGACAGGTCAGGGTTCCTTCCCATCTTTCACAAAAGCCCTGCCTC--TCAGCATCCACCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192423533 93 - 192460366 AATGTATGTGATGAGTTTGGCACAGCTCCTATTAACGACAGGTCAGGGTTCCTTCCCATCTTTCACAAAAGCCCTGCCTC--TCAGCATCCACCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162026 93 - 19675229 AACGTATGTGATGAGTTTGGCACAGCTCCTATTAACGACAGGTCAGGGTTCCTTCCCGTCTTTCACAAAAGCCCTGCCTC--TCAGCATCCACCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16399796 93 - 16847902 AATGTATGCGATGAGTTTGGCACAGCTCCTATTAACGACAGGTCAGGGTTCCTTCCCGTCTTTCACAAAAGCCCTGCCTC--TCAGCATCCACCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91368722 93 + 91754291 AACGTATGTGATGAGTTTGGCACAGCTCCTATTAGCGACAGGTCAGGGTTCGTTCCCGTCTTTCACAAAAGCCCTGCCTC--TCAGCATCCACCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1438949 93 + 1977891 AATGTATGTGATGAGTTTGGCACAGCTCCTATTAACGACAGGTCAGGGTTCCTTCCCGTCTTTCACAAAAGCCCTGCCTC--TCAGCATCCACCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7374623 93 - 7796314 AATGTATGTGATGAGTTTGGCACAACTCCTATTAGCGACAGGTCAGGGTTCGTTCCCGTCCTTCACAAAAGCCCTGCCTC--TCAGCATCCACCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73850492 90 + 74750902 AATGTATGTGATTAGTTTGACACAA---GTATCAGTCACAGATCAGTGTTAGTTCCCGTCTTTCTCAGAAGCCCTGCCTC--TCAGCATTCACCC i calJac3.chr17 I 106 C 0 s saiBol1.JH378146 17293682 90 - 17725628 AATGTATGTGATTAGTTTGGCACAA---CTATTAGTGACAGATCAATGCTAGTTCCTGTCTTTCTCAAAAGCCCTGCCTC--TCAGCACCCACCC i saiBol1.JH378146 I 2 C 0 s cebCap1.NW_016107444v1 6383872 89 + 6778120 AATGTATGTGATTAGTTTGGCACAA----TATTAGTGACAGATCAGTGTTAGTTCCCGTCTTTCTCAAAAGCCCTGCCTC--TCAGCATCCACCC i cebCap1.NW_016107444v1 I 28 C 0 s aotNan1.NW_018503669v1 21359 90 + 69927 AATGTATGTGATTAGTTTGGCACAA---CTATTAGCGACAGATCAATGTTAGTTCCCGTCTTTCTCAAAAGCCCTGCCTC--TCAGCATCCACGC i aotNan1.NW_018503669v1 I 28 C 0 s micMur3.chr1 88396845 95 + 114275543 AATGTATGTGACAAGTTTGGCACAGTTCCTACTAGCGACAGATCAGTGTCTGTTCTCTTTTTTCATAAAAGTCCTGCCTCTCTCAGCATCCACCC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14802214 95 - 22200726 AATGTATGTGACAAGTTTGGCACAGTTCCTACTAGCGACAGATCAGCGTTTGTTCTCTTCTTTTATAAAAGTCCTGCCTCTCTCAGCATCCACCC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 214727 92 + 608964 aaTACTTGTGACAAGTTTGGCCCAGTGCCTACTACTGACAGAACAGTGTTTGCTC---TTTTTCATAAAAGCCCTGCCTCTTTCAGTGTCCACCC i otoGar3.GL873829 I 3 C 0 s mm10.chr16 32796861 93 + 98207768 AGTGTGTGTGATAGGTTTGGCACAGTGCCAGTTAGTAACAGATCACGGTTAGCTCCCATCTTTCAGAAAAGT-CTGCCTCTCTCAGAATCTCCC- i mm10.chr16 C 0 C 0 e dasNov3.JH569502 2708474 8458 - 6579706 I e canFam3.chr33 2329403 5697 - 31377067 I a score=231762.000000 s hg38.chr3_KI270934v1_alt 72606 14 + 163458 TTCCCAAGCAGTTT s panTro5.chr3 2544881 14 - 202621043 TTCCCAAGCAGTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135422 14 - 190779 TTCCCAAGCAGTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 85607 14 - 106623 TTCCCAAGCAGTTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2858710 14 - 123690457 TTCCCAAGCAGTTT i nomLeu3.chr11 T 90437 C 0 s rheMac8.chr2 2357626 14 - 204787373 TTCCCAAGCAGTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192423626 14 - 192460366 TTCCCAAGCAGTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162119 14 - 19675229 TTCCCAAGCAGTTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16399889 14 - 16847902 TTCCCAAGCAGTTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91368815 14 + 91754291 TTCCCAAGAAGTTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439042 14 + 1977891 TTCCCAAGCAGTTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7374716 14 - 7796314 TTCCCAAGCAGTTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73850582 14 + 74750902 TTCCCCAGCAGTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17293772 14 - 17725628 TTCCAAAGCAGTTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6383961 14 + 6778120 TTCCCAAGCAGTTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 21449 14 + 69927 TTCCCAAGCAGTTT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88396940 14 + 114275543 TTCCCAAGCAGTTT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14802309 14 - 22200726 TTCCCAAGCAGTTT i proCoq1.NW_012133858v1 C 0 I 228 s otoGar3.GL873829 214819 14 + 608964 TTCCCAAGCAGTTT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32796954 14 + 98207768 CGCCCAAGCAGTTT i mm10.chr16 C 0 C 0 e dasNov3.JH569502 2708474 8458 - 6579706 I e canFam3.chr33 2329403 5697 - 31377067 I a score=269955.000000 s hg38.chr3_KI270934v1_alt 72620 31 + 163458 GTGGCAGTTG------------GACTTTTCACACGA--AATCTGT s panTro5.chr3 2544895 31 - 202621043 GTGGCAGTTG------------GACTTTTCACACGA--AATCTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135436 31 - 190779 GTGGCAGTTG------------GACTTTTCACACGA--AATCTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 85621 31 - 106623 GTGGCAGTTG------------GACTTTTCACACGA--AATCTGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2858724 31 - 123690457 GTGGCAGTTG------------GACTTTTCACACGA--AATCTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2357640 31 - 204787373 GTGGTAGTCG------------GACTTTTCACTCGG--AATCTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192423640 31 - 192460366 GTGGTAGTCG------------GACTTTTCACTCGG--AATCTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162133 31 - 19675229 GTGGTAGTTG------------GACTTTTCACTCGG--AATCTGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16399903 31 - 16847902 GTGGTAGTCG------------GACTTTTCACTCGG--AATCTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91368829 31 + 91754291 GTGGTAGTCG------------GACTTTTCACTCGG--AATCTGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439056 31 + 1977891 GTGGTAGTCG------------GACTTTTCACTCGG--AATCTGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7374730 31 - 7796314 GTGGTAGTCG------------GACTTTTCACTCCA--TATCTGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73850596 31 + 74750902 GTGACAGTCG------------ACCTTTTCGCACGA--AATCTGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17293786 31 - 17725628 GTGACAGCCG------------ACCTCTTCACACGA--AATCTGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6383975 31 + 6778120 GTGACGGTCG------------ACCTTTTCACACGA--AATCTGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 21463 43 + 69927 GTGACAGTCGACCCTAACCCTAACCTTTTCACACGA--ACTCTGT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88396954 16 + 114275543 -------------------------TTCTCACAC----AAGCTGT i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 214833 29 + 608964 GTGAGA----------------GACTGTTCACATAGTGAGACTGT i otoGar3.GL873829 C 0 I 320 s mm10.chr16 32796968 27 + 98207768 GTGACA----------------AACTTTTCATTCAA--AAGGCAA i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14802323 228 - 22200726 I e dasNov3.JH569502 2708474 8458 - 6579706 I e canFam3.chr33 2329403 5697 - 31377067 I a score=1200457.000000 s hg38.chr3_KI270934v1_alt 72651 100 + 163458 ATTTTGAAGGAAATCCATGCTAGGTAATAAACTGGGAGGAGTCAGAATCTTGTTAAGCCACATTCTTCAGCTTTCTGCACAATGATCACCAGCTGGCACC s panTro5.chr3 2544926 100 - 202621043 ATTTTGAAGGAAATCCATGCTAGGTAATAAACTGGGAGGAGTCAGAATCTTGTTAAGCCACATTCTTCAGCTTTCTGCACAATGATCACCAGCTGGCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135467 100 - 190779 ATTTTGAAGGAAATCCATGCTAGGTAATAAACTGGGAGGAGTCAGAATCTTGTTAAGCCACATTCTTCAGCTTTCTGCACAATGATCACCAGCTGGCACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 85652 100 - 106623 ATTTTGAAGGAAATCCATGCTAGGTAATAAACTTAGAGGAGTCAGAATCTTGTTAAGCCACATTCTTCAGCTTTCTGCACAATGATCACCAGCTGGCACC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2858755 100 - 123690457 ATTTTGAAGGAAATCCATGCTAGGTAATACACTTGGAGGAGTCAGAATCTTGTTAAGCCACATTCTTCAGCTTTCTGCACAATGATCACCAGCTGGCACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2357671 100 - 204787373 ATTTTGAAGGAAATCCATGCCAGGTAATAAACTTGGAGGAGTCCGAATCTTGTTGAGCCACATTCTTCAGCTTTCTGCACAATGATCGCCAGCTGGCACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192423671 100 - 192460366 ATTTTGAAGGAAATCCATGCCAGGTAATAAACTTGGAGGAGTCCGAATCTTGTTGAGCCACATTCTTCAGCTTTCTGCACAATGATTGCCAGCTGGCACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162164 100 - 19675229 ATTTTGAAGGAAATCCATGCCAGGTAATAAACTTGGAGGAGTCCAAATCTTGTTGAGCCACATTCTTCAGCTTTCTGCACAATGATCGCCAGCTGGCACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16399934 100 - 16847902 ATTTTGAAGGAAATCCATGCCAGGTAATAAACTTGGAGGAGTCCGAATCTTGTTGAGCCACATTCTTCAGCTTTCTGCACAATGATCGCCAGCTGGCACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91368860 100 + 91754291 ATTTTGAAGGAAATCCATGCCAGGTAATAAACTTGGAGGAGTCCAAATCTTGTTGAGCCACATTCTTCAGCTTTCTGCACAATGATCGCCAGCTGGCACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439087 100 + 1977891 ATTTTGAAGGAAATCCATGCCAGGTAATAAACTTGGAGGAGTCCGAATCTTGTTGAGCCACATTCTTCAGCTTTCTGCACAATGATCGCCAGCTGGCACC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7374761 97 - 7796314 ATTTTGAAGGAAATCCATGCCAGGTAATAAACTT---GGAGTCCGAATCTTGTTGAGCCACATTCTTCAGCTTTCTGCACAATGATCACCAGCTGGCACC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73850627 100 + 74750902 ATTTTGAAGGAGATCCATGCCAGGTAATAAACTTCGAGGAGTTAGAATGTTGTTAAGCCGCATTCTTCAGCTGTCTGCAAAATGATGACCAGCCGGCCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17293817 100 - 17725628 ATTGTGAAGGAGATCCATGCTAGGGAATAAACTTACAGAAGTCAGAATCTTGTTAAGCCGCATTCTTCAGCTTTCTGCAAAATGATCGCCAGCCGGCCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6384006 99 + 6778120 GTTTTGAAGGAGATCCATGCTAGGTAAT-ACCTTAGAGGAGTCAGAATCTTGTTAAGCCACATTCTTCAGGTTTCTGCAAAATGATCACCCGCCGGCCCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 21506 100 + 69927 ATTTTGAAGGAGATCCATGCCGGGTAATAAACTTAGAGGCGTCAGAATCCTGTTAAGCTGCATTCTTCAGCCTTCTGCAAAATGACCACCAGCCGGCCCC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88396970 97 + 114275543 ACTTTGAAGGAGAT--GTGCTAGGTAATAAACTCAGAGGAGTCACTATCTTGTTAAGCTACCTTCTTCAGCTTCA-GCAGAATTATCACCAGCTGACACC i micMur3.chr1 C 0 I 344 s otoGar3.GL873829 215182 100 + 608964 ACTTTGAAGAAAATCCACTCTAGGTACTAAACTCAGAGGACTCAGAATCTTGTTAAGCCACATTCTTCAGCTTTAGGCAGAATTATCACCAGCTGACACT i otoGar3.GL873829 I 320 C 0 s mm10.chr16 32796995 71 + 98207768 ATTTCAAAGAACAGCTGGGCTAGGTAACGATGTTGGAGGGAGCAGAGC-----------------------------TAAAATGATCACCAGCTGGCATC i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14802323 228 - 22200726 I e dasNov3.JH569502 2708474 8458 - 6579706 I e canFam3.chr33 2329403 5697 - 31377067 I a score=496020.000000 s hg38.chr3_KI270934v1_alt 72751 138 + 163458 TCCCTGCA--CCCCCGCTCCGTGCCCCA-CTTACTGTCCCACGTTCATAAACAGAAACTC---TCAGCCA-C----------------CCCTTACGATGGCAGCGTCATGTTTGATTAGTGTGTACTGCAGCGCCAG-GCACGCTTACACT--CACACACATCG s panTro5.chr3 2545026 138 - 202621043 TCCCTGCA--CCCCCGCTCCGTGCTCCA-CTTACTGTCCCACGTTCATAAAGACAAACTC---TCAGCCA-C----------------CCCTTACGATGGCAGCGTCATGGTTGATTAGTGTGTACTGCAGCGCCAG-GCATGCTTACACT--CACACACACCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135567 139 - 190779 TCCCTGCA--CCCCCGCTCCATGCTCCA-CTTACTGTCCCACGTTCATAAAGACAAACTC---TCAGCCACC----------------CCCTTACGATGGCAGCGTCATGGTTGATTAGTGTGTACTGCAGCGCCAG-GCACGCTTACACT--CACTCACACCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 85752 140 - 106623 TCCCTGCAACCCCACGCTCCATGCCCCA-CTTACTGTCCCACGTTCATAAAGACAAACTC---TCAGCCA-C----------------CCCTTACGATGGCAGCGTCATGGTTGATTAGTGTGTACTGCAGCGCCAG-GCATGCTTACACT--CACACACACCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2858855 138 - 123690457 TCCCTGCA--CCCCGGCTCTGTGCCCCA-CTTACTCTCCCACGTTCATAAGGACAAACTC---TCAGCCA-C----------------CCCTTACGATGGCAGCGTCATGGTTGATTAGTGTGTACTGCAGCGCCAG-GCACCCTTACGCT--CACACACACCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2357771 99 - 204787373 TCCCTGCA--CCCAC-CTCCCCACCCCA-CTCACTCT-CCACGTTCATAAAGGCAGACTC---TCAGCCA-C----------------CTCTCACCATG----------------------------GCAGCGCCAG-GCAGGCTTACACT--CA--------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192423771 99 - 192460366 TCCCTGCA--CCCAC-CTCCCCACCCCA-CTCACTCT-CCACGTTCATAAAGGCAGACTC---TCAGCCA-C----------------CTCTCACCATG----------------------------GCAGCGCCAG-GCAGGCTTACACT--CA--------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162264 99 - 19675229 TCCCTGCA--CCCAC-CTCCCCGCCCCA-CTCACTCT-CCACGTTCTTAAAGGCAGACTC---TCAGCCA-C----------------CTCTCACCATG----------------------------GCAGCGCCAG-GCAGGCTTACACT--CA--------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400034 99 - 16847902 TCCCTGCA--CCCGC-CTCCCCGCCCCA-CTCACTCT-CCACGTTCATAAAGGCAGACTC---TCAGCCA-C----------------CTCTCACCATG----------------------------GCAGTACCAG-GCAGGCTTACACT--CA--------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91368960 99 + 91754291 TCCCTGCA--CCCAC-CTCCCCGCCCCA-CTCACTCT-CCACGTTCATAAAGGCAGACTC---TCAGCCA-C----------------CTCTCACCATG----------------------------GCAGCGCCAG-GCAGGCTTACACT--GA--------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439187 99 + 1977891 TCCCTGCA--CCCAC-CTCCCCGCCCCA-CTCACTCT-CCACGTTCATAAAGGCAGACTC---TCAGCCA-C----------------CTCTCACCATG----------------------------GCAGCGCCAG-GCAGGCTTACACT--CA--------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7374858 101 - 7796314 TCCCTGCA--CCCAC-CTCCCCGCCCCA-CTCACTCT-CCACGTTCATAAAGACAGACTC---TCAGCCA-C----------------CTCTTACCATG----------------------------GCGGCGCCAT-GCAGGCTTATACTCACA--------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73850727 113 + 74750902 TCCCTGCA--CCCCGCTTCCTCG--------------CCCACATT--CTAACAGCAACCCCGTGCAATGG-CAGCGTCACGGTTTATTTGTGTGTGCT-----------------------------GCGGCGCCAT-GCACGCTTACACT--GATACAAACCA i calJac3.chr17 C 0 T 56 s saiBol1.JH378146 17293917 118 - 17725628 TCCCTGCA--CCCCGCTTCCCCGCCAGA-CCTGCCCTCCCACATTCACAAACACGAGCTC---ACAGTGG-CGGTGCCGCGGTTTATCTGCGTGTACT-----------------------------GCAGTGCCCT-GCACGCTTACACT--GACA------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6384105 83 + 6778120 TCCCTGCA--CCCCGCTTCCTGGCCGCA-CTTACTCTCCCACATTCATAAACACAAACTC---ACAGCGA-C----------------CCCGTGCAATG----------------------------GCAGAGC------------------------------ i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 21606 95 + 69927 TCCCCGCA--CCCCGCTTCCCCGCCACA-CCTACCCTCCCACATTCATAAACACAAGCTC---ACAGCGA-C----------------CCCGTGCAATG----------------------------GCAGCACCACGGTTCGCTC------------------ i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 215282 107 + 608964 TCCCTGCC--CC----TTCCCAACCCCA-ATTA------------CGTAAAGGCAAACTC---AGAGCGA-T--------------------------GACAACATCATTGTTCGTTTGTGTGTACTTCAGTGTCCT-GCATGCTTAAACT--GACACA----- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32797066 105 + 98207768 -TCCCAAG--CCC---CTCCTCCCTCCACCCCACTATCCCATGAC--TAAAGAGTGACTC---CCAGAC--T----------------CCCTTACAGTGATGGCC----------------------ACAGGGCCAC--CATGTGTAAGCT--GACCCAT---- i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14802323 228 - 22200726 I e micMur3.chr1 88397067 344 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e canFam3.chr33 2329403 5697 - 31377067 I a score=27685.000000 s hg38.chr3_KI270934v1_alt 72889 18 + 163458 TCATGGTTGATTAGTGTG s panTro5.chr3 2545164 18 - 202621043 TCATGGTTGATTAGTGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135706 18 - 190779 TCATGGTTGATTAGTGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 85892 18 - 106623 TCATGGTTGATTAGTGTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2858993 18 - 123690457 TCATGGTTGATTAGTGTG i nomLeu3.chr11 C 0 I 112 s calJac3.chr17 73850784 18 + 74750902 TCACGGTTTATTTGTGTG i calJac3.chr17 T 56 C 0 s cebCap1.NW_016107444v1 6384188 17 + 6778120 -CACGGTTTAGTTGTGTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 21701 5 + 69927 -------------GCGTG i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 14802323 228 - 22200726 I e mm10.chr16 32797171 0 + 98207768 C e micMur3.chr1 88397067 344 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e macNem1.NW_012014355v1 19162363 0 - 19675229 C e saiBol1.JH378146 17294035 0 - 17725628 C e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 215389 0 + 608964 C e colAng1.NW_012118932v1 7374959 0 - 7796314 C e manLeu1.NW_012102020v1 1439286 0 + 1977891 C e chlSab2.chr15 91369059 0 + 91754291 C e cerAty1.NW_012004056v1 16400133 0 - 16847902 C e macFas5.chr2 192423870 0 - 192460366 C e rheMac8.chr2 2357870 0 - 204787373 C a score=53741.000000 s hg38.chr3_KI270934v1_alt 72907 27 + 163458 TACTGCAGCGCCATGCACGCTTACACT s panTro5.chr3 2545182 27 - 202621043 TACTGCAGTGCCATGCACGCTTACACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135724 27 - 190779 TACTGCAGTGCCATGCACGCTTACACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 85910 23 - 106623 TACTGCAGCGCCAGGCATGCTTA---- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859123 27 - 123690457 TACTGCAGCGCCAGGCACGCTTACACT i nomLeu3.chr11 I 112 C 0 s calJac3.chr17 73850802 27 + 74750902 TGCTGCGGCGCCATGCACGCTTACACT i calJac3.chr17 C 0 I 11 s cebCap1.NW_016107444v1 6384205 27 + 6778120 TACTGCAGCGCCGTGCACGCTTACACT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 21706 27 + 69927 TACTGCAGCGCCGTGCGCGCTTACACT i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32797171 21 + 98207768 --CTGCCA-GCCA-GCACACTCGTC-- i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14802323 228 - 22200726 I e micMur3.chr1 88397067 344 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e macNem1.NW_012014355v1 19162363 0 - 19675229 C e saiBol1.JH378146 17294035 0 - 17725628 C e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 215389 0 + 608964 C e colAng1.NW_012118932v1 7374959 0 - 7796314 C e manLeu1.NW_012102020v1 1439286 0 + 1977891 C e chlSab2.chr15 91369059 0 + 91754291 C e cerAty1.NW_012004056v1 16400133 0 - 16847902 C e macFas5.chr2 192423870 0 - 192460366 C e rheMac8.chr2 2357870 0 - 204787373 C a score=3236.000000 s hg38.chr3_KI270934v1_alt 72934 4 + 163458 CACT s panTro5.chr3 2545209 4 - 202621043 CACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135751 4 - 190779 CACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 85933 4 - 106623 CACT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859150 4 - 123690457 CACA i nomLeu3.chr11 C 0 C 0 s cebCap1.NW_016107444v1 6384232 4 + 6778120 GACA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 21733 4 + 69927 GACA i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32797192 4 + 98207768 TATT i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14802323 228 - 22200726 I e micMur3.chr1 88397067 344 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e macNem1.NW_012014355v1 19162363 0 - 19675229 C e saiBol1.JH378146 17294035 0 - 17725628 C e calJac3.chr17 73850829 11 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 215389 0 + 608964 C e colAng1.NW_012118932v1 7374959 0 - 7796314 C e manLeu1.NW_012102020v1 1439286 0 + 1977891 C e chlSab2.chr15 91369059 0 + 91754291 C e cerAty1.NW_012004056v1 16400133 0 - 16847902 C e macFas5.chr2 192423870 0 - 192460366 C e rheMac8.chr2 2357870 0 - 204787373 C a score=62337.000000 s hg38.chr3_KI270934v1_alt 72938 6 + 163458 CACACT- s panTro5.chr3 2545213 6 - 202621043 CACACC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135755 6 - 190779 CACACC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 85937 6 - 106623 CACACC- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859154 6 - 123690457 CACACC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2357870 6 - 204787373 CACACC- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192423870 6 - 192460366 CACACC- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162363 6 - 19675229 CACACC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400133 6 - 16847902 CACACC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91369059 6 + 91754291 CACACC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439286 6 + 1977891 CACACC- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7374959 6 - 7796314 CACACC- i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17294035 6 - 17725628 CACACC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6384236 6 + 6778120 CACACC- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 21737 6 + 69927 CAAACC- i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14802551 6 - 22200726 CACACT- i proCoq1.NW_012133858v1 I 228 C 0 s otoGar3.GL873829 215389 6 + 608964 CACATC- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32797196 6 + 98207768 -CCTCCG i mm10.chr16 C 0 C 0 e micMur3.chr1 88397067 344 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e calJac3.chr17 73850829 11 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I a score=366541.000000 s hg38.chr3_KI270934v1_alt 72944 41 + 163458 GTCATTTGCACACTCTTTATCAACAATAATAGCACTTCACA s panTro5.chr3 2545219 41 - 202621043 GTCATTTGCACACTCTTTATCAACAATAATAGCACTTCACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135761 41 - 190779 GTCATTTGCACACTCTTTATCAACAATAATAGCACTTCACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 85943 41 - 106623 GTCATTTGCACACTCTTTATCAACAATAATAGCACTTCACA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859160 41 - 123690457 GTCATTTGCACACTTTTTATCATCAATAATAGCACTTCACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2357876 41 - 204787373 GCCATCCGCACACTCTTTATCATCAACGATGGCACTTCACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192423876 41 - 192460366 GCCATCCGCACACTCTTTATCATCAACGATGGCACTTCACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162369 41 - 19675229 GCCATCCGCACACTCTTTATCATCAACGATGGCACTTCACA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400139 41 - 16847902 GCCATCCGCACACTCTTTATCATCAACGATGGCACTTCACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91369065 41 + 91754291 GTCATCCACACACTGTTTATCATCAACGATGGCACTTCACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439292 41 + 1977891 GCCATCCGCACACTCTTTATCATCAACGATGGCACTTCACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7374965 41 - 7796314 ATCATCCGCACACTCTTTATCATCAATGACAGCACTTCACA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73850840 37 + 74750902 ATTATTTGCACACTC----TGAACAGTAATAGCACTTTATG i calJac3.chr17 I 11 C 0 s saiBol1.JH378146 17294041 37 - 17725628 ATTATTTGCACACTC--CGTGAGCAATAAAAGCCCTTCA-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6384242 39 + 6778120 ATTATTTGCACACTC--TATGAACAATAATAGCACTTCACA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 21743 39 + 69927 ATTATCTGCACACTC--TATGAACAGTAATAGCCCTTCACG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14802557 41 - 22200726 GTCATTTGCGTACTCTCTATCAACAATAATGACACTTCACA i proCoq1.NW_012133858v1 C 0 I 121 s otoGar3.GL873829 215395 40 + 608964 AATATTTGCATACT-TTTATCAACAATAATGACACTTCACA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32797202 24 + 98207768 GCCATTAATACA------ATTAACAAAAAT----------- i mm10.chr16 C 0 C 0 e micMur3.chr1 88397067 344 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e canFam3.chr33 2329403 5697 - 31377067 I a score=956293.000000 s hg38.chr3_KI270934v1_alt 72985 125 + 163458 AGTAGCACTGTGGTTCATTATAATCAACCCGAGAGAGCCTGCCCTTGCCCATGAAGGGTGGCTCATACTGAAATTCACTCCCAGAGCCCTACTAGGGGAGAGGCCCACCAGGCCCTTCTAGGCCT s panTro5.chr3 2545260 124 - 202621043 GGTAGCACTGTGGTTCATTATAATCAACCCGAGAGAGCCTGCCCTTGCCCATGAAGGGTGGCTCATACTGAAATTCACTCCCAGAGCCCCCCTAGGGGAGAGGCCCACCAGGCCCCTCT-GGCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135802 124 - 190779 GGTAGCACTGTGGTTCATTATAATCAACCCGAGAGAGCCTGCCCTTGCCCATGAAGGGTGGCTCATACTGAAATTCACTCCCAGAGCCCCCCTAGGGGAGAGGCCCACCAGGCCCCTCT-GGCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 85984 125 - 106623 GGTAGCACTGTGATTCATTATAATCAACCCGAGAGAGCCTGCCCTTGCCCATGAAGGGCGGCTCATACTGAAATTCACACCCAGAGCCCCACTAGGGGAGAGGCCCACCAGGCCCTTCTAGGCCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859201 124 - 123690457 GGTAGCCCTGTGGTTCCTTATAATCAACCCGAGAGAGCCTGCCCTTGCCCGTGAAGGGTGGCTCATACTGAAATTCCCTCCCAGAGCCCCACTAGGGGAGAGGCCCACCAGGCCCCTCT-GGCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2357917 109 - 204787373 GGTAGCACTGTGGTTCCTTGTCACCAACCCAAGAGAGCCTGCCCTTGCC--------------CACACTGAAATTCACTCCCAGAGCCCCACGAGGGGGGAGGCCCACCA-GCCCCTCT-GGCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192423917 109 - 192460366 GGTAGCACTGTGGTTCCTTGTCACCAACCCAAGAGAGCCTGCCCTTGCC--------------CACACTGAAATTCACTCCCAGAGCCCCACGAGGGGGGAGGCCCACCA-GCCCCTCT-GGCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162410 109 - 19675229 GGTAGCACTGTGGTTCCTTGTCACCAACCCAAGAGAGCCTGCCCTTGCC--------------CACACTGAAATTCACTCCCAGAGCCCCACGAGGGGGGAGGCCCACCA-GCCCCTCT-GGCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400180 109 - 16847902 GGTAGCACTGTGGTTCCTTGTCACCAACCCAAGAGAGCCTGCCCTTGCC--------------CACACTGAAATTCACTCCCAGAGCCCCACGAGGGGGGAGGCCCACCA-GCCCCTCT-GGCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91369106 109 + 91754291 GGTAGCACTGTGGTTCCTTGTCATCAACCCAAGAGAGCCTGCCCTTGTC--------------CACACTGAAATTCACTCCCAGAGCCCCATGAGGGGAGAGGCCCACCA-GCCCCTCT-GGCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439333 109 + 1977891 GGTAGCACTGTGGTTCCTTGTCACCAACCCAAGAGAGCCTGCCCTTGCC--------------CACACTGAAATTCACTCCCAGAGCCCCACGACGGGGGAGGCCCACCA-GCCCCTCT-GGCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7375006 110 - 7796314 GGTAGCACCATGGTTCTTTATAATCAACCCAAGAGCGCCTGCCCTTGCC--------------CACACTGAAATTCACTCCCAGAGCCTCACGACGGGAGAGGCCCACCAGGCCCCTCT-GGCCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73850877 120 + 74750902 TGTAGCACTGTGGCTCATTCTAATCATCCT--GAGAGCCTACCC-TGCCCAGGAAAGGCTGCCCATACTGAAATTCACTCCCGGAGCCCCACTAGGGAAGAAGCCCACCA-GGAAGTCT-GGCCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17294078 111 - 17725628 --------CGTGGTTCATTCCAATCAACCC--GAGAGCCTACCC-TGCCCATGAAAGGCTGCCCATACTGAAATTCACTCCCGGA-CCCCACTAGGGAAGAAGCCCACCG-GGACGTCT-GGCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6384281 119 + 6778120 TGTAGCACTGTGGTCCATTCTAATCAACCC--GAGAGCCTGCCC-TGCCCATGAAAGGCTGCCCACACTGAAATTCACTCCCGGA-CCCCACTAGGAAAGAAGCCCACCA-GGACGTCT-GGCCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 21782 120 + 69927 TGTAGCACTGTGGTTCATTCTGATCAACCC--GAGATCCCACCC-TGCCCATGAAAGGCTGCCCATACTGAAATTCACTCCCGGAGCCCCACCAGGGAAGAAGCCCCCCA-GGACGTCT-GGCCT i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 215435 118 + 608964 TATAAAATTATAGTTAACTACAATTAACCCAAGAGAACATACCCTCACT----CACAGCTGCCCATCCTGAAACTCACACCCAGATCCTTGCCAGGGGAGAAGCCCA-CA-GCCCCTCA-TGCCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32797226 84 + 98207768 -----------------GTCTCCCTTGCCCACAAAGAGCTGTCTTTGCC--------------AGCACTGAAA------CCCAGAGCTCCACCAGGGAGGATCCCCGGGG-GCTGTCCT-GTT-- i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14802598 121 - 22200726 I e micMur3.chr1 88397067 344 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e canFam3.chr33 2329403 5697 - 31377067 I a score=377698.000000 s hg38.chr3_KI270934v1_alt 73110 31 + 163458 CCTTACCTGCAGAGCTCCCAGAGACCCCAAC s panTro5.chr3 2545384 31 - 202621043 CCTTACCTGCAGAGCTCCCAGAGACCCCAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135926 31 - 190779 CCTTACCTGCAGAGCTCCCAGAGACCCCAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 86109 31 - 106623 CCTTACCTGCAGAGCTCCCAGAGACCCCAAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859325 31 - 123690457 CCTTACCTGCAGAGCTCCCAGGGACCCCAAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2358026 31 - 204787373 CCTTACCTGCAGAGATCTCAGACACCGCAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192424026 31 - 192460366 CCTTACCTGCAGAGATCTCAGACACCGCAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162519 31 - 19675229 CTTTACCTGCAGAGATCTCAGACACCGCAAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400289 31 - 16847902 CCTTACCTGCAGAGATCTCAGACACCGCAAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91369215 31 + 91754291 CCTTACCTGCAGAGATCTCAGACACCGCAAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439442 31 + 1977891 CCTTACCTGCAGAGATCTCAGACACCGCAAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7375116 31 - 7796314 CCTTACCTGCAGAGCTCCCAGAGACTGCAAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73850997 31 + 74750902 CCTTACCTGCAGCACTCCCAGAGACCCCAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17294189 31 - 17725628 CCTTACCTGCAGCGCTCCCAGAGACCCCAGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6384400 31 + 6778120 CCTTACCTGCAGCGCTCCCAGAGACCCCAGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 21902 31 + 69927 CCTTACCTGCAGCGCTCCCAGAGACCCCAGC i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14802719 31 - 22200726 CCTCACCTGTGGAGCTGCCAGACAGCCCAGC i proCoq1.NW_012133858v1 I 121 C 0 s otoGar3.GL873829 215553 31 + 608964 CCTTACCTGCAGAGCTCCCAGACAGCCCAGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32797310 31 + 98207768 CCTTACCTGGAGAGCTCACACTGACGCCAAC i mm10.chr16 C 0 C 0 e micMur3.chr1 88397067 344 + 114275543 I e dasNov3.JH569502 2708474 8458 - 6579706 I e canFam3.chr33 2329403 5697 - 31377067 I a score=167059.000000 s hg38.chr3_KI270934v1_alt 73141 11 + 163458 CTCCCAGCAGA s panTro5.chr3 2545415 11 - 202621043 CTCCCAGCAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135957 11 - 190779 CTCCCAGCAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 86140 11 - 106623 CTCCCAGCAGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859356 11 - 123690457 CTCCCAGCAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2358057 11 - 204787373 CTCCCAGCAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192424057 11 - 192460366 CTCCCAGCAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162550 11 - 19675229 CTCCCAGCAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400320 11 - 16847902 CTCCCAGCAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91369246 11 + 91754291 CTCCCAGCAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439473 11 + 1977891 CTCCCAGCAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7375147 11 - 7796314 CTCCCAGCAGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73851028 11 + 74750902 CTCCCAGCAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17294220 11 - 17725628 CTCCCAGCAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6384431 11 + 6778120 CTCCCAGCAGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 21933 11 + 69927 CTCCCAGCAGA i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14802750 11 - 22200726 CTCCCAGCAGA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 215584 8 + 608964 GTTCCAGC--- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32797341 11 + 98207768 CTTCCAGCAGA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2716932 11 - 6579706 CTTCTAGCAGC i dasNov3.JH569502 I 8458 C 0 e micMur3.chr1 88397067 344 + 114275543 I e canFam3.chr33 2329403 5697 - 31377067 I a score=1755284.000000 s hg38.chr3_KI270934v1_alt 73152 149 + 163458 AGAAGAAAAGGGGCAGAGCCAGACCCCAGAGACAGCCCATCCTAG--------CCGGC---------CACCG-------CTGCTCCACAGAACTGCTG---GCTGTCTCTC-----G----CGGGTACCTTTTCCTGCTTCCTCAAACCAGGGA----GGAGGGGCA-GCCTCCTGCCCAGGTGTGTGA----------------------C s panTro5.chr3 2545426 149 - 202621043 AGAAGAAAAGGGGCAGAGCCAGACCCCAGAGAGAGCCCATCCTAG--------CCGGC---------CACCG-------CTGCTCCACAGAACTGCTG---GCTGTCTCTC-----G----CGGGTACCTTTTCCTGCTTCCTCAAACCAGGGA----GGAGGGGCA-GCCTCCTGCCCAGGTGTGTGA----------------------C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135968 149 - 190779 AGAAGAAAAGGGGCAGAGCCAGACCCCAGAGAGAGCCCATCCTAG--------CCGGC---------CACCG-------CCGCTCCACAGAACTGCTG---GCTGTCTCTC-----G----CAGGTACCTTTTCCTGCTTCCTCAAACCAGGGA----GGAGGGGCA-GCCTCCTGCCCAGGTGTGTGA----------------------C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 86151 169 - 106623 AGAAGAAAAGGGACAGAGTCAGACCCCAGAG--AGCCCATCCTAG--------CCGGC---------CACCG-------CCGCTCCACAGAACTGCTG---GCTGTCTCTC-----G----CGGGTACCTTTTCCTGCTTCCTCAAACCAGGGA----GGAGGGGCA-GCCTCCTGCCCAGGTGTGTGACTGAGTAGTTTCCAGGATGTGGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859367 153 - 123690457 AGAAGAAAAGAAGCAGAGTCAGACCCCAGAGACAGCCCATCCTAG--------TTGGC---------CACTG-------CTGCCCCACAGAACTGCTG---GCTGTCTCTC-----A----CGGGTACCTTTTCCTGCTTCCTCAAACCAGGGAGGAGGGAGGGGCA-GCCTCCTGCCCAGGTGTGTGG----------------------C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2358068 167 - 204787373 AGAAGAAAAGGGGCAGAGCCAGACCCCAGAGAGAGCCCATCCTAG--------CCGGC---------CACCG-------CTGCT--GCAGAACTGCTG---GCCG--TCTC-----A----CGGGTACCTTTTCCTGCTTCCTCAAGCCAGGGA----GGAGGGGCC-GCCTCCTGCCGAGGTGTGTGACTGGCTAGTTGCCAGGATGTGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192424068 167 - 192460366 AGAAGAAAAGGGGCAGAGCCAGACCCCAGAGAGAGCCCATCCTAG--------CCGGC---------CACCG-------CCGCT--GCAGAACTGCTG---GCCG--TCTC-----A----CGGGTACCTTTTCCTGCTTCCTCAAGCCAGGGA----GGAGGGGCC-GCCTCCTGCCGAGGTGTGTGACTGGCTAGTTGCCAGGATGTGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162561 167 - 19675229 AGAAGAAAAGGGGCAGAGCCAGACCCCAGAGAGAGCCCATCCTAG--------CCAGC---------CACCG-------CTGCT--GCAGAACTGCTG---GCCG--TCTC-----A----CGGGTACCTTTTCCTGCTTCCTCAAGCCAGGGA----GGAGGGGCC-GCCTCCTGCCGAGGTGTGTGACTGGCTAGTTGCCAGGATGTGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400331 167 - 16847902 AGAAGAAAAGGGGCAGAGCCAGACCCCAGAGAGAGCCCATCCTAG--------CCGGC---------CACCG-------CCGCT--GCAGAACTGCTG---GCCG--TCTC-----A----CGGGTACCTTTTCCTGCTTCCTCAAGCCAGGGA----GGAGGGGCC-GCCTCCTGCAGAGGTGTGTGACTGGCTAGTTGCCAGGATGTGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91369257 167 + 91754291 ATAAGAAAAGGGGCAGAGCCAGACCCCAGAGAGAGCCCATCCTAG--------CCGGC---------CACCA-------CCACT--GCAGAACTGCTG---GCTG--TCTC-----A----CGGGTACCTTTTCCTGCTTCCTCAAGCCAGGGA----GGAGGGGCC-ATCTCCTGCCGAGGTGTGTGACTGGCTAGTTGCCAGGATGTGGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439484 167 + 1977891 AGAAGAAAAGGGGCAGAGCCAGACCCCAGAGAGAGCCCATCCTAG--------CCGGC---------CACCG-------CCGCT--GCAGAACTGCTG---GCCG--TCTC-----A----CGGGTACCTTTTCCTGCTTCCTCAAGCCAGGGA----GGAGGGGCC-GCCTCCTGCCGAGGTGTGTGACTGGCTAGTTGCCAGGATGTGGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7375158 167 - 7796314 AGAAGAAAAGGGGCAGAGCCAGACCCCAGAGACGGCCCATCCTGG--------CCGGC---------CACCG-------CCACT--GCAGAACTGTGG---GCTG--TCTC-----A----CAGGTACCTTTTCCTGCTTCCTCAAGCCAGGGA----GGAGGGGCC-GCCTCCTGCCGAGGTGTGTGACTGGCTAGTTTGCAGGATGTGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73851039 160 + 74750902 AAAAGAAAAGGGGCAGAACCAGACCCCAGAGAGAGCCCATCCTAG--------CCAGG-----------------------GCGCTG----CCTG------------TCTCCGCAGACGGCCGGCCGCTTTTTCCTGCTTCCTTAAACCGGAGA----GGAGGGGCA-GCCTCCTGCCCAGGTGTGTGACTGGGGAGTTTCCGAGACGTAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17294231 170 - 17725628 AAAAGAAAAGGGGCAGAACCAGACCCCAGAGAGAGCCCATCCCGG--------CCGGGCG--AC----ACCA-------CTGCTCCGCAGACCTG------------TCTCCGCAGA----CGGCCGCCTTTTCCTGCTTCCTTAAACCGGAGA----GGAGGGGCC-GCCTCCCGCCCAGGCGTGCAACTGCAGAGTTTCTGAGGTGCAGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6384442 169 + 6778120 AAAAGAAAAGGGGCAGAAGCAGACCCCAGAGAGAGCCCATCCTGG--------CCGGGGC--AC---TGCCA-------CCGCTCCGCAGACCTG------------TCTTCGCAGA----GGGCCACCTTTTCCTGCTTCCTTAAACCGGAGA----GGAGAGGC--GCCTCCTGCCCAGGTGTGTGACTG-GGAGTTTCCGAGGTGTAGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 21944 172 + 69927 AAAAGAAAAGGGTCAGAAGCAGACCCCAGAGAGAGCCCATCCTAG--------CCAGGGC--GCCGCCGCCA-------CCGCTCCGCAGACCTG------------TCTCCGCAGA----CGGCCACCTTTTCCTGCTTCCTTAAACCGGAGA----GGAGGGGCA-GCCTTCTGCCCAGGTGTG--ACTGGGGAGTTTCCCAGACGCAGC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88397411 157 + 114275543 AGAAGAAAAGGGGCAGAGCCAGGCCCCAGAGAGAGCCCATCCCGGCTGGGGCACCAGC---------CACTG-------CCGCTCTGCAGACCTGCTT---GCTGCCTCTC----------TGGTCGCCTTTTCCTGTTTCCTCAACCCGGGGA----GGAGGGGCAGGCCTCCTGCCTGGGTGTGTGAC---------------------- i micMur3.chr1 I 344 I 39 s proCoq1.NW_012133858v1 14802761 155 - 22200726 ---AGAAAAGGGGCAGAGCCAGGCCCCAGAGAGAGCCCATCCTAGCCAGGGCGCTGGC---------CACCG-------CTGCTCTGCAGACCTGCTC---ACTGCCTCTC-----A----GGGCCACCTTTTCCTGTTTCCTCAACCCGGGGA----GGAGGGGCAGGCCTTCTGCCCAGGTGTATGGC---------------------- i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 215592 167 + 608964 AGAAGAGAAGGGGCAGGGCCAGGCCCCAGAGAGAGCCCATCCTAG-TGGGGCACAGGC---------TACTGGGCCCCACTGCTCTTCAGACCTGCTCACTGCTGCCTCTT-----A----GGGCCACCTTTTCCTGTTTCCTTGAGCCAGGGA----GGAGGGGCAGGCCTCCTGCCTAGATGTGTGAC---------------------- i otoGar3.GL873829 C 0 I 22 s mm10.chr16 32797352 175 + 98207768 AGACAAGGAGGGGCACAGCCAGGCCCCAGACAGAGCCCATCGTGC--------CTGGCCCTGAC---CACCG-------CTGTCTGCCGGACCTGCCT---GCTGTCTCTC-----C----TCACCACCCTTTCCTGCTTCCTCAACCCCGGGA----GGAGGGGCA-GACGACTGCCCAGGTGTG--ACTGGGTAGGTTCCAGGAGGCAGC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2716943 152 - 6579706 AAAAGAAAAGGGGTAGAGCCAGGCCCCAGAGAGAGCCCATCCTGG--------CTGTG----------------------------GCAGACGTGCCT---GCTGCGTCTC-----A----CTGAC----CTTCCTGCTTCCCCAGCCCAAGGA----GAAGGGCTGGGCCACCTGCCTG---GTGGGCCTGGGTAGTC-CCAGCATGCAGC i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 2329403 5697 - 31377067 I a score=5059.000000 s hg38.chr3_KI270934v1_alt 73301 5 + 163458 CAGGT s panTro5.chr3 2545575 5 - 202621043 CGGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136117 5 - 190779 CGGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 86320 5 - 106623 CAAGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859520 5 - 123690457 CAGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2358235 2 - 204787373 CA--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192424235 2 - 192460366 CA--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162728 2 - 19675229 CA--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400498 2 - 16847902 CA--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91369424 2 + 91754291 CA--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439651 2 + 1977891 CA--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7375325 2 - 7796314 CA--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73851199 5 + 74750902 CAGAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17294401 5 - 17725628 CAGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6384611 5 + 6778120 CAGGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 22116 5 + 69927 CAGGT i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14802916 5 - 22200726 CAGGT i proCoq1.NW_012133858v1 C 0 I 34 s otoGar3.GL873829 215781 5 + 608964 CAGGT i otoGar3.GL873829 I 22 C 0 s mm10.chr16 32797527 5 + 98207768 CGGGT i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2717095 5 - 6579706 CAGGT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88397568 39 + 114275543 I e canFam3.chr33 2329403 5697 - 31377067 I a score=65457.000000 s hg38.chr3_KI270934v1_alt 73306 7 + 163458 GATCACA s panTro5.chr3 2545580 7 - 202621043 GATCACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136122 7 - 190779 GATCACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 86325 7 - 106623 GATCACA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859525 7 - 123690457 GATCACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2358237 4 - 204787373 ---CACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192424237 4 - 192460366 ---CACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162730 4 - 19675229 ---CACA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400500 4 - 16847902 ---CACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91369426 4 + 91754291 ---CAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439653 4 + 1977891 ---CACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7375327 4 - 7796314 ---CACA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73851204 7 + 74750902 GATCAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17294406 7 - 17725628 GATCACA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6384616 7 + 6778120 GACCACA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 22121 7 + 69927 GATCACA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 215786 7 + 608964 GACCACA i otoGar3.GL873829 C 0 I 5 s mm10.chr16 32797532 7 + 98207768 GACCACA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2717100 7 - 6579706 GATCACA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14802921 34 - 22200726 I e micMur3.chr1 88397568 39 + 114275543 I e canFam3.chr33 2329403 5697 - 31377067 I a score=604831.000000 s hg38.chr3_KI270934v1_alt 73313 52 + 163458 AATGTGCAGGCTGAGGGCTGGCAGGTT--------GAGGCTGTCA-GCAAGCTGA-C-CCCCC s panTro5.chr3 2545587 51 - 202621043 AATGTGCAGGCTGAGGGCTGGCAGGTT--------GAGGCTGTCA-GCAAGCTGA---CCCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136129 52 - 190779 AATGTGCAGGCTGAGGGCTGGCAGGTT--------GAGGCTGTCA-GCAAGCTGA-C-CCCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 86332 37 - 106623 AATGTGCAGGC---------------T--------GAGGCTGTCA-GCAAGCTGA-C-CCCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859532 53 - 123690457 AATGTGCAGGCTGAGGGCTGGCAGGTT--------GAGGCTGTCA-GCAGGCTGACC-CCCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2358241 51 - 204787373 AATGTGCAGGCTGAGGGCTGGCAGGTT--------GAGGCTGTCA-GCAAGCTGA---CCCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192424241 51 - 192460366 AATGTGCAGGCTGAGGGCTGGCAGGTT--------GAGGCTGTCA-GCAAGCTGA---CCCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162734 51 - 19675229 AATGTGCAGGCTGAGGGCTGGCAGGTT--------GAGGCTGTCA-GCAAGCTGA---CCCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400504 51 - 16847902 AATGTGCAGGCTGAGGGCTGGCAGGTT--------GAGGCTGTCA-GCAAGCTGA---CCCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91369430 50 + 91754291 AATGTGCAGGCTGCGGGCTGGCAGGTC--------GAGTCTGTCA-GCAAGCTGA----CCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439657 51 + 1977891 AATGTGCAGGCTGAGGGCTGGCAGGTT--------GAGGCTGTCA-GCAAGCTGA---CCCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7375331 52 - 7796314 AATGTGCAGGCTGAGGGCTGGCAGGTT--------GAGGCTGTCA-GCAAGCTGA-C-CCCCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73851211 42 + 74750902 AACGTACA-----------GGCAGGTT--------GGGGCTGTCA-GCAAGCTAA-CACCCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17294413 51 - 17725628 GACGTGCAGGCTGAGCGT-GGCAGGTT--------GGGGCTGTCA-GCACGCTGA-C-CCCGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6384623 50 + 6778120 GATGTGCAGGCTGAGCGT-GGCAGGCT--------GGGGCTGTCA-GCAA-CTGA-C-CCCCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 22128 52 + 69927 AATATGCAGGCTGAGCGTCGGCAGGTT--------GGGGCTGTCG-GCAAGCTGA-C-CCCCC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88397607 52 + 114275543 AATGTGCACGCTGAGAGCTGACAGGTT--------GGGGCTGTCA-GCAGGCTAA-C-CCTCC i micMur3.chr1 I 39 C 0 s proCoq1.NW_012133858v1 14802955 52 - 22200726 AATGTGCACGCTGAGAGCTGACAGGTT--------GGGGCTGTCA-GCAAGCTAA-C-TCCCC i proCoq1.NW_012133858v1 I 34 I 3784 s otoGar3.GL873829 215798 51 + 608964 AAAGTGCAGGTCGAGAACTGACAGGTT--------GGGGTTGTCA-GCAAGC-AA-C-CCTCC i otoGar3.GL873829 I 5 C 0 s mm10.chr16 32797539 43 + 98207768 AATGTGCAGGCTGA----CAGCAGGTT--------CATGGTCCCA------CTCC-C-CACCC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2717107 62 - 6579706 AATGCGCCGGCTAGGAGCTACCAGGTTAGGCGTCCAGGGCTCTCAGGCACGCTGC-CACCTCC i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 2329403 5697 - 31377067 I a score=36290.000000 s hg38.chr3_KI270934v1_alt 73365 2 + 163458 TG s panTro5.chr3 2545638 2 - 202621043 TG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136181 2 - 190779 TG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 86369 2 - 106623 TG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859585 2 - 123690457 TG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2358292 2 - 204787373 TG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192424292 2 - 192460366 TG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162785 2 - 19675229 TG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400555 2 - 16847902 TG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91369480 2 + 91754291 TG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439708 2 + 1977891 TG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7375383 2 - 7796314 TG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73851253 2 + 74750902 TG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17294464 2 - 17725628 TG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6384673 2 + 6778120 TG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 22180 2 + 69927 TG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88397659 2 + 114275543 TG i micMur3.chr1 C 0 I 4970 s otoGar3.GL873829 215849 2 + 608964 TG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32797582 2 + 98207768 TG i mm10.chr16 C 0 C 0 s dasNov3.JH569502 2717169 2 - 6579706 TG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e canFam3.chr33 2329403 5697 - 31377067 I a score=566054.000000 s hg38.chr3_KI270934v1_alt 73367 54 + 163458 CCTTCCTTGCCCGGTAAACACT--CCACTGAAATTTGATTTGAAGATATGGAATCA s panTro5.chr3 2545640 54 - 202621043 CCTTCCTTGCCTGGTAAACACT--CCACTGAAATTTGATTTGAAGATATGGAATCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136183 54 - 190779 CCTTCCTTGCCTGGTAAACACT--CCACTGAAATTTGATTTGAAGATATGGAATCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 86371 54 - 106623 CCTTCCTTGCCCAGTAAACACT--CCACTGAAATTTGATTTGAAGATGTGGAATCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859587 49 - 123690457 CCTTCCTTGCCTAGTAAA-------CACTGAAATTTGATTTGAAGATATGGAATCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2358294 54 - 204787373 CCTTGCTTGCCCAGTAAACACT--CCGCTGAAATTTGATTTGAAGATGTGGAATCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192424294 54 - 192460366 CCTTGCTTGCCCAGTAAACACT--CCGCTGAAATTTGATTTGAAGATGTGGAATCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162787 54 - 19675229 CCTTGCTTGCCCAGTAAACACT--CCGCTGAAATTTGATTTGAAGATGTGGAATCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400557 54 - 16847902 CCTTGCTTGCCGAGTAAGCACT--CCACTGAAATTTGATTTGAAGATGTGGAATCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91369482 54 + 91754291 CCTTCCTGGCCCAGTAAACACT--CGGCTGAAATTTGATTTGAAGATGTGGAATCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439710 54 + 1977891 CCTTGCTTGCCCAGTAAACACT--CCGCTGAAATTTGATTTGAAGATGTGGAATCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7375385 54 - 7796314 CCTTCCTGGCCCAGTAAACACT--CCACTGACATTTGATTTGAAGATGTGGAATCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73851255 54 + 74750902 CCTTCCTTGCCCAGTAATTTCT--CCTCTGAAATTTGATTTGAAGATATGAAATCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17294466 54 - 17725628 CCTTCCTTGCCCAGTAATTTCT--CCTCCGAAATTTGATTTGAAGATAGGAAATCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6384675 54 + 6778120 CCTTCCTTGCCCAGTAATTTCT--CCTCTGAAATTTGATTTGAAGATATGAAATCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 22182 54 + 69927 CCTTCCTTGCCCAGTAATTTCT--CCTCTGAAATTTGATTTGAAGAGATGAAATCA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 215851 41 + 608964 -CCCCTTTGCCCAGT--------------GAAGTTTGATTTGAGGATATGGAATCA i otoGar3.GL873829 C 0 I 3 s mm10.chr16 32797584 41 + 98207768 ACTCCCATGCCTTGC-----CT--C--------TCTGATTTGAAGATATGGCATCA i mm10.chr16 C 0 I 4922 s dasNov3.JH569502 2717171 56 - 6579706 CGCACCCTGCCCTGTGACTGCTACCCACTGACTTTGGGTTTGAAGAAATGGAACCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e micMur3.chr1 88397661 4970 + 114275543 I e canFam3.chr33 2329403 5697 - 31377067 I a score=23324.000000 s hg38.chr3_KI270934v1_alt 73421 2 + 163458 CT s panTro5.chr3 2545694 2 - 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136237 2 - 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 86425 2 - 106623 GT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859636 2 - 123690457 CT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2358348 2 - 204787373 CT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192424348 2 - 192460366 CT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162841 2 - 19675229 CT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400611 2 - 16847902 CT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91369536 2 + 91754291 CT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439764 2 + 1977891 CT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7375439 2 - 7796314 CT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73851309 2 + 74750902 CT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17294520 2 - 17725628 CT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6384729 2 + 6778120 CC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 22236 2 + 69927 CT i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 215895 2 + 608964 CT i otoGar3.GL873829 I 3 C 0 s dasNov3.JH569502 2717227 2 - 6579706 CT i dasNov3.JH569502 C 0 I 1617 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e micMur3.chr1 88397661 4970 + 114275543 I e canFam3.chr33 2329403 5697 - 31377067 I a score=361244.000000 s hg38.chr3_KI270934v1_alt 73423 58 + 163458 AGC-tt-------tttt----------ttttttttt--tgagatggagtcttgctctgtcacccaggctggagtgtac s panTro5.chr3 2545696 55 - 202621043 AGC-----------ttt----------ttttttttt--tgagatggtgtcttgctctgtcacccaggctggagtgtac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136239 54 - 190779 AGC------------tt----------ttttttttt--tgagatggagtcttgctctgtcacccaggctggagtgtac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 86427 52 - 106623 AGC------------------------ttttttttt--tgacatggagtctctctctgttgtccaggctggagtgtac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859638 53 - 123690457 AGC-------------t----------ttttttttt--tgacatggagtcttgctctgttgcccaggctggagtgtac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2358350 61 - 204787373 AGC-tt----ttttttt----------gtttgtttt--tgagatggagtctcgccctgtcgcccaggctggagtgtac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192424350 61 - 192460366 AGC-tt----ttttttt----------gtttgtttt--tgagatggagtctcgccctgtcgcccaggctggagtgcac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162843 65 - 19675229 AGC-tttttgtttgttt----------gtttgtttt--tgagatggagtctcgccctgtcgcccaggctggagtgtac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400613 60 - 16847902 AGC-tt----ttttttt-----------tttttttt--tgagatggggtctcgccctgtcgcccaggctggagtgcac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91369538 66 + 91754291 AGCtttttttttttttt----------ttttttttt--tgagatggagtctcgctctgtcgcccaggctggagtgtac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439766 65 + 1977891 AGC-ttttttgtttttg----------tttttgttt--tgagatggagtctcgccctgtcgcccaggctggagtgcac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7375441 67 - 7796314 AGC-ttttttttttttt----------ttttttttttgtgagctggagtctcgcgctgtcgcccaggctggagtgtac i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73851311 75 + 74750902 AGG-TTCCTGttgtttttggttttggggtttttttt--tgagatggagtctcgctctgtcgcccaggctggagtgcac i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17294522 75 - 17725628 AAG-TTCTTGTTGtttttgtttttggtggttttttc--tgagatggagtcgcgctctgtcgcccaggctggagtgcaC i saiBol1.JH378146 C 0 I 5171 s cebCap1.NW_016107444v1 6384731 75 + 6778120 AGG-ttcttgttgttttaggttttggtttttttttt--tgagatggagtctcgctctgtcgcccaggctagagtgcac i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 22238 59 + 69927 AGG-T---TGTTGCttttg-------------tttt--tgagatggagtctcgctgtgttgcccaggctggagtgcac i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 215897 2 + 608964 AC---------------------------------------------------------------------------- i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e canFam3.chr33 2329403 5697 - 31377067 I a score=869625.000000 s hg38.chr3_KI270934v1_alt 73481 114 + 163458 agtaatgagatctcagctcaatgaaacctcttcctcccgggatccaacaattctcctgcctcagcctctggagtagctgggattataggcgcgcaccaccacgtccggctaatt s panTro5.chr3 2545751 114 - 202621043 agtaatgagatctcagctcagtgaaacctcttcctcccgggatcaaacaattctcctgcctcagcctctggagtagctgggattacaggcgcgcaccatcacgcccagctaatt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136293 114 - 190779 agtaatgagatctcagctcagtgaaacctcttcctcccgggatcaaacaattctcctgcctcagcctctggagtagctgggattacaggcgcgcaccaccacgcccagctaatt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 86479 113 - 106623 agtagtgagatctcggctcattgaaacctcttcctcctgggatcaagcaattctcctgcctcagcctcc-gagtagctgggattacaggtgtgtgccaccatgctgggctaatt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859691 114 - 123690457 agtagtgagatctcagctcattgaaacctcttcctcctgggatcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcatgtgccaccacgcccggataatt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2358411 113 - 204787373 agcagtgagatctcagctcactgaaacctcttcctcctgggttcaagcgattctcctgcctcagccgcccgagcagttgggattacaggcgc-cgccaccacgcccagctaatt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192424411 113 - 192460366 agcagtgagatctcagctcactgaaacctcttcctcctgggttcaagcgattctcctgcctcagccgcccgagcagttgggattacaggcgc-cgccaccacgcccagctaatt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19162908 113 - 19675229 agcagtgagatctcagctcactgaaacctcttcctcctgggttcaagcgattctcctgcctcagccgcccgagcagttgggatcacaggcgc-cgccaccacgcccggctaatt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400673 113 - 16847902 agcagtgagatctcggctcactgaaacctcttcctcctgggttcaagcaattctcccgcctcagccacccgagcagttgggattacaggtgc-tgccaccacgcccagctaatt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91369604 114 + 91754291 agcagtgagatctcagctcactgaaacctcttccccccgggatcaagcaattctcctgcctcagccacccgagtagttgggattacaggcgtgcgccaccatgcccagctaatt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439831 113 + 1977891 agcagtgagatctcagctcaccgaaacctcttcctcctgggttcaagcgattctcctgcctcagccgcccgagcagttgagatcacaggtgc-cgccaccacgcccagctaatt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7375508 113 - 7796314 agcagtgagatctcagctcactgaaacctcttcctcccgggatcaagcaattctcctgcctcagccgcccgagtagttgggattatagcgtg-cgccaccacgcccagctaatt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73851386 114 + 74750902 agtagtgagatctcagctcactgaaacctctgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacagatgcctgccaccacgcctggctaatt i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 6384806 114 + 6778120 agtagtgagatctcagctcacagaaaccaccgcctcctgggttcaagcgattctcctgcctcagtctcccgagtagctgggattacagacgcctgccaccacgcctggctaatt i cebCap1.NW_016107444v1 C 0 I 8350 s aotNan1.NW_018503669v1 22297 114 + 69927 agtagtgagatctcagctcactgaaacttctgcctcccaggttcaagtgattctcctgcctcagcctcctgagtagctgggactacagatacctgccaccatgcctggctaatt i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 215899 41 + 608964 ---AGTGATAT------TCACC----CCTCTTTCTT---------------------------GCATTTGGGGTGGCCAGG--------------------------------- i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e saiBol1.JH378146 17294597 5171 - 17725628 I e canFam3.chr33 2329403 5697 - 31377067 I a score=653165.000000 s hg38.chr3_KI270934v1_alt 73595 105 + 163458 tttgtatttttagtagagatggggtttcaccatgttggccaggctagtctcaaactcctgacctcaggtgatctacctacctcagcctcccaaagtgctgggagt s panTro5.chr3 2545865 105 - 202621043 tttgtatttttagtagagatggggtttcaccatgttggccaggctagtctcgaactcctgacctcaggtgatctacccacctcagcctcccaaagtgctgggagt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136407 105 - 190779 tttgtatttttagtagagatggggtttcaccatgttggccaggctagtctcgaactcctgacctcaggtgatctacccacctcagcctcccaaagtgctgggagt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 86592 105 - 106623 tttgtatttttagtagagacggggtttcaccatgttggccaggcttgtgtcgaactcctgacctcaggtgatccgcctgcctcagcctccgaaagtgctgggagt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859805 105 - 123690457 tttatatttttagtagagacggggtttcaccatgttggccaggcttgtctcgaactcctgacctcatgtgatccgcctgccttggcctcccaaagtgctgggatt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2358524 105 - 204787373 ttcgtatttatggtagagacggggtttcaccgtgctggccaggcttgtcttgaactcctgacctcaggcgattcgcccgccttggcctcccaaagtgctgggatg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192424524 105 - 192460366 ttcgtatttatggtagagacggggtttcaccgtgctggccaggcttgtcttgaactcctgacctcaggcgattcgcccgccttggcctcccaaagtgctgggatg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19163021 105 - 19675229 ttcgtatttatggtagagacggggtttcaccgtgctggccaggcttgtcttgaactcctgacctcaggcgatttgcccgccttggcctcccaaagtgctgggatg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400786 105 - 16847902 ttcgtatttatggtagagacggggtttcaccatactggccaggcttgtcttgaactcctgacctcaggcggtccgcccgccttggcctcccaaaatgctgggatg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91369718 105 + 91754291 ttcgtatttatggtagagacggggtttcaccatgctggccaggcttgtcttgaactcctgacctcaggcgatccgcccgccttggcctcccaaagtgctgggatg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1439944 105 + 1977891 tttgtatttatggtagagatggggtttcaccgtgctggccaggcttgtcttgaactcctgacctcaggcgattcgcccgccttggcctcccaaagtgctgggatg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7375621 105 - 7796314 tttgtatttatggtagagatggggtttcaccatactggccaggcttgtcttgaactcctgacctcaggtgatccccccgccttggcctcccaaagtgctgggatg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73851500 96 + 74750902 ttggtatattt-------acaaaatgtcaccatgttggccaggctgttctcaacctcctgacctga-gcga-ttgcctgctttggcctccaaaaatgctgggatt i calJac3.chr17 C 0 C 0 s aotNan1.NW_018503669v1 22411 96 + 69927 ttggtatattt-------acaaaatttcaccatgttgtccaggctgttctcaacctcctgacctga-gtga-ctgcctgcttcggcctcccaaaatgctgggatt i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 215940 56 + 608964 --------------GGAGATGGTATTTCACCATTACTGCC--------------------------------CCACATACCACTCTCCCCCGTAC--CTGGGGT- i otoGar3.GL873829 C 0 I 100 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e saiBol1.JH378146 17294597 5171 - 17725628 I e cebCap1.NW_016107444v1 6384920 8350 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I a score=116723.000000 s hg38.chr3_KI270934v1_alt 73700 15 + 163458 acaggcatgagccac s panTro5.chr3 2545970 15 - 202621043 acaggcgtgagccac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136512 15 - 190779 acaggcgtgagccac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 86697 15 - 106623 acaggcgtgagccac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859910 15 - 123690457 acaggcgtgagccac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2358629 15 - 204787373 acaggcctgagccac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192424629 15 - 192460366 acaggcctgagccac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19163126 15 - 19675229 acaggcctgagccac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400891 15 - 16847902 acaggcctgagccac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91369823 15 + 91754291 acaggcctgagccac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1440049 15 + 1977891 acagacctgagccac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7375726 15 - 7796314 acaggcctgagccac i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73851596 15 + 74750902 acaggcatgagccac i calJac3.chr17 C 0 C 0 s aotNan1.NW_018503669v1 22507 15 + 69927 acaggcacgagccac i aotNan1.NW_018503669v1 C 0 I 9987 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e saiBol1.JH378146 17294597 5171 - 17725628 I e cebCap1.NW_016107444v1 6384920 8350 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 215996 100 + 608964 I a score=48005.000000 s hg38.chr3_KI270934v1_alt 73715 9 + 163458 tgcacccag s panTro5.chr3 2545985 9 - 202621043 tgcacccag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136527 9 - 190779 tgcacccag i panPan2.chrUn_NW_014024201v1 C 0 I 20 s gorGor5.CYUI01000576v1 86712 9 - 106623 tgcacccag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859925 9 - 123690457 cacgcccag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2358644 9 - 204787373 cgcgcccgg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192424644 9 - 192460366 cgcgcccgg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19163141 9 - 19675229 cgcgcccgg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400906 9 - 16847902 cgcacctgg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91369838 9 + 91754291 tgcgcccgg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1440064 9 + 1977891 cgcgcccgg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7375741 9 - 7796314 cgcgcccag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73851611 9 + 74750902 cgggcccag i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e saiBol1.JH378146 17294597 5171 - 17725628 I e cebCap1.NW_016107444v1 6384920 8350 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 215996 100 + 608964 I a score=6600.000000 s hg38.chr3_KI270934v1_alt 73724 1 + 163458 c s panTro5.chr3 2545994 1 - 202621043 c i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 86721 1 - 106623 c i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859934 1 - 123690457 c i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2358653 1 - 204787373 c i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192424653 1 - 192460366 c i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19163150 1 - 19675229 c i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16400915 1 - 16847902 c i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91369847 1 + 91754291 c i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1440073 1 + 1977891 c i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7375750 1 - 7796314 c i colAng1.NW_012118932v1 C 0 I 9028 s calJac3.chr17 73851620 1 + 74750902 c i calJac3.chr17 C 0 I 9517 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e saiBol1.JH378146 17294597 5171 - 17725628 I e cebCap1.NW_016107444v1 6384920 8350 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 215996 100 + 608964 I e panPan2.chrUn_NW_014024201v1 136536 20 - 190779 I a score=12690.000000 s hg38.chr3_KI270934v1_alt 73725 3 + 163458 caa s panTro5.chr3 2545995 3 - 202621043 caa i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 86722 3 - 106623 caa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859935 3 - 123690457 cAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2358654 3 - 204787373 cAA i rheMac8.chr2 C 0 I 8233 s macFas5.chr2 192424654 3 - 192460366 cAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19163151 3 - 19675229 cAA i macNem1.NW_012014355v1 C 0 I 9793 s cerAty1.NW_012004056v1 16400916 3 - 16847902 cAA i cerAty1.NW_012004056v1 C 0 I 7493 s chlSab2.chr15 91369848 3 + 91754291 cAA i chlSab2.chr15 C 0 I 7898 s manLeu1.NW_012102020v1 1440074 3 + 1977891 cAA i manLeu1.NW_012102020v1 C 0 I 8077 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e saiBol1.JH378146 17294597 5171 - 17725628 I e calJac3.chr17 73851621 9517 + 74750902 I e cebCap1.NW_016107444v1 6384920 8350 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 215996 100 + 608964 I e colAng1.NW_012118932v1 7375751 9028 - 7796314 I e panPan2.chrUn_NW_014024201v1 136536 20 - 190779 I a score=1115.000000 s hg38.chr3_KI270934v1_alt 73728 2 + 163458 gt s panTro5.chr3 2545998 2 - 202621043 gt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 86725 2 - 106623 gt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2859938 2 - 123690457 AT i nomLeu3.chr11 C 0 I 8064 s macFas5.chr2 192424657 2 - 192460366 AT i macFas5.chr2 C 0 I 7377 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19163154 9793 - 19675229 I e saiBol1.JH378146 17294597 5171 - 17725628 I e calJac3.chr17 73851621 9517 + 74750902 I e cebCap1.NW_016107444v1 6384920 8350 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 215996 100 + 608964 I e colAng1.NW_012118932v1 7375751 9028 - 7796314 I e manLeu1.NW_012102020v1 1440077 8077 + 1977891 I e chlSab2.chr15 91369851 7898 + 91754291 I e cerAty1.NW_012004056v1 16400919 7493 - 16847902 I e rheMac8.chr2 2358657 8233 - 204787373 I e panPan2.chrUn_NW_014024201v1 136536 20 - 190779 I a score=25148.000000 s hg38.chr3_KI270934v1_alt 73730 93 + 163458 gcttttattttcttaagccaattaattagagctcttttatatattttcagtagcaaaacactgtgtacacaacaacacataaatacacagatg s panTro5.chr3 2546000 93 - 202621043 gcttttattttcttaagccaattaattagagctcttttatatattttcagtagcaaaacattgtgtacaaaacaacacataaatacatagatg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 86727 93 - 106623 gcttttattttcttaagccaattaattagagctcttttatatattttcagtagcaaaacactgtgtacaaaacaacacataaatacatagatg i gorGor5.CYUI01000576v1 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19163154 9793 - 19675229 I e saiBol1.JH378146 17294597 5171 - 17725628 I e calJac3.chr17 73851621 9517 + 74750902 I e cebCap1.NW_016107444v1 6384920 8350 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 215996 100 + 608964 I e colAng1.NW_012118932v1 7375751 9028 - 7796314 I e manLeu1.NW_012102020v1 1440077 8077 + 1977891 I e chlSab2.chr15 91369851 7898 + 91754291 I e cerAty1.NW_012004056v1 16400919 7493 - 16847902 I e macFas5.chr2 192424659 7377 - 192460366 I e rheMac8.chr2 2358657 8233 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I e panPan2.chrUn_NW_014024201v1 136536 20 - 190779 I a score=17737.000000 s hg38.chr3_KI270934v1_alt 73823 79 + 163458 tattaggtatgctgaaagaagttcatcttatagattcataaagagcttttttcttacaccttcaaattctttttta--------ctt s panTro5.chr3 2546093 87 - 202621043 tattaggtatgctgagagaagttcatcttatagattcataaagagcttttttcttacaccttcaaattcttttttactttctttctt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 86820 83 - 106623 tattaggtatgctgagagaagttcatcttatagattcataaagagcttttttcttacaccttcaaattctttttta----ctttttt i gorGor5.CYUI01000576v1 C 0 C 0 s otoGar3.GL873829 216096 42 + 608964 TCTTAGCTGTGCCAAGAAAATTT----TTAAAGATCATTAA--------------------TTAAA--------------------- i otoGar3.GL873829 I 100 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19163154 9793 - 19675229 I e saiBol1.JH378146 17294597 5171 - 17725628 I e calJac3.chr17 73851621 9517 + 74750902 I e cebCap1.NW_016107444v1 6384920 8350 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e colAng1.NW_012118932v1 7375751 9028 - 7796314 I e manLeu1.NW_012102020v1 1440077 8077 + 1977891 I e chlSab2.chr15 91369851 7898 + 91754291 I e cerAty1.NW_012004056v1 16400919 7493 - 16847902 I e macFas5.chr2 192424659 7377 - 192460366 I e rheMac8.chr2 2358657 8233 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I e panPan2.chrUn_NW_014024201v1 136536 20 - 190779 I a score=109166.000000 s hg38.chr3_KI270934v1_alt 73902 180 + 163458 tttttttttttttttgagacagagtctcactctgttgcccaggctggagtgcaatggcttgatctcgactcactgcaacctctgcctcctggcttcaagtgattctcctgcctcagcttcctgagtagctgggattataggcacctgcca-ccacacctggctaa-ttttttttgtattttt s panTro5.chr3 2546180 181 - 202621043 tttttttttttttttgagacagagtctcactctgttgcccaggctggagtgcaatggcttgatcttgactcactgcaacctctgcctcctggcttcaagtgattctcctgcctcagcttcctgagtagctgggattacaggcacctgcca-ccacacctgactaatttttttttgtattttt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 86903 180 - 106623 tttttttttttttttgagacagagtctcactctgttgcccaggctggagtgcaatggcttgatctcgactcactgcaacctctgcctcctggcttcaagtggttctcctgcctcagcttcctga-tagctgggattataggcacctgccacccccacctggctaa-ttgtttttgtattttt i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192432036 178 - 192460366 tctttttttttttttgaggcggagtctcgctctgttgcccaggctggagtgcagtggccggatctcagttcgctgcaagctccacctcccgggttcctgccattctcctgcctcagcctcccgagtagctgggattacaggtgcctgcca-ccacgcccggctaa--ttcttttgtatttt- i macFas5.chr2 I 7377 C 0 s otoGar3.GL873829 216138 160 + 608964 ----------ttttagagacagagtcttactttgtcgccctcggtagagtgctgtggc---atcacaactcacagcaacctccagctcttgggcttaggtgattctcttgcctcagcctcccaagtagctgggactataggta--------tcacgcccagccta-ttttttCATTCCTTTT i otoGar3.GL873829 C 0 I 5846 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19163154 9793 - 19675229 I e saiBol1.JH378146 17294597 5171 - 17725628 I e calJac3.chr17 73851621 9517 + 74750902 I e cebCap1.NW_016107444v1 6384920 8350 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e colAng1.NW_012118932v1 7375751 9028 - 7796314 I e manLeu1.NW_012102020v1 1440077 8077 + 1977891 I e chlSab2.chr15 91369851 7898 + 91754291 I e cerAty1.NW_012004056v1 16400919 7493 - 16847902 I e rheMac8.chr2 2358657 8233 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I e panPan2.chrUn_NW_014024201v1 136536 20 - 190779 I a score=51914.000000 s hg38.chr3_KI270934v1_alt 74082 116 + 163458 agtagagacggggtttcaacatgttggccaagatggttttgaactcctgacctcaagagatctttgcggctcagcctcccaaa-tgctaggattacagacgtgagccaccgtg-ccca s panTro5.chr3 2546361 116 - 202621043 agtagagacggggtttcaacatgttggccaagatggttttgaactactgacctcaagagatctttgcggctcagcctcccaaa-tgctaggattacagacgcgagccaccgtg-ccca i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 87083 115 - 106623 agtagagat-gggtttcaccatgttggccaggatgattttgaatccctgacctcaagagatctttgcggctcagcct-ccaaa-tgctaggattacagacgtgagccaccgtgcccca i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192432214 115 - 192460366 --tagagacagggtttcaccatgttggccaggatggttttgaactcctgacctcaagagatcttcgagactcagcctcccaaagtgctaggattacgggcgtgagccactgca-cctg i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19163154 9793 - 19675229 I e saiBol1.JH378146 17294597 5171 - 17725628 I e calJac3.chr17 73851621 9517 + 74750902 I e cebCap1.NW_016107444v1 6384920 8350 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7375751 9028 - 7796314 I e manLeu1.NW_012102020v1 1440077 8077 + 1977891 I e chlSab2.chr15 91369851 7898 + 91754291 I e cerAty1.NW_012004056v1 16400919 7493 - 16847902 I e rheMac8.chr2 2358657 8233 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I e panPan2.chrUn_NW_014024201v1 136536 20 - 190779 I a score=269596.000000 s hg38.chr3_KI270934v1_alt 74198 307 + 163458 gccacaccttcgaattcttgataacctgttttactactctaagcggttgtcagctaaatagccttgaatttgcattttaaggaaactgaggtgaaaatcgaatagc-aaaatttacatcataacgtatggagagaaaaagtctggtgtgctggagggaaattaaaacagatttaattgccaattaaacataaaattatagaaattataaaggccttttaaatatatacacacacacaaagatcctatagcttttacttcagaaatttagccatgaaagctgggcgcggtggctcacgcctgtaatccc s panTro5.chr3 2546477 307 - 202621043 gccacaccttcgaattcttgataacctgttttactactctaagcggttgtcagctaaatagccttgaatttgcattttaaggaaactgaggtgaaaatcgaatagc-aaaatttacatcataacgtatggagagaaaaagtctggtgtgctggagggaaattaaaacagatttaattgccaattaaacataaaattacagaaatTATAAAGGCCTTTTAAatatatgcacacacgcaaagatcctatagcttttacttcagaaatttagccatgaaagctgggcgcggtgactcacgcctgtaatccc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 87198 308 - 106623 gccacaccttcgaattcttgataacctgttttactactctaagcagttgtcagctaaatagccttgaatttgcattttaaggaaactgaggtgaaaatcgaatagcaaaaatttacatcataacgtatggagagaaaaagtctggtgtgctggagggaaattaaaacagatttaattgccaattaaacataaaattatagaaattataaaggccttttaaatatatacacacacacaaagatcctatagcttttacttcagaaatttagccatgaaagctgggcgcggtgactcacgcctgtaatccc i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192432329 307 - 192460366 gccACacctttgaattcttgatagcctgttttacttctctaagcagttgtcagctaaatagcgttgaatttgcattttaaagaaactcaggtgaaaatcaaatagc-aaagtttacatcataaggtatggagagaaaaagtctggtgtgctagagggaaattaaaacagatttaattgccaattaaacataaaattatagaaatTATAAAGGCCTTTTAAatatacatacacacacaaagatcctatagcttttacttcaaaaatttagccatgaaagctgggcacagtggctcatgcctgttatccc i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16408412 307 - 16847902 GCCACacctttgaattcttgatagcctgttttacttctctaagcagttgtcagctaaatagcgttgaatttgcattttaaagaaactcaggtgaaaatcaaatagc-aaagtttacatcataaggtatggagagaaaaagtctggtgtgctagagggaaattaaaacagatttaattgccaattaaacataaaattatagaaattataaaggccttttaaatatacatacacacacaaagatcctatagcttttacttcagaaatttagccatgaaagctgggcacggtggctcatgcctgtaatccc i cerAty1.NW_012004056v1 I 7493 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19163154 9793 - 19675229 I e saiBol1.JH378146 17294597 5171 - 17725628 I e calJac3.chr17 73851621 9517 + 74750902 I e cebCap1.NW_016107444v1 6384920 8350 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7375751 9028 - 7796314 I e manLeu1.NW_012102020v1 1440077 8077 + 1977891 I e chlSab2.chr15 91369851 7898 + 91754291 I e rheMac8.chr2 2358657 8233 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I e panPan2.chrUn_NW_014024201v1 136536 20 - 190779 I a score=130349.000000 s hg38.chr3_KI270934v1_alt 74505 98 + 163458 agcaccttgggaggccgaggcgggcagatcacctgaggtcaggagttggagaccagcctgacgaacatggagaaaccccatctctactaaaaatacaa s panTro5.chr3 2546784 98 - 202621043 agcaccttgggaggctgaggcgggcagatcacctgaggtcaggagttggagaccagcctgaccaacatggagaaaccccatctctactaaaaatataa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136556 97 - 190779 agcaccttgggaggctgaggcgggcagatcacctgaggtcaggagttggagaccagcctgaccaacatggagaaaccccatctctactaaaaatac-a i panPan2.chrUn_NW_014024201v1 I 20 C 0 s gorGor5.CYUI01000576v1 87506 98 - 106623 agcaccttgggaggccgaggcgggcagatcatctgaggtcaggagttggagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaa i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192432636 98 - 192460366 agcaccttgggaggctgaggcaggcggatcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaa i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16408719 98 - 16847902 agcaccttgggaggctgaggcaggcggatcacctgaggtcaggagttcgagaccagcctgaccaacatggaggaaccccatctctactaaaaatacaa i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19163154 9793 - 19675229 I e saiBol1.JH378146 17294597 5171 - 17725628 I e calJac3.chr17 73851621 9517 + 74750902 I e cebCap1.NW_016107444v1 6384920 8350 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7375751 9028 - 7796314 I e manLeu1.NW_012102020v1 1440077 8077 + 1977891 I e chlSab2.chr15 91369851 7898 + 91754291 I e rheMac8.chr2 2358657 8233 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=47815.000000 s hg38.chr3_KI270934v1_alt 74603 26 + 163458 aaaattagccaggcgtggtggtgcat s panTro5.chr3 2546882 26 - 202621043 aaaattagccaggcatggtggtgcat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136653 26 - 190779 aaaattagccaggcatggtggtgcat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 87604 26 - 106623 agaattagctgggcatggtggtgcat i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192432734 26 - 192460366 aaaattagccgggcatggtggtgcat i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16408817 26 - 16847902 aaaattagccgggcatggtggtgcat i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1448154 26 + 1977891 aaaattagccgggcgtggtggtgcat i manLeu1.NW_012102020v1 I 8077 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19163154 9793 - 19675229 I e saiBol1.JH378146 17294597 5171 - 17725628 I e calJac3.chr17 73851621 9517 + 74750902 I e cebCap1.NW_016107444v1 6384920 8350 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7375751 9028 - 7796314 I e chlSab2.chr15 91369851 7898 + 91754291 I e rheMac8.chr2 2358657 8233 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=300174.000000 s hg38.chr3_KI270934v1_alt 74629 139 + 163458 gcctgtaatcccagctactcgggaggctgaggcaagagaatcacttgaaccagggaagcggagactgtggtgacccaagatcacgccattgcactccagcctgggcaacaagagtgaaactctgcctcaaaaaaaaaag s panTro5.chr3 2546908 138 - 202621043 gcctgtaatcccagctactcgggaggctgaggcaagagaatcacttgaaccagggaagcggagactgtggtaacccaagatcacgccgttgcactccatcctgggcaacaagagtgaaactctgcctcaaaacaaaaa- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136679 135 - 190779 gcctgtaatcccagctactcgggaggctgaggcaagagaatcacttgaaccagggaagcggagactgtggtgacccaagatcacgccgttgcactccatcctgggcaacaagagtgaaactctgcctcaaaacaa---- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 87630 127 - 106623 gcctgtaatcccagctactcgggaggctgaggcaagagaatcgcttgaaccagggaggcagaggttgctgtga-ccaagatcatcccattgtactccagcctgggcaacaagagtgaaactctgtc-------aa---- i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2366890 137 - 204787373 gcctgtaatcccaggtactcgggaggctgaggcaagagaatcgtttgaaccagggagacggaggttgcagtgagccaagatcactccattgcactccagcctgggcaacaagagtgaaa--ctgtctcaaaaaaaaaaa i rheMac8.chr2 I 8233 C 0 s macFas5.chr2 192432760 137 - 192460366 gcctgtaatcccagctactcgggaggctgaggcaagagaatcgtttgaaccagggagacggaggttgcagtgagccaagatcactccattgcactccagcctgggcaacaagagtgaaa--ctgtctcaaaaaaaaaaa i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16408843 139 - 16847902 gcctgtaatcccagctactcgggaggctgaggcaagagaatcgcttgaaccagggagacggaggttgcagtgagccaagatcactccattgcactccagcctgggcaacaagagtgaaactctgtctcaaaaaaaaaaa i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1448180 139 + 1977891 gcctgtaatcccagctactcgggaggctgaggcaagagaatcgcttgaaccagggagacggaggttgcagtgagccaagatcacttcattgcactccagcctgggcaacaagagtaaaactctgtctcaaaaaaaaaaa i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19163154 9793 - 19675229 I e saiBol1.JH378146 17294597 5171 - 17725628 I e calJac3.chr17 73851621 9517 + 74750902 I e cebCap1.NW_016107444v1 6384920 8350 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7375751 9028 - 7796314 I e chlSab2.chr15 91369851 7898 + 91754291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=5264.000000 s hg38.chr3_KI270934v1_alt 74768 7 + 163458 aaaaaaa s panTro5.chr3 2547046 7 - 202621043 aaaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136814 7 - 190779 aaaaaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 87757 7 - 106623 aaaagaa i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2367027 2 - 204787373 -----ag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192432897 2 - 192460366 -----ag i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16408982 2 - 16847902 -----ag i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1448319 2 + 1977891 -----ag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7384779 7 - 7796314 aaaaaag i colAng1.NW_012118932v1 I 9028 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19163154 9793 - 19675229 I e saiBol1.JH378146 17294597 5171 - 17725628 I e calJac3.chr17 73851621 9517 + 74750902 I e cebCap1.NW_016107444v1 6384920 8350 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e chlSab2.chr15 91369851 7898 + 91754291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=3422554.000000 s hg38.chr3_KI270934v1_alt 74775 971 + 163458 aaagagaaagaaaag-aaaaaaagaaatttagccatgaaataaatacaaattcaccagtttacaaacagaaaaactatctgat-ccaaacagtgttttttatcttaatag-gaaaataacagcaaatttaaagcaggcagagaagaaactagagaaaaaagaggactcaggaactctacagtttgcaggtcaacctcagggct---c-ctttttttttt--aatgtaaATGTGCAGAAAGACCATATTActtccactttacgtaaactctggcaagtagaggcgccatgaaccctatggagtactcg-------gctgggaggagcaaacgccctttctctttggagctgagaaaactcaatctctcatttacctatgacaacaacag-ttcagttcctcatgcaaat--acatagacaacccaaactgagattcattttgggagaaaaagcaatagagaagaccctttaggatgcatctctgaactagaattaggatccttaaatcacagcttcctagaagag-aaaaaaaaAAA----AAAAAAACAGCCAAGaccattccctgtaaactgtgctcagccaccccttctttgtag-ttctcgtctgccattacacacgccaaggtcaaatcctctcacagtgcagggtcatctctggttcccccaaagccaaagaggtcaggtcatgccgtacaggaagacagcagagctttagacctaagaagaatccgcccatcactcttgaaactccacaaagaaaacagagcaccctggaaggggtgagtggcccctttgttccggatcctttaaaggggctcgagtcattggaagccttctctagat-ttttttggtcccgcagatggcaaaggcaggaggaggtatagggaggaagaaaagtaagtgaaagagcatttgttG--TTTTTGTTTG-TTTGTTTTTTAAGACAGAAAGCAAACACAGAAACCAAGCACGTGA---TTTGTTGgtttttttc-------gtttag s panTro5.chr3 2547053 970 - 202621043 agagagaaagaaaag-aaaaaaagaaatatagccatgaaataaatacaaattcaccagttttcaaacagaaaaactgtcaggt-ccaaacagtgttttttatgttaacag-aaaaataatagcaaatttaaagcaggcagagaagaaactagagaaaaaagaggactcaggaactctatagtttgcaggtcaacctcagggct---c-ttttttttttt--aatgtaaACATGCAGAAAGACCATATTActtccactttacataaactctggcaagtagaggcaccatgaaccctatggagtactcg-------gctgggaggagcaaacgccctttctctttggagctgagaaaactcagtctctcatttacctatgacaacaacag-ttcagttcctcatgcaaat--acatagacaacccaaactgagattcattttgggagaaaaagcaatagagaagaccctttaggatgcatctctgaactagaattaggatccttaaatcacagcttcctagaagagaaaaaaaaAAAA----AAAAaaacagccaagaccattccctgtaaactgtgctcagccaccccttctctgtag-ttctcgtctgccattacacacgccaaggtcaaatcctctcacagtgcagggtcatctctggttcctccaaagccaaagaggtcacgtcatgccatacaggaaga---cagagctttagacctaagaagaatccgcccatcactcttgaaactccataaagaaaaaagagcaccctggaaggggtgagtggcccctttgttccgaatcctttaaaggggctcaagtcattagaagccttctctagat-ttttttggtaccgcagatggcaaaggcaggaggaggtatagggaggaagaaaagtaagtgaaagagcatttgttg-ttttttgtttg-tttgttttttAAGACAGAAAGCAAACACAGAAACCAAGCACATGA---TTTGTTGgtttttttc-------gtttag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136821 963 - 190779 agagagaaagaaaag-aAAAAAagaaatatagccatgaaataaatacaaattcaccagttttcaaacagaaaaactgtcaggt-ccaaacagtgttttttatgttaacag-aaaaataacagcaaatttaaagcaggcagagaagaaactagagaaaaaagaggactcaggaactctatagtttgcaggtcaacctcagggct---c---ttttttttt--aatgtaaACATGCAGAAAGACCATATTActtccactttacataaactctggcaagtagaggcaccatgaaccctatggagtactcg-------gctgggaggagcaaacgccctttctctttggagctgagaaaactcaatctctcatttacctatgacaacaacag-ttcagttcctcatgcaaat--acatagacaacccaaactgagattcattttgggagaaaaagcaatagagaagaccctttaggatgcatctctgaactagaattaggatccttaaatcacagcttcctagaagaa-gaaaaaaaaaa----acaa----agccaagaccatTCCCTGTAAACTGTGCTCAGCCACCCCTTCTTTGTAG-TTCTCgtctgccattacacacgccaaggtcaaatcctctcacagtgcagggtcatctctggttcctccaaagccaaagaggtcacgttatgccatacaggaaga---cagagctttagacctaataagaatccgcccatcactcttgaaactccacaaagaaaaaagagcaccctggaaggggtgagtggcccctttgttccggattctttaaaggggctcgagtcattggaagccttctctagat-ttttttggtaccgcagatggcaaaggcaggaggaggtatagggaggaagaaaagtaagtgaaagagcatttgttg-ttttttgtttg-tttgttttttAAGACAGAAAGCAAACACAGAAACCAAGCACATGA---TTTGTTGGTTTTTTTC-------GTTTAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 87764 979 - 106623 aaaaagaaagaaaagaaaaaaaagaaatatcgccatgaaataaatacaaactcaccagttttcaaacaaaaaaactgtcaggtcccaaacagtgttttttatcttaacagaaaaaataacagcaaatttaaagcaggcagagaagaaaacagagaaaaaagaggactcaggaactctatagtttgcaggtcaacctcagggct---ctttttttttttt--aatgtaaatgtgcacaaagacCATATTActtccactttacataaactctggcaagtagaggcaccatgaaccgtatggagtactcg-------gctgggaggagcgaacgccctttctctttggagctgagaaaactcaatctctcatttacctatgacaacaacagtttcagttccttatgcaaatacacatagacaagccaaactgagattcattttgggagaaaaagcaatagagaagaccctttaggatatatctctgaactagaattaggatccttaaatcacagcttcctagaagag-aaaaaaaaaaaacccaaaaaaacagccaagaccattccctgt-aactgtgctcagccaccccttctttgtagtttctcgtctgccattacacacgccaaggtcaaatcctctcacagtgcagggtcatctctggttcctccaaagccaaagaggtcaggtcatgccatacaggaaca---cagagctttagacctgagaagaatccgtccatcactcttgaaactccacaaagaaaacagagcaccctggaaggggtgagtggcccctttgttccaaatcctttaaaggggctcgagtcattggaagccttctctagat-ttttttggtaccgcagat-gcaaaggcaggaggaggtatagggaggaagaaaagtaagtgaaagagcatttgttgtttttttgtttg-tttgttttttAAGACAGAAAGCAAACACAGAAACCAAGCACATGA---CTTGTTAGTTTTTTG--------GTTTAG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2367029 971 - 204787373 aaagaaaaagaaaag-aaAAAAagaaatttagccatgaaataaatacaaattcaccagtttgcaaacaaaaaaactgtcggat-ccaaacagtgttttttatcttaatag-aaaaataacagcaaattgaaagcaggcagagaagaaaatagagaaaaaagagaactcaggaattctgtcgtttgcaggtcaaccttagggtc---ttttttttttttt--aatgtaaATGTGCACAAAGACCATATTACAtccactttacataaactctggcaagtagaggcacca-gaactg-atggagtactcgGGTTCATgctgggtggggcaaacgccctttctcttcggagctgagaaaactcaatttctcatttacctatgaaaacaacag-ttcagttcctcatccaaatgcacacagacaagccaaactgagattcattttgggagaaaaagcaatagagaagaccctttagaatgcatctctgaactagaattaggatccttacatcacggcttcctagaagag-gaaaaaaaacc------------agccaagaCCATTCCCTGCaaac--tgctcagccaccacttct-------ttctcgtctgccattacacacgccaaggtccaatcctctcacagtgcaaggtcatctctggttcccccaaagccaaagaggtcaggtcatgccatacaggaaga---cagagctttagacctaagaagaatctgcctatcactcttgaaactccacaaagaaaacagagcaccccgaaagtggggagtggcccctttgtactgaatcctttaaagggatt--agtcattagaagccttctctaggtgttttttggtactgtagatggcaagggggaaaggaggtatagggtggaagaaaagtaagtgaaagagcatttgttggtttttttgttg-gtttttttTTAAGACAGAAAGCAAACACAGAAACCAAGTGCAtggttgtttgtttgtttggttgttggttAgtttag i rheMac8.chr2 C 0 I 5 s macFas5.chr2 192432899 971 - 192460366 aaagaaaaagaaaag-aaaaaaagaaatttagccatgaaataaatacaaattcaccagtttgcaaacaaaaaaactgtcagat-ccaaacagtgttttttatcttaatag-aaaaataacagcaaattgaaagcaggcagagaagaaaatagagaaaaaagagaactcaggaattctgtcgtttgcaggtcaaccttagggtc---ttttttttttttt--aatgtaaatgtgcacaaagaccatattacatccactttacataaactctggcaagtagaggcacca-gaactg-atggagtactcgGGTTCATgctgggtggggcaaacgccctttctcttcggagctgagaaaactcaatttctcatttacctatgaaaacaacag-ttcagttcctcatccaaatgcacacagacaagccaaactgagattcattttgggagaaaaagcaatagagaagaccctttagaatgcatctctgaactagaattaggatccttacatcacggcttcctagaagag-gaaaaaaaacc------------agccaagaCCATTCCCTGCaaac--tgctcagccaccacttct-------ttctcgtctgccattacacacgccaaggtccaatcctctcacagtgcaaggtcatctctggttcccccaaagccaaagaggtcaggtcatgccatacaggaaga---cagagctttagacctaagaagaatctgcctatcactcttgaaactccacaaagaaaacagagcaccccgaaagcggggagtggcccctttgtactgaatcctttaaagggatt--agtcattagaagccttctctaggtgttttttggtactgtagatggcaagggggaaaggaggtatagggtggaagaaaagtaagtgaaagagcatttgttggtttttttgttg-gtttttttTTAAGACAGAAAGCAAACACAGAAACCAAGTGCAtggttgtttgtttgtttggttgttggttAgtttag i macFas5.chr2 C 0 I 5 s macNem1.NW_012014355v1 19172947 961 - 19675229 AAAGAAAAAGAAAAG-AAAAAAagaaatttagccatgaaataaatacaaattcaccagtttgcaaacaaaaaaactgtcagat-ccaaacagtgttttttatcttaatag-aaaaataacagcaaattgaaagcaggcagagaagaaaatagagaaaaaagagaactcaggaactctgtcgtttgcaggtcaaccttagggtctttttttttttttttt--aatgtaaatgtgcacaaagaccatattacatccactttacataaactctggcaagtagaggcacca-gaactg-atggagtactcgGGTTCATgctgggtggggcaaacgccctttctcttcggagctgagaaaactcaatttctcatttacctatgaaaacaacag-ttcagttcctcatccaaatgcacacagacaagccaaactgagattcattttgggagaaaaagcaatagagaagaccctttagaatgcatctctgaactagaattaggatccttacatcacggcttcctagaagag-gaaaaaaaacc------------agccaagaCCATTCCCTGCaaac--tgctcagccaccacttct-------ttctcgtctgccattacacacgccaaggtcaaatcctctcacagtgcaaggtcatctctggttcccccaaagccaaagaggtcaggtcatgccacacaggaaga---cagagctttagacctaagaagaatctgcccatcgctcttgaaactccacaaagaaaacagagcaccccgaaagcggggagtggcccctttgtactgaatcctttaaagggatt--agtcattagaagccttctccaggtgttttttggtactgtagatggcaagggggaaaggaggtatagggtggaagaaaagtaagtgaaagagcatttgttgg--------------TTTTTTTTAAGACAGAAAGCAAACACAGAAACCAAGTGCAtggttgtttgtttgtttggttgttggttagtttag i macNem1.NW_012014355v1 I 9793 I 3 s cerAty1.NW_012004056v1 16408984 970 - 16847902 aaagaaaaagaaaag-aaaaaaagaaatttagccatgaaataagtacaaattcaccagtttgcaaacaaaaaagctgtcagat-ccaaacagtgttttttatcttaatag-aaaaataacagcaaattgaaagcaggcagagaagaaaatagagaaaaaagagaactcaggaactctgtcgtttgcaggtcaaccttagggtc---ttttttttttttt-aaatgtaaATGTGCACAAAGACCATATTACAtccactttacataaactctggcaagtagaggcacca-gaaccg-acggagtactcgGGTTCATgctgggaggagcaaacgccctttctcttcggagctgagaaaactcaatctctcatttacctatgaaaacaacag-ttcagttcctcatccaaatgcttacagacaagccaaagtgagattcattttgggagaaaaagcaatagagaagaccctttagaatgcatctctgaactagaattaggatccttaaatcatggcttcctagaagag-gaaaaaaaacc------------agccaagaCCATTCCCTGCaaac--tgctcagccaccgcttct-------ttctcgtctgccattacacacgccaaggtcaaatcctctcacagtgcaaggtcatctctgattcccccaaagccaaagaggtcaggtcatgccatacaggaaga---cagagctttagacctaagaagaatctgcctatcactcttgaaactccacaaagaaaacagagcaccccgaaagcggggagtggcccctttgtactgaatcctttaaagggatt--agtcattagaagccttctctaggtgttttttggtactgtagatggcaaggggggaaggaggtatagggtggaagaaaagtaagtgaaagagcatttgttggTTTTTTTGTTG-TTTTTTTTTTAAGAC--AAAGCAAACACAGAAACCAAGTGCAtggttgtttgtttgtttggttgttggttAGtttag i cerAty1.NW_012004056v1 C 0 I 1 s manLeu1.NW_012102020v1 1448321 963 + 1977891 aaagaaaaagaaaag-aaAAAAagaaatttagccatgaaataaatacaaattcaccagtttgcgaacaaaaaaactgtcagat-ccaaacagtgttttttatcttaatag-aaaaataacagcaaattgaaagcaggcagagaagaaaatagagaaaaaagagaactcaggaactctgtcgtttgcaggtcaaccttagggtc---tttttttttttttaaaatgtaaatgtgcacaaagaccatgttacttccactttacataaactctggcaagtagaggtacca-gaactg-acggagtactcgGGTTCATgctgggaggagcaaacgccctttctcttcggagctgagaaaactcaatctctcatttacctatgaaaacaacag-ttcagttcctcatccaaatgctcacagacaagccaaactgagattcattttgggagaaaaagcaatagagaagaccctttagaatgcatctctgaactagaattaggatccctaaatcacggcttcctagaagag-gaaaaaaaacc------------agccaagaCCATTCCCTGCaaac--tgctcagccaccgcttct-------ttctcgtctgccattacacacgccaaggtcaaatcctctcacagtgcaaggtcatctctggttcccccaaagccaaagaggtcaggtcatgccatacaggaaga---cagagctttagacctaagaagaatctgcctatcactcttgaaactccacaaagaaaacagagcactcggaaagcagggagtggcccc-ttgtactgaatcctttaaagggatt--agtcattagaagccttctctagattttttttggtactgcagatggcaaggggggaaggaggtatagggtggaagaaaagtaagtgcaagagcatttgttggtttttttgttgtttttttttttAAGAC--AAAGCAAACACAGAAACCAAGTGCATGGTT-TTTGTTTGTTTGGttg-------gtttag i manLeu1.NW_012102020v1 C 0 I 2 s colAng1.NW_012118932v1 7384786 957 - 7796314 aaagaaaaagaaaag-aaaaaaagaaatttagccatgaaataaatacaaattcaccagtttgcaaacaaaaaa-ctgtcagat-ccaaacagtgttttttatcttaatag-aaaaatgacagcaaatttaaagcaggcagagaagaaaatagagaaaaaagagaactcaggaactctattgtttgcaggtcaaccttagggctcttttttttttttttt--aatgtaaatgtgcacaaagaccatattacttccactttacataaactctggcaagtagaggcaccaggaaccg-atggagtactcgGGTTCATgctgggaggagcaaacgccctttctctttggagctgagaaaactcaatctctcatttacctatgaaaacaacag-ttcagttccccatccaaatgcacacagacaagccaaactgagattcattttgagagaaaaagcaatagagaagaccctttagaatgcatctctgagttagaattaggatccttaaatcacggcttcctagaagag-aaaaaaaaa-c------------agccaagaCCATTCCCTGTAAAC--TGCTCAGCCACCACTTCTTTGTAG-TTCTCgtctgccatgacacacgccaaggtcagatcctctcacagtgcaaggtcatctctggttcccccaaagccaaagaggtcaggtcatgccatacaggaaga---cagagctttagacctaagaagaatccgcctatcactcttgaaactccacaaagaaaacagagcacccggaaagcggggagtggcccctttgtactgaatcctttaaagggatt--agtcattagaagccttctctagatg-tttttggtaccgcagatggcaaggggggaaggaggtatagggtggaagaaaagtaagtgaaagggcatttgttgg---------------TTTTTGTAAGACAGAAAGCAAACACAGAAAGCAAGTACATGgtttttggtttgtttgtttg-------gtttag i colAng1.NW_012118932v1 C 0 I 4 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e saiBol1.JH378146 17294597 5171 - 17725628 I e calJac3.chr17 73851621 9517 + 74750902 I e cebCap1.NW_016107444v1 6384920 8350 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e chlSab2.chr15 91369851 7898 + 91754291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=545894.000000 s hg38.chr3_KI270934v1_alt 75746 112 + 163458 ttttttcctcttttgcagctgcaaggaattttagccaaattagagaggctttgttacccataatttggaattctcacttggatttgaccaagtcaggtagagttggtcaaat s panTro5.chr3 2548023 112 - 202621043 ttttttcctcttttgcagctgcaaggaattttagccaaattagagaggctttgttacccataatttggaattctcacttggatttgaccaagtcaggtagagttggtcaaat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137784 112 - 190779 TTTTTTCCTCttttgcagctgcaaggaattttagccaaattagagaggctttgttacccataatttggaattctcacttggatttgaccaagtcaggtagagttggtcaaat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 88743 111 - 106623 TTTTCTCCTC-tttgcagctgcaaggaattttagccaaattagagaggctttgttacccataatttggaattctcacttggatttgaccaagtcaggtagagttggtcaaat i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2368005 111 - 204787373 ttttttcctcttttgcagttgcaaggaattttagccaaattagag-ggctttgttacccataatttggaattctcacttggatttgaccaagtcaggtagagttggtcaaat i rheMac8.chr2 I 5 C 0 s macFas5.chr2 192433875 111 - 192460366 ttttttcctcttttgcagttgcaaggaattttagccaaattagag-ggctttgttacccataatttggaattctcacttggatttgaccaagtcaggtagagttggtcaaat i macFas5.chr2 I 5 C 0 s macNem1.NW_012014355v1 19173911 111 - 19675229 ttttttcctcttttgcagttgcaaggaattttagccaaattagag-ggctttgttacccataatttggaattctcacttggatttgaccaagtcaggtagagttggtcaaat i macNem1.NW_012014355v1 I 3 C 0 s cerAty1.NW_012004056v1 16409955 111 - 16847902 ttttttcctcttttgcagttgcaaggaattttagccaaattagag-ggctttgttacccataatttggaattctcacttggatttgaccaagtcaggTAGAGTTGGTCAAAT i cerAty1.NW_012004056v1 I 1 C 0 s chlSab2.chr15 91377749 111 + 91754291 tttttTCCTCttttgcagttgcaaggaattttagccaaattagag-ggctttgttatccataatttggaattctcacttggatttgaccaagtcaggcagagttggtcaaat i chlSab2.chr15 I 7898 C 0 s manLeu1.NW_012102020v1 1449286 110 + 1977891 ttttttcctcttttgcagttgcaaggaattttagccaaattaga--ggctttgttacccataatttggaattctcacttggatttgaccaagtcaggTAGAGTTGGTCAAAT i manLeu1.NW_012102020v1 I 2 C 0 s colAng1.NW_012118932v1 7385747 111 - 7796314 ttttttCCTCttttgcagttgcaaggaattttagccaaattagag-ggctttgttgcccgtaatttggaattctcacttggatttgaccaagtcaggtagagttggtcaaat i colAng1.NW_012118932v1 I 4 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e saiBol1.JH378146 17294597 5171 - 17725628 I e calJac3.chr17 73851621 9517 + 74750902 I e cebCap1.NW_016107444v1 6384920 8350 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=410463.000000 s hg38.chr3_KI270934v1_alt 75858 77 + 163458 ctgatgagagaaagaccagaaaa---aacaacaacaacagaagtcaaatgatatgaacacagactgctctaatgggaaga s panTro5.chr3 2548135 80 - 202621043 ctgatgagagaaagaccagaaaaaacaacaacaacaacaaaagtcaaatgatatgaccacagactgctctaatgggaaga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137896 77 - 190779 ctgatgagagaaagaccagaaac---aacaacaacaacaaaagtcaaatgatatgaccacagactgctctaatgggaaga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 88854 77 - 106623 ctgacgagagaaagaccagaaca---aacaacaacaacaaaagccaaATGATGTGGCCACAGACTGCTCGAACGGGAAGA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2368116 77 - 204787373 ctgatgagagaaagtccagaaca---aacagcaacaaaaaaagcccaatgaaatgaccactgactgccctaatggtaaga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192433986 77 - 192460366 ctgatgagagaaagtccagaaca---aacagcaacaaaaaaagcccaatgaaatgaccactgactgccctaatggtaaga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19174022 77 - 19675229 ctgatgagagaaagtccagaaca---aacagcaacaaaaaaagcccaatgaaatgaccactgactgccctaatggtaaga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16410066 77 - 16847902 CTGATGAGAGAAAGTCCAGAACA---AACAGCAACAAGAAAAGCCCAATGAAatgaccactgactgccctaacggtaaga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91377860 77 + 91754291 ctgatgagagaaagtccagaacg---aacagcaacaagaaaagcccaatgaaatgaccactgactgccctaatggtaaga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1449396 77 + 1977891 CTGATGAGAGAAAGTCCAGAACA---AACAGCAACAAGAAAAGCCCaatgaaatgaccactgactgctctaatggtaaga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7385858 77 - 7796314 ctgatgagagaaagtccagaaca---aacagcaacaaaaaaagcccaacgatatgaccactgactgctctaatggtaaga i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73861138 75 + 74750902 CTGATGAGAGAAAGACCAGAACA---AACAACAGAAAAAAAAACC-AACAatatagtcactgagtgctctcatgg-aagg i calJac3.chr17 I 9517 C 0 s saiBol1.JH378146 17299768 74 - 17725628 CTGATGGGAGAAAGACCAGAACA---AACAACAG--ATAAAAACC-AACAatgtgatcaccgagtgtgctcatggtaagg i saiBol1.JH378146 I 5171 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e cebCap1.NW_016107444v1 6384920 8350 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=1146953.000000 s hg38.chr3_KI270934v1_alt 75935 163 + 163458 agaaattcagaccagctggttgttaaccttcagccaagacaaaacctcagttcagctacttacctagggatgggtctcaggctgaagactgctctctaccatccttgaagcaggaaaaaaactcgaacttgtcttccctgctgggag---caagctcaaactccat s panTro5.chr3 2548215 163 - 202621043 agaaattcagaccagctggttgttaaccttcagccaagacaaaacctcagttcagctacttacctagggatgggtctcaggctgaagactgctctctaccatccttgaagcaggaaaaaaactcgaacttgtcttccctgctgggag---caagctcaaactccat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137973 163 - 190779 agaaattcagaccagctggttgttaatcttcagccaagacaaaacctcagttcagctacttacctagggatgggtctcaggctgaggactgctctctaccatccttgaagcaggaaaaaaactcgaacttgtcttccctgctgggag---caagctcaaactccat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 88931 162 - 106623 AGAAATTCAGACCAGCTGATTGTTAACGTTCAGccaagacaaaacctcagttcagctacttacctagggatgggtctcaggctgaagactgctctctaccatccttgaagcaggaaaaaaactcgaac-tgtcttccctactgggag---caagctcaaactccat i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2368193 163 - 204787373 agaaattcagaccagctggttgttaagctttaaccaagacaaaacctcaatgcagctacttacctagggatgggtcccaggctgaagactgctctctaccatcctagaagcaggaaagaaactcgaacttgtcttccctattgggag---caagctcaaactccat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192434063 163 - 192460366 agaaattcagaccagctggttgttaagctttaaccaagacaaaacctcaatgcagctacttacctagggatgggtcccaggctgaagactgctctctaccatcctagaagcaggaaagaaactcgaacttgtcttccctattgggag---caagctcaaactccat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19174099 163 - 19675229 agaaattcagaccagctggttgttaagctttaaccaagacaaaacctcaatgcagctacttacctagggatgggtcccaggctgaagactgctctctaccatcctagaagcaggaaagaaactcgaacttgtcttccctattgggag---caagctcaaactccat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16410143 163 - 16847902 agaaattcagaccagctggttgttaagctttaaccacgacaaaacctcaatgcagctacttacctagggatgggtcccaggctgaagactgctctctaccatcctagaagcaggaaagaaactcgaacttgtcttccctattgggag---caagctcaaactccat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91377937 159 + 91754291 agaaattcagaccagctggttgttaagctttaaccaagacaaaacctctatgcagctacttacctagggatgggtcccaggctgaagactgctctctaccatcctggaagcaggaaagaaactcgaacttgtcttccctgttggg-------agctcaaactccat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1449473 163 + 1977891 agaaattcagaccagctggttgttaagctttaaccacgacaaaacctcaatgcagctacttacctagggatgggtcccaggctgaagactgctctctaccatcctagaagcaggaaagaaactcgaacttgtcttccctattgggag---caagctcaaactccat i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7385935 163 - 7796314 agaaattcagaccagctggtcgttaagctttaaccaagacaaaaccttaatgcagctacttatctagggatgggtcccaggctgaagactgctctctaccatcctagaagcaggaaagaaactcgaacttgtcttccccattgggag---cgagctcaaactccat i colAng1.NW_012118932v1 C 0 I 1661 s calJac3.chr17 73861213 152 + 74750902 agaaattaagaccaactgtt-gttaaactt----taagacaaaaccccagttcagctgcttacctagggatgagtctcaggctgaaggctgctctctaccatccta---------aaaagactccaacttgtcttccctgctgagaggttcaagctgaagccccgt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17299842 164 - 17725628 agaaattaagaccaactggt-gttaaacttcagacaagacaaaaccacaattcagctacttacctcgggatgagtctcaggctgaaggctgctctctaccatcctagaagcagg-aaaaaacatcaacttttctttcctgctgggaggttcaagctgaagctccat i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6393270 165 + 6778120 agaaattaagaccaactggt-gttaaactttagccaagacaaaaccccagttcagctacttacctagggatgagtctcaggctgaaggctgctctctaccatcctagaggcaggagaaaaactccaacttgccttccctgctgggaggttcaaggtgaagctccat i cebCap1.NW_016107444v1 I 8350 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=2255839.000000 s hg38.chr3_KI270934v1_alt 76098 385 + 163458 aaaagagttgtcagccttccatcatcacggacccaggaaatcttgccttccttcttggaagcaaataaaactccaaaagaaggggagggggagttgtacatc-aaataaactttagatcacgaccaagttttgagagatc-agggactctctggagggggtgctcccagacctcagcaaattgtcctgttggtttgagccataaggtt-agctcatgctgctaccaa-gcaccaatagatctgtcaaaggtcaggggcacctcaactcagaatccctccatggttaccaAAAtgtgaaccccccaaatctgagacaggtctcagttaatttagaaagtttattgttccaaggttgaagatgcacacccgtgacacagcctcaggatgtc s panTro5.chr3 2548378 385 - 202621043 aaaagagttgtcagccttccatcatcacggacccaggaaatcttgccttccttcttggaagcaaataaaactccaaaagaaggggagggggagttgtacatc-aaataaactttagatcacgaccaagttttgagagatc-agggactctctggagggggtgctcccagacctcagcaaattgtcctgttggtttgagccataaggtt-agctcatgctgctaccaa-gcaccaatagatctgtcaaaggtcaggggcacctcaactcagaatccctccatggttaccaAAAtgtgaaccccccaaatctgagacaggtctcagttaatttagaaagtttattgttccaaggttgaagatgcacacccgtgacacagcctcaggatgtc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 138136 385 - 190779 aaaagagttgtcagccttccatcatcacggacccaggaaatcttgccttccttcttggaagcaaataaaactccaaaagaaggggagggggagttgtacatc-aaataaactttagatcacgaccaagttttgagagatc-agggactctctggagggggtgctcccagacctcagcaaattgtcctgttggtttgagccataaggtt-agctcatgctgctaccaa-gcaccaatagatctgtcaaaggtcaggggcacctcaactcagaatccctccatggttaccaAAAtgtgaaccccccaaatctgagacaggtctcagttaatttagaaagtttattgttccaaggttgaagatgcacacccgtgacacagcctcaggatgtc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 89093 383 - 106623 aaaagagttgccaaccttccatcatcacggacccaggaaatcttgccttccttcttggaagcaaataaaactccaaaagaagggga-ggggagttgtacatc-aaataaactttagatcacgaccaag-tttgagagatc-agggactctctggagggggtgctcccagacctcagaaaattgtcctgttggtttgag-cataaggttaagctcatgctgctaccaaggcaccaatagatctgtcaaaggtcaggggcacctcaactcagaatccctccatggttaccaAAAtgtgaa-cccccaaatctgagacaggtctcagttaatttagaaagtttgtttttccaaggttgaagatgcacacccgtgacacagcctcaggatgtc i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2368356 383 - 204787373 agaagagttgcctgccttccaccatcatgcacccaggaaatcttgccttccttattggaagcaaataaaactccaaaagaaggggagggggaattgtacaac-aaataaactttagattacgaccaagttttgagagatc-aggggttctctggagtgggtgctcccagacctcagc-aattgtcctattggtttgagccgtaaggtt-agctcatgttgctatcat-gctccaatagatctgtcaaaggtcgggggcatctccactcagaatccctccatggctg-cAAAAtgtgaactccccaaatctgagacaggtctcagtgaaattagaaggtttattttgccaaggctgaggacacatgcccgtgacacagcctcaggaagtc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192434226 383 - 192460366 agaagagttgcctgccttccaccatcatgcacccaggaaatcttgccttccttattggaagcaaataaaactccaaaagaaggggagggggaattgtacaac-aaataaactttagattacgaccaagttttgagagatc-aggggttctctggagtgggtgctcccagacctcagc-aattgtcctattggtttgagccgtagggtt-agctcatgttgctatcat-gctccaatagatctgtcaaaggtcgggggcatctccactcagaatccctccatggctg-cAAAAtgtgaactccccaaatctgagacaggtctcagtgaaattagaaggtttattttgccaaggctgaggacacatgcccgtgacacagcctcaggaagtc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19174262 383 - 19675229 agaagagttgcctgccttccatcatcatgcacccaggaaatcttgccttccttattggaagcaaataaaactccaaaagaaggggagggggaattgtacaac-aaataaactttagattacgaccaagttttgagagatc-aggggttctctggagtgggtgctcccagacctcagc-aattgtcctattggtttgagccgtaaggtt-agctcatgttgctatcat-gctccaatagatctgtcaaaggtcaggggcatctccactcagaatccctccatggctg-cAAAAtgtgaactccccaaatctgagacaggtctcagtgaaattagaaggtttattttgccaaggctgaggacacatgcccgtgacacagcctcaggaagtc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16410306 382 - 16847902 agaagagttgcctgccttccatcatcatgcacccaggaaatcttgccttccttattgggagcaaataaaactccaaaagaaggggagggggaattgtacagc-aaataaactttagattacgaccaagttttgagagatc-aggggttctctggagtgggtgctcccagacctcagc-aattgtcctattggtttgagccgtaaggtt-agctcatgttgctaccaa-gcaccaatagatctgtcaaaggtcaggggcatctccactcagaatccctccatggctg-cGAAAtgtgaatgccccaaatctgagaaaggtgtcagtgaaattagaaggtttattttgccaaggctgaggacacatgcccgtgacacagcctcaggaggt- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91378096 383 + 91754291 agaagacttgcctgccttccatcgtcatggacccgggaaatcttgccttccttattggaagcaaataaaactccaaaagaa-gggagggggaattgtacagc-agataaactttagatcacgaccaagttttgagagatcggggggttctctggagggggtgcttccagacctcagc-gattgtcctattggtttgagccgtaaggtt-agctcatgttgctaccaa-gcaccagtagatctgtcaaaggtcaggggcatctccactcagaacccctccatggctg-ccaAAtgtgaaccccccaaatctgagacaggtctcagtgaaattagaaggtttattttgccaaggctgaggacacatgcccgtgacacagcctcaggaggtc i chlSab2.chr15 C 0 I 32 s manLeu1.NW_012102020v1 1449636 383 + 1977891 agaagagttgcctgccttccatcatcatgcacccaggaaatcttgccttccttattggaagcaaataaaactccaaaagaaggggagggggaattgtacagc-aaataaactttagattacgaccaagttttgagagatc-aggggttctctggagtgggtgctcccagacctcagc-aattgtcctattggtttgagccgtaaggtt-agctcatgttgctaccaa-gcaccaatagatctgtcaaaggtcaggggcatctccactcagaatccctccatggctg-ccaAAtgtgaacgccccaaatctgagacaggtctcagtgaaattagaaggtttattttgccaaggctgaggacacatgcccgtgacacagcctcaggaggtc i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73861365 379 + 74750902 agaggagttg-ctgccttccatcatcatggacgcaggaaatcgtgccttccttgctggaagcaagtaaaactccaaaaaca------ggggagttgtacagcaaaataaactttagatcacgaccaaattttgggagatc-agacattctttggagggggtgctcccagacctcagcaaattgtcccattggtttgaaccataaggtt-aactcatgcaggtaccaa-gcaccaacagacttgtcaaaggtcaggggcatctccactcagaatccctttatggttaccaAAAtgtgaaccccaaatatctgagataggtctcagtcaatttagaaactttattttgccaaggttgaggacgcacacccgtcacgcagcctcaggaggtc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17300006 376 - 17725628 aaaggagttg-ctgccttccatcatcatgggcgcaggaaatcttgccttctttgctggaagcaagtaagactccaaaaac-------ggggagttgtacagcaaaataaactttagatcacgaccagattttgggagatc-agggattctttggaaggggtgctcccggacctcagc-cattgtcccattggtttgagccctaaggtt-agctcgtgcaggtaccaa-gcaccaatagatttgcccaagggcaggggcatctccaggcagaatcccttcacggtcaccaAAAtgtgaaccccaaatgtctgagacaggtctcagtccatttagaaac-ttattttgccaaggttgaggacgcacacccgtgatgcagcctcaggaggtc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6393435 379 + 6778120 aaaggagttg-ctgcctttcgtcatcatggacgcaggaaatcttgccttctttgctggaagcaagtaaaactccaaaaaca------ggggagttgtacagcaaaataaactttagatcacgaccaaattttgggaaatc-agggattctttggagcgggtgctcccagacctcagcaaattgtcccgttggtttgagccataaggtt-aactcatgcaggtacgaa-gcaccaatagatttgtcaaaggtcaggggcgtctccacacagaatcccttcatggttaccaAAAtgtgaaccccaaatgtctgagataggtctcagtcaatttagaaactttattttgccaaggttgaggacgcacactcatgacgcagcctcgggcggtc i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=55017.000000 s hg38.chr3_KI270934v1_alt 76483 24 + 163458 ctgacgacatgtg-ccaaggtggtc------------------ s panTro5.chr3 2548763 21 - 202621043 ct---gacatgtg-ccaaggtggtc------------------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 138521 21 - 190779 ct---gacatgtg-ccaaggtggtc------------------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 89476 24 - 106623 ctgacgacatgtg-ccaaggtggtc------------------ i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2368739 24 - 204787373 ctgacgacgtgtg-ccaaggtggtc------------------ i rheMac8.chr2 C 0 I 18 s macFas5.chr2 192434609 24 - 192460366 ctgacgacgtgtg-ccaaggtggtc------------------ i macFas5.chr2 C 0 I 18 s macNem1.NW_012014355v1 19174645 24 - 19675229 ctgacgacgtgtg-ccaaggtggtc------------------ i macNem1.NW_012014355v1 C 0 I 18 s cerAty1.NW_012004056v1 16410688 15 - 16847902 ctga----------ccaaggtggtc------------------ i cerAty1.NW_012004056v1 C 0 I 18 s manLeu1.NW_012102020v1 1450019 14 + 1977891 -tga----------ccaaggtggtc------------------ i manLeu1.NW_012102020v1 C 0 I 18 s calJac3.chr17 73861744 43 + 74750902 ctgatgacctgggcccaaggtaggcggggcacagcctgggttc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17300382 43 - 17725628 ctggcgacgtgcgcccaaggtaggcggggcacagcctgggttc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6393814 43 + 6778120 ctgatgacatgggcccaaggtaggcggggcacagcctgggttc i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e chlSab2.chr15 91378479 32 + 91754291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=2485185.000000 s hg38.chr3_KI270934v1_alt 76507 427 + 163458 atacgttttagggagacatgagacatcaatcaacacatgtaagatgaacattggttcagtctggaaaaggccgggcaacgccaagcaaacgtgggacaactcgcagccaggagaaagcttccaggtcacaggtgggtgagagacaaa-ggtcgcattcttttgagtttctgatgggcctttccaaagaaggcaatcagatatgcatctatctcagtgagcag-ggggtgattttgaatagaatggggggcaggtcggccctaagccattcccggcttgactttcccctttagcttagtgactttgggggcccaagatttattttcctttcacaAAACAATAAACATAACAAATAAGTGAATTATAGAAAGGTGAAAACTATGG--AAAAAAAAGAAAAACAG---GGAGAAAGAATCCTGAACACTGACGTGGG s panTro5.chr3 2548784 427 - 202621043 atacgttttagggagacatgagacatcaatcaacatatgtaagatgaacattggttcagtctggaaaaggccgggcaacgccaagcaaacgtgggacaactcgcagccaggagaaagcttccaggtcacaggtgggtgagagacaaa-ggtagcattcttttgagtttctgatgggcctttccaaagaaggcaatcagatatgcatctatctcagtgagcag-ggggtgattttgaatagaatggggggcaggttggccctaagccgttcccagcttgactttcccctttagcttagtgattttgggggcccaagatttattttcctttcacaAAACAATAAACATAATAAATAAGTGAATTATAGAAAGGTGAAAACTATGG--AAAAAAAAGAAAAACAG---AGAGAAAGAATCCTGAACACTGACGTGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 138542 427 - 190779 atacgttttagggagacatgagacatcaatcaacatatgtaagatgaacattggttcagtctggaaaaggccgggcaacgccaagcaaacgtgggacaactcgcagccaggagaaagcttccaggtcacaggtgggtgagagacaaa-ggtagcattcttttgagtttctgatgggcctttccaaagaaggcaatcagatatgcatctatctcagtgagcag-ggggtgattttgaatagaatggggggcaggttggccctaagccgttcccagcttgactttcccctttagcttagtgattttgggggcccaagatttattttcctttcacaAAACAATAAACATAATAAATAAGTGAATTATAGAAAGGTGAAAACTATGG--AAAAAAAAGAAAAACAG---AGAGAAAGAATCCTGAACACTGACGTGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 89500 425 - 106623 atacattttagggagacatgagacatcaatcaacatatgtaagatgaacattggttcagtctggaaaaggcagggcaacgccaagcaaacgtgggacaactcgcagccagga-aaagcttccaggtcacaggt-ggtgagagacaaa-ggtagcattcttttgagtttctgatgggcctttccaaagaaggcaatcagatatgcatctatctcagtgagca--ggggtgattttgaatagaat-gggggcaggttggccctaagccattcccagcttgactttaccctttagcttagtgattttgggggcccaagatttattttcctttcacaAAACCATGAACATAATAAATAAGTGAATTATAGAAAGGTGAAAACTATGGAAAAAAAAAAGAAAAACAG---GGAGAAAGAATCCTGAGCACTGACATGGG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2368781 427 - 204787373 acacattgtagggagacaagagacatcaatcagcatatgtaagatgaacattggttcggtctggaaaaggcagggcaacgccaagcaaaggtggcacaactcgaagccaggagaaagcttccaggtcacaggtgggtgagagacaaacggttacgttctttggagtttctgatgagtctctccaaagacggcactgagaaacgcatctatctcagtgagcag-ggggtgattttcaatagaatcgggggcaggttggccctaagccgttcccagcttgactttcccctttagcttagtgattttgggggcccaagatttattctcctttcacaAAACAATAAGTATAATAAATAAGTGAATTATAGAAAGGTGAAAACTATGG---GAAAAAAGAAAAACAG---GGAGAAAGAATCCTGAGCACTGACGTGGG i rheMac8.chr2 I 18 C 0 s macFas5.chr2 192434651 427 - 192460366 acacattgtagggagacaagagacatcaatcagcatatgtaagatgaacattggttcggtctggaaaaggcagggcaacgccaagcaaaggtggcacaactcgaagccaggagaaagcttccaggtcacaggtgggtgagagacaaacggttacgttctttggagtttctgatgagtctctccaaagacggcactgagaaacgcatctatctcagtgagcag-ggggtgattttcaatagaatcgggggcaggttggccctaagccgttcccagcttgactttcccctttagcttagtgattttgggggcccaagatttattctcctttcacaAAACAATAAATATAATAAATAAGTGAATTATAGAAAGGTGAAAACTATGG---GAAAAAAGAAAAACAG---GGAGAAAGAATCCTGAGCACTGACGTGGG i macFas5.chr2 I 18 C 0 s macNem1.NW_012014355v1 19174687 427 - 19675229 acacattgtagggagacaagagacatcaatcagcatacgtaagatgaacattggttcggtctggaaaaggcagggcaacgccaagcaaaggtggcacaactcgaagccaggagaaagcttccaggtcacaggtgggtgagagacaaacggttacgttctttggagtttctgatgagtctctccaaagacggcactgagaaacgcatctatctcagtgagcag-ggggtgattttcaatagaatcgggggcaggttggccctaagccgttcccagcttgactttcccctttagcttagtgattttgggggcccaagatttattctcctttcacaAAACAATAAATATAATAAATAAGTGAATTATAGAAAGGTGAAAACTATGG---GAAAAAAGAAAAACAG---GGAGAAAGAATCCTGAGCACTGACGTGGG i macNem1.NW_012014355v1 I 18 C 0 s cerAty1.NW_012004056v1 16410721 427 - 16847902 acacattgtagggagacaagagacatcaatcagcatatggaagatgaacattggttcggtctggaaaaggcagggcaacgccaagcaaaggtggcacaactcgaagccaggagaaagcctccaggtcacaggtgggtgagagacaaacggttacgttctttggagtttctgatgagcctctccaaagacggcaatcagatacgcatctatctcagtgagcag-ggggtgattttcaatagaatcgggggcaggttggccctaagccgttcccagcttggctttcccctttagcttagcgattttggcggcccaagatttattctcctttcacaAAACAATAAATATAATAAATAAGTGAATTATAGAAAGGTGAAAACTATGG---GAAAAAAGAAAAACAG---GGAGAAAGAATCCTGAGCACTGACGTGGG i cerAty1.NW_012004056v1 I 18 C 0 s chlSab2.chr15 91378511 428 + 91754291 acacattgtagggagacaagagacatcaatcagcatacgtaagatgaacattggttcgatctggaaaaggcagggcaatgccaagcaaaggtggcacaacacaaagccaggagaaagcttccaggtcacaggtgggtgagagacaaacagttatgttctttagagtttctgatgagcctctccaaagacggcaatcagatacgcatctatctcagtgagcag-ggggtgattttcaatagaatcgggggcaggttggccctaagccattcccagcttgactttcccctttagcttagtgattttgggggcccaagatttattctcctttcacaAAACAATAAATATAATAAATAAGTGAATTATAGAAAGGTGAAAACTATGG--AAAAAAAAGACAAACAG---GGAGAAAGAATCCTGAGCACTGACGTGGG i chlSab2.chr15 I 32 C 0 s manLeu1.NW_012102020v1 1450051 426 + 1977891 acacattgtagggagacaagagacatcaatcagcatatggaagatgaacattggttcggtctggaaaaggcagggcaacgccaagcaaaggtggcacaactcgaagccaggagaaagcctccaggtcacaggtgggtgagagacaaacggttacgttctttggagtttctgatgagcctctccaaagacggcactgagaaacgcatctatctcagtgagcag-ggggtgattttcaatagaatc-agggcaggttggccctaagccgttcccagcttgactttcccctttagcttagtgattatgggagcccaagatttattctcctttcacaAAACAATACATATAATAAATAAGTGAATTATAGAAAGGTGAAAACTATGG---GAAAAAAGAAAAACAG---GGAGAAAGAATCCTGAGCACTGACGTGGG i manLeu1.NW_012102020v1 I 18 C 0 s calJac3.chr17 73861787 427 + 74750902 atacattttagggagacacgagacatcaatcaatatatgtaagaggaacattggttcagcctggaaaaggagggacaactccaagcaaaggtgggacaactggaagccagtagcaggcttccaggtcgcaggtagagaagagacacagggctgcattcttccgagtgtctgatcagcctctccaaaggaggcagttaaatatgcgtttatctcggtgagcagaggggtgactttggacagaacgggaggcaggtctgcccgaagcggttcccagcttgacttttcccttcagcttagtgactttggggccccaagatttattttcctttcacaAAACAATAAATGTAATATGTAAGTGAATTATTGAAAGGTGAAAACTATGG---AAAAAAATAAAAAAA----GGAGAAAGAATCATGAACACTGACATGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17300425 405 - 17725628 atacgttgtaggaaaacacgagac----atcaatatatgtaagaggaacataggttcagcctgga---------------------aaaggtgggacagctggaggccagtagcaggcttccaggccacaggcagagaagagacacagggctgagtgcttctgagtttctgatcagcctctccaaaggaggcaactcaacatgtg-ttacctcagtgagcagaggggagactctggacagaacaggaggtgggtctgcccgaagcagttcccagctggacttttcccttcagcttagtgactttggggccccaagatttattttcctttcacaAAACAATAAATGTCATAAATCAGTGAATTATTGAAAGGTGAAAACTATGG---AAAAAAAAAAAAGAAAACGGGAGAAAGAATCATGAACACTGACGTGAG i saiBol1.JH378146 C 0 I 2 s cebCap1.NW_016107444v1 6393857 420 + 6778120 atacattttagggagac-----acatcaatcaatatatgtaagaggaacattggttcagcctggaaaaggtggaacaactccaagcaaaggtgggacagctggaagccagcagcaggcttccaggtcacaggtagagaagagacacatggctgcattcttctgagtttctgattagcctctccaaaggaggcaattaaatatgtgtttatctcagcgagcagaggggtgactttggacagaatgggaggcaggtctgcccgaagcagttcccagcttgacttttcccttcagcgtaatgactttggggccccaagatttattttcctttcacaAAACAATAAATGTAATAAATAAGTGAATAATTGAAAGGTGTAAACTATGG---AAAAAAGAAAAAA------GGAGAAAGAATCGTGAACGCTGACGTGGG i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=113284.000000 s hg38.chr3_KI270934v1_alt 76934 27 + 163458 --GAGGGCA-GGTGCCAGCTGCAGTACTAA s panTro5.chr3 2549211 28 - 202621043 --GAGGGCAGGGTGCCAGTTGCAGTACTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 138969 28 - 190779 --GAGGGCAGGGTGCCAGTTGCAGTACTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 89925 28 - 106623 --AGTGCAGGGGTGCCAGTTGCAGTACTAA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2369208 27 - 204787373 --GAGGGCA-GGTGCCAGCTGCAGAACTAA i rheMac8.chr2 C 0 I 21 s macFas5.chr2 192435078 26 - 192460366 --GAGGGCA-GGTGCCAGCTGCAGAACTA- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19175114 27 - 19675229 --GAGGGCA-GGTGCCAGCTGCAGAACTAA i macNem1.NW_012014355v1 C 0 I 21 s cerAty1.NW_012004056v1 16411148 27 - 16847902 --GAGGGCA-GGTGCCAACTGCAGAACTAA i cerAty1.NW_012004056v1 C 0 I 21 s chlSab2.chr15 91378939 27 + 91754291 --GAGGGCA-GGTGCCAGCTGCAGAACTAA i chlSab2.chr15 C 0 I 21 s manLeu1.NW_012102020v1 1450477 27 + 1977891 --GAGGGCA-GGTGCCAACTGCAGAACTAA i manLeu1.NW_012102020v1 C 0 I 21 s calJac3.chr17 73862214 26 + 74750902 CTGGGG----GGTGCCAGCTGCAGTACTAA i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 6394277 26 + 6778120 TTGGGG----GGTGCCAGTTGCAGTACTAA i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e saiBol1.JH378146 17300830 2 - 17725628 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=9150.000000 s hg38.chr3_KI270934v1_alt 76961 6 + 163458 ATAGCA s panTro5.chr3 2549239 6 - 202621043 ATAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 138997 6 - 190779 ATAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 89953 6 - 106623 ATAgca i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192435104 6 - 192460366 ATAGCG i macFas5.chr2 C 0 C 0 s calJac3.chr17 73862240 6 + 74750902 AGAGCA i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 6394303 6 + 6778120 GTAGCA i cebCap1.NW_016107444v1 C 0 I 2670 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=1000.000000 s hg38.chr3_KI270934v1_alt 76967 1 + 163458 G s panTro5.chr3 2549245 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139003 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 I 2 s gorGor5.CYUI01000576v1 89959 1 - 106623 g i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192435110 1 - 192460366 G i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e calJac3.chr17 73862246 0 + 74750902 C e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=1407.000000 s hg38.chr3_KI270934v1_alt 76968 3 + 163458 AGG s panTro5.chr3 2549246 3 - 202621043 GGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 89960 3 - 106623 ggg i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192435111 3 - 192460366 GGG i macFas5.chr2 C 0 I 2 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e calJac3.chr17 73862246 0 + 74750902 C e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I e panPan2.chrUn_NW_014024201v1 139004 2 - 190779 I a score=4910.000000 s hg38.chr3_KI270934v1_alt 76971 5 + 163458 GGAGG s panTro5.chr3 2549249 5 - 202621043 GGAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139006 5 - 190779 GGAGG i panPan2.chrUn_NW_014024201v1 I 2 C 0 s gorGor5.CYUI01000576v1 89963 5 - 106623 ggagg i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192435116 5 - 192460366 GGAGG i macFas5.chr2 I 2 T 60 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e calJac3.chr17 73862246 0 + 74750902 C e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=9870.000000 s hg38.chr3_KI270934v1_alt 76976 19 + 163458 GCAGGTACCAACTGCAGTA s panTro5.chr3 2549254 19 - 202621043 GCAGGTGCCAGCTGCAGTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139011 19 - 190779 GCAGGTGCCAGCTGCAGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 89968 19 - 106623 gcaggtgccagctgcagtg i gorGor5.CYUI01000576v1 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e calJac3.chr17 73862246 0 + 74750902 C e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e macFas5.chr2 192435121 60 - 192460366 T e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=5489.000000 s hg38.chr3_KI270934v1_alt 76995 14 + 163458 CTAAATACTGGTGT s panTro5.chr3 2549273 14 - 202621043 CTAAATACTGGTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139030 14 - 190779 CTAAATACTGGTGT i panPan2.chrUn_NW_014024201v1 C 0 T 40 s gorGor5.CYUI01000576v1 89987 12 - 106623 ctaaatagcagg-- i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192435061 14 - 192460366 CTGAGCACTGACGT i macFas5.chr2 T 60 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e calJac3.chr17 73862246 0 + 74750902 C e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=2000.000000 s hg38.chr3_KI270934v1_alt 77009 2 + 163458 GG s panTro5.chr3 2549287 2 - 202621043 GG i panTro5.chr3 C 0 I 78 s panPan2.chrUn_NW_014024201v1 139004 2 - 190779 GG i panPan2.chrUn_NW_014024201v1 T 40 C 0 s gorGor5.CYUI01000576v1 89999 2 - 106623 gg i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192435075 2 - 192460366 GG i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e calJac3.chr17 73862246 0 + 74750902 C e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=22090.000000 s hg38.chr3_KI270934v1_alt 77011 28 + 163458 GGAGGGCAGGTGCCAGCTGCAGTACTAA s panTro5.chr3 2549367 25 - 202621043 GGAGGGCAGGTGCCAGTTGCAGTGC--- i panTro5.chr3 I 78 C 0 s panPan2.chrUn_NW_014024201v1 139006 28 - 190779 GGAGGGCAGGTGCCAGCTGCAGTACTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 90001 28 - 106623 ggagggcaggtgccagctgcagTACTAA i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192435077 28 - 192460366 GGAGGGCAGGTGCCAGCTGCAGAACTAA i macFas5.chr2 C 0 T 32 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e calJac3.chr17 73862246 0 + 74750902 C e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=2129.000000 s hg38.chr3_KI270934v1_alt 77039 12 + 163458 ATACTGCTGTGC s panTro5.chr3 2549392 4 - 202621043 --------GTGG i panTro5.chr3 C 0 T 107 s panPan2.chrUn_NW_014024201v1 139034 12 - 190779 ATACTGGTGTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 90029 12 - 106623 ATACTGGCATGG i gorGor5.CYUI01000576v1 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e calJac3.chr17 73862246 0 + 74750902 C e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e macFas5.chr2 192435105 32 - 192460366 T e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=27897.000000 s hg38.chr3_KI270934v1_alt 77051 63 + 163458 GGAGGGCAGGTGCCAGCTG-CAGTACTAAATA--GCAGAGGGGAGGGCAGGTG-CCAGCTGCAGTAC s panTro5.chr3 2549289 63 - 202621043 GGAGGGCAGGTGCCAGCTG-CAGTACTAAATA--GCAGAGGGGAGGGCAGGTG-CCAGCTGTAGTAC i panTro5.chr3 T 107 C 0 s panPan2.chrUn_NW_014024201v1 139046 63 - 190779 GGAGGGCAGGTGCCAGCTG-CAGTACTAAATA--GCAGAGGGGAGGGCAGGTG-CCAGCTGCAGTGC i panPan2.chrUn_NW_014024201v1 C 0 T 78 s gorGor5.CYUI01000576v1 90041 66 - 106623 GGAGGGCAGGTGCCAGCTGCCAGTACTGAATACTGGCGTGGGGAGGGCAGGTGCCCAGCTGCA-TAC i gorGor5.CYUI01000576v1 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e calJac3.chr17 73862246 0 + 74750902 C e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e macFas5.chr2 192435105 32 - 192460366 T e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=18299.000000 s hg38.chr3_KI270934v1_alt 77114 38 + 163458 CAAATACTGGTGTGGGGAGGGCAGGTGCCAGCTGCAGT s panTro5.chr3 2549352 38 - 202621043 CAAATACTGGTGTGGGGAGGGCAGGTGCCAGTTGCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139031 38 - 190779 TAAATACTGGTGTGGGGAGGGCAGGTGCCAGCTGCAGT i panPan2.chrUn_NW_014024201v1 T 78 C 0 s gorGor5.CYUI01000576v1 90107 37 - 106623 TAAATACTGGTGT-GGGAGGGCAGGTACAAGTTGCAGT i gorGor5.CYUI01000576v1 C 0 I 287 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e calJac3.chr17 73862246 0 + 74750902 C e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e macFas5.chr2 192435105 32 - 192460366 T e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=-702.000000 s hg38.chr3_KI270934v1_alt 77152 3 + 163458 GC---------G s panTro5.chr3 2549390 3 - 202621043 GC---------G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139069 12 - 190779 ACTAAATAGCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e calJac3.chr17 73862246 0 + 74750902 C e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e macFas5.chr2 192435105 32 - 192460366 T e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I e gorGor5.CYUI01000576v1 90144 287 - 106623 I a score=13380.000000 s hg38.chr3_KI270934v1_alt 77155 24 + 163458 TGGGGAGGGCAGGTGCCAGCTGCA s panTro5.chr3 2549393 24 - 202621043 TGGGGAGGGCAGGTGCCAGCTGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139081 24 - 190779 AGGGGAGGGCAGGTGCCAGCTGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 90431 24 - 106623 TGGGGAGGGCAGGTGCCAGCTGCA i gorGor5.CYUI01000576v1 I 287 I 225 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e calJac3.chr17 73862246 0 + 74750902 C e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e macFas5.chr2 192435105 32 - 192460366 T e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=873.000000 s hg38.chr3_KI270934v1_alt 77179 3 + 163458 GTG s panTro5.chr3 2549417 3 - 202621043 GTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139105 3 - 190779 GTG i panPan2.chrUn_NW_014024201v1 C 0 I 1 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e calJac3.chr17 73862246 0 + 74750902 C e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e macFas5.chr2 192435105 32 - 192460366 T e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I e gorGor5.CYUI01000576v1 90455 225 - 106623 I a score=29.000000 s hg38.chr3_KI270934v1_alt 77182 1 + 163458 T s panTro5.chr3 2549420 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139109 1 - 190779 T i panPan2.chrUn_NW_014024201v1 I 1 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e calJac3.chr17 73862246 0 + 74750902 C e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e macFas5.chr2 192435105 32 - 192460366 T e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I e gorGor5.CYUI01000576v1 90455 225 - 106623 I a score=1746.000000 s hg38.chr3_KI270934v1_alt 77183 3 + 163458 GTG s panTro5.chr3 2549421 3 - 202621043 GTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139110 3 - 190779 GTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 192435073 3 - 192460366 GTG i macFas5.chr2 T 32 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e calJac3.chr17 73862246 0 + 74750902 C e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I e gorGor5.CYUI01000576v1 90455 225 - 106623 I a score=27806.000000 s hg38.chr3_KI270934v1_alt 77186 35 + 163458 GGGAGGGCAGGTGCCAGCTGCAGTACTAAATAGCG s panTro5.chr3 2549424 35 - 202621043 GGGAGGGCAGGTGCCAGCTGCAGTACTCAATAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139113 35 - 190779 GGGAGGGCAGGTGCCAGCTGCAGTACTCAATAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 90680 35 - 106623 GGGAGGGCAGGTGCCAGCTGCAGTGCTAAATAGCC i gorGor5.CYUI01000576v1 I 225 C 0 s macFas5.chr2 192435076 34 - 192460366 GGGAGGGCAGGTGCCAGCTGCAGAACT-AATAGCG i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e calJac3.chr17 73862246 0 + 74750902 C e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=2130.000000 s hg38.chr3_KI270934v1_alt 77221 4 + 163458 -GGGG s panTro5.chr3 2549459 4 - 202621043 -GGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139148 4 - 190779 -GGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 90715 4 - 106623 -GGGG i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192435110 4 - 192460366 -GGGG i macFas5.chr2 C 0 I 7 s calJac3.chr17 73862246 4 + 74750902 CGTG- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=910.000000 s hg38.chr3_KI270934v1_alt 77225 1 + 163458 A s panTro5.chr3 2549463 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139152 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 90719 1 - 106623 A i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 73862250 1 + 74750902 A i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e macFas5.chr2 192435114 7 - 192460366 I e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=1475.000000 s hg38.chr3_KI270934v1_alt 77226 3 + 163458 AGA- s panTro5.chr3 2549464 3 - 202621043 AGA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139153 3 - 190779 AGA- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 90720 3 - 106623 AGA- i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192435121 3 - 192460366 AGA- i macFas5.chr2 I 7 C 0 s calJac3.chr17 73862251 3 + 74750902 -GAT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e saiBol1.JH378146 17300830 2 - 17725628 I e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=1256.000000 s hg38.chr3_KI270934v1_alt 77229 2 + 163458 TT s panTro5.chr3 2549467 2 - 202621043 TT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139156 2 - 190779 TT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 90723 1 - 106623 -T i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192435124 2 - 192460366 CG i macFas5.chr2 C 0 C 0 s calJac3.chr17 73862254 2 + 74750902 TT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17300832 2 - 17725628 TT i saiBol1.JH378146 I 2 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175141 21 - 19675229 I e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e manLeu1.NW_012102020v1 1450504 21 + 1977891 I e chlSab2.chr15 91378966 21 + 91754291 I e cerAty1.NW_012004056v1 16411175 21 - 16847902 I e rheMac8.chr2 2369235 21 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=467206.000000 s hg38.chr3_KI270934v1_alt 77231 88 + 163458 TTTTTCTGAGCAACTTTGAGTCACTGCTCACATCTcatgccaatgtattaatcccaag-tcaagggtcagatgaggcactcggatctct s panTro5.chr3 2549469 88 - 202621043 TTTTTCTGAGCAACTTCGAGTCACTGCTCACATCTcatgccaatgtattaatcccaag-tcaagggtcagatgaggcactcggatctct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139158 88 - 190779 TTTTTCTGAGCAACTTCGAGTCACTGCTCACATCTcatgccaatgtattaatcccaag-tcaagggtcagatgaggcactcggatctct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 90724 87 - 106623 TTTTTCTGAGCAACTTTGAGTCACTGCTCACATCTcatgccaatgtatt-atcccaag-tcaagggtcagatggggcacctggatctct i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2369256 88 - 204787373 TTTTTCGGAGCAACTTCGAGTCACTGCTCACATCTcatgccaatatattaatcccaag-tcaagggtcagatggggcacctggatctct i rheMac8.chr2 I 21 C 0 s macFas5.chr2 192435126 88 - 192460366 TTTTTCGGAGCAACTTCGAGTCACTGCTCACATCTcatgccaatatattaatcccaag-tcaagggtcagatggggcacctggatctct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19175162 88 - 19675229 TTTTTCGGAGCAACTTCGAGTCACTGCTCACATCTCATGTCAATATATTAATCCCAAG-TCAAGGGTCAGATGGGgcacctggatctct i macNem1.NW_012014355v1 I 21 C 0 s cerAty1.NW_012004056v1 16411196 88 - 16847902 TTTTTCGGAGCAACTTCGAGTCACTGCTCACATCTcatgccaatgtattaatcccaag-ccaagggtcaaatggggcacctggatctct i cerAty1.NW_012004056v1 I 21 C 0 s chlSab2.chr15 91378987 88 + 91754291 TTTTTCGGAGCAACTTCGAGTCACTGCTCACATCTcatgccaatgtattaatcccaag-tcaagggtcagatggggcacctggatctct i chlSab2.chr15 I 21 C 0 s manLeu1.NW_012102020v1 1450525 88 + 1977891 TTTTTCGGAGCAACTTCGAGTCACTGCTCACATCTcatgccaatgtattaatcccaag-tcaagggtcagatggggcacctggatctct i manLeu1.NW_012102020v1 I 21 C 0 s calJac3.chr17 73862256 88 + 74750902 TTCCTCTGAGCAACTTTGAGTCATTGCTCAGATCTcatgctgatacataaaaccccaa-tcaagggtcagatggggcgcttgggtctct i calJac3.chr17 C 0 I 4660 s saiBol1.JH378146 17300834 89 - 17725628 TTCCTCTGAGCAGCTTCGAGTCATCGCTCAAATCTcatgccaatacataaaaccccaagtcaagggtcagacggggtgcttggatcgct i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=1174538.000000 s hg38.chr3_KI270934v1_alt 77319 313 + 163458 ccagttgccaacacag--ctcttccaagtgtactttacttcctttcattcctgctctaaaac----------------tttatttatgtatttat----ttttgagacagaatcttgctctgtcgcctgggctggagtg-cagtggcacaatcccagttcactgcaacctctgcctctggga-tcaggcaattctcctgcctcagcttcctaagcagctgggataacaggtgtgcaccaccgtgcttggctaat-----tttttttttcttttttcgtatttttagtagagatggggtttcaccatattagccatgatggtctcgtacttctgacctcaggt s panTro5.chr3 2549557 312 - 202621043 ccagttgccaacacgg--ctcttccaagtgtactttacttcctttcattcctgttctaaaac----------------tttatttatgtatttat----ttttgagacagaatcttgctctgtcgcctaggctggagtg-cagtggcgcaatcccagttcactgcaacctctgcctctggga-tcaggcgattctcctgcctcagcttcctaagcagctgggataacaggcgtgcaccaccgtgcttggctaa------tttttttttcttttttcatatttttagtagagatggggtttcaccatattagccaggatggtctcgtacttctgacctcaggt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139246 312 - 190779 ccagttgccaacacgg--ctcttccaagtgtactttacttcctttcattcctgttctaaaac----------------tttatttatgtatttat----ttttgagacagaatcttgctctgtcgcctaggctggagtg-cagtggcgcaatcccagttcactgcaacctctgcctctggga-tcaggcgattctcctgcctcagcttcctaagcagctgggataacaggcgtgcaccaccgtgcttggctaa------tttttttttcttttttcatatttttagtagagatggggtttcaccatattagccaggatggtctcgtacttctgacctcaggt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 90811 313 - 106623 ctagttgccaacacgg--ctcttccaagt-tactttacttcctttcattcctgctctaaaac----------------tttattcatttatttattta-ttttgagacagagtcttgctctgtcgcctaggctggagtgccagtggtgcaatcccagttcactgcgacctctgcctctggat-tcaagcgattctcctgcctcagcttcctgagcagctgggataacaggcacgcaccaccatgcttggcttaa-----tttttttttattttt--gtatttttagtagagatggggtttcaccatattagccagg-tggtcccgtactcctaacctcaggt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2369344 314 - 204787373 ccagttgcccacgtgg--ctcttccaagtgtattttacttcctttcattcctgctctaaaac-ttA-ttattta----tttatttatttatttatttatttatgagacagagtcttgctccgtcacccaggctggagtg-cagtggcacaatcccagttcactgcagtctctgcctctgggattcaagcaattctcctgcctcagcttcctgagc-tctgggataacaggcacgcaccaccatgcttggctaa------tatatttttgtgtgtgtgtatttttagtagagacggggtttcaccatattagccaggatggtcccatactc------------ i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192435214 315 - 192460366 ccagttgcccacgtgg--ctcttccaagtgtactttacttcctttcattcctgctctaaaacttta-ttattta----tttatttatttatttatttatttatgagacagagtcttgctccgtcacccaggctggagtg-cagtggcacaatcccagttcactgcagtctctgcctctgggattcaagcaattctcctgcctcagcttcctgagc-tctgggataacaggcacgcaccaccatgcttggctaa------tatatttttttgtgtgtgtatttttagtagagacggggtttcaccatattagccaggatggtcccatactc------------ i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19175250 311 - 19675229 ccagttgcccacgtgg--ctcttccaagtgtactttacttcctttcattcctgctctaaaacttta-----tta----tttatttatttatttatttatttatgagacagagtcttgctctgtcacccaggctggagtg-cagtggcacaatcccagttcactgcagtctctgcctctgggattcaagcaattctcctgcctcagcttcctgagc-tctgggataacaggcatgcaccaccatgcttggctaa------tatatttttttttgtgtgtatttttagtagagacggggtttcaccatattagccaggatggtcccatactc------------ i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16411284 307 - 16847902 ccagttgcccacgtgg--ctcttccaagtgtactttacttcttttcattcctgctctaaaac----------------tttatttatttatttatttatttatgagacagagtcttgctctgtcacccaggctggagta-cagtggcacaatcccagttcactgcagtctctgcctctgggattcaagagattctcctgcctcagcttcctgagc-tctgggataacaggcacgcaccaccatgcttggctaat---tttttttttttttttttttgtatttttagtagagatggggtttcaccatattagccaggatcgtcccatactt------------ i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91379075 324 + 91754291 ccagttgcccacgtgg--ctcttccaagtgtactttacttcctttcattcctgctctaaaactttatttatttatttatttatttatttatttatttatttatgagacagagtcttgctctgtcacccaggctggagtg-cagcagcacaatcccagttcactgcagtctctgcctctaggattcaagcgattctcctgcctcagcttcctgagc-tctgggataacaggcacgcaccaccatgcttggttaatttttttat-ttttta-ttttttgtatttttagtagagacggggtttcaccatattagccaggatggtcccatactc------------ i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1450613 321 + 1977891 ccagttgcccacgtgg--ctcttccaagtgtactttacttcctttcattcctgctctaaaactttatttattta-----ttatttatttatttatttatttatgagacagagtcttgctctgtcacccaggctggagtg-cagtggcacaatcccagttcactgcagtctctgcctctgggattcaagcaattctcctgcctcagcttcctgagc-tctggaataacaggcatgcaccaccatgcttggctaatatatatatatatatatttttttgtatttttagtagagacggggtttcaccgtattagccaggatggtcccatactc------------ i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 17300923 299 - 17725628 cagcttgcccacgtgactctcttccaaatg-----tgcttcctttcatgcctgctctaaaat----gttgtgta----tgtatttatttgtttatttatttttgagacagagtcttgctgtatcgccaaggctggagtg-cagtgctgcaatcccagttcactgcagcctctgtctctgggagtcaagcgattctcctgccttagcctcccaagcagctgagattacaggtgc-tgccaccatgcctggctaa------ttttttttt----------------------gatggggtttcaccatgttggccaagctggtcctgaacttctgacctcaggt i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e calJac3.chr17 73862344 4660 + 74750902 I e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7386098 1661 - 7796314 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=398537.000000 s hg38.chr3_KI270934v1_alt 77632 75 + 163458 gatccacctgctttagccccccaaagtgctgggattacaggtgtgagccaccacgcccagccCTGGCCAACtttt s panTro5.chr3 2549869 75 - 202621043 gatccacctgctttagcctcccaaagtgctgggattacaggtgtgagccaccacgcccagccCTAGCCAACtttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139558 75 - 190779 gatccacctgctttagcctcccaaagtgctgggattacaggtgtgagccaccacgcccagccCTAGCCAACtttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 91124 74 - 106623 gatctgcctgcctcag-ctcccaaagtgctgggattacaggtgtgagccaccacgcccggccCTAGCCAACtttt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2369658 75 - 204787373 gatccacctgccccagcctcccaaagtgctaagattataggtgtgagccaccacgcccggcTCTAGCCAACtttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192435529 75 - 192460366 gatccacctgccccagcctcccaaagtgctaagattataggtgtgagccaccacgcccggcTCTAGCCAACtttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19175561 75 - 19675229 gatccacctgccccagcctcccaaagtgctgagattataggtgtgagccaccacgcccggcTCTAGCCAACtttt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16411591 75 - 16847902 gatccacctgccccagcctcccgaagtgctgggattataggtgtgagcctccatgcccggcTCTAGCCAACtttt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91379399 75 + 91754291 gatccacctgccccagcctcccaaagtgctgagattatgggtgtcagcctccatgcctggcTCTAGCCAACtttt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1450934 75 + 1977891 gatccacctgcctcagcctcccaaagtgctgagattataggtgtgagccaccacgcccggcTCTAGCCAACtttt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7387759 75 - 7796314 gatccacctgcctcggcctcccaaagtgctgggattataggtgtgagccaccacgcctggcTCTAGCCAACtttt i colAng1.NW_012118932v1 I 1661 C 0 s saiBol1.JH378146 17301222 75 - 17725628 gatcggcccaccttggcctcccaaagtgctgggattataggtgtgagccacctggcccggacccagacaacttct i saiBol1.JH378146 C 0 I 1834 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e calJac3.chr17 73862344 4660 + 74750902 I e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=1376521.000000 s hg38.chr3_KI270934v1_alt 77707 300 + 163458 gttttttttgagacagagtttcattcttattgcccaggctggagtgcgatggcccaatcttggctcactgcaacctctgcctcccaggttTGTAGGATATAATAAATTCTTCTTCAAAGGTTTTAGCCTGTAAATtgttaagtacaatgagttctgagatcctctccaaagaatcaatgtatcagtatgttcagctcttca---------------------------------------------------------------------ttttaaagtttaacttcctcgttttcttcatctccttgcccctagtttcagtaaacaaccccctcctagcctctatcacctgctccatcctgagtcacc s panTro5.chr3 2549944 298 - 202621043 g-tttttttgagacagagtttcattcttattgcccaggctggagtgcgatggcccaatcttggctcactgcaacctctgcctcccaggttTGTAGGATATAATAAATTCCTCTTCAAAGGTTTTAGCCTGTAAATtgttaagtacaatg-gttctgagatcctctccaaagagtcaatgtatcagtatgttcagctcttca---------------------------------------------------------------------ttttaaagtttaacttcctcgttttcttcatctccttgcccctagtttcagtaaacaaccccctcctagcctctatcacctgctccatcctgagtcacc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139633 367 - 190779 g-tttttttgagacagagtttcattcttattgcccaggctgcagtgcgatggcccaatcttggctcactgcaacctctgcctcccaggttTGTAGGATATAATAAATTCCTCTTCAAAGGTTTTAGCCTGTAAATtgttaagtacaatg-gttctgagatcctctccaaagagtcaatgtatcagtatgttcagctcttcattttaaagtttaacttcctcgttttcttcctctccaaagattcaatgtatcagtatgttcagctcttcattttaaagtttaacttcctcgttttcttcatctccttgcccctagtttcagtaaacaaccccctcctagcctctatcacctgctccatcctgagtcacc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 91198 298 - 106623 g-tttttttgagacagagtttcattcttgtcgcccaggctggagtgcaatggcccgatcttggctcacttcaacctctgcctcccgggttTGTA-GATATAATAAATTCCTCTTCAAAGGTTTTAGCCTGTAAAAtgttaagtacaatgagttctgagatcctctccaaagaatcaatgtatcagtatgttcagctcttca---------------------------------------------------------------------ttttaaagtttaacttccttgttctcttcatctccttgcccctagtttcagtaaacaaccccctcccagcctctatcacctgctccatcctgagtcatc i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2369733 295 - 204787373 g-tttttttgagatggagtttcattcttgttgcccagactggagtgcaatggcacaatcttggctcactgcaacctccacctcctgggttTGTAGGATATAATAAATTCCTCTTCAAAGGTTTTAGCCTGTAAATtgttaagtacaacgagttctgagatcctctccaaa----cagtgtgtcagtacgttcagctcttca---------------------------------------------------------------------ttttaaagtttaacttcctcgttttcttcatctccttgcccctagtttcagtaaacaaccccctcctagcctctatctcctgctccatcctgagtcacc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192435604 295 - 192460366 g-tttttttgagatggagtttcattcttgttgcccagactggagtgcaatggcacaatcttggctcactgcaacctccacctcctgggttTGTAGGATATAATAAATTCCTCTTCAAAGGTTTTAGCCTGTAAATtgttaagtacaatgagttctgagatcctctccaaa----cagtgtgtcagtacgttcagctcttca---------------------------------------------------------------------ttttaaagtttaacttcctcgttttcttcatctccttgcccctagtttcagtaaacaaccccctcctagcctctatctcctgctccatcctgagtcacc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19175636 287 - 19675229 g-tttttttgagatggagtttcattcttgttgcccagactggagtgcaatggcacaatcttggctcactgcaacctccacctcctgggttTGTAGGATATAATAAATTCCTCTTCAAAGGTTTTAGCCTGTAAATtgttaagtacaatgagttctgagatcctctccaaa------------cagtacgttcagctcttca---------------------------------------------------------------------ttttaaagtttaacttcctcgttttcttcatctccttgcccctagtttcagtaaacaaccccctcctagcctctatctcctgctccatcctgagtcacc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16411666 295 - 16847902 g-tttttttgagatggagtttcattcttgttgcccagactggagtgcaatggcacgatcttggctcactgcaacctccacctcctgggttTGTAGGATATAATAAATTCCTCTTCAAAGGTTTTAGCCTGTAAATtgttaagtacaatgagttctgagatcctctccaaa----cagtgtgtcagtacgttcagctcttca---------------------------------------------------------------------ttttaaagtttaacttcctcgttttcttcatctccttgcccctagtttcagtaaacaaccccttcctagcctctatctcctgctccatcctgagtcacc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91379474 299 + 91754291 g-tttctttgagatgcagtttcattcttgttgcccagactggagtgcaatggcacgatcttggctcactgcaacctccacctcctgggttTTTAGGATATAATAAATTCCTCTTCAAAGGTTTTAGCCTGTAAATtgttaagtacaatgagttctgagatcttctccaaacaatcagtgtgtcagtacgttcagctcttca---------------------------------------------------------------------ttttaaagtttaacttcctcgttttcttcatctccttgcccctagtttcagtaaacaaccccctcctagcctctatctcctgctccatcctgagtcacc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1451009 295 + 1977891 g-tttttttgagatggagtttcattcttgttgcccagactggagtgcaatggcacgatcttggctcactgcaacctccacctcctgggttTGTAGGATATAATAAATTCCTCTTCAAAGGTTTTAGCCTATAAATtgttaagtacaatgagttctgagatcctctccaaa----cagtgtgtcagtacgttcagctcttca---------------------------------------------------------------------ttttaaagtttaacttcctcgttttcttcatctccttgcccctagtttcagtaaacaaccccttcctagcctctatctcctgctccatcctgagtcacc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7387834 299 - 7796314 g-tttttctgagatggagtttcattcttgttgcccagactggagtgcaatggcatgatcttggctcattgcaacctccacctcctgggttTGTAGGATATAATAAATTCCTCTTCAAAGGCTTTAGCCTGTAAATtgataagtacgatgagttctgagatcctctccaaacaatcagtgtgtcagtacgttcagctcttca---------------------------------------------------------------------ttttaaaatttaacttcctcgttttcttcatctccttgcccctagtttcagtaaacaagcccctcctagcctctatctcccgctccatcctgagtcacc i colAng1.NW_012118932v1 C 0 I 992 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e saiBol1.JH378146 17301297 1834 - 17725628 I e calJac3.chr17 73862344 4660 + 74750902 I e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=142902.000000 s hg38.chr3_KI270934v1_alt 78007 37 + 163458 cccagtcacctgctctaatctgagtcatcctgagtca s panTro5.chr3 2550242 37 - 202621043 cccagtcacctgctctaatctgagtcatcctgagtca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140000 37 - 190779 cccagtcacctgctctaatctgagtcatcctgagtca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 91496 37 - 106623 cctggtcaactgctctgacctgagtcatcctgagtca i gorGor5.CYUI01000576v1 C 0 I 3041 s rheMac8.chr2 2370028 37 - 204787373 cctggtcacctgctctgacctgagtcatcctgagtca i rheMac8.chr2 C 0 I 1122 s macFas5.chr2 192435899 37 - 192460366 cctggtcacctgctctgacctgagtcatcctgagtca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19175923 37 - 19675229 cctggtcacctgctctgacctgagtcatcctgagtca i macNem1.NW_012014355v1 C 0 I 1045 s cerAty1.NW_012004056v1 16411961 37 - 16847902 cctggtcacctgctctgacctgagtcatcctgagtca i cerAty1.NW_012004056v1 C 0 I 923 s chlSab2.chr15 91379773 36 + 91754291 cc-ggtcacctgctctgacctgagtcatcctgagtca i chlSab2.chr15 C 0 I 1966 s manLeu1.NW_012102020v1 1451304 37 + 1977891 cctggtcacctgctctgacctgagtcatcctgagtca i manLeu1.NW_012102020v1 C 0 I 926 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e saiBol1.JH378146 17301297 1834 - 17725628 I e calJac3.chr17 73862344 4660 + 74750902 I e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7388133 992 - 7796314 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=3205.000000 s hg38.chr3_KI270934v1_alt 78044 3 + 163458 aca s panTro5.chr3 2550279 3 - 202621043 aca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140037 3 - 190779 aca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 94574 3 - 106623 aca i gorGor5.CYUI01000576v1 I 3041 C 0 s macFas5.chr2 192435936 3 - 192460366 cca i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 17303131 3 - 17725628 aca i saiBol1.JH378146 I 1834 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e aotNan1.NW_018503669v1 22522 9987 + 69927 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175960 1045 - 19675229 I e calJac3.chr17 73862344 4660 + 74750902 I e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7388133 992 - 7796314 I e manLeu1.NW_012102020v1 1451341 926 + 1977891 I e chlSab2.chr15 91379809 1966 + 91754291 I e cerAty1.NW_012004056v1 16411998 923 - 16847902 I e rheMac8.chr2 2370065 1122 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=2100.000000 s hg38.chr3_KI270934v1_alt 78047 1 + 163458 g s panTro5.chr3 2550282 1 - 202621043 g i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140040 1 - 190779 g i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 94577 1 - 106623 g i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192435939 1 - 192460366 g i macFas5.chr2 C 0 I 1142 s saiBol1.JH378146 17303134 1 - 17725628 g i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 32509 1 + 69927 g i aotNan1.NW_018503669v1 I 9987 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175960 1045 - 19675229 I e calJac3.chr17 73862344 4660 + 74750902 I e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7388133 992 - 7796314 I e manLeu1.NW_012102020v1 1451341 926 + 1977891 I e chlSab2.chr15 91379809 1966 + 91754291 I e cerAty1.NW_012004056v1 16411998 923 - 16847902 I e rheMac8.chr2 2370065 1122 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=375.000000 s hg38.chr3_KI270934v1_alt 78048 1 + 163458 g s panTro5.chr3 2550283 1 - 202621043 g i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140041 1 - 190779 g i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 94578 1 - 106623 c i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 17303135 1 - 17725628 g i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 32510 1 + 69927 g i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175960 1045 - 19675229 I e calJac3.chr17 73862344 4660 + 74750902 I e cebCap1.NW_016107444v1 6394309 2670 + 6778120 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7388133 992 - 7796314 I e manLeu1.NW_012102020v1 1451341 926 + 1977891 I e chlSab2.chr15 91379809 1966 + 91754291 I e cerAty1.NW_012004056v1 16411998 923 - 16847902 I e macFas5.chr2 192435940 1142 - 192460366 I e rheMac8.chr2 2370065 1122 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=192145.000000 s hg38.chr3_KI270934v1_alt 78049 109 + 163458 gtttcaccatgttggccaagttggtctcgaactcctgacctcatgtgatccgcccacctcagcttcccaaagtgctgggattacaggcgtaagccatcgtgcctggccA s panTro5.chr3 2550284 109 - 202621043 gtttcaccatgttggccaagttggtctcgaactcctgacctcatgtgatccgcccacctcagcctcccaaagtgctgggattacaggtgtaagccatcgtgcctagccA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140042 109 - 190779 gtttcaccatgttggccaagttggtcttgaactcctgacctcatgtgatccgcccacctcagcctcccaaagtgctgggattacaggtgtaagtcatcgtgcctagccA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 94579 109 - 106623 gttttaccatgttggccaggttggtctcgaactcctgacctcatgtgatccgcccacctcagcctcccaaagtgctgggattacaggtgtaagccatcgtgcccggccA i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 17303136 109 - 17725628 gtttcaccatgttggccaggctggtctcgaactcctggcctcaagtgatccacccacctcggcctcccaaagtgctgggattacaggcgtgagccaccgcacctggcTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6396979 109 + 6778120 gtttcaccatgttggccaggctggtctcgaactcctggcctcaagtgatccacccaccttggcctcccaaagtgctgggattacaggcgtaagccactgcgcctggccA i cebCap1.NW_016107444v1 I 2670 C 0 s aotNan1.NW_018503669v1 32511 109 + 69927 gtttcaccatgtcggccagcctggtctcgaactcctggcctcaagtgatccacccaccttggcctcccaaagtgctgggattacaggcataagccaccgtacctggccA i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175960 1045 - 19675229 I e calJac3.chr17 73862344 4660 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7388133 992 - 7796314 I e manLeu1.NW_012102020v1 1451341 926 + 1977891 I e chlSab2.chr15 91379809 1966 + 91754291 I e cerAty1.NW_012004056v1 16411998 923 - 16847902 I e macFas5.chr2 192435940 1142 - 192460366 I e rheMac8.chr2 2370065 1122 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=2800.000000 s hg38.chr3_KI270934v1_alt 78158 1 + 163458 G s panTro5.chr3 2550393 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140151 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 94688 1 - 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 17303245 1 - 17725628 G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6397088 1 + 6778120 G i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 32620 1 + 69927 G i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 2335100 1 - 31377067 G i canFam3.chr33 I 5697 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e micMur3.chr1 88397661 4970 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175960 1045 - 19675229 I e calJac3.chr17 73862344 4660 + 74750902 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7388133 992 - 7796314 I e manLeu1.NW_012102020v1 1451341 926 + 1977891 I e chlSab2.chr15 91379809 1966 + 91754291 I e cerAty1.NW_012004056v1 16411998 923 - 16847902 I e macFas5.chr2 192435940 1142 - 192460366 I e rheMac8.chr2 2370065 1122 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=31384.000000 s hg38.chr3_KI270934v1_alt 78159 10 + 163458 TTTTCACTTT s panTro5.chr3 2550394 10 - 202621043 TTTTCACTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140152 10 - 190779 TTTTCACTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 94689 10 - 106623 TTTTCACTTT i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 17303246 10 - 17725628 TTTTCACTTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6397089 10 + 6778120 TTTTCACTTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 32621 10 + 69927 TTTTCACTTT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88402631 10 + 114275543 TTTTCACTTT i micMur3.chr1 I 4970 C 0 s canFam3.chr33 2335101 10 - 31377067 TTTCTACTTT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e mm10.chr16 32797625 4922 + 98207768 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175960 1045 - 19675229 I e calJac3.chr17 73862344 4660 + 74750902 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7388133 992 - 7796314 I e manLeu1.NW_012102020v1 1451341 926 + 1977891 I e chlSab2.chr15 91379809 1966 + 91754291 I e cerAty1.NW_012004056v1 16411998 923 - 16847902 I e macFas5.chr2 192435940 1142 - 192460366 I e rheMac8.chr2 2370065 1122 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=75979.000000 s hg38.chr3_KI270934v1_alt 78169 33 + 163458 AAAATGATCTCTAATACCAACTCTTGGGGTCC-A s panTro5.chr3 2550404 33 - 202621043 AAAATGATCTCTAATACCAACTCTTGGGGTCC-G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140162 33 - 190779 AAAATGATCTCTAATACCAACTCTTGGGGTCC-A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 94699 34 - 106623 AAAATGATCTTTAATACCAACTCTTGGGGTCCTG i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 17303256 32 - 17725628 AAAATGATCTTTAATACCAACTCTT-GGGTCT-G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6397099 32 + 6778120 AAAATGATCTTTAATACCAACTCTT-GGGTCT-G i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 32631 32 + 69927 AAAATGATCTTTAATACCAACTCTT-GGGTCC-G i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88402641 32 + 114275543 AAAATAATTTTT-ATACCAACTCTGGGGGTCT-T i micMur3.chr1 C 0 C 0 s mm10.chr16 32802547 33 + 98207768 AAAGAAACTCTTCATGCCAGCTGACAGGGTTC-T i mm10.chr16 I 4922 C 0 s canFam3.chr33 2335111 30 - 31377067 -AAAATATCTTT-ATACCAACTCTG-AGGTCC-G i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14803007 3784 - 22200726 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175960 1045 - 19675229 I e calJac3.chr17 73862344 4660 + 74750902 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7388133 992 - 7796314 I e manLeu1.NW_012102020v1 1451341 926 + 1977891 I e chlSab2.chr15 91379809 1966 + 91754291 I e cerAty1.NW_012004056v1 16411998 923 - 16847902 I e macFas5.chr2 192435940 1142 - 192460366 I e rheMac8.chr2 2370065 1122 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=175781.000000 s hg38.chr3_KI270934v1_alt 78202 47 + 163458 AATGGGTCCCCACTGGTTTCAAATGTTGAGCATGCACAGATTATGTG s panTro5.chr3 2550437 47 - 202621043 AATGGGTCCCCACTGGTTTCAAATGTTAAGCATGCACAGATTATGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140195 47 - 190779 AATGGGTCCCCACTGGTTTCAAATGTTAAGCATGCACAGATTATGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 94733 47 - 106623 AATGGGTCCCCACTGGTTTCAAATGTTGAGCATGCACAGATTATGTG i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 17303288 47 - 17725628 AATGGGCCCCCACTCGTTTCAAATGTTGAGCATGCACAGATTATGTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6397131 47 + 6778120 AATGGGCCCCCACTGGTTTCAAATGTTGAGCATGCACAGATTATGTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 32663 47 + 69927 AATGGGCCCCCACTGGTTTCAAATGTTGAGCATGCACAGATTATGTG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88402673 47 + 114275543 AATGGGTCCCCACAGGTTTCAAATGCTGAGCATGTACAGGTCGTGTG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14806791 47 - 22200726 aATGGGTCCCCACAGGTTTCAAATGCTGAGCACGCACAGGTCGTGTG i proCoq1.NW_012133858v1 I 3784 C 0 s mm10.chr16 32802580 47 + 98207768 GAGAGGATTCCACAAGTTCTGCATGTTGTGTGAGCACAGACAGTGTG i mm10.chr16 C 0 I 218 s canFam3.chr33 2335141 47 - 31377067 AACATGGCCCTACAAGTTCAAAATGTTGAGTATGCGCAGATGGTTTA i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175960 1045 - 19675229 I e calJac3.chr17 73862344 4660 + 74750902 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7388133 992 - 7796314 I e manLeu1.NW_012102020v1 1451341 926 + 1977891 I e chlSab2.chr15 91379809 1966 + 91754291 I e cerAty1.NW_012004056v1 16411998 923 - 16847902 I e macFas5.chr2 192435940 1142 - 192460366 I e rheMac8.chr2 2370065 1122 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=26856.000000 s hg38.chr3_KI270934v1_alt 78249 7 + 163458 GATGAGA s panTro5.chr3 2550484 7 - 202621043 GATGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140242 7 - 190779 GATGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 94780 7 - 106623 GATGAGA i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 17303335 7 - 17725628 GATGAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6397178 7 + 6778120 GATGAGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 32710 7 + 69927 GATGAGA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88402720 7 + 114275543 GATGAGA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14806838 7 - 22200726 GCTGAGA i proCoq1.NW_012133858v1 C 0 I 1492 s canFam3.chr33 2335188 7 - 31377067 AATGAGA i canFam3.chr33 C 0 I 1 e mm10.chr16 32802627 218 + 98207768 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175960 1045 - 19675229 I e calJac3.chr17 73862344 4660 + 74750902 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7388133 992 - 7796314 I e manLeu1.NW_012102020v1 1451341 926 + 1977891 I e chlSab2.chr15 91379809 1966 + 91754291 I e cerAty1.NW_012004056v1 16411998 923 - 16847902 I e macFas5.chr2 192435940 1142 - 192460366 I e rheMac8.chr2 2370065 1122 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=39650.000000 s hg38.chr3_KI270934v1_alt 78256 19 + 163458 ACTTGCCAGGTGGGCTTAC s panTro5.chr3 2550491 19 - 202621043 ACTTGCCAGGCGGGCTTAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140249 19 - 190779 ACTTGCCAGGTGGGCTTAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 94787 19 - 106623 ACTTGCCAGGCAGGCTTAC i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 17303342 19 - 17725628 ACTGGCCAGGCGGGATTAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6397185 19 + 6778120 ACTGGCCAGGCGGGATTAC i cebCap1.NW_016107444v1 C 0 I 483 s aotNan1.NW_018503669v1 32717 19 + 69927 ACTGGCCAGGCCGGATTAC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88402727 19 + 114275543 CCCCGCCAGGCAGGGTTAC i micMur3.chr1 C 0 C 0 s canFam3.chr33 2335196 19 - 31377067 GGTTTACATGCAGGGTCAC i canFam3.chr33 I 1 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32802627 218 + 98207768 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175960 1045 - 19675229 I e calJac3.chr17 73862344 4660 + 74750902 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7388133 992 - 7796314 I e manLeu1.NW_012102020v1 1451341 926 + 1977891 I e chlSab2.chr15 91379809 1966 + 91754291 I e cerAty1.NW_012004056v1 16411998 923 - 16847902 I e macFas5.chr2 192435940 1142 - 192460366 I e rheMac8.chr2 2370065 1122 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=22489.000000 s hg38.chr3_KI270934v1_alt 78275 15 + 163458 CGAAGGAGACGTGGT s panTro5.chr3 2550510 15 - 202621043 CGAAGGAGACGTGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140268 15 - 190779 CGAAGGAGACGTGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 94806 15 - 106623 CGAAGGAGACGTGGT i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 17303361 15 - 17725628 AGACGCTGACTTGGT i saiBol1.JH378146 C 0 I 474 s aotNan1.NW_018503669v1 32736 15 + 69927 AGACACAGACGTGGT i aotNan1.NW_018503669v1 C 0 I 347 s micMur3.chr1 88402746 15 + 114275543 TGAAGGAGAGGTGGT i micMur3.chr1 C 0 I 1634 s canFam3.chr33 2335215 15 - 31377067 CACAGAAGAGGTGGT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32802627 218 + 98207768 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175960 1045 - 19675229 I e calJac3.chr17 73862344 4660 + 74750902 I e cebCap1.NW_016107444v1 6397204 483 + 6778120 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7388133 992 - 7796314 I e manLeu1.NW_012102020v1 1451341 926 + 1977891 I e chlSab2.chr15 91379809 1966 + 91754291 I e cerAty1.NW_012004056v1 16411998 923 - 16847902 I e macFas5.chr2 192435940 1142 - 192460366 I e rheMac8.chr2 2370065 1122 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=75114.000000 s hg38.chr3_KI270934v1_alt 78290 27 + 163458 AAGAATCGCCTACATTTGCCAGGCCCT s panTro5.chr3 2550525 27 - 202621043 AAGAATCGCCTACATTTGCCAGGCCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140283 27 - 190779 AAGAATCGCCTACATTTGCCAGGCCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 94821 27 - 106623 AAGAATCGCCTACATTTGCCAGGCCCT i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 73867004 27 + 74750902 aagaaTCACCTAAATTTGCAAGGCCCC i calJac3.chr17 I 4660 C 0 s saiBol1.JH378146 17303850 27 - 17725628 aagaaTCACCTAAATTTGCAAGGCCCT i saiBol1.JH378146 I 474 C 0 s cebCap1.NW_016107444v1 6397687 27 + 6778120 aagaaTCACCTAATTTTGCAAGGCCCT i cebCap1.NW_016107444v1 I 483 C 0 s aotNan1.NW_018503669v1 33098 27 + 69927 aagaaTCACCTAAATTTGCAAGGCCCT i aotNan1.NW_018503669v1 I 347 C 0 s canFam3.chr33 2335230 27 - 31377067 GAGAATCATCTAAATTTGCAAGGACCT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32802627 218 + 98207768 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175960 1045 - 19675229 I e otoGar3.GL873829 216298 5846 + 608964 I e colAng1.NW_012118932v1 7388133 992 - 7796314 I e manLeu1.NW_012102020v1 1451341 926 + 1977891 I e chlSab2.chr15 91379809 1966 + 91754291 I e cerAty1.NW_012004056v1 16411998 923 - 16847902 I e macFas5.chr2 192435940 1142 - 192460366 I e rheMac8.chr2 2370065 1122 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=324803.000000 s hg38.chr3_KI270934v1_alt 78317 127 + 163458 GAGGACAGGCCCTCTCCACACCGAGGCTTATTTCCTTGGGTTGCAGAAGAGGAAACGCCAGGGAGCCCAGTATTCTTTGGTTCATTCACTTCttttttatgttgtaacct--acatactgtaaactacg s panTro5.chr3 2550552 127 - 202621043 CAGGACAGGCCCTCTCCACACCGAGGCTTATTTCCTTGGGTTGCAGAAGAGGAAACGCCAGGGAGCCCAGTATTCTTTGGTTCATTCGCTTCttttttatggtgtaacct--acatactgtaaactacg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140310 127 - 190779 GAGGACAGGCCCTCTCCACACCGAGGCTTATTTCCTTGGGTTGCAGAAGAGGAAACGCCAGGGAGCCCAGTATTCTTTGGTTCATTCGCTTCttttttatggtgtaacct--acatactgtaaactacg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 94848 129 - 106623 GAGGACAGGCCCTCTCCACACCGAGGCTTATTTCCTTGGGTTGCAGAAGAGGAAACGCCAGGGAGCCCAGTATTCTTTGGTTCATTCACTTCttttttatggtgtaaccttaccatactgtaaattatg i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 73867031 127 + 74750902 GAGAGCAGGTGCTCTCCACACCGAGGCTTATTTCCTCCGGTTGCAGAAGAGGAAGCACCAGGGAGCCCAGTATTCTTTGGCTCACTCACttctttcattatgtgtaacct--acatagtataaactatg i calJac3.chr17 C 0 I 1086 s saiBol1.JH378146 17303877 103 - 17725628 GATGACAGGTGCTCTCCACACCGAGGCTCATTTCCATGGGTTGCAGAAGAGGAAGC------------------------TTCACTCACTTCTTGTGTTGTgtgtaaccc--acatgctataaaccatg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6397714 123 + 6778120 GAGAACAGGTGCTCTCCACTCCAAGGCTTATTTCCTTGGGTTGCAGAAGAGGAAGCACCAGGGAGCCCAGTATTCTTTGGTTCACTC----Cttttattgcgtgtgacct--acataccatgaactgtg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 33125 127 + 69927 GAGAACAGGTGCTCTTCACACCAAGGCTTATTTCCTTGGGTTGCAGAAGAGGAAGCGCCAGGgagcccagtattctttggttcactcacttcttttattatgtgtaacct--acacactgtgaagtatg i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 222144 126 + 608964 gaaaataggcCTTGCCCACACCAACACTTATTTCCTTGGGTTGCAGAATAGGAAATTCCAGGGAACCCTCTATTCTCTTGTCCAGTCACtttttat-tacagtgtaacct--atgtgcaataaacgata i otoGar3.GL873829 I 5846 C 0 s canFam3.chr33 2335257 127 - 31377067 GAGAATGGGCCTTCCCCAATCCTAACCCGTAGTCCTTGGGCTATAGTGTAGGAAACTCCAGGGAGCCCTCTGTCCATTCGTTCATTCAtctctttactagggcataaccc--acacactgcaaactaca i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32802627 218 + 98207768 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175960 1045 - 19675229 I e colAng1.NW_012118932v1 7388133 992 - 7796314 I e manLeu1.NW_012102020v1 1451341 926 + 1977891 I e chlSab2.chr15 91379809 1966 + 91754291 I e cerAty1.NW_012004056v1 16411998 923 - 16847902 I e macFas5.chr2 192435940 1142 - 192460366 I e rheMac8.chr2 2370065 1122 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=288945.000000 s hg38.chr3_KI270934v1_alt 78444 232 + 163458 cccagcttaagtagcgtataccctgatgaatttttatgtacgta-----tgtatccccaggat-gtatccgacactcaggtcaagatacagaacgtgctcagcacctcaacaggtgcccttgtgttcccttccagtcaagccc----------------------cca-------cttgccaccACAGAATG---------------GAAC-------------AATCAttttttttta----ttttttattttttattttttttttttttttagagacaggg------tctcgctctgtc-tcca s panTro5.chr3 2550679 206 - 202621043 cccagcttaagtagctcataccctgatgaatttttatgtacgta-----tgtatccccaggat-gtatccgacactcaggtcaagatacagaatgtgctcagcacctcagcaggtgcccttgtgttcccttccagtcaagccc----------------------cca-------cttgccaccACAGAATG---------------GAAC-------------AAtc------------------------------tttttttttttttttagagacaggg------tcttgctctgtc-tcca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140437 204 - 190779 cccagcttaagtagctcataccctgatgaatttttatgtacgta-----tgtatccccaggat-gtatccgacactcaggtcaagatacagaatgtgctcagcacctcagcaggtgcccttgtgttcccttccagtcaagccc----------------------cca-------cttgccaccACAGAATG---------------GAAC-------------AAtc--------------------------------tttttttttttttagagacaggg------tcttgctctgtc-tcca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 94977 206 - 106623 cccagcttaagtagcgtataccctgatgaatttttacgtactta-----tgtatccccaggatggtatctgacactcaggtcaagatacagaatgtgctcagcacctcaacaggtgcccttgtgttcccttccagtcaagccc----------------------ccg-------cttgccgccACAGAATG---------------GAAC-------------AATC------------------------------Atttttttgtttttcagagacaggg------tctcgctctgtc-tcc- i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 17303980 207 - 17725628 tccctctgaagtagcgtatagcctcatgaatgttttcatctgtaatgtgtagatgcccaggat-gtatccgacactcaggtcaggatttagaatgtgctcagcgcctcaacggtt-ccctcgcgttcccttccagtcaGG-CC----------------------CCA-------CTTGCTGCTACAGAACG---------------GAAC-------------AATC--------------------------------Atttttggtttttagagaaaggg------tctggctctgtg-tccg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6397837 206 + 6778120 tccatctgaagtagcatgtagcctgatgaat-ttttcgtatgtaatgtgtatatgcccaggat-gtacctgacactcaggtcaagattcagaatgtgctcagcgcctcaacagtt-cccttgtgttcccttccagtcaGG-CC----------------------CCA-------CTTGCTGCCACAGAACG---------------GAAC-------------AATC--------------------------------ATTCTTGGtttttagagaaaggg------tctggctctgtc-tctg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 33252 211 + 69927 tctgtcttaagtagcgtgtagcctgatgagtgtttacgtatgtaatgtgtatacgcccagcgt-gtatccgacactcaagtcaggactcagaatgtgctcagcgcctcgaagat---ccctgtgctccctcccagtcagg-cc----------------------cca-------cctgctgccacagaaca---------------taac-------------aatc--------------------------------attCCTGGtttttagagaaagggtctggttctggctctggc-tccg i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 222270 291 + 608964 gcaatcttaagtagtgtacagcttgatgaatttttacatacgta-------tatactcaggac-atatctgccacccgcgtgaagatacagaacattgccagagcctcaataggctcccttgtgttaccctccagtcggacccacctactaaccagatgtaaccaccattcttatctcgtcaccatagattagttctgcttatttttgaacttcatataattagaatcatgcatatatactccttttttttcctttctttttttttttttttttgagacagag------attctccttgttgtcc- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2335384 137 - 31377067 tcaatcctaagtagcctacaacttaatgaatttttacacgtgaa-------tatacccaggag-ctagccaccactcag----agatagaagacactttccgtatctcaataggctccctcctattccc-tccagtcattctc----------------------tcc-------ccca------------------------------------------------------------------------------------------------------------------------------- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32802627 218 + 98207768 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175960 1045 - 19675229 I e calJac3.chr17 73867158 1086 + 74750902 I e colAng1.NW_012118932v1 7388133 992 - 7796314 I e manLeu1.NW_012102020v1 1451341 926 + 1977891 I e chlSab2.chr15 91379809 1966 + 91754291 I e cerAty1.NW_012004056v1 16411998 923 - 16847902 I e macFas5.chr2 192435940 1142 - 192460366 I e rheMac8.chr2 2370065 1122 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=30396.000000 s hg38.chr3_KI270934v1_alt 78676 16 + 163458 aagctggagtgcagct s panTro5.chr3 2550885 16 - 202621043 aagctggagtgcagct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140641 16 - 190779 aagctggagtgcagct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 95183 16 - 106623 aagctggagtgcagct i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192437082 16 - 192460366 aagctggagtgcagtg i macFas5.chr2 I 1142 I 3 s saiBol1.JH378146 17304187 16 - 17725628 aagctggagtgcagtg i saiBol1.JH378146 C 0 I 7 s cebCap1.NW_016107444v1 6398043 10 + 6778120 aagctggagt------ i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 33463 16 + 69927 aagctggagtgcagtg i aotNan1.NW_018503669v1 C 0 I 7 s otoGar3.GL873829 222561 16 + 608964 caggtagagtgcagtg i otoGar3.GL873829 C 0 I 3 s canFam3.chr33 2335521 3 - 31377067 aaa------------- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32802627 218 + 98207768 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175960 1045 - 19675229 I e calJac3.chr17 73867158 1086 + 74750902 I e colAng1.NW_012118932v1 7388133 992 - 7796314 I e manLeu1.NW_012102020v1 1451341 926 + 1977891 I e chlSab2.chr15 91379809 1966 + 91754291 I e cerAty1.NW_012004056v1 16411998 923 - 16847902 I e rheMac8.chr2 2370065 1122 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=9084.000000 s hg38.chr3_KI270934v1_alt 78692 3 + 163458 cca s panTro5.chr3 2550901 3 - 202621043 cca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140657 3 - 190779 cca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 95199 3 - 106623 cca i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192437101 3 - 192460366 ccg i macFas5.chr2 I 3 C 0 s cerAty1.NW_012004056v1 16412921 3 - 16847902 cca i cerAty1.NW_012004056v1 I 923 C 0 s colAng1.NW_012118932v1 7389125 3 - 7796314 cca i colAng1.NW_012118932v1 I 992 C 0 s saiBol1.JH378146 17304210 3 - 17725628 cca i saiBol1.JH378146 I 7 C 0 s aotNan1.NW_018503669v1 33486 3 + 69927 ccc i aotNan1.NW_018503669v1 I 7 C 0 s otoGar3.GL873829 222580 3 + 608964 tca i otoGar3.GL873829 I 3 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32802627 218 + 98207768 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19175960 1045 - 19675229 I e calJac3.chr17 73867158 1086 + 74750902 I e cebCap1.NW_016107444v1 6398053 0 + 6778120 C e canFam3.chr33 2335524 0 - 31377067 C e manLeu1.NW_012102020v1 1451341 926 + 1977891 I e chlSab2.chr15 91379809 1966 + 91754291 I e rheMac8.chr2 2370065 1122 - 204787373 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=413777.000000 s hg38.chr3_KI270934v1_alt 78695 55 + 163458 tcatggttcactgcagcctccgcctcctgggttt-gagcgatcctcccatttcagT s panTro5.chr3 2550904 55 - 202621043 tcatgcttcactgcagcctccgcctcccgggttt-gagcgatcctcccatttcagT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140660 55 - 190779 tcatggttcactgcagcctccgcctcccgggttt-gagcgatcctcccatttcagT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 95202 53 - 106623 tcatggttca-tgcagcct-cgcctcccgggtttggagcgatcct-ccATTTCAGT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2371187 55 - 204787373 tcatggttcactgcagcctccgcctcccgggttc-gagcgatcctcccatttcaCT i rheMac8.chr2 I 1122 C 0 s macFas5.chr2 192437104 55 - 192460366 tcatggttcactgcagcctccgcctcccgggttc-gagcgatcctcccatttcaCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19177005 55 - 19675229 tcatggttcactgcagcctccgcctcccgggttc-gagcgatcctcccatttcaCT i macNem1.NW_012014355v1 I 1045 C 0 s cerAty1.NW_012004056v1 16412924 55 - 16847902 tcatggttcactgcagcctccgcctcccgggttc-gaacgatcctcccatttcagT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91381775 55 + 91754291 tcacggttcactgcagcctccgcctcccgggttc-gagcgatcctcccatttcagT i chlSab2.chr15 I 1966 C 0 s manLeu1.NW_012102020v1 1452267 55 + 1977891 tcatggctcactgcagcctccacctcccgggttc-gagcgatcctcccatttcagT i manLeu1.NW_012102020v1 I 926 C 0 s colAng1.NW_012118932v1 7389128 55 - 7796314 tcatggttcactgcagcctccgcctcccgggttc-gagcaatcctcccatttcagT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17304213 55 - 17725628 tcacggttcactgaggcctctgcctcccgagttc-gagcaaccctcccgtttcagT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6398053 51 + 6778120 ----ggttcactgcggcctctgcctcccgggttc-gagcaaaccccccacttcagg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 33489 54 + 69927 tcacggttcgctgcagcctctgcct-ccgggttc-gagcaaccctcccatttcggT i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 222583 55 + 608964 ttatagctcacagcaacctcaaacacctgggctc-aagagatcctcctgcctcagc i otoGar3.GL873829 C 0 I 156 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32802627 218 + 98207768 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e calJac3.chr17 73867158 1086 + 74750902 I e canFam3.chr33 2335524 0 - 31377067 C e nomLeu3.chr11 2859940 8064 - 123690457 I a score=142381.000000 s hg38.chr3_KI270934v1_alt 78750 17 + 163458 gtaaccaccattcttat s panTro5.chr3 2550959 17 - 202621043 gtaaccaccattcttat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140715 17 - 190779 gtaaccaccattcttat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 95255 17 - 106623 gtaaccaccattcttat i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2371242 17 - 204787373 gtaaccaccattcttat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192437159 17 - 192460366 gtaaccaccattcttat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19177060 17 - 19675229 gtaaccaccattcttat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16412979 17 - 16847902 gtaaccaccattcttac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91381830 17 + 91754291 gtaaccaccattcttat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1452322 17 + 1977891 gtaaccaccattcttac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7389183 17 - 7796314 gtaaccaccgttcttac i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17304268 17 - 17725628 gtaaccactgttcttac i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6398104 17 + 6778120 gtaaccaccattcttac i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 33543 17 + 69927 gtaaccaccattcttac i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 2335524 11 - 31377067 ------atcattcttgc i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32802627 218 + 98207768 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e calJac3.chr17 73867158 1086 + 74750902 I e otoGar3.GL873829 222638 156 + 608964 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=434016.000000 s hg38.chr3_KI270934v1_alt 78767 68 + 163458 ctc---tatcaccatagattagctctgcatgtctttgaacttcata-taaatggaatcatgcatagataggc s panTro5.chr3 2550976 68 - 202621043 ctc---tatcaccatagattagctctgcatgtctttgaacttcata-taaatggaatcatgcatagataggc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140732 68 - 190779 ctc---tatcaccatagattagctctgcatgtctttgaacttcata-taaatggaatcatgcatagataggc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 95272 69 - 106623 ctc---tatcaccatagattagctctgcatgtctttgaacttcatattaaatggaatcatgcatagataggc i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2371259 65 - 204787373 ct------tcaccatagattagctctgcctgtctttgagcttcatg-taaatggaatcatgcatatataggc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192437176 65 - 192460366 ct------tcaccatagattagctctgcctgtctttgagcttcatg-taaatggaatcatgcatatataggc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19177077 65 - 19675229 ct------tcaccatagattagctctgcctgtctttgagcttcatg-taaatggaatcatgcatatataggc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16412996 66 - 16847902 ct-----atcaccatagattagctctgcgtgtctttgaacttcatg-taaatggaatcatgcatatataggc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91381847 65 + 91754291 ct------tcaccatagattagctctgcctgtctttgagcttcatg-taaatggaatcatgcagatataggc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1452339 66 + 1977891 ct-----atcaccatagattagctctgcctgtctttgaacttcatg-taaatggaatcatgcatatataggc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7389200 65 - 7796314 ct------tcaccatagattagctctgcctgtctttgaacttcatg-taaatggaatcatgcagatataggc i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17304285 68 - 17725628 ctc---tatcaccacagatgagttctgcctgtctctgaatttcatg-taaacggaatcgtgcacttatatgc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6398121 68 + 6778120 ctc---tgtcgccgcagatgagctctgcctgtctttgaatttcata-taaatggaatcatgtgtatatatgc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 33560 66 + 69927 ctct-atatcgccacagatgagtt----ctgtctctgaatttcaga-taaatggagtcatgcatatatatgc i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32802845 52 + 98207768 ---Ctctgccaccatggacacattc------------aggactatg-tgaataggattgtgcgtgcgc---- i mm10.chr16 I 218 C 0 s canFam3.chr33 2335535 66 - 31377067 ---ctctatcaccatgggttagttctgcctatttctgaacttcata-taaatggaattaggattccatac-- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e calJac3.chr17 73867158 1086 + 74750902 I e otoGar3.GL873829 222638 156 + 608964 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=234517.000000 s hg38.chr3_KI270934v1_alt 78835 27 + 163458 tcttttgtgtctggattctctctgtta s panTro5.chr3 2551044 27 - 202621043 tcttttgtgtctggattctctctgtta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140800 27 - 190779 tcttttgtgtctggattctctctgtta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 95341 27 - 106623 tcttttgtgtctggattctctctgttt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2371324 27 - 204787373 tcttttgtgtctggattctctctgtta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192437241 27 - 192460366 tcttttgtgtctggattctctctgtta i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19177142 27 - 19675229 tcttttgtgtctggattctctctgtta i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16413062 27 - 16847902 tcttttgtgtctggattctctctgtta i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91381912 27 + 91754291 tcttttgtgtctggattctctctgtta i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1452405 27 + 1977891 tcttttgtgtctggattctctctgtta i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7389265 27 - 7796314 tcttttgtgtctggattctctctgtta i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17304353 25 - 17725628 tcttttgtgtctggat--tctttgttg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6398189 25 + 6778120 tcttttgtgtctgcat--tctttgttg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 33626 24 + 69927 tcttttgtg-caggat--tctttgttg i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 222794 27 + 608964 tcttttgtacctggcttctttctcttc i otoGar3.GL873829 I 156 C 0 s mm10.chr16 32802897 27 + 98207768 ttttcagtatttggcttcttacatgta i mm10.chr16 C 0 C 0 s canFam3.chr33 2335601 27 - 31377067 tctttcgtgtctggcttctttttctta i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e calJac3.chr17 73867158 1086 + 74750902 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=1084479.000000 s hg38.chr3_KI270934v1_alt 78862 134 + 163458 acactgtgtctgtgagactcactcac-gctgt---gtgt-agt-attatgcttcatccttttttgttgttgcatagtattccactg------tataaa-tataccacaatttatttgtctg-ttttccaattgctgtgcatttggatt s panTro5.chr3 2551071 134 - 202621043 acactgtgtctgtgagactcactcac-gctgt---gtgt-agt-attatgcttcatccttttttgttgtcgcatagtattccactg------tataaa-tataccacaatttatttgtctg-ttttccaattgctgtgcatttggatt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140827 134 - 190779 acactgtgtctgtgagactcactcac-gctgt---gtgt-agt-attatgcttcatccttttttgttgtcgcatagtattccactg------tataaa-tataccacaatttatttgtctg-ttttccaattgctgtgcatttggatt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 95368 134 - 106623 acactgtgtctgtgagactcactcat-gctgt---gtgt-agt-attatgcttcatccttttttgttgttgcatagtatt-cactg------tataaa-tataccacaatttatttgtccgtttttccaattgctgggcatttggatt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2371351 133 - 204787373 acactgtgtctgtgagactcactcac-gctgt---gtgt-agt-gttatacttcatcc-tttttgttgttgcacagtattccattg------tataaa-tataccacaatttatttaccca-ttttccaattgctgggcatttggatt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192437268 133 - 192460366 acactgtgtctgtgagactcactcac-gctgt---gtgt-agt-gttatacttcatcc-tttttgttgttgcacagtattccattg------tataaa-tataccacaatttatttaccca-ttttccaattgctgggcatttggatt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19177169 133 - 19675229 acactgtgtctgtgagactcactcac-gctgt---gtgt-agt-gttatacttcatcc-tttttgttgttgcacagtattccattg------tataaa-tataccacaatttatttaccca-ttttccaattgctgggcatttggatt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16413089 133 - 16847902 acactgtgtctgtgagactcactcac-gctgt---gtgt-agt-gttatacttcatcc-tttttgttgttgcacagtatttcattg------tataaa-tataccacaatttatttaccca-ttttccatttgctgggcatttggatt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91381939 129 + 91754291 acactgtgtctgtgagactcactcac-actgt---gtgt-ggt-gttatacttcatcc-tttttgttgttgcacagtattccattg------tataaa-tataccacaatttat----cca-ttttgcaattgctgggcatttggatt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1452432 133 + 1977891 acactgtgtctgtgagactcactcac-gctgt---gtgt-agt-gttatacttcatcc-tttttgttgttgcacagtatttcattg------tataaa-tataccacaatttatttaccca-ttttccaattgctgggcatttggatt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7389292 122 - 7796314 acactg----tgtgagactcactcac-ac--t---gtgt-agt-attatacttcatcc-tttttgctgttgcatagcattccattg------tataaa-tataccacaatttatttatcca-ttttccaattgctgggcat-----tt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73868244 131 + 74750902 acattgtatct-----attgaaacatcatgat---gtTTAAGT-ATTTtacttcatctgtttttgtctttgggtagtattccattg------cataaa-tgtaacacaatttatttgtcca-ttttcctattgctgggcatttggatt i calJac3.chr17 I 1086 C 0 s saiBol1.JH378146 17304378 135 - 17725628 acactatgtctgccagactcagccat-gtgct---gttgaact-attttacttcatccgtttttgttgttgggtagtgttccgttg------cataaa-tataacacgatttatttctcca-ttttcctattgctgggcatttggatt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6398214 131 + 6778120 acactatgtga----gactcagccat-gtgct---gtggaagt-gttttacttcatccgtttttgttgttgggtagtattccactg------cataaa-tataacacaatttatttgtcca-ttttcctcttgctgggcatttagatt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 33650 135 + 69927 acactgcgtctgtgagactcagccac-gtgct---gtttaagt-attttacttcatctgtttttgtcgttgggtcatattccattg------cataaa-cgtaacacaatttatttgtcca-tgttcctattgctgggcatttggatt i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 222821 113 + 608964 acattatgtctgtgagacagacccat-gt--t---gtca--------------catgc-------------gacagtatgtcattgtttaaatataaa-gataccacaagttatttgtcca-ttttactattgatgggctttcaggct i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32802924 135 + 98207768 acattctgtctgtgaggttcaccaga-gctcttacgtat-aataataatgctttatcc---ttagatggcgggtggttttcctttg------gaatta-tcaaccacaacttctgtggcca-ttttcttattgatggatgtttgggtt i mm10.chr16 C 0 I 43 s canFam3.chr33 2335628 130 - 31377067 acattatgcctgtgaaactcccctgt-gttgt---gtgt-agc-a--gtactccattcttgtttgctgttagatactattccattg------tagaaagtat---acaatttatttctcca-tgttcctattgatggacacttgtatc i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=676175.000000 s hg38.chr3_KI270934v1_alt 78996 65 + 163458 gtttt--g--tttttcactattttgaataaagctgctatgaacatccttgtatatgtcttGGGTATAca s panTro5.chr3 2551205 65 - 202621043 gtttt--g--tttttcactattttgaataaagctgctatgaacatccttgtatatgtcttGGGTATAca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140961 65 - 190779 gtttt--g--tttttcactattttggataaagctgctatgaacatccttgtatatgtcttGGGTATAca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 95502 64 - 106623 gttta--g--tttttcactattttggaataaactgctatgaa-atccttgtatatgtcttGGGTATAca i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2371484 65 - 204787373 gtttt--g--tttttcactattttgaataaagctgctatgaacattcttgtatatgtcttGGGTATAca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192437401 65 - 192460366 gtttt--g--tttttcactattttgaataaagctgctatgaacattcttgtatatgtcttGGGTATACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19177302 65 - 19675229 gtttt--g--tttttcactattttgaataaagctgctatgaacattcttgtatatgtcttGGGTATAca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16413222 64 - 16847902 gtttt--g--tttttcactattttgaataaagctgctatgaacattcttgtatatgtcttGGGTATAT- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91382068 65 + 91754291 gtttt--g--tctttcactattttgaataaagctgctatggacattcttatatatgtcttGGGTATACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1452565 65 + 1977891 gtttt--g--tttttcactattttgaataaagctgctatgaacattcttgtatatgtcttGGGTATAca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7389414 65 - 7796314 gtttt--g--tttttcactattttgaataaagctgctatgaacattcttgtatatgtcttGGGTATAca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73868375 65 + 74750902 atttt--g--gttttcactattttgaataaagctgctatgaacgttcttgcatgtatcttggGTGTAca i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17304513 64 - 17725628 atttt--g--tttttcacta-tttgaataaagctgctatgaacattcttgcttatgtcttGGGTATAca i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6398345 65 + 6778120 atttt--g--tttttcactattttaaataaagctgctatgaacattcttgtttatgtcttgggtataca i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 33785 65 + 69927 atttt--g--tttttcactattttgaataaagctgctatgaacattctggtatacttcttGGGTATAca i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 222934 67 + 608964 gtttc--tacttgttcactattttgaataaagctgctgtgaacattcttgtatgtgtcttgggtataca i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2335758 67 - 31377067 atttccag--tttttcactattcgaaagaaagctgctaggaatagtctcgcatacgctttgggtataca i canFam3.chr33 C 0 I 2307 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803059 43 + 98207768 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=203005.000000 s hg38.chr3_KI270934v1_alt 79061 26 + 163458 gatggtcctggcttacaatgattgga s panTro5.chr3 2551270 26 - 202621043 gatggtcccggcttacaatgattgga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141026 26 - 190779 gatggtcccggcttacaatgattgga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 95566 26 - 106623 gatggtcccggcttacaatgattgga i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2371549 26 - 204787373 gacggtcccggtttacaatgatttga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192437466 26 - 192460366 GACGGTCCCGGTTTACAATGATTTGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19177367 26 - 19675229 gacggtcccggtttacaatgatttga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16413286 25 - 16847902 -ATgtcttcggtttacaatgatttga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91382133 26 + 91754291 GACGGTCCCGGTTTACAATGATTTGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1452630 26 + 1977891 gacggtcccggtttacaatgatttga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7389479 26 - 7796314 gatggtcccagtttacaatgatttga i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73868440 26 + 74750902 gatggtcccaacttacaatgatttga i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17304577 26 - 17725628 gatggtcccaatttacagtgatttga i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6398410 21 + 6778120 gatgGTCCCAACTTACAGTGA----- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 33850 26 + 69927 gatggtcccaacgtacaattatttga i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 223001 20 + 608964 gatgGTCCCAAC------TGATTTGA i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803059 43 + 98207768 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e canFam3.chr33 2335825 2307 - 31377067 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=144184.000000 s hg38.chr3_KI270934v1_alt 79087 19 + 163458 tttaaaa-ttgtttgacttt s panTro5.chr3 2551296 19 - 202621043 tttaaaa-ttgtttgacttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141052 19 - 190779 tttaaaa-ttgtttgacttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 95592 18 - 106623 tttaaaa--tgtttgacttt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2371575 19 - 204787373 cttaaaa-ttttttgacttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192437492 19 - 192460366 CTTAAAA-TTTTTTGACTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19177393 19 - 19675229 cttaaaa-ttttttgacttc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16413311 19 - 16847902 cttaaaa-ttttttgacttt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91382159 19 + 91754291 CTTAAAA-TTTTTTGACTTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1452656 19 + 1977891 cttaaaa-ttttttgacttt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7389505 19 - 7796314 cttcaaa-ttttttgacttt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73868466 20 + 74750902 cttaaaatttttttgacttt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17304603 19 - 17725628 cttaaaa-ttttttgacttt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6398431 9 + 6778120 -----------TTTGACTTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 33876 19 + 69927 cttaaag-ttttttgacttt i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 223021 19 + 608964 CTTCTGA-TTTTTTGACTTT i otoGar3.GL873829 C 0 I 339 s mm10.chr16 32803102 13 + 98207768 CTTAAAG-TTGTTA------ i mm10.chr16 I 43 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e canFam3.chr33 2335825 2307 - 31377067 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=2264033.000000 s hg38.chr3_KI270934v1_alt 79106 287 + 163458 atgatggGCTTATCAGGgtattaaatgtgtttctgacttacagta-tttttgacttaccacgtgtttattgggacgtaaccccttcctaaga--------tgaagagcatctgTATACATCCAGAATcctgtggagcaactcataacccatgaggaatggaa---gccgacagacagactcatccccaggacagatggttctca-ctacatctcataaagcttcttagaagatcttacaggattgagcaaccagccagccacagcaggggccaactggataacacgtctttgcacaggct s panTro5.chr3 2551315 287 - 202621043 acgatgggcttatcagggtattaaatgtgtttctgacttacagta-tttttgacttaccacgtgtttattgggacgtaaacccttcctaaga--------tgaagaacatctgTATACATCCAGAATcctgtggagcaactcataacccatgaggaatggga---gccgacagacagactcatccccaggacaggtggttctca-ctacatctcagaaagcttcttagaagatcttacaggatcgtgcaaccagccagccacagcaggggccgactggataacatgtctttgcacaggct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141071 287 - 190779 acgatgggcttatcagggtattaaatgtgtttctgacttacagta-attttgacttaccacgtgtttattgggacgtaaacccttcctaaga--------tgaagaacatctgTATACATCCAGAATcctgtggagcaactcataacccatgaggaatggga---gccgacagacagactcatccccaggacaggtggttctca-ctacatctcataaagcttcttagaagatcttacaggatcgtgcaaccagccagccacagcaggggccgactggataacatgtctttgcacaggct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 95610 265 - 106623 atgatgggcttatcagggtattaaatgtgtttctgacttacagtattttttgacttaccacgtgtt--atgggacataaccccttcctaaga--------tgaggaacatctgTATACATCCAGAATCCTGTGGAGCAACTCATAACCCAT---------------------GACAGACTCAT-CCCAGGACAGATGGTTCTCA-CTACATCTCATAAAgctt-ttagaagatcttacaggatcacgcaaccagcca-ccacagcaggggccgactggataacacgtctttgcacaggct i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2371594 283 - 204787373 atgatgggcttatcagggtattaaatgtgtttctgacttacagta-tttttgacttaccaagtgtttattgggacgtaaccccttcctcaga--------tgaggaacatTCGTATATATCCAGAATCCTGTggagcaactcgtaacccatgaggactggga---gcc----gacagattcatccccaggacagatggttctca-atacatctcataaagcttcttagaagatcttacaggatcgcacaaccagtcagccacagcaggggccgactggataacacggctttgcacgggct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192437511 283 - 192460366 ATGATGGGCTTATCAGGgtattaaatgtgtttctgacttacagta-tttttgacttaccaagtgtttattgggacgtaaccccttcctcaga--------tgaggaacatTCGTATATATCCAGAATCCTGTGGAGCAACTCGTAACCCATGAGGACTGGGA---GCT----GACAGATTCATCCCCAGGACAGATGGTTCTCA-ATACATCTCATAAAgcttcttagaagatcttacaggatcgcacaaccagtcagccacagcaggggccgactggataacacggctttgcacgggct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19177412 283 - 19675229 atgatgggcttatcagggtattaaatgtgtttctgacttacagta-tttttgacttaccaagtgtttattgggacgtaaccccttcctcaga--------tgaggaacatTCGTATATATCCAGAATCCTGTggagcaactcgtaacccatgaggactggga---gcc----aacagattcatccccaggacagatggttctca-atacatctcataaagcttcttagaagatctcacaggatcgcacaaccagtcagccacagcaggggccgactggataacacggctttgcacgggct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16413330 287 - 16847902 atgatggGCTTATCAGGgtattaaatgtgtttctgacttacagta-tttttgacttaccaagtgtttattgggacgtaactccttcctcaga--------tgaggaacatctgTATATATCCAGAATcctgtggagcaagttgtaacccatgaggactggga---gccgacagacagattcatccccaggacagatggttctca-atacatctcataaagcttcttagaagatcttacaggatcgcacaaccagtcagccacagcaggggccgactggataacacggctttgcacaggct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91382178 283 + 91754291 ATGATGGGCTTATCAGGgtattaaatgtgtttctgacttacagta-tttttgacttaccaagtgtttattgggacgtaaccccttcctcaga--------tgaggaacatctgTATATATCCAGAATCCTGTGGAGCAACTCGTAACCCGTGAGGACTGGGA---GCC----GACAGAGTCATCCCCAGGACAGATGGTTCTCA-ATACATCTCATAAAgcttcttagaagatcttacaggatcgcacaaccagtgagccacagcaggggccgactggataacacggctttgcacgggct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1452675 287 + 1977891 atgatgggcttatcagggtattaaatgtgtttctgacttacagta-tttttgacttaccaagtgtttattgggacataaccccttcctcaga--------tgaggaacatctgTATATATCCAGAATcctgtggagcaactcgtaacccatgaggactggga---gccgacagacagattcatccccaggacagatggttctca-atacatctcataaagcttcttagaagatcttataggatcgcacaaccagtcagccacagcaggggccgactggataacacggctttgcacgggct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7389524 287 - 7796314 atgatggGCTTAttagggtattaaatgtgtttctgacttacagtg-tttttgacttaccaagtgtttattgggacgtaaccccttcctcaga--------tgaggaacatctgTATATATCCAGAATcctgtggagcaactcgtaacccatgaggactggga---gccgacagacagattcatccccaggacagatggttctca-atacctctcataaagcttcttagaagatcttacaggatcgcacaaccagtcagccacagcaggggccgactggataacacgtctttgcacgggct i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73868486 274 + 74750902 acgatgggcttatcagAggcttaca--tgtttctgacttac-----------------cacttgtttatcgggacataaccccttcctaagacgaggaacCGAGGAACATCTGTATGTATCCAGAATcctgtgcagcaactcgtaactcatgaggaatggga---gcc----gacagattcattcccaggacagacggttctcagatacatctcagaaagcttcttagaagatcgtacaggatcaagcaaccagccagccagagcaggggccaactggataacacatctctgcacgggct i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17304622 286 - 17725628 atgatgggcttgtcagAgtattaaa--tgtttctgacttacagta-tttttgacttatcacttg-ttatcgggacagaatcccttcctaagacgaagaacCGAGGAACATCTGTATGTA-CCAGAATcctgtggagcagcttgtaactcatgaggagtggga---gcc----gacagattcactcccaggacagatagttctcagacacgtctcatgaagcttcttagaagatggtacaggatcaagcaaccagccagccacagca-gggccaaccgga-gacgcatctttgcacgggcg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6398440 287 + 6778120 ATGATGGGCTTATCAGAgtgttaac--tgcttctgacttacagta-tttttgacttaccacttgtttatcgggacggaaccccttcctaagacgaagaacCGAGGAACATCTGTAGGTATCCAGAATcctgtg-agcaactcgtaactcatgaggaatggga---gcc----gacagattcatt-ccaggacagatggttctcagacacgtctcataaagcttcttagaagatcgtacaggatcaagccaccagccagccacagcaggggccaactgga-gacacgtctttgcacgggcg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 33895 289 + 69927 atgatggGCTTATCAGAgtatcaaa--tgtttctgacttacagta-tctttgacccaccacttgtttttcggaacgtaa-cccttcctaagacgaagaacCGAGGAGCATCTCTATGTATCCAGAATCCTGTggagcaactcataacccgtgaggaatagga---gcc----gacagactcattcccaggacggacggttctcagatacatctcagaaagcttcttagaagatcgtacaggatcaagcaaccagccagccacagcaggggccaactgggtaacacatctctgcacaggct i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 32803115 208 + 98207768 -----------ATCACTCTATTACATATGTTTTTAA-------TA--------------------------------------------------------------------TATATTTCCAAGACTCTGTAGGCCAACTTGTAGTCCATGGGAAAGGAGACAGGCA----CACTGATCTGTTACCA-GATAGATGCCtttcagacacattccccaaggtctcttagaagatcccacagg-cgaagcaactagccagccacagctagagccgactggagggtaggtctttgtgctggcc i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223040 339 + 608964 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=2576105.000000 s hg38.chr3_KI270934v1_alt 79393 294 + 163458 ctccctctgtccctgtc--acc-----ctccccttttcctaa-ccttgttccttgggattatgttttgaaataaattaTTCAGAGAAATGAAGCCAAAGCTGACCCATTAGCCAATAGCTAGGTTCTGTGATGACAGAGCTTCTGGGCTATAATCGTTTACTGAGAAGCCAGCGTTC-------------------CTGAGG---------GGATAATGGCTCGTTCCATTCAgctgcagcataggagtg----agggcagggcattagcagaagataacaccagaaacgtgctctgggg-cctgtt---gatgactttctgtgccaagcgtagacat s panTro5.chr3 2551602 294 - 202621043 ctccctctgtccctgtc--acc-----ctccccttttcctaa-ccttgttccttgggattatgttttgaaataagttaTTCAGAGAAATGAAGCTAAAGCTGACCCATTAGCCAATAGCTAGGTTCTGTGATGACAGGGCTTCTGGGCTATAATCGTTTACTGAGAAGCCAGCGTTC-------------------CCGAGG---------GGATAATGGCTCGTTCCATTCAgctgcagcataggagtg----agggcagggcattagcagaagataacaccagaaacgtgctctgggg-cctgtt---tatgactttctatgccaagcgtagatat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141358 294 - 190779 ctccctctgtccctgtc--acc-----ctccccttttcctaa-ccttgttccttgggattatgttttgaaataagttaTTCAGAGAAATGAAGCTAAAGCTGACCCATTAGCCAATAGCTAGGTTCTGTGATGACAGGGCTTCTGGGCTATAATCGTTTACTGAGAAGCCAGCGTTC-------------------CCGAGG---------GGATAATGGCTCGTTCCATTCAgctgcagcataggagtg----agggcagggcattagcagaagataacaccaaaaacgtgctctgggg-cctgtt---tatgactttctatgccaagcgtagatat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 95875 292 - 106623 ctccctctgtccctgtc--acc-----ctccccttttcctaa-ccttgttccttgggattatgttttgaaataaattaTTCAGAGAAATGAAGCTAAAGCTGACCCATTAGCCAATAGCTGGGTTCTGTGATGACAGGGCTTCTGGGCTATAATCATTTACTGAGAAGCCAGCGTTC-------------------C-GAGG---------GGATAATGGCTCGTT-CATTCAGCTGCAGCATAGGAGTG----GGTGCAGGGCGTTAGCAGAAGATAACACCAGAAACGTGCTCTGGGG-CCTGCT---GATGACTTTCTGTGCCAAGCATAGGCAT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2371877 295 - 204787373 ctccctctgtccctgtct-ccc-----ctccccttttcctaa-ccttgttccttgggattatgttttgaaataaattaTTCAGAGAAATGAAGCTAAAGCTGACCAATTAGCCAATAGCTGGGTTCTGTGCTGACAGGGTTTCCGGGCTATAATCATTTACAGAGAAGCCAgtgttc-------------------ccgagg---------ggataatggctctttccattcagctaccgcatgggagtg----ggtgcagggcattagcagaagataaggccagaaatgggcactgggg-cctgtt---gatgactttctgtgccaagtgtaggcat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192437794 295 - 192460366 ctccctctgtccctgtct-ccc-----ctccccttttcctaa-ccttgttccttgggattatgttttgaaataaattaTTCAGAGAAATGAAGCTAAAGCTGACCAATTAGCCAATAGCTGGGTTCTGTGCTGACAGGGTTTCCGGGCTATAATCATTTACAGAGAAGCCAGTGTTC-------------------CCGAGG---------GGATAATGGCTCTTTCCATTCAGCTACCGCATGggagtg----ggtgcagggcattagcagaagataaggccagaaatgggcactgggg-cctgtt---gatgactttctgtgccaagtgtaggcat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19177695 295 - 19675229 ctccctctgtccctgtct-ccc-----ctccccttttcctaa-ccttgttccttgggattatgttttgaaataaattaTTCAGAGAAATGAAGCTAAAGCTGACCAATTAGCCAATAGCTGGGTTCTGTGCTGACAGGGTTTCCGGGCTATAATCATTTACGGAGAAGCCAgtgttc-------------------ccaagg---------ggataatggctctttccattcagctaccgcatgggagtg----ggtgcagggcattagcagaagataaggccagaaatgggcactgggg-cctgtt---gatgactttctgtgccaagtgtaggcat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16413617 296 - 16847902 ctccctctgtccctgtctcccc-----ccccccttttccccc-cccccctccttgggattatgttttgaaataaattaTTCAGAGAAATGAAGCTAAAGCTGACCAATTAGCCAATAGCTGGGTTCTGTGCCGACAGGGTTTCTGGGCTATAATCATTTACGGAGAAGCCAgtgttc-------------------ccgagg---------ggataatggctctttccattcggctaccgcatgggagtg----ggtgcagggcattagcagaagataaggccagaaatgggcactgggg-ccTGTT---GATGACTTTCTGTGCTAAGTGTAGGCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91382461 293 + 91754291 ctccctctgtccctgtct-ccc-----ctccccttttcctaa-ccttgttccttgggattatgttttgaaataaattaTTCAGAGAAATGAAGCTAAAGCTGACCAATTAGCCAATAGCTGGGTTCTGTGCCGACAGGGTT--CTGGCTATAATCATTTACTGAGAAGCCGGTGTTC-------------------CCGAGG---------GGATAACGGCTCTTTCCATTCGCCTACCGCATAggagtg----ggtgcggggcattagcagatgataaggccagaaatgggcactgggg-cctgtt---gatgactttctgtgccaagtgtaggcat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1452962 295 + 1977891 ctccctctgtccctgtct-ccc-----ctccccttttcctaa-ccttattccttgggattatgttttgaaataaattaTTCAGAGAAATGAAGCTAAAGCTGACCAATTAGCCAATAGCTGGGTTCTGTGCCAACAGGGTTTCCAGGCTATAATCATTTACGGAGAAGCCTgtgttc-------------------ccgagg---------ggataatggctctttccattcggctaccgcatgggagtg----ggtgcagggcattagcagaagataaggccagaaatgggcactgggg-cctgtt---gatgactttctgtgccaagtgtaggcat i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7389811 295 - 7796314 gtccctctgtccctgtct-ccc-----ctcccctttgcctaa-ccttgttccttgggattatgttttgaaataaattaTTCAGAGAAATGAAGCTAAAGCTGACCAATTAGCCAACAGCTGGGTTCTGTGCCGACAGGGTTTCTGGGCTATAATCATTTACTGAGAAGCCAgtgttc-------------------ctgagg---------ggataatggctctttccagttggctacagcataggagtg----ggtgcagggcattaacagaagataaggccagaaatgggcactgggg-ccTGTT---GATGACTTTCTGTGCCAAGTGTAGGCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73868760 298 + 74750902 ctccctctgtccctgttc-taaccttgctctccttttcctaa-ccttgctc--tgagattatgttccaaaataaattaTTCAGAGAAATGGAGCTAAAGCTGACCCATTAGCCAATGGCTGCGTCCTGCGCTGACCGGGCTTCTGTGCTATAAACATTTACTGAGAAACCAGCGTTC-------------------Ctttgg---------ggaaaatgg-tcattccattcagctgcagcataggaagggggtggggcaggggattagcaggagataagaccagaaatgtgcactggggccCTGTT---GGGGAC----TGCGCCAAGCGTAGGCGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17304908 298 - 17725628 ctccctctgtccctgtct-cac-----ctctccttttcctaa-ccttgctctttgagactatgttccaaaataaattaTTCAGAGAAATGGAGCTAAAGCTGACCCATTAGCCAACAGCTGGGTCCCGCGCTAACAGGGCTTCTGTGCTGGAAACGTTTACTGAGGAACCAGTGTTC-------------------CCTCTC---------GGATAATGG-TCGTTCCATTCAGATGCAGCATAGGAAGGGGGTGGGGCAGGGG-TTAGCAGGAGACAAGACCAGAAGTGTGCCCCGGGGCCCTGCT---CATGACTCTTTGCGCCAAGCGTTGGCGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6398727 295 + 6778120 ctccctctgtccctgtct-cac-----ctccccttttcctaa-ccttgctctttgagattatgttccaaaataaattaTTCAGAGAAATGGAGCTAAAGCTGACCAGTCAGCCAATAGCTGGGTACAGCGCTGACAGGGCTTCTGTGCTACAAACATTTACTGAGAAACCAGCGTTC-------------------CCTCGG---------GG-TAGTGG-TCGTTCCATTCAgctgcagtacaggaaggtg--ggggcaggga-ttagcaggacataagaccagaagtgtgcactggggccctgtt---gatgactctttgcgccacgcgcaggcgt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34184 299 + 69927 ctccctctgtacctgtct-cac-----ctctccttttcctaa-ccttgctctttgagactatgttccgaaataaattaTTCAGAGAAATGGAGCTAAAGCTGACCCATTAGCCAATAGCTGGGTCCTGCACTGACAGGGCTTCTGTGCTATAAACATTTACTGAGAAACCAGTGTTC-------------------CCTTGG---------GGATAACGG-TCATTCCATTCAgctgcagcataggaagggtgtggggcaggggactagcaggagatgagaccagaaatgtgcactggggccctgtt---gatgactctttgcgccaagcgtaggcat i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 223379 298 + 608964 ctccctttatccccgttc-cac-----ttccccgttccctaatccctgctcctggggattatgtgcctaaataaattaGTCAGAGAAACTAGGTTAAAGCACACCCATTAGCCAACAGCTGGGCTCCGTGCCCACAGGGTTCCTGTGCTATAATCATTTGCTTAGAAACCAGTGTTC-------------------CCTAGG---------GGACAAGGGGTCATTCTACCC--CCACAACATAGGAGTG----GGCGCAGGGGACTTGCAGGAGATAAGGCCAGGAATGTGCCCTGGGGCCCTGTTGTGGAGAATTTTGTGTGCCAGGCGTGGGAGC i otoGar3.GL873829 I 339 C 0 s mm10.chr16 32803323 307 + 98207768 ctccctccatccctgtt--tta-----tttgccttactctaa-tcc----cattggagttatgttcctaaataaattccttAGAGAAATTAAGCCAACACAAAACCATTAGCCAAGAGCTGGGCTCTGGGCCAACAGGGATCCT-TGCTGCAATCAGTTGCCCAGAAACAAGGGTTCAGATTAGCAAAGGCCCAGACCAAGGCTTGGGTGAGGAGAATGGGGGATCCTGTTCAGCTGCA-CCCAAGAGTG----GGTGAGGGGGATTAGCAGG-GATAAAGCTGGAGGTCTGCA---GAG-CTTGGT---GGTGGCAGGCCAGACCCAGTACT----- i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e canFam3.chr33 2335825 2307 - 31377067 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=254118.000000 s hg38.chr3_KI270934v1_alt 79687 65 + 163458 ttagcctttattctgtatgtgatgggaagccagtgccagtggtgg-gtttgagcagggaaCCAGCA s panTro5.chr3 2551896 65 - 202621043 ttagcctttattctgtaggtgatgggaagccagtgccagtggtgg-gtttgagcagggaaCCAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141652 65 - 190779 ttagcctttattctgtaggtgatgggaagccagtgccagtggtgg-gtttgagcagggaaCCAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 2372172 35 - 204787373 ttagcctttattctgtaggtgatgggaagccagtg------------------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438089 35 - 192460366 ttagcctttattctgtaggtgatgggaagccagtg------------------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19177990 35 - 19675229 ttagcctttattctgtaggtgatgggaagccagtg------------------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16413913 35 - 16847902 TTAGCCTTTATTCTGTAGGTGATGGGAAGCCAGTG------------------------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91382754 65 + 91754291 ttagcctttattctgtaggtgatgggaagccagtgccagtggtgg-gtttgagcaggaaactagca i chlSab2.chr15 C 0 I 28 s manLeu1.NW_012102020v1 1453257 65 + 1977891 ttagcctttattctgtaggtgatgggaagccagtgccagtggtgg-gtttgagcagggaactagca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390106 51 - 7796314 TTAGCCTTTATTCTGTAGGTGATGGGAAGCCAGTGCCAGTGGTGG-GTTTGA-------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869058 35 + 74750902 TCAGCCTTTCTTCTGTAGATGATGGGAAGCCAGTT------------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305206 34 - 17725628 T-AGCCTTTATTCTGTAGGTGACGGGAAGCCAGTT------------------------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6399022 64 + 6778120 tcagcctttattccgtaggtgatgggaag-cagttccagtggtgg-gtttgagcagggaaacagca i cebCap1.NW_016107444v1 C 0 I 54 s aotNan1.NW_018503669v1 34483 65 + 69927 tcagcctttattctatagacgatgggaagccacttccagtggggg-gtctgagcagggaaCCAGCA i aotNan1.NW_018503669v1 C 0 I 7 s otoGar3.GL873829 223677 37 + 608964 -TGAGCTTTATTCTGTAGATGAGGGAAAGCTGGAGGGA---------------------------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32803630 60 + 98207768 TTCACATCTAGTCTGTCGAGAATGGGAAGCCATTG------ATGGCCTCTCAACAGGGAGCTGGCT i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e canFam3.chr33 2335825 2307 - 31377067 I e nomLeu3.chr11 2859940 8064 - 123690457 I e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=422.000000 s hg38.chr3_KI270934v1_alt 79752 1 + 163458 A s panTro5.chr3 2551961 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141717 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s manLeu1.NW_012102020v1 1453322 1 + 1977891 a i manLeu1.NW_012102020v1 C 0 I 28 s mm10.chr16 32803690 1 + 98207768 G i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e aotNan1.NW_018503669v1 34548 7 + 69927 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e macNem1.NW_012014355v1 19178025 0 - 19675229 C e saiBol1.JH378146 17305240 0 - 17725628 C e calJac3.chr17 73869093 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223714 0 + 608964 C e colAng1.NW_012118932v1 7390157 0 - 7796314 C e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16413948 0 - 16847902 C e macFas5.chr2 192438124 0 - 192460366 C e rheMac8.chr2 2372207 0 - 204787373 C e nomLeu3.chr11 2859940 8064 - 123690457 I e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=9000.000000 s hg38.chr3_KI270934v1_alt 79753 2 + 163458 CC s panTro5.chr3 2551962 2 - 202621043 CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141718 2 - 190779 CC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 2372207 2 - 204787373 cc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438124 2 - 192460366 cc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178025 2 - 19675229 cc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16413948 2 - 16847902 CC i cerAty1.NW_012004056v1 C 0 C 0 s calJac3.chr17 73869093 2 + 74750902 CC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305240 2 - 17725628 CC i saiBol1.JH378146 C 0 C 0 s mm10.chr16 32803691 2 + 98207768 CC i mm10.chr16 C 0 I 1023 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e aotNan1.NW_018503669v1 34548 7 + 69927 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223714 0 + 608964 C e colAng1.NW_012118932v1 7390157 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e nomLeu3.chr11 2859940 8064 - 123690457 I e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=24234.000000 s hg38.chr3_KI270934v1_alt 79755 9 + 163458 AGTGGTGGG s panTro5.chr3 2551964 9 - 202621043 AGTGGTGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141720 9 - 190779 AGTGGTGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 2372209 9 - 204787373 agtggtggg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438126 9 - 192460366 agtggtggg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178027 9 - 19675229 agtggtggg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16413950 9 - 16847902 AGTGGTGGG i cerAty1.NW_012004056v1 C 0 C 0 s calJac3.chr17 73869095 9 + 74750902 AGTGGTGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305242 9 - 17725628 GGCTCGGGG i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 223714 2 + 608964 -------GG i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34548 7 + 69927 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2717229 1617 - 6579706 I e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e colAng1.NW_012118932v1 7390157 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e nomLeu3.chr11 2859940 8064 - 123690457 I e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=119136.000000 s hg38.chr3_KI270934v1_alt 79764 26 + 163458 TTTGAGCAGGGAACCAGCAATACTCA s panTro5.chr3 2551973 26 - 202621043 TTTGAGCAGGGAACCAGCAATACTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141729 26 - 190779 TTTGAGCAGGGAACCAGCAATACTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 2372218 26 - 204787373 tttgagcagggaactagcaATACTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438135 26 - 192460366 tttgagcagggaactagcaATACTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178036 26 - 19675229 tttgagcagggaactagcaATACTCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16413959 26 - 16847902 TTTGAGCAGGGAACTAGCAATACTCA i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 7390157 21 - 7796314 -----GCAGGGAACTAGCAATACTCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869104 26 + 74750902 TTTGAGCAGGAAACCAGCAGTACCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305251 26 - 17725628 TTTGAGCAGGGAAACAGCAGTGCCAG i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 223716 26 + 608964 TTTGAGGGGAGAGCCAGCAACACCAG i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2718846 26 - 6579706 TTTGAGCAGGGAACTGGCAACACCAG i dasNov3.JH569502 I 1617 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34548 7 + 69927 I e micMur3.chr1 88402761 1634 + 114275543 I e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e nomLeu3.chr11 2859940 8064 - 123690457 I e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=79778.000000 s hg38.chr3_KI270934v1_alt 79790 12 + 163458 AGCTCTGCTTGG s panTro5.chr3 2551999 12 - 202621043 AGCTCTGCTAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141755 12 - 190779 AGCTCTGCTAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 2372244 12 - 204787373 AGCTCTGCTTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438161 12 - 192460366 AGCTCTGCTTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178062 12 - 19675229 AGCTCTGCTTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16413985 12 - 16847902 AGCTCTGCTTGG i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 7390178 12 - 7796314 AGCTCTGCTTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869130 12 + 74750902 AGCTCTGCTTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305277 12 - 17725628 AGCTCTGCTTGG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 34555 12 + 69927 AGCTCTGCTTGG i aotNan1.NW_018503669v1 I 7 C 0 s otoGar3.GL873829 223742 12 + 608964 AGCTCTGCTTTG i otoGar3.GL873829 C 0 I 8 s dasNov3.JH569502 2718872 12 - 6579706 AGCTCTACCTGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e micMur3.chr1 88402761 1634 + 114275543 I e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e nomLeu3.chr11 2859940 8064 - 123690457 I e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=49170.000000 s hg38.chr3_KI270934v1_alt 79802 10 + 163458 ATGGAGGCCA s panTro5.chr3 2552011 10 - 202621043 ATGGAGGCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141767 10 - 190779 ATGGAGGCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 2372256 10 - 204787373 ACAGAGGCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438173 10 - 192460366 ACAGAGGCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178074 10 - 19675229 ACAGAGGCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16413997 10 - 16847902 ACAGAGGCCG i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 7390190 10 - 7796314 ACAGAGGCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869142 10 + 74750902 GCGGAGGCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305289 10 - 17725628 GCGGAGGCCA i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 34567 10 + 69927 GCGGAGGCCA i aotNan1.NW_018503669v1 C 0 C 0 s dasNov3.JH569502 2718884 10 - 6579706 GCAGAGACCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e micMur3.chr1 88402761 1634 + 114275543 I e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e nomLeu3.chr11 2859940 8064 - 123690457 I e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=105785.000000 s hg38.chr3_KI270934v1_alt 79812 19 + 163458 GTCAGGGAGGAGTTAGGGC s panTro5.chr3 2552021 19 - 202621043 GTCAGGGAGGAGTTAGGGC i panTro5.chr3 C 0 I 31 s panPan2.chrUn_NW_014024201v1 141777 19 - 190779 GTCAGGGAGGAGTTAGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868004 19 - 123690457 GTCAGGGAGGAGTTAGGGT i nomLeu3.chr11 I 8064 C 0 s rheMac8.chr2 2372266 19 - 204787373 GTCAGGGAGGAGTTAGGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438183 19 - 192460366 GTCAGGGAGGAGTTAGGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178084 19 - 19675229 GTCAGGGAGGAGTTAGGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16414007 19 - 16847902 GTCAGGGAGGAGTTAGGGC i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 7390200 19 - 7796314 GTCAGGGAGGAGTTAGGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869152 19 + 74750902 GCAAGGGAAGAGTTAGGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305299 19 - 17725628 GGAAGGGAAGAGTTAGGTC i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 34577 19 + 69927 GTAACGGAAGAGTTAGGGC i aotNan1.NW_018503669v1 C 0 C 0 s dasNov3.JH569502 2718894 18 - 6579706 CTTAGGGGAGAGTCTGGG- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e micMur3.chr1 88402761 1634 + 114275543 I e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=27908.000000 s hg38.chr3_KI270934v1_alt 79831 9 + 163458 AGGAGGACC s panTro5.chr3 2552071 9 - 202621043 AGGAGGACC i panTro5.chr3 I 31 C 0 s panPan2.chrUn_NW_014024201v1 141796 9 - 190779 AGGAGGACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868023 9 - 123690457 AGGACGACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2372285 9 - 204787373 AGGGGGACC i rheMac8.chr2 C 0 T 28 s macFas5.chr2 192438202 9 - 192460366 AGGGGGACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178103 9 - 19675229 AGGGGGACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16414026 9 - 16847902 AGGCGGACC i cerAty1.NW_012004056v1 C 0 T 29 s colAng1.NW_012118932v1 7390219 9 - 7796314 AGGCGGACC i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 2718912 8 - 6579706 -GCAGGGCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=37075.000000 s hg38.chr3_KI270934v1_alt 79840 25 + 163458 AGTCA--GGGAGGAGACTTAGG------GCAGG s panTro5.chr3 2552080 25 - 202621043 GGTCA--GGGAGGAGACTCAGG------GCAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141805 25 - 190779 GGTCA--GGGAGGAGACTTAGG------GCAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868032 23 - 123690457 AGTCA--GGGAGGAG--TTAGG------GCAGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438211 23 - 192460366 AGTCC--GGGAGGAG--CTAGG------GCAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178112 23 - 19675229 AGTCG--GGGAGGAG--CTAGG------GCAGG i macNem1.NW_012014355v1 C 0 C 0 s colAng1.NW_012118932v1 7390228 23 - 7796314 GGTCA--GGGAGGAG--TTAGG------GCAGG i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 2718920 33 - 6579706 GGTTAAGAGGAGGTGACCTAGGACTCCAGCAGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16414035 29 - 16847902 T e rheMac8.chr2 2372294 28 - 204787373 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=17079.000000 s hg38.chr3_KI270934v1_alt 79865 24 + 163458 AGGACCAGTCAGGGAGGAGACTTA-------- s panTro5.chr3 2552105 24 - 202621043 AGGACAGGTCAGGGAGGAGACTCA-------- i panTro5.chr3 C 0 T 108 s panPan2.chrUn_NW_014024201v1 141830 24 - 190779 AGGACCGGTCAGGGAGGAGACTCA-------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868055 22 - 123690457 AGGCCGGGTCAGGGAGGAG--TTA-------- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438234 22 - 192460366 GGGACCGGTCGGGGAGGAG--CTA-------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178135 22 - 19675229 AGGACCGGTCGGGGAGGAG--CTA-------- i macNem1.NW_012014355v1 C 0 C 0 s dasNov3.JH569502 2718953 32 - 6579706 GGGAATGTAAAGGGATGAATATGAGTGACATC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16414035 29 - 16847902 T e rheMac8.chr2 2372294 28 - 204787373 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=6295.000000 s hg38.chr3_KI270934v1_alt 79889 5 + 163458 GGGCA s panPan2.chrUn_NW_014024201v1 141854 5 - 190779 GGGCA i panPan2.chrUn_NW_014024201v1 C 0 T 82 s nomLeu3.chr11 2868077 5 - 123690457 GGGCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438256 5 - 192460366 GGGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178157 5 - 19675229 GGGCA i macNem1.NW_012014355v1 C 0 C 0 s dasNov3.JH569502 2718985 5 - 6579706 GTGCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16414035 29 - 16847902 T e rheMac8.chr2 2372294 28 - 204787373 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C e panTro5.chr3 2552129 108 - 202621043 T a score=2349.000000 s hg38.chr3_KI270934v1_alt 79894 4 + 163458 GGAG s nomLeu3.chr11 2868082 4 - 123690457 GGGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438261 4 - 192460366 GGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178162 4 - 19675229 GGGG i macNem1.NW_012014355v1 C 0 C 0 s dasNov3.JH569502 2718990 4 - 6579706 GTAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16414035 29 - 16847902 T e rheMac8.chr2 2372294 28 - 204787373 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C e panPan2.chrUn_NW_014024201v1 141859 82 - 190779 T e panTro5.chr3 2552129 108 - 202621043 T a score=2553.000000 s hg38.chr3_KI270934v1_alt 79898 5 + 163458 GACTG s nomLeu3.chr11 2868086 5 - 123690457 GACCG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438265 5 - 192460366 GACCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178166 5 - 19675229 GACCG i macNem1.NW_012014355v1 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16414035 29 - 16847902 T e rheMac8.chr2 2372294 28 - 204787373 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C e panPan2.chrUn_NW_014024201v1 141859 82 - 190779 T e panTro5.chr3 2552129 108 - 202621043 T a score=26588.000000 s hg38.chr3_KI270934v1_alt 79903 19 + 163458 GTCAGGGAGGAGTTAGGGC s panTro5.chr3 2552021 19 - 202621043 GTCAGGGAGGAGTTAGGGC i panTro5.chr3 T 108 C 0 s panPan2.chrUn_NW_014024201v1 141777 19 - 190779 GTCAGGGAGGAGTTAGGGC i panPan2.chrUn_NW_014024201v1 T 82 C 0 s nomLeu3.chr11 2868091 19 - 123690457 GTCAGGGAGGAGTTAGGGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438270 19 - 192460366 GTCGGGGAGGAGTTAGGGC i macFas5.chr2 C 0 T 29 s macNem1.NW_012014355v1 19178171 19 - 19675229 GTCGGGGAGGAGTTAGGGC i macNem1.NW_012014355v1 C 0 T 106 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16414035 29 - 16847902 T e rheMac8.chr2 2372294 28 - 204787373 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=39675.000000 s hg38.chr3_KI270934v1_alt 79922 62 + 163458 TGGAGGACGGGTCAGGGAGGAGACTTAGGGTAGGAGGACTGGTCAGGGAG--GAGACTTAGGGC s panTro5.chr3 2552040 62 - 202621043 AGGAGGACCGGTCAGGGAGGAGACTTAGGGCAGGAGGACCGGTCAGGGAG--GAGACTCAGGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141796 62 - 190779 AGGAGGACCGGTCAGGGAGGAGACTTAGGGCAGGAGGACCGGTCAGGGAG--GAGACTCAGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868110 58 - 123690457 AGGGGGCCGGGTCAGGGATGAG--TTAGGGTAGGAGGACCAGTCAGGGAG--GAG--TTAGGGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438260 62 - 192460366 AGGGGGACCGGTCGGGGAGGAG--TTAGGGCAGGGGGACCAGTTAGGAGGCCGTGACCCAGGAC i macFas5.chr2 T 29 T 144 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178190 106 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16414035 29 - 16847902 T e rheMac8.chr2 2372294 28 - 204787373 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=28132.000000 s hg38.chr3_KI270934v1_alt 79984 84 + 163458 AGGAGGACTGGTCAGGGAGGAGACTTAGGGCAGGAGGACTGGTCAGGGAGGAGACTTAGGGCAGGAGGACCGGTCAGGGAGGAG s panTro5.chr3 2552102 83 - 202621043 AGGAGGACAGGTCAGGGAGGAGACTCAGGGCAGGAGGACAGGTCAGGGAGGAGACTT-GGGCAGGAGGACCAGTCAGGGAGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141858 84 - 190779 AGGAGGACAGGTCAGGGAGGAGACTCAGGGCAGGAGGACAGGTCAGGGAGGAGACTTAGGGCAGGAGGACGGGTCAGGGAGGAG i panPan2.chrUn_NW_014024201v1 C 0 T 153 s nomLeu3.chr11 2868168 51 - 123690457 AGGGGGACCAGTCAGGGAGGAG--TTAGGGCAGGGGGACCGGTCAGGGAGGAG------------------------------- i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178190 106 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16414035 29 - 16847902 T e macFas5.chr2 192438322 144 - 192460366 T e rheMac8.chr2 2372294 28 - 204787373 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=191.000000 s hg38.chr3_KI270934v1_alt 80068 2 + 163458 AC s nomLeu3.chr11 2868219 2 - 123690457 AC i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178190 106 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16414035 29 - 16847902 T e macFas5.chr2 192438322 144 - 192460366 T e rheMac8.chr2 2372294 28 - 204787373 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C e panPan2.chrUn_NW_014024201v1 141942 153 - 190779 T e panTro5.chr3 2552185 0 - 202621043 C a score=3645.000000 s hg38.chr3_KI270934v1_alt 80070 7 + 163458 TTAGGGT s panTro5.chr3 2552185 7 - 202621043 TTAGGGC i panTro5.chr3 C 0 T 152 s panPan2.chrUn_NW_014024201v1 141789 7 - 190779 TTAGGGC i panPan2.chrUn_NW_014024201v1 T 153 C 0 s nomLeu3.chr11 2868221 7 - 123690457 TTAGGGC i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178190 106 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16414035 29 - 16847902 T e macFas5.chr2 192438322 144 - 192460366 T e rheMac8.chr2 2372294 28 - 204787373 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=10059.000000 s hg38.chr3_KI270934v1_alt 80077 24 + 163458 AGGAGGACCGGTCAGGGAGGAGAC s panTro5.chr3 2552040 24 - 202621043 AGGAGGACCGGTCAGGGAGGAGAC i panTro5.chr3 T 152 C 0 s panPan2.chrUn_NW_014024201v1 141796 24 - 190779 AGGAGGACCGGTCAGGGAGGAGAC i panPan2.chrUn_NW_014024201v1 C 0 T 31 s nomLeu3.chr11 2868228 21 - 123690457 AGGAGG-CCAGTCAGGGAGGAG-- i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178190 106 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16414035 29 - 16847902 T e macFas5.chr2 192438322 144 - 192460366 T e rheMac8.chr2 2372294 28 - 204787373 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=53775.000000 s hg38.chr3_KI270934v1_alt 80101 132 + 163458 TTAGGGCAGGAGGACCGGTCAGGGAGGAGACTTAGGGCAGGAGGACTGGTCAGGGAGGAGACTTAGGGCAGGAGGACTGGTCAGGGAGGAGACTTAGGGCAGGAGGACAGGTCAGGGAGGAGACTTAGGGCT s panTro5.chr3 2552064 121 - 202621043 TTAGGGCAGGAGGACCGGTCAGGGAGGAGACTCAGGGCAGGAGGACAGGTCAGGGAGGAGACTCAGGGCAGGAGGACAGGTCAGGGAGGAGACTT-GGGCAGGAGGACCAGTCAGGGAGGAG---------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141789 132 - 190779 TTAGGGCAGGAGGACCGGTCAGGGAGGAGACTTAGGGCAGGAGGACCGGTCAGGGAGGAGACTCAGGGCAGGAGGACAGGTCAGGGAGGAGACTCAGGGCAGGAGGACAGGTCAGGGAGGAGACTTAGGGCA i panPan2.chrUn_NW_014024201v1 T 31 T 62 s nomLeu3.chr11 2868249 124 - 123690457 TTAGGGCAGGGGGCTGGGTCAGGGAGGAG--TTAGGGCAGGGGGCTGGGTCAGGGAGGAG--TTAGGGCAGGGGGACCGGTCAGGGAGGAG--TTAGGGCAGGGGGACCGGTCAGGGAGGAG--TTAGGGCA i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178190 106 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16414035 29 - 16847902 T e macFas5.chr2 192438322 144 - 192460366 T e rheMac8.chr2 2372294 28 - 204787373 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=23198.000000 s hg38.chr3_KI270934v1_alt 80233 70 + 163458 GGAGGACGGGTCAGGGAGGAGACTTAGGGCAGGAGGACTGGTCAGGGAGGAGACTTAGGGCAGGAGGACG s panTro5.chr3 2552185 47 - 202621043 -----------------------TTAGGGCTGGAGGACAGGTCAGGGAGGAGACTTAGGGCAGGAGGACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141859 70 - 190779 GGAGGACAGGTCAGGGAGGAGACTCAGGGCAGGAGGACAGGTCAGGGAGGAGACTTAGGGCAGGAGGACG i panPan2.chrUn_NW_014024201v1 T 62 C 0 s nomLeu3.chr11 2868373 67 - 123690457 GGGGGACCGGTCAGGGAGGAGACTTAGGGCAGGAGGCCA-GTCAGGGAGGAG--TTAGGGCAGGGGGCTG i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178190 106 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16414035 29 - 16847902 T e macFas5.chr2 192438322 144 - 192460366 T e rheMac8.chr2 2372294 28 - 204787373 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=43874.000000 s hg38.chr3_KI270934v1_alt 80303 54 + 163458 GGTCAGGGAGGAGTTAGGGCTGGAGGACTGGTCAGGGAGGAGTTAGGGCTGGAG s panTro5.chr3 2552232 54 - 202621043 AGTCAGGGAGGAGTTAGGGCTGAAGGACCGGTCAGGGAGGAGTTAGGGCTGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141929 54 - 190779 GGTCAGGGAGGAGTTAGGGCTGAAGGACCGGTCAGGGAGGAGTTAGGGCAGGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868440 54 - 123690457 GGTCAGGGAGGAGTTAGGGCAGGGGGCTTGGTCAGGGAGGAGTTAGGGCAGGGG i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16414006 54 - 16847902 GGTCAGGGAGGAGTTAGGGCAGGCGGACCGGTCGGGGAGGAGTTAGGGCAGGGG i cerAty1.NW_012004056v1 T 29 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178190 106 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e macFas5.chr2 192438322 144 - 192460366 T e rheMac8.chr2 2372294 28 - 204787373 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=4198.000000 s hg38.chr3_KI270934v1_alt 80357 4 + 163458 GACT s panTro5.chr3 2552286 4 - 202621043 GACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141983 4 - 190779 GACT i panPan2.chrUn_NW_014024201v1 C 0 T 29 s nomLeu3.chr11 2868494 4 - 123690457 GACC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438178 4 - 192460366 GGCC i macFas5.chr2 T 144 C 0 s cerAty1.NW_012004056v1 16414060 4 - 16847902 GACC i cerAty1.NW_012004056v1 C 0 T 29 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178190 106 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e rheMac8.chr2 2372294 28 - 204787373 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=845.000000 s hg38.chr3_KI270934v1_alt 80361 1 + 163458 G s panTro5.chr3 2552290 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141958 1 - 190779 G i panPan2.chrUn_NW_014024201v1 T 29 C 0 s nomLeu3.chr11 2868498 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438182 1 - 192460366 A i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16414035 1 - 16847902 G i cerAty1.NW_012004056v1 T 29 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178190 106 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e rheMac8.chr2 2372294 28 - 204787373 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=69462.000000 s hg38.chr3_KI270934v1_alt 80362 27 + 163458 GTCAGGGAGGAGTTAGGGCAGGAGGAC s panTro5.chr3 2552291 27 - 202621043 GTCAGGGAGGAGTTAGGGCAGGGGGAC i panTro5.chr3 C 0 I 29 s panPan2.chrUn_NW_014024201v1 141959 27 - 190779 GTCAGGGAGGAGTTAGGGCAGGGGGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868499 27 - 123690457 GTCAGGGAGGAGTTAGGGCAGGAGGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2372266 27 - 204787373 GTCAGGGAGGAGTTAGGGCAGGGGGAC i rheMac8.chr2 T 28 C 0 s macFas5.chr2 192438183 27 - 192460366 GTCAGGGAGGAGTTAGGGCAGGGGGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178084 27 - 19675229 GTCAGGGAGGAGTTAGGGCAGGGGGAC i macNem1.NW_012014355v1 T 106 C 0 s cerAty1.NW_012004056v1 16414036 27 - 16847902 GTCGGGGAGGAGTTAGGGCAGGGGGAC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=58115.000000 s hg38.chr3_KI270934v1_alt 80389 30 + 163458 AGGTCAGGGAGGAGTTAGGGCTGGAGGACG s panTro5.chr3 2552347 30 - 202621043 CGGTCAGGGAGAAGTCAGGGCAGGAGGACT i panTro5.chr3 I 29 C 0 s panPan2.chrUn_NW_014024201v1 141986 30 - 190779 TGGTCAGGGAGGAGTTAGGGCAGGAAAATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868526 29 - 123690457 -AGTCAGGGAGGAGTTAGGACTGGAGGATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2372293 30 - 204787373 CGGTCGGGGAGGAGCTAGGGCAGGGGGACC i rheMac8.chr2 C 0 T 29 s macFas5.chr2 192438210 30 - 192460366 CAGTCCGGGAGGAGCTAGGGCAGGGGGACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178111 30 - 19675229 CAGTCGGGGAGGAGCTAGGGCAGGAGGACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16414063 30 - 16847902 CGGTCGGGGAGGAGTTAGGGCAGGGGGACC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=2800.000000 s hg38.chr3_KI270934v1_alt 80419 1 + 163458 G s panTro5.chr3 2552377 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142016 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868555 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2372294 1 - 204787373 G i rheMac8.chr2 T 29 C 0 s macFas5.chr2 192438240 1 - 192460366 G i macFas5.chr2 C 0 T 58 s macNem1.NW_012014355v1 19178141 1 - 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16414093 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=107941.000000 s hg38.chr3_KI270934v1_alt 80420 48 + 163458 GTCAGGGAGGAGTTAGGGCAGGAGGACTGGTCAGGGAGGAGTTAGGGC s panTro5.chr3 2552378 47 - 202621043 GTCAGAGAGGAGTTAGGGCAGGAGG-CCAGTCAGGGAGGAGTTAGGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142017 48 - 190779 GTCAGGGAGAAGTCAGGGCAGGAGGACTGGTCAGAGAGGAGTTAGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868556 48 - 123690457 GTCAGGGAGGAGTTAGGGCAGGGGGACTGGTCAGGGAGGAGTTAGGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2372295 48 - 204787373 GTCGGGGAGGAGCTAGGGCAGGGGGACCGGTCGGGGAGGAGCTAGGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438183 48 - 192460366 GTCAGGGAGGAGTTAGGGCAGGGGGACCAGTCCGGGAGGAGCTAGGGC i macFas5.chr2 T 58 C 0 s macNem1.NW_012014355v1 19178142 48 - 19675229 GTCGGGGAGGAGCTAGGGCAGGGGGACCGGTCGGGGAGGAGTTAGGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16414094 48 - 16847902 GTTGGGGAGGAGTTAGGGCAGGGGGACTGGTCGGGGAGGAGTTAGGGC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=10917.000000 s hg38.chr3_KI270934v1_alt 80468 8 + 163458 AGGAGGAC s panTro5.chr3 2552425 8 - 202621043 AGGAGGAC i panTro5.chr3 C 0 T 115 s panPan2.chrUn_NW_014024201v1 142065 6 - 190779 AGGAGG-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868604 8 - 123690457 AGGGGGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2372343 8 - 204787373 AGGGGGAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438231 8 - 192460366 AGGGGGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178190 8 - 19675229 AGGGGGAC i macNem1.NW_012014355v1 C 0 T 8 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16414142 0 - 16847902 C e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=2100.000000 s hg38.chr3_KI270934v1_alt 80476 6 + 163458 TGGTCA s nomLeu3.chr11 2868612 6 - 123690457 AGGTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2372351 6 - 204787373 CGGTCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438239 6 - 192460366 CGGTCG i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178198 8 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16414142 0 - 16847902 C e gorGor5.CYUI01000576v1 96167 0 - 106623 C e panPan2.chrUn_NW_014024201v1 142071 0 - 190779 C e panTro5.chr3 2552433 115 - 202621043 T a score=2992.000000 s hg38.chr3_KI270934v1_alt 80482 23 + 163458 GAGAGGAGTTAGGGCAGCAGTAT s panPan2.chrUn_NW_014024201v1 142071 1 - 190779 ----------------------C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868618 23 - 123690457 GGGAGGAGTTAGGGCAGGGGGAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438245 23 - 192460366 GGGAGGAGCTAGGGCAGGGGGAC i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178198 8 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16414142 0 - 16847902 C e rheMac8.chr2 2372357 0 - 204787373 C e gorGor5.CYUI01000576v1 96167 0 - 106623 C e panTro5.chr3 2552433 115 - 202621043 T a score=476.000000 s hg38.chr3_KI270934v1_alt 80505 1 + 163458 C s panTro5.chr3 2552318 1 - 202621043 T i panTro5.chr3 T 115 C 0 s panPan2.chrUn_NW_014024201v1 142072 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 T 86 s nomLeu3.chr11 2868641 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438268 1 - 192460366 C i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178198 8 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16414142 0 - 16847902 C e rheMac8.chr2 2372357 0 - 204787373 C e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=23839.000000 s hg38.chr3_KI270934v1_alt 80506 29 + 163458 GGTCAGGGAGGAGTTAGGGCAGGAGGACC s panTro5.chr3 2552319 29 - 202621043 GGTCAGGGAGGAGTTAGGGCAGGAAAATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141987 29 - 190779 GGTCAGGGAGGAGTTAGGGCAGGAAAATC i panPan2.chrUn_NW_014024201v1 T 86 C 0 s nomLeu3.chr11 2868642 29 - 123690457 GGTCAGGGAGGAGTTAGGGCAGGAGGACG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438269 29 - 192460366 GGTCGGGGAGGAGTTAGGGCAGGGGGACC i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178198 8 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e chlSab2.chr15 91382819 28 + 91754291 I e cerAty1.NW_012004056v1 16414142 0 - 16847902 C e rheMac8.chr2 2372357 0 - 204787373 C e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=10895.000000 s hg38.chr3_KI270934v1_alt 80535 10 + 163458 GGTCAGGGAG s panTro5.chr3 2552348 10 - 202621043 GGTCAGGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142016 10 - 190779 GGTCAGGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868671 10 - 123690457 GGTCAGGGAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438298 10 - 192460366 AGTTAGGAGG i macFas5.chr2 C 0 T 19 s chlSab2.chr15 91382847 10 + 91754291 GGTCAGCGAG i chlSab2.chr15 I 28 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178198 8 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e cerAty1.NW_012004056v1 16414142 0 - 16847902 C e rheMac8.chr2 2372357 0 - 204787373 C e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=15651.000000 s hg38.chr3_KI270934v1_alt 80545 20 + 163458 AAGTCAGGGCAGGAGGACTG s panTro5.chr3 2552358 20 - 202621043 AAGTCAGGGCAGGAGGACTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142026 20 - 190779 AAGTCAGGGCAGGAGGACTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868681 20 - 123690457 GAGTTAGGGCAGGGGGACCG i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91382857 20 + 91754291 GAGTTAGGGCAGGGGGAGTG i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178198 8 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e manLeu1.NW_012102020v1 1453323 28 + 1977891 I e cerAty1.NW_012004056v1 16414142 0 - 16847902 C e macFas5.chr2 192438308 19 - 192460366 T e rheMac8.chr2 2372357 0 - 204787373 C e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=31344.000000 s hg38.chr3_KI270934v1_alt 80565 28 + 163458 GTCAGAGAGGAGTTAGGGCAGGAAG-CCT s panTro5.chr3 2552378 28 - 202621043 GTCAGAGAGGAGTTAGGGCAGGAGG-CCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142046 28 - 190779 GTCAGAGAGGAGTTAGGGCAGGAGG-CCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868701 28 - 123690457 GTCAGGGAGGAGTTAGGGCAGGAGG-CCA i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91382877 29 + 91754291 GTCAGCAAGGAGTTAGGGCAGGGGGACCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453351 29 + 1977891 gtcagggaggagttagggcagggggaccg i manLeu1.NW_012102020v1 I 28 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178198 8 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223754 8 + 608964 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e cerAty1.NW_012004056v1 16414142 0 - 16847902 C e macFas5.chr2 192438308 19 - 192460366 T e rheMac8.chr2 2372357 0 - 204787373 C e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=5195.000000 s hg38.chr3_KI270934v1_alt 80593 4 + 163458 GTCT s panTro5.chr3 2552406 4 - 202621043 GTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142074 4 - 190779 GTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868729 4 - 123690457 GTCA i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91382906 4 + 91754291 GTCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453380 4 + 1977891 gtcg i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 223762 4 + 608964 GTCT i otoGar3.GL873829 I 8 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178198 8 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e cerAty1.NW_012004056v1 16414142 0 - 16847902 C e macFas5.chr2 192438308 19 - 192460366 T e rheMac8.chr2 2372357 0 - 204787373 C e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=4025.000000 s hg38.chr3_KI270934v1_alt 80597 2 + 163458 GG s panTro5.chr3 2552410 2 - 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142078 2 - 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868733 2 - 123690457 GG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2372357 2 - 204787373 GG i rheMac8.chr2 C 0 C 0 s chlSab2.chr15 91382910 2 + 91754291 GC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453384 2 + 1977891 gg i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 223766 2 + 608964 GG i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178198 8 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e colAng1.NW_012118932v1 7390251 0 - 7796314 C e cerAty1.NW_012004056v1 16414142 0 - 16847902 C e macFas5.chr2 192438308 19 - 192460366 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=24504.000000 s hg38.chr3_KI270934v1_alt 80599 8 + 163458 GAGGAGTT s panTro5.chr3 2552412 8 - 202621043 GAGGAGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142080 8 - 190779 GAGGAGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868735 8 - 123690457 GAGGAGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2372359 8 - 204787373 GAGGAGTT i rheMac8.chr2 C 0 C 0 s chlSab2.chr15 91382912 8 + 91754291 GAGGAGTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453386 8 + 1977891 gaggagtt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390251 8 - 7796314 GAGGAGTT i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 223768 8 + 608964 GGAGAGTC i otoGar3.GL873829 C 0 I 4 e proCoq1.NW_012133858v1 14806845 1492 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178198 8 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e cerAty1.NW_012004056v1 16414142 0 - 16847902 C e macFas5.chr2 192438308 19 - 192460366 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=18897.000000 s hg38.chr3_KI270934v1_alt 80607 5 + 163458 AGGGT s panTro5.chr3 2552420 5 - 202621043 AGGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142088 5 - 190779 AGGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868743 5 - 123690457 AGGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2372367 5 - 204787373 AGGGC i rheMac8.chr2 C 0 C 0 s chlSab2.chr15 91382920 5 + 91754291 AGGGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453394 5 + 1977891 agggc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390259 5 - 7796314 AGGGC i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 14808337 5 - 22200726 AGGGT i proCoq1.NW_012133858v1 I 1492 C 0 s otoGar3.GL873829 223780 5 + 608964 AGGGC i otoGar3.GL873829 I 4 C 0 e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34596 0 + 69927 C e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178198 8 - 19675229 T e saiBol1.JH378146 17305318 0 - 17725628 C e calJac3.chr17 73869171 0 + 74750902 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e cerAty1.NW_012004056v1 16414142 0 - 16847902 C e macFas5.chr2 192438308 19 - 192460366 T e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=59427.000000 s hg38.chr3_KI270934v1_alt 80612 7 + 163458 AGGAGGA s panTro5.chr3 2552425 7 - 202621043 AGGAGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142093 7 - 190779 AGGAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868748 7 - 123690457 AGGGGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2372372 7 - 204787373 AGGGGGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438289 7 - 192460366 AGGGGGA i macFas5.chr2 T 19 C 0 s macNem1.NW_012014355v1 19178190 7 - 19675229 AGGGGGA i macNem1.NW_012014355v1 T 8 C 0 s cerAty1.NW_012004056v1 16414142 7 - 16847902 AGGGGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91382925 7 + 91754291 AGGGGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453399 7 + 1977891 aggggga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390264 7 - 7796314 AGGGGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869171 7 + 74750902 GAGAGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305318 7 - 17725628 AAGAGGA i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 34596 7 + 69927 AAGAGGC i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14808342 7 - 22200726 GAGAGGA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 223785 7 + 608964 AAGAGGA i otoGar3.GL873829 C 0 C 0 e mm10.chr16 32803693 1023 + 98207768 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e cebCap1.NW_016107444v1 6399086 54 + 6778120 I e canFam3.chr33 2335825 2307 - 31377067 I e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=44740.000000 s hg38.chr3_KI270934v1_alt 80619 5 + 163458 CCAGT s panTro5.chr3 2552432 5 - 202621043 CCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142100 5 - 190779 CCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868755 5 - 123690457 CCAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2372379 5 - 204787373 CCAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438296 5 - 192460366 CCAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178197 5 - 19675229 CCAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16414149 5 - 16847902 CCGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91382932 5 + 91754291 CCAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453406 5 + 1977891 ccagt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390271 5 - 7796314 CCAGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869178 5 + 74750902 CCAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305325 5 - 17725628 CCAGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6399140 5 + 6778120 CCAGG i cebCap1.NW_016107444v1 I 54 C 0 s aotNan1.NW_018503669v1 34603 5 + 69927 TCAGG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14808349 5 - 22200726 CCTGT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 223792 5 + 608964 CCTGT i otoGar3.GL873829 C 0 C 0 e mm10.chr16 32803693 1023 + 98207768 I e micMur3.chr1 88402761 1634 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e canFam3.chr33 2335825 2307 - 31377067 I e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=674395.000000 s hg38.chr3_KI270934v1_alt 80624 57 + 163458 TAGGAGGCAGTGACTTAGGACTTCAGCAGTGGCACTAGAAAGGGGATGGATATGAAC s panTro5.chr3 2552437 57 - 202621043 TAGGAGGCAGTGACTTAGGACTTCAGCAGTGGCACTAGAAAGGGGATGGATATGAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142105 57 - 190779 TAGGAGGCAGTGACTTAGGACTTCAGCAGTGGCACTAGAAAGGGGATGGATATGAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868760 57 - 123690457 TAGGAGGCCATGACCTAGGACTTCAGCAGTGGGACTAGAAAGGGGATGGATATGAAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2372384 57 - 204787373 TAGGAGGCCGTGACCCAGGACTTCAGCAGCGCGACTAGAAAGGGGATGGGTATGAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438301 57 - 192460366 TAGGAGGCCGTGACCCAGGACTTCAGCAGCGCGACTAGAAAGGGGATGGGTATGAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178202 57 - 19675229 TAGGAGGCCGTGACCCAGGACTTCAGCAGCGCGACTAGAAAGGGGATGGGTATGAAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16414154 57 - 16847902 TGGGGGGCCGTCACCCAGGACTTCAACAGCGGGACTAGAAAGGGGATGGGTATGAAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91382937 57 + 91754291 TAGGAGGCCGTGACCCAGGACTTCAGCAGTGGGACTAGAAAGGGGATGGGTATGAAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453411 57 + 1977891 taggaggccgtgacccaggacttcaacagcgggactagaaaggggatgggtatgaat i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390276 57 - 7796314 TAGGAGGCTGTGACCCAGGACTTCAGCAGTGGGACTAGAAAGGGGATGGGTATGAAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869183 56 + 74750902 TAGGAGGCTGTGACCTAGGGCTTCAGCAGTGGGACTAG-AAGGGGATGGATATGAAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305330 57 - 17725628 TAGGAGGCTGTGACCTAGGACTTCAGCAGTGGGACTAGAAAGGGGATGGATATGAAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6399145 57 + 6778120 TAGGAGGCTGTGACCTAGGACTTCAGCAGTGGGACTAGAAAGGGGGTGGATATGAAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34608 56 + 69927 TAGGAGGCTGTGACCTAGGACTTCAGCAGTGGGACTAG-AAAGGGATGGATATTAAC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88404395 57 + 114275543 TAGGAGGCTGTGACCTAGGACTCAGGCAGTGGGTCTAGAAAGGGGGTGGATGTGAAC i micMur3.chr1 I 1634 I 322 s proCoq1.NW_012133858v1 14808354 57 - 22200726 TAGGAGGCTGTGACCTAGGACTGTGGCAGTGGGTCTAGAAAGAGGGTGGATGTGAAC i proCoq1.NW_012133858v1 C 0 I 53 s otoGar3.GL873829 223797 57 + 608964 TAGGAGGCCGTGACCTAGGACTTCAGCAGTGGGTTTAGAAAGATGATGGATGTGAAC i otoGar3.GL873829 C 0 C 0 e mm10.chr16 32803693 1023 + 98207768 I e dasNov3.JH569502 2718994 0 - 6579706 C e canFam3.chr33 2335825 2307 - 31377067 I e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=120685.000000 s hg38.chr3_KI270934v1_alt 80681 13 + 163458 GACATTGCAAAGT s panTro5.chr3 2552494 13 - 202621043 GACATTGCAAAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142162 13 - 190779 AACATTGCAAAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868817 13 - 123690457 AACATTGCAAAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2372441 13 - 204787373 GATATTGCAAAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438358 13 - 192460366 GATATTGCAAAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178259 13 - 19675229 GATATTGCAAAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16414211 13 - 16847902 GATATTGCAAAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91382994 13 + 91754291 GATATTGCAAAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453468 13 + 1977891 gatattgcaaagt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390333 13 - 7796314 GATATTGCAAAGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869239 13 + 74750902 GATATTACAAAGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305387 13 - 17725628 GATATTGCAGAGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6399202 13 + 6778120 GATATTGCGAAGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34664 13 + 69927 GATATTGCAAAGT i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 223854 13 + 608964 AATGCTGTGAAGT i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14808411 53 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e micMur3.chr1 88404452 322 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e canFam3.chr33 2335825 2307 - 31377067 I e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=11957.000000 s hg38.chr3_KI270934v1_alt 80694 3 + 163458 AAA- s panTro5.chr3 2552507 3 - 202621043 AAA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142175 3 - 190779 AAA- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868830 3 - 123690457 AAA- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2372454 3 - 204787373 AAA- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438371 3 - 192460366 AAA- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178272 3 - 19675229 AAA- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16414224 3 - 16847902 AAA- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91383007 3 + 91754291 AAA- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453481 3 + 1977891 aaa- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390346 3 - 7796314 AAA- i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 6399215 3 + 6778120 -AAC i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 14808411 53 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34677 0 + 69927 C e micMur3.chr1 88404452 322 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e saiBol1.JH378146 17305400 0 - 17725628 C e calJac3.chr17 73869252 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223867 0 + 608964 C e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=344252.000000 s hg38.chr3_KI270934v1_alt 80697 76 + 163458 ACTAGAGAGACggccgggcacagtggctcactcctgtaatcccagcactttgggagggcaaggcgggtggatcatg s panTro5.chr3 2552510 76 - 202621043 ACTAGAGAGACggccaggcacagtggctcactcctgtaatcccagcactttgggaggccaaggcgggtggatcatg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142178 76 - 190779 ACTAGAGAGACggccaggcacagtggctcactcctgtaatcccagcactttgggaggccaaggcgggtggatcatg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2868833 76 - 123690457 ACTAGAGAGATggccgtgcacagtggctcactcctgtaatcccagcactttgggaggccaaggtgggcagatcaca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2372457 74 - 204787373 ACTAGAGAGATGGTccgggcccgtggctcactcctgtattccccgc-ctttggga-gccaaggcaggcggatcacg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438374 76 - 192460366 ACTAGAGAGATggccgggcacagtggctcactcctgtaatcccagcactttgggaggccaaggcaggcggatcacg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178275 76 - 19675229 ACTAGAGAGATggctgggcacagtggctcactcctgtaatcccagcactttgggaggccaaggcaggtggatcagg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16414227 76 - 16847902 ACTAGAGAGATggcagggcacagtggctcactcctgtaatcccagcactttgggaggccaaggcaggcggatcacg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91383010 76 + 91754291 ACTAGAGAGATggccgggcacagtggctcactcctgtaatcccagcactttgggaggccaaggcaggtggatcacg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453484 76 + 1977891 actagagagatggccgggcacagtggctcactcctgtaatcccagcactttgggaggccaaggcaggcggatcacg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390349 76 - 7796314 AGTAGAGAGATggccgggcacagtggctcactcctataatcccagcattttgggaggccaaggcaggcggatcatg i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14808411 53 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34677 0 + 69927 C e micMur3.chr1 88404452 322 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e saiBol1.JH378146 17305400 0 - 17725628 C e calJac3.chr17 73869252 0 + 74750902 C e cebCap1.NW_016107444v1 6399218 0 + 6778120 C e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223867 0 + 608964 C e gorGor5.CYUI01000576v1 96167 0 - 106623 C a score=246587.000000 s hg38.chr3_KI270934v1_alt 80773 41 + 163458 aggtcaggagatcgagaccagcctggccaacatggtgaaac s panTro5.chr3 2552586 41 - 202621043 aggtcaggagatcgagaccagcctggccaacatggtgaaac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142254 41 - 190779 aggtcaggagatcgagaccagcctggccaacatggtgaaac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 96167 40 - 106623 aggtcaggagattgagaccagcctggccaacatggtg-aac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2868909 41 - 123690457 aggtcaggagatcgagaccagcctggccaacatggtgaaac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2372531 41 - 204787373 aggtcaggagatcgagaccagcctgaccaacatggtgaaac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438450 41 - 192460366 aggtcaggagatcgagaccagcctggccaacatggtgaaac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19178351 41 - 19675229 aggtcaggtgatcgagaccagcctggccaacatggtgaaac i macNem1.NW_012014355v1 C 0 M 1502 s cerAty1.NW_012004056v1 16414303 41 - 16847902 aggtcaggagatcgagaccagcctggccaacatggtgaaac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91383086 41 + 91754291 aggtcaggagatcgagaccagcctggccaacatggtgaaac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453560 41 + 1977891 aggtcaggagatcgagaccagcctggccaacatggtgaaac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390425 41 - 7796314 aggtcaggagatcgagaccagcctggacaacatggtgaaac i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14808411 53 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34677 0 + 69927 C e micMur3.chr1 88404452 322 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e saiBol1.JH378146 17305400 0 - 17725628 C e calJac3.chr17 73869252 0 + 74750902 C e cebCap1.NW_016107444v1 6399218 0 + 6778120 C e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223867 0 + 608964 C a score=264227.000000 s hg38.chr3_KI270934v1_alt 80814 71 + 163458 cctatctctact-----aaaaa-----aaaa-----aaaaaaaatagccaggcgtggtggcgggcgcctgtaatcccagctactcc s panTro5.chr3 2552627 76 - 202621043 cctatctctactttaaaaaaaa-----aaaa-----aaaaaaaatagccaggcatggtggcgggcgcctgtaatcccagctactcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142295 72 - 190779 cctatctctactt----aaaaa-----aaaa-----aaaaaaaaagaccaggcatggtggcgggcgcctgtaatcccagctactcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 96207 72 - 106623 cctatctctacta----aaaat-----caat-----taaaaaaatagccaggtgtggtggcaggcacctgtaatcccagctactcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2868950 76 - 123690457 cctatctctact-----aaaaatcaataaaa-----aaaaaaaatagccaggtgtggtggcaggcacctgtaatcccagctactcC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2372572 77 - 204787373 cgtatctctacta----aaaat-----ccagaaaaaaaaaaaaaaagccagctgtggtggcgggtgcctgtaatcccagcgactcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438491 76 - 192460366 cgtatctctacta----aaaat-----ccag-aaaaaaaaaaaaaagccagctgtggtggcgggtgcctgtaatcccagcgactcc i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16414344 72 - 16847902 cgtatctctacta----aaaat-----ccag-----aaaaaaaaaagccagctgtggtggcgggtgcctgtaatcccagcgactcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91383127 72 + 91754291 cgtatctctacta----aaaat-----ccag-----aaaaaaaaaagccagctgtggtggcgggcgcctgtaatcccagcgactcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453601 72 + 1977891 cgtatctctacta----aaaat-----ccag-----aaaaaaaaaagccagctgtggtggcgggtgcctgtaatcccagcgactgc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390466 71 - 7796314 cctatctctacta----aaaat-----ccag------aaacaaaaagccagctgtggtggcgggtgcccgtaatgccagtgactcc i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14808411 53 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34677 0 + 69927 C e micMur3.chr1 88404452 322 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17305400 0 - 17725628 C e calJac3.chr17 73869252 0 + 74750902 C e cebCap1.NW_016107444v1 6399218 0 + 6778120 C e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223867 0 + 608964 C a score=419622.000000 s hg38.chr3_KI270934v1_alt 80885 128 + 163458 agaggctgaggcaggagaatttgcttgaaccagggagtcggaagttgcagtgagctgagatcgcaccactgcactccagcctgggcaatagagtgagactccgtctcaataacaaaacaaacaaacaa s panTro5.chr3 2552703 128 - 202621043 agaggctgaggcaggagaatttgcttgaaccagggagtcggaagttgcagtgagctgagatcacaccactgcactccagcctgggcaatagagtgagactccgtctcaattacaaagcaaacaaacaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142367 128 - 190779 agaggctgaggcaggagaatttgcttgaaccagggagtcggaagttgcagtgagctgagatcacaccactgcactccagcctgggcaatagagtgagactccgtctcaattacaaagcaaacaaacaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 96279 125 - 106623 agaggctgaggcaggagaatttgcttgaaccagggagtcggaagttgcagtgagctgagatcgcaccactgcactccagcctgggc-acagagtgagactccgtctcaata--aaaacaaacagacaa i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2372649 116 - 204787373 agaggctgaggcaggagaa-tcgcttgaaccagggagttggaggttgcagtgagcagaggtcgcgctgctgcactccagcctgggcagtacagtgagactccacctcaataa-----caaac------ i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438567 121 - 192460366 agaggctgaggcaggagaa-tcacttgaaccagggagttggaggttgcagtgagcagaggttgtgctgctgcactccagcctgggcagtacagtgagactccacctcaataacaaatcaaac------ i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16414416 121 - 16847902 agaggctgaggcaggagaa-tcgcttgaaccagggagttggaggttgcagtgagcagaggtcacgccgctgcactccagcctgggcagtacagtgagactccgcctcaataacaaatcaaac------ i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91383199 120 + 91754291 agaggctgaggcaggagaa-ttgcttgaaccagggagttggaggttgcagtgagctgagatcgcgcc-ctgcactccagcctggacagtacagtgagactccgcctcaataacaaatcaaac------ i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453673 121 + 1977891 agaggctgaggcaggagaa-tcgcttgaaccagggagttggaggttgcagtgagcagaggtcacgccgctgcactccagcctgggcagtacagtgagactccgcctcaataacaaatcaaac------ i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390537 121 - 7796314 agagactgaggcaggagaa-ttgcttgaaccagggagttggaggttgcagtgagctgagatcgcaccactgcactccagcctgggcagtacagtgagactccacctcaataacaaatcaaac------ i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14808411 53 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e aotNan1.NW_018503669v1 34677 0 + 69927 C e micMur3.chr1 88404452 322 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17305400 0 - 17725628 C e calJac3.chr17 73869252 0 + 74750902 C e cebCap1.NW_016107444v1 6399218 0 + 6778120 C e canFam3.chr33 2335825 2307 - 31377067 I e otoGar3.GL873829 223867 0 + 608964 C e nomLeu3.chr11 2869026 0 - 123690457 C a score=8048.000000 s hg38.chr3_KI270934v1_alt 81013 2 + 163458 aa s panTro5.chr3 2552831 2 - 202621043 aa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142495 2 - 190779 aa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 96404 2 - 106623 aa i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2372765 1 - 204787373 -a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438688 1 - 192460366 -a i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16414537 1 - 16847902 -a i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91383319 1 + 91754291 -a i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453794 1 + 1977891 -a i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390658 1 - 7796314 -a i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869252 2 + 74750902 AA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305400 2 - 17725628 AA i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 34677 2 + 69927 AA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 223867 2 + 608964 AG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2338132 2 - 31377067 AG i canFam3.chr33 I 2307 C 0 e proCoq1.NW_012133858v1 14808411 53 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e micMur3.chr1 88404452 322 + 114275543 I e dasNov3.JH569502 2718994 0 - 6579706 C e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e cebCap1.NW_016107444v1 6399218 0 + 6778120 C e nomLeu3.chr11 2869026 0 - 123690457 C a score=10920.000000 s hg38.chr3_KI270934v1_alt 81015 1 + 163458 a s panTro5.chr3 2552833 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142497 1 - 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 96406 1 - 106623 a i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2372766 1 - 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438689 1 - 192460366 a i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16414538 1 - 16847902 a i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91383320 1 + 91754291 a i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453795 1 + 1977891 a i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390659 1 - 7796314 a i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869254 1 + 74750902 A i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305402 1 - 17725628 A i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 34679 1 + 69927 A i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 223869 1 + 608964 A i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2338134 1 - 31377067 A i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2718994 1 - 6579706 A i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14808411 53 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e micMur3.chr1 88404452 322 + 114275543 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e cebCap1.NW_016107444v1 6399218 0 + 6778120 C e nomLeu3.chr11 2869026 0 - 123690457 C a score=230613.000000 s hg38.chr3_KI270934v1_alt 81016 21 + 163458 aCTAGAGAGACTTGGCACCTT s panTro5.chr3 2552834 21 - 202621043 aCTAGAGAGACTTGGCACCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142498 21 - 190779 aCTAGAGAGACTTGGCACCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 96407 21 - 106623 aCTAGAGAGACTTGGCACCTT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2372767 21 - 204787373 aCCAGAGAGACTTGGCACCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438690 21 - 192460366 aCCAGAGAGACTTGGCACCTT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16414539 21 - 16847902 aCTAGAGAGACTTGGCACCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91383321 21 + 91754291 aCTAGAGAGACTTGGCACCTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453796 21 + 1977891 actagagagacttggcacctt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390660 21 - 7796314 aCTCGAGAGACTTGGCACCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869255 21 + 74750902 ACTAGAGAGACTTGGCAACTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305403 21 - 17725628 ACTAGAGAGACTTGGCAACTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6399218 21 + 6778120 ACTAGAGAGACTTGGCAACTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34680 21 + 69927 ACTAGAGAGACTTGGCAACTC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 223870 21 + 608964 ACTAGAAAGACTTGGCAACTT i otoGar3.GL873829 C 0 I 16 s canFam3.chr33 2338135 21 - 31377067 ACTAGAAAGACTTGGCACCTT i canFam3.chr33 C 0 I 17 s dasNov3.JH569502 2718995 21 - 6579706 ACGAGGAAGTCTCAGCACCTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14808411 53 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e micMur3.chr1 88404452 322 + 114275543 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e nomLeu3.chr11 2869026 0 - 123690457 C a score=603187.000000 s hg38.chr3_KI270934v1_alt 81037 55 + 163458 ----------------GCAGAGAGAAGCAAAAGATGACCCTGAGGTCTG----GAGTCCAGGAAGCC-AAGGACAG s panTro5.chr3 2552855 55 - 202621043 ----------------GCAGAGAGAAGCAAAAGATGACCCTGAGGTCTG----GAGTCCAGGAAGCC-AAGGACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142519 55 - 190779 ----------------GCAGAGAGAAGCAAAAGATGACCCTGAGGTCTG----GAGTACAGGAAGCC-AAGGACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 96428 54 - 106623 ----------------GCAGAGAGAAGC-AAAGATGACCCTGAGGTCTG----GAGTCCAGGAAGCC-AAGGACAG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2372788 54 - 204787373 ----------------GCAGAGAGAAGCAAAAGATGACCCTGAGGTCTG----GAGTCCAGGAAGTC--AGGACAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438711 54 - 192460366 ----------------GCAGAGAGAAGCAAAAGATGACCCTGAGGTCTG----GAGTCCAGGAAGTC--AGGACAG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16414560 54 - 16847902 ----------------GCAGAGAGAAGCAAAAAATGACCCCGAGGTCTG----GAGTCCAGGAAGTC--AGGACAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91383342 54 + 91754291 ----------------GCAGAGAGAAGCAAAAGATGACCCTGAGGGCTG----GAGTCCAGGAAGTC--AGGACAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453817 54 + 1977891 ----------------gcagagagaagcaaaagatgaccccgaggtctg----gagtccaggaagtc--aggacag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390681 54 - 7796314 ----------------GCAGAGAGAAGCAAAAGATGACCCTGAGGTCTG----GAGTCCAGGAAGTC--AGAACAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869276 55 + 74750902 ----------------GCAGAGAGAAGCAGAAGATGACCCTGAGGCCTG----GAGTCCAGGAAGCC-AAGGACAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305424 55 - 17725628 ----------------GCAGAGAGAAGCAAAAGATGACTCTGAGGTCTG----GAGTCCAGGAAGCC-AAGGACAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6399239 55 + 6778120 ----------------ACAGAGAGAAGCGAAAGATGACCCTGAGGTCTG----GAGTCCAGGAAGCT-AAGGACGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34701 55 + 69927 ----------------GCAGAGAGAAGCAAAAGATGACCCTGAGGTCTG----GAGTCCAGGAAGCC-AAAGACAG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14808464 55 - 22200726 ----------------GCAGAGAGAAGCAAAAGATGACCTTGAGGTTTA----GAATTCAGGAGGCT-GAGGACAG i proCoq1.NW_012133858v1 I 53 I 238 s otoGar3.GL873829 223907 59 + 608964 ----------------GCAAAGAGAAGCAAAAGATTACCCTGAGGTTTGGACTGAGTCCAGGAGGCC-AAGGACAG i otoGar3.GL873829 I 16 C 0 s canFam3.chr33 2338173 55 - 31377067 ----------------GCAGAGAGAATTAAAAGAAGATCCCGAGGCTTG----GAGTGCAGGAAGCTGAAGGGTA- i canFam3.chr33 I 17 C 0 s dasNov3.JH569502 2719016 71 - 6579706 GAAGGGGAAGGCCAGGGCAGAAAGAAGTAAAAGGTTACTCTGAGGTTTG----GAGTCCAGGAGGCTGGAGGATA- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32803693 1023 + 98207768 I e micMur3.chr1 88404452 322 + 114275543 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e nomLeu3.chr11 2869026 0 - 123690457 C a score=1590197.000000 s hg38.chr3_KI270934v1_alt 81092 197 + 163458 CAAAAGCATCC------ACAGAAACAG---------GAAAAC-GGCAGGTGTGGGAGGGAAGGTGAGAGGTTCATCAGACTCCACAG-CCCCTGGCAGC-GCCTCCTGGATCTTTGAAATCCTGTGCACCCCAGGAGA-CTCC-GGGAGGCCCATCTGAGCTCACCGGAGACAGGTCTGCCG--TCTCTCCTCTCATCACTGGGGACAGAA--AGCCTGAA s panTro5.chr3 2552910 197 - 202621043 GGAAAGCATCC------ACAGAAACAG---------GAAAAG-GGCAGGTGTGGGAGGGAAGGTGAGAGGTTCATCAGACCCCACAG-CCCCTGGCAGC-CCCTCCTGGATCTTTGAAATCCTGTGCACCCCAGGAGA-CTCC-GGGAGGCCCATCTGAGCTCACCAGAGAAAGGTCTGCCG--CCTCTCCTCTCATCACTGGGGACAGAA--AGCCTGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142574 197 - 190779 GGAAAGCATCC------ACAGAAACAG---------GAAAAG-GGCAGGTGTGGGAGGGAAGGTGAGAGGTTCATCAGACCCCACAG-CCCCTGGCAGC-CCCTCCTGGATCTTTGAAATCCTGTGCACCCCAGGAGA-CTCC-GGGAGGCCCATCTGAGCTCACCAGAGAAAGGTCTGCCG--CCTCTCTTCTCATCACTGGGGACAGAA--AGCCTGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 96482 186 - 106623 GGAAAGCATCC------ACAGAAACAG---------GAAAAG-GGCAGGTGTGGGAGGGAAGGTGAGAGG-TCATCAGAC-CCACAG--CCCTGGCAGC--CCTCCTGGATCTTTGAAAT-CTGTGCACCCCAGGAGA-CTCC-GGGAGGCCCATCTGAGCTCACCGGACA-AGGTCTGCCA-------CTTCTCATCACTGGGGACAGAA--AGCCTGAA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2372842 197 - 204787373 GGAAAGCATTC------ACAGAAACAG---------GAAAAG-GGCAGGTGTGGGAGGGAATGTGAGAGGTTCATCAGACCCCACAG-CCCCGGGCAGC-CCCTCCTGGATCTTTGAAATCCTGTGCGCCCCAGGAGA-CTCC-AGGAGGCCCATCTGAGCTCACCGGAGAAAGGTCTGCCG--CCTCTCCTTTCATCACTGGGGACAGAA--AGCCTGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438765 197 - 192460366 GGAAAGCATTC------ACAGAAACAG---------GAAAAG-GGCAGGTGTGGGAGGGAATGTGAGAGGTTCATCAGACCCCACAG-CCCCGGGCAGC-CCCTCCTGGATCTTTGAAATCCTGTGCGCCCCAGGAGA-CTCC-AGGAGGCCCATCTGAGCTCACCGGAGAAAGGTCTGCCG--CCTCTCCTTTCATCACTGGGGACAGAA--AGCCTGAA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16414614 197 - 16847902 GGAAAGCATTC------ACAGAAACGG---------GAAAAG-GGCAGGTGTGGGAGGGAATGTGAGAGGTTCATCAGACCCCACAG-CCCCTGGCAGC-CCCTCCTGGATCTTTGAAATCCTGTGCACCCCAGGAGA-CTCC-AGGAGGCCCATCTGAGCTCACCAGAGAAAGGTCTGCCG--CCTCTCCTTTCATCACTGGGGACAGAA--AGCCTGAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91383396 193 + 91754291 GGAAAGCATTC------ACAGAAACGG---------GAAAAG-GGCAGGTGTGGGAGGGAGTGTGAGAGGTTCATCAGACCCCACAG-CCCCTGGCAGC-CCCTCCTGGATCTTTGAAATCCTGTGCGCCCCAGGAGA-CTCC-AGGACGCCC----GAGCTCACCGGAAAAAGGTCTGCCG--CCTCTCCTTTCATCACTGGGGACAGAA--AGCCTGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1453871 197 + 1977891 ggaaagcattc------acagaaacgg---------gaaaag-ggcaggtgtgggagggaatgtgagaggttcaTCAGACCCCACAG-CCCCTGGCAGC-CCCTCCTGGATCTTTGAAATCCTGTGCGCCCCAGGAGA-CTCC-AGGAGGCCCATCTGAGCTCACCAGAGAAAGGTCTGCCG--CCTCTCCTTTCATCACTGGGGACAGAA--AGCCTGAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390735 203 - 7796314 GGAAAGCATTCACAGAAACAGAAACGG---------GAAACG-GGCAGGTGTGGGAGGGAATGTGAGAGGTTCATCAGACCCCACAG-GCCCTGGCAGC-CCCTCCTGGATCTTTGAAATCCTGTGCGTCCCAGGAGA-CTCC-AGGAGGCCCATCTGAGCTCACCGGGGAAAGGTCTGCCG--CCTCTCCTTTCATCACTGGGGACAGAA--AGCCTGAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869331 206 + 74750902 GGAAACCATCC------ACAGAAACAGAAAAGGGTAGAAA-G-GGTAGCTGTGGAAGGGAAAGTGATTGGTTCATCAGACCCCACAG-CCCCTGGAAGCCCCCTCCTCAATCTCGGAAATCCCATGCACCCCAGGAGA-CTGC-CAGAGGCCCATCTGGGCTCACTGGAGAAAGGTCGGCCG--CCTCTCCTTTCATTTCTGGGGAGAGGA--AGCCTGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305479 195 - 17725628 GGAAGCCATCC------ACAGAAACAG---------GCAA-G-GGCAGGTGTGGAAGGGAAAGTGATTGGTTCATCAGACCCCACAG-CCCCTGGCAGCCCCCTCCTCGATCTCAGAAATCCTGTGCACCCCAGGAGA-CTCC-CAGAGGCCCA-CTGGGCTCACTGGAGAAAGGCCGGCCG--CCTCTCCTTTCATCGCT-GGGAGAGGA--AGCCTGAA i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 6399294 196 + 6778120 GGAAGCCACCC------ACAGAAACAG---------GCAA-G-GGCAGGTGTGGAAGGGAAGGTGACTGGTTCATCAGACCGCACAG-CCCCTGGCAGCCCCCTCCTCGATCTCGGAAATCCTGTGCACCCCAGGAGA-CTCC-CAGAGGCCCATCTGGGCTCACTGGAGAAAGGTCGGCCA--CTTCTCCTTTCGTCGCT-GGGAGAGGA--AGCCTGAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34756 197 + 69927 GGAAACCAGCC------GCAGAAACAG---------GAAA-G-GGTAGGTGTGGAAGGGAAAGTGACTGGCTCATCAGACCCCGCAG-CCCCTGGCAGCCCCCTCCTCGATCTCGGAAATCCTGTGCACCTCAGGAGA-CTCC-CAGAGGCCCATCTGGGCTCACCGGAGAAAGGTCAGCTG--CCTCTCCTTTCATCGCTGGGGAGAGGA--AGCCTGAA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 223966 194 + 608964 GGAAACCATTT------GCAGAAA-GG---------AAGAGG-AGCAGGTCTGGGAGGAAAGGTGATGGGCTTACCACACCCCAAAG-TCCCTGGCGTCATCTTCCTAAAGTTTTGAAATCC--TGCACACAAGGTGACCCCC-AGGAGGCCAACCTTAGCTCACCAGAGGAAGGCCC-CTG--CCTTTCCTCTGCCCATT-GGAAGAGAA--GGGGTGGA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2338228 199 - 31377067 GGGATCTATTC------ATGGAACAGG---------AGGAGG-AGTAGGTCTGAGAGGGAAGGCGACGGGCTCAGCGGACCCCAAAGCCCCCTGGCTTCACCCTCCCGGAGCTATGAAATCCT---CACACAAGGAAA-CTCCTGGGAGGCCAGTCCCAACCCACCAGAGGAAGGTCCCCCTTCCCTCTCTTTTCA-CTCTAGGAAGAGAGGTGGGCAGG- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2719087 196 - 6579706 AGGAACCAGAA------ACAGAAACAG---------GAGAAGCAGCAGGTCTGAGGGGGAAGGAGATGGGTTTATTAGATCCCAACC-CCCCTAACATCACTCTCCTAGAGCTGTGATACCC--TGCACCTCTGGAAATCCCC-GAGAGGCCAGTTCTAGCCCTCCAGGGAAGAGCCT-CTG--CCTCTTCCTCTGC--CTGGGAAGAAAAG-GGGGTGGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14808519 238 - 22200726 I e mm10.chr16 32803693 1023 + 98207768 I e micMur3.chr1 88404452 322 + 114275543 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e nomLeu3.chr11 2869026 0 - 123690457 C a score=177729.000000 s hg38.chr3_KI270934v1_alt 81289 23 + 163458 CATGAGGCCTGGACTACGGGGCT s panTro5.chr3 2553107 23 - 202621043 CATGAGGCCTGGACTACGGGGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142771 23 - 190779 CATGAGGCCTGGACTACGGGGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 96668 23 - 106623 CATGAGGCCTGGACTACGGGACT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2373039 23 - 204787373 TATGAGGCCTGGACTACGGGGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438962 23 - 192460366 TATGAGGCCTGGACTACGGGGCT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16414811 23 - 16847902 TATGAGGCCTGGACTACGGGGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91383589 22 + 91754291 TATGAGGCCT-GACTACGGGGCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1454068 23 + 1977891 TGTGAGGCCTGGACTACGGGGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390938 23 - 7796314 TACGAGGCCTGGACTACGGGGCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869537 22 + 74750902 CATAAGGCCTGGACTACGGG-CT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305675 22 - 17725628 CATAAGGCCTGGACTACGGG-CT i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 6399490 22 + 6778120 CTCACGGCCTGGACTACGGG-CT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34953 21 + 69927 CATAAGGCCT-CACTACGGC-CT i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14808757 22 - 22200726 CATGAGGCCTGGGCTACAGGGC- i proCoq1.NW_012133858v1 I 238 C 0 s otoGar3.GL873829 224160 23 + 608964 CATGAGGCCAGGGATACAGGGCC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2338427 17 - 31377067 CGTGAGGCC------ACAGGGCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2719283 15 - 6579706 CACAAGGTCTGGGCT-------- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32803693 1023 + 98207768 I e micMur3.chr1 88404452 322 + 114275543 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e nomLeu3.chr11 2869026 0 - 123690457 C a score=1670915.000000 s hg38.chr3_KI270934v1_alt 81312 139 + 163458 CAGACCAGAATATTTCCAGACTTAAGGGC-AGTAATGTGGAGCCCAGGAAGGAATATTGAGGACAGA-GGGCACATTACTTAGCTCAA-GGGGTGCTGGgttcttattttctactttcaagaaatgtttgctatagtcactc s panTro5.chr3 2553130 139 - 202621043 CAGACCAGAATATTTCCAGACTGAAGGGC-AGTAACGTGGAGCCCAGGAAGGAATATTGAGGACAGA-GGGCACATTACTTAGCTAAA-GGGGTGCTGGGTTCTTATTTTCTACTTTCAATAAATGTTTGCTACAGTCACTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142794 139 - 190779 CAGACCAGAATATTTCCAGACTGAAGGGC-AGTAACGTGGAGCCCAGGAAGGAATATTGAGGACAGA-GGGCACATTACTTAGCTAAA-GGGGTGCTGGGTTCTTATTTTCTACTTTCAATAAATGTTTGCTACAGTCACTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 96691 139 - 106623 CAGACCAGAATATTT-CAGACTTAAGGGCAAGTAATGTGGAGCCCAGGAAGGAATATTGAGGACAGA-GGGCACATTACTTAGCTAAA-GTGGTGCTGGgttcttattttctactttcaagaaatgtttgctatagtcattg i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2373062 139 - 204787373 CAGACCAGAATATTTCCAGACTTAAGGGC-AGTAATGTGGAGCCCGGGAAGGAATATTGAGGAAAGA-GGGCACATTACTTAGCTAAA-GGGGTGCTGGgttcttattttctactttcgagaaatgtttgctatagtcattg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192438985 139 - 192460366 CAGACCAGAATATTTCCAGACTTAAGGGC-AGTAATGTGGAGCCCGGGAAGGAATATTGAGGAAAGA-GGGCACATTACTTAGCTAAA-GGGGTGCTGGgttcttattttctactttcgagaaatgtttgctatagtcattg i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16414834 139 - 16847902 CAGACCAGAATATTTCCAGGCTTAAGGGC-AGTAATGTGGAGCCCGGGAAGGAATATTGAGAAAAGA-GGGCACATTACTTAGCTAAA-GGGGTGCTGGgttcttattttctactttcgagaaatgtttgctatagtcattg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91383611 139 + 91754291 CAGACCAGAATATTTCCAGACTTAAGGGC-AGTAATGTGGAGCCCAGGAAGGAATATTGAGGAAAGA-GGGCACATTACTTACCTAAA-GGGGTGctgtgttcttattttctactttcaagaaatgtttgctatagtcattg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1454091 139 + 1977891 CAGACCAGAATATTTCCAGGCTTAAGGGC-AGTAATGTGGAGCCCGGGAAGGAATATTGAGAAAAGA-GGGCACATTACTTAGCTAAA-GGGGTGCTGGGTTCTTATTTTCTACTTTCGAGAAATGTTTGCTATAGTCATTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7390961 139 - 7796314 CAGACCAGAATATTTCCAGGCTTAAGGGC-AGTAATGTGGAGCCCAGGAAGGAATATTGAGGAAAGA-GGGCACATTACTTAGCTAAA-GGGGTGCTGGGTTCTTATTTTCTACTTTCAAGAAATGTTTGCTATAGTCATTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869559 139 + 74750902 CAGACCAGAATATTTCCGGACTTAAGGGC-GGTAATGTGGAGCCCGGGAAGGAATATTGAGGAGACA-GCACAAATTACTTAGCTAAA-GGGATGCTGGGTTTTTATTTTCTACTTTCAAGAAATGTTTGCTATAGTAATTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305697 139 - 17725628 CAGACCAGAATATTTCCAGACTTAAGGGC-AGTAATGTGGAGCCCAGGAAGGAATATTGAGGAGACA-GCACAAATTCCTTAGCTAAA-GGGATGCTGGGTTTTTATTTTCTACTTTCAAGAAATGTTTGCTATAGTAATGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6399512 139 + 6778120 CAGACCAGAATATTTCCAGACTTACGGGC-AGTAATGCGGAGCCCAGGAAGGAATGCTTAGGAGACA-ACACAAATTACTTAGCTAAA-GGGATGCTGGGTTTTTATTTTCTACTTTCAAGAAATGTTTGCTATAGTAATTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34974 139 + 69927 CAGACCAGAATATTTCCGGACATAAGGGC-AGTAATGTGGAGCCCGAGAAGGAATACTGAGAAGACG-GCACAAATTACTTAGCTAAA-GGGATGCTGGGTTTTTATTTTCTACTCTCAAGAAATGTTCGCTATAGTAATTG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88404774 140 + 114275543 CAGACCAGGAGACTTCCAGACTTATAGGC-AATAATGTGGAGCCCAGGGAGGAATTTCGAGGAGAGA-GGACAAATTACTTAGCCAAATGGGGTGCCAGGTTCTTATTTTCTACTTTTAAGAAATGTTTGCTATAGTTACTG i micMur3.chr1 I 322 C 0 s proCoq1.NW_012133858v1 14808779 136 - 22200726 CAGACCAGGAGACTTCCAGACTTCCAGGC-AGTAATGTGGAGCCCAGAGAGGAACAGT-AGGAGAAA-GGACAGATTACTTAGCCA---GGGGTGCCAGGTTCTTACTTTCTACTTTTAAGAAATGTTTGTTATAGTCACTG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 224183 138 + 608964 TAGACCAGAATACTTCTAGACTTATAGGT-AGTAACACGGGG-CCAGGGAGGAATACTGCGGAGAGA-GGACAAATTGCTTAGCCAAA-AGGGTGCCTGGTTCTTATTTTCTACTTTCGAGAAATGTTTGTTATAGTCACTA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2338444 140 - 31377067 CAGACCAGGCTATTTTGGGACTTACAGGC-AGTGATATGGTGCCTGGGAAGGAATATTGAGGAAGGATGCAGGGATCACTTAGCCAAA-GAAGTGCTAGGTTCTCATATTCCACTTTCAAGAAATGTTTGCTCTATTCATTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2719298 134 - 6579706 CAGACAGGGATATT--CGGGCTTAGCGGC-AGTGACCTGGGGCCCAGGAAGGAATAATGAGGAGAGA-G-GCACAGGACTTAGCTAAA--GGGTGCTGGGTTCTTAT-TTCCACTCTCAAGAAAATTTTCCCATGTTCACTG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32803693 1023 + 98207768 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e nomLeu3.chr11 2869026 0 - 123690457 C a score=522108.000000 s hg38.chr3_KI270934v1_alt 81451 48 + 163458 taaccaccacaaaacagtgaataataccatgagccaaatgtatg------------------tttc s panTro5.chr3 2553269 48 - 202621043 TAACCACCACAAAACAGTGAATAACACCATGAGCCAAATGCATG------------------TTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142933 48 - 190779 TAACCACCACAAAACAGTGAATAACACCATGAGCCAAATGCATG------------------TTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 96830 48 - 106623 taaccaccacaaaacagtgaataataccatgagccaaatgtatg------------------tttc i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2373201 48 - 204787373 tagccgtcacaaaacaatgaataataccgtgagccaaacgtatg------------------tttc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192439124 48 - 192460366 tagccgtcacaaaacaatgaataataccgtgagccaaacgtatg------------------tttc i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16414973 48 - 16847902 tagccgtcacaaaacaatgaataataccgtgagccaaacgtatg------------------tttc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91383750 48 + 91754291 tagccgtcacaaaacaatgaataataccacgagccaaacgtatg------------------tttc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1454230 48 + 1977891 TAGCCGTCAAAAAACAATGAATAATACCGTGAGCCAAACGTATG------------------TTTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391100 48 - 7796314 TAGCCATCACAAAACAATGAATAGTACTGTGAGCCAAACGTATG------------------TTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869698 46 + 74750902 CAACCATCACAAAACAATGAATAAAAACGTGAGCCAAAC--GTG------------------TTTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305836 46 - 17725628 CAACCATCACAAAGCAATGAATGATACCGTGAGCCAAAC--AGG------------------TTTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6399651 46 + 6778120 CAACCATCACAAAGCAATGAATAATACCGTGAGCCAAAC--ATG------------------TTTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 35113 46 + 69927 CAACCATCACAAAACAACGAATAATGCCGTGAGCCAAAC--ATG------------------TTTC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88404914 48 + 114275543 TAACCATCACAAAACAATGACAAACACTATGAGCCAAACTTAAG------------------TTTC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14808915 48 - 22200726 AAACCATCATAAAACAATGACAAATACCATGAGCCGATCTTAAG------------------TCTC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 224321 47 + 608964 TAACCATCAC-AAACAATGACTAATGCCATAAGCCAAACTTACG------------------CTTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32804716 47 + 98207768 TAATCGTCACAACACAATGAGCAATATTACGAGCCAAGTGTAT-------------------TTTT i mm10.chr16 I 1023 C 0 s canFam3.chr33 2338584 62 - 31377067 TAACCACCAC-AAACGATGA---ATTCCATGAGCCAAATTTATGTTTTTTTTGTGTGTGttttttt i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2719432 45 - 6579706 TAACCATCACAAAACAATGA---ACACCATGAGACAATATTATG------------------TTTC i dasNov3.JH569502 C 0 I 54 e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e nomLeu3.chr11 2869026 0 - 123690457 C a score=238136.000000 s hg38.chr3_KI270934v1_alt 81499 27 + 163458 acaatttgtat----------------------------------------------ggctgattctacgcac s panTro5.chr3 2553317 27 - 202621043 ACAACCTGTAA----------------------------------------------GGCTGATTCTACGCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142981 27 - 190779 ACAACCTGTAA----------------------------------------------GGCTGATTCTAGGCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 96878 27 - 106623 acaatttgcat----------------------------------------------ggctgattctacgcac i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2373249 27 - 204787373 ataatttgtat----------------------------------------------ggctgatcctatgcac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192439172 27 - 192460366 ataatttgtat----------------------------------------------ggctgatcctatgcac i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415021 27 - 16847902 ataatttgtat----------------------------------------------ggctgatcctacgcac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91383798 27 + 91754291 atcatttgtat----------------------------------------------ggccgatcctatgcac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1454278 27 + 1977891 ATAATTTTTAT----------------------------------------------GGCTGATCCTACGCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391148 27 - 7796314 ATAATTTGTAT----------------------------------------------GGCTGATCCTATGCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869744 27 + 74750902 GTAACTTGTAT----------------------------------------------CACTGATTCTACACAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305882 25 - 17725628 ATAGCT--TCT----------------------------------------------CACTGATTCGACGCAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6399697 27 + 6778120 ATAGCTTGTAT----------------------------------------------CACTGATTCTACGCAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 35159 27 + 69927 GTAACTTGCAT----------------------------------------------CACTGATTCTAGGCAC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88404962 27 + 114275543 ATGATTTTTAT----------------------------------------------GGTTGATTCTGTGCAC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14808963 27 - 22200726 ATAATTTGTAT----------------------------------------------GGTTGATTCTACGCAC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 224368 27 + 608964 ATAATTTGTAT----------------------------------------------GGTTGATTCTACACAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32804763 27 + 98207768 GTAATTTTTAT----------------------------------------------GGCTAATTCTGTGCAC i mm10.chr16 C 0 C 0 s canFam3.chr33 2338646 73 - 31377067 ttaacttatttatgatagtcacagagagagagaagcagagacataggcagagggagaagcaggctccatgcac i canFam3.chr33 C 0 I 123 e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e nomLeu3.chr11 2869026 0 - 123690457 C a score=1143813.000000 s hg38.chr3_KI270934v1_alt 81526 90 + 163458 atttaaatgtgtttatgacaattgtagatttcggttttcctctggTTAAACCAATGTGGAAGTACACAGGATGGGAGCTGAGAGACAAGC s panTro5.chr3 2553344 90 - 202621043 ATTTAAATGTGTTTATGACAATTGTAGATTTCAGTTTTGCTCTGGTTAAACCAATGTGGAAGTACACAGGATGGGAGCTGAGAGACAAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143008 90 - 190779 ATTTAAATGTGTTTATGACAATTGTAGATTTCAGTTTTGCTCTGGTTAAACCAATGTGGAAGTACACAGGATGGGAGCTGAGAGACAAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 96905 89 - 106623 atttaaatgtgtttatgacaattgtagatttcagttttgctctggTTAAACCAATGTGGAAGTACACAGGAT-GGAGCTGAGAGACAAGC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2373276 90 - 204787373 atttaaatgtgtttatgacgattGTAGATTTCAGTTTTGCTCTGGTTAAACCAATGTGGAAGTACACAGGATGGGAGCTGAGAGACAAGC i rheMac8.chr2 C 0 I 1 s macFas5.chr2 192439199 90 - 192460366 atttaaatgtgtttatgacgattgtagatttcagttttgctctggTTAAACCAATGTGGAAGTACACAGGATGGGAGCTGAGAGACAAGC i macFas5.chr2 C 0 I 1 s cerAty1.NW_012004056v1 16415048 90 - 16847902 atttaaatgtgtttatgacaattgtagatttcagttttgctctggTTAAACCAATGTGGAAGTACACAGGATGGGAGCTGAGAGACAAGC i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 91383825 90 + 91754291 atttaaatgtgtttatgacgattgtaaatttcagttttgctctggTTAAACCAATGTGGAAGTACACAGGATGGGAGCTGAGAGACAAGC i chlSab2.chr15 C 0 I 1 s manLeu1.NW_012102020v1 1454305 90 + 1977891 ATTTAAATGTGTTTATGACAATTGTAGATTTCAGTTTTGCTCTGGTTAAACCAATGTGGAAGTACACAGGATGGGAGCTGAGAGACAAGC i manLeu1.NW_012102020v1 C 0 I 1 s colAng1.NW_012118932v1 7391175 90 - 7796314 ATTTAAATGTGTTTATGACAACTGTACATTTCAGTTTTGCTCCGGTTAAACCAATGTGGAAGTACACAGGATGGGAGCTGAGAGACAAGC i colAng1.NW_012118932v1 C 0 I 1 s calJac3.chr17 73869771 90 + 74750902 ATTTAAATGTGTTCATGACAGCTGTAGATTTCAGTTTTGCTCTGGCTAAACCAATGCAGAAGTACACAGGATGCGAGCTGAGAGACAAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305907 90 - 17725628 ATTTAAACGTGTTCATGACAACTGTAGATTTCAGTTTTGCTCTGGCTAAACCAATGTGAAAGTATACAGGATGTGAGCTGAGAGACAAGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6399724 90 + 6778120 ATTTAAACGTGTTCATGACAACTGTACATTTCAGTTTTGCTCTGGCTAAACCAATGTGAAAGTATACAGGATGTGAGCTGAGAGACAAGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 35186 90 + 69927 ATTTAAATGTGTTCATGACAACTGTAGATTTCAGTTTTGCTCTGGCTACACCAACGTGAAAGTATACAGGACGTGAGCTGAGAGACAAGC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88404989 90 + 114275543 ACTGATATGTGTTTACAGCAATCGCAGATTTCAGTTCCCCTCCGGTTAAACCAACGTGGAAGTGTATAGGATGGGAGCTGAGAGACAAGC i micMur3.chr1 C 0 I 566 s proCoq1.NW_012133858v1 14808990 90 - 22200726 ACTGAAATGTGTTTACAACAATTGCAGATTTCACTTCCCCTCTGGTTAAACCAACGTGGAAGTGCACGGAATGGGAGCCGAGGCACAAGC i proCoq1.NW_012133858v1 C 0 I 1 s otoGar3.GL873829 224395 90 + 608964 ACTGAAATGTATTTACAACAATTGCAGATTTCAGTTTCCCTCTGGTTAAACCGATGTGGAAGTACACAGGATGGGAGGAGAGAGACCAGC i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32804790 90 + 98207768 TTTTAAATGTGTTTACAACAATCCCAGGTTTCAGTTTTCCCCAGGCCAAGCCAATGTGGGGGCTAATAGGATGGCAGCTGAGAGACAGAT i mm10.chr16 C 0 I 1 s canFam3.chr33 2338842 90 - 31377067 ATTTAAATGTGTTTACAAAAATCACAGATTTCCATTTTCCTCTGGCTGAGCCAATGTGGAAGAACACAGAACAGAAGCCAGGAGACAAGC i canFam3.chr33 I 123 C 0 e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e nomLeu3.chr11 2869026 0 - 123690457 C a score=321473.000000 s hg38.chr3_KI270934v1_alt 81616 43 + 163458 ATCCTGGGC----CCAGCCATGCTGGCCTCAGT-GGGCCAAGCTGGGG s panTro5.chr3 2553434 43 - 202621043 ATCATGGGC----CCAGCCATGCTGGCCTCAGC-GGGCCAAGCTGGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143098 43 - 190779 ATCATGGGC----CCAGCCATGCTGGCCTCAGC-GGGCCAAGCTGGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 96994 44 - 106623 ATCCTGGGC----CCAGCCATGCTGGCCTCAGTGGGGCCAAGCTGGGG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2373367 41 - 204787373 ACCCTGG------CCAGCCGTGCTGACCTCAGT-GGACCAAGCTGGGG i rheMac8.chr2 I 1 C 0 s macFas5.chr2 192439290 41 - 192460366 ACCCTGG------CCAGCCGTGCTGACCTCAGT-GGGCCAAGCTGGGG i macFas5.chr2 I 1 C 0 s cerAty1.NW_012004056v1 16415139 41 - 16847902 ACCCTGG------CCAGCCGTGCTGACCTCAGT-GGGCCAAGCTGGGG i cerAty1.NW_012004056v1 I 1 C 0 s chlSab2.chr15 91383916 41 + 91754291 ACCCTGG------CCAGCCATGCTGACCTCAGT-GGGCCAAGCTGGGG i chlSab2.chr15 I 1 C 0 s manLeu1.NW_012102020v1 1454396 41 + 1977891 ACCCTGG------CCAGCCGTGCTGACCTCAGT-GGGGCAAGCTGGGG i manLeu1.NW_012102020v1 I 1 C 0 s colAng1.NW_012118932v1 7391266 43 - 7796314 ACCCTGGGC----CCAGCCATGCTTACCTCAGT-GGGCCAAGCTGGGG i colAng1.NW_012118932v1 I 1 C 0 s calJac3.chr17 73869861 43 + 74750902 ACACCTGGC----CCAGCAATTCTGGCCTCAGC-CAGCCACGCTGGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17305997 43 - 17725628 ACCCCTGGC----CCAGCAGTTCTGGCCTCAGC-CGGCCACGCTGGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6399814 43 + 6778120 ACCCCTGGC----CCAGCAATTCTGGCCTCAGC-TGGCCACGCTGGGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 35276 43 + 69927 ACCCCTGGC----CCAGCAATTCTGGCCTCCGC-CGGCCACGCTGGGG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14809081 43 - 22200726 GCTCTGGGC----CCAGCGACACCGGCTTCAGC-ACGCCAAGGTGGGG i proCoq1.NW_012133858v1 I 1 I 58 s otoGar3.GL873829 224486 43 + 608964 TCCCTGGGC----CCAGCAACACTGGCCTCAGC-AGGCCAACGTGAGG i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32804881 40 + 98207768 CCCCTGGGCTGGGCCAGCCATGTTGGCCCCAAC-AAACCAA------- i mm10.chr16 I 1 C 0 s canFam3.chr33 2338932 41 - 31377067 CCACCAGAT----CCAGTGATAAGGCCCTCGCT-GGCCCAGGGGGG-- i canFam3.chr33 C 0 C 0 e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e nomLeu3.chr11 2869026 0 - 123690457 C a score=522413.000000 s hg38.chr3_KI270934v1_alt 81659 61 + 163458 ACAGATGACCTCTGCTCCGTGGATCCTGCTGGCT-CAGGGTGGGGAAGGGGCCTCAGGAGAG---- s panTro5.chr3 2553477 61 - 202621043 ACAGATGACCTCTGCTCCGTGGATCCTGCTGGCT-CAGGGTGGGGAAGGGGCCTCAGGAGAG---- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143141 61 - 190779 ACAGATGACCTCTGCTCCGTGGATCCTGCTGGCT-CAGGGTGGGGAAGGGGCCTCAGGAGAG---- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97038 62 - 106623 ACAGATTACCTCTGCTCCGTGGATCCTGCTGGATGCAGGGTGGGGAAGGGGCCTCAGGAGAG---- i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2373408 61 - 204787373 ACAGATGACCTCTGCTGCGTGGATTCTGCTGGCT-CAGGGTGTGGAAGGGGCCTCAGGAGAG---- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192439331 61 - 192460366 ACAGATGACCTCTGCTGCGTGGATTCTGCTGGCT-CAGGGTGTGGAAGGGGCCTCAGGAGAG---- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415180 60 - 16847902 ACAGATGACCTCTGCTGCGTGGGTCCTGCTGGCT-CA-GGTGTGGAAGGGGCCTCAGGAGAG---- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91383957 61 + 91754291 ACAGATGACCTCTGCTGCGTGGATCCTGCTGGCT-TAGGGTGTGGAAGGGGCCTCACGAGAG---- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1454437 60 + 1977891 ACAGATGACCTCTGCTGCGTGGGTCCTGCTGGCT-CA-GGTGTGGAAGGGGCCTCAGGAGAG---- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391309 61 - 7796314 ACAGATGACCTCTGCTCCGTGGATCCTGCTGGCT-CAGGGTGTGGAAGAGGCCTCAGGAGAG---- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869904 61 + 74750902 ACGGATGACCTCTGCTCCATGGATCCTGCTGGCT-CGGTGTGCAGAAGGGGCCTCAGGAGCG---- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306040 61 - 17725628 ACAGATGACCTCTGCTCCATGGATCCTGCTGGCT-CGGGGTGGGGAAGGGGCCTCAGGAGAG---- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6399857 61 + 6778120 ACAGATGACCTCTGCTCCATGGATTCTGCTGGCT-CGGGGTGGGGAAGGGGCCTCAGGAGAG---- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 35319 61 + 69927 ACAGATGACCTCTGCTCCATGGATCCTGCTGGCT-CGGGGTGGGGAAGGGGCCTCAGGAGAG---- i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 224529 59 + 608964 -CAGATGGCCTCTGATCCACGGGTGCTGCTGGCC-CAGGGT-CGGGAGGTGACTCAGGGGAG---- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32804921 46 + 98207768 --AGGTGACCTCTGTTCCATGGGTCCTGCTGGCC-AGGGCTGGAGAAAG----------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2338973 49 - 31377067 CAGGGTGGGCTCTGCATCACGG--------GGCA---------GCGAGGAGCTTCAGGGGACCTCG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14809124 58 - 22200726 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e nomLeu3.chr11 2869026 0 - 123690457 C a score=210597.000000 s hg38.chr3_KI270934v1_alt 81720 24 + 163458 GAGTCAGGCTC--TCTTCTTTA-TTCT s panTro5.chr3 2553538 24 - 202621043 GAGTCAGGCTC--TCTTCTTGA-TTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143202 24 - 190779 GAGTCAGGCTC--TCTTCTTGA-TTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97100 26 - 106623 GAGTCAGGCTCT-TCTTCTTCATTTCC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2373469 24 - 204787373 GAGTCAGGGTC--TCTTTCTGA-TTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192439392 24 - 192460366 GAGTCAGGGTC--TCTTTCTGA-TTCC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415240 23 - 16847902 GAGTCAGGTTC--TCTTTCTGA-TT-C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91384018 24 + 91754291 GTGTCAGGGCC--TCTTCCTGA-TTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1454497 23 + 1977891 GAGTCAGGGTC--TCTTTCTGA--TCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391370 24 - 7796314 GAGTCAGGCTG--TCTTCTTGA-TTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869965 24 + 74750902 GCATCAGGCTT--TCTTCTTGA-TCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306101 24 - 17725628 GAGTCAGGCTT--TCTTCTTGA-TCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6399918 24 + 6778120 GAGTCAGGCTT--TCTTCTTGA-TCCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 35380 24 + 69927 GAGTCAGGCTT--TCTTCTTGA-TCCT i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14809182 24 - 22200726 GAGTCAGGCTC--TCTTCTTGA-TTTC i proCoq1.NW_012133858v1 I 58 C 0 s otoGar3.GL873829 224588 24 + 608964 GAGTCAGGCTC--TCTTCTTGA-TTCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32804967 23 + 98207768 -ACTCAGGCTC--TCTTCCTGA-TTCC i mm10.chr16 C 0 C 0 s canFam3.chr33 2339022 15 - 31377067 -----------GATCTTCTTGA-TCCC i canFam3.chr33 C 0 C 0 e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e nomLeu3.chr11 2869026 0 - 123690457 C a score=595801.000000 s hg38.chr3_KI270934v1_alt 81744 47 + 163458 CCTCACAGCCATGGTGAATGGCATTCCTGGGAGGCTGGTTTGGAGAA s panTro5.chr3 2553562 47 - 202621043 CCTCACAGCCATGGAGACCGGCATTCCTGGGAGGCTGGTTTGGAGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143226 47 - 190779 CCTCACAGCCATGGAGACCGGCATTCCTGGGAGGCTGGTTTGGAGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97126 47 - 106623 CCTCACAGCCATGGAGAACGGCATTCCTGGGAGGCTGGTTTGGAGAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869026 47 - 123690457 CCTTTCGACCATGGAGAACGGCATTCCGGGCAGGCTGGTTTGGAGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2373493 47 - 204787373 CCTCACGGCCATGGAGAACGGCATTCCTGGGAGGCTGGTTTGGAGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192439416 47 - 192460366 CCTCACGGCCATGGAGAACGGCATTCCTGGGAGGCTGGTTTGGAGAA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415263 47 - 16847902 CCTCACGGCCATGGAGAACGGCATTGCTGGGAGGCTGGTTTGGAGAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91384042 47 + 91754291 CCTCACGGCCATGGAGAACAGCATTCCTGGGAGGCTGGTTTGGAGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1454520 47 + 1977891 CCTCACGGCCACGGAGAAGGGAATTCCTGGGAGGCTGGTTTGGAGAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391394 47 - 7796314 CCTCACGGCCATGGAGAACGGCATTCCTGGGAGGCTGGTTTGGAGAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73869989 47 + 74750902 CTCTATGGCCATGGAGAACGGCATTCCTGGGAGGCCGGTTTGGAGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306125 47 - 17725628 CTCTATGGCCATGGAGAATGGTATTCCTGGGAGGCTGGTTTGGAGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6399942 47 + 6778120 CTCTATGGCCATGGAGAACGGCATTCCTGGGAGGCTGGTTTGGAGAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 35404 47 + 69927 CTCTACGGCCATGGAGAACGGCATTCCTGGGAGGCTGGTTTGGAGAA i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14809206 47 - 22200726 CTTCACGGCCACGGAGAGCGGCATTCCTGGGAGGCTGGTCTGGAGAA i proCoq1.NW_012133858v1 C 0 I 394 s otoGar3.GL873829 224612 47 + 608964 CTTCACAGCCATGGACAGGGGCATTCCTGGGAGGCTGCGTTGGAGAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32804990 44 + 98207768 CTTCATAGTCACCGAGAGTGGCCTTCTGGAGAGGCTG---TGGAGGA i mm10.chr16 C 0 C 0 s canFam3.chr33 2339037 47 - 31377067 CTTCATGGAGATGGAGAGGGGCAGCCCTGGGAGGCTGGCTTGGAGAA i canFam3.chr33 C 0 C 0 e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M a score=369201.000000 s hg38.chr3_KI270934v1_alt 81791 49 + 163458 CTCGCTGAACCTAAGTGAGCAGGAAGTGAAGGTC--------TG-----TTCCCACCTGTG-C s panTro5.chr3 2553609 48 - 202621043 CTCGCTGAACCTAAGTAAGCAGGAAGTAAAGCTC--------TG-----TTCCCACCTG-G-C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143273 48 - 190779 CTCGCTGAACCTAAGTAAGCAGGAAGTAAAGGTC--------TG-----TTCCCACCTG-G-C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97173 50 - 106623 CTCGCTGAACCTAAGTGAGCAGGAAGTGAAGGTC--------CTG---CTTCCCACCTG-T-G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869073 49 - 123690457 GTCGCTGAACCTAAGTGAGCAGGAAGTGAAGGTC--------TA-----TTCCCACCTGTG-C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2373540 49 - 204787373 GCCGCTGAACCTAAGTGAGCAGGAAGTGAAGGTC--------TG-----TTCCCACCTGTG-C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192439463 49 - 192460366 GCCGCTGAACCTAAGTGAGCAGGAAGTGAAGGTC--------TG-----TTCCCACCTGTG-C i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415310 49 - 16847902 GCCGCTGAACCTAAGTGAGCGGGAAGTGAAGGTC--------TG-----TTCCCACCTGTG-C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91384089 49 + 91754291 GCCGCTGAACCTAAGTGAGCAGGAAGTGAAGGTC--------TG-----TTCCCACCTGTG-C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1454567 49 + 1977891 GCCGCTGAACCTAAGTGAGTGGGAAGTGAAGGTC--------TG-----TTCCCACCTGTG-C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391441 49 - 7796314 ACCGCTGAACCTAAGTGCGCAGGAAGTGAAGGTC--------TG-----TTCCCACCTGTG-C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73870036 48 + 74750902 GCCGCTGAACCTAAGTGAGCAGGAAGCGAAGTTC--------TC-----TTCCCACCTGTG-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306172 48 - 17725628 GCCGCTGAACCTAAGAGAGCAGGAAGTGAAGCTC--------TG-----TTCCCACCTGTG-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6399989 49 + 6778120 GCCACTGAACCTAAGAGAGCAGGAAGCGAAGTTC--------TG-----TTCCCACCTGTGC- i cebCap1.NW_016107444v1 C 0 I 65 s aotNan1.NW_018503669v1 35451 48 + 69927 GCTGGTGAACCTAAGTGAGCAGGAAGCAACGTTC--------TG-----TTCCCACCTGTG-- i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 224659 39 + 608964 GCTGCTGGACCT--GTGAGCAGAGAGTAAAGGCC--------TG-----TTCCC--------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32805034 46 + 98207768 GCTGCAGAACCTGA-----CAAGCAACAAACCTCATCCAAGTTG-----CTGACAT------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2339084 54 - 31377067 GCTGGTGGACCTAAGCGGGCAGAAAAGAAAAGGC--------TGTATCTTTCCAGCTTATT-T i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M a score=194933.000000 s hg38.chr3_KI270934v1_alt 81840 26 + 163458 CTGTGTT--CCCAGATAGCAGCTGCCTC s panTro5.chr3 2553657 26 - 202621043 CTGTGTT--CCCAGATAGCAGCTGCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143321 26 - 190779 CTGTGTT--CCCAGATAGCAGCTGCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97223 28 - 106623 CTGTGTTCCCCCAGATAGCAGCTGCCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869122 26 - 123690457 CTGTGTT--CCCAGATAGCAGCTGCCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2373589 26 - 204787373 CTGTGTT--CCCAGCTAGCAGCTGCCTC i rheMac8.chr2 C 0 I 3 s macFas5.chr2 192439512 26 - 192460366 CTGTGTT--CCCAGCTAGCAGCTGCCTC i macFas5.chr2 C 0 I 3 s cerAty1.NW_012004056v1 16415359 26 - 16847902 CTGTGTT--CCCAACTAGCAGCTGCCTC i cerAty1.NW_012004056v1 C 0 I 3 s chlSab2.chr15 91384138 26 + 91754291 CTGTGTT--CCCAACTAGCAGCTGCCTC i chlSab2.chr15 C 0 I 1085 s manLeu1.NW_012102020v1 1454616 26 + 1977891 CTGTGTT--CCCAACTAGCAGCTGCCCC i manLeu1.NW_012102020v1 C 0 I 3 s colAng1.NW_012118932v1 7391490 26 - 7796314 CTGTGTT--CCCAAATAGCAGCTGCCTC i colAng1.NW_012118932v1 C 0 I 3 s calJac3.chr17 73870084 26 + 74750902 CTGTGTT--TCCAAATCACAGCTGCCTC i calJac3.chr17 C 0 I 2 s saiBol1.JH378146 17306220 26 - 17725628 CTGTGTT--TCCAAACCACAGCTGCCTC i saiBol1.JH378146 C 0 I 2 s aotNan1.NW_018503669v1 35499 26 + 69927 CTGTGTT--TCCAAATCACAGCTGCCTC i aotNan1.NW_018503669v1 C 0 I 122 s otoGar3.GL873829 224698 4 + 608964 ------------------------TCTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32805080 26 + 98207768 CTGTGGT--CTCATACTCTAAGCATCTC i mm10.chr16 C 0 C 0 s canFam3.chr33 2339138 26 - 31377067 TCATGTC--CCCAAATGACAGCTATGTC i canFam3.chr33 C 0 I 32 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e cebCap1.NW_016107444v1 6400038 65 + 6778120 I a score=40372.000000 s hg38.chr3_KI270934v1_alt 81866 18 + 163458 CAGG--AGACTCACCAGGAG s panTro5.chr3 2553683 18 - 202621043 CGGG--TGACTCACCAGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143347 18 - 190779 CGGG--TGACTCACCAGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97251 18 - 106623 CGGG--CGACTCACCAGGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869148 18 - 123690457 GTGG--TGACTCACCAGAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2373618 18 - 204787373 GCGT--ACACTCACCAGGAG i rheMac8.chr2 I 3 C 0 s macFas5.chr2 192439541 18 - 192460366 GCGT--ACACTCACCAGGAG i macFas5.chr2 I 3 I 130 s cerAty1.NW_012004056v1 16415388 18 - 16847902 GCGT--ACACTCACCAGGAG i cerAty1.NW_012004056v1 I 3 C 0 s manLeu1.NW_012102020v1 1454645 18 + 1977891 GCGT--ACACTCACCAGGAG i manLeu1.NW_012102020v1 I 3 C 0 s colAng1.NW_012118932v1 7391519 17 - 7796314 GCCA--ACATTCA-CAGGAG i colAng1.NW_012118932v1 I 3 C 0 s calJac3.chr17 73870112 19 + 74750902 GGGGA-ACAGTCACCAGGAG i calJac3.chr17 I 2 C 0 s saiBol1.JH378146 17306248 18 - 17725628 GGGG--ACACTCACCAGGAG i saiBol1.JH378146 I 2 C 0 s otoGar3.GL873829 224702 13 + 608964 ----CAGCGTACACAAg--- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32805106 15 + 98207768 -----TTGGGCCAGCAAGAG i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 1085 + 91754291 I a score=162679.000000 s hg38.chr3_KI270934v1_alt 81884 32 + 163458 CCAGGTCC-CTCCATACCTGATCTCAATTAACT s panTro5.chr3 2553701 32 - 202621043 CCAGGTCC-CTCCATATCTGATCTCAATTAACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143365 32 - 190779 CCAGGTCC-CTCCATATCTGATCTCAATTAACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97269 28 - 106623 CCACGTCC-CTCCATATCTCATCTCAGT----T i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869166 32 - 123690457 CCAGGTCC-CTCCATACCTCATCTCAATTAACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2373636 32 - 204787373 CCACGTCC-CTCCCCACCTGATCTCAATTAATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192439689 32 - 192460366 CCACGTCC-CTCCCTACCTGATCTCAATTAATT i macFas5.chr2 I 130 C 0 s cerAty1.NW_012004056v1 16415406 32 - 16847902 CCACGTCC-CTCCCTACCTGATCTCAATTAATT i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1454663 31 + 1977891 CCACGTCC-CTCCCTACCTGATCTCAA-TAATT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391536 32 - 7796314 CCACGCCC-CTCCCCACCTGATTTCAATTAATT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73870131 33 + 74750902 CCAGGCCCTCTCCACGTCTGATCTCAATCAATC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306266 33 - 17725628 CCAGGCCCCCTCCACGCCTGACCTCAATCAATC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 224715 33 + 608964 ccaggccctctccacacctgatctcaattaatt i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32805121 31 + 98207768 -CAATGGT-CTCCATGCTTGCTTTCAATGAGTT i mm10.chr16 C 0 I 1020 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 1085 + 91754291 I a score=6631.000000 s hg38.chr3_KI270934v1_alt 81916 8 + 163458 --------------CACTCACC s panTro5.chr3 2553733 8 - 202621043 --------------CACTCGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143397 8 - 190779 --------------CACTCGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97297 8 - 106623 --------------CACTCACC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869198 8 - 123690457 --------------CACTCCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2373668 7 - 204787373 --------------CACTGA-C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192439721 7 - 192460366 --------------CACTCA-C i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415438 7 - 16847902 --------------CACTCA-C i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1454694 7 + 1977891 --------------CACTGA-C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391568 4 - 7796314 --------------CAC----C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73870164 22 + 74750902 CTCCCTCGTGGGGCCGCTCACC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306299 22 - 17725628 CTCCCTCGTGGGGACACTCACC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 224748 6 + 608964 ----------------ctcacc i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 1085 + 91754291 I a score=98450.000000 s hg38.chr3_KI270934v1_alt 81924 24 + 163458 AGGAGCCAGGTC-CCTCCAT--ACCTG s panTro5.chr3 2553741 24 - 202621043 AGGAGCCAGGTC-CCTCCAC--ACCTG i panTro5.chr3 C 0 I 561 s panPan2.chrUn_NW_014024201v1 143405 24 - 190779 AGGAGCCAGGTC-CCTCCAC--ACCTG i panPan2.chrUn_NW_014024201v1 C 0 I 46 s gorGor5.CYUI01000576v1 97305 24 - 106623 AGGAGCCACGTC-CGTCCAC--ACCGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869206 24 - 123690457 AGGAGCCAGGTC-CCTCCAT--ACCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2373675 26 - 204787373 AGGAGCCACGTC-CCTCCCTACACCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192439728 24 - 192460366 CAGAGCCACGTC-CCTCCCT--ACCTG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415445 24 - 16847902 CAGAGCCACGTC-CCTCCCT--ACCTG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1454701 24 + 1977891 AGGAGCCACGCC-CCTCCCC--ACCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391572 24 - 7796314 AGGAGCCACGCC-CCTCCCC--ACCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73870186 25 + 74750902 AGGAGCCAGGCCCTCTCCAC--GCCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306321 25 - 17725628 AGGAGCCAGGCCTCCTCCAC--GCCTG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e chlSab2.chr15 91384164 1085 + 91754291 I a score=72786.000000 s hg38.chr3_KI270934v1_alt 81948 16 + 163458 ACCTCAATTAACTCAC s panTro5.chr3 2554326 16 - 202621043 ATCTCAATTAACTCAC i panTro5.chr3 I 561 C 0 s panPan2.chrUn_NW_014024201v1 143475 16 - 190779 ATCTCAATTAACTCAC i panPan2.chrUn_NW_014024201v1 I 46 C 0 s gorGor5.CYUI01000576v1 97329 16 - 106623 GTCTCAATTAACTCAC i gorGor5.CYUI01000576v1 C 0 T 68703 s nomLeu3.chr11 2869230 16 - 123690457 ATCTCAATTTATTCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2373701 16 - 204787373 ATCTCAATTAATTCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192439752 16 - 192460366 ATCTCAATTAATTCAC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415469 16 - 16847902 ATCTCAATTAATTCAC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1454725 15 + 1977891 ATCTCAA-TAATTCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391596 16 - 7796314 ATCTCAATTAATTCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73870211 16 + 74750902 ACCTCAATCAATCCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306346 16 - 17725628 ACCTCAATCAATCCTC i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e chlSab2.chr15 91384164 1085 + 91754291 I a score=8814.000000 s hg38.chr3_KI270934v1_alt 81964 18 + 163458 --TCACCAGGAGCCAGGTCC s panTro5.chr3 2554342 18 - 202621043 --TCACCAGGATCCAGGTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143491 18 - 190779 --TCACCAGGAGCCAGGTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2869246 18 - 123690457 --TTACCAGGAGCCAGGTCC i nomLeu3.chr11 C 0 T 110 s rheMac8.chr2 2373717 17 - 204787373 --CCAC-AGGACCCACGTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192439768 17 - 192460366 --TCAC-CAGAGCCACGTCC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415485 17 - 16847902 --TGAC-AGGAGCCACGTCC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1454740 4 + 1977891 --TCAC-------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391612 17 - 7796314 --TCAC-AGGAACCACACCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73870227 11 + 74750902 CCTTGT-GGGGC-------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306362 11 - 17725628 CCTCAT-GGGGA-------- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e chlSab2.chr15 91384164 1085 + 91754291 I e gorGor5.CYUI01000576v1 97345 68703 - 106623 T a score=11753.000000 s hg38.chr3_KI270934v1_alt 81982 8 + 163458 CTCCATAC s panTro5.chr3 2554360 8 - 202621043 CTCCATAC i panTro5.chr3 C 0 T 603 s panPan2.chrUn_NW_014024201v1 143509 8 - 190779 CTCCATAC i panPan2.chrUn_NW_014024201v1 C 0 T 88 s rheMac8.chr2 2373734 8 - 204787373 CTCCCAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192439785 8 - 192460366 CTCCCTAC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415502 8 - 16847902 CTCCCTAC i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 7391629 8 - 7796314 CTCCCCAC i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306373 0 - 17725628 C e calJac3.chr17 73870238 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e manLeu1.NW_012102020v1 1454744 0 + 1977891 C e chlSab2.chr15 91384164 1085 + 91754291 I e nomLeu3.chr11 2869264 110 - 123690457 T e gorGor5.CYUI01000576v1 97345 68703 - 106623 T a score=1000.000000 s hg38.chr3_KI270934v1_alt 81990 1 + 163458 C s rheMac8.chr2 2373742 1 - 204787373 C i rheMac8.chr2 C 0 I 12 s macFas5.chr2 192439793 1 - 192460366 C i macFas5.chr2 C 0 I 12 s cerAty1.NW_012004056v1 16415510 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 I 14 s colAng1.NW_012118932v1 7391637 1 - 7796314 C i colAng1.NW_012118932v1 C 0 I 14 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306373 0 - 17725628 C e calJac3.chr17 73870238 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e manLeu1.NW_012102020v1 1454744 0 + 1977891 C e chlSab2.chr15 91384164 1085 + 91754291 I e nomLeu3.chr11 2869264 110 - 123690457 T e gorGor5.CYUI01000576v1 97345 68703 - 106623 T e panPan2.chrUn_NW_014024201v1 143517 88 - 190779 T e panTro5.chr3 2554368 603 - 202621043 T a score=1093.000000 s hg38.chr3_KI270934v1_alt 81991 2 + 163458 TC s cerAty1.NW_012004056v1 16415525 2 - 16847902 TC i cerAty1.NW_012004056v1 I 14 C 0 s colAng1.NW_012118932v1 7391652 2 - 7796314 TC i colAng1.NW_012118932v1 I 14 C 0 s calJac3.chr17 73870238 1 + 74750902 -C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306373 1 - 17725628 -C i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e manLeu1.NW_012102020v1 1454744 0 + 1977891 C e chlSab2.chr15 91384164 1085 + 91754291 I e macFas5.chr2 192439794 12 - 192460366 I e rheMac8.chr2 2373743 12 - 204787373 I e nomLeu3.chr11 2869264 110 - 123690457 T e gorGor5.CYUI01000576v1 97345 68703 - 106623 T e panPan2.chrUn_NW_014024201v1 143517 88 - 190779 T e panTro5.chr3 2554368 603 - 202621043 T a score=76554.000000 s hg38.chr3_KI270934v1_alt 81993 31 + 163458 ACTCACCAGCAGCCAGGTCC-CTCCACACCTC s gorGor5.CYUI01000576v1 28642 31 - 106623 ACTCACCAGGAGCCACGTCC-CTCCATATCTC i gorGor5.CYUI01000576v1 T 68703 C 0 s nomLeu3.chr11 2869154 31 - 123690457 ACTCACCAGAAGCCAGGTCC-CTCCATACCTC i nomLeu3.chr11 T 110 C 0 s rheMac8.chr2 2373755 30 - 204787373 ATTCA-CAGGACCCACGTCC-CTCCCTACCTG i rheMac8.chr2 I 12 C 0 s macFas5.chr2 192439806 30 - 192460366 ATTCA-CAGGAGCCACGTCT-CTCCCTACCTG i macFas5.chr2 I 12 C 0 s cerAty1.NW_012004056v1 16415527 30 - 16847902 ATTCA-CAGGAGCCACGTCC-CTCCCCACCTG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1454744 25 + 1977891 ------CAGGAGCCACGTCC-CTCCCCACCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391654 30 - 7796314 ACTCA-CAGGAGCCACGCCC-CTCCCCACCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73870239 32 + 74750902 ACTCACCAGGAGCCAGGCCCTCTCCACGCCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306374 32 - 17725628 ACTCACTAGGAGCCAGGCCCTCTCCACGCCTG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e chlSab2.chr15 91384164 1085 + 91754291 I e panPan2.chrUn_NW_014024201v1 143517 88 - 190779 T e panTro5.chr3 2554368 603 - 202621043 T a score=116593.000000 s hg38.chr3_KI270934v1_alt 82024 31 + 163458 ATCTCAATTAACT--------------CACTCACCAGGAGCCAGG s panTro5.chr3 2553765 31 - 202621043 ATCTCAATTAACT--------------CACTCACCAAGAGCCAGG i panTro5.chr3 T 603 C 0 s panPan2.chrUn_NW_014024201v1 143429 31 - 190779 ATCTCAATTAACT--------------CACTCACCAGGAGCCAGG i panPan2.chrUn_NW_014024201v1 T 88 C 0 s gorGor5.CYUI01000576v1 28673 27 - 106623 ATCTCAGT----T--------------CACTCACCAGGAGCCACG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869185 31 - 123690457 ATCTCAATTAACT--------------CACTCCCCAGGAGCCAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2373785 30 - 204787373 ATCTCAATTAATT--------------CACTCACCA-GAGCCACG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192439836 31 - 192460366 ATCTCAATTAATT--------------CACTCACCAGGAGCCACG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415557 30 - 16847902 ATCTCAATTAATT--------------CACTCACCA-GAGCCACG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1454769 30 + 1977891 ATCTCAA-TAATT--------------CACTCACCAGGAGCCACG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391684 30 - 7796314 ATCTCAATTAATT--------------CACTCACAG-GAGCCACG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73870271 45 + 74750902 ACCTCAATCAATCCTCCCTTGTGGGGCCACTCACCAGGAGCCAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306406 45 - 17725628 ATCCCTATCAATCCTCCCTCGTGGGAACATTCACCAGGAACCAGG i saiBol1.JH378146 C 0 I 1 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e chlSab2.chr15 91384164 1085 + 91754291 I a score=48418.000000 s hg38.chr3_KI270934v1_alt 82055 12 + 163458 TCCCTCCACACC s panTro5.chr3 2553796 12 - 202621043 TCCCTCCACACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143460 12 - 190779 TCCCTCCACACC i panPan2.chrUn_NW_014024201v1 C 0 T 90 s gorGor5.CYUI01000576v1 28700 12 - 106623 TCCGTCCACACC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869216 12 - 123690457 TCCCTCCATACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2373815 12 - 204787373 TCCCTCCCTACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192439867 12 - 192460366 TCCCTCCCTACC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415587 12 - 16847902 TCCCTCCCCACC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1454799 12 + 1977891 CCCCTCCCCACC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391714 12 - 7796314 CCCCTCCCCACC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17306452 12 - 17725628 CCCCTCCACGCC i saiBol1.JH378146 I 1 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e chlSab2.chr15 91384164 1085 + 91754291 I a score=52687.000000 s hg38.chr3_KI270934v1_alt 82067 16 + 163458 GGGTCTCAATTCACTC-------------- s panTro5.chr3 2553808 16 - 202621043 TGATCTCAATTAACTC-------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143382 16 - 190779 TGATCTCAATTAACTC-------------- i panPan2.chrUn_NW_014024201v1 T 90 C 0 s gorGor5.CYUI01000576v1 28712 16 - 106623 GGGTCTCAATTAACTC-------------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869228 16 - 123690457 TCATCTCAATTTATTC-------------- i nomLeu3.chr11 C 0 T 90 s rheMac8.chr2 2373827 16 - 204787373 TGATCTCAATTAATTC-------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192439879 16 - 192460366 TGATCTCAATTAATTC-------------- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415599 16 - 16847902 TGATCTCAATTAATTC-------------- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1454811 16 + 1977891 TGATCTCAATTAATTC-------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391726 16 - 7796314 TGATCTCAATTAATTC-------------- i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17306464 30 - 17725628 TGATCCCTATCAATCCTCCCTCATGGGGAC i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e chlSab2.chr15 91384164 1085 + 91754291 I a score=145993.000000 s hg38.chr3_KI270934v1_alt 82083 49 + 163458 ACTCGCCAGGAGCCAGG-TCCCTCCATACCTCATCTCAATTAACTCACTC s panTro5.chr3 2553824 49 - 202621043 ACTCACCAGGAGCCAGG-TACCTCCACACCTGATCTCAATTAACTCACTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143398 49 - 190779 ACTCGCCAGGAGCCAGG-TCCCTCCACACCTGATCTCAATTAACTCACTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28728 45 - 106623 A----CCAGGAGCCACG-TCCCTCCACACCGGGTCTCAATTAACTCATTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869154 49 - 123690457 ACTCACCAGAAGCCAGG-TCCCTCCATACCTCATCTCAATTAACTCACTC i nomLeu3.chr11 T 90 C 0 s rheMac8.chr2 2373843 45 - 204787373 ACTCA-CCAGAGCCACG-TCCCTCCCAACCTGATCTCAATTAATTCA--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192439895 48 - 192460366 ACTGA-CAGGAGCCACG-TCCCTCCCTACCTGATCTCAATTAATTCACCC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415615 47 - 16847902 ACTGA-CAGGAGCCACG-CCCCTCCCCACCTGATCTCAA-TAATTCACTC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1454827 47 + 1977891 ACTTA-CCAGAGCCACG-TCCCTCCCTACCTGATCTCAA-TAATTCACTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391742 48 - 7796314 ACTCA-CAGGAGCCATG-CCCCTCCCCACCTGATCTCAATTAATTCACTC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17306494 50 - 17725628 ACTCACTAGGAGCCAGGCCCCCTCCACGCCTGATCCCTATCAATCCTCCC i saiBol1.JH378146 C 0 I 122 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e chlSab2.chr15 91384164 1085 + 91754291 I a score=5236.000000 s hg38.chr3_KI270934v1_alt 82132 2 + 163458 AC s panTro5.chr3 2553873 2 - 202621043 AC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143447 2 - 190779 AC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28773 2 - 106623 AC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869203 2 - 123690457 CC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439943 2 - 192460366 AC i macFas5.chr2 C 0 I 123 s cerAty1.NW_012004056v1 16415662 2 - 16847902 AC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1454874 2 + 1977891 AC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391790 2 - 7796314 AC i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e chlSab2.chr15 91384164 1085 + 91754291 I e rheMac8.chr2 2373888 0 - 204787373 C a score=78387.000000 s hg38.chr3_KI270934v1_alt 82134 24 + 163458 CAGGAGCCAGGTCCCTCCACACCT s panTro5.chr3 2553875 24 - 202621043 CAGGAGCCGGGTCCCTCCACACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143449 24 - 190779 CAGGAGCCAGGTCCCTCCACACCT i panPan2.chrUn_NW_014024201v1 C 0 I 1 s gorGor5.CYUI01000576v1 28775 24 - 106623 CAGGAGCCAGGTCCCTCCATACCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869205 24 - 123690457 CAGGAGCCAGGTCCCTCCATACCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2373888 24 - 204787373 CAGGACCCATGTCCCTCCCTACCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440068 24 - 192460366 CAGGAGCCACGTCCCTCCCTACCT i macFas5.chr2 I 123 C 0 s cerAty1.NW_012004056v1 16415664 23 - 16847902 -TGGAGCCACGTCCCTTCCCACCT i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1454876 23 + 1977891 -AGGAGCCATGTCCCTCCCCACCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391792 24 - 7796314 CAGGACCTAGGTCTCTCCATACCT i colAng1.NW_012118932v1 C 0 T 178 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e chlSab2.chr15 91384164 1085 + 91754291 I a score=106281.000000 s hg38.chr3_KI270934v1_alt 82158 43 + 163458 CATCTCAATTAACTCACTCACCAGGAGACAGGTCCCTCCATAC s panTro5.chr3 2553899 43 - 202621043 GATCTCAATTAACTCACTCACCAGGAGACAGGTCCCTCCATAC i panTro5.chr3 C 0 I 471 s panPan2.chrUn_NW_014024201v1 143474 43 - 190779 GATCTCAATTAACTCACTCACCAGGAGCCAGGTCCCTCCATAC i panPan2.chrUn_NW_014024201v1 I 1 C 0 s gorGor5.CYUI01000576v1 28799 43 - 106623 CATCTCAATTAACTCAGTCACCAGGAGACAGGTCCCTCCATAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869229 43 - 123690457 CATCTCAATTTATTCACTTACCAGGAGCCAGGTCCCTCCATAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2373912 43 - 204787373 GATCTCAATTAATTCACTCACCAGGAGCCACGTCCCTCCCTAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440092 42 - 192460366 GATCTCAATTAATTCACTCACCA-GAGCCACGTCCCTCCCTAC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415687 42 - 16847902 GATCTCAATTAATTCATTCACAG-GAGCCACGTCCCTCCCTAC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1454899 42 + 1977891 GATCTCAA-TAATTCACTCACCAGGAGCCACGTCCCTCCCCAC i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I a score=54657.000000 s hg38.chr3_KI270934v1_alt 82201 25 + 163458 ATCATCTCAATTAACTCACTCACCA s panTro5.chr3 2554413 25 - 202621043 CTCATCTCAATTAACTCAGTCACCA i panTro5.chr3 I 471 C 0 s panPan2.chrUn_NW_014024201v1 143517 25 - 190779 CTGATCTCAATTAACTCACTCACCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28842 25 - 106623 TGGATCTCAATTAACTCACTCACCA i gorGor5.CYUI01000576v1 C 0 I 68481 s nomLeu3.chr11 2869272 25 - 123690457 CTCATCTCAATTAACTCACTCACCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2373955 24 - 204787373 CTGATCTCAATTAATTCACTGA-CA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440134 24 - 192460366 CTGATCTCAATTAATTCACCCA-CA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415729 24 - 16847902 CTGATCTCAA-TAATTCACTCACCA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1454941 24 + 1977891 CTGATCTCAA-TAATTCACTCACCA i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I a score=52879.000000 s hg38.chr3_KI270934v1_alt 82226 26 + 163458 GGAGCCAGGTCCCTCCAC--ACCGGGTC s panTro5.chr3 2554438 26 - 202621043 GGAGCCAGGTCCCTCCAT--AAGGGATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143542 26 - 190779 GGAGACAGGTCCCTCCAT--AATGGATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97348 26 - 106623 GGAGCCACGTCCCTCCAC--ACCGGGTC i gorGor5.CYUI01000576v1 I 68481 T 68657 s nomLeu3.chr11 2869297 25 - 123690457 GGAGCCAGGCCTCTCCAG--ACCTGGC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2373979 28 - 204787373 GGAGCCACGTCCCTCCCTACACCTGATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440158 26 - 192460366 GGAGCCACGTCTCTCCCT--ACCTGATC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415753 26 - 16847902 GGAGCCACGTCCCTCCCC--ACCTGATC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1454965 26 + 1977891 GGAGCCACGTCCCTCCCC--ACCTGATC i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I a score=22444.000000 s hg38.chr3_KI270934v1_alt 82252 14 + 163458 TCAATTCACTCACT s panTro5.chr3 2554464 14 - 202621043 TCAGTTAACTCACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143568 14 - 190779 TCAATTAACTCACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28717 12 - 106623 TCAATTAACTCA-- i gorGor5.CYUI01000576v1 T 68657 C 0 s nomLeu3.chr11 2869322 12 - 123690457 TTAATT--CTCACT i nomLeu3.chr11 C 0 T 132 s rheMac8.chr2 2374007 14 - 204787373 TCAATTAATTCACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440184 14 - 192460366 TCAATTAATTCACT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415779 13 - 16847902 TCAA-TAATTCACT i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1454991 13 + 1977891 TCAA-TAATTCACT i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I a score=53832.000000 s hg38.chr3_KI270934v1_alt 82266 23 + 163458 CACCAGGCGCCAGGTCCCTCCAC s panTro5.chr3 2554478 23 - 202621043 CCCCAGGAGCCAGGTCCCTCCAT i panTro5.chr3 C 0 T 180 s panPan2.chrUn_NW_014024201v1 143582 23 - 190779 CACCAGGAGCCAGGCCTCTCCAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28729 21 - 106623 --CCAGGAGCCACGTCCCTCCAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869202 23 - 123690457 CCCCAGGAGCCAGGTCCCTCCAT i nomLeu3.chr11 T 132 C 0 s rheMac8.chr2 2374021 22 - 204787373 CA-CAGGACCCACGTCCCTCCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440198 23 - 192460366 CACCAGGAGCCACGTCCCTCCCC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415792 23 - 16847902 CACCAGGAGCCACGTCCCTCCGC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455004 23 + 1977891 CACCAGGAGCCACGTCCCTCCCC i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I a score=21738.000000 s hg38.chr3_KI270934v1_alt 82289 8 + 163458 ACCTCATC s panTro5.chr3 2554321 8 - 202621043 ACCTGATC i panTro5.chr3 T 180 C 0 s panPan2.chrUn_NW_014024201v1 143605 8 - 190779 ACCTGATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28750 8 - 106623 ACCGGGTC i gorGor5.CYUI01000576v1 C 0 I 68617 s nomLeu3.chr11 2869225 8 - 123690457 ACCTCATC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374043 8 - 204787373 ACCTGATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440221 8 - 192460366 ACCTGATC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415815 8 - 16847902 ACCTGATC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455027 8 + 1977891 ACCTGATC i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I a score=15728.000000 s hg38.chr3_KI270934v1_alt 82297 5 + 163458 TCAAT s panTro5.chr3 2554329 5 - 202621043 TCAAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143613 5 - 190779 TCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97375 5 - 106623 TCAAT i gorGor5.CYUI01000576v1 I 68617 C 0 s nomLeu3.chr11 2869233 5 - 123690457 TCAAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374051 5 - 204787373 TCAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440229 5 - 192460366 TCAAT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16415823 5 - 16847902 TCAAT i cerAty1.NW_012004056v1 C 0 I 1803 s manLeu1.NW_012102020v1 1455035 5 + 1977891 TCAAT i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I a score=1911.000000 s hg38.chr3_KI270934v1_alt 82302 1 + 163458 T s panTro5.chr3 2554334 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143618 1 - 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97380 1 - 106623 T i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869238 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374056 1 - 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440234 1 - 192460366 T i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e manLeu1.NW_012102020v1 1455040 0 + 1977891 C e chlSab2.chr15 91384164 1085 + 91754291 I e cerAty1.NW_012004056v1 16415828 1803 - 16847902 I a score=6726.000000 s hg38.chr3_KI270934v1_alt 82303 5 + 163458 AACTC s panTro5.chr3 2554335 5 - 202621043 AACTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143619 5 - 190779 ACCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97381 5 - 106623 AACTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869239 5 - 123690457 TATTC i nomLeu3.chr11 C 0 T 90 s rheMac8.chr2 2374057 4 - 204787373 AATT- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440235 5 - 192460366 AATTC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16417631 5 - 16847902 AATTC i cerAty1.NW_012004056v1 I 1803 C 0 s manLeu1.NW_012102020v1 1455040 5 + 1977891 AATTC i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I a score=65139.000000 s hg38.chr3_KI270934v1_alt 82308 30 + 163458 ACTCACCAGG-AGCCAGGTCCCTCCATACCT s panTro5.chr3 2554340 30 - 202621043 ACTCACCAGG-ATCCAGGTCCCTCCATACCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143624 30 - 190779 ACTCACCAGT-AGCCAGGCCTCTccagacct i panPan2.chrUn_NW_014024201v1 C 0 T 90 s gorGor5.CYUI01000576v1 97386 31 - 106623 ATTCACCAGGAAGCCAGGTCCCTCCATACCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869154 30 - 123690457 ACTCACCAGA-AGCCAGGTCCCTCCATACCT i nomLeu3.chr11 T 90 C 0 s rheMac8.chr2 2374061 26 - 204787373 ---CA-CAGG-ACCCACGTCCCTCCCTACCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440240 29 - 192460366 ACCCA-CAGG-ACCCACGTCTCTCCCTACCT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16417636 30 - 16847902 ACTCACCAGG-AGCCACGTCCCTCCGCACCT i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455045 30 + 1977891 ACTCACCAGG-AGCCACGTCCCTCCCCACCT i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I a score=21262.000000 s hg38.chr3_KI270934v1_alt 82338 9 + 163458 CATCTCAAT s panTro5.chr3 2554370 9 - 202621043 GGTCTCAAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143564 9 - 190779 GATCTCAAT i panPan2.chrUn_NW_014024201v1 T 90 C 0 s gorGor5.CYUI01000576v1 97417 9 - 106623 CATCTCAAT i gorGor5.CYUI01000576v1 C 0 T 68618 s nomLeu3.chr11 2869184 9 - 123690457 CATCTCAAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374087 9 - 204787373 GATCTCAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440269 9 - 192460366 GATCTCAAT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16417666 9 - 16847902 GATCTCAAT i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455075 8 + 1977891 GATCTCAA- i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I a score=154392.000000 s hg38.chr3_KI270934v1_alt 82347 81 + 163458 TAACTCACTCACCAGGAGCCAAGTCCCTCCAAACCTGATCTCAATTCACTCACTCA----------------------------------------CCAGGAGCCAGGTCCCTCCATACCT s panTro5.chr3 2554379 81 - 202621043 TAACTCACTCACCAGGAGCCAGGTCCCTCCACACCTCATCTCAATTAACTCAGTCA----------------------------------------CCAGGAGCCAGGTCCCTCCATAAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143573 81 - 190779 TAACTCACTCACCAGGAGCCAGGCCTCTCCATACCTGATCTCAGTTACCTCACTCA----------------------------------------CCAGTAGCCAGGCCTCTccagacct i panPan2.chrUn_NW_014024201v1 C 0 T 135 s gorGor5.CYUI01000576v1 28808 81 - 106623 TAACTCAGTCACCAGGAGACAGGTCCCTCCATAATGGATCTCAATTAACTCACTCA----------------------------------------CCAGTAGCCAGGCCTCTCCAGACCT i gorGor5.CYUI01000576v1 T 68618 T 234 s nomLeu3.chr11 2869193 81 - 123690457 TAACTCACTCCCCAGGAGCCAGGTCCCTCCATACCTCATCTCAATTTATTCACTTA----------------------------------------CCAGGAGCCAGGTCCCTCCATACCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374096 75 - 204787373 TAATT----CA-CAGGACCCACGTCCCTCCCTACCTGATCTCAATTAATTCACTGA-----------------------------------------CAGGAGCCACGTCCCTCCCTACCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440278 120 - 192460366 TAATTCACCCA-CAGGACCCACGTCCCTCCCAACCTGATCTCAATTAATTCACAGGACCCACGTCCCTCCCTACCTGATCTCAATTAATTAACTCACCAGGAGCCACGTCCCTCCCTACCT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16417675 79 - 16847902 TAATTCATTCA-CAGGAGCCACGTCCCTCCCCACCTGATCTCAA-TAATTCACTCA----------------------------------------CCAGGAGCCACGTCCCTCCGCACCT i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455083 79 + 1977891 TAATTCACTGA-CAGGAGCCACGTCCCTTCCCACCTGATCTCAATTAATTCATTCA-----------------------------------------CAGGAGCCGCGTGCCTCCCTACCT i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I a score=48691.000000 s hg38.chr3_KI270934v1_alt 82428 28 + 163458 CATCTCAATTCACTCACTCACCAGGAGA s panTro5.chr3 2554460 28 - 202621043 GATCTCAGTTAACTCACTCCCCAGGAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143519 28 - 190779 GATCTCAATTAACTCACTCACCAGGAGA i panPan2.chrUn_NW_014024201v1 T 135 C 0 s nomLeu3.chr11 2869274 28 - 123690457 CATCTCAATTAACTCACTCACCAGGAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374171 27 - 204787373 GATCTCAATTAATTCACTCA-CCAGAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440398 27 - 192460366 GATCTCAATTAATTCACCCA-CAGGAGC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16417754 27 - 16847902 GATCTCAATTAATTCATTCA-CAGGAGC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455162 27 + 1977891 GATCTCAATTAATTCACTGA-CAGGAGC i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I e gorGor5.CYUI01000576v1 28889 234 - 106623 T a score=37425.000000 s hg38.chr3_KI270934v1_alt 82456 17 + 163458 CAGGTCCCTCCATACCT s panTro5.chr3 2554488 17 - 202621043 CAGGTCCCTCCATACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143547 17 - 190779 CAGGTCCCTCCATAATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28655 17 - 106623 CACGTCCCTCCATATCT i gorGor5.CYUI01000576v1 T 234 C 0 s nomLeu3.chr11 2869302 17 - 123690457 CAGGCCTCTCCAGACCT i nomLeu3.chr11 C 0 T 45 s rheMac8.chr2 2374198 17 - 204787373 CACGTCCCTCCCTACCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440425 17 - 192460366 CACGTCTCTCCCTACCT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16417781 17 - 16847902 CGCGTCCCTCCCCACCT i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455189 17 + 1977891 CACGCCCCTCCCCACCT i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I a score=95616.000000 s hg38.chr3_KI270934v1_alt 82473 47 + 163458 CATCTCAATTCACTCACTCACCAGGAGCCAAGTCCCTCCACACCGGG s panTro5.chr3 2554505 47 - 202621043 GATCTCAATTAACTCACTCACCAGGAGCCAGGTCCCTCCATAATGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143564 47 - 190779 GATCTCAATTAACTCACTCACCAGGAGCCAGGCCTCTCCATACCTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28672 43 - 106623 CATCTCAGT----TCACTCACCAGGAGCCACGTCCGTCCACACCGGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869274 47 - 123690457 CATCTCAATTAACTCACTCACCAGGAGCCAGGCCTCTCCAGACCTGG i nomLeu3.chr11 T 45 T 45 s rheMac8.chr2 2374215 46 - 204787373 GATCTCAATTAATTCACTGA-CAGGAGCCATGTCCCTCCCTACCTGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440442 46 - 192460366 GATCTCAATTAATTCACTCA-CCAGAGCCACGTCCCTCCCTACCTGA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16417798 46 - 16847902 GATCTCAATTAATTCATTCA-CAGGAGCCGCGTCCCTCCCCACCTGA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455206 45 + 1977891 GATCTCAA-TAATTCACTGA-CAGGAGCCATGTCCCTCCCCACCTGA i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I a score=41192.000000 s hg38.chr3_KI270934v1_alt 82520 15 + 163458 TCTCAATTAACTCAC s panTro5.chr3 2554552 15 - 202621043 TATCAGTTAACTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143611 15 - 190779 TCTCAGTTACCTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28715 15 - 106623 TCTCAATTAACTCAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869276 15 - 123690457 TCTCAATTAACTCAC i nomLeu3.chr11 T 45 C 0 s rheMac8.chr2 2374261 15 - 204787373 TCTCAATTAATTCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440488 15 - 192460366 TCTCAATTAATTCAC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16417844 15 - 16847902 TCTCAATTAATTCAT i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455251 15 + 1977891 TCTCAATTAATTCAT i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I a score=-4019.000000 s hg38.chr3_KI270934v1_alt 82535 4 + 163458 TCG-C s panTro5.chr3 2554567 4 - 202621043 TTA-C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143626 4 - 190779 TCA-C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2869291 4 - 123690457 TCA-C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374276 4 - 204787373 TCAC- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440503 3 - 192460366 CCA-- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16417859 3 - 16847902 TCA-- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455266 3 + 1977891 TCA-- i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I e gorGor5.CYUI01000576v1 28730 0 - 106623 C a score=48900.000000 s hg38.chr3_KI270934v1_alt 82539 19 + 163458 CAGGAGCCAGGTCCCTCCA s panTro5.chr3 2554571 19 - 202621043 CAGGAGCCAGGTCCCTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143630 19 - 190779 CAGTAGCCAGGCCTCTcca i panPan2.chrUn_NW_014024201v1 C 0 T 177 s gorGor5.CYUI01000576v1 28730 19 - 106623 CAGGAGCCACGTCCCTCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869295 19 - 123690457 CAGGAGCCAGGCCTCTCCA i nomLeu3.chr11 C 0 T 135 s rheMac8.chr2 2374280 19 - 204787373 CAGGAGCCACGTCCCTCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440506 19 - 192460366 CAGGAGCCACGTCTCTCCT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16417862 19 - 16847902 CAGGAGCCACGTCCCTCCC i cerAty1.NW_012004056v1 C 0 I 1 s manLeu1.NW_012102020v1 1455269 19 + 1977891 CAGGAGCCGCGTGCCTCCC i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I a score=4595.000000 s hg38.chr3_KI270934v1_alt 82558 3 + 163458 TAA s panTro5.chr3 2554590 3 - 202621043 TAC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 28749 3 - 106623 CAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869179 3 - 123690457 TAC i nomLeu3.chr11 T 135 C 0 s rheMac8.chr2 2374299 3 - 204787373 CAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440525 3 - 192460366 TAC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16417882 3 - 16847902 CAC i cerAty1.NW_012004056v1 I 1 C 0 s manLeu1.NW_012102020v1 1455288 3 + 1977891 TAC i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I e panPan2.chrUn_NW_014024201v1 143649 177 - 190779 T a score=1757.000000 s hg38.chr3_KI270934v1_alt 82561 1 + 163458 T s panTro5.chr3 2554593 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143472 1 - 190779 T i panPan2.chrUn_NW_014024201v1 T 177 C 0 s gorGor5.CYUI01000576v1 28752 1 - 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869182 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374302 1 - 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440528 1 - 192460366 C i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16417885 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455291 1 + 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391816 178 - 7796314 T e chlSab2.chr15 91384164 1085 + 91754291 I a score=57371.000000 s hg38.chr3_KI270934v1_alt 82562 22 + 163458 GGATCTCAATTAACTCACTCA-C s panTro5.chr3 2554594 22 - 202621043 TGATCTCAATTAACTCACTCA-C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143473 22 - 190779 GGATCTCAATTAACTCACTCA-C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28753 22 - 106623 GGGTCTCAATTAACTCATTCA-C i gorGor5.CYUI01000576v1 C 0 T 45 s nomLeu3.chr11 2869183 22 - 123690457 TCATCTCAATTAACTCACTCC-C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374303 21 - 204787373 TGATCTCAATTAATTCACCCA-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440529 22 - 192460366 TGATCTCAATTAATTCACTCAC- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16417886 21 - 16847902 TGATCTCAATTAATTCATTCA-- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455292 21 + 1977891 TGATCTCAATTAATTCACTGA-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391638 21 - 7796314 TGATCTCAATTAATTCACTCA-- i colAng1.NW_012118932v1 T 178 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e chlSab2.chr15 91384164 1085 + 91754291 I a score=132223.000000 s hg38.chr3_KI270934v1_alt 82584 40 + 163458 CAGGAGCCAGGTCCCTCCACACCTCATTTCAATTAACTCA s panTro5.chr3 2554616 40 - 202621043 CAGGATCCAGGTCCCTCCATACCGGATCTCAATTAACTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143495 40 - 190779 CAGGAGCCAGGTCCCTCCATACCTGATCTCAATTAACTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28730 40 - 106623 CAGGAGCCACGTCCCTCCACACCGGGTCTCAATTAACTCA i gorGor5.CYUI01000576v1 T 45 C 0 s nomLeu3.chr11 2869205 40 - 123690457 CAGGAGCCAGGTCCCTCCATACCTCATCTCAATTTATTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374324 40 - 204787373 CAGGAGCCACGTCTCTCCCCACCTGATCTCAATTAATTCA i rheMac8.chr2 C 0 I 184 s macFas5.chr2 192440551 40 - 192460366 CAGGAGCCACATCCCTCCCCACCTGATCTCAATTAATTCA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16417907 40 - 16847902 CAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATTCA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455313 39 + 1977891 CAGGAGCCACGTCCCTGCCCACCTGATCTCAA-TAATTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391659 40 - 7796314 CAGGAGCCACGCCCCTCCCCACCTGATCTCAATTAATTCA i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e chlSab2.chr15 91384164 1085 + 91754291 I a score=9022.000000 s hg38.chr3_KI270934v1_alt 82624 4 + 163458 GTCA s panTro5.chr3 2554656 4 - 202621043 CTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143535 4 - 190779 CTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28770 4 - 106623 TTCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869245 4 - 123690457 CTTA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440591 4 - 192460366 CCCA i macFas5.chr2 C 0 I 176 s cerAty1.NW_012004056v1 16417947 4 - 16847902 CTCA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455352 4 + 1977891 CTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391699 4 - 7796314 CTCA i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e chlSab2.chr15 91384164 1085 + 91754291 I e rheMac8.chr2 2374364 184 - 204787373 I a score=2800.000000 s hg38.chr3_KI270934v1_alt 82628 1 + 163458 C s panTro5.chr3 2554660 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143539 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28774 1 - 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869249 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16417951 1 - 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455356 1 + 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391703 1 - 7796314 C i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e chlSab2.chr15 91384164 1085 + 91754291 I e macFas5.chr2 192440595 176 - 192460366 I e rheMac8.chr2 2374364 184 - 204787373 I a score=18753.000000 s hg38.chr3_KI270934v1_alt 82629 7 + 163458 CAGGAGA s panTro5.chr3 2554661 7 - 202621043 CAGGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143540 7 - 190779 CAGGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28775 7 - 106623 CAGGAGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869250 7 - 123690457 CAGGAGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440771 7 - 192460366 CAGGAGC i macFas5.chr2 I 176 C 0 s cerAty1.NW_012004056v1 16417952 6 - 16847902 -AGGAGC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455357 7 + 1977891 CAGGAGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391704 6 - 7796314 -AGGAGC i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e chlSab2.chr15 91384164 1085 + 91754291 I e rheMac8.chr2 2374364 184 - 204787373 I a score=94993.000000 s hg38.chr3_KI270934v1_alt 82636 31 + 163458 CAGGTCCCTCCATACCTCATCTCAATTAACT s panTro5.chr3 2554668 31 - 202621043 CAGGTCCCTCCATAATGGATCTCAATTAACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143547 31 - 190779 CAGGTCCCTCCATAATGGATCTCAATTAACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28782 31 - 106623 CAGGTCCCTCCATACCTCATCTCAATTAACT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869257 31 - 123690457 CAGGTCCCTCCATACCTCATCTCAATTAACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374548 31 - 204787373 CACGTCCCTCCCTACCTGATCTCAATTAATT i rheMac8.chr2 I 184 C 0 s macFas5.chr2 192440778 31 - 192460366 CACGTCCCTCCCTACCTGATCTCAATTAATT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16417958 30 - 16847902 CACGTCCCTCCCCACCTGATCTCAA-TAATT i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455364 31 + 1977891 CACGTCCCTCCCCACGTGATCTCAATTAATT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391710 31 - 7796314 CACGCCCCTCCCCACCTGATCTCAATTAATT i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e saiBol1.JH378146 17306544 122 - 17725628 I e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e chlSab2.chr15 91384164 1085 + 91754291 I a score=28813.000000 s hg38.chr3_KI270934v1_alt 82667 17 + 163458 CACTCATCAGGAGCCAG s panTro5.chr3 2554699 17 - 202621043 CACTCACCAGGAGCCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143578 17 - 190779 CACTCACCAGGAGCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28813 17 - 106623 CAGTCACCAGGAGACAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869288 17 - 123690457 CACTCACCAGGAGCCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374579 1 - 204787373 C---------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440809 17 - 192460366 CACTGACCAGGAGCCAC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16417988 17 - 16847902 CACTCACCAGGAGCCAC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455395 1 + 1977891 C---------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391741 16 - 7796314 CACTCA-CAGGAGCCAT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17306666 17 - 17725628 CACTCACTAGGAGCCAG i saiBol1.JH378146 I 122 I 1 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e calJac3.chr17 73870316 0 + 74750902 C e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e chlSab2.chr15 91384164 1085 + 91754291 I a score=1435.000000 s hg38.chr3_KI270934v1_alt 82684 4 + 163458 TCCT- s panTro5.chr3 2554716 4 - 202621043 GCCT- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143595 4 - 190779 GCCT- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28830 4 - 106623 GTCC- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869305 4 - 123690457 GCCT- i nomLeu3.chr11 C 0 T 45 s macFas5.chr2 192440826 4 - 192460366 GTCC- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16418005 4 - 16847902 GTCC- i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 7391757 4 - 7796314 GCCC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73870316 4 + 74750902 -CCCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306684 4 - 17725628 -CCCC i saiBol1.JH378146 I 1 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e manLeu1.NW_012102020v1 1455396 0 + 1977891 C e chlSab2.chr15 91384164 1085 + 91754291 I e rheMac8.chr2 2374580 0 - 204787373 C a score=38497.000000 s hg38.chr3_KI270934v1_alt 82688 13 + 163458 CTCCATACCTGAT s panTro5.chr3 2554720 13 - 202621043 CTCCATACCTGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143599 13 - 190779 CTCCATACCTGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28834 13 - 106623 CTCCATAATGGAT i gorGor5.CYUI01000576v1 C 0 I 68625 s nomLeu3.chr11 2869264 13 - 123690457 CTCCATACCTCAT i nomLeu3.chr11 T 45 C 0 s macFas5.chr2 192440830 13 - 192460366 CTCCCTACCTGAT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16418009 13 - 16847902 CTCCCCACCTGAT i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 7391761 13 - 7796314 CTCCCCACCTGAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73870320 13 + 74750902 CTCCACGCCTGAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306688 13 - 17725628 CTCCACGCCTGAT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e manLeu1.NW_012102020v1 1455396 0 + 1977891 C e chlSab2.chr15 91384164 1085 + 91754291 I e rheMac8.chr2 2374580 0 - 204787373 C a score=56495.000000 s hg38.chr3_KI270934v1_alt 82701 26 + 163458 CTCAGTTACCT--------------CACTCACCAGTAGCC s panTro5.chr3 2554733 26 - 202621043 CTCAGTTACCT--------------CACTCACCAGTAGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143612 26 - 190779 CTCAGTTACCT--------------CACTCACCAGTAGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97472 26 - 106623 CTCAATTAACT--------------CACTCACCAGTAGCC i gorGor5.CYUI01000576v1 I 68625 C 0 s nomLeu3.chr11 2869277 26 - 123690457 CTCAATTAACT--------------CACTCACCAGGAGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374580 13 - 204787373 --------------------------ACTCA-CAGGACCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440843 25 - 192460366 CTCAATTAATT--------------CACTCA-CAGGACCT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16418022 25 - 16847902 CTCAATTAATT--------------CACTCA-CAGGACCT i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1455396 13 + 1977891 --------------------------ACTCA-CAGGACCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391774 26 - 7796314 CTCAATTAATT--------------CACTCACCAGGACCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73870333 40 + 74750902 CTCAATCAATCCTCCCTCGTGGGGCCACTAACCAGGAgcc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306701 40 - 17725628 CCCTATCAATCCTCCCTCGTGGGGACACTCACCAGGAgcc i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e chlSab2.chr15 91384164 1085 + 91754291 I a score=67589.000000 s hg38.chr3_KI270934v1_alt 82727 11 + 163458 -AGGCCTCTCCA s panTro5.chr3 2554759 11 - 202621043 -AGGCCTCTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143638 11 - 190779 -AGGCCTCTcca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97498 11 - 106623 -AGGCCTCTCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869303 11 - 123690457 -AGGCCTCTCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374593 11 - 204787373 -AGGTCTCTCCA i rheMac8.chr2 C 0 I 6 s macFas5.chr2 192440868 11 - 192460366 -AGGTCTCTCCA i macFas5.chr2 C 0 I 3 s cerAty1.NW_012004056v1 16418047 11 - 16847902 -AGGTCTCTCCA i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 91385249 11 + 91754291 -AGGTCTCTCCA i chlSab2.chr15 I 1085 I 1 s manLeu1.NW_012102020v1 1455409 11 + 1977891 -AGGTCTCTCCA i manLeu1.NW_012102020v1 C 0 I 1 s colAng1.NW_012118932v1 7391800 11 - 7796314 -AGGTCTCTCCA i colAng1.NW_012118932v1 C 0 I 1 s calJac3.chr17 73870373 12 + 74750902 aggccctctcta i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306741 12 - 17725628 aggccctctcca i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C a score=-3509.000000 s hg38.chr3_KI270934v1_alt 82738 1 + 163458 -G s panTro5.chr3 2554770 1 - 202621043 -G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143649 1 - 190779 -g i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97509 1 - 106623 -G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869314 1 - 123690457 -G i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73870385 1 + 74750902 t- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306753 1 - 17725628 t- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19178392 1502 - 19675229 M e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e colAng1.NW_012118932v1 7391811 1 - 7796314 I e manLeu1.NW_012102020v1 1455420 1 + 1977891 I e chlSab2.chr15 91385260 1 + 91754291 I e cerAty1.NW_012004056v1 16418058 1 - 16847902 I e macFas5.chr2 192440879 3 - 192460366 I e rheMac8.chr2 2374604 6 - 204787373 I a score=10175.000000 s hg38.chr3_KI270934v1_alt 82739 2 + 163458 AC s panTro5.chr3 2554771 2 - 202621043 AC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143650 2 - 190779 ac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97510 2 - 106623 AC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869315 2 - 123690457 AC i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 19179895 2 - 19675229 AC i macNem1.NW_012014355v1 M 1502 C 0 s cerAty1.NW_012004056v1 16418059 2 - 16847902 AC i cerAty1.NW_012004056v1 I 1 C 0 s chlSab2.chr15 91385261 2 + 91754291 AC i chlSab2.chr15 I 1 C 0 s manLeu1.NW_012102020v1 1455421 2 + 1977891 AC i manLeu1.NW_012102020v1 I 1 C 0 s colAng1.NW_012118932v1 7391812 2 - 7796314 AC i colAng1.NW_012118932v1 I 1 C 0 s calJac3.chr17 73870386 2 + 74750902 gc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306754 2 - 17725628 gc i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C e macFas5.chr2 192440879 3 - 192460366 I e rheMac8.chr2 2374604 6 - 204787373 I a score=230923.000000 s hg38.chr3_KI270934v1_alt 82741 40 + 163458 CTGGCTTAATTCTCACTACACttaattcaattaattctca s panTro5.chr3 2554773 40 - 202621043 CTGGCTTAATTCTCACTATACttaattcaactaattctca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143652 40 - 190779 ctggcttaattctcactatacttaattcaactaattctca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97512 40 - 106623 CTGGCTTAATTCTCACTCTACttaattcaactaattctca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869317 40 - 123690457 CTGGCTTAATTCTCACTATACttaattcaattaattctca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374610 37 - 204787373 ---GCTTAATTCTCACTATACttaattcaattaagtctca i rheMac8.chr2 I 6 C 0 s macFas5.chr2 192440882 40 - 192460366 CTGGCTTAATTCTCACTATACttaattcaattaagtctca i macFas5.chr2 I 3 C 0 s macNem1.NW_012014355v1 19179897 40 - 19675229 CTGGCTTAATTCTCACTATACttaattcaattaagtctca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16418061 40 - 16847902 TTGGCTTAATTCttactatacttaattcaattaattctca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91385263 40 + 91754291 TTGGCTTAATTCTCACTATACttaattcaattaagtctca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1455423 40 + 1977891 TTGGCTTAATTCttactatacttaattcaattaattctca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391814 40 - 7796314 CTGGCTTAATTCTCACTATACttaattcaattaattctca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73870388 20 + 74750902 --------------------ctgagctcaatcaatcctcc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306756 20 - 17725628 --------------------ctgagctcaatcaatcctcc i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e cebCap1.NW_016107444v1 6400038 65 + 6778120 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C a score=20055.000000 s hg38.chr3_KI270934v1_alt 82781 2 + 163458 ct s panTro5.chr3 2554813 2 - 202621043 ct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143692 2 - 190779 ct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97552 2 - 106623 ct i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869357 2 - 123690457 ct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374647 2 - 204787373 ct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440922 2 - 192460366 ct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19179937 2 - 19675229 ct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16418101 2 - 16847902 ct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91385303 2 + 91754291 ct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1455463 2 + 1977891 ct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391854 2 - 7796314 ct i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73870408 2 + 74750902 ct i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306776 2 - 17725628 ct i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6400103 2 + 6778120 ct i cebCap1.NW_016107444v1 I 65 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e canFam3.chr33 2339164 32 - 31377067 I e otoGar3.GL873829 224754 0 + 608964 C a score=12631.000000 s hg38.chr3_KI270934v1_alt 82783 2 + 163458 at s panTro5.chr3 2554815 2 - 202621043 ac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143694 2 - 190779 ac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97554 2 - 106623 at i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869359 2 - 123690457 at i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374649 2 - 204787373 gt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440924 2 - 192460366 gt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19179939 2 - 19675229 at i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16418103 2 - 16847902 at i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91385305 2 + 91754291 at i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1455465 2 + 1977891 at i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391856 2 - 7796314 ac i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73870410 2 + 74750902 at i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306778 2 - 17725628 at i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6400105 2 + 6778120 at i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 224754 2 + 608964 ac i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e canFam3.chr33 2339164 32 - 31377067 I a score=7279.000000 s hg38.chr3_KI270934v1_alt 82785 1 + 163458 a s panTro5.chr3 2554817 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143696 1 - 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97556 1 - 106623 a i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869361 1 - 123690457 a i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374651 1 - 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440926 1 - 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19179941 1 - 19675229 a i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16418105 1 - 16847902 a i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91385307 1 + 91754291 a i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1455467 1 + 1977891 a i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391858 1 - 7796314 a i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73870412 1 + 74750902 g i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306780 1 - 17725628 g i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6400107 1 + 6778120 g i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 224756 1 + 608964 a i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2339196 1 - 31377067 a i canFam3.chr33 I 32 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 35525 122 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I a score=2616789.000000 s hg38.chr3_KI270934v1_alt 82786 248 + 163458 gccctatcagacaaactctaggatacacatgaggatacagagtctcagaaaggctgagaaagtgg--c--ttgaggtcacctaggtggtaagtggtagagctaggagttgaaggcaag----tctgactctcaagtccacgctcgttccattgcactat-ctgcttttctTTCTCCCCAAAG-CCAC-AATATGCCACGATGCGGCCCAAGGCCTCTCCTCCAGTACCGTGCTGAGGGCTCTGAACAGATCAGGGCTGA s panTro5.chr3 2554818 248 - 202621043 gccctatcagagaaactctaggatacacatgaggaaacagagtctcagaaaggctgagaaagtgg--c--ttgaggtcacctaggtggtaagtggtagagctaggagttgaagtcatg----tatgactctcaagtgcacgctctttccattgcagtat-ctgcttttctTTCTCCCCAAAG-CCAC-AATATGCCACGATGTGGCCCAAGGCCTCTCCTCCAGCACCGTGCTGAGGGCTCTGAACAGATCAGGGCTGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143697 248 - 190779 gctctatcagagaaactctaggatacacatgaggaaacagagtctcagaaaggctgagaaagtgg--c--ttaaggtcacctaggtggtaagtggtagagctaggagttgaagtcacg----tatgactctcaagtgcacgctctttccattgcagtat-ctgcttttctTTCTCCCCAAAG-CCAC-AATATGCCACGATGCGGCCCAAGGCCTCTCCTCCAGCACCGTGCTGAGGGCTCTGAACAGATCAGGGCTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97557 250 - 106623 gccctatcagacaaactctaggatacacatgaggaaacagagtctcagaaaggctgagaaagtgg--cctttgaggtcacctaggtggtaagtggtagagctaggagttgaagtcacg----tatgactctc-agtccacgctctttccattgcagtat-ctgcttttctTTCTCCCCAAAG-CCACAAATATGCCACGATGCGGCCCAAGGCCTCTCCTCCAGTACCATGCTGAGGGCTCTGAACAGATCAGGGCTGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869362 248 - 123690457 gccctatcagacaaactctaggatacatatgaggaaacagaggctcagaaaggctgagaaagtgg--c--ttgaggtcacctaggtggtaagtggtagagctaggagttgaagtcaag----tctgactctgaagcccacgctcttttcattgcactat-ctgcttttctTTCTCCCCAAAG-CCAC-AATATGCCACAATGCAGCCCAAGGCCTCTCCTCCAGTACTGTGCTGAGGGCTCGGAACAGATCAGGGCTGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374652 247 - 204787373 gccctatcagacaagctctaggacacacatgaggaaatggaggctcagaaagactgagaaagtgg--c--ttgaggtcacctaggtggtaagtggtggagctaggagttgaagtcaag----tctgactctcaagcccatgctctttccattgcactat-ccgcttttctTTCTGCCCAAAG-CCAC-AATATGTCATGATGTGGCTCAGGG-CTCTCCTCCAGTACTGGGTTGAGGGCACTGGACAGATCAGGGCTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192440927 247 - 192460366 gccctatcagacaagctctaggacacacatgaggaaatggaggctcagaaagactgagaaagtgg--c--ttgaggtcacctaggtggtaagtggtggagctaggagttgaagtcaag----tctgactctcaagcccatgctctttccattgcactat-ccgcttttctTTCTGCCCAAAG-CCAC-AATATGCCATGATGTGGCTCAGGG-CTCTCCTCCAGTACTGGGTTGAGGGCACTGGACAGATCAGGGCTAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19179942 247 - 19675229 gccctatcagacaagctctaggacacacatgaggaaatggaggctcagaaagactgagaaagtgg--c--ttgaggtcacctaggtggtaagtggtggagctaggagttgaagtcaag----tctgactctcaagcccatgctctttccattgcactat-ccgcttttctTTCTGCCCAAAG-CCAC-AATATGCCATGATGTGGCTCAGGG-CTCTCCTCCAGTACTGGGTTGAGGGCACTGGACAGATCAGGGCTAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16418106 247 - 16847902 gccctatcagacaagctctaggatacacatgaggaaatggaggctcagaaagactgagaaagtgg--c--ttgaggtcacctaggtggtaagtagtagagctaggagttgaagtcaag----tctgactctcaagcccatgctctttccatcgtactat-ctgcttttctTTCTGCCCAAAG-CCAC-AGTATGCCATGATGCAGCCCAGGG-CTCTCCTCCAGTACTGGGTTGAGGGCACTGGACAGATCAGGGCTGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91385308 247 + 91754291 gccctatcagacaagctctaggatacacatgaggaaatggaggctcagaaagactgagaaagtgg--c--ttgaggtcacctaggtggtaagtggtagagctaggaattgaagtcaag----tctgactctcaagcccatgctctttccattgcactat-ctgcttttctTTCTGCCCAAAG-CCAC-AATATGCCACGATGCAGCCCAGGG-CTCCCCTCCAGTACTGGGTTGAGGGCACTGGACAGATCAGGACTGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1455468 247 + 1977891 gccctatcagacaagctctaggatacacatgaggaaatggaggctcagaaagactgagaaagtgg--c--ttgaggtcacctaggtggtaagtagtagagctaggagttgaagtcaag----tctgactctcaagcccatgctctttccatcgcactat-ctgcttttctTTCTGCCCAAAG-CCAC-AGTATGCCATGATGCAGCCCAGGG-CTCTCCTCCAGTACTGGGTTGAGGGCACTGGACAGATCAGGGCTGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7391859 247 - 7796314 gccctatcagacaagctctaggatacacatgaggaaatggatgctcagaaagactgagaaagtgg--c--ttgaggtcacctaggtggtaagtggtagagctaggagttgaagtcaag----tctgactctcaagcccatgctctttccattgcactat-ctgcttttctTTCTGCCCAAAG-CCAC-AATATGCCATGATGCGGCCCAGGG-CTGTCCTCCAGTACTGGGTTGAGGGCACTGGACAGATGAGGGCTGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73870413 248 + 74750902 cccctatcaggcaagctctaggagacacatgaggaaactgaggctcagaaaggctgagaaagtgg--c--ttgaggtcacccaggcagtaagcggtagagctaggagttgaactcaagtccatctgactatcaagcccaccctctttccattgcactat-ctgcttttctTTCTGCCCAAAG-TCAT-AATATGCCAGGATGTGGGCCAAGGCCTCTCCTCCAGTGCTGGGCAGAGGGCTCTGGACAGATC----TTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17306781 246 - 17725628 gccctatcaggcaagctctaggatacacatgaggaaactgaggctcagaaaggctgagaaagtgg--c--ttgaggtcacccaggcagtaagtggtagagctaggagttgaactcaaatccatctgactatcaagcccactctctttccattgcactat-ctgcttttctTTCTGCCCAAAG-CCAT-AATATGCCAGGAAGTGGGCCAAGGCCTCTCCTCCAGTGCTGGGCAGAGGGCTCTGGACAG--C----CTGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6400108 248 + 6778120 gccctatcaggcaagctctaggatacacatgaggaaactgaggctcagaaaggctgagaaagtgg--c--ttgaggtcacccaggcagtaagtggtagagccgggagttgaactcaagtctatctgactatcaatcgcactctctttccattgcattat-ctgcttttctTTCTGCCCAAAG-CCAT-AATATGCCAGGATGCGGGCCAAGGCCTCTCCTCCAGTGCTGGGCAGAGGGCTCTGGACAGCTC----TTGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 35647 248 + 69927 gccctatcaggcaagctctaggatacacatgaggaaactgaggctcagaaaggctgagaaagtgg--c--ttgaggtcacccaggcagtacgtggtagagctaggagctgaactcaagtccatctgactatcaagcccactctctttccattgcactat-ctgcttttctTTCTGCCCAAAG-CCAT-AATATGCCAGGATGCGGGCCAAGGCCTCTCCTCCAGTGCTGGGCAGAGGGCTCTGAACAGATC----TTGA i aotNan1.NW_018503669v1 I 122 C 0 s otoGar3.GL873829 224757 249 + 608964 gccctacaaggcaagttctagaatacagatgtggaagctgaggctcaaaaaaactagagtatttt--c--tcagggtcacccaggtagtaagaggtggagcccagaattgaagccagg----tctatttgaccaaaccacactgttcccattgcactgtgctgcttttctTTCTGCCCAAAG-CTGC-AATATGCTAGCAGAGGGGGCGAAGCCTCTCCTCCAGTGCTGGGGTGAGGATCCTGGACAGGTCAGGACTGG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2339197 239 - 31377067 gctctgcaaggcaagctctaggacacagatggggaaagggaagc-----------gagaaggaggtac--gtcagttcctccaggtaacacgtggtagaggtgggatctggacccagaact-ttcggctcccaagtccatgctccttccattgtcccacgttgcctttctTTCTGCCCCATGTTCAC-AAT-----AAAGTGGAGGCTGAGGCCTCCGTTCCAGTGCCGGGCAGAGAGCTCTGGACAAGCCAGGGCTGA i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I a score=49128.000000 s hg38.chr3_KI270934v1_alt 83034 4 + 163458 AGCC s panTro5.chr3 2555066 4 - 202621043 AGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143945 4 - 190779 AGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97807 4 - 106623 AGCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869610 4 - 123690457 AGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374899 4 - 204787373 AGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192441174 4 - 192460366 AGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19180189 4 - 19675229 AGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16418353 4 - 16847902 AGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91385555 4 + 91754291 AGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1455715 4 + 1977891 AGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7392106 4 - 7796314 AGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73870661 4 + 74750902 GGCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17307027 4 - 17725628 AGCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6400356 4 + 6778120 AGCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 35895 4 + 69927 AGCT i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 2339436 4 - 31377067 AGCC i canFam3.chr33 C 0 I 1 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e otoGar3.GL873829 225006 0 + 608964 C a score=3822778.000000 s hg38.chr3_KI270934v1_alt 83038 432 + 163458 AAGAtgtcatcc-----agtgcaatacccacatgacctccgtgaatatctaccctgccttaacactgtttatctttaggaagcaggatgcctgaggtccaaacttctcc----ctggtgatcaaaccagctaagactgatggaatccaagatggcagctcatttgacctctaacttcattataatctaatttccatgttaaatgacagtcccactaacaccgtaacagtc-aacaaccaacatgacaatgatggga----aaaaataacat----aaaaa--aacaaataggaaggtggcactctggttttgaaaatttctccacccagacccagaaaacacatgattcctccccttgc-ttttttcatttttatttttgtagagatgggggtgtatcactatgttgaccaggatggt-ctcgaactcctggtctc-agcaatcctctcattttg s panTro5.chr3 2555070 432 - 202621043 AAGAtgtcatcc-----agtgcaatacccacatgacctccatgcatatctaccctgccttaacactgtttatctttaggaagcaggatgcctgaggtccaaacttctcc----ctggtgatcaaaccagctaagagtgatggaatccaagatggcagctcacttgacctctaacttcattataatctaatttccatgttaaatgacagtcccactagcaccttaacagtc-aacaaccaacatgacaatgatgggg----aaaaaaaacat----aaaaa--aacaaataggaaggtggcactctggttttgaaaagttctccacccagacccagaaaacacatgattcctctccttgc-ttttttcatttttatttttgtagagatgggggtgtatcactatgttgaccaggatggt-ctcaaactcctggtctc-agcaatcctctcattttg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143949 434 - 190779 AAGAtgtcatcc-----agtgcaatacccacatgacctccatgaatatctaccctgccttaacactgtttatctttaggaagcaggatgcctgaggtccaaacttctcc----ctggtgatcaaaccagctaagactgatggaatccaagatggcagctcacttgacctctaacttcattataatctaatttccatgttaaatgacagtcccactagcaccttaacagtc-aacaaccaacatgacaatgatgggga--aaaaaaaaacat----aaaat--aacaaataggaaggtggcactctggttttgaaaagttctctacccagacccagaaaacacatgattcctctccttgc-ttttttcatttttatttttgtagagatgggggtgtatcactatgttgaccaggatggt-ctcaaactcctggtctc-agcaatcctctcattttg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 97811 438 - 106623 AAGAtgtcatcc-----agtgcaatactcacatga-ctccatgaatatcta-cctgccttaatgctgtttatctttaggaagcaggatgcctgaggtccaaacttctcc----ctggtgatcaaaccagctaagactgatggaatccaagatggcagctcagctgacctctaactttattataatctaatttccatgttaaatgacagtcccactagcaccttaacagtcaaacaaccaacatgacaatgatgggaa--aaaaaaaaaaaccataaaaaa--aacaaataggaaggtggcactctggttttgaaaagttctccacccagacccagaaaacacatgattcctccccttgc-ttttttcatttttatttttgtagagatgggggggtatcactatgttgaccaggatgttcctcgaactcctggtctc-agcaatcctctcattttg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2869614 430 - 123690457 AAGAtgtcatcc-----agtgtaatacccacatgacctccgtgaatatctaccctgccttaacactgtttatctttaggaagcaggatgcctgaggtccaaacttctcc----ctggtgatcaaaccagctaagacggatggaatccaagatggcacctcacttgacctctaacttcattatgatctaatttccatgctaaatgacagtcccactagcaccgtaacagtc-aacaaccaacatgacaatgatgaga------aaaaaccat----aaaaa--aacaaatagcaaggtggcactgtggttttgaaaagttctccacacagacccggaaaacacaggattcctccccttgc-ttttttcatttttatttttgtagagatgggggggtatcactatgttgacgacgatggt-ctcgaactcctggtctt-agcaatcctctcattttg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2374903 427 - 204787373 AAGGtgtcgtcc-----agtgtaatgcccacatgacctccatgaatacctaccctgccttaactctgtttatctttaggaaacaggatgcctgaggtccgaacttctcc----ctggtgatcaaaccagctaagactgatggaatccaagagggcagctcacttgacctctaacttcgttataatctaatttccatgctaaatggtagtcccgctagcaccataacagtc-aacaaccaccatgacaatgatggaa-----aa--aaacat----aaaa---aacaaatagaaagttggcactctggttttgaaaagttctccacccagaccgagaaaacacatgattcctccccttac-ttttttcatttttagttttgtagagatgggga-gtatcactatgttaaccaggatggt-ctcgaactcctggtctc-ggcaatcctctcatcttg i rheMac8.chr2 C 0 I 11 s macFas5.chr2 192441178 426 - 192460366 AAGAtgtcgtcc-----agtgtaatgcccacatgacctccgtgaatacctaccctgccttaactctgtttatctttaggaaacaggatgcctgaggtccgaacttctcc----ctggtgatcaaaccagctaagactgatggaatccaagatggcagctcacttgacctctaacttcgttataatctaatttccatgctaaatggtagtcccgctagcaccataacagtc-aacaaccaccatgacaatgatggaa-----aa--aaacat----aaaa---aacaaatagaaagttggcactctggttttgaaaagttctccacccagacccagaaaacacatgattcctccccttac-ttttttcatttttagttttgtagagatgggga-gtatcactatgttaaccaggatggt-ctcgaactcctggtctc-ggcaatcctctcatctt- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19180193 427 - 19675229 AAGAtgtcgtcc-----agtgtaatgcccacatgacctccatgaatacctaccctgccttaactctgtttatctttaggaaacaggatgcctgaggtccgaacttctcc----ctggtgatcaaaccagctaagactgatggaatccaagatggcagctcacttgacctctaacttcgttataatctaatttccatgctaaatggtagtcccgctagcaccataacagtc-aacaaccaccatgacaatgatggaa-----aa--aaacat----aaaa---aacaaatagaaagttggcactctggttttgaaaagttctccacccagacccagaaaacacatgattcctccccttac-ttttttcatttttagttttgtagagatgggga-gtatcactatgttaaccaggatggt-ctcgaactcctggtctc-ggcaatcctctcatcttg i macNem1.NW_012014355v1 C 0 I 11 s cerAty1.NW_012004056v1 16418357 430 - 16847902 AAGAtgtcatcc-----agtgtaatgcccacatgacctccgtgaatacctaccctgccttaactctgtttatctttaggaaacaggatacctgaggtccgaacttctcc----ctggtaatcaaaccagctaagactgatggaatccaagatggcagctcacttgacctttaacttcattataatctaatttccatgctaaataacagtcccgctagcactgtaacagtc-aacaactaccatgacaatgattaaa-----aa--aaaaaa----aaaaaacaacaaataggaagttggcactctggttttgaaaagttctccacccagacccagaaaacacatgattcctccccttgc-ttttTTCatttttgtttttgtagagacgggga-gtatcactatgttaaccaggatggt-ctcgaactcctggtctc-ggcaatcctctcatcttg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91385559 428 + 91754291 AAGAtgtcatcc-----agtgtaatgcccacataacctccgtgaatacctaccctgccttaactctgtttatctttaggaaacaggatgcctgaggtccgaacttctcc----ctggtgatcaaaccagctaagactgatggaatccaagatggcagctcacttgacctctagcttccttataatctaatttccatgctaaatagcagtcccgctagcaccataacagtc-aacaactaccatgacaatgatggga-----aaaaaaacat----aaaa---aacaaataggaagttggcactctggttttgaaaagttctccacccagacccagaaaacacatgattcctccccttgc-tcttTTCATTTTTAGttttgtagagatgggga-gtatcaccatgttaaccaggacggt-ctcgaactcctggtctc-ggcaatcctctcatctt- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1455719 428 + 1977891 AAGAtgtcatcc-----agtgtaatgcccacatgacttccgtgaatacctaccctgccttaactctgtttatctttaggaaacaggatacctgaggtccgaacttctcc----ctggtgatcaaaccagctaagactgatggactccaagatggcagctcacttgacctttaacttcattataatctaatgtccatgctaaatgacagtcccactaacactgtaacagtc-aacaaccaccatgacaatgattaaa-----aaacaaaaac----aaaa---aacaaataggaagttggcactctggttttgaaaagttctccacccagacccagaaaacacatgattcctccccttgc-ttttTTCatttttgtttttgtagagacgggga-gtatcactatgttaaccaggatggt-ctcgaactcctggtctc-ggcaatcctctcatctt- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7392110 423 - 7796314 AAGttgtcatcc-----agtgtaaggcccacatgacctccgtgaatacctaccctgccttaactctgtttatctttaggaaacaggatgcctgaggtccgaacttctcc----ctggtgatcaaaccagctaagactgatggaatccaagatggcagctcgcttgacctctaacttcattataatctaatctccatgctaaatggcagtcccgctagcaccgtaacagtc-aacaaccaccatgacaatgatggaa-----aaaaaaacat----aaaa---aacaaataggaagttggcactctggttttgaaaagttctccacccagacccagaaaacacatgatttctccccttgc-gtttTTCatttttgtttttgtagagatgggga-gtatcactatgttaaccaggatggc-ctcgaactcctggtctc-ggcaatcctctc------ i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73870665 419 + 74750902 AAGAtgttatcccgtgtaatgtaatgcctacatgaccttggtgaatatctacc-------------------ctttaggaaacaggatgcctgaggtcagaacctctccttagctggtgatcaaaccagctaagactggtggaatccaagatggcagctcacctgacctctaacttcattataatctaatttccatgctaaatcacacttccactggcaccataacagta-atcaagcaccgtgacaatgctgggg---ggaaaaaaacat----aaaaa--aacagataggaaagtggcactc-ggtttggaaaacttctccacccagacccagaaaacaca--attcctccctttgc-tttttTTatttttatttttgtagagatgagg--gtctcattacgttgaccaggctggt-ctcgaactcctggtctcaagcaatcctctcatcttg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17307031 436 - 17725628 AAGAtgttatcc-----agtgtaatgcctacgtgacctcggcgaatatctaccctgcccgaactctgtttatctttaggaaacggaatgcctgaggtcagaacttctccttagctggtgatcaaaccagctaagactggtggaatccaagatggtggctcacttgacctctaacttcattataatctaatttccatgctaaatcacacttccactagcaccacaacagta-atcaaccaccatgacaatgctgggg---gggcaaaaacat---aaaaaa--aacaaacaggaaggtggcactctggttttgaaaacttctccacccagacccagaaaacaca--attcctccctttgcttttttttatttttatgtttgtagagatgagg--gtctcattatgttgaccaggctggt-ctcgaactcctggtctcaagcaatcctctcatcttg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6400360 434 + 6778120 AAGAtgttatcc-----agtgtaatgcctacatgacctcggtgaatatctaccctgccagaactctgtttatctttaggaaacaggatgcctgagatcagaacttctccttagctggtgatgaagccagccaagactgttggaatccaagatggcggctcacttgacctctaacttcgttataatctaatttccatgctaaatcacactgccactggcaccgtaacagca-atcagccaccatgacaatgctaggg---gggcaaaaacag----aaaaa--aacaaataggaaggtggcactctggctttgaaaacgtttccacccagacccagaaaacaca--attcctccctttgc-tttttTTatttttatttttgtagagatgagg--gtctcattatgttgaccatgctggt-ctcgaactgctggtctcaagcaatcctctcatcctg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 35899 440 + 69927 AAGGtgttatccagtgtaatgtaatgcctacacgacctcagtgaatatctaccccacccgaactctg-ttatctttaggaaacaggatgcctgaggtcagaacttctccttagcaggtgatcaaaccagctaagacctgtggaatccaagatggcggctcacttgacctctaacttcattataatctaacttccatgccaaatcacacttccactagcacgataacagta-atcaaccaccgtgacaatgttggggggtggggcaaaacat----aaaaa--cacagataggaaggtggcactctggttttgaaaacgtctccacccagacccag-aaacaca--attcctccctttgc-tttttTTatttttatttttgtagaggtgagg--gtctcattatgttgaccaggctggt-ctcggactcctggtctcaagcaaccctctcatcttg i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e canFam3.chr33 2339440 1 - 31377067 I e otoGar3.GL873829 225006 0 + 608964 C a score=73294.000000 s hg38.chr3_KI270934v1_alt 83470 20 + 163458 gcctcccaaagttctggg-tt s panTro5.chr3 2555502 20 - 202621043 gcctcccaaagttctggg-tt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144383 20 - 190779 gcctcccaaagttctggg-tt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 98249 19 - 106623 g-ctcccaaagttctggg-tt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2870044 20 - 123690457 gcctcccgaagttctggg-tt i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192441604 10 - 192460366 ----------gTTCTGGG-TT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16418787 9 - 16847902 -----------ttctggg-tt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91385987 11 + 91754291 ----------gttctgggttt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1456147 10 + 1977891 ----------gttctggg-tt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7392533 15 - 7796314 -----ccattgttctggg-tt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73871084 20 + 74750902 gcctcccaaagtgctggg-tt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17307467 20 - 17725628 gcctcccaacgtgttgca-tt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6400794 20 + 6778120 gcctcccaccgtgctggg-tt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36339 20 + 69927 gcctcccaaagtgctggg-tt i aotNan1.NW_018503669v1 C 0 I 18 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19180620 11 - 19675229 I e canFam3.chr33 2339440 1 - 31377067 I e otoGar3.GL873829 225006 0 + 608964 C e rheMac8.chr2 2375330 11 - 204787373 I a score=-27581.000000 s hg38.chr3_KI270934v1_alt 83490 2 + 163458 t-a s panTro5.chr3 2555522 2 - 202621043 t-a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144403 2 - 190779 t-a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 98268 2 - 106623 t-a i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2870064 2 - 123690457 t-a i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192441614 1 - 192460366 T-- i macFas5.chr2 C 0 I 1 s cerAty1.NW_012004056v1 16418796 1 - 16847902 a-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91385998 1 + 91754291 a-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1456157 1 + 1977891 a-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7392548 2 - 7796314 ta- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73871104 2 + 74750902 -ta i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17307487 2 - 17725628 -ta i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6400814 2 + 6778120 -tg i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 36359 18 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19180620 11 - 19675229 I e canFam3.chr33 2339440 1 - 31377067 I e otoGar3.GL873829 225006 0 + 608964 C e rheMac8.chr2 2375330 11 - 204787373 I a score=65778.000000 s hg38.chr3_KI270934v1_alt 83492 16 + 163458 tgggagtgagcca-ttg- s panTro5.chr3 2555524 16 - 202621043 tgggagtgagcca-ttg- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144405 16 - 190779 tgggagtgagcca-ttg- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 98270 16 - 106623 tgggagtgagcca-ttg- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2870066 16 - 123690457 tgggagtgagcca-ttg- i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16418797 16 - 16847902 tgggagtgagcca-ttg- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91385999 16 + 91754291 tgggagtgagcct-ttg- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1456158 16 + 1977891 tgggagtgagcca-ttg- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7392550 15 - 7796314 -tggggtgagcct-ttg- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73871106 17 + 74750902 taggagtaagcca-ttgg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17307489 18 - 17725628 tagcagtaagccgtttgg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6400816 17 + 6778120 taggagtaagcca-ttgg i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e aotNan1.NW_018503669v1 36359 18 + 69927 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19180620 11 - 19675229 I e canFam3.chr33 2339440 1 - 31377067 I e otoGar3.GL873829 225006 0 + 608964 C e macFas5.chr2 192441615 1 - 192460366 I e rheMac8.chr2 2375330 11 - 204787373 I a score=1444549.000000 s hg38.chr3_KI270934v1_alt 83508 240 + 163458 cacctggccactcctccccttgcttttaatgctcagccccttcactaaagatgccctgtatctgtgactt-cctgggtctcacgagcagaaaagttgattt-gtgagccaagctctcacttctcaattccatggccaccaaataaagcctgcactgcttgag-gctcactttcggttttgcatattggcttcatggcaccaaacagggaaagaccccattttagggaaagtggctttgtcagt s panTro5.chr3 2555540 240 - 202621043 cacctggccactcctccccttgcttttaatgctcagccccttcactaaagatgccctgtatctgtgactt-cctgggtctcacgagcagaaaagttgattt-gtgagccaagctctcacttctcaattccatggccaccaaataaagcctgtactgcttgag-gctcactttcggttttgcatattggcttcatggcaccaaacagggaaagaccccattttagggaaagtggctttgtcagt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144421 240 - 190779 cacctggccactcctccccttgcttttaatgctcagccccttcactaaagatgccctgtatctgtgactt-cctgggtctcacgagcagaaaagttgattt-gtgagccaagctctcacttctcaattccatggccaccaaataaagcctgtactgcttgag-gctcactttcggttttgcatattggcttcatggcaccaaacagggaaagaccccattttagggaaagtggctttgtcagt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 98286 237 - 106623 cacctggcca--tctccccttgctttt-atgctcagccccttcactaaagatgccctgtatctgtgactt-cctgggtctcaagagcagaaaagttgatttggtgagccaagctctcacttctcaattccatggccaccaaataaagcctgcactgcttgag-gctcactttcacttttgcatattggcttcatggcacc-aacagggaaagaccccattttagggaaagtggctttgtcagt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2870082 240 - 123690457 cacctggccactcctccctttgcttttaatgctcagccccttcactaaagatgccctatatctgtgactt-cctgggtctcatgagcagaaaagttgattt-gtgagccaagctctcacttctcaattccatggccaccaaataaagcctgcactgcttgag-gctcacttttggttttgcatattggcttcatggcaccaaacagggaaagaccccattttaggggaagtggctttgtcagt i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16418813 239 - 16847902 ctcctggccactcctccccttgcttttcatgctcagccccttcactaaaggtgccctatatctgtgactt-cctgggtctgacgagcagaaaagttgattt-gtgagccaagctctcacttctcaattccatgg-caccaaataaagcctgcactgcttgag-gctcagtttgggttttgcatattggcttcatggcaccaaacagggaaagaccccattttaggggaagtggctttgtcagt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91386015 232 + 91754291 ctcctggccactcctccccttgcttttcatgctcagccccttcactaaaggtggcctatatctgtgactt-cctgggcctcacgagcagaaaagttgattt-gtgagccaagctctcacttctcaattccatgg-caccaaataaagcctgcactgcttgag-gctcagttttggtt-------ttggcttcatggcaccaaacagggaaagaccccattttaggggaagtggctttgtcagt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1456174 239 + 1977891 ctcctggccTCtcctccccttgcttttcatgctcagccccttcactaaaggtgccctatatctgtgactt-cctgggtctcacgagcagaaaagttgattt-gtgagccaagctctcacttctcaattccatgg-caccaaataaagcctgcactgcttgag-gctcagtttgggttttgcatattggcttcatggcaccaaacagggaaagaccccattttaggggaagtggctttgtcagt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7392565 239 - 7796314 ctcccggccactcctcccc-tgctttcaatgctcagccccttcacgaaaggtgccctgtacctgtggctt-cctgggtctcacgagcagaaaagttgattt-gtgagccgagctctcacttctcaattccatggccaccaaataaagcctgcactgcttgag-gctcagctgtggttttgcatattggcttcatggcaccaaacagggaaagaccccattttaggggaagtggctttgtcagt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73871123 230 + 74750902 cacgtggccactcctcctcttgcttttaatgctcagccccctt-----------tctatatctgcgacttcccagagtctcacaagcagaaatggtgattt-gcgagccaagcgctcacttctcagttccacggccaccaaataaagcctgtactgcttgac-cctcactttccgtttcacatattggcttcatggcaccaaacagggaaagaccccatttcagggggagtggctttgtcagt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17307507 229 - 17725628 cacctggccactcctcctcttgcttttaatgctcagccccttt-----------tctatatctgtgactt-ccagagtctcacaagcagaaatgttgattt-gcgagccaagctctcacttctcagttccatggccaccaaataaagcctgccctgcttgac-actcattttcgattttgcatattggcttcatggcaccaaacggggaaagacctcatttcagggggagtggctttgtcagt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6400833 229 + 6778120 cacctggccactcctcctcttgcttttaatgctcagccccttt-----------tctatatctgtgactt-ccagagtctcacaagcagaaatgttgattt-gcgagccaagctctcacttctgagttccatggccaccaaataaagcctgcactgcttgac-actcactttcggttttgcatattggcttcatggcaccaaacagggaaagaccccatttcagggggagtggctttgtcagt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36377 228 + 69927 cacctggccactcctcctcttg-tgttaatgctcagccccctt-----------tctgtatctgtgactt-ccagagtctcacaagcagaaacgttgattt-gcgggccaagctctcacttctcagttccatggccaccaaataaagcctgcactgcttgacaactcactttcggttttgcatattggcttcatggcaccaaacagggcaagaccccatttca-ggggagtggctttgtcagt i aotNan1.NW_018503669v1 I 18 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19180620 11 - 19675229 I e canFam3.chr33 2339440 1 - 31377067 I e otoGar3.GL873829 225006 0 + 608964 C e macFas5.chr2 192441615 1 - 192460366 I e rheMac8.chr2 2375330 11 - 204787373 I a score=29692.000000 s hg38.chr3_KI270934v1_alt 83748 4 + 163458 aaca s panTro5.chr3 2555780 4 - 202621043 aaca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144661 4 - 190779 aaca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 98523 4 - 106623 aaca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2870322 4 - 123690457 aaca i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16419052 4 - 16847902 aaca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91386247 4 + 91754291 aaca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1456413 4 + 1977891 aaca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7392804 4 - 7796314 aaca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73871353 4 + 74750902 aaca i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17307736 4 - 17725628 aaca i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6401062 4 + 6778120 aaca i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36605 4 + 69927 aaca i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 225006 4 + 608964 AGCC i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14809253 394 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e micMur3.chr1 88405079 566 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19180620 11 - 19675229 I e canFam3.chr33 2339440 1 - 31377067 I e macFas5.chr2 192441615 1 - 192460366 I e rheMac8.chr2 2375330 11 - 204787373 I a score=10920.000000 s hg38.chr3_KI270934v1_alt 83752 1 + 163458 A s panTro5.chr3 2555784 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144665 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 98527 1 - 106623 A i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2870326 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16419056 1 - 16847902 A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91386251 1 + 91754291 A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1456417 1 + 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7392808 1 - 7796314 A i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73871357 1 + 74750902 A i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17307740 1 - 17725628 A i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6401066 1 + 6778120 A i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36609 1 + 69927 A i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88405645 1 + 114275543 A i micMur3.chr1 I 566 C 0 s proCoq1.NW_012133858v1 14809647 1 - 22200726 A i proCoq1.NW_012133858v1 I 394 C 0 s otoGar3.GL873829 225010 1 + 608964 A i otoGar3.GL873829 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19180620 11 - 19675229 I e canFam3.chr33 2339440 1 - 31377067 I e macFas5.chr2 192441615 1 - 192460366 I e rheMac8.chr2 2375330 11 - 204787373 I a score=1493624.000000 s hg38.chr3_KI270934v1_alt 83753 169 + 163458 GGACACAGAAGGAAAGA----AATGGAGGATGATTTAGG------Gca-gaagtcagcaaacta-tggtctatgggccaaatctggccactgcctgttttt--gtgcaactcataggctaagaatg-ttttctaca-----------------------------------tttttagatggta-ggagaagaacaaaagagg-aagaatgttttgtcaca s panTro5.chr3 2555785 169 - 202621043 GGACACAGAAGGAAAGA----AATGGAGGATGATTTAGG------Gca-gaagtcagcaaacta-tggtctatgggccaaatctggccactgcctgttttt--gtgcaactcataggttaagaatg-ttttctaca-----------------------------------tttttagatggta-ggagaagaacaaaagaag-aataatgttttgtcaca i panTro5.chr3 C 0 I 5 s panPan2.chrUn_NW_014024201v1 144666 169 - 190779 GGACACAGAAGGAAAGA----AATGGAGGATGATTTAGG------Gca-gaagtcagcaaacta-tggtctatgggccaaatctggccactgcctgttttt--gtgcaactcataggttaagaatg-ttttctaca-----------------------------------tttttagatggta-ggagaagaacaaaagaag-aataatgttttgtcaca i panPan2.chrUn_NW_014024201v1 C 0 I 5 s gorGor5.CYUI01000576v1 98528 168 - 106623 GGACACAGAAGG-AAGA----AATGGAGGATGATTTAGG------Gca-gaagtcagcaaacta-tggtctatgggccaaatctggccactgcctgttctt--gtgcaactcataggctaagaatgtttttctaca------------------------------------ttttagatggta-ggagaagaacaaaagaag-aataatgttttgtcaca i gorGor5.CYUI01000576v1 C 0 I 4 s nomLeu3.chr11 2870327 169 - 123690457 GGACACAGAAGGAAAGA----AATGGAGGATGATTTAGG------Gca-aaagtcagcaaacta-tggtctatggaccaaatctggccactgcctgttttt--gtgcaactcataggctaagaatg-ttttctaca-----------------------------------tttttagatggta-ggagaagaacaaaagaag-aataatgttttgtgaca i nomLeu3.chr11 C 0 I 5 s cerAty1.NW_012004056v1 16419057 175 - 16847902 GGACACAGAAGGAAAGAAGAGAATGGAGGATGACTTAGG------Gcaggaggtcagccaacta-cggtctatgggccaaatctggccactgcctgttttt--gtgcaactcataggctaagaatg-ttttctaca-----------------------------------tttttagatggta-ggaaaagaacaaaagaaggaataatgttttgtgaca i cerAty1.NW_012004056v1 C 0 I 5 s chlSab2.chr15 91386252 174 + 91754291 GGACACAGAAGGAAAGAAGAGAATGGAGGATGACTTAGG------Gca-gaggtcagcaaacta-cggtctatgggccaaatctggccactgcctgttttt--gtgcaactcataggctaagaatg-ttttctaca-----------------------------------tttttagatggta-ggaaaagaacaaaagaagaaataatgttttgtgaca i chlSab2.chr15 C 0 I 5 s manLeu1.NW_012102020v1 1456418 175 + 1977891 GGACACAGAAGGAAAGAAGAGAATGGAGGATGACTTAGG------Gcaggaggtcagccaacta-cggtctatgggccaaatctggccactgcctgttttt--gtgcaactcataggctaagaatg-ttttctaca-----------------------------------tttttagatggta-ggaaaagaacaaaagaaggaataatgttttgtgaca i manLeu1.NW_012102020v1 C 0 I 1465 s colAng1.NW_012118932v1 7392809 174 - 7796314 GGACACAGAAGGAAAGAAGAGATTGGAGGATGACTTAGG------Gca-gaggtcagcaaacta-cggtctatgggccaaatctggccactgcctgttttt--gtgcaactcataggctaagaatg-ttttctaca-----------------------------------tttttagatggta-ggaaaagaacaaaagaagaaataatgttttgtggca i colAng1.NW_012118932v1 C 0 I 5 s calJac3.chr17 73871358 172 + 74750902 GGACACAGAAGGAAAGAAGAGGATGGAGGATGACCTATG------Gca-gaggtcagcaaacta-cagtctatggggcaaatctggccactgcctgtgtct--gtacgactcataggctaagaatg-ttttctgtg-----------------------------------ttgttagatggca-ggagaaaaacaaaa-aag-aataatgttttgtgaca i calJac3.chr17 C 0 I 5 s saiBol1.JH378146 17307741 172 - 17725628 GGACACAGAAGGAAAGCAGAGAATGGAGGATGACTCATG------Gca-gaggtcagcaaactg-cagtctatggggcaaatctggccactgcctgtttct--gtacaactcataggctaagaatg-gtttctgta-----------------------------------tttttagatggta-ggagaaaaacataa-aag-aataatgttttgtgaca i saiBol1.JH378146 C 0 I 5 s cebCap1.NW_016107444v1 6401067 172 + 6778120 GGACACAGAAGGAAAGAAGAGAATGGAGGATGACTTATG------Gca-gaggtcagcaaacta-caggctatggggcaaatctggccactgcctgtttct--gtacacctcataggctaagaatg-ttttctgta-----------------------------------tttttagatggta-ggagaaaaacaaaa-aag-aataatgttttgtgaca i cebCap1.NW_016107444v1 C 0 I 5 s aotNan1.NW_018503669v1 36610 172 + 69927 GGACACAGAAGGAATGAAGAGAATGGAGGATGACTTTCG------Gca-gaggtcagcaaacta-tagtctgtggggcaaatctggccactgcctgtttct--gtacaactcataggctaagaatg-ttttctgta-----------------------------------tttttagatggta-ggagaaaaacaaaa-aag-actaatgtttcatgaca i aotNan1.NW_018503669v1 C 0 I 5 s micMur3.chr1 88405646 169 + 114275543 GGACACAGAAGGAAAGAAAAGAAC---AGATGATTTAGG------GCT-AAggtcagcaaacca-cagttcatgggccaaatatggccactgcctattttt--gtatagctcacaagctaacaatg-tttcctaca-----------------------------------tttttagatggca-ggaaaaaatcaaaagaa--aataatatttcatgaca i micMur3.chr1 C 0 I 5 s proCoq1.NW_012133858v1 14809648 173 - 22200726 GGACACAGAAGGAAAGAACAGAATGGAGGATGATTTAGG------CTC-gaggtcagcaaacca-cagttcatgggccaaatatggccactgcctgttttt--gtacagctcacaagctaagagtg-ttttctaca-----------------------------------tttttagatgggagggaaaaaatcaaaagaa--aataatatttcatgaca i proCoq1.NW_012133858v1 C 0 I 5 s otoGar3.GL873829 225011 159 + 608964 GGACAGAGAAGGAAAGAAAAGAATGGAAGATAATATGGG------Gca-gagatcagcaaaccatcagttcatgagccaaatctggcccctgcctgttttt--gtacagctcacacgctaagaatg-ctttctaca-----------------------------------tttttctatggtaggcaaaaaaccaagaga-----------------gca i otoGar3.GL873829 C 0 I 5 s canFam3.chr33 2339441 206 - 31377067 GGGCACAGAAGAGAAAT-----ACGAAGGACGATTTAGAGGTGACGca-gagggcagcaaacca-caatccgcggctgcattgggcttgctgcaggttgtttggtccagatcacaagttaagaatg-cttttcacaaaaaaaaaaaaaaaaaaaaaagaatgcttttcacgcttttaagtggtt-gaaaaaaagtcaa------aagaatatttcatgaca i canFam3.chr33 I 1 I 5 e mm10.chr16 32805152 1020 + 98207768 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19180620 11 - 19675229 I e macFas5.chr2 192441615 1 - 192460366 I e rheMac8.chr2 2375330 11 - 204787373 I a score=984517.000000 s hg38.chr3_KI270934v1_alt 83922 102 + 163458 aaagtatatgagattcaaatttcagtgtccacagaCGGCAATCCTGGCTCCTACCCCTAAAACAATCATTGCAGTGG-AGCTCTGCCCTAGCTACGGCCCCTT s panTro5.chr3 2555959 102 - 202621043 aaagtatatgagattcaaatttcagtgtccacagacaGCAATCCTGGCTCCTACCCCTAAAACAATCATTGCAGTGG-AGCTCTGCCCTAGCTATGGCCCCTT i panTro5.chr3 I 5 C 0 s panPan2.chrUn_NW_014024201v1 144840 102 - 190779 aaagtatatgagattcaaatttcagtgtccacagacaGCAATCCTGGCTCCTACCCCTAAAACAATCATTGCAGTGG-AGCTCTGCCCTAGCTATGGCCCCTT i panPan2.chrUn_NW_014024201v1 I 5 C 0 s gorGor5.CYUI01000576v1 98700 102 - 106623 aaagtatatgagattcaaatttcagtgtccacagacaGCAATCCTGGCTCCTACCCCTAAAACAATCATTGCAGTGG-AGCTCTGGCCTAGCTACGGCCCTTT i gorGor5.CYUI01000576v1 I 4 C 0 s nomLeu3.chr11 2870501 102 - 123690457 aaagtatatgagattcaaatttcagtgtccacagacaGCAATCCTGGCTCCTACCCCTAAAACAATCATTGCAGTGG-AGCTCGGCCCTAGCTACGGCCCCTT i nomLeu3.chr11 I 5 C 0 s cerAty1.NW_012004056v1 16419237 102 - 16847902 aaagtatatgagattcaaatttcagtgtccacagaGAGCAATCCTGGCTCCTACCCCTACAACAATCATTGCAGTGG-AGCTCTGCCCTAGATACAGCCCCTT i cerAty1.NW_012004056v1 I 5 C 0 s chlSab2.chr15 91386431 102 + 91754291 aaagtatatgcgattcaaatttcagtgtccaCGGACAGCAATCCTGGTTCCTACCCCTAAAACAATCATTGCAGTGG-AGCTCTGCCCTAGCTACAGCCCCTT i chlSab2.chr15 I 5 C 0 s manLeu1.NW_012102020v1 1458058 102 + 1977891 aaaatatacgagattcaaatttcagtgtccacagaGAGCAATCCTGGCTCCTACCCCTACAACAATCATTGCAGTGG-AGCTCTGCCCTAGATACAGCCCCTT i manLeu1.NW_012102020v1 I 1465 C 0 s colAng1.NW_012118932v1 7392988 102 - 7796314 aaagtatatgagattcaaatttcagtgtccacagacaGCAATCCTGGCTCCTACCCCTAAAACAATCATTGCAGTGG-AGCTCTGCCCTAGCTACAGCCCCTT i colAng1.NW_012118932v1 I 5 C 0 s calJac3.chr17 73871535 102 + 74750902 aaagtagatgaggttcaaatttcagtgtccacagacaGCAATCCTGGCTCCTATCCCTAAAACCATCATTGCAGTGG-AGCTCTGCCATAGCGAAGGCCCCTT i calJac3.chr17 I 5 C 0 s saiBol1.JH378146 17307918 95 - 17725628 aaagtatatgagattcaaatttcagtgtccGCAGACAGCAATCCTGGCTCCTA-CCCCAAACCGATCATCACAGTGG-AGCTCTGCT------AAGGCCCCTT i saiBol1.JH378146 I 5 C 0 s cebCap1.NW_016107444v1 6401244 102 + 6778120 gaagtatatgagattcaagttttagtgtccacagacaGCAATCCTGGCTCCTACCCCTAAACCGATCATTGCAGTGG-AGCTCTGCCATAGCTAAGGCCCCTT i cebCap1.NW_016107444v1 I 5 C 0 s aotNan1.NW_018503669v1 36787 102 + 69927 aaagtatatgagattcaaatttcagtgtccacagacaGCAATCCTGGCTCCTACCCCTAAAACGATCATTGCAGTGG-AGCTCTGCCATAGCTAAGGCCCCTT i aotNan1.NW_018503669v1 I 5 C 0 s micMur3.chr1 88405820 101 + 114275543 aaactatatgaaattcaaatttcagtgtcgataGGCAGAAATCCTGGCTCCTACCCCTAAAACCACCGTTGCA-TGG-AGCTCTGCCCTAGCTCAGGCCCCTT i micMur3.chr1 I 5 I 20 s proCoq1.NW_012133858v1 14809826 101 - 22200726 aaactatatgaaactcaaatttcagtgtccataGGCAGAAATCCTGGCTCCTACCCCTAAAACCACCATTGCA-TGG-AGCTCTGCCCTAGCTCAGGCCCCTT i proCoq1.NW_012133858v1 I 5 I 20 s otoGar3.GL873829 225175 102 + 608964 aaactatatgaaattcatatttcagtgtccataGGCAGAATTCATGGCTCCTATCCCTAAAACCATCATTGCA-AGGAAGCTCCAACCTAGGTCAGGCCTCTT i otoGar3.GL873829 I 5 I 2 s canFam3.chr33 2339652 101 - 31377067 aaattatataaaatgtcagtgtcagtgtccaCGGCCCGGAACCACGGCTCCGGGCCCTAAAACCATGGTTGCTGCAG-GGCTCTGCCCCA-CTCGGGTCTCTT i canFam3.chr33 I 5 C 0 e mm10.chr16 32805152 1020 + 98207768 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19180620 11 - 19675229 I e macFas5.chr2 192441615 1 - 192460366 I e rheMac8.chr2 2375330 11 - 204787373 I a score=79277.000000 s hg38.chr3_KI270934v1_alt 84024 12 + 163458 TCTTCTTTTGGT s panTro5.chr3 2556061 12 - 202621043 TCTTCTTTTGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144942 12 - 190779 TCTTCTTTTGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 98802 12 - 106623 CTTCTTTTTGGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2870603 12 - 123690457 TCTCCCTTTGGT i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16419339 12 - 16847902 TCTCCCTTTGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91386533 12 + 91754291 TCTCCCTTTGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1458160 12 + 1977891 TCTCCCTTTGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7393090 12 - 7796314 TCTCCCTTTGGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73871637 12 + 74750902 TCTCCCTCTGGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17308013 12 - 17725628 TCTCCCTCTGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6401346 12 + 6778120 TCTCCCTCTGGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36889 12 + 69927 TCTCCCTCTGGT i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 225279 12 + 608964 CCCCACTTAGGT i otoGar3.GL873829 I 2 I 6 s canFam3.chr33 2339753 12 - 31377067 TTCCTGACTGGT i canFam3.chr33 C 0 I 6 e proCoq1.NW_012133858v1 14809927 20 - 22200726 I e mm10.chr16 32805152 1020 + 98207768 I e micMur3.chr1 88405921 20 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19180620 11 - 19675229 I e macFas5.chr2 192441615 1 - 192460366 I e rheMac8.chr2 2375330 11 - 204787373 I a score=508963.000000 s hg38.chr3_KI270934v1_alt 84036 46 + 163458 TCCCTGACTTTGGGGCCTGGAGGGCACAAAGGCAAGGAGCAGGCTG s panTro5.chr3 2556073 46 - 202621043 TCCCTGACTTTGGGGTCTGGAGGCCACAAAGGCAAGGAGCAGGCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144954 46 - 190779 TCCCTGACTTTGGGGTCTGGAGGCCACAAAGGCAAGGAGCAGGCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 98814 45 - 106623 TCCCTGACTTTGGGGTCTGGAGGCCACAAA-GTAAGGAGCAGGCTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2870615 46 - 123690457 TCCCTGACTTTGGGGTCTGGAGGCCACAAAGGCAAGGAGCAGGCTG i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16419351 46 - 16847902 TCCCTGACTTTGGGGTCTGGAGGCCACAAAGGCAAGGAGCAGGCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91386545 46 + 91754291 TCCCTGACTTTGGGGTCTGGAGGCCACAAAGGCAAGGAGCAGGCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1458172 46 + 1977891 TCCCTGACTTTGGGGTCTGGAGGCCACAAAGGCAAGGAGCAGGCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7393102 46 - 7796314 TCCCTGACTTTGGGGTCTGGAGGCCACAAAGGCAAGGAGCAGGCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73871649 46 + 74750902 TCCCTGACTTTGGGGTCTGGAGGCCACAAAGGCAAGGAGTAGGCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17308025 46 - 17725628 TCCCTGACTTTGGGGTCTAGAGGCCACAAAGGCAAGGAGCAGGCCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6401358 46 + 6778120 TCCCTGACTTTGGGGTCTGGAGGCCACAAAGGCAAGGAGCAGGCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36901 46 + 69927 TCCCTGACTTTGGGGTCTGGAGGCCACAAAGGCAAGGAGCAGGCTG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88405941 45 + 114275543 TCCCTGACTTTGGGGCCTGGAGGCCATGAAGGC-AGGAGCAGGCTG i micMur3.chr1 I 20 C 0 s proCoq1.NW_012133858v1 14809947 45 - 22200726 TCCCTGACTTTGGGGCCTGGAGGCCATGAAGGC-AGGAGCAGGCTG i proCoq1.NW_012133858v1 I 20 C 0 s otoGar3.GL873829 225297 45 + 608964 TCTCTGACCTTGGGGCCTGGAGGCCACAAAAGC-AGGGGCAGGCTG i otoGar3.GL873829 I 6 C 0 s canFam3.chr33 2339771 44 - 31377067 TCCCTGACTTTGGGGGCTGGAGGCCA--GGGGGTAGGGGCAGCTTG i canFam3.chr33 I 6 C 0 e mm10.chr16 32805152 1020 + 98207768 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19180620 11 - 19675229 I e macFas5.chr2 192441615 1 - 192460366 I e rheMac8.chr2 2375330 11 - 204787373 I a score=739946.000000 s hg38.chr3_KI270934v1_alt 84082 80 + 163458 CCATC--CACCCCTTCTCAGAGAACCTGCAGGGAGCTCACCATGCTCTGCATCCAGTCTAGGTGGCTCCTAGC-GGGGCTTGG s panTro5.chr3 2556119 80 - 202621043 CCATC--CACCCCTTCTCAGAGAACCTGCAGGGAGCTCACCATGCTCTACATCCAGTCTAGGTGGCTCCTAGC-GGGGCTTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 145000 80 - 190779 CCATC--CACCCCTTCTCAGAGAAACTGCAGGGAGCTCACCATGCTCTACATCCAGTCTAGGTGGCTCCTAGC-GGGGCTTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 98859 80 - 106623 CCATC--CACCCCTTCTCAGAGAACCTGCAGGGAGCTCACCATGCTCTGCATCCAGTCTA-GTGGCTCCTAGCGGGGGCTTGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2870661 80 - 123690457 CCATC--CACCCCTTCTTGGAGAAACTGCCGGGAGCTTACCGTGCTCTGCATCCAGTCTAGGTGGTTCCTAGC-GGGGCTTAG i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 16419397 80 - 16847902 CCATC--CACCCCTTCTCAGAGAACCTACAGGGAGCTCACCATGCTCTGCATCCTGTCTAGGTGGCTCCTAGC-GGGGCTTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91386591 80 + 91754291 CCATC--CACCCCTTCTCGGGGAACCTACAGGGAGCTCACCATGCTCTGCATCCGGTCTAGGTGGCTCCTAGC-GGGGCTTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1458218 80 + 1977891 CCATC--CACCCCTTCTCAGAGAACCTACAGGGAGCTCACCATGCTCTGCATCCGGTCTAGGTGGCTCCTAGC-GGGGCTTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7393148 80 - 7796314 CCACC--CACCCCTTCTCAGAGAACCTACAGGGAGCTCACCGTGCTCTGCGTCTGGTCTAGGCGACTCCTAGC-CGGGCTTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73871695 80 + 74750902 CCATC--CACCCCTTCTTGGAGAGCTTCCAGGGAGCTTACCATGCTCTGCACCCAGTCTAGACGGCTCCTAGC-AGGGCTGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17308071 82 - 17725628 CCATCCACACCCCTTCTTGGAGAACTTCCAGGGAGCTCACCGTGCTCTGCACCCAGTCTAGATGGCTCCTAGC-AGGGCTGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6401404 79 + 6778120 CCATC--CACCCCCTCTTGGAGAACTTCCA-GGAGCTCACCGTGCTCTGCACCCAGTCTAGATGGCTCCTAGC-AGGGCTGGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36947 80 + 69927 CCATC--CACCCCTTCTTGGAGAACTTCCAGGGAGCTCACTGTGATCTGCACCCAGTCTCGGTGGCTCCTAGC-AGGGCTGGG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88405986 79 + 114275543 CCACC--CACCCCTG-TGGGAGAACCTTCAGGGTGCTCACCATGCTCTGCACCCAGTCTAGATTGCTTCTAGT-AGGGCTTGG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14809992 79 - 22200726 CCACC--CCACCTTG-TGGGAGAACCTCCAGGGTGCTCACCATGCTCTGCACCCAGTCTAGATTGCTTCTAGT-AGGGATTGG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 225342 79 + 608964 CCACC--CACCCCTTCCAGGAGAACCT-CGGGGTGCTCACCGTGCTCTTCACCCAATCTGGATTGCTTCCAGT-AGGACTTGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32806172 69 + 98207768 CCCCC--CACCCCCGCT-----------CAGGGCACTCACCATGTTTTGTACCAAATCTTGATTGTTCCTGGC-TGAGTCGAG i mm10.chr16 I 1020 C 0 s canFam3.chr33 2339815 78 - 31377067 -TCGC--CGCCCCGTCTGGGAGACCGTCTAGGGCCCTCCCCGCGCTCTGCGTC-GGCCCAGACGGCGTCTCCC-AGGGCGCGG i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19180620 11 - 19675229 I e macFas5.chr2 192441615 1 - 192460366 I e rheMac8.chr2 2375330 11 - 204787373 I a score=3776298.000000 s hg38.chr3_KI270934v1_alt 84162 290 + 163458 TGGGTTCTCCATCCTCAGCACCATCTGCAGCACCATCTTGGTCATCTGAGAAGCTGAGAGAAACACAAGGT-AAATGTTCCTGTCCTCATTTCTGCCTCCCAACCCCA--CT-GCTGCTGCTCAATGT-CCCCAGTATCT-CTCTGCAGACTCCTGTGTGCCCTCAAAAGTCTACACGGTACCAGTCAAGAGACAT-CCATACTGCAAG--ATGATAGAAAGG----TAAGT-GGAACCCAACC-ACCTCATTCTCTACCC--TCATGTCTACCAC-GGACAGCTGAACCTCTCCC-TGTGGA-ACCTGG s panTro5.chr3 2556199 290 - 202621043 TGGGTTCTCCATCCTCAGCACCATCTGCAGCACCATCTTGGTCATCTGAGAAGCTGAGAGAAACACAAGGT-AAATGTTCCTGTCCTCATTTCTGCCTCCCAACCCCA--CC-GCTGCTACTCAATGT-CCCCAGTATCT-CTCTGCAGACTCCTGTGTGCCCTCAAAAGTCTACATGGTACCAGTCAAGAGACAT-CCATACTGCAAG--ATGATAGAAAGG----TAAGT-GGAACCCAACC-ACCTCATTCTCTACCC--TCATGTCTACCAC-GGACAGCTGAACCTCTCCC-TGTGGA-ACCTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 145080 290 - 190779 TGGGTTCTCCATCCTCAGCACCATCTGCAGCACCATCTTGGTCATCTGAGAAGCTGAGAGAAACACAAGGT-AAATGTTCCTGTCCTCATTTCTGCCTCCCAACCCCA--CC-GCTGCTACTCAATGT-CCCCAGTATCT-CTCTGCAGACTCCTGTGTGCCCTCAAAAGTCTACATGGTACCAGTCAAGAGACAT-CCATACTGCAAG--ATGATAGAAAGG----TAAGT-GGAACCCAACC-ACCTCATTCTCTACCC--TCATGTCTACCAT-GGACAGCTGAACCTCTCCC-TGTGGA-ACCTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 98939 296 - 106623 TGGGTTCTCCATCCTCAGCACCATCTGCAGCACCATCTTGGTCATCTGATAAGCTGAGAGAAACACAAGGT-AAATGTTCCTGTCCTCATTTCTGCCTCCCAACCCCA--CCGGCTGCTGCTCAATGT-CCCCAGTATCT-CTCTGCAGACTCTTGTGTGCCCTCAAAAGTCTACATGGTACCAGTCAAGAGACATCCCATACTGCAAG--ATGATAG-AAGG----TAAGT-GGAACCCAACCAACCTCATTCTCTACCCCTCCATGTCTACCACTGGACAGCTGAACCTCTCCCTTGTGGG-ACCTGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2870741 289 - 123690457 TGGCTTCTCCATCCTCAGCACCATCTGCAGCACCATCTTGGTCATCTGAGAAGCTGAGAGAAACACAAGGT-AAACGTTCCTGTCCTCATTTCTGCCTCCCAACCCCA--CT-GCTGCTGCTCAGCAT-CCCCAGTATCT-CTCTGCAGACTCCTGTCTGCCCTCAAAAGTCTACATGGTACCAGTCAAGAGACAT-CCATACTG-AAG--ACGATAGAAAGG----TAAGT-GGAACCCAACC-ACCTCATTCTCTACCC--TCATGTCTACCAC-GGACAGCTGAACCTCTCCC-TGTGGA-ACCTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2375341 285 - 204787373 TGGGTTCTCCTTCCTCAGCACCATCTGCAGCACCACCTTGGTCATCTGAGAAGCTGAGAGAAATACAAGGT-GAACGTTCTTGTCCTCATTTCTGCCTCCCACCCCCA--CT-GCTGTTGCTCAACGT-CCCCAGCATCT-CTCCGCAGACTCCTGTCTGCCCTCAAAAGTCTACATGGTGCCAGTCAAGAGACAG-CCATACTGCAAG--AAGATAGAAAGG----TAAGT-GGAACCCAACC-ACCTCATTCTCTGCCC--TCATGTCTACCAC-GGACAGCTGAA-----CCC-TGTGGA-ACCTGG i rheMac8.chr2 I 11 C 0 s macFas5.chr2 192441616 285 - 192460366 TGGGTTCTCCTTCCTCAGCACCATCTGCAGCACCACCTTGGTCATCTGAGAAGCTGAGAGAAATACAAGGT-GAACGTTCTTGTCCTCATTTCTGCCTCCCACCCCCA--CT-GCTGTTGCTCAACGT-CCCCAGCATCT-CTCCGCAGACTCCTGTCTGCCCTCAAAAGTCTACATGGTGCCAGTCAAGAGACAG-CCATACTGCAAG--AAGATAGAAAGG----TAAGT-GGAACCCAACC-ACCTCATTCTCTGCCC--TCATGTCTACCAC-GGACAGCTGAA-----CCC-TGTGGA-ACCTGG i macFas5.chr2 I 1 C 0 s macNem1.NW_012014355v1 19180631 279 - 19675229 TGGGTTCTCCTTCCTCAGCACCATCTGCAGCACCACCTTGGTCATCTGAGAAGCTGAGAGAAATACAAGGT-GAACGTTCTTGTCCTCATTTCTGCCTCCCACCCCCA--CT-GCTGTTGCTCAACGT-CCCCAGCATCT-CTCCACAGACTCCTGTCTGCCCTCAAAAGTCTACATGGTGCCAGTCAAGAGACAG-CCATACTGCAAG--AAGATAGAAAGG----TAAGT-GGAA------C-ACGTCATTCTCTGCCC--TCATGTCTACCAC-GGACAGCTGAA-----CCC-TGTGGA-ACCTGG i macNem1.NW_012014355v1 I 11 C 0 s cerAty1.NW_012004056v1 16419477 290 - 16847902 TGGGTTCTCCTTCCTCAGCACCATCTGCAGCACCACCTTGGTCATCTGAGAAGCTGAGAGAAACACCAGGT-GAATGTTCTTGTCCTCATTTCTGCCTCCCACCCCCA--CT-GCTGTTGCTCAACGT-CCCCAGTATCT-CTCCGCAGACTCCTGTCTGCCCTCAAAAGTCTACATGGTACCAGTCAAGAGACAG-CCATACTGCAAG--AAGCTAGAAAGG----TAAGT-GGAAACCAACC-ACCTCATTCTCTGCCC--TCATGTCTACCAC-GGAAGGCTGAACCTCTCCC-TGTGGA-ACCTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91386671 290 + 91754291 TGGGTTCTCCTTCCTCAGCACCATCTGCAGCACCACCTTGGTCATCTGAGAAGCTGAGAGAAACACAAGGT-GAACGTTCTTGTCCTCATTTCTGCCTCCCACCCCCA--CT-GCTGTTGCTCAGCGT-CCCCAGTATCT-CTCCGAAGACTCCTGTCTGCCCTCAAAAGTCTACATGGTACCAGTCAAGAGATGG-CCATACTGCAAG--AAGATAGAAAGG----TAAGT-GGAACCCAACC-ACCTCATTCTCTGCCC--TCATGTCTACCAC-GGACAGCTGACCCTCTCCC-TGTGGA-ACCTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1458298 290 + 1977891 TGGGTTCTCCTTCCTCAGCACCATCTGCAGCACCACCTTGGTCATCTGAGAAGCTGAGAGAAACACCAGGT-GAATGTTCTTGTCCTCATTTCTGCCTCCCACCCCCA--CT-GCTGTTGCTCAACGT-CCCCAGTATCT-CTCCACAGACTCCTGTCTGCCCTCAAAAGTCTACATGGTACCAGTCAAGAGACAG-CCATACTGCAAG--AAGATAGAAAGG----TAAGT-GGAAACCAACC-ACCTCATTCTCTGCCC--TCATGTCTACCAC-GGAAGGCTGAACCTCTCCC-TGTGGA-ACCTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7393228 290 - 7796314 TGGGTTCTCCTTCCTCAGCACCATCTGCAGCACCACCTTGGTCATCTGAGAAGCTGAGAGAAACACAAGGT-GAACGTCCTTGTCCTCATTTCTGCCTCCCAGCCCCA--CT-GCTGTTGCTCAACGT-CCCCAGCATCT-CTCCGCAGACTCCTGTCTGCCCTCAAAAGTGTACACGGTACCAGTCAAGAAACAG-CCACACTGCAAG--AAGACAGAAAGG----TCAGC-AGAACCCAACC-GCCTCGTTCTCTGCCC--TCACGTCTGCCAC-GGACAGCTGAACCTCTCCC-TGCGGA-ACCTGG i colAng1.NW_012118932v1 C 0 I 312 s calJac3.chr17 73871775 286 + 74750902 TGGGTTCTCCATCCTCAGCACCATCTGCAGCCCCATCTTGGTCATCTGAGAAGCTGAAAGAAACACAAGGT-GAAGGCTCCTGTCATCATTTCTGCCTCCCACACCCA--CT-GCTGCTGCCCAGCAT-CCCCGGCATCT-CTCTGCAGACTCCTGTCTCCCCTCAAAAGTCTACCTGCTGCCAGTCAAGAGGCAT-CCATACTGCAAG--AAGAGAGAACGT----TAAGT-GGACCCCAGCC-ACCTCTTTCTCC-TCT-----TCTCTACCAC-AGACAGCTTAACCTCTCTC-TGTGGA-ACCTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17308153 284 - 17725628 TGGGTTCTCCATCTTCAGCACCATCTGCAGCCCCATCTTGGTCATCTGAGAAGCTGAGAGAAACAC-AGGT-GAAAGCTCCTGTCATCATCTCTGCCTCCCACACCCA--CT-GCTGCTGCCCTACAT-CCACAGCATCT-CTCTGCAGACTCCTGTCTCCCCTCAAAAGTCTACCTGC-ACTGGTCAAGAGACAT-CCACACTGC-----AAGAGAGAGCGT----TAAGT-GGGACCCAGCC-ACCTCTTTCTCC-TCC--TCATCTCTACCAC-AGACAGCTTAACCTCTCTC-TGTGGA-ACCTGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6401483 288 + 6778120 TGGGTTCTCCATCCTCAGCACCATCTGCAGCCCCATCTTGGTCATCTGAGAAGCTGAGAGAAACACAAGGT-GAAAGGTCCTGTCGTCATTTCTGCCTCCCACACCCA--CT-GCTGCTGCCCAACAT-CCGCAGCGTCT-CTCTGCAGATTCCTGTCTCCCCTCAAAAGTCTACCGGC-ACCAGTCAAGAGACAT-CCATACTGCAAG--AAGAGAGAGCGT----TAAGT-GGAACCCAGCC-ACCTCTTTCTCC-TCC--TCATCTCTACCAC-AGACAGCGTAACCTCTCTC-TGTGGA-ACCTGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 37027 289 + 69927 TGGGTTCTCCATCCTCAGCACCATCTGCAGCCCCATCTTGGTCATCTGAGAAGCTGAGAGAAACACAAGGT-CAAAGCTCCTGTCTTCATTTCTGCCTCCCACACCCA--CT-GCTGCTGCCCAACAT-CCCCAGCGTCT-CTCCACAGACTCCTGTCTCCCCTCAAAAGTCTACCTGCTACCAGTCAGGAGACAT-CCACACTGAAAG--AAGAGAGAACAG----TAAGT-GGAACCCAGAC-ACCTCTTTCTCC-TCC--TCATCTCTACCAC-AGACAGCTTAACCGCTCTC-TGTGGA-ACCCGG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88406065 287 + 114275543 GGTGGTGTCCGTCCTCAGCACCATCTGCAGCACCATCCTGGTTGCCTGGGAAGCTGAGAGAAACACAAGTT-GGAATCGTCTGTCCTCATCTCGGCCTCCTACCCCCA--CT-GCTGCTCCCCATCTT-CCCCGGAACCT-CTCTGCAGACTCCTGTCTGCCCTCAAAAGTCTACACTTCACCAGCCAAAAGGCAT-CCACAGTGCAAGAAATGGAAGGGAGT----TAGGT-GGAA-----CC-ACCTCATTCCCCTCCT--TCATCCCTGACAC-TGACAGCTTAACCTCTCCC-TGTGGA-ACCTGA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14810071 287 - 22200726 GGCAGCGTCTGTCCTCAGCACCATCTGCAGCACCATCCTGGTTGTCTGGGAAGCTGAGAGAAACACAGGTT-GGAAGCTTCTGTCCTTGTCTCGGCCTCCTACCCCCA--CT-GCTGCTGCCCAACTT-CCCCGGCACCT-CTCTGCAGACTCCTGTCTGCCCTCAAAAGTCTACACTGGACCAACCAAGAGGCAT-CCACACTGCAAGAGAAGGCAGGGAGT----TAGGT-GGAA-----CC-ACCTCATTCCCCTCCT--TCATCCCTACCAC-TGACAGCTTAACCTCTCCC-TGTGGA-ACCTGA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 225421 288 + 608964 GGGAGTGTCTGTCCTCAGCACCATCTGTAGCACCATCCTGGTCGTCTGAGGAGCTGAGAGAAACACAGGTTGGGAGGCTGCTATCCTCATCTCAGCCTCCCA-CCCCA--CT-ACTGCTGCTCATCTTCCCCCAGCACCT-CTCTGCAGACTCCTGCCTGCCCTCAAAAGTATACATGGGACCAGCCAAGAGGCAT--CACCCTGCAGGAGAAGGGAGGGAGA----TAGGTGGGAA-----CC-ACCTCATTCCCCACCT--TCATCCCCACCAC-TGACAGCTTAACCTCTCCC-TGGGGA-ACCTGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32806241 266 + 98207768 TGGCCTCTCGGTCCTCAGCACCATCTGTAGCACCATCTTGGGAGTGTGAAAGGCT----GGAACACAGGGT-GAAGGC-CTTGTCTTCATCCGTGCTCCTCTCCCCCAGCCC-ACTTCTGGTCAACAT-CCCCAACACCT-CTCTGAGGACTCTT--CTGCTCTGACATCTCCAAGCAA----GGCCAAGCGGCAT-ACATAGAGCAAG-------AAAAGGT----TGGGC----------CC-ACCACCTTTCCTAGCC--TGGTTTTCACCAC-TGATAGCTCAGCCTCTCCC-TGTGGG-ACCTA- i mm10.chr16 C 0 C 0 s canFam3.chr33 2339893 278 - 31377067 --GCTTCTGCGGCCTCAGCACCACCCGCGGCACCACCCGGGGT-TCTGAGAAGCTGA--GAAACTCCAGGC-GGCAGCTCCTGTCCCCACCCGGGGCTCCCACGCCCC--CT-CCGGCTGCCTAACCT-CCTCAGCTCCCACTCTGCAAAC---------CCCTCGAAAGTCTACATGG-GCAGGTCAAGAGGCAT-CTGTATTTCAAG---AGATGGAAGGGCCGTTGGGG-GGAACCCCATC-GCCCCACTCCCCACCC--TGATCCCCA--AC-CACCAGATTAAGCTCTCCC-TGTGGGCATCTGG i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2719477 54 - 6579706 I a score=1187244.000000 s hg38.chr3_KI270934v1_alt 84452 95 + 163458 AAAAGTAGCTCAGAGAGGAGTAGCA--GGTGGCAAGGAACATCAGG-GAAACAAAGCTAGAAGGAGCATGTAGG----CACCTTTGACCTGAAATAGA---------CAAG s panTro5.chr3 2556489 95 - 202621043 AAAAGTAGCTCAGAGAGGAGTAGCA--GGTGGCAAGGAACATCAGG-GAAACAAAGCTAGAAGGAACATGTAGG----CACCTTTGACCTGAAATAGA---------CAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 145370 95 - 190779 AAAAGTAGCTCAGAGAGGAGTAGCA--GGTGGCAAGGAACATCAGG-GAAACAAAGCTAGAAGGAACATGTAGG----CACCTTTGACCTGAAATAGA---------CAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 99235 95 - 106623 AAAAGTAGCTCAGAGAGGAGTAGCA-GGGTGGCAAGGAACATCAGG-GAAACAAAGCTAGAAGGAACATGTAGG----CA-CTTTGACCTGAAATAGA---------CAAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2871030 94 - 123690457 AAAAGTAGCTCAGAGAGGAGTAGCA--GGTGGCAAAGAACATCAGG-GAAA-AAAGCTAGAAGGAATATGTAGG----CACCTTTGACCTGAAATAGA---------GAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2375626 95 - 204787373 AAAAGCAGCTCAGAGAGGAGTAGCA--GGTGGCAAGAAACATCAGG-GGAACAAAGCTAGAAGGAACATGTAGG----CACCTTTGACCTGAAATAga---------cagg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192441901 95 - 192460366 AAAAGCAGCTCAGAGAGGAGTAGCA--GGTGGCAAGAAACATCAGG-GGAACAAAGCTAGAAGGAATATGTAGG----CACCTTTGACCTGAAATAga---------cagg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19180910 95 - 19675229 AAAAGCAGCTCAGAGAGGAGTAGCA--GGTGGCAAGAAACATCAGG-GGAACAAAGCTAGAAGGAACATGTAGG----CACCTTTGACCTGAAATAga---------cagg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16419767 95 - 16847902 AAAAGTAGCTCAGAGAGGAGTAGCA--GGTGGCAAGGAACATCAGG-GGAACAAAGCTAGAAGGAACATGTAGG----CACCTTTGACCTGAAAGAga---------cagg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91386961 95 + 91754291 AAAAGTAGCTCAGAGAGGAGTAGCA--GGTGGCAAGGAACATCAGG-GGAACAAAGCTAGAAGGAACATGTAGG----TACCTTTGACCTGAAATAGA---------CCGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1458588 95 + 1977891 AAAAGTAGCTCAGAGAGGAGTAGCA--GGTGGCAAGGAACATCAGG-GGAACAAAGCTAGAAGGAACATGTAGG----CACCTTTGACCTGAAAGAga---------cagg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7393830 95 - 7796314 aaaaGTAGCTCAGAGAGGAGTAGCA--GGTGGCACGGAACATCAGG-GAAACAAAGCTAGAAGGAACATGTGGG----CATCTTTGACCTGAAATAga---------cagg i colAng1.NW_012118932v1 I 312 C 0 s calJac3.chr17 73872061 94 + 74750902 AAAAGTAGCTCAGAGAGGAGTAGCA---GTGGCAAGG-ACATCA-T-GAAACAAAGCTAGAAG--ACGCGTA-G----CACCTTTGACCTGATCTCAGATTGTCAAG---- i calJac3.chr17 C 0 I 68 s saiBol1.JH378146 17308437 90 - 17725628 AAAAGTAGCTCAGAGAGGAGTAGCA--GGTGGCAAGGAACATCA-G-GAAACAAAGCTAGAAGGAACATGTAGG----CACCTTTGACCTGAAatagg------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6401771 90 + 6778120 AAAAGTAGCTCAGAGAGGAGTAGCA--GACGGCAAGGAATATCA-G-GAAACAAAGCCAGAAGGAACATGTGGG----CACCTTTGACCTGAACtagg------------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 37316 90 + 69927 AAAAGTAGCTCAGAGAGGAGCAGCA--GGTGGCAAGGAACATCA-G-GAAACAAAGCTAGAAGGAACATATAGG----CACCTTTGACCTGAAACAGG------------- i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88406352 97 + 114275543 CAAAGTGGCCCAGAGGGGAGCAGCA--GGTGGCAAGGAGCACTGAG-GAAAC--AGCTAGGAGGAATATGCAGGTAGACACTTTTGACACAAAATAga---------caga i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14810358 99 - 22200726 CAAAGTGGCCCAGAGGGGAGCAGCA--GGTGGCAAGGAGCACTGGG-GAAACAAAGCTGGGAGGAACATGCAGGCAGGCACTTTTGACACAAAATGga---------caga i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 225709 95 + 608964 GAAAATGCCTCAGAGGGGAGCAGCA--GCTGGCAAGGAGCACTGAG-AAAACAAAGCTGGGAGGAACATGCAAG----CGCTTTTGATACAAAAGAAA---------TAGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32806507 78 + 98207768 AAGAGAGGCTTGGGGGAGAGCAGCA--GGTG------------------AAGGGAGTCGAGAGGAACGTGAAGA----AGTTTTGAGCGTGAAATGCA---------TAGA i mm10.chr16 C 0 C 0 s canFam3.chr33 2340171 96 - 31377067 GAAAGTAGCTCAGAGGGGAGCAGCAGGGGTGGGGTGGGGTGGGGGGTGAGACAAAGCTGGGAGGAACGTG--GG----CACTTTTGACATGAAATGga---------caaa i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2719477 54 - 6579706 I a score=329672.000000 s hg38.chr3_KI270934v1_alt 84547 23 + 163458 ATG-ca-agatct-caggattgtcag s panTro5.chr3 2556584 23 - 202621043 ATG-ca-agatct-caggattgtcag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 145465 23 - 190779 ATG-ca-agatct-caggattgtcag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 99330 23 - 106623 ATG-ca-agatct-caggattgtcag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2871124 23 - 123690457 ATG-ca-agatct-caggattgtcag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2375721 23 - 204787373 atg-ca-agatct-caggattgtcag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192441996 23 - 192460366 atg-ca-agatct-caggattgtcag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19181005 23 - 19675229 atg-ca-agatct-caggattgtcag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16419862 23 - 16847902 atg-ca-agatct-caggattgtcag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91387056 23 + 91754291 ATG-ca-agatct-caggattgtcag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1458683 23 + 1977891 atg-ca-agatct-caggattgtcag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7393925 23 - 7796314 atg-ca-agatct-caggattgtcag i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17308527 23 - 17725628 atg-ca-agatct-caggattgtcag i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6401861 23 + 6778120 atg-ca-agatct-caggattgtcag i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 37406 23 + 69927 AGG-ca-aggtct-caggattgtcag i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88406449 24 + 114275543 atg-cacagatct-caagattgttag i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14810457 24 - 22200726 atg-cacggatct-caggattgtcag i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 225804 24 + 608964 GTA-CAAGGATCT-CAGGATTGTCAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32806585 24 + 98207768 CTA-TA-AGAACTGCAGGACCATCAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2340267 24 - 31377067 atgtca-ggatcc-cagaattgtcag i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2719477 54 - 6579706 I e calJac3.chr17 73872155 68 + 74750902 I a score=1761958.000000 s hg38.chr3_KI270934v1_alt 84570 130 + 163458 ggaccttaggaaccatctaggccacatcccggctttggcctgaagtgcaggcaaagggtttgcctctgccagccatcgcatccagCTTTGCTGTAGGTGGAATCGGGCCTGTATGTGAGTTACCAGGGTT s panTro5.chr3 2556607 130 - 202621043 ggaccttaggaaccatctaggccacatcccGGCTTTGGCCTGAAGTGCAGGCAAAGGGTTTGCCTCTGCCAACCATAGCATCCAGCTTTGCTGTAGGTGGAATCAGGCCTGTATGTGAGTTACGAGGGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 145488 130 - 190779 ggaccttaggaaccatctaggccacatcccggctttggcctgaagtgcaggcaaagggtttgcctctGCCAACCATAGCATCCAGCTTTGCTGTAGGTGGAATCAGGCCTGTATGTGAGTTACGAGGGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 99353 130 - 106623 ggaccttaggaaccatctaggccacatcccGGCTTTGGCCTGAAGTGCAGGCAAAGGGTTTGCCTCTGCCAACCATAGCATCCAGCTTTGCTGTAGGTGGAATCAGGCCTGTATGTGAGTTACGAGGGTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2871147 130 - 123690457 ggaccttaggaaccatctaggccacatcctggctttggcCTGAAGTGCAGGCAAAGGGCTTGCCTCTGCCAACCATAGCATCCAGCTTTGCTGTAGGTGGAATCAGGCCTGTATGTGAGTTACCAGGGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2375744 130 - 204787373 ggaccttaggaaccatctaggtcgcatcccGGCTTTGGCCTGAAGTGCAGGCAAACGGCTTGGCTCTGCCAACCACAGCATCCAGCTTTGCTGTGGGTGGGACCGGACCTGTGTGTGAGTTACCAGGGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192442019 130 - 192460366 ggaccttaggaaccatctaggtcgcatcccGGCTTTGGCCTGAAGTGCAGGCAAACGGCTTGGCTCTGCCAACCACAGCATCCAGCTTTGCTGTGGGTGGGACCGGACCTGTGTGTGAGTTACCAGGGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19181028 130 - 19675229 ggaccttaggaaccatctaggtcgcatcccGGCTTTGGCCTGAAGTGCAGGCAAACGGCTTGGCTCTGCCAACCACAGCATCCAGCTTTGCTGTGGGTGGGACCGGACCTGTGTGTGAGTTACCAGGGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16419885 130 - 16847902 ggaccttaggaaccatctaggtcacatcccGGCTTTGGCCTGAAGTGCAGGCAAAGGGCTTGGCTCTGCCAACCACAGCATCCAGCTTTGCTGTGGATGGAACCGGACCTGTGTGTGAGTTACCAGGGTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91387079 130 + 91754291 ggaccttaggaaccatctaggtcacatcccGGCTTTGGCCTGAAGTGCAGGCAAAGGGCTTGCCTCTGCCAACCACAGCATCCAGCTTTGCCGTGGGTGGAAACAGACCTGTGTGTGAGTTACCAGGGTT i chlSab2.chr15 C 0 I 2237 s manLeu1.NW_012102020v1 1458706 130 + 1977891 ggaccttaggaaccatctaggtcacatcccGGCTTTGGCCTGAAGTGCAGGCAAAGGGCTTGGCTCTGCCAACCACAGCATCCAGCTTTGCTGTGGATGGAACCGGACCTGTGTGTGAGTTACCAGGGTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7393948 129 - 7796314 ggaccttaggaaccatcgagGTGACA-CCCGGCTTTGGCCTGAAGTGCAGGCAAAGGGCTTGCCTCTGCCAACCGTAGCATCCGGCTTTGCTGTGGGTGGAAACAGACCTGTGTGTGCGTTACCAGGGTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73872223 130 + 74750902 GGGCCTTTGGAACCATCCAGGGCACGTCCCAGCTTTGGCCTGACATGCAGGCAAAGGGCTCGCCTCTGCCAACCACAGCATGCAGCTTTGCTGTAGGTGGAAACAAGCCTACATGTGAGTTACCAGGGTT i calJac3.chr17 I 68 C 0 s saiBol1.JH378146 17308550 130 - 17725628 ggaccttaggaaccatccagGGTATGTCCTGGCTTTGGCCTGACATGCAGGCAAAGGACTCGCCTCTGCCAACCACAGCATCCAGCTTTGCTGTGGGTGGAAACAAGCCTACATGTGAGTTACCAGGGTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6401884 130 + 6778120 ggaccttaggaactatccagGGCACGTCCCGGCTTTGGCCTGACATGTAGGCAAAGGGCTCGCCTCTGCCAACCACAGCATCCAGCTTTGCTGTGGGTGGAAACAAGCCTACATATGAGTTACCAGGGTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 37429 130 + 69927 ggaccttaggaaccatccagtgcacgtcccGGCCTTGGCCTGACATGCAGGCAAAGGGCTCGCCTCTGCCAACCACAGCGTCCAGCTTTGCTCTGGGTGGAAACAAGCCTACGTGTGAGTTACCAGGGTT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88406473 130 + 114275543 ggaccttaggagccatccagtccaCATACTGGCCTTGCCCTAAAGTACAAGCAAAGAGCTTGCCTCTCTCTACTGCAGCCTCCAGCTCTGCCACGAGTGGAAATGAGCCTGCATGTGAGCTGTCAGGGTT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14810481 130 - 22200726 ggaccttaggagccatccagtccacacgctggccttggcctacagtacgagcaaaGAGCTTGCCTCTCTCTACCGCAGCATCCAGCTCTGCCGTGCGTGGAAATGAGCCTGCATGTGAGCCATCAGGGTT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 225828 130 + 608964 GGACCTGTAGAGCCATGCAGTCCACATGCTGGCCTGAGCCTAAAGTCCAGGCAAAGAGCTTGCCTCTCTCTCCTGCTGTATTTGGCTCTGCTGTGAGTGGAACTGAGCCTGCATGGGGGTGATCAGGGTT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32806609 118 + 98207768 -GATGT--GGTGCCACCCACTCCATA--GCGGCCACCATCTAAAGTCCAGGC-------TTGCCTCTGTGGGTTACAGCATCCAGCTGAGCCACGGGTGGAAGAGAGCCTGCATGCAGGTCACTGGAGTT i mm10.chr16 C 0 C 0 s canFam3.chr33 2340291 125 - 31377067 gcacctccggggccttccagtccacacctgggccttggcctgaggcGC--GTGGACGGGCCGCCTCTGTCCATCACAGCACCCAGCCCCGCCG--GGTGGGAAGGAGCTGGCGTGTGA-TTACCTGGGTG i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2719477 54 - 6579706 I a score=50483.000000 s hg38.chr3_KI270934v1_alt 84700 3 + 163458 GCA s panTro5.chr3 2556737 3 - 202621043 GCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 145618 3 - 190779 GCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 99483 3 - 106623 GTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2871277 3 - 123690457 GCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2375874 3 - 204787373 Gca i rheMac8.chr2 C 0 I 2559 s macFas5.chr2 192442149 3 - 192460366 Gca i macFas5.chr2 C 0 I 2558 s macNem1.NW_012014355v1 19181158 3 - 19675229 Gca i macNem1.NW_012014355v1 C 0 I 2596 s cerAty1.NW_012004056v1 16420015 3 - 16847902 Gca i cerAty1.NW_012004056v1 C 0 I 5020 s manLeu1.NW_012102020v1 1458836 3 + 1977891 Gca i manLeu1.NW_012102020v1 C 0 I 2926 s colAng1.NW_012118932v1 7394077 3 - 7796314 Gca i colAng1.NW_012118932v1 C 0 I 2213 s calJac3.chr17 73872353 3 + 74750902 GCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17308680 3 - 17725628 GCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6402014 3 + 6778120 GCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 37559 3 + 69927 GCA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88406603 3 + 114275543 GCA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14810611 3 - 22200726 GCA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 225958 3 + 608964 GCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32806727 3 + 98207768 GCA i mm10.chr16 C 0 C 0 s canFam3.chr33 2340416 3 - 31377067 GCG i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2719477 54 - 6579706 I e chlSab2.chr15 91387209 2237 + 91754291 I a score=1001469.000000 s hg38.chr3_KI270934v1_alt 84703 144 + 163458 GAGGACACTGTGGTCTGGGTGGCAGTCTGGTGCCACATGGCAGAATTCATCACAGTAGCAACTTCCCCTCTTGCAGCGGTGATCCGTCCCAAGACAGCAAAGGTTCTGGGGTTGGGAGCAGCTGCCTGGAGAAAAAGGAACA-TT s panTro5.chr3 2556740 144 - 202621043 GAGGACACTGTGGTCTGGGTAGCAGTCTGGTACCACATGGCAGAATTCATCACAGTAGCAACTTCCCCTCTTGCAGTGGTGATCTGTTCCAAGACAGCAAAGGTTCTGGGGTTGGGAACAGCTGCCTGGagaaaaaggaacg-tt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 145621 144 - 190779 GAGGACACTGTGGTCTGGGTAGCAGTCTGGTACCACATGGCAGAATTCATCACAGTAGCAACTTCCCCTCTTGCAGTGGTGATCCGTTCCAAGACAGCAAAGGTTCTGGGGTTGGGAACAGCTGCCTGGagaaaaaggaacg-tt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 99486 142 - 106623 GAGGACACTGTGGTCTGGGTAGCAGTCTGGTACCACATGGCAGAATTCATCACAGTAGCAACTTCCCCT-TTGCAGTGGTGATCTGTTCCAAGACAGCAAAGGTTCT-GGGTTGGGAACAGCTGCCTGGAGAAAAAGGAACG-TT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2871280 144 - 123690457 GAGGACACTGTGGTCTGGGCAGCAGTCTGGTACCACATGGCAGAATTCACCACAGTAGCAACTTCCCCTCTTGCAGTGGTGATCCGTTCCAAGACGGCAAAGGTGCTGGGGTTGGGAGCAGCTGCCTGGAGAAAAAGGAACG-TT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73872356 144 + 74750902 GAGGAGACTGTAGTCTGGGCAGCAGTCTGGTACCACATGGCAGAATTCATCACAGTAGCAACCTCCCCTCTTGCAGTGGTGATCTGTTCCAAGACAGCAAAGGCGCTGGGGTTGGGAGCAGCTGCCTGGAGAACAAGGAACA-TT i calJac3.chr17 C 0 I 4 s saiBol1.JH378146 17308683 145 - 17725628 GAGGACACTGTGGTCTGGGCAGCAGTCTGGTACCACATGGCAGAATTCATCACAGTAGCAACCTCCCCTCTTGCAGTGGTGATCTGTTCCAAGACAGCAAAGGCGCTGGGGTTGGGAGCAGCTGCCTGGAGAAAAAGGAATATTT i saiBol1.JH378146 C 0 I 4 s cebCap1.NW_016107444v1 6402017 144 + 6778120 GAGGACACTGTGGTCTGGGCAGCAGTCTGGTACCACATGGCAGAATTCATCACAGTAGCAACCTCCCCTCTTGCAGTGGTGATCTGTTCCAAGACAGCAAAGGCGCTGGGGTTGGGAGCAGCTGCCTGGAGAAAAAGGAATA-TT i cebCap1.NW_016107444v1 C 0 I 15 s aotNan1.NW_018503669v1 37562 144 + 69927 GAGGACACTGTGGTCTGGGCAGCAGTCTGGTACCACATGGCAGAATTCATCACAGTAGCAACCTCCCCTCTTGCAGTGGTGATCTGTTCCAAGACAGCAAAGGCGCTGGGGTTGGGAGCAGCTGCTTGGAGAAAAAGGAACA-TT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88406606 144 + 114275543 GAGGGCACTGTGGTCTGGGCAGCAATCTAGTACCACATGGCAGAATTCATCACAATAGCAGCTTCCCCTCTTGCAGTGGTGATCTGTTCCAAGGCAGCAGAGGACCTGGGGTTGGGAGCAACTGCCTAGAGAAAAAGGGGCA-TT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14810614 144 - 22200726 GAGGGCACTGTGGTCTGGGCAGCAGTCTGGTACCACATGGCAGAATTCATCACAGTAGCAGCTTCCCCTCTTGCAGTGGTGATCTGTTCCAAGGCAGCAGAGGAGCTGGGGTTGGGAGCAACTGCCTAGAGAAAAAGGGACA-TT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 225961 144 + 608964 GAGGGCACTGTGGTCTGGGCAGCAGTCTGGTACCACATGGCAGAATTCATCACAGTAGCAGCTTTCCCTCTTGCAGTGGTGATCTGTCCCCAGGCAGCAGAGGAGCTGGGGTTGGGAGCAACTTCCTAAAGAAAGAGGGACA-TT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32806730 144 + 98207768 GAGGGTCTCGTGGTCTGGGCAGCAGTCTGATAGCACACGGCAGAATTTATCACAATAGCAGTTTCCTCTCTTGCAGCCATAATCCTCTCCGGGGCAGCAGAGAGGCTGGGGCTGGGAACAACTGCCTGGAGGAGAGGAGACA-TT i mm10.chr16 C 0 I 1 s canFam3.chr33 2340419 140 - 31377067 GAGGGCACGGTGGCCTGGGCAGCAGTGTGATGCCACGTGGCAGGATTCGTCACA-CAGCAGCTTCCTCTCCTGCGATGGTG-TCTGATCCGGGGCAGCAGACGGGC-GGGGTTGGGAGCAGCTGCCTGCAG-AGAAGGGACA-TG i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=6498.000000 s hg38.chr3_KI270934v1_alt 84847 3 + 163458 AAA s panTro5.chr3 2556884 3 - 202621043 aaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 145765 3 - 190779 aaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 99628 3 - 106623 aaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2871424 3 - 123690457 aaa i nomLeu3.chr11 C 0 C 0 s micMur3.chr1 88406750 3 + 114275543 AAA i micMur3.chr1 C 0 I 2151 s proCoq1.NW_012133858v1 14810758 3 - 22200726 AAA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 226105 3 + 608964 AAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32806875 2 + 98207768 AA- i mm10.chr16 I 1 C 0 s canFam3.chr33 2340559 3 - 31377067 AGA i canFam3.chr33 C 0 C 0 e aotNan1.NW_018503669v1 37706 0 + 69927 C e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17308828 4 - 17725628 I e calJac3.chr17 73872500 4 + 74750902 I e cebCap1.NW_016107444v1 6402161 15 + 6778120 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=6552.000000 s hg38.chr3_KI270934v1_alt 84850 2 + 163458 AA s panTro5.chr3 2556887 2 - 202621043 aa i panTro5.chr3 C 0 I 11 s panPan2.chrUn_NW_014024201v1 145768 2 - 190779 aa i panPan2.chrUn_NW_014024201v1 C 0 I 11 s gorGor5.CYUI01000576v1 99631 2 - 106623 aa i gorGor5.CYUI01000576v1 C 0 I 11 s nomLeu3.chr11 2871427 2 - 123690457 aa i nomLeu3.chr11 C 0 I 9 s proCoq1.NW_012133858v1 14810761 2 - 22200726 AA i proCoq1.NW_012133858v1 C 0 I 2330 s otoGar3.GL873829 226108 2 + 608964 aa i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32806877 2 + 98207768 AA i mm10.chr16 C 0 C 0 s canFam3.chr33 2340562 2 - 31377067 AA i canFam3.chr33 C 0 C 0 e aotNan1.NW_018503669v1 37706 0 + 69927 C e micMur3.chr1 88406753 2151 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17308828 4 - 17725628 I e calJac3.chr17 73872500 4 + 74750902 I e cebCap1.NW_016107444v1 6402161 15 + 6778120 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=-9448.000000 s hg38.chr3_KI270934v1_alt 84852 7 + 163458 -AAA----Aaaa s panTro5.chr3 2556900 7 - 202621043 -aaa----gaaa i panTro5.chr3 I 11 C 0 s panPan2.chrUn_NW_014024201v1 145781 7 - 190779 -aaa----gaaa i panPan2.chrUn_NW_014024201v1 I 11 C 0 s gorGor5.CYUI01000576v1 99644 6 - 106623 -aaa-----aaa i gorGor5.CYUI01000576v1 I 11 C 0 s nomLeu3.chr11 2871438 7 - 123690457 -aaa----aaaa i nomLeu3.chr11 I 9 C 0 s calJac3.chr17 73872504 4 + 74750902 --------aaaa i calJac3.chr17 I 4 C 0 s saiBol1.JH378146 17308832 4 - 17725628 --------aaaa i saiBol1.JH378146 I 4 C 0 s aotNan1.NW_018503669v1 37706 8 + 69927 ----TTTTTaaa i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 226111 7 + 608964 -aga----caga i otoGar3.GL873829 I 1 I 2819 s mm10.chr16 32806879 7 + 98207768 -AGA----CAGA i mm10.chr16 C 0 I 716 s canFam3.chr33 2340564 7 - 31377067 GAGA----CAG- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e micMur3.chr1 88406753 2151 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e cebCap1.NW_016107444v1 6402161 15 + 6778120 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=3276.000000 s hg38.chr3_KI270934v1_alt 84859 1 + 163458 a s panTro5.chr3 2556907 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 145788 1 - 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 99650 1 - 106623 a i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2871445 1 - 123690457 a i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73872508 1 + 74750902 a i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17308836 1 - 17725628 a i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 37714 1 + 69927 a i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 2340571 1 - 31377067 A i canFam3.chr33 C 0 I 862 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e micMur3.chr1 88406753 2151 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e cebCap1.NW_016107444v1 6402161 15 + 6778120 I e otoGar3.GL873829 226118 2819 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=10377.000000 s hg38.chr3_KI270934v1_alt 84860 7 + 163458 aagatta s panTro5.chr3 2556908 7 - 202621043 aagatta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 145789 7 - 190779 aagatta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 99651 6 - 106623 aaGATT- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2871446 7 - 123690457 aagatta i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73872509 7 + 74750902 tagacta i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17308837 7 - 17725628 tagatta i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 37715 7 + 69927 tagatta i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e micMur3.chr1 88406753 2151 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e cebCap1.NW_016107444v1 6402161 15 + 6778120 I e canFam3.chr33 2340572 862 - 31377067 I e otoGar3.GL873829 226118 2819 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=1173508.000000 s hg38.chr3_KI270934v1_alt 84867 459 + 163458 aaattagccaggt-atg-------------gtggtgcacgcctgtagtcccagctacccaggaggctgagacagga-gatcacttgagcccagacgca-ggaagctgaagtgagccatgatcacaccagcgcacttcagcctgggtgacagagcaagaccctgtctcaaaaaaaaaaaaaaa-------------------------------------------------aaaaaaaa---------------------aaggaaaAgaaaagatagatttaacaaatggtgcttagacaactggataagcacatgcaaaagaatgcatttggactcctacctcaaaccatatacaaatattaactcaaaatggaccatagacctaaatgtaagagctgaaactggctgggtgcggtggctcatgcctgtaatcccagcactttgggagaccaaggcaggcagatcacttgaggccaggagttcaaca-------ccagcctggccaacatggtgaaaccc--gtctctactaaaaacacaaaaat---------tagctgg s panTro5.chr3 2556915 469 - 202621043 aaattagccaggt-atg-------------gtggtgcatgcctgtagtcccggctaccccggaggctgagatagga-gatcacttgagcccagaagca-ggaaactgaagtgagccatgatcacaccagtgcagttcagcctgggtgacagagcaagaccctgtctcaaaataaaaaaaaaa-----------------------------------------aagaaaagaaaaagaa---------------------aaagaaaagaaaagatagatttaacaaatggtgcttggacaactggataagcacatgcaaaagaatgcatttggactcctacctcacaccatatacaaatattaactcaaaatggaccatagacctaaatgtaagagctgaaactggctgggtgtggtggctcatgcctgtaatcccaacactttgggagaccaaggaaggcagatcgcttgaggccaggagttcaaga-------ccagcctggccaacatggtgaaacccctgtctcgactaaaaatacaaaaat---------tagctgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 145796 467 - 190779 aaattagccaggt-atg-------------gtggtgcatgcctgtagtcccggctaccccagaggctgagatagga-gatcacttgagcccagaagca-ggaaactgaagtgagccatgatcacaccagtgcagttcagcctgggtgacagagcaagaccctgtctcaaaataaaaaagaaa------------------------------------------agaaaagaaaaagaa---------------------aaagaaaagaaaagaTAGAtttaacaaatggtgcttggacaactggataagcacatgc-aaagaatgcatttggactcctacctcacaccatatacaaatattaactcaaaatggaccacagacctaaatgtaagagctgaaactggctgggtgtggtggctcatgcctgtaatcccagcactttgggagaccaaggaaggcagatcgcttgaggccaggagttcaaga-------ccagcctggccaacatggtgaaacccctgtctcgactaaaaatacaaaaat---------tagctgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 99657 461 - 106623 aaattagccaggtaatg-------------gtggtgcatgcctgtagtcccggctaccctggaggctgagacagga-gat-acttgag--cagaagcagggaagctgaagtgag-catgatcacaccagtgcacttcagcctgggtgacagagcaagaccctgtctcaaaaaaaaaaaaaaa---------------------------------------------aaaaaaaagaaa---------------------aaagaaaaagaaaGATAGAtttaataaatggtgcttggacaactggataagcacatgc-aaaatatgcatttggactcctacctcac-ccatatacaaatattaactcaaaatggaccataaacctaaatgtaagagctgaaactggctgggtgtggtggttcatgcctgtaatcccagcactttgggagaccaaggaaggcagattgcttgaggccaggagttcaaga-------ccagcctggccaacatggtgaaacccctgtctctactaaaaatacaaaaga---------tagctgc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2871453 458 - 123690457 aaatt---------atg-------------gtggtgcgtgcctgtagtcctggctacccaggaggctgagatagga-gatcacttgagcccagaaaca-ggaagttgaagtgagccatggtcataccagtgcacttcagcctggatgacagagcaagatcctgtctcaaaaaaaaaaaaaag--------------------------------------------aaaagaaaaagaa---------------------aaagaaaagaaaagatagatttaacaaatggtgcttggacaactggataagcacatgcaaaagaatgcatttggactcctacctcacaccatatacaaatattaactcaaaatggaccatagacctaaatgtaagagctgaaactggctgggtgtggtggctcatgcctgtaatcccagcactttgggagactgaggcaggcagatcacttgaggccaggagttcaaga-------ccagcctggcaaacatggtgaaacccctgtccctactaaaaatacaaaaat---------tagctgg i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73872516 461 + 74750902 aaattagccaggt-gtg-------------gtggtacatgcctatagtcccagctacccagggggctgaggtaggaggagcacttgagcccagaagct-ggaagctgaaatgagccatgatcacaccactgcacttcagcctaggtgacagagcaagaccctgtctcaaaaaaa-------------------------------------------------agaaaaagaaacaaag---------------------aaagaaaAgaaaagatagatttaacaaatggtgcttggacaactggataagcacatgcaagagaatgcatttggacccctacctcacaccgtatacaaatattaactcaaaatgtaccaaagacctaaatgtaagagctgaaactggccagtcatggtggctcacacctgtaatcttaacactttgagagacaaagacaggcagatcacttgaggccaggagttcaaga-------ccagcctggccaacatggtaaaactcc-atctctactaataatacaaaaat---------tagctga i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17308844 481 - 17725628 aaattagccaggt-gtg-------------gtggtgcatgcctatagtcccagctacccagggggctgaggtaggaggagcacttgagc-------ct-ggaagctgaactgagccatgatcgcaccactgcacttcagcctaagtgacagagcaagacactgtctcaaaaaaaaaaaaaaa---------------------aaaaaaaaaa--aagaaaagaaaaaaagaaacaaagaaagaaagaaaaagaaac---aaagaaaagaaaaggtagatttaacaaatggtgattggtcagctggataagcacatgcaagagaatgcatttggacccctgcctcacaccatatacaaatattaacttgaaatgtaccaaagacctaaatgtaacagctgaaactggccaggcatggtggctcacacctgtaatcttaatactttga---------------------------gccaagattgcacaactgcactccagtctggacaacagagcaagactct-ttc------aaaaaaataaaaataaaGGGGggtagctgg i saiBol1.JH378146 C 0 I 8124 s cebCap1.NW_016107444v1 6402176 502 + 6778120 aaattagccaggt-gtggtggtgcatgcctgtggtgcatgcctatagtcccagatacccagggggctgaggtaggaggagcatttgagcccagaagtt-ggaagctgaactgagccatgatcacaccactgcacttcaacctaagtgacagagcaagaccctgtctcaaaaaaaaaaaaaaa---------------------aaaaaaaaaaggaaaGAAGGaaagaaacaaacaaag---------------------aaagaaaagaaaaggtagatttaacaaacagtgcttggacaactggataagcacatgcaagagaatgcatttggacccctacctcacactgtatacaaatattaactcaaaatgtaccaaagacctaaatgtaacagctgaaactggccaggcatggtggctcacacctgtaatcttaatactttgagagacaaagacaggcagatcacttgaggccaggagttcaaga-------ccagcctggccaacatggtaaaactcc-atctctactaataatacaaaaat---------tagctga i cebCap1.NW_016107444v1 I 15 C 0 s aotNan1.NW_018503669v1 37722 530 + 69927 aaattagccaggt-gtg-------------gtggtgcgtgcctatagtcccagctacccagggagctgaggtaggaggagcacttgagcccagaagct-ggaagctgaaatgagccataatcacaccactgcacttcagcctaggtgacagagcaagaccctgtatcaaaaaaagaaagaaaggaagaaagaaagaaacagagaaagaaagaaagagagagagaaaggaagaaagaaagaaagaaagaaagagaaaaatgaagaaagagaaaagatagatttaacaaacagtgcttggacagctggataagcacatgcaagagaatgcatttgga-ccctacctcacaccatatacaaatattaactcaaaatgtaccaaagacctaaatgtaagagctgaaactggccaggcatggtggctcacacctgtaatcttaacactttgagagacgaagacaggcagatcgcttgaggccaggagttcaaga-------ccagcctggccaacatggtaaaactcc-atctctactaataatacaaaaat---------tagctga i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e micMur3.chr1 88406753 2151 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e canFam3.chr33 2340572 862 - 31377067 I e otoGar3.GL873829 226118 2819 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=287433.000000 s hg38.chr3_KI270934v1_alt 85326 129 + 163458 gcttggtagcatgcacctatagtcccagctactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgcagtgagccaagattgcacaactgcactccagcct-gggcaacagagca s panTro5.chr3 2557384 129 - 202621043 gcttggtagcatgcacctatagtcccagctactcaggaggctgaggcaggagaactgcttgaacccaggaggtggaggttgcagtgagccaagattgcacaactgcactccagcct-gggcaacagagca i panTro5.chr3 C 0 I 224 s panPan2.chrUn_NW_014024201v1 146263 129 - 190779 gcttggtagcatgcacctatagtcccagctactcaggaggctgaggcaggagaactgcttgaacccaggaggtggaggttgcagtgagccaagattgcacaactgcactccagcct-gggcaacagagca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 100118 128 - 106623 gctt-gtagcatgcacctatagtctcagctactcaggaggctgaggcaggagaattgcttgaa-ccaggaggtggaggttgcagtgagccaagattgcacaactgcactccagcctggggcaacagagca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2871911 129 - 123690457 gcatggtagcatgcacctatagtcccagatactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgcagtgagccaagattgcacaactgcactccagcct-gggcagcagagca i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73872977 128 + 74750902 gcgtggtggtgagca-caacagtcccagctacttgggaggctaaggcaggagaattgcttgaacccaggaggtgaaggttgctgtgagccaagattgcacaactgcactccagcct-ggacaacagagca i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 6402678 128 + 6778120 gtgtggtggtgggca-tgatagtcccagctacttgagaggctaaggcaggagaattgcttgaatccaggagggggaggttgcagtgagccaagattgcacaactgtactccagcct-ggacaacagagca i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 38252 128 + 69927 gtgtggtggtgggca-tgatagtcccagctacttgggaggctaaggcgggagaattgcttgaacccaggaggtggaggttgcagtgagccaagattgcacaactgcactccagcct-ggacaacagaaca i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e micMur3.chr1 88406753 2151 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17309325 8124 - 17725628 I e canFam3.chr33 2340572 862 - 31377067 I e otoGar3.GL873829 226118 2819 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=17094.000000 s hg38.chr3_KI270934v1_alt 85455 7 + 163458 agactct s panTro5.chr3 2557737 7 - 202621043 agactct i panTro5.chr3 I 224 C 0 s panPan2.chrUn_NW_014024201v1 146392 7 - 190779 agactct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 100246 7 - 106623 agactct i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2872040 7 - 123690457 agaatct i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73873105 7 + 74750902 agactct i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 6402806 7 + 6778120 agactct i cebCap1.NW_016107444v1 C 0 I 7796 s aotNan1.NW_018503669v1 38380 7 + 69927 agactct i aotNan1.NW_018503669v1 C 0 I 7711 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e micMur3.chr1 88406753 2151 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17309325 8124 - 17725628 I e canFam3.chr33 2340572 862 - 31377067 I e otoGar3.GL873829 226118 2819 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=24609.000000 s hg38.chr3_KI270934v1_alt 85462 30 + 163458 gcctccaaaataaataaataaataaaaata s panTro5.chr3 2557744 30 - 202621043 gcctccaaaaaaaataagtaaataaaaata i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146399 29 - 190779 gcctccaaaa-aaataagtaaataaaaata i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 100253 28 - 106623 gcctccaaaa-aaataagtaaat-aaaata i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2872047 30 - 123690457 gcctccaaaataaataaataaataaaaata i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73873112 30 + 74750902 atttcaaaaaaataaaaataaaCAGGggta i calJac3.chr17 C 0 I 9054 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17309325 8124 - 17725628 I e cebCap1.NW_016107444v1 6402813 7796 + 6778120 I e canFam3.chr33 2340572 862 - 31377067 I e otoGar3.GL873829 226118 2819 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=7121.000000 s hg38.chr3_KI270934v1_alt 85492 13 + 163458 aGTcaatcaaatt s panTro5.chr3 2557774 13 - 202621043 agtccatcaaatt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146428 13 - 190779 aGTCCATCAaatt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 100281 11 - 106623 aGTC-ATc-aatt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2872077 13 - 123690457 aGTcaatcaaatt i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17309325 8124 - 17725628 I e calJac3.chr17 73873142 9054 + 74750902 I e cebCap1.NW_016107444v1 6402813 7796 + 6778120 I e canFam3.chr33 2340572 862 - 31377067 I e otoGar3.GL873829 226118 2819 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=259830.000000 s hg38.chr3_KI270934v1_alt 85505 257 + 163458 taaaactggacaaaggatttaaatagacatttctccaaagaagatacacaagtggccagtgagcat---gaaagatactcaacatcattaatcat-aaggaaatgcaaatccaaaccacaatgagataccaccccacatccagtaggacggctaagataaaaa----ataaaacagcaagtgttggctgggtggggtggctcacacctgtaatcacggcacttgggaacactgagatgggtggatgacgagttcaggagtttgag s panTro5.chr3 2557787 257 - 202621043 taaaactggacaaaggatttaaatagacatttctccaaagaagatacacaagtggccagtgagcat---gaaagatactcaacatcattaatcat-aaggaaatgcaaatccaaaccacaatgagataccaccccacatccattaggacggctaagataaaaa----ataaaatagcaagtgttggctgggtgcagtggctcacacctgtagtcacagtactttggaacaccgagacgggtggatcatgagttcaggagtttgag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146441 257 - 190779 taaaactggacaaaggatttaaatagacatttctccaaagaagatacacaagtggccagtgagcat---gaaagatactcaacatcattaatcat-aaggaaatgcaaatccaaaccacaatgagataccaccccacatccattaggatggctaagataaaaa----ataaaatagcaagtgttggctgggtgcagtggctcacacctgtagtcacagtactttggaacaccgagacgggtggatcatgagttcaggagtttgag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 100292 251 - 106623 taaaactggacaaaggatttaaatagacatttctcc-aagaagatacac-agtggccagtgagcat---gaaagatactcaacatcattaatcat-aaggaaatgcaaatcc-aaccacaatgagata-caccccacatcc-ttaggacggctaagataaaaa----ataaaatagcaagtgttggct-ggtgcagtggctcacacctgtagtcacagtactttggaacaccgagacaggtggatcatgagttcaggagtttgag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2872090 257 - 123690457 taaaactggacaaaggatttaaatagacatttctccaaagaagatatacaagtggccagtgagcat---gaaagatattcaacatcattaataat-aaggaaatgcaaatccaaaccacaatgagataccaccccacatccattaggatggctaagataaaaa----ataaaatagcaagtgttggctgggtgcggtggctcacacctgtaatcacagcactttggaacactgagacgggtggatcacaagttcaggagtttgag i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 228937 208 + 608964 Taaaaatgtgcaaaggcttcaaatagacatttctccaaagaagatatacaaatagtccacaagcatatgaaaagatgcccaacattattcatcatcaagaaaatgcaaattaaaaccacaatgagataccacttcacacccattaggatggctaaaattaaaaagacagaaaataaccagcgt--------------------------------------ttatgagcat-------------------gttcagaaattggaa i otoGar3.GL873829 I 2819 I 668 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17309325 8124 - 17725628 I e calJac3.chr17 73873142 9054 + 74750902 I e cebCap1.NW_016107444v1 6402813 7796 + 6778120 I e canFam3.chr33 2340572 862 - 31377067 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=193759.000000 s hg38.chr3_KI270934v1_alt 85762 226 + 163458 accatcctggccagcatagtgaaaccc-gtctctactaaaaata-caaaaattagctgggtgtggtggcatgcacctgtagtcccagctactcaggaggctgaggcacgagaatctcttgaacccaggaggcagaggtcgcagtgagctgagatcacgccactgcactccagcctggcgacagagcgagaccccatctcaaaaaaaaaaaaaaaaaaagcaagt-gttg s panTro5.chr3 2558044 225 - 202621043 accatcctggccagcatagtgaaaccccgtctctactaaaaata-caaaaattagctgggtgtggtggcatgcacctgtagtcccagctactcaggaggctgaggcacgagaatctcttgaacccaggaggcagaggtcgcagtgagctgagatcacgccactgcactccagcctagcgacagagcgagaccccatctcaaaaaaaaaaaaaaaaa--gcaagt-gttg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146698 228 - 190779 accatcctggccagcatagtgaaaccccgtctctactaaaaata-caaaaattagctgggtgtggtggcatgcacctgtagtcccagctactcaggaggctgaggcacgagaatctcttgaacccaggaggcagaggtcgcagtgagctgagatcacgccactgcactccagcctagcgacagagcgagaccccatctcaaaaaaaaaaaaaaaaaaaaaaagtagttg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 100543 227 - 106623 accatcctggccagcatagtgaaaccc-gcctctactaaaaatagcaaaaattagctgggtgtggtggcatgcacctgcagtcccagctactcaggaggctgaggcacgagaatctcttgaacccaggaggcagaggtcacagtgagctgagatcatgccactgcactccagcctggcgacagagcgagaccccatctcaaaaaaaaaaaaaaaaaaagcaagt-gttg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2872347 219 - 123690457 accatcctggccagcacagtgaaaccccgtctctactaaaaata-caaaaattagctaggtgtggcagcatgcacctgtagtcccagctactcgggaggctgaggcacgagaatctcctgaacccagaaggcagaggtcgcagtgagctgagatcacgccactgcactccagcctggcaacagtgcgagaccccatctcaaaaaaaaaaa--------gcaagt-gttg i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17309325 8124 - 17725628 I e calJac3.chr17 73873142 9054 + 74750902 I e cebCap1.NW_016107444v1 6402813 7796 + 6778120 I e canFam3.chr33 2340572 862 - 31377067 I e otoGar3.GL873829 229145 668 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=332190.000000 s hg38.chr3_KI270934v1_alt 85988 338 + 163458 aagtgttgctgagggtgtggagaaattggaaccctcatacactgctggtggaattgcaaaatggtgcagccactttgaaaatcaatttggggagatgag-gtggcagcagaaaagaataaaaaaaaaaaagaa---aaaaaagaaaaacaatttgacag-tttctcagaatg-taaacatagag-ttgccatatgacccagaaaccctacttctgagcctgtagtt----------aggagaattaaaaacacatgttca-cacaaaaacctatcaatgaatattcatagcagtgttattcataatagccaaatagtagaaacaattcaaatgcccttcaactgatgaatggctaa s panTro5.chr3 2558269 340 - 202621043 aagtgttgctgagggtgtggagaaactggaaccctcatacactgctggtggaattgcaaaatggtgcagccactttgaaaatcaatttggggagatgag-gtggcagcagaaaataataaaaaaaagaaaaaa-gaaaaaaagaaaaacaatttgacag-tttctcagaatg-taaacatagag-ttgccatatgacccagaaaccctacttctgagcctgtagtt----------aggagaattaaaaacacatgttca-cacaaaaacctatcaatgaatattcatagcagtgttattcataatagccaaatagtagaaacaattcaaatgcccttcaactgatgaatggctaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146926 336 - 190779 aagtgttgctgagggtgtggagaaactggaaccctcatacactgctggtggaattgcaaaatggtgcagccactttgaaaatcaatttggggagatgag-gtggcagcagaaaataataaaaaaaaaaaga-----aaaaaagaaaaacaatttgacag-tttctcagaatg-taaacatagag-ttgccatatgacccagaaaccctacttctgagcctgtagtt----------aggagaattaaaaacacatgttca-cacaaaaacctatcaatgaatattcatagcagtgttattcataatagccaaatagtagaaacaattcaaatgcccttcaactgatgaatggctaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 100770 341 - 106623 aagtgttgctgagggtgtggagaaattgggaccctcatacactgcaggtggaattgcaaaatggtgcagccactttgaaaatcaatttggggagatgagtgtggcagcagaaaataataaaaaaaagaaaaaaagaaaaaaaagaaaacaatttgacagttttctcagaatg-taaacatagag-ttgccatatgacccagaa--cctacttctgagcctgtagtt----------aggagaattaaaaacacatgttcaccacaaaaacctatcaatg-atattcatagcaatgttattcataatagccaaatagtagaaacaattcaaatgcccttcaactgatgaatggctaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2872566 328 - 123690457 aagtgttgctgaggatgtggagaaattggaaccctcatacactactggtggaattgcaaaatggtgcagccactttgaaaatcaatttggggagatgag-gtggcagcagaaaagaataaaaaaa-----------aaaaaagaaaaacaatttgacag-tttctcagaatgttaaacacagag-ttgccatatgacccagaaaccctacttctgagcctgtagtt-------------agaattaaaaacacatgttca-catgaaaacctatcaatgaatattcatagcagagttattcataatagccaaatagtagaaacaattcaaatgcccttcaactgatgaatggataa i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 2341434 293 - 31377067 aagtgttggtgagaatgtggagaaatcggaaccc-cacacattgc---tggaattgaagcatggcgcagccactctggaa--------------------------------------------------------aacagaaaaaaacagtttggcag-atcctcagaatgtttaacagagtgaaaaccatatgatgcagcaagcccatttctgagtatatgaaaataaacccagaagagaaatgaaaataca-gtccc-cataaaaacctgtacataaatgttcaaaggagcattattcataagtaccccaaagtggaaacaaatcaaatgtttgtcagctgatgaatggataa i canFam3.chr33 I 862 I 194 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17309325 8124 - 17725628 I e calJac3.chr17 73873142 9054 + 74750902 I e cebCap1.NW_016107444v1 6402813 7796 + 6778120 I e otoGar3.GL873829 229145 668 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=35288.000000 s hg38.chr3_KI270934v1_alt 86326 32 + 163458 aactaaatctggtatatccatataatgggata s panTro5.chr3 2558609 32 - 202621043 aactaaatctggtatatccatataatggaata i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 147262 32 - 190779 aactaaatctggtatatccatataatggaata i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 101111 32 - 106623 aactaaatctggtatatccatataatggaata i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2872894 32 - 123690457 aactaaatctggtatatccgtataatggaata i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 2341921 32 - 31377067 aacaaactatggtacccctacacagtgggata i canFam3.chr33 I 194 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17309325 8124 - 17725628 I e calJac3.chr17 73873142 9054 + 74750902 I e cebCap1.NW_016107444v1 6402813 7796 + 6778120 I e otoGar3.GL873829 229145 668 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=387618.000000 s hg38.chr3_KI270934v1_alt 86358 271 + 163458 ttactcagccataaaaaggaatgaagtacagatgcatgccacaacaacaatgaaacttgaaa--acatgctaagtgaaagaagccactcacaaaaggccgtgtatt-gtatgattccatttatatgaaatgtttagaatagacaaatccatcaagacagaaagtatattagtggttgcca-ggggctggtgagatgtgtggaccaggcagtgactgctgatgggt-cagagtttatttggggcataacaaacatgttctgaaattagacagaggtg s panTro5.chr3 2558641 272 - 202621043 ttactcagccataaaaaggaatgaagtacagatgcatgccacaacaacaatgaaacttgaaa--acatgctaagtgaaagaagccactcacaaaaggccgtgtatt-gtatgattccatttatatgaaatgtttagaatagacaaatccatcaagacagaaagtacattagtggttgcca-ggggctggtgagatgtgcggactaggcagtgactgctgatgggtacagagtttatttggggcataacaaacatgttctgaaattagacagaggtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 147294 272 - 190779 ttactcagccataaaaaggaatgaagtacagatgcatgccacaacaacaatgaaacttgaaa--acatgctaagtgaaagaagccactcacaaaaggccatgtatt-ttatgattccatttatatgaaatgtttagaatagacaaatccatcaagacagaaagtgcattagtggttgcca-ggggctggtgagatgtgcggactaggcagtgactgctgatgggtacagagtttatttggggcataacaaacatgttctgaaattagacagaggtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 101143 273 - 106623 ttactcagccataaaaaggaatgaagtacagatgcatgccacaacaacaatgaaacttgaaa--acatgctaagtgaaagaagccactcacaaaaggccatgtattggtatgattccatttatatgaaatgtttagaatagacaaatccatcaagacagaaagtacattagtgtttgcca-ggggctggtgagatgtgcggactaggcagtgactgctgatgggtacagagtttatttggggcataacaaacatgttctgaaattagacagaggtg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2872926 270 - 123690457 ttactcagccataaaaaggaatgaagtacagatgcatgccacaacaacaatgaaacttgaaa--acatgctaagtgaaagaagccactcacaaaaggccgtgtatt-atatgattccatttatatgaaatgtttagaatagacaaatccatcaagacagaaagtacattagcggttgcca-ggggctggtgagatgtggggactaggcagtgactgctgatgggtacagagtttatttggggtgtaacaaacatgttctgaaattagac--agGTg i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 229813 266 + 608964 ttattcacccataaaaaggaacaaaatacagatgcatgctacaacacagatgaagcttatga--acgtggtaagtgaaagaagccagtcacagaaggccacatatt-atatgattcc----atatgaaatgtttagaataggaaaatccatagggatggaaagtagattagc--ccaccagggggctggtg-ggtgtggggaagagggagtgactgctgatgagtacagagtttcctttgggggcaacgaactcattctgcaattagatagtggtg i otoGar3.GL873829 I 668 C 0 s canFam3.chr33 2341953 273 - 31377067 ctattcagccataataagaaatggagtcctgagacacacgacaacgtggatgaacctagaaacgaaatgctaagtgaaagcagtcagtgacaaatgcccacatatt-gtaggattccatttatgcgaaatgtccaccacggggaagcccatagagacgggaagtagattaatgtttgcca-ggggccag-gtggtatggggaacagggagtgactgctaaagggtacagggccacttttggggagtgaagaaatgttctgaaattagacaatggtg i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17309325 8124 - 17725628 I e calJac3.chr17 73873142 9054 + 74750902 I e cebCap1.NW_016107444v1 6402813 7796 + 6778120 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=2345.000000 s hg38.chr3_KI270934v1_alt 86629 2 + 163458 gc s panTro5.chr3 2558913 2 - 202621043 gc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 147566 2 - 190779 gc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 101416 2 - 106623 gc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2873196 2 - 123690457 gc i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 230079 2 + 608964 ac i otoGar3.GL873829 C 0 I 91 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17309325 8124 - 17725628 I e calJac3.chr17 73873142 9054 + 74750902 I e cebCap1.NW_016107444v1 6402813 7796 + 6778120 I e canFam3.chr33 2342226 0 - 31377067 C e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=91301.000000 s hg38.chr3_KI270934v1_alt 86631 107 + 163458 caggcgcagtggctcacacctgtaatcccagcactttgggaggccgaggcgggcagatcatttgaggtcaggagtttgagactagcctggccaacgtggcaaaaccc s panTro5.chr3 2558915 107 - 202621043 caggtgcagtggctcacagctgtaatcccagcactttgggaggccgaggcaggcagatgatttgaggtcaggagtttgagactagcctggccaacgtggcaaaaccc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 147568 107 - 190779 caggtgcagtggctcacacctgtaatcccagcactttgggaggctgaggcgggcagatgatttgaggtcaggagtttgagactagcctggccaacgtggcaaaaccc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 101418 106 - 106623 caggtgcagtgggtcacacctgtaatcccagcactttgaga-gccgaggcggacggatgatttgaggtcaggagtttgagactagcctggccaacgtggcaaaaccc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2873198 107 - 123690457 caggcacagtggctcacacctgtaatctcagcactttgggaggccgaggtgggcagatcatttggggtcaggagtttgagactagcctggccaatgtggcgaaaccc i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17309325 8124 - 17725628 I e calJac3.chr17 73873142 9054 + 74750902 I e cebCap1.NW_016107444v1 6402813 7796 + 6778120 I e canFam3.chr33 2342226 0 - 31377067 C e otoGar3.GL873829 230081 91 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=1365.000000 s hg38.chr3_KI270934v1_alt 86738 1 + 163458 t s panTro5.chr3 2559022 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 147675 1 - 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 101524 1 - 106623 t i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2873305 1 - 123690457 t i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 2342226 1 - 31377067 t i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17309325 8124 - 17725628 I e calJac3.chr17 73873142 9054 + 74750902 I e cebCap1.NW_016107444v1 6402813 7796 + 6778120 I e otoGar3.GL873829 230081 91 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=27023.000000 s hg38.chr3_KI270934v1_alt 86739 26 + 163458 gtctctaccaaaa----aGTGCCAAAAAAA s panTro5.chr3 2559023 26 - 202621043 gtctctaccaaaa----agtaccaaaaAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 147676 26 - 190779 gtctctaccaaaa----agtaccaaaaAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 101525 26 - 106623 gtctctaccaaaa----agtaccaaaaAAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2873306 26 - 123690457 gtctctaccaaaa----agtaccaaaaAAA i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 230172 30 + 608964 gtttttattaaaaaGAGAGAGCCAGAAAGT i otoGar3.GL873829 I 91 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e dasNov3.JH569502 2719477 54 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17309325 8124 - 17725628 I e calJac3.chr17 73873142 9054 + 74750902 I e cebCap1.NW_016107444v1 6402813 7796 + 6778120 I e canFam3.chr33 2342227 0 - 31377067 C e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=49641.000000 s hg38.chr3_KI270934v1_alt 86765 51 + 163458 taaaataagacagcagtgatggttctgcaaccctgtgaatacactgaacaa s panTro5.chr3 2559049 51 - 202621043 taaaataagacagcagtgatggttctgcaaccctgtgaatacactaaacaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 147702 51 - 190779 taaaataagacagcagtgatggttctgcaaccctgtgaatacactaaacaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 101551 49 - 106623 taaagtaagacagcggtgatggttctgcaaccctgtgaatacactaa--aa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2873332 51 - 123690457 taaaagaagacagcagtgatggttttgcaaccctgtgaatacactaaaaaa i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 230202 37 + 608964 CAAGCTAAGAGAAAG-------------AAGCCTGTG-ATTCAGTGAGCAG i otoGar3.GL873829 C 0 I 141 s canFam3.chr33 2342227 33 - 31377067 ------------------ttttttgcacgactctgtgaacacattaaaaac i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2719531 50 - 6579706 taacattagataatggtcatggtagtacaacttt-tgaatttactaaaaag i dasNov3.JH569502 I 54 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17309325 8124 - 17725628 I e calJac3.chr17 73873142 9054 + 74750902 I e cebCap1.NW_016107444v1 6402813 7796 + 6778120 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=95659.000000 s hg38.chr3_KI270934v1_alt 86816 86 + 163458 cactgaaatgtacacatggtgaattgtacaaaagggtaaatctcac-atcctgtaaattatctctcaataaagctgtta-ttAAACag---------- s panTro5.chr3 2559100 86 - 202621043 cactgaaatgtacacacggtgaattgtacaaaagggtaaatctcac-atcctgtaaattatctctcaataaagctgtta-ttaaaaag---------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 147753 86 - 190779 cactgaaatgtacacacggtgaattgtacaaaagggtaaatctcac-atcctgtaaattatctctcaataaagctgtta-ttaaaaag---------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 101600 86 - 106623 cactgaaatgtac-catggtgaattgtacaaagggtaaattttcacaatcatgtaaattatctctcaataaagctgcta-ttaaaaag---------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2873383 86 - 123690457 cactgaaatgtatacatggtgaattgtacaaaagggtaaatttcac-atcatgtaaattatctctcaataaagctgtta-ttaaaaaG---------- i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 2342260 75 - 31377067 cactgaagtgtaccc-----------tttaaaaggatgaatttgat-gttagaggcattatatctcaggaaagctgtta-ttAAAGAG---------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2719581 86 - 6579706 cattgaattatacac-----------tttaaaagggtggatttgat-ggtgggtggattatttctcaataaagctgttatttaaagagggagagacag i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17309325 8124 - 17725628 I e calJac3.chr17 73873142 9054 + 74750902 I e cebCap1.NW_016107444v1 6402813 7796 + 6778120 I e otoGar3.GL873829 230239 141 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=154338.000000 s hg38.chr3_KI270934v1_alt 86902 137 + 163458 a------------------------gagagagagaagga--gagaaaag-ggggagataagatgaggacggtaatggg------agtgacagc---gaagagaga-----aatagagaaaac-a----gc-----agag-aagagagtgcc--taagaggg--agagaAACCCCTCCCCCACTCCCCACAG-TT s panTro5.chr3 2559186 137 - 202621043 a------------------------gagagagagaagga--gagaaaag-ggggagataagatgaggacggtaatggg------agtgacagt---gaagagaga-----aatagagaaaac-a----gc-----agag-aagagagtgcc--taagaggg--agagaAACCCCTCCCCCACTCCCCACAG-TC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 147839 137 - 190779 a------------------------gagagagagaagga--gagaaaag-ggggagataagatgaggacagtaatggg------agtgacagt---gaagagaga-----aatagagaaaac-a----gc-----agag-aagagagtgcc--taagaggg--agagaAACCCCTCCCCCACTCCCCACAG-TC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 101686 141 - 106623 a------------------------gagagagagaagga--gagaaaagcagggagataagatgaggacggtaatggg------agtgacagc---aaagagaga-----aatagagaaaacaa----gc-----agagaaagagagtgcc--taagaggg--agagaAACCCCTCCCCACATCCCCACAGTTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2873469 149 - 123690457 ACAGG--------------------GAGAGAGAGGAGGA--GAGAAAAG-GGGGAGATAAGATGAGGAGGGTAACGGG------AGTGACAGCAAAGAAGAGAGAAAGACAATCGAGAAAAC-A----GC-----AGAG-AAGAGAGTGCC--TAAGAGGG--AGAGAAACCCCTCCCCCACTCCCCACAG-TT i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 230380 144 + 608964 a------------------------aaaaaaaaaaagaa--aaGAAAAG-AGAGTGACAAGAAGAGGAGGGCAATAGGAAAATAAATAACAGCAAAGAAGAGAGAGAGGCACCAGGGACAAC-ATGGGAC-----AGAG-AAGAGAGTGTG--GTA-AGGG--AGAGAAAACC----------CCAGAAAG-TT i otoGar3.GL873829 I 141 C 0 s canFam3.chr33 2342335 160 - 31377067 --AGGCACAAGAGTGAGACGGAGCTGAGAGAAAGAAGGAAGGAGAGAGA-AGAGAGACAAGAGGAGGCTGGCAG-GGA------TGTGGCGGGAAGGAAGAAAGAGAAGCAATAAAGTAAAC-A----AC-----AGAC-AGAAGTGTGAC---AAGAGGGACAGAGAAAAACC---------CCACAGAG-TT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2719667 155 - 6579706 -------------agagacagagatggaagagagacaga--cagaaaag-ggagaccaaaaaggagggagtccg-agg------agtgactgtaaggaagggagggaggtaagagagaaacc-a----gcactcaagag-aagagagtgtgataaaaagggacagagaaaACCC---------CCAGAAAG-TT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17309325 8124 - 17725628 I e calJac3.chr17 73873142 9054 + 74750902 I e cebCap1.NW_016107444v1 6402813 7796 + 6778120 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=111436.000000 s hg38.chr3_KI270934v1_alt 87039 34 + 163458 AGAGGAAGGTCTTCCAGAGCCCTGTTTACAAACC s panTro5.chr3 2559323 34 - 202621043 AGAGGAAGGTCTTCCGGAGCCCTATTTACAAACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 147976 34 - 190779 AGAGGAAGGTCTTCCGGAGCCCTATTTACAAACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 101827 34 - 106623 AGAGGAAGGTCTTCCGGAGCCCTATTTACAAACC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2873618 34 - 123690457 AGAGGAAGGTCTTCCGGAGCCCTATTTACAAACC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73882196 34 + 74750902 AGAGGAAGGTCTCCAGGAGCCCAGCTTACAAAAT i calJac3.chr17 I 9054 C 0 s saiBol1.JH378146 17317449 34 - 17725628 AGAGGAAAGTCTCCAGGAGCCCAATTTACACACC i saiBol1.JH378146 I 8124 C 0 s cebCap1.NW_016107444v1 6410609 34 + 6778120 AGAGGAAGGTCTCCAGGAGCCCAATTTACAAACC i cebCap1.NW_016107444v1 I 7796 C 0 s otoGar3.GL873829 230524 34 + 608964 AGAGGAAGCTCTCCATGATCCCCAGTCACACAAC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2342495 34 - 31377067 GGAGGAAGGTCGCCATGGTCCCTAATCACAAAGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2719822 33 - 6579706 AGAGAGAGGTCTCCATGGTCTCC-TTCACAAAAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32806886 716 + 98207768 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=345292.000000 s hg38.chr3_KI270934v1_alt 87073 108 + 163458 AGTTCTGCCAACTCTAC--CCCCTGCCCAAATTTCCCCAAA-TTGCTCAGCTCAGTTGTGATCTGGTCATTGTCATTCC-CTCCA-AGAGAAGGGGATGCATCTTC-------------TTTAAGA- s panTro5.chr3 2559357 108 - 202621043 AGTTCTGCCAACTCTAC--CCCCTGCCCAAATTTCCCCAAA-TTGCTCAGCTCAGTTGTGATCTGGTCATTGTCATTCC-CTCCA-AGATAAGGGGATGCATCTTC-------------TTTAAGA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148010 108 - 190779 AGTTCTGCCAACTCTAC--CCCCTGCCCAAATTTCCCCAAA-TTGCTCAGCTCAGTTGTGATCTGGTCATTGTCATTCC-CTCCA-AGATAAGGGGATGCATCTTC-------------TTTAAGA- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 101861 109 - 106623 AGTTCTGCCAACTCTAC--CCCCTGCCCAAATTTCCCCCAATTTGCTCAGCTCAGTTGTGATCTGGTCATTGTCATTCC-CTCCA-ATATAAGGGGATGCATCTTC-------------CTTAAGA- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2873652 108 - 123690457 AGTTCTGCCGACTCTAC--CCCCTGCCCAAATTTCCCCAGA-TTGCTCAGCTCAGTTGTGATCTGGTCATTGTCATTCC-CTCCA-AGATAAGGGGATGCATCTTC-------------TTTAAGA- i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73882230 105 + 74750902 GGTTCTGCCAGCTCCAC--CCCCGGCC---ATTTCCCCAAA-GTGCTTAGCTCAGCTGTGATCTGGTCTTGGTCATTCC-CTCCA-AGGTAAGGGGGTGCATCTTC-------------GTTAAGA- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17317483 105 - 17725628 AGTTCTGCCGGCTCTAC--CCTCGGCC---ATTTCCCCAAA-TCACTTAGCTTAGTGGTGATCTGGTCTTGTTCATTCC-CACCA-AGATAAGGGGGTGCATCTTT-------------TTTAAGA- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6410643 105 + 6778120 AGTTCTGCCAGCTCTAC--CCCCAGCC---ATTTCCCCAAA-TCACTTAGCTCAGTTGTGATCTGGTCTTGGTCATTCC-CACCA-AGATAAGGGGGTGCATCTTC-------------TTTAAGA- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 230558 118 + 608964 AGAT-TACCAACCCCAC--CCTCTACC---ATTTCCCCAAG-TTGCTCAACTCAGTTGTAATCTGTACATTGCCTGTCCACTACA-AGATGAGGGGATATATCttcttttttttttttttttaaga- i otoGar3.GL873829 C 0 I 165 s mm10.chr16 32807602 101 + 98207768 AGTTTCGTCAGCTCTGCTTCCCTAACC---ATTTCCCTAAG-TTGCTCAACTCAGTGGTTATCTGTTTATTA--------AACCACAAATAAGCAGGTGCACCTCT-------------TTTAAGA- i mm10.chr16 I 716 C 0 s canFam3.chr33 2342529 106 - 31377067 GGTTTCATCAACCCTAA--TTCTAACC---ATTTTCCCAAG-TTGCTCACTTCGATCATATCTGGGCTATTGCCTACCCACTACA-GAGTGAGGGGGGTTATcttc-------------tttaagg- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2719855 105 - 6579706 AGCCTCACCAGCCCCAA--CTGCCCCC---A-TTCCCCAAG-TTACTCAACTGAACTATTATATGATCATTGCCTGTCC-ACTCG-GGATCAGGGGACTCATCTTC-------------CTTTACAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=6600.000000 s hg38.chr3_KI270934v1_alt 87181 1 + 163458 G s panTro5.chr3 2559465 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148118 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 101970 1 - 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2873760 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73882335 1 + 74750902 G i calJac3.chr17 C 0 I 308 s saiBol1.JH378146 17317588 1 - 17725628 G i saiBol1.JH378146 C 0 I 302 s cebCap1.NW_016107444v1 6410748 1 + 6778120 G i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 230841 1 + 608964 g i otoGar3.GL873829 I 165 C 0 s mm10.chr16 32807703 1 + 98207768 G i mm10.chr16 C 0 I 2 s canFam3.chr33 2342635 1 - 31377067 g i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 2719960 1 - 6579706 G i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=4095.000000 s hg38.chr3_KI270934v1_alt 87182 1 + 163458 T s panTro5.chr3 2559466 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148119 1 - 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 101971 1 - 106623 T i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2873761 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73882644 1 + 74750902 T i calJac3.chr17 I 308 C 0 s saiBol1.JH378146 17317891 1 - 17725628 T i saiBol1.JH378146 I 302 C 0 s cebCap1.NW_016107444v1 6410749 1 + 6778120 T i cebCap1.NW_016107444v1 C 0 I 307 s otoGar3.GL873829 230842 1 + 608964 t i otoGar3.GL873829 C 0 I 110 s dasNov3.JH569502 2719961 1 - 6579706 T i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e mm10.chr16 32807704 2 + 98207768 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e canFam3.chr33 2342636 2 - 31377067 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=1251.000000 s hg38.chr3_KI270934v1_alt 87183 2 + 163458 GC s panTro5.chr3 2559467 2 - 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148120 2 - 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 101972 2 - 106623 GG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2873762 2 - 123690457 GG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73882645 2 + 74750902 GG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17317892 2 - 17725628 GG i saiBol1.JH378146 C 0 C 0 s mm10.chr16 32807706 1 + 98207768 A- i mm10.chr16 I 2 C 0 s canFam3.chr33 2342638 2 - 31377067 gg i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 2719962 2 - 6579706 GG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e aotNan1.NW_018503669v1 38387 7711 + 69927 I e micMur3.chr1 88406753 2151 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e cebCap1.NW_016107444v1 6410750 307 + 6778120 I e otoGar3.GL873829 230843 110 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=119413.000000 s hg38.chr3_KI270934v1_alt 87185 36 + 163458 GGCAAGCAAGGCG-TGGGCAGG-AGGGACGCTGGCCCA s panTro5.chr3 2559469 36 - 202621043 AGCAAGCAAGGCG-TGGGCAGG-AGGGACGCTGGCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148122 36 - 190779 AGCAAGCAAGGCG-TGGGCAGG-AGGGACGCTGGCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 101974 36 - 106623 GGCAAGCAAGGCA-TGGGCAGG-AGGGACGCTGGCCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2873764 36 - 123690457 GGCAAGCAAGGCG-TGGGCAGG-AGGGATGTTGGCCCA i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73882647 35 + 74750902 GGCAAAGAAGGTA-TTGGCAGG-AGGGACTACGG-CCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17317894 36 - 17725628 GGCAAACAAGGTT-TTGGCAGG-AGGGACTATGGCCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6411057 36 + 6778120 GGCAAGCAAGGTG-TTGGCAGG-AGGGACTATGGCCCC i cebCap1.NW_016107444v1 I 307 C 0 s aotNan1.NW_018503669v1 46098 36 + 69927 GGCAAACAGGGTG-TTGGCAGG-AGGGACTGTGGCCCA i aotNan1.NW_018503669v1 I 7711 C 0 s otoGar3.GL873829 230953 36 + 608964 GGAAAGCAAGGCA-GTGGCAGATAGCGACTACCACCT- i otoGar3.GL873829 I 110 C 0 s mm10.chr16 32807707 35 + 98207768 GGAAAAAATGAAACTGGGCAGG-CGGGGGTGAGGTA-- i mm10.chr16 C 0 I 1 s canFam3.chr33 2342640 36 - 31377067 ggaaagcaaggca-ttggcagg-tagggatgtggccca i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2719964 38 - 6579706 GGACAGCAAGGCGTTGGGCAGGTAGGGACCATGGCTCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14810763 2330 - 22200726 I e micMur3.chr1 88406753 2151 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=558848.000000 s hg38.chr3_KI270934v1_alt 87221 140 + 163458 -GTTACCTGGCGAGTCTGTGGCTCAGGTGAGCA-GGGGACCCAGGTGTTGTCA-C-CCCAGGACTCTCAACACTCTTCTCCGTCTACTTGACTTTGACCTTCCAAATTGCTTCCTGTTAGGTTAACACCTGGCTCTTT----AGGGCT s panTro5.chr3 2559505 140 - 202621043 -GCTACCTGGCGAGTCGGTGGCTCAGATGAGAA-GGGGACCCAGGTGTTGTCA-C-CCCAGGACTCTCAACACTCTTCTCCGTCTACTTGACTTTGACCTTCCAAATTGCTTCCTGTTAGGTTAACACCTGGCTCTTT----AGGGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148158 140 - 190779 -GCTACCTGGCGAGTCGGTGGCTCAGGTGAGAA-GGGGACCCAGGTGTTGTCA-C-CCCAGGACTCTCAACACTCTTCTCCGTCTACTTGACTTTGACCTTCCAAATTGCTTCCTGTTAGGTTAACACCTGGCTCTTT----AGGGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 102010 141 - 106623 -GTTACCTGGCGAGTCTGTGGCTCAGGTGAGAAGGGGGACCCAGGTGTTGTCA-C-CCCAGGACTCTCAACACTGTTCTCCGTCTACTTGACTTTGACCTTCCAAATTGCTTCCTGTTAGGTTAACACCTGGCTCTTT----AGGGCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2873800 140 - 123690457 -GTTACCTGGCGAGTCTGTGGCTCAGATGATAA-GAGGACCCAGGTGTTGTCA-C-CCCAGGACTCTCAACACTGTTCTCTGTCTACTTGACTTTGACCTTCCAAATTGCTTCCTGTTAGGTTAACACCTGGCTCTTT----AGGGCT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73882682 131 + 74750902 -ATTACTTGGCAAGTCTATGGCTTCGGTGAGAA-GCGGACCCAGGTGTTCTCA-C-CGCAGGACTCTCAATGCTGTT---CAACTGCTTTACCTTGACCTTCCACATTGCTTCCTATTAGGTTAACACCTGACTGTTT---------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17317930 137 - 17725628 -GTTACCTGGCAGGTCTATGGCTCTGGTGAGAA-GAGGACCCAGCGGTTCTAA-C-CCCAGGACTCTAAATGCTGTT---CAACTACTTTACCTTGACCTTCCAAATTGCTTCCTATTAGGTTAACACCTGACTGTTT----AGGGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6411093 140 + 6778120 -GTTACCTGGCAGGTCTATGCCTCCGGTGAGAA-GAGGTCCCAGCGGTTCTCA-C-CCCAGTACCCTCAATGCTGTTCTCCAATTACTTTACCTTGACCTTCCAAATTGCTTCCTATTAGGTTAACACCTGACTGTTT----AGGGCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 46134 140 + 69927 -GTTACCCGGCAAGTCTGTGGCTCCGGTGAGAA-GAGGACCCGGCTGTTCTCA-C-CCTGGGACTCTCCATGCTGTTCTCCGACCTCTTTATCTTGACCTTCCAAATTGCTTCCTATTAGGTTAACACCTGACTGCTC----AGGGCT i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14813093 144 - 22200726 -GTTACCTGGTGAGTCTGTGGCTCAGGTAAGAA-TGGGCTCCATGTGTTCTCACC-CCCAGGATTCTCAGCGCTGATCTCCCTCTACTCTACCTTGACCTTCC-AATTGCCCCTGGTTAGGTTAGCACCTGCCTATTTGTTTAGGGGT i proCoq1.NW_012133858v1 I 2330 C 0 s otoGar3.GL873829 230989 130 + 608964 -GTTACTCAGTGAGTCTGCGGCTCAGGTAACAG-TAGGACTCA---GTTCTCA-C-CCCAGGA--CTCAGCACTGGTCTCC-----CTCTACCTTGACCT----AATTGCAACTGGTTAGGTTAGCACCTGCCTGTTTGTTTAAGGGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32807743 105 + 98207768 -GTT-CCTGGAGAGTC--TGGTTCATG---GGA-CTGGGCCCAGATAGCTTAA-T-TTTAA---TTTTAATGCTGCT-------TGCTTT--------CTTTTCAATTGATTCCTGTTAGCTTAGCACCTGCC--------------- i mm10.chr16 I 1 C 0 s canFam3.chr33 2342676 125 - 31377067 -----ggtggtgagtcagtggctcaggggggaa-tgagccccaggggatctca-cacccaggactctcagtgctgttctttctctgctTTACCTTGACCTACCCAGTCACCTCCTGTCAGCTTAGCACCTGC---------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2720002 128 - 6579706 GGGTAGCTGGTGAGTCTGTAGCTCAG-TGGGAA-TGAGTCCCCG-TGTTCTCA-C-CCCTGGA-ACTCAATGCTGTTCGCCCTCTATGTTACCTTGACCTTCCCAGTTGCCTCCCTTTAAGTTAGCACCTGCCT-------------- i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88406753 2151 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=536045.000000 s hg38.chr3_KI270934v1_alt 87361 78 + 163458 AAACTGGAGGGCTTTGTTTAGGGATAAACTTGAAGGCCTTTCAAAGTTGACACGATCAACAGGGAGCAGGCCTCTGAG s panTro5.chr3 2559645 78 - 202621043 AAACTGGAGGGCTTTGTTTAGGGATAAACTTGAAGGCCTTTCAAAGTTGACACGATCAACAGGGAGCAGGCCTCTGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148298 78 - 190779 AAACTGGAGGGCTTTGTTTAGGGATAAACTTGAAGGCCTTTCAAAGTTGACACAATCAACAGGGAGCAGGCCTCTGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 102151 78 - 106623 AAACTAGAGGGCTTTGTTTAGGGATAAACTTGAAGGCCTTTCAAAGTTGACAAGATCTACAGGGAGCAGGCCTCTGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2873940 78 - 123690457 AAACTGGAGGGCTTTGTTTAGGGATAAACTTGAAGGCCTTTCAAAGTTGCCAAGATCAACAGGGAGCAGGCCTCTGAG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73882813 71 + 74750902 -------AGGGCTTTGTTTAGAGATAAACTCGAAGGCCTTTCAAAGTTGACAAGATCAACAGGGAGCAGGCCTCTAAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17318067 78 - 17725628 ACACTGGAGGGCTTTGTTTAGAGATAAACTCGAAGGCCTTTCAAAGTTGACAAGATCAACAGGGAACAGGCCTCTAAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6411233 78 + 6778120 ACACTGGAGGGCTTTGTTTAGAGATAAACTCGAAGGCCTTTCAAAGTTGACAAGATCAACAGGGAACAGGCCTCTAAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 46274 63 + 69927 ACGCTGGGGGGCTTTGTTTAGAGATAAACTCGAAGGCCTT---------------TCGACAGGCAGCAGGCCTCTAAT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88408904 78 + 114275543 AAACTTGAGAGCTTTGTTTAGGGATAAACTTGAGGGCCTTCCCAAGTTGACAAGATCAACAAGGAACAGGCCTTTGAG i micMur3.chr1 I 2151 I 86 s proCoq1.NW_012133858v1 14813237 77 - 22200726 AAATTTGAGGGC-TTGTTTAGGGATAAACTTGAAGGCCTTCCCAAGTTGATAAGATCAACAGGGAGCAGACCTTTGAT i proCoq1.NW_012133858v1 C 0 I 1 s otoGar3.GL873829 231119 78 + 608964 AAACGTGAGGTCTTTGTTTAGGGATAAACTTGAGGGCCTTCCAAAGTTGACACGATCAACAGGGAGCAGGCCTCTGAG i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32807848 70 + 98207768 ------AGGGGCCTTGTTTAAGGATAAACTTGA-GGACTTTCAGAGTTGACAGGGTCAACA-GAAGCTGGCCTTTGAA i mm10.chr16 C 0 I 1 s canFam3.chr33 2342801 71 - 31377067 -------GGGGCTTTGTTTATGGATAAACTTGAGGGCCTTCCAAAGTTGACAAGATCAACAAGGAGCAGGCTCCTGAG i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2720130 68 - 6579706 -------GGGGCTTTGTTTAGAG---GACTTGAAGGCCCTCCAAAGTTGACAAGATCAACAAGAAGCAGGCCTTTGAG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=262239.000000 s hg38.chr3_KI270934v1_alt 87439 47 + 163458 -CCCTGTGGGCCTGGGTGTGGCTGAGCCAGTCTGTTGTGGAAACAGGG- s panTro5.chr3 2559723 47 - 202621043 -CCCTGTGGGCCTGGGTGTGGCTGAGCCAGTCTGTTGTGGAAACAGGG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148376 47 - 190779 -CCCTCTGGGCCTGGGTGTGGCTGAGCCAGTCTGTTGTGGAAACAGGG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 102229 47 - 106623 -CCCTGTGGGCCTGGGTGTGGCTGAGCCAGTCTGTTGTGGAAACAGGG- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2874018 47 - 123690457 -CCCTGTGGGCCTGGGTGTGGCTGAGCCAGTCTGTTGTGCAAACAGGG- i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73882884 46 + 74750902 -CCCCATGGGCCTGGGTGTGG-TGAGCCAGTCTGTTGTGGAAACAGGG- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17318145 47 - 17725628 -CCCTGTGGGCCTGGGTGTGGCTGAGCCAGTCTGTTGTGGAAACAGGG- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6411311 47 + 6778120 -CCCTGTGGGCCTGGGTGTGGCTGAGCCAGTCTGTTGTGGAAACAGGG- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 46337 47 + 69927 -CCCTGTGGGCCTGGGTGGGGCTGAGCCAGTCTGTTGTGGAAACGCGG- i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14813315 47 - 22200726 -GGATGTGGGGCTGGGTGTGGCTGACCCAATCTGTAGTGGAAACAGGG- i proCoq1.NW_012133858v1 I 1 I 29 s otoGar3.GL873829 231198 47 + 608964 -GGATATGGGGCTAGGTAGAGCTGGCCCAGTCTGTGGTGGAAACAGAG- i otoGar3.GL873829 I 1 I 1 s mm10.chr16 32807919 47 + 98207768 -GGAAGCAAGGCTGGGTGTGGCCAAGCCAAAGTGTTGTGAAAACAGGA- i mm10.chr16 I 1 C 0 s canFam3.chr33 2342873 47 - 31377067 -GGATGTGGGGCTAGGTGTGGTCAGCCTGGCCTGTTATGGAAACAGGC- i canFam3.chr33 I 1 I 1 s dasNov3.JH569502 2720198 49 - 6579706 AGGCTGTGGAATCAGGTGTAGCCCGCCCAGCCTGTTGTGTAAACAAGGG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88408982 86 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=64322.000000 s hg38.chr3_KI270934v1_alt 87486 19 + 163458 CCAGCAGGTGTCCG----GT---AGT s panTro5.chr3 2559770 19 - 202621043 CCAGCAGGTGTCTG----GT---AGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148423 19 - 190779 CCAGCAGGTGTCTG----GT---AGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 102276 19 - 106623 CCAGCAGGTGTCTG----GT---AGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2874065 22 - 123690457 CCAGCAGGTGTCTG----GTAGAAGT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73882930 19 + 74750902 CCAGCAGGTGTCTG----GT---GGA i calJac3.chr17 C 0 I 9 s saiBol1.JH378146 17318192 19 - 17725628 CCAGCAGGTGTCTG----GT---GGA i saiBol1.JH378146 C 0 I 9 s cebCap1.NW_016107444v1 6411358 19 + 6778120 CCAGCAGGTGTCTG----GT---GGA i cebCap1.NW_016107444v1 C 0 I 9 s aotNan1.NW_018503669v1 46384 19 + 69927 CCAGCAGGTGTCTG----GT---GGA i aotNan1.NW_018503669v1 C 0 I 8 s otoGar3.GL873829 231246 19 + 608964 CCAGCAGGTGTCTG----GT---GAA i otoGar3.GL873829 I 1 I 9 s mm10.chr16 32807966 14 + 98207768 ---------GTCTGAAGTGC---AGA i mm10.chr16 C 0 I 5 s canFam3.chr33 2342921 19 - 31377067 CCAGTAGGTGTCCG----GT---GAG i canFam3.chr33 I 1 I 9 s dasNov3.JH569502 2720247 11 - 6579706 CC--CAGGTGACT------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14813362 29 - 22200726 I e micMur3.chr1 88408982 86 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=78776.000000 s hg38.chr3_KI270934v1_alt 87505 19 + 163458 GTGGTCTGGGGGGTCAAGA s panTro5.chr3 2559789 19 - 202621043 GTGGTCTAGGGGGTCAAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148442 19 - 190779 GTGGTCTGGGGGGTCAAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 102295 19 - 106623 GTGGTCTGGGGGGTCAAGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2874087 19 - 123690457 GTGGTCTGGGGGGTCAAGA i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73882958 19 + 74750902 GTGGTCTGGGAGGTCAAGA i calJac3.chr17 I 9 C 0 s saiBol1.JH378146 17318220 19 - 17725628 GTGGTCTGGGAGGTCAGGA i saiBol1.JH378146 I 9 C 0 s cebCap1.NW_016107444v1 6411386 19 + 6778120 GTGGTCTGGGAGGTCAAGG i cebCap1.NW_016107444v1 I 9 C 0 s aotNan1.NW_018503669v1 46411 19 + 69927 GTGGTCTGGCAGGTCACGA i aotNan1.NW_018503669v1 I 8 C 0 s proCoq1.NW_012133858v1 14813391 19 - 22200726 GTGGCCTGGGAGGTCAGAT i proCoq1.NW_012133858v1 I 29 C 0 s otoGar3.GL873829 231274 19 + 608964 GTGGCCTGGGAGGTCAGAT i otoGar3.GL873829 I 9 C 0 s mm10.chr16 32807985 12 + 98207768 GAGGTCCGGGAC------- i mm10.chr16 I 5 C 0 s canFam3.chr33 2342949 19 - 31377067 GTAGCCTGGGAGGTCAGAC i canFam3.chr33 I 9 C 0 s dasNov3.JH569502 2720258 3 - 6579706 ---------------AAC- i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88408982 86 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=758291.000000 s hg38.chr3_KI270934v1_alt 87524 123 + 163458 CTCTGAAGGTGAGG---GTG-GCCTGG-CT-----------GGGGCCACAGCCTCTGAGTTTGGCCTGGCTTTTGCCTCATGTTCAGCTCAGGAGCCTCCTGCAAGTGATCAGCTTCTCTTCTCATGTTGTCCCTCTTC s panTro5.chr3 2559808 123 - 202621043 CTCTGAAGGTGAGG---GTG-GCCTGG-CT-----------GGGGCCACAGCCTCTGAGTTTGGCCTGGCTTTTGCCTCATGTTCAGCTCAGGAGCCTCCTGCAAGTGATCAGCTTCTCTTCTCATGTTGTCCCTCTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148461 123 - 190779 CTCTGAAGGTGAGG---GTG-GCCTGG-CT-----------GGGGCCACAGCCTCTGAGTTTGGCCTGGCTTTTGCCTCATGTTCAGCTCAGGAGCCTCCTGCAAGTGATCAGCTTCTCTTCTCATGTTGTCCCTCTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 102314 121 - 106623 CTCTGAAGGTGAGG---GTG-GCCTGG-CT-----------GGGG-CACAGCCTCTGAGTTTGGCCTGGCTTTTGCCTCATGTTCAGCTCAGGAGCCTCCTGCAAGTGATCAGCTTCTCTTCTCATGTTGT-CCTCTTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2874106 123 - 123690457 CTCTGAAGGTGAGG---GTG-GCCTGG-CT-----------GGGGCCACAGCCTCTGAGTTTGGCCTGGCTTTTGCCTCATATTGAGCTCAGGAGCCTCCTGCAAGTGATCAGCTTCCCTTCTCATATTGTCCCTCTTC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73882977 121 + 74750902 --CTGACGGTGAGG---ATG-GGCGGG-CT-----------GGGACCACAGCCTCTGAGTCTAGCCTGGCTCCTGCCTCCTGTTGGGCTCCGGAGCGTCCTGCAAGTGATCAGCTTCCCTTCTCATGTTGTCCCTCTTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17318239 121 - 17725628 --CTGACGGTGAGT---CTG-GGCTGG-CT-----------GGGACCACAGCCTCTGAGTCTGGCCTGGCTCCTGCCTCCTGTTGGGCTCAGGAGCCTTCTGCAAGTGACCACCTTCCCTTCTCATGCTGTCCCTCTTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6411405 121 + 6778120 --CTGACAGTGAGG---ATG-GGCTGG-CG-----------GGGACCACAGCCTCTGAGTCTGGCCTGGCTCCTGCCTCCTGTTGGGCTCGGGAGCCTCCTGCAAGTGACCACCTTCCCTTCTCATGCTGTCCCTCTTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 46430 121 + 69927 --CTGACGGTGAGG---ACG-GGCTGG-CT-----------GGGACCACAGCGTCGGAGTCTGGCCTGGCTCCCGCCTCCTGTTGGGCTCGGGAGCCTCCTGCAAGCGATCAGCTTCCCTTCTCATGCTGTCCCTCTTC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88409068 124 + 114275543 CTCTCAAGGTCAGG---GTG-GGCTGGGCT-----------GGGGTGGCAGCCCCTGAGTTTGGCCTGGCTTCTGCCTCATGTTCAGCTCAGGAGCTTCCTGCAAGTGATCAGCTTCCCTTCTCCTGTTGTCTCTCTTC i micMur3.chr1 I 86 C 0 s proCoq1.NW_012133858v1 14813410 124 - 22200726 CTCTCAAGGTCAGG---GTG-GGCTGGGCT-----------GGGGTGGCAGCCCCTGAGTTTGGCCTGGCTTCTGCCTCATGTTCAGATCAGGGGCTTCCTGCAATTGATCAGTTTCCCTTCTCCTGTTGTCCCTCTTC i proCoq1.NW_012133858v1 C 0 I 9 s otoGar3.GL873829 231293 128 + 608964 ATCCCAAGGTGGGGGGTGTGTGGCTGGACT-----------GGGATGGTAACCTCTGAGTTTGACCTGGCTTTTGCCTCATGTTCAGCTCAGGAGCTTCCTGTAAATGATTAGCTTCCCTTTTCCTGTTGTCCTTCTTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32807997 116 + 98207768 CTCTCAAAGTAAGA---GTG-GGCAGGGCT-----------GGGGCTCTGG---CTGAGCCT---CAGGCTCCAG-TTCACACTCAGTTCAGGGGCCTCCTACTGGTGGCTTAC-TCCATCCCTAAGCCATCCCTCTTC i mm10.chr16 C 0 C 0 s canFam3.chr33 2342968 134 - 31377067 CTCTCAAGGTGACG---GCA-GGCCAGGCTCGGGGGGGTTGGGGGGGATGGCCTCTGAGTTTGGCCTGGCTTCTGCTTCTTGTTGGGC-AAGGAGCCTCCTGCAAATGATTAGTTCCCCTTCTCACATCATCCCTCTTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2720261 124 - 6579706 CTCTCCAGGTGAGG---ATGGGGCTGG-CT-----------GTGGCCGTGGCCTCTGAATTTGGCCTGGCACCTGTCTCACAGTCACCTCCAGAGCCTCCTGCAAATGGCTAATTTCCCTTTTCACTTTGTTGCTCTTC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=34300.000000 s hg38.chr3_KI270934v1_alt 87647 11 + 163458 TCCAGAGCCTG s panTro5.chr3 2559931 11 - 202621043 TCCAGAGCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148584 11 - 190779 TCCAGAGCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 102435 11 - 106623 TCCAGAGCCTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2874229 11 - 123690457 CCCAGAGCCTC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73883098 11 + 74750902 CCCAGATCCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17318360 11 - 17725628 CCCAGATCCCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6411526 11 + 6778120 CCCAGATCCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 46551 11 + 69927 CCCAGATCCTG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88409192 9 + 114275543 -CGAGTGCTG- i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 231421 10 + 608964 -CAAGTGCCTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32808113 10 + 98207768 TCAAGCATCT- i mm10.chr16 C 0 C 0 s canFam3.chr33 2343102 11 - 31377067 CCAAGTTCCTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2720385 11 - 6579706 CCAAGTGCTTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14813534 9 - 22200726 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=464693.000000 s hg38.chr3_KI270934v1_alt 87658 90 + 163458 GTGCTGCGTCAGGTTGTCACCAAGACCAGGGATCAACCAGAAAGGGCTGGAGTGGAAATAGAGCCCCAGGAGCCACCcagactaag-gttg s panTro5.chr3 2559942 90 - 202621043 GTCCTGCGTCAGGTTGTCACCAAGACCAGGGATCAACCAGAAAGGGCTGGAGTGGAAATAGAGCCCCAGGAGCCACCcagactaag-gttg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148595 90 - 190779 GTCCTGCGTCAGGTTGTCACCAAGACCAGGGATCAACCAGAAAGGGCTGGAGTGGAAATAGAGCCCCAGGAGCCACCcagactaag-gttg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 102446 89 - 106623 GTCCTGCGTCAGGTTGTCACCAAGACCAGGGATCAACCAGAAAGGGCTGCAGTGGAAATAGAG-CCCAGGAGCCACCcagactaag-gttg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2874240 90 - 123690457 GTCCTGCGTCAGGTTGTCACCAAGACCAGGGATCAACCAGAAATGGCTGGAGTGGAAATAGAGCCCCAGGAGCCTCCcagactaag-gttg i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73883109 89 + 74750902 GTCCTGTATCAGGTTGTCACTGAGACCGGGGATCAACCAGAAAGGGCTGAAGCAGAAACAGAGCCCCAGGAACCA-TCAGACTAAG-CTTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17318371 89 - 17725628 GTCCTGTATCAGGTTGTCACTGAGACCGGGGATCAACCAGAAAGGGCTGAAGCAGAAATGGAGCTGCAGGAACCA-tcagactaag-cttg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6411537 89 + 6778120 GTCCTGTATCAGGTTGTCACCGAGACCAGGGACCGACCAGAAAGGGCTGAAGCAGAAACAGAGCCCCAGGAACCA-tcagactaag-cttg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 46562 82 + 69927 GTCCTGTATCCGGTTGTCACC-------AGGATCAACCAGAAAGCGCTGAAGCAGAAATAGAGCCCCAGGAACCG-tcagactaag-cttg i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 88409201 90 + 114275543 GTCCAGCATCAGGTTGTCACCAAGAGTAGGGACCAGTCATAGAGGGTTGGGGCTGAAATACAGCCCCAGGAACCATCCAAACTAGG-GTTG i micMur3.chr1 C 0 I 275 s proCoq1.NW_012133858v1 14813543 90 - 22200726 GTCCAGCATCAGGTTGTCACCAAGACTAGGGACCAGTCAGAGAGGGTTGGGGCTGAAATAGAGCCCCAGGAACTAtccaaactagg-gttg i proCoq1.NW_012133858v1 I 9 C 0 s otoGar3.GL873829 231431 90 + 608964 GTTCAGCATCAGGTTGTCACCAAGACCAGGGACCAGTCAGAGAGGGTTAGGCCTGAAATAGAGCCCCAGGAACCATCCAAACTAGG-GTTA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32808123 55 + 98207768 ---------------------AAGACCAAGAATCAACT--AAAGAGCAAGGGTGGGA------------GAAGCGTCCAAATGAAG-GGTG i mm10.chr16 C 0 C 0 s canFam3.chr33 2343113 90 - 31377067 GTTCAGTGCCAGGTTGTCACCAATACCA-GGATGGATCAAAGAGGGCTGGATATGGAAAAAAGCCCTAGAGAttatccaaacaaagagttg i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2720396 80 - 6579706 GTCCAGCATCA----GTCATC---ACCAGGTACCAATCAGAG-GGTCTGCAGAGGAATT--AACCCCAAGGACCATCTGAACTAGT-GTTC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=313728.000000 s hg38.chr3_KI270934v1_alt 87748 92 + 163458 ccgacaatctgtgagactgagttcaattcagtggtcataaccaacatttatttca--------------------------------------------acaggatgaca----------ctgaatgaaatagaatagaatagacc s panTro5.chr3 2560032 92 - 202621043 ccgacaatttgtgagactgagttcaattcagtggtcataaccaacatttatttca--------------------------------------------acaggatgaca----------ctgaatgaaatagaatagaatagacc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148685 92 - 190779 ctgacaatttgtgagactgagttcaattcagtggtcataaccaacatttatttca--------------------------------------------acaggatgaca----------ctgaatgaaatagaatagaatagacc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 102535 92 - 106623 ccgacaatttgtgagactgagttcaattcagtggtcataaccaacatttatttca--------------------------------------------acaggatgaca----------ctgcatgaaatagaatagaatagacc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2874330 86 - 123690457 ccgacagtttgtgagactgaggtcaattcggtgg-cataaccaacattcacttca--------------------------------------------acaggatgaca----------ctgaatga-----aatagaatagacc i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73883198 76 + 74750902 CAAACCATCTGTGAGTCTGAGAGC--CTCAG--------------ACATATTTTA--------------------------------------------ACGGGATGACG----------CTGaatgaaacagaataggataggcc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17318460 92 - 17725628 caaaccatttgtgagtctgagagcaattcagtggtcataaccaacatttatttta--------------------------------------------acaggatgacg----------ttgaatgaaatagaataggatagacc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6411626 91 + 6778120 caaaccatttgtgagtctgagagcaattcagtggtcataaccaacatttatttta--------------------------------------------acaggatgaca----------ctgaatgaaatagaatagg-tagacc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 46644 91 + 69927 caaaccatttgtgagtctgaggccaatgcagtggtcataaccatcgtttatttta--------------------------------------------acaggatgacg----------ttgaatgaaat-gagtagggtagacc i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14813633 91 - 22200726 tagaccac-tgtgagtcaaagatcaattcagtggtcatgaccaacatttatttta--------------------------------------------ataagatggaa----------agggatggaatggaatggattagaac i proCoq1.NW_012133858v1 C 0 I 56 s otoGar3.GL873829 231521 83 + 608964 TAGAACAT---TGACTCAGAGGTGAATTCAGCGGTTATGACCAATATTTATTTTA--------------------------------------------ataggatggaa----------tgggattgaatgggatgggt------ i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32808178 114 + 98207768 -GCCTTGTTTGTGAATCAGAGATCAATCCGATGGT----------GTTTACTTTACTGTGACTGA--TGGGCAGTGT-------------------GACACAGGATGGAATGGAGCCAGGCAGAATTAAATTGAACCAAATAGACC i mm10.chr16 C 0 C 0 s canFam3.chr33 2343203 136 - 31377067 tagcacatatgtgagtcagaaatcaattcagtggtcatgactggcatttattttagtaagatggaatggagcaaaatggatggaagagaatggaaaggaatagaatggaa----------tggaatggaatggaatggaatggaat i canFam3.chr33 C 0 I 30 s dasNov3.JH569502 2720476 82 - 6579706 TAGGccattgataagtcaaagattgattcaggagtcatggccagcattcatttta------------------------------------------------------c----------tagactggaatggaaaaggaaacatc i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88409291 275 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=301279.000000 s hg38.chr3_KI270934v1_alt 87840 95 + 163458 cacatacattgtat---gtaaaagtcaa-------ctgagttc-tttttgaaatttctgttggtttttatacacacagatgcacttactgggtcagagtataaaat s panTro5.chr3 2560124 95 - 202621043 cacatacattgtat---gtaaaagtcaa-------ttgagttc-tttttgaaatttctgttggtttttatagacacagatgcacttactgggtcagagtataaaat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148777 95 - 190779 cacatacattgtat---gtaaaagtcaa-------ttgagttc-tttttgaaatttctgttggtttttatagacacagatgcacttactgggtcagagtataaaat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 102627 95 - 106623 cacatacattgtat---gtaaaagtcaa-------ttgagttc-tttttgaaatttctgttggtttttatacacacagatgcacttactgggtcagagtataaaat i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2874416 95 - 123690457 cacatacgttgtat---gtaaaagtcaa-------ttgagttc-tttttgaaatttctgttggtttttatagacacggatgcacttactgggtcagagtataaaat i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73883274 95 + 74750902 cacatacgctgcat---gtaaaagtaaa-------tggagttc-tttctgaagcttttgttggtttttacacacatggatgcatttactgggtaaaagtataacat i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17318552 92 - 17725628 cacatacactgcgt---gtaaaagtaaa-------cggagttc-tttctgaagtttttgttggtttttacatacatggatacacttactgggtaaaagt---acat i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6411717 95 + 6778120 cacatacgctgcat---gtaaaagtaga-------tggagttc-tttctgaagtttttgttggtttttacgtacatggatgcacttactgggtaaaagtataacat i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 46735 93 + 69927 cacacacactgcat---gtaaaagtaaa-------cagagttc-tttctgaagtttctgttggtttttacacacacggatgcacttactgggtaaaagt--aaaac i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 231604 70 + 608964 --------tgggat---gggatag--aa-------tAGATCt------------ttttatttgtttttatatacatgtatgcctctactaggtcagagtata---- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32808292 82 + 98207768 TGCATGCATTAAAT---ACAAGAATAAG-------TTG-------CTTTAAAAGTTGCCTTAGCTC-------CATGGATGAGTGAACTAGGTCACAGAACAATTA i mm10.chr16 C 0 C 0 s canFam3.chr33 2343369 99 - 31377067 cacatacatcatat---atataattataagttatttggagttcttttttgaaattttt----gtttttatatacatgtacgtgtgcactgaatcaccgtgtataat i canFam3.chr33 I 30 C 0 s dasNov3.JH569502 2720558 97 - 6579706 ctca-acattgtatatcataggagtaaa-------accggttt-tttctttgaaatttgtttgattttatatacatgtatgtatgtactgactgacagtgtagagt i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14813724 56 - 22200726 I e micMur3.chr1 88409291 275 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=417886.000000 s hg38.chr3_KI270934v1_alt 87935 100 + 163458 gtatttattaaagtgaactggggccagaaacgttggaaagccactgATCTAGAGAGATGTCCTCATTGTATAGAC------------------AAGGGGAGAACCTTTTGCCCATG-----------------------GC s panTro5.chr3 2560219 100 - 202621043 gtatttattaaagtgaactggggccagaaacgttggaaagccactgATCTAGAGAGATGTCCTCATTGTATAGAC------------------AAGGGGAGAACCTTTTGCCCGTG-----------------------GC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148872 100 - 190779 gtatttattaaagtgaactggggccagaaacgttggaaagccactgATCTAGAGAGATGTCCTCATTGTATAGAC------------------AAGGGGAGAACCTTTTGCCCGTG-----------------------GC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 102722 98 - 106623 gtatttattaaagc-aactggggccagaaacgttggaaagccactgATCTAGAGAGATGTCCTCATTGTATAGAC------------------AA-GGGAGAACCTTTTGCCCGTG-----------------------GC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2874511 100 - 123690457 gtatttattaaagtgaatgggggccagaaacgttggaaagccactgATCTAGAGAGATGTCCTCATTGTATAGAC------------------AAGGGGAGAACCCTTTGCCCATG-----------------------GC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73883369 122 + 74750902 gtatttattcatgtgaatt-gggccagaaacgtgtgaaagccactgATCTAGACAGATGTCCTCATTGCGTAGAC------------------GAGGGGAGAGCCCTTTTCCGGTGGTCATGCTTCAGTTGTTGACACAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17318644 123 - 17725628 gtatttattaatgtgaattggggccagaaacgtgtgaaagccattgAGCTAGAGAGATGTCCTCATTGCATAGAC------------------AAGGGGAGAGCCCcttgcccgtggtcatgctttagttgttgacacagc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6411812 104 + 6778120 gtatttattaatatgaattggggccagaagcatgtgaaagccactg------------------ATTACGTAGAC------------------AA-AGGAGAGCCCTTTGCCCGTGGTCATGCTTTAGTTGTTGACACAGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 46828 123 + 69927 gtgtttactgatgtgaactggggccagaaacgcgtgaaagccactgATCTACAGAGACGTCCTCATCGTGTAGAC------------------AACGGGAGAGCCCTttgcccacggtcatgctttagttgttgacacagc i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14813780 100 - 22200726 ctatttaataatgtggattggggccagaaacatttgaaagccactgATCTAGAGAGATGCCCTCATTTTATTGAT------------------GAGGGAAGAGCCGTTTGTTCAAG-----------------------GC i proCoq1.NW_012133858v1 I 56 I 18 s otoGar3.GL873829 231674 99 + 608964 gtatttatgaatgtggattggggtcagaaacatttgaaacccactgATCTAGAGAAATGCCCTCATTTAATTCAT------------------GAGCAAAGAGCTATTT-TCCAAG-----------------------GT i otoGar3.GL873829 C 0 I 6 s mm10.chr16 32808374 87 + 98207768 ATGCTTGTAAAAATGGATCGGAGCCAGAAAAGCCTGAAAG-------TCTAGAGAGAGGCTCTCATTCTATAGAT------------------GGAGGATGG------TACCCAAA-----------------------GC i mm10.chr16 C 0 I 6 s canFam3.chr33 2343468 101 - 31377067 atattcattaatgtgaattgtggccagaaaagtttgaaagctactgATctaga----------------------------------------aatggaaaagccgttttccaaaggtcatgcttgagtgggagacagagc i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2720655 141 - 6579706 atattcacaaatatgaactgtggccagaaaagtttgaaagtcactgatctagagcaatctcttcattttagagatggggtagctgacactcagaatggaaaagtaatgtgcccaaggtcatgcttgaattagtgacagagc i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88409291 275 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=34059.000000 s hg38.chr3_KI270934v1_alt 88035 9 + 163458 TGGGAGTCA s panTro5.chr3 2560319 9 - 202621043 TGGGAGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148972 9 - 190779 TGGGAGTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 102820 9 - 106623 TGGGAGTCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2874611 9 - 123690457 TGGGAGTCA i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73883491 9 + 74750902 TGGGAGTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17318767 9 - 17725628 tgggagtca i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6411916 9 + 6778120 TGGCAGGCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 46951 9 + 69927 tgggagtca i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 231779 7 + 608964 --TGAATTG i otoGar3.GL873829 I 6 I 2 s mm10.chr16 32808467 7 + 98207768 --TGAGCTG i mm10.chr16 I 6 I 6 s canFam3.chr33 2343569 9 - 31377067 tgggaggag i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2720796 9 - 6579706 tggaagtag i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14813880 18 - 22200726 I e micMur3.chr1 88409291 275 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=22743.000000 s hg38.chr3_KI270934v1_alt 88044 3 + 163458 AAC s panTro5.chr3 2560328 3 - 202621043 AAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148981 3 - 190779 AAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 102829 3 - 106623 AAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2874620 3 - 123690457 AAC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73883500 3 + 74750902 AAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17318776 3 - 17725628 aac i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6411925 3 + 6778120 AAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 46960 3 + 69927 aac i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 14813898 3 - 22200726 GAC i proCoq1.NW_012133858v1 I 18 C 0 s otoGar3.GL873829 231788 3 + 608964 GAC i otoGar3.GL873829 I 2 C 0 s mm10.chr16 32808480 3 + 98207768 AAC i mm10.chr16 I 6 C 0 s canFam3.chr33 2343578 3 - 31377067 aac i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2720805 3 - 6579706 aac i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88409291 275 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=1147648.000000 s hg38.chr3_KI270934v1_alt 88047 197 + 163458 CAGCAAT-CCTGACCTCTCCCCTGC-TTTCCCACCATATCGTGCTCAGGGTCCTCACTCAAAAAGCCTCTTGTTGCACGTGCTACGG---AGCTC--TGCTGttctctaaacaccctgcatt--------------------------------------ctcctgcctctgagcctttgctcaagctcttccctcgg-cttggaaggcccttccctcccatatccattagaattaaatattc s panTro5.chr3 2560331 195 - 202621043 CAGCAAT-CCTGACCTCTCCCC-GC-TTTCCCACCATATCGTGCTCAGGGTCCTCACTCAAAAAGCCTCTTGTTGCACGTGCTACGG---AGCTC--TGctgttctctaaacaccctgcatt--------------------------------------ctcctgcctctgagcctttgctcaagctgttccctcgg--ttggaaggcccttccctcccatatccattagaattaaatattc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 148984 196 - 190779 CAGCAAT-Cctgacctctccct-gc-tttcccaccatatcgtgctcagggtcctcactcaaaaagcctcttgttgcacgtgctacgg---agctc--tgctgttctctaaacaccctgcatt--------------------------------------ctcctgcctctgagcctttgctcaagctcttccctcgg-cttggaaggcccttccctcccatatccattagaattaaatattc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 102832 196 - 106623 CAGCAATCCctgacctctccct-gc-tttcccaccatatcgtgctcagggtcctcactcaaaaagccttttgttgcacgtgctaccg---agctc--tgctgttctctaaacaccctgcatt--------------------------------------ctcctgcctctgagcctttgctcaagctgttccctcggccttggaaggcc--ttcctcccatatccattagaataaaatattc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2874623 196 - 123690457 CAGCAAT-CCTGACCTCTCCCCTGC-TTTCCCACCATATCGTGCTCAGGGTCCTCACTCAAAAAGCCTCTTGTTGCATGTGCTactg---agctc--tgctgttc-ctaaacaccctgcatt--------------------------------------ctcctgcctctgagcctttgctcaagttgttcccttgg-cttagaaggcccttccctcccatatccattagaacaaaatattc i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73883503 195 + 74750902 CAGCAAT-CCTGACTTCTTCCT-GC-TTTCCCACCACGTTATGCTCAGGATCCTCACTCAGAAAGCCTCTTGTTGCACGTGCTACCG---AGCCC--TGCTGttctccaaacaccctacctt--------------------------------------ctcctgcctctgagcc-ttgctcaagctgttccctctg-cttggaaggctctcccctcccgtatccaTTAGAAGAAAATATTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17318779 196 - 17725628 cggcaat-cctgacttctccct-gc-tttcccaccacgttatgctcagggtcctcactccaaaagcctcttgctgcacgtgctcctg---agccc--tgctgttctctaaacaccctacctt--------------------------------------ctcctgcctctgagcctttgctcgagctgttccctctg-cttggaaggcttttccctcCCGTATCCATTAGAAGAAAATATTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6411928 196 + 6778120 CAGCAAT-CCTGACTTCTccct-gc-tttcccaccacattatgctcagggtcttcactcaaaaagcctcttcttgcacgtgctaccg---agctc--tgctgctctctaaacaccctacctt--------------------------------------ctcctgcctcggagcctttgctccagctcttccctctg-cttggaaggctcttccctcccgtatccattagaagaaaatattc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 46963 196 + 69927 cagcaat-cctgacttctccct-gc-tttcccaccaagttatgctCAGGGTCCTCACTCAGAAAGCCTCTTGCTGCCCGTGCTaccg---agctc--tgctgttctctaaacaccctacctt--------------------------------------ctcctgcctctgagcctttgctcaagctgttccctctg-cttggaaggctcttccctcccgtatccaTTAGAAGAAAATATTC i aotNan1.NW_018503669v1 C 0 N 0 s micMur3.chr1 88409566 200 + 114275543 CAGCAAT-CCTGACTTCTTCCCTGT-TTTCCCTCCACATAGTGCTTAGGCTTCTCACTCAAAAAGCCTCTTGTTGCACATGCTACTAAcgatctc--tgctgttctctaaacagcccgcatt--------------------------------------ctgtggcctctgattctatgcttaagttgtttcttctg-cttagaaggcccttccctcccatacccactagaagaaaatattc i micMur3.chr1 I 275 I 1 s proCoq1.NW_012133858v1 14813901 200 - 22200726 CAGCAAT-CCCGACTTCTTCCCTGC-TTTCCCACCGCATCATGCTCAGGCTTCTTACTCAAAAAGCCTCTTGTTGCACATGCTactgaccatctc--tgctgttctctaaacagcccgcatt--------------------------------------ctctggcctctgagtctttgcttaagctgtttcctccg-cttagaaggcccttccctcccatatccactagaagaaaatattc i proCoq1.NW_012133858v1 C 0 I 1 s otoGar3.GL873829 231791 198 + 608964 CAGCAAT-CCTgatctcttccctgc-tttcccac--catcatgctcaggcttctcactcaaaaagcctcctactacacatgcttctgaccatctc--tgctgttctctgaacagcctgcatc--------------------------------------ctctggcctctgagtctttccttaagctgtttcctttg-cttagaaggcccttccctcccatatccactagaaaaaaatattc i otoGar3.GL873829 C 0 I 1 s mm10.chr16 32808483 142 + 98207768 CTGGAGA-AGCAGCATCTTTCTGGC-TTTCCTATCACCCCGCTCCCAAGAGTGTC-------------------------------------------------------ACACCTTGCCTG--------------------------------------CACCTGCTTCTGAGCCTTGGTGTATGCTGTGTCATCAG-CTTGGGAGGCCTGT-----CCAAATCCATTAGCAGAAATGGTTC i mm10.chr16 C 0 I 1 s canFam3.chr33 2343581 224 - 31377067 cgacaat-tctgactgcctccctgc-tttttccgcac--------cgggcttctcATTCACACAACCTGTTGTTACACTTGCTACCG---ATCTC--TGCCACTCTctcaacaccctgcattaaaaaacaaaacaaaacaaaacaaaaccaccctgcatactgctgctctggagtctttgctcaagctgtctcctctg-t---gtaagcgcttccctcccatagccactaaaggaaagcattc i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 2720808 198 - 6579706 cagcatt-cctgacttctccactgcttttctcactataccatgctTAGGGCTCTCACTCAAAAGCCCTCTTGTTGCACTTAacactg---ctctccttgccattctctgaacaccctgaatt--------------------------------------ctcctgctcttgagactttgcttaagt--tttactcta-attggaagatcctttccttccatattaactagaagaaagcatcc i dasNov3.JH569502 C 0 I 1 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=8281.000000 s hg38.chr3_KI270934v1_alt 88244 1 + 163458 t s panTro5.chr3 2560526 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 149180 1 - 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 103028 1 - 106623 t i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2874819 1 - 123690457 t i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73883698 1 + 74750902 T i calJac3.chr17 C 0 I 5474 s saiBol1.JH378146 17318975 1 - 17725628 T i saiBol1.JH378146 C 0 I 4318 s cebCap1.NW_016107444v1 6412124 1 + 6778120 t i cebCap1.NW_016107444v1 C 0 I 5169 s micMur3.chr1 88409767 1 + 114275543 t i micMur3.chr1 I 1 C 0 s proCoq1.NW_012133858v1 14814102 1 - 22200726 t i proCoq1.NW_012133858v1 I 1 C 0 s otoGar3.GL873829 231990 1 + 608964 t i otoGar3.GL873829 I 1 C 0 s mm10.chr16 32808626 1 + 98207768 T i mm10.chr16 I 1 C 0 s canFam3.chr33 2343806 1 - 31377067 t i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 2721007 1 - 6579706 t i dasNov3.JH569502 I 1 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=134975.000000 s hg38.chr3_KI270934v1_alt 88245 48 + 163458 atgcttcaaggcagcatttgaagacaacttccccCGgggtgccgagga s panTro5.chr3 2560527 48 - 202621043 atgcttcaaggcagcatttgaagacaacttcccccggggtgccgagga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 149181 48 - 190779 atgcttccaggcagcatttgaagacaacttcccccggggtgccgagga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 103029 47 - 106623 atgcttcaaagcAGCATTTGAAGACAACTT-CCCCGgggtgctgagga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2874820 48 - 123690457 atgcttcaaggcGGCATTTGAAGACAACTTCCCCCagggtgctgagga i nomLeu3.chr11 C 0 C 0 s micMur3.chr1 88409768 48 + 114275543 atacttcaaggctgcacttgactccaacctccccAGggttgccaagga i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 14814103 48 - 22200726 gtacttcaaggctgcatttgactccagcctccccAGGGTTGCCAAGGA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 231991 48 + 608964 atacttcaaggctgcatttaaatccaacctctccagggttgctaagga i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32808627 48 + 98207768 ACATATCAAGGTCACACTTGAACCCAGCCTTCCttcagctataaagga i mm10.chr16 C 0 I 1273 s canFam3.chr33 2343807 48 - 31377067 ctccttcaagGTCATGTTTaaattcattcttccctgggttgctaagga i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2721008 48 - 6579706 gtacttcaaggtcacatttaaattccacctttacagaaTTGCTAAGGC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17318976 4318 - 17725628 I e calJac3.chr17 73883699 5474 + 74750902 I e cebCap1.NW_016107444v1 6412125 5169 + 6778120 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=233504.000000 s hg38.chr3_KI270934v1_alt 88293 86 + 163458 gctagctcattattatgaagatgaaaaataaagaatcaaacattgatccagcctttccatccaagccaaatagttgacaagggaaa-------------- s panTro5.chr3 2560575 86 - 202621043 gctagctcattattatgaaaatggtaagtaaagaatcaaacattgatccagcctttccatccaagccaaatagttgacaagggaaa-------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 149229 86 - 190779 gctagctcattattatgaaaatggtaagtaaagaatcaaacattgatccagcctttccatccaagccaaatagttgacaagggaaa-------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 103076 84 - 106623 gctagctcattattatgaaaatgataa-taaagaatcaaacattgatccagcctttccatccaagcc-aatagttgacaagggaaa-------------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2874868 86 - 123690457 gctagctcattattacgaaaatgataaagaaagaatcaaacattgatccagcctttccatccaagcaaaatagttgacaagggaaa-------------- i nomLeu3.chr11 C 0 C 0 s micMur3.chr1 88409816 86 + 114275543 gctagctcattattatgaaagtcataaatacagactcaaacatttatccagcctttctgtacaaaccaaatagttgataagggaaa-------------- i micMur3.chr1 C 0 I 2814 s proCoq1.NW_012133858v1 14814151 86 - 22200726 ACTAGCTCATTATCATGAAAGTCATAAATGCAGACTCCAACATTTATCCAGCCTTTCTGTACAaaccaaatagttgataagggaaa-------------- i proCoq1.NW_012133858v1 C 0 I 2749 s otoGar3.GL873829 232039 82 + 608964 gctagctcgttattatgaaagtcataa----agactcagacatttatctagcctttccatgcaaaccaaatagctgataagggaaa-------------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2343855 86 - 31377067 acaggctcattatcctgaaaatggtaaatgaagaattaaacatttatccagcctttccatacaagccaagtggttgacaagggaaa-------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2721056 83 - 6579706 -----------------AATAAGGCAATAaatgaatcaaatgtttatccagtttttccatacaaaccaaagagttgatgaggaaatagttgatgaggaaa i dasNov3.JH569502 C 0 C 0 e mm10.chr16 32808675 1273 + 98207768 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17318976 4318 - 17725628 I e calJac3.chr17 73883699 5474 + 74750902 I e cebCap1.NW_016107444v1 6412125 5169 + 6778120 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=70961.000000 s hg38.chr3_KI270934v1_alt 88379 52 + 163458 tatcttcacgacagaga-accttcggctaacaagtgcagaaag-aatga------tagaa s panTro5.chr3 2560661 52 - 202621043 tatcttcacgatagaga-accttcggctaataagtgcagaaag-aatga------tagaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 149315 52 - 190779 tatcttcacgatagaga-accttcggctaacaagtgcagaaag-aatga------tagaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 103160 52 - 106623 tatcttcatgatagaga-accttcggctaacaagtgcagaaag-aatga------tagaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2874954 52 - 123690457 tatcttcacgatagaga-aacttcggccaacacgtgcagaaag-aacaa------tagaa i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 232121 55 + 608964 ggtcttgctgataaaaagaactccagctaataaacacagaaagtgacaa-----ttagaa i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2343941 55 - 31377067 agtcttt---atagaag-aattgcagctaagaaatgcagaagg-agtgacagagctagaa i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2721139 52 - 6579706 ggtcttctttttggaag-aattctagctaataaatgcagaaga-catga------tagaa i dasNov3.JH569502 C 0 I 2056 e proCoq1.NW_012133858v1 14814237 2749 - 22200726 I e mm10.chr16 32808675 1273 + 98207768 I e micMur3.chr1 88409902 2814 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17318976 4318 - 17725628 I e calJac3.chr17 73883699 5474 + 74750902 I e cebCap1.NW_016107444v1 6412125 5169 + 6778120 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=192197.000000 s hg38.chr3_KI270934v1_alt 88431 158 + 163458 aagcactacttggcagcccctaatg-agaagtggatctcagcac-------------------aaatcattagtggacag----------aattttataatgggtgcac--------tatctggtggatgaagttt-aacaccagtaaaagtgggacagctggacactttgtgtctccttcgaggtgcgataggaag s panTro5.chr3 2560713 158 - 202621043 aagcaccacttggcagcccctaatg-agaagtggatctcagcac-------------------aaatcattagtggacag----------gattttataatgggtgcac--------tatctggtggatgaagttt-aacaccagtaaaagtgggacagctggacactttgtgtctccttcaaggcgcgataggaag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 149367 158 - 190779 aagcaccacttggcagcccctaatg-agaagtggatctcagcac-------------------aaatcattagtggacag----------gattttataatgggtgcac--------tatctggtggatgaagttt-aacaccagtaaaagtgggacagctggacactttgtgtctccttcaaggcgcgataggaag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 103212 157 - 106623 aagcactacttggcag-ccctaatg-agaagtggatctcagcac--------------------aatcattagtggacag----------aattttataatgggtgcac--------tatctggtggatgaagtttaaacaccagtaaaagtgggacagctggacactttgtgtctccttcgaggtgcgataggaag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2875006 158 - 123690457 aagcactacttggcagcccctaata-aaaagtggatctcagcac-------------------aaatcattagtggacag----------aattttataatgggtgcac--------tatctggtggatgaagttt-aacaccagtaaaagtgggacagctggacactttgtgtctccttcgaggcacaataggaag i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 232176 188 + 608964 aaacaccacatggtaagccctaatgaaaaaacggatccaagcaaccatcaacagtggagactaaaaccattagagaagagttgatggggaacttttataatggatgtgc--------tatttggctggccaagttt-aaagccagtaaaagagggacaactagacattttgtgtctctttcaagacacaataaaaat i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2343996 191 - 31377067 agccagcattcggtgacccataa-g-aaaattggatctaagcaa-caatcaacgccgggattaaaaccactggagaaaggttgcaggggaatgtttataagggacctacaacagatgcatctggcagatcaaggtt-aaca-tagc-aaggtgggaccactggacttcgggtgtcttctttgggatgcaacaggaag i canFam3.chr33 C 0 I 234 e proCoq1.NW_012133858v1 14814237 2749 - 22200726 I e mm10.chr16 32808675 1273 + 98207768 I e micMur3.chr1 88409902 2814 + 114275543 I e dasNov3.JH569502 2721191 2056 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17318976 4318 - 17725628 I e calJac3.chr17 73883699 5474 + 74750902 I e cebCap1.NW_016107444v1 6412125 5169 + 6778120 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=44600.000000 s hg38.chr3_KI270934v1_alt 88589 49 + 163458 ta------cccacctatggattcttcctgcc-taagaaatctccagtcctg--------atctc s panTro5.chr3 2560871 49 - 202621043 ta------cccacctatggattcttcctgcc-aaagaaatctccagtcctg--------atctc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 149525 49 - 190779 ta------cccacctatggattcttcctgcc-aaagaaatctccagtcctg--------atctc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 103369 49 - 106623 ta------cccacctatggattcttcctgcc-aaagaaatctccagtcctg--------atctc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2875164 54 - 123690457 ta------cccatctatggattcttcctgtc-aaagaaatctccagtcctg---atttcatctc i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 232364 64 + 608964 tacacaacctcacctatggaagattcttgccaaaagaaACagccaactattaaaaaggcatttt i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14814237 2749 - 22200726 I e mm10.chr16 32808675 1273 + 98207768 I e micMur3.chr1 88409902 2814 + 114275543 I e dasNov3.JH569502 2721191 2056 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17318976 4318 - 17725628 I e calJac3.chr17 73883699 5474 + 74750902 I e cebCap1.NW_016107444v1 6412125 5169 + 6778120 I e canFam3.chr33 2344187 234 - 31377067 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=236583.000000 s hg38.chr3_KI270934v1_alt 88638 244 + 163458 aactaccagagttcaggaaagacagagg-cagagggacatccacaaagat-tcaatcagtcaaacccagaaggt-aggatatgccgcaggacacagtacctggttcgttcaac-agctaaatgaca-------tgaa--------aaaatggcactgatctaggt---atagatttaaagacatttaagaaatat-----gctagttaaacat-gtgtgcg-tatcttttttggatcttgacttgaataaaccagctgtaaaaaggcattttt s panTro5.chr3 2560920 242 - 202621043 aactaccagagttcaggaaagacagagg-cagagggatatccacaaggat-tcaatcagccaaacccagaaggt-aggatatgctgcaggacacagtacctggtttgttcaac-aactaaatgaca-------tgaa--------aaaatggcactgatctaggt---atagatttaaagacatttaagaaatat-----gctagttaaac---gtgtgca-tatcttttttggatcttgacttgaataaaccagctgtaaaaaggcattttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 149574 242 - 190779 aactaccagagttcaggaaagacagagg-cagagggacatccacaaggat-tcaatcagccaaacccagaaggt-aggatatgccgcaggacacagtacctggttcgttcaac-aactaaatgaca-------tgaa--------aaaatggcactgatctaggt---atagatttaaagacatttaagaaatat-----gctagttaaac---gtgtgca-tatcttttttggatcttgacttgaataaaccagctgtaaaaaggcattttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 103418 246 - 106623 aactaccagagttcaggaaagacagagg-cagaaggacatccacaaagat-gcaatcagccaaacccagaaggtaaggatatgccgcaggacacagtacctggttcgttcaacaaactaaatgaca-------tgaa--------aaaatggcactgatctaggt---atagatttaaagacatttacgaaatat-----gctagttaaacat-atgtgcg-tatcttttttggatcttgacttgaataaaccagctgtaaaaaggcattttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2875218 245 - 123690457 aattaccagatttcaggaaagacggagg-cagagcgacatccacaaagat-tcaatcagccaaacccagaaggt-aggatatgccgcgggacacagtgcctggttcgttcaac-aactaaatgaca-------tcaa--------aaaatggcactgatctaggt---atagatttaaagacatttaagaaatat-----gctagttaaacat-gtgtgcgttatcttttttggatcttgacttgaagaagccagctgtaaaaaggcgttttt i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 232428 192 + 608964 aac------aagtgaggaa--ataggaa-tagtgatagataccaaatgatagcaattattttagctctga---t-aaagtat---------catagttat--gttttttaaat-a--tgaaagata-------agaa----------------cctgagcaaaatttgataattttgaagctggttaacaggtacattgagttcattatac-----------tattctctct--acctttgcttgtg---------tttgaaaa--------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2344421 252 - 31377067 aattaccaggtttcagcaaatgtaggggacagaggggcatccacatgggt-tcaatcagataaatccagagtgt-aggacattctacagaacaaatcacctggtttattcaat-aattaaaaaaaaaacagcttgaagaaaaaggaaaaggggactg-----------atagatttgaaggggcttaagaaatat-----accagttaaatataacttgtg-gaccttgtttggatcctga-ttggataagccaattgcaaaaaggtcttttt i canFam3.chr33 I 234 I 1572 e proCoq1.NW_012133858v1 14814237 2749 - 22200726 I e mm10.chr16 32808675 1273 + 98207768 I e micMur3.chr1 88409902 2814 + 114275543 I e dasNov3.JH569502 2721191 2056 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17318976 4318 - 17725628 I e calJac3.chr17 73883699 5474 + 74750902 I e cebCap1.NW_016107444v1 6412125 5169 + 6778120 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=247989.000000 s hg38.chr3_KI270934v1_alt 88882 325 + 163458 ctttctttc---------------------tttttttttttttttt--------------------ttttttttttttgagacatggtctcactcggtgcagcagactggaatgcagtggtatggtcacagctc------gctgcagccgcaactt--ctggggctcaagcaattttctcacttca--gccttctgaata--------------gctgggacta-------------------------taggtgaacatcaacacac-cttgctaatttttaaacaa------------attttttttttgtagagactgagtctcgctattgtaccc-----------------aggctggtctca-----------aactcctgagctccagtgatcctcccaccttggcctcccaaagtgctgggactacaggcatcagccaccacatctga s panTro5.chr3 2561162 312 - 202621043 ctttctttc--------------------------------tttct--------------------ttttttttttttgagacatggtctcactcggtgcagcagactggaatgcagtggtatggttacagctc------gctgcagccgcaacct--ctggggctcaagcaattttctcacttca--gccttctgaata--------------gctgggacta-------------------------taggtgaacatcaacacac-----ctaatttttaaacaa----------tttttttttttttgtagagactgagtctcgctattgtaccc-----------------aggctggtctca-----------aactcctgagctccagtgatcctcccaccttggcctcccaaagtgctgggactacaggcatcagccaccacatctga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 149816 318 - 190779 CTTTCtttc-----------------------ttttctttcttttt--------------------ttttttttttttgagacatggtctcactcggtgcagcagactggaatgcagtggtatggttacagctc------gctgcagccgcaacct--ctggggctcaagcaattttctcacttca--gccttctgaata--------------gctgggacta-------------------------taggtgaacatcaacacac-----ctaatttttaaacaa-------------atttttttttgtagagactgagtctcgctattgtaccc-----------------aggctggtctca-----------aactcctgagctccagtgatcctcccaccttggcctcccaaagtgctgggactacaggcatcagccaccacatctga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 103664 320 - 106623 ctttctttc--------------------------tttttttcttt--------------------ttttttttttttgagacatggtctcactcggtgcagcagactggaatgcagtggtatggtcacagctc------gctgcagccgcaaccc--tctgggctcaagcaattttctcacttca--gccttctgaata--------------gctgggacta-------------------------ta-gtgaacatcaacacacccttgctaatttttaaacaa------------attttttttttgtagagactgagtctcgctactgtaccc-----------------aggctggtctca-----------aactcctgagctccagtgatcctcccaccttggcctcccaaagtgctgggactacaggcatcagccaccacatctga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2875463 337 - 123690457 ctttctttctttctttctttctttctttctttctttctttctttctttcgttcgttcgttctttcGttttttttttttgagacatggtctcactcagtgcagcagactggaatgcagtggtacgatcacagctc------gctgcagctgcaacct--ctggggctcaagcaattttcc------------------------------------------cta-------------------------taggtggacatcaacacac-cttgctaatttttaaacaa---------------aattttttgtagcgactgagtcttactattgtaccc-----------------aggctggtctca-----------aactcctgagctccagtgatcctcccaccttggcctcccaaagtgctgggactacaggcatcagccaccgcacctga i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 232620 392 + 608964 ----ttttt--------------------------------ttttt--------------------ttttttttggccggggctgggtttgaacc--tgccacct-ctggcatatag-ggcgggcaccctactcctttgagccacaggcactacccTGCTTGTGTTTGA--AATTTTCCATTATAAATGGTTTTTAAAAATAAATTAGATCTATGCTGGGACTAATTTTTTCCCTCTACCCTGAAAACCTATTCTAACAT-AGCATTC-ATTCCTATCTCTATTACGCTTTATTATTATTAttttttttttttagagatggagtctcattttgtcacccttggtagagtgctgtggaggcacaactcacagaaacttccagctcttggacttaggcaatactcttgcctcagcctcccaagtagctgggactataggcacccaccacaacacccgg i otoGar3.GL873829 C 0 I 514 e proCoq1.NW_012133858v1 14814237 2749 - 22200726 I e mm10.chr16 32808675 1273 + 98207768 I e micMur3.chr1 88409902 2814 + 114275543 I e dasNov3.JH569502 2721191 2056 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17318976 4318 - 17725628 I e calJac3.chr17 73883699 5474 + 74750902 I e cebCap1.NW_016107444v1 6412125 5169 + 6778120 I e canFam3.chr33 2344673 1572 - 31377067 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=501381.000000 s hg38.chr3_KI270934v1_alt 89207 572 + 163458 tcttattttttctttttctcttctgctttgctgctgaataacaagatatttttgacaagtgggggaaatatgaacactgataggtattaaacgatagtaagtagttttttaaattaattaattaattaattttttttttaaagacagagtcttgctctgttgcccaggctggagtgcagtggcgcaatctcggctcactgcaacctccacctccctggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggtacccgccaccatgcctagctaatttttgtatttttagtagacacaggggtttcaccatgttggccaggctggtcttgaacttctggcctcaggcgatctgcccgcctcagtctctcaaagtgttgggattacaggtgtgcgaccatatttgttttggctctgataaggtattgtggttatattttttaaatatgggggataagagcttgagcataatgttgataatattgaaggtggccaactggtaccttgggttcatcatcctattctctttacttttgcatgtgtttgaatttttccacaat s panTro5.chr3 2561474 572 - 202621043 cctttttttttctttttctcttctgctttgctgctgaataacaagatatttttgacaagtgggggaaatatgaacactgataggtattaaatgatagtaagtagtttttaaaattaattaattaattagtttttttttaaaagacagagtcttgctctgttgcccaggctggagtgcagtggtgcaatctcggctcactgcaacctccacctccctggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggtacccgccaccatgcctagctaatttttgtatttttagtagacacaggggtttcaccatgttggccaggctggtgttgaatttctggcctcaggtgatctgcccgcctcagtctctcaaagtgttgggattacaggtgtgcggccatatttgttttggctctgataaggtattgtggttatattttttaaatatgggggataagagcttgagcataatgttgataatattgaaggtggccaaccggtaccttgggttcatcatcctattctctttacttttgcatgtgtttgaatttttccacaat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 150134 571 - 190779 ccTT-TTTTTTCTTTTTCTCTTCTGCTTTGCTGCTGAATAACAAGATATTTTTGACAAGTGGGGGAAATATGAACACTGATAGGTATTAAATGATAGtaagtagttttttaaattaattaattaattaGtttttttttaaaagacagagtcttgctctgttgcccaggctggagtgcagtggtgcaatctcggctcactgcaacctccacctccctggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggtacccgccaccatgcctagctaatttttgtatttttagtagacacaggggtttcaccatgttggccaggctggtcttgaatttctggcctcaggtgatctgcccgcctcagtctctcaaagtgttgggattacaggtgtgCGGCCATATTTGTTTTGGCTCTGATAAGGTATTGTGGTTATATTTTTTAAATATGGGGGATAAGAGCTTGAgcataatgttgataatattgaaggtggccaaccggtaccttgggttcatcatcctattctctttacttttgcatgtgtttgaatttttccacaat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 103984 569 - 106623 ccTTTTTTTTTCTTTTTCTCTTCTGCTTTGCTGCTGAATAACAAGATATTTTTGACAAGTGGGGGAAATATGAACACTGATAGGTATTAAATGATAGTAAGTAGTTTTTAAAATTAATTAATTAATTAAttttttttttaaagacagagtcttgctctgttgcccaggctggagtgcagtggcgcaatctcggctcactgcaacctccacctccctagttcaagtgattctcctgcctcagcctcccaagtagctgggattacaggtacccaccaccatgcctagctaatttttgtatttttagtagacacaggggtttcaccatgttggccaggctggtcttg-acttctggcctcaggtgatctgcctgcctcagtctctcaaagtgttgggattacaggtgtgCGGCCATATTTGTTTTGGCTC-GATAAGGTATTGTGGTTATATTTTTTAAATATGGGGGataagagcttgagcataatgttgataatattgaaggtggccaactggta-cttgggttcatcatcctattctctttacttttgcatgtgtttgaatttttccacagt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2875800 566 - 123690457 cctttttttttctttttctcttctgctttgctgctgaa-aaaaagatatttttgacaagtgggggaaatatgaacactgataggtattaaatgatagtaagtagttttta-----aattaattaattatttttttttttagagacagagtcttgctctgttgcccaggctggagtgcagtggtgcaatcttggctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcacccgccaccatgcctagctaatttttgtatttttggtagagacaggggtttcaccatgttggccaggctggtcttgaactcctggcctcaggtgatctgcctgcctcagtctcccaaagtgttgggattacaggtgtgcagccatatttgttttggctctgataaggtattgtggttatattTTTCAAATATGGGGGATAAGAGCTTGAgcaaaatgttgataattttgaagctggccagctggtaccttgggttcatcatcctattctctctacttttgcgtgtgtttgaatttttccataat i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 14814237 2749 - 22200726 I e mm10.chr16 32808675 1273 + 98207768 I e micMur3.chr1 88409902 2814 + 114275543 I e dasNov3.JH569502 2721191 2056 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17318976 4318 - 17725628 I e calJac3.chr17 73883699 5474 + 74750902 I e cebCap1.NW_016107444v1 6412125 5169 + 6778120 I e canFam3.chr33 2344673 1572 - 31377067 I e otoGar3.GL873829 233012 514 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=10716.000000 s hg38.chr3_KI270934v1_alt 89779 24 + 163458 aaatagctTTGGG---ttttttttttt s panTro5.chr3 2562046 25 - 202621043 aaatagctTTGGG--tttttttttttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 150705 16 - 190779 aaatagctTTGGG-----------ttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 104553 27 - 106623 aaatagCttttggtttttttttttttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2876366 22 - 123690457 aaatagttT--GG---ttttctttttt i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 233526 24 + 608964 GAAGAGAGTTACA---TCTCtttttct i otoGar3.GL873829 I 514 C 0 e proCoq1.NW_012133858v1 14814237 2749 - 22200726 I e mm10.chr16 32808675 1273 + 98207768 I e micMur3.chr1 88409902 2814 + 114275543 I e dasNov3.JH569502 2721191 2056 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17318976 4318 - 17725628 I e calJac3.chr17 73883699 5474 + 74750902 I e cebCap1.NW_016107444v1 6412125 5169 + 6778120 I e canFam3.chr33 2344673 1572 - 31377067 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=13468.000000 s hg38.chr3_KI270934v1_alt 89803 11 + 163458 tttttttcctg s panTro5.chr3 2562071 11 - 202621043 tttttttcctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 150721 11 - 190779 tttttttcctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 104580 11 - 106623 tttttttcctg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2876388 11 - 123690457 ttttttttttg i nomLeu3.chr11 C 0 I 2329 s calJac3.chr17 73889173 11 + 74750902 TTCTTTCCCCG i calJac3.chr17 I 5474 I 4 s otoGar3.GL873829 233550 8 + 608964 ---tgtttttg i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 14814237 2749 - 22200726 I e mm10.chr16 32808675 1273 + 98207768 I e micMur3.chr1 88409902 2814 + 114275543 I e dasNov3.JH569502 2721191 2056 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17318976 4318 - 17725628 I e cebCap1.NW_016107444v1 6412125 5169 + 6778120 I e canFam3.chr33 2344673 1572 - 31377067 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=496374.000000 s hg38.chr3_KI270934v1_alt 89814 283 + 163458 agatggagtctccctctgtcacccaggctagagcgcagtggcgcaatctcgggtcactgcaacctctgtctcccaggttcaagtgattctcctgcctcagcctcccaagtagctggga------ttacaggcacccaccaccacacctggctaatttttgta-ttttaatagcgatggtatttcaccatgttacccaggctggtcttg-aactcctgacctcaagtgatccacccgtctcggcctctcaaagtgctgggattacaggcgtgagccaccgcacccagccAAG s panTro5.chr3 2562082 283 - 202621043 agatggagtctccctctgttacccaggctagagcgcagtggcacgatctcgggtcactgcaacctctgtctcccaggttcaagtgattctcctgcctcagcctcccaagtagctggga------ttacaggcacccaccaccacacctggctaatttttgta-ttttaacagcgatggtatttcaccatgttacccaggctggtcttg-aactcctgacctcaagtgatgcacccgtctcggcctctcaaagtgctgggattacaggcgtgagccaccgcacccggccAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 150732 282 - 190779 agatggagtctccctctgtcacccaggctagagtgcagtggcacgatctcgggtcactgcaacctctgtctcccaggttcaagtgattctcctgcctcagcctcccaaatagctggga------ttacaggcacccaccaccacacctggctaa-ttttgta-ttttaacagcgatggtatttcaccatgttacccaggctggtcttg-aactcctgacctcaagtgatgcacccgtctcggcctctcaaagtgctgggattacaggcgtgagccaccgcacccggccAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 104591 279 - 106623 agatggagtctccctctgtcacccaggcta-agcg-agtggcgtgatctcgggtcactgcaacctctgtctcccaggttcaagtgattctcctgcctcagcctcccaagtagctggga------ttacaggcacccaccaccacacctggctaatttttgta-ttttaatagcgatggtatttcaccatgtta-ccaggctggtcttgaaactcctga-ctcaagtgatccacccgtct-ggcctctcaaagtgctgggatcacaggcgtgagccaccgcacccggccAAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2878728 284 - 123690457 agatggagtctccctctgtcacccaggctggagcacagtcacgccatctcggctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccaagtagctggga------ttacaggcacccaccaccacacctggctaatttttgtatttttagtagcgatggtatttctccatgttagccaggctggtcttg-aactcctgacctcaagtgatccatccatctcagcttctcaaagtgctgagattacaggcgtgagccactgcgcccggccAAG i nomLeu3.chr11 I 2329 C 0 s calJac3.chr17 73889188 288 + 74750902 agacagaatctccctctgccgcccaggctggagtgcagtggtgagatattggctcactgcaacctccacctcccagattcaagtgattcccctgtctcagcctcccaagtagctgagacaaggcctacaggtgtgcaccaccgcatccggctaatttttgtatttttaatagagatggggtttcaccatgttggccagggtggtcttg-aactcctgacctc--gtgatctgcccaagtcagcctctcaaagtgctgggattatagatgtgagccaccacacccggccAAG i calJac3.chr17 I 4 C 0 s saiBol1.JH378146 17323294 282 - 17725628 agacagaatctccctctgtcacccaggctggagtgcagtggtgaaatactggcccactgcagcctccacctcccaggttcaagtgattcgcctgcctcagcctcccaagttgctggga------ctacaggcgtgcaccaccacatctggctaatttttgtatttttaatagagatggggtttcgccatgttggccaggctggtcttg-aactcctgacctc--atgatctgcctgcctcggcctctcaaagtgctgggattatagatgtgagccacctcgcccggccAAA i saiBol1.JH378146 I 4318 C 0 s otoGar3.GL873829 233558 209 + 608964 agacagagtctcactttgtcaccctctgtagagtgctgtagt---atcatagctcacaggaacctcaaactcttgggctcaagtgattctcttgcctaagcctcccaagtagctggga------ctacaggtgcctgccacaatgcccagctattttttagA-----------GATG--------------------------------AA------------------------------gtctcccagagtgctaggattataggaatgagccactgcccctggccTAG i otoGar3.GL873829 C 0 I 1316 e proCoq1.NW_012133858v1 14814237 2749 - 22200726 I e mm10.chr16 32808675 1273 + 98207768 I e micMur3.chr1 88409902 2814 + 114275543 I e dasNov3.JH569502 2721191 2056 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e cebCap1.NW_016107444v1 6412125 5169 + 6778120 I e canFam3.chr33 2344673 1572 - 31377067 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=611366.000000 s hg38.chr3_KI270934v1_alt 90097 400 + 163458 AAGTAcagccttgtgccacatcacgatgtttagaccgatgatggaccatatatatgacggtggccccataagattataatagggcatatgcagaaacccgatatatggtgctcgatattggccttgaggatcaagcaggggaaatgactgatgttcagtaatgggacatgtgctgggacatgtggctttccatgtggaaaacaaacatgtaaataaatatatatataaaccatctaggtttatgtaaactct-cgatttcattgttgtgtgaactctatgatattcatacaacaaagaaatcatctgatgatgcatttctcagaatgtgtctccatc---attaagcaacagctgactgTGTTCCTACCAATGACATCTAGTTTTCTCCCAAGAGAAGTTCTAG s panTro5.chr3 2562365 400 - 202621043 AAGTAcagccttgtgccacatcacgatgtttagaccgatgatggaccatatatatgacggtggccccgtaagattataatagggcatatgcagaaacccgatatatggtgctcgatattggccttgaggatcaagcaggggaaatgactgatgttcagtaatgggacatttgctgggacatgtggctttccatgtggaaaacaaacacgtaaataaatatatatatataccatctaggtttatgtaaactct-cgattttattgttgtgtgaactctatgatattcatacaacaaagaaatcatctgatgatgcatttctcagaatgtatctccatc---attaagcaacagctgactgTGTTCCTACCAATGACATCTAGTTTTCTCCCAAGAGAAGTTCTAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 151014 400 - 190779 AAGTAcagccttgtgccacatcacgatgtttagaccgatgatggaccatatatatgacggtggccccgtaagattataatagggcatatgcagaaacccgatatatggtgctcgatattggccttgaggatcaagcaggggaaatgactgatgttcagtaatgggacatttgctgggacatgtggctttccatgtggaaaacaaacatgtaaataaatatatatatataccatctaggtttatgtaaactct-cgattttattgttgtgtgaactctatgatattcatacaacaaagaaatcatctgatgatgcatttctcagaatgtatctccatc---attaagcaacagctgactgTGTTCCTACCAATGACATCTAGTTTTCTCCCAAGAGAAGTTCTAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 104870 399 - 106623 AAGTAcagccttgtgccacatcacgatgtttagaccgatgatggaccatatatatgacggtggccctgtaagattataatagggcatatgcagaaacccgatatatggtgctcgatattggccttgaggatcaagcaggggaaatgactgatg-tcagtaatggaacatttgctgggacatgtggctttccatgtggaaaacaaacatataaat-aatatatatatataccatctaggtttatgtaaactctccgatttcattgttgtgtgaactctacgatattcatacaacaaggaaatcatctgctgatgcatttctcagaatgtatctccatc---attaagcaacagctgactgTGTTCCCTACAACGACATCTAGTTTTCTCCCAAGAGAAGTTCTAg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2879012 393 - 123690457 AAGTAcagccttgtgccacatcatgatgtttagaccgatgatggaccatatatatgacggtggccctgtaagattataatagggcagatgcagaaacccaatatatggcacttgatattggccttgaggatcaagcaggggaaatgactgatattgagtaatgggacatttgctgggacatgtggctttccatttggaaaacaaacatataaataaatatatat----accatctaggtttatgtaaactct-ggatttca---ttgtgtgaactctatgatattcatacaaaaatgaaatcgtctgatgatgcatttctcagaatgtatctccatc---attaagcaacagctgactgTGTTCCCACCAATGACATCTAGTTTTCTCCCAAGAGAAGTTGTAG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73889476 391 + 74750902 AAGAATACtcttgcaccacataatgatgtttagaccaatgaggaaccatatatatgacggcggtcccgtaagagtataatagggcgtatgcagaaacccagtagatgccacttgatactggcattgtgggtcaagcaggggaaatgactgat----agtaacgggacatttgctgggacacttggcttctcatgtggaaaacatacttataaataaaaatacatat--attatctaggtttatgtaaactct---gtttcattgccgtgtgaactctctggtgttcatacaacagtgaaactgtctgatgatgcgtttcttagaatgaatctccattatcaTTAC-TATTACCTGACTATGTTCCTTCCAGTGACATCTACTTATCTCCCAAGAG-AGCTCT-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17323576 392 - 17725628 AAGTATGCtcttgcactacataatgatgtttagaccaatgaggtaccacatatatgacagtggtcctgtgagattataatagggcatatacagaaacccaatagatgccacttgatactggcattgtgggtcaagtaggggaaatgactgatactcagtaacgagacattttctgggacacttggcttttcatgtggaaaacatacatataaataaaaatatatat--attatctaggtttatgtaaactct---gtttcactgctgtgtgaactctatggcgttcatacaacaatgaaaccatctgatgatgcatttcttagaatgaatctccatt---attaa-CATTACTTGACTAtgttacttccagtaacatctagttatctcccaagag-agctct-- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 14814237 2749 - 22200726 I e mm10.chr16 32808675 1273 + 98207768 I e micMur3.chr1 88409902 2814 + 114275543 I e dasNov3.JH569502 2721191 2056 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e cebCap1.NW_016107444v1 6412125 5169 + 6778120 I e canFam3.chr33 2344673 1572 - 31377067 I e otoGar3.GL873829 233767 1316 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=585906.000000 s hg38.chr3_KI270934v1_alt 90497 324 + 163458 ggccaggcacggtggctcacacctgtaatcccaacactttgggaggcggaggtgggcagatcacctgaagtcagaagttcaagactagcctggctaacatggcgaaaccctgtctctatttaaaatgccaaaaattagccaggcatggtggtgcatgcctataatcccagct-actcgggaggctgaggcaggagaatggcttgaacccagaaggtggaggttgcagtgagccgagatcgtaccactgcactccagcctggcgggggac-agagc-agactctgtctggaaaaaaaaaaattaaaaagagagagagaggagagagag s panTro5.chr3 2562765 309 - 202621043 ggccaggcatggtggctcacgcctgtaatcccaacactttgggaggcggaggtgggcagatcacctgaagtcagaagttcaagactagcctggctaacatggcgaaaccctgtctctatttaaaatgccaaaaattagccaggcatggtggtgcatgcctataatcccagct-actcgggaggctgaggcaggagaatggcttgaacccagaaggtggaggttgcagtgagccgagatcgtaccactgcactccagcctggcgggggac-agagc-agactctgtctgaaaaaaaaaaaa--aaaa-------------agagagag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 151414 310 - 190779 ggccaggcacggtggctcacgcctataatcccaacactttgggaggcggaggtgggcagatcacctgaagtcagaagttcaagactagcctggctaacatggcgaaaccctgtctctttttaaaatgccaaaaattagccaggcatggtggtgcatgcctataatcccagct-actcgggaggctgaggcaggagaatggcttgaacccagaaggtggaggttgcagtgagccgagatcgtaccactgcactccagcctggtgggggac-agagc-agactctgtctgaaaaaaaaaaaa--aaaa------------GAGAGAGAg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 105269 308 - 106623 gg-caggcacagtggctcacacctgtaatcccaacactgtgggaggcggaggtgggcagatcacctgaagtcagaagttcaagactagcctggctaacatggtgaaaccctgtctctatttaaaatg-caaaaattagccaggcatggtggtgcatgcctataatcccagctaactcgggaggctgaggcaggagaatggcttgaacccagaaggtggaggttgcagtgagccgagatcgtaccactgcactccag-ctggtgggggac-agagc-aga-tctgtctgaaaaaaaaaaaa--gaga-----------gaaGAGAGAg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2879405 301 - 123690457 ggccgggca--gtgactcaggcctgtaatcccagcactttgggaggtggaggcgggcagatcacctgaagtcagaagttcgagactagcctggctaacatggcgaaaccctgcctctatttaaaatgccaaaaattggccaggcatggtggtgcacgcctataatcccagct-actcgggaggctaaggcaggagaatcgcttgaacccagaaggtggaggttgcagtgagccgagatcataccactgcactccagcctggcagcggac-agagc-agactctgtctgaaaaaaaaaaaa---------------------agagag i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73889867 285 + 74750902 ----------GGT-gctcacgcctgtaat-ccag-actttgggaggcagaggtgggcagatcacctgaagtgaggagttcaagaccagcgtggccaacacggtgaaaccccatctctattcaaaatgccaaaaattagccaggcatggtgctgtgcacctgtaatcccagct-actcgggaggctgagacaggagaatcgcttgaacgcagaaggcggaggttgcagtgaaccgagatcacgccactgcactcgcgcctggt---ggac-agagcaagactctgtttcaaaagaaagaaa--aaa---------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17323968 287 - 17725628 ----------ggtggctcacgcctgtaat-ccagaactttgggaggcagaggtgggcagatcacttgaagtcaggagttcaagaccagcctggccaacacggtgaaaccccatctctattcaaaatgccaaaaattagccaggcatggtgctgcatgcctgtaatcccagct-actcgggaggctaagacaggagaatcgcttgaacgcagaaggccgatgttgcagtgaaccgagatcacaccactgcactccagcctgct---ggac-agagcaagactctgtttcaaaagaaagaaa--aaa---------------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6417294 305 + 6778120 ggccgggcgcggtggctcaagcctgtaatcccagcactgtgggaggccgaggcgggtggatcac--gaggtcaagagatcgagaccatcctggtcaacatggtgaaaccccgtctgtactaaaactacaaaaaattagctgggcatggtggcacgtgcctgtaatcccagct-actcaggaggctgaggcaggagaattgcctgaacccgggaggcggatgttgcggtgagccgagatcgcgccattgcactccagcctggg---taacaagagcgaaactctgtctcaaaaaaaaaaaa--aaaa--------------aaaaaag i cebCap1.NW_016107444v1 I 5169 C 0 e proCoq1.NW_012133858v1 14814237 2749 - 22200726 I e mm10.chr16 32808675 1273 + 98207768 I e micMur3.chr1 88409902 2814 + 114275543 I e dasNov3.JH569502 2721191 2056 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e canFam3.chr33 2344673 1572 - 31377067 I e otoGar3.GL873829 233767 1316 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=77700.000000 s hg38.chr3_KI270934v1_alt 90821 32 + 163458 agagaAGT----TCTAGTAAATGCAACTGTATTCAC s panTro5.chr3 2563074 32 - 202621043 agagaaGT----TCTAGTAAATGCAACTGTATTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 151724 32 - 190779 agagaagt----tctagtaaatgcaactgtattcac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 105577 30 - 106623 agagaagt----t-tagtaaatgcaactgtattca- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2879706 32 - 123690457 agagaaGT----TCTAGTAAATGTAACTGTATTCAC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73890152 31 + 74750902 agagaaGT----TCTAGTAAATGCAATGTTATTC-C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17324255 36 - 17725628 agagaagttctatctagtaaatgcaaagtaattcac i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6417599 32 + 6778120 agagaagt----tctagtaaatgcaacgtaattcac i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 235083 32 + 608964 aaagaagt----tcaagtaaatgcagcttaattaat i otoGar3.GL873829 I 1316 C 0 s canFam3.chr33 2346245 31 - 31377067 aaagacat----tctagtaaatacaactttatcgt- i canFam3.chr33 I 1572 C 0 e proCoq1.NW_012133858v1 14814237 2749 - 22200726 I e mm10.chr16 32808675 1273 + 98207768 I e micMur3.chr1 88409902 2814 + 114275543 I e dasNov3.JH569502 2721191 2056 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=17745.000000 s hg38.chr3_KI270934v1_alt 90853 5 + 163458 CCTGT s panTro5.chr3 2563106 5 - 202621043 CCTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 151756 5 - 190779 cctgt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 105607 5 - 106623 cctgt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2879738 5 - 123690457 CCTGT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73890183 5 + 74750902 CCCGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17324291 5 - 17725628 cctgt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6417631 5 + 6778120 cctgt i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 235115 5 + 608964 ctcac i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32809948 5 + 98207768 CCTGC i mm10.chr16 I 1273 C 0 s canFam3.chr33 2346276 5 - 31377067 cccat i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 14814237 2749 - 22200726 I e micMur3.chr1 88409902 2814 + 114275543 I e dasNov3.JH569502 2721191 2056 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=550053.000000 s hg38.chr3_KI270934v1_alt 90858 177 + 163458 TGTATTTCCAGGGATGTTTG-AATAAACCCAGTAGACTGGTGCCTGGAAATTGCCCAGTGAGTCTGCCTGTTAATCTGGATCTGGGTTTATCACACCTACCTTCCCTCCTGTCCCGTCCACCCCAGCCACCCACAGT------GCCCAC-------------GCTGCC-TCTATCCGAGGGAGCATC-CTCTGGATACT s panTro5.chr3 2563111 177 - 202621043 TGTATTTCCAGGGATGTTTG-AATAAACCCAGTAGACTGGTGCCTGGAAATTGCCCAGTGAGTATGCCTGTTAATCTGGATCTGGGTTTATCACACCTACCTTCCCTCCTGTCCCGTCCACCCCAGCTACCCACAGT------GCCCAC-------------GCTGCC-TCTATCCGAGGGAGCATC-CTCTGGATACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 151761 177 - 190779 tgtatttccagggatgtttg-aataaacccagtagactggtgcctggaaattgcccagtgagtatgcctgttaatctggatctgGGTTTATCACACCTACCTTCCCTCCTGTCCCGTCCACCCCAGCTACCCACAGT------GCCCAC-------------GCTGCC-TCTATCCGAGGGAGCATC-CTCTGGATACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 105612 173 - 106623 tgtatttccagggatgtttg--ataaacccagtagactggtgcctggaaattg-ccagtgagtctgcctgttaatctggatctgGGTTTATCACACCTACCTTCCCTCCTGCCCCGTCCACCCCAGCCA-CCACAGT------GCCCAC-------------GCTGCC-TCTATCCGAGGGAGCAT--CTCTGGATACT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2879743 176 - 123690457 TGTATTTCCAGGGATGTTTT-AATAAACCCAATAGACTGGTGCCTGGAAATTGCCCAATGAGTCTGCCTATTAATCTGGATCTGGGTTTATCATGCCTACCTT-CCTCCTGTCCCATCCATCCCAGCCACCCGCAGT------GCCCAC-------------ACTGCC-TCTATCCGAGGGAGCTTC-CTCTGGATACT i nomLeu3.chr11 C 0 I 21 s calJac3.chr17 73890188 178 + 74750902 TGTATTTCCAGGGATGTTTT-AATAAACCCGGTGGACTGGTGCCTGGCTACTGCCCAGTGAATCTGCCTACTAATCTGGATCTGGGTTCTTCACACCTACCTTACCTCCTGTCCCGCCCACCCCAGCTGCCCACGGT------GCCCAT-------------GTTGCCCTCCATCTGAGGGAGCTTC-CTCTGGATGCT i calJac3.chr17 C 0 I 21 s saiBol1.JH378146 17324296 177 - 17725628 tgtatttccagggatgtttt-aataaaccccatgcactggtgcctggcaaccgcccagcgaatctgcctattaatctggAGCTGGGTTCTTCGCACCTGCCTT-CCTCCTGTCCCGCCCGCCCCAGCTGCCCACGGT------GCCCAT-------------GTTGCCCTCTATCTGAGGGAGCTTC-CTCTGGATGCT i saiBol1.JH378146 C 0 I 21 s cebCap1.NW_016107444v1 6417636 172 + 6778120 tgtatttccagggatgtttt-aataaacccgatggactggtgcctggcaaccgcccagtgaatctgcctattaatctggatctgGGTTCTTCATACCTACCTTCCCTCCTGTCCCGCCCACCCCAGCTGCCCACGGT------GCCCAT-------------GTTGCCATCTATCTGAGGGAGCTTC-CTCTG------ i cebCap1.NW_016107444v1 C 0 I 16 s otoGar3.GL873829 235120 159 + 608964 tgcattttcagggatgtttt-agtaaacctgatggattggagcctggcagttgcctagtgattttgcctgttaatctggatctgTCCTCATCA-ACTCCCCTTCCCACCTGTTCC-----CCCTTGCCCCCCACAGT------ACACAT--------------------TCTA-------GAGCCCCACTCTGGACACT i otoGar3.GL873829 C 0 I 21 s mm10.chr16 32809953 162 + 98207768 TGTACTTCCAGGTATATTTTTAGCCATCCTGATCAACTAGTGGGTGGCGGCTGATGGACCAGGCTG-CTGTTCATCTGGACCTGGGCTTTTTACGCTCACCATCCCTCCTAATCCCTCATGCCT--CCTCCAAAAGT------GTACAC--------------------ACCA-------GAACCAC-CTCTGAAGACT i mm10.chr16 C 0 I 3 s canFam3.chr33 2346281 164 - 31377067 cacatttcccgg-atattat-agcAAAACAAATGGGTT-GTGCCTGGCAGTCACCCCTTGAG------------TCTGGGTCTAGACTTGTCACAGC-ACCTTCCCTCCTGCCTC-----------CCCGCCTCAGT------GCACATTCTAGAACTCCCTGCTGCC-TCTACTGGCAGGAATCTC-TTTGGGACACT i canFam3.chr33 C 0 I 12 s dasNov3.JH569502 2723247 176 - 6579706 tgcatctccagggatgtttc-agcaagccgaatggactggtgcctggcagctgcccggtgagtctgcctattcatctggatctgGGCTCGTCACACTCACCTCTTCTCCTCTCCC-------CCCACAGCTCACAGTCCAGTGCCCCAT-------------GCTGCC-CCTACACACAGGAACCTC-CTCTGGACATT i dasNov3.JH569502 I 2056 I 18 e proCoq1.NW_012133858v1 14814237 2749 - 22200726 I e micMur3.chr1 88409902 2814 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=154122.000000 s hg38.chr3_KI270934v1_alt 91035 49 + 163458 ----AGACCCTCCCAAGCTGA---------TCATCCAAAGACATCT-TATCCAGATATAAAAC s panTro5.chr3 2563288 49 - 202621043 ----AGACCCTCCCAAGCTAA---------TCATCCAAAGACATCT-TATCCAGATATAAAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 151938 49 - 190779 ----AGACCCTCCCAAGCTAA---------TCATCCAAAGACATCT-TATCCAGATATAAAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 105785 47 - 106623 ----AGACCTCCC--AACTAA---------TCATCCAAAGACATCT-TATCCAGATATAAAAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2879940 49 - 123690457 ----AGACCCTCCCAAGCTAA---------TCACCCAAAGACATCT-TATCCATATATAAAAC i nomLeu3.chr11 I 21 C 0 s calJac3.chr17 73890387 47 + 74750902 ----AGGCCCTTCCAAGCTAA---------TGACCCAAAGACATCT-TA--CAGATATGAAGC i calJac3.chr17 I 21 C 0 s saiBol1.JH378146 17324494 47 - 17725628 ----AGGCCCTTCCAAGCTGA---------TGAGCCAAAGACATCT-CA--CAGATATGAAGC i saiBol1.JH378146 I 21 C 0 s cebCap1.NW_016107444v1 6417824 47 + 6778120 ----AGGCCCTTCCAAGCTAA---------TGACCCAAAGACATCT-TA--CAGATATGAAGC i cebCap1.NW_016107444v1 I 16 C 0 s proCoq1.NW_012133858v1 14816986 45 - 22200726 ----AGACCCTCCCAAGCTAA---------TCA--CCAAGACATCT-TA--TAGATCCAAAGG i proCoq1.NW_012133858v1 I 2749 C 0 s otoGar3.GL873829 235300 45 + 608964 ----AGACCCCCCCAAGCTCA---------TCA--CAAAGACATCT-TA--TATAGCCAAAGG i otoGar3.GL873829 I 21 C 0 s mm10.chr16 32810118 45 + 98207768 ----CAGCCTTCCCAAGCAGGCTCCAAGCTTGCTGCAGAGACAGCTGTG-------------- i mm10.chr16 I 3 C 0 s canFam3.chr33 2346457 47 - 31377067 ----CAACCTTCCCAAGCTAA---------TCAGCCAAGGACATCT-TA--GGAATATGAAGG i canFam3.chr33 I 12 I 4 s dasNov3.JH569502 2723441 51 - 6579706 AGCACCATCCTCCCCAGATGA---------TCATTCAAGAACATCT-TG--TAAATGTGAAGG i dasNov3.JH569502 I 18 C 0 e micMur3.chr1 88409902 2814 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=1292889.000000 s hg38.chr3_KI270934v1_alt 91084 290 + 163458 TGGATACACAAAGAAGCCACATCAACCATATAGTCGGTACTTAATAAGTGT-Ctgaatacatgaattatttgatta-atgaattaatgaatgCTGGGTCACAGGAGGTGG---GTCATGCCAGAGACAAAACAGATT--------AATTGATTGAATGAATG------A---GAGAGCAGAGATT-GGGGT-CTCTTTGACCTGTAGCACAG-ATGCCAGCCTA-G--CTCCTCACCTGTCTTC---------ACCCCAAGGCTCAG-CCACAGCAGGAGGAGGAGGACCAGCCACGTGGCAGCAGG-CATCAAGCAGAGATAGAAGTG s panTro5.chr3 2563337 286 - 202621043 TGGATACACAAAGAAGCCACATCAACCATATAGTCGGTACTTAATAAGTGT-CTGAATACACGaattatttgatta-atgaattaatgaatGCTGGGTCACAGGAGGTGG---GTCATGCCAGAGACAAAACAG------------ATTGATTGAATGAATG------A---GAGAGCAGAGACT-GGGGT-CTCTTTGACCTGTAGCACAG-ATGCCAGCCTA-G--CTCCTCACCTGTCTTC---------ACCCCAGGGCTCAG-CCACAGCAAGAGGAGGAGGACCAGCCACGTGGCAGCAGG-CATCAAGCAGAGATAGAAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 151987 286 - 190779 TGGATACACAAAGAAGCCACATCAACCATATAGTCGGTACTTAATAAGTGT-CTGAATACACGaattatttgatta-atgaattaatgaatGCTGGGTCACAGGAGGTGG---GTCATGCCAGAGACAAAACAG------------ATTGATTGAATGAATG------A---GAGAGCAGAGACT-GGGGT-CTCTTTGACCTGTAGCACAG-ATGCCAGCCTA-G--CTCCTCACCTGTCTTC---------ACCCCAGGGCTCAG-CCACAGCAAGAGGAGGAGGACCAGCCATGTGGCAGCAGG-CATCAAGCAGAGATAGAAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 105832 288 - 106623 TGGATACACAAAAAG--CACATCAAGCATATAGTC-GTACTTAATAAGTGTCCTGAATACACAAATTATTTGA-TA-ATGAATTAATGAATGCTAGGTCAC-GGAGGT-G---GTCATGCCAGAGACAAAACAGATT--------AATTGATTGAATGAATG------A---GAGAGCAGAGACT-GGGGT-CTCTTTGACCTGTAG-ACAGCAGATCAGCCTATG--CTCCTCACCTGTCTTC---------ACCCCAGGGCTCAGCCCACAGCAGGAGGAGGAGGACCAGCCACATGGCAGCAGGCCATCAAGCAGAGACAGAAGTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2879989 283 - 123690457 TGGATACACAAAGAAGCCACATCAGGCATATAGTTGGTACTTAATAAGTGT-CTGAATACataaattatttgatta-atgaattaatgaatGCTAGGTCACAGGAGGTGG---GTCATGCCAGAGACAAAACAG------------ATTGATTGAATGAATG------A---GAGAGCAGAGATT-GGGGT-CTCTTTGACCTGTAGCACAG-ATGCCAGCCTA-G--CTCCTCACCTGTCTTC---------ACCCCGGGGCTCAG-CCACAGCAGGAGGAGGAA---CAGCCACATGGCAGCAGG-CATCAAGCAGAGATAGAAGTG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73890434 263 + 74750902 TGGATACACAGAGAAGCCACATCAAGCATATAGTCAGTACTTAATAAGGGT-C-------------------------TGAATTAATGAATGCTAGACCACAGGAGGTGG---GTCGTGTCACAGACAAAAGAGATT--------AATTGATTGAATGACTG------A---GAGACCAGAGGTG-GAGGT-CTCCTTGACCTCTAGCACAG-AT--CAGCCTA-G--CTCCTCACCTGTCTTC---------ACCCCAGGGCTCAG-CCACAGCAGGAGGAGAAGCAGCAGCCACATGGCAGCAGG-CA-CGAGCGGAGAGAGCAGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17324541 287 - 17725628 TGGATACACAAAGAAGCCACATCGAGCATACAGTCGGTACCTCATAAGGGT-CTGAATACATGAATTATTTAATTA-ATGAATTAATGAATGCTAGACCACAGGAGGTAG---GTCTCGTCAGAGACAAAAGAGATT--------AATTGGTTGAATGACTG------A---GAGACCAGAGGTG-GGGGT-CTCCTTGACCTCTAGCACAG-AT--CAGCCTA-G--CTCCTTACCTGTCTTC---------ACCCCAGGGCTCAG-CCACAGCAGGAGGAGGAGCCCCAGCCACATGGCAGCAGG-CA-GGAGCAGAGACAGCAGTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6417871 283 + 6778120 TGGATACACAAAGAAGCCACATCAAGCATACAGTCGGTACTTAATAAGGGT-Ctgaatacatgaattatttgatta-atgaattaatgaatgCTAGACCACAGGAGGTGG---GTCTCGTCAGAGACAGAAGGG------------ATTGATTGAATGACTG------A---GAGACCAGAGGTG-GGGGT-CTCCTTGACCTCTAGCACAG-AT--CAGCCTA-G--CTCCTCACCTGTCTTC---------ACCCCAGGGCTCAG-CCACAGCAGGAGGAGAAGCCCCAGCCACATGACAGCAGG-CA-GGAGCGGAGACAGCAGTG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88412716 306 + 114275543 TGGACACACAGAGAAGCCACATTAAgcatatagtaggaacttagtaaatgt-ctgaataaatgaatTATTTGA-----TTAATTAATTAATGCTAGGTTACAGGAGGTAG---ATCATGTCAAAGACAAAAaaagat---tgactcattgaatgaatgaatgaatgaaa---gaGACCAGAGATC-AGGGT-CATTTTGATCTCTAGCACAG-ATGCTAGCCTA-G--CTCCTCACCTGTCCTCTGGTTTGGGGCCGTAGGGCTCAG-CCACAGCAGAAGAAGGAGGACCAGCCACATAGCTACAGG-CATCAAGCAGAGACGGAAGTA i micMur3.chr1 I 2814 C 0 s proCoq1.NW_012133858v1 14817031 299 - 22200726 TGGACACACAGAGAAGCCACATTACATATACAGTAGGAACTTAGTAAATGT-CTGaataaatgaattatttga-----ttaattaattaatGCTAGGCCACAAGAGGTAG---ATCATGTCAAAG---AAAAAAAAT---tg----attgaatgaatgaatgaataaaa---gaGACCAGAGATC-AGGGT-GATTTTGATCTCTAGCACAG-ATGCTAGCCTA-G--CTCCTCACCTGTCCTCTGGTTTGGGGCCATCGGGCTCAG-CCACAGCAGGAGAAGGAGGACCAGCCACATGGCTAGAGG-CACCAAGCAGAGACAGAAGTG i proCoq1.NW_012133858v1 C 0 I 64 s otoGar3.GL873829 235345 300 + 608964 TGCCTACACCAAGAAGCCACCTTAAgcataccgtaggtacttagcaaatgt-ctgaataaatgaatTATT--------TTGATTAATTAATACCAGGCCACAGAAGGTAG---ATCATGCCAAGGACAAAAGAgagtgagtgattgattgaatgaatgaatgaatgaaA---GAGACCAGAGATAGAGGGT-CCCTTTGTCATCTAGCATAG-CTGCTAGCCTG-G--CTCCTCACCTGTCTTTTGGTTTGGGGCCGCAGGGGTCAG-CCACAGCAGGAAAAGGAGCACCCGCCACAT-------GG-CACCATGCAGAGGTAGAAGTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32810163 299 + 98207768 TGGACACACCCAGAAGCCACACCAAGCACAT--TTAGGATACAAGTGATGT-CTGAGTAAGTGGGTTACCTGATCAGATCAGTGAGTGGGTTCTAGCCATCAGAAGGTGGCGTATCTGACCAGAAATAAATAAT------------ATTGATTGACTAAATG------AAATGAGAACAAACAC--AGGGT-CTCTTTGACCTCTCAAATAG-GGGTCAGCTCA-GTTCTCCTCACCTGCCTTCTGGTTTGGAATCACAGGGCCCAG-CCACAGCAGGAGGAGAAAGGCAAACCACATGGCTTCAGG-C--TCAATAGATGCAGAAGTG i mm10.chr16 C 0 C 0 s canFam3.chr33 2346508 268 - 31377067 TGGATTCACAGAGAAGCCACATTAAA------------GCACAGGAAGGTT-CCGAGGAAATGAATTATTGGATTA-ATGAATTAGTGAACATTAGCCCCTAGGAGGCAA---ATCATGCCAGGAACACAaatg------------actgaatgaataaatg------a---atgaaAGGGACTA-GAGGT-CTCTTTGACCTGCTAGACAG-------------G--CTCCTCACCTGTCTCCTGGTTTGGGGCCACGGGGCTCAA-CCACAGCAGGAGGAGAA---CCAGACACATGGTTGCAGG-CACTGAGCAGAGACAG-AGTG i canFam3.chr33 I 4 C 0 s dasNov3.JH569502 2723492 282 - 6579706 TGGACACACAGAGAAGCCACGTTAAGCATATAGTAGGGACTTAGTAAATAC-CTGAGTAAATGAATTATTCAATTA-ACAAATTAATGAATACAAGCCCTGAGGAG-------ATCCTACCAGGGACAGAAAAG------------AATGAGTGGA------------A---GAAACTAGAGGCC-GGGCTCCCCTTTGACCTCTAGTGCAG-GGGCTAGCGTG-G--CTCCTCACCTGTCCTACGAATCAGGGCGGCAGGGCTCAG-CCACAGCAGGAGGAGAA---CCAGCCACATGGCTGCAGA-CA-CAAGCAGAGACAGAAGTG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=153552.000000 s hg38.chr3_KI270934v1_alt 91374 44 + 163458 CTGCAGCGTCCAAGGCCTGGTC-TTTAAATATCCACCCATCCCAG s panTro5.chr3 2563623 44 - 202621043 CTGCGGCGTCCAAGGCCTGGTC-TTTAAATATCCACCCATCCCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 152273 44 - 190779 CTGCGGTGTCCAAGGCCTGGTC-TTTAAATATCCACCCATCCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 106120 44 - 106623 CTGCGGC-TCCAAGGCCTGGTCTTTTAAATATCCACCCATCCCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2880272 44 - 123690457 CTGCAGTGTTCAAGGCCTGGTC-TTTAAATATCCACCTATCCCAG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73890697 43 + 74750902 TTTT-GGGTCCAAGGCCCAGTC-TTTAAATATCTGCCCATCCCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17324828 44 - 17725628 TTGCAGGGTCCAAGGCCCAGTC-TTTAAATATCCGCCCATCCCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6418154 44 + 6778120 TTGCAGGGCCCAAGACCCAGTC-TTTAAATATCCGCCCATCCCAG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88413022 44 + 114275543 TTTCAGGGACCAGGGCCTGAGT-TTTTAATATCCACCCATCTCAG i micMur3.chr1 C 0 I 24 s otoGar3.GL873829 235645 37 + 608964 TTTCAGGAGCCAAGGTCTGGG--TTTTAATATCTGCATA------ i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32810462 42 + 98207768 CTTCAGGGATCAAGGTCCAG---CTCCAATAGCTACTCACTGGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2346776 43 - 31377067 TTTCAAGGACCAAGGCCAAGTC-TTT-AATACTCACCCATCCCAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2723774 43 - 6579706 TTTCAGGGACCAAAGCCCAGGC-TTCTAATA-CCAACCAACCCAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14817330 64 - 22200726 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=56837.000000 s hg38.chr3_KI270934v1_alt 91418 22 + 163458 CCAGCCCACCTGGTTCCTCCCT s panTro5.chr3 2563667 22 - 202621043 CCAGCCCACCTGGTTCCTCCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 152317 22 - 190779 CCAGCCCACCTGGTTCCTCCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 106164 22 - 106623 CCAGCCCACCTGGTTCCTCCCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2880316 22 - 123690457 CCAGCCCACCTGGTTCCTCCCT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73890740 22 + 74750902 CCAACCCATCTGGTTCCTCCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17324872 22 - 17725628 CCAACCCACCTGGTTCCTCCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6418198 22 + 6778120 CCAACCCACCTGGTTCCTCCCC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 235682 16 + 608964 ----CTCACTTGGCATTTGC-- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32810504 22 + 98207768 AGCACTTGTCCAGTGTCTCCAC i mm10.chr16 C 0 C 0 s canFam3.chr33 2346819 20 - 31377067 GAAGCTCGTTTGGTATCTGC-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2723817 20 - 6579706 CCAGCTCACCTGGCATTCGT-- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 14817330 64 - 22200726 I e micMur3.chr1 88413066 24 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=1220.000000 s hg38.chr3_KI270934v1_alt 91440 4 + 163458 ACTC s panTro5.chr3 2563689 4 - 202621043 ACTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 152339 4 - 190779 ACTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 106186 4 - 106623 ACTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2880338 4 - 123690457 GCTC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73890762 4 + 74750902 AGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17324894 4 - 17725628 AGCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6418220 4 + 6778120 AGCT i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 14817394 4 - 22200726 ACTT i proCoq1.NW_012133858v1 I 64 C 0 s otoGar3.GL873829 235698 4 + 608964 ACTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32810526 3 + 98207768 ACA- i mm10.chr16 C 0 C 0 s canFam3.chr33 2346839 4 - 31377067 ATCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2723837 4 - 6579706 ACCG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 88413066 24 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=151506.000000 s hg38.chr3_KI270934v1_alt 91444 26 + 163458 CTGGGGAGGAACCAG--CAGACACCTGG s panTro5.chr3 2563693 26 - 202621043 CTGGGGAGGAACCAG--CAGACACCTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 152343 26 - 190779 CTGGGGAGGAACCAG--CAGACACCTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 106190 26 - 106623 CTGGGGAGGAACCAG--CGGACACTGGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2880342 26 - 123690457 CTGGGGAGGAACCAG--CGGACACCTGG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73890766 23 + 74750902 ---GGGAGGAACCAG--CTAACACCTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17324898 24 - 17725628 --GGGGAGGAACCAG--CTAACACCTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6418224 23 + 6778120 ---GGTGGGAACCAG--CTAACACCTGG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88413090 26 + 114275543 CTGGGGAGGAACCAG--CTGACACCTGG i micMur3.chr1 I 24 I 24 s proCoq1.NW_012133858v1 14817398 26 - 22200726 CTGGGGAGGAACCAG--CTGACACCTGG i proCoq1.NW_012133858v1 C 0 N 0 s otoGar3.GL873829 235702 25 + 608964 CTGGGGAAGAACCAG--CTGACACCTG- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 32810529 24 + 98207768 --GAGGAGGAGCCAG--GTGACACCTGG i mm10.chr16 C 0 C 0 s canFam3.chr33 2346843 28 - 31377067 CTGGGGAGGTGCGAAGCTCAACACCTGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2723841 26 - 6579706 CTGGGGAGGAGCCAG--CTGACTCCTGA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=54492.000000 s hg38.chr3_KI270934v1_alt 91470 23 + 163458 GCAGTCACTGGCA-------GA-CAGCAGGA s panTro5.chr3 2563719 23 - 202621043 GCAGTCACTGGCA-------GA-CAGCAGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 152369 23 - 190779 GCAGTCACTGGCA-------GA-CAGCAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 106216 24 - 106623 CCATGCACTGGCA-------GACCAGCAGGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2880368 23 - 123690457 GCAGTCACTGGCA-------GA-CAGCAGGA i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73890789 19 + 74750902 GCAGTCGCT-----------GA-CAGCAGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17324922 19 - 17725628 GCAGTCACT-----------GA-CAGCAGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6418247 18 + 6778120 GCAGTCACT-----------GA-CAGGAGG- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 235727 23 + 608964 GTAGTCACTGGCA-------GA-GGGCATGG i otoGar3.GL873829 C 0 I 2 s mm10.chr16 32810553 26 + 98207768 ----TGATTGGCAAGGGGGTGG-CACCGTGG i mm10.chr16 C 0 I 4 s canFam3.chr33 2346871 23 - 31377067 GCAGCCACTGGCA-------GA-AGGCAGGG i canFam3.chr33 C 0 I 16 s dasNov3.JH569502 2723867 23 - 6579706 GCAGGCATTGGTA-------GA-GGGCAAGG i dasNov3.JH569502 C 0 I 2 e micMur3.chr1 88413116 24 + 114275543 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=263934.000000 s hg38.chr3_KI270934v1_alt 91493 59 + 163458 GTG-ACAC--AGGTATCCCAGCTGCTTGAAA---------TAGCTCACCCAAGCAGAGGTAA--------------------------TTTTGACAT s panTro5.chr3 2563742 59 - 202621043 GTG-ACAC--AGGTATCCCAGCTGCTTGAAA---------TAGCTCACCCAAGCAGAGGTAA--------------------------TTTTGACAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 152392 59 - 190779 GTG-ACAC--AGGTATCCCAGCTGCTTGAAA---------TAGCTCACCCAAGCAGAGGTAA--------------------------TTTTGACAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 106240 60 - 106623 GTGAACAC--AGGTATCCCAGCTGCTTGAAA---------TAGCTCACCCAAGCAGAGGTAA--------------------------TTTTCACAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2880391 59 - 123690457 GTG-ACAC--AGGTATCCCAGCTGCTTGGAA---------TAGCTCACCCAAGCAGAGGTTA--------------------------TTTTCACAT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73890808 59 + 74750902 GTG-ACGC--AGGTATCCCAGCTGCTTGGAA---------TAGCTCACTTAAGCAGGGATAA--------------------------TTTTCACGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17324941 59 - 17725628 GTG-ATGC--AGGTGTCCCAGCTGCTTGGAA---------TAGCTCAGTTAAGCAGGGATGA--------------------------TTTTCACGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6418265 57 + 6778120 --G-ACGC--AGGTGTCCCAGCTACTTGGAA---------TAGCTCACTTAAGCAGGGATAA--------------------------TTTTCACGT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 88413140 54 + 114275543 GTG-GCAC--AGGTGTCCCAGCTGCT--------------TAGATCACCCAAGCAGAGGTAA--------------------------TTTTCACAT i micMur3.chr1 I 24 N 0 s otoGar3.GL873829 235752 58 + 608964 GTG-GCAC--AGGTGTCCCAGTTGCCTGGAG---------TAGATCATCCAAG-AGAGGTAA--------------------------TTTTCTCAT i otoGar3.GL873829 I 2 I 2 s mm10.chr16 32810583 59 + 98207768 GTG-GCAC--AGGTGTTTCAGCTGCTGGGAT---------TGACTTAGCCAAACAGAGGTAA--------------------------TTTTTATAT i mm10.chr16 I 4 C 0 s canFam3.chr33 2346910 85 - 31377067 GTG-GCAC--AGGTGTCCCGGCTGCTTGGAA---------TAGCCTGTCCAAGCAGAGGTAATAGAGGaaaaaaatatatatatatattttCCCCAT i canFam3.chr33 I 16 I 2 s dasNov3.JH569502 2723892 65 - 6579706 GTG-GCACCAAGG-----CAGCTGCTTGGAATCAGCTGCTTGGCTCACCCAAGCAAAGGTAA--------------------------GTTTAGGGG i dasNov3.JH569502 I 2 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=144134.000000 s hg38.chr3_KI270934v1_alt 91552 51 + 163458 -CCTGGAAACTCCAGCCTCCA-GGGGA----AGAATCTGAAAAACCAGAGTGACAAA s panTro5.chr3 2563801 51 - 202621043 -CCTGGAAACTCCAGCCTCCA-GGGGA----AGAATCTGAAAAACCAGAGTGACAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 152451 51 - 190779 -CCTGGAAACTCCAGCCTCCA-GGGGA----AGAATCTGAAAAACCagagtgacaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 106300 51 - 106623 -CCTGGAAACTCCAGTCTCCAGGGGGA----AGAATCTGAAAAACCAGAGTGAC-AA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2880450 51 - 123690457 -CCTGGAAACTCCAGTCTCCA-GGGGA----AGAATCTGAAAAACCagagtgacaaa i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73890867 51 + 74750902 -CCTGGAAACTCCAGTCTCCC-GGGGA----AGAATCTGAAAAATCAGAGTGACAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17325000 51 - 17725628 -CTGGGAAACTCCAGTCTCCC-AGCGA----AGAATCTGAAAAATCAGCGTGAGAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6418322 51 + 6778120 -CTTGGAAACTCCAGTCTCCC-AGGGA----AGAATCTGAAAAATCAGAGTGACAGG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 235812 44 + 608964 -CCTGGGGACTCTGGGATCCA-AGGGA----Agaatcagaaaaa-------aacaga i otoGar3.GL873829 I 2 C 0 s mm10.chr16 32810642 49 + 98207768 -CTTTTTATACCCACGCTC---TGGGA----agaatctgaaatgccaaagtggcaga i mm10.chr16 C 0 N 0 s canFam3.chr33 2346997 49 - 31377067 -CCTGGGGCTTCCAGACCT---GTGGG----AGGAGCAGAGAAGCTAgaatcagaga i canFam3.chr33 I 2 I 7 s dasNov3.JH569502 2723957 48 - 6579706 CGTGGGGAATTCTAGCAGTGT-GGGAAGGACAgaatcaggaaaaccaga-------- i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=116354.000000 s hg38.chr3_KI270934v1_alt 91603 39 + 163458 ATGACAGCGCTCACAGGAACTTTGCAGATTATCTAATCt s panTro5.chr3 2563852 39 - 202621043 ATGACAGCGCTCACAGGAACTTTGCAGATTATCTAATCt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 152502 39 - 190779 atgacagcgctcacaggaactttgcagattatctaatct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 106351 39 - 106623 ATGACAGAGCTCACAGGAACTTTGCAGATTATCTAATCt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2880501 39 - 123690457 atgacagagcttgcaggaactttgcagattatctaatct i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73890918 32 + 74750902 GCCACGTAGCTCA-AGGAACTTTGGAGATTATC------ i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17325051 39 - 17725628 GCCACGGAGCTCACAGGAACTTTGGAGATTATCTAAttt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6418373 39 + 6778120 GCCACAGAGCTCACAGGAACTTTGGAGATTATCTAAttt i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 235856 39 + 608964 gcaacagaactgacagggaccttggacattatctagtct i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2347053 39 - 31377067 atgatactgctgtcagggattttggtgatcatccaatct i canFam3.chr33 I 7 N 0 s dasNov3.JH569502 2724005 39 - 6579706 ataacagaggtggcaggaaccttggagcacatctagtct i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=-11689.000000 s hg38.chr3_KI270934v1_alt 91642 15 + 163458 ttttatt--------tattttat s panTro5.chr3 2563891 15 - 202621043 ttttatt--------tattttat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 152541 10 - 190779 tttta-------------tttat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 106390 15 - 106623 ttttatt--------tattttat i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2880540 17 - 123690457 ttttattta------tattttat i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73890950 4 + 74750902 -------------------tttt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17325090 14 - 17725628 tttt-tt--------tttttttt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6418412 6 + 6778120 tt-----------------tttt i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 235895 11 + 608964 gatcttc------------ccat i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2724044 16 - 6579706 -------gaatgttccattttat i dasNov3.JH569502 C 0 I 11544 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=12528.000000 s hg38.chr3_KI270934v1_alt 91657 5 + 163458 tttat s panTro5.chr3 2563906 5 - 202621043 tttat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 152551 5 - 190779 tttat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 106405 5 - 106623 tttat i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2880557 5 - 123690457 tttat i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73890954 5 + 74750902 ttttt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17325104 5 - 17725628 ttttt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6418418 5 + 6778120 ttttt i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 235906 5 + 608964 tttat i otoGar3.GL873829 C 0 I 219 e dasNov3.JH569502 2724060 11544 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=290015.000000 s hg38.chr3_KI270934v1_alt 91662 130 + 163458 tttttgagacagagtctcactctatcgcccag-gctggagtgcagtggtacgatctc-agctcactgcaacctctgcctcccgggttcaagaggttcttctgcttcag--cctccccagtagctgggattacag s panTro5.chr3 2563911 130 - 202621043 tttttgagacagagtctcactctatcgcccag-gctggagtgcagtggtatgatctc-agctcactgcaacctctgcctcctgggttcaagaggttcttctgcttcag--cctccccagtggctgggattacag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 152556 130 - 190779 tttttgagacagagtctcactctatcgcccag-gctggagtgcagtggtatgatctc-agctcactgcaacctctgcctcctgggttcaagaggttcttctgcttcag--cctccccagtagctgggattacag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 106410 133 - 106623 tttttgagacagagtctcactctatcgccaggcgctggagtgcagtggtacgatctcaagctcactgcaa-ctctgcctcccgggttcaagaggttcttctgcttcaagcctcccccagtagctgggattacag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2880562 130 - 123690457 tttttgagacagagtctcactctatcgcccag-gctggagtgcagtggtatgatctc-agctcactgcaacctctgcctcctgggttcaagagattctcctgcctcag--cctcaccagtagctgggattacag i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73890959 130 + 74750902 tttttgagacagagtcttgctctgtcacccag-gctggaatgcagtggtatgatctc-agctcactgcaacctctgccttctgggttcaagggattgtcctgcctcag--cctccccagtagctgggattacag i calJac3.chr17 C 0 I 3886 s saiBol1.JH378146 17325109 130 - 17725628 tttttgagacagagtcttgctctgtcacccag-gctggaatgcagtggtatgatctc-agctcactgcaacctctgccttctgggctcaagggattgtcatgcctcag--gcttcccagtagctgggattacag i saiBol1.JH378146 C 0 I 1518 s cebCap1.NW_016107444v1 6418423 130 + 6778120 tttttgagacagagtcttgcgctgtcaaccag-gctggaaagcagtggtacgatctc-agctcactgcaacctctgccttctgggttcgagggatcatcctgcctcag--gctccccagtagctgggattacag i cebCap1.NW_016107444v1 C 0 I 4012 e dasNov3.JH569502 2724060 11544 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e otoGar3.GL873829 235911 219 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=66660.000000 s hg38.chr3_KI270934v1_alt 91792 81 + 163458 gtggctactattacacccagctaattgctgtatttttagtagagacgagttttcaccacgttggccaggctggtctcaaac s panTro5.chr3 2564041 81 - 202621043 gtggctactattacacccagctaattgctgtatttttagtagagacgagttttcaccatgttggccaggctggtctcaaac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 152686 81 - 190779 gtggctactattacacccagctaattgctgtatttttagtagagacgagttttcaccatgttggccaggctggtctcaaac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 106543 80 - 106623 gtgcctacaattacatccagctaattgctgt-cttttagtagagacgagttttcaccatgttggccaggctggtctcaaac i gorGor5.CYUI01000576v1 C 0 T 68585 s nomLeu3.chr11 2880692 81 - 123690457 gcacctactactacacccagctaattgctgtatttttagtagagatgggttttcaccgtgttgaccaggctggtcccagac i nomLeu3.chr11 C 0 C 0 e dasNov3.JH569502 2724060 11544 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17325239 1518 - 17725628 I e calJac3.chr17 73891089 3886 + 74750902 I e cebCap1.NW_016107444v1 6418553 4012 + 6778120 I e otoGar3.GL873829 235911 219 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=146165.000000 s hg38.chr3_KI270934v1_alt 91873 161 + 163458 tcctgacctcaggtgatccactgcctcagcctcccaaagtgctgggattacaggcatgagccaccacacctggccAATTGACTTTtattagcattcatatacaggttttgtgtgaatatatgttttcatttctccgggataaatgtgcaaaaatgaaatta s panTro5.chr3 2564122 161 - 202621043 tcctgacctcaggtgatccactgcctcagcctcccaaagtgctgggattacaggcatgagccaccacgcctggccAATTGActtttattagcattcatatacaggttttgtgtgaatatatgttttcatttctccgggataaatgtgcaaaaatgaaatta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 152767 161 - 190779 tcctgacctcaggtgatccactgcctcagcctcccaaagtgctgggattacaggcatgagccaccacgcctggccAATTGACTTTtattagcattcacatacaggttttgtgtgaatatatgttttcatttctccgggataaatgtgcaaaaatgaaatta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 38038 161 - 106623 tcctgacctcaggtgatccactgcctcagcctcccaaagtgctgggattacaggcatgagccaccacgcctggccAATTGACTTTtattagcattcatatacaggttttgtgtgaatatatgttttcatttctccgggataaatgtgcaaaaatgaaatta i gorGor5.CYUI01000576v1 T 68585 C 0 s nomLeu3.chr11 2880773 161 - 123690457 tcctgacctcaagtgatccacagcctcagcctctcaaagtgctgggattacaggcatgagccaccacacctggccAATTaacttttattagcattcatatacaggttttgtgggaatatatgttttcatttccttgggataaacgtgcaaaaatgaaatta i nomLeu3.chr11 C 0 C 0 e dasNov3.JH569502 2724060 11544 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17325239 1518 - 17725628 I e calJac3.chr17 73891089 3886 + 74750902 I e cebCap1.NW_016107444v1 6418553 4012 + 6778120 I e otoGar3.GL873829 235911 219 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=455306.000000 s hg38.chr3_KI270934v1_alt 92034 478 + 163458 ctgcatcatatagtagttgcacattcagtcataaaaaaaaacagccaagctgtttcccagagtggct-gcaccactttaaattctcacagcagtgattgagtggtacagttcctttgcatccttgac----aatagtattgttactattttttattttggtgattcttttttttttttttttttttgagacataatcttgctctgtcgcccaggctggagcgcagtggcatgatctcagcttactgcaacctccgtctcctgggtttaagcaattatcttgcctcagcctcccaaggtgctaggactacaggcgtgtgccaccacacctggctaatttttgtgttttcagcagagacagggttttgccatgttggccaggttggtcttgaattcctgatctcatgtgatctgcctgccccagcctcccaaagtgttgggattacaggtgtgagccaccatgcctggcc--------ttattttgttgattc s panTro5.chr3 2564283 469 - 202621043 ctgcatcatatagtagttgcacgttcagtcat-aaaaaaaacagccaagctgtttcccagagtggct-gcaccactttaaattctcacagcagtgattgagtggtacagttcctttgcatccttgac----aatagtattgttactattttttattgtggtgattc--------ttttttttttttgagacataatcttgctctgtcgcccaggctggagcacagtggcatgatctcagcttactgcaacctccgtctcctgggtttaagcaattatcttgcctcagcctcccaaggtgctaggactacaggcgtgtgccaccacacctggctaatttttgtgttttcagcagagacagggttttgccatgttggccaggttggtcttgaactcctgatctcatgtgatctgcctgccccagcctcccaaagtgttgggattacaggtgtgagccaccgtgcctggcc--------ttattttgttgattc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 152928 471 - 190779 ctgcatcatatagtagttgcacgttcagtcat-aaaaaaaacagccaagctgtttcccagagtggct-gcaccactttaaattctcacagcagtgattgagtggtacagttcctttgcatccttgac----aatagtattgttactattttttattgtggtgattc------ttttttttttttttgagacataatcttgctctgtcgcccaggctggagcgcagtggcatgatctcagcttactgcaacctccgtctcctgggtttaagcaattatcttgcctcagcctcccaaggtgctaggactacaggcgtgtgccaccacacctggctaatttttgtgttttcagcagagacagggttttgccatgttggctaggttggtcttgaactcctgatctcatgtgatctgcctgccccagcctcccaaagtgttgggattacaggtgtgagccaccgtgcctggcc--------ttattttgttgattc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 38199 473 - 106623 ctgcatcatatagtagttgcacgttcagtcataaaaaaaaactgccaagctgtttcccagagtggctggcaccactttaaattctcacagcagtgattgagtggtacagttcctttgcatccttgac----aatagtattgttactattttttattttggtgattc------ttttttttttttttgagacataatcttgctctgtcgcccaggctggagcgcagtggcatgatctcagcttactgcaacctccgtctcctgggtttaagcaattatcttgcctcagcctcccaaggtgctaggactacaggcatgtgccaccacacctggctaatttttgtgttttcagcagagacagggttttgccatgttggccaggttggtcttgaactcctgatctcatgtgatctgcctgccccagcctcccaaagtgttgggattacaggtgtgagccaccgtgcctggcc--------ttattttgttgattc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2880934 465 - 123690457 ctgcatcatatagtagttgcatcttcagtcattaaaaaaaactgccaaactgtttcccagagtggct-gcaccactgtaaattctcacagcagtgactgaatggtacagttcctttgcatccttgcc----aacagtattgttactattttttattttggtgattc-------------cttttttgagaaataatcttgctctgttgcccaggctggagtgcagtggcacgatctcagctcactgcaacctctgtctcctgggtttaagcaattctcctgcctcagcctctcaaggtgctaggactacaggcatgtgccaccacgcctggctaatttttgtgtttttagcagagatagggttttgccatgttggccaggctggtcttgaactcctgatctcatgtgatctgcctgccccagcctcccaaagtgttgggattacagacatgagccaccgtgcccggcc--------ttattttgttgattc i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 236130 403 + 608964 CTACACCACATGGCTGTTGAA-ATGCTGACAGAACAAGAGAGGGGTGAG----------GGGTAGAT-AT-CTacct--acttctcac-----------------ctaactctaccccctccttaacctctgacaacctctaaactgttctccacttctataattt--------------ttttttgagacagaatcttgct---ttgccaagattggta-----------gat---agctcacagcaacctcacattcttgggctcaagtgatcctcttgcctcagcctcctgtaac-ctgggactaca----------acaacgcccagctattttt------------agagacaaggtctcac--tcttactcagactggtctccaacttctgagcttaggcaatccacccacctcagtctcccagagtgctaagattacatgtgtgagccagggtgcccagcccactgctataattttgtcatttc i otoGar3.GL873829 I 219 I 2904 e dasNov3.JH569502 2724060 11544 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17325239 1518 - 17725628 I e calJac3.chr17 73891089 3886 + 74750902 I e cebCap1.NW_016107444v1 6418553 4012 + 6778120 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=389809.000000 s hg38.chr3_KI270934v1_alt 92512 495 + 163458 taacacgtggtgatatctcctggtttaaagaagcgtttccctaatggtatcaaacatcttttcatgtgcttatttgcaatctgtatatcttctccagtgaaatgttgctttgtatcttttgctcatgttctaattgcattctttgttttgttactattttaagacttttaaatgtattctagatactagTCCTTTGC--------------AAATATagtcatgcatcgcataaggacattttggtcaatgacaaactgcatataggatgcggtcccataagattataataatgggcctgaaaaaattcctgttgccgagtgcaatgctactcatgtgtctagtgatgctcgtgtaaagctactgtgctgccacttgcataaaagcacagcgcacaccattctgtacagtacacaatacttgataatgataataaatgtgttcctggatagcacagcacacaccattctgtacaatacacaatacgtgataatgataataaatgtgttc s panTro5.chr3 2564752 494 - 202621043 taacacgtggtgatatttcctggtttaaagaagcgtttccctaatggtatcaaacatcttttcatgtgcttatttgcaatctatatatcttttccagtgaaatgttgctttgtatcttttgctcatgttctaattgcattctttgttttgttactattttaagacttttaaatgtattctagatactagTCCTTTGC--------------AAATATagtcatgcattgcataaggacattttggtcaatgacaaactgcatataggatggggtcccataagattataataatgggcctg-aaaaattcctgttgccgagtgcaatgctactcatatgtctagtgatgctcgtgtaaagctactgtgctgccacttgcataaaagcacagcgcacaccattctgtacagtacacaatacttgataatgataataaatgtgttactggATagcacagcgcacaccattctgtacagcacacaatacttgataatgataataaatgtgttc i panTro5.chr3 C 0 I 723 s panPan2.chrUn_NW_014024201v1 153399 494 - 190779 taacacgtggtgatatttcctggtttaaagaagcatttccctaatggtatcaaacatcttttcatgtgcttatttgcaatctatatatcttttccagtgaaatgttgctttgtatcttttgctcatgttctaattgcattctttgttttgttactattttaagacttttaaatgtattctagatactagTCCTTTGC--------------AAATATagtcatgcattgcataaggacattttggtcaatgacaaactgcatataggatggggtcccataagattataataatgggcctg-aaaaattcctgttgccgagtgcaatgctactcatatgtctagtgatgctcgtgtaaagctactgtgctgccacttgcataaaagcacagtgcacaccattctgtacagtacacaatacttgataatgataataaatgtgttattggATagcacagcgcacaccattctgtacagcacacaatacttgataatgataataaatgtgttc i panPan2.chrUn_NW_014024201v1 C 0 I 189 s gorGor5.CYUI01000576v1 38672 493 - 106623 taacacgtggtgatatctcctggtttaaagaagcgtttccctaatggtatcaaacatcttttcatgtgcttatttgcaatctgtatatcttttccagtgaaatgttgctttgtatcttttgctcatgttctaattgcattctttgttttgttactattttaagacttttaaatgtattctagatactagTCCTTTGC--------------AAATATagtcatgcattgcataaggacattttggtcaatgacaaactgcatataggatggggtcccataagattataataatgggcctg-aagaattcctgttgcccagtgcaatgctactcatgtggctagcgatgctcgtgtaaagctactgtgctgccacttgcataaaagcacag-gcacaccattctgtacagtacacagtacttgataatgataataaatgtgttcctggATagcacagcgcacaccattctgtacagtacacagtacttgataatgataataaatgtgttc i gorGor5.CYUI01000576v1 C 0 I 63 s nomLeu3.chr11 2881399 432 - 123690457 taacacatggtgggatctcctggtttaaaggggcatttccctaatggtatcaaacatcttttcatgtgcttatttgcaatctgtgtaacttttccagtgaaatgttgctttgtatcttttgctcatgttctaattggattctttgttttgttactg-tttaagacttttaaatgtattctagatactagtcctttgctggatgtgtggtttgcaaatagtcatgcgttgcataaggacatttgggtcaatgacacactgtatataggatggggtcccataagattatagtaaggggcctg-aaaaattcctgttgccgagtgcaatgctactcatgtgtctagtgatgctcatgtaaagctactgtgctgccacttgcataaaagcacagcacacaccattctgtacagcacataatacttgataataatgtta--------------------------------------------------------------------------- i nomLeu3.chr11 C 0 C 0 e dasNov3.JH569502 2724060 11544 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17325239 1518 - 17725628 I e calJac3.chr17 73891089 3886 + 74750902 I e cebCap1.NW_016107444v1 6418553 4012 + 6778120 I e otoGar3.GL873829 236533 2904 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=329727.000000 s hg38.chr3_KI270934v1_alt 93007 369 + 163458 ctggtttatgtatttactataatatactattgatcagtgttttagagtgtactccttctctctataaaagaattaagtgaactagcaggccctttgggaagtactgtagaaggcattgttaccacaggcgatgacagctccatgtgtgttattgcccctgaagaccttccagagagacaaaatgtggaggtggaagacagtgatactgatgaccctgaccctgtgtggatctaggctaacatgtgtttttgtgtcttagttttcaacaaaaaagtttaaaaagttaaaatactaagtttataaagttaaaaagttacagtaagctaaggctgacttattgaaaaaatgtgcttatacatgtaatatagc s panTro5.chr3 2565969 369 - 202621043 ctggtttatgtatttactatactgtactattgatcagtgttttagagtgtactccttctaactataaaagaattaagtgaactagcaggccctttgggaagtactgtagaaggcattgttaccacaggcgatgacagctccatgtgtgttattgcccctgaagaccttccagagagacaaaatgtggaggtggaagacagtgatactgatgaccctgaccctgtgtggatctaggctaacatgtgtttttgtgtcttagttttcaacaaaaaagtttaaaaagttaaaatactaagtttataaagttaaaaaGTTACAGTAAGCTAAGGCTGACTTATTGAAAAAATGTGCTTATACATGTAATATAGC i panTro5.chr3 I 723 C 0 s panPan2.chrUn_NW_014024201v1 154082 369 - 190779 ctggtttatgtatttactatactgtactattgatcagtgttttagagtgtactccttctaactataaaagaattaagtgaactagcaggccctttgggaagtactgtagaaggcattgttaccacaggcgatgacagctccatgtgtgttattgcccctgaagaccttccagagagacaaaatgtggaggtggaagacagtgatactgatgaccctgaccctgtgtggatctaggctaacatgtgtttttgtgtcttagttttcaacaaaaaagtttaaaaagttaaaatactaagtttataaagttaaaaagttacagtaagctaaggctgacttattgaaaaaatgtgcttatacatgtaatatagc i panPan2.chrUn_NW_014024201v1 I 189 C 0 s gorGor5.CYUI01000576v1 39228 363 - 106623 ctggtttatgtatttactatactatactattgatcagtgttttagagtgtactccttctaactataaaagaattaagtgaactagcaggccctttgggaagtactgtagaaggcattgttaccacaggcgatgacagctccatgtgtgttattgcccctgaagaccttccagagagacaaaatgtggaggtggaagacagtgatactgatgaccctgaccctgtgtggatctaggctaacatgtgtttttgtgtcttagctttcaacaaaaaagtttaaaaagttaaaatacaaagttta------taaaaagttacagtaagctaaggctaacttattgaaaaaaTGTGCTTATACATGTAATATAGC i gorGor5.CYUI01000576v1 I 63 C 0 s nomLeu3.chr11 2881831 367 - 123690457 ctggtttaagtatttactatactgtactattgaccagtgttttagagtgtactccttctatctataaaagaattaagtgaactaacaggccctttgggaagtactgtagaaggcactgttaccacaggcgatgacagctccatgtgtgttactgctcctgaagaccttccagagagacaaaatgtggaggtggaagacagtgatactgatgaccctgaccctgtgtagatctaggctaac--gtgcttttgtgtcttagttttcaacaaaaaagtttaaaaagttaaaatactaagtttataaagttaaaaagttacagtaagctaaggttgacttattgaaaaaaTGTGCTTATACATGTAATACAGC i nomLeu3.chr11 C 0 C 0 e dasNov3.JH569502 2724060 11544 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17325239 1518 - 17725628 I e calJac3.chr17 73891089 3886 + 74750902 I e cebCap1.NW_016107444v1 6418553 4012 + 6778120 I e otoGar3.GL873829 236533 2904 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=13022.000000 s hg38.chr3_KI270934v1_alt 93376 13 + 163458 taagCTGGCTTTT s panTro5.chr3 2566338 13 - 202621043 TAAGTTGGCTTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 154451 13 - 190779 taagtTGGCTTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 39591 13 - 106623 TATGTTGGCTTTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2882198 13 - 123690457 TAAGTCTGCTTTT i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 239437 13 + 608964 TATGTTTGCTTCT i otoGar3.GL873829 I 2904 C 0 e dasNov3.JH569502 2724060 11544 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17325239 1518 - 17725628 I e calJac3.chr17 73891089 3886 + 74750902 I e cebCap1.NW_016107444v1 6418553 4012 + 6778120 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=116321.000000 s hg38.chr3_KI270934v1_alt 93389 65 + 163458 GCAAACATAGAGTCCTGTGGATGTT---ATGCTGACTTCGGCTTGGGGTTTTTCACAGAG-AGAAGCAT s panTro5.chr3 2566351 65 - 202621043 GCAAACATAGAGTCCTGTGGATGTT---ATGCTGACTTCGGCTTGGGGTTTTTCACAGAG-AGAAACAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 154464 65 - 190779 GCAAACATAGAGTCCTGTGGATGTT---ATGCTGACTTCGGCTTGGGGTTTTTCACAGAG-AGAAACAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 39604 65 - 106623 GCAAACATAGAGTCCTGTGGATGTT---ATGCTGACTTCGGCTTGGGGTTTTTCACAGAG-AGAAGCAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2882211 63 - 123690457 GCAAACATAGAGTCCTGTGGATGTT---ATGCTGACTTCGGCTTGGGGTTTTT--CAGAG-AGAAGCAC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73894975 67 + 74750902 GCAAAC--AGAGTGCTGTGGAGGTTATCATGCTGACTTTATCTTTGGGTTTTTCACAGAGTAGATGCAC i calJac3.chr17 I 3886 I 1 s cebCap1.NW_016107444v1 6422565 69 + 6778120 GCAAACATAGAGTCCTGTGGATGTTATCATGCGGACTTCAGCCTGGGGTTTTTCACAGAGTAGATGCAC i cebCap1.NW_016107444v1 I 4012 I 1 s otoGar3.GL873829 239450 64 + 608964 GC-----CAGGATTCTGTGGATGTGATCGTGCTGACTTCAGCTTGGGGCTTTGCACATACTAGAAGCAC i otoGar3.GL873829 C 0 C 0 e dasNov3.JH569502 2724060 11544 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17325239 1518 - 17725628 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=61099.000000 s hg38.chr3_KI270934v1_alt 93454 28 + 163458 -GGCAAGGGGGACTCCAtcaggttggtgc s panTro5.chr3 2566416 28 - 202621043 -GGCAGGGGGGACTCCAtcaggttggtgc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 154529 28 - 190779 -GGCAGGGGGGACTCCAtcaggttggtgc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 39669 28 - 106623 -GGCAGGGGGGACTCCAtcaggttggtgc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2882274 28 - 123690457 -AGGAGGGGGGATTCCAtcaggttggtgc i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73895043 28 + 74750902 -GGCAGGGGTGATTCTGttaggttggtac i calJac3.chr17 I 1 I 312 s saiBol1.JH378146 17326757 28 - 17725628 -GGCAGGGGTGATTCCAttaggttggtac i saiBol1.JH378146 I 1518 C 0 s cebCap1.NW_016107444v1 6422635 28 + 6778120 -GGCAGGGGTGATTCTGttaggttggtac i cebCap1.NW_016107444v1 I 1 C 0 s otoGar3.GL873829 239514 15 + 608964 AGGCAGGGGGGTTTC-------------- i otoGar3.GL873829 C 0 C 0 e dasNov3.JH569502 2724060 11544 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=122587.000000 s hg38.chr3_KI270934v1_alt 93482 68 + 163458 aaaggtaattgctgttttcgcaattaaaa-taatgggaaaaactgcaattacctttgcacccacctaaT s panTro5.chr3 2566444 68 - 202621043 aaagataattgctgtttttgcaattaaaa-taatgggaaaaactgcgattacctttgcatccacctaaT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 154557 68 - 190779 aaagataattgctgtttttgcaattaaaa-taatgggaaaaactgcgattacctttgcacccacctaaT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 39697 67 - 106623 aaaggtaattgctgtttttgcaattaaaa-taatgggaaaaactgcgattacctttgca-ccacctaaT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2882302 68 - 123690457 aaaggtaattgctgtttctgcaattaaaa-taatgggaaaaactgcgattacctttgcacccacctaaT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73895383 69 + 74750902 aaaggtagtttctgtttttgcaattaaaatttatggcaaaaattgcaattacccttatgccaacctaaT i calJac3.chr17 I 312 C 0 s saiBol1.JH378146 17326785 69 - 17725628 aaaggtagttgctgtttctgcaattaaaagttatggcagaaattgcacttacctttacgcccacctaaT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6422663 69 + 6778120 aaaggtagttgctgtttttgcaattaaaagttatggcaaaaattgcaattacctttatacccacctaaT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 239529 1 + 608964 --------------------------------------------------------------------T i otoGar3.GL873829 C 0 C 0 e dasNov3.JH569502 2724060 11544 - 6579706 I e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=91390.000000 s hg38.chr3_KI270934v1_alt 93550 27 + 163458 AACTTATCT-AGGGGACTCTTTCTCCAC s panTro5.chr3 2566512 27 - 202621043 AACTTATCT-AGGGGACTCTTTCTCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 154625 27 - 190779 AACTTATCT-AGGGGACTCTTTCTCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 39764 27 - 106623 AACTTATCT-AGGGGACTCTTTCTCCAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2882370 27 - 123690457 AACTTATCT-AGGGGACTCTTTCTCCAC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73895452 25 + 74750902 AATTTACCT-AGAGGACTC--TCTCCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17326854 27 - 17725628 AATTTATCT-AGGGGACTCTTTCTCCAC i saiBol1.JH378146 C 0 I 5 s cebCap1.NW_016107444v1 6422732 27 + 6778120 AATTTATCT-AGGGGACTCTTTCTCCAC i cebCap1.NW_016107444v1 C 0 I 5 s otoGar3.GL873829 239530 27 + 608964 AACTCATCT-AGGTGACTCTTTCTCTAC i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2735604 28 - 6579706 AACTTCTCTCAGAGGATTCTTTCTCCAT i dasNov3.JH569502 I 11544 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=37484.000000 s hg38.chr3_KI270934v1_alt 93577 16 + 163458 CCAAAACCCAGGACAC s panTro5.chr3 2566539 16 - 202621043 CCAAAACCCAGGACAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 154652 16 - 190779 CCAAAACCCAGGACAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 39791 16 - 106623 CCAAAACCCAGGACAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2882397 16 - 123690457 CCAAAGCCTAGGACAC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73895477 14 + 74750902 --AAAGCCCAGGACAC i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 239557 16 + 608964 CCAAAGCCCAGGACAC i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 2735632 16 - 6579706 CCAAAGCCCAGGACAT i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17326881 5 - 17725628 I e cebCap1.NW_016107444v1 6422759 5 + 6778120 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=14691.000000 s hg38.chr3_KI270934v1_alt 93593 9 + 163458 TTGGCCCAC s panTro5.chr3 2566555 9 - 202621043 TTGGCCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 154668 9 - 190779 TTGGCCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 39807 9 - 106623 TTGGCCCAC i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 73895491 9 + 74750902 TTGGCCCAC i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 239573 9 + 608964 ATGGCTCAC i otoGar3.GL873829 C 0 I 2 s dasNov3.JH569502 2735648 9 - 6579706 TTAGCCTAC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17326881 5 - 17725628 I e cebCap1.NW_016107444v1 6422759 5 + 6778120 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=-2246.000000 s hg38.chr3_KI270934v1_alt 93602 1 + 163458 -A s panTro5.chr3 2566564 1 - 202621043 -A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 154677 1 - 190779 -A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 39816 1 - 106623 -A i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 73895500 1 + 74750902 -T i calJac3.chr17 C 0 T 19 s dasNov3.JH569502 2735657 1 - 6579706 T- i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17326881 5 - 17725628 I e cebCap1.NW_016107444v1 6422759 5 + 6778120 I e otoGar3.GL873829 239582 2 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=1054.000000 s hg38.chr3_KI270934v1_alt 93603 2 + 163458 AC s panTro5.chr3 2566565 2 - 202621043 AC i panTro5.chr3 C 0 I 3 s panPan2.chrUn_NW_014024201v1 154678 2 - 190779 AC i panPan2.chrUn_NW_014024201v1 C 0 I 3 s gorGor5.CYUI01000576v1 39817 2 - 106623 AC i gorGor5.CYUI01000576v1 C 0 C 0 s dasNov3.JH569502 2735658 2 - 6579706 TC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17326881 5 - 17725628 I e calJac3.chr17 73895501 19 + 74750902 T e cebCap1.NW_016107444v1 6422759 5 + 6778120 I e otoGar3.GL873829 239582 2 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=584.000000 s hg38.chr3_KI270934v1_alt 93605 3 + 163458 TAC s gorGor5.CYUI01000576v1 39819 3 - 106623 TAC i gorGor5.CYUI01000576v1 C 0 C 0 s dasNov3.JH569502 2735660 3 - 6579706 TAT i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17326881 5 - 17725628 I e calJac3.chr17 73895501 19 + 74750902 T e cebCap1.NW_016107444v1 6422759 5 + 6778120 I e otoGar3.GL873829 239582 2 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I e nomLeu3.chr11 2882413 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 154680 3 - 190779 I e panTro5.chr3 2566567 3 - 202621043 I a score=6152.000000 s hg38.chr3_KI270934v1_alt 93608 7 + 163458 ATCACCA s panTro5.chr3 2566570 7 - 202621043 ATCACCA i panTro5.chr3 I 3 C 0 s panPan2.chrUn_NW_014024201v1 154683 7 - 190779 ATCACCA i panPan2.chrUn_NW_014024201v1 I 3 C 0 s gorGor5.CYUI01000576v1 39822 7 - 106623 ATCACCA i gorGor5.CYUI01000576v1 C 0 C 0 s dasNov3.JH569502 2735663 7 - 6579706 ACCACCA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17326881 5 - 17725628 I e calJac3.chr17 73895501 19 + 74750902 T e cebCap1.NW_016107444v1 6422759 5 + 6778120 I e otoGar3.GL873829 239582 2 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=5838.000000 s hg38.chr3_KI270934v1_alt 93615 10 + 163458 CCCCAGGGTT s panTro5.chr3 2566577 10 - 202621043 CCCCAGGGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 154690 10 - 190779 CCCCAGGGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 39829 10 - 106623 CCCCAGGGTT i gorGor5.CYUI01000576v1 C 0 C 0 e dasNov3.JH569502 2735670 0 - 6579706 C e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17326881 5 - 17725628 I e calJac3.chr17 73895501 19 + 74750902 T e cebCap1.NW_016107444v1 6422759 5 + 6778120 I e otoGar3.GL873829 239582 2 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=21460.000000 s hg38.chr3_KI270934v1_alt 93625 41 + 163458 CCAGGACACTTGGCCCATGACTACATCACCACCCCAGGGTT s panTro5.chr3 2566587 41 - 202621043 CCAGGACACTTGGCCCATGACTACATCACCACCCCAGGGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 154700 41 - 190779 CCAGGACACTTGGCCCATGACTACATCACCACCCCAGGGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 39839 13 - 106623 CCAGGACGCTTGG---------------------------- i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 73895482 41 + 74750902 CCAGGACACTTGGCCCACTACTATATTACCACCCCAGGGTT i calJac3.chr17 T 19 T 41 e dasNov3.JH569502 2735670 0 - 6579706 C e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17326881 5 - 17725628 I e cebCap1.NW_016107444v1 6422759 5 + 6778120 I e otoGar3.GL873829 239582 2 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=600.000000 s hg38.chr3_KI270934v1_alt 93666 1 + 163458 C s panTro5.chr3 2566628 1 - 202621043 C i panTro5.chr3 C 0 T 62 s panPan2.chrUn_NW_014024201v1 154741 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 T 62 s calJac3.chr17 73895482 1 + 74750902 C i calJac3.chr17 T 41 C 0 e dasNov3.JH569502 2735670 0 - 6579706 C e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17326881 5 - 17725628 I e cebCap1.NW_016107444v1 6422759 5 + 6778120 I e otoGar3.GL873829 239582 2 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I e nomLeu3.chr11 2882413 0 - 123690457 C e gorGor5.CYUI01000576v1 39852 0 - 106623 C a score=2066.000000 s hg38.chr3_KI270934v1_alt 93667 20 + 163458 CAGGACACTTGGCCCACAAC s gorGor5.CYUI01000576v1 39852 7 - 106623 -------------CCACAAC i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 73895483 20 + 74750902 CAGGACACTTGGCCCACTAC i calJac3.chr17 C 0 C 0 e dasNov3.JH569502 2735670 0 - 6579706 C e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17326881 5 - 17725628 I e cebCap1.NW_016107444v1 6422759 5 + 6778120 I e otoGar3.GL873829 239582 2 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I e nomLeu3.chr11 2882413 0 - 123690457 C e panPan2.chrUn_NW_014024201v1 154742 62 - 190779 T e panTro5.chr3 2566629 62 - 202621043 T a score=18142.000000 s hg38.chr3_KI270934v1_alt 93687 20 + 163458 TACATCACCACCCCAGGGTT s panTro5.chr3 2566567 20 - 202621043 TACATCACCACCCCAGGGTT i panTro5.chr3 T 62 C 0 s panPan2.chrUn_NW_014024201v1 154680 20 - 190779 TACATCACCACCCCAGGGTT i panPan2.chrUn_NW_014024201v1 T 62 C 0 s gorGor5.CYUI01000576v1 39859 20 - 106623 TACATCACCACCCCAGGGTT i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 73895503 20 + 74750902 TATATTACCACCCCAGGGTT i calJac3.chr17 C 0 C 0 e dasNov3.JH569502 2735670 0 - 6579706 C e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e saiBol1.JH378146 17326881 5 - 17725628 I e cebCap1.NW_016107444v1 6422759 5 + 6778120 I e otoGar3.GL873829 239582 2 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=2100.000000 s hg38.chr3_KI270934v1_alt 93707 1 + 163458 C s panTro5.chr3 2566587 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 154700 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 39879 1 - 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 73895523 1 + 74750902 C i calJac3.chr17 C 0 T 23 s saiBol1.JH378146 17326886 1 - 17725628 C i saiBol1.JH378146 I 5 C 0 s cebCap1.NW_016107444v1 6422764 1 + 6778120 C i cebCap1.NW_016107444v1 I 5 C 0 e dasNov3.JH569502 2735670 0 - 6579706 C e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e otoGar3.GL873829 239582 2 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=23367.000000 s hg38.chr3_KI270934v1_alt 93708 18 + 163458 CAGGACACTTGGCCCATG s panTro5.chr3 2566588 18 - 202621043 CAGGACACTTGGCCCATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 154701 18 - 190779 CAGGACACTTGGCCCATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 39880 18 - 106623 CAGGACACTTGGCCCATG i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 17326887 18 - 17725628 CAGGACACTTGGCCCACT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6422765 18 + 6778120 CAGGACACTTGGCCCACT i cebCap1.NW_016107444v1 C 0 C 0 e dasNov3.JH569502 2735670 0 - 6579706 C e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e calJac3.chr17 73895524 23 + 74750902 T e otoGar3.GL873829 239582 2 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=1179.000000 s hg38.chr3_KI270934v1_alt 93726 1 + 163458 A s panTro5.chr3 2566606 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 154719 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 39898 1 - 106623 A i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 73895501 1 + 74750902 A i calJac3.chr17 T 23 C 0 s saiBol1.JH378146 17326905 1 - 17725628 A i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6422783 1 + 6778120 G i cebCap1.NW_016107444v1 C 0 C 0 e dasNov3.JH569502 2735670 0 - 6579706 C e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e otoGar3.GL873829 239582 2 + 608964 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=12946.000000 s hg38.chr3_KI270934v1_alt 93727 6 + 163458 CTACAT s panTro5.chr3 2566607 6 - 202621043 CTACAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 154720 6 - 190779 CTACAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 39899 6 - 106623 CTACAT i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 73895502 6 + 74750902 CTATAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17326906 6 - 17725628 CTATAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6422784 6 + 6778120 CTATAT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 239584 6 + 608964 CTACAC i otoGar3.GL873829 I 2 C 0 e dasNov3.JH569502 2735670 0 - 6579706 C e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=21527.000000 s hg38.chr3_KI270934v1_alt 93733 8 + 163458 CACCACCC s panTro5.chr3 2566613 8 - 202621043 CACCACCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 154726 8 - 190779 CACCACCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 39905 8 - 106623 CACCACCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2882413 8 - 123690457 CACCACCC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73895508 8 + 74750902 TACCACCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17326912 7 - 17725628 TACCA-CC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6422790 8 + 6778120 TACCACCC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 239590 8 + 608964 CACCACCC i otoGar3.GL873829 C 0 C 0 e dasNov3.JH569502 2735670 0 - 6579706 C e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=470008.000000 s hg38.chr3_KI270934v1_alt 93741 189 + 163458 CAGGGTTCTTTACTATAGTTTTCTTGTTCTTCCTTCAATTACGTGTGACATTCCCAACTCCAAGATTCTTCCAGTCCTTCTCTCCCCCTTCATCTAAAGCAGGCTGTCATGAGTTTCTGTCAGCTGCA--ATCAAGAGTCATGACTCT----TAC---Agtgggt-agga--------------------------------ttactcccttttttgttgtcat-----------------------------------------------------taaggaa s panTro5.chr3 2566621 189 - 202621043 CAGGGTTCTTTACTATAGTTTTCTTGTTCTTCCTTCAATTACGTGCGACATTCCCAACTCCAAGATTCTTCCAGTCCTTCTCTCCCCCTTTATCTAAACCAGGCTGTCATGAGTTTCTGTCAGCTGCA--ATCAAGAGTCATGACTCT----TAC---AGTAGGT-AGGA--------------------------------TTACTCCCTTTTTTGTTGTCGT-----------------------------------------------------TAAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 154734 189 - 190779 CAGGGTTCTTTACTATAGTTTTCTTGTTCTTCCTTCAATTACGTGTGACATTCCCAACTCCAAGATTCTTCCAGTCCTTCTCTCCCCCTTTATCTAAACCAGGCTGTCATGAGTTTCTGTCAGCTGCA--ATCAAGAGTCATGACTCT----TAC---AGTAGGT-AGGA--------------------------------TTACTCCCTTTTTTGTTGTCGT-----------------------------------------------------TAAGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 39913 189 - 106623 CAGGGTTCTTTACTATAGTTTTCTTGTTCTTCCTTCAATTACGTGCGACATTCCCAACTCCAAGATTCTTCCAGTCCTTCTCTCCCCCTTTATCTAAACCAGGCTGTCATGAGTTTCTGTCAGCTGCA--ATCAAGAGTCATGACTCT----TAC---ACTAGGT-AGAA--------------------------------TTACTCCCTTTTTTGTTGTCAT-----------------------------------------------------TAACGAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2882421 189 - 123690457 CAGGGTTCTTTCCTACAGTTTTCTTGTTCTTCCTTCAATTATGTGTGATATTCCCAACTCCAAGATTCTTCCAGTCCTTCTCTCCCCCtttatctaaaccaggctgtcatgggtttctgtcagctgca--atcaagagtcatgactCt----gac---agtaggt-agga--------------------------------ttactcccttttttgttgtcgt-----------------------------------------------------taaggaa i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73895516 192 + 74750902 CAGGGTTCTTTCCTATAGTTTTCTTGTTCGTCCTTCAATTATGTGCAATATTCCCAACGCAAAGATTCTTCCAATA-TCCTCTCCCCCTTTATCTAAACCAGATTGTCATGAGTTTCCGTCAGCTGCATCAAAAAGAGTCACGACTCT----TACC--AGCAGGTTAATT--------------------------------TTACTACCTTTTTTGTTGTTTT-----------------------------------------------------TAAGGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17326919 191 - 17725628 CAGGGTTCTTTCCTATAGTTTTCTTGCCCTTCCTT--ATTATGTGCAATAGTCCCAACTCCAAGATTCTTCCAATAGTCCTCTCCCCCtttatctaaaccaggttgtcatgggtttctgtcagctgca--ataaagagtcatgactCT----TAATAAAACAGGTGAATT--------------------------------TTACTACCTTTTTTGTTGTTGT-----------------------------------------------------TAAGGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6422798 190 + 6778120 CAGGGTTCTTTCCGATAGTTTTCTTGTTCTTCCTTCAATTCTGTGCAATATTCCCAACTCCAAGATTCTTCCAGTAGTCCTCTCCCCCtttatctaaaccaggttgtcatgggtttctgccagctgcaatagaaagagtcatgactCC----TAAC--AGCAGGTGAATT--------------------------------TTACTACCTTTTTTGTTG---T-----------------------------------------------------TAAGGAA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 239598 184 + 608964 CAGTGTCCTTTCCTATAGTTTTCTTGTTCTTCCTTC-ATTATGTCAGAGAGCCTCCACCCC-AGGTTTTTCTAGTAGCCCCCTCCCCCTT-ATCAaaactagtttggcatgggttactgtcacctacaacctaaagagatttgactCT----TAAT--AATAGGT-AGTG--------------------------------TTAC-----CTTGTATTGACAG-----------------------------------------------------GTAGGAA i otoGar3.GL873829 C 0 N 0 s dasNov3.JH569502 2735670 276 - 6579706 TAGTGTCCTTCCCTGTAGTTTCTTTGTTCTTcttttgattacataaaatattccc----ccagtattctcccaataccctcccccttctttatataaactaatttggcataggtttctgtcacctataaccaaaagaatcatgtctCTCTTATGT---AACAGAT-GATTGCTGTTAACTCTttccttcctaccatcctttcttccttcctttcttccttccttctttccttctttctctttcttctctttcattctctctctctttctttctttTGTAAGGAC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=189749.000000 s hg38.chr3_KI270934v1_alt 93930 73 + 163458 acctgtaagaggaaaaacaaacacactttatgtggagagacagggaaagttgttctattcagtctggaatcta s panTro5.chr3 2566810 73 - 202621043 ACCTGTAAGAGGAAAAACAAACACACTTTATGTGGAGAGACAGGGAAAGTTGTTCTATTCAGTCTGGAATCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 154923 73 - 190779 ACCTGTAAGAGGAAAAACAAACACACTTTATGTGGAGAGACAGGGAAAGTTGTTCTATTCAGTCTGGAATCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 40102 73 - 106623 ACCTGTAAGAGGAAAAACAAACACACTTTATGTGGAGAGACAGGGAAAGTTGTTCTATTCAGTCTGGAATCTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2882610 73 - 123690457 atctgtaagaggaaaaacaaacgcacttcatgtggagagacagggaaagttgttctattcaatctggaatcta i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73895708 73 + 74750902 ACCTTTAAGAGGAAAAACAAATGCACCTCATGTGGAGAGACAGGAAAAGTTGTTATATTGAGTCTAAAATCTA i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 17327110 73 - 17725628 ACCTTTGAGAGGAAAAACAAATGCACCTCATGTGGAGAGACAGGAAAAGTTGTTATATTAAGTCTAAAATCTA i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 6422988 73 + 6778120 AACTTTAAGAGGAAAAACAAATGCACCTCATGTGGAGAGACAGGAAAAGTTGTTATATTAAGTCTAAAATCTA i cebCap1.NW_016107444v1 C 0 I 22 s dasNov3.JH569502 2735946 73 - 6579706 ACTTCtaagaagaaaaacaactgcatctggtctggagaggtggaaactgctgatacagtaagtccagaatcta i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=30128.000000 s hg38.chr3_KI270934v1_alt 94003 23 + 163458 -gtccctcagcTGGTGGTCCACCT s panTro5.chr3 2566883 23 - 202621043 -GTCCCTCAGCTGGTGGTCCACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 154996 23 - 190779 -GTCCCTCAGCTGGTGGTCCACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 40175 23 - 106623 -GTCCCTCAGCTGGTGGGCCACCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2882683 23 - 123690457 -gtccctcagctggcgggcCACCT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73895782 22 + 74750902 -GTCCCTGAGCTAGAAGGCACCC- i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17327184 21 - 17725628 -GTCCCTGAGCTAGAAGGCA-CC- i saiBol1.JH378146 I 1 C 0 s dasNov3.JH569502 2736019 24 - 6579706 gatcccttagTCTGCAGGCCATCT i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e cebCap1.NW_016107444v1 6423061 22 + 6778120 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=665173.000000 s hg38.chr3_KI270934v1_alt 94026 274 + 163458 TCGGATTCACTggtcttgggagtaagacggtgccttgtagtcaaagaagtgaggaattctggtgcctcctgagggtggaactgaggagaggagacgtgagagaggatgctggaaaggaggaagcagccagaatgtgtagggcctttgtggccaggccaaggagcctcagggaatatctgagc-gtcttaaataggtcagagggcaattctg-----------------aaaacaaactccttctacctgctgtgtaggcaatgagttgtcattgtt-agatagaggataaaat s panTro5.chr3 2566906 274 - 202621043 TCGGATTCACTggtcttgggagtaagacggtgccttgtagtcaaagaagtgaggaattctagtacctcctgagggtggaattgaggagaggagacgtgagagaggaagctggaaaggaggaagcagccagaatgtgtagggcctttgtggccatgccaaggagcctcagggaatatctgagc-gtcttaaataggtcagagggcaattctg-----------------aaaacaaactccttctacctgctgtgtagacaatgagttgtcattgtt-agatagaggataaaat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 155019 274 - 190779 TCGGATTCACTggccttgggagtaagacggtgccttgtagtcaaagaagtgaggaattctagtacctcctgagggtggaattgaggagaggagacgtgagagaggatgctggaaaggaggaagcagccagaatgtgtagggcctttgtggccatgccaaggagcctcagggaatatctgagc-gtcttaaataggtcagagggcaattctg-----------------aaaacaaactccttctacctgctgtgtagacaatgagttgtcattgtt-agatagaggataaaat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 40198 274 - 106623 TCAGATTCACTggtcttgggagtaagacggtgccttgtagtcaaagaagtgaggaattctagtacctcctgagggtggaattgaggagaggagacgtgagagaggatgctggaaaggaggaagcagccagaatgtgtagggcctttgtggccatgccaaggagcctcagggaatatctgagc-atcttaaataggtcagagggcaattctg-----------------aaaacaaactccttctacctgctgtgtagacaatgagttgtcattgtt-agatagaggataaaat i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2882706 273 - 123690457 TCGGATTCACTggtcttgggagtaaga--gtgcctcgtagtcaaagaagtgaggaattttagtagctcctgagggtggaactgaggagaggagacgtgagagaggatgctggaaaggaggatgcagccagaatgtgtagggcctttgtggccatgccaaggagcctcagggaatatctgagc-atcttaaataggtcagatggcaattctg-----------------aaaacaaattccttctacctgctgtgtagacaatgagttgtctttggtaagataggggataaaac i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73895804 293 + 74750902 TCGGATTCAGTggtcttggaagtaagacagtgcctggtaatcaagaaggtaagaaattctagtatctcctgagggaagaattgaggagaagagaagtgagggaggacagtggaaaggaagatggggccagaatgtgtagggcctttttggccatgccaaggagcatcagggaatatctgagcagtcttaaatagatcaaacggcaattctgaaaaaaaaaaaaaaaaaaaaaaaaaatccttctatccagggtgtagagaatgagttgtaattggcaagataggggacataat i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17327205 275 - 17725628 TCGGATTCAGTgctcttggaagtgagaccgtgcctggtaatcaaaaaggtgaggaattctagtatctcctgagggtagaattgaggagaagagaagtgagagaggacagtggaaaggaaaatggga-cagaatgtgtagggcctttttggccatgccaaggagcatcggggaatacctgagcagtcttaaacagatcaaacagcaagtctg-----------------aaaaaaaattccttctatccactgtgtagagaatgtgttgtaattggttagataggggatataaa i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6423083 276 + 6778120 tcggattcagtggtcttggaggtaagacagtgcctggtaatcaaaaaggtgaggaattctagtatctcttgagggtagaattgaggagaagagaagtgagagaggacagtggaaaggaagatggggccagagtatgtagggcctttttggccatgccaaggagcatcagggaatatctgagcagtcttaaatagatcaaatggcaagtctg-----------------aaaaaaaatcccttctatccactgtgtagagaatgagttgtaactggtaagataggggttacaat i cebCap1.NW_016107444v1 I 22 C 0 s dasNov3.JH569502 2736043 265 - 6579706 TCATATTAACTagtcctggaggtaagacaatgcctggtgatcaaggaagtgaagcatttcagtatggcttgagggtaaaattcaggaaagtagaagtaagagaagactgtggaaaggaagacagggctagaaag-ggagggccttgctggccataccaatgaacatcaaggaatatctgaagggtcttaaacaggtcaaatggtatttttt-----------------aaaac---tttcctctagctactgtgaagagaatgaattggaagtggt-------aaaagaaaat i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 19181161 2596 - 19675229 I e colAng1.NW_012118932v1 7394080 2213 - 7796314 I e manLeu1.NW_012102020v1 1458839 2926 + 1977891 I e chlSab2.chr15 91387209 2237 + 91754291 I e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac8.chr2 2375877 2559 - 204787373 I a score=3573188.000000 s hg38.chr3_KI270934v1_alt 94300 499 + 163458 gaacccaattagattattgccatcattc-cagtgattgaagatgttgatctgtaatagggtaatggccatacactttcgagaggaaaaatgttcaaatttaggggataattagaaatctgcacttacagcccttggtgacacttttcctatgagccaaacggag-----------agggggagagagagagaaggtgga--cagtcaccgacatatgaggcagtggaagaggaacaggcatggataggaagagaatt--gtgggac----acactgggttcgagatgcctgtgtgagacagtctcatgaatatgtccagtagtatattgaccaagcaagtctg----tcaggagcctctggaaatgaggtacagaatttgatagtcatcactatggagatggtaacctgagccgtgagagaagctaaaatcc-ccggggagaggatgtagaatgagaggagaaaatgggccagg----acaa--acacaaggaa-----------------------------------------tgctcggagggaggggcaaaaccagaacagtaca--gc s panTro5.chr3 2567180 527 - 202621043 gaacccaattagattactgccatcattc-gagtgatagaagatgttgatctgtaatagggtaatggccatacactttcgaggggaaaaatgttcaaatttagggggtaattagaaatctgcacttacagcccttggtgacacttttcctatgagccaaatggag-----------agggggagagagagagaaggtgga--cagtcaccgacgtatgaggcagtggaagaggaacaggcatg------aagagaattatgtgggac----acattgggttcgagatgcctgtgtgagacagtctcatgaatatgtccagtaatatattgaccaatcaagtctg----tcaggagcctctggaaatgaggtacagaatttgatagtcatcactatggagatggtaacctgagccgtgagagaagctaaaatcc-ccggggagaggatgtagaatgagaggagaaaatgggccagg----acaa--acacaaggaaccccgacata-aaggg-----ctgaaca---caggagggggtgctcagagggaggggcaaaaccagaacagtaca--gc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 155293 533 - 190779 gaacccaattagattactgccatcattc-gagtgatagaagatgttgatctgtaatagggtaatggccatacactttcgaggggaaaaatgttcaaatttagggggtaattagaaatctgcacttacagcccttggtgacacttttcctatgagccaaacggag-----------agggggagagagagagaaggtgga--cagtcaccgacatatgaggcagtggaagaggaacaggcatggataggaagagaattatgtgggac----acattgggttcgagatgcctgtgtgagacagtctcatgaatatgtccagtaatatattgaccaagcaagtctg----tcaggagcctctggaaatgaggtacagaatttgatagtcatcactatggagatggtaacctgagccgtgagagaagctaaaatcc-ccggggagaggatgtagaatgagaggagaaaatgggccagg----acaa--acacaaggaaccccgatata-aaggg-----ctgaaca---caggagggggTGCTCagagggaggggcaaaaccagaacagtaca--gc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 40472 533 - 106623 gaacccaattagattattgccatcattc-gagtgatagaagatgttgatctgtaatagggtaatggccatacactttcgaggggaaaaatgttcaaatttaggggataattagaaatctgcacttacagcccttggtgacacttttcctatgagccaaacggag-----------agggggagagagagagaaggtgga--cagtcaccgacatatgaggcagtggaagaggaacaggcatggataagaagagaattatgtgggac----acattgggttcgagatgcctgtgtgagacagtctcatgaatatgtccagtaacatattgaccaagcaagtctg----tcaggagcctctggaaatgaggtacagaatttgatagtcatcactatggagatggaagcctgagccgtgagagaagctaaaatcc-ccggggagaggatgtagaaagagaggagaaaatgggccagg----acAA--ACACAAGGAATGCCGACATA-AAGGG-----CTGATCA---CAGGAGGGGGTGCTCagagggaggggcaaaaccagaacagtaca--gc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2882979 527 - 123690457 gaacccaattagattattgccatcattc-gagtgatagaagatgttgatctgtaatagggtaatggccatacactttagaggggaaaaatgttcaaatttaggggataattagaaatctgcacttacagcccgtggtgacacttttcctatgagccaaacagag-----------agggggagagagagagaaggtgga--cagtcaccgacgtatgaggcagtggaagaggaacagg-atggacaggaagagaattatgtgggac----acattgggttcgacacgcctgtgt--gacagtctcatgaatatgtctagtaatatattgagcaagcaagtctg----tcaggagcctccggaaatgaggtacagaatttgatagtcatcactgtggagatggtaccccgagccatgagagaagctaaaatcc-ccgggcagaggatgtagaac--gaggagaaaatgggccagg----acaa--acacaaggaatgccgacata-aaggg-----ctgaaca---gaggagggggtgctcagagggaggggcaaaaccagaacagta-a--gc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 2378436 528 - 204787373 gaacccagttagattattgcagtcattc-gagtgatagatgatgttgatctgtaatagggtaatggtcatacactttagaggggaaaaatgttcaaacttaggggataatgagaaatctgcacccacagcccttggtgacacttttcctatgagccaaatgtag-----------aggtggagagagagagaaggcgga--cagccactgacgtaggaggcagtggaagaggaacaggcacggacaggaagagaattacctgggac----acactgggtttgagaggcctgtgtgagacagtctcatgaatgtgtccagtaatgtattgaccaggcgagtccg----tcaggagcctcgggaaatgaggtacagaatttggttgtcatcactgcggagcttgtgacccgagccatgagaggagctaaagtcc-ctggg--gaggatgtagaacgagaggagaaaatgggccagg----acag--acacaagcaatgccgacata-aaggg-----ctgaaca---gaggagggggcgctcagaggga-gggcagaaccagagatgtaca---- i rheMac8.chr2 I 2559 C 0 s macFas5.chr2 192444710 528 - 192460366 gaacccagttagattattgcagtcattc-gagtgatagaagatgttgatctgtaatagggtaatggtcatacactttagaggggaaaaatgttcaaacttaggggataatgagaaatctgcacccacagcccttggtgacacttttcctatgagccaaatgtag-----------aggtggagagagagagaaggcgga--cagccactgacgtaggaggcagtggaagaggaacaggcacggacaggaagagaattacctgggac----acactgggtttgagaggcctgtgtgagacagtctcatgaatgtgtccagtaacgtattgaccaggcgagtccg----tcaggagcctcgggaaatgaggtacagaatttggttgtcatcactgcggagctggtgacccgagccatgagaggagctaaagtcc-ccggg--gaggatgtagaacgagaggagaaaatgggccagg----acag--acacaagcaatgccgacata-aaggg-----ctgaaca---gaggagggggcgctcagaggga-gggcagaaccagagatgtaca---- i macFas5.chr2 I 2558 C 0 s macNem1.NW_012014355v1 19183757 528 - 19675229 gaacccagttagattattgcagtcattc-gagtgatagaagatgttgatctgtaatagggtaatggtcatacactttagaggggaaaaatgttcaaacttaggggataatgagaaatctgcacccacagcccttggtgacacttttcctatgagccaaatgtag-----------aggtggagagagagagaaggcgga--cagccactgacgtaggaggcagtggaagaggaacaggcacggacaggaagagaattacctgggac----acactgggtttgagaggcctgtgtgagacagtctcatgaatgtgtccagtaacgtattgaccaggcgagtccg----tcaggagcctcgggaaatgaggtacagaatttggttgtcatcactgcagagctggtgacccgagccatgagaggagctaaagtcc-ccggg--gaggatgtagaacgagaggagaaaatgggccagg----acag--acacaagcaatgccgacata-aaggg-----ctgaaca---gaggagggggcgctcagaggga-gggcagaaccagagatgtaca---- i macNem1.NW_012014355v1 I 2596 C 0 s chlSab2.chr15 91389446 528 + 91754291 gaacccagttagattattgccgtcattc-gagtgatagaagatgttgatctgcactagggtaatggccatacactttagaggggaaaaatgttcaaacttaggggataATGATAAATCTGCACCCACAGCCCTTGGTGACACTTTTCCTATGAGCCAAATGT-------------AGAGGGGCAGAGAGAGAAGGCGGA--CAGCCACTGACGTatggggcagtggacgaggaacaggcacggacaggaagagaattatctgggac----acactgggtttgacaggcctgtgtgagacagtctcgtgaatatgtccagtaacgtatcgaccaggcaagtctg----tcaggagcctcgggaaatgaggtacagaatttggtagtcatcactgcggagctggtgacccgagccatgagaggagctaaagtcc-ccggggagaggatgaagaatgagaggagaaaatgggccagg----acag--acacaagcaatgccgacata-aaggg-----ctgaaca---gaggagggggcgctcagaggga-gggcagaaccagagatgtaca---- i chlSab2.chr15 I 2237 C 0 s manLeu1.NW_012102020v1 1461765 528 + 1977891 gaacccagttagattattgccgtcattc-gagcgatagaacatgttgatctgtaatagggtaatggccatacactttagagggaaaaaatgttcacacttaggggataatgagaaatctgcacccacagcccttggtgacacttttcctaggagccaaatgtag-----------agagggagagagagagaaggcgga--cagccactgacgtaggaggcagtggaagaggaacaggcacggacaggaagagaattacctgggac----acactgggtttgagaggcctgcgtgagacagtctcatgaatatgtccagtaacgtattgaccaggcgagtccg----tcaggagcctcgggaaatgaggtacagaatttggttgtcatcactgcggagctggtgacccgagccatgagaggagctaaagtcc-ccggg--gaggatgtagaacgagaggagaaaatgggccagg----acag--acacaagcaatgcggacata-aaggg-----ctgaaca---gaggagggggcgcccagaggga-gggcagcaccagagatgtaca---- i manLeu1.NW_012102020v1 I 2926 C 0 s colAng1.NW_012118932v1 7396293 527 - 7796314 gaacccaattagattattgctgtcattc--agtgatagaagatgttgatctgtaatagggtaatggccacacactttagaggggaagaatgttcaaatttaggggataatgagaaatctgcactcacagcccttggtgacacttttcctatgagccaaatgtag-----------agggggagagagaggg--ggcgga--cagccactgacgtatgaggcagtggaagaggaacaggcatggagaggaagagaattatctgaga-----acactgggtttgaggggcctgtgtgagacagtctcatgaatatgtccagtaacgtattgaccaggcaagtctg----tcgggagcctcaggaaatgaggtacagaatttggtagtcatcaccgtggagctggtgacccgagccatgagagacgctaaagtcc-cccgggagagggtgtagaacgagaggagaaggcgggccagg----acag--acacaagcaatgccgacata-aaggg-----ctgaaca---gaggagggg--cctcagcgggaggggcagaaccagagatgtacgac-- i colAng1.NW_012118932v1 I 2213 C 0 s calJac3.chr17 73896097 536 + 74750902 gaacccaattagattattgccatcattc-aagtgatggatgatgttgatctgtaatagggtaatgaccatacatttttgggggg-aaaatgtttaaatttaggggataattagaaatctgcacttacagcacttggtgatacttttcttatgagcaaaaaaaaaaaaaaaaaagccaggggggagagagagaaggtggatacagtcaccgacatatgaggcagtggaagaggaagaggcatggacaggaagagaattatttgggac----acattgggttcgagatgcctgtgtgagacagtttcatgaatatgtccagta----------------agtctg----acaggagcatc-ggaaatgaagtacagcatttggcagtgatcactatggagctggtaagcggagccttaagaggagctaacatcc-ctggggagagtatgtagactgagaggaggaaatggcccaggacacacag--acacaaggaatgccaacatttaaggg-----ctggacagaggaggaggggaagctcagagggaggggcgaaaccagaaaagtaca--gt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17327480 525 - 17725628 gaacccaattagattattgccgtcattg-gagtgatagatgatgttgatctgtaatagggtaatggccatacattttaggggga-aaaatgtttaaatttaggggataattagacatctgcacttacagcacttggtgatacttttcctgtgagcaaaaaaaag-----------ctggggagagagagagaaggtggatgcagtcactgacctatgaggcagtggaagagggagaggcggggacaggatgagaattatttgggac----acactgggttcgagacgcctgtgtgagacagtttcatgaatatgtccagtaatgtattgacgaagcgagtctg----atgggagcatc-agaaatgaactacagcatttggctgtcatcactatggagccg-------------taagaggagctgaaagcc-ctggggagagtttgtagaatgagaggaggaaatggcccagcacacacag--acacaaggaataccgacacctaaggg-----ctggaca---gaggaggggaagctccgagggagggctgaaaccagaaaagcaca--gt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6423359 500 + 6778120 gaacccaattagattactgccatcattt-gagtgatagatgatgttgatctgcaatagggtaatggccatacattttaggggg--aaaatgtttaaatttaggggataattagaaatctgcacttacagcacctggtgatacttttcctgtgagcaaaaaaaaag----------ccggggagagagagagaaggtggatacagtcactgacatatgaggcagtggaagaaggagaggcatggaccggaagag-attatttgggac----acac--ggttcgagatgcctgtgtgggacagtttcgtgaatatgtccagca----------------agtctg----acgggagc--------atgaagtgcagcatttggccgtcatcactatggagccg-------------tacgaggggctaa-agcc-ctgggcagagtgtgtagaatgagaggaggaaatggcccagcgcgcacag--acacaaggaatgccgacatttaaggg-----ctgggcagaggagga-gggaagcccagagggagggccgaaaccagaaaagcaca--gt i cebCap1.NW_016107444v1 C 0 C 0 s dasNov3.JH569502 2736308 533 - 6579706 gacccctgttagtttattgaaataattctaagtgatagatgattgtgaactaaaacaggatagtgactgtcaacat---agagaaaaaatg-tcagatttaagagatattttgaaaattgcatttacaacacttggcaatgacttgcccatgagcagaa----------------agggggagagagaaagaaggtggg--tggacaat----catgggacattggaagaggaatgaatttgggagggaatagaattagattggatcaggacactgagcttgaaaggacagggtgagatgacctcatcaatatgtccagtcatgtgttggccatccaaacctgaagttcaggagcatgttggaatgaagtatagattttggtaaccatccatatatagatgg-atccagacccatg-gagtagctgaaatccaccagagagagtatgtagagtaagaagagtaaacagtccaag----atagaaacacaagaaatggcaatgttcaagggacagactgaaca-----ggaggaacagctaatcatgg-gggtgaaaatagaagggcaca--gc i dasNov3.JH569502 C 0 C 0 e cerAty1.NW_012004056v1 16420018 5020 - 16847902 I a score=1632358.000000 s hg38.chr3_KI270934v1_alt 94799 195 + 163458 gtccccaaaccaaggaaaagaatgttgccagaagaggagagtcaggctgtttcaaactctgctaagaagtgaaggatgttgcatattgagtagagtccattggggttaccagtcaggct--gactcagggatcctctttggcagaagtagttccaatgaagtgggaggaggaagggaggagcagaggccaaatgagc s panTro5.chr3 2567707 195 - 202621043 gtccccaaaccaaggaaaagaatgttgccagaagaggagagtcaggctgtttcaaactctgctaagaagtgaaggatgttgcatattgagtagagtccattggggttaccagtcaggat--gactcagggatcctctttggcagaagtagttccaatgaagtgggaggaggaaggtagaagcagaggccaagtgagc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 155826 195 - 190779 gtccccaaaccaaggaaaagaatgttgccagaagaggagagtcaggctgtttcaaactctgctaagaagtgaaggatgttgcatattgagtagagtccattggggttaccagtcaggat--gtctcagggatcccctttggcagaagtagttccaatgaagtgggaggaggaaggtgggagcagaggccaaatgagc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 41005 195 - 106623 gtccccaaaccaaggaaaagaatgttgccagaagaggagagtcaggctgtttcaaactctgctaagaagtgaaggatgttgcatattgagtagagtccattggggttaccagtcaggat--gtctcagggatcctctttggcagaagtagttccaatgaagtgggaggaggaagGTAGGAGCAGAGGCCAagtgagc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 2883506 195 - 123690457 atccccgcaccaaggaaaagaatgttgccagaagaggagagtCAGGCTGTTTCAAACTCTGCTAAGAAGTGAAGGACGTTGCATATCGAGTAGAGTCCACTGGGGTTACCAGTCAGGAT--GTTTCAGGGATCCTCTTTGGCAGAAGTAGTTCCAATGAAGTGGGAGGAGGAAGGTAGGAGCAAAGGCCAAGTGAGC i nomLeu3.chr11 C 0 I 10 s rheMac8.chr2 2378964 192 - 204787373 gtccccaaaccaaggaaaagattgtcgccggaagaggagggtcaggctatttcaaact---ctaagaagtgaaggacgtggcgtgttgagtagagtccactggggttaccagtcaggac--gtctcagggatcctctttggcacaagtagttcccgtgaagtgggaggaggaaggtaggagcagaggccaagggagt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192445238 192 - 192460366 gtccccaaaccaaggaaaagattgtcgccggaagaggagggtcaggctgtttcaaact---ctaagaagtgaaggacgtggcgtgttgagtagagtccactggggttaccagtcaggac--gtctcagggatcctctttggcacaagtagttcccgtgaagtgggaggaggaaggtaggagcagaggccaagggagt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19184285 192 - 19675229 gtccccaaaccaaggaaaagactgtcgccggaagaggagggtcaggctgtttcaaact---ctaagaagtgaaggacgtggcgtgttgagtagagtccactggggttaccagtcaggac--gtctcagggatcctctttggcacaagtagttcccgtgaagtgggaggaggaaggtaggagcagaggccaagggagt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16425038 195 - 16847902 GTCCCCaaaccaaggaaaagattgtcgccggaagaggagggtcaggctgtttcaaactctgctaagaagtgaaggacgtggcgtgttcagtagagtccactggggttaccagtcaggac--gtctcagggatcctctttggcagaagtagttcccgtgaagtgggaggaggaaggtaggagcagaggccaagggagc i cerAty1.NW_012004056v1 I 5020 C 0 s chlSab2.chr15 91389974 195 + 91754291 gtccccaaaccaaggaaaagaatgtcgccggaagaggagggtcaggctgtttccaactctgctacgaagtgaaggacgtggcgtgttgagtagagtccattggggttaccagtcaggac--gtctcagggatccactttggcagaagttgttccagtgaagtgggaggaggaaggtgggagcagaggcccagggagc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1462293 192 + 1977891 gtccccaaaccgaggaaaagactgtcgccggaaggggagggtcaggctgtttcaaact---ctaagaagcgaaggacgtggcgtgttcagtagagtccactggggttaccagtcaggac--gtctcagggatcctctctggcagaagtagttcccgtgaagtgggaggaggaaggtaggagcagaggccaagggagc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7396820 195 - 7796314 atccccaaaccaaggaaaagaatgttgccagaagaggagagtcaggctgtttcaaactctgctaagaagtgaaggacgtggcacattgagtagagtccattggggttaccagtcaggac--atctcagggatcctctttggcagaagtagttccagtgaagtgggaggaggaaggtaggagcagaggccaagggagc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73896633 194 + 74750902 gtcccggaatcaaggaaaagagtgtctcaagaagaggagagt-cagctgctccaaactctgctaagaagtgaaggaagttgcatatggagcagagcctgctggggttaccagtcctcat--gctaccaggatcccctttggcagaagcagttccagtgaagtgggagtgggaaggtaggggcagaggccaagtgagc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17328005 195 - 17725628 gtcctggaatcaaggcaaagaatgtcacaagaagaggagagtccggctgcttcaaagtctgctaagaagttaaggaagttgcacgtggagtagagtccactggggttaccggtcagcat--gttaccaggaccccctttggcagaagtagttccagtgaagtgggagtcggaaggtcggggcagaggtcaagtgagc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6423859 195 + 6778120 gtcccggaatcaaggaaaagaatgttgcaagacaaggagagtccggctgcttcaaaccctgctaagaagttgaggaagttgcacacggcgtagagtccattggggttaccagtcagcac--gttaccgggaccccctttggcagaagcagttccagtgaagtgggactaggaaggtaggggtggaggccaagtgagc i cebCap1.NW_016107444v1 C 0 C 0 s dasNov3.JH569502 2736841 182 - 6579706 agcagggaatcaaggagaagagtgttgcaagaagatggtagttaggttgtttcaa----cactaagacgttaaagaagatacatactgaggagactcctttggagtgaccagtctgtactggccacaggaaacctc--tggccaaagtagttccagtggagtgggaatggaa-------gtcaaattacaacgaa-- i dasNov3.JH569502 C 0 C 0 a score=3278696.000000 s hg38.chr3_KI270934v1_alt 94994 472 + 163458 gtgaggagtgtttaggagttgacagaaagtgt-atccacttttttgagacgtttagccaggaagagggagagacatggggcagtaggtggaggaggagatgaaattaagggagtgtatggagttttaaaatggaaag--cttgatcctg-tttaaatg--ctgtt--ttatgcccctac------------gagggcgaggttaaacatac---agaatagaggcataactgatagagccaagactcccacccaggagcgggtttcgagcggcacctctctaattcaatccca-aaggaaaagaggatacatgtgggtccaggtacatgctgaggtttggtggcaggactttgaaggaggtcccatctgatggcttctatttctcctgtgaaatagggga--agccctgtctgctggttgtgatgtgccgtga--cagtcagaaatgcggggaaaaggggacaggtctgaaacgggaggcgttaagaatgggaaagtaaa s panTro5.chr3 2567902 472 - 202621043 gtgaggagtgtttaggagttgacagaaagtgt-atccacttttttgagacgtttagccacgaagagggagagacatggggcagtaggtggaggaggagatgaaattaagggagtgtatggagttttaaaatggaaag--cttgatcctg-tttaaatg--ctgtt--ttatgcccctac------------gagggtgaggttaaacatac---agaatagaggcataactgatagagccaagacccccacccaggagcgggtttcgagcggcacctctctaattcaatccca-aaggaaaagaggatacatgtgggtccaggtacatgctgaggtttgggggcaggactttgaaggaggtcccatctgatggcttctatttctcctgtgaaatagggga--agccctgtctgctggttgtgatgtgccgtga--cagtcagaaatgcggggaaaaggggacaggtctgaaacgggaggcgttaagaatgggaaagtaag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 156021 472 - 190779 gtgaggagtgtttaggaGTTgacagaaagtgt-atccacttttttgagacgtttagccacgaagagggagagacatggggcagtaggtggaggaggagatgaaattaagggagtgtatggagttttaaaatggaaag--cttgatcctg-tttaaacg--ctgtt--ttatgcccctat------------gagggcgaggttaaacatac---agaatagaggcataactgatagagccaagactcccacccaggagcgggtttcgagtggcacctctctaattcaatccca-aaggaaaagaggatacatgtgggtccaggtacatgctgaggtttggtggcaggactttgaaggaggtcccatctgatggcttctatttctcctgtgaaatagggga--agccctgtctgctggttgtgatgtgccgtga--cagtcagaaatgcggggaaaaggggacaggtctgaaacgggaggcattaagaatgggaaagtaag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 41200 472 - 106623 gtgaggagtgtttaggagttgacagaaagtgt-atccacgtttttgagacgtttagccacgaagagggagagacatggggcagtaggtggaggaggagatgaaattaagggagtgtatggagttttaaaatggaaag--cttgatcctg-tttaaatg--ctgtt--ttatgcccctac------------gagggcgaggttaaacatac---agaatagaggcataactgatagagccaagacccccacccaggagcgggtttcgagcggcacctctctaattcaatccca-aaggaaaagaggatacatgtgggtccaggtacatgctgaggtttggtagcaggactttgaaggaggtcccatctgatggcttctatttctcctgtgaaatagggga--agccctgtctgctggttgtgatgtgccgtga--cagtcagaaatgcggggaaaaggggacaggtctgaaacgggaggcattaagaatgggaaagtaag i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2379156 460 - 204787373 gtgaggagcgtttaggagttgacagaaagtgt-atccacttttttgagaagttcagccatgaagaggaagagacaggcggcagtaggtggagagggagatgaaattaa-ggagtgtg-ggagttttaaaatgggaag--cttgatcctgttttaaacg--ctgtt--ttatgcccctac------------aagggcgaggtgaaacatac---agaatagaggcataactgatagagccaaga-ccccacccaggagcgggtttcaagcggcac----ctaattcaatcccg-aaggaaaagaggaaacacgtgggtccagggacatgctgagctttggtggcaggagtttgaaggaggtccggtccgatggcttctatttctcctgtgaaac--ggga--agccctgtctgctggttgtgatgtgccgtga------cacaaatgcggggaaaagggggcaggtctgaaacgggaggccttaagaatggggaagtgag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192445430 461 - 192460366 gtgaggagcgtttaggagttgacagaaagtgt-atccacttttttgagaagttcagccatgaagaggaagagacaggcggcagtaggtggagagggagatgaaattaagggagcgtg-ggagttttaaaatgggaAG--CTTGATCCTGTTTTAAACG--CTGTT--TTATGCCCCTAC------------AAGGGCGAGGTGAAACATAC---AGAATAGAGGCATAACTGATAGAGCCAAGA-CCCCACCCAGGAGCGGGTTTCAAGCGGCAC----CTAATTCAATCCCg-aaggaaaagaggaaacacgtgggtccagggacatgctgagctttggtggcaggagtttgaaggaggtcccgtccgatggcttctatttctcctgtgaaac--ggga--agccctgtctgctggttgtgatgtgccgtga------cagaaatgcggggaaaagggggcaggtctgaaacgggaggccttaagaatggggaagtgag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19184477 461 - 19675229 gtgaggagcgtttaggagttgacagaaagtgt-atccacttttttgagaagttcagccatgaagaggaagagacaggcagcagtaggtggagagggagatgaaattaagggagtgtg-ggagttttaaaatgggaag--cttgatcctgttttaaacg--ctgtt--ttatgcccctac------------aagggcgaggtgaaacatac---agaatagaggcataactgatagagccaaga-ccccacccaggagcgggtttcaagcggcac----ctaattcaatcccg-aaggaaaagaggaaacacgtgggtccagggacatgctgagctttggtggcaggagtttgaaggaggtcccgtccgatggcttctatttctcctgtgaaac--ggga--agccctgtctgctggttgtgatgtgccgtga------cagaaatgcggggaaaagggggcaggtctgaaacgggaggccttaagaatggggaagtgag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16425233 464 - 16847902 gtgaggagcgtttaggagttgacagaaagtgt-atccactgttttgagaagttcagccatgaagaggaagagacaggcggcagtaggtggagggggagatgaaattaagggagtgtg-ggagttttaaaatgggaag--cttgatcctgttttaaacgctctgtt--ttatgcccctac------------aagggcgaggtgaaacatac---agaatagaggcataactgatagagcctagacccccacccagaagcgggtttcaagcggcac----ctaattcaatcccg-aagaaaaagaggaaacacgtgggtccaggaacatgctgagctttggtggcaggagtttgaaggaggtcccgtctgatggcttctatttctcctgtgaaac--ggga--agccctgtctgctggttgtgatgtgctgtga------cagaaatgcggggaaaagggggcaggtctgaaacgggaggccttaagaatggggaagtgag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91390169 464 + 91754291 gtgaggagcgtttaggagttgacagaaagtgt-atccacttttttgagaagttcagtcatgaagaggaagaggcaggcggcagtaggtcg-gggggagatgaagttaagggagtgtgtggagttttaaaatgggaAG--CTCGATCCTGTTTTAAACACTCTGTT--TTATGCCCCTAC------------AAGGGCGAGGTTAAACATAC---AGAATAGAGGCATAACTGACAGAGCCAAGACCCCCACCTAGAAGCGGGTTTCAAGCGGCAC----CTAATTCAATCCCA-Gaggaaaagaggaaacacgtgggtccagggagatgctgagctttggtggcaggagtttgaaggaggtcccgtccgatggcttctatttctcctgtgaaac--ggga--agtcctgtctgctggttgtgatgtgccataa------cagaaatgcagggaaaagggggcaggtctgaaatgggaggccttaagaatggggaagtgag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1462485 461 + 1977891 gtgaggagcgtttaggagttgacagaaagtgt-acccacttttttgagaagttcggccatgaagaggaacagacaggcggcagtaggtggagggggagatgaaattaagggagtgtg-ggagttttagaatgggaag--cttgatcctgttttaaacgctctgtt--ttatgcccctac------------aagggcgaggttaaacatac---agagtagaggcataactgatagagcctagacccccacccagaagcgggtttcaagcggcac----ctaattcaatcccg-aaggaaaagaggaaacacgtgggtccagggacatgctgagctttggtggcaggagtttgaaggaggtcccgtctgatggcttctatttctcctgtgaaac--ggga--agccctgtctgctggttgtgatgtg---tga------cagaaatgcggggaaaagggggcaggtctgaaacgggaggccttaagaatggggaagtgag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7397015 461 - 7796314 atgaggagcgtttaggagttgacagaaagtgt-atccacttttttgagaagtttagccatgaagaggaagagacggg--gcagtaggtggaggaggagatgaaattaagggagtgtgtggagttttaaaacgggaag--cttgatcctgttttaaatgctctgtt--ttctgcccctac------------aagggcaaggttaaacacac---agaatagaggcatcactgatagagccaaga-cccccaccaggagcgggtttcaggcggcac----ctaattcaatccca-aaggaaaagaggaaacacgtgggtccaggaacatgctgagctttggcggcaggagtttgaaggaggtcccgtccgacagcttctatttctcctgtgaaac--cgga--agccctgtctgctggttgtgatgtgccgtga------cagaaatgcaggg-aaaggggacaggtctgaaacgggaggccttaagaatgggaaagtgag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73896827 477 + 74750902 gtgaggagtgtttaggagttgacagaaagtgt-atctgcttttgtgagaagtttagccatgaagaggaacagacatggggccgtaggtgcaggaggagatgaaattaagggaacgtatggagttttaaaatggaaaaa-CTTGATCCTGTTTTAAATGCTCTGTT--TTATGTCCCTGCTCCCTTTCCCTTGAGGGCGAGGTTAAATATGC---AGAATGGAGACATAACTGATAGAGCCAAGACCCCCACCCAGGAGT-GGTTTCAACCAGCATCACTCTAATTCaatcac--aggaaaaaaaggatacatgtgggtccatgtac-cgctgaggtttggtggcaggactttgaaggtggtcccatccggtagcttctacttctcctgtgaaacatggga--ggccctctgtgctggttgtgatgtgcagtga--cagtcagggatgtggagagaaggggacaggtctgaaac------cgttaagaatgggaaa--gAg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17328200 464 - 17725628 gtgaggagtgtttaggagttgacggaaagtgt-gtccgcttttttgagacgtttagccatgaagaggaagagacatggggccgtaggtgccggaagagatcaaattaagggaacctatggagttttaaaatggaaaaa-CTTGATCCTGCTTTAAAGGCTCTGTT--GTATGTCCCTGCTCCCTTTCCCTTGAGGGTGAGGTTAAATATGC---AGAATGGAGACATCACTGATACAGCCAAGA-CCTCACCCAGGAGC-GGT---------------TCCAATTCAATCACAGAGGGAAAAAAGGATACATGGGGGTCCACGTAC-TGCTGAGGTTTGGGGGCAGGA-TTTGAAGGTGGTCCCGTCCGATAGCTTCTATTTCTCCTGTGAAACAGGGGA--GACCCTGTGTGCTGGTTGTGATGTGCAGTGA--CAGTCAGGGATGAGGAGAGAAGGGGACAGGTCTGAAAC------CGTTAAAAATGGAAAAGGGAg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6424054 475 + 6778120 gtgaggagtgttcaggggttgacgcaaagtgt-gtccactcttttgagacgttcagccatgaagaggaagagacgtggggccgcaggtgcaggaggagaggaaattaaggcagcgcatggagttttaaaatggaaaaC-CTTGATCCTGTTTTAAATGCTC---T--TTATGTTCCTGCTCCTTTTCCCTTGGGGGCGAGGTTTTAAATGC---AGAATGGAGACATGACTGATAGAGCCAACA-CCCCACCCAAGCGT-GGTTCCAAGAGGCACCACTCCAGTTCAATCACAGGGGAACAAAAGGGTACATGTGTGTCCACGTAC-TGCTCaggtttggtggcaggactttgaaggcggtcccgtgcgatagcttctatttctcctgtgaaac--gaga--ggccctgtgtgctggttgtgatgtgcagtga--cagtcagggatgtggagagaaggggacaggtctgaaac------cgttaagaatgagaaagcgag i cebCap1.NW_016107444v1 C 0 C 0 s dasNov3.JH569502 2737023 460 - 6579706 gtgagtagtatttaatagttgacagaaattgtggtcaactttttcaagaagtttagctgtgaggaggaagagacataggacaatagctggagaggg----------aagagaggttgtggagttttaagatggggaaacttttcgcctgttttaaatgctctatcagttatgcctctactcactttcccttgagggtgaagttaaacatacagaagaatagaagcataactgagagggccagga-tctca---gggagagggcttcaagggtcac----ttaa--------------------aggacggatgtg-gtgcagatgtgtattgatgtttggtggcgggacactgaaggagttcccttgtgatggtttctatttcctctgtgaggtagggaatgaaatcagtc-actgatagtaaggggcagtgatacggttagagattcagggcaagggagaaaggttgggaatagtccacatggagaatgggaaagtgga i dasNov3.JH569502 C 0 I 691 e nomLeu3.chr11 2883701 10 - 123690457 I a score=1310933.000000 s hg38.chr3_KI270934v1_alt 95466 189 + 163458 ggcaggcgcgatggctcacgcctgtaatcccagcactttgggagctcgaggcgggtggatcacctgaagtcgggcatttgagaccagcctggc-caacatggtgtaaccccatctctactaaaaatacaaaaattagccaggcatggtggtgtgtgcctgtaatcccagctacttgggaggctgaggcag s panTro5.chr3 2568374 189 - 202621043 ggcaggcaccatggctcacgcctgtaatcccagcactttgggagcccgaggcgggtggatcacctgaggttgggcatttgagaccagccaggc-caacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcgtggtggtgtgtgcctgtaatcccagctacttgggaggctgaggcag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 156493 189 - 190779 ggcaggcaccatggctcacgcctgtaatcccagcactttgggagcccgaggcgggtggatcacctgaggttgggcatttgagaccagcctggc-caacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcgtggtggtgtgtgcctgtaatcccagctacttgggaggctgaggcag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 41672 189 - 106623 ggcaggcgcgatggctcacgcctgtaatcccagcactttgggagcccgaggcgggtggatcaccagaggttgggcatttgagacaagcctggc-caacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcatggtggcgtgtgcctgtaatcccagctacttgggaggctgaggcag i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2379616 189 - 204787373 gccgggcacagtggctcacgcctgtaatcccagcacttcggaagcccgaggcaggcggatcacctgaggttgggagtttgagaccagcctggc-taacatggtgaaaccccatctctactaaaaatacaaaacctagccgggcatggtggtgtgtgcgtgtaatcccagctacttgggaggctgaggcag i rheMac8.chr2 C 0 I 19 s macFas5.chr2 192445891 189 - 192460366 gccgggcacagtggctcacgcctgtaatcccagcacttcggaagcccgaggcaggcggatcacctgaggttgggagtttgagaccagcctggc-taacatggtgaaaccccatctctactaaaaatacaaaacctagccgggcatggtggtgtgtgcgtgtaatcccagctacttgggaggctgaggcag i macFas5.chr2 C 0 I 19 s macNem1.NW_012014355v1 19184938 182 - 19675229 gccgggcacggtggctcacgcctgtaatcccagcacttcggaagcccga-gcaggcggatcaccctgagttgggag-ttgagacca--ctggcttaacatggtgaaa--ccatctctactaaaaatac-aaacctagccgggcatggt-gtgtgtgcgtgtaatcccagctacttgggaggctgaggcag i macNem1.NW_012014355v1 C 0 I 39 s cerAty1.NW_012004056v1 16425697 189 - 16847902 gccgggcacggtggctcacgcctgtaatcccagcacttcggaagcccgaggcaggtggatcacctgaggttgggagtttgagaccagcctggc-caacatggtgaaaccccatctctactaaaaatataaaacctagccgggcatggtggtgtgtgcgcgtaatcccagctacttgggaggctgaggcag i cerAty1.NW_012004056v1 C 0 I 19 s chlSab2.chr15 91390633 189 + 91754291 gccgggcgcggtcgctcatgcctgtaatcccagcactttgggagcccgaggcgggtggatcacctgaggttgggcgtttgagaccagcctggc-caacatggtgaaaccctgtctctactaaaaatacaaaaactagccgggcatggtggtgtgtgcgtgtaatcccagctacttgggaggctgaggcag i chlSab2.chr15 C 0 I 19 s manLeu1.NW_012102020v1 1462946 189 + 1977891 gccgggcacggtggcttacgcctgtaatcccagcacttcggaagcccgaggcaggtggatcacctgaggttgggagtttgagaccagcctgac-caacatggtgaaacctcatctctactaaaaatacaaaacctagccgggcatggtggtgtgtgcgcataatcccagctacttgggaggctgaggcag i manLeu1.NW_012102020v1 C 0 I 19 s colAng1.NW_012118932v1 7397476 189 - 7796314 gctgggcgcggttgctcacgcctgtaatcccagcatttcgggagcccgaggcgggtggatcacctgaggttgggagttggagaccagcctggc-caacatggcgaaaccccatctctactaaaaatacaaaaactagccgggcatggtggtgtgtgcgtgtaatcccagctacttgggaggctgaggcag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73897304 188 + 74750902 gtcgagcggggtggctcgcatctgtaatcccagcgctttgggaggccgaggcaggtagatcacctgaggtcaggagttcaagaccagcctggc-caacatggtgaaatcccatctcta-gaaaaatacaaaaattagtcaggcatgatggcgggtgtctgtaatcccagctattctgggggctgagggag i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17328664 188 - 17725628 gctgagcggggtggctcgcatctgtaatcccagcgctttgggaggccgaggcaggtggatcacctgaggtcaggagttcgagaccagcctggc-caacatggtgaaatcccatctcta-gaaaaatgcaaaatttagccgggcatgatggcaggtgtctgtaatcccagctactctggaggctgagggag i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6424529 188 + 6778120 gccgagcggggtggctcgcatctgtaatcccagcgctttgggaggccgaggcaggtggatcacctgaggtcaggagttcgagaccagcctggc-caacatggtgaaatcccatctcta-gaaaaatacaaaacttagccgggcatgatggcaggtgtctgtaatcccagctactccggaggctgagggag i cebCap1.NW_016107444v1 C 0 C 0 e dasNov3.JH569502 2737483 691 - 6579706 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=192875.000000 s hg38.chr3_KI270934v1_alt 95655 35 + 163458 gagaatcgcttgaacccaggaggtggagggtgcag s panTro5.chr3 2568563 35 - 202621043 gagaatcgcttgaacccaggaggtggaggctgcag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 156682 35 - 190779 gagaatcgcttgaacccaggaggtggaggctgcag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 41861 35 - 106623 gagaatcgcttgaacccaggaggtggagggtgcag i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2379824 35 - 204787373 gagaattagttgaactcagctggtggaggttgcaa i rheMac8.chr2 I 19 C 0 s macFas5.chr2 192446099 35 - 192460366 gagaattagttgaacccagctggtggaggttgcaa i macFas5.chr2 I 19 C 0 s cerAty1.NW_012004056v1 16425905 35 - 16847902 gagaattagttgaacccagcaggtggaggttgcaa i cerAty1.NW_012004056v1 I 19 C 0 s chlSab2.chr15 91390841 35 + 91754291 gagaattagttgaacccagcaggtggaggctgcag i chlSab2.chr15 I 19 C 0 s manLeu1.NW_012102020v1 1463154 35 + 1977891 gagaattagttgaacccagcaggtggagcttgcaa i manLeu1.NW_012102020v1 I 19 C 0 s colAng1.NW_012118932v1 7397665 35 - 7796314 gagaatcagttgaacccgggaggtggaggttgcag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73897492 35 + 74750902 gaaaatcgcttgaactcgggaggcagaggctgcag i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17328852 35 - 17725628 gaaaatcgcttgaacccaggaggcagaggctgcag i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6424717 35 + 6778120 gaaaattgcctgaacccgggaggcagaggctgcag i cebCap1.NW_016107444v1 C 0 C 0 e dasNov3.JH569502 2737483 691 - 6579706 I e macNem1.NW_012014355v1 19185120 39 - 19675229 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=30394.000000 s hg38.chr3_KI270934v1_alt 95690 4 + 163458 tgag s panTro5.chr3 2568598 4 - 202621043 tgag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 156717 4 - 190779 tgag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 41896 4 - 106623 tgag i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2379859 4 - 204787373 tgag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192446134 4 - 192460366 tgag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19185159 4 - 19675229 tggt i macNem1.NW_012014355v1 I 39 C 0 s cerAty1.NW_012004056v1 16425940 4 - 16847902 tgag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91390876 4 + 91754291 tgag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1463189 4 + 1977891 tgag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7397700 4 - 7796314 tgag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73897527 4 + 74750902 tgag i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17328887 4 - 17725628 tgag i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6424752 4 + 6778120 tgag i cebCap1.NW_016107444v1 C 0 I 128 e dasNov3.JH569502 2737483 691 - 6579706 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=441698.000000 s hg38.chr3_KI270934v1_alt 95694 104 + 163458 ctgagatcgcgccg-------ctgcactccagactgggtggcaaagcgagactccaactc-----------------aaaaaaaaaaaaaaaaaa--gaatgggaaagggagagtgtCTGGGGAAGCAGC s panTro5.chr3 2568602 102 - 202621043 ctgagatcgcgccg-------ctgcactccagactgggtggcaaagcgagactccatctc-----------------aaaaaaaaaaaaaaaa----gaatgggaaagggagaGTGTCTGGGGAAGCAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 156721 105 - 190779 ctgagatcgcgccg-------ctgcactccagactgggtggcaaagcgagactccatctc-----------------aaaaaaaaaaaaaaaaaa-gaaatgggaaagggagagtgtCTGGGGAAGCAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 41900 106 - 106623 ctgagatcgtgccg-------ctgcactccagactgggtggcaaagcgagacgccatctc-----------------aaaaaaaaaaaaaaaaaaaagaatgggaaagggagagtgtCTGGGGAAGCAGC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2379863 123 - 204787373 ctgagatctcacca-------ctgcactccagcctgggtggcagagcgagactccatctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGAATGGGAAAGTGAGAGCGTCTGGGGAAGCAGC i rheMac8.chr2 C 0 I 8 s macFas5.chr2 192446138 123 - 192460366 ctgagatctcacca-------ctgcactccagcctgggtggcagagcgagactccatctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGAATGGGAAAGTGAGAGCATCTGGGGAAGCAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19185163 108 - 19675229 gcgagatccggcca-------ctgcactccagcctgggcgacacagcgagactcc-tctc--------------aaaaaaaaaaaaaaaaaaaaaaggaatgggaaagtgAGAGCGTCTGGGGAAGCAGC i macNem1.NW_012014355v1 C 0 I 8 s cerAty1.NW_012004056v1 16425944 104 - 16847902 ctgagatctcacca-------ctgtactccagcctgggtggcagagcgagactccatctc-----------------aaaaaaaaaaaaaaaaaaaagaaTGGGAAAGTGAGAGCGTCT--GGAAGCAGC i cerAty1.NW_012004056v1 C 0 I 8 s chlSab2.chr15 91390880 106 + 91754291 ctgagatcgcacca-------ccgcactccagcctgggtggcagagcgagactccatctc-----------------aaaaaaaaaaaaaaaaaaaagaaTGGGAAAGTGAGAGTGTCCGGGGAAGCAGC i chlSab2.chr15 C 0 I 8 s manLeu1.NW_012102020v1 1463193 100 + 1977891 ctgagatctcacca-------ctgcactccagcctgggtggcagagcgagactccatctc-----------------aaaaaaaaaaaaaagaaa------GGGAAAGTGAGAGCGTCTGGGGAAGCAGC i manLeu1.NW_012102020v1 C 0 I 8 s colAng1.NW_012118932v1 7397704 112 - 7796314 ctgagattgcacca-------ctgcactccagcctgggtggcagagcgagactccatctc-----------aaaaaaaaaaaaaaaaaaaaaaaaaaGAATGGGAAAGTGGGAGTGTCTGGGGAAGCAGC i colAng1.NW_012118932v1 C 0 I 8 s calJac3.chr17 73897531 58 + 74750902 gtgagatcgcgccactgcactctgcactccaacctgagcaacagagtgacactccgtc------------------------------------------------------------------------ i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17328891 58 - 17725628 gtgagatcacaccactgcactctgcactccagcctgagcaacagagcgagactccgtc------------------------------------------------------------------------ i saiBol1.JH378146 C 0 C 0 e dasNov3.JH569502 2737483 691 - 6579706 I e cebCap1.NW_016107444v1 6424756 128 + 6778120 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=41875.000000 s hg38.chr3_KI270934v1_alt 95798 49 + 163458 GTTGCCTCGGCAAGGCCTGAGACCGGCT-GGGGTTAGAGATCAGGACTCC s panTro5.chr3 2568704 49 - 202621043 GTTGCCTCGGCAAGGCCTGAGACCGGCT-GCGGTTAGAGATCAGGACTCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 156826 49 - 190779 GTTGCCTCGGCAAGGCCTGAGACCGGCT-GGGGTTAGAGATCAGGACTCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 42006 49 - 106623 GTTGCCTCGGCAAGGCCTGAGACCGGCT-GGGGTTAGAGATCAGGACTCG i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192446261 8 - 192460366 ------------------------------CAGTTAGG------------ i macFas5.chr2 C 0 C 0 s calJac3.chr17 73897589 47 + 74750902 -tTGCCTCACCAAGGCCTGAGACCTGCT-GGGGTTAGATGT-AGGACTTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17328949 48 - 17725628 -tTGCCTCACCAAGGCCTGAGACCTGCTGGGGGTTAGATAT-AGGACTTG i saiBol1.JH378146 C 0 C 0 e dasNov3.JH569502 2737483 691 - 6579706 I e macNem1.NW_012014355v1 19185271 8 - 19675229 I e cebCap1.NW_016107444v1 6424756 128 + 6778120 I e colAng1.NW_012118932v1 7397816 8 - 7796314 I e manLeu1.NW_012102020v1 1463293 8 + 1977891 I e chlSab2.chr15 91390986 8 + 91754291 I e cerAty1.NW_012004056v1 16426048 8 - 16847902 I e rheMac8.chr2 2379986 8 - 204787373 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=6686.000000 s hg38.chr3_KI270934v1_alt 95847 3 + 163458 CGC s panTro5.chr3 2568753 3 - 202621043 CGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 156875 3 - 190779 CGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 42055 3 - 106623 CGC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2379994 3 - 204787373 CAC i rheMac8.chr2 I 8 C 0 s macFas5.chr2 192446269 3 - 192460366 CAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19185279 3 - 19675229 CAC i macNem1.NW_012014355v1 I 8 C 0 s cerAty1.NW_012004056v1 16426056 3 - 16847902 CAC i cerAty1.NW_012004056v1 I 8 C 0 s chlSab2.chr15 91390994 3 + 91754291 CAC i chlSab2.chr15 I 8 C 0 s manLeu1.NW_012102020v1 1463301 3 + 1977891 CAC i manLeu1.NW_012102020v1 I 8 C 0 s colAng1.NW_012118932v1 7397824 3 - 7796314 CGC i colAng1.NW_012118932v1 I 8 C 0 s calJac3.chr17 73897636 3 + 74750902 AGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17328997 2 - 17725628 AG- i saiBol1.JH378146 C 0 C 0 e dasNov3.JH569502 2737483 691 - 6579706 I e cebCap1.NW_016107444v1 6424756 128 + 6778120 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=80413.000000 s hg38.chr3_KI270934v1_alt 95850 20 + 163458 GTGGCCTCGTCTCTGCCTCT- s panTro5.chr3 2568756 20 - 202621043 GTGGCCTTGTCTGTGCCTCT- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 156878 20 - 190779 GTGGCCTCGTCTGTGCCTCT- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 42058 20 - 106623 GTGGCCTCGTCTGTGCCTCT- i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2379997 19 - 204787373 GTGGCCTAGTCTGTGCCTC-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192446272 19 - 192460366 GTGGCCTAGTCTGTGCCTC-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19185282 19 - 19675229 GTGGCCTAGTCTGTGCCTC-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16426059 19 - 16847902 GTGGCCTAGTCGGTGCCTC-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91390997 19 + 91754291 GTGGCCTAGTCTGGGCCTC-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1463304 19 + 1977891 GTGGCCTAGTCTGTGCCTC-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7397827 19 - 7796314 ATGGCCTAGGCTGTGCCTC-- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73897639 13 + 74750902 CTGACCTAA------TCTT-- i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 17328999 19 - 17725628 CTGACCTCATCTGTGTCTT-- i saiBol1.JH378146 C 0 I 1 s dasNov3.JH569502 2738174 20 - 6579706 GTGAACTAATCTGTCTCTT-T i dasNov3.JH569502 I 691 C 0 e cebCap1.NW_016107444v1 6424756 128 + 6778120 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=261275.000000 s hg38.chr3_KI270934v1_alt 95870 35 + 163458 GTGCATTTTCCCCCAGCAGGTC-AGCAGTGTGAAAG s panTro5.chr3 2568776 35 - 202621043 GTGCATTTTCCCCCAGCAGGTC-AGCAGTGTGAAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 156898 35 - 190779 GTGCATTTTCCCCCAGCAGGTC-AGCGGTGTGAAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 42078 35 - 106623 GTGCATTTTCCCCCAGCAGGTC-AGCGGTGTGAAAG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2380016 34 - 204787373 -TGCGTTTTCCTCCAGCTGGTC-AGTGGTGTGAAAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192446291 34 - 192460366 -TGCGTTTTCCTCCAGCTGGTC-AGTGGTGTGAAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19185301 34 - 19675229 -TGCGTTTTCCTCCAGCTGGTC-AGTGGTGTGAAAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16426078 34 - 16847902 -TGCGTTTTCCTCCAGCTGGTC-AGTGGTGTGAAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91391016 34 + 91754291 -TGCGTTTTCCTCCAGCTGGTC-AGTGGTGTGAAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1463323 34 + 1977891 -TGCGTTTTCCTCCAGCTGGTC-AGTGGTGTGAAAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7397846 34 - 7796314 -TGCATTTTCCTCCAGCTGGTC-AGTGGTGTGAAAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73897653 35 + 74750902 GTGCGTTTTTCTCCAGCAGGTC-AGCGGTGTGAGAG i calJac3.chr17 I 1 I 1 s saiBol1.JH378146 17329019 35 - 17725628 GTGCGTTTTTCTCCAGCAGGTC-AGCCGTGTGAACG i saiBol1.JH378146 I 1 I 1 s cebCap1.NW_016107444v1 6424884 35 + 6778120 GTGCATTTTTCTCCAGCAGGTC-AGCAGTGTGAAAG i cebCap1.NW_016107444v1 I 128 I 14 s dasNov3.JH569502 2738194 36 - 6579706 GTGCATATTTCTATAGTATCCCAAGTGTAGTGCAAG i dasNov3.JH569502 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I a score=238762.000000 s hg38.chr3_KI270934v1_alt 95905 38 + 163458 GCGG-GGGTTCTAGTAGGTCTCACAGGGAGACAATGCAG s panTro5.chr3 2568811 38 - 202621043 GTGG-GGGTTCTAGTAGGTCTCACAGGGAGACAATGCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 156933 38 - 190779 GTGG-GGGTTCTAGTAGGTCTCACAGGGAGACAATGCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 42113 38 - 106623 GTGG-GGGTTCTAGTAGGTCTCACAGGGAGACAATGCAG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2380050 39 - 204787373 GTGGGGGGTTCCAGTAGGTCTCACAGGGAGACAAGGCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192446325 39 - 192460366 GTGGGGGGTTCCAGTAGGTCTCACAGGGAGACAAGGCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19185335 39 - 19675229 GTGGGGGGTTCCAGTAGGTCTCACAGGGAGACAAGGCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16426112 39 - 16847902 GTGGGGGGTTCCAGTAGGTCTCACAGGGAGACAAGGCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91391050 39 + 91754291 GTGGGGGGTTCCAGCAGGTCTCACAGGGAGACAAGGCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1463357 39 + 1977891 GCGGGGGGTTCCAGTAGGTCTCACAGGGAGACAAGGCAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7397880 39 - 7796314 GTGGTGGGTTCCAGTAGGTCTCACAGGGAGACGATGCAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73897689 39 + 74750902 TTGTGGGTTTCTAGAAGGTCTGACAGGGAGACAGTGCAG i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17329055 39 - 17725628 TTGTGGGTTTCTAGAAGGTCTGACCTGGAGACAGTGCAC i saiBol1.JH378146 I 1 C 0 s dasNov3.JH569502 2738230 39 - 6579706 TTAGGGGTTTCTTGTAGGTCTGACAAAGGTATAAGGCAG i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 6424919 14 + 6778120 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=878586.000000 s hg38.chr3_KI270934v1_alt 95943 127 + 163458 GAAGGGGCT----GAGAATTGCAAGTGAGAGGTTATTGGTAGGACGGAC-AATGCAGGAGCTGGATGGACT---GCACGGACTGAGCGATCGCCACCGAGAGATATTTGGGGTA--ccctgccccagtccc------cagccc s panTro5.chr3 2568849 127 - 202621043 GAAGGGGCT----GAGAATAGCAAGTGAGAGGTTATTGGTAGGACGGAC-AATGCAGGAGCTGGATGGACT---GCACGGACTGAGCGATCGCCACCGAGAGATATTTGGGGTA--ccctgccccagtccc------cagccc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 156971 127 - 190779 GAAGGGGCT----GAGAATAGCAAGTGAGAGGTTATTGGTAGGACGGAC-AATGCAGGAGCTGGATGGACT---GCACGGACTGAGCGATCGCCACCGAGAGATATTTGGGGTA--ccctgccccagtccc------cagccc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 42151 119 - 106623 GAAGGGGCT----GAGAATAGCAAGTGAGAGGTTATTGGTAGGACGGAC-AATGCAGGAGCTGGATGGACT---GCACGGACTGAGCGATCGCCACCGAGAGATATTTGGGGTA--CCCTG--------CC------CAGTCC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2380089 121 - 204787373 GAAGGGGCT----GAGAATAGCAAGTGAGAGGTTATTGGTAGGACGGAC-AATGCAGGAGCTGGATGGACT---GGAGGGGCTGAGCGATCGCCACCCAGAGATATTTGGGGTA--CCCTTCCCCAGTCCC------------ i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192446364 121 - 192460366 GAAGGGGCT----GAGAATAGCAAGTGAGAGGTTATTGGTAGGACGGAC-AATGCAGGAGCTGGATGGACT---GGAGGGGCTGAGCGATCGCCACCCAGAGATATTTGGGGTA--CCCTTCCCCAGTCCC------------ i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19185374 121 - 19675229 GAAGGGGCT----GAGAATAGCAAGTGAGAGGTTATTGGTAGGACGGAC-AATGCAGGAGCTGGATGGACT---GGAGGGGCTGAGCGATCGCCACCCAGAGATATTTGGGGTA--CCCTTCCCCAGTCCC------------ i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16426151 121 - 16847902 GAAGGGGCT----GAGAATAGCAAGTAAGAGGTTATTGGTAGGACGGAC-AATGCAGGAGCTGGATGGACT---GGAGGGGCTGAGCGATCGCCACCCAGAGATATTTGGGGTA--CCCTTCCCCCGTCCC------------ i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91391089 121 + 91754291 GAAGGGGCT----GAGAATAGCAAGTGAGAGGGTATTGGTAGGACGGAC-AATGCAGGAGCTGGATGGACT---GGAGGGGCTGAGCGATCGCCACCCAGAGATATTTGGGGTA--CCCTTCCCCAGTCCC------------ i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1463396 121 + 1977891 GAAGGGGCT----GAGAATAGCAAGTGAGAGGTTATTGGTAGGACGGAC-AATGCAGGAGCTGGATGGACT---GGAGGGGCTGAGCGATCGCCACCCAGAGATATTTGGGGTA--CCCTTCCCCAGTCCC------------ i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7397919 114 - 7796314 GAAGGGGCT----G-------------AGAGGTTATTGGTCGGACGGAC-AATGCAGGAGCTGGATGGACT---GGAGGGGCTGAGCGATCGCCACCCAGAGATATTTGGGGTA--CCCTTCCCCAGTCCCCAGCCC------ i colAng1.NW_012118932v1 C 0 M 1573 s calJac3.chr17 73897728 126 + 74750902 GAAGGGGCT----GAGAATAGCAAGCGAGAAGTTATTGGTAGGATGGAC-AATGCAGGAGCTGGATGGATT---GGAGGGGCTGAGTGATCACCACTGAGAGATATTTGGGGTA--CCCAGCCCCAA-CCC------CAGCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17329094 127 - 17725628 GAAGGGGCT----GAGACTCGCAATTGAGAGGTTATTGGCAGGATGGAC-AATGCAGGAGCTGGATGGACT---GGAGGGGCTGAGTGATCTGCACTGAGAGATATTTGGGGTA--CCCAGCCCCAATCCC------CAGCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6424933 127 + 6778120 GAAGGGGCT----GAGAATCGCAAGCCAGAGGTTATTGGCAGGATGGAC-AACACAGGAGCTGGATGGACT---GGAGGGGCTGAGTGATCGCCACTGAGAGATATTTGGGGTA--CCCAGCCCCAATCCC------CAGCCC i cebCap1.NW_016107444v1 I 14 C 0 s dasNov3.JH569502 2738269 131 - 6579706 GAAGGGGCTTGAGGATAATGCCAAGTGAGTGGCTGACAGGAGAGCATGCAAATAACTGGACAGGAAAGATTCAGGAGGGGACTGCAGGACAACTACAGATATATTATTAGCGTACGCCTCGCTCCGGGGGC------------ i dasNov3.JH569502 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I a score=449408.000000 s hg38.chr3_KI270934v1_alt 96070 91 + 163458 tcagcccccgacccaCCATGGGAGGTGGGAGCAGCGGGCAGGCCGGTTGGGGG-CCAGATACCCAGGCAGTGGG-ATGTGCAGTG-GGAGGGGT s panTro5.chr3 2568976 91 - 202621043 ccagcccccgacccaCCATGGGAGGTGGGAGCAGCGGGCAGGCCGGTTGGGGG-CCAGATACCCAGGCAGTGGG-ATGTGCAGTG-GGAGGGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 157098 91 - 190779 ccagcccctgacccaCCATGGGAGGTGGGAGCAGCGGGCAGGCCGGTTGGGGG-CCAGATACCCAGGCAGTGGG-ATGTGCAGTG-GGAGGGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 42270 91 - 106623 CCAGCCCCCGACCCACCATGGGAGGTGGGAGCAGCGGGCAGGCCGGTTGGGGG-CCAGATACCCAGGCAGTGGG-ATGTGCAGCG-GGAGGGGT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2380210 90 - 204787373 -CAGCCCCCGACCCTCCACGGGAGGCAGGAGCAGCGGGCGGGCCTGCGGGGGG-CCAGGTGCCCAAGCAGTGGG-ATGTGCAGCG-GGAGTGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192446485 90 - 192460366 -CAGCCCCCGACCCTCCACGGGAGGCGGGAGCAGCGGGCGGGCCTGCAGGGGG-CCAGGTGCCCAAGCAGTGGG-ATGTGCAGCG-GGAGGGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19185495 90 - 19675229 -CAGCCCCCGACCCTCCACGGGAGGCGGGAGCAGCGGGCGGGCCTGCGGGGGG-CCAGGTGCCCAAGCAGTGGG-ATGTGCAGCG-GGAGGGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16426272 90 - 16847902 -CAGCCCCCGACCCTCCgcgggaggcgggggcagcgggcgggcctgcgggggg-cCAGGTGCCCAAGCAGTGGG-ATGTGCAGCG-GGAGGGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91391210 90 + 91754291 -CAGCCCCCGACCCTCCACGGGAGGCGGGAGCAGCGGGCGGGCCTGCCGGGGG-CCAGACGCCCAGGCAGTGGG-ATGTGGAGTG-GGAGGGGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1463517 90 + 1977891 -CAGCCCCCAACCCTCCGCGGGAGAAGGGAGCAGCGGGCGGGCCTGCGGGGGG-CCAGGTGCCCAAGCAGTGGG-ATGTGCAGCG-GGAGGGGT i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73897854 81 + 74750902 --------C--GCCATCCCAGGAGGTGGGAGCAGCAGGTGGGCCTGAGGGGAGCCTGGGCGCCCAGGCGGTGGA-ATGTG-AGCG-TGAAGGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17329221 84 - 17725628 --------CAAACCATCACAGGGGACGGGAGCAGCAGGTGGGCCTGCGGGGAGCACGGGTGCCCAGGCGGTGGG-ATGTGCAGCG-CCAAGGCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6425060 72 + 6778120 --------CGAACCATCACAGGGGGCGGGAGCAGCAGGTGGGCCTGCGGGGAG---------CCAGGTGGTGGG-ATGTGCAG----GAAGGCT i cebCap1.NW_016107444v1 C 0 C 0 s dasNov3.JH569502 2738400 73 - 6579706 GCAGCATTGGCCTCCCGGCGGGAAACCCTAGGAGCGCGC---------------CC------CCAGGCGGCGGGAAGGTGCAGCGCGGAGGGGT i dasNov3.JH569502 C 0 N 0 e colAng1.NW_012118932v1 7398033 1573 - 7796314 M e nomLeu3.chr11 2883701 10 - 123690457 I a score=682241.000000 s hg38.chr3_KI270934v1_alt 96161 128 + 163458 CTCCGC-CCCTGCCCCGGGTC--CCCACTGGCCCCTCCGCCGCCGACCGGC--CCCCCCGCGGCATCCCAGAGCCGACCCAGGCCCAACTAGAGGAATGGCTGCAGAGCTGGGATCCTAATGACACAGGACAG s panTro5.chr3 2569067 127 - 202621043 CTCCGC-CCCTGCCCCGGGTC--CCCACTGGCCCCTCTGCCGCCCACTGGT--CCCCC-GCGGCATCCCAGAGCCGACCCAGGCCCAACTAGAGGAATGGCTGCAGAGCTGGGATCCTAATGACACAGGACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 157189 127 - 190779 CTCCGC-CCCTGCCCCGGGTC--CCCACTGGCCCCTCTGCCGCCCACTGGT--CCCCC-GCGGCATCCCAGAGCCGACCCAGGCCCAACTAGAGGAATGGCTGCAGAGCTGGGATCCTAATGACACAGGACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 42361 127 - 106623 CTCCGC-CCCTGCCCCGGGTC--CCCACTGGCCCCTCCGCCGCCCACCGGC--CCCGC-GCGGCATCCCAGAGCCGACCCAGGTGCAACTAGAGGAATGGCTGCAGAGCTGGGATCCTAATGACACAGGACAG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2380300 125 - 204787373 CTCTGC-CTTGGCCCCAGGGC--CCCACTGGCCCCTCCGCAGCCTACCGGC--CCC---GCGGCATCCCAGAGCCGACCCAGGCCCAACTAGAGGAATGGCTGCAGAGCTGGGATCCTAATGACACAGGGCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192446575 125 - 192460366 CTCTGC-CTTGGCCCCAGGGC--CCCACTGGCCCCTCCGCAGCCTACCGGC--CCC---GCGGCATCCCAGAGCCGACCCAGGCCCAACTAGAGGAATGGCTGCAGAGCTGGGATCCTAATGACACAGGGCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19185585 125 - 19675229 CTCTGC-CTTGGCCCCAGGGC--CCCACTGGCCCCTCCGCAGCCTACCGGC--CCC---GCGGCATCCCAGAGCCGACCCAGGCCCAACTAGAGGAATGGCTGCAGAGCTGGGATCCTAATGACACAGGGCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16426362 125 - 16847902 CTCTGC-CCTGGCCTCAGGGC--CCCACTGGCCCCTCCGCAGCCTACCGGC--CCC---GCGGCATCCCAGAGCCGACCCAGGCCCAACTAGAGGAATGGCTGCAGAGCTGGGATCCTAATGACACAGGGCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91391300 127 + 91754291 CTCCGC-TCTGGCCCCTCCGCAGCCCACCGGCCCCTCCGCAGCCCACCGGC--CCC---GCGGCATCCCAGAGCTGACCCAGGCCCAACTAGAGGAATGGCTGCGGAGCTGGGATCCTAATGACACAGGGCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1463607 125 + 1977891 CTCTGC-CCTGGCCCCAGGGC--CCCACTGGCCCCTCCGCAGCCTACCGGC--CCC---GCGGCATCCCAGAGCCGACCCAGGCCCAACTAGAGGAATGGCTGCAGAGCTGGGATCCTAATGACACAGGGCAG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73897935 121 + 74750902 CTCCGCGCCCCGCCCTGGGTC--CCCACCGGTGCCTCTGCCACCCACCAGCTGGCC---TTGGCATCCCAAA------CCAGGCCTAA-TAGAGGAAGGGCTGCAGAGTTGGGATCCCACTGACACAGGATGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17329305 120 - 17725628 CTCTGCGCCCAGCCCCAGGTC--CCCACCAGCGCCTCTGCCGCCCACCGGCT-GCC---TTGGCATCCCAGA------CCAGGCCTGT-TAGAGGAAGGGCTGCAGAGCTGGGATCCCACTGACACAGGACGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6425132 119 + 6778120 CTCCGCGCCCCGCCTTGGGTC--CCCACCAGCGCCTCTGCCACCCACCGGT--GCC---TTGGCATCCCAAA------CCAGGCCTAA-TAGAGGAAGGACTGCAGAGCTGGGATCCCACTGACGCAGGACGG i cebCap1.NW_016107444v1 C 0 I 15 e colAng1.NW_012118932v1 7398033 1573 - 7796314 M e nomLeu3.chr11 2883701 10 - 123690457 I a score=83106.000000 s hg38.chr3_KI270934v1_alt 96289 22 + 163458 TGGTGGAGCGTTAAGAGCTCGG s panTro5.chr3 2569194 22 - 202621043 TGGTGGAGCGTTAAGAGCTCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 157316 22 - 190779 TGGTGGAGCGTTAAGAGCTCGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 42488 22 - 106623 TGGTGGAGCGTTAAGAGCTCGG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2380425 22 - 204787373 TGGTGGAGCATTAAGAGTTCGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192446700 22 - 192460366 TGGTGGAGCATTAAGAGTTCGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19185710 22 - 19675229 TGGTGGAGCATTAAGAGTTCGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16426487 22 - 16847902 TGGTGGAGCATTAAGAGTTCGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91391427 22 + 91754291 TGGTGGAGAATTAAGAGTTCGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1463732 22 + 1977891 TGGTGGAGCATTAAGAGTTCGG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73898056 18 + 74750902 -GGTGGAGCTCTAAG-GCAC-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17329425 18 - 17725628 -GGCTAGGCTCTACG-GCAC-- i saiBol1.JH378146 C 0 C 0 e cebCap1.NW_016107444v1 6425251 15 + 6778120 I e colAng1.NW_012118932v1 7398033 1573 - 7796314 M e nomLeu3.chr11 2883701 10 - 123690457 I a score=3467838.000000 s hg38.chr3_KI270934v1_alt 96311 576 + 163458 TGGTAAACGTGCACTGAAATACAGTCAtgctgtgcagaagctctctagtttcattagataccttttgtcaattttggcttttgttgccatttcttttggtgttttagtcatgaa-gtctttgcccatgcttacgtcctcaat-ggtgttgcctaggttttcttctaggatttttctggttttaggtctcacgtttaaatctttaatgcatcttgagttaatttttgtataag-tgtcagcaaggggtctagtttcggttttct---------gcatatgaccaggcagagtgaacaggcaacctacagaatggaagaaaatttttgcaatctatccatccgacaaagggctaatatccagaatttacaaggaacttaagtaaatttacaag-----aacaaacaaccccatcagaaagtgtgcaaaggatatgaacagacacttctc-----aagacatttatgcagccaacaaac--at--gaaaaaaa-ctcatcgtcactgatcattagagaaatgcaaatcaaaaccacaatgagatatcatctcacaccagttagaatggtgatcattaaaaagtcaggaaacaacagatgctgga------ga s panTro5.chr3 2569216 581 - 202621043 TGGTAAACGTGCACTGAAATACAGTCAtgctgtgcagaagctctctagtttcattagataccttttgtcaattttggcttttgttgccattccttttggtgttttagtcatgaaagtctttgcccatgcttatgtcctcaat-ggtattgcctaggttttcttctaggatttttctggttttaggtctcacgtttaaatctttaatgcatcttgagttaatttttatataaggtgtcagaaaggggtctagtttcggttttct---------gcatatgaccagccagagtgaacaggcaacctacagaatggaaaaaaatttttgcaatctatccatccaacaaagggctggtatccagaatttacaaggaacttaagtaaatttacaag-----aacaaacaaccccgtcagaaagtgtgcaaaggatatgaacagacacttctc-----aagacatttatgcagccaacaaac--atacgaaaaaaagctcatcgtcactgatcattagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttagaatggtgatcattaaaaagtcaggaaacaacagatgctgga------ga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 157338 580 - 190779 TGGTAAACGTGCACTGAAATACAGTCAtgctgtgcagaagctctgtagtttcattagataccttttgtcaattttggcttttgttgccattccttttggtgttttagtcatgaa-gtctttgcccatgcttatgtcctcaat-ggtattgcctaggttttcttctaggatttttctggttttaggtctcacgtttaaatctttaatgcatcttgagttaatttttatataaggtgtcaggaaggggtctagtttcggttttct---------gcatatgaccagccagagtgaacaggcaacctacagaatggaagaaaatttttgcaatctatccatccaacaaagggctgatatccagaatttacaaggaacttaagtaaatttacaag-----aacaaacaaccccatcagaaagtgtgcaaaggatatgaacagacacttctc-----aagacatttatgcagccaacaaac--atacgaaaaaaagctcatcgtcactgatcattagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttagaatggtgatcattaaaaagtcacgaaacaacagatgctgga------ga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 42510 580 - 106623 TGGTAAACGTGCACTGAAATACAGTCAtgttgtgcagaagctctctagtttcatcagataccttttgtcaattttggcttttgttgccattccttttggtgttttagtcacgaa-gtctttgcccatgcttatgtcctcaat-ggtattgcctaggttttcttctaggagttttctggttttaggtctcacgtttaaatctttaatgcatcttgagttaatttttgtataaggtgtcaggaaggggtctagtttcagttttct---------gcatatgaccagccagagtgaacaggcaacctacagaatggaagaaaatttttgcaatctatccatccgacaaagggctaatatccagaatttacaaggaacttaagtaaatttacaag-----aacaaacaaccccatcagaaagtgtgcaaaggatatgaacagacacttctc-----aagacatttatgcagccaacaaac--atacgaaaaaaagctcattgtcactgatcattagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttagaatggtgatcattaaaaagtcaggaaacaacagatgctgga------ga i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2380447 577 - 204787373 TGGTAAACATGCACTGCAATACAGTCAtgctgtgcagaagctctttagtgtaattagatcccttttgtcagttttggcttttgttgccattgcttttggtgttttagtcatgaa-gtctttgcccatgcctatgtcctgagt-ggtattgcctaggttttcttctagggtttttctggttttaggtcttacgtttaagtctgtaatccatc-----ttaatttttgtatgaggtgtcaggaaggggtccagtttcagttttcc---------gcataagactagccagagtgaacaggt-acctacagaatgggagaaaatttttacaatctatccatctgacaaagggctaatatccagaatttacaaggaacctaagtaaatttacaagaagaaaacaaacaatcccatcagaaagtgtgcaaagcatatgaacagacacttctc-----aagacatttatgcagccaacaaac--at--gaaaaaaagctcatcatcactgatcattagagaaacgcaaatcacaaccacaatgagataccatctcactccaggtagaatggtgatcattataaagtcaggaaacaacaagtgctgga------ga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192446722 577 - 192460366 TGGTAAACATGCACTGAAATACAGTCAtgctgtgcagaagctctttagtgtaattagatcccttttgtcagttttggcttttgttgccattgcttttggtgttttagtcatgaa-gtctttgcccatgcctatgtcctgagt-ggtattgcctaggttttcttctagggtttttctggttttaggtctaacgtttaagtctgtaatccatc-----ttaatttttgtatgaggtgtcaggaaggggtccagtttcagttttcc---------gcataagactagccagagtgaacaggt-acctacagaatgggagaaaatttttacaatctatccatctgacaaagggctaatatccagaatttacaaggaacttaagtaaatttacaagaagaaaacaaacaatcccatcagaaagtgtgcaaagcatatgaacagacacttctc-----aagacatttatgcagccaacaaac--at--gaaaaaaagctcatcatcactgatcattagagaaacgcaaatcacaaccataatgagataccatctcactccaggtagaatggtgatcattataaagtcaggaaacaacaagtgctgca------ga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19185732 592 - 19675229 TGGTAAACATGCACTGAAATACAGTCAtgctgtgcagaagctctttagtgtaattagatcccttttgtcagttttggcttttgttgccattgcttttggtgttttagtcatgaa-gtctttgcccatgcctatgtcctgagt-ggtattgcctaggttttcttctagggtttttctggttttaggtcttacgtttaagtctgtaatccatc-----ttaatttttgtatgaggtgtcaggaaggggtccagtttcagttttccgcataactggcataagactagccagagtgaacaggt-acctacagaatgggagaaaatttttacaatctatccatctgacaaagggctaatatccagaatttacaaggaacttaagtaaatttacaagaagaaaacaaacaatcccatcagaaagtgtgcaaagcatatgaacagacacttctc-----aagacatttatgcagccaacaaac--at--gaaaaaaagctcatcatcactgatcattagagaaacacaaatcacaaccataatgagataccatctcactccaggtagaatgatgatcattataaagtcaggaaacaacaagtgctggagcgggcga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16426509 578 - 16847902 TGGTAAACATGCACTGAAATACAGTCAtgctgtgcagaagctctttagtgtaattagatcccttttgtcagttttggcttttgttgccattgcttttggtgttttagtcatgaa-gtctttgcccatgcctatgtcctgagt-ggtattgcctaggttttcttctagggtttttctggttttaggtcttacgtttaagtctgtaatccatc-----ttaatttttgtatgaggtgtcaggaaggggtccagtttcagttttct---------gcataagactagccagagtgaacaggtaacctacagaatgggagaaaatttttacaatctatccatctgacaaagggctaatatccagaatttacaaggaacttaagtaaatttacaagaagaaaacaaacaatcccatcagaaagtgtgcaaagcatatgaacagacacttctc-----aagacatttatgcagccaacaaac--at--gaaaaaaagctcatcatcactgatcattagagaaacgcaaatcacaaccacaatgagataccatctcactccaggtagaatggtgatcattataaagtcaggaaacaacaagtgctgga------gg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91391449 585 + 91754291 TGGTAAACATGCATTGAAATACAGTCAtgctgtgcagaagctctttagtgtaattagatcccttttgtgagttttggcttttgttaccattgcttttggtgttttagtcatgaa-gtctttgcccatgcctatgtcctgagt-ggtattgcctaggttttcttctagagtttttctggttttaggtcttatgtttaagtttttaatccatcttgagttaatttttgtataaggtgtcaggaaggggtctagtttcagttttct---------gcataagaccagccagagtgaacaggcaacctacagaatgggagaaaatttttacaatctatccatctgacaaagggctaatatccagaatttataaggagcttaagtaaatttacaagaagaaaacaaacaatcccatcagaaagtgtgcaaagcatatgaacagacacttctc-----aacacatttatgcagccaacaaacatat--gaacagaagctcatcatcactgatcattagagaaacgcaaatcaaaaccacaatgagttaccatctcacaccaggtagaatggtgatcattaaaaagtcaggaaacaacaggtgctgga------ga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1463754 578 + 1977891 TGGTAAACATGCACTGAAATACAGTCAtgctgtgcagaagctctttagtgtaattagatcccttttgtcagttttggcttttgttgccattgctttcggtgttttagtcatgaa-gtctttgcccatgcctatgtcctgagt-ggtattgcctaggttttcttctagggtttttctggttttaggtcttacgtttaagtctgtaatccatc-----ttaatttttgtatgaggtgtcaggaaggggtccagtttcagttttct---------gcataagactagccagagtgaacaggtaacctacagaatgggagaaaatttttacaatccatccatctgacaaagggctaatatccagaatttacaaggaacttaagtaaatttacaagaagaaaacaaacaatcccatcagaaagtgtgcaaagcatatgaacagacacttctc-----aagacatttatgcagccaacaaac--at--gaaaaaaagctcatcatcactgatcattagagaaacgcaaatcacaaccacaatgagataccatctcactccaggtagaatggtgatcattataaagtcaggaaacaacaagtgctgga------ga i manLeu1.NW_012102020v1 C 0 I 352 s calJac3.chr17 73898074 565 + 74750902 TGGTAAATGTGCACTGAAATATAGTCATGC--------agctcttgagtttaattaga-------------ttttggcttttgatgccattgcttttggtgttttagtcatgaa-gtctttgcccatgcctacgtcctgaat-ggtattgcctagcttttcttctaggatttttgtggttttaggtcttacgtttaaatctttaatccatcttgagttaatttttgtataaggtgtaagaaagggatctagtttcagttttct---------gcatatgactagccagagtgaacaggcaacctacagaatgatagaaaac--ttgcagtctatccatctgacaaaggtctaatatccagaatctacaaggaacttaaacaaatttacaagaaaaaaacaaacgatcccatcagaaagtgggcaaaggatatgaacagacacctttcaaaagaagacatttatgcagccaacaaac--atatgaagaaaagctcatcatcactggtcattagagaaatgcaaatcacaactcccgtgagataccatctcgcgccagttagaatggcaatgatt--aaagtcgggaaacaacagatgctgga------ga i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17329443 563 - 17725628 TGGTAAACGGGCACTGAAACACAGTCATGC--------Ggctcttgagtttaataaga-------------ttttggtttttgttgccattgcttttggtgttttagtcatgaa-gtctttgcccgtgcctatgtcctgaat-ggtattgcctaggttttctcctaggatttttatggttttaggtcttacgtttaaatctttaatccatcttgagttaatttttgtataaggtgtaaggaaggggtctagtttcagttttct---------gcatatgactagccacagtgaacaggcaacctgcagaatgatagaaaacttttgcaatctatccatctgacaaagatctgatatccagaatctacaaggaacttaaacaaatttacaagaaaaaaaca----accccatcagaaagtgggcaaaggatatgaacagacactttacaaaagaagacatttatgcagccaacaaac--ataggaagaaaagctcatcgtcactgttcattagacaaatgcaagtcagaactacggtgagacaccatctcgagccagttagaacggcagttatt--aaagttgggaaacaacagatgctgga------ga i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6425266 559 + 6778120 TGGTAATCGTGCACTGAAATACAGTCATGC--------agctcttaagtttaatttga-------------ttttggcttttgttgcaattgcttttgctgttttagtcatgaa-gtctttgcccatgcctatgtcctgaatgggtattgcctaggttttcttctaggatttttatggttttaggtc-----tttaaatctttaatccatcttgtgttaatttttgtataaggtgtaaggaaaggatccagtttcagttttct---------gcatatgactggccagagtgaacaggcaacctacagaatgatagaaaacttttgcaatctatccatcggacaaaggtctaatatccagaatctacaaggaacttaaacaaattcacaagaaaaaaaca----accccatcagaaagtgggcaaaggatatgaacagacacctttcaaaagaagacatttatgcagccaacaaac--atacgaagaaaagctcatcatcactggtcattagagaaatgcaaatcagaactacggtgagataccatctcgagccagttagaatggccatcatt--aaagtcgcgaaacaacagatgctggc------ca i cebCap1.NW_016107444v1 I 15 C 0 e colAng1.NW_012118932v1 7398033 1573 - 7796314 M e nomLeu3.chr11 2883701 10 - 123690457 I a score=72294.000000 s hg38.chr3_KI270934v1_alt 96887 12 + 163458 ggatgtagagaa s panTro5.chr3 2569797 12 - 202621043 ggatgtagagaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 157918 12 - 190779 ggatgtagagaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 43090 12 - 106623 ggatgtagagaa i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2381024 12 - 204787373 ggatgtggagaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192447299 12 - 192460366 ggatgtggagga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19186324 11 - 19675229 ggatgtgagaa- i macNem1.NW_012014355v1 C 0 I 41 s cerAty1.NW_012004056v1 16427087 12 - 16847902 ggatgtggagaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91392034 12 + 91754291 ggatgtggagaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1464684 12 + 1977891 ggatgtggagaa i manLeu1.NW_012102020v1 I 352 C 0 s calJac3.chr17 73898639 12 + 74750902 ggatgtggagaa i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17330006 12 - 17725628 ggatgtggagaa i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6425825 12 + 6778120 ggatgtggagaa i cebCap1.NW_016107444v1 C 0 C 0 e colAng1.NW_012118932v1 7398033 1573 - 7796314 M e nomLeu3.chr11 2883701 10 - 123690457 I a score=178066.000000 s hg38.chr3_KI270934v1_alt 96899 33 + 163458 ataggaatagttttacactgttggtgggagtgc s panTro5.chr3 2569809 33 - 202621043 ataggaacatttttacactgttggtgggagtgc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 157930 33 - 190779 ataggaacatttttacactgttggtgggagtgc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 43102 33 - 106623 ataggaacatttttacactgttggtgggagtgc i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2381036 33 - 204787373 acaggaacacttttacactgttggtgggactgt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192447311 33 - 192460366 acaggaacacttttacactgttggtgggactgt i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 16427099 33 - 16847902 ataggaacacttttacactgttggtgggactgt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91392046 33 + 91754291 ataggaacacttttacactgttggtgggactgt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1464696 33 + 1977891 ataggaacacttttacactgttggtgggactgt i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73898651 33 + 74750902 atagaaacgcttttacactgctggtgggagtgt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17330018 33 - 17725628 acaggaacacttttacactgttggtgggagtgt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6425837 33 + 6778120 ataggaatgcttttacactgttggtgggagtgt i cebCap1.NW_016107444v1 C 0 C 0 e macNem1.NW_012014355v1 19186335 41 - 19675229 I e colAng1.NW_012118932v1 7398033 1573 - 7796314 M e nomLeu3.chr11 2883701 10 - 123690457 I a score=88479.000000 s hg38.chr3_KI270934v1_alt 96932 14 + 163458 aaattagttcaacc s panTro5.chr3 2569842 14 - 202621043 aaattagttcaacc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 157963 14 - 190779 aaattagttcaacc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 43135 14 - 106623 aaattagttcaacc i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2381069 14 - 204787373 aaactagttcaacc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192447344 14 - 192460366 aaactagttcaacc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19186376 13 - 19675229 aaactag-tcaacc i macNem1.NW_012014355v1 I 41 C 0 s cerAty1.NW_012004056v1 16427132 14 - 16847902 aaactagttcaacc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91392079 14 + 91754291 aaactagttcaacc i chlSab2.chr15 C 0 I 82 s manLeu1.NW_012102020v1 1464729 14 + 1977891 aaactagttcaacc i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73898684 14 + 74750902 aaattagttcaccc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17330051 14 - 17725628 aaattagttcaacc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 6425870 14 + 6778120 aaattagttcaacc i cebCap1.NW_016107444v1 C 0 C 0 e colAng1.NW_012118932v1 7398033 1573 - 7796314 M e nomLeu3.chr11 2883701 10 - 123690457 I a score=708516.000000 s hg38.chr3_KI270934v1_alt 96946 139 + 163458 attgtg-gaagacagtgtggcga-ttcctcaaggatctagaactaga-aataccatttgacccagccatcccattactg-ggtatatacccaaaggattataaatcattctactgtaaagacacatgcacacgtatgtttatt s panTro5.chr3 2569856 139 - 202621043 attgtg-gaagacagtgtggcga-ttcctcaaggatctagaactaga-aataccatttgacccagccatcccattactg-ggtatatacccaaaggattataactcattctactgtaaagacacatgcacacgtatgtttatt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 157977 139 - 190779 attgtg-gaagacagtgtggcaa-ttcctcaaggatctagaactaga-aataccatttgacccagccatcccattactg-ggtatatacccaaaggattataaatcattctactgtaaagacacatgcacacgtatgtttatt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 43149 139 - 106623 attgtg-gaagacagtgtggcga-ttcctcaaggatctagaactaga-aacaccatttgacccagccatcccattactg-ggtatatacccaaaggattataaatcattctactgtaaagacacatgcacacgtatgtttatt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2381083 139 - 204787373 attgtg-gaagacagtgtggcga-ttcctcaaggatctagcactaga-aataccatttgacccagcaatcccattactg-ggattatgcccaaaggattataaatcatgctgctataaagacacatgcacacatacgtttgtt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192447358 139 - 192460366 attgtg-gaagacagtgtggcga-ttcctcaaggatctagcactaga-aataccatttgacccagcaatcccattactg-ggtatatgcccaaaggattataaatcatgctgctataaagacacatgcacacatacgtttgtt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19186389 141 - 19675229 attgtgtgaagacagtgtggcgatttcctcaaggatctagcactagagaataccatttgacccagcaatcccattactatggtatatgcccaaagg-ttataaatcatgctgctataaagacacatgcacac-tacgtttgtt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16427146 139 - 16847902 attgtg-gaagacagtgtggcga-ttcctcaaggatctagcactaga-aataccatttgacccagcaatcccattactg-ggtatatgcccaaaggattataaatcatgctgctataaagacacatgcacacacacgtttgtt i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1464743 139 + 1977891 attgtg-gaagacagtgtggcga-ttcctcaaggatctagcactaga-aataccatttgacccagcaatcccattactg-ggtatatgcccaaaggattataaatcatgctgctataaagacacatgcacacatacgtttgtt i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 73898698 139 + 74750902 attgtg-gaagacggtgtggaga-ctcctcaaggacctacaactaga-aacaccatttgacccagcaatcccattactg-ggtatatactcgatggattataaatcactctactgaaaggacacatgcacacatatgcttatt i calJac3.chr17 C 0 I 957 s saiBol1.JH378146 17330065 138 - 17725628 attgtg-gaagacagtgtggtga-ttcctcaaggatctaaaaccaga-agtaccatatgacccagcaatcct-ttactg-agtatgtactcgatggattataaatcactctactaaaaggacacatgcacacatatgcttatt i saiBol1.JH378146 C 0 I 812 s cebCap1.NW_016107444v1 6425884 138 + 6778120 attgtg-gaagacagtgtggtga-ttcctcaaggatctacaactaga-aatgccatttgacccagcaatcct-ttactg-ggtatacgctcgatggattataaatcactctactaaaagggcacatgcacacatatgcttatt i cebCap1.NW_016107444v1 C 0 N 0 e colAng1.NW_012118932v1 7398033 1573 - 7796314 M e chlSab2.chr15 91392093 82 + 91754291 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=11605.000000 s hg38.chr3_KI270934v1_alt 97085 17 + 163458 ta----------------------ttattt----ttgagacgg s panTro5.chr3 2569995 21 - 202621043 ta----------------------ttatttatttttgagacgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 158116 21 - 190779 ta----------------------ttatttatttttgagacgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 43288 17 - 106623 ta----------------------ttattt----ttgagacgg i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2381222 28 - 204787373 tgc------------ttatttat-ttatttatttttgatac-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192447497 32 - 192460366 tgc--------ttatttatttat-ttatttatttttgatac-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19186530 31 - 19675229 tgc---------tatttatttatattattta-ttttgatac-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16427285 40 - 16847902 tgcttatttatttatttatttat-ttatttatttttgatac-- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 1464882 32 + 1977891 tgc--------ttatttatttat-ttatttatttttggtac-- i manLeu1.NW_012102020v1 C 0 C 0 e saiBol1.JH378146 17330203 812 - 17725628 I e calJac3.chr17 73898837 957 + 74750902 I e colAng1.NW_012118932v1 7398033 1573 - 7796314 M e chlSab2.chr15 91392093 82 + 91754291 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=2432341.000000 s hg38.chr3_KI270934v1_alt 97102 675 + 163458 agtcttgctctgttgccaggctg-gagtgcagtggcacggtctc-ggctcactgcaacctccacctcccgggttcaagcgattctcttgcctcagcctcct-gagtagctggaactacaggcacacaccaccacgcccagc-taattttttgcattttac-tagagaaggggtttcaccatgttggccagaatgg-tcttgatctcctgacctcgtgatccacccgcctcagcctcccaaag-tgctgggattacaggtttgagccaccgcgcccagccccgagcacatgtatgtttattgcgg-cactattcacaatagcaaagacttggaaccaacccaaatgcccatcaatgacagactggttaa-agaaaatgt-ggcacatagacaccatggaatactatgcagccataaaaaagg-atgagttcatgtcctttgcaggatcatggatgacactggaaaccatcattctcagcaaactaacacaggaacagaaaacca-aacactgcatgttctcactcataagtggaagttgaacaatgagaacatatggacacagggagggg-aacatcacacaccggtgcctgttgggaggttgggggcaaggggagggatagcattaggagaaatacccaatgtagatgacaggttgatgggtgcagcaaaccaccatggcacatatat s panTro5.chr3 2570016 675 - 202621043 agtcttgctctgttaccaggctg-gagtgcagtggcacggtctc-ggctcactgcaacctccacctcccgggttcaagtgattctcctgcctcagcctcct-gagtagctggaactacaggcacacaccaccacgcctggt-taattttttgcattttac-tagagaaggggtttcaccatgctggccaggatgg-tcttgatctcctgacctcgtgatccacccgcctcagcctcccaaag-tgctgggattacagatttgagccaccgcgcccagccccaagcacatgtatgtttattgcag-cactattcacaatagcaaagacttggaaccaacccaaatgtccatcaatgatagactggttaa-agaaaatgt-ggcacatagacaccacggaatactatgcagccataaaaaaag-atgagttcatgtcctttgcagggacatggatgacactggaaaccatcattctcagcaaactaacacaggaacagaaaacca-aacaccacatgttctcactcataagtgggagctgaacaatgagaacatatggacacagggagggg-aacatcacacactggggcctgttgggaggttgggggcaaggggagggatagcattaggagaaatacccaatgtagatgacaggttgatgggtgcagcaaaccaccatggcacatatat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 158137 674 - 190779 agtcttgctctgttaccaggctg-gagtgcagtggcacggtctc-ggctcactgcaacctccacctcccgggttcaagtgattctcctgcctcagcctcct-gagtagctggaactacaggcacacaccaccacgcccggc-taattttttgcgttttac-tagagaaggggtttcaccatgttggccaggatgg-tcttgatctcctgacctcgtgatccacccgcctcagcctcccaaag-tgctgggattacaggtttgagccaccgcgcccagccccaagcacatttatgtttattgcag-cactattcacaatagcaaagacttggaaccaacccaaatgcccatcaatgatagactggttaa-agaaaatgt-ggcacatagacaccacggaatactatgcagccataaaaaa-g-atgagttcatgtcctttgcagggacatggatgacactggaaaccatcattctcagcaaactaacacaggaacagaaaacca-aacaccacatgttctcactcataagtgggagctgaacaatgagaacatatggacacagagagggg-aacatcacacactggtgccagttgggaggttgggggcaaggggagggatagcattaggagaaatacccaatgtagatgacaggttgatgggtgcagcaaaccaccatggcacatatat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 43305 674 - 106623 agtcttgctctgttaccaggctg-gagtgcagtggcacggtctc-ggctcactgcaacctccacctcccaggttcaagtgattctcctgcctcagcctcct-gagtagctggaactacaggcacacaccaccacgcccggc-taattttttgcattttac-tagagaaggggtttcaccatgttggccaggatgg-tcttgatctcctgacctcgtgatccacctgcctcagcctcccaaag-tgctgggattacaggcttgagccaccgcacccagccccgagcacatgtatgtttattgtgg-cactattcacaatagcaaagacttggaaccaacccaaatgcccatcaatgatagactggttaa-agaaaatgt-ggcacatagacaccacggaatactatgcagccataaaaaagg-atgagttaatgtcctttgcaggatcatggatgacactggaaaccatcattctcagcaaactaacacaggaacagaaaacca-aacaccgcatgttctcattcataagtggaagttgaacaatgagaacatatggacacagggagggg-aacatcacacaccggtgcccgttgggaggtt-ggggcaaggggagggatagcattaggagaaatacccaatgtagatgacaggctgatgggtgcagcaaaccaccatggcacatatat i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2381250 674 - 204787373 agtcttgctgtgtcaccaggctg-gagtgcaatggcatagtctc-agctcactgcaacctccatctcccaggttcaagtgattctcctgcctcagcctccc-gagtagctggaaccacaggcacacaccaccacgcctggc-taattttttgcattttac-tagagacggggtttcaccatgttggccaggatgg-tctcgatctcctgaccttgtgatccacccgcctcagcctcccaaag-tgctgggattacaggcgtgagccatcgtgcccacccccaagcacacatatgtttattgcag-cactattcacaatagcaaagatttggaacctacccaaatgtccatcaatgatagactggataa-agaaaatgt-ggcacatatacactatggaatactatacagccataaaaaaagcatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactatcacaggaatagaaaacca-aagaccgcatgttctcactcataagtgggagttgaacaatgagaacacatggaca-agggagggg-aacatcacacaccgcggcctgtcagggggtggggggctggggcagggagagcattaggagaaatacccaatgtagatgacgggttgatgggtgcagcaaa-caccatggcatgtacat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192447529 674 - 192460366 agtcttgctctgtcaccaggctg-gagtgcaatggcatagtctc-ggctcactgcaacctccatctcccaggttcaagtgattctcctgcctcagcctccc-gagtagctggaaccacaggcacacaccaccacgcctggc-taattttttgcattttac-tagagacggggtttcaccatgttggccaggatgg-tctcgatctcctgaccttgtgatccacctgcctcagcctcccaaag-tgctgggattacaggcgtgagccatcgtgcccatccccaagcacacatatgtttattgcag-cactattcacaatagcaaagatttggaacctacccaaatgtccatcaatgatagactggataa-agaaaatgt-ggcacatatacactatggaatactatacagccataaaaaaagcatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactatcacaggaatagaaaacca-aagaccgcatgttctcactcataagtgggagttgaacaatgagaacacatggaca-agggagggg-aacatcacacaccgcggcctgtcagggggtggggggctggggcagggagagcattaggagaaatacccaatgtagatgacgggttgatgggtgcagcaaa-caccatggcacgtacat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19186561 673 - 19675229 aatcttgctctgtcaccaggctgagagtgcaatggccaagtctcgggctcactgcaacctccattctcca-gttcaagtgattctcctgcctcagcctcccggagtagctggacacacaggcacacac--acacgcctggcttaattttttgcattttacatagagatggggtttcaccatgttgg-caggatggttctcgatctcctgaccttgtgat-cacccgcctcagcctcccaaagctgctgg--ttacaggcgtgagccatcgtgcccatccccaagca-acatatgtttattgcagccactattcacaatagcaaag-tttagaacctaccc-aatgtccatcaatgatagactggataagagaaaatgtgggcacatatacac-atggaatactataccgccataaaaaaagcatgagttcatgtcctttgca-ggacatggatgaagctggaaaccatcattctcagcaaactatcacaggaatagaaaaccacaagaccgcatgttctcactcataagtgggagttgaacaatgagaacacatggaca-agggaggggaaacatcacacaccggggcctgtcaggcgg-ggggggctggggcagggagagcattaggagaaatacccaatgtagatgacgcgttgatgggtgcagcaaa-caccatggcacgtacat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16427325 663 - 16847902 agtcttgctctgtcaccaggctg-gagtgcaatggcatagtctc-ggctcactgcaacctccatctcccaggttcaagtgattctcctgcctcagcctccc-gagtagctggaaccacaggcacacaccaccacgcctggc-taattttttgcattttac-tagagacggggtttcaccatgttggccaggatgg-tctcgatctcctgaccttgtgatccaaccgcctcagcctcccaaag-tgctgggattacaggcgtgagccatcgtgcccatccccaagcacacatatgtttattgcag-cactattcacaatagcaaagatttggaacctacccaaatgtccatcaatgatagactggataa-agaaaatgt-ggcacatatacactatggaatactatacagccat-aaaaaagcatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactatcacaggaatagaaaacca-aagaccgcatgttctccctcattggtgggagttgaacaatgagaacacatggaca-agggagggg-aacatcaca---------ctgtcaggggg-tgggggctggggcagggagagcattaggagaaatgcccaacgtagctgacgggttgatgggtgcagcaaa-caccacagcacgtacat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91392175 675 + 91754291 agtcttgctctgtcaccaggctg-gagtgcaatggcacggtctc-agctcactgcaacctccacctcccaagctcaagtgattctcctgcctcagcctccc-gagtagctggaactacaggcacacaccaccacgcctggc-taattttttgcattttac-tagagacgaggtttcaccatgttggccaggatgg-tctcgatctcctgaccttgtgatccacccgcctcagcttcccaaag-tgttgggattacaggcgtgagccatcgtgcccagccCcaagcacacatatgtttattgcag-cactattcacaatagcaaagatttagaacctacccaaacatccatcaatgatagactggataa-agaaaatgt-ggcacatatacaccatggaatactatgcagccataaaaaagggatgagttcatgtcctttgcagggatatggatgaagctggaaaccatcattttcagcaaactatcacaggaatagaaaacca-aagaccgcatgttctcactcataagtgggagttgaacaatgagaacacatggaca-agggagggg-aacatcacacaccagggactgtcagggggtagggggctaggggagggagagcattaggagaaatacccaatgtagatgacgggttgatgggtgcagcaaaccgccatggcacatatat i chlSab2.chr15 I 82 C 0 s manLeu1.NW_012102020v1 1464914 664 + 1977891 agtcttgctctgtcaccaggctg-gagtgcaatggcatagtctc-ggctcactgcaacctccatctcccaggttcaagtgattctcctgcctcagcctccc-gagtagctggaaccacaggcacacaccaccacgcctggc-taattttttgcattttac-tagagacggggtttcaccatgttggccaggatgg-tctcgatctcctgaccttgtgatccacccgcctcagcctcccaaag-tgttgggattacaggcgtgagccatcgtgcccatccccaagcacacatatgtttattgcag-cactattcacaatagcaaagatttggaacctacccaaatgtccatcaatgatagactggataa-agaaaatgt-ggcacatatgcactatggaatactatacagccataaaaaaagcatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctccgcaaactatcacaggaatagaaaacca-aagactgcatgttctcactcattggtgggagttgaacaatgagaacacatggaca-agggagggg-aacatcac---------actgtcagggggt-gggggctggggcagggagagcattaggagaaatgcccaacgtagctgacgggttgatgggtgcagcaaa-caccacggcacgtacgt i manLeu1.NW_012102020v1 C 0 C 0 e saiBol1.JH378146 17330203 812 - 17725628 I e calJac3.chr17 73898837 957 + 74750902 I e colAng1.NW_012118932v1 7398033 1573 - 7796314 M e nomLeu3.chr11 2883701 10 - 123690457 I a score=227525.000000 s hg38.chr3_KI270934v1_alt 97777 56 + 163458 a-cctatgtaacaacgctgcacgttctgc--acatgtatcccagaacttaaagtataat s panTro5.chr3 2570691 56 - 202621043 a-cctatgtaacaaccctgcatgttctgc--acatgtatcccagaacttaaagtataat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 158811 56 - 190779 a-cctatgtaacaaccctgcacgttctgc--acatgtatcccagaacttaaagtataat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 43979 56 - 106623 a-cctatgtaacaaccctgcatgttctgc--acatgtatcccagaacttaaagtataat i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2381924 54 - 204787373 a-cctatgaaacaaacctgcacgttctgc--acatg--tcccagaacttaaagtataat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192448203 54 - 192460366 a-cctatgaaacaaacctgcacgttctgc--acatg--tcccagaacttaaagtataat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19187234 55 - 19675229 accctatgaaacaaacctgcacgttctgccagcatg--tcccagaac-taaagtat-at i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16427988 54 - 16847902 a-cctatgaaacaaacctgcacgttctgc--acgtg--tcccagaacttaaagtataat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91392850 56 + 91754291 a-cctatgaaacaaacctgcacgttctgc--acgtgtatcccagaacttaaagtataat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1465578 54 + 1977891 a-cctatgaaacaaacctgcacgttctac--acatg--tcccagaacttaaagtataat i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7399619 56 - 7796314 a-cctatgtaacaaacctgcacgttctgt--acatgtatcccagaacttaaagtataat i colAng1.NW_012118932v1 M 1573 C 0 e saiBol1.JH378146 17330203 812 - 17725628 I e calJac3.chr17 73898837 957 + 74750902 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=35446.000000 s hg38.chr3_KI270934v1_alt 97833 12 + 163458 aataat-aataaT s panTro5.chr3 2570747 12 - 202621043 aataat-aataaT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 158867 12 - 190779 aataat-aataat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44035 11 - 106623 aataat-aataa- i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2381978 13 - 204787373 aataataaataaT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192448257 13 - 192460366 aataataaataaT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19187289 12 - 19675229 aataataaaT-AT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16428042 13 - 16847902 aataacaaataaT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91392906 13 + 91754291 aataataaataaT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1465632 13 + 1977891 aataacaaataaT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7399675 13 - 7796314 aataataaataat i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17331015 12 - 17725628 aaaaagaaaaaa- i saiBol1.JH378146 I 812 C 0 e calJac3.chr17 73898837 957 + 74750902 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=412350.000000 s hg38.chr3_KI270934v1_alt 97845 73 + 163458 AA------AGGAA-TTGAGAGACTGTTGATATCAACTGTTCCCTGAGCCACATGG-AAAGCTGTATCCTCTGCAGGCTGCT s panTro5.chr3 2570759 76 - 202621043 AA---TAAAGAAA-TTGAGAGACTGTTGTTATCAACTGTTCCCTGAGCCACATGG-AAAGCTGTATCCTCTGCAGGCTGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 158879 79 - 190779 aataataaAGAAA-TTGAGAGACTGTTGATATCAACTGTTCCCTGAGCCACATGG-AAAGCTGTATCCTCTGCAGGCTGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44046 70 - 106623 --------aGAAA-TTGAGAGACTGTTGATATCAACTATT-CCTGAGCCACATGG-AAAGCTGTATCCTCTGCAGGCTGCT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2381991 74 - 204787373 AAT-----TCAAA-TTGAGAGAATGTTGATATCAACTGCTCCCTGAGCCACATGG-AAAGCTGTATCCTCTGCAGGCTGCT i rheMac8.chr2 C 0 I 36 s macFas5.chr2 192448270 73 - 192460366 AAT-----TCAAA-TTGAGAGAATGTTGATATCAACTGCTCCCTGAGCCACATGG-AAAGCTGTATCCTCTGCAGGCTGC- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19187301 76 - 19675229 AAT-----TCAAACTTGAGAGAATGTTGATATCAACTGCTCCCTGAGTCACATGGAAAAGCTGTATCCTCTGCAGGCTGCT i macNem1.NW_012014355v1 C 0 I 59 s cerAty1.NW_012004056v1 16428055 74 - 16847902 AAT-----TCAAA-TTGAGAGAATGTTGATATCAACTGCTCCCTGAGCCACATGG-AAAGCTGTATCCTCTGCAGGCTGCT i cerAty1.NW_012004056v1 C 0 I 36 s chlSab2.chr15 91392919 74 + 91754291 AAT-----TCAAA-TTGAGAGAATGTTGATATCAACTGCTCCCTGAGCCACATGG-AAAGCTATATCCTCTGCAGGCTGCT i chlSab2.chr15 C 0 I 37 s manLeu1.NW_012102020v1 1465645 74 + 1977891 AAT-----TCAAA-TTGAGAGAATGTTGATATCAACTGCTCCCTGAGCCACATGG-AAAGCTGTATCCTCTGCAGGCTGCT i manLeu1.NW_012102020v1 C 0 I 36 s colAng1.NW_012118932v1 7399688 74 - 7796314 aat-----tcaaa-TTCAGAGAATGTTGATATCAACTGCTCCCTGAGCCACATGG-AAAGCTGTATCCTCTGCAGGCTGCT i colAng1.NW_012118932v1 C 0 I 37 s calJac3.chr17 73899794 73 + 74750902 ------aaagaaa-TTGAGAGAATGTCGATATAAACTGCTCCTTGAGCCATTTGG-AAAGTTGTGTCTGCTGCAGGTTGCT i calJac3.chr17 I 957 C 0 s saiBol1.JH378146 17331027 73 - 17725628 ------aaagaaa-CGGAGAGAATTTTGATATAAACTGCTCCTTGAGCCATTTGG-AAAGCTGTATCTTCTGCAGGTTGCT i saiBol1.JH378146 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I a score=142606.000000 s hg38.chr3_KI270934v1_alt 97918 112 + 163458 TGGTGAGTATGTGA------GGAGGTATATTCATTCACTTTGAGACCTATTTCTCTAAGAAAGGGTCCTGAAAGGC-TTTCCCCTGCTACAGGGACAGCCCTTGGCAAGGAAGCCACTG s panTro5.chr3 2570835 112 - 202621043 TGGTGAGTATGTGA------GGAGGTATATTCATTCACTTTGAGACCTATTTCTCTAAGAAAGGGTCCTGAAAGGC-TTTCCCCTGCTACAGGGACAGCCCTTGGCAAGGAAGCCACTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 158958 112 - 190779 TGGTGAGTATGTGA------GGAGGTATATTCATTCACTTTGAGACCTATTTCTCTAAGAAAGGGTCCTGAAAGGC-TTTCCCCTGCTACAGGGACAGCCCTTGGCAAGGAAGCCACTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44116 112 - 106623 TGGTGAGTATGTGA------GGAGGTACATTCATTCACTTTGAGACCTATTTCTCTAAGAAAGGGTCCTGAAAGGC-TTTCCCCTGCTACAGGGACAGCCCTTGGCAAGGAAGCCACTG i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192448343 77 - 192460366 ----------------------------------------TGAGATGTGTTTCTGTAAG-AGGGGTCCTGAAAGGC-TTTCTCCTGCAATAGGGATGGCCCTTGGCAAGGAAGCCACTG i macFas5.chr2 C 0 T 40 s calJac3.chr17 73899867 118 + 74750902 TGGTGAGTATGTAAGGAGCACAAGGTTCATTTATTCACTTTGAGAAGCATTTCTCTAAGAAGGTGT-CTGAAAGACTTTTCTCCTGCGACAGGGATAGCCCGCAACAAGGAAGTCACTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17331100 109 - 17725628 TGGTGAGTGTG---------CAAGGTTCATTTATTCACGTTGAGAAGCGTTACTCTAAGAAGGTGTCCTGAAAGAC-TTTCTCCTGCGACAGGGACAGCCCTTGACAAGGAAGTCACTT i saiBol1.JH378146 C 0 C 0 e macNem1.NW_012014355v1 19187377 59 - 19675229 I e colAng1.NW_012118932v1 7399762 37 - 7796314 I e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e chlSab2.chr15 91392993 37 + 91754291 I e cerAty1.NW_012004056v1 16428129 36 - 16847902 I e rheMac8.chr2 2382065 36 - 204787373 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=12436.000000 s hg38.chr3_KI270934v1_alt 98030 10 + 163458 TCCTCAGGCA s panTro5.chr3 2570947 10 - 202621043 TCCTCAGGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159070 10 - 190779 TCCTCAGGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44228 10 - 106623 TCCTCAGGCA i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 73899985 10 + 74750902 TCCTTGGGCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17331209 10 - 17725628 TCCTTGGGCA i saiBol1.JH378146 C 0 T 50 e macNem1.NW_012014355v1 19187377 59 - 19675229 I e colAng1.NW_012118932v1 7399762 37 - 7796314 I e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e chlSab2.chr15 91392993 37 + 91754291 I e cerAty1.NW_012004056v1 16428129 36 - 16847902 I e macFas5.chr2 192448420 40 - 192460366 T e rheMac8.chr2 2382065 36 - 204787373 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=7804.000000 s hg38.chr3_KI270934v1_alt 98040 15 + 163458 CACAGGGCTCCTTCA s panTro5.chr3 2570957 15 - 202621043 CGCAGGACTCCTTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159080 15 - 190779 CGCAGGGCTCCTTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44238 15 - 106623 CACAGGGCTCCTTCA i gorGor5.CYUI01000576v1 C 0 C 0 e macNem1.NW_012014355v1 19187377 59 - 19675229 I e saiBol1.JH378146 17331219 50 - 17725628 T e calJac3.chr17 73899995 0 + 74750902 C e colAng1.NW_012118932v1 7399762 37 - 7796314 I e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e chlSab2.chr15 91392993 37 + 91754291 I e cerAty1.NW_012004056v1 16428129 36 - 16847902 I e macFas5.chr2 192448420 40 - 192460366 T e rheMac8.chr2 2382065 36 - 204787373 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=59039.000000 s hg38.chr3_KI270934v1_alt 98055 48 + 163458 TCTCCTGCAACAGATACAGCCCTTGGCAAGGAAGCCACTGTCCTTGAG s panTro5.chr3 2570972 48 - 202621043 TCTCCTGCAACAGATACAGCCCTTGGCAAGGAAGGCACTGTCCTTGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159095 48 - 190779 TCTCCTGCAACAGATACAGCCCTTGGCAAGGAAGGCACTGTCCTTGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44253 48 - 106623 TCTCCTGCAACAGATACAGCCCTTGGCAAGGAAGCCACTGTCCTTGAG i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192448380 48 - 192460366 TCTCCTGCAATAGGGATGGCCCTTGGCAAGGAAGCCACTGTCCTTGGG i macFas5.chr2 T 40 C 0 s saiBol1.JH378146 17331169 48 - 17725628 TCTCCTGCGACAGGGACAGCCCTTGACAAGGAAGTCACTTTCCTTGGG i saiBol1.JH378146 T 50 I 2 e macNem1.NW_012014355v1 19187377 59 - 19675229 I e calJac3.chr17 73899995 0 + 74750902 C e colAng1.NW_012118932v1 7399762 37 - 7796314 I e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e chlSab2.chr15 91392993 37 + 91754291 I e cerAty1.NW_012004056v1 16428129 36 - 16847902 I e rheMac8.chr2 2382065 36 - 204787373 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=16580.000000 s hg38.chr3_KI270934v1_alt 98103 12 + 163458 CACATAGACAGG s panTro5.chr3 2571020 12 - 202621043 CACATAGACAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159143 12 - 190779 CACATAGACAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44301 12 - 106623 CACATAGACAGG i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192448428 12 - 192460366 CACACAGACAGG i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 17331219 12 - 17725628 CACATAGACAGG i saiBol1.JH378146 I 2 T 62 e macNem1.NW_012014355v1 19187377 59 - 19675229 I e calJac3.chr17 73899995 0 + 74750902 C e colAng1.NW_012118932v1 7399762 37 - 7796314 I e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e chlSab2.chr15 91392993 37 + 91754291 I e cerAty1.NW_012004056v1 16428129 36 - 16847902 I e rheMac8.chr2 2382065 36 - 204787373 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=8640.000000 s hg38.chr3_KI270934v1_alt 98115 9 + 163458 GCTCCTTCA s panTro5.chr3 2571032 9 - 202621043 GCTCCTTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159155 9 - 190779 GCTCCTTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44313 9 - 106623 GCTCCTTCA i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192448440 9 - 192460366 GCTCCTTCA i macFas5.chr2 C 0 T 69 e macNem1.NW_012014355v1 19187377 59 - 19675229 I e saiBol1.JH378146 17331231 62 - 17725628 T e calJac3.chr17 73899995 0 + 74750902 C e colAng1.NW_012118932v1 7399762 37 - 7796314 I e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e chlSab2.chr15 91392993 37 + 91754291 I e cerAty1.NW_012004056v1 16428129 36 - 16847902 I e rheMac8.chr2 2382065 36 - 204787373 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=62158.000000 s hg38.chr3_KI270934v1_alt 98124 48 + 163458 TCTCCTGCAACAGGGACAGCCCTTGGCAAGGAAGCCACTGCCCTTGAG s panTro5.chr3 2571041 48 - 202621043 TCTCCTGCAACAGGGACAGCCCTTGGCAAGGAAGCCACTGTCCTTGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159164 48 - 190779 TCTCCTGTAACAGGGACAGCCCTTGGCAAGGAAGCCACTGTCCTTGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44322 48 - 106623 TCTCCTGCAACAGGGACAGCCCTTGGCAAGGAAGCCACTGTCCTTGAG i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192448380 48 - 192460366 TCTCCTGCAATAGGGATGGCCCTTGGCAAGGAAGCCACTGTCCTTGGG i macFas5.chr2 T 69 C 0 s saiBol1.JH378146 17331169 48 - 17725628 TCTCCTGCGACAGGGACAGCCCTTGACAAGGAAGTCACTTTCCTTGGG i saiBol1.JH378146 T 62 T 48 e macNem1.NW_012014355v1 19187377 59 - 19675229 I e calJac3.chr17 73899995 0 + 74750902 C e colAng1.NW_012118932v1 7399762 37 - 7796314 I e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e chlSab2.chr15 91392993 37 + 91754291 I e cerAty1.NW_012004056v1 16428129 36 - 16847902 I e rheMac8.chr2 2382065 36 - 204787373 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=19612.000000 s hg38.chr3_KI270934v1_alt 98172 21 + 163458 CACATAGACAGGGCTCCTTCA s panTro5.chr3 2571089 21 - 202621043 CACATAGACAGGGCTCCTTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159212 21 - 190779 CACATAGACAGGGCTCCTTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44370 21 - 106623 CACATAGACAGGGCTCCTTCA i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192448428 21 - 192460366 CACACAGACAGGGCTCCTTCA i macFas5.chr2 C 0 T 69 e macNem1.NW_012014355v1 19187377 59 - 19675229 I e saiBol1.JH378146 17331217 48 - 17725628 T e calJac3.chr17 73899995 0 + 74750902 C e colAng1.NW_012118932v1 7399762 37 - 7796314 I e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e chlSab2.chr15 91392993 37 + 91754291 I e cerAty1.NW_012004056v1 16428129 36 - 16847902 I e rheMac8.chr2 2382065 36 - 204787373 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=84517.000000 s hg38.chr3_KI270934v1_alt 98193 48 + 163458 TCTCCTGCAACAGGGACAGCCCTTGGCAAGGAAGCCACTGTCCTTGAG s panTro5.chr3 2571110 48 - 202621043 TCTCCTGCAACAGGGACAGCCCTTGGCAAGGAAGCCACTGTCCTTGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159233 48 - 190779 TCTCCTGCAACAGGGACAGCCCTTGGCAAGGAAGCCACTGTCCTTGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44391 47 - 106623 TCTCCTGCAACAGGGACAGCCCTT-GCAAGGAAGCCACTGTCCTTGAG i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192448380 48 - 192460366 TCTCCTGCAATAGGGATGGCCCTTGGCAAGGAAGCCACTGTCCTTGGG i macFas5.chr2 T 69 C 0 s colAng1.NW_012118932v1 7399799 48 - 7796314 TCTCCTGCAATAGGGACGGCCCTTGGCAAGGAAGGCACTGTCCTTGAG i colAng1.NW_012118932v1 I 37 C 0 s saiBol1.JH378146 17331169 48 - 17725628 TCTCCTGCGACAGGGACAGCCCTTGACAAGGAAGTCACTTTCCTTGGG i saiBol1.JH378146 T 48 T 48 e macNem1.NW_012014355v1 19187377 59 - 19675229 I e calJac3.chr17 73899995 0 + 74750902 C e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e chlSab2.chr15 91392993 37 + 91754291 I e cerAty1.NW_012004056v1 16428129 36 - 16847902 I e rheMac8.chr2 2382065 36 - 204787373 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=1500.000000 s hg38.chr3_KI270934v1_alt 98241 1 + 163458 C s panTro5.chr3 2571158 1 - 202621043 C i panTro5.chr3 C 0 T 69 s panPan2.chrUn_NW_014024201v1 159281 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44438 1 - 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192448428 1 - 192460366 C i macFas5.chr2 C 0 C 0 s colAng1.NW_012118932v1 7399847 1 - 7796314 C i colAng1.NW_012118932v1 C 0 C 0 e macNem1.NW_012014355v1 19187377 59 - 19675229 I e saiBol1.JH378146 17331217 48 - 17725628 T e calJac3.chr17 73899995 0 + 74750902 C e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e chlSab2.chr15 91392993 37 + 91754291 I e cerAty1.NW_012004056v1 16428129 36 - 16847902 I e rheMac8.chr2 2382065 36 - 204787373 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=4050.000000 s hg38.chr3_KI270934v1_alt 98242 7 + 163458 ACATAGA s panTro5.chr3 2571090 7 - 202621043 ACATAGA i panTro5.chr3 T 69 C 0 s panPan2.chrUn_NW_014024201v1 159282 7 - 190779 ACACAGA i panPan2.chrUn_NW_014024201v1 C 0 T 69 s gorGor5.CYUI01000576v1 44439 2 - 106623 AC----- i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192448429 7 - 192460366 ACACAGA i macFas5.chr2 C 0 C 0 s colAng1.NW_012118932v1 7399848 7 - 7796314 ACACAGA i colAng1.NW_012118932v1 C 0 C 0 e macNem1.NW_012014355v1 19187377 59 - 19675229 I e saiBol1.JH378146 17331217 48 - 17725628 T e calJac3.chr17 73899995 0 + 74750902 C e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e chlSab2.chr15 91392993 37 + 91754291 I e cerAty1.NW_012004056v1 16428129 36 - 16847902 I e rheMac8.chr2 2382065 36 - 204787373 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=5910.000000 s hg38.chr3_KI270934v1_alt 98249 6 + 163458 CAGGGC s panTro5.chr3 2571097 6 - 202621043 CAGGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159220 6 - 190779 CAGGGC i panPan2.chrUn_NW_014024201v1 T 69 C 0 s macFas5.chr2 192448436 6 - 192460366 CAGGGC i macFas5.chr2 C 0 T 22 s colAng1.NW_012118932v1 7399855 6 - 7796314 CAGGGC i colAng1.NW_012118932v1 C 0 C 0 e macNem1.NW_012014355v1 19187377 59 - 19675229 I e saiBol1.JH378146 17331217 48 - 17725628 T e calJac3.chr17 73899995 0 + 74750902 C e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e chlSab2.chr15 91392993 37 + 91754291 I e cerAty1.NW_012004056v1 16428129 36 - 16847902 I e rheMac8.chr2 2382065 36 - 204787373 I e nomLeu3.chr11 2883701 10 - 123690457 I e gorGor5.CYUI01000576v1 44441 0 - 106623 C a score=3984.000000 s hg38.chr3_KI270934v1_alt 98255 7 + 163458 TCCTTCA s panTro5.chr3 2571103 7 - 202621043 TCCTTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159226 7 - 190779 TCCTTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s colAng1.NW_012118932v1 7399861 7 - 7796314 TCCTTCA i colAng1.NW_012118932v1 C 0 T 69 e macNem1.NW_012014355v1 19187377 59 - 19675229 I e saiBol1.JH378146 17331217 48 - 17725628 T e calJac3.chr17 73899995 0 + 74750902 C e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e chlSab2.chr15 91392993 37 + 91754291 I e cerAty1.NW_012004056v1 16428129 36 - 16847902 I e macFas5.chr2 192448442 22 - 192460366 T e rheMac8.chr2 2382065 36 - 204787373 I e nomLeu3.chr11 2883701 10 - 123690457 I e gorGor5.CYUI01000576v1 44441 0 - 106623 C a score=60143.000000 s hg38.chr3_KI270934v1_alt 98262 25 + 163458 TCTCCTGCAACAGGGACAGCCCTTG s panTro5.chr3 2571110 25 - 202621043 TCTCCTGCAACAGGGACAGCCCTTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159233 25 - 190779 TCTCCTGCAACAGGGACAGCCCTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 2382101 25 - 204787373 TCTCCTGCAATAGGGATGGCCCTTG i rheMac8.chr2 I 36 C 0 s cerAty1.NW_012004056v1 16428165 25 - 16847902 TCTCCTGCAATAGGGATGGCCCTTG i cerAty1.NW_012004056v1 I 36 C 0 s chlSab2.chr15 91393030 25 + 91754291 TCTCCTGCAATAGGGGCGGCCCTTG i chlSab2.chr15 I 37 C 0 s colAng1.NW_012118932v1 7399799 25 - 7796314 TCTCCTGCAATAGGGACGGCCCTTG i colAng1.NW_012118932v1 T 69 C 0 s saiBol1.JH378146 17331169 25 - 17725628 TCTCCTGCGACAGGGACAGCCCTTG i saiBol1.JH378146 T 48 C 0 e macNem1.NW_012014355v1 19187377 59 - 19675229 I e calJac3.chr17 73899995 0 + 74750902 C e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e macFas5.chr2 192448442 22 - 192460366 T e nomLeu3.chr11 2883701 10 - 123690457 I e gorGor5.CYUI01000576v1 44441 0 - 106623 C a score=33128.000000 s hg38.chr3_KI270934v1_alt 98287 23 + 163458 GCAAGGAAGCCACTG-------TCCTTGAG s panTro5.chr3 2571135 23 - 202621043 GCAAGGAAGCCACTG-------TCCTTGAG i panTro5.chr3 C 0 I 1 s panPan2.chrUn_NW_014024201v1 159258 23 - 190779 GCAAGGAAGCCACTG-------TCCTTGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 2382126 15 - 204787373 GCAAGGAAGCCACTG--------------- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 19187436 15 - 19675229 GCAAGGAAGCCACTG--------------- i macNem1.NW_012014355v1 I 59 C 0 s cerAty1.NW_012004056v1 16428190 15 - 16847902 GCAAGGAAGCCACTG--------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91393055 15 + 91754291 GCAAGGAAGCCACTG--------------- i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 7399824 22 - 7796314 GCAAGGAAGGCACTGTCCTTGA-------- i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 17331194 23 - 17725628 ACAAGGAAGTCACTT-------TCCTTGGG i saiBol1.JH378146 C 0 T 48 e calJac3.chr17 73899995 0 + 74750902 C e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e macFas5.chr2 192448442 22 - 192460366 T e nomLeu3.chr11 2883701 10 - 123690457 I e gorGor5.CYUI01000576v1 44441 0 - 106623 C a score=300.000000 s hg38.chr3_KI270934v1_alt 98310 1 + 163458 C s panPan2.chrUn_NW_014024201v1 159281 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s calJac3.chr17 73899995 1 + 74750902 C i calJac3.chr17 C 0 C 0 e macNem1.NW_012014355v1 19187451 0 - 19675229 C e saiBol1.JH378146 17331217 48 - 17725628 T e colAng1.NW_012118932v1 7399846 0 - 7796314 C e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e chlSab2.chr15 91393070 0 + 91754291 C e cerAty1.NW_012004056v1 16428205 0 - 16847902 C e macFas5.chr2 192448442 22 - 192460366 T e rheMac8.chr2 2382141 0 - 204787373 C e nomLeu3.chr11 2883701 10 - 123690457 I e gorGor5.CYUI01000576v1 44441 0 - 106623 C e panTro5.chr3 2571158 1 - 202621043 I a score=1816.000000 s hg38.chr3_KI270934v1_alt 98311 3 + 163458 ACA s panTro5.chr3 2571159 3 - 202621043 ACA i panTro5.chr3 I 1 C 0 s panPan2.chrUn_NW_014024201v1 159282 3 - 190779 ACA i panPan2.chrUn_NW_014024201v1 C 0 I 4 s gorGor5.CYUI01000576v1 44441 1 - 106623 --A i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 73899996 3 + 74750902 ACA i calJac3.chr17 C 0 C 0 e macNem1.NW_012014355v1 19187451 0 - 19675229 C e saiBol1.JH378146 17331217 48 - 17725628 T e colAng1.NW_012118932v1 7399846 0 - 7796314 C e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e chlSab2.chr15 91393070 0 + 91754291 C e cerAty1.NW_012004056v1 16428205 0 - 16847902 C e macFas5.chr2 192448442 22 - 192460366 T e rheMac8.chr2 2382141 0 - 204787373 C e nomLeu3.chr11 2883701 10 - 123690457 I a score=1872.000000 s hg38.chr3_KI270934v1_alt 98314 4 + 163458 TAGA s panTro5.chr3 2571162 4 - 202621043 CAGA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 44442 4 - 106623 TAGA i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 73899999 4 + 74750902 TAGA i calJac3.chr17 C 0 C 0 e macNem1.NW_012014355v1 19187451 0 - 19675229 C e saiBol1.JH378146 17331217 48 - 17725628 T e colAng1.NW_012118932v1 7399846 0 - 7796314 C e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e chlSab2.chr15 91393070 0 + 91754291 C e cerAty1.NW_012004056v1 16428205 0 - 16847902 C e macFas5.chr2 192448442 22 - 192460366 T e rheMac8.chr2 2382141 0 - 204787373 C e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 159285 4 - 190779 I a score=7550.000000 s hg38.chr3_KI270934v1_alt 98318 13 + 163458 CAGGGCTCCTTCA s panTro5.chr3 2571166 13 - 202621043 CAGGGCTCCTTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159289 13 - 190779 CAGGGCTCCTTCA i panPan2.chrUn_NW_014024201v1 I 4 C 0 s gorGor5.CYUI01000576v1 44446 13 - 106623 CAGCGCTCCTTCA i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 73900003 10 + 74750902 CAGGGCCCTT--- i calJac3.chr17 C 0 C 0 e macNem1.NW_012014355v1 19187451 0 - 19675229 C e saiBol1.JH378146 17331217 48 - 17725628 T e colAng1.NW_012118932v1 7399846 0 - 7796314 C e manLeu1.NW_012102020v1 1465719 36 + 1977891 I e chlSab2.chr15 91393070 0 + 91754291 C e cerAty1.NW_012004056v1 16428205 0 - 16847902 C e macFas5.chr2 192448442 22 - 192460366 T e rheMac8.chr2 2382141 0 - 204787373 C e nomLeu3.chr11 2883701 10 - 123690457 I a score=49478.000000 s hg38.chr3_KI270934v1_alt 98331 39 + 163458 TCTCCTGCGACAGGGACAGCCCTTGGCAAGGATGTCACT s panTro5.chr3 2571179 39 - 202621043 TCTCCTGCGACAGGGACAGCCCTTGGCAAAGATGTCACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159302 39 - 190779 TCTCCTGCGACAGGGACAGCCCTTGGCAAGGATGTCACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44459 39 - 106623 TCTCCTGCGACAGGGACAGCCCTTGGCAAGGATGTCACT i gorGor5.CYUI01000576v1 C 0 C 0 s manLeu1.NW_012102020v1 1465755 39 + 1977891 TCTTCTGCAATAGGGATGGCCCTTGGCAAGGAAGCCACT i manLeu1.NW_012102020v1 I 36 I 1 s saiBol1.JH378146 17331169 39 - 17725628 TCTCCTGCGACAGGGACAGCCCTTGACAAGGAAGTCACT i saiBol1.JH378146 T 48 C 0 e macNem1.NW_012014355v1 19187451 0 - 19675229 C e calJac3.chr17 73900013 0 + 74750902 C e colAng1.NW_012118932v1 7399846 0 - 7796314 C e chlSab2.chr15 91393070 0 + 91754291 C e cerAty1.NW_012004056v1 16428205 0 - 16847902 C e macFas5.chr2 192448442 22 - 192460366 T e rheMac8.chr2 2382141 0 - 204787373 C e nomLeu3.chr11 2883701 10 - 123690457 I a score=5005.000000 s hg38.chr3_KI270934v1_alt 98370 1 + 163458 T s panTro5.chr3 2571218 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159341 1 - 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44498 1 - 106623 T i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2382141 1 - 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192448420 1 - 192460366 T i macFas5.chr2 T 22 C 0 s macNem1.NW_012014355v1 19187451 1 - 19675229 T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16428205 1 - 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91393070 1 + 91754291 T i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1465795 1 + 1977891 T i manLeu1.NW_012102020v1 I 1 C 0 s saiBol1.JH378146 17331208 1 - 17725628 T i saiBol1.JH378146 C 0 I 22 e calJac3.chr17 73900013 0 + 74750902 C e colAng1.NW_012118932v1 7399846 0 - 7796314 C e nomLeu3.chr11 2883701 10 - 123690457 I a score=99115.000000 s hg38.chr3_KI270934v1_alt 98371 21 + 163458 CCTTGGGCACACAGACAGGGC s panTro5.chr3 2571219 21 - 202621043 CCTTGGGCACACAGACAGGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159342 21 - 190779 CCTTGGGCACACAGACAGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44499 21 - 106623 CCTTGGGCACACAGACAGGGC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2382142 21 - 204787373 CCTTGGGCACACAGACAGGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192448421 21 - 192460366 CCTTGGGCACACAGACAGGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19187452 20 - 19675229 CCTTGGGCACACAGACA-GGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16428206 21 - 16847902 CCTTGGGCACACAGACAGGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91393071 21 + 91754291 CCTTGGGCACACAGACAGGGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1465796 21 + 1977891 CCTTGGGCACACAGACAGGGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7399846 15 - 7796314 ------GCACACAGACAGGGC i colAng1.NW_012118932v1 C 0 C 0 e saiBol1.JH378146 17331209 22 - 17725628 I e calJac3.chr17 73900013 0 + 74750902 C e nomLeu3.chr11 2883701 10 - 123690457 I a score=1326697.000000 s hg38.chr3_KI270934v1_alt 98392 221 + 163458 TCCTTCAGCAGACAGCAGATAGATA-TGCAATGCAAGCCTTGGTTTTTTGGGATGATTCC-AATGCAGCACCAgatacgtgtgtccaattctggggtttgctcataggaaacccatgtgccagcaaatctatgtcacattctccagtatcacctttataaggaataaagTCAATTTACTGTTCTTCTGTAA----AAAGAAAGAAACGTATTCATGACTGTAGCTTG s panTro5.chr3 2571240 221 - 202621043 TCCTTCAGCAGACAGCAGATAGATA-TGCAATGCAAGCCTTGGTTTTTTGGGATGATTCC-AATGCAGCACCAgatacgtgtgtccaattctggggtttgctcataggaaacccatgtgccagcaaatctatgtcacattctccagtatcaccttcataaggaataaagtcaatttactgttcttcTTTAA----AAAGAAAGAAACGTATTCATGACTGTAGCTTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159363 221 - 190779 TCCTTCAGCAGACAGCAGATAGATA-TGCAATGCAAGCCTTGGTTTTTTGGGATGATTCC-AATGCAGCACCAGACACgtgtgtccaattctggggtttgctcataggaaacccatgtgccagcaaatctatgtcacattctccagtatcacctttataaggaataaagTCAATTTACTGTTCTTCTTTAA----AAAGAAAGAAACGTATTCATGACTGTAGCTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44520 221 - 106623 TCCTTCAGCAGACAGCAGATAGATA-TGCAATGCAAGCCTTGGTTTCTTGGAATGATTCC-AATGCAGCACCAgatacgtgtgtccaattctggggtttgctcataggaaacccatgtgccagcaaatctatgtcacattctccagtatcacctttataaggaataaagTCAATTTACTGTTCTTCTGTAA----AAAGAAAGAAACGTATTCATGACTGTAGCTTG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2382163 222 - 204787373 TCCTTCAGCAGGCAGCAGATAGATA-TGCAATGCAGGCCTTGGTTTTTTGGGATGGTTCC-AATGTAGCGCtggatacgtctgtccaattctggggtttgttcataggaaacccatgtgccagcaaatctatgtcacattctccagtatcacctttataaggaataaagtcaatttattgttctt---taAAAAGAAAGAAAGAAACGTAGTCATGACTGTAGCTTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192448442 218 - 192460366 TCCTTCAGCAGGCAGCAGATAGATA-TGCAATGCAGGCCTTGGTTTTTTGGGATGGTTCC-AATGTAGCGCtggatacgtctgtccaattctggggtttgttcataggaaacccatgtgccagcaaatgtatgtcacattctccagtatcacctttataaggaataaagtcaatttattgttctt---taAA----AAGAAAGAAACGTAGTCATGACTGTAGCTTG i macFas5.chr2 C 0 I 361 s macNem1.NW_012014355v1 19187472 219 - 19675229 TCCTTCAGCAGGCAGCAGATAGATACTGCAATGCAGGCCTTGGTTTTTTGGGATGGTTCCAAATGTAGCGCtggatacg-ctgtccaattctggggtttgttcataggaa--ccatgtggcagcaaatctatgtcacattctccagtatcacctttataaggaataaagtcaatttattgttctt---taAAA--GAAGAAAGAAACGTAGTCATGACTGTAGCTTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16428227 222 - 16847902 TCCTTCAGCAGGCAGCAGATAGATA-TGCAATGCAGGCCTTGGTTTTTTGGGATGGTTCC-AATGTAGCACtggatacgtctgtccaattctggggtttgttcataggaaacccatgtgccagcaaatctatgtcacattctccagtatcacctttataaggaataaagtcaatttattgttctt---taAAAAGAAAGGAAGAAACGTAGTCATGACTGTAGCTTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91393092 217 + 91754291 TCCTTCAGCAGACAGCAGATAGATA-TGCAATGCAGGCCTTGG-TTTTTGGGATGGTTCC-AGTGTAGCACtggatacatctgtccaattctggggtttgttcataggaaacccatgtgccagcaaatctatgtcacattctccagtatcacctttataaggaataaagtcaatttattgttctt---taA----AAAGAAAGAAACGTAGTCATGACTGTAGCTTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1465817 222 + 1977891 TCCTTCAGCAGGCAGCAGATAGATA-TGCAATGCAGGCCTTGGTTTTTTGGGATGGTTCC-AATGTAGCACtggatacgtctgtccaattctggggtttgttcataggaaacccatgtgccagcaaatctatgtcacattctccagtatcacctttataaggaataaagtcaatttattgttctt---taAAAAGAAAGAAAGAAACGTAGTCATGACTGTAGCTTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7399861 222 - 7796314 TCCTTCAGCAGACAGCAGATAGAAA-TGCAGTGCAGGCCTTGGTTTTTTGGGATGGTTCC-AATGTAGCACtggatacgtctgtccaattctggggtttgttcataggaaacccacgtgccagcgaatctatgtcacattctccagtatcacctttataaggaataaagtcaatttattgttctT---TGAAAAGAAAGAAAGAAACGTAGTCATGACTGTAGCTTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73900013 211 + 74750902 --------CAGACAACAGGGAGATA-CAGAATGCAGGCCTTGGCTTTCTGTGATGGTCCC-AATGTAGCACtgggtaagtctgtccagttttggggtttattcacaggaaacccacatgccagcgaatctatgtcacattctccagtatcagctttataaggaacgaagTCAATTTACTGTTCTT---AAAA---AAAGAAAGAAATGTAGCCGTAACTGTAGCTTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17331231 215 - 17725628 CCCTT---CAGACAACAGGTGGACA-CAGAATGCAGGCCTTGGCTTTTCGTGATGGTCCC--GCGCAGCCCtgggtaagtctctccaattttggagtttattcacaagaaatccatgtgccagcaaatctatgtcacattctccagtatcagctttataaggaataaagccaatttattgttctT---AAAA---AAAGAAAGAAATATAGCCATAACTGTAGCTTA i saiBol1.JH378146 I 22 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I a score=6228.000000 s hg38.chr3_KI270934v1_alt 98613 1 + 163458 G s panTro5.chr3 2571461 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159584 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44741 1 - 106623 A i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2382385 1 - 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192449021 1 - 192460366 G i macFas5.chr2 I 361 C 0 s macNem1.NW_012014355v1 19187691 1 - 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16428449 1 - 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91393309 1 + 91754291 G i chlSab2.chr15 C 0 I 102 s manLeu1.NW_012102020v1 1466039 1 + 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7400083 1 - 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73900224 1 + 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17331446 1 - 17725628 G i saiBol1.JH378146 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I a score=13434.000000 s hg38.chr3_KI270934v1_alt 98614 2 + 163458 CT s panTro5.chr3 2571462 2 - 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159585 2 - 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44742 2 - 106623 CT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2382386 2 - 204787373 CT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192449022 2 - 192460366 CC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19187692 2 - 19675229 CT i macNem1.NW_012014355v1 C 0 I 261 s cerAty1.NW_012004056v1 16428450 2 - 16847902 CT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91393412 2 + 91754291 CT i chlSab2.chr15 I 102 C 0 s manLeu1.NW_012102020v1 1466040 2 + 1977891 CT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7400084 2 - 7796314 CT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73900225 2 + 74750902 CT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17331447 2 - 17725628 CT i saiBol1.JH378146 C 0 I 5 e nomLeu3.chr11 2883701 10 - 123690457 I a score=81471.000000 s hg38.chr3_KI270934v1_alt 98616 13 + 163458 GTCACTCAAGTGC s panTro5.chr3 2571464 13 - 202621043 GTCACTCAAGTGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159587 13 - 190779 GTCACTCAAGTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44744 13 - 106623 GTCACTCAAGTGC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2382388 13 - 204787373 GTCACTCAGGTGC i rheMac8.chr2 C 0 I 361 s macFas5.chr2 192449024 13 - 192460366 GTCACTCAGATAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19187955 13 - 19675229 GTCACTCAGATAC i macNem1.NW_012014355v1 I 261 C 0 s cerAty1.NW_012004056v1 16428452 13 - 16847902 GTCACTCAGGTGC i cerAty1.NW_012004056v1 C 0 I 409 s chlSab2.chr15 91393414 13 + 91754291 GTCACTCAGGTGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1466042 13 + 1977891 GTCACTCAGGTGC i manLeu1.NW_012102020v1 C 0 I 240 s colAng1.NW_012118932v1 7400086 13 - 7796314 GTCACTCAGCTGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73900227 13 + 74750902 GTCATTCAAGTGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17331454 13 - 17725628 GTCATTCAGGTGC i saiBol1.JH378146 I 5 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I a score=14196.000000 s hg38.chr3_KI270934v1_alt 98629 2 + 163458 AA s panTro5.chr3 2571477 2 - 202621043 AA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159600 2 - 190779 AA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44757 2 - 106623 AA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2382762 2 - 204787373 AA i rheMac8.chr2 I 361 C 0 s macFas5.chr2 192449037 2 - 192460366 AA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19187968 2 - 19675229 AA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16428874 2 - 16847902 AA i cerAty1.NW_012004056v1 I 409 C 0 s chlSab2.chr15 91393427 2 + 91754291 AA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1466295 2 + 1977891 AA i manLeu1.NW_012102020v1 I 240 C 0 s colAng1.NW_012118932v1 7400099 2 - 7796314 AA i colAng1.NW_012118932v1 C 0 I 120 s calJac3.chr17 73900240 2 + 74750902 AA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17331467 2 - 17725628 AA i saiBol1.JH378146 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I a score=913191.000000 s hg38.chr3_KI270934v1_alt 98631 160 + 163458 GTGAATGGTGGATGTGGC-CGCGCGGCTC-CACGCACTGATTCATAATCCCCAAAAGGGACAAGGGCAGACCCAGCTCTCTGCAGGGCAAACG-CTCCAC-AACCCAAAACACTTGTTTCTGTTGTTGTTGCTGTTTGGAAACTCCCTCTTCTATTTCCCACCT s panTro5.chr3 2571479 160 - 202621043 GTGAATGGTGGATGTGGC-CGCATGGCTC-CACCCACTGATCCATAATCCCCAAAAGGGACCAGGGCAGACCCAGCTCTCTGCAGGGCAAATG-CTCCAC-AACCCAAAACACTTGTTTCTGTTGTTGTTGCTGTTTGGAAACtccctcttctatttcccacct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159602 160 - 190779 GTGAATGGTGGATGTGGC-CACGCGGCTC-CACCCACTGATCCATAATCCCCAAAAGGGACCAGGGCAGACCCAGCTCTCTGCAGGGCAAACG-CTCCAC-AACCCAAAACACTTGTTTCTGTTGTTGTTGCTGTTTGGAAACtccctcttctatttcccacct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44759 160 - 106623 GTGAATGGTGGATGTGGC-TGCGCGGCTC-CACCCACTGATCCATAATCCCCAAAAGGGACCAGGGCAGACCCAGCTCTCTGCAGGGCAAACG-CTCCAC-AACCCAAAACACTTGTTTCTGTTGTTGTTGCTGTTTGGAAACtccctcttctatttcccacct i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2382764 159 - 204787373 GTGAATGGTGGATGTGGC-CGCGCAGCTC-CACGCGCTGATCCATAATCCCCACAAATGTCCAGGGCAGACCCAGCTCTCACCAGGGCAAATG-CTCCAC-AACCCAATACACTTGTTTCTGTTG-TGTTGCTGTTTGGAAACTCCCTCTCCTATTTCCCACCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192449039 159 - 192460366 GTGAATGGTGGATGTGGC-CGCGCAGCTC-CACGCGCTGATCCATAATCCCCACAAATGTCCAGGGCAGACCCAGCTCTCACCAGGGCAAATG-CTCCAC-AACCCAATACACTTGTTTCTGTTG-TGTTGCTGTTTGGAAACTCCCTCTCCTATTTCCCACCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19187970 159 - 19675229 GTGAATGGTGGATGTGGC-CGCGCAGCTC-CACGCGCTGATCCATAATCCCC-CAAATGTCCAGGGCAGACCCAGCTCTCACCAGGGCAAATGCCTCCACAAACCCAATACACGTTTTTCTG-TG-TGTTGCTGTTTGGAAACGTCCTCTCCTATTTCCCACCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16428876 159 - 16847902 GTGAATGGTGGATGTGGC-CGCGTGGCTC-CACACACTGATCCATAATCCCCACAAATGTCCAGGGCAGACCCAGCTCTCACCAGGGCAAATG-CTCCAC-AACCCAATACACTTGTTTCTGTTG-TGTTGCTATTTGGAAACTCCCTCTCCTATTTCCCACCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91393429 159 + 91754291 GTGAATGGTGGATGTGGC-CGCGCGGCTC-CATGCACTGATCCATAATCCCCACAAATGTCCAGGGCAGACCCAGCTCTCTCCAGGGCAAATG-CTCCAC-AACTCAATACACTTGTTTCTGTTG-TGTTGCTGTTTGGAAActccctctcctatttcccacct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1466297 159 + 1977891 GTGAATGGTGGATGTGGC-CGTGCAGCTC-CACACACTGATCCATAATCCCCGCAAATGTCCAGGGCAGACCCAGCTCTCACCAGGGCAAATG-CTCCAC-AACCCAATACACTTGTTTCTGTTG-TGTTGCTATTTGGAAACTCCCTCTCCTATttcccacct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7400221 159 - 7796314 GTGAATGGTGGATGTGGC-CGCACGGCTC-TATGTGCTGATCCATAATCCCCACAAATGTCCAGGGCAGACCCAGCTCTCTCCAGGGCAAATG-CTCCAC-AACCCAATACACTTGTTTCTCTGG-TGTTGCTGTTTGGAAACtccctctcctatttcccacct i colAng1.NW_012118932v1 I 120 C 0 s calJac3.chr17 73900242 162 + 74750902 GCAAATGGTGAATGTGACTCACGCGGCTGATACGCACTGATACACAATCCTCAAGAGCATCCCGGCCGGACACAGCGTCGTGCAGGGCAAATG-CTCCAC-AACCCAATAAACTTGTTTCTGCTGTTCTTGCTGTTTGGAAATTCCCTTTCCTATTTCCCCCCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 17331469 161 - 17725628 GCGAATGGTGACTGTGACTCACGCGGCTTACACGCACTGATCCGTGACCCTCAA-AACATCCAGGCCGGACTCAGCGCTGTGCAGGGCACATG-CTCCAC-AACCCAATAAACTTGTTTCTGCTGTTCTTGCTGTTTGGAAActccctctcctatttccccact i saiBol1.JH378146 C 0 I 338 e nomLeu3.chr11 2883701 10 - 123690457 I a score=97040.000000 s hg38.chr3_KI270934v1_alt 98791 15 + 163458 CCctctttcccgttc s panTro5.chr3 2571639 15 - 202621043 ccctctttcccgttc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 159762 15 - 190779 ccctctttcccgttc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44919 15 - 106623 ccctttttcccgttc i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2382923 15 - 204787373 CCCTCTTTTCCGTTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192449198 15 - 192460366 CCCTCTTTTCCGTTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19188129 15 - 19675229 CCCTCTTTTCCGTTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16429035 15 - 16847902 CCCTCTTTTCCGTTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91393588 15 + 91754291 ccctgtttcccgttc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1466456 15 + 1977891 ccctcttttccgttc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7400380 15 - 7796314 ccctctttcccgttc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73900404 15 + 74750902 CTCTCTTTCCTGTTC i calJac3.chr17 C 0 I 316 s saiBol1.JH378146 17331968 15 - 17725628 ccttctttcccattc i saiBol1.JH378146 I 338 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I a score=1845013.000000 s hg38.chr3_KI270934v1_alt 98806 338 + 163458 tcattcccttttctctgctcctatttctgtttccctCAGTTCCACCTAATACCCCGT-GGTGTCACCCTAGCCCTTTCCTCTACCCACT-CCAGCCTTACTACCCCCAACGTCCCACACCCTGGGAAACACCAAGGTCTGCCTCTGTACCTCCAAG--TTCTTTCCC-C----GTTATTGCCCTGGGTCAGTcctttgt-ggggg-ctcctctctcctctcttgatttcttttcatctggctaacctctaatcctgtaagatttacctcaaatatctttcaagaagtattttctgaatccaaggaggacctaaaagcca-ttctgctggcctcccagagct-gaatct-gcc s panTro5.chr3 2571654 340 - 202621043 tcattcccttttctctggtcctatttctgtttccctCAGTTCCACCTAATACCCCGT-GGTGTCACCCTAGCCCTTTCCTCTACCCACT-CCAGCCTTACTACCCGCAACGTCCCACACCCTGGGAAACACCAAGGTCTGCCTCTGTACCTCCAAG--TTCTTTCCC-CC--TGTTATTGCCCTGGGTCAGTCCTTTGT-GGGGG-CTCCTCTCTCCTCTCTTGATTtcttttcatctggctaacctctaatcctgtaagatttacctcaaatatctttcaagaagtattttctgaatccaaggaggacctaaaagcca-ttctgctggcctgccagagcT-GAATCT-GCC i panTro5.chr3 C 0 I 12 s panPan2.chrUn_NW_014024201v1 159777 340 - 190779 tcattcccttttctctgctcctatttctgtttccctCAGTTCCACCTAATACCCCGT-GGTGTCAccccagccctttcctctacccact-ccagccttactacccccaacgtcccacaccctgggaaacaccaaggtctgcctctgtacctccaag--ttctttccc-cc--tgttattgccctgggtcagtcctttgt-ggggg-ctcctctctcctctcttgatttcttttcatctggctaacctctaatcctgtaagatttacctcaaatatctttcaagaagtattttctgaatccaaggaggacctaaaagcca-ttctgctggcctcccagagcT-GAATCT-GCC i panPan2.chrUn_NW_014024201v1 C 0 I 12 s gorGor5.CYUI01000576v1 44934 342 - 106623 tcattcccttttctctgctcctatttctgtttccctCAGTTCCACCTAATACCCCGT-GGTGTCACCCTAGCcctttcctctacccact-ccagccttactacccccaacgtcccaaaccctgggaaacaccaaggtctgcctctgtacctccaag--ttctttccc-cc--tgttattgccctgggtcagtcctttgtgggggg-ctcctctctcctctcttgatttcttttcgtctggctaacctctaatcccgtaagatttacctcaaatatctttcaagaagtattttctgaatccaaggagggccgaaaagccatttctgctggcctcccagagct-gaatct-gcc i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2382938 337 - 204787373 TCGTTCCCTTTTCCCTGCTCCTATT--TGTTTCCCTCAGTTCCGCCTAATACCCCGG-GGTGTCACCCTAGCcctttcctctacccact-ccagccttactacccctaacgtcccgcaccccaggaaacaccagattctgcctc--tacctccgag--ctctttccc-ctgttctcactgccctgggtcagccctttgc-gggag-ctcctctttcccctcttgatttattatcatccggctaacctctaatcctgtaagatttagctcgaatctctttcgagaagtattttctgaatccaaggaggacctaaaagcca-ttctgctggcctcccagagct-gaatct-cc- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192449213 337 - 192460366 TCGTTCCCTTTTCCCTGCTCCTATT--TGTTTCCCTCAGTTCCGCCTAATACCCCGG-GGTGTCACCCTAGCcctttcctctacccact-ccagccttactacccctaacgtcctgcaccccaggaaacaccagattctgcctc--tacctccgag--ctcttttcc-ctgttctcactgccctgggtcagccctttgc-gggag-ctcctctttcccctcttgatttattatcatccggctaacctctaatcctgtaagatttagctcgaatctctttcgagaagtattttctgaatccaaggaagacctaaaagcca-ttctgctggcctcccagagcT-GAATCT-CC- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19188144 335 - 19675229 TCGGTTCCCTTTCCCTGCTCCTAT-----GTTTCCTCAGTTCCGCCTAATACCCCGG-GGAGTTCACCTAGCCCTTTCCTCTACCCACTCCCAGCCTTACTACCCCTAACGTCCCGCACCCCAGGAAACACCAGATTCTGCCTC--TACCTCCGAGACTTCTTTCCC-CTGTTCTCACTGCCCT-GGTCAGCCC-TTGC-GGGAGCCTCCTCTTTCCCCTCTTGATTTATTATCAT-CGGCTAACCTCTAATCCTGTAAGA-TTAGCTCGAATCTC-TTCGAGAAGTATTTTCTGAATCAAGAAAGGACCTAAAAGCCA-TTCTGCTGGCCTCCCAGAGCTCGAATCTCCC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16429050 337 - 16847902 TCGTTCCCTTTTCCCTGCTCCTATT--TGTTTCCCTCAGTTCCGCCTAATACCCCGT-GGTGTCACCCTAGCcctttcctctacctgct-ccagccttactacccccaacgtcccgcaccccaggaaacaccagattctgcctc--tacctccgag--ctctttccc-ctgttctcactgccctgggtcagccctttgc-gggag-ctcctctttcctctcttgatttattgtcatccggctaacctctaatcctgtaagatttagctcgaatctctttcgagaagtattttctgaatccaaggaggacctaaaagcca-ttctgctggcctcccagagcT-GAATCT-CC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91393603 339 + 91754291 tcattcccttttccctgctcctatT--TGTTTCCCTCAGTTCCGCCTAATACCCTGT-GGTGTCACCCTAGCCCTTTCCTCTACCCGCT-CCAGCCTTACTTTCCCCAACATCCTACACCCCGGGAAAAACCAAATTCTGCCTCCGTACCTCCGAG--CTCTTTCCC-CTGTTCTCACTGCCCTGGGTCAGCCCTTTGC-GGGAG-GTCCTATTTCCTCTCTTGATTTATTATCATCCAGCTAACCTCTAATCCTGTAAGATTTAGCTCGAATCTCTTTCGAGAAGTATTTTCTGAATCCAAGGAAGACCTAAAAGTCA-TTCTGCTGGCCTCCCGGAGCT-GAATCT-TC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1466471 337 + 1977891 tcgttcccttttccctgctccTATT--TGTTTCCCTCAGTTCCGCCTAATACCCCGT-GGTGTCACCCTAGCGctttcctctacccgct-ccagccttactatccccaacgtcccgcaccccaggaaacaccagattctgcctc--tacctccgag--ctctttccc-ctgttctcactgccctgggtcagccctttgc-gggag-ctcctctttcctctcttgatttattgtcatccggctaacctcgaatcctgtaagatttagctcgaatctcttgcgagaagtattttctgaatccaaggaggacctaaaagcca-ttctgctggcctcccagagcT-GAATCT-CC- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7400395 338 - 7796314 tcattcccttttccctGCTCCTATT--TGTTTCCCTCAGTTCCGCCTAATACCCTGT-GGTGTCACCctagccctttcctctacccgct-ccagccttactacccccaatgtcccgcacgccgggaaacaccagattctgcctc-gtacttccgag--ctctttccc-ccattctcactgccctgggtcagccctttgc-gggag-ctcctcttgcctctcttgatttattatcatccggctaacctctaatcctgtaagatttagcttgaatctctttcgagaagtattttctgaatccaaggaggacctaaaagcca-ttctgctggcctcccagagcT-GAATCT-CC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73900735 312 + 74750902 TTATTCCCTTTTCGC-GCCCCCGTTTCTGTTTCCCTCAGCTCCACCTAAtgccccatgggtgtcgccccagccctttcctccacccgct-gcagccttactgtccccaacgtcctacactc-gggaatcaccaaa-tctgcctctttacctccaag--ctctttcccgct----------------gtcaggcctttgc-a-gag-cccctgtttcctctcttggtttattttcatccagcttacctctaatcctgtaagatttagctcaaatctctttagagaagtattttctgaatccaaggaggacctaaaagcca-ttctgcccatctcacact-------------- i calJac3.chr17 I 316 C 0 s saiBol1.JH378146 17331983 329 - 17725628 ttattcccctttccctgcccctatttctGTTTCCCTAAGCTCCACCTAATACCCCACGGGTGTCGCCCCAGCCC-TTCCCCCACCTGCT-GCAGCCTTACCATCCCCAACGTCCCTCACTCTGGGAATCACCAAA-TCTGCCTCTTTACCTCCAAG--CTCTTTCCCGCTGTTCCCATTGCCCTGGGTCAGCCCCTTGC-AGGAG-CCCCTGTTTCCTCTCTTGATTTATTTTCATCTAGCTAACCTCTAATCCTGTAAGA-TTAGCTCAAATCTCTTTAGAGAAGTATTTTCTGAATCCAAGGAGGACCTAAAAGTCA-TTCTGCTCATCTCACTCG-------------- i saiBol1.JH378146 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I a score=285640.000000 s hg38.chr3_KI270934v1_alt 99144 67 + 163458 catctc-------------ccccggattataTTAAAATTATAAGTCATGTAAAATCCTTTTGGAACGA-GACAGGGTATGA s gorGor5.CYUI01000576v1 45276 67 - 106623 catctt-------------ccccggattataTTAAAAttataagtcatttaaaatccttttggaacga-gacagggtatga i gorGor5.CYUI01000576v1 C 0 I 1 s rheMac8.chr2 2383275 79 - 204787373 catctcacgcttac-ccctccctggattatattaaaattatAAGTCATTTAAAATCCTTTTGGAACAA-GACAGGGTATGA i rheMac8.chr2 C 0 I 1 s macFas5.chr2 192449550 79 - 192460366 CATCTCACGCTTAC-CCCTCCCCGGATTATATTAAAATTATAAGTCATTTAAAATCCTTTTGGAACAA-GACAGGGTATGA i macFas5.chr2 C 0 I 1 s macNem1.NW_012014355v1 19188479 80 - 19675229 CATCTCACGCTTAC-CCTCCACCGGATCATATTAAAATTATAAGTCATTTAAAATCCTTTTGGAACAAGGACAGGGTATGA i macNem1.NW_012014355v1 C 0 I 75 s cerAty1.NW_012004056v1 16429387 79 - 16847902 CATCTCACGCTTAC-CCCTCCCCGGATTATCTTAAAATTATAAGTCATTTAAAATCCTTTTGGAACAA-GACAGGGTATGA i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 91393942 79 + 91754291 CATCTCACGCCTAC-CCCTCCCCGGATTACATTAAAATTATAAGTCATTTAAAATCCTTTTGGAACAA-GACAGGGTATGA i chlSab2.chr15 C 0 I 1 s manLeu1.NW_012102020v1 1466808 79 + 1977891 CATCTCACGCTTAC-CCCTCCCCGGATTATCTTAAAATTATAAGTCATTTAAAATCCTTTTGGAACAA-GACAGGGTATGA i manLeu1.NW_012102020v1 C 0 I 1 s colAng1.NW_012118932v1 7400733 79 - 7796314 CATCTCACGCTTGC-CCCTCCCCGGATTATATTAAAATTATAAGTCATTTAAAATCCTTTTGGAACAA-GACAGGGTATGA i colAng1.NW_012118932v1 C 0 I 1 s calJac3.chr17 73901047 67 + 74750902 -------------cacccctcccagattatattaatatcataagtcattttaaatctttttggcacaa-gacagggtacga i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 17332312 64 - 17725628 -------------C-CCCTCCCCAGATTATATTAATATCACAAGTCATTTTAAATCCTTTTGGTACAA-GAC--GATATGA i saiBol1.JH378146 C 0 I 1 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=223528.000000 s hg38.chr3_KI270934v1_alt 99211 68 + 163458 TAAATAAGAAATATTCAACAAGTATACGTTACTTGTGTACACATACCACCTGACTTCTTTAACAACAC s gorGor5.CYUI01000576v1 45344 68 - 106623 taaataaGAAATATTCAACAAGTATATGTTACTTGTGTACACATACCACCTGACTTCTTTAACAACAC i gorGor5.CYUI01000576v1 I 1 C 0 s rheMac8.chr2 2383355 68 - 204787373 TAAAAAAGAAATACTCAATAACTGAACATTATTTGTGTACacatactacttgatttctttaacaatac i rheMac8.chr2 I 1 C 0 s macFas5.chr2 192449630 68 - 192460366 TAAAAAAGAAATACTCAATAACTGAACATTATTTGTGTACacatactacttgatttctttaacaatac i macFas5.chr2 I 1 C 0 s cerAty1.NW_012004056v1 16429467 68 - 16847902 TAAAAAAGAAATACTCAATAACTGAACATTATTTGTGTACacatactacttgatttctttaacaatac i cerAty1.NW_012004056v1 I 1 C 0 s chlSab2.chr15 91394022 68 + 91754291 TAAAAAAGAAATACTCAATAACTGAACGTTATTTGTGTACacatactacctgatttcttttacaatac i chlSab2.chr15 I 1 C 0 s manLeu1.NW_012102020v1 1466888 68 + 1977891 TAAAAAAGAAATACTCAATAACTGAACATTATTTGTGTACacatactacttgatttctttaacaatac i manLeu1.NW_012102020v1 I 1 C 0 s colAng1.NW_012118932v1 7400813 60 - 7796314 TAAAAAAGAAAT--------ACTGAACGTTATTTGTGTACacatactacctgatttctttgacaatac i colAng1.NW_012118932v1 I 1 C 0 s calJac3.chr17 73901115 68 + 74750902 taaacaaGAAGTACTCAATAATTGCATGTTATTTGCGTACACACACCACCTGATTTCTTTAACGACAC i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 17332377 68 - 17725628 CAAACAAGAAATACTCAATAGTTGCATGTTATTTGTGTACacataccacctgatttctttaacaatac i saiBol1.JH378146 I 1 C 0 e macNem1.NW_012014355v1 19188559 75 - 19675229 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=115870.000000 s hg38.chr3_KI270934v1_alt 99279 25 + 163458 ATTGCAAGAAATAAAAAGATGGAGA s gorGor5.CYUI01000576v1 45412 25 - 106623 ATTGCAAGAAATAAAAAGATGGAGA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2383423 25 - 204787373 attgcaagaaataaaaagatggaga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192449698 25 - 192460366 attgcaagaaataaaaagatggaga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19188634 25 - 19675229 ATTGCAAGAATAAAAAGAATGGAGA i macNem1.NW_012014355v1 I 75 C 0 s cerAty1.NW_012004056v1 16429535 25 - 16847902 attgcaagaaataaaaagatggaga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91394090 25 + 91754291 attgcaagaaataaaaagatggagg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1466956 25 + 1977891 attgcaagaaataaaaagatggaga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7400873 25 - 7796314 attgcaagaaataaaaagatggagA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73901183 25 + 74750902 ATTGCAAGaaataaaaagacggaca i calJac3.chr17 C 0 I 4 s saiBol1.JH378146 17332445 25 - 17725628 atcgcaagaaataaaaagatggaga i saiBol1.JH378146 C 0 N 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=14940.000000 s hg38.chr3_KI270934v1_alt 99304 4 + 163458 CATA s gorGor5.CYUI01000576v1 45437 4 - 106623 CATA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2383448 4 - 204787373 ccta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192449723 4 - 192460366 cata i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19188659 4 - 19675229 CATA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 16429560 4 - 16847902 cata i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91394115 4 + 91754291 cata i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1466981 4 + 1977891 cata i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7400898 4 - 7796314 CATA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73901212 4 + 74750902 cata i calJac3.chr17 I 4 N 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=503648.000000 s hg38.chr3_KI270934v1_alt 99308 178 + 163458 Cggctgggcgcagtggctaatgcctgt--aatc-ccagcactttgggag-gccaaggcaggtggatca-ctgaggtcaggagttcgac-accagcctggccaacatggtgaaacccccatctctac--taaaaatacaaaaattagccaagtgtggtggcagg-ca-cctgtaatcccagctactcgg s gorGor5.CYUI01000576v1 45441 178 - 106623 Tggctgggcgcagtggctcacgcctgt--aatc-ccagcactttgggag-gccaaggcaggtggatca-ctgaggtcaggagttcgag-accagcctgcccaacatggtgaaa-ccccatctctac--taaaaatacaaaaattagccaagtgtggtggcaggcca-cctgtaatcccagctactcgg i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2383452 176 - 204787373 tggctgggcgcggtggctcacgcctgt--aatc-gcagca-cttgggag-gccgaggcgggtggatcacctgaggtcaggagtttgag-accagcctggccaacatggtgaaa-ccccgtctctac--taaaaatacaaaacttagccgggtgtggtggc-gg-cg-cctgtagtcccagcttctcgg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192449727 176 - 192460366 tggctgggcgccgtggctcacgcctgt--aatc-gcagca-cttgggag-gccgaggcgggtggatcacctgaggtcaggagtttgag-accagcctggccaacatggtgaaa-ccccgtctctac--taaaaatacaaaacttagccgggtgtggtggc-gg-cg-cctgtagtcccagcttctcgg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 19188663 185 - 19675229 Tggctgggcgcggtggcgcacgccagttaaatcggcagcaccttgggagagccgaggcgggtggatcacctgaggtcaggagtttgagaaccagcctggccaacatggtgaaa-ccccgtctctacaataaaaatacaaaacttagccgggtgtggtggc-gg-cgacctgtagtcccagcttctcgg i macNem1.NW_012014355v1 C 0 N 0 s cerAty1.NW_012004056v1 16429564 176 - 16847902 tggctgggcgcggtggcccacgcctgt--aatc-gcagca-cttgggag-gccgaggcgggtggatcacctgaggtcgggagtttgag-accagcctggccaacatggtgaaa-ccccgtctctac--taaaaatacaaaacttagccgggtgtggtggc-gg-cg-cctgtagtcccagcttctcag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91394119 177 + 91754291 tggctgggcgcagtggctcacgcctgt--aatc-gcagca-cttgggag-gccgaggcgggtggatcacctgaggtcaggagtttgag-accagcctggccaacatggtgaaa-ccccgtctctac--taaaaatacaaaaattagccgggtgtggtggcggg-tg-cctgtaatcccagcttctcgg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 1466985 176 + 1977891 tggctgggcgcggtggctcacgcctgt--aatc-gcagca-cttgggag-gccgaggcgggtggatcacctgaggtcgggagtttgag-accatcctggccaacatggtgaaa-ccccgtctctac--taaaaatacaaaacttagctgggtgtggtggc-gg-cg-cctgtagtcccagcttctcag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7400902 177 - 7796314 Tggccgggcgcggtggctcacgcctgt--aatc-ccagca-cttgggag-gccgaggcgggtggatcacctgaggtcaggagtttgag-agcagcctggccaacatgctgaaa-ccccgtctctac--taaaaatacaaaaattagccgggtgtggtggcagg-cg-cctgtaatcccagcttctcgg i colAng1.NW_012118932v1 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=302716.000000 s hg38.chr3_KI270934v1_alt 99486 117 + 163458 aaggctgaggcaggagaatctcttgaacccggaatgcggagcttgcagtcaagcaagattatgccactgcactccagcctgggtgacacagcaagactccatctcaaaaaaaaaaaa s gorGor5.CYUI01000576v1 45619 114 - 106623 aaggctga-gcaggagaatctcttgaacctggaatgcggagcctgcagtcaagcaagattatgctactgcactccagcctgggtgacacagcaagactccatctc--aaaaaaaaaa i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2383628 117 - 204787373 gaggctgaggcagcagaatctcttgaacccgggaggaggaggttgtagtgagccaagaccgcaccactgctctccagcctgggtgacagagtgagactccatctcaaaaaaaaaaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192449903 117 - 192460366 gaggctgaggcagcagaatctcttgaacccgggaggaggaggttgtagtgagccaagaccgcaccactgctctccagcctgggtgacagagtgagactccgtctcaaaaaaaaaaaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012013899v1 44699 117 + 100774 aaggccgaggcaggagagtggcgggaacctgggaggcggagcttgcagtgagccaagatggcgccactggactccagcctccctgacagagcgagactccatctccaaaaagaaaag i macNem1.NW_012013899v1 N 0 C 0 s cerAty1.NW_012004056v1 16429740 117 - 16847902 gaggctgaggcaggagaatctcttgaacccgggaggaggaggttgtagtgagccaagaccgcaccactgctctccagcctgggtgacagagtgagagtccatctcaaaaaaaaaaaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 91394296 117 + 91754291 aagtctgaggcaggagaatctcttgaacccgggaggaggaggttgtagtgagccaagatcgcaccactgctctctagcctgggtgacagagtgagagtccatctcaaaaaaaaaaaa i chlSab2.chr15 C 0 N 0 s manLeu1.NW_012102020v1 1467161 117 + 1977891 gaggctgaggcaggagaatctcttgaacccgggaggaggaggttgtagtgagccaagaccgcaccactgctctccagcctgggtgacagagtgagagtccatctcaaaaaaaaaaac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7401079 116 - 7796314 aagtctgaggcaggagaatctcttgaaccc-ggaggaggaggttgtagtgagccgagatcgcaccactgctctccagcctgggtgacagagcgagagtccatctcaaaaaaaaaaaa i colAng1.NW_012118932v1 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=15179.000000 s hg38.chr3_KI270934v1_alt 99603 7 + 163458 aaaaaga s gorGor5.CYUI01000576v1 45733 7 - 106623 aaaaaga i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2383745 7 - 204787373 aaaaaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192450020 7 - 192460366 aaaaaaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012013899v1 44816 7 + 100774 gaaaaaa i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004056v1 16429857 7 - 16847902 aaaaaga i cerAty1.NW_012004056v1 C 0 N 0 s manLeu1.NW_012102020v1 1467278 7 + 1977891 aaaaaaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7401195 7 - 7796314 aaaaaaa i colAng1.NW_012118932v1 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=3090.000000 s hg38.chr3_KI270934v1_alt 99610 2 + 163458 aa s gorGor5.CYUI01000576v1 45740 2 - 106623 aa i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2383752 2 - 204787373 aa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192450027 2 - 192460366 aa i macFas5.chr2 C 0 C 0 s macNem1.NW_012013899v1 44823 2 + 100774 ga i macNem1.NW_012013899v1 C 0 C 0 s manLeu1.NW_012102020v1 1467285 2 + 1977891 aa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 7401202 2 - 7796314 aa i colAng1.NW_012118932v1 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=910.000000 s hg38.chr3_KI270934v1_alt 99612 1 + 163458 a s gorGor5.CYUI01000576v1 45742 1 - 106623 a i gorGor5.CYUI01000576v1 C 0 C 0 s cerAty1.NW_012004452v1 4224 1 - 218577 a i cerAty1.NW_012004452v1 N 0 C 0 s manLeu1.NW_012102020v1 1467287 1 + 1977891 a i manLeu1.NW_012102020v1 C 0 N 0 s colAng1.NW_012118932v1 7401204 1 - 7796314 a i colAng1.NW_012118932v1 C 0 C 0 e macNem1.NW_012013899v1 44825 0 + 100774 C e macFas5.chr2 192450029 0 - 192460366 C e rheMac8.chr2 2383754 0 - 204787373 C e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=2548.000000 s hg38.chr3_KI270934v1_alt 99613 1 + 163458 a s gorGor5.CYUI01000576v1 45743 1 - 106623 a i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2383754 1 - 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192450029 1 - 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012013899v1 44825 1 + 100774 a i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 4225 1 - 218577 a i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 33083 1 + 74206 a i manLeu1.NW_012101728v1 N 0 C 0 s colAng1.NW_012118932v1 7401205 1 - 7796314 a i colAng1.NW_012118932v1 C 0 N 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=2412.000000 s hg38.chr3_KI270934v1_alt 99614 2 + 163458 ga s gorGor5.CYUI01000576v1 45744 2 - 106623 ga i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2383755 2 - 204787373 aa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192450030 2 - 192460366 aa i macFas5.chr2 C 0 C 0 s macNem1.NW_012013899v1 44826 2 + 100774 aa i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 4226 2 - 218577 ga i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 33084 2 + 74206 ga i manLeu1.NW_012101728v1 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=2548.000000 s hg38.chr3_KI270934v1_alt 99616 1 + 163458 a s gorGor5.CYUI01000576v1 45746 1 - 106623 a i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2383757 1 - 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192450032 1 - 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012013899v1 44828 1 + 100774 a i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 4228 1 - 218577 a i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 33086 1 + 74206 a i manLeu1.NW_012101728v1 C 0 C 0 s dasNov3.JH577625 332601 1 - 913073 A i dasNov3.JH577625 N 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=3276.000000 s hg38.chr3_KI270934v1_alt 99617 1 + 163458 a s gorGor5.CYUI01000576v1 45747 1 - 106623 a i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 2383758 1 - 204787373 a i rheMac8.chr2 C 0 N 0 s macFas5.chr2 192450033 1 - 192460366 a i macFas5.chr2 C 0 I 1 s macNem1.NW_012013899v1 44829 1 + 100774 a i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 4229 1 - 218577 a i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 33087 1 + 74206 a i manLeu1.NW_012101728v1 C 0 C 0 s otoGar3.GL873745 2103745 1 - 2165740 A i otoGar3.GL873745 N 0 C 0 s dasNov3.JH577625 332602 1 - 913073 A i dasNov3.JH577625 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=1452.000000 s hg38.chr3_KI270934v1_alt 99618 3 + 163458 aag s gorGor5.CYUI01000576v1 45748 3 - 106623 aag i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 192450035 2 - 192460366 -ga i macFas5.chr2 I 1 C 0 s calJac3.chr2 204139828 3 + 204313951 AAA i calJac3.chr2 N 0 C 0 s otoGar3.GL873745 2103746 3 - 2165740 AAG i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 332603 3 - 913073 AGA i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 44830 0 + 100774 C e manLeu1.NW_012101728v1 33088 0 + 74206 C e cerAty1.NW_012004452v1 4230 0 - 218577 C e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=23255.000000 s hg38.chr3_KI270934v1_alt 99621 11 + 163458 aaaaaaCACCA s gorGor5.CYUI01000576v1 45751 11 - 106623 aaaaaACACCA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179818909 9 - 180051392 --aaaaCACCC i rheMac8.chr6 N 0 C 0 s macFas5.chr2 192450037 11 - 192460366 tggagacacac i macFas5.chr2 C 0 N 0 s macNem1.NW_012013899v1 44830 6 + 100774 -----aCACCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 4230 9 - 218577 --aaaaCACTC i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 33088 9 + 74206 --aaaaCACTC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204139831 11 + 204313951 GAAAAACACCG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16282865 11 + 16417988 AAAGAACACCC i saiBol1.JH378155 N 0 C 0 s aotNan1.NW_018494784v1 114102 11 - 211231 AAAGAACACCC i aotNan1.NW_018494784v1 N 0 C 0 s otoGar3.GL873745 2103749 10 - 2165740 AAAAAGCAAC- i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 332606 11 - 913073 AAAAAATCCCC i dasNov3.JH577625 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=26530.000000 s hg38.chr3_KI270934v1_alt 99632 10 + 163458 TGCATGCATA s gorGor5.CYUI01000576v1 45762 10 - 106623 TGCATGCATA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179818918 10 - 180051392 TGCGTGCATA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 44836 10 + 100774 TGCGTGCATA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 4239 10 - 218577 TGCGTGCATA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 33097 10 + 74206 TGCGTGCATA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204139842 10 + 204313951 TGCATGCACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16282876 10 + 16417988 TGCATGCACC i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 114113 10 - 211231 TGCATGCGCA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2103759 10 - 2165740 TGCATACCTG i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 332617 5 - 913073 CACAT----- i dasNov3.JH577625 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=232458.000000 s hg38.chr3_KI270934v1_alt 99642 55 + 163458 CTCATATGAATGTACAAATGGATGAGTCTAG---AACAAAAGATACTAGCCTGATACA s gorGor5.CYUI01000576v1 45772 55 - 106623 CTCATATGAATGTACAAATGGATGAGTCTAG---AACAAAAGATACTAGCCTGATACA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179818928 55 - 180051392 CTCATACGAATGCACAAATGGATGTGTCTAG---AACAAGAGATACTGGCCTGATATA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 44846 55 + 100774 CTCATACGAATGCACAAATGGATGTGTCTAG---AACAAGAGATACTGGCCTGATATA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 4249 55 - 218577 CTCATACGAATGCACAAATGGATGTGCCTAG---AACAAGAGATACTGGCCTGATATA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 33107 55 + 74206 CTCATACGAATGCACAAATGGATGTGCCTAG---AACAAGAGATACTGGCCTGATATA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204139852 55 + 204313951 CCCATGTCAATGTCCAAATGGGCGAGTCTAG---AACAAGAAATACTGGCCTGATACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16282886 55 + 16417988 CTCATGTCAATGTCCAAATGGGTGAGTCTAG---AACAAGAGATACTGGCCTGATACA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 68677 55 - 306014 CTCATGTCAATGTCCAAATGGGCGAGTCTAG---AACAAGAGATACTGGCCTGATACA i cebCap1.NW_016108150v1 N 0 I 56 s aotNan1.NW_018494784v1 114123 55 - 211231 CTCATGTCAATGTTCAAATGGGCGAGTCTAG---AACAAGAGATACTGGCCTCATACA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2103769 58 - 2165740 CCCATCTGAACGTAGAGATAATTGAGTCTAGAAAAACAAAAGATACTGGCCTGATACA i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 332622 50 - 913073 ---ATATAAACGTATAAATGGACGAATTTAG---GAGGTGAGAGATTGGCCTGCCC-- i dasNov3.JH577625 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=23599.000000 s hg38.chr3_KI270934v1_alt 99697 7 + 163458 TATACAA s gorGor5.CYUI01000576v1 45827 7 - 106623 TATACAA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179818983 7 - 180051392 TACACCA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 44901 7 + 100774 TACACAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 4304 7 - 218577 TACACAA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 33162 7 + 74206 TACACAA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204139907 7 + 204313951 TACACAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16282941 7 + 16417988 TACACAA i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 114178 7 - 211231 TACACAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2103827 7 - 2165740 TTCACAA i otoGar3.GL873745 C 0 C 0 e dasNov3.JH577625 332672 0 - 913073 C e cebCap1.NW_016108150v1 68732 56 - 306014 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=94651.000000 s hg38.chr3_KI270934v1_alt 99704 33 + 163458 ACTATGCAGCTGCAGTCCCTGCCTCTTCCGCAA s gorGor5.CYUI01000576v1 45834 33 - 106623 ACTATGCAGCTGCAGTCCCTGCCTCTTCTGCAA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179818990 33 - 180051392 ACTATGCAGCTGCAGTCCACGCCTCTTCCGCAA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 44908 33 + 100774 ACTATGCAGCTGCAGTCCACGCCTCTCCCGCAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 4311 33 - 218577 ACTATGCAGCTGCAGTCCACGCCTCTTCCGCAA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 33169 33 + 74206 ACTATGCAGCTGCAGTCCACGCCTCTTCCGCAA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204139914 31 + 204313951 AC--CGCAGCTGCAGTCCCTGCCTTTTCCGCAA i calJac3.chr2 C 0 I 420 s saiBol1.JH378155 16282948 32 + 16417988 CCCACGCAGCTGCCGT-CCTGCCTTTTCCGTAA i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 114185 33 - 211231 ACCACGCAGCTGCAGTCCCTGCCTTTTCCGCAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2103834 31 - 2165740 AC--TGCAGCTTCAGGCCTTTCCTTTACTGCAA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11931147 33 + 42124431 actaaaccgctgcgccacccagggatcccTCAG i canFam3.chr34 N 0 C 0 s dasNov3.JH577625 332672 27 - 913073 ------CAGCTGACTGGCTTACCTCTCAGGAAC i dasNov3.JH577625 C 0 C 0 e cebCap1.NW_016108150v1 68732 56 - 306014 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=17146.000000 s hg38.chr3_KI270934v1_alt 99737 10 + 163458 CCCTGACCTC s gorGor5.CYUI01000576v1 45867 10 - 106623 CCCTGACCTC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179819023 10 - 180051392 CCCTGCCCTC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 44941 10 + 100774 CCCTGCCCTC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 4344 10 - 218577 CCCTGCCCTC i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 33202 10 + 74206 CCCTGCCCTC i manLeu1.NW_012101728v1 C 0 C 0 s saiBol1.JH378155 16282980 5 + 16417988 --CCGAC--- i saiBol1.JH378155 C 0 I 2 s aotNan1.NW_018494784v1 114218 7 - 211231 --CCGGCCG- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2103865 10 - 2165740 CCATGATCTC i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11931180 10 + 42124431 CCCTGATTTC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 332699 10 - 913073 CCCTAGCTTC i dasNov3.JH577625 C 0 I 5 e calJac3.chr2 204139945 420 + 204313951 I e cebCap1.NW_016108150v1 68732 56 - 306014 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=45279.000000 s hg38.chr3_KI270934v1_alt 99747 16 + 163458 TAAGAA-----AGCTCTAACT s gorGor5.CYUI01000576v1 45877 16 - 106623 TAAGAA-----AGCTCTAACT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179819033 16 - 180051392 TAAGAA-----ACCTCTAGCT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 44951 16 + 100774 TAAGAA-----ACCTCCAGCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 4354 16 - 218577 TAAGAA-----ACCTCTAGCT i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 33212 16 + 74206 TAAGAA-----ACCTCTAGCT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204140365 16 + 204313951 TAAGGA-----GCCTCCAGCC i calJac3.chr2 I 420 C 0 s saiBol1.JH378155 16282987 16 + 16417988 GAAGGA-----GCCCCCAGCC i saiBol1.JH378155 I 2 C 0 s aotNan1.NW_018494784v1 114225 16 - 211231 TAAGGA-----GCCTCCAGCC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2103875 16 - 2165740 TAAGGA-----ATCTCTAGCT i otoGar3.GL873745 C 0 I 6 s canFam3.chr34 11931190 16 + 42124431 TAATGA-----GCCACTGGCT i canFam3.chr34 C 0 I 8 s dasNov3.JH577625 332714 18 - 913073 TGAGCATGAGCACTGCTG--- i dasNov3.JH577625 I 5 C 0 e cebCap1.NW_016108150v1 68732 56 - 306014 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=700218.000000 s hg38.chr3_KI270934v1_alt 99763 214 + 163458 CTGAAT----CCTGT-----------CAGCACCTGGG-----------CTGTGCTGC-TTGGGACAACATTGTCTTCAC-AAGTCCTCTCCACATTCTCAGA--GGTGGGGGTATTGCCAATGATGGGG--GTTACTGCCT-GAGTCCCGTCACCA--------GGGGACA--AAGCTACAGCAGACACCACCATCT-GCCAACAAAAAGA--GAGATCATCTCCCACCCctggttctgctgacgcaatcactggaagca s gorGor5.CYUI01000576v1 45893 213 - 106623 CTGAAT----CCTGT-----------CAGCACCTGGG-----------CTGTGCTGC-TTGGGACAACATTGTCTTCAC-AAGTCCTCTCCACATTCTCAGA--GGTGGGGGTATTGCCAATGATGGGG--GATGCTGCCT-GAGTCCCGTCACCA---------GGGACA--AAGCTACAGCAGAGACCACCATCT-GCCAACAAAAAGA--GAGATCATCTCCCACCCctggttctgctgacgcaatcactggaagca i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179819049 212 - 180051392 CTGAAT----CCTGT-----------CAGCACATGGG-----------CCGTGCTG--GTGGGACAACATTGTCTTCAC-AAGTGCTCTCCACATTCTCAGA--GGCGGGGGTTTTGCCATTGATGGGG--GATGCTGCCT-GAGTCCCGTCACCA---------GGGACA--AAGCTACAGCGGAGACCACCATCT-GCCAACAAAAAGA--GAGACCATCTCCCACCCCTGGTTCTGCTGACCCAATCACTGGAAGCA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 44967 212 + 100774 CTGAAT----CCTGT-----------CAGCACGTGGG-----------CTGTGCTG--GTGGGACAACATTGCCTTCAC-AAGTGCTCTCCACATTCTCAGA--GGCGGGGGTTTTGCCATTGATGGGG--GATGCTGCCT-GAGTCCCGTCACCA---------GGGACA--AAGCCACAGCGGAGACCACCATCT-GCCAACAAAAAGA--GAGACCATCTCCCACCCCTGGTTCTGCTGACCCAATCGCTGGAAGCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 4370 213 - 218577 CTGAAT----CCTGT-----------CAGCACCTGGG-----------CTGTGCTGC-GTGGGACAACATTGTCTTCAC-AAGTCCTCTCCACATTCTCAGA--GGCGGGGGTTTTGCCATTGATGGGG--GATGCTGCCT-GAGTCCCGTCACCA---------GGGACA--AAGCTACAGCGGAGACCACCATCT-GCCAACAAAAAGA--GAGATCATCTCCCACCCctggttctgctgacccaatcactggaagca i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 33228 213 + 74206 CTGAAT----CCTGT-----------CAGCACCTGGG-----------CTGTGCTGC-GTGGGACAACATTGTCTTCAC-AAGTCCTCTCCACATTCTCAGA--GGCGGGGGTTTTGCCATTGATGGGG--GATGCTGCCT-GAGTCCCATCACCA---------GGGACA--AAGCTACAGCGGAGACCACCATCT-GCCAACAAAAAGA--GAGATCATCTCCCACCCctggttctgctgacccaatcactggaagca i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204140381 210 + 204313951 CTGAAT----CCTGT-----------TGGCACCTGGG-----------CTGTGCTGT-GTGGGACAACACTTTCTTCCCCAAGTCCTCTCCACATTCTCAAA--GGTGGGGGTACTGCCACTGATGGGG--GATTCTGCCT-GAGTCCTGTCCCCA--------GGGGGCG--AGGCTGCAGCGGAAACCACCATCT-GCCAACAAAA------AGCTCACCTCCCAGCCCTGGTTCTGCAGACTGAATCACTGG-AGCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16283003 190 + 16417988 CTGAAT----CCTGT-----------CAGCGCCTGGG-----------CTGTGCTGC-ATGGCACAACGCTGTCCTGTCCGAGTCCTCTCCACATTCTCAGA--GGTGGGGGTACTGCCACTG-------------------GAGTCCTGTCCCCA---------CGGGCA--AGGCTACAGCGGAAACCAC---CT-GCCAACAAAA------AGCTCACCTCCCAGCCCTGGTTCTGTTGATGGAGTCACTGG-AGCA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 68788 206 - 306014 CTGAAT----CCTGT-----------CAGCGCCTGGG-----------CTGTGCTGC-ATGGGACGGCACTGTCTTCCCCAAGTCTTCTCCACATTCTCAGA--GGTGAGGGTGCTGCCACTGATGGGG--G-TGCTGCCT-GAGTCCTGTCTCCA--------GGGGGCA--AGGCTACAGCGGAAACCAC---CT-GCCAACAAAA------AGCTCACCTCCCAGCCctggttctgctgacggaatcactgg-agca i cebCap1.NW_016108150v1 I 56 C 0 s aotNan1.NW_018494784v1 114241 210 - 211231 CTGCAT----CCTGT-----------CAGCGCCTGGG-----------CTGTGCTGC-GTGGGACAGCACTGTCTTCCCTGAGTCCTCTCCACACTCTCAGA--GGTGGGGCTGCTGCCACTGATGGGG--GACGCTGCCT-GAGTCCTGTCCCCA--------GGGGGCA--AGGCTACAGCGGAAACCACCGTCT-GCCAACAAAA------CGCTCACCTCCCAGCCctggttctgctgactgaatcactgg-agca i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2103897 171 - 2165740 CTTCAT----CCTGT-----------TGGCTTTTGGG-----------TTATGGTGCTAGGGGACAACCTTAT-------GAGTCCTCTCCATAGTTTTG------------------------------------TGCCT-GGGTCCTGTCACCACCT-ACAAAGGTGCAGGAAGGTACAATGGAGACCGC-----------CAGAAAGG--CAGGtcatct---ggctctgg--ctgctgaatcaactaaatgaagcg i otoGar3.GL873745 I 6 C 0 s canFam3.chr34 11931214 227 + 42124431 CTGCATGGAACAGGTCGGGTGGGGCACAGCACCTGGG-----------CCATACTGC-TAGGGCAGGCCTAAGCCTTG--GGGTCCTCTCAGT---------------GAATTGCTGCCATTGGTGGGGACGGTGTTGCCTGGAGTCCTGTGGCCTCATGGCAGAGATGCG--CAGCCACAGGGGAGACCGTCTCCTCGCCAGCAGAAAGATGCAGCCTAGCCCCTg--cctagttctacagactcaatcacttaaagta i canFam3.chr34 I 8 C 0 s dasNov3.JH577625 332732 232 - 913073 CTGGGT----CAGCT-----------CATCCCCAAAGGAAAACTGGCCCCGTGCTG--GTCTGCCATGATGAACATATCTGAGTCCTTTCTGTGGTCCTTGAATGGGGGGTGTGTTGCCACTGATGTGA--CCTTCTG----GGGTCCTGTTGCCACCTTACAAAGACGTG--CAGAGATGGCAGAGAGCAGCACAT-GCCAGCAGAAAGAGGCGGAGCATCTCCCTCCCCTGCTCAT--TGACTCAGtcctgtaaagct i dasNov3.JH577625 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=992171.000000 s hg38.chr3_KI270934v1_alt 99977 207 + 163458 -tcgaggca----ccactatgt-----cctcacc--tgcctc-ggattcaatttcctcctagccaggtctgttctaaggtctcca--------------------------gaagttgagaaattaattgaaagataaca------ctt--tcctccctgtgttaaggtttatcacataatgtatccaaatact-gggccagtctttcctttggtctcat------------ttctatgagctaatctg-----aaaatgccttttctgttt s gorGor5.CYUI01000576v1 46106 208 - 106623 -ccgaggca----ccactatct-----cctcatc--tgcctc-ggattcaattttctcctagttaggtctgttctaagctctcca--------------------------gaagttgagaaattaattgaaagataaca------ctt--tcctccctgtgttaaggtttatcacataatgtatccaaatactggggccagtctttcctttggtctcat------------ttctatgagctaatctg-----aaaatgccttttctgttt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179819261 199 - 180051392 -TCCAGGCA----CCGCGAT--------CTCACC--TGCCTC-CGATTCCGTTTCCTCCTAGCCAGGTCTGTTCTAAGCTTTCCA--------------------------GAAGTGGAGAAATTAACTGAAAGAGAACA------CTT--TCCTCCCTGTGTTAAGGTTAATCACATAATGGATCCAAATACT-GGGTCAGTCTTTACTGTGGTCTCAT------------TTCT-----CTAATTTG-----AAAATGCCTTTTCTGTTT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 45179 199 + 100774 -TCCAGGCA----CCACGAT--------CTCACC--TGCCTC-CGGTTCCGTTTCCTCCTAGCCAGGTCTGTTCTAAGCTTTCCA--------------------------GAAGTGGAGAAATTAACTGAAAGAGAACA------CTT--TCCTCCCTGTGTTAAGGTTAATCACATAATGGATCCAAATACT-GGGTCAGTCTTTACTGTGGTCTCAT------------TTCT-----CTAATTTT-----AAAATGCCTTTTCTGTTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 4583 199 - 218577 -tccaggca----ccacgat--------ctcacc--tgcctc-ggattcagtttcctcctagccaggtctgttctaagctttcca--------------------------gaagttgagaaattaactgaaagataaca------ctt--tcctccctgtgttaaggttaatcacataatgtatccaaatact-gggtcagtctttactgtggtctcat------------ttct-----ctaatttg-----aaaatgccttttctgttt i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 33441 199 + 74206 -tccaggca----ccacgat--------ctcacc--tgcctc-ggattccgtttcctcctagccaggtctgttctaagcttccca--------------------------gaagttgagaaattaactgaaagataaca------ctt--tcctccctgtgttaaggttaatcacataatgtatccaaatact-gggtcagtctttactgtggtctcat------------ttct-----ctaatttg-----aaaatgccttttctgttt i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204140591 206 + 204313951 -CTGAGGTA----CCACTAtct-----cctcacc--tgcccc-ggattcaatttcctcctaaccaggtctgttctaagctttcca--------------------------ggagttgagaaattaactgaaagatatca------ctt--tcctccctgtgttaacgttaatcacataatgtatccaaatact-gggtgagtctttcc-ttggtctaat------------ttctctgagctaatttg-----aaaatgccttttctgttt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16283193 207 + 16417988 -TCGAGGTA----CCactatct-----cctcacc--tgcctc-cgatccaatttcctcctaaccaggtctgttctaagctttcca--------------------------ggagctgagaaattaactgaaagatatca------ctt--tcctccctgtgttaatgttaatcacataatgtatccaaatact-gggtgagtctttcctttggtctaat------------ttctctgagctaatttg-----aaaatgccttttctgttt i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 68994 207 - 306014 -tccaggta----ccagtatct-----cctcacc--tgcctc-agatccaatttcctcctaaccaggtctgttctaagctttcca--------------------------ggagttgagaaattaactgaaagatatca------gtt--tcctccctgtgttaacgttaatcacataatgtatccaaatact-gggtgagtctttcctttggtctaat------------ttctctgagctaatttg-----aaaatgccttttctgttt i cebCap1.NW_016108150v1 C 0 I 340 s aotNan1.NW_018494784v1 114451 207 - 211231 -tcgaggta----ccacgatct-----cctcacc--tgcctc-ggattcagtttcctcctaaccaggtctgttctaagctttcca--------------------------ggagttgagaaattaactgaaagatatca------ctt--tcctccctgtgttaacgttaatcacataatgtatccaaatact-gggtgagtctttcctttggtctaat------------ttctctgagctaatttg-----ataatgccttttctgctt i aotNan1.NW_018494784v1 C 0 I 346 s otoGar3.GL873745 2104068 198 - 2165740 -ttgaggtg----ccactatct-----tcttgcttatatctt-ggattcaatttcctccaaactagttctgttccacactttctg--------------------------gGAGTCAAGAAATTAACTGAAAGATAACA------CTCTGTGCTCCCTACATTAACATCAATCACATCATATATCCAAATACT-GGGCCAGTCTTTCCTTTGGTCTAAT------------TTCCCTGAGCTAGTTTG-----AAAAT------------- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74318740 211 + 120421639 -Tccaggtg----ccaccatctatctccttgccc--tatctc-aggtttagtttcctcttaaccaggtctgttctaagctttcc-----------------------------agtAGAGAAATAAAT---GAGATAACC------CTG--TCCTCCT----ATGATGTTAATCATATCATGTGTCTGCATATT-GGGCCACTCTTTCCTTTAACCTAATTCTCTGAGCTACTTCTTTGAGCTACTATATACACAAAAT--------TGTTT i mm10.chr13 N 0 C 0 s canFam3.chr34 11931441 203 + 42124431 -ttaatgtacttgccactatcc-----cctcgcc--tatcttgggattcagttccctcttaaccaggtctgttctaagctttcca---agtagatggtgctcctggatgggagaggagagaaataaactgaaagacaaca---ctgctc--tcttcctcccattaacgttag-cacataatgtatcta-atgtt-ggg-------------------------------------------ccagttgg-----aaaatgccttttatta-- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 332964 235 - 913073 gtgggtgct----cgcccatct-----cctcacc--tgtcgcacgattcaactccctcctagccagggttgttctaaactttccattttgaagatcatgctcctgtat---atagtcaagaaataaactaaacgttgacagttctgctt--tctttcctacattaacattaaatacacaatgtatccaaatatt-gggtcagtttttcttttcgtctcat------------ttctctgagctaatttg-----aaaat---tctgttattt i dasNov3.JH577625 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=34219.000000 s hg38.chr3_KI270934v1_alt 100184 5 + 163458 tcctt s gorGor5.CYUI01000576v1 46314 5 - 106623 tcctt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179819460 5 - 180051392 TCCTT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 45378 5 + 100774 TCCTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 4782 5 - 218577 tcctt i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 33640 5 + 74206 tcctt i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204140797 5 + 204313951 ccctt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16283400 5 + 16417988 tcctt i saiBol1.JH378155 C 0 I 363 s cebCap1.NW_016108150v1 69541 5 - 306014 TCCTT i cebCap1.NW_016108150v1 I 340 C 0 s aotNan1.NW_018494784v1 115004 5 - 211231 TCCTT i aotNan1.NW_018494784v1 I 346 C 0 s mm10.chr13 74318951 5 + 120421639 TCCTT i mm10.chr13 C 0 I 1 s canFam3.chr34 11931644 5 + 42124431 ccctt i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 333199 5 - 913073 tcctt i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 2104266 0 - 2165740 C e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=77968.000000 s hg38.chr3_KI270934v1_alt 100189 12 + 163458 agaatttttcta s gorGor5.CYUI01000576v1 46319 12 - 106623 cgaatttttcta i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179819465 12 - 180051392 AGAATTTTTCTA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 45383 12 + 100774 AGAATTTTGCTA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 4787 12 - 218577 agaatttttctA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 33645 12 + 74206 agaatttttctA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204140802 12 + 204313951 agaatttttttA i calJac3.chr2 C 0 I 919 s saiBol1.JH378155 16283768 12 + 16417988 AGAATTTTTCTG i saiBol1.JH378155 I 363 C 0 s cebCap1.NW_016108150v1 69546 12 - 306014 AGAATTTTTCTA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 115009 12 - 211231 AGAATTTTTCTA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2104266 9 - 2165740 ---ATTTTTCTA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74318957 12 + 120421639 AGAACTTTTCTA i mm10.chr13 I 1 C 0 s canFam3.chr34 11931649 12 + 42124431 agaactttttaa i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 333204 12 - 913073 agaatttttgta i dasNov3.JH577625 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=94117.000000 s hg38.chr3_KI270934v1_alt 100201 46 + 163458 aatgtt-------tctgggcgcttgtgttcctgaGGCTTTCCACAGTGCACCC s gorGor5.CYUI01000576v1 46331 46 - 106623 aatgtt-------tctgggcgcttgtgttcctgaGGCTTTCCACAGTGCACCC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179819477 35 - 180051392 AGCGTT-------TCTGGGCGCGTGTG-----------TTCCACAGTGCACCC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 45395 35 + 100774 AGCGTT-------TCTGGGCGCGTGTG-----------TTCCACAGTGCACCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 4799 35 - 218577 AGCGTT-------TCTGGGCGCGTGTG-----------TTCCACAGTGCACCC i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 33657 35 + 74206 AGCGTT-------TCTGGGCACGTGTG-----------TTCCACAGTGCACCC i manLeu1.NW_012101728v1 C 0 C 0 s saiBol1.JH378155 16283780 46 + 16417988 AATGTT-------TCTGGGCACTTGTGTTCCTGGGGCTTTCCACAGAGCACCC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 69558 45 - 306014 AATGTT-------TCTGGGCACTTGTG-TCCTGGGGCTTTCCACAGAGCACCC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 115021 45 - 211231 AATGTT-------TCTGGGCGCTCGTG-TTCCTGGGCTTTCCACAGAGCACCC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2104275 52 - 2165740 AGCATTGGCTC-CTTCTGGTGCTAGTGTTCTGAATGCTTTCTGTAGTGTacct i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74318969 41 + 120421639 AACATTGGCTCTTTCTGGGAGCTGAGG------------TGCATGAAATGGGT i mm10.chr13 C 0 I 4 s canFam3.chr34 11931661 50 + 42124431 -acattggctatttctgggtgctagcattcctaaca--cttcatagtctaccc i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 333216 46 - 913073 aactttgattcattctgggtgc---tgttcctaa----ctctTCAGTCCATCC i dasNov3.JH577625 C 0 C 0 e calJac3.chr2 204140814 919 + 204313951 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=333664.000000 s hg38.chr3_KI270934v1_alt 100247 95 + 163458 tcttgttc-atc-tgatgtctttggca-cat-ataggccctcgacaggtagttgttcaatgaa--------------cagatGACCATCCTGTCCTTTGTGTGAACAAGCATA s gorGor5.CYUI01000576v1 46377 95 - 106623 tcttgttc-atc-tgatgtctttggca-cat-ataggccctcgacaagtagttgttcaatgaa--------------cagatGACCATCCTGTCCTTTGTGTGAACAAGCATA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179819512 95 - 180051392 TCTTGTGC-ATC-TGATgtctttggca-cat-ataggccctcgacaagtatttgttgaatgag--------------cggatGACCATCCTGTCCTTCATGTGAACAAGCATA i rheMac8.chr6 C 0 I 1 s macNem1.NW_012013899v1 45430 95 + 100774 TCTTGTGC-ATC-TGATgtctttggca-cat-ataggccctcgacaagtatttgttgaatgag--------------cggatGACCATCCTGTCCTTCATGTGAACAAGCATA i macNem1.NW_012013899v1 C 0 I 1 s cerAty1.NW_012004452v1 4834 95 - 218577 TCTTGTGC-ATC-TGATGTCTTtggca-cat-ataggccgtcgacaagtatttgttgaatgag--------------cggatGACCATCCTGTCCTTTATGTGAACAAGCATA i cerAty1.NW_012004452v1 C 0 I 1 s manLeu1.NW_012101728v1 33692 95 + 74206 TCTTGTGC-ATC-TGATgtctttggca-cat-ataggccgtcgacaagtatttgttgaatgag--------------cggatGACCATCCTGTCCTTTATGTGAACAAGCATA i manLeu1.NW_012101728v1 C 0 I 1 s calJac3.chr2 204141733 94 + 204313951 CTTGTTGCAATC-TGAAGTCTTTAGCACCAT-AAGAGCCTCCGACAAAGTGTTG--TGATGAA--------------CAGATGACCAT-CTGTCCTTTGTGTAAACGAGCATA i calJac3.chr2 I 919 I 1 s saiBol1.JH378155 16283826 94 + 16417988 TCTAGTGC-ATC-TGATGTCTTtagca-cat-agaggccctcgacaagtgtttgctcaatgaa--------------cagatGATCAT-CTGTCCTTTGTGTGAACGAGCATA i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 69603 94 - 306014 TCTTGTGC-ATC-TGATGTCTTtagca-cat-agaggccctcgacgagtgtttgttgaatgaa--------------cagatGACCAT-CTGTCCTTTGTGTGAACGAGCATG i cebCap1.NW_016108150v1 C 0 I 1 s aotNan1.NW_018494784v1 115066 94 - 211231 TCTTGTGC-ATC-TGATGTCTTCggca-cat-agaggccctcgacgagtgtttgttgaatgaa--------------CAGACGACCAT-CTGTCCTTTGTGTGAACGAGCACA i aotNan1.NW_018494784v1 C 0 I 62 s otoGar3.GL873745 2104327 81 - 2165740 ttttgttc-ct----atgtccttggca-cataacaggccctcaacaaatacttattaaaAGGC--------------TGTGTGACCATCCTGTCCTCTGTC------------ i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74319014 51 + 120421639 -------C-ATTGTCATATCTTTTGCA-TAA-AG----------------------------------------------------ATCTTTTTGTATGTGTACAGACGCATG i mm10.chr13 I 4 C 0 s canFam3.chr34 11931711 107 + 42124431 tcttgttc-atc-gtatgtcttTGGCA-TAT-AGTGAACTCT--CAAATGTTAAACAAATGGGATGACCAAGTAAGTTATATGTCCATTCTTTTGTGTGTGTGAATGTGTGCA i canFam3.chr34 C 0 I 5 s dasNov3.JH577625 333262 102 - 913073 TTAAGTTT-ATC-TTATGTGTTTTGCA-CAG-ATAGGTCCCC----AATATTTGTTAAATGGA-TGACTAAATCAGTTATGTGCCTATTCTGCCCTT--TCtaaatgtatatg i dasNov3.JH577625 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=95194.000000 s hg38.chr3_KI270934v1_alt 100342 62 + 163458 ----GCAAGTGCACAT----------TGTATCTGTTTGTGTATCCAAC---AGCG----TCCCTCCAAAGCCACTTT-GTTCAC s gorGor5.CYUI01000576v1 46472 62 - 106623 ----GCAAGTGCACAT----------TGTATCTGTGCATGTGTCCAAC---AGCA----TCCCTCCAAAGCCACTTT-GTTCAC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179819608 63 - 180051392 ----GCAAGTGTACAT----------TGTGTCTGTACATGTATCCAGC---AGCA----TCTCTCCAAAGCCACTTTGGTTCAC i rheMac8.chr6 I 1 C 0 s macNem1.NW_012013899v1 45526 63 + 100774 ----GCAAGTGTACAT----------TGTGTCTGTACATGTATCCAGC---AGCA----TCTCTCCAAAGCCACTTTGGTTCAC i macNem1.NW_012013899v1 I 1 C 0 s cerAty1.NW_012004452v1 4930 63 - 218577 ----GCAAGTGTACAT----------TGTGTGTGTACATGTATCCAGC---AGCA----TCTCTCCAAAGCCACTTTGGTTCAC i cerAty1.NW_012004452v1 I 1 C 0 s manLeu1.NW_012101728v1 33788 63 + 74206 ----GCAAGTGTACAT----------TGTGTGTGTACATGTATCCAGC---AGCA----TCTCTCCAAAGCCACTTTGGTTCAC i manLeu1.NW_012101728v1 I 1 C 0 s calJac3.chr2 204141828 60 + 204313951 ----ACAAGTCCACAT------------ACATGGCACATGCATCCAAC---AGC-----CCCCTCCGAAGCCACCTGGGTTCAG i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 16283921 55 + 16417988 ----ACATTACCTC------------------GGCACATGCATCCAAC---AGCA----ACCCTCCGAAGCCACCTGGGTTCCG i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 69698 63 - 306014 ----CCAAGTCCACAT----------TACCTCAGCACATGCATCCAAC---AGCA----ACCCTCCGAAGCCACCTGGGTTCAG i cebCap1.NW_016108150v1 I 1 C 0 s otoGar3.GL873745 2104408 57 - 2165740 -----------CACAT-----------GTATTTGTACACACACTTAACTT-GGCA----TCCATCTGAAGCCACTCAAATTCAT i otoGar3.GL873745 C 0 I 1 s mm10.chr13 74319065 53 + 120421639 --------------------------CGTGTTCTTATACATATCTAATTTAAGTG----TACCTCT-AAGCCACATTGGTTCCT i mm10.chr13 C 0 C 0 s canFam3.chr34 11931823 69 + 42124431 ----GCACGCACACAC----------ACACACTTTGTATGTATCCACCCT-AACAGCTTTCCCTCTGAAGGCACATTGAGTTGT i canFam3.chr34 I 5 I 10 s dasNov3.JH577625 333364 43 - 913073 acatgtaaacatacatatttatatataatttatgtatataaat----------------------------------------- i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 115160 62 - 211231 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=910050.000000 s hg38.chr3_KI270934v1_alt 100404 232 + 163458 TTATTTTC---TCAGGA---TCACGGACGG-C-TGCATCTTG-ACATAAGCACAC--AGAATCTT---TCCTTTTCCAGTCACTTTTCCTTTTTCCAGATTCCGGCCATAGAATTCCA-GGCACAG-AGCCAACCATGCCTGGCAC-C---CCCTCCTGTC-------TTGGGAC---AA---GGATACTTTCTCCTGTGGCTCCCATCTTGCTTCCAACATTCTTCTGCCAGAATTCAGTTTGGCGGACAATGACCTACTACTT s gorGor5.CYUI01000576v1 46534 231 - 106623 TTATTTTC---TCAGGA---CCACAGACGG-C-TGCATCGTG-ACATCTGCACAC--AGAATCTT---TCCTTTTCCAGTCACTTTTCCTTTTTCCAGATTCCGGCCATAGGATTCCA-GGCACAG-AGCCAACCATGCCTGGCA--C---CCCTCCTGTC-------TTGGGAC---AA---GGATACCTTCTCCTGTGGCTCCCATCTTCCTTCCAACATTCTTCTGCCAGAATTCAGTTTGGAGGACAATGACCTACTCCTT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179819671 232 - 180051392 TTATTTTC---TCAGGA---TTACTGACGG-C-TGCATCATG-ACATTTGCACAC--AGAATCTT---TCCTTTTCCAGTCACTTTTCCTTTTTCCAGATTCCGGCCATAGAATTCCA-GGGACAG-AGCCAACCGTGCCTGGCAC-C---CCCTCCTGTC-------TTGGGAC---AA---GGATACTTTCTCCTGTGGCTCCCGTCTTCCTTGCAACATTCTTCTGCCAGAATTCAGTATGGAAGACAATGACCTGCCACTT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 45589 232 + 100774 TTATTTTC---TCAGGA---TTACTGACGG-C-TGCATCATG-ACATTTGCACAC--AGAATCTT---TCCTTTTCCAGTCACTTTTCCTTTTTCCAGATTCCGGCCATAGAATTCCA-GGGACAG-AGCCAACCGTGCCTGGCAC-C---CCCTCCTGTC-------TTGGGAC---AA---GGATACTTTCTCCTGTGGCTCCCGTCTTCCTTGCAACATTCTTCTGCCAGAATTCAGTATGGAAGACAATGACCTGCCACTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 4993 232 - 218577 TTATTTTC---TCAGGA---TTACTGACGG-C-TGCATCATG-ACATTTGCAAAC--AGAATCTT---TCCTTTTCCAGTCACTTTTCCTTTTTCCAGATTCCGGCCATAGAATTCCA-GGGACAG-AGCCAACCATGCCTGGCAC-C---CCCTCCTGTC-------TTGGGAC---AA---GGATACTTTCTCCTGTGGCTCCCGTCTTCCTTGCAACATTCTTCTGCCAGAATTCAGTATGGAAGACAATGACCTGCCACTT i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 33851 232 + 74206 TTATTTTC---TCAGGA---TTACTGACGG-C-TGCATCATG-ACATTTGCAAAC--AGAATCTT---TCCTTTTCCAGTCACTTTTCCTTTTTCCAGATTCCGGCCATAGAATTCCA-GGGACAG-AGCCAACCATGCCTGGCAC-C---CCCTCCTGTC-------TTGGGAC---AA---GGATACTTTCTCCTGTGGCTCCCGTCTTCCTTGCAACATTCTTCTGCCAGAATTCAGTATGGAAGACAATGACCTGCCACTT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204141888 227 + 204313951 TTATTTTT---TCAGGA---TCACTGACCG-G-TGCATCGTG-ACATTTGCACAC--AGAATCTT---TCCTTTTTCAGTCACTTTCCCTTTTTCCAGATTCCAGCCATGGAATTCCA-GGGACAG-AGCCAACCGTGCCTGGCAC-C---CCCTTCTGTC-------CTGGGAC-----------TACTTTCTCCTGTGGCTCCCGTGTTCCTTCCAACATTGTTCTGCCAGAATTCAATATGGAAGAGAATGACCTACCCTTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16283976 227 + 16417988 TTATTTTC---TCAGGA---TCACTGACTG-C-TGCATTGTG-ACATTTGCACAC--AGAATCTT---TCCTTTTTCAGTCACTTTCCCTTTTTCCAGATTCCAGCTGTGGAATTCCA-GGGATAG-AGCCAACCGTGCCTGGCAC-A---CCCTCCTGTC-------CTGGGAC-----------TACTTTCTCCTGTGGCTCCCGTGTTCCTTCCAACATTTTTCTGCCAGAATTCAGTATGGAAGAGAATGACCTACCATTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 69761 230 - 306014 TTATTTTC---TCAGGA---TCACTGACCG-C-TGCATCGTG-ACATTTGCACAC--AGAATCTT---TCCTTTTTCAATCACTTTCCCTTTTTCCAGGTTCCAGCCTTGGAATTCCA-GGGACAG-AGCCAACCGTGCCTGGCAC-CCTGCCCCCCCATC-------TTAGGAC-----------TACTTTCTCCTGTGGCTCCCGTGCTCCTTCCAACATTTTTCTGCCAGGATTCAGTATGGAAGAGAATGACCTACCACTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 115222 226 - 211231 TTATTTTC---TCAGGG---TCACTGACCG-C-TGCATTGTG-ACATTTGCTCAC--AGAATCTT---TCCTTTTTCAGTCCCTTTTGCTTTTTCCAGATTCCAGCCATGGAATTCCA-GGGACAG-AGCCAACCGTGCCTGGCAC-----CCCTCCTGTC-------TTGGGAC-----------TACTTTCTCCTGTGGCTCCCGTGTTCCTTCCAACATTTTTCTGCCAGAATTCGGTACAGACGAGAATGACCTACCACTT i aotNan1.NW_018494784v1 I 62 I 15 s otoGar3.GL873745 2104466 203 - 2165740 TTATTCTC---ACAGAG---TCCCTGATGG-C-TGTGTCATA-ACATCTGCATGC--TGAG-CTT---TTGTTTTATACTCAATTTCTATTTTT-TAGCCTCCTGCTAT--AATTCCA-GTGATAGCAGACTGTCCTGCACAGT-C-C---CCTTCCTGTC-------TAAGGATGACAA---GGATACTTTCTCCTGTGGTTCCTGTTT---TTCCAATATGC-TCTGTCAGAATT--------------ATGA---------- i otoGar3.GL873745 I 1 C 0 s mm10.chr13 74319118 174 + 120421639 TTGCTT----------------ACTGGTGGAA-TGCACCCTGAACATTTGCACAT--GGAA--GA---CAAATTTTCAGTTA------ACTTTTCCTGAT---------------------------AGCCAAATATGCTCAGCAC-A---CCCTTCTTTCTCTAGTGTTAAAAC----------------TGTCACTTGGCTCCAAT---------AAAATTCT--GGTTTGAATTTAATACTAAAGAGA---ACCTATCACTC i mm10.chr13 C 0 C 0 s canFam3.chr34 11931902 189 + 42124431 TTATTTTCTCATCAAGA---CCACCAATGA-CTTGTACTGTG-ACATTTACACGC-TAGAGACCT---TCTCT-----GTCACTT--CCCTTTTACAGACTCTGG-TGCAGAATTCTAGGGGATGG-AGCCAGCTGTGCCCAG-GC-C---TCCGCCTCCT-------TTCCAAC-----------------------------------------CAATAT-----TGTCAGAATTCAGTATGAAAGAGAATGACTGACCACTT i canFam3.chr34 I 10 C 0 s dasNov3.JH577625 333407 211 - 913073 ttatTTTC---TCAGTAGACTCAATGACCA-T-TGCATTGTG-AGATCTGCACTCCTGGGACCTTGCCTCCTTTTTCAGTCACTTTCCC---TTAGAACCTCTGGCTGTAGAATTCTAGGGAATAG-AGCAGATTATGCCCAGTCCTC---CCCTCACATC-------ATCAGAT---GACTCTGATACTTTTTCTCATGGTTCCTGT----------ACTttttttta---------------------aataactttttattt i dasNov3.JH577625 C 0 I 2 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=-10679.000000 s hg38.chr3_KI270934v1_alt 100636 17 + 163458 TTAAT---TTT-TTTCCCCTT- s gorGor5.CYUI01000576v1 46765 16 - 106623 TTAA----TTT-TTTCCCCTT- i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179819903 15 - 180051392 TTAA-----TT-TTTTCCCGT- i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 45821 15 + 100774 TTAA-----TT-TTTTCCCGT- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 5225 15 - 218577 TTAA-----TT-TTTTCCCGT- i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 34083 15 + 74206 TTAA-----TT-TTTTCCCGT- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204142115 12 + 204313951 ---------TTCTCCCCCTCT- i calJac3.chr2 C 0 I 2 s saiBol1.JH378155 16284203 9 + 16417988 ------------TCTCCCCCT- i saiBol1.JH378155 C 0 I 2 s cebCap1.NW_016108150v1 69991 11 - 306014 ---------TG-TTCCCCCCT- i cebCap1.NW_016108150v1 C 0 I 2 s mm10.chr13 74319292 7 + 120421639 --------------TTTATGT- i mm10.chr13 C 0 C 0 s canFam3.chr34 11932091 7 + 42124431 ---------TT-TATTT----- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 333620 17 - 913073 ----ttattta-tttccccctc i dasNov3.JH577625 I 2 C 0 e aotNan1.NW_018494784v1 115448 15 - 211231 I e otoGar3.GL873745 2104669 0 - 2165740 C e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=50469.000000 s hg38.chr3_KI270934v1_alt 100653 11 + 163458 TTTGCTCTTCT s gorGor5.CYUI01000576v1 46781 11 - 106623 TTTGCTCTTCT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179819918 11 - 180051392 TTTGCTCTTCT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 45836 11 + 100774 TTTGCTCTTCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 5240 11 - 218577 TTTGCTCTTCT i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 34098 11 + 74206 TTTGCTCTTCT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204142129 11 + 204313951 TTTACTCTTCT i calJac3.chr2 I 2 C 0 s saiBol1.JH378155 16284214 11 + 16417988 TTTGCTCTTCT i saiBol1.JH378155 I 2 C 0 s cebCap1.NW_016108150v1 70004 11 - 306014 TTTGCTCTTCT i cebCap1.NW_016108150v1 I 2 C 0 s aotNan1.NW_018494784v1 115463 11 - 211231 TTTGCTTTTCT i aotNan1.NW_018494784v1 I 15 C 0 s otoGar3.GL873745 2104669 8 - 2165740 ---GTTCTTTT i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 333637 11 - 913073 ctccctcgttt i dasNov3.JH577625 C 0 I 753 e mm10.chr13 74319299 0 + 120421639 C e canFam3.chr34 11932098 0 + 42124431 C e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=177554.000000 s hg38.chr3_KI270934v1_alt 100664 43 + 163458 ACCAAATACCGCTTTTCACCCAGGCTTTTCACTGCGTAGTGGA s gorGor5.CYUI01000576v1 46792 43 - 106623 ACCAAATGCTGCTTTTCACCCAGGCTTTTCACTGTGTAGTGGA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179819929 43 - 180051392 ACCAAATACCGCTTTTAACACAGGCTTTTCACTGAGTAGTGGA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 45847 43 + 100774 ACCAAATACCGCTTTTAACACAGGCTTTTCACTGAGTAGTGGA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 5251 43 - 218577 ACCAAATACCGCTTTTAACACAGGCTTTTCACTGAGTAGTGGA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 34109 43 + 74206 ACCAAATACCGCTTTTAACACAGGCTTTTCACTGAGTAGTGGA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204142140 43 + 204313951 ACCAAATACCGCTTTTCACACAGGCGTTTCACTGAGTAGTGGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16284225 43 + 16417988 ACCAAATACCGCTCTTCACACGGGCGTTTCACTGAGTAGTGGA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 70015 43 - 306014 ACCAAGTACTGCTTTTCACACGGGCGTTTCACTGAGTAGTGGA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 115474 43 - 211231 ACCAAATACCGCTTTTCACACAGGCGTTTCACTGAGTAGCGGA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2104677 29 - 2165740 -----------CATTTAACTAGGGCTTCTCACTGAGTA---GA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74319299 27 + 120421639 ----------------AACTCAAGCTTCTTAGTGAGTATTGAT i mm10.chr13 C 0 C 0 s canFam3.chr34 11932098 27 + 42124431 ----------------AACTCAGGTTTTATATTAGGTAGTGGC i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 333648 753 - 913073 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=163603.000000 s hg38.chr3_KI270934v1_alt 100707 53 + 163458 CAATCTATC-AAACAGGTGCTGTCCAGCGTGA-GGGGCAGTTGCAAAGGTCTGCA s gorGor5.CYUI01000576v1 46835 54 - 106623 CAATCTATCAAAACAGGTGCTGTTCAGTGTGA-GGGGCATTTGCAAAGGTCTGCA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179819972 54 - 180051392 CAATCTATC-AGATAGGTGCTGTTCGGTGTGAGGGGGCATTTGCAAAGGTCTGCG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 45890 54 + 100774 CAATCTATC-AGATAGGTGCTGTTCGGTGTGAGGGGGCATTTGCAAAGGTCTGCG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 5294 54 - 218577 CAATCTATC-AAATAGGTGCTGTTCGGTGTGAGGGGGCATTTGCAAAGGTCTGCG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 34152 53 + 74206 CAATCTATC-AAATAGGTGCTGTTCGGTGTGA-GGGGCATTTGCAAAGGTCTGCG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204142183 49 + 204313951 CACTC-----TGATAGGTGCTGTTCAGTGTGAGAGAGCGTGGGCAAAGGCC-ACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16284268 49 + 16417988 CACTC-----AAATAGGTGCTGTTCAGTGTGAGAGGGCGTGGGCAAAGCCC-GCA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 70058 49 - 306014 CACTC-----AAATAGGTGCTGTTCAGTGTGAGAGGGTGTGGGCAAAGGGC-ACA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 115517 49 - 211231 CACTC-----AAACAGGTGCTGTTCAGCGTGAGAGGGCGTGGGCAAAGGCC-ACA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2104706 54 - 2165740 TAATTTGTC-AAATATATGTTGTTTAATGTAAAAGGGTATCAGCAAATGTCTGTA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74319326 51 + 120421639 GAGTGTGTC-AAATGTGCGCTAGATGGTGTGAGGGAGCA---GCAAACGTCCACA i mm10.chr13 C 0 I 2341 s canFam3.chr34 11932125 44 + 42124431 CAATTTATC---ATAGGTGCTGTTTAATACACTAGTGACTGTGTATA-------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 334401 53 - 913073 CAGTTTGTC-AAATATATGGTTTTTTAT-TATGAGGATATTAGCAAATGTCTACA i dasNov3.JH577625 I 753 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=182302.000000 s hg38.chr3_KI270934v1_alt 100760 83 + 163458 Tcggtgctggctgatggaactttccggtgatggcatcattccgtagctgcactgtccagtgaggaggctacttgcca---------------------------------------------------------------------c-tgtgg s gorGor5.CYUI01000576v1 46889 83 - 106623 Tcggtgctggctgatagaactttccggtgacggcatcgttccgtagctgcactgtcccgtgaggaggctacttgcca---------------------------------------------------------------------c-tgtgg i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179820026 83 - 180051392 Tcagtgctggctgatggaactttccggtgatagcatcgttccatagctgcactgtccagtgcggaggctacttgcca---------------------------------------------------------------------c-tgtgt i rheMac8.chr6 C 0 I 432 s macNem1.NW_012013899v1 45944 83 + 100774 Tcagtgctggctgatggaactttccggtgatagcatcgttccatagctgcactgtccagtgcggaggctacttgcca---------------------------------------------------------------------c-tgtgt i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 5348 83 - 218577 Tcagtgctggctgatggaactttccggtgatagcatcgttccatagctgcactgtccagtgcggaggctacttgtca---------------------------------------------------------------------c-tgtgt i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 34205 83 + 74206 Tcagtgctggctgatggaactttccggtgatagcatcgttccatagctgcactgtccagtgcggaggctacttgcca---------------------------------------------------------------------c-tgtgt i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204142232 58 + 204313951 TCAGTGCTGGCCGATGGAACTTCCCGGCGATGCCACCGTTCCGCAGCTGCACAGCCCA----------------------------------------------------------------------------------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16284317 58 + 16417988 TCAGTGCTGGCCGATGGAACTTTCCGGCGAGGCCACCGTTCCACAGCCGCACAGTCCA----------------------------------------------------------------------------------------------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 70107 58 - 306014 TCAGTGCTGGCCAATGGAGCTTTCTGACGAGGCCACTGTTCCGCAGCTGCACAGTCCA----------------------------------------------------------------------------------------------- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 115566 57 - 211231 TCAGTGCTGGCCGGTGGAACTTTCCGGCGGTGCCAGTG-TCTGCAGCTGCACAGTCCA----------------------------------------------------------------------------------------------- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2104760 130 - 2165740 TCAGTGCTGGCTGatgca----------------------ctgtgtccactctgtgcagtatggcagctacttaccagagggagcccctaagtacctgaaatggattttaaattgtcattttaattaatttaaagcatataagtagc-tgtgt i otoGar3.GL873745 C 0 I 14 s canFam3.chr34 11932169 78 + 42124431 CTGCTGTTGGTGaacagaactttc------tgcaacaatccgactgctctgctgtccagtgtggcagccacttgcca---------------------------------------------------------------------catgtag i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 334454 81 - 913073 Tcagtgctgggtgacagaactgt--ggtgatggaattgttctttatctgcaccatctaatatgtaa-ctgcttgcct---------------------------------------------------------------------catgagg i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=13941.000000 s hg38.chr3_KI270934v1_alt 100843 8 + 163458 ctactgct---- s gorGor5.CYUI01000576v1 46972 8 - 106623 ctactgCT---- i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179820541 8 - 180051392 CTACTGCT---- i rheMac8.chr6 I 432 C 0 s macNem1.NW_012013899v1 46027 8 + 100774 ctactgCT---- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 5431 8 - 218577 ctactgct---- i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 34288 8 + 74206 ctactgCT---- i manLeu1.NW_012101728v1 C 0 I 448 s otoGar3.GL873745 2104904 8 - 2165740 ctatggca---- i otoGar3.GL873745 I 14 I 1 s canFam3.chr34 11932247 8 + 42124431 ctactgac---- i canFam3.chr34 C 0 I 4 s dasNov3.JH577625 334535 12 - 913073 ctactgaacgct i dasNov3.JH577625 C 0 I 5 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 115623 0 - 211231 C e saiBol1.JH378155 16284375 0 + 16417988 C e calJac3.chr2 204142290 0 + 204313951 C e cebCap1.NW_016108150v1 70165 0 - 306014 C e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=-667.000000 s hg38.chr3_KI270934v1_alt 100851 2 + 163458 tg s gorGor5.CYUI01000576v1 46980 2 - 106623 CG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179820549 2 - 180051392 CA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 46035 2 + 100774 CG i macNem1.NW_012013899v1 C 0 I 756 s cerAty1.NW_012004452v1 5439 2 - 218577 tg i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 34744 2 + 74206 CG i manLeu1.NW_012101728v1 I 448 C 0 s otoGar3.GL873745 2104913 1 - 2165740 t- i otoGar3.GL873745 I 1 C 0 s canFam3.chr34 11932259 2 + 42124431 tg i canFam3.chr34 I 4 I 21 s dasNov3.JH577625 334552 2 - 913073 tg i dasNov3.JH577625 I 5 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 115623 0 - 211231 C e saiBol1.JH378155 16284375 0 + 16417988 C e calJac3.chr2 204142290 0 + 204313951 C e cebCap1.NW_016108150v1 70165 0 - 306014 C e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=75828.000000 s hg38.chr3_KI270934v1_alt 100853 26 + 163458 ggatg--------------GTGCAGGTCTG-A----------ATATCTTAC s gorGor5.CYUI01000576v1 46982 26 - 106623 GGACG--------------GTGCAGGTCTG-A----------ATATCTTAC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179820551 26 - 180051392 GGATG--------------GTGCGGGTCTG-A----------ATATCTTAA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 46793 26 + 100774 GGATG--------------GTGCGGGTCTG-A----------ATATCTTAA i macNem1.NW_012013899v1 I 756 C 0 s cerAty1.NW_012004452v1 5441 26 - 218577 ggatg--------------GTGCAGGTCTG-A----------ATATCTCAC i cerAty1.NW_012004452v1 C 0 I 224 s manLeu1.NW_012101728v1 34746 26 + 74206 GGATG--------------GTGCGGGTCTG-A----------ATATCTTAA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204142290 21 + 204313951 -------------------GTGCAGGTCTG-A----------GTATCTCAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16284375 21 + 16417988 -------------------GTGCAGGTCTG-A----------GTATCTCAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 70165 21 - 306014 -------------------GTGCAGGTCTG-A----------GTATCTCAG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 115623 21 - 211231 -------------------GTGCAGGTCTG-A----------GCGTCTCAG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2104914 27 - 2165740 ggcca--------------gggcaTGTCTGAA----------ACACTTTAT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11932282 40 + 42124431 gaatgtaattttaagttttatgtaattttg-g----------tgagcttaa i canFam3.chr34 I 21 I 28 s dasNov3.JH577625 334554 36 - 913073 gacta--------------gtgcaactgtg-gaatagaatttatattttaa i dasNov3.JH577625 C 0 I 9 e mm10.chr13 74319377 2341 + 120421639 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=307341.000000 s hg38.chr3_KI270934v1_alt 100879 74 + 163458 TCACAGCT----------------CACCTT------------------------------------------------------------------------------------TTTGGTGCCTTTGATCCGTATTAGGAATTATCCACATCTTCTCTCTGGGCAATATTCTA----C s gorGor5.CYUI01000576v1 47008 78 - 106623 TTACAGCT----------------CACCTT------------------------------------------------------------------------------------TTTGGTGCCTTTGATCCGTGTTAGGAATTATCCACATCTTCTCTCTGGGCAATATTCTATTTTC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179820577 78 - 180051392 ACACAGCT----------------CACCTT------------------------------------------------------------------------------------TTTGGTGCCTTTGATCCGTGTTAGCAATTACCCACATCTTCTCTCTGGGCAATATTCTACTTTC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 46819 78 + 100774 ACACAGCT----------------CACCTT------------------------------------------------------------------------------------TTTGGTGCCTTTGATCCGTGTTAGCAATTACCCACATCTTCTCTCTGGGCAATATTCTACTTTC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 5691 78 - 218577 ACACAGCT----------------CACCTT------------------------------------------------------------------------------------TTTGGTGCCTTTGATCCGTGTTAGCAATTACCCACATCTTCTCTCTGGGCAATATTCTACTTTC i cerAty1.NW_012004452v1 I 224 C 0 s manLeu1.NW_012101728v1 34772 78 + 74206 ACACAGCT----------------CACCTT------------------------------------------------------------------------------------TTTGGTGCCTTTGATCCGTGTTAGCAATTACCCACATCTTCTCTCTGGGCAATATTCTACTTTC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204142311 74 + 204313951 ACACAGCT----------------CACCTT------------------------------------------------------------------------------------TTTCCTGCCTTTGATCCGTGTTAGGAATTATCCACGCCTTCTCTCCGGGCAACATTCTAC---- i calJac3.chr2 C 0 I 4 s saiBol1.JH378155 16284396 74 + 16417988 ACCCAGCT----------------CACCTT------------------------------------------------------------------------------------TTTCCTGCCTTTGATCCATGTTAGGAATTATCCACGCCTTCTCTCTAGGCAACATTCTAC---- i saiBol1.JH378155 C 0 I 146 s cebCap1.NW_016108150v1 70186 74 - 306014 ACACAGCT----------------CACCCT------------------------------------------------------------------------------------TTTCCTGCCTTTGATCCGTGTTAGGAATTATCCACACCTTCTCGCTGGGCAACATTCTAC---- i cebCap1.NW_016108150v1 C 0 I 4 s aotNan1.NW_018494784v1 115644 74 - 211231 ACACAGCT----------------CACCTT------------------------------------------------------------------------------------TCTCCTGCCTTCGACCCGTGTTAGGAATTATCCACGCCTTCTCTCTGGGCAACATTCTAC---- i aotNan1.NW_018494784v1 C 0 I 4 s otoGar3.GL873745 2104941 61 - 2165740 -------------------------ATCTT------------------------------------------------------------------------------------TTTGCTTCATTTGATCCATGTTAGAAATTAT----ATTTTCCCTTTAGGCTGTATTCTAC---- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11932350 90 + 42124431 ggacagTTGAAGAGTACTGTACTGTATCTTAA----------------------------------------------------------------------------------TTTTTTGCTTTTGATCCATATTAGAAATTAACCACA---TCTCTCTGGATAGTATTCTAGT--- i canFam3.chr34 I 28 C 0 s dasNov3.JH577625 334599 158 - 913073 ccacattt----------------cagcttaatttaaattaaaatagccacatgtgaccatggctgttgtactgaacaggacagGTTTTATTACAACTTTTTATTATTTGTCACTTTTTTGCTTTTGATCCACATTAGAAATTATCCATATCTTCTCTCTGGGCAGTAGTCTAC---- i dasNov3.JH577625 I 9 C 0 e mm10.chr13 74319377 2341 + 120421639 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=1221920.000000 s hg38.chr3_KI270934v1_alt 100953 326 + 163458 ----TTTTTATATTGACCCAA----TTATTT------TACTTCTTTGGTGTGTCCTTTCTCCTAACACA--TATGGGTTCACTTTGAAACCCTGAAACCCACATT-TACAAAAACATTTTCAATATGAA---------------------------------------------------------------------------------------------------------------------ACATTGT----TCCATGACTC----ATTACTGGA---------------------------------------------GTACCATCAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTGGTCTCAG--TACTCATGAAAACGGTCTGAAGGTTTGTTTTGGGTTCCTAAGT----AGTAG--ACACACGCACA---ACACTGCCTGTCAGTTATTTCTTGGAAACTAAATCAGCCCTTCTGTTG--------------------C-CATCCTATCATGCTTCAGGGG s gorGor5.CYUI01000576v1 47086 328 - 106623 ----TTTTTATATTGACCCAA----TTATTT------TACTTCTTTGGTGTGTCCTTTCTCCTAACACA--TATGGGTTCACTTTGAAACCTTGAAACCCACATT-TACAAAAACATTTTCAATATGAA---------------------------------------------------------------------------------------------------------------------ACATTGT----GCCATGACTC----TTTACTGGA---------------------------------------------CTACCATCAACGTTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTGGTCTCAG--TACTCATGAAAACGGTCTGAAGGTTTGTTTTGGGTTCCTAAGT----AGTAGACACACACGCACA---ACACTGCCTGTCAGTTATTTCTCGGAAACTAAATCAGCCCTTCTGCTG--------------------C-CATCCTATCATGCTTCAGGGG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179820655 328 - 180051392 ----ATTTTATATTGACCCAA----TTATTT------TACTTCTTTGGTGTGTCCTTTCTTCTAACACA--TATGGGTTCACTTTGAAACCTTGAAACCCACATT-TAC-AAAATATTTTTGGTATGAA---------------------------------------------------------------------------------------------------------------------ACATGGT----TCCATGACTC----ATTAGTGGA---------------------------------------------GTACCATAAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTGGTCTCAG--TACTCATGAAAACGGTCTGAAGGTTTGTTTTGGGTTCCTAAGCAGTAAGTAG--ACACACACACA---ACACTGCCTGTCAGCTATTTCTTGGAAACTAAATCAG-CCTTCTGTTG--------------------C-CATCCTATCATGCTTCAGGGG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 46897 324 + 100774 ----ATTTTATATTGACCCAA----TTATTT------TACTTCTTTGGTGTGTCCTTTCTCCTAACACA--TATGGGTTCACTTTGAAACCTTGAAACCCACATT-TAC-AAAATATTTTCGGTATGAA---------------------------------------------------------------------------------------------------------------------ACATGGC----TCCATGACTC----ATTAGTGGA---------------------------------------------GTACCATAAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTGGTCTCAG--TACTCATGAAAACGGTCTGAAGGTTTGTTTTGGGTTCCTAAGC----AGTAG--ACACACACACA---ACACTGCCTGTCAGCTATTTCTTGGAAACTAAATCAG-CCTTCTGTTG--------------------C-CATCCTATCATGCTTCAGGGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 5769 324 - 218577 ----ATTTTATATTGACCCAA----TTATTT------TACCTCTTTGGTGTGTCCTTTCTCCTAACACA--TATGGATTCACTTTGAAACCTTGAAACCCACATT-TAC-AAAACATTTTCGGTATGAA---------------------------------------------------------------------------------------------------------------------ACATGGT----TCCATGACTC----ATTAGTGGA---------------------------------------------GTACCATAAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTCGTCTCAG--TACTCATGAAAACGGTCTGAAGGTTTGTTTTGGGTTCCTAAGC----AGTAG--ACACACACACA---ACACTGCCTGTCAGCTATTTCTCGGAAACTAAATCAG-CCTTCTGTTG--------------------C-CATCCTATCATGCTTCAGGGG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 34850 324 + 74206 ----ATTTTATATTGACCCAA----TTATTT------TACCTCTTTGGTGTGTCCTTTCTCCTAACACA--TATGGGTTCACTTTGAAACCTTGAAACCCACATT-TAC-AAAACATTTTCGGTATGAA---------------------------------------------------------------------------------------------------------------------ACATGGT----TCCATGACTC----ATTAGTGGA---------------------------------------------GTACCATAAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTCGTCTCAG--TACTCATGAAAACGGTCTGAAGGTTTGTTTTGGGTTCCTAAGC----AGTAG--ACACACACACA---ACACTGCCTGTCAGCTATTTCTCAGAAACTAAATCAG-CCTTCTGTTG--------------------C-CATCCTATCATGCTTCAGAGG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204142389 317 + 204313951 ----TTTTTATATTGACCCAA----TGATTT------TACTTCTTTGGTTTGTCCTTTCTCTGAACAAG--CATGGGTTCATTTTGAAACCTTGAAACCCACATT-TAC-AAAACATTTTCAATATGAA---------------------------------------------------------------------------------------------------------------------ACATCGT----TCTATGACTCAGTAATTAGTGGA---------------------------------------------GCACTATAAAAATTTAC-TTTTCAGACCACCCACTGCCCAGTGGCTTCCTTGGTCTCAG--TACTCATGAGAACTGTCTGAGGGTTTGTTTCTGATTCCT---T----AGTAG--ACATACACACAAGGAAGCTGCCCAGCAGTTATTC-----------GATTGGCCCTTCCGTTG--------------------C-CACCCTATCATACTTCAGGGG i calJac3.chr2 I 4 C 0 s saiBol1.JH378155 16284616 330 + 16417988 ----TTTTTATATTGACCCAA----TTATTT------TACTTCTTTGGTTTGTCCTTTCTCCTAGCAAG--TATGAGTTCATTTTGAAACCTTGAAACCCACATT-TAC-AAAACATTTTCAATATGAA---------------------------------------------------------------------------------------------------------------------ACATCAT----TCCATGACTCAGTAATTAGTGGA---------------------------------------------GTACTATAAAAATTTACATTTTCAGACCACCCACTGCCCAATGGTTTTCTTGGTCTCAG--TACTCATGAAAACTGTCTGAAGATTTGTTTCTGGTTCCT---T----AGTAG--ACATACACACAAGGAAGCTGCCCAGCAGTTATTTCTTGGAAATGAAATTGGCCCTTCCGTTG--------------------CGCATCCTATCATGCTTCAGGGG i saiBol1.JH378155 I 146 I 305 s cebCap1.NW_016108150v1 70264 329 - 306014 ----TTTCTATATTGACCCAA----TTATTT------TACTTCTTTGGTTTGTCCTTTCTCCTAACAAG--TATGGGTTCATTTTGAAACCCTGAAACCCACATT-TAC-AAAACATTTTCAATATGAA---------------------------------------------------------------------------------------------------------------------GCATCGT----TCCATGACTCAGTAATTAGTGGA---------------------------------------------GTACTATAAAAATTTACATTTTCAGACCACCCACTGCCCAATGGTTTTCTTAGTCTCAG--TACTCATGAAAACTGTCTGAAGGTTTGTTTCTGGTTCCT---T----AGTAG--ACATACACACAAGGAAGCTGCCCAGCAGTTATTTCTTGGAAACTAAATTGGTCCTTCTGTTG--------------------C-CATCCTATCATGCTTCAGGGG i cebCap1.NW_016108150v1 I 4 C 0 s aotNan1.NW_018494784v1 115722 328 - 211231 ----TTTTGATATTGACCCAA----TTATTT------TACTTCTTTGGTTTGTCCTGTCTCCTAACAAG--TATGGGTTCATTCTGAAACCCTGAAACCCACATT-TAC-AAAACATTTTCAATATGAA---------------------------------------------------------------------------------------------------------------------ACATCAT----TTCATGACTCAGTAATTAGTGGA---------------------------------------------GTGCTAT-AAAATTTACATTTTCAGACCACCCACTGCCCAGTGGTTTTCCTGGTCTCAG--AACTCATGAAAACTGTCTGAAGGGTTGTTTCTGGTTCCG---T----AGTAG--ACACACACACAAGGAAGCTGCCCAGCAGTTACTTCTTGGAAACTAAATTGGCGCTTCCGTTG--------------------C-CATCCTATCATGCTTCAGGGG i aotNan1.NW_018494784v1 I 4 C 0 s otoGar3.GL873745 2105002 302 - 2165740 ----TTTTCATATTGAACCAA----TTTTTT------TATTTCTT-----TGTCTATTCCCCAACCAAATGTGTGGGTTCATTTTTAAACTCTGAAACACATATC-TAC-AAAACATTTTTAACATAAA---------------------------------------------------------------------------------------------------------------------ACATTCT--GACCTGTGGCTCATTAATTAGTGGA---------------------------------------------GTACCATAAACATTTACATTTCCAGACTACCCATTCCCCAATGATCATCTTGGTCTCAA--TATTAATGGAA----TTTAAATGCTTGTCTTTGGTTCAAAACT----AGTAG--ACAAGGA-------AATCATCCCATCACTTATTTCTTTG-AACCAAATGGGCCCT-----TG--------------------C-CA------------TCAGGGG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11932440 481 + 42124431 ----TTTTTACCTTGATGCA------CATTTAAAAAAAATTTCTCTGCTCTGTAAATTCCCCTAACA----TGTGGGTTC-TCTTAGAACCTTG-AATATACATTGTAC-AAAATATTTCCAGTACAgagatgcctgggtggctcagcagttgagcttctgccttcagctcagggcatgatccagcaatcccggaatagagtcccacattggggtctctgcatggagcctgcttctcactctgcctacatctc----tgcctgtctc--tcatgaataaaacaaacaaacaaaaaaaaACCCATATTACCAGTATGAAATATTCTGTCCCATAGGAACTTGTATTTCCAG---ACCTACTCCC--GTGATTTTCTTGGTTTCAGAATGTTCATAAAAATGGTCCACAGGTTGACTTTTGGTTGAAAAGT----AGCAG--ATATAAGGAAG---CCAGGGCCT--CAGTTACTTCTTTGAAACC-AATCAGCCCTTCTGT------------------------CATCTAATTATGCTTCAGGTA i canFam3.chr34 C 0 I 2 s dasNov3.JH577625 334757 240 - 913073 TTTCTTTGTATCTTGACCCAAGTTTTTTTTT------TTCTTCTCTGGTTTGTCAATTCCCCT-GCACA--TGTGGGTTCTTTTTGAAACCACGGTACACATATT-TTA-CAAGGTTTGCCAATATGAA---------------------------------------------------------------------------------------------------------------------ATATATTCGACTCCATG-CTCATTAACTAGTGGA---------------------------------------------C------------------------------------------------------------TACTC-------------------------------------T----AGAAA---------------------------CAGTTACCTTTTGAAAACC-AATCAATCCTTGTATTGTCACTGGCCACTCCTGGGCCC-CATCCTAGCACACTTTAGGG- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=7098.000000 s hg38.chr3_KI270934v1_alt 101279 1 + 163458 T s gorGor5.CYUI01000576v1 47414 1 - 106623 T i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179820983 1 - 180051392 T i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 47221 1 + 100774 T i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 6093 1 - 218577 T i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35174 1 + 74206 T i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204142706 1 + 204313951 T i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16285251 1 + 16417988 T i saiBol1.JH378155 I 305 C 0 s cebCap1.NW_016108150v1 70593 1 - 306014 T i cebCap1.NW_016108150v1 C 0 I 309 s aotNan1.NW_018494784v1 116050 1 - 211231 T i aotNan1.NW_018494784v1 C 0 I 301 s otoGar3.GL873745 2105304 1 - 2165740 T i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11932923 1 + 42124431 T i canFam3.chr34 I 2 C 0 s dasNov3.JH577625 334997 1 - 913073 T i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=54730.000000 s hg38.chr3_KI270934v1_alt 101280 9 + 163458 GCCTGTGCT s gorGor5.CYUI01000576v1 47415 9 - 106623 GCCTGTGCT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179820984 9 - 180051392 GCCTGTGCT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 47222 9 + 100774 GCCTGTGCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 6094 9 - 218577 GCCTGTGCT i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35175 9 + 74206 GCCTGTGCT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204142707 9 + 204313951 GCCTGTGCT i calJac3.chr2 C 0 I 294 s saiBol1.JH378155 16285252 9 + 16417988 GCCTGTGCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 70903 9 - 306014 GCCTGTGCC i cebCap1.NW_016108150v1 I 309 C 0 s aotNan1.NW_018494784v1 116352 9 - 211231 GCCTGTGCC i aotNan1.NW_018494784v1 I 301 C 0 s otoGar3.GL873745 2105305 9 - 2165740 ACTTGTCCT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11932924 9 + 42124431 GCCTTTGCC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 334998 9 - 913073 ACCTGTGCT i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=290593.000000 s hg38.chr3_KI270934v1_alt 101289 62 + 163458 AGTTTTTAATTCTTTGTCCTAACACTTAAATGTTTGCTCAAACGCCCATATTAATACTTCCT s gorGor5.CYUI01000576v1 47424 62 - 106623 AGTTTTTAATTCTTTGTTCTAACACTTAAATGTTTGCTCAAACGCCCATATTAATACTTCCT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179820993 61 - 180051392 AGTTTTTAATTATTTGTCCTGACACTTAAATGTCTGCTC-AACGTCCATATTAATACTTCCT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 47231 62 + 100774 AGTTTTTAATTCTTTGTCCCGACACTTAAATGTCTGCTCAAACGTCCATATTAATACTTCCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 6103 62 - 218577 AGTTTTTAATTCTTTGTCCTAACACTTAAATGTCTGCTCAAACGTCCATATAAATACTTCCT i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35184 62 + 74206 AGTTTTTAATTCTTTGTCCTAACACTTAAACGTCTGCTCAAACGTCCATATAAATACTTCCT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204143010 61 + 204313951 AGCTTTTAATTCTTTGTCCTAACACTTAAATGTTTGCTCAAACACCCGTGTTAATACTA-CT i calJac3.chr2 I 294 C 0 s saiBol1.JH378155 16285261 61 + 16417988 AGTTTTTAATTCTTTGTCCTAACACTTAAATGTTTGCTCAAACACCTGTGTTAACACTA-TT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 70912 59 - 306014 AGTTTTTAATTCTTTGTCCTAACACTTAAATGTTTGCTCAAACACTCATGCTAATACTA--- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 116361 59 - 211231 AGGTTTTAATTCTTTGTCCCAACGCTTAAATGTTTGCTCAAACACCCGTGTTAATACTA--- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2105314 57 - 2165740 AGTTTTTAATTCATTGTCCTAAC----AAATGT-TGCTCAGACACCCACACTAATACTTCCT i otoGar3.GL873745 C 0 I 404 s canFam3.chr34 11932933 61 + 42124431 AGCTTTTCATTCATTGTCCTAACACTTAAATGA-TGTTTAGATGCCCATATTTATACTTCCA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 335007 59 - 913073 -GTTTTAAATTCATTGT-CTAACATATAAATGT-TGCTCAAATGCCCATATTAATACTTACA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=4525.000000 s hg38.chr3_KI270934v1_alt 101351 3 + 163458 CTT s gorGor5.CYUI01000576v1 47486 3 - 106623 CTT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179821054 3 - 180051392 CTT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 47293 3 + 100774 CTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 6165 3 - 218577 CTT i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35246 3 + 74206 CTT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204143071 3 + 204313951 CTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16285322 3 + 16417988 CTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 70971 3 - 306014 CTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 116420 3 - 211231 CTT i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 11932994 2 + 42124431 CT- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 335066 1 - 913073 C-- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e otoGar3.GL873745 2105371 404 - 2165740 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=528814.000000 s hg38.chr3_KI270934v1_alt 101354 154 + 163458 AGTTTACAAAAGG-------ATTTACTTTC--T--------TACT-----GGTTGGGATGAAGCTGCCTGAGGTTGCCA-------------CCTGTTATTTT------------TCCTTC--ATTTATTGGACCATGTCATCCCATTACATGTTAGCCGTGG--AGGTT-----TTCAAACTGTGTTCcctg-gacatgttagaaatgca s gorGor5.CYUI01000576v1 47489 154 - 106623 AGTTTACAAAAGG-------ATTTACTTTC--T--------TACT-----GGTTGGGATGAAGCTGCCTGAGGTTGCCA-------------CCTGTTATTTT------------TCCTTC--ATTTATTGGACCATGTCATCCCATTACATGTCTGCCATGG--AGGTT-----TTCAAACTGTGGTCcctg-gacatgttagaaatgca i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179821057 140 - 180051392 AGTTTACAAAAGG-------ATTTACTTTC--T--------TACT-----GGTTGGGATGAAGCTGTCTGAGGTTGCCA-------------CCTGTTATTAT------------TCCTTC--ATTTATTGGACCATGTC-TGCCAT-------------TGG--AGGTT-----TTCAAACTGTGGTCcctg-gacatgttagaaatgca i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 47296 140 + 100774 AGTTTACAAAAGG-------ATTTACTTTC--T--------TACT-----GGTTGGGATGAAGCTGTCTGAGGTTGCCA-------------CCTGTTATTAT------------TCCTTC--ATTTATTGGACCATGTC-TGCCAT-------------TGG--AGGTT-----TTCAAACTGTGGTCcctg-gacatgttagaaatgca i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 6168 140 - 218577 AGTTTACAAAAGG-------ATTTACTTTC--T--------TACT-----GGTTGGGATGAAGCTGTCTGAGGTTGCCA-------------CCTGTTATTAT------------TCCTTC--ATTTATTGGACCATGTC-TGCCAT-------------TGG--AGGTT-----TTCAAACTGTGGTCcctg-gacatgttagaaatgca i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35249 140 + 74206 AGTTTACAAAAGG-------ATTTACTTTC--T--------TACT-----GGTTGGGATGAAGCTGTCTGAGGTTGCCA-------------CCTGTTATTAT------------TCCTTC--ATTTATTGGACCATGTC-TGCCAT-------------TGG--AGGTT-----TTCAAACTGTGGTCcctg-gacatgttagaaatgca i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204143074 172 + 204313951 AGTTTTCAGAAGGCTTGGGGATTTACTTTC--T--------TACT-----GGCTGGGATGAAGCTTCCTGAGGTTGCCAGGGGGTCT--CCACCTGTTGTTGT------------TCCCCC--GTTTATCGGACCGTGTCATCCCATTACATGTCTGCCACAG--AGGTT-----TCCAAACTGTGGTCcctg-ggcatgttagaaatgcc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16285325 168 + 16417988 AGTTTACAGAAGGCTTGGGGATTTACTTTC--T--------TACT-----GGCTGGGATGAAGCTGCCTGAGGTTGCCA-GGAGTCT--CCACC---TGTTTT------------TCCTTC--GTTTATTGGACCGTGTTATCCTCTTACATGTCTGCCATGG--AGATT-----TTCAAACTGTGGTCcctg-ggcatgttagaaatgcc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 70974 171 - 306014 AGTTTACAGAAGGCTTGGGGATTTACTTTC--T--------TACT-----GGCTGGCATGAAGCTGCCTGAGGTTGCCA-GGGGTCT--CCACCTGTTGTTTT------------TCCTTC--GTTTATTGGACCGTGTCATCCCATTACATGTCTGCCATGG--AGGTT-----TTCAAACTGTGGTGcctg-ggcatgttcgaaatgcc i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 116423 158 - 211231 AGTTTACAGACGGC-------------TTC--T--------TACT-----GGCTGGGATGAAGCTGCCTGAGGTTGCCG-GGGGTCT--CCACCTGCTGTTTC------------TCCTTC--GTTTATTGGACCGTGTCATCCCATCACATGTCTGCCATGG--AGGTT-----TTCAAACTGCGGTCcctg-ggcacgttagaaatgcc i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2105775 175 - 2165740 AGTTTACAAAATACGTTGGCATTTATTTTC--TCATTAAAGTAGT-----GGTTGGGAAGAAGCTGCCCAAGGTTGTCA-GCACTCTC-CCACCTGTCCTTTT------------TCCAT---GTTTGTTGGACCATGTCATTTTATTTCATGTCTTCCAT-----GGTT-----TTCAAAGTG-GGCCACTA-GACATGTTAGAAGTACA i otoGar3.GL873745 I 404 C 0 s canFam3.chr34 11932996 170 + 42124431 --TCTGCAATATTCTTTGGCACGCTGTTTCATC--------TACT-----GGTTAGCATGGAG--GTCTGAAGTTGTCA-GTCATCTCTCCACCTGTTATCTTCTGAAAATCATCTCCAT---GTTTGTT-GACCACATCACCCCAA-ACA----------GG--TGGTT-----TTCAAAGGGTGGGCCCTg-aacatactacacatgca i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 335067 175 - 913073 --TTTACAAAACGTCTTCCCACATATATTC--T--------CAATAAATCAATTGGGATGAAGCT-------GTTAtta---------------ttttcttct--gaaaattagctccttcatgtttgtttaaccacgtcatgcctgttcactttcacagtaacttggtttgtagtttaatctgTCATCATTGTGAAATGGTGAAAATATA i dasNov3.JH577625 C 0 I 13689 e mm10.chr13 74319377 2341 + 120421639 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=68986.000000 s hg38.chr3_KI270934v1_alt 101508 15 + 163458 aattctcagaccgaa s gorGor5.CYUI01000576v1 47643 15 - 106623 aattctcagaccgaa i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179821197 15 - 180051392 aattctcaggccgaa i rheMac8.chr6 C 0 I 576 s macNem1.NW_012013899v1 47436 15 + 100774 aattctcaggccgaa i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 6308 15 - 218577 aattctcaggctgca i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35389 15 + 74206 aattctcaggctgaa i manLeu1.NW_012101728v1 C 0 I 45 s calJac3.chr2 204143246 15 + 204313951 aattctcaggcctaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16285493 15 + 16417988 aattctcaggcctaa i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 71145 15 - 306014 aattctcaggcctaa i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 116581 15 - 211231 aattctcaggcctaa i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2105950 15 - 2165740 GGCCCTCAGGCCCAA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11933166 15 + 42124431 gattctcaggaccaa i canFam3.chr34 C 0 I 2 e mm10.chr13 74319377 2341 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=66567.000000 s hg38.chr3_KI270934v1_alt 101523 25 + 163458 ccagga----ctgaatcggaagatctggg s gorGor5.CYUI01000576v1 47658 25 - 106623 ccagga----ctgaatcagaatatctggg i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179821788 25 - 180051392 CCAGGA----CTGAATCGGAAGGTCTGGG i rheMac8.chr6 I 576 C 0 s macNem1.NW_012013899v1 47451 25 + 100774 tcagga----ctgaatcagaagatctggg i macNem1.NW_012013899v1 C 0 I 180 s cerAty1.NW_012004452v1 6323 25 - 218577 cctgga----ctgcatcagaaggtctggg i cerAty1.NW_012004452v1 C 0 C 0 s calJac3.chr2 204143261 23 + 204313951 ccagga----ctg-at-ggaagttctggg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16285508 24 + 16417988 ccagga----ctgaat-ggaagttctggg i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 71160 24 - 306014 ccagga----ctgaat-ggaagttctggg i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 116596 24 - 211231 ccagga----ctgaat-ggaagttctggg i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2105965 20 - 2165740 CCAGGA----CCTTCT-----GAACTGGT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11933183 29 + 42124431 ccaggacctgctgaaccagaagtcctggg i canFam3.chr34 I 2 C 0 e mm10.chr13 74319377 2341 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e manLeu1.NW_012101728v1 35404 45 + 74206 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=17095.000000 s hg38.chr3_KI270934v1_alt 101548 8 + 163458 gtag-----------------------------------ggtc s gorGor5.CYUI01000576v1 47683 43 - 106623 gtagggtccCCCCAGGACTGAATCGGAAGATCTGGGTACGGTC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179821813 8 - 180051392 GTGG-----------------------------------GGTC i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012004452v1 6348 8 - 218577 gtgg-----------------------------------ggtc i cerAty1.NW_012004452v1 C 0 C 0 s calJac3.chr2 204143284 8 + 204313951 gtag-----------------------------------ggtc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16285532 8 + 16417988 gtag-----------------------------------ggtc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 71184 8 - 306014 gtag-----------------------------------ggtc i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 116620 8 - 211231 atag-----------------------------------ggtc i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2105985 8 - 2165740 GTAG-----------------------------------GGTC i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11933212 8 + 42124431 atgg-----------------------------------ggtc i canFam3.chr34 C 0 I 90 e mm10.chr13 74319377 2341 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 47476 180 + 100774 I e manLeu1.NW_012101728v1 35404 45 + 74206 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=3600.000000 s hg38.chr3_KI270934v1_alt 101556 1 + 163458 c s gorGor5.CYUI01000576v1 47726 1 - 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179821821 1 - 180051392 C i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012004452v1 6356 1 - 218577 c i cerAty1.NW_012004452v1 C 0 I 10 s calJac3.chr2 204143292 1 + 204313951 c i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16285540 1 + 16417988 c i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 71192 1 - 306014 c i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 116628 1 - 211231 c i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2105993 1 - 2165740 C i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 47476 180 + 100774 I e canFam3.chr34 11933220 90 + 42124431 I e manLeu1.NW_012101728v1 35404 45 + 74206 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=9375.000000 s hg38.chr3_KI270934v1_alt 101557 5 + 163458 CTCCA s gorGor5.CYUI01000576v1 47727 5 - 106623 CTCCA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179821822 5 - 180051392 CCCCA i rheMac8.chr6 C 0 C 0 s calJac3.chr2 204143293 5 + 204313951 CTCCA i calJac3.chr2 C 0 I 588 s saiBol1.JH378155 16285541 5 + 16417988 ctgca i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 71193 5 - 306014 ctcca i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 116629 5 - 211231 ctcca i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2105994 5 - 2165740 CTTTA i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 47476 180 + 100774 I e canFam3.chr34 11933220 90 + 42124431 I e manLeu1.NW_012101728v1 35404 45 + 74206 I e cerAty1.NW_012004452v1 6357 10 - 218577 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=2100.000000 s hg38.chr3_KI270934v1_alt 101562 1 + 163458 G s gorGor5.CYUI01000576v1 47732 1 - 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179821827 1 - 180051392 G i rheMac8.chr6 C 0 C 0 s saiBol1.JH378155 16285546 1 + 16417988 G i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 71198 1 - 306014 g i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 116634 1 - 211231 g i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2105999 1 - 2165740 G i otoGar3.GL873745 C 0 I 263 e mm10.chr13 74319377 2341 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 47476 180 + 100774 I e calJac3.chr2 204143298 588 + 204313951 I e canFam3.chr34 11933220 90 + 42124431 I e manLeu1.NW_012101728v1 35404 45 + 74206 I e cerAty1.NW_012004452v1 6357 10 - 218577 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=1500.000000 s hg38.chr3_KI270934v1_alt 101563 1 + 163458 G s gorGor5.CYUI01000576v1 47733 1 - 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179821828 1 - 180051392 G i rheMac8.chr6 C 0 C 0 s saiBol1.JH378155 16285547 1 + 16417988 G i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 71199 1 - 306014 g i cebCap1.NW_016108150v1 C 0 I 746 s aotNan1.NW_018494784v1 116635 1 - 211231 g i aotNan1.NW_018494784v1 C 0 I 740 e mm10.chr13 74319377 2341 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 47476 180 + 100774 I e calJac3.chr2 204143298 588 + 204313951 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e manLeu1.NW_012101728v1 35404 45 + 74206 I e cerAty1.NW_012004452v1 6357 10 - 218577 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=1419.000000 s hg38.chr3_KI270934v1_alt 101564 5 + 163458 ACTGA s gorGor5.CYUI01000576v1 47734 5 - 106623 ACTGA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179821829 5 - 180051392 ACTGA i rheMac8.chr6 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 47476 180 + 100774 I e saiBol1.JH378155 16285548 0 + 16417988 C e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e manLeu1.NW_012101728v1 35404 45 + 74206 I e cerAty1.NW_012004452v1 6357 10 - 218577 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=-1877.000000 s hg38.chr3_KI270934v1_alt 101569 3 + 163458 -AAA s gorGor5.CYUI01000576v1 47739 2 - 106623 -AT- i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179821834 1 - 180051392 -A-- i rheMac8.chr6 C 0 I 1 s manLeu1.NW_012101728v1 35449 2 + 74206 AA-- i manLeu1.NW_012101728v1 I 45 I 1 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 47476 180 + 100774 I e saiBol1.JH378155 16285548 0 + 16417988 C e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e cerAty1.NW_012004452v1 6357 10 - 218577 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=50170.000000 s hg38.chr3_KI270934v1_alt 101572 67 + 163458 CGGAAGGTCTGGGGTGGGGTACCC-CAGGACTGAATCGGAAGGTCTGGGGTGGGGTCCCCCCAGGACT s gorGor5.CYUI01000576v1 47741 68 - 106623 CGGAAGGTCTGGGGTGGGATCCCCGCAGGACTGAATCGGAAGATCTGGGGTGGGGTCCCTCCAGGACT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179821836 68 - 180051392 CGGAAGGTCTGGGGTGGGGTCCCCCCAGGACTGAATCGGAAGGTCTGGGGTGGGGTCCCCCCAGGACT i rheMac8.chr6 I 1 C 0 s macNem1.NW_012013899v1 47656 64 + 100774 CGGAAGGTCTGGGGTGGGG--CCCCCAGGACTGAATCGGAAGGTCTGGGGTGGGGTCCCCC--AGACT i macNem1.NW_012013899v1 I 180 C 0 s manLeu1.NW_012101728v1 35452 68 + 74206 CGGAAGGTCTGGGGTGGGGTCACCCGAGGACTGAATTGGAAGGTCTGGGGTGGGGTCGCCTGAGGACG i manLeu1.NW_012101728v1 I 1 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16285548 0 + 16417988 C e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e cerAty1.NW_012004452v1 6357 10 - 218577 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=14540.000000 s hg38.chr3_KI270934v1_alt 101639 16 + 163458 GAATCG-----------------------------------GAAGGTCTGG s gorGor5.CYUI01000576v1 47809 51 - 106623 GAACCGGAAGGTCTGGGGTAGGGTCCCCCAGGACTGAATCCGAAGGTCTGG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179821904 16 - 180051392 GAATCG-----------------------------------GAAGGTCTGG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 47720 16 + 100774 GAATCG-----------------------------------GAAGGTCTGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 6367 16 - 218577 GAATCG-----------------------------------GAAGGTCTGG i cerAty1.NW_012004452v1 I 10 C 0 s manLeu1.NW_012101728v1 35520 16 + 74206 GAATCA-----------------------------------GAAGGTCTGG i manLeu1.NW_012101728v1 C 0 T 132 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16285548 0 + 16417988 C e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=33400.000000 s hg38.chr3_KI270934v1_alt 101655 46 + 163458 ACGAGGGTCCCCCCAGGACTGAATCAGAAGATCTGGGGTAGGGTCT s gorGor5.CYUI01000576v1 47860 46 - 106623 ACTAGGGTCCCCCCAAGACTGAATCAGAAGATCTGGGGTAGGGTCT i gorGor5.CYUI01000576v1 C 0 I 140 s rheMac8.chr6 179821920 46 - 180051392 GGTGGGGTCCCCCCAGGACTGAATCGGAAGGTCTGGGGTGGGGTCC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 47736 45 + 100774 GGTGGGGT-CCCCCAGGACTGAATCGGAAGGTCTGGGGTGGGGTCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 6383 46 - 218577 GGTGGGGTCACCCGAGGACTGAATCGGAAGGTCTGGGGTGGGGTCC i cerAty1.NW_012004452v1 C 0 T 72 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16285548 0 + 16417988 C e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e manLeu1.NW_012101728v1 35536 132 + 74206 T e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=2000.000000 s hg38.chr3_KI270934v1_alt 101701 2 + 163458 CC s gorGor5.CYUI01000576v1 48046 2 - 106623 CC i gorGor5.CYUI01000576v1 I 140 C 0 s rheMac8.chr6 179821966 2 - 180051392 CC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 47781 2 + 100774 CC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 6357 2 - 218577 CC i cerAty1.NW_012004452v1 T 72 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16285548 0 + 16417988 C e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e manLeu1.NW_012101728v1 35536 132 + 74206 T e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=116843.000000 s hg38.chr3_KI270934v1_alt 101703 96 + 163458 CCAGGACTGAATCGGAAGGTCTGGGGTGGGGTCCCCCCAGGACTGAATTGGAAGGTCTGGACTAGGGCCCCCCCAGGACCGAATCGGAAGGTCTGG s gorGor5.CYUI01000576v1 48048 95 - 106623 CCAGGACTGAATCGGAAGATCTGGGGTAGGGTCCCCCCAGGACTGAATCGGAAGATCTGGGGTAGGG-TCCCCCAGGACTGAATCGAAAGATCGGG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179821968 96 - 180051392 CCAGGACTGAATCGGAAGGTCTGGGGTGGGGTCCCCCCAGGACTGAATCGGAAGGTCTGGGGTGGGGTCCCCCCAGGACTGAATCGGAAGGTCTGG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 47783 95 + 100774 CCAGGACTGAATCGGAAGGTCTGGGGT-GGGTCCCCCCAGGACTGAATCGGAAGGTCTGGGGTGgggtccccccaggactgaatcggaaggtctgg i macNem1.NW_012013899v1 C 0 I 16 s cerAty1.NW_012004452v1 6359 96 - 218577 CGAGGACTGAATCGGAAGGTCTGGGGTGGGGTCACCCGAGGACTGAATCGGAAGGTCTGGGGTGGGGTCCCCCCAGGACTGAATTGGAAGGTCTGG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35404 96 + 74206 ccaggactgaatcggaaggtctggggtggggtcACCCGAGGACTGAATCGGAAGGTCTGGGGTGGGGTCACCCGAGGACTGAATTGGAAGGTCTGG i manLeu1.NW_012101728v1 T 132 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16285548 0 + 16417988 C e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=8666.000000 s hg38.chr3_KI270934v1_alt 101799 18 + 163458 ACTAGGGTCCCCCCAGGA s gorGor5.CYUI01000576v1 48143 17 - 106623 GGTAGCGT-CCCCAAGGA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 179822064 18 - 180051392 GGTGGGGTCCCCCCAGGA i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012004452v1 6455 18 - 218577 GGTGGGGTCGCCTGAGGA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35500 18 + 74206 GGTGGGGTCGCCTGAGGA i manLeu1.NW_012101728v1 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 47878 16 + 100774 I e saiBol1.JH378155 16285548 0 + 16417988 C e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=34089.000000 s hg38.chr3_KI270934v1_alt 101817 29 + 163458 CTGAATTGGAAGGTCTGGGGTAGCGTCCC s gorGor5.CYUI01000576v1 48160 29 - 106623 CTGAATCAAAAGATCTGGGGTAGCGTCCC i gorGor5.CYUI01000576v1 C 0 N 0 s rheMac8.chr6 179822082 29 - 180051392 CTGAATCGGAAGGTCTGGGGTGGGGTCCC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 47894 29 + 100774 ctgaattggaaggtctggggtggggtccc i macNem1.NW_012013899v1 I 16 C 0 s cerAty1.NW_012004452v1 6473 29 - 218577 CGGAATCAGAAGGTCTGGGGTGGGGTCCC i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35518 29 + 74206 CGGAATCAGAAGGTCTGGGGTGGGGTCCC i manLeu1.NW_012101728v1 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16285548 0 + 16417988 C e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=5414.000000 s hg38.chr3_KI270934v1_alt 101846 5 + 163458 TCCAG s gorGor5.CYUI01002752v1 7808 5 - 41186 CCCAG i gorGor5.CYUI01002752v1 N 0 I 284 s rheMac8.chr6 179822111 5 - 180051392 TCTAG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 47923 5 + 100774 tctag i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 6502 5 - 218577 TCTAG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35547 5 + 74206 TCCAG i manLeu1.NW_012101728v1 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16285548 0 + 16417988 C e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=100.000000 s hg38.chr3_KI270934v1_alt 101851 1 + 163458 C s rheMac8.chr6 179822116 1 - 180051392 G i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 47928 1 + 100774 g i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 6507 1 - 218577 G i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35552 1 + 74206 G i manLeu1.NW_012101728v1 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16285548 0 + 16417988 C e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e nomLeu3.chr11 2883701 10 - 123690457 I e gorGor5.CYUI01002752v1 7813 284 - 41186 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=55361.000000 s hg38.chr3_KI270934v1_alt 101852 60 + 163458 TGATCCTGTTACACAGGTTAGAGAACCATGGCATTAGGGGTAGCAATTTGACAAttc----ttt s rheMac8.chr6 179822117 63 - 180051392 TGATCCTCTTACACAGGTTAGAGAACCAGGGCATTAGGGGTGGTAATTTGACAAttc-tttttt i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 47929 58 + 100774 tgatcctcttacacaggttagagaaccaGGGCATTA-GGGTGGTAATTTGACAAttc-----tt i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 6508 55 - 218577 TGATCCTCTTACACAGGTTAGAGAACCAGGGCATTAGGGGTGGTAATTTGAC----C-----tt i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35553 60 + 74206 TGATCCTCTTACACAGGTTAGAGAACCAGGGCATTAGGGGTGGTAATTTGAC----Cttttttt i manLeu1.NW_012101728v1 C 0 C 0 s saiBol1.JH378155 16285548 60 + 16417988 TGATCCTGTTACACACCTTGCAGAACCATGGcattagaggttgcaatctgacagttt----tct i saiBol1.JH378155 C 0 I 518 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e nomLeu3.chr11 2883701 10 - 123690457 I e gorGor5.CYUI01002752v1 7813 284 - 41186 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=10920.000000 s hg38.chr3_KI270934v1_alt 101912 12 + 163458 tttttttttttt s rheMac8.chr6 179822180 12 - 180051392 tttttttttttt i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 47987 12 + 100774 tttttttttttt i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 6563 12 - 218577 tttttttttttt i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35613 12 + 74206 tttttttttttt i manLeu1.NW_012101728v1 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16285608 518 + 16417988 I e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e nomLeu3.chr11 2883701 10 - 123690457 I e gorGor5.CYUI01002752v1 7813 284 - 41186 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=53477.000000 s hg38.chr3_KI270934v1_alt 101924 40 + 163458 gagacagagtctcactcttgttgcccaggctggagtgcag s gorGor5.CYUI01002752v1 8097 40 - 41186 gagacagagtctcactcttgttgcccaggctggagtgcag i gorGor5.CYUI01002752v1 I 284 C 0 s rheMac8.chr6 179822192 40 - 180051392 gagacagagtcttgctcttgttgcccagactggagtgcaa i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 47999 40 + 100774 gagacagagtcttgctcttgttgcccagactggagtgcaa i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 6575 40 - 218577 gagacagagtcttgctcttgttgcccagactggagtgcaa i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35625 40 + 74206 gagacagagtcttgctcttgttgcccagactggagtgcaa i manLeu1.NW_012101728v1 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16285608 518 + 16417988 I e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e nomLeu3.chr11 2883701 10 - 123690457 I e panPan2.chrUn_NW_014024201v1 160117 12 - 190779 I e panTro5.chr3 2571994 12 - 202621043 I a score=95565.000000 s hg38.chr3_KI270934v1_alt 101964 39 + 163458 tggcgcactctcggctcactgcaacctccgtctcccagg s panTro5.chr3 2572006 39 - 202621043 tggcgcactcttggctcactgcaacctccgtctcccagg i panTro5.chr3 I 12 C 0 s panPan2.chrUn_NW_014024201v1 160129 39 - 190779 tggcacactctcggctcactgcaacctccgtctcccagg i panPan2.chrUn_NW_014024201v1 I 12 C 0 s gorGor5.CYUI01002752v1 8137 39 - 41186 tggcgcactctcggctcactgcaacctccatctcccagg i gorGor5.CYUI01002752v1 C 0 C 0 s rheMac8.chr6 179822232 39 - 180051392 tggctcactctcggctcactgcaacctccgcctcccggg i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 48039 39 + 100774 tggctcactctcggctcactgcaacctctgcctcccggg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 6615 39 - 218577 tggctcactctcggctcactgcaacctccgcctcccggg i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35665 39 + 74206 tggctcactctcggctcactgcaacctccgcctcccagg i manLeu1.NW_012101728v1 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16285608 518 + 16417988 I e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=24918.000000 s hg38.chr3_KI270934v1_alt 102003 19 + 163458 ttcaagcaactctcctgcc s panTro5.chr3 2572045 19 - 202621043 ttcaaacaactctcctgct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 160168 19 - 190779 ttcaagcaactctcctgcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 8176 19 - 41186 ttcaagcaactctcctgcc i gorGor5.CYUI01002752v1 C 0 C 0 s cerAty1.NW_012004452v1 6654 19 - 218577 ttcaagcaattctcctgcc i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35704 19 + 74206 ttcaagcaattctcctgcc i manLeu1.NW_012101728v1 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 48078 0 + 100774 C e saiBol1.JH378155 16285608 518 + 16417988 I e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e rheMac8.chr6 179822271 0 - 180051392 C e nomLeu3.chr11 2883701 10 - 123690457 I a score=22860.000000 s hg38.chr3_KI270934v1_alt 102022 26 + 163458 tcagcctcctgagtagctgggattac s panTro5.chr3 2572064 26 - 202621043 tcagcctcctgagtagctgggattac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 160187 26 - 190779 tcagcctcctgagtagctgggattac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 8195 26 - 41186 tcagcctcctgagtagctgggattac i gorGor5.CYUI01002752v1 C 0 C 0 s manLeu1.NW_012101728v1 35723 26 + 74206 tcaacctcccaaatagctgggattac i manLeu1.NW_012101728v1 C 0 I 3 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 48078 0 + 100774 C e saiBol1.JH378155 16285608 518 + 16417988 I e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e cerAty1.NW_012004452v1 6673 0 - 218577 C e rheMac8.chr6 179822271 0 - 180051392 C e nomLeu3.chr11 2883701 10 - 123690457 I a score=47775.000000 s hg38.chr3_KI270934v1_alt 102048 86 + 163458 aggcacccatcatcatgcctggctaattttttgtatttttagagatggggtttcactatgttggccaggctggGACAattcttaaa s panTro5.chr3 2572090 86 - 202621043 aggcacccaccatcatgcctggctaattttttgtatttttagagatggggtttcactatgttggccaggctggGACAATTCTTAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 160213 86 - 190779 aggcacccaccatcatgcctagctaattttttgtatttttagagatggggtttcactatgttggccaggctggGACAATTCTTAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 8221 86 - 41186 aggcacccaccatcatgcctggttaattttttgtatttttagagatggggtttcactatgttggccaggctggGACAATTCTTAAA i gorGor5.CYUI01002752v1 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 48078 0 + 100774 C e saiBol1.JH378155 16285608 518 + 16417988 I e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933220 90 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e manLeu1.NW_012101728v1 35749 3 + 74206 I e cerAty1.NW_012004452v1 6673 0 - 218577 C e rheMac8.chr6 179822271 0 - 180051392 C e nomLeu3.chr11 2883701 10 - 123690457 I a score=35882.000000 s hg38.chr3_KI270934v1_alt 102134 53 + 163458 ctgtcattctttactcacttacttgcaggaattcttat--gtaaagaactttccc s panTro5.chr3 2572176 53 - 202621043 ctgtcattctttactcacttatttgcaggaattcttat--gtaaagaactttccc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 160299 53 - 190779 ctgtcattctttactcacttatttgcaggaattcttat--gtaaagaactttccc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 8307 53 - 41186 ctgtcattctttactcacttatttgcaggaattcttat--gtaaagaactttccc i gorGor5.CYUI01002752v1 C 0 C 0 s canFam3.chr34 11933310 51 + 42124431 ctatcattccttactcctttatctat----tttattatccataaaatacttttcc i canFam3.chr34 I 90 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 48078 0 + 100774 C e saiBol1.JH378155 16285608 518 + 16417988 I e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e otoGar3.GL873745 2106000 263 - 2165740 I e manLeu1.NW_012101728v1 35749 3 + 74206 I e cerAty1.NW_012004452v1 6673 0 - 218577 C e rheMac8.chr6 179822271 0 - 180051392 C e nomLeu3.chr11 2883701 10 - 123690457 I a score=267912.000000 s hg38.chr3_KI270934v1_alt 102187 255 + 163458 taatcaacaaggtttccctgaattgcaatttgtagagaaaagacaggataattact----gatcttccttcaagtgtccattcccagtgttaggagttagtgccctaggtacctccaagagtgaccaattacatgtgtttgtttggtt----ttggc-----tttgaaaccaccactatgaat--------tcatggttttCATGTAtt-------------------agaga-------------------ccactttctaggtgcttgatgtgtctactgctactggggcagaggtagaaaatgtgtctacg s panTro5.chr3 2572229 259 - 202621043 taatcaacaaggtttccctgaattgcagtttgtagagaaaagacaggataattgct----gatcttccttcaagtgtccattcccagtgttaggagttagtgccctgggtacctccaagagtgaccaatTACATGTGTTTGGTTGGTTGGTTTCGGC-----TTTGGAACCATCACTATCAAT--------TCACGGTTTTCATGTATT-------------------ACAGA-------------------CCACTTTCTAGGTGCTTGATGTGTCTACTGCTACTGgggcagaggtagaaaatgtgtatacg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 160352 259 - 190779 taatcaacaaggtttccctgagttgcaatttgtagagaaaagaaaggataattgct----gatcttccttcaagtgtccattcccagtgttaggagttagtgccctgggtacctccaagagtgaccaattacatgtttttgttTGGTTGGTTTCGGC-----TTTGAAACCATCACTATGAAT--------TCACGGTTTTCATGTAtt-------------------agaga-------------------ccactttctaggtgcttgatgtgtctactgctactggggcagaggtagaaaatgtgtatacg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 8360 259 - 41186 taatcaacaaggtttccctgaattgcaatttgtagagaaaagacaagataattgct----gatcttccttcaagtgtccattcccagtgttaggagttagtgccctagatacctccaagagtgaccaatTACATGTGTTTGGTTGGTTGGTTTCGGC-----TTTGAAACCATCACTATCAAT--------TCACGGTTTTCATGTATT-------------------ACAGA-------------------CCACTTTCTAGGTGCTTGATGTGTCTACTGCTACTGgggcagaggtagaaaatgtgtctatg i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2883711 259 - 123690457 TAatcaacaaggtttccctgaattgcaatttgtagagaaaaggcaggataatcact----gatcttccttcaagtatccattcccagtgttaggagttagtgccctaggtacctccaagagtgaccaatTACATGTGTTTGTTTGGCTGGTTTTGGC-----TTTGAAACCATCACTATGAAT--------TCATGGTTTTCATATAtt-------------------agaga-------------------ccactttctaggtgcttgatgtgtctactgctactggggcagagctaggaaatgtgtctacg i nomLeu3.chr11 I 10 C 0 s canFam3.chr34 11933361 298 + 42124431 taatcaactaggttatcctgaatggcaatttgtggattaaaggcaggataaccatttcactattttcctctaattgtccattttcagtattagtagttagtgccctagttacttccaaaagtga--------------ttgtttgctcagtgttggctgagtttttaaactatcattataaatgaacatactaatgtttttaatATAGTCAATCTGTGGCTATGGGGGAGAGAGGGCAGTGGTAAGCAGACCCCACAATCAGGGTGCTTA--GAGCCCACTGCTACTGGGGCAGAGAGGGGCAgtgtgtgtgtg i canFam3.chr34 C 0 I 73 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 48078 0 + 100774 C e saiBol1.JH378155 16285608 518 + 16417988 I e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e otoGar3.GL873745 2106000 263 - 2165740 I e manLeu1.NW_012101728v1 35749 3 + 74206 I e cerAty1.NW_012004452v1 6673 0 - 218577 C e rheMac8.chr6 179822271 0 - 180051392 C a score=67651.000000 s hg38.chr3_KI270934v1_alt 102442 79 + 163458 gtaaaagaacaacaaatgagttcacgcttatatttctatttcaaatttagtatacggttttacacctttttctcagaaa s panTro5.chr3 2572488 79 - 202621043 gtaaaagaacaacaaatgagttcacgcttatatttgtatttcaaatttagtatatggttttacacctttttcaaagaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 160611 79 - 190779 gtaaaagaacaacaaatgagttcacgcttatatttctatttcaaatttagtatatggttttacacctttttcaaagaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 8619 79 - 41186 gtaaaagaacaacaaatgggttcacgcttatatttctatttcaaatttagtatatggttttacacctttttctcagaaa i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2883970 79 - 123690457 tgaaaagaacaacaaatgagttcacgcttatatttctatttcaaatttagtatatggttttacacctttttctcagaaa i nomLeu3.chr11 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 48078 0 + 100774 C e saiBol1.JH378155 16285608 518 + 16417988 I e calJac3.chr2 204143298 588 + 204313951 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933659 73 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e manLeu1.NW_012101728v1 35749 3 + 74206 I e cerAty1.NW_012004452v1 6673 0 - 218577 C e rheMac8.chr6 179822271 0 - 180051392 C a score=1911.000000 s hg38.chr3_KI270934v1_alt 102521 1 + 163458 a s panTro5.chr3 2572567 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 160690 1 - 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 8698 1 - 41186 a i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2884049 1 - 123690457 a i nomLeu3.chr11 C 0 C 0 s calJac3.chr2 204143886 1 + 204313951 a i calJac3.chr2 I 588 C 0 s saiBol1.JH378155 16286126 1 + 16417988 a i saiBol1.JH378155 I 518 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 48078 0 + 100774 C e cebCap1.NW_016108150v1 71200 746 - 306014 I e canFam3.chr34 11933659 73 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e manLeu1.NW_012101728v1 35749 3 + 74206 I e cerAty1.NW_012004452v1 6673 0 - 218577 C e rheMac8.chr6 179822271 0 - 180051392 C a score=94042.000000 s hg38.chr3_KI270934v1_alt 102522 95 + 163458 atcttgttttattttttgagatagagttttgttcctgttgcccaggctggagtgcagtggcacaatctcggctcactgcaatctctgcctcctgt s panTro5.chr3 2572568 95 - 202621043 atcttgttttattttttgagatagagttttgttcctgttgcccaggctggagtgcagtggcacaatctcggctcactgcaatctctgcctcctgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 160691 95 - 190779 atcttgttttattttttgagatagagttttgttcctgttgcccaggctggagtgctgtggcacaatctcggctcactgcaatctccgcctcctag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 8699 95 - 41186 atcttgttttattttttgagatacagttttgttcctgttgcccaggctggagtgcagtggcacaatctcggctcactgcaatctccgcctcctgg i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2884050 95 - 123690457 atctttttttattttttgaggtagagttttgttcctgttgcccaggctggagtgccgtggcacagtctcggctcactgcaatctctgcctcctgg i nomLeu3.chr11 C 0 C 0 s calJac3.chr2 204143887 63 + 204313951 attttgtatttttagtagagacagagtttc-tccatattgctcaggctgg-------------------------------tcttgaactcctga i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 16286127 63 + 16417988 attttgtatttttagcagagacggagtttc-tccatattgctcaggctgg-------------------------------tcttgaactcccga i saiBol1.JH378155 C 0 I 1 s canFam3.chr34 11933732 79 + 42124431 gccttggctcaggtcatgatataggggt------------cccgggattgagccctgcgttgggttccctgcttggtggagagtctgcttc---- i canFam3.chr34 I 73 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 48078 0 + 100774 C e cebCap1.NW_016108150v1 71200 746 - 306014 I e otoGar3.GL873745 2106000 263 - 2165740 I e manLeu1.NW_012101728v1 35749 3 + 74206 I e cerAty1.NW_012004452v1 6673 0 - 218577 C e rheMac8.chr6 179822271 0 - 180051392 C a score=41123.000000 s hg38.chr3_KI270934v1_alt 102617 19 + 163458 ttcaagcgattctcctgct s panTro5.chr3 2572663 19 - 202621043 ttaaagcgattctcctgct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 160786 19 - 190779 ttcaagcgactctcctgct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 8794 19 - 41186 ttcaagtgactctcctgct i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2884145 19 - 123690457 ttcaagcgattctcctgcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179822271 19 - 180051392 ttcaagtgattctcctgcc i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 48078 19 + 100774 ttcaagtgattctcctacc i macNem1.NW_012013899v1 C 0 C 0 s calJac3.chr2 204143951 18 + 204313951 ctcaggtga-tctactgct i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 16286191 18 + 16417988 ctcaggtga-tctactgct i saiBol1.JH378155 I 1 C 0 s canFam3.chr34 11933811 10 + 42124431 ---------tccctctccc i canFam3.chr34 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e otoGar3.GL873745 2106000 263 - 2165740 I e manLeu1.NW_012101728v1 35749 3 + 74206 I e cerAty1.NW_012004452v1 6673 0 - 218577 C a score=86088.000000 s hg38.chr3_KI270934v1_alt 102636 26 + 163458 tcagcctccccaatagctgggattac s panTro5.chr3 2572682 26 - 202621043 tcagcctccccaacagctgggattac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 160805 26 - 190779 tcagcctccccaacagctgggattac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 8813 26 - 41186 tcagcctccccaatagctgggattac i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2884164 26 - 123690457 tcagcctcccaaacagctgggattac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179822290 26 - 180051392 tcaacctcccaaatagctgggattac i rheMac8.chr6 C 0 I 3 s macNem1.NW_012013899v1 48097 26 + 100774 tcaacctcccaaatagctgggattac i macNem1.NW_012013899v1 C 0 I 3 s cerAty1.NW_012004452v1 6673 26 - 218577 tcaacctcccaaatagctgggattac i cerAty1.NW_012004452v1 C 0 I 3 s calJac3.chr2 204143969 26 + 204313951 ttggcttcccaatgtgctgggattac i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16286209 26 + 16417988 tcggcttcccaaagtgctgggattac i saiBol1.JH378155 C 0 C 0 s canFam3.chr34 11933821 13 + 42124431 tctgcccctccaa------------- i canFam3.chr34 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e otoGar3.GL873745 2106000 263 - 2165740 I e manLeu1.NW_012101728v1 35749 3 + 74206 I a score=127408.000000 s hg38.chr3_KI270934v1_alt 102662 34 + 163458 aggcacctgccaccatgcccag-ctaatttttcaa s panTro5.chr3 2572708 34 - 202621043 aggcacctgccaccatgcccag-ctaatttttcaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 160831 34 - 190779 aggcacctgccaccatgcccag-ctaatttttcaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 8839 34 - 41186 aggcacctgccaccatgcccag-ctaatttttcaa i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2884190 34 - 123690457 aggcacctaccaccatgcccag-ctaattttggaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179822319 34 - 180051392 aggcacctgccaccatgcccag-ctaatttttgaa i rheMac8.chr6 I 3 C 0 s macNem1.NW_012013899v1 48126 34 + 100774 aggcacctgccaccatgcccag-ctaatttttgaa i macNem1.NW_012013899v1 I 3 C 0 s cerAty1.NW_012004452v1 6702 34 - 218577 aggcacctgccaccatgcccag-ctaatttttgaa i cerAty1.NW_012004452v1 I 3 C 0 s manLeu1.NW_012101728v1 35752 34 + 74206 aggcacctgccaccatgcccag-ctactttttgaa i manLeu1.NW_012101728v1 I 3 C 0 s calJac3.chr2 204143995 35 + 204313951 aggtgtgagccactgcgcctggcctaatttttgta i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 16286235 35 + 16417988 aggtgtgagccactgcgcctggcctaatttttgta i saiBol1.JH378155 C 0 I 1 s canFam3.chr34 11933834 15 + 42124431 ------------------ctag--tgatttctcaa i canFam3.chr34 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 116636 740 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e cebCap1.NW_016108150v1 71200 746 - 306014 I e otoGar3.GL873745 2106000 263 - 2165740 I a score=44044.000000 s hg38.chr3_KI270934v1_alt 102696 6 + 163458 ttttag s panTro5.chr3 2572742 6 - 202621043 ttttag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 160865 6 - 190779 ttttag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 8873 6 - 41186 ttttag i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2884224 6 - 123690457 ttttag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179822353 6 - 180051392 ttttag i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 48160 6 + 100774 ttttag i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 6736 6 - 218577 ttttag i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35786 6 + 74206 ttttag i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204144031 6 + 204313951 ttttag i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 16286271 6 + 16417988 ctttag i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 71946 6 - 306014 ttttag i cebCap1.NW_016108150v1 I 746 C 0 s aotNan1.NW_018494784v1 117376 6 - 211231 ttttag i aotNan1.NW_018494784v1 I 740 C 0 s canFam3.chr34 11933849 6 + 42124431 tctcaa i canFam3.chr34 C 0 I 59 e mm10.chr13 74319377 2341 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e otoGar3.GL873745 2106000 263 - 2165740 I a score=542427.000000 s hg38.chr3_KI270934v1_alt 102702 92 + 163458 tagagatg-gcgtttcaccatgttggccaggctggtctcaaactcctgacctcaggtcatctgcccacctcggcctccc-aaagtgctgggact s panTro5.chr3 2572748 92 - 202621043 tagagatg-gggtttcaccatgttggccaggctggtctcaaactcctgacgtcaggtcatctgcccgcctcggcctccc-aaagtgctgggatt i panTro5.chr3 C 0 I 13 s panPan2.chrUn_NW_014024201v1 160871 91 - 190779 tagagatg-gggtttcactatgttggccaggctggtctcaaactcctgacctcaggtcatctgcccgcctcggcctccc-aaagtg-tgggatt i panPan2.chrUn_NW_014024201v1 C 0 I 13 s gorGor5.CYUI01002752v1 8879 92 - 41186 tagagatg-gggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatctgtctgcctcggcctccc-aaagtgctgggatt i gorGor5.CYUI01002752v1 C 0 I 5 s nomLeu3.chr11 2884230 92 - 123690457 tagagata-gggtttcaccatgctggccaggctggtctcgaactcctggcctcaggtgatctgcccacctcggcctccc-aaagtgctgggatt i nomLeu3.chr11 C 0 I 5 s rheMac8.chr6 179822359 92 - 180051392 tagagatg-cggtttcaccatgttggctacgctggtcttgaactcctggcctcaggtgatctgcccgcctcggcctccc-aaagtgccgggatt i rheMac8.chr6 C 0 I 36 s macNem1.NW_012013899v1 48166 92 + 100774 tagagatg-cggtttcaccatgttggctacgctggtcttgaactcctggcctcaggtgatctgcccgcctcggcctccc-aaagtgccgggatt i macNem1.NW_012013899v1 C 0 I 36 s cerAty1.NW_012004452v1 6742 92 - 218577 tagagatg-cggtttcaccatgttggctacgctggtcttgaactcctggcctcaggtgatctgcccgcctcggcctccc-aaagtgctgggatt i cerAty1.NW_012004452v1 C 0 I 36 s manLeu1.NW_012101728v1 35792 92 + 74206 tagagatg-cggtttcaccatgttggctacgctggtcttgaactcctggcctcaggtgatctgcccgcctcggcctccc-aaagtgctgggatt i manLeu1.NW_012101728v1 C 0 I 36 s calJac3.chr2 204144037 94 + 204313951 tagagacaggggtttcaccatgttggccacggcggtctcaaactgctgacctcaggtgacctgcccgcctcagcctcccaaaagtgctgggatt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16286277 91 + 16417988 tagagaca--ggtttccccatattggccacggcagtctcaaactgccgacttcaggtggcctgcccgcctcagcctccc-aaagtgctgggatt i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 71952 93 - 306014 tagagacaggggtttcaccatgttggccatggtggtctccaactgctgacctcaggtagcctgcccgcctcagcctccc-aaagtgctgggatt i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 117382 93 - 211231 tagagacaggggtttcaccatgttggccacagcggtctcaaactgctgaactcaggtgacctgcccgcctcagcctccc-aaagtgctgggatt i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11933855 59 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I a score=-4701.000000 s hg38.chr3_KI270934v1_alt 102794 1 + 163458 -t s gorGor5.CYUI01002752v1 8976 1 - 41186 -t i gorGor5.CYUI01002752v1 I 5 C 0 s nomLeu3.chr11 2884327 1 - 123690457 -t i nomLeu3.chr11 I 5 C 0 s calJac3.chr2 204144131 1 + 204313951 a- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16286368 1 + 16417988 a- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 72045 1 - 306014 a- i cebCap1.NW_016108150v1 C 0 I 19 s aotNan1.NW_018494784v1 117475 1 - 211231 a- i aotNan1.NW_018494784v1 C 0 I 19 e mm10.chr13 74319377 2341 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 48258 36 + 100774 I e canFam3.chr34 11933855 59 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e manLeu1.NW_012101728v1 35884 36 + 74206 I e cerAty1.NW_012004452v1 6834 36 - 218577 I e rheMac8.chr6 179822451 36 - 180051392 I e panPan2.chrUn_NW_014024201v1 160962 13 - 190779 I e panTro5.chr3 2572840 13 - 202621043 I a score=-1410.000000 s hg38.chr3_KI270934v1_alt 102795 6 + 163458 gggagg- s gorGor5.CYUI01002752v1 8977 6 - 41186 gtgagc- i gorGor5.CYUI01002752v1 C 0 I 1 s nomLeu3.chr11 2884328 6 - 123690457 gtgagc- i nomLeu3.chr11 C 0 I 1 s calJac3.chr2 204144132 6 + 204313951 -caggca i calJac3.chr2 C 0 I 6 s saiBol1.JH378155 16286369 6 + 16417988 -caggcg i saiBol1.JH378155 C 0 I 6 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 117476 19 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 48258 36 + 100774 I e cebCap1.NW_016108150v1 72046 19 - 306014 I e canFam3.chr34 11933855 59 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e manLeu1.NW_012101728v1 35884 36 + 74206 I e cerAty1.NW_012004452v1 6834 36 - 218577 I e rheMac8.chr6 179822451 36 - 180051392 I e panPan2.chrUn_NW_014024201v1 160962 13 - 190779 I e panTro5.chr3 2572840 13 - 202621043 I a score=4136.000000 s hg38.chr3_KI270934v1_alt 102801 7 + 163458 attttcc s panTro5.chr3 2572853 7 - 202621043 accatac i panTro5.chr3 I 13 C 0 s panPan2.chrUn_NW_014024201v1 160975 7 - 190779 actgcac i panPan2.chrUn_NW_014024201v1 I 13 C 0 s gorGor5.CYUI01002752v1 8984 7 - 41186 accataa i gorGor5.CYUI01002752v1 I 1 C 0 s nomLeu3.chr11 2884335 7 - 123690457 accgcac i nomLeu3.chr11 I 1 C 0 s calJac3.chr2 204144144 7 + 204313951 accactc i calJac3.chr2 I 6 C 0 s saiBol1.JH378155 16286381 7 + 16417988 accactc i saiBol1.JH378155 I 6 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 117476 19 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 48258 36 + 100774 I e cebCap1.NW_016108150v1 72046 19 - 306014 I e canFam3.chr34 11933855 59 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e manLeu1.NW_012101728v1 35884 36 + 74206 I e cerAty1.NW_012004452v1 6834 36 - 218577 I e rheMac8.chr6 179822451 36 - 180051392 I a score=47735.000000 s hg38.chr3_KI270934v1_alt 102808 18 + 163458 cttgccagaaaaatctta s panTro5.chr3 2572860 18 - 202621043 ctggccagaaatatcttc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 160982 18 - 190779 ctggccagaaaaatctta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 8991 18 - 41186 ctggccagaaaaatctta i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2884342 18 - 123690457 ctggccagaaaaatctta i nomLeu3.chr11 C 0 C 0 s calJac3.chr2 204144151 18 + 204313951 ctggccAGAAAAATCTTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16286388 18 + 16417988 ctggccAGAaaaatctta i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 72065 14 - 306014 ctggccAGAAAAAT---- i cebCap1.NW_016108150v1 I 19 C 0 s aotNan1.NW_018494784v1 117495 18 - 211231 ctggccAGAaaaatatta i aotNan1.NW_018494784v1 I 19 C 0 e mm10.chr13 74319377 2341 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 48258 36 + 100774 I e canFam3.chr34 11933855 59 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I e manLeu1.NW_012101728v1 35884 36 + 74206 I e cerAty1.NW_012004452v1 6834 36 - 218577 I e rheMac8.chr6 179822451 36 - 180051392 I a score=94018.000000 s hg38.chr3_KI270934v1_alt 102826 14 + 163458 gttttagcattaac s panTro5.chr3 2572878 14 - 202621043 attttagcattaac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 161000 14 - 190779 gttttagcattaac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 9009 14 - 41186 gttttagcatgaac i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2884360 14 - 123690457 gttttagcattaac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179822487 14 - 180051392 GTTTTAGcattaac i rheMac8.chr6 I 36 C 0 s macNem1.NW_012013899v1 48294 14 + 100774 GTTTTAGcattaac i macNem1.NW_012013899v1 I 36 C 0 s cerAty1.NW_012004452v1 6870 14 - 218577 GTTTTAGcattaac i cerAty1.NW_012004452v1 I 36 C 0 s manLeu1.NW_012101728v1 35920 14 + 74206 GTTTTAGcattaac i manLeu1.NW_012101728v1 I 36 C 0 s calJac3.chr2 204144169 14 + 204313951 CTTTTAGCATTAAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16286406 14 + 16417988 gttttaacattaac i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 72079 14 - 306014 GTTTTAGcattaac i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 117513 14 - 211231 gttttagcattaac i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11933855 59 + 42124431 I e otoGar3.GL873745 2106000 263 - 2165740 I a score=1706063.000000 s hg38.chr3_KI270934v1_alt 102840 283 + 163458 ataattagttatttgctttaactcccaccccacataatttcaaaggattaatacctataagacgagtaac--ggagatgattgattgaaatttagga-ttc--agtggctctatttgtctttagactatggctcactaaatctgcacactt-gaagtgctgtgttctagcgatcctctgatgacacatgaagtaataggctgc----gtgactgtcaccagcctgatgtgcagttgggctGCAGAACCCCGTGATGCTGCCTAGCCCAGCCAGCCCCAGGTCACTCCTCAGAC s panTro5.chr3 2572892 283 - 202621043 ataattagttattagctttaactcccaccccacataatttcaaaggattaataccaataagacgagtaag--ggagatgattgattgaaatttagga-ttc--agtggctctatttgtctttagactatgactcactaaatctgcacactt-gaagtgctgtgttctagcgatgctctgacgacacatgaagtaataggctgc----gtgactgtcaccagcctgatgtgcagttgggctGCAGAACCCTGTGATGCTGCCTAGCCCAGCCAGCCCCAGGTCACTCCTCAGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 161014 281 - 190779 ataattagttattagctttaactcccaccccacgtaatttcaaaggattaataccaataagacaagtaac--ggagatgattgattgaaatttagga-ttc--agtggctctatttgtctttagactatggctcactaaatctgcacactt-gaagtgctgtgttctagcgatc--ctgatgacacatgaggtaataggctgc----gtgactgtcaccagcctgatgtgcagttgggctGCAGAACCCTGTGATGCTGCCTAGCCCAGCCAGCCCCAGGTCACTCCTCAGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 9023 283 - 41186 ataattagttattagctttaactcccaccccatataatttcaaaggattaataccaataagacgagtaac--ggagatgattgattgaaatttagga-ttc--agtggctctatttgtctttagactatggctcactaaatctgcacactt-gaagtgctgtgttctagcgatcctctgacgacacatgaagtaataggctgc----gtgactgtcaccagcctgatgtgcacttgggctGCAGAAACCCGTGATGCTGCCTAGCCCAGCCAGCCCCAGGTCACTCCTCAGAC i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2884374 281 - 123690457 ataattagttattagctttaactcccaccccacataatttcaaaggattaattccaataagacaagtaacaaggagatgattgattgaaatttagga-ttt--agtggctctatttgtctttagactatggctcactaaatctgcacactt-gaagtgctgtgttctaGCGATGCTCTGATGACACATG----AATAGGTGGC----GTGACTGTCACCAGCCTGATGTGCAGCTGGGCTGCAGAACCCCATGATGCTGCCTAGCCCAGCCAGCCCCAGGTCACTCCTCAGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179822501 276 - 180051392 ataattagttattagctttaactcccaccccacataatttcaaa-gattaataccaataagacaagtaac-----aatgattgattgaaatttaggatttc--agtggctctatttgtctttagactatggctcactaaatctgcacactt-gaagtgctgtgttctaGCGATGTTCTGACGACACACG----AATAGGCTGT----GTGACTGTCACCAGCCTGATGTGCACTTGGGCTGCGGAAACCCATGATGCTGCCTAGCCCAGCCAGCCCCCGGTCACTCATCAGAT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 48308 277 + 100774 ataattagttattagctttaactcccaccccacataatttcaaaggattaataccaataagacaagtaac-----aatgattgattgaaatttaggatttc--agtggctctatttgtctttagactatggctcactaaatctgcacactt-gaagtgctgtgttctaGCGATGTTCTGACGACACACG----AATAGGCTGT----GTGACTGTCACCAGCCTGATGTGCACTTGGGCTGCAGAAACCCATGATGCTGCCTAGCCCAGCCAGCCCCCGGTCACTCATCAGAT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 6884 277 - 218577 ataattagttattagctttaactcccaccccacataatttcaaaggattaataccagtaagacaagtaac-----aatgattgattgaaatttaggatttc--agtggctctatttgtctttagactatggctcactaaatctgcacactt-gaagtgctgtgttctaGCGATGTTCTGACGACACATG----AATAGGCTGT----GTGACCGTCACCAGCCTGATGTGCACTTGGGCTGCAGAAACCCGTGATGCTGCCTAGCCCAGCCAGCCCCAGGTCACTCCTCAGAT i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35934 277 + 74206 ataattagttattagctttaactcccaccccacataatttcaaaggattaataccaataagacaagtaac-----aatgattgattgaaatttaggatttc--agtggctctatttgtctttagactatggctcactaaatctgcacactt-gaagtgctgtgttctaGCGATGTTCTGACGACACATG----AATAGGCTGT----GTGACCGTCACCAGCCTGATGTGCACTTGGGCTGCAGAAACCCGTGATGCTGCCTAGCCCAGCCAGCCCCAGGTCACTCCTCAGAT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204144183 247 + 204313951 ATAATTAGTTATTAGCGTCAACTCCCACCACACGTAAGTTCAAAGGGTTAATACCAATAAGACAAGTAACAGTGAGATGATGGATTCAAATTTAGGATTTC--AG-----------------------TGGCTCACTGAATTTGCACACTT-GAAGTGCTGTGTCCT-GAGAT---------------GAAATCACAGGCTGC----GTGACTGTCAGCAGCCTCCTGTGCAGCTGGGCTGCAGAAACCCGTGGTGCTGCCCGGCCCAGCCAGTGCCAGGGCACTCCTCAGAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16286420 281 + 16417988 acaattagttattagcttcaactcccaccacacgtaagttcaaagggttaataccaataagacaagtaacaatgagatgattgatt-gaatttgggatgtc--agtggctctatttgtcttttgactatggctcactgactttgcacactt-gaagtgcggtgttctagagGT---CTGACGACGCA-GGAATCACAGGCTGC----GTGGCCATCACCAGCCTGACGTGCAACTGGGCCGCAGAAACCCATGATGCTGCCTGGCCCAGCCAGCGCCAGGGCACTCCTCAGAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 72093 280 - 306014 ataattagttattagcttcaactcccaacacacgtaagttcaaagggttaataccaataagacaagtaacaatgagatgattgattgaaatttaggatttc--agtggctctatttgtctttagactatggctcactgaatttgcacactt-gaagtgctgtgttctagagGTGGTCTGACGACGCATGGAATCACAGGCTGC----GTGACTATCACTGGCCTGATATGCAGCTGGGCTGCAGAAACCCATGATGCTGCCTGGCCCAGCCAGCGCCAGGGCACTC------C i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 117527 286 - 211231 ataattagatattagcttcaactcccaccacacatgagttcaaagggttaataccaataagacaagtaataatgcgatgattgattgaaatttaggatttc--agtggctctatttgtctttagactatggctcactgaatttgcacactt-gaagtgctgtgttctagagATGGTCTGACGATGCATGGACTCACAGGCTGT----GTGACTATCCCCAGCCTGATGTGCAGCTGGGCCGCAGAAACCCACGATGCTGCCTAGCCCAGCCAGCGCCAGGGCACTCCTCGGAC i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 11933914 269 + 42124431 atactta-ttactagctttaacttacactacac--aatttcaaagtatgaacaccaatatccctagtaacagtaagactgctga-tgaaacataggctttcttagtggtttcatttatccttaaa-----gtttactgaaactgtaaactcagaagttctatgttcta-----------atgccacttgaaatgacactctcctcttgtgacagtcacca-tttgatctgcagctgggttGCAGACACTC--GATGCTGCATGGTCTGGAACTCCCCCAG-CACTCACCAGAC i canFam3.chr34 I 59 C 0 e mm10.chr13 74319377 2341 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e otoGar3.GL873745 2106000 263 - 2165740 I a score=427673.000000 s hg38.chr3_KI270934v1_alt 103123 77 + 163458 TCAAACTCGATTCTGACACCACCAGCACCCGGGACGCTGCCTAGGGGCTTTCTCTGGTGGCAGCAGCATGTCCTGGA s panTro5.chr3 2573175 77 - 202621043 TCAAACTCGATTCTGACACCATCAGCACCCGGGACGCTGCCTAGGGGCTTTCCCTGGTGGCAGAAGCACGTCCTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 161295 77 - 190779 TCAAACTCGATTCTGACACCACCAGCACCCGGGACGCTGCCTAGGGGCTTTCTCTGGTGGCAGGAGCATGTCCTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 9306 77 - 41186 TCAAACTCGATTCTGACACCACCAGCACCCGGGACGCTGCCTAGGGGCTTTCTCTGGTGGCAGGAGCATGTCCTGGA i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2884655 77 - 123690457 TCAAACTCGATCCTGACACCACCAGCACCCAGGACGCTGCCTAGGGGCTTTCTCTGGTGGCAGGAGCACGTCCTGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179822777 77 - 180051392 TCCAACTGGATTCTGACACCACAAGCACCCGGGACGCTGCCTAGGAGCTTTCTCTGGTGGCAGGAGTACATCCTGGA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 48585 77 + 100774 TCCAACTGGATTCTGACACCACAAGCACCCGGGACGCTGCCTAGGAGCCTTCTCTGGTGGCAGGAGTACATCCTGGA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 7161 74 - 218577 TCCAACTGGATTCTGACACCACAAGCACCTGGGACGCCGCCT---AGCTTTCTCTGGTGGCAGGAGTACGTCCTGGA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 36211 74 + 74206 TCCAACTGGATTCTGACACCACAAGCACCTGGGACGCCGCCT---AGCTTTCTCTGGTGGCAGGAGTACGTCCTGGA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204144430 61 + 204313951 TCAAACTGGATTCTGACGCCAC-AGCACCCGGGATGCTACCTA-GGGCTTTCTCTGCTGGCAG-------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16286701 64 + 16417988 TCAAACTGGATTCCGACACCAC-GGCACCCAGGACCTTCCCTAGGGGCCTTCTCTGCTGGATGGC------------ i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 72373 64 - 306014 TCAAACTGGATTCTGACGCCAC-AGCGCCCGGGACGCTACCTAGGGGCTTTCTCTGCGGGATGGA------------ i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 117813 76 - 211231 TCAAACTGGATTCTGACGCCAC-AGCACCCGGGACGCTACCTAGGGGCTTTCTCTGCTGGCAGGAGCATGTCCTGGA i aotNan1.NW_018494784v1 C 0 I 11 s otoGar3.GL873745 2106263 75 - 2165740 tCATACTGGTTTCTAATACAAGAAGCATCTGAGA--CTGCCTAGGGGGCTTCTCTGGTGGTAGCAGTGTGCCTTGGA i otoGar3.GL873745 I 263 C 0 s canFam3.chr34 11934183 65 + 42124431 -----CTGTACCTTCTTGCCCCAAGCACCTGTGATTCTGCTCAGGGTCTCTCTCTGGTGGTAGTGGTAGA------- i canFam3.chr34 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I a score=22884.000000 s hg38.chr3_KI270934v1_alt 103200 9 + 163458 GCAG-GCCAG s panTro5.chr3 2573252 9 - 202621043 GCAG-GCCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 161372 9 - 190779 GCAG-GCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 9383 9 - 41186 GCAG-GCCAG i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2884732 9 - 123690457 GCAG-GCCGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179822854 9 - 180051392 GTAG-GCTGG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 48662 9 + 100774 GTAG-GCTGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 7235 9 - 218577 GTAG-GCTGG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 36285 9 + 74206 GTAG-GCTGG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204144491 2 + 204313951 --------GA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16286765 9 + 16417988 GTGG-GCCGA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 72437 8 - 306014 GTGG-CT-GA i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2106338 9 - 2165740 ACAG-GCTGA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11934248 10 + 42124431 GTAGAGCCAG i canFam3.chr34 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e aotNan1.NW_018494784v1 117889 11 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I a score=20124.000000 s hg38.chr3_KI270934v1_alt 103209 3 + 163458 GGG s panTro5.chr3 2573261 3 - 202621043 GGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 161381 3 - 190779 GGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 9392 3 - 41186 GGG i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2884741 3 - 123690457 GGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179822863 3 - 180051392 GGG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 48671 3 + 100774 GGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 7244 3 - 218577 GGG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 36294 3 + 74206 GGG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204144493 3 + 204313951 GTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16286774 3 + 16417988 GTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 72445 3 - 306014 GTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 117900 3 - 211231 GAG i aotNan1.NW_018494784v1 I 11 C 0 s otoGar3.GL873745 2106347 3 - 2165740 GAG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11934258 3 + 42124431 GAG i canFam3.chr34 C 0 I 1339 e mm10.chr13 74319377 2341 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I a score=2020765.000000 s hg38.chr3_KI270934v1_alt 103212 312 + 163458 TGCCCGGAATTGACCATCCTGAACCTGTGCAGCGTG-GGCTGGTGAAGGAACGCACCAGCTCCCACAG-TGAACACGGGCCC-AGCTGTCCAC-ATGAGACCCGGCTCCCGGACGCCCCATGCTGCCG--CCTCTTTCCTGTCTCACCTCCCACTTCCCTTCAG-----CTGCTGCTCAGGGCCACCTTCCAAATTTTTGTCTCAGGGTTGGCGCC-TGTAGAATGCAATCCAAGGAATttagattcattcatttcagataccattctttcaattttagggactatcttaaaaactt-agtttggtaat-atgtaaaacacttaca s panTro5.chr3 2573264 312 - 202621043 TGCCCGGAATTGACCATCCTGAACCTGTGCAGCGTG-GGCTGGTGAAGGAACACACCAGCTCCCACAG-TGAGCACGGGCCC-AGCTGTCCAC-ATGGGACCCGGCTCCCGGACGCCCCGTGCCGCCG--CCTCTTTCCTGTCTCACCTCCCACTTCCCTTCAG-----CTGCTGCTCAGGGCCACCTTCCAAATTTTGGTCTCAGGGTTGGCGCC-TGTAGAATGCAATCCAAGGAATttagattcattcatttcagataccattctttcaattttagggactatcttaaaaactt-agtttggtaat-atgtaaaacacttaca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 161384 313 - 190779 TGTCTGGAATTGACCATCCTGAACCTGTGCAGCATG-GGCTGGTGAAGGAACACACCAGCTCCCACAG-TGAGCACGGGCCC-AGCTGCCCAC-GTGGGACCCGGCTCCCGGACGCCCCGTGCCACCG--CCTCTTTCCTGTCTCACCTCCCACTTCCCTTCAG-----CTGCTGCTCAGGGCCACCTTCCAAATTTTGGTCTCAGGGTTGGCGCC-TGTAGAATGCAATCCAAGGAATttagattcattcatttcagataccattctttcaattttagggactatcttagaaactt-agttgggtaataatgtaaaacacttaca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 9395 311 - 41186 TGCCCGGAATTGACCATCCTGAACCTGTGGAGCATG-GGCTGGTGAAGGAACACACCAGCTCCCACAG-TGAGCACGGGCCC-AGCTGTCCAC-ATGGGACCCGGCTCCCGGACGCCCCGTGCCACCG--CCTCTTTCCTATCTCACCT-CCACTTCCCTTCAG-----CTGCTGCTCAGGGCCACCTTCCAAATTTTGGTCTCAGGGTTGGAGCC-TGTAGAATACAATCCAAGGAATttagattcattcatttcagataccattctttcaattttagggactatcttaaaaactt-agtttggtaat-atgtaaaacacttaca i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2884744 311 - 123690457 TGCCCGGAATTGACCGTCCTGAGCCTGTGGAGCGTG-GGCTGGTGAAGGAACACACCAGCTCCCACAG-TGAGCACAGGCCC-AGCTGCCCAC-ATGGGACCTGGCT------CACCCCGTGCCGCCA--CCTCTTTCCTGTGTCACCTCCCGCTTCCCTTCAGCAGCCCTGCTGCTCAGGGCCACCTTCCAAATTTTGGTCTCAGGGTTGGCACC-TGTAGAATGCAATCCAAGGAATAtagattcattcatttcagatactattctttcaattttagggactatcttaaaaactt-agtttggtaat-atgtaaaacacttaca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179822866 312 - 180051392 TGCCTGGAATTGACCGTCCTGAACCTGTGGAGCGTT-GGCTGGTGAAGGAACGCACCAGCTCCCACAG-TGAGCACGGGCCC-AGCTGCCCTT-GTGGGACCTGGCTCCTGGACGCCCCACGACACCA--CCTCTTTCCTGTCCCACCTCCTGCTTCCCTTCAG-----CTAGTGCTCAGGGCCACCTTCCAAATTTTGATCTCAGGGTTGGTGCC-TGTAGAATGCAATCCAAGGAATTTAGATTCATTCATTTCAGATACTATTCTTTCAATTTTAGGGACTATCTTAAAAACTT-AGTTTGGTAAT-ATGTAAAACATTTAAA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 48674 312 + 100774 TGCCTGGAATTGACCGTCCTGAACCTGTGGAGCGTT-GGCTGGTGAAGGAACGCACCAGCTCCCACAG-TGAGCACGGGCCC-AGTTGCCCTT-GTGGGACCTGGCTCCTGGATGCCCCACGACACCA--CCTCTTTCCTGTCCCACCTCCTGCTTCCCTTCAG-----CTACTGCTCAGGGCCACCTTCCAAATTTTGATCTCAGGGTTGGTGCC-TGTAAAATGCAATCCAAGGAATTTAGATTCATTCATTTCAGATACTATTCTTTCAATTTTAGGGACTATCTTAAAAACTT-AGTTTGGTAAT-ATGTAAAACATTTAAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 7247 312 - 218577 TGCCTGGAATTGACCGTCCTGAACCTGTGGAGTGTT-GGCTGGTGAAGGAACGCACCAGCTCCCACAG-TGAGCACGGGCCC-AGCTGCCCTT-GTGGGACCTGGCTCCTGGACGCCCCACGACACCA--CCTCTTTCCTGTCCCACCTCCTGCTTCCCTTCAG-----CTACTGCTCAGGGCCACCTTCCAAATTTTGATCTCAGGGTTGGTGCC-TGTAGAATGCAATCCAAGGAATttagattcattcatttcagatactattctttcaattttagggactatcttaaaaactt-agtttggtaat-atgtaaaacatttaaa i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 36297 312 + 74206 TGCCTGGAATTGACCGTCCTGAACCTGTGGAGCGTT-GGCTGGTGAAGGAACGCACCAGCTCCCACAG-TGAGCACGGGCCC-AGCTGCCCTT-GTGGGACCTGGCTCCTGGACGCCCCACGACACCA--CCTCTTTCCTGTCCCACCTCCTGCTTCCCTTCAG-----CTACTGCTCAGGGCCACCTTCCAAATTTTGATCTCAGGGTTGGTGCC-TGTAGAATGCAATCCAAGGAATTTAGATTCATTCATTTCAGATACTATTCTTTCAATTTTAGGGACTATCTTAAAAACTT-AGTTTGGTAAT-ATGTAAAACATTTAAA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204144496 312 + 204313951 TGCCCGGAATTGACTCTCCTGAACCTGTGGAGCGTG-GGCTGGTGAAAGAACGCACCAACACCCACAG-TGAGCACGGGCCC-AGCTGCCCAT-GAGGGACCCGGCTCCCAGACGCCCTGTGCCACCT--CCTCTTTCCTGTCTCACCTCCCA-TTCTCTTCAG-----CTGCTGCTCAGGGCCACCTTCCAAATTTTGGTCTCAGGGCTGATGCCTTGTAGAATGCAATGCAAGGCCATTAGATTCATTTATTTCAGATTCCATTTTTTCAATTTTAGAGACTACCTTAAAAACTT-AGTTTGGTAGT-AAGTAAAACATTTACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16286777 305 + 16417988 TGCCCGGAATTGACTCTCCTGAACCTGTGGAGCGTG-GGCTGGTGGAAGAATGCACCAACACCCACAG-TGAGCACGGGCCC-TGCTGCCCAC-GAGGGACCCGGCTCCCGGAC-------GCCGCCG--CCTCTTTCCTGCCGCACCTCCCA-TTCTCTTCAG-----CTGCTGCTCAGGGCCACCTTCCAAATTGCGGTCTCAGGACTGATGCCTTGCAGAATGCAATCCAAGGcaattagattcattcatttcagattctattttttcaattttagggactatcttaaaaactt-agtttggtgat-aagtaaaacatttaca i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 72448 312 - 306014 TGCCCGGAATTGACTCTCCTGAACCCGTGGAGCACG-GGCTGGTGAAAGAATGCACCAACACCCACAG-TGAGCACGGGCCC-CGCTGCCCAT-GAGGAACCCGGCTCCCGGATGCCCCGTGCTGCCG--CCTCTTTCCTGTCTCACCTCCCA-TTCCCTTCAG-----CTGCTGCTCAGGGCCACCTTCCACATTTTGGTCTCAGGGCTGATGCCTTGTAGAATACAATCCAAGGCAATTAGATTCATTCATTTCAGATTCTATTTTTTCAATTTGAGGGACTATCTTAAAAACTT-AGTTTGGTGAT-AAGTAAAACATTTACA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 117903 290 - 211231 TGCCCGGAATTGACTCTCCTGAACCTGTGGAGGGTG-GGCTGGTGAAAGAATGCACCAACACCCACAG-TGAGCACGGGCCC-AGCTGCCCAT-GAGGGACCCGG----GAGCCGCCCCGTGCTGCCT--CCTCTTTCC-------------------CTTCAG-----CTGCTGCTCAGGGCCACCTTCCAAATTTTGGTCTCAGGGCTGATGCCTTGTAGAATGCAATCCAAGGCAATTAGATGCATTCATTTCAGATTCTATTTTTTCAATTTTAGGGACTATCTTAAAAACTT-AGTTTGGTAAT-AAGTAAAACATTTACA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2106350 303 - 2165740 GGCCTGGAATCGACAGCT---GACTTGTGAAATGTGCACCTAGTGAAGAAAAGGACCAGCTCCCACAGATAAGCATGAACCCAAGCTGCCCACAGAGGGAACTGGCTCCCCAATACGCCCTGGTTCCTGCCCCCTTGTCTGTCTGACCT-CCATTTCCTTTCAG----------------GATCACCTTCCAAATTAGTCTGTCAGGGCCAGTGTC-CATAGAATTCAATCCAAGGGAATTGGCTTCATTTATTTCAGATTATATT-TTTCAATTTTAGAGATTGTTTTAAAAATTTCAGATTAGTAAT-GTGTAAAACATATACA i otoGar3.GL873745 C 0 I 176 e mm10.chr13 74319377 2341 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11934261 1339 + 42124431 I a score=1502920.000000 s hg38.chr3_KI270934v1_alt 103524 257 + 163458 a-tttcaaagtccaga-tattacttcagagtctatttcg-gtctcactt--ccaccactgacccctGTCCTCCACAGCAACCACTTTAGATTTTTATCTTTGTACTGTTTTAAGAAA-----AAGCAAATATATATTTGCATTATATTATATGTACTCTGCCCCTTATCA---ATAGGCGttcctcattcctccttctggtacggagttccccactgcacgaattaatgttcctaatccct-tactgatggacattttgattgtttccagt s panTro5.chr3 2573576 256 - 202621043 a-tttcaaagtccaga-tattacttcagagtctatttcg-gtctcactt--ccaccactgacccctGTCCTCCACAGCAACCACTTTAGATTTTTATCTTTGTACTGTTTTAAGAAA-----AAGC-AATATATATTTGCATCATATGATATGCACTCTGCCCCTTATCA---ATAGGCGttcctcattcctccttctggtacggagttccccactgcacgaattaatgttcctaatcccc-tactgatggatattttgattgtttccagt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 161697 258 - 190779 a-tttcaaagtccaga-tattacttcagagtctatttcg-gtctcactt--ccaccactgacccctgtcctccacagcaaccactttagatttttatctttgtactgttttaagaaa-----aagcaaatatatatttgtatcatatGATATGTACTCTGCCCCTTATCA---ATaggccttcctcattcctccttctggtactgagttccccactgcatgaattaatgttcctaatccccttactgatggacattttgattgtttccagt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 9706 257 - 41186 a-tttcaaagtccaga-tattacttcagagtctatttcg-gtctcactt--ccaccactgacccctgtcctccacagcaaccactttagatttttatctttgtactgttttaagaaa-----aagcaaatatatatttgcatcatatgatatgtactctgccccttatca---ataggccttcctcattcctccttctggtacggagttccccactgcacgaattaatgttcctaatcccc-taatgatggacattttgattgtttccagt i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2885055 256 - 123690457 a-tttcaaagtccaga-tattacttcagagtctatttcg-gtctcactt--ccaccactgacccctgtcctccacagcaaccactttagttttttatctttgtactgttttaagaaa-----aagcaaatatatatttgcattatattatatgcactctg-cccttatca---ataggcattcctcattcctctttctggtactgagttctccactgtacgaattaatgttcctaatcccc-tactgatggacattttgattgtttccagt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179823178 255 - 180051392 A-TTTCAAGGTCCAGG-TATTACTTCAGAGTCTATTTCA-GTCTCACTT--CCACCACTGACCC--GTCCTCCACAGCAACCACTTTAGTTTTCCATCTTTGTACTGTTTTAAGAAA-----AAGCAAATACATATCTGCATTATATTATATGTACTCTGCTCCTTATCA---ATaggccttcctcatacctccttctggtactgagttccccactgtacaaattaatgttcctaatcccc-tactgatggacattttgattgtttccggt i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 48986 257 + 100774 A-TTTCAAGGTCCAGG-TATTACTTCAGAGTCTATTTCA-GTCTCACTT--CCTCCACTGACCCCTGTCCTCCACAGCAACCACTTTAGTTTTCCATCTTTGTACTGTTTTAAGAAA-----AAGCAAATACATATTTGCATTATATTATATGTACTCTGCTCCTTATCA---ATaggccttcctcattcctccttctggtactgagttccccactgtacaaattaatgttcctaatcccc-tactgatggacattttgattgtttccggt i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 7559 257 - 218577 a-tttcaaggtccagg-tattacttcagagtctatttcg-gtctcactt--ccaccactgacccctgtcctccacagcaaccactttagtttttcatctttgtactgttttaagaaa-----aagcaaatacagatttgcattatattatatGTACTCTGCCCCTTATCA---ATaggccttcctcattcctccttctggtactgagttccccactgtacaaattaatgttcctaatcccc-tactgatggacattttgattgtttccggt i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 36609 257 + 74206 A-TTTCAAGGTCCAGG-TATTACTTCAGAGTCTATTTTG-GTCTCACTT--CCACCACTGACCCCTGTCCTCCACAGCAACCACTTTAGTTTTTCATCTTTGTACTGTTTTAAGAAA-----AAGCAAATACAGATTTGCATTATATTATATGTACTCTGCCCCTTATCA---ATaggccttcctcattcctccttctggtactgagttccccactgtataaattaatgttcctaatcccc-tactgatggacattttgattgtttccggt i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204144808 246 + 204313951 A-TTTCAAAGTCCAAAGTATTACTTCAGAATCGATTTCA-GTTTTTCTT---CACCACAGACCCC-ATCCCCTACAGCAACCACACTA-------ATCTTTCTGCTGTTTTAAGAAA-----AAGCAAATATATATTTGCATTATATCATAGGTACTCTGCCCCTCCTC------aggccttcctcattccttcttcctgtactgagttactcactgtgggagttaatgttcctaatcccc-gactgacggacgtttgtattgtttccagt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16287082 253 + 16417988 a-tttcaaagtccaaagtattacttcagaatctatttca-gttttttttttccaccactgacccctatcccctacagcaaccacgtta-------atctttctgctgttttaagaaa-----aagcaagtatctatttgcattttatCACATGTACTCTGCCCCTCATCA---GTaggccttcctcattccttcttcctgtactgagttactcactgtgggaattaatgttcctaatcccc-gactgatggacgtttgtattgtttccagt i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 72760 256 - 306014 A-CTTCAAAGTCCAAAGTATTACTTCAGAATCTATTTCA-GTTTTTTTT-CCCACCACTGACCGCTATCCCCTACAGCAACCACGTTAG---TTTATCTTTCTGCTGTTTTAAGAAA-----AAGCAAATATCTATTTGCATTATCTCACATGTACTCTGCCCCTCATCA---GTaggccttcctcattccttcttcctgtactgagttactcactgtgggaattaatgttcctaatcccc-gactgatggacgtttgtattgtttccagt i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 118193 233 - 211231 ATTTTTAAAGTCCAAAGTATTACTTCAGAATGTATTTCA-GGTTTTTTT-TCCACCACTGACCCCTATCCCCTACAGCAACCACGTTCG---TTTATCTTTCTGCTG----------------------------CTTGCATTATATCATAAGTACTCTGCCCCTCATCA---Ggaggccttcctcattccttcttcccgta-tgagttactcactgtgggaattaatgttcctagtcccc-gactgatggacgtctgtaccgtttccagt i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2106829 249 - 2165740 A-ATTCACAATCTAGTGCATTACCTCGGAGTGTATTTAGAGGCTCACTG--GCGCCACTGTCCCCTGTTCTCCATAGCAACCACTTTAGTGTTTTTTCTTTCTAGAGTTTTAGGAGAAAAGGAAGCACTTCTGTCTTTGACTTTGATCACTTCTG-TCTGCAACTGACCATTCACAGGTCCTCCTCAATTCTCC---------------CCTAACTGCATGAACAAAGGTGCCTCATCCAC-AACTGACAGATGTTTTTA--GTTTCCAAT i otoGar3.GL873745 I 176 C 0 e mm10.chr13 74319377 2341 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11934261 1339 + 42124431 I a score=2510827.000000 s hg38.chr3_KI270934v1_alt 103781 297 + 163458 ttta----------caaatgccacagtgaagaactttgtggcaaacacattcaggctgtgaaaagaactctgtggataaagtcctttcatttctttgccagagttttttttgaggcagatt-ctagaattgctgagtctaagggcaaatgc-catgtc--gttttgttagatgctgccaaatcctcttccatgaggctgcaacgttctgcattccacagtgacgtatgagagtccttgtaccccacagcttcataaacaaagcatgacagcaaacctgc--acgtttacccatcacacagttgagaaatttta s panTro5.chr3 2573832 297 - 202621043 ttta----------caaacgccacagtgaataactttgtggcaaacacattcaggctgtgaaaagaactctgtgggtaaagtcctttcatttctttgccagagttttttttgaggcagatt-ctagaattgctgagtctaagggcaaatgc-catgta--gttttgttagatgctgccaaatcctcttccatgaggctgcaacgttctgcattccgcagtgacgtatgagagtccttgtaccccacagcttcataaccaaagcatgacagccaacctgc--acgtttacccatcacacagttgagaaatttta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 161955 295 - 190779 ttta----------caaacgccacagtgaagaactttgttgcaaacacattcaggctgtgaaaagaactctgtgggtaaagtcctttcatttctttgccagagttttttttgaggcagatt-ctagaattgctgagtctaagggcaaatgc-catgta--gttttgttagatgctgccaaatcctcttccatgaggctgcaacgttctgcattccacagtgacgtat--gagtccttgtaccccacagcttcataaccaaagcatgacagcaaacctgc--acgtttacccatcacacagttgagaaatttta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 9963 297 - 41186 ttta----------caaacgccacagtgaagaactttgttgcaaacacattcaggttgtgaaaagaactctgtgtgtaaagtcctttcatttctttgccagagttttttttgaggcagatt-ctagaattgctgagtctaagggcaaatgc-catgta--gttttgtcagatgctgccaaatcctcttccatgaggctgcaacgttctgcattccgcagtgacgtatgagagtccttgtaccccacagcttcataaacaaagcatgacagcaaacctgc--acgtttacccatcacacagttgagaaatttta i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2885311 296 - 123690457 ttta----------caaatgccacagttaagaactttgttgcaaacacattcaggctgtgaaaagaactctgtgcgtaaagtcctttcatttctttgccagag-tttttttgaggaagatt-ctagaattgctgagtcaaagggcaaatgc-catgta--gttttgttagatgctgccaaatcctcttccatgaggctgcaacgttctgcattccacagtgacgtatgagagtccttgtaccacacagcttcataaacaaagcatgacagcaaacctac--acgtttacccatcatacagttgagaaatttta i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179823433 294 - 180051392 ttta----------caaatgccacagtgaagaacttggttgcaaacacattcaggctgtcaaaagaactctgtgcataaagtcctttcatttcttttcc--ag-tttttttgatgcagatt-ccagaattgctgactcaaagggcaaatgc-tacata--ctttcgttagacgctgccaaatcctcttccacgaggctgcaacgttctgcattccacagtgaggtatgagagtccttgtaccccacagcttcataaacaaagcatgatggcaaacctgc--acgtttactaatcacacaggtaagaaatttca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1286936 296 + 181584905 TTTA----------CAAACGCCACAGTGAAGAAGTTTGTTGTAAACACATTCAGACTGTGAAaagaactctgtgcgtaaagtcctttcatttctttgccagag-tttttttgaggcagatt-ctagaattgctgagtcaaacggcaaatgc-cacata--gttttgttagatgctgccaaatcctcttccacgaggctgcaacgttctgcattccacagtgaggtatgagagtccttgtaccccacagcttcataaacaaagcatgatggcaaacctgc--acgtttaccaatcacacaggtaagaaatttca i macFas5.chr6 N 0 C 0 s macNem1.NW_012013899v1 49243 294 + 100774 ttta----------caaatgccacagtgaagaacttggttgcaaacacattcaggctgtcaaaagaactctgtgcgtaaagtcctttcatttcttttcc--ag-tttttttgatgcagatt-ccagaattgctgagtcaaagggcaaatgc-tacata--ctttcgttagacgctgccaaatcctcttccacgaggctgcagcgttctgcattccacagtgaggtatgagagtccttgtaccccacagcttcataaacaaagcatgatggcaaacctgc--acggttaccaatcacacaggtaagaaatttca i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 7816 294 - 218577 ttta----------caaatgccacagtgaagaacttggttgcaaacacattcaggctgtcaaaagaactctgtgcataaagtcctttcatttcttttcc--ag-tttttttgatgcagatt-ccagaattgctgagtcaaacggcaaatgc-tacata--ctttcgttagacgcagccaaatcctcttccacgaggctgcaacgttctgcattccacagtgaggtgtgagagtccttgtaccccacagcttcacaaacaaagcatgacggcaaacctgc--acgtttaccaatcacacaggtaagaaatttca i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1381046 296 + 91010382 TTTA----------CAAATGCCACAGTGAAGAGCTTTGTTGTAAACACATTCAGgctgtgaaaagaactctgtgcgtaaagtcctttcatttctttgccagag-tttttttgaggcagatt-ctagaattgctgagtcaaagggcaaatgc-cacata--ctttcgttagacgctgccaaatcctcttccacgaggctgcaacgttctgcattccacagtgacgtacgagaatccttgtaccccacagcttcataaacaaaacatgatggcaaacctgc--acgtttaccaatcacacaggtaagaaatttca i chlSab2.chr4 N 0 C 0 s manLeu1.NW_012101728v1 36866 294 + 74206 ttta----------caaatgccacagtgaagaacttggttgcaaacacattcaggctgtcaaaagaactctgtgcataaagtcctttcatttcttttcc--ag-tttttttgaggcagatt-ccagaattgctgagtcaaacggcaaatgc-cacata--ctttcgttagacgctgccaaatcctcttccacgaggctgcaccgttctgcattccacagtgaggtgtgagagtccttgtaccccacagcttcacaaacaaagcatgacggcaaacctgc--acgtttaccaatcacacaggtaagacatttca i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 782125 297 - 1687011 TTTA----------CAAATGCCACAGTGAAGAACTTTGTTGTAAACACATTCAGgctgtgaaaagaactctgtgcataaaatcctttcatttctttgccagag-tttttttgaggcagatt-ctagaattgctgagtcaaagggcaaatgc-cacatagttttttgttagacgctgccaaatcctcttccacgaggctgcgacgttctgcgttccacagtgacgtatgagagtccttgta-cccacagcttcataaacaaagcatgatggcaaacctgc--acgtttaccaatcacacaggtgagaaatttca i colAng1.NW_012116910v1 N 0 C 0 s calJac3.chr2 204145054 282 + 204313951 attattccggttcttcaatgccacggtgaagaactttgt--cagacacactcaggccgtg-agaagg----------------ctttcatttctccgccagag-tgtcttagagacagatccctagaattgttaagtcaaagagcaaatgc-catgca--g--ctgtcagatgctgacaaatcctcttccctgaggccgcagcattctgcactccacaccggtgt----gagtccttgtaccctacatcttcacaaacgaagcctgacagcaaacctgc--ctgtttaccagtcacacgggtgagacacttta i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16287335 274 + 16417988 atta----------caaatgccacggtgaagaactgttttacaaacatactcaggctgtgaagagaa----------------ctttcatttctctgccagag-tgttttagagacagattcctagaattgctaagtcaaagggtaaatgc-catgca--g--tttttagatgctg-caaatcctcttccacgaggctgcagcattctgcactccacagtgatgc----gagtccttgtaccctacagcttcataaacgaagcatgacagcaaacctgc--ctgtttaccagtcacacagctgaggcatttta i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 73016 277 - 306014 gtta----------caaatgccacggtgaagaactttgttacaaacacactcaggctgtgaagagaa----------------ctttcatttctctgccagag-tgttttggagacagattcctagaattgctaagtcaaatggcaaatgc-catgca--gttttgttagacgctgccaaatcctcttccatgaggctgcagcattctgcactccacagtcacgt----gagtccttggaccccacagcttcataaacgaagcatggcagcaaacctgc--ctgtttaccagtcacacagctgacacatttta i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 118426 261 - 211231 atta----------caaatgccacggtgaagaactgtgttacagacacactcaggctgtgaagagaa----------------ctttcctttctctgccagag-tgttttagagac--attcctagaattgctaagtc--agggcagatgc-catgca--gttttgttagacgctgccaaatgctcctccgtgaggctgca-----------ctcacagtgacgt----gagtccttgtaccc-acagcttcataaatgaagcgtgacagcagccctgc--ctgtttaccagtcacacaggtgagacgtttta i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2107078 213 - 2165740 ATTG----------CAAATTACACAATGAATAA-----------------------------------------------------------------------TTT-------Gtagattcctataactgctggcccaaatggtaattgcatgtgta--gttttgttagatggtgccaaatcctcttcggtggaggtataacattctgtgttcca-----acacatgggagtctctgtatccaacagttcctgaaat----cctgatggtaaactttcagatgttaacccctcatagagatgaga-acttta i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11934261 1339 + 42124431 I a score=2664099.000000 s hg38.chr3_KI270934v1_alt 104078 290 + 163458 t-ctACTTTCACC-TTTTTTTTTGGTTAGCATTTTTATTCCCA--------GC--T-TTTTTGTGGTATAATGCGCAGAAGGTAATGAACACATT--CTAC---CTGCaagcttcttcctgtgcctttggaa----tctgctcctgcc------agtctgcaggg-aaccacggatctgctttccg----tcacg---tagg----aggcattctcgacaccctctgt----------aca--cag---catgcgc----tttatttggcttctcttacgcagc---------gtagtgac--tttcagatttattcaagctgctgcgtgcgccaacagtccactccttcctagtgctga s panTro5.chr3 2574129 289 - 202621043 t-ctactttcacc--ttttttttggttagcatttttATTCCCA--------GC--T-TTTCTGTGGTGTAATGTGCAGAAGGTAATGAACACATT--CTAC---CTGCaagcttcttcctgtgcctttggaa----tctgctcctgcc------agtctgcaggg-aaccacggatctgctttccg----tcacg---tagg----acacattctcgacaccctctgt----------aca--cag---catgcgc----tttatttggcttctcttacgcagc---------gtagtgac--tttcagatttattcaagctgctgcgtgcgccaacagtccactccttcctagtgctga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 162250 289 - 190779 t-ctACTTTCACC--TTTTTTTTGGTTAGCATTTTTATTCCCA--------GC--T-TTTTTGTGGTGTAATGTGCAGAAGGTAATGAACGCATT--CTAC---CTGCaagcttcttcctgtgcctttggaa----tctgctcctgcc------agtctgcaggg-aaccacggatctgctttccg----tcacg---tagg----acacattctcgacaccctctgt----------aca--cag---catgcgc----tttatttggcttctcttacgcagc---------gtagtgac--tttcagatttattcaagctgctgcatgcgccaatagtccaccccttcctagtgctga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 10260 291 - 41186 t-ctACTTTCACCTTTTTTTTTTGGTTAGCATTTTTATTCCCA--------GC--T-TTTTTGTGGTGTAATGTCCGGAAGGTAATGAACACATT--CTAC---CTGCaagcttcttcctgtgcctttggaa----tctgctcctgcc------agtctgcaggg-aaccacagatctgctttccg----tcacg---tagg----aggcattctcgacaccctctgt----------aca--cag---catgcgc----tttatttggcttctcttacgcagc---------gtagtgac--tttcagatttattcaagctgctgcgtgcgccaatagtccactccttcctagtgctga i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2885607 295 - 123690457 tcctggtttcacc-ttgttttttggttagcattttaattacca--------gC--T-TTTTTGTGGTGGAATGCACAGAAGGTAATGAACACATT--CTAC---CTGCAAGCTTCTTCCTGTGCCTTTGGAA----TCTGCTCTTGCC------AGTCTGCAAGG-AAGCATGGatctgctttctg----tcacg---cagg----aggcattctcgacaccctctat----------aca--cag---catgcgcttt-tttatttggcttctcttacgcagc---------gtggtgactgtttcagatttattcaagctgctgcgtgtgccaatagtccactcctt-ctagtgctga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179823727 295 - 180051392 tcctagtttcacc-tttttttttggttagcatttttattacca--------gcTTT-TTTTTTTGGTGTAATGCACAGAAGGTAATGAACACATT--CTAC---CTGCAAGCTTCTTCCTGTGCCTTTGGAA----TCTGCTCCTGCC------AGTCTGCAGGA--ACCACGGATCTGCTTTCCG----TCACA---CAGG----AGGCATTCTCGACACCCTCTGT----------aca--cag---catgcacttt-tttatttggcttctcttacgcagc---------atagtgac--tttcagatttattcaagctgctgcatgtgccaacagtccactccttcctagtgctga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1287232 293 + 181584905 tcctagtttcacc-tttttttttggttagcatttttattaCCA--------GC--T-TTTTTTTGGTGTAATGCACAGAAGGTAATGAACACATT--CTAC---CTGCAAGCTTCTTCCTGTGCCTTTGGAA----TCTGCTCCTGcc------agtctgcagga--accacggatctgctttctg----tcaca---cagg----aggcattctcgacaccctctgt----------aca--cag---catgcacttt-tttatttggcttctcttacgcagc---------atagtgac--tttcagatttattcaagctgctgcatgtgccaacagtccactccttcctagtgctga i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 49537 293 + 100774 tcctagtgtcacc-tttttttttggttcgcatttttattacca--------gc--T-TTTTTTTGGTGTAATGCACAGaaggtaatgaacacatt--ctac---ctgcaagcttcttcctgtgcctttggaa----tctgctcctgcc------agtctgcagga--gccacggatctgctttccg----tcaca---cagg----aggcattctcgacaccctctgt----------aca--cag---cacgcacttt-tttatttggcttctcttacgcagc---------atagtgac--tttcagatttattcaagctgctgcatgtgccaacagtccactccttcctagtgctga i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 8110 291 - 218577 tcctagtttcacc---aatttttggttagcatttttattacca--------gc--T-TTTTTTTGGTGTAATGCACAGAAGGTGATGAACACATT--CTAC---CTGCAAGCTTCTTCCTGTGCCTTTGGAA----TCTGCTCCTGCC------AGTCTGCAGGG--ACCACGGATCTGCTTTCCG----TCACA---CAGG----AGGCATTCTCGACACCCTCTGT----------aca--cag---cgtgcacttt-tttatttggcttctcttacgcagc---------atagtgac--tttcagatttattcaagctgctgcatgtgccaacagtccactccttcctagtgctga i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1381342 305 + 91010382 tcctagtttcacc--ttttttttggttagcatttttattaCCA--------GC--T-TTTTTTTGGTGTAATGCACAGAAGGTAATGAACACATT--CTACCTGCTGCAAGCTTCTTCCTGTGCCTTAAGAA----TCTGCTCCTGcc------agtctgcaggg-aaccacagatctgccttccg----tcaca---cagg----aggcattctcgacaccctctgt----------aca--cag---catgcacttt-tttatttggcttctcttacgcagcatagtgactatagtgac--tttcagatttattcaagctgctgcatgtgccaacagtccactccttcctagtgctga i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 37160 293 + 74206 tcctagtttcacc-tttttttttggttagcatttttattacca--------gc--T-TTTTTTTGGTGTAATGCACAGAAGGTGATGAACACATT--CTAC---CTGCaagcttcttcctgtgcctttggaa----tctgctcctgcc------agtctgcaggg--accacggatctgctttccg----tcaca---cagg----aggcattctcgacaccctctgt----------aca--cag---cgtgcacttt-tttatttggcttctcttacgcagc---------atagtgac--tttcagatttattcaagctgctgcatgtgccaacagtccactccttcctagtgctga i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 782422 292 - 1687011 tcctagtttcacc--ttttttttggttagcatttttattacca--------gc--T-TTTTTGTGGTGTAATGCACAGAAGGTCATGAACACATT--CTAC---CTGCaagcttcttcctgtgcctttggaa----tctgctcctgcc------agtctgcaggg-aaccacggatctgctttccc----tcaca---tagg-----ggcattctcgacaccctctgt----------aca--cag---catgcacttt-tttatttggcttctcttacgcagc---------atagtgac--tttcagatttattcaagctgctgcatgtgccaacagtccactctttcctagtgctga i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204145336 275 + 204313951 tcctagtttcgccttttttctttggttagcatttttattaCCA--------GC--TCTTTTTGTGGTATAATGTGCAGAAGGGATTGAACACATT--CTAC---CCGCAAGCTTCTTCCTGTGCCTTTGGAA----TCTGCTCCTGCC------ACTCTGCAGGG-AACCGTG-----------------------------------------TCGACA--CTGTGCACGtggagtcaca--cag---cctatactctttttatttggcttctctaactcagt---------gtagtgac--tttcagattgatccaagctgctgtgtgtgccaatagtgcattccttcccagtgctga i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16287609 306 + 16417988 tcctagtTTCGCCTTTTTTCTTTGGTTAGCATGTTTATTACCA--------GC--TCTTTTTGTGGTGTCATGTGCAGAAGGGACTGAACACATT--CTAc---ccacaagcttcttcctgtgcctttggaa----tctgctcctgcc------agtctgcaggg-aaccatg-atctgctttcca-----tatg---caggcaagaagca-tctcgacactctctgtatgtggagtcaca--cag---cccgtgctc--ttcaattgccttctctaactcagt---------gtagtgac--tttcagatcgatccaagctgctgtgtgtgccaacggtgcattccttcccagggctga i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 73293 306 - 306014 tcctggtttggcctttttcctttggttagcatttttactatca--------gc--TCTTTTTGTGGTGTAATGTGCAGAAGGGATTGAACACATT--CTAc---ccgcaagcttcttcctgtgcctttggaa----tctgctcccgcc------agtctgcaggg-aaccatg-atctgctttcca----ttacg---caggcaggaagca-tctctacacgctctgcacgtggactcaca--cag---cccgcgct---tttatttggcatctctaactcagt---------gtagtgac--tttcagattgatccaagctgctgtgtgtgccaacagtgcattccttcccagtgctga i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 118687 309 - 211231 tcctagtttcgccttttttctttggttagcatttttattacca--------gc--TCTTTTTGTGGCGTAACGTGCAGAAGGGATTGAACACGTT--CCAC---CCGCAAGCTGCTTCCTGTGCCTCCGGAA----TCTGCTCCTGCC------AGTCTGCAGGG-AACCACG-GTCGGCTTTCCA----TTACG---CAGGCGGGAGGCA-tctcgacactctctgtacgtggaatcaca--cga---cccgcactctttttatctggcttctctaactcagt---------gtagtgac--tttcagattgatccaagctgctgtgtgtgccagcagtgcattccttcccagtgctga i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2107291 293 - 2165740 tcttagAATCCCT-----TTTTTGGTTAGCATTTTTA--ACCAAAAACTATAC--TCTTCTTAAGGTGTAATTAGCAGAAGATAATAAACATACT--CTAc---ctacaagtttccttc-gcccctttataatttctccacccctcca------agtttacaagcaaaccactgatctgccctccaggctttaca---taaa----tggaatc-------------------------aca--caggcacatcctcttt-tttatttaggttctcttacttagc---------agaatgat--tatgagattcattcaagctgccccatgtaccaacaactcattccttgttatggcaga i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74321718 294 + 120421639 -tctctttcctcc-tcttcttcctcctcttccttctTTTTTAA--------GT--T----TTGAGGTATAATTAGCAGAAAATAACAAACATAATTATCAC---ATAAAGCTTTCCTCCTA-ATCTTAGGGA----CCTCTTCCTCCTTTTCCAAATCTGCATAG-AGCTActgatcttctgt-ta----ttacatgtcagt----tagcagtttctagacttcaagt----------gcaatcag---tgtgtacctt-cttgact------tcttacccttg---------tcaatagc--attgagattcatccatgctgctgtgtataccaa-agcccgtccttttctagtagtga i mm10.chr13 I 2341 I 696 e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11934261 1339 + 42124431 I a score=155564.000000 s hg38.chr3_KI270934v1_alt 104368 23 + 163458 gG---CCCCCATCACATGAGCACAAC-------- s panTro5.chr3 2574418 23 - 202621043 gG---CCCCCATCACATGAGCACAAC-------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 162539 23 - 190779 gG---CCCCCATCACATGAGCACAAC-------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 10551 23 - 41186 gG---CCCCCATCACAAGAGCACAAC-------- i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2885902 23 - 123690457 gG---CCCCCATCACATGAGCACAAC-------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179824022 22 - 180051392 gG----CCCCATCACATAAGCACAAC-------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1287525 22 + 181584905 gG----CCCCATCACATAAGCACAAC-------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 49830 22 + 100774 gG----CCCCATCACATAAGCACAAC-------- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 8401 22 - 218577 gG----CCCCATCACATAAGCACAAC-------- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1381647 22 + 91010382 gG----CCCCATCACATAAGCACAAC-------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 37453 22 + 74206 gG----CCCCATCACATAAGCACAAC-------- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 782714 22 - 1687011 gG----CCCCATCACATAAGCACAAC-------- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204145611 25 + 204313951 ggag-tgcccatcacgtgggcacagc-------- i calJac3.chr2 C 0 I 5 s saiBol1.JH378155 16287915 25 + 16417988 ggag-tgcccatcacatgggcgcagc-------- i saiBol1.JH378155 C 0 I 5 s cebCap1.NW_016108150v1 73599 25 - 306014 cgag-tgcccatcacatgggcgcagc-------- i cebCap1.NW_016108150v1 C 0 I 5 s aotNan1.NW_018494784v1 118996 25 - 211231 ggag-tgcccatcacatgggcacggc-------- i aotNan1.NW_018494784v1 C 0 I 34 s otoGar3.GL873745 2107584 34 - 2165740 gaagcattctgttatatgTGCACAATGCAGCCAT i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11934261 1339 + 42124431 I a score=192645.000000 s hg38.chr3_KI270934v1_alt 104391 29 + 163458 TGTTTCTTG---TGTGTGATGTGTTGTCCTCT s panTro5.chr3 2574441 29 - 202621043 TGTTTCTTG---TGTGTGATGTGTTGTTCTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 162562 29 - 190779 TGTTTCCTG---TGTGTGATGTGTTGTTCTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 10574 29 - 41186 TGTTTCCTG---TGTGTGATGTGTTGTTCTCT i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2885925 29 - 123690457 TGTTTCCTG---TGTGTGATGTGTTGTTCTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179824044 29 - 180051392 TATTTCCTG---TGTGTGATGTGTTATTCTCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1287547 29 + 181584905 TGTTTCCTC---TGCGTGATGTGTTGTTCTCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 49852 29 + 100774 TGTTTCCTC---TGCGTGATGTGTTATTCTCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 8423 29 - 218577 TGTTTCCTC---TGCGTGATGTGTTATTCTCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1381669 29 + 91010382 TGTTTCCTC---TGCGTGATGTGTTGTTCTCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 37475 29 + 74206 TGTTTCCTC---TGCGTGATGTGTTATTCTCT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 782736 29 - 1687011 CGTTTCCTC---TGCGTGATGTGTTGTTCTCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204145641 29 + 204313951 --tttcctgtcttctgtggtgaggggTTCTC- i calJac3.chr2 I 5 C 0 s saiBol1.JH378155 16287945 29 + 16417988 --ttTCCTGTCTTCTGTGGTGTGGGGTTCTC- i saiBol1.JH378155 I 5 C 0 s cebCap1.NW_016108150v1 73629 29 - 306014 --ttTCCTGTCTTCTGTGGTGTGGGGTTCTC- i cebCap1.NW_016108150v1 I 5 C 0 s otoGar3.GL873745 2107618 29 - 2165740 TGTTTCCTG---TACGTAATATACCAGCCACT i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 119021 34 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11934261 1339 + 42124431 I a score=400434.000000 s hg38.chr3_KI270934v1_alt 104420 52 + 163458 GGCTGTGCACTG--CCAAAAAAGACATCATT-------------AAA----AAAAATTTAAATATAATGTA s panTro5.chr3 2574470 52 - 202621043 GGCTGTGCACTG--CCAAAAAAGACATCATT-------------AAA----AAAAATTTAAATATAATGTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 162591 51 - 190779 GGCTGTGCACTG--CCAAAAAAGACATCATT--------------AA----AAAAATTTAAATATAATGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 10603 54 - 41186 GGCTGTGCACTG--CCAAAAAAGACATCATT-----------AAAAA----AAAAATCTAAATATAATGTA i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2885954 55 - 123690457 GGCTGTGCACTG--CCAAAAAAGACATCATT----------TAAAAA----AAAAATCTAAATATAATGTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179824073 58 - 180051392 GGCTGTACACTG--CCAAAAAAGACATCATT-------AAAAAAAAA----AAAAATCTAAATATAATGTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1287576 53 + 181584905 AGCTGTGCACTG--CCAAAAAAGATATCATT------------AAAA----AAAAATCTAAATATAATGTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 49881 53 + 100774 GGCTGTGCACTG--CCAAAAAAGATATCATT------------AAAA----AAAAATCTAAATATAATGTA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 8452 60 - 218577 GGCTGTACATTGGTGTACAAAAGACATCATT-------AAAAAAAAA----AAAAATCTAAATATAATGTA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1381698 56 + 91010382 AGCTGTGCACTG--CCAAAAAAGATATCATT---------AAAAAAA----AAAAATCTAAATATAATGTA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 37504 58 + 74206 GGCTGTACATTGGTGTACAAAAGATATCATT---------AAAAAAA----AAAAATCTAAATATAATGTA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 782765 59 - 1687011 GGCTGTATACTG--CCGAAAAAGACATCATTT------AAAAAAAAA----AAAAATCTAAATATAATGTA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204145670 65 + 204313951 AGCTGTGCACTG--CGAAAAAAGACTTCATTC----AAAACACACACAAAAAAAGAGCTAAATATAATGTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16287974 61 + 16417988 AGCTGTGCACTG--CCAAAAAAGACATCATTC----AAAACACACAC----AAAGAGCTACGTCTAACGTA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 73658 61 - 306014 AGCTGTGCACTG--CCAAAAAAGACATTATTC----AAAACACACAA----AAAGAGCTATGTATAATGTA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 119055 61 - 211231 AGCTGTGCACTG--CCAAGAAAGACATCATCC----AAAACACAAAA----AAAGAGCTACATATAATGTA i aotNan1.NW_018494784v1 I 34 C 0 s otoGar3.GL873745 2107647 59 - 2165740 ------CAACTG--CCAACAAAGACATTAAATTATTCAAAAGGGGGG----GGCAACCTAAATATAATATA i otoGar3.GL873745 C 0 I 488 e mm10.chr13 74322012 696 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11934261 1339 + 42124431 I a score=1335465.000000 s hg38.chr3_KI270934v1_alt 104472 141 + 163458 AGACCTGCCTTGTCTTAGGAAACGTTTTTCTGgcagtggctcacacctataatcccaatactctgggaggctgaggcaggaggactgcttgagcccaggagtttgggaccag-------------------------------cctgggcaagagggtgaaaccctgtctct s panTro5.chr3 2574522 141 - 202621043 AGACCTGCCTTGTCTTAGGAAACGTTTTTCTGgcagtggctcacacctataatcccaatactctggcaggctgaggcaggaggactgcttgagcccaagagtttgggaccag-------------------------------cctgggcaagatggtgaaaccctgtctct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 162642 141 - 190779 AGACCTGCCTTGTCTTAGGAAACGTTTTTCTGgcagtggctcacacctataatcccaatactctgggaggctgaggcaggaggactgcttgagcccaggagtttgggaccag-------------------------------cctggacaagattgtgaaaccctgcctct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 10657 141 - 41186 AACCCTGCCTTGTCTTAGGAAAAGTTTTTCTGgcagtggctcacacctatactcccaatactctgggaggctgaggcaggaggactgcttgagcccaggagtttgggatcag-------------------------------cctgggcaagatggtgaaaccctgtctct i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2886009 140 - 123690457 AAACCTGCCTTGCCTTAGGAAAAGTTTTTCTGgcagtggctcacacctataatcccaatactctgggaggctgaggcaggaggactgcttgagcccaggag-ttgagaccag-------------------------------cctgggcaagatggtgaaaccctgtctct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179824131 145 - 180051392 AAACCTGCCTTGCCTTAGG-AAAGTTTTTCTGgcagcggctcacacctataatcccaatactctgggaggctgaggcaggaggactgcttgagcccaggagtttgagctcaagcagt--------------------------cctgggcgagatggtgaaaccccgtctct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1287629 140 + 181584905 AAACCTGCCTTGCCTTAGG-AAAGTTTTTCTGgcagcggctcacacctataatcccaatactctgggaggctgaggcaggaggactgcttgagcccaggagtttgagctcag-------------------------------cctgggcgagatggtgaaaccccatctct i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 49934 171 + 100774 AAACCTGCCTTGCCTTAGG-AAAGTTTTTCTGgcagcggctcacacctataatcccaatactctgggaggctgaggcaggaggactgcttgagcccaggagtttgagctcaagcagtcctgggcgagatggtgaaaccccgtccctgggtgagatggtgaaaccccatctct i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 8512 140 - 218577 AAACCTGCCTTGCCTTAGG-GAAGTTTTTCTGgcagtggctcacacccataatcccaatactctgggaggctgaggcaggaggactgcttgagcccaggagtttgagctcag-------------------------------cctgggcaagatggtgaaaccccgtctct i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1381754 140 + 91010382 AAACCTGCCTTGCCTTAGG-AAAGTTTTTCTGgcagtggctcacacctataatcccaatactctgggaggctgaggcaggaggactgcttgagcccaggaatttgagatcag-------------------------------cctgggcaagatggtgaaacccagtctct i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 37562 140 + 74206 AAACCTGCCTTGCCTTAGG-AAAGTTTTTCTGgcagtggctcacacccataatcccaatactctgggaggctgaggcaggaggactgcttgagcccaggagtttgagctcag-------------------------------cctgggcaagatggtgaaaccccgtctct i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 782824 141 - 1687011 AAACCTGCCTTGCCTCAGGAAAAGTTTTTCTGgcagtggctcacacctataatcccaatactctgggaggctgaggcaggaggacggcttgagcccgggagtttgagaccag-------------------------------cctgggcaagatggtgaaacccggtctct i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204145735 138 + 204313951 AAACCTGCCTTGTCTTAGGAAAAGGTTTTCTGgcagcggctcacacctataatcccaacactttgggaggctga---aggaggactgcttgagcccaggagtttaagaccag-------------------------------cctggtcaagatggtgaaaccccatctct i calJac3.chr2 C 0 I 11 s saiBol1.JH378155 16288035 138 + 16417988 AAACCTGCCTCGTCTTAGGAAAAGGTTTCCTGgcagtggctcacacctataagcccaacactttgggaggctga---aggaggactgcttgagcccaggactttaagaccag-------------------------------cctgggcaagatggtgaaaccccatctct i saiBol1.JH378155 C 0 I 11 s cebCap1.NW_016108150v1 73719 138 - 306014 AAACCTGACATGTCTTAGGAAAAGGTTTTCTGgcagtggctcacacctataatcccaaaactttgggacgctga---aggaggactgcttgagcccaggagtttaagaccag-------------------------------cctgggcaagatggtgaaaccccatctct i cebCap1.NW_016108150v1 C 0 I 332 s aotNan1.NW_018494784v1 119116 138 - 211231 AAACCTGCCTCATCTTAGGAGAAGGTTTTCCGgcagtggctcacacctataatcccaatactctaggaggctga---aggaggactgcttgagcccaggagtttaagaccag-------------------------------cctgggcaagatggtgaaaccccatctct i aotNan1.NW_018494784v1 C 0 I 11 e mm10.chr13 74322012 696 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2107706 488 - 2165740 I a score=1528186.000000 s hg38.chr3_KI270934v1_alt 104613 168 + 163458 aa-------------aaattagccaggcatggtggctcacacctgtagtctcagctcttagggaggctgaggtgggaggactgctggagcccaggaggtggaggctgcagtgagccgagatcacaccactgcactccagcctgggcagcatggcaagactctgtctcgaccaagaaa----aaaa s panTro5.chr3 2574663 168 - 202621043 aa-------------aaattagccaggcatggtggctcacacctgtagtctcagctcttagggaggttgaggtgggaggactgctggagcccgggaggtggaggctgcagtgagccgagatcacatcactgcactccagcctgggcagcatggcaagactctgtctctaccaagaaa----aaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 162783 167 - 190779 aa-------------aaattagccaggcatggtggctcacacctgtagtctcagctcttagggaggttgaggtgggaggactgctggagcccgggaggtggaggctgcagtgagccgagatcacatcactgcactccagcctgggcagcatggcaagactctgtctctaccaagaaa----aaa- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 10798 168 - 41186 aa-------------aaattagccaggcatggtggctcacacctgtagtctcagctcttagggaggttgaggtgggaggattgctggagcccgggaggtggaggctgcagtgagccgagatcacagcactgcactccagcctgggcagcatggcaagactctgtctctaccaagaaa----aaaa i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2886149 167 - 123690457 aa-------------aaattagccaggcatgatggctcacgcctgtagtctcagctcctagggaggttgaggtggga-gattgctggagcccgggaggtggaggctgcagtgagccgagatcacaccactgcactccagcctgggcagcatggcaagactctgtctctaccaagaaa----aaaa i nomLeu3.chr11 C 0 I 2 s rheMac8.chr6 179824276 179 - 180051392 gt--aaaaaatataaaaattagccaggcatagtggctcacacctgtagtctcagctccttgagaagctgaggtgggaggattgctggagcccgggcggtggaggttgcagtgagccgagatcacaccactgcactccagcctgggcagcatggcaagactctgtctctaccaagaaa----aaaa i rheMac8.chr6 C 0 I 1 s macFas5.chr6 1287769 180 + 181584905 gt-aaaaaaatataaaaattagccaggcatagtggctcacacctgtagtctcagctccttgggaggcggaggctggaggattgctggagcccgggaagtggaggttgtagtgagctgagatcacaccactgcactccagcctgggcagcatggcaagactctgtctctaccaagaaa----aaaa i macFas5.chr6 C 0 I 1 s macNem1.NW_012013899v1 50105 179 + 100774 gt--aaaaaatataaaaattagccaggcatagtggctcacacctgtagtctcagctccttgagaagctgaggtgggaggattgctggagcccgggcggtggaggttgcagtgagccgagatcacaccactgcactccagcctgggcagcatggcaagactctgtctctaccaagaaa----aaaa i macNem1.NW_012013899v1 C 0 I 1 s cerAty1.NW_012004452v1 8652 179 - 218577 gt--aaaaaatataaaaattagccaggcatagtggctcacacctgtagtctcagctccttgagaagctgaggcgggaggattgctggagcccgggcggtagaggttgcagtgagccaagatcacaccactgcactccagcctgggcagcatggcaagactctgtctctatcaagaaa----aaac i cerAty1.NW_012004452v1 C 0 I 1 s chlSab2.chr4 1381894 180 + 91010382 at-aaaaaaatataaaaattagccaggcatggtggctcacacctgtagtctcagctccttgggaggctgaggtgggaggattgctggagcctgggaagtggaggttgtagtgagctgagatcacaccactgcactccagcctgggcagcatgacaagactctgtctctaccaagaaa----aaac i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 37702 179 + 74206 gt--aaaaaatataaaaattagccaggcatagtggctcacacctgtagtctcagctccttgagaagctgaggcgggaggattgctggagcccgggcggtagaggttgcagtgagccaagatcacaccactgcactccagcctgggcagcatggcaagactctgtctctatcaagaaa----aaac i manLeu1.NW_012101728v1 C 0 I 1 s colAng1.NW_012116910v1 782965 180 - 1687011 ataaaaaaaatataaaaattagccaggcatggtggctcacacctgtggtctcagctccttgggaggctgaggcaggaggattgctggagcctgggaagtggaggttgtagtgagccgagatcacaccactgccctccagcctgggcag-atggcaagactctgtctctcccaagaaa----aaga i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204145884 151 + 204313951 -------------aaaaattagccaggcatggtggctcatgcctgtagtctcagctcc-------------gtgggaggactgctggagcccaggaggtggaggttgcagtgagctgagatcacagcactgctctccagcctgggcagcatggcaagaacccatctctaccaagaaa-------- i calJac3.chr2 I 11 C 0 s saiBol1.JH378155 16288184 154 + 16417988 -------------aaaaattagccaggcatg-------acgcctgtagtctcagctccttgggaggctgaggtgggaggcctgctggagcccaggaggtggaggttgccgtgagccgagatcacagcactgctctccagcatggg-agcatggca--actctgtctctaccaagaaa-------- i saiBol1.JH378155 I 11 C 0 s cebCap1.NW_016108150v1 74189 164 - 306014 -------------aaaaattagctgggcgtggtggcacacgcctgtaatctcagctactcaggaggctgagacaggagaattgcttgaacccaggaggcggagattgcaatgagccgagataacaacattgcactccagcctgggcgacagagcaagactACAGCTCaaaaaaaaaa-------- i cebCap1.NW_016108150v1 I 332 C 0 s aotNan1.NW_018494784v1 119265 168 - 211231 -------------aaaaattagccaagcatggtggctcacacctgtagtctaagctccttgggaggctgaggtgggaggactgctggagcccaggaggtggaggttgcagtgagctgagatcacagcactgctctccagcctgggcagcatggcaagactctgtctctaccaagaaaaaaa---- i aotNan1.NW_018494784v1 I 11 I 323 s otoGar3.GL873745 2108194 143 - 2165740 -------------aagaaatagctgggcgttgtg-------------------gctacttgggaagctgagttaagagaatcgcttaagcctacgagtttgaggctgctgtgagccc--acgacgccacagctctctacctagggtgaca----atgactctgcctcaaaaaaaata----aaaa i otoGar3.GL873745 I 488 C 0 e mm10.chr13 74322012 696 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11934261 1339 + 42124431 I a score=127213.000000 s hg38.chr3_KI270934v1_alt 104781 18 + 163458 caaaaaaTTAACAGAAGG s panTro5.chr3 2574831 18 - 202621043 caaaaaaTTAACAGAAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 162950 17 - 190779 -caaaaaTTAACAGAAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 10966 18 - 41186 caaaaaaTTAACAGAAGG i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2886318 18 - 123690457 caaaaaaCTAATAGAAGG i nomLeu3.chr11 I 2 C 0 s rheMac8.chr6 179824456 18 - 180051392 caaaaaaTTAATAGAAGG i rheMac8.chr6 I 1 C 0 s macFas5.chr6 1287950 18 + 181584905 caaaaaaTTAATAGAAGG i macFas5.chr6 I 1 C 0 s macNem1.NW_012013899v1 50285 18 + 100774 caaaaaaTTAATAGAAGG i macNem1.NW_012013899v1 I 1 C 0 s cerAty1.NW_012004452v1 8832 18 - 218577 caaaaaaTTAATAGAAGG i cerAty1.NW_012004452v1 I 1 C 0 s chlSab2.chr4 1382074 18 + 91010382 caaaaaaTTAATAGAAGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 37882 18 + 74206 caaaaaaTTAATAGAAGG i manLeu1.NW_012101728v1 I 1 C 0 s colAng1.NW_012116910v1 783145 18 - 1687011 caaaaaaTTAATAGAAGG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204146035 17 + 204313951 -aaaaaattaatagaaga i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16288338 17 + 16417988 -aaaaaattaatagaaga i saiBol1.JH378155 C 0 I 307 s cebCap1.NW_016108150v1 74353 9 - 306014 -aaaaaaaaa-------- i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2108337 12 - 2165740 agaaaaATTTTT------ i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 119433 323 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11934261 1339 + 42124431 I a score=31542.000000 s hg38.chr3_KI270934v1_alt 104799 5 + 163458 AAAAA s panTro5.chr3 2574849 5 - 202621043 AAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 162967 5 - 190779 AAGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 10984 4 - 41186 AA-AA i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2886336 5 - 123690457 AAAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179824474 5 - 180051392 AAAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1287968 5 + 181584905 ACAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 50303 5 + 100774 AAAAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 8850 5 - 218577 AAAAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1382092 5 + 91010382 ACAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 37900 5 + 74206 AAAAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 783163 5 - 1687011 ACAAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204146052 5 + 204313951 aaaaa i calJac3.chr2 C 0 I 360 s saiBol1.JH378155 16288662 5 + 16417988 aaaaa i saiBol1.JH378155 I 307 C 0 s cebCap1.NW_016108150v1 74362 5 - 306014 aaaaa i cebCap1.NW_016108150v1 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 119433 323 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108349 0 - 2165740 C a score=34350.000000 s hg38.chr3_KI270934v1_alt 104804 9 + 163458 CAAAACGGC- s panTro5.chr3 2574854 9 - 202621043 CAAAAGGGC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 162972 9 - 190779 CAAAAGGGC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 10988 9 - 41186 CAAAAGGGC- i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2886341 9 - 123690457 CAAAAGGTC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179824479 9 - 180051392 CAAAAGGTT- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1287973 9 + 181584905 CAAAAGGTT- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 50308 9 + 100774 CAAAAGGTT- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 8855 9 - 218577 CAAAAGGTT- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1382097 9 + 91010382 CAAAAGGTT- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 37905 9 + 74206 CAAAAGGTT- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 783168 9 - 1687011 CAAAAGGTT- i colAng1.NW_012116910v1 C 0 C 0 s saiBol1.JH378155 16288667 8 + 16417988 aaaaaaGT-- i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 74367 8 - 306014 aaaaaGGT-- i cebCap1.NW_016108150v1 C 0 I 1 s otoGar3.GL873745 2108349 3 - 2165740 -------TTT i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 119433 323 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e calJac3.chr2 204146057 360 + 204313951 I e canFam3.chr34 11934261 1339 + 42124431 I a score=28029.000000 s hg38.chr3_KI270934v1_alt 104813 3 + 163458 TTT s panTro5.chr3 2574863 3 - 202621043 TTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 162981 3 - 190779 TTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 10997 3 - 41186 TTT i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2886350 3 - 123690457 TTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179824488 3 - 180051392 TTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1287982 3 + 181584905 TTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 50317 3 + 100774 TTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 8864 3 - 218577 TTT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1382106 3 + 91010382 TTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 37914 3 + 74206 TTT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 783177 3 - 1687011 TTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204146417 3 + 204313951 TTC i calJac3.chr2 I 360 C 0 s saiBol1.JH378155 16288676 3 + 16417988 TTC i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 74376 3 - 306014 TTC i cebCap1.NW_016108150v1 I 1 C 0 s otoGar3.GL873745 2108352 3 - 2165740 TTT i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 119433 323 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11934261 1339 + 42124431 I a score=2350656.000000 s hg38.chr3_KI270934v1_alt 104816 238 + 163458 CTTATCAAAAATACACTTTAA-GAACAAATTTATAATAttaagttgctgcaaaagtaattgtgccttttaccattgaaagcaatggcaaatactgcaattacttttgctccaacctaaTATTATTTTCTAATGACAAACTTGGAAATAACTG--TCATTGCTCTCTAAAAAGAACAGCCTAAAAA-TAAAGCAGCAGCCCA-TTTACTTCTATGCCAGTTCTTTTAGCATTTGGTTATTTAAA s panTro5.chr3 2574866 239 - 202621043 CTTATCAAAAATACACTTTAAGGAACAAATTTATAATAttaagttgctgcaaaagtaattgtgccttttaccattgaaagcaatggcaaaaactgcaattacttttgctccaacctaaTATTATTTTCTAATGACAAACTTGGAAATAACTG--TCATTGTTCTCTAAAAAGAACAGCCTAAAAA-TAAAGCAGCAGCCCA-TTTACCTCTATGCCAGTTCTTTTAGCATTTGGTTATTTAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 162984 239 - 190779 CTTATCAAAAATACACTTTAAGGAACAAATTTATAATAttaagttgctgcaaaagtaattgtgccttttaccattgaaagcaatggcaaaaactgcaattacttttgctccaacctaaTATTATTTTCTAATGACAAACTTGGAAATAACTG--TCATTGTTCTCTAAAAAGAACAGCCTAAAAA-TAAAGCAGCAGCCCA-TTTACCTCTATGCCAGTTCTTTTAGCATTTGGTTATTTAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 11000 238 - 41186 CTTACC-AAAATACACTTTAAGGAACAAACTTATCATAttaagttggtgcaaaagtaatcgtggcttttaccattgaaagcaatggcaaaaactgcaattacttttgctccaacctaaTATTATTTTCTAATGACAAACTTGGAAATAACTG--TCATTGTTCTCTAAAATGAACAGCCTAAAAA-TAAAGCAGCAGCCCA-TTTACTTCTATGCCAGTTCTTTTAGCATTTGGTTATTTAAA i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2886353 239 - 123690457 CTTACCAATAATACACTTTAAGGAACAAATTTATCATAttaaggtggtgcaaaagtaattgtggcttttaccattgaaagcaatgacaaaaaccgcaattacttttgcaccaacctaaTATTATTTTCTAATGACAAACTTGGAAATAACTG--TCATTGTTCTCTAAAAACAACAGCCTAAAAA-TAAAGTAGCAGCCCA-TTTACTTCTATGCCAGTTCTTTTAGCATTTGGTTATTTAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179824491 239 - 180051392 CTTACCAAAAATACACTTTAAGGAACAAATTTATCATAttaagttggtgcaaaagtaa-tgtggcttttaccattgaaagtaatggcaaaaactgcaattacttttgcaccaacctaaTATTATTTTCTAATGACGAACTTGGAAATAATTG--TCATTATTCTCTAAAAAGAACAGTCTAAAAA-TAAAGCAGCAGCCCATTTTACTTCTACGCCAGTTCTTTTAGTATTTGGCTATTTAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1287985 235 + 181584905 CTTACCAAAAATACACTTTAAGGAACAAATTTATCATAttaagttggtgcaaaat----tgtggcttttaccactgaaagtaatggccaaaactgcaattacttttgcaccaacctaaTACTATTTTCTAATGACAAACTTGGAAATAATTG--TCATTGTTCTCTAAAAAGAACAGCCTAAAAA-TAAAGAAGCAGCCCA-TTTACTTCTATGCCAGTTCTTTTAGTATTTGGTTATTTAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 50320 239 + 100774 CTTACCAAAAATACACTTTAAGGAACAAATTTATCATAttaagttggtacaaaagtaa-tgtggcttttaccattgaaagtaatggcaaaaactgcaattacttttgcaccaacctaaTATTATTTTCTAATGACGAACTTGGAAATAATTG--TCATTATTCTCTAAAAAGAACAGTCTAAAAA-TAAAGCAGCAGCCCATTTTACTTCTACGCCAGTTCTTTTAGTATTTGGCTATTTAAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 8867 238 - 218577 CTTACCAAAAATACACTTTAAGGAATAAATTTATCATAttaagttggtgcaaaagtaa-tgtggcttttaccattgaaagtaatggcaaaaactgcaattacttttgcaccaacctaaTATTATTTTCTAATGACGAACTTGGAAATAATTG--TCATTGTTCTCTAAAAAGAACAGTCTAAAAA-TAAAGCAGCAGCCCA-TTTACTTCTACGCCAGTTCTTTTAGTATTTGGCTATTTAAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1382109 235 + 91010382 CTTACAAAAAATACACTTTAAGGAACAAATTTATCATAttaagttggtgcaaaat----tgtggcttttaccactgaaagtaatggccaaaactgcaattacttttgcaccaccctaaTATTATTTTCTAATGACAAACTTGGAAATAATTG--TCATTGTTCTCTAAAAAGAACAGCCTAAAAA-TAAAGAAGCAGCCCA-TTTACTTCTATGCCAGTTCTTTTAGTATTTGGTTATTTAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 37917 238 + 74206 CTTACCAAAAATACACTTTAAGGAATAAATTTATCATAttaagttggtgcaaaagtaa-tgtggcttttaccattgaaagtaatggcaaaaactgcaattacttttgcaccaacctaaTATTATTTTCTAATGACGAACTTGGAAATAATTG--TCATTGTTCTCTAAAAAGAACAGTCTAAAAA-TAAAGCAGCAGCCCA-TTTACTTCTACGCCAGTTCTTTTAGTATTTGGCTATTTAAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 783180 235 - 1687011 CTTACCAAAAATACACTTTAAGGAACAAATTTATCATAttaagttggtgcaaaat----tatggcttttaccactgaaagtaatggcaaaaactgcaattacttctgcaccaacctaaTATTATTTTCTAATGACAAACTTGGAAATAATTG--TCATTGTTCTCTAAAAAGAACAGTCTAAAAA-TAAAGCAGCAGCCCA-TTTACTTCTATGCCAGTTCTTTCAGTATTTGGTTATTTAAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204146420 239 + 204313951 CTTACCAAAAATACACTTTAAGGAACAAATTTATAATAttaagttagtgcaaaagtaattgtggcttttaccattgaaagtaatggcaaaaaccgcaattacttttgcaccaacttaaAATTATTTTCTAATGACAAACTTGGAAGTACCTG--TCATTGTTCTATAAATAGAACAGCCCAAAAA-TAAAGCAGCAGCCCA-TTTACTTCTACTTCAGTTCCTTTAGTATTTGGTGACTTAGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16288679 239 + 16417988 CTTACCAAAAATACACTTTAAGGAACCAATTTATAATAttaagttggtgcaaaagtaattgtggcttttaccattgaaagtaatggcaaaaaccgcaattacttttgcagcaacctaaAATTATTTTCTAATGACAAACCTGGAAGTACCTG--TCATTATTCTATAAAAACAATAGCCTAAAAA-TAAAGAGGCAGACCA-TTTACTTCTACTTCAGTTCCTTCAGTATTTGGTTACTTAAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 74379 239 - 306014 CTTACCAAAAACACACTTTAAGAAACAAATTTATAATAttaagttggtgcaaaagtaattgtggcttttaccattgaaagtaacggcaaaatccgcaattacttttgcaccaacctaaAATTATTTTCTAATGACAAACTTGGAAGTACCTG--TCATTGTTCTATAAAAAGAACAGCCTAAAAA-TAAAGAAGCAGCCCA-TTTACTTCTACTTCAGTTCCTTGAGTATTCGGTTACTTAAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 119756 239 - 211231 CTTACCAAAAATACACTTTAAGGAACAAATTTATAATAGtaagttggtgcagaagtaattgtggcttttaccattgaaagtaacggcaaaaaccgcaattacttttgcaccaacctaaAATTATGTTCTAATGACAAACTTGGAAGTACCTG--TCATTGTTCTATAAAAAGAACAGCCTAAAAA-TAAAGCAGCAACCCA-TTCACTTCTACTTCAGTTCCTTTAGTATTTGGTTACTTAAA i aotNan1.NW_018494784v1 I 323 C 0 s otoGar3.GL873745 2108355 157 - 2165740 CTTACCAGAAAG--ACTTTAAGGAAAAAATTTATAGTAC-------------------------------------------------------------------------------AGTTATCTTTTTGTAATAACTTTGGAAAAAATAAATTCATTGTATTATGAAAAGAACAGCTTAAAAAGTAAAAAATAAACCCA-TTTACTTCCATGTCATCTCATTTAGTA----GTTATTTAAA i otoGar3.GL873745 C 0 I 87 e mm10.chr13 74322012 696 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11934261 1339 + 42124431 I a score=149462.000000 s hg38.chr3_KI270934v1_alt 105054 16 + 163458 Ccggcagtccctaacc s panTro5.chr3 2575105 16 - 202621043 CTGgcagtccctaacc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 163223 16 - 190779 CTGgcagtccctaacc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 11238 16 - 41186 CTGgcagtccctaacc i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2886592 16 - 123690457 CTGgcggtccctaacc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179824730 16 - 180051392 CTGgcggtccctaacc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1288220 16 + 181584905 CTGGCGGTCCCTAACC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 50559 16 + 100774 CTGgcggtccctaacc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 9105 16 - 218577 CTGgcggtccctaacc i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1382344 16 + 91010382 CTGGCGGTCCCTAACC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 38155 16 + 74206 CTGgcggtccctaacc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 783415 16 - 1687011 CTGACAGTCCCTAACC i colAng1.NW_012116910v1 C 0 I 1631 s calJac3.chr2 204146659 16 + 204313951 Ccagtggtccctaacc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16288918 16 + 16417988 Ccagcggcccctaacc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 74618 16 - 306014 Ccagtggtccctaacc i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 119995 15 - 211231 Ccagtggt-cctaacc i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I a score=884543.000000 s hg38.chr3_KI270934v1_alt 105070 157 + 163458 tttttggcaccagggactggtttcacggaagacactttttccactgacaagt---------gtggggatggtttggagatgaaacggttccatctcagatcatcagtattagattctcataagcggggcataacctagatccttctcatgcgcagttcacaacagg s panTro5.chr3 2575121 157 - 202621043 tttttggcaccagggactggtttcacggaagacactttttccactgacaagt---------gtggggatcgtttggagatgaaacggttccatctcagatcatcagtattagattctcataagcgggacataacctagatccttcgcatgcgcagttcacaacagg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 163239 157 - 190779 tttttggcaccagggactggtttcacggaagacactttttccactgacaagt---------gtggggatcgtttggagatgaaacggttccatctcagatcatcagtattagattctcacaagcggggcataacctagatccttcgcatgcgcagttcacaacaag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 11254 156 - 41186 tttttggcaccagggactggtttcacggaagacactttttccactgacaagt---------gtggggatggtttggagatgaaacggttccatctcagatcatcagtattagattctcataagcggggcataa-ctagatccttcgcatgcgcagttcacaacaag i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2886608 157 - 123690457 tttttggtaccagggactggtttcatggaagacactttttccacggacaagt---------gtggggatggtttggagatgaaacggttccacctcagatcagcagcattagattctcataagcagcgcataacctagacccttggcatgcacagttcacaatagg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179824746 166 - 180051392 gttttggcaccagggactggtttcacggaacacactttttccatggacaagtgtggggatggtggggatggtctggagatgaaacggttccacctcagatcatgagcattaaattctcaaaagcggcgcataacctagatccttcgcatgcgcagttcacaacagg i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 50575 166 + 100774 gttttggcaccagggactggtttcacggaacacactttttccatggacaagtgtggggatggtggggatggtctggagatgaaacggttccacctcagatcatgagcattaaattctcaaaagcggcgcataacctagatccttcgcatgcgcagttcacaacagg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 9121 166 - 218577 gttttggcaccagggactggtttcacggaacacactttttccatggacaagtgtgggcatggtggggatggtctggagatgaaacggttccgcctcagatcatgagcattaaattctcataagcggcacataacctagattcttcgcatgcgcagttcacaacagg i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 38171 166 + 74206 gttttggcaccagggactggtttcacggaacacactttttccatggacaagtgtgggcatggtggggatggtctggagatgaaatggttccgcctcagatcatgagcattaaattctcataagcggcacataacctagatccttcgcatgcgcagttcacaacagg i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204146675 153 + 204313951 tttctggcaccagggactggtttcatggaagacactttttccagggacaagtgtggggatg--ggggatggtttggggacgaaacggttccacctcagatcatcggcattagact-----------cgcataacccagatccctcgaatgtgcagttcacagtagg i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 16288934 161 + 16417988 tctttgtcaccggggactggtttcatgg--gacactttttccagggccaagtgtggggatg--ggggatggtttgaggatgaaacggttccacctcagat-agcggcatcaggctcgcataagcagcgcataacccagatccctcgcatgcacagttcacagtcgg i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 74634 162 - 306014 tttctggcaccagggactggtttcatggaagacacttttcccaggcacaagtgtggggatg--ggggatgg-ttggggatgaaacggtcccacctcagat-ctcagcattagactcgcataagcagcacacaacccagatgcctcgcatgcgcagttcacaatagg i cebCap1.NW_016108150v1 C 0 I 34 s aotNan1.NW_018494784v1 120010 164 - 211231 ttttcggcaccaggaactggtttcatggaagacactttttccagggacgagcgtggggatg--ggggatggtctggggatgaaacggttccacctcagatcgtcggcattagactcgcacaagcagcgcatgacccagatccctggcatgcgcagttcacagtagg i aotNan1.NW_018494784v1 C 0 I 1 e mm10.chr13 74322012 696 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C a score=209136.000000 s hg38.chr3_KI270934v1_alt 105227 40 + 163458 attccactcctatgagaatctaatgccaccactgatctga s panTro5.chr3 2575278 40 - 202621043 gttccactcctatgagaatctaatgccaccactgatctga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 163396 40 - 190779 gttccactcctatgagaatctaatgccaccaccgatctga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 11410 40 - 41186 gttccactcctatgagaatctaatgccaccactgatctga i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2886765 40 - 123690457 gttccactcctatgagaatctaatgccaccactgacctga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179824912 40 - 180051392 gttccactcctatgagaatctaatgccaccactgatctga i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 50741 40 + 100774 gttccactcctatgagaatctaatgccaccactgatctga i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 9287 40 - 218577 gttccactcctatgagaatctaatgccaccactgatctga i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 38337 40 + 74206 gttccactcctatgagaatctaatgccaccactgatctga i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204146829 40 + 204313951 tttgtgctcccaggagaatctaatgccaccgctgatctga i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 16289096 40 + 16417988 ttcgggctcccaggagagtctcatgccaccgctgatctga i saiBol1.JH378155 I 1 I 1 s aotNan1.NW_018494784v1 120175 40 - 211231 tttgtgctcccaggagaatctaatgccaccgccgatctga i aotNan1.NW_018494784v1 I 1 C 0 e mm10.chr13 74322012 696 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C a score=5295.000000 s hg38.chr3_KI270934v1_alt 105267 2 + 163458 ca s panTro5.chr3 2575318 2 - 202621043 ca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 163436 2 - 190779 ca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 11450 2 - 41186 ca i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2886805 2 - 123690457 ca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179824952 2 - 180051392 ca i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 50781 2 + 100774 ca i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 9327 2 - 218577 ca i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 38377 2 + 74206 ca i manLeu1.NW_012101728v1 C 0 C 0 s saiBol1.JH378155 16289137 1 + 16417988 c- i saiBol1.JH378155 I 1 C 0 s aotNan1.NW_018494784v1 120215 2 - 211231 ca i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C a score=4500.000000 s hg38.chr3_KI270934v1_alt 105269 1 + 163458 g s panTro5.chr3 2575320 1 - 202621043 g i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 163438 1 - 190779 g i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 11452 1 - 41186 g i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2886807 1 - 123690457 g i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179824954 1 - 180051392 g i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 50783 1 + 100774 g i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 9329 1 - 218577 g i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 38379 1 + 74206 g i manLeu1.NW_012101728v1 C 0 I 7431 s aotNan1.NW_018494784v1 120217 1 - 211231 g i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C a score=1660.000000 s hg38.chr3_KI270934v1_alt 105270 2 + 163458 ga s panTro5.chr3 2575321 2 - 202621043 ga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 163439 2 - 190779 ga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 11453 2 - 41186 ga i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2886808 2 - 123690457 ga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179824955 2 - 180051392 ga i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 50784 2 + 100774 ga i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 9330 2 - 218577 aa i cerAty1.NW_012004452v1 C 0 C 0 s aotNan1.NW_018494784v1 120218 1 - 211231 g- i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e manLeu1.NW_012101728v1 38380 7431 + 74206 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C a score=42623.000000 s hg38.chr3_KI270934v1_alt 105272 16 + 163458 ggcggagctcacacag s panTro5.chr3 2575323 16 - 202621043 ggcggagctcacacag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 163441 16 - 190779 ggcggagctcacacag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2886810 16 - 123690457 ggcggagctcacacag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179824957 16 - 180051392 ggcggagctcacacag i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 50786 16 + 100774 ggcggagctcacacag i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 9332 16 - 218577 ggcggagttcacacag i cerAty1.NW_012004452v1 C 0 C 0 s aotNan1.NW_018494784v1 120219 16 - 211231 ggcggagctcacacag i aotNan1.NW_018494784v1 C 0 I 7 e mm10.chr13 74322012 696 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e manLeu1.NW_012101728v1 38380 7431 + 74206 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e gorGor5.CYUI01002752v1 11455 0 - 41186 C a score=13896.000000 s hg38.chr3_KI270934v1_alt 105288 12 + 163458 caatgATATGAC s panTro5.chr3 2575339 12 - 202621043 caatgATATGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 163457 12 - 190779 caatgATATGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2886826 12 - 123690457 taatgatctgac i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012013899v1 50802 12 + 100774 taatgatcTGAC i macNem1.NW_012013899v1 C 0 I 14 s cerAty1.NW_012004452v1 9348 12 - 218577 taatgatcTGAC i cerAty1.NW_012004452v1 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e manLeu1.NW_012101728v1 38380 7431 + 74206 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e rheMac8.chr6 179824973 0 - 180051392 C e gorGor5.CYUI01002752v1 11455 0 - 41186 C a score=2082.000000 s hg38.chr3_KI270934v1_alt 105300 12 + 163458 A---------------------------------------------------------GGGGCGGAGCT s panTro5.chr3 2575351 69 - 202621043 AGGGGGCAGAGCTCACACAGAAATGAGGACGGGGCGGAGCTCAGTAATGCTCTGACAGGGGGCGGAGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 163469 13 - 190779 A--------------------------------------------------------GGGGGCGGAGCT i panPan2.chrUn_NW_014024201v1 C 0 I 2 s nomLeu3.chr11 2886838 13 - 123690457 a--------------------------------------------------------gggggcggagct i nomLeu3.chr11 C 0 I 2 s cerAty1.NW_012004452v1 9360 12 - 218577 ---------------------------------------------------------GGAGGCGGAGCT i cerAty1.NW_012004452v1 C 0 I 2 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 50814 14 + 100774 I e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e manLeu1.NW_012101728v1 38380 7431 + 74206 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e rheMac8.chr6 179824973 0 - 180051392 C e gorGor5.CYUI01002752v1 11455 0 - 41186 C a score=60447.000000 s hg38.chr3_KI270934v1_alt 105312 50 + 163458 CACAATAATGATATGACAGGG-GGCGGAGCTCACACAGTAATGATATGAC--A s panTro5.chr3 2575420 48 - 202621043 CACAGTAATGAT--GACAGGG-GGCGGAGCTCACACAGTAATGACAAGAC--A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 163484 49 - 190779 CACAGTAATGATAAGACA-GG-GGCAGAGCTCACACAGTAATGATATGAC--A i panPan2.chrUn_NW_014024201v1 I 2 M 637 s nomLeu3.chr11 2886853 45 - 123690457 cacagtaatgATCTGACA-GG-GGCGGGG--CACACAGTAATGCT--GAC--A i nomLeu3.chr11 I 2 C 0 s rheMac8.chr6 179824973 45 - 180051392 -----taatgatctgaca-ggaggcggagctcacacagtaatgatctgac--a i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 50828 49 + 100774 CACAGTAATGATCTGACA-GG-GGCGGGGCTCACACAGTAACGATCTGAC--A i macNem1.NW_012013899v1 I 14 C 0 s cerAty1.NW_012004452v1 9374 51 - 218577 CACAGTAATGATCTGACG-GA-GGCGGAGCTCACACAGTAATGATCTGACGGA i cerAty1.NW_012004452v1 I 2 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e manLeu1.NW_012101728v1 38380 7431 + 74206 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e gorGor5.CYUI01002752v1 11455 0 - 41186 C a score=31021.000000 s hg38.chr3_KI270934v1_alt 105362 25 + 163458 GGGGGCGGAGCTCACACAGTA---ATGA s panTro5.chr3 2575468 25 - 202621043 GGGGGCAGAGCTCACACAGTA---ATGA i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2886898 28 - 123690457 GGGGGCGGAGCTCACACAGTAATGATGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179825018 25 - 180051392 ggaggcggagctcacacagta---atga i rheMac8.chr6 C 0 I 8 s macNem1.NW_012013899v1 50877 25 + 100774 GGGGGCGGGGCTCACACAGTA---Atga i macNem1.NW_012013899v1 C 0 I 5 s cerAty1.NW_012004452v1 9425 25 - 218577 GGGGGCAGGGCTCACACAGTA---ATGA i cerAty1.NW_012004452v1 C 0 I 4 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e manLeu1.NW_012101728v1 38380 7431 + 74206 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e gorGor5.CYUI01002752v1 11455 0 - 41186 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=17321.000000 s hg38.chr3_KI270934v1_alt 105387 34 + 163458 CA----GGGGGCGGAGCTCACACAGTAATGA--TGACAGC- s panTro5.chr3 2575493 37 - 202621043 CATGACAGGGGCGGAGCTCACACAGTAATGA--CGACGG-- i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2886926 33 - 123690457 CA----GGAGGCGGAGCTCAGACAGTAATGA--TGACAG-- i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012013899v1 50907 36 + 100774 ----caggaggcggagctcacacagtaatgatctgacag-g i macNem1.NW_012013899v1 I 5 C 0 s cerAty1.NW_012004452v1 9454 35 - 218577 ----ACGGAGGCGGAGCTCACACAGTAATGATCTGACGG-- i cerAty1.NW_012004452v1 I 4 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e manLeu1.NW_012101728v1 38380 7431 + 74206 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e rheMac8.chr6 179825043 8 - 180051392 I e gorGor5.CYUI01002752v1 11455 0 - 41186 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=31956.000000 s hg38.chr3_KI270934v1_alt 105421 33 + 163458 GGGCGGAGCTCACACAGTAATGCTCTGGCAGGG- s panTro5.chr3 2575530 32 - 202621043 GGGCAGAGCTCACACAGTAATGATCTGGCA-GG- i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2886959 33 - 123690457 GGGCGGAGCTCACACAGTAAtgatctgacaggg- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179825051 32 - 180051392 GGGCGGGGCTCACACAGTAATGATCTGAC--GGG i rheMac8.chr6 I 8 C 0 s macNem1.NW_012013899v1 50943 33 + 100774 aggcggagctcacacagtaatgatctgaca-gga i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 9489 32 - 218577 AGGCGGAGCTCACACAGTAATGATCTGAC--GGA i cerAty1.NW_012004452v1 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e manLeu1.NW_012101728v1 38380 7431 + 74206 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e gorGor5.CYUI01002752v1 11455 0 - 41186 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=37534.000000 s hg38.chr3_KI270934v1_alt 105454 21 + 163458 GGCGGAGCTCACACAGTAATG s panTro5.chr3 2575562 21 - 202621043 GGTGGAGCTCACACAGTAAtg i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2886992 21 - 123690457 ggcggagctcagacagtaatg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179825083 21 - 180051392 GGCGGGGCTCACACAGTAACG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 50976 21 + 100774 ggcggagctcacacagtaatg i macNem1.NW_012013899v1 C 0 T 183 s cerAty1.NW_012004452v1 9521 21 - 218577 GGCGGAGTTCACACAGTAATG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 45811 21 + 74206 GGCGGGGCTCACACAGTAAtg i manLeu1.NW_012101728v1 I 7431 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e gorGor5.CYUI01002752v1 11455 0 - 41186 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=74447.000000 s hg38.chr3_KI270934v1_alt 105475 116 + 163458 CTCTGGCAGGGGGCGGAGCTCACACAGTAATGA--TGACAGGGGGCGGAGCTCACACAGTAATG--ATGACAGGGGGCAGAGCT--CACAGTAATGCTCTGGCAG-GGGGCGGAGCTCACACA s panTro5.chr3 2575583 58 - 202621043 atatgacagggggcggagctca----------------------------------------------------------------cacagtaatgctcTGGCAGAGGGGCGGAGCT-ACACA i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2887013 118 - 123690457 ATTTGACAGGGGGCAGAGCTCA--CAGTAAtgatctgacaggaggcggagctcagacagtaatg--ctgacagggggcggAGCTCACACAGTAAtgatctgacag-ggggcggaactcagaca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179825104 90 - 180051392 ATCTGACAGGGGGCGGGGCTCACACAGTAAtgat--------------------------------ctgacaggaggcggagctcacacagtaatgatctgacag-gaggcggagctcacaca i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012004452v1 9542 120 - 218577 ATCTGAC-GGAGGCGGAGTTCACACAGTAATGATCTGAC-GGAGGTGGAGTTCACACAGTAATGATCTGACAGGGGGCGGGGCTCACACAGTAATGATCTGACAG-GGGGCGGAGCTCACACA i cerAty1.NW_012004452v1 C 0 T 271 s manLeu1.NW_012101728v1 45832 119 + 74206 atctgacaggaggcggggctcacacagtaatgatctgacaggaggcggggctcacacagtaatgatcTGACAGGGGGCGGGGCT--CACAGTAATGATCTGAC-G-GGGGCGGGGCTCACACA i manLeu1.NW_012101728v1 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 50997 183 + 100774 T e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e gorGor5.CYUI01002752v1 11455 0 - 41186 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=10150.000000 s hg38.chr3_KI270934v1_alt 105591 16 + 163458 GTAATGCTCTGGCAGG s panTro5.chr3 2575641 16 - 202621043 GTAATGCCCTGGCAGG i panTro5.chr3 C 0 I 260 s nomLeu3.chr11 2887131 16 - 123690457 gtaatgatttgacagg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179825194 15 - 180051392 gtaatgatcTGAC-GG i rheMac8.chr6 C 0 C 0 s manLeu1.NW_012101728v1 45951 16 + 74206 GTAATGATCTGACAGG i manLeu1.NW_012101728v1 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 50997 183 + 100774 T e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e cerAty1.NW_012004452v1 9662 271 - 218577 T e macFas5.chr6 1288236 0 + 181584905 C e gorGor5.CYUI01002752v1 11455 0 - 41186 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=8964.000000 s hg38.chr3_KI270934v1_alt 105607 16 + 163458 GGGCGGAGCTCACACA s nomLeu3.chr11 2887147 16 - 123690457 gggcggagctcacaca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179825209 16 - 180051392 GGGCGGGGCTCACACA i rheMac8.chr6 C 0 C 0 s manLeu1.NW_012101728v1 45967 16 + 74206 GGGCGGAGCTCACACA i manLeu1.NW_012101728v1 C 0 I 149 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 50997 183 + 100774 T e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e cerAty1.NW_012004452v1 9662 271 - 218577 T e macFas5.chr6 1288236 0 + 181584905 C e gorGor5.CYUI01002752v1 11455 0 - 41186 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M e panTro5.chr3 2575657 260 - 202621043 I a score=9887.000000 s hg38.chr3_KI270934v1_alt 105623 50 + 163458 GTAATG--CTGACGGG-GGTGGAGCTCACACAGTAATGCTGACAGGGGGTGGA s nomLeu3.chr11 2887163 53 - 123690457 gtaatgatctgacaggaggcagagctcagacagtaatgctGACAGAAGGCGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179825225 52 - 180051392 GTAATGATCTGACCGG-GGCGGGGCTCACACAGTAATGATGACAGGGGGCGGA i rheMac8.chr6 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 50997 183 + 100774 T e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e manLeu1.NW_012101728v1 45983 149 + 74206 I e chlSab2.chr4 1382360 0 + 91010382 C e cerAty1.NW_012004452v1 9662 271 - 218577 T e macFas5.chr6 1288236 0 + 181584905 C e gorGor5.CYUI01002752v1 11455 0 - 41186 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M e panTro5.chr3 2575657 260 - 202621043 I a score=8289.000000 s hg38.chr3_KI270934v1_alt 105673 23 + 163458 GCTCACACAGTAATACTCTGGCA s panTro5.chr3 2575917 22 - 202621043 GCTCACACAGTA-TGCTCTGGCA i panTro5.chr3 I 260 C 0 s nomLeu3.chr11 2887216 22 - 123690457 GCTCACACAGTAATGATCTGAC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179825277 23 - 180051392 GCTCACACAGTAAtgatctgaca i rheMac8.chr6 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 50997 183 + 100774 T e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e manLeu1.NW_012101728v1 45983 149 + 74206 I e chlSab2.chr4 1382360 0 + 91010382 C e cerAty1.NW_012004452v1 9662 271 - 218577 T e macFas5.chr6 1288236 0 + 181584905 C e gorGor5.CYUI01002752v1 11455 0 - 41186 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=68100.000000 s hg38.chr3_KI270934v1_alt 105696 226 + 163458 GGGGGCGGAGCTCA-CACAGCAAt-gctctgac--agggggcagagctcacacagtaat-gctcTGGCAGGGGGCGGAGCTCACAC-AGTAATG--CCGAC-------GGGGGTGGAGCTCACACAGTAAT-GCT---GACAGGGGGTGGAGCTCACACAG-TAATACTCTGGCAGGGGGCGGAGCTCACACAGC-AATG-CTCTGAC--GGGGCAGAGCTCACACAGTAATACTCTGGCAGGGGGCGGA s panTro5.chr3 2575939 243 - 202621043 GGGGGCGGCGCTCATCACAGTAATAGCTCTGGC--AGGGGGCGGAGCTCACACAGTAATCGCTCTGGCAGGGGGCGGAGCTCACACCAGTAATG--CTGTCTGGCAGTGGGGCGCGAGTACACACAGTAATTGCTCTAGGCAGGGGGCGGAGC-CTCACAGCTAATGCTCTGGCAGGGGGCTGAGCTCACACAGCTAATGGCTCTGGCA-GGGGCGGAGCTCACACAGTAATGCTCTGG-AGGGGGCGCG i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2887238 198 - 123690457 -GGGGCGGAGCTCA-GACAGTAAT-GATTTGAC--AGGGGGCGTAGCTCACACAGTAAt-gatctgacaggaggcagagctcagac---------------------------------------agtaat-gct---gacaggaggcggAGCTCACACAG-TAAtgatctgacagggggcggagctcagacagt-aatg-atttgacagggggcggagctcacacagtaatgatctgacaggaggcaga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179825300 194 - 180051392 ggaggcggagctca-cacagtaat-gatcTGAC---GGGGGCGGGGCT--CACAGTAAt-gatctgacaggaggtggagctcacac-agtaatgatcTGAC-------GGGGGCGGGGCTCAC--AGTAAT-GATCT-GAC-GGGGGCGGGGCTCACACAG-TAAtgatctgacaggaggcggagctcacacagt-aatg-atctgacaggaggcgga-------------------------------- i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012004452v1 9391 136 - 218577 GGAGGCGGAGCTCA-CACAGTAAT-GATCTGACGGAGGGGGCAGGGCTCACACAGTAAT-GATCTGAC-GGAGGCGGAGCTCACAC-AGTAATGATCTGAC-------G-------------------------------------------------------------------GAGGCGGAGCTCACACAGT-AATG-ATCTGAC-GGAGGCGGA-------------------------------- i cerAty1.NW_012004452v1 T 271 I 532 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 50997 183 + 100774 T e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e manLeu1.NW_012101728v1 45983 149 + 74206 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e gorGor5.CYUI01002752v1 11455 0 - 41186 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=63289.000000 s hg38.chr3_KI270934v1_alt 105922 118 + 163458 GCTCACACA-GTAATGCTCTGACAGGGGGCGGAGCTCACACAGTA-AT-CTCTGGCAGGGGGCGG-AGCTCACACAGTAATGCTCTGCCAGGGGGCGG--AGCTCACACAGTAATGCTCTGCCA s panTro5.chr3 2576182 119 - 202621043 AGTCACACAAGTAATGCTCTGGCAGGGG-CGGAGC-CACACAGTAGATGCTCTG-CAGTGGGCGGGAGCTCACA--ATTATGCTCTGGCAGTGGGCGGTGAGCTCACACAGTAATCCTCTGGCA i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2887436 117 - 123690457 gctcacaca-gtaatg--ctGACAGGAGGTGGAGCTCACACAGTA-Atgatctgacagggggcgg-agctcagacagtaatgatttgacaggaggcgg--agctcacacagtaatgatctgaca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179825494 115 - 180051392 gctcacaca-gtaatgatcTGAC-GGGGGCGGGGCT--CACAGTA-ATGATCTGAC-GGGGGCGG-GGCTCACACAGTAAtgatctgacaggaggcgg--agctcacacagtaatgatctgaca i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012004452v1 10059 115 - 218577 GCTCGCACA-GTAAtgatctgacaggaggcggagct--cacagta-atgatctgacaggaggcgg-aact--cacagtaatgatctgacaggaggcgg--agctcacacagtaatgctctggca i cerAty1.NW_012004452v1 I 532 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e macNem1.NW_012013899v1 50997 183 + 100774 T e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e manLeu1.NW_012101728v1 45983 149 + 74206 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e gorGor5.CYUI01002752v1 11455 0 - 41186 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=31594.000000 s hg38.chr3_KI270934v1_alt 106040 40 + 163458 GGGGGCGGAGCTCACACAGTAATC-TCTGGCAGG-GGGCGGA s panTro5.chr3 2576301 41 - 202621043 GTGGGCGGAGCTCACACAGTAATGATCTGGCAGG-GGCGGAA i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2887553 38 - 123690457 ggaggcggagctcagacagtaatg--ATGACAGG-GG-CGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179825609 40 - 180051392 ggaggcgaagctcacacagtaatgatcTGACGGG-GGCGGG- i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 50814 40 + 100774 GGAGGCGGAGCTCACACAGTAATGATCTGACAGG-GGCGGG- i macNem1.NW_012013899v1 T 183 C 0 s cerAty1.NW_012004452v1 10174 41 - 218577 ggaggtggagctcacacagtaatgctctggcaggaggcgga- i cerAty1.NW_012004452v1 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e manLeu1.NW_012101728v1 45983 149 + 74206 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e gorGor5.CYUI01002752v1 11455 0 - 41186 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=86861.000000 s hg38.chr3_KI270934v1_alt 106080 58 + 163458 GCTCACACAGTAAtgctctgacagggggcggagctcacac-agtaatgctcTGGCAGGG s panTro5.chr3 2576342 58 - 202621043 GCTCACACAGTAATGCTCTGG-AGTGGGCGGAGCTCACACCAGTAATCCTCTGGCAGGG i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2887591 58 - 123690457 GCTCACACAGTAAtgatctgacagggggcggagctcagac-agtaatgctctgacagga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179825649 56 - 180051392 GCT--CACAGTAAtgatctgacagggggcggagctcacac-agtaatgatctgacagga i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 50854 58 + 100774 GCTCACACAGTAACGATCTGACAGGGGGCGGGGCTCACAC-AGTAAtgatctgacagga i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 10215 58 - 218577 gctcacacagtaatgctctggcaggaggcggagctcacac-agtaatgctctggcagga i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 46132 56 + 74206 GCTCGCACAGTAAtgatctgacaggaggcggagct--cac-agtaatgatctgacagga i manLeu1.NW_012101728v1 I 149 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e gorGor5.CYUI01002752v1 11455 0 - 41186 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=132417.000000 s hg38.chr3_KI270934v1_alt 106138 59 + 163458 GGCGGAGCTCACACAGTAAtgctctggcagggggtggagctcacacagtaatgctctgg s panTro5.chr3 2576400 59 - 202621043 GGCGGAGCTCACACAGTAAtgatctggcagggggcggagctcacacagtaatgctctgg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01002752v1 11455 59 - 41186 ggcgaagctcacacagtaatgccctggcagggggcggagctcacacagtaatgctctgg i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2887649 57 - 123690457 ggcggagctcagacaataataatctggctgggggtggagct--cacagtaatgctctga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179825705 59 - 180051392 ggcggagctcacacagtaatgatctgacagaaggtggagctcacagagtaatgctctgg i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 50912 59 + 100774 ggcggagctcacacagtaatgatctgacaggaggcggagctcacacagtaatgatctga i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 10273 59 - 218577 ggtggagctcacacagtaatgctctggcaggaggtggagctcacacagtaatgctctgg i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 46188 59 + 74206 ggcggagctcacacagtaatgctctggcaggaggtggagctcacacagtaatgctctgg i manLeu1.NW_012101728v1 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16289138 0 + 16417988 C e calJac3.chr2 204146869 0 + 204313951 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=9878.000000 s hg38.chr3_KI270934v1_alt 106197 4 + 163458 cagg s panTro5.chr3 2576459 4 - 202621043 cagg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01002752v1 11514 4 - 41186 cagg i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2887706 4 - 123690457 cagg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179825764 4 - 180051392 cagg i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 50971 4 + 100774 cagg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 10332 4 - 218577 cacg i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 46247 4 + 74206 caca i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204146869 4 + 204313951 cagg i calJac3.chr2 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e saiBol1.JH378155 16289138 0 + 16417988 C e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=15325.000000 s hg38.chr3_KI270934v1_alt 106201 5 + 163458 gggcg s panTro5.chr3 2576463 5 - 202621043 gggcg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01002752v1 11518 5 - 41186 gggcg i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2887710 5 - 123690457 gggct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179825768 5 - 180051392 gggcg i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 50975 5 + 100774 aggcg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 10336 5 - 218577 gggca i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 46251 5 + 74206 gggca i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204146873 3 + 204313951 --gcg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16289138 5 + 16417988 gggcg i saiBol1.JH378155 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e cebCap1.NW_016108150v1 74796 34 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=88336.000000 s hg38.chr3_KI270934v1_alt 106206 28 + 163458 gagctcacacagtaatgctcactggctg s panTro5.chr3 2576468 28 - 202621043 gagctcacacagtaatgctcactggccg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01002752v1 11523 28 - 41186 gagctcacacagtaatgctcactggctg i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2887715 28 - 123690457 gaactcacacagtaatgctcactggccg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179825773 28 - 180051392 gagctcacacagtaatgttcactggcca i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 50980 28 + 100774 gagctcacacagtaatgttcactggcca i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 10341 28 - 218577 gagctcacacagtaatgttcactggcca i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 46256 16 + 74206 gagctca------------cactggcca i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204146876 28 + 204313951 gagctcacatagtcaggctcactggcct i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16289143 17 + 16417988 gagctcacacagtcagg----------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 74830 28 - 306014 gagctcacacagtcaggctccctggcct i cebCap1.NW_016108150v1 I 34 C 0 e mm10.chr13 74322012 696 + 120421639 I e aotNan1.NW_018494784v1 120235 7 - 211231 I e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=525371.000000 s hg38.chr3_KI270934v1_alt 106234 99 + 163458 gctgctcacctcctactgtgtggcctggttcctaacaggccatggactgg-aacaatctgtggcctggggattggggacccctgATTTAAAGAATCGAGG s panTro5.chr3 2576496 100 - 202621043 gctgctcacctcctactgtgtggcctggttcctaacaggccatggactggtaacaatctgtggcctggggattggggacccgtgATTTAAAGAATCGAGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01002752v1 11551 100 - 41186 gctgctcaccccctactgtgtggcctggttcctaacaggccatggactggtaacaatctgtggcctggggattggggacccctgATTTAAAGAATCGAGG i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2887743 100 - 123690457 gctgctcacctcctactgtgtggcctggttcctaacaggccatggactggtaatgatctgtggcctggggattggggaccactgATTTAAATAATCAAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179825801 100 - 180051392 gctgcccaccccctactgtgcggcccggttcctaacaggccatggagtggtaccaatttgtggcctggggattggggacccctgATTTAAATAATCGAGG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 51008 100 + 100774 gctgcccaccccctactgtgccggccggttcctaacaggccatggagtggtaccaatttgtggcctggggattggggacccctgATTTAAATAATCGAGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 10369 100 - 218577 gctgctcaccccctactgtgcagcccggttcctaacaggccatggaatggtaccaatctgtggcctggggattggggacccctgATTTAAATAATCGAGG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 46272 100 + 74206 gctgctcaccccctactgtgcagcccggttcctaacaggccatggaatggtaccaatctgtggcctggggattggggacccctgATTTAAATAATCGAGG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204146904 100 + 204313951 gctgctcacctcctgctgtgtgttctggttcctaacaggccacgggctggtaacaatctgtggcctagggactggggagccctgATTTAAATAATCGAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16289160 91 + 16417988 ---------ctcctgctgtgcggcctggttcctaacaggccacgggctggtagcaatctgtggcctagggactggggagccctgATTTAAATAATCAAGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 74858 100 - 306014 gctgctcaccgcctgctgtgcggcctggttcctaacaggccatgggctagtaacagtctgtggcctagggactggggagccctgATTTAAATAATCGAGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 120242 100 - 211231 gctgctcacctcctgctgtgtggcccggttcctaacaggccatgggctggtaacaatctgtggcctagggactggggagccctgATTTAAATAATCGAGG i aotNan1.NW_018494784v1 I 7 C 0 e mm10.chr13 74322012 696 + 120421639 I e dasNov3.JH577625 335242 13689 - 913073 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=478369.000000 s hg38.chr3_KI270934v1_alt 106333 82 + 163458 ACACACTCACCTAGCAAACCATCTG----CTAAGAAAAAAGGAGGAA-------------------------AAGCACCAACATTAATTTGAACTTAGAAATAAACTACAA s panTro5.chr3 2576596 78 - 202621043 ACACAC----CTAGCAAACCATCTG----CTAAGAAAAAAGGAGGAA-------------------------AAGCACAAACATTAATTTGAACTTAGAAATAAACTACAA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01002752v1 11651 82 - 41186 ACACACTCACCTAGCAAACCATCTG----CTAAGAAAAAAGGAGGAA-------------------------AAGCACCAACATTAATTTGAACTTAGAAATAAACTACAA i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2887843 81 - 123690457 ACACACTCACCTAGTAAACCATCTG----CCAA-CAAAAAGGAGGAA-------------------------AAGCATCAACATTAATTTGAACTTAGAAATAAACTACAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179825901 106 - 180051392 ACACACTGACCTAGTAAACCATCTG----CCAA-GAAAAGGGAGGAAATACTAGTTTTCTCCATTCGCTCTCAGGCACCAACATTAATTTGAACTTAGAAATAAACTACAA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 51108 106 + 100774 ACACACTGACCTAGTAAACCATCTG----CCAA-GAAAAGGGAGGAAATACTAGTTTTCTCCATTCGCTCTCAGGCACCAACATTAATTTGAACTTAGAAATAAACTACAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 10469 106 - 218577 ACACACTGACCTAGTAAACCATCTG----CCAA-GAAAAGGGAGGAAATACTAGTTTTCTCCATTTGCTCTCAGGCACCAACATTAATTTGAACTTAGAAATAAACTACAA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 46372 106 + 74206 ACACACTGACCTAGTAAACCATCTG----CCAA-GAAAAGGGAGGAAATACTAGTTTTCTCCATTTGCTCTCAGGCACCAACATTAATTTGAACTTAGAAATAAACTACAA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204147004 106 + 204313951 ACACGCTTACCTAGTAAACCGTCTG----TCAA-GAAAAAGGAGGAAATGTTCATTTTCTCCATCTGCTCTCAGGCACCAACGTCAATTTGAACTTACAAATAAACAACAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16289251 106 + 16417988 ACACGCTTACCTAGTAAACCGTCTG----TCAA-GAAAAAGGAGGAAATGTTCATTTTCTCCATCCGCTCTCAGGCACCAACATCAATTTGAACTTAGAAGTAAATTACAT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 74958 106 - 306014 ACACGCTTACCTAGTAAACCGTCTG----TCAA-GAAAAAGGAGGAAATGTTCGTTTTCTCCATCCGCTCTCAGGCACCAACATCAATTTGAATTTAGAAATAAACTACAT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 120342 106 - 211231 ACACGCTTACCTAGTAAACCATCTC----TCAA-GAAAAAGGAGGAAATGTTCGTTTTCGCCATCCGCTCTCAGGCACCAACATCGATTCGAACTTGGAAATAAACTACAT i aotNan1.NW_018494784v1 C 0 C 0 s dasNov3.JH577625 348931 110 - 913073 ACAAGTTCACCTAATAAACCATCTGCATACTAA-GAACAAGGAAGAAATGTTAGTTTTCTTCTTTTGCTGTTAGATACCAATGTTCATTTTTACTTAAAATTAAACTACAA i dasNov3.JH577625 I 13689 I 370 e mm10.chr13 74322012 696 + 120421639 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=275215.000000 s hg38.chr3_KI270934v1_alt 106415 52 + 163458 ---ggccagacatggtggttcacacctataattccagcacttcgggaggccaagg s panTro5.chr3 2576674 55 - 202621043 TAAggccagacatggtggttcacacctataattccagcacttcaggaggccaagg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01002752v1 11733 54 - 41186 TAAggccagacatggtgcttcacacctataattccagcacttc-ggaggccaagg i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2887924 55 - 123690457 CAAggccaaacatggtagttcacacctacaattccagcactttgggaggccaagg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179826007 55 - 180051392 TAAggccaggcacggtggttcacacctataattccagcactttgggaggccaagg i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 51214 55 + 100774 TAAggccaggcacggtggttcacacctataattccagcactttgggaggccaagg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 10575 55 - 218577 CAAggccaggcatggtggttcacacctataattccagcactttgggaggccaagg i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 46478 55 + 74206 CAAggccaggcatggtggttcacacctataattccagcactttgggaggccaagg i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204147110 55 + 204313951 CAAGTccaggcatggtggttcacacctatcattccagcactttgggaggccaagg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16289357 55 + 16417988 CGAGTccaggcatggtggttcacacctataatcccagcactttgggaggccaagg i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 75064 54 - 306014 CAgg-ccgggcgcggtggctcaagcctgtaatcccagcactttgggaggccgagg i cebCap1.NW_016108150v1 C 0 I 595 s aotNan1.NW_018494784v1 120448 54 - 211231 GGAGTccaggcatgg-ggttcacacctataattccggcactgtgggaggccaagg i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e dasNov3.JH577625 349041 370 - 913073 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=841202.000000 s hg38.chr3_KI270934v1_alt 106467 190 + 163458 aggaacgatcacttaagcccagcagtttgagaccagcctaggcaacaaagtgagaccctgtccctacaattacaaaataaatgagctgggcgtggtggtgcacacctgtagccccagctacttagaaggctgagtcgggaagatcacctgagctgcccaggagtttgaggctgcagtgagctgagactgc s panTro5.chr3 2576729 190 - 202621043 aggaacgatcacttgagcccagcagtttgagatcagcctaggcaacacagtgagaccctgtccctacaattacaaaataaatgagctgggcatggtggtgcacacctgtagccccagctactcagaaggctgagttgggaagatcacctgagctgcccaggagtttgaggctgcagtgagctgagactgc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01002752v1 11787 190 - 41186 agggacgatcacttgagcccagcagtttgagaccagcctaggcaacacagtgagaccctgtccctacaattaaaaaataaatgagctgggcgtggtggtgcacacctgtagccccaactgctcagaaggctgagtcaggaagatcacctgagctgcccaggagtttgaggctgcagtgagctgagactgc i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2887979 190 - 123690457 agggacgatcacttgagcccagcagtttgagaccagcctaggcaacacagtgagaccctgtccctacaattacaaaataaatgagctgggtgtggtggtgcacacctgtagccccaactactcagaaggctgagtcgggaagatcaccggagctgcccaggagtttgaggctgcagtgagctgagactgc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179826062 190 - 180051392 aggaaggatcacctgagcccaggagtttgagaccagcctaggcaacatagtgagaccctgtccctacaattaaaaaataaattagctgggcatggtggtgcacacctgtagccccaactactcagaaggctgggttgggaagatcacttgagccgcccaggagtttgaggctgcagtaaactgagactgc i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 51269 186 + 100774 aggaaggatcacctgagcccaggagt----gaccagcctaggcaacatagtgagaccctgtccctacaattaaaaaataaattagctgggcatggtggtgcacacctgtagtcccaactactcagaaggctgggttgggaagatcacttgagccgcccaggagtttgaggctgcagtaaacttagactgc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 10630 190 - 218577 aggaaggatcacctgagcccaggagtttgagaccagcctaggcaacatagtgagaccctgtccctacaattaaaaaataaattagctgggcatggtggtgcacacctgtagccccaactactcagaaggctgggttgggaagatcacttgagccgcccaggagtttgaggctgcagtaaactgagactgc i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 46533 190 + 74206 aggaaggatcacctgagcccaggagtttgagaccagcctaggcaacatagtgagaccctgtccctacaattaaaaaataaattagctgggcatggtggtgcacacctgtagccccaactactcagaaggctgggttgggaagatcacttgagccgcccaggagtttgaggctgcagtaaactgagactgc i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204147165 188 + 204313951 atggaggatcacttgaacccaggagtttgagaccaggctaggcaacatggtgagacc--gtttctacaattaaaaaataaactggctgggcatggtggtgcacacctatagccccaactgctcaggaggctgggctgggaggatcacctgagcctcccaggagtctgaggctgcagcgagctgagattgc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16289412 188 + 16417988 acggaggatcacttgagcccaggagtttgagaccagcctaggcaacatagtgagacc--atttctacaattaaaaaataaactggctggacatggtggtgcacacctatagccccaactgctcaggaggctgagtcgggaagatcacttgagcctcccaggagtctgaggctgcagtgagctgagattgc i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 120502 188 - 211231 acggaggatcacttgagcccaggggtttgagaccagcctaggcagcatagtgagacc--atttctacaattaaaaaataaactggctgggcatggtggtgcacacctatagccccaactgctcgggaggctgagttgggaagatcacttgagcctctcaggagtctgaggctgcagttggctgagatcgc i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e dasNov3.JH577625 349041 370 - 913073 I e cebCap1.NW_016108150v1 75118 595 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=110416.000000 s hg38.chr3_KI270934v1_alt 106657 19 + 163458 acca--------accctgtctcaaaaa s panTro5.chr3 2576919 27 - 202621043 accactgcaccaacctggtctcaaaaa i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01002752v1 11977 27 - 41186 accactgcaccaaccctgtctcaaaaa i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2888169 27 - 123690457 accactgcaccgatcctgtctcaaaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179826252 27 - 180051392 accactgcactgatcctgtctcaaaaa i rheMac8.chr6 C 0 I 1 s macNem1.NW_012013899v1 51455 27 + 100774 accactgcactgatcctgtctcaaaaa i macNem1.NW_012013899v1 C 0 I 1 s cerAty1.NW_012004452v1 10820 27 - 218577 accactgcactgatcctgtctcaaaaa i cerAty1.NW_012004452v1 C 0 I 1 s manLeu1.NW_012101728v1 46723 27 + 74206 accactgcactgatcctgtctcaaaaa i manLeu1.NW_012101728v1 C 0 I 1 s calJac3.chr2 204147353 27 + 204313951 accactgcactgatcctgtctcaaaaa i calJac3.chr2 C 0 I 10 s saiBol1.JH378155 16289600 27 + 16417988 accactgcactgatcccgtctccaaaa i saiBol1.JH378155 C 0 I 9 s aotNan1.NW_018494784v1 120690 27 - 211231 accactgcagtgatcctgtctccaaaa i aotNan1.NW_018494784v1 C 0 I 2 s mm10.chr13 74322708 19 + 120421639 --------ACCTGCCCTACTTCACACA i mm10.chr13 I 696 C 0 e dasNov3.JH577625 349041 370 - 913073 I e cebCap1.NW_016108150v1 75118 595 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e panPan2.chrUn_NW_014024201v1 163533 637 - 190779 M a score=-7487.000000 s hg38.chr3_KI270934v1_alt 106676 4 + 163458 -aaaa------- s panTro5.chr3 2576946 4 - 202621043 -aaaa------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 164170 4 - 190779 -aaaa------- i panPan2.chrUn_NW_014024201v1 M 637 C 0 s gorGor5.CYUI01002752v1 12004 1 - 41186 ----a------- i gorGor5.CYUI01002752v1 C 0 C 0 s rheMac8.chr6 179826280 11 - 180051392 -agaaaagaaag i rheMac8.chr6 I 1 C 0 s macNem1.NW_012013899v1 51483 11 + 100774 -agaaaagaaag i macNem1.NW_012013899v1 I 1 C 0 s cerAty1.NW_012004452v1 10848 4 - 218577 -agaa------- i cerAty1.NW_012004452v1 I 1 C 0 s manLeu1.NW_012101728v1 46751 4 + 74206 -agaa------- i manLeu1.NW_012101728v1 I 1 C 0 s calJac3.chr2 204147390 4 + 204313951 -aaga------- i calJac3.chr2 I 10 C 0 s saiBol1.JH378155 16289636 4 + 16417988 -aaga------- i saiBol1.JH378155 I 9 C 0 s aotNan1.NW_018494784v1 120719 1 - 211231 ----a------- i aotNan1.NW_018494784v1 I 2 C 0 s mm10.chr13 74322727 5 + 120421639 GAGAA------- i mm10.chr13 C 0 C 0 e dasNov3.JH577625 349041 370 - 913073 I e cebCap1.NW_016108150v1 75118 595 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C e nomLeu3.chr11 2888196 0 - 123690457 C a score=31154.000000 s hg38.chr3_KI270934v1_alt 106680 12 + 163458 aaaaaaaaaaag- s panTro5.chr3 2576950 7 - 202621043 aaaaaa-----g- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 164174 12 - 190779 aaaaaaaaaaac- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 12005 12 - 41186 aaaaaaaaaaaG- i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2888196 8 - 123690457 ----taaaaaag- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179826291 12 - 180051392 aagaaaaaaaag- i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 51494 12 + 100774 aagaaaaaaaaG- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 10852 12 - 218577 aagaaaaaaaag- i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 46755 12 + 74206 aagaaaaaaaag- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204147394 12 + 204313951 agaagaaagaaG- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16289640 12 + 16417988 agaagaagaaaG- i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 120720 12 - 211231 agaagacgaaag- i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74322732 11 + 120421639 TGAACAAAACA-- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 349411 12 - 913073 -aaaaaataaaTT i dasNov3.JH577625 I 370 C 0 e cebCap1.NW_016108150v1 75118 595 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e otoGar3.GL873745 2108512 87 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C a score=33408.000000 s hg38.chr3_KI270934v1_alt 106692 6 + 163458 aaaCTG s panTro5.chr3 2576957 6 - 202621043 aaaCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 164186 6 - 190779 aaacta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 12017 6 - 41186 GAACTG i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2888204 6 - 123690457 aaaCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179826303 6 - 180051392 aAACCA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 51506 6 + 100774 AAACCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 10864 6 - 218577 aaaCCA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 46767 6 + 74206 aaaCCA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204147406 6 + 204313951 AAACTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16289652 6 + 16417988 AAACTG i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 120732 6 - 211231 aaaCTG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2108599 6 - 2165740 AAATTA i otoGar3.GL873745 I 87 C 0 s mm10.chr13 74322743 5 + 120421639 ATACT- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 349423 6 - 913073 AAACTA i dasNov3.JH577625 C 0 C 0 e cebCap1.NW_016108150v1 75118 595 - 306014 I e canFam3.chr34 11934261 1339 + 42124431 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C a score=27776.000000 s hg38.chr3_KI270934v1_alt 106698 3 + 163458 CAA s panTro5.chr3 2576963 3 - 202621043 CAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 164192 3 - 190779 caa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 12023 3 - 41186 CAA i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2888210 3 - 123690457 TAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179826309 3 - 180051392 CAA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 51512 3 + 100774 CAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 10870 3 - 218577 CAA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 46773 3 + 74206 CAA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204147412 3 + 204313951 CAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16289658 3 + 16417988 CAA i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 120738 3 - 211231 CAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2108605 3 - 2165740 CAA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11935600 3 + 42124431 CAA i canFam3.chr34 I 1339 C 0 s dasNov3.JH577625 349429 3 - 913073 CAA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74322748 0 + 120421639 C e cebCap1.NW_016108150v1 75118 595 - 306014 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C a score=1453439.000000 s hg38.chr3_KI270934v1_alt 106701 179 + 163458 CAAAATATCTGGATTTTGATGTAACAGAATAC--AAAGATAATTACATTTGAT-TTTTAGGTCAACA-AATATGAC--AAGTCATAACAGGAAAATATTTTAAATGG--ATTTGGAAATAAAAGAAAGTTTGTTCATTTATATTTTATTTAACAGCTGTGCCCAGTTTTATCTTGTCACAAGAATGA s panTro5.chr3 2576966 179 - 202621043 CAAAATATCTGGATTTTGATGTAACAGAATAC--AAAGATAATTACATTTGAT-TTTTAGGTCAACA-AATATGAC--ACGTCATAACAGTAAAATATTTGACATGG--ATTTGGAAATAAAAGAAAGTTTGTTCATTTATATTTTATTTAAGAGCTGTGCCCAGTTTTATCTTGTCACAAGAATGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 164195 180 - 190779 caaaaTATCTGGATTTTGATGTAACAGAATAC--AAAGATAATTACATTTGAT-TTTTAGGTCAACA-AATATGACTAAAGTCACAACAGTAAAATATTTTAAATGG--ATTTGGAAAT-AAAGAAAGTTTGTTCATTTATATTTTATTTAAGAGCTGTGCCCAGTTTTATCTTGTCACAAGAATGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 12026 179 - 41186 CAAAATATCTGGATTTTGATGTAACAGAATAC--AAAGATAATTACATTTGAT-TTTTAGGTCAACA-AATATGAC--AAGTCATAACAGTAAAATATTTGACATGG--ATTTGGAAATAAAAGCAAGTTTGTTCATTTACATTTTATTTAAGAGCTGTGCCCAGTTTTATCCTGTCACAAGAATGA i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 2888213 181 - 123690457 CAAAATATCTGGATTTTGATGTGACAGAATAC--AAAGATAATTACATTTGAT-ATTTAGGTCAACA-AATATGACTAAAGTCACAACAGTAAAATATTTTAAATGG--ATTTGGAAATAAAAGAAAGTTTGTTCATTTATATTTTATTTAAGAGCTGTGCCCAGTTTTATCGTGTCACAAGAATGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179826312 181 - 180051392 CAAAATATCTGGATTTTGATGTAACAGAATAC--AAAGATTATTACATTTGAT-TTTTAGGTCAACA-AATATGACTAAAGTCATAATAGTAAAATATTTTAAATGG--ATTTGGAAATAAAAGAAAGTTTGTTCATTTGTATTTTATTTAAGAGCTGTGCCCAGTTTTATCATCTCACAAGAATGA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 51515 181 + 100774 CAAAATATCTGGATTTTGATGTAACAGAATAC--AAAGATTATTACATTTGAT-TTTTAGGTCAACA-AATATGACTAAAGTCATAATAGTAAAATATTTTAAATGG--ATTTGGAAATAAAAGAAAGTTTGTTCATTTGTATTTTATTTAAGAGCTGTGCCCAGTTTTATCATCTCACAAGAATGA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 10873 181 - 218577 CAAAATATCTGGATTTTGATGTAACAGAATAC--AAAGATTATTACATTTGAT-TTTTAGGTCAACA-AATATGACTAAAGTCATAATAGTAAAATATTTTAAATGG--ATTTGGAAATAAAAGAAAGTTTGTTCATTTGTATTTTATTTAAGAGCTGTGCCCAGTTTTATCATCTCACAAGAATGA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 46776 181 + 74206 CAAAATATCTGGATTTTGATGTAACAGAATAC--AAAGATTATTACATTTGAT-TTTTAGGTCAACA-AATATGACTAAAGTCATAATAGTAAAATATTTTAAATGG--ATTTGGAAATAAAAGAAAGTTTGTTCATTTGTATTTTATTTAAGAGCTGTGCCCAGTTTTATCATCTCACAAGAATGA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204147415 182 + 204313951 CAAAATCTCTGGATTTTGATGTAACAGAATGC--AAAGATAATTCCATTTGATATTTTAGGTCAACA-AATATGACTAAAGTCATGACGGTAAAATATTTTAAGTGG--ATGTGGAAATAAAAGAAAGTTTGTTCATCTATGTTTTATTTTAGGGCTGTGTCCAGTTTTATGGTCTCACAAGAATGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16289661 180 + 16417988 CAAAATATCTGGATTTTGATGTAACAGAATGC--AAAGATAATTACATTTGATATTTTAGGTCAACA-AATATGACCAAAGTCATAACAGTAAAATATTTTAAGTGG--ATTTGGAAATAAAAG--AGTCTGTTCATCTATGTTTTATTTTAGAGCTGTGTCCAGTTTTATGGTGTCACAAGAATGA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 75713 182 - 306014 CAAAATATCTGGATTTTGATGTAACAGAATGC--AAAGATAATTACATTTGATATTTTAGGTCAACA-AATATGACTAAAGTCACAACAGTAAAATATTTTAAGTGG--ATTTGGAAATAAAAGAAAGTCTGTTCATCTAAGTTTTATTTTAGAGCTGTGTCCAGTTTTCTGGTGTCACAGGAATGA i cebCap1.NW_016108150v1 I 595 C 0 s aotNan1.NW_018494784v1 120741 181 - 211231 CAAAGTATCTGGCCTTTGATGTAACAGAATGC--AAAGATAGTTACATGTGATATTTTAGGTCAACA-AATATGACTAAAGTCCTAACAGTAAAATATTTTAAGTGG--ATTTGGAAATAAAAGAAAGTTTGTTCATCTGTGTTTTATTTTAGAGCT-TGTCCAGTTTCATGGTCTCACAAGAATGA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2108608 180 - 2165740 CAAAATATCTAGATTTTAATGTAACAGAATAT-----GATAATCACCCTTGATATTTCAGGCCAACA-AATATGCCTAAAGTCA-AACAGTACAATATTTTAAATGGATATTTGGAAATAAAAGAAAGTTTATTCATTTATGCTTCATTTAAGAATTGGGCCCAGTCTTATCATTTCACAAGAAGGA i otoGar3.GL873745 C 0 I 297 s mm10.chr13 74322748 158 + 120421639 --------------TGTGCTGCAGCTAGACAGCGGAAGAAAATTATATTTGCTGTTTCAGACCAATA-GATAGAACTAAAATC-CACTACTACATGGTTTT--------ATTTGGAAATAAAAGA----TTGCTCATTTGTACTTCACTTAAGAATTATG-CCAGTTTTATCACTGCACAAGAATAA i mm10.chr13 C 0 C 0 s canFam3.chr34 11935603 144 + 42124431 CAAAATTTCTGGATATTGAT-----------C----------------------TTTCAGGTCAACA--ACATGCCTCAAGTCA-AATAGTACAAGTTCTTAAATGG--ACTTGGAAATAGAAG-----TTTGTAATTTATGCTTTATTTAAGAATCATGCCCAGTTTTATTATTTCACAAGGATGA i canFam3.chr34 C 0 I 3 s dasNov3.JH577625 349432 144 - 913073 CAAAGTTTCCGGGTTTTGTTGTAAAAGAAT----GAAGAT--CCATAGTTGCTAATTCAGGTCAATAAAATATGCTGAAGATCA---------AACATT---AATGG--ACTTGGAAATAAGAG----TTCATTTGTTTATGTTTTATTT-------------------ATCATTTCATAAGAATGA i dasNov3.JH577625 C 0 C 0 e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C a score=2824528.000000 s hg38.chr3_KI270934v1_alt 106880 341 + 163458 AGCAAGGGACAAAGG-TAAGTGCCA--CGCTC--------------------------CCCGGCCACTGGGT-GCCAATCCCCCTTC--AATG-TACTCCTTCTTCCCCAGAGTGCAGAAGCGTATAAAGACAGTTATGACATTGACACATGCATGAGCTATTATACATAATTACAAAAGCTGATTCTGTCATCACCACATCTTGTCTCATCAGTAGGAGTGAATGGCTGGGGGGACAGTGGCACAGTCAGCCTCGTTCAAAGTTTTGTCAATTATGGGTCTATATTCCACAGTGACCTTGAAAAGA-----AGTCAGTGG-TAAGTTAA-----GCACAAAAATGTACAAAAAGCCATCTCTTGTGTTC----CTTTTGAAAAATTTT s panTro5.chr3 2577145 341 - 202621043 AGCAAGGGACAAAGG-TAAGTGTCA--CGCTC--------------------------CCCGGCCACTGGGT-GCCAATCCCCCTTC--AATG-TACTCCTTCTTCCCCAGAGTGCAGAAGCGTATAAAGACAGTTATGACATGGACACATGTATGAGCTATTATACGTAATTACAAAAGCTGATTCTGTCATCACCGCATCTTGTCTCATCAGTAGGAGCGAATGGCTGGGGGGACGGTGGCACAGTCAGCCTCGTTCAAAGTTTTGTCGATTATGGGTCTATATTCCAGAGTGACCTTGAAAAGA-----AGTCAGTGG-TAAGTTAA-----GCACAAAAATGTACAAAAAGCCATCTCTTGTGTTC----CTTTTAAAAAATTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 164375 341 - 190779 AGCAAGGGACAAAGG-TAAGTGCCA--CGCTC--------------------------CCCGGCCACTGGGT-GCCAATCCCCCTTC--AATG-TACTCCTTCTTCCCCAGAGTGCAGAAGCGTATAAAGACAGTTATGACATGGACACATGCATGAGCTATTATAGGTAATTACAAAAGCTGATTCTGTCATCACCGCATCTTGTCTCATCAGTAGGAGTGAATGGCTGGGGGGACGGTGGCACAGTCAGCCTCGTTCAAAGTTTTGTCGATTATGGGTCTATATTCCAGAGTGACCTTGAAAAGA-----AGTCAGTGG-TAAGTTAA-----GCACAAAAATGTACAAAAAGCCATCTCTTGTGTTC----CTTTTGACAAATTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 12205 340 - 41186 AGCAAGGGACAAAGG-TAAGTGCCA--CGCTC--------------------------CCCGGCCACTGGGT-GCCAATCCCCCTTC--AATG-TACTCCTTCTTCCCCAGAGTGCAGAAGCGTATGAAGACAGTTATGACATGGACACATGCAGGAGCTATTATACGTAATTACAAAAGCTGATTCTGTCATCACCGCATCTTGTCTCATCAGTAGGAGTGAATGGCT-GGGGGACGGTGGCACAGTCAGCCTCGTTCAAAGTTTTGTCGATTACGGGTCTATATTCCAGAGTGACCTTGAAAAGA-----AGTCAGTGG-TAAGTTAA-----GCACAAAAATGTACAAAAAGCCGTCTCTTGTGTTC----CTTTTGAAAAATTTT i gorGor5.CYUI01002752v1 C 0 N 0 s nomLeu3.chr11 2888394 369 - 123690457 AGCAAGGGACAAAGG-TAAGTGCCA--CGCTCCCTAGCCACTGGGTTCCTGGCAAGCTCCCGGACACTGGGT-GCCAATCTCCCTTC--AATG-TACTCCTTCTTCCCTGGAGTGCAGAAGCGTATAAAGACAGTTATGACATGGACACATGCATGAACTATTACACATAATTACAAAAGCTGATTCTGTCATCACCGCATCTTGTCTCATCAGTAGGAGCGAATGGCTGGGGGGACGGTGGCACAGTCAGCCTCGTTCAAAGTTTTGTCAATTATGGGTCTATATTCCAGAGTGACCTTGAAAAGA---AGAGTCAGTGG-TAAGTTAA-----GCACAAAAATGTACAAAAAGCCATCTCTTGTGTTC----CTTTTGAAAAATTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179826493 364 - 180051392 AGCAAGGGACAAAGG-TAAGTGCCA--CGTTCCCTGGCCACTGGGTTCCTGGCAAGCTACCAGCCACTGGGT-GCCAATCTCCCTTC--AATG-TACTCCTTTTTCCCCGGAGTGCAGAAGCGTATAAAGGCAGTTATGACATGGACACATGCATGAGCTATTATACATAATTACAAAAGCTGATTCTGTTATCACTGCATCTTGTCTCATCAGTAGGAGCGAATGGCTGGGGGGACGGTGGCACAGTCAGCCTCGTTCAAAGTTTTGTCGATTACGGGTCTATATTCCAGAGTGACCTTGAAAAGA---AGAATCAGTGG------TAA-----GCATAAAAATGTACAAAAAGCCATCTCATGTATTC----CTTTTGAAAAATTTA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 51696 364 + 100774 AGCAAGGGACAAAGG-TAAGTGCCA--CGTTCCCTGGCCACTGGGTTCCTGGCAAGCTACCAGCCACTGGGT-GCCAATCTCCCTTC--AATG-TACTCCTTTTTCCCCGGAGTGCAGAAGCGTATAAAGGCAGTTATGACATGGACACATGCATGAGCTATTATACATAATTACAAAAGCTGATTCTGTTATCACTGCATCTTGTCTCATCAGTAGGAGCGAATGGCTGGGGGGACGGTGGCACAGTCAGCCTCGTTCAAAGTTTTGTCGATTACAGGTCTATATTCCAGAGTGACCTTGAAAAGA---AGAATCAGTGG------TAA-----GCATAAAAATGTACAAAAAGCCATCTCATGTATTC----CTTTTGAAAAATTTA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 11054 364 - 218577 AGCAAGGGACAAAGG-TAAGTGCCA--CGTTCCCTGGCCACTGGGTTCCTGGCAAGCTACCAGCCACTGGGT-GCCAATCTCCCTTC--AATG-TACTCCTTTTTCCCCGGAGTGCAGAAGCGTATAAAGGCAGTTATGACATGGACACATGCATGGGCTATTATACATAATTACAAAAGCTGATTCTGTTATCACTGCATCTTGTCTCATCAGTAGGAGCGAATGGCTGGGGGGACGGTGGCACAGTCAGCCTCGTTCAAAGTTTTGTCGATTACGGGTCTATATTCCAGAGTGACCTTGAAAAGA---ACAATCAGTGG------TAA-----GCATAAAAATGTACAAAAAGCCATCTCATGTATTC----CTTTTGAAAAATTTT i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 46957 364 + 74206 AGCAAGGGACAAAGG-TAAGTGCCA--CGTTCCTTGGCCACTGGGTTCCTGGCAAGCTACCAGCCACTGGGT-GCCAATCTCCCTTC--AATG-TACTCCTTTTTCCCCGGAGTGCAGAAGCGTATAAAGGCAGTTATGACATGGACACATGCATGGGCTATTATACATAATTACAAAAGCTGATTCTGTTATCACTGCATCTTGTCTCATCAGTAGGAGCGAATGGCTGGGGGGACGGTGGCACAGTCAGCCTCGTTCAAAGTTTTGTCGATTACGGGTCTATATTCCAGAGTGACCTTGAAAAGA---ACAATCAGTGG------TAA-----GCATAAAAATGTACAAAAAGCCATCTCATGTATTC----CTTTTGAAAAATTTT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204147597 354 + 204313951 AGGGAGGGACAAAGG-TAAGTGCTG--CGGTCCCTGGCC---------------GGCTCCCGGCCACTGGGT-GCCCATCTCCCTTC--AATG-GACTCCCTCTTCACCCCAGTGCAGAAGCTTATAAAGACAGTTACGACATGAACACATGCATGAGCTATGATACATAATTACAAAGGCTGCTTCTGTCATCACCGCATCTTGTCTCATCAGTAGGAGCGAATGGCCGGGGGAACGGAGGTGCAGTCAGCCTCGTTCAAAGTTTTGTCGATTACAGGTCTATATTCCAAAGTGACCTTGAAAAGA---AGGGTCAGCGG-TAAGTTAA-----GCACAAAAATGTACAAATAGCCATCTCTTGTGTTC----CTTTTGAAAATTTTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16289841 359 + 16417988 AGGGAGGGGCAAAGA-TAAGTGCTG--CAGGCCCTGGCCACTGGGTTCCT----GGCACCCGGCCGCTGGGT-GCCAATCTCCCTTC--AGTG-GACTCCTTCTTCACCAGAGTGCAGAAGCTTATAAAGACAGTTATGACATGAA------CATGAGCTATGATACATAATTACAAAAGCTGCTTCTGTCATCAATGCGTCTTGTCTCATCAGTAGGAGCGGATGGCTGGGGGGACGGTGGTGCAGTCAGCCTCGTTCAAAGTTTTGTCGATTACAGGTCTATATTCCAGAGTGACCTTGAAAAGA---AGGGTCAGTGG-TAAGGTAA-----GCACAAAAATGTACAAAAAGCCATCTCTCGTGTTC----CTTTTGAAAATTTTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 75895 369 - 306014 AGGGAGGGACCAAGA-TAAGTGCTG--CGGTCCCTGGCCACTGGGTTCCTGGCAGGCTCCTGGCCGCTGAGT-GCCAATCTCCCTTC--AATG-GACTCCTCTTTCACCAGAGTGCAGAAGCTCATAAAGACAGTTATGACATGAACACGTGCATGAGCTATGATACATAATTACAAAAGCTGCTTCTGTCATCACCGCATCTTGTCTCATCAGTAAGAGCGAATGGCTGGGGGGACGGTGGTGCAGTCAGCCTCGTTCAAAGTTTTGTCGATTACAGGTCTATATTCCAGAGTGACCTTGAAAAGA---AGGGTCAGTGG-TAAGTTAA-----GCACAAAAATGTACAAAAAGCCATCTCTTGTGTTC----CTTTTGAAAAATTTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 120922 370 - 211231 AGGGAGGGACAAAGG-TAAGTGCTG--CCGTCCCTGGCCACTGGGATCCTGGCCAGCTCCTGGCCACTGGGT-GCCAATCTCCCTTC--AATG-GACTCCTTCTTCACCAGAGTGCAGAAGCTTATAAAGACAGTTACGACATGAACACGTGCACGAGCTATGATACATAATTACAAAAGCTGCTTCTGTCATCACCGCATCTTGTCTCATCAGTAGGAGCGAATGGCGGGGGGGACGCTGGTGCAGTCAGCCTCGTTCAAAGTTCTGTCGATTACAGGTCTATATTCCAGAGTGACCTTGAAAAGA---AGGGTCAGTGGTTAAGTTAA-----GCACAAAAATGTACAAAAAGCCATCTCCTGTGTTC----CTTTTGAAAAACGTT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2109085 341 - 2165740 AGCAAGGGATAAAGC-TAACTCCAG--CATTC--------------------------CTTGGGTGCTGGGT-TGAAAACTGCTTTTCAAATG-TACTCACTATTCCCTCAAGTGCAGCATTTTATAAAGGTAGCTGTGACATAAACATGTGTGTAAGCTATTATACATAATTACAAAAGCAGATTCCGTGATCAATGAATTTCCTCTCATCAATAGGAACGAATGGCCGGTGGAACAGTGGCACAATCAGCTTCATTCAAAGTTTTGTCAATTACAGGTCTATATTCCAGAGTGACCTTAAAAAAAAAAAGAATTAGTGG------TAA-----GT-----AATGCACAAATTGCCATCTCCTGTGTTATTTGCTTTTGAAAAAACT- i otoGar3.GL873745 I 297 C 0 s mm10.chr13 74322906 344 + 120421639 ----AGAGACAAAGT-CTGGCGCAACTCAATCCCTTACAGCAAG----------TACTACCAAGCTGTTGAT-CACAATCTA---TG--AAGT-GACTCCTTGTTCAT--GAGAGCAGAATTTTACCAAGACAAGTATGA-GGGGAAACGCAGGTAAGCTATGCTATATAATCACATAAGCTGGTCCTGTAGCT-----GTCAGGTTTCATCAGTAGGAGCGGATAGCAGGAGGTACGGTGGCACAGTCAGCCTCATTCAAGGTCTTGTCGATAACAGGTCTGTACTCCAAAGTAACCTTGGAGAAA---AGAGTCGGGGT-GAATCAAG-----GCATGAATATTTACAAACAGCCATTTCTTCTGTG-----CTTCTGTAAAATTA- i mm10.chr13 C 0 C 0 s canFam3.chr34 11935750 362 + 42124431 AGCAAAAGGTAAGCT-TCATT--CA--CACTTCCTGGCTGTTGA-TTACTAGCAAGCTTCTGGCTACCGGGTAGATGATCTCTATTCC-AATGACACTCCTTATTCACTTGAGTACAGGATTTTAAAAAGGTAATTAGGATATGAACACACGCATGAGCTATTATACATAATTACAAAAGCTG-----GTCAAC------TCTGGTCTCATCAGTAGGAGCGAATGGCTGGAGGGACCGTGGCACAGTCAGCCTCATTTAAAGTTCTGTCGATCACAGGTCTATATTCCAATGAGACCTTAAAAAGA---AGAATCTACAG-TAAGTTAAAATTTGTGGAAAAACATAAAAACAGTATTCGCTTGTATAT----TTTTTGAAAAATTC- i canFam3.chr34 I 3 C 0 s dasNov3.JH577625 349576 300 - 913073 AGCAAAGGACAAAAGTTAAGCTTAG--TGCTTCCTGGCCTTTGG------------------ATCACTGGCT-GA----------AC--AATG---CTCCTCATTCACTGGAG-ACAGGACTT-----------------CAGAGACCCATTTTTGGGCCATCATAAAGCGTAACAGAAGCTGTTTTTAT-----ACACATGGGGCTTCATCAGTAGGCGCGGATAGCAGGTGGGATAGTGGCACAGTCCGTCTCGTTCAAAGTTTTGTCGATTACGGGCCTGTAATCCAGAGTGACCTTGAAAAGA---AAAGTTAGTCT------TAA-----GAA--------TACCAACAGCCATCCC--ATGTTG----CTTTTTAAAAATT-- i dasNov3.JH577625 C 0 C 0 e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C a score=59417.000000 s hg38.chr3_KI270934v1_alt 107221 6 + 163458 AACTAT s panTro5.chr3 2577486 6 - 202621043 AACTAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 164716 6 - 190779 AACTAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 0 6 + 880730 AACTAT i gorGor5.CYUI01015759v1 N 0 C 0 s nomLeu3.chr11 2888763 6 - 123690457 AACTAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179826857 6 - 180051392 AACTAT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52060 6 + 100774 AACTAT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 11418 6 - 218577 AACTAT i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 47321 6 + 74206 AACTAT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204147951 6 + 204313951 AACTAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16290200 6 + 16417988 AACTAT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 76264 6 - 306014 AACTAT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 121292 6 - 211231 AACTAT i aotNan1.NW_018494784v1 C 0 I 460 s mm10.chr13 74323250 6 + 120421639 GGCCAT i mm10.chr13 C 0 I 1 s canFam3.chr34 11936112 5 + 42124431 -ACTAT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 349876 6 - 913073 AACTAT i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 2109426 0 - 2165740 C e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C a score=9555.000000 s hg38.chr3_KI270934v1_alt 107227 1 + 163458 A s panTro5.chr3 2577492 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 164722 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 6 1 + 880730 A i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2888769 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179826863 1 - 180051392 A i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52066 1 + 100774 A i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 11424 1 - 218577 A i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 47327 1 + 74206 A i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204147957 1 + 204313951 A i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16290206 1 + 16417988 A i saiBol1.JH378155 C 0 I 2205 s cebCap1.NW_016108150v1 76270 1 - 306014 A i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 121758 1 - 211231 a i aotNan1.NW_018494784v1 I 460 C 0 s canFam3.chr34 11936117 1 + 42124431 A i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 349882 1 - 913073 A i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74323256 1 + 120421639 I e otoGar3.GL873745 2109426 0 - 2165740 C e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C a score=8281.000000 s hg38.chr3_KI270934v1_alt 107228 1 + 163458 A s panTro5.chr3 2577493 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 164723 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7 1 + 880730 A i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2888770 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179826864 1 - 180051392 A i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52067 1 + 100774 A i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 11425 1 - 218577 A i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 47328 1 + 74206 A i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204147958 1 + 204313951 A i calJac3.chr2 C 0 I 720 s cebCap1.NW_016108150v1 76271 1 - 306014 A i cebCap1.NW_016108150v1 C 0 I 466 s aotNan1.NW_018494784v1 121759 1 - 211231 a i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 11936118 1 + 42124431 A i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 349883 1 - 913073 A i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74323256 1 + 120421639 I e saiBol1.JH378155 16290207 2205 + 16417988 I e otoGar3.GL873745 2109426 0 - 2165740 C e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C a score=7098.000000 s hg38.chr3_KI270934v1_alt 107229 1 + 163458 A s panTro5.chr3 2577494 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 164724 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 8 1 + 880730 A i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2888771 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179826865 1 - 180051392 A i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52068 1 + 100774 A i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 11426 1 - 218577 A i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 47329 1 + 74206 A i manLeu1.NW_012101728v1 C 0 C 0 s aotNan1.NW_018494784v1 121760 1 - 211231 a i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74323257 1 + 120421639 A i mm10.chr13 I 1 C 0 s canFam3.chr34 11936119 1 + 42124431 A i canFam3.chr34 C 0 I 7 s dasNov3.JH577625 349884 1 - 913073 A i dasNov3.JH577625 C 0 C 0 e saiBol1.JH378155 16290207 2205 + 16417988 I e calJac3.chr2 204147959 720 + 204313951 I e cebCap1.NW_016108150v1 76272 466 - 306014 I e otoGar3.GL873745 2109426 0 - 2165740 C e colAng1.NW_012116910v1 783431 1631 - 1687011 I e chlSab2.chr4 1382360 0 + 91010382 C e macFas5.chr6 1288236 0 + 181584905 C a score=196147.000000 s hg38.chr3_KI270934v1_alt 107230 31 + 163458 AGTAGATTTAC-GG-----C-ATG-TGAACTTTaaggta------ s panTro5.chr3 2577495 31 - 202621043 AGTAGATTTAC-GG-----C-ATG-TGAACTTTAAGGTA------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 164725 31 - 190779 AGTAGATTGAC-GG-----C-ATG-TGAACTTTAAGGTA------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9 31 + 880730 AGTAGATTTAC-GG-----C-ATG-TGAACTTTAAGGTA------ i gorGor5.CYUI01015759v1 C 0 I 1 s nomLeu3.chr11 2888772 31 - 123690457 AGTAGATTTAC-GG-----C-ATG-TGAACTTTaaggta------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179826866 31 - 180051392 AGTAGATTAAT-GG-----C-ATG-GGAACTTAAAAGTA------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1288236 31 + 181584905 AGTAGATTTAC-GG-----C-CTG-GGAACTTAAAGGTA------ i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 52069 31 + 100774 AGTAGATTAAT-GG-----C-ATG-GGAACTTTAAAGTA------ i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 11427 31 - 218577 AGTAGATTAAT-GG-----C-ATG-GGAACTTAAAGGTA------ i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1382360 31 + 91010382 AGTAGATTTAT-GG-----C-CTG-GGAACTTAAAGGTA------ i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 47330 31 + 74206 AGTAGATTAAT-GG-----C-ATG-GGAACTTAAAGGTA------ i manLeu1.NW_012101728v1 C 0 C 0 s aotNan1.NW_018494784v1 121761 31 - 211231 aaTAGATTTAT-GG-----C-ATG-GGAACTTAAAGGTA------ i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2109426 30 - 2165740 --TAGATTTAC-AG-----CTGTG-GGAACTTAAAGGTA------ i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74323258 32 + 120421639 AGTACATTTACAGG-----C-ATG-AGAACTTTAAGACA------ i mm10.chr13 C 0 I 262 s canFam3.chr34 11936127 29 + 42124431 TGTAGACAAAT-TT-----C-A---GGAACTTAAAATCa------ i canFam3.chr34 I 7 I 6 s dasNov3.JH577625 349885 43 - 913073 AGCAGATTTTC-AGATATAC-ATGCAGAACTTAAAAGACAAGGCA i dasNov3.JH577625 C 0 C 0 e saiBol1.JH378155 16290207 2205 + 16417988 I e calJac3.chr2 204147959 720 + 204313951 I e cebCap1.NW_016108150v1 76272 466 - 306014 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I a score=203282.000000 s hg38.chr3_KI270934v1_alt 107261 29 + 163458 tttgctgc--agtattttccaataac--aaatt s panTro5.chr3 2577526 29 - 202621043 TTTGCTGC--AGTATTTTCCAATAAC--AAATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 164756 29 - 190779 TTTGCTGC--AGTATTTTCCAATAAC--AAATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 41 31 + 880730 TTTGCTGCCAGTTATTTCCCAATAAC--AAATT i gorGor5.CYUI01015759v1 I 1 C 0 s nomLeu3.chr11 2888803 29 - 123690457 tttgctgc--agtattttccagtaac--aaatt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179826897 29 - 180051392 TTTGCCGC--AGTCTTTTCCAATAAC--AAATT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1288267 29 + 181584905 TTTGCCGC--AGTCTTTTCCGATAAC--AAATT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 52100 29 + 100774 TTTGCCGC--AGTCTTTTCCAATAAC--AAATT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 11458 29 - 218577 TTTGCTGC--AGTCTTTTCCAATAAC--AAATT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1382391 29 + 91010382 TTTGCCGC--AGTCTTTTCCAATAAC--AAATT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 47361 29 + 74206 TTTGCTGC--AGTCTTTTCCAATAAC--AAATT i manLeu1.NW_012101728v1 C 0 C 0 s aotNan1.NW_018494784v1 121792 29 - 211231 TTTGCTGC--AGTATTTTTCAATAAC--AAATT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2109456 29 - 2165740 TTCACTGG--AGTATTTTTCAGTAAC--AAAGT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11936162 31 + 42124431 ctcattgtggagtatttttcagtaac--aaact i canFam3.chr34 I 6 C 0 s dasNov3.JH577625 349928 31 - 913073 TTCACTGG--GGTATTTTTCAGTAACAGAAACT i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e saiBol1.JH378155 16290207 2205 + 16417988 I e calJac3.chr2 204147959 720 + 204313951 I e cebCap1.NW_016108150v1 76272 466 - 306014 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I a score=588598.000000 s hg38.chr3_KI270934v1_alt 107290 101 + 163458 c-aaaaatgat-cta-catgc-gcaaca--ggggac------tgtaaatg-acggcagatcggtagagtggaa--cagag-caac-gaaaatgacactgtaccagattct-cagtgctt----- s panTro5.chr3 2577555 97 - 202621043 C-AAAAATGAT-CTA-CATGC-GCAACA-GGGGGAC------TGTAAGTG-ACGGCAGATCTGTAGAGTGGAA--CAGAG-CAAT-GAAAATGACACTGTACCAGATTCT-CAG---------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 164785 96 - 190779 C-AAAAATGAT-CTA-CATGC-GCAACA--GGGGAC------TGTAAATG-ACGGCAGATCGGTAGAGTGGAA--CACAG-CAAC-GAAAATGACACTGTACCAGATTCT-CAG---------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 72 103 + 880730 CAAAAAATGAT-CTA-CATGCTGCAACA--GGGGAC------TGTAAATGCACGGCAGATCGGTAGAGTGGAAACCAGAG-CAACAGAAAATGACACTGTACCAGATTCTCCAG---------- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2888832 95 - 123690457 c-aaaaatgat-cta-catgc-gcaaca--ggggag------tgtcaatg-atggcagatccacaga-tggaa--cagag-caac-gaaaatgacactgtaccagattct-cag---------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179826926 96 - 180051392 C-AAAAATGAT-CTA-CATGC-GCAACA--GGGGAC------TGTAAATG-GCGGCAGATCCGTAGAGTGGAA--CAGAGCCAAC-G-AAATGACCCTGTGCCAGATTCT-CAG---------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1288296 95 + 181584905 C-AACAATGTT-CCA-CATGC-GCAACA--GGGGAC------TGTAAATG-GCGGCAGATCCCTAGAGTGGAA--CAGAG-CGAC-G-AAATGACCCTGTGCCAGATTCT-CAG---------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 52129 95 + 100774 C-AAAAATGAT-CTA-CATGC-GCAACA--GGGGAC------TGTAAATG-GCGGCAGATCCGTAGAGTGGAA--CAGAG-CGAC-G-AAATGACCCTGTGCCAGATTCT-CAG---------- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 11487 95 - 218577 C-GAAAATGAT-CTA-CATGC-ACAACA--GGGGAC------TGTAAATG-GCGGCAGATCCCTAGAGTGGAA--CAGAG-CGAC-G-AAATGACCCTGTGCCAGATTCT-CAG---------- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1382420 95 + 91010382 C-AAAAATGAT-CTA-CATGC-GCAACA--GGGGAC------TGTAAATG-GCGGCAGATCCGTAGAGTGGAA--CAGAG-CGAC-G-AAATGACCCTGTGCCAGATTCT-CAG---------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 47390 95 + 74206 C-GAAAATAAT-CTA-CATGC-GCAACA--GGGGAC------TGTAAATG-GCGGCAGATCCCTAGAGTGGAA--CAGAG-CGAC-G-AAATGACCCTGTGCCAGATTCT-CAG---------- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204148679 100 + 204313951 C-GAAAATGACACTGTCATGC-ACGACG--GGGGACC----GTGTCAATA-AGGACAAGTCTGCAGGGTGGAA--CACAG-CCCC-GAAAATGACACTGTGCAAGAGTCT-CAG---------- i calJac3.chr2 I 720 I 5 s aotNan1.NW_018494784v1 121821 98 - 211231 C-AAAAATGAT-CTA-CATGC-ACCACG--GGGGACC----GTGTAAATG-AGGGTGAATCCGCAGAGTGGAA--CAGAG-CCAC-GAAAATGACATTGTGCAAGAGTCT-CAG---------- i aotNan1.NW_018494784v1 C 0 I 5 s otoGar3.GL873745 2109485 98 - 2165740 -AGAAAATGAT-CTA-CATGC-GCAACA--GGGAACC----ATGTAAATG-ATGACAACTCTGTATAGTAGAG--CAGAG-TAAT-TAAAATGATACAGTGTAAGATTCT-AAA---------- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11936193 102 + 42124431 c-aaaaatgac-cta-aacgt-acaata--ggggaccaggtatgtaaatt-atggtaactccatgtaatgaaa--tacag-caac-taaaataacaatgtataaaattct-tga---------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 349959 93 - 913073 -TGAAAGGGAC-CTG-AATGT-GCAACACTGGGGCC---------------AGGACAAATCCTTGCAGTGGAG--GAGAG-CCCT-TAAAACAGCACTGTACAAGA--CT-CAA-----CACTT i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e saiBol1.JH378155 16290207 2205 + 16417988 I e cebCap1.NW_016108150v1 76272 466 - 306014 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I a score=78643.000000 s hg38.chr3_KI270934v1_alt 107391 10 + 163458 tgctttacaa s panTro5.chr3 2577652 10 - 202621043 TGCTTTACAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 164881 10 - 190779 TGCTTTACAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 175 10 + 880730 TGCTTTACAA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2888927 10 - 123690457 tgctttacaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179827022 10 - 180051392 TGCTTTACAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1288391 10 + 181584905 TGCTTTACAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 52224 10 + 100774 TGCTTTACAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 11582 10 - 218577 TGCTTTACAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1382515 9 + 91010382 TGCTTTAC-A i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 47485 9 + 74206 TGCTTTAC-A i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204148784 5 + 204313951 -----TACAA i calJac3.chr2 I 5 C 0 s cebCap1.NW_016108150v1 76738 10 - 306014 TGCTTTACAA i cebCap1.NW_016108150v1 I 466 C 0 s aotNan1.NW_018494784v1 121924 5 - 211231 -----TACAA i aotNan1.NW_018494784v1 I 5 C 0 s otoGar3.GL873745 2109583 10 - 2165740 TGTTTTACAA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11936295 10 + 42124431 tgctttacac i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 350052 10 - 913073 TATTTcaaaa i dasNov3.JH577625 C 0 I 125 e mm10.chr13 74323290 262 + 120421639 I e saiBol1.JH378155 16290207 2205 + 16417988 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I a score=650447.000000 s hg38.chr3_KI270934v1_alt 107401 106 + 163458 aaatgctcccatcatgaaaagtgggag-aacccttgtct-ataccaagacact----tcatgtttaaactatctac--ttcc----agtttttct--acttcaaagtaaatatttatata s panTro5.chr3 2577662 106 - 202621043 AAATGCTCCCATCATGAAAAGTGGGAG-AACCCTTGTCT-ATACCAAGACACT----TCATGTTTAAACTATCTAC--TTCC----AGTTTTTCT--ACTTCAAAGTAAATATTTATATa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 164891 106 - 190779 AAATGCTCCCATCATGAAAAGTGGGAG-AACCCTTGTCT-ATACCAAGACACT----TCATGTTTAAACTATCTAC--TTCC----AGTTTTTCT--ACTTCAAAGTAAATATTTATATa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 185 112 + 880730 AAAATGCTCCGTCATGAAAAGTGGGAGAAACCCTTGTCTAATACCAACACACT----TGATATTCAAACCATCTACCTTCCC----AGTTTTCTCTAACTTCAAAGTAAATATTTATATA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2888937 106 - 123690457 aaatgctcccgtcatgtagagtgggag-aacccttgtct-ataccaagacact----tcatgtttaaactatctac--ttcc----agttcttcc--acttcaaagtaaatatttatata i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179827032 92 - 180051392 AAATGCTCCCGTCATGAAAAGTGGGAG-AACCCTTGTCT-ATACCAAGACACT----TTAT-----AACTATCTAC--TTCC---------------AGTTCAAAGTAAATATTTACATa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1288401 97 + 181584905 AAATGCTCCCGTCATGAAAAGTGGGAG-AACCCTTGTCT-ATACCGAGACACT----GTATGTTTAAACTACCTAC--TTCC---------------AGTTCAAAGTAAATATTTACATa i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 52234 92 + 100774 AAATGCTCCCGTCATGAAAAGTGGGAG-AACCCTTGTCT-ATACCAAGACACT----TTAT-----AACTACCTAC--TTCC---------------AGTTCAAAGTAAATATTTACATa i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 11592 97 - 218577 AAATGCTCCCGTCATGAAAAGTGGGAG-AACCCTTGTCT-ATACCGAGACACT----GTATGTTTAAACTACCTAC--TTCC---------------AGTTCAAAGTAAATATTTACATa i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1382524 97 + 91010382 AAAATGCTCGGTCATGAAAAGTGGGAG-AACCCTTGTCT-ATACCGAGACACT----GTATGTTTAAACTACCTAC--TTCC---------------AGTTCAAAGTAAATATTTACATa i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 47494 97 + 74206 AAATGCTCCCATCATGAAAAGTGGGAG-AACCCTTGTCT-ATACCGAGACACT----GTATGTTTAAACTACCTAC--TTCC---------------AGTTCAAAGTAAATATTTACATa i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204148789 106 + 204313951 AAATGCTCCCATCATGAAAAGTGGGAG-AACCCTCGTAT-ATACCAAAACACT----TTATGTTCAAGCTATCTAC--TTCC----AGTTTTTCT--ACTTCAAAGTAAATATTTATATa i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 76748 105 - 306014 AAATACTCCCATCATGAAAAGTGGGAG-AACCCTCGCAT-ATACCAAAACACT----TTATGTTCAAGCTATCTAC--TTCC----AGTTTTTAT--ACTTCAAAGTAAATATTT-TATa i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 121929 100 - 211231 AAATGCTCCCATCATGGAAAGTGGGAG-AACCCTCGTAT-ACACCAGAACACT----TTATGTTCAAGCTATCTAC--TTCC----AGTTT--------TTCAAAGTAAATATTTATATa i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2109593 74 - 2165740 AAATGCTCACATCACGAACAGGAGGTG-AAACC---------------ACACT----TTATGTTAAAAA-GTGTTT--TTCT---------------ACTTAAAA--------TTATTca i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11936305 95 + 42124431 aaatgctc-------aagaagtg-----aaaccttgcat-atattatcattctttaattatgcttaaaccctgtat--ttaccaaaagtttttct--attt--------gtatttatata i canFam3.chr34 C 0 I 149 e mm10.chr13 74323290 262 + 120421639 I e dasNov3.JH577625 350062 125 - 913073 I e saiBol1.JH378155 16290207 2205 + 16417988 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I a score=3402646.000000 s hg38.chr3_KI270934v1_alt 107507 476 + 163458 ggtagaacatccctaatccaaacatctgaaattctccc-aaatctgaaactttct-gagcacc-agcatg-acattcaaaagaaatgtgctatggagtcagatcttccgattaaggat-gctcagacagtaagtgtaatgcaa--atattccaaagtctgaacaagcctgaaatccaaaacacttctggtcccaaggatttcagagaaggaatactcaagccgtgtat-taaatatgcacacaca---ggaaaaggtaggcacatatac---------aaagaaa-ttt--aaaccataatggg-----tcatctctggttagtgagctcttatttcaatctctttgtactttctaaaatgagtatgtatttcttcaaaaatcactgaaaCTggctgggcgtgttggttcatgcctgttggggaggccaagacaggtggatcactt--gagctcaggagctcaagactagcctgggcaacgt-ggcaaaaccccgtctctacaaaac s panTro5.chr3 2577768 477 - 202621043 ggtagaacatccctaatccaaacatctgaaattctccc-aaatctgaaactttctagagcacc-agcatg-acattcaaaagaaatgtgctatggagtcagatcttccgattagggat-gctcagacagtaagtgtaatgcaa--atattccaaagtctgaacaagcctgaaatccaaaacacttctggtcccaaggatttcagagaaggaatactcaaGCCATGTAT-TAAATATGCACACACA---GGAAAAGGTAGGCACATATAG---------AAAGAAA-TTT--AAACCATAATGGG-----TCATCTCTGGTTAGTGAGCTCTTATTTCAATCTCTTTGTACTTTCTAAAATGAGTATGTATTTCTTGAAAAATCACTGAAACTggctgggcgtgttggttcatgcctgttggggaggccaagacaggtggatcactt--gagctcaggagctcaagactagcctgggcaacgt-ggcaaaaccccgtctctacaaaac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 164997 476 - 190779 ggtagaacattcctaatccaaacatctgaaattctccc-aaatctgaaactttct-gagcacc-agcatg-acattcaaaagaaatgtgctatggagtcagatcttccgattagggat-gctcagacagtaagtgtaatgcaa--atattccaaagtctgaacaagcctgaaatccaaaacacttctggtcccaaggatttcagagaaggaatactcaaGCCATGTAT-TAAATATGCACACACA---GGAAAAGGTAGGCACATATAC---------AAAGAAA-TTT--AAACCATAATGGG-----TCATCTCTGGTTAGTGAGCTCTTATTTCAATCTCTTTGTACTTTCTAAAATGAGTATGTATTTCTTGAAAAATCACTGAAACTggctgggcgtgttggttcatgcctgttggggaggccaagacaggtggatcactt--gagctcaggagctcaagactagcctgggcaacgt-ggcaaaaccccgtctctacaaaac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 297 485 + 880730 GCTAgaacatccctaatccaaacatctgaaatcctcccaaaatctgaaactttct-gagcaccgggcatgaacattcaaaagaaatgtgctatggagtcagatgttccgattagggatggttcagacagtaagtgtaatgcaa-tatattccaaagtctgaacaagcctaaaatccaaaacacttctggtcccaaggatttcagagaaggaatactcaaGCCGTGTAT-TAAATATGCACACACA---GGAAAAGGTAGGCACATATAC---------AAAGAAATTTT--AAACCATAATGGG-----TCATCTCTGGTTAGTGAGCTCTTATTTCAATCTCTTTGTACTTTCTAAAATGAGTATGTATTTCTTGAAAAATCACTGAAACTggctgggcgtgttgtttcatgcctgttggggaggccaagacaggtggatcactttgaggctcaggagctcaagactggcctgggcaacgtgggaaaaaccgcgtctctacaaaac i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2889043 476 - 123690457 ggttgaacatccctaatccaaacatctgaaattctccc-aaatctgaaactttct-gagcacc-aacatg-ccattcaaaagaaatgtgctatggagtcagatcttcccattagggat-gctcagacagtaagtataatgcaa--atattccaaagtctgaacaagcccgaaatccagaacgcttctggtcccaaggatttcagagaaggaatactcaagccatgtat-taaatatgcacacaca---ggaaaaggtaggcgcagatac---------aaagaaa-ttt--aaaccataatggg-----tcatctcaagttagtgagctcttatttcaatctctttgtactttctaaaatgagtatgtatttcttgaaaaatcactgaaaCTggctgggcgtgtttgttcatgcctgttggggaggccaaaacaggtggatcactt--gagctcaggagctcaagaccagcctgggcaacgt-ggcaaaaccccgtctctacaaaac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179827124 467 - 180051392 ggttgaacatccctaatacaaaaatctgaaattctcca-aaatctgaagctttct-gagcacc-aacatg-acattcaaaagaaatgtgctatggagtcagatcttccgactggggac-gctcagacagtaagtatcatgcag--atattccaaagtctgaacaagcctgaaatccgaaacacttctggtcccaaggatttcagagaaggaatactcaaGTTGTATAT-TAAATATGCACACACA---GGAAAAGGTAGGCACATATAC---------AAAGAAA-TTT--AAACCATAATGGG-----TCATCTCTGGTT-GTGAGCTCTTATTTCAATCTCTTTGTACTTTCTGAAATGAGTATGTATTTCTTGAAAAATCACTAAAACTggctgagcgtgttggttcatgcctgttggggaggtcaagacaggtggatcacta----------gagttcaagactagcctaggcaacgt-ggcgaaaccccatctctacaaaac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1288498 458 + 181584905 ggttgaacatccctaatgcaaaaatctgaaattctcca-aaatctgaagctttct-gagcacc-aacatg-acattcaaaagaaatgtgctatggagtcagatcttctgatt-gggat-gctcagacagtaagtatcatgcag--atattccaaagtctgaacaagcctgaaatccgaaacacttctggtcccaaggatttcagagaaggaa--------tTGTATAT-TAAAAATGCACACACA---GGAAAAGGTAGGCACATACAC---------AAAGAAA-TTT--AAACCATAATGGG-----TCGTCTCTGGTT-GTGAGCTCTTATTTCAATCTCTTTGTACTTTCTGAAATAAGTATGTGTTTCTTGAAAAATCACTAAAACTggctgagtgtgttggttcatgcctgttggggaggtcaagacaggtggatcacta----------gagttcaagactagcctaggcaatgt-ggcaaaaccccgtctctacaaaac i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 52326 468 + 100774 ggttgaacatccctaatacaaaaatctgaaattctcca-aaatctgaagctttct-gagcacc-aacatg-acattcaaaagaaatgtgctatggagtcagatcttccgactggggac-gctcagacagtaagtatcatgcag--atattccaaagtctgaacaagccggaaatccgaaacacttctggtcccaaggatttcagagaaggaatactcaaGTTGTGTAT-TAAATATGCACACACA---GGAAAAGGTAGGCACATATAC---------AAAGAAA-TTT--AAACCATAATGGG-----TCATATCTGGTTAGTGAGCTCTTATTTCAATCTCTTTGTACTTTCTGAAATGAGTATGTATTTCTTGAAAAATCACTAAAACTggctgagtgtgttggttcatgcctgttggggaggtcaagacaggtggatcactt----------gagttcaagactagcctaggcaacgt-ggcaaaaccccatctctacaaaac i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 11689 465 - 218577 ggttgaacatccctaatgcaaaaatctgaaattctcca-aaatctgaagctttct-gagcacc-aacatg-acattcaaaagaaatgtgctatggagtcagatcttccgact-gggac-gttcagacagtaagtatcatgcag--atattccaaagtctgaacaagcctgaaatccgaaacacttctggtcccaaggatttcagagaaggaatactcaaGTTGTGTAT-TAAATATGCACACACA---GGAAAAGGTAGGCACATACAC---------AAAGAAA-TTT--AAACCATAATGGG-----TCGTCTCTGGTT-GTGAGCTCTTATTTCAATCTCTTTGTACTTTCTGAAATAAGTATGTATTTCTTGAAAAATCACTAAAACTggctaagcgtgttggttcatgcctgttggggaggtcaagacaggtggatcactt----------gagttcaagactagcctaggcaacgt-ggcg-aaccccatctctacaaaac i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1382621 462 + 91010382 ggttgaacatccctaatccaaaaatctgaaattctcca-aaatctgaagctttct-gagcacc-aacatg-acattcaaaagaaatgtgctatggagtcagatcttccgactggggac-actcagacagtaagtatcatgcagatatattccaaagtctgaacaagcctgaaatccgaaacacttctggtcccaaggatttcagagaaggaa--------tTGTATAT-TAAAAATGCACACACA---GGAAAAGGTAGGCACACACAC---------AAAGAAA-TTT--AAACCATAATGGG-----TCGTCTCTGGTTAGTGAGCTCTTATTTCAATCTCTTTGTACTTTCTGAAATGAGTATGTATTTCTTGAAAAATCACTAAAACTggctgagcgtgttggttcatgcctgttggggaggtcaagacaggtggatcactt----------gagttcaagactagcctaggcaacgt-ggcgaaaccccatctctacaaaac i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 47591 465 + 74206 ggttgaacatccctaatgcaaaaatctgaaattctcca-aaatctgaagctttct-gagcacc-aacatg-acattcaaaagaaatgtgctatggagtcagatcttccgact-gggac-gctcagacagtaagtatcatgcag--atattccaaagtctgaacaagcctgaaatccgaaacacttctggtcccaaggatttcagagaaggaatactcaaGTTGTGTAT-TAAATATGCACACACA---GGAAAAGGTAGGCACATACAC---------AAAGAAA-TTT--AAACCATAATGGG-----TCATCTCTGGTT-GTGAGCTCTTATTTCAATCTCTCTGTACTTTCTGAAATGAGTATGTATTTCTTGAAAAATCACTAAAACTggctgagcgtgttggttcatgcctgttggggaggtcaagacaggtggatcactt----------gagttcaagactagcctaggcaacgt-ggcg-aaccccatctctacaaaac i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204148895 474 + 204313951 ggttgaacatccctaatccaaaaatctgaaattctcca-aaacttgaaactttct-gagcacc-aatatg-acattcaaaagaaatgcaccatggagtcagatcttccaattagggat-gatcagacagtaagtgtaatgcaa--atattccaaagtctgaacaagccggaaatccaaaacactgctggccccaaggatttcagat-aggaacactcaagctgTGTAC-TAAATATGCACACAGA---GTCAATGGTAGACACACACAC-------------ACA-CTC-AAAACCATAATGGGCCCTCTCCTCTCTG-TTACTGAGCTCTTATTTCAGTCTCTTTGTACTTTCTAAAATGAGTATGTATTTCTTGAAAAATCACCAAAACTAGCCAGCCATGTTGGTTCATGCCTGttggggaggccaaggcaggtggatcat----gagctcaggagttcaaaactagtctgggcaacat-ggtgaaaccgtgtctctacaaaac i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 76853 463 - 306014 ggttgaacatccttgatccaaaaatctgaaattctcca-aaacttgaaactttct-gagcacc-aatatg-acattcaaaagaaaagtgccatggagtcagatcttccaattagggat-ggtgagacagtaagtataatgcaa--atattccaaagtctgaacacgcctgaaatccgaaacacttctggccccagggatttcagataaggaatactcaagctgTGTAT-TAAATATGCACGCACA---GTAAAAGGTAGACACGCATAT---------AAAGAAA-CTT-AAAACCATAATGGG-----TCATCTCTGATTAGTGAGCTCTTATTTCAATCTCTTTGTACTTTCTAAAATGAGTATGTATTTCTTGAAATATCACCAAAACTAGCCAGCCA--------------TAttggggaggccaaggcaggtggatcactg--gagctcggtagttcaagactagtctgggcaacat-ggtgaaaccctgtctctacaaaac i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 122029 472 - 211231 ggttg-acatccctaatccaaaaatgtgaaattctcca-aaacttgaaactttct-gagcacc-aatatg-acattcaaaagaaatgcgccacggagtcagaccttccaattagggat-ggtcagacagtaggtacaatgcaa--ctattccaaagtctgaacaagcctgaaacccaaa--acttctggccccaaggatttcagataaggaatactcaagctgTGTAT-TAAATATGCACACACA---GTAAAAGGTGGACACACATAC---------AAAGAAA-CTT-GAAACCATACTGGG-----TCATCTCTGATTAGTGAGCTCTTATTTCAATCTC--TGTACTTTCTAAAATGAGTATGTATTTCTTGAAAAATCACCAAAACTCGCCAGCCATGTTGGTTCATGCCTGGTGgggaggccaaggcaggtggatcactt--gagctcaggagttcaagactagtctgggcaacat-ggtgaaaccctgtctctacaaaac i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2109667 371 - 2165740 ggtttaatatccctaatccaaaattcccaagtgctcca-aaatctgagacattct-gagtagc-aacctg-acactt-gaagaaaggctcactggagca-------cttactaggctt-ccactggt--taagtataatgcaa--atattcccaaatcgaaaaatattccaaaccggaaatacttttgatcctaaaaatttcaaagaagggatactcaaccCATATCCATAAATTTGTACACATAAATGAAAAGTGTGTACACCTACACTCAAAGCTTATAAATA-TTTCAAAACGGTAATGGG-----TTATCTCAGATTGATGGGCTTTTGTTTC-----CTTTTTACTTTGTAAAATAAGCA----TTTCTTTTATAATCAC--AAACCCCCCCAACA---------ATGC--------------------------------------------------------------------------------------------- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e dasNov3.JH577625 350062 125 - 913073 I e saiBol1.JH378155 16290207 2205 + 16417988 I e canFam3.chr34 11936400 149 + 42124431 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I a score=1094271.000000 s hg38.chr3_KI270934v1_alt 107983 162 + 163458 ata-caaaaattag-ccaggcatggtggcatgtg-cccgggaggctgaggtgggaggatcacctgagccgaggggaggttgaggctgcagtgagatgagatcgagccaccacatttcagcctgggcaaaagagatgagactctatctcagaac------aacaaaaacaaa s panTro5.chr3 2578245 162 - 202621043 ata-caaaaattag-ccaggcatggtggcatgtg-cccgggaggctgaggtgggaggatcacctgagccggggggaggttgagggtgcagtgagacgagatcgagccaccacatttcagcctgggcaaaagaggtgagactctatctcagaac------aacaaaaacaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 165473 162 - 190779 ata-caaaaattag-ccaggcatggtggcatgtg-cccgggaggctgaggtgggaggatcacctgagccggggggaggttgagggtgcagtgagacgagatcgagccaccacatttcagcctgggcaagaaagatgagactctatctcagaac------aacaaaaacaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 782 165 + 880730 ataccaaaaattagcccaggcatggtggcatgtgccccgggaggctgaggtgggaggatcacctgagccagggggaggttgaggctgcagtgagacgagatcgagccactacatttcagcctgggcaaaagagatgagactctatctcacaac------aacaaaaacaaa i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2889519 162 - 123690457 ata-caaaaattag-ccaggcatggtggcatgtg-cctgggaggctgaggtgggaggatcacctgagccggcgggaggttgaggctgcagtgagacgagatcgagccaccacatttcagcctgggcaacagagatgagactctatctcagaaa------aacaaaaacaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179827591 151 - 180051392 ata-caaaaattag-ccaggcatggtggcatgtg-cctgggaggctgaggtgggaggatcacctgagccagggggaggttgaggctacagtgagacaagatcgagccaccacatttcagcctgggcaacagagatgagactctgtctcaga-----------------aaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1288956 149 + 181584905 ata-caaaaattag-ccaggcatggtggtgtgtg-cctgggaggctgaggtgggaggatcacctgagccagggggaggttgaggctgcagtgagacaagatcgacccaccacatttcagcctgggcaacagagatgaga--ctgtctcaga-----------------aaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 52794 151 + 100774 ata-caaaaattag-ccaggcatggtggtgtgtg-cctgggaggctgaggtgggaggatcacctgagccagggggaggttgaggctacagtgagacaagatcgagccaccacatttcagcctgggcaacagagatgagactctgtctcaga-----------------aaa i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 12154 149 - 218577 ata-caaaaattag-ccaggcatggtggcgtgtg-cctgggaggctgaggtgggaggatcacctgagccagggggaggttgaggctgcagtgagacaagatcgagccaccacatttcagcctgggcaacagagatgaga--ctgtctcaga-----------------aaa i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1383083 149 + 91010382 ata-caaaaattag-ccaggcatggtggcgtgtg-cctgggaggctgaggtgggaggatcacctgagccagggggaggttgaggctacagtgagacaagatcgagccaccacatttcagcctgggcaacagggatgaga--ctgtctcaga-----------------aaa i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 48056 149 + 74206 ata-caaaaattag-ccaggcatggtggcgtgtg-cctgggaggctgaggtgggaggatcacctgagccagggggaggttgaggctgcagtgagacaagatcgagccaccacatttcagcctgggcaacagagatgaga--ctgtctcaga-----------------aaa i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204149369 158 + 204313951 ata-caaaaattag-ccaggcatggtggcacgtg-cctgggaggctgaggcaggaggatcacttgagcctgggggaggttgaggctgcagtgagatgagaccaagccactgcattccagcctgggcaacagag-tgagactctatctcag---------aaataaaacaaa i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 77316 167 - 306014 ata-caaaaattag-ccaggcatggtggcatgtg-cctgggagcctgaggtgggaggatcacctgagcctgggggaggttgaggctgcagtgagatgagaccaagccactgcattccagcctgggcaacagaa-tgagactctacctcagaaaaagcaaaaagaaaacaaa i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 122501 166 - 211231 ata-caaaaattag-ccaggcatggtggcacgtg-cctgggaggctgaggtgggaggatcacctgagcct-ggggaggttgaggctgcagtgagatgagaccaagccactgcattccagcctgggcaacagag-tgagactctatctcagaaaaaacaaaaagaaaagaaa i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e dasNov3.JH577625 350062 125 - 913073 I e saiBol1.JH378155 16290207 2205 + 16417988 I e canFam3.chr34 11936400 149 + 42124431 I e otoGar3.GL873745 2110038 0 - 2165740 C e colAng1.NW_012116910v1 783431 1631 - 1687011 I a score=83339.000000 s hg38.chr3_KI270934v1_alt 108145 12 + 163458 ac--aaaaaaCCTG s panTro5.chr3 2578407 12 - 202621043 ac--aaaaaaCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 165635 12 - 190779 ac--aaaaaaCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 947 14 + 880730 acaaaaaaaaCCTG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2889681 12 - 123690457 ac--aaaaaaCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179827742 12 - 180051392 ac--aaaaaaCCCG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1289105 12 + 181584905 ac--aaaaaaCCCG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 52945 12 + 100774 ac--aaaaaaCCCG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 12303 12 - 218577 ac--aaaaaaCCCG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1383232 12 + 91010382 ac--aaaaaaCCCG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 48205 12 + 74206 ac--aaaaaaCCCG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204149527 13 + 204313951 ac-aaaaaaaCCCA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 77483 13 - 306014 ac-aaaaaaaCCCA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 122667 13 - 211231 ac-aaaaaAACCCA i aotNan1.NW_018494784v1 C 0 C 0 s dasNov3.JH577625 350187 12 - 913073 at--aaaaaaCCCC i dasNov3.JH577625 I 125 C 0 e mm10.chr13 74323290 262 + 120421639 I e saiBol1.JH378155 16290207 2205 + 16417988 I e canFam3.chr34 11936400 149 + 42124431 I e otoGar3.GL873745 2110038 0 - 2165740 C e colAng1.NW_012116910v1 783431 1631 - 1687011 I a score=67482.000000 s hg38.chr3_KI270934v1_alt 108157 10 + 163458 AACCCGGAAA s panTro5.chr3 2578419 10 - 202621043 AACCCGGAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 165647 10 - 190779 AACCCGGAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 961 10 + 880730 AACCCGGAAA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2889693 10 - 123690457 AACCTGGAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179827754 10 - 180051392 AACCCGGAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1289117 10 + 181584905 AACCCGGAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 52957 10 + 100774 AACCCGGAAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 12315 10 - 218577 AACCTGGAAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1383244 10 + 91010382 AACCCGGAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 48217 10 + 74206 AACCTGGAAA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204149540 10 + 204313951 AACCCCAAAA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 77496 10 - 306014 AACCCCAAAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 122680 9 - 211231 AA-CCCAAAA i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 11936549 10 + 42124431 AACCCTTGAA i canFam3.chr34 I 149 I 3 s dasNov3.JH577625 350199 3 - 913073 -------AAG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e saiBol1.JH378155 16290207 2205 + 16417988 I e otoGar3.GL873745 2110038 0 - 2165740 C e colAng1.NW_012116910v1 783431 1631 - 1687011 I a score=1703820.000000 s hg38.chr3_KI270934v1_alt 108167 207 + 163458 CATTA--AAAATAGACTTGTG-CTAAGCGAGTGAAGTGTGA----CCT--CTCTATACTATCAGGAAATGGCCTTCATGATAAATTCTGAAAATGACCCACTG-CCTG-AATC--ACAGACACAC----------------TAGATGATAGTGA-GAGTCC--AAAGGTAACTTCCACAG-ACACAGCTAAGTGATTATAC--GACTCTCCCTTAC-----------------------------------AAGTTATGAAAAGCTTAAGGGTAAAA s panTro5.chr3 2578429 207 - 202621043 CATTA--AAAATAGACTTGTG-CTAAGCGAGTGAAGTGTGA----CCT--CTCTATACTATCAGGAAATGGCCTTCATGATAAATCCTGAAAATGACCCACTG-CCTG-AATC--ACAGACACAC----------------TAGATGATAGTGA-GAGTCC--AAAGGTAACTTCCACAG-ACACAGCTAAGTGATTATAC--GACTCTCCCTTAC-----------------------------------AAGTTATGAAAAGCTTAAGGGTAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 165657 209 - 190779 CATTA--AAAATAGACTTGTG-CTAAGCGAGTGAAGTGTGA----CCT--CCCTATACTATCAGGAAATGGCCTTCATGATAAATCCTGAAAATGACCCACTG-CCTG-AGTC--ACAGACACAC----------------TAGATGATAGTGA-GAGTCC--AAAGGTAACTTCCACAG-ACACAGCTAAGTGATTATAC--GACTCTCCCTTAC---------------------------------CAAGTTTATGAAAGACTTAAGGGTAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 971 214 + 880730 CATTA--AACATAGACTTGTGCCTAAGCGAGTGAAGTGTGA----CCT--GTCTATACTACCAGGAAATGGCCTTCATGATAAATCCTGAAAATGACCCACTGCCCTG-AATC--ACAGACACAC----------------TAGATGATAGTGA-GAGTCCCAAAAGGTAACTTCCACAGAACACAGCTAAGTGATTATACTGACCTCTCCCTTAC-----------------------------------AAGTTATGAAAAGCTTAAGGATAAAA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2889703 207 - 123690457 CATTA--AAAATAGACTTGTG-CTAAGCGAGTGAAGTGTGA----TTT--CTATACAGTATCAAGAAATGGCCTTCATGATAAATCCTGAAAATGACCTACTG-CCTG-AATA--ACAGACACAC----------------TAGATGATAGTGA-GAGTCC--AAAGGTAACTTCCACAA-ACATGGCTAAATGATTATAC--GACTATCTCTTAC-----------------------------------AAGCTACGAAAAGCTTAAGGGTAAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179827764 207 - 180051392 CATTA--AAAATAGACTTGTG-CTAAGCGAGTGAGGTGTAA----TTT--CTATATACGATCAGGAAATGGCCTTCATGATAAATTCTGAAAATGACCTACTG-CCTG-AATT--ACAGACACAC----------------TAGATGATAGTGA-GAGTCC--ACAGGTAACTTCCACAG-ACACAGATAAGTGATTATAC--GACTATCTCTTAC-----------------------------------AAGCTACGAAAAGCTTAAGGGTAAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1289127 207 + 181584905 CATTA--AAAATAGACTTGTG-CTAAGCGAGTGAGGTGTGA----TTT--CTATATACGATCAGGAAATGGCCTTCATGATAAATTCTGAAAATGACCTACTG-CCTG-AATT--ACAGACACAC----------------TAGATGATAGTGA-GAGTCC--ACAGGTAACTTCCACAG-ACACAGATAAGTGATTATAC--GACTATCTCTTAC-----------------------------------AAGCTACGAAAAGCTTAAGGGTAAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 52967 207 + 100774 CATTA--AAAATAGACTTGTG-CTAAGCGAGTGAGGTGTGA----TTT--CTATATACGATCAGGAAATGGCCTTCATGATAAATTCTGAAAATGACCTACTG-CCTG-AATT--ACAGACACAC----------------TAGATGATAGTGA-GAGTCC--ACAGGTAACTTCCACAG-ACACAGATAAGTGATTATAC--GACTATCTCTTAC-----------------------------------AAGCTACGAAAAGCTTAAGGGTAAAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 12325 240 - 218577 CATTA--AAAATAGACTTGTG-CTAAGCGAGTGAGGTGTGA----TTT--CTATATACGATCAGGAAATGGCCTTCATGATAAATTCTGAAAATGACCTACTG-CCTG-AATT----AGACACAC----------------TAGATGATAGTGA-GAGTCC--AAAGGTAACTTCCACAG-ACACAGATAAGTGATTATAC--GACTATCTcttacgcttttagctttcagcctcttaaacttttagccttaagctactaaaagcttaaggctaaaA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1383254 204 + 91010382 CATTA--AAAACAGACTTGTG-CTAGGCGAGTGAGGTGTGA----TTT--CTATATACGATCAGGAAATGGCCTTCATGACAAATTCTGAAAATGACCTACTG-CCTG-AAC-----AGACACAC----------------TAGATGATAGTGA-GAGTCC--AAAGGTAACTTCCACAG-ACACAGATAAGTGATTATAC--GACTATCTCTTAC-----------------------------------AAGCTACGAAAAGCTTAAGGGTAAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 48227 242 + 74206 CATTA--AAAATAGACTTGTG-CTAAGCGAGTGAGGTGTGA----TTT--CTATATACGATCAGGAAATGGCCTTCATGATAAATTCTGAAAATGACCTACTG-CCTG-AATT--AGAGACACAC----------------TAGATGATAGTGA-GAGTCC--AAAGGTAACTTCCACAG-ACACAGATAAGTGATTATAC--GACtatctcttacgcttttagcttttagcctcttaaacttttagccttaagctactaaaagcttaaggctaaaa i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204149550 205 + 204313951 CGTTA--AAAACAGACTTTCG-CTAAGCAAGTGAAGTGTGA----TTT--TTATATACTATCAGAAAATGGCCTTCATGATAAATCCTGAAAATGACCGATTG-CCTG-AATT--ACAGGCATAC----------------TAAATGACAGTGA-GAGCCC--AAACGAAACAGC--CAG-ACGCATGTAAATGATTATAC--AACTATCTCTTAC-----------------------------------AAGCTATGAAAAGCTTAAGGGTAAAA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 77506 205 - 306014 CATTA--AAAACAGACTTGTG-CTAAGCAAGTGAAGTGTGA----TTT--TTATATACTATCAGAAAATGGCCTTCATGATAAATCCTGAAAATGACCGATTG-CCTG-AATT--ACAGACACAC----------------TAAATGATAGTGA-GAGTCC--AAACGAAACATC--CAG-ACACAGGTAAATGATTATAC--AACTATCTCTTAC-----------------------------------AAGCTATGAAAAGCTTAAAGGTAAAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 122689 205 - 211231 CGTTA--AAAACAGACTTGTG-CTAAGCAAGTGAAGTGTGA----TTT--GTATATACTATCAGAAAATGGCCTTCACGATAAATCCTGAAAATGACCGATTG-CCTG-AATT--ACAGACACAC----------------TAAATGATAGTGA-GAGTCC--AAACGAAACATC--CAG-ACACAGGTAAATGATTATAC--AACTATCTCTTAC-----------------------------------AAGCTATGAAAAGCTTAAGGGCAAAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2110038 217 - 2165740 TATTA--AAAATAGGC-AGCG-CTAAAGAAGTGAAGTCTGA----CTT--CTATACACTATTCGAAAAATGACTTCATGATAAATTCTGAAAATGACAAACTG-CCTA-AATT--AAAGACACACGAGGTACACTACA---TAAGTGATGGC-A-GAGTTC--AT-CTTAACTTCTGTAG-ACACAGGAAAATTATTACAA--GATTATCTCTTAT-----------------------------------AAGCTATGAAAAGCTTAACAGTAGAA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11936562 215 + 42124431 TACTA--AAAACAGGGCTGTA-CCGAGAGA---AAGTCTCATTTCTTT--CTATACACTGTCAGAAAATAGCCTTCACGCAAAATTATGAAAGTTACTGCCTA-CTTGAAATA--ACAGACACACTAGGCTCTCTGTA--TTAAGTGATGGCAG-CAAAGC--A--CGTTATTTCTGTAG-ACTCACATAAATGATTAA----GACTCTCCCTTAC-----------------------------------AAG-TCTGAAAAGCTCAAG--TAAC- i canFam3.chr34 I 3 C 0 s dasNov3.JH577625 350202 230 - 913073 CATTATTAAAATAGGCTTGTG-CTAAGAGAGGGAAGCCTGA----CTTAAACATATTTTGTCAGGGAGTAGTGTTCATGATAAATTCTGAAAATTACTGATTC-CTGG-AGTTAAACAGACACACCAGGCACCCAAAACATTAAGTGAAGATGACAAAACC--CAATTTAATTTCTTTAG-ACCCCAAAAGATGAGAATAA--GACCATCCCTTAC-----------------------------------AAGTTAGGAAAAGCTTGCAGGCAAAA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e saiBol1.JH378155 16290207 2205 + 16417988 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I a score=579992.000000 s hg38.chr3_KI270934v1_alt 108374 70 + 163458 G---CTTTCTATCTTCATGATTTCT--GAATCT-CAATGCCCA-GTGG-AAATGCCACACAGGTGAACTGTGCTTG-TG s panTro5.chr3 2578636 70 - 202621043 G---CTTTCTATCTTCATGATTTCT--GAATCT-CAATGCCCA-GCAG-AAATGCCACACGGGTGAACTGTGCTTG-TG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 165866 77 - 190779 GGACTTTCTTATCTTCATGATTTCTTGTAATCTACAATGCCCACGCAG-AATAGCCACACGGGTGAACTGTGCTTG-TG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 1185 72 + 880730 G---CTTTCTATCTTCATGATTTCT--GAATCT-CAATGCCCA-GCGGAAAATGCCACACGGGTGAACTGTGCTTGTTG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2889910 70 - 123690457 G---CTTTCTGTCTTCATTATTTTT--GAATCT-CAATGCCCA-GCGG-AAATGCCACACGGGTGAACTGTGCTTG-TG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179827971 68 - 180051392 G---CTTTCTATCTTCATTTATTTT--GAATCT-TAATGGCCA-GCG---AATGCCACACAGGTGAACTGTGCTTG-TG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1289334 70 + 181584905 G---CTTTCTATCTTCATTATTTCT--GAATCT-TAATGCCCA-GCGG-AAATGCCACACAGGTGAACTGTGCTTG-TG i macFas5.chr6 C 0 I 3 s macNem1.NW_012013899v1 53174 70 + 100774 G---CTTTCTATCTTCATTATTTCT--GAATCT-TAATGCCCA-GCGG-AAATGCCACACAGGTGAACTGTGCTTG-TG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 12565 70 - 218577 G---CTTTCTATCTTCATTATTTCT--CAATCT-TAATGCCCA-GCGG-AAATGCCACACAGGTGAACTGTGCTTG-TG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1383458 70 + 91010382 G---CTTTCTATCTTCATTATTTCT--GAATCT-TAATGCCCA-GCGG-AAATGCCACACAGGTGAACTGTGCTTG-TG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 48469 70 + 74206 g---cttTCTATCTTCATTATTTCT--CAATCT-TAATGCCCA-GCGG-AAATGCCACACAGGTGAACTGTGCTGG-TG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204149755 69 + 204313951 G---CTTTCCATCTTCATTATTTCT--GAATCT-TAATGCCCA-GTGG-GAATGCCACAT-GGTGAACTGCGCTTG-CG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16292412 69 + 16417988 G---CTTTCCATCTTCATTATTTCT--GAATCT-TAATGCCCA-CTGG-CAATGCCACAC-GGCGAACTGCACTTG-GG i saiBol1.JH378155 I 2205 C 0 s cebCap1.NW_016108150v1 77711 69 - 306014 G---CTTTCCATCTTCATTATTTCT--GAATCT-TAATGCCCA-CTGG-CAATGCCACAT-GGTGAACTGCGCTTG-CG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 122894 69 - 211231 G---CTTTCCATCTTCATTATTTCT--GAATCT-TAATGCCCA-GTGG-CGATGCCACAC-GGTGAACTGCGCTTG-CG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2110255 57 - 2165740 A---CTTTGTATCTTCATTATTTCT--GAATCT-CAATGCTCC-ACAG--------------GTGAATTATGCTTC-AG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11936777 66 + 42124431 A---CTTTATATCTT----AGTTCT--GATTCT-TAATGTCCA-GCAG-AAATGGCAAATGGATGAGTTATGCTTT-GG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 350432 45 - 913073 ------------------------------ATT-CAATGCTGG-GCAC-AAATGCCAAGTGGTTAAATTACGCTTC-AG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I a score=32070.000000 s hg38.chr3_KI270934v1_alt 108444 3 + 163458 TGG s panTro5.chr3 2578706 3 - 202621043 TGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 165943 3 - 190779 TGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 1257 3 + 880730 TGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2889980 3 - 123690457 TGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179828039 3 - 180051392 TGG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 53244 3 + 100774 TGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 12635 3 - 218577 TGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1383528 3 + 91010382 TGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 48539 3 + 74206 TGG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204149824 3 + 204313951 TGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16292481 3 + 16417988 TGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 77780 3 - 306014 TCG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 122963 3 - 211231 TGG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2110312 3 - 2165740 CAG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11936843 3 + 42124431 TGG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 350477 3 - 913073 TGG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e macFas5.chr6 1289404 3 + 181584905 I a score=39276.000000 s hg38.chr3_KI270934v1_alt 108447 6 + 163458 AACAAG s panTro5.chr3 2578709 6 - 202621043 AACAAG i panTro5.chr3 C 0 I 130 s panPan2.chrUn_NW_014024201v1 165946 6 - 190779 AACAAG i panPan2.chrUn_NW_014024201v1 C 0 I 130 s gorGor5.CYUI01015759v1 1260 5 + 880730 AACAG- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2889983 6 - 123690457 AACAAG i nomLeu3.chr11 C 0 I 1 s rheMac8.chr6 179828042 4 - 180051392 -ACAA- i rheMac8.chr6 C 0 I 1 s macFas5.chr6 1289407 6 + 181584905 AACAAG i macFas5.chr6 I 3 I 1 s macNem1.NW_012013899v1 53247 6 + 100774 AACAAG i macNem1.NW_012013899v1 C 0 I 1 s cerAty1.NW_012004452v1 12638 6 - 218577 AACAAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1383531 6 + 91010382 AACAAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 48542 6 + 74206 AACAAG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204149827 6 + 204313951 AACAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16292484 5 + 16417988 AAC-GG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 77783 6 - 306014 AACAGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 122966 6 - 211231 AACAGG i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 11936846 6 + 42124431 AATAAG i canFam3.chr34 C 0 I 1 s dasNov3.JH577625 350480 6 - 913073 AACGAG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e otoGar3.GL873745 2110315 0 - 2165740 C e colAng1.NW_012116910v1 783431 1631 - 1687011 I a score=51149.000000 s hg38.chr3_KI270934v1_alt 108453 46 + 163458 CTGCAACC-CCCTACCACACCCTCGGCTGGCTGTTCCCAAGACGCTG s panTro5.chr3 2578845 46 - 202621043 CTGCAACC-CCCTACCACACCCTCGGCTGGCTGTTCCCAAGACGCTG i panTro5.chr3 I 130 C 0 s panPan2.chrUn_NW_014024201v1 166082 46 - 190779 CTGCAACC-CCCTACCACACCCTCGGCTGGCTGTTCCCAAGACGCTG i panPan2.chrUn_NW_014024201v1 I 130 C 0 s gorGor5.CYUI01015759v1 1265 8 + 880730 CTGCAACC--------------------------------------- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179828047 45 - 180051392 CTGAAACCCCCCTAC--CACCCTTGGCTGGCTGTTCCCAGGACGCTG i rheMac8.chr6 I 1 I 27 s macFas5.chr6 1289414 47 + 181584905 CTGCAACCCCCCTACCACACCCTTGGCTGGCTGTTCCCAGGACACTG i macFas5.chr6 I 1 T 57 s macNem1.NW_012013899v1 53254 47 + 100774 CTACAACCCCCCTACCACACCCTTGGCTGGCTGTTCCCAGGACACTG i macNem1.NW_012013899v1 I 1 I 15 s otoGar3.GL873745 2110315 32 - 2165740 ----AACC-TTTTACTGCAACCTTAACAGGCCACCCC---------- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11936853 33 + 42124431 CTGTGAGG-CTCTACTGCAACCTAAGCTGGCTGT------------- i canFam3.chr34 I 1 C 0 e mm10.chr13 74323290 262 + 120421639 I e aotNan1.NW_018494784v1 122972 0 - 211231 C e dasNov3.JH577625 350486 0 - 913073 C e saiBol1.JH378155 16292489 0 + 16417988 C e calJac3.chr2 204149833 0 + 204313951 C e cebCap1.NW_016108150v1 77789 0 - 306014 C e colAng1.NW_012116910v1 783431 1631 - 1687011 I e manLeu1.NW_012101728v1 48548 0 + 74206 C e chlSab2.chr4 1383537 0 + 91010382 C e cerAty1.NW_012004452v1 12644 0 - 218577 C e nomLeu3.chr11 2889989 1 - 123690457 I a score=3189.000000 s hg38.chr3_KI270934v1_alt 108499 8 + 163458 TGCTTGTG s panTro5.chr3 2578891 8 - 202621043 TGCTTGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 166128 8 - 190779 TGCTTGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s otoGar3.GL873745 2110347 6 - 2165740 --CTAGTG i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e aotNan1.NW_018494784v1 122972 0 - 211231 C e dasNov3.JH577625 350486 0 - 913073 C e macNem1.NW_012013899v1 53301 15 + 100774 I e saiBol1.JH378155 16292489 0 + 16417988 C e calJac3.chr2 204149833 0 + 204313951 C e cebCap1.NW_016108150v1 77789 0 - 306014 C e canFam3.chr34 11936886 0 + 42124431 C e colAng1.NW_012116910v1 783431 1631 - 1687011 I e manLeu1.NW_012101728v1 48548 0 + 74206 C e chlSab2.chr4 1383537 0 + 91010382 C e cerAty1.NW_012004452v1 12644 0 - 218577 C e macFas5.chr6 1289461 57 + 181584905 T e rheMac8.chr6 179828092 27 - 180051392 I e nomLeu3.chr11 2889989 1 - 123690457 I e gorGor5.CYUI01015759v1 1273 0 + 880730 C a score=143894.000000 s hg38.chr3_KI270934v1_alt 108507 48 + 163458 TGGAACAA---GCTGCAACCCCCCTA-CCACACCCTCGGCT-GGC-TGTTCCCA s panTro5.chr3 2578899 48 - 202621043 TGGAACAA---GCTGCAACCCCCCTA-CCACACCCTTGGCT-GGC-TGTTCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 166136 48 - 190779 TGGAACAA---GCTGCAATCCCCCTA-CCACACCCTTGGCT-GGC-TGTTCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 1273 33 + 880730 -------------------CCCCCTA-CCACACCCTCAGCT-GGCTTGTTCCCA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2889990 39 - 123690457 ------------CTGCAACCCCCCTA-CCACACCCTCGGCT-GGC-TGTTCCCA i nomLeu3.chr11 I 1 C 0 s macFas5.chr6 1289404 49 + 181584905 TGGAACAA--GGCTGCAACCCCCCTA-CCACACCCTTGGCT-GGC-TGTTCCCA i macFas5.chr6 T 57 C 0 s cerAty1.NW_012004452v1 12644 40 - 218577 -----------GCTGCAAACCCCCTA-CCACACCCTTGGCT-GGT-TGTTCCCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1383537 40 + 91010382 -----------GCTGCAGCCCCCCTA-CCACACCCTTGGCT-GGC-TGTTCCCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 48548 40 + 74206 -----------GCTGCAAACCCCCTA-CCACACCCTTGGCT-GGT-TGTTCCCA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204149833 39 + 204313951 -----------GCTGCAAGCCTCC-A-GCACACCCTCGGCT-GGC-TGTTACCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16292489 39 + 16417988 -----------CCCGCAAGCCCCC-A-GCACACCCTCGGCT-GGC-TGTTACCA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 77789 39 - 306014 -----------GCTGCAAGCCCCC-AGGCACACCCTCGGCT-GGC-TATTA-CA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 122972 39 - 211231 -----------GCTGCAAGCCCCC-A-GCACACCCTTGGCT-GGC-TGTTACCA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2110353 49 - 2165740 ---CACAGCCCACTCCAGCTCCTCTT-CAGTGTCTATGTTTCTGC-TGTGCCCA i otoGar3.GL873745 C 0 I 292 s canFam3.chr34 11936886 4 + 42124431 --------------------------------------------------CCCA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 350486 39 - 913073 ------------AGGACACGCTCATA-TTGCAGCCTGAGCT-GGA-TTTTCCCG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e macNem1.NW_012013899v1 53301 15 + 100774 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e rheMac8.chr6 179828092 27 - 180051392 I a score=29127.000000 s hg38.chr3_KI270934v1_alt 108555 5 + 163458 GGACG s panTro5.chr3 2578947 5 - 202621043 GGACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 166184 5 - 190779 GGACG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 1306 5 + 880730 GGACG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2890029 5 - 123690457 GGATG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1289453 5 + 181584905 GGACA i macFas5.chr6 C 0 I 18 s cerAty1.NW_012004452v1 12684 5 - 218577 GGACA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1383577 5 + 91010382 GGACG i chlSab2.chr4 C 0 I 18 s manLeu1.NW_012101728v1 48588 5 + 74206 GGACA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204149872 5 + 204313951 GGACG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16292528 5 + 16417988 GGACC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 77828 5 - 306014 GAATC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 123011 5 - 211231 GGACG i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 11936890 5 + 42124431 GGACT i canFam3.chr34 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e dasNov3.JH577625 350525 0 - 913073 C e macNem1.NW_012013899v1 53301 15 + 100774 I e otoGar3.GL873745 2110402 292 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e rheMac8.chr6 179828092 27 - 180051392 I a score=94797.000000 s hg38.chr3_KI270934v1_alt 108560 13 + 163458 CTGCTTACCCCAA s panTro5.chr3 2578952 13 - 202621043 CTGCTTACCCCAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 166189 13 - 190779 CTGCTTACCCCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 1311 13 + 880730 CTGCTTACCCCAA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2890034 13 - 123690457 CTGCTTACCCCAA i nomLeu3.chr11 C 0 I 214 s macFas5.chr6 1289476 13 + 181584905 CTGCTTACCCCAA i macFas5.chr6 I 18 I 1 s macNem1.NW_012013899v1 53316 13 + 100774 CTGCTTACCCCAA i macNem1.NW_012013899v1 I 15 I 1 s cerAty1.NW_012004452v1 12689 13 - 218577 CTGCTCACCCCAA i cerAty1.NW_012004452v1 C 0 I 1 s chlSab2.chr4 1383600 13 + 91010382 CTGCTCACCCCAA i chlSab2.chr4 I 18 I 1 s manLeu1.NW_012101728v1 48593 13 + 74206 CTGCTCACCTCAA i manLeu1.NW_012101728v1 C 0 I 1 s calJac3.chr2 204149877 13 + 204313951 CTGCTCACCCAAC i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 16292533 13 + 16417988 CTGCTCACCCAAC i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 77833 13 - 306014 CTGCTCACCTAAC i cebCap1.NW_016108150v1 C 0 I 1 s aotNan1.NW_018494784v1 123016 13 - 211231 CTGCTCACCCAAC i aotNan1.NW_018494784v1 C 0 I 1 s canFam3.chr34 11936895 13 + 42124431 CTGCCCACTGCAC i canFam3.chr34 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e dasNov3.JH577625 350525 0 - 913073 C e otoGar3.GL873745 2110402 292 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e rheMac8.chr6 179828092 27 - 180051392 I a score=9669.000000 s hg38.chr3_KI270934v1_alt 108573 5 + 163458 CCCTG s panTro5.chr3 2578965 5 - 202621043 CCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 166202 5 - 190779 CCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 1324 5 + 880730 CCCTG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2890261 5 - 123690457 CCCCT i nomLeu3.chr11 I 214 C 0 s macFas5.chr6 1289490 4 + 181584905 CCCT- i macFas5.chr6 I 1 C 0 s macNem1.NW_012013899v1 53330 4 + 100774 CCCT- i macNem1.NW_012013899v1 I 1 C 0 s cerAty1.NW_012004452v1 12703 4 - 218577 CCCT- i cerAty1.NW_012004452v1 I 1 C 0 s chlSab2.chr4 1383614 4 + 91010382 CCCT- i chlSab2.chr4 I 1 C 0 s manLeu1.NW_012101728v1 48607 4 + 74206 CCCT- i manLeu1.NW_012101728v1 I 1 C 0 s calJac3.chr2 204149891 4 + 204313951 CGCT- i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 16292547 4 + 16417988 CCCT- i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 77847 4 - 306014 CCCT- i cebCap1.NW_016108150v1 I 1 C 0 s aotNan1.NW_018494784v1 123030 4 - 211231 CCCT- i aotNan1.NW_018494784v1 I 1 C 0 s canFam3.chr34 11936908 3 + 42124431 CCC-- i canFam3.chr34 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e dasNov3.JH577625 350525 0 - 913073 C e otoGar3.GL873745 2110402 292 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e rheMac8.chr6 179828092 27 - 180051392 I a score=1503038.000000 s hg38.chr3_KI270934v1_alt 108578 209 + 163458 -CC--TCCATTTC--TGCC-----CTTCTCTGCTTGCTCAGTGCCCAGGGGATGCTAAGGGCTGCACCACATCCCCTCTGCTCCCCTGCAGATGCTTCCAGTTGGCCCAGCCCATGGGAAGAGAGGGG--AGGGGTCTCTTCTGGGCTCCCTTGGCTCGGGAC-TGGTTTCTGGTAGTGGC--TCTGTCCCCACCACACAGATGCTGACTT--TCTCGCTAGGTCC s panTro5.chr3 2578970 209 - 202621043 -CC--TCCATTTC--TGCC-----CTTCTCTGCTTGCTCAGTGCCCAGGGGATGCTAAGGGCTGCACCACATCCCCTCAGCTCCCTTGCAGATGCTTCCAGTTGGCCCAGCCCATGGGAGGAGAGGGG--AGGGGTCTCTTCTGGGCTCCCTTGGCTCGGGAC-TGGTTTCTGGTAGTGGC--TCTGTCCCCACCCAACAGATGCTGACTT--TCTCGCTAGGTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 166207 209 - 190779 -CC--TCCATTTC--TGCC-----CTTCTCTGCTTGCTCAGTGCCCAGGGGATGCTAAGGGCTGCACCACATCCCATCAGCTCCCTTGCAGATGCTTCCAGTTGGCCCAGCCCATGGGAGGAGAGGGG--AGGGGTCTCTTCTGGGCTCCCTTGGCTCGGGAC-TGGTTTCTGGTAGTGGC--TCTGTCCCCACCCCACAGATGCTGACTT--TCTCGCTAGGTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 1329 208 + 880730 -CC--TCCATTTC--TGCC-----CTTCTCTGCTTGCTCAGTGCCCAGGGGATGCTAAGGGCTGCACCAACATCCCTCAGCTCCCCTGCAGATGCTTCCAGTTGGCCCAGCCCATGGGAGGAGAGGGGGAAGGGGTCTCTTCTGGGCTCCCTTGGCTCGGGACTTGGTTTCTGGTAGTGGC--TGTGTCCCCACCCCACACATG----CTT--TCTCACTAGGTCC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2890266 209 - 123690457 -CC--TCAATTTC--TGCC-----CTTCTCTGCTTGCTCAGTGCCCAGGGGATGCTAAGGGCTGCACCACATCCCCTCAGCTCCCCTGCAGGCGCTTCCAGTTGGCCCAGCCCATGGGAGGAGAGGGG--AGGGGTCTCTTCCGGGCTCTCTTGGCATGGGAC-TGGTTTCTGGTAGTGGC--TGTGTCCCCACCCTACAGATGCTGACTT--TCTCGCTAGGTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179828119 205 - 180051392 -CC--TCAATTTCTTTGCCCTTCCCTTCTCTG-TTGCTCAGTG-CCAGGGGATGCTAAGCGCTGC----CAT-CCCTCGGCT-CCCTGCAGATGCTTCCAGCT-GGCCAGCCCAAGGGAGGAGAGGGG--AGGGGTCTCTTCTGGGCTCC--TGGCTTGGGCT-CGGTTTCTGGTAGTGGC--TGTGGTCCCCACCCACAGACGCTGACTT--TCTCCCTAAGTCC i rheMac8.chr6 I 27 C 0 s macFas5.chr6 1289494 214 + 181584905 -CC--TCAATTTC--TGCCCTTCCCTTCTCTGCTTGCTCAGTGCCCAGGGGATGCTAAGCGCTGCACCACATCCCCTCGGCTCCCCTGCAGATGCTTCCAGCTGGGCCAGCCCAAGGGAGGAGAGGGG--AGGGGTCTCTTCTGGGCTCCCTTGGCTTGGGAC-TGGTTTCTGGTAGTGGC--TGTGTCCCCACCCCACAGACGCTGACTT--TCTCCCTAAGTCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 53334 214 + 100774 -CC--TCAATTTC--TGCCCTTCCCTTCTCTGCTTGCTCAGTGCCCAGGGGATGCTAAGGGCTGCACCACATCCCCTCGGCTCCCCTGCAGATGCTTCCAGCTGGGCCAGCCCAAGGGAGGAGAGGGG--AGGGGTCTCTTCTGGGCTCCCTTGGCTTGGGAC-TGGTTTCTGGTAGTGGC--TGTGTCCCCACCCCACAGACGCTGACTT--TCTCCCTAAGTCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 12707 216 - 218577 -CC--TCAATTTC--TGCCCTTCGCTTCTCTGCTTGCTCAGTGCCCAGGGGATGCTAAGGGCTGCACCACATCCCCTCGGCTCCCCTGCAGATGCTTGCAGTTGGGCCAGCCCAAGGGAGGAGAGGGG--AGGGGTCTCTTCTGGGCTCCCTTGGCTTGGGAC-TGGTTTCTGGTAGTGGCTGTGTGTCCCCACCCCACAGACGCTGACTT--TCTCCCTAAGTCC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1383618 216 + 91010382 -CC--TCAATTTC--TGCCCTTCCCTTCTCTGCTTGCTCAGTGCCCAGGGGATGCTAAGGGCTGCACCACATCCCCTCGGCTCCCGTGCAGATGCTTCCAGTTGGGCCAGCTCAAGGGAGGAGAGGGG--AGGGGTCTCTTCTGGGCTCCCTTGGCTTGGGAC-TGGTTTCTGGTAGTGGCTGTGTGTCCCCACCCCACAGACGCTGACTT--TCTCCCTAAGTCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 48611 216 + 74206 -CC--TCAATTTC--TGCCCTTCGCTTCTCTGCTTGCTCAGTGCCCAGGGGATGCTAAGGGCTGCACCACATCCCCTCGGCTCCCCTGCAGATGCTTGCAGTTGGGCCAGCCCAAGGGAGGAGAGGGG--AGGGGTCTCTTCTGGGCTCCCTTGGCTTGGGAC-TGGTTTCTGGTAGTGGCTGTGTGTCCCTACCCCACAGACGCTGACTT--TCTCCCTAAGTCC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204149895 207 + 204313951 -TC--TCACTTTC--TGCC-----CTTCTCTGCTTGCTCAGTGCCCAAGGGAGGCTAAGGGCTGCACCGCA-CCCCTCAGCTTCCCTGCTGCTGCTTCCAGGTGGCCCAGCCTGTGGGAAGAGAGGGG--AGTGGTCTCTTCTGGGCTCCCTTGGCTTGGGAC-AGGTTTCTGGTAGTGGCTGAGTGTCCCCACCC--CAGACCTTGAC-T--TCTTGCTAGGTCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16292551 207 + 16417988 -CC--TTACTTTC--TGCC-----CTTCTCTGCCTGCTCAGTGCCCAGGGGATGCTAAGGGCTGCACCGCA-CCCCTCAGCTCTCCTGCTGCTGCTTCCAGGTAGCCCAGCCCGTGGGAACAGAGGGG--AGTGGTCTCTTCTGGGCTCCCTGGGCTTGGGAC-AGGTTTCTGGTAGTGGCTGTGTGTCCCCACCC--CAGACCTTGAC-T--TCTCGCTAGGTCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 77851 199 - 306014 -CC--TCACTTTC--TGCC-----CTTCTCTGCTTGCTCAGTGCCCAGGGGAGGCTAAGGGCTGCACTGCA-CCCCTCA--------GCTGCTGCTTCCAGGTGGCCCAGCCCATGGGAAGAGAGGGG--AGCAGTCTCTTCTGGGCTCCCTTGGCTTGGGAC-AGGTTTCTGGTAGTGGCTGTGTGTCCCCACCC--CAGACCTTGAC-T--TCTCGCTAGGTCT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 123034 206 - 211231 -CC--TCACTTTC--TGCC-----CTTCTCTGCTTGCTCAGTGCCCAGGGGAGGCTAAGGGTTGCACTGCG-CCCCTCAGCTCCCCTGCTGCTGCTTCCAGGTGGCCCAGCCCGTGGGAAGAGAAGGG--AGCGGTCTCTTCTGGGCTCCCT-GGCTTGGGAC-AGGTTTCTGGTAGTGGCTGTGTGTCCCCACCT--CAGACCTTGAC-T--TCTCGCTAGGTCT i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 11936911 135 + 42124431 ------------------------CTCCTCTGCTTGCTCTGTGCTGGGCCCATGCTGTGGGCTACACAGCA-TACTCCGTGTTCCCTGAGGCTGCCTCCAGATGGTCCAGCC------------------AATGCCCCCC---------------------AC--------------------CTTGCCCCCACCCCAC-------GACCTGCTCTCATTGGGCTC i canFam3.chr34 C 0 I 1 s dasNov3.JH577625 350525 88 - 913073 TCCAGTGAGTCCC--TGTC-----TCTCTCTGCC-GCCCTGTGCCCTGG---------GGGCTGGACCCCATCACCTGGGCTCC---GAGGCTGCTTCTGCATTACGC---------------------------------------------------------------------------------------------------------------------- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e otoGar3.GL873745 2110402 292 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I a score=113029.000000 s hg38.chr3_KI270934v1_alt 108787 17 + 163458 ACAATCATCATCTCCTC s panTro5.chr3 2579179 17 - 202621043 ACAATCATCATCTCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 166416 17 - 190779 ACAATCATCATCTCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 1537 17 + 880730 ATAATCATCATCTCTTC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2890475 14 - 123690457 ACA---ATCATCTCCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179828324 15 - 180051392 AC-ATCCTCATCTCCT- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1289708 17 + 181584905 ACAATCCTCATCTCCTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 53548 17 + 100774 ACAATCCTCATCTCCTC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 12923 17 - 218577 ACAATCCTCATCTCCTC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1383834 17 + 91010382 ACAATCCTCATCTCCTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 48827 17 + 74206 ACAATCCTCATCTCCTC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204150102 17 + 204313951 ACAATCATTGTCTCCTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16292758 17 + 16417988 ACAATCATCGTGTCCTC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 78050 17 - 306014 ACAATCATTGTCTCCTC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 123240 16 - 211231 ACAATCATCGTCTCCT- i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74323552 16 + 120421639 ATAGTCACCACTAACT- i mm10.chr13 I 262 C 0 s canFam3.chr34 11937047 15 + 42124431 AGAATCATCCTCTCC-- i canFam3.chr34 I 1 C 0 e dasNov3.JH577625 350613 0 - 913073 C e otoGar3.GL873745 2110402 292 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I a score=744938.000000 s hg38.chr3_KI270934v1_alt 108804 87 + 163458 CCCTGCCACCAGGCCTTGGACACTTG-CTCCTGCCCAGTGACTTCCATCTGGCCCACACCACAG--AGCAA--C---------------------CCTTCCTTAAGGCTCCTC s panTro5.chr3 2579196 87 - 202621043 CCCTGCCACCAGGCCTTGGACACTTG-CTCCTGCCCAGTGACTTCCATCCGGCCCACACCACGG--AGCAA--C---------------------CCTTCCTTAAGGCTCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 166433 87 - 190779 CCCTGCCACCAGGCCTTGGACACTTG-CTCCTGCCCAGTGACTTCCATCTGGCCCACACCACGG--AGCAA--C---------------------CCTTCCTTAAGGCTCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 1554 86 + 880730 CCCTGCCACCAGGCCTTGGACACTTG-CTCCTG-CCAGTGACATCCATCTGGCCCACACCACGG--AGCAA--C---------------------CCTTCCTTAAGGCTCCTC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2890489 87 - 123690457 CCCTGCCACCAGGCCTTGGACACTTG-CTCCTGCCCAGGGACTTCCATCTGGCCCACACCACGG--AGCAA--C---------------------CCCTCCTTAAGGCTCCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179828339 89 - 180051392 CCCGCTCACCAGGCCTTGGACACTTG-CTCCTGCCAGTGGACTTCCATCTGG-CCACACCACGG-AAGCAAGCC---------------------CTTTCCTTAAGGCTCCTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1289725 87 + 181584905 CCCGCTCACCAGGCCTTGGACACTTG-CTCCTGCCCAGTGACTTCCATCTGGCCCACACCACGG--AGCAG--C---------------------CCTTCCTTAAGGCTCCTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 53565 87 + 100774 CCCGCTCACCAGGCCTTGGACACTTG-CTCCTGCCCAGTGACTTCCATCTGGCCCACACCACGG--AGCAG--C---------------------CCTTCCTTAAGGCTCCTC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 12940 87 - 218577 CCCGCTCACCAGGCCTTGGACACTTG-CTCCTGCCCAGTGACTTCCATCTGGCCCACACCACGG--AGCAG--C---------------------CCTTCCTTAAGGCTCCTC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1383851 86 + 91010382 CCCGC-CACCAGGCCTTGGACACTTG-CTCCTGCCCAGGGACTTCCATCTGGCCCACACCACGG--AGCAG--C---------------------CCTTCCTCAAGGCTCCTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 48844 87 + 74206 CCCGCTCACCAGGCCTTGGACACTTG-CTCCTGCCCAGTGACTTCCATCTGGCCCACACCACGG--AGCAG--C---------------------CCTTCCTTAAGGCTCCTC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204150119 86 + 204313951 CCCTGCCACCAGGCCTTGGACACTTG-CTCCTGTCCAGTGACTTCCATTTGGCCCACACCACGG--AGCAA--C---------------------CCTTCCT-AAGGCTCCTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16292775 86 + 16417988 CCCTGCCACCAGGCCTTGGACACTTG-CTCCTGTCCAGTGACTTCCATCTGGCCCACACTACGG--AGCAG--C---------------------CCTTCCT-AAGGCTCCTC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 78067 86 - 306014 CCCTGCCACCAGGCCTTGGACGCTTG-CTCCTGTCCAGTGACTTCCATCTGGCCCACACTACGG--AGTAA--C---------------------CCTTCCT-AAGGCTCCTC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 123256 86 - 211231 CCCTGCCACCAGGCCTTGGACACTTG-CTCCTGTCCAGTGACTTCCATCTGGCCCACACCATGG--AGCAA--C---------------------CCTTCCT-AAGGCTCCTC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2110694 104 - 2165740 GCCTGCAACCATGGTTACCACATGTG-CACCCGTCCAAGGGCCAAC----GGCTCAGAGAAAGG--AGCTA--TGGCAGATAAAAGGTATTCCAGTCTTCCTTACTGCTCCTC i otoGar3.GL873745 I 292 I 303 s mm10.chr13 74323568 89 + 120421639 CCCTACCA-CAAGCATCAGACATCTGATTATTGCCCAGTGCTCTTCACCTGGTACAGAAGATGAGAACCAG--T---------------------CCTATACTAAGGGTCCCC i mm10.chr13 C 0 I 1 s canFam3.chr34 11937062 61 + 42124431 -CCTGCCACCAAGCCTTGGGCAC----TCCCTGCCAGGTG--CTACAACTG-------TGGAAG--ACCAG--C---------------------ACTTC------------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 350613 31 - 913073 ----------------------------------------------------CCCATGCCACAG---------G---------------------CCCTCCGTGAGGCCCTCC i dasNov3.JH577625 C 0 C 0 e colAng1.NW_012116910v1 783431 1631 - 1687011 I a score=40919.000000 s hg38.chr3_KI270934v1_alt 108891 3 + 163458 TGA s panTro5.chr3 2579283 3 - 202621043 TGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 166520 3 - 190779 TGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 1640 3 + 880730 TGA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2890576 3 - 123690457 TGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179828428 3 - 180051392 TGA i rheMac8.chr6 C 0 I 38 s macFas5.chr6 1289812 3 + 181584905 TGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 53652 3 + 100774 TGA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 13027 3 - 218577 TGA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1383937 3 + 91010382 TGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 48931 3 + 74206 TGA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204150205 3 + 204313951 TGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16292861 3 + 16417988 TGA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 78153 3 - 306014 TGA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 123342 3 - 211231 TGA i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74323658 3 + 120421639 TGA i mm10.chr13 I 1 C 0 s canFam3.chr34 11937123 3 + 42124431 TAA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 350644 3 - 913073 TGA i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 2110798 303 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I a score=52774.000000 s hg38.chr3_KI270934v1_alt 108894 6 + 163458 -ACCACC s panTro5.chr3 2579286 6 - 202621043 -ACCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 166523 6 - 190779 -ACCACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 1643 6 + 880730 -ACCACC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2890579 6 - 123690457 -ACCACC i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1289815 6 + 181584905 -ACCACC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 53655 6 + 100774 -ACCACT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 13030 6 - 218577 -ACCACT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1383940 6 + 91010382 -GCCACC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 48934 6 + 74206 -ACCACT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204150208 6 + 204313951 -ACCACT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16292864 6 + 16417988 -ACCACT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 78156 6 - 306014 -ACCACT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 123345 6 - 211231 -ACCACT i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74323661 6 + 120421639 -ACCACC i mm10.chr13 C 0 C 0 s canFam3.chr34 11937126 6 + 42124431 -ACCACC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 350647 6 - 913073 GACGTC- i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 2110798 303 - 2165740 I e colAng1.NW_012116910v1 783431 1631 - 1687011 I e rheMac8.chr6 179828431 38 - 180051392 I a score=348760.000000 s hg38.chr3_KI270934v1_alt 108900 35 + 163458 TGCAGGCACTGGATTCTGTTTCCAGCCCG-AAGCCC s panTro5.chr3 2579292 35 - 202621043 TGCAGGCACTGGATTCTGTTTCCAGCCCG-AAGCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 166529 35 - 190779 TGAAGGCACTGGATTCTGTTTCCAGCCCG-AAGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 1649 36 + 880730 TGCAGGCACTGGATTCTGTTTCCAGCCCGAAAGCCC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2890585 35 - 123690457 TGCAGGCACTGGATTTTGTCTCCAGCCCG-AAGCCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1289821 35 + 181584905 TGCAGGCGCTGGATTCTGTTTCCAGCCAG-AAGCCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 53661 35 + 100774 TGCAGGCGCTGGATTCTGTTTCCAGCCAG-AAGGCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 13036 35 - 218577 TGCAGGCGCTGGATTCTGTTTCCAGCCAG-AAGCCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1383946 35 + 91010382 TGCAGGCGCTGGATTCGGTTTCCAGCCAG-AAGCCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 48940 35 + 74206 TGCAGGCGCTGGATTCTGTTTCCAGCCAG-AAACCT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 785062 35 - 1687011 TGCAGGCACTGGATTCTGTTTCCAGCCAG-AAGCCT i colAng1.NW_012116910v1 I 1631 C 0 s calJac3.chr2 204150214 34 + 204313951 CACAGGCACTGGA-TCCGTTTCTGGCCAG-AAGCCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16292870 35 + 16417988 CGCAGGCACTGGATTCTGTTTCCAGCCAG-AAGCCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 78162 35 - 306014 GGCAGGCACTGGATTCTGTTTCTAGCCAG-AAGCCT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 123351 35 - 211231 CACAGGCACTGGATTCTGTTTCCAGCCAG-AAGCCT i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74323667 33 + 120421639 --CAGGCACTGGTTTCTGTTTCTAGCAAG-AAGCAT i mm10.chr13 C 0 C 0 s canFam3.chr34 11937132 34 + 42124431 CATCCACACTGGATTCTGTTTCCAA-GAG-AAGCCC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 350653 29 - 913073 ----TGCACTGGACTC--TTCCCAGGCGG-AGCCCT i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 2110798 303 - 2165740 I e rheMac8.chr6 179828431 38 - 180051392 I a score=818035.000000 s hg38.chr3_KI270934v1_alt 108935 95 + 163458 GACTGCTGTCAGAGTGCCTTTTTCAGCGG--TGCCTCAAATCTGTCGGGAGTTGATTTAAATCTGGCC-TGCTCCTC---CGCGTTCACCATCAGCAAGGC s panTro5.chr3 2579327 95 - 202621043 GACTGCTGTCAGAGTGCCTTTTTCAGCGG--TGCCTCAAATCTGTCCGGAGTTGATTTAAATCTGGCC-TGCTCCTC---CGTGTTCACCATCAGCAAGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 166564 95 - 190779 GACTGCTGTCAGAGTGCCTTTTTCAGCGG--TGCCTCAAATCTGTCCGGAGTTGATTTAAATCTGGCC-TGCTCCTC---CGCGTTCACCATCAGCAAGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 1685 95 + 880730 GACTGCTGTCAGAGTACCTTTATCAGTGG--TGCCTCAAATCTGTCGGGAGGTGATTTAAATCTGGCC-TGCTCCTT---CCCGTTCACCATCAGCAAGGC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2890620 93 - 123690457 GACTGC-GTCAGAGTG-CTTTTTCAGTGG--TGCCTCAAATCTGTCAGGAGTTGATTTAAATCTGGCC-TGCTCCTC---CCCGTTCACCATCAGCAAGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179828469 93 - 180051392 GACTGCTGTCAGAG-GCCTTTTTCAGTGG--TGCCTCAATCTGTTCAGGAG-TGATTTAAATCTGGCCTTGCTCCTC---C-CGTTCACCATCAGCAAGGT i rheMac8.chr6 I 38 I 33 s macFas5.chr6 1289856 94 + 181584905 GACTGCTGTCAGAG-GCCTTTTTCAGTGG--TGCCTCAAATCTGTCAGGAGTTGATTTAAATCTGGCC-TGCTCCTC---CCCGTTCACCATCAGCAAGGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 53696 96 + 100774 GACTGCTGTCAGAGTGCCTTTTTCAGTGGGTGGCCTCAAATCTGTCAGGAGTTGATTTAAATCTGGCC-TGCTCCTC---CGCGTTCA-CATCAGCAAGGT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 13071 95 - 218577 GACTGCTGTCAGAGTGCCTTTTTCAGTGG--TGCCTCAAATCTGTCAGGAGTTGATTTAAATCCGGCC-TGCTCCTC---CCCGTTCACCATCAGCAAGGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1383981 95 + 91010382 GACTGCTGTCAGAGTGCCTGTTTCAGTGG--TGCCTCAAATCTGTCAGGAGTTGATTTAAATCCGGCC-TGCTCCTC---CCGGTTCACCATCAGCAAGGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 48975 95 + 74206 GACTGCTGTCAGAGTGCCTTTTTCAGTGG--TGCCTCAAATCTGTCAGGAGTTGATTTAAATCCGGCC-TGCTCCTC---CCCGTTCACCATCAGCAAGGT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 785097 95 - 1687011 GACTGCTGTCAGAGTGCCTTTTTCAGCGG--TGCCTCAAATCTGTCAGGAGTTGATTTAAACCTGGCC-TGCTCCTC---CCCGTTCACCATCAGCAAGGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204150248 90 + 204313951 ---GACTGACAGAGTG-CTTTCTCAGTGG--TGCCTCACATCTGTCAGT-GCTGGCTTAAATCTGGCC-TGCTTCTC---CCCATTCACCATCAGCAAGGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16292905 90 + 16417988 ---GACTGACAGAGTG-CTTTCTCGGTGG--TGCCTCACATCTGTCAGC-GCTGGCTTAAATCTGGCC-TACTCCTC---CCCGTTCACCATCAGCAGGGC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 78197 90 - 306014 ---GACTGACATAGTG-CTTTTTCAGTGG--TGCCTCACATCTGCCAGT-GTTGGCTTAAATCTGGCC-TGCTCCTC---CCTGTGCACCATCAGCAAGGC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 123386 90 - 211231 ---GACTGACGGAGTG-CTTTTTCAGTGG--TGCCTCACATCTGTCAGT-GTTGGCTTAAATCTGGCC-TGCTCCTC---CCCGTTCACCATCAGCAAGGC i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74323700 92 + 120421639 GACTCACGTTA----CTTTTTTTCAGTGA--TATCTTGGTTCAGTTAACAACTGGTTTAAAACTAGGT-TGCTTTCTAAACTGGTCAACCATCA--AAAGC i mm10.chr13 C 0 C 0 s canFam3.chr34 11937166 86 + 42124431 -------AACA-AGAGTCCTTTTCAGTAG--TGTCTCAGGTCTGCCAACAG-GGACTTAAATCCATGT-TGCTTCTC---CCAGCCCATCATAAGTTGTAC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 350682 62 - 913073 -------GACA------------CGGTGG--TGCTCCAAGCACATC-GCAGTGGATTTAAATCTCTGC-CGC-ACAC---ACCGAACAC------------ i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 2110798 303 - 2165740 I a score=201004.000000 s hg38.chr3_KI270934v1_alt 109030 39 + 163458 CAGCCCGCAGACCTGGGCGGG-------GCCGTGTGGGT-GCTGGGC s panTro5.chr3 2579422 39 - 202621043 CAGCCCGCAGACCTGGGCGGG-------GCCGTGTGGGT-GCTGGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 166659 39 - 190779 CAGCCCGCAGACCTGGGCGGG-------GCCGTGTGGGT-GCTGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 1780 39 + 880730 CAGCCCGCAGACCTGGGTGGG-------GCCGTGTGGGT-GCTGGGC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2890713 39 - 123690457 CAGCCTGCAGACCTGGGTGGG-------GCCGTGTGGGT-GCTGGGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1289950 39 + 181584905 CGGCCCGTGAACCTGGGCAGG-------GCCGTGCGCAT-TTTGGGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 53792 36 + 100774 C-GCCCG-GAACCTGGGCAGG-------GCCGTGCGCA--TTTGGGT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 13166 39 - 218577 CGGCCCGCGAACCTGGGCAGG-------GCCGTGCGCAT-TTTGGGC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1384076 39 + 91010382 CAGCCCGCGAACCTGGGCGGG-------GCCGTGCGCAT-TTTGGGC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 49070 39 + 74206 CGGCCTGCGAACCTGGGCAGG-------GCCGTGCGCGT-TTTGGGC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 785192 39 - 1687011 CAGCCCGCGAACCTGGGCGGG-------GCCGTGCGCGT-TCTGGGC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204150338 31 + 204313951 CAGCCTGCAGACCTGGGTGGG-------GCGGGGC---------GGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16292995 39 + 16417988 CAGCCTGCAGACCTGGGTGGG-------GCCATGTGGAT-GTCGGGC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 78287 38 - 306014 CAGCCTG-AGGCCTGGGTGGG-------GCCGTGTGGGT-GTCGGGC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 123476 39 - 211231 CAGCCTGCAGACCTGGGTGGG-------GCCGTGTGGGT-GCCGGGC i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74323792 30 + 120421639 -------CAAAT---AGAGTG-------GCTCAGCACATCCCTGGGC i mm10.chr13 C 0 C 0 s canFam3.chr34 11937252 37 + 42124431 --TCTAGAATATATGGGACGGCACA---GTCATTAGTGC-ATC---- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 350744 38 - 913073 TGAGCCGCAGAACAGGACGAACACCACTGCGGTGCAGC--------- i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 2110798 303 - 2165740 I e rheMac8.chr6 179828562 33 - 180051392 I a score=158289.000000 s hg38.chr3_KI270934v1_alt 109069 19 + 163458 TGTGGTGAGAACGAGCTCC s panTro5.chr3 2579461 19 - 202621043 TGTGGTGAGAAAGAGCTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 166698 19 - 190779 TGTGGTGAGAAAGAGCTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 1819 19 + 880730 TGTGGTGAGAACGAGCTCC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2890752 19 - 123690457 TGTGGTGAGAACAAGCTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179828595 17 - 180051392 TGTGGTGAGAAC--ATTCC i rheMac8.chr6 I 33 C 0 s macFas5.chr6 1289989 19 + 181584905 TGTGGTGAGAACGAGCTCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 53828 19 + 100774 TGTGGTGAGAACGAGCTCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 13205 19 - 218577 TGTGGTGAGAACGAGCTCC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1384115 19 + 91010382 TGTGGTGAGAACCAGCTCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 49109 19 + 74206 TGTGGTGAGAACGAGCTCC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 785231 19 - 1687011 TGTGGTGAGAACGAGCTCC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204150369 19 + 204313951 TGTGGTGAGAACAAAGTCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16293034 19 + 16417988 TGTGGTGAGAACGAAGTCC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 78325 19 - 306014 TGTGGCGAGAACAAAGTCC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 123515 19 - 211231 CGTGGTGAGAACAAAGTCC i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74323822 10 + 120421639 --TGATGCATGC------- i mm10.chr13 C 0 C 0 s canFam3.chr34 11937289 19 + 42124431 CGTGAGCAGGACACGTTCC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 350782 10 - 913073 ---TGCGGGCACT------ i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 2110798 303 - 2165740 I a score=2190842.000000 s hg38.chr3_KI270934v1_alt 109088 155 + 163458 ACACTG-ACCTTCCCAGTGCCGAC-GTCCACATAGGACAGGGTGTGCTTCCTCCAGT-GCACCTCAAAGGGCTTCTTCTGTTGCCCCTGGATGGGCTTGGAGTGATCATACTCA---TCAAT-CTGCACCTGAGGCCAG--------------------A----------------------AACACCA------------TCAC--------------ATTTCTCATTA s panTro5.chr3 2579480 155 - 202621043 ACACTG-ACCTTCCCAGTGCTGAC-GTCCACATAGGACAGGGTGTGCTTCCTCCAGT-GCTCCTCAAAGGGCTTCTTCTGTTGCCCCTGGATGGGCTTGGAGTGATCGTACTCA---TCGAT-CCGCACCTGAGGCCAG--------------------A----------------------AACACCA------------TCAC--------------ATTTCTCATTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 166717 155 - 190779 ACACTG-ACCTTCCCAGTGCTGAC-GTCCACATAGGACAGGGTGTGCTTCCTCCAGT-GCTCCTCAAAGGGCTTCTTCTGTTGCCCCTGGATGGGCTTGGAGTGATCGTACTCA---TCGAT-CCGCACCTGAGGCCAG--------------------A----------------------AACACCA------------TCAC--------------ATTTCTCATTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 1838 157 + 880730 ACACTG-ACCTTCCCAGTGCTGAC-GTCCACATAGGACAGGGTGTGCTTCCTCTAGT-GCTCCTCAAAGGGCTTCTTCTGTTGCCCCTGCATGGGCTTGGAGTGATCATACTCA---TCAATCCCGCACCTGAGGCCAG--------------------A----------------------AACACCA------------TCAC-------------AATTTCTCATTA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2890771 155 - 123690457 ACACTG-ACCTTCCCAGTGCTGAC-GTCCAAATAGGACAGGGTGTGCTTCCTCCAGT-GCTTCTCAAAGGGCTTCTTCTGTTTCCCCTCGATGGGCTTGGAGTGATCGCACTCA---TTAAT-CCACACCTGACGCCAG--------------------A----------------------AACACCA------------TCAC--------------ATTTCTCATTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179828612 155 - 180051392 ACACTG-ACCTTCCCAGTGCTGAC-GTCCACATAGGACAGGGTGTGCTTCCTCCAGT-GCTCCTCAAAAGGCTTCTTCTGTTGCCCCTGGATGGGCTTGGAGTAATCGTACTCA---TCAAT-CCGCACCTGAGGCCAG--------------------A----------------------AACACCA------------TCAC--------------ATATCTTATTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1290008 155 + 181584905 ACACTG-ACCTTCCCAGTGCTGAC-GTCCACATAGGACAGGGTGTGCTTCCTCCAGT-GCTCCTCAAAAGGCTTCTTCTGTTGCCCCTGGATGGGCTTGGAGTAATCGTACTCA---TCAAT-CCGCACCTGAGGCCAG--------------------A----------------------AACACCA------------TCAC--------------ATATCTTATTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 53847 159 + 100774 ACACTG-ACCTTCCCAGTGCTGACGGTCCACATAGGACAGGGTGTGCTT-CTCCAGTGGCTCCTCAAAAGGCTTCTTCTGTTGCCCCTGGATGGTCCTTGAGTAATGCTACTCAATCCAAAT-CCGCACCTGAGGCCAG--------------------A----------------------AACACCA------------TCAC--------------ATATCTTATTA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 13224 155 - 218577 ACACTG-ACCTTCCCAGTGCTGAC-GTCCACATAGGACAGGGTGTGCTTCCTCCAGT-GCTCCTCAAAGGGCTTCTTCTGTTGCCCCTGGATGGGCTTGGAGTAATCGTACTCA---TCAAT-CCGCACCTGAGGCCAG--------------------A----------------------AACACCA------------TCAC--------------ATATCTTATTA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1384134 155 + 91010382 ACACTG-ACCTTCCCAGTGCTGAC-GTCCACGTAGGACAGGGTGTGCTTCCTCCAGT-GCTCCTCAAAGGGCTTCTTCTGTTGCCCCTGGATGGGCTTGGAGTAATCGTACTCA---TCAAT-CCGCACCTGAGGCCAG--------------------A----------------------AACACCA------------TCAC--------------GTATCTTATTA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 49128 155 + 74206 ACACTG-ACCTTCCCAGTGCTGAC-GTCCACATATGACAGGGTGTGCTTCCTCCAGT-GCTCCTCAAAGGGCTTCTTCTGTTGCCCCTGGATGGGCTTGGAGTAATCGTACTCA---TCAAT-CCGCACCTGAGGCCAG--------------------A----------------------AACACCA------------TCAC--------------ATATCTTATTA i manLeu1.NW_012101728v1 C 0 M 4520 s colAng1.NW_012116910v1 785250 155 - 1687011 ACACTG-ACCTTCCCAGTGCTGAT-GTCCACGTAGGACAGGGTGTGCTTCCTCCAGT-GCTCCTCAAAGGGCTTCTTCTGTTGCCCCTGGATGGGCTTGGAGTAATCGTACTCA---TCAAT-CCGCACCTGAGGCCAG--------------------A----------------------AACACCA------------TCAC--------------ATATCTCATTA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204150388 155 + 204313951 ACACTG-ACCTTCCCAGTGCCCAC-GTCCACATAGGACAGGGTGTGCTTCCTCCAGT-GCTCCTCAAAGGGCTTCTTCTGTTGCCCCTGGATGGGTTTGGAGTAATCGTACTCA---TCAAT-CCGCACCTGAGGCCAG--------------------A----------------------AACACCA------------TCAC--------------ATTTCTTATTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16293053 155 + 16417988 ACACTG-ACCTTCCCAGTGCCCAC-GTCCACATAGGACAGGGTGTGCTTCCTCCAGT-GCTCCTCAAAGGGCTTCTTCTGTTGCCCCTGGATGGGCTTGGAGTAATCATACTCA---TCAAT-CCGCACCTGAGGCCAG--------------------A----------------------AACACCA------------TCAC--------------ATTTCTTATTA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 78344 155 - 306014 ACACTG-ACCTTCCCAGTGCCCAC-GTCCACATAGGACAGGGTGTGCTTCCTCCAGT-GCTCCTCAAAGGGCTTCTTCTGTTGCCCCTGGATGGGCTTGGAGTAATCATACTCA---TCAAT-CCGCACCTGAGGCCAG--------------------A----------------------AACACCA------------TCAC--------------ATTTCTTATTA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 123534 155 - 211231 ACACTG-ACCTTCCCAGTGCCCAC-GTCCACATAGGACAGGGTGTGCTTCCTCCAGT-GCTCCTCGAAGGGCTTCTTCTGTTGCCCCTGAACGGGCTTGGAGTAATCGTACTCA---TCGAT-CCGCACCTGAGGCCAG--------------------A----------------------AACACCA------------TCAC--------------ATTTCTTATCA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2111101 152 - 2165740 GCACTGTACCTTGCCAGTGCTCAC-ATCAACGTAAGAAAGGGTGTGCTTCCTCCAAT-GCTCCCCAAAGGGCTTCTTCTGCTGTCCTTGGATGGGCTTGGAATAATCATACTCG---TCAAT-CCGCACCTG-GGCCAG--------------------A----------------------AATGCCA------------ACAC--------------ACTTCTTA--- i otoGar3.GL873745 I 303 C 0 s mm10.chr13 74323832 152 + 120421639 CCACAT-ACCTTGCCAGTCTTGAT-GTCCACATATGAGAGGGTGTGCTTCCTCCAGT-GTTCCCCAAACGGCTTCTTCTGCTGTCCCTGGATGGGCTTGGAGTAATCATACTCA---TCGAC-CCGCACCTGAGG-TAA--------------------A----------------------AACATAC------------CTCC--------------ATCTCTCAC-- i mm10.chr13 C 0 C 0 s canFam3.chr34 11937308 189 + 42124431 CCACAT-ACCTTCCCAGTCTTGAT-ATCGACGTAGGAAAGGGTGTGCTTTCTCCAGT-GCTCCTCAAACGGCTTCTTCTGCTGTCCCTGGATGGGCTTAGAGTAATCATACTCG---TCAAT-CCGCACCTGAGGCCAGGGAAATTAGTTTATTTCAGAA----------------------AATACCA------------TCAACAAATACACTTCAAATTTCTTATTT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 350792 186 - 913073 GGACAT-ACCTTCCCCGTG---AC-ATCAACGTAGGAAAGGGTGTGCTTTCTCCAGT-GGTCCTTGAATGGTCTCTTCTGTTGACCTTCCAGGGGCTTAGAGTAATCGTACTCA---TCAAC-CCGTACCTAGGGCCAG--------------------AGGAAGCAAGGTCACCTCAAGTCAACACCAGACAGTTAGATTCCAA--------------ATTTCTCATTA i dasNov3.JH577625 C 0 C 0 a score=671016.000000 s hg38.chr3_KI270934v1_alt 109243 75 + 163458 CTCTAACAGAGCAATACAG--AAAAAAC--ACAGCAAA--CATTAAAATG--ATCTA---------AGAGACA-------------GATGCCCTAGAACCCATTC s panTro5.chr3 2579635 75 - 202621043 CTCCAACAGAGCAATACAG--AAAAAAC--ACAGCAAA--CATTAAAATG--ATCTA---------AGAGACA-------------GATGCCCTAGAACTCATTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 166872 75 - 190779 CTCTAACAGAGCAATACAG--AAAAAAC--ACAGCAAA--CATTAAAATG--ATCTA---------AGAGACA-------------GATGCCCTAGAACTCATTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 1995 74 + 880730 CTCTAACAGAGCAATACAG--AAAAAAC--ACAGCAAA--CATTAAAATG--ATCTA---------AGAGACA-------------GATG-CCTAGAACTCATTC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2890926 75 - 123690457 CTCTAACAGAGCAACACAG--AAAAAAC--ACAGCAAA--CATTAAAATG--ATCTA---------AGAGACA-------------GATGCCCTAGAACTCATTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179828767 75 - 180051392 CTCTAACAGAGCAATACAG--AAAAAAC--ACAGCAAA--CATTAAAATG--ATCTA---------AGAGACA-------------GATGCCCTAGAACTCATTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1290163 75 + 181584905 CTCTAACAGAGCAATACAG--AAAAAAC--ACAGCAAA--CATTAAAATG--ATCTA---------AGAGACA-------------GATGCCCTAGAACTCATTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 54006 75 + 100774 CTCTAACAGAGCAATACAG--AAAAAAC--ACAGCAAA--CATTAAAATG--ATCTA---------AGAGACA-------------GATGCCCTAGAACTCATTC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 13379 75 - 218577 TTCTAACAGAGCAATACAG--AAAAAAC--ACAGGAAA--CATTAAAATG--ATCTA---------AGAGACA-------------GATGCCCTAGAACTCATTC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1384289 75 + 91010382 CTCTAACAGAGCAATACAG--AAAAAAC--ACAGCAAA--CATTAAAATG--ATCTA---------AGAGACA-------------GATGCCCTAGAACTCATTC i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 785405 75 - 1687011 CTCTAACAGAGCAATACAG--AAAAAAC--ACAGCAAA--CATTAAAATG--ATCTA---------AGAGACA-------------GACGCCCTAGAACTCATTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204150543 74 + 204313951 CTCTAACAGAGCAATACAG---AAAAAC--ACAGCAAA--CATTAAAATG--ACGTA---------AGAGACA-------------CATGGCCTAGAACTCATTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16293208 74 + 16417988 CTCTAATGGAGCAATACAG---AGAAAC--ACAGCAAA--CACCAAAATG--ACCTA---------AGAGACA-------------CATGGCCTAGAACTCATTC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 78499 74 - 306014 CTCTAACAGAGCAATACAG---AGAAAC--ACAGCAAA--CACTAAAATG--ACGTA---------AGAGACA-------------CAAGGCCTAGAACTCATCC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 123689 73 - 211231 GTCTAACAGAGCAATACAG---AGAAAC--ACAGCAAA--CATTGAAATG--ATGTA---------AGAGACA-------------CATGG-CTAGAACTCATTC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2111253 84 - 2165740 CTCCAAC--AGCAATGTAATCAGCAAAC--ATGTCTAG--CATTGAAACT--ACACACATAAGACCAGCCTCC-------------CATACCCCAGGACCTCTTC i otoGar3.GL873745 C 0 I 6 s mm10.chr13 74323984 45 + 120421639 ------CAGAGAACAACAC--TAAAACC--ACAGAAAA--TATTAAAG------------------ATGCACA-------------GA----------------- i mm10.chr13 C 0 C 0 s canFam3.chr34 11937497 92 + 42124431 CTCTAATAGGGCAATATAACTGGAAAAC--ATGGCAAACTCATTAAAATG--ATACA---------TGAGAGACTAGTCTGATGTGAATCCCCTGGATCCCACTC i canFam3.chr34 C 0 I 1614 s dasNov3.JH577625 350978 81 - 913073 GTCTAGTGGAGCAGTCTAA--AGAGATCAAATGGCAAGCTCATTAAAACGACACTTG---------TGAGGCT-------------GGTCTGACATGTCTCACCC i dasNov3.JH577625 C 0 C 0 e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=284684.000000 s hg38.chr3_KI270934v1_alt 109318 36 + 163458 CATTTCCACTTCAGCCCAGGAGGTTGGCA-CCATCAA s panTro5.chr3 2579710 36 - 202621043 CATTTCCACTTCAGCCCAGGAGGTTGGCA-CCATCAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 166947 36 - 190779 CATTTCCACTTCAGCCCAGGAGGTTGGCA-CCATCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 2069 35 + 880730 CATTTCCACTTCAG-CCAGGAGGTTGGCA-CCATCAA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2891001 36 - 123690457 CATTTCCACTTCAGCCCAGGAGGTTGGCA-CCATCAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179828842 29 - 180051392 CATTTCCACTTCAGCCC-------CGGCA-CCATCAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1290238 29 + 181584905 CATTTCCACTTCAGCCC-------CGGCA-CCATCAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 54081 29 + 100774 CATTTCCACTTCAGCCC-------CGGCA-CCATCAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 13454 29 - 218577 CATTTCCACTTCAGCCC-------CGGCA-CCATCAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1384364 29 + 91010382 CATTTCCACATCAGCCC-------CGGCA-CCATCAA i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 785480 29 - 1687011 CATTTCCACTTCAGCCC-------TGGCA-CCATCAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204150617 36 + 204313951 CATTTTCACTTCAGCCCAGGAGGCTGGCA-CCATCAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16293282 36 + 16417988 CATTTCCACTTCAGCCCAGGAGGTTGGCA-CCATCAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 78573 36 - 306014 CATTTCCACTTCAGCCCAGGAGGTTGGCA-CCATCAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 123762 36 - 211231 CATTTCCACTTCAGCCCAGGAGGTTGGCA-CCATCAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2111343 36 - 2165740 CATGTTCACTTTAGCGGATGAAGCTGGCA-CCATTGA i otoGar3.GL873745 I 6 C 0 s mm10.chr13 74324029 25 + 120421639 CA----------AGCCCAGGAAGTAAACA-CTAT-GA i mm10.chr13 C 0 C 0 s dasNov3.JH577625 351059 35 - 913073 CAAATC--CTACAACCTATGAGGTCTGTATTCATCAA i dasNov3.JH577625 C 0 I 1562 e canFam3.chr34 11937589 1614 + 42124431 I e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=1443433.000000 s hg38.chr3_KI270934v1_alt 109354 177 + 163458 CACG-TTCAGAACCCACAGAGGCCACATGGCTGGCCA-GCGATGTGCAGCCAGCAG--TGAGTCCAGAGTA----ATCCATGTCCGCATGTTCCCTTAGAC---ATCCTTTATGTACCTA--AGAGTT---TATCAAATAc----tttgtc-tttttgctccaagcgctgggaga-------ctacctcca-tcttttctttcagc s panTro5.chr3 2579746 177 - 202621043 CACG-TTCAGAACCCACAGAGGCCACATGGCTGGCCA-GCGATGTGCAGCCAGCAG--TGAGTCCAGAGTA----ATCCATGTCCGCATGTTCCCTTAGAC---ATCCTTTATGTACCTA--AGAGTT---TATCAAATAc----tttgtc-tttttgctccaagcgctgggaga-------ctacctcca-tcttttctttcagc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 166983 177 - 190779 CACG-TTCAGAACGCACACAGGCCACATGGCTGGCCA-GCGATGTGCAGCCAGCAG--TGAGTCCAGAGTA----ATCCATGTCCGCATGTTCCCTTAGAC---ATCCTTTATGTACCTA--AGAGTT---TATCAAATAc----tttgtc-tttttgctccaagcgctgggaga-------ctacctcca-tcttttctttcagc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 2104 180 + 880730 CACGTTTCAGAACGCACAGAGGCCACATGGCTGGCCA-GCGATGTGCAGCCAGCAGT-TGAGTCCAGAGTA----ATCCATGTCCGCATGTTCCCTTAGAC---ATCCTTGATGTACCTT--AGAGTT---TATCAAATAC----TTTGTCTTTTTTGCTCCAAGTGCTGGGAGA-------CTACCTCAA-TCCTTTCTTTCAGC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2891037 177 - 123690457 CAGG-TTCAGAACCCACAGAGGACACATGGGTGGCCA-GGGGTGTGCAGCCAGCAG--CGAGTCCAGAGTA----ATCCATGTCCGCATGTTCCCTTAGAC---ATCCTTTATGTACCTA--AGAGTT---TATCAAATAC----TTTGTC-TTTTTGCTCCATGCACTAGGAAA-------CTACCTCAA-TCCTTTCTTTCAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179828871 185 - 180051392 CATG-TTCAGAACCCACGGAGGCCACATGGCTGGTCGGGGGGTGTGCAGCCAGCAG--TGAGTCCAGAGTA----ATCCGTGTCCGCACGTTCCCTTAGAC---ACCCTTTATGTACCTA--AGAGTT---TACCAAATAC----TTTGTC-TTTCTGCTGCATGCGCTGGGAGACTACCTACTACCTCAA-TCTTTTCTTTCAGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1290267 185 + 181584905 CATG-TTCAGAACCCAAGGAGGCCACATGGCTGGTCAGGGGGTGTGCAGCCAGCAG--TGAGTCCAGAGTA----ATCCGTGTCCGCACGTTCCCTTAGAC---ACCCTTTATGTACCTA--AGAGTT---TACCAAATAC----TTTGTC-TTTCTGCTGCATGCGCTGGGAGACTACCTACTACCTCAA-TCTTTTCTTTCAGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 54110 185 + 100774 CATG-TTCAGAACCCAAGGAGGCCACATGGCTGGTCAGGGGGTGTGCAGCCAGCAG--TGAGTCCAGAGTA----ATCCGTGTCCGCACGTTCCCTTAGAC---ACCCTTTATGTACCTA--AGAGTT---TACCAAATAC----TTTGTC-TTTCTGCTGCTTGCGCTGGGAGACTACCTACTACCTCAA-TCTTTTCTTTCAGC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 13483 181 - 218577 CATG-TTCAGAACCCACGGAGGCCACATGGCTGGTCGGGGGATGTGCAGCCAGCAG--TGAGTCCAGAGTA----ATCCGTGTCCGCACGTTCCCTTAGAC---ACCCTTTATGTACCTA--AGAGTT---TACC----AC----TTTGTC-TTTCTGCTGCATGCGCTGGGAGACTACCTTCTACCTCAA-TCTTTTCTTTCAGC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1384393 185 + 91010382 CATG-TTCAGAACCCACGGAGGCCACATGGCTGGCCAGGGGGTGTGCAGCCAGCAG--TGAGTCCAGAGGA----ATCCGTGTCCGCACGTTCCCTCAGAC---ACCCTTTATGTACCTG--AGAGTT---CACCAAATAC----TTTGTC-TTTCTGCTGCACGCGCTGGGGGACTACCTACTACCTCCA-TCTTCTCTTTCAGC i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 785509 185 - 1687011 CATG-TTCAGAACCCACGGAGGCCACATGGCTGGCCAGGGGGTGTGCAGCCAGCAG--TGAGTCCAGAGTA----ATCCGTGTCCACATGTTCCCTTAGAC---ATCCTTTATGTACCTA--AGAGTT---TACCAAATAC----TTTGTC-TTTTTGCTGCATGCGCTGGGAGACTACCTACTACCTCAA-TCTTTTCTTTCAGC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204150653 174 + 204313951 CATG-CTCAGAATCCACTGAGGCCACATAGCTGGTCA-GCG--GTGCAGCCAGCAG--TGAGTCCAGGGTA----ATCCATGCCTGCATTTTCCC-TAGAC---ATCCTTCATGTACCTA--AGAGTT---TATCAGATAC----TTTGTC-TTTTTACCCCATGCTCTGGGTGA-------CCACCTCAA-TCTTTTCTTTCAGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16293318 175 + 16417988 CATG-CTCCAAATCCACTGAGGCCACGTGGCTGGCCA-GTG--GTGAGGTCAGCAG--TGAGTCTAGAGTA----ATCCATGCCTGCATTTTCCCTTAGAC---ATCCTTCATGTACCTA--AGAGTT---TATCGGATAc----tttgtc-tttttactccatgctctgggaga-------ctacctcaa-ccatttctttcagc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 78609 171 - 306014 CATG-CTCCGAATCCA--GGGGCCACATGGCTGGCCA-GCG--GTGCAGCCAGCAG--TGAGTCCAGAGTA----ATCCATGCCCGCATTTTCCCTTAGAC---ATCCTTCATGTACCTA--AGAGTT---TATCAGATAC----TTTGAC-TTTTTACTCCATGCTCTGGGAGA-------CTAC--CAA-CCTTTTCTTTCAGC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 123798 174 - 211231 CGTG-CTCCGAATCCACTGAGGCCACATGGCTGGCCA-GCG--GTGCAGCCAGCGG--TGAGTCCAGAGTA----ACCCATGCCTGCATTTTCCCTTAGAT---ATCCTCCATGGACCTA--GGGG-T---TATCAGATAC----TGTGTC-TTCTTACTCCATGCTCCGGGAGA-------CGACCTCAA-TCTGTTCTTTCAGC i aotNan1.NW_018494784v1 C 0 I 153 s otoGar3.GL873745 2111379 174 - 2165740 CAAG-TTCAGAACCTACCAAGGCTATAAAGCTGGTCA-GAAGTTTGAAGCCAGCAGTGTGGGTCCTGAGTA----ATCCATTTCTGTATTTTCTATTAGATAAAATCCTTTATGTACCTC--AAAGTT---TG-------------TTGTT-TTTTTACTCTGTACTCTGGGAGA-------CTGCCTCAACCCTTTTCTTTCTGT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74324054 152 + 120421639 CAAA----------------------------------GGGCTTTAGAGCCAGGAA--TG---CAAATGTACAACATCCACTTCTGCATTTTCTCTCACA----GCTCTGTAAGTAGATATTAGAATTAAATATCACTTACGTCATTTTTC-CTTTGACTCCATGCACTGAGA---------TTTCGTCAG-CTTTTCTCTTCAGC i mm10.chr13 C 0 C 0 e dasNov3.JH577625 351094 1562 - 913073 I e canFam3.chr34 11937589 1614 + 42124431 I e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=88578.000000 s hg38.chr3_KI270934v1_alt 109531 14 + 163458 ctgttttta--ttaaA s panTro5.chr3 2579923 14 - 202621043 ctgttttta--ttaaA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 167160 14 - 190779 ctgttttta--ttaaA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 2284 14 + 880730 CTGTTTTTA--TTAAA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2891214 14 - 123690457 CTGTTTTTA--TTAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179829056 15 - 180051392 CTGTTTTTA-TTTAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1290452 15 + 181584905 CTGTTTTTA-TTTAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 54295 15 + 100774 CTGTTTTTA-TTTAAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 13664 16 - 218577 CTGtttttatttttaa i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1384578 15 + 91010382 CTGTTTTTA-TTTAAA i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 785694 15 - 1687011 CTGTTTTTA-TTTTAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204150827 15 + 204313951 ATGTTTCTA-TTTTTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16293493 15 + 16417988 gtgtttcta-ttTAAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 78780 15 - 306014 ATGTTTCTA-TTTAAA i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2111553 14 - 2165740 -TTGCTTTA-TTTAAA i otoGar3.GL873745 C 0 I 381 s mm10.chr13 74324206 14 + 120421639 --ATTTTTAATTTAAA i mm10.chr13 C 0 C 0 e aotNan1.NW_018494784v1 123972 153 - 211231 I e dasNov3.JH577625 351094 1562 - 913073 I e canFam3.chr34 11937589 1614 + 42124431 I e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=-36242.000000 s hg38.chr3_KI270934v1_alt 109545 8 + 163458 AACAC----------ttt s panTro5.chr3 2579937 8 - 202621043 AACAC----------ttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 167174 8 - 190779 AACAC----------ttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 2298 8 + 880730 AACAC----------ttt i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2891228 5 - 123690457 GAAA-------------t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179829071 5 - 180051392 AACAt------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1290467 5 + 181584905 AACAt------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 54310 5 + 100774 AAAAA------------- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 13680 5 - 218577 aacat------------- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1384593 9 + 91010382 AAAAA---------Cttg i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 785709 9 - 1687011 AAAAA---------ttgt i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204150842 6 + 204313951 AAAAAA------------ i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 16293508 12 + 16417988 AAAAAAAAAttc------ i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 78795 5 - 306014 AAAAA------------- i cebCap1.NW_016108150v1 C 0 I 1 s mm10.chr13 74324220 8 + 120421639 ----------TGGGCttt i mm10.chr13 C 0 C 0 e aotNan1.NW_018494784v1 123972 153 - 211231 I e dasNov3.JH577625 351094 1562 - 913073 I e canFam3.chr34 11937589 1614 + 42124431 I e otoGar3.GL873745 2111567 381 - 2165740 I e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=347971.000000 s hg38.chr3_KI270934v1_alt 109553 41 + 163458 ttttctcttttgagacagggtctcgctatgtcacctgggct s panTro5.chr3 2579945 40 - 202621043 tttt-tcttttgagacagggtctcgctatgtcacctgggct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 167182 40 - 190779 tttt-ccttttgagacagggtctcgctatgtcacctgggct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 2306 40 + 880730 tttt-ttctttgagacagggtctcgctatgtcacctgggct i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2891233 40 - 123690457 tttt-tcttttgagacagggtctcgctatgtcacctgggct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179829076 40 - 180051392 tttt-tcttttgagacaggctctcgcaatgtcacccaggct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1290472 40 + 181584905 tttt-tcttttgagataggctctcgcaatgtcacccaggct i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 54315 40 + 100774 tttt-tcttttgagacaggctctcgcaatgtcacccaggct i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 13685 40 - 218577 tttt-tcttttgagacaggctctcgcaatgtcacccgggct i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1384602 40 + 91010382 tttt-tcttttgagacaggctctcgctatgtcacccaggct i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 785718 40 - 1687011 tttt-tcttttgagacaggctctcgctatgtcacctgggct i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204150849 40 + 204313951 tctt-tcttttgagacaggatctcgctatgtcacgtgggct i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 16293521 40 + 16417988 tttt-tcttttgagacagggtctcgctatgtcacgtgggct i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 78801 38 - 306014 tctt---ttttgagacagggtctcactgtgtcacgtggact i cebCap1.NW_016108150v1 I 1 C 0 s aotNan1.NW_018494784v1 124125 40 - 211231 tttt-tcttttgagacggggtctcgctatgtcccgtgggct i aotNan1.NW_018494784v1 I 153 C 0 s mm10.chr13 74324228 36 + 120421639 -----tgttttgagacagggtctctctacattgccctggct i mm10.chr13 C 0 I 581 e dasNov3.JH577625 351094 1562 - 913073 I e canFam3.chr34 11937589 1614 + 42124431 I e otoGar3.GL873745 2111567 381 - 2165740 I e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=1064136.000000 s hg38.chr3_KI270934v1_alt 109594 177 + 163458 ggagcgcaatggtgtgatcacagctcg-ccagag-ccttgacttcccgggc----tc-aatcaatcatcctgcctcagcctcctgagcagctggtacctcaggtgtgtaccaccacgcctggctaat------ttttta----atttttgtagagacaggtttcgccatgttgcccaggctggtctagaactcc s panTro5.chr3 2579985 177 - 202621043 ggagcgcaatggtgtgatcacagctcg-ccaggg-ccttgacttcccgggc----tc-aatcactcatcctgcctcagcctcctgagcagctggtacgtcaggtgtgtaccaccacgcctggctaat------ttttta----atttttgtagagacaggtttcgccatgttgcccaggctggtctagaactct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 167222 177 - 190779 ggagcgcaatggtgtgatcacagctcg-ccagag-ccttgacttcccgggc----tc-aatcactcatcctgcctcagcctcctgagcagctggtacctcaggtgtgtaccaccacgcctggctaat------ttttta----atttttgtagagacaggtttcgccatgttgcccaggctggtctagaactct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 2346 180 + 880730 ggagtgcaatggtgtgatcacagcttgcccagagcccttgacttcccgggc----tcaaatcactcatcctgcctcagcctcctgagcagctggtacgtcaggtgtgtaccaccacgcctggctaat------ttttta----atttttgtagagacaggtttcgccatgttgcccaggctggtctagaactcc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2891273 173 - 123690457 ggagtgcaatggtgtgagcacagctcg-ccggag-acttgacttcccaggc----tc-aa----tcatcttgcctcagcctcctgagcagctggtacttcaggcatgtaccaccacacctggctaat------ttttta----atttttgtagagacaggtttcgccatgttgcccaggctggtctagaagtct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179829116 150 - 180051392 ggagtgcagtggtgtgatcacagcttg-ctggag-ccttgactttccaggc----tc-aa----tcatcctgcctcagcctcct------------------gcatgtaccaccacgcctggctaat------tttttg---------tgtagagacaggtttcgccatgttgcccagcatggtctagaactcc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1290512 150 + 181584905 ggagtgcagtggtgtgatcacagcttg-ctggag-ccttgacttcccaggc----tc-aa----tcatcctgcctcagcctcct------------------gcacgtaccaccacgcctggctaat------tttttg---------tgtagagacaggtttcgccatgttgcccaggctggtctagaactcc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 54355 150 + 100774 ggagtgcagtggtgtgatcacagcttg-ctggag-ccttgacttcccaggc----tc-aa----tcatcctgcctcagcctcct------------------gcacgtaccaccacgcctggctaat------tttttg---------tgtcgagacaggtttcgccatgttgcccaggatggtctagaactcc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 13725 150 - 218577 ggagtgcagtggtgtgatcacagcttg-ctggag-ccttgacttcccgggc----tc-aa----tcatcctgcctcagcctcct------------------gcacgtaccaccacgcctggctaat------tttttg---------tgtagagacaggtttcaccatgttgcccaggctggtctagaactcc i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1384642 160 + 91010382 ggagtgcagtggtgtgatcacagctcg-ctggag-ccttgacttccccggctcaatc-aa----tcatcctgcctcagcctcct------------------gtgcgtaccaccacgcctggctaattttttatttttg---------tgtagagacaggtttcgccatgttgcccaggctggtctagaactcc i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 785758 160 - 1687011 ggagtgcagtggtgtgatcacagcttg-ctggag-ccttgacttcccgggctcaatc-aa----tcatcctgcctcagtctcct------------------gcgcgtaccaccacgcctggctaattttttatttttg---------tgtagagacaggtttcgccatgttgcccaggctggtctacaactcc i colAng1.NW_012116910v1 C 0 M 1949 s calJac3.chr2 204150889 151 + 204313951 ggagtgcagtggtgatatcacagctca-ctggag-ccttgact-tcccagc----tc-aatcactcatcctgcctcagcctcctgagcagctgg-----------------------------taat------tttttattctttttttttagagacaggttttgccatgttgcccaagctggtctagaactct i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16293561 150 + 16417988 ggagtgcagtggtgggatcacagctca-ccggag-ccttgactaccccagc----tc-aatcaaacatcct-cctcagtctcctgagcagctgg-----------------------------taat------tttttatt-ttttttttaagagacaggttttgtcatgttgcccaagctggtctagaactct i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 78839 148 - 306014 ggagtgcagtggtgggatcacagctca-ccggag-ccttgacttccccagc----tc-aatcaatcatcct-cctcagcctcctgagtagctgg-----------------------------taat------ttttta---tttttttttagaggcaggttttgccatgttgcccaagctggtctagaactct i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 124165 149 - 211231 ggagtgcagtggtgatatcacagctca-ccggag-ccttgacttccccagc----tc-aatcaatcatcctgcctcagcctcctgagcagctgg-----------------------------taat------ttttta---tttttttttagagacaggttttgccatgttgcccaagctggtctagaactcc i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74324264 581 + 120421639 I e dasNov3.JH577625 351094 1562 - 913073 I e canFam3.chr34 11937589 1614 + 42124431 I e otoGar3.GL873745 2111567 381 - 2165740 I e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=3591804.000000 s hg38.chr3_KI270934v1_alt 109771 533 + 163458 ggggctcaagtgatctgcctgcctcag-cctcccaaatgctgggattacaggtgggagccactg-cacctggcTTCTATTCTAATTAAAACTCGTTGTCA----CC-AACTAAATTTATGCTCCTggccaggcacagtggctcatgcct----gtaatcctagcactttggaaggccaaggtgggtggttcacttgaggtcgggagttcgagactagcctggccaacatggtgaaaccccgtctttactgaaaatac-aaaattagccgggcacggtggcatgcgcctgtaaccccagctgcttgggaggctgaggcaggag-aatcacttgaacctgggaggcagaggttgcagtgagctgagatcgcgccgctgcactccagcctgggggacaatgag-------actccatctcaaa---------aaatt------aaaaataataaaTTTAT--TATTATTCTGTATTCTGGCAAACACGGATTCATATACTTTGCAGGAAAGACTCTT-AATATGTATGAGGAGAC--GAGCAAATTCTGAGCAGTGATCACAGCCATCAGCATATT s panTro5.chr3 2580162 538 - 202621043 ggggctcaagtgatttgcctgcctcag-cctcccaaatgctgggattacaagtgggagccactg-cacctggcTTCTATTCTAATTAAAACTCGTTTTCA----CC-AACTAAATTTATGCTCCTggccaggcacagtggctcatgcct----gtaatcctagcactttggaaggccaaggtgggtggttcacttgaggtcggg-gtttgagaccagcccggccaacatggtgaaaccccatctccactgaaaatac-aaaattagccaggcatggtggcatgcgcctgtaaccccagctgcttgggaggctgaggcaggag-aatcacttgaacccgggaggcagaggttgcagtgagctgagatcgcgccgctgcactccagcctgggggacaatgag-------actccatctcaaa---------aaaataaaaacaaaaataataaaTTTAT--TATTATTCTGTATTCTGGCAAAAACGGATTCATATACTTTGCAGGAAAGACTCTT-AATATGTATGAGGAGAC--GAGCAAGTTCTGAGCAGTGATCACAGCCATCAGCATATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 167399 536 - 190779 ggggctcaagtgatttgcctgcctcag-cctcccaaatgctgggattacaggtgggagccactg-cacctggcTTCTATTCTAATTAAAACTCGTTGTCA----CC-AACTAAATTTATGCTCCTggccaggcacagtggctcatgcct----gtaatcctagcactttggaaggccaaggtgggtggttcacttgaggtcggg-gttcgagaccagcccggccaacatggtgaaaccccatctccactgaaaatac-aaaattagccaggcatggtggcatgcgcctgtaaccccagctgcttgggaggctgaggcaggag-aatcacttgaacccgggaggcagaggttgcagtgagctgagatcgcgccgctgcactccagcctgggggacaatgag-------actccatctcaaa---------aaaataaaa--caaaataataaaTTTAT--TATTATTCTGTATTCTGGCAAAAACGGATTCATATACTTTGCAGGAAAGACTCTT-AATATGTATGAGGAGAC--GAGCAACTTCTGAGCAGTGATCACAGCCATCAGCATATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 2526 535 + 880730 ggggctcaagtgatctgcctgcctcagccctcccaaatgttaggattacaggtgggagccactgccacctggcTTCTATTCTAATTAAAACTCGCTGTCA----CCAAACTAAATTTATGC-ACTggccgggcacagtggctgatgcct----gtaattctggcattatgggaggctgaggtgggtggttcacttgaggtcaggagttcgagacca-cccggccaacatggtgaaaccccgtctttactgaaaatac-aaaattagccgggcacggtggcacgcgcctgtaaccccagctgcttgggaggctgaggcaggagaaatcacttgaacctgggaggcagaggttgcagtgagctgagatcgcaacactgcactctagcctgggggacagtcag-------actccatctcaaa---------aaatt------aaaaataataaaTTTAT--TATTATTCTGTATTCTGGCAAACATGGATTCGTATACTTTGCAGGAAAGACTCTT-AATATGTATGAGGAGAC--GAGCAAGTTCTGAGCAGTGATCACAGCCATCACCATATT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2891446 539 - 123690457 ggggctcaagtgatctgcctgcctcag-cctcccaaatgctgggattacaggtgggagccactg-cacctggcTTCTATTCTAATTAAAACTCATTGTCA----CC-AACTAAATTTATGCTCCTggtcaggcacagtggctcctgcct----gtaatcctagcactttgggaggccaaggtgggtggttcacttgaggtcaggagttcgagaccagctcggccaacatggtgaaaccccgtctctattgaaaatgc-aaaattagccaggcatggtggcatgcgtctgtaatcccagctacttgggaggctgaggcaggag-aatcacttgaacccaggaggcagaggttgcagtgagctgagatcgcgccgctgcactccagcctgggggacagtgag-------actccatctcaaa---------aaaataaaaataaaaacaataaaTTTAT--TATTATTCTGTATTCTGGCAAAGACGGATTCATATACTTTGCAGGAAAGACTCTT-AATATGTATGAGGAGAC--GAGCAAGTTCTGAGCAGTGATCACAGCCATCAGCATATT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179829266 537 - 180051392 -aggctcaagtgatctgcctgcctcag-cctcccaaatgctgggattacaggcgtgagccactg-cacctggcTTCTATTCTAATTAAAACTCATTGTGA----CC-AACTGAATTTATACTACTggctaggcgcagtggctcacgcct----gtaatcctagcactttgggaggttgaggtaggtggttcacttgaggtcacgagttcaagaccagcccggccaacatggtgaaa-cccaactctactgaaaatac-aaaattagccaggcacggtggcgtgcgtctgtaatcccagctgcttgggaggctgaggcaggag-aatcacttgaaccctggaggcagagcttgcagtgagctgagatcgcgccattgcattccagcctgggggaca--gag-------actccatctcaaa---------aaaataaaaataaaaGTGATAAATTTAT--TATTATTCTGTATTCTGGCAAACACGGATTCATATACTTCGCAGGAAAGACTCTT-AATATGTACAAGGAGGCAAGAGCAAGTTCCGAGCAGTGATCACAGCCATCAGCATATT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1290662 537 + 181584905 -aggctcaagtgatctgcctgcctcag-cctcccaaatgctgggattagaggcgtgagccactg-cacctggcTTCTATTCTAATTAAAACTCATTGTGA----CC-AACTGAATTTATACTACTggctaggcgcagtggctcacgcct----gtaatcctagcactttgggaggttgaggtaggtggttcacttgaggtcacgagttcaagaccagcccggccaacatggtgaaa-cccaactctactgaaaatac-aaaattagccaggcacggtggcgtgcgtctgtaatcccagctgcttgggaggctgaggcaggag-aatcacttgaaccctggaggcagagcttgcagtgagctgagattgcgccattgcattccagcctgggggaca--gag-------actccatctcaaa---------aaaataaaaataaaaGTGATAAATTTAT--TATTATTCTGTATTCTGGCAAACACGGATTCATATACTTCGCAGGAAAGACTCTT-AATATGTACAAGGAGGCAAGAGCAAGTTCCGAGCAGTGATCACAGCCATCAGCATATT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 54505 538 + 100774 -aggctcaagtgatctgcctgcctcag-cctcccaaatgctgggattacaggtgtgagccactg-cacctggcTTCTATTCTAATTAAAACTCATTGTGA----CC-AACTGAATTTATACTACTggccaggcgcagtggctcacgcct----gtaatcctagcactttgggaggttgaggtaggtggttcacttgaggtcacgagttcaagaccagcccggccaacatggtgaaaccccaactctactgaaaatac-aaaattagccaggcacggtggcgtgcgtctgtaatcccagctgcttgggaggctgaggcaggag-aatcacttgaaccctggaggcagagcttgcagtgagctgagattgcgccattgcattccagcctgggggaca--gag-------actccatctcaaa---------aaaataaaaataaaaGTGATAAATTTAT--TATTATTCTGTATTCTGGCAAACACGGATTCATATACTTCGCAGGAAAGACTCTT-AATATGTACAAGGAGGCAAGAGCAAGTTCCGAGCAGTGATCACAGCCATCAGCATATT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 13875 540 - 218577 -aggctcaagtgatctgcctgcctcag-cctcccaaatgctgggattagaggcgtgagccactg-cacctggcTTCTATTCTAATTAAAACTCATTGTGA----CC-AACTGAATTTATACTACTggctaggcacagtggctcatgcct----gtaatcctagcactttgggaggttgaggtaggtggttcacttgaggtcacgagttcaagaccagcccggccaacatggtgaaaccccaactctactgaaaatac-aaaattagccaggcatggtggcatgcgtctgtaatcccacctgcttgggaggatgaggcaggag-aatcacttgaacccaggaggcagagcttgcagtgagctgagatcgcgccactgcacttcagcctgggggacagcgag-------actctatctcaaa---------aaaataaaaataaaaataataaaTTTAT--TTTTATTCTGTATTCTGGCAAACACGGATTCATATACTTTGCAGGAAAGACTCTT-AATATGTACAAGGAGGCAAGAGCAAGTTCTGAGCAGTGATCACAGCCATCAGCATATT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1384802 541 + 91010382 -gggatcaagtgatctgcctgcctcag-cctcccaaatgctgggattacaggtgtgagccactg-cacctggcTTCTATTCTAATTAAAACTTGTTGTGA----CC-AACTGAATTTATGCTACTggccaggcacagtggctcacgcct----gtaatcccagcactttgggaggccgaggtgtgtggttcacttgaggtcaggagttcaagaccagcccggccaacatggtgaaaccccaactctactgaaaatac-aaaattagccaggcatggtggcatgcatctgtaatcccacctgcttgggaggctgaggcaggag-aatcacttgaacccgggaggcagagcttgcagtgagctgagatcgcgccactgcacttcagcctgggggacagcaag-------acttcatctcaaa---------aaaataaaaataaaaattaaaaaTTTAT--TATTATTCTGTATTCTGGCAAACACGGATTCATATACTTTGCAGGAAAGACTCTTAAATATGTACAAGGAGGCAAGAGCAAGTTCTGAGCAGTGATCACAGCCATCAGCATATT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151040 515 + 204313951 ggggctcaagtgatctgcctgcctcag-cctcccaaatgctgggattataggtgtgagccactg-tgcctggcTTATATTCTAATTGAAACTTGCTGTGA----TC-CACTAAATTTATGCTACTggcagggcacagtggctcacgcct----ataatcctagcactttgggaagccaaggtgagtggtt---------------------------cctggacaacatggtgaaaccctgtctctactaaaaatacaaaaattagccaggtgtgatggtgtgcacctgtagtcctagctactcaggaggctgaggcaggag-aatcgcttgaacctgggaggtggaagttgtagtgagccaagatcgcaccactgcactccagcctaggtgaca--gagcgagactacttcatctca--------------aaaataataataataataaaTGTATGCTACTA-TCTGTATTCTGGCAAACACGGATTCATGTACTTTGCAGGAAAGACTCTT-ACACTGTACAAGGAGGA-AGAACAAGTTCTGAGCAGGGACTACAGCCATCAGCATATT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16293711 548 + 16417988 ggggctcaagtgatctgcctgcctcag-cctcccaaatgctgggattataggtgtgacccactg-tgcctggcTTATATTCTAATTAAAACTTGTTGTGA----TC-AACTAAATTTATGCTACTggcagggcatagtggctcacgcctgtaagtaatcctagcactttgggaagccaaggtaagtggttcacttgaggtcagg-gttcaagaccagcctggacaacatggtgaaatcctgtctctactaaaaatacaaaaattagccgggtgtggtggtatgcacctgtagtcctagatactcaggaggctgaggcaggag-aatcgcttgaacctgggaggtagaagttgcagtgagccaagatcgcaccactgcactccagcctgggtgaca--gagcgagcctacttcaactcaaaaataaaaataataaaataataataaTAAAAAATGTATACTACTG-TCTGTATTCTGGCAAACACAGATTCATATACTTTGCAAGAAAGACTCTT-AATATGTACAAAGAGGA-AGAACAAGTT-----------CTACAGCCATCAGCATACT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 78987 551 - 306014 ggggctcaagtgatctgcctgcctcgg-cctcccaaatgctgg------------gagccactg-tgcctggcTTATATTCTAATTAAAACTTGTTGTGACAACTA-AACTAAATTTATGCTACTggcagggcacagtggctcacgcctgtaagtaatcccagcactttgggaagccaaggtgagtggttcacttgaggtcagg-gttcacgaccagcctggacaacatggtgaaaccctgtctctactaaaaatacaaaaattagccgggtatggtggtgtgcacctgtagtcccagatactcaggaggctgaggcaggag-aatcgcttgaacctagaaggtggaagttgcaatgagccaagattgcaccactgcactccagcctgggtgaca--gagcgagactacttcatttcaaagataataacaaaataataataataaTAATAAATGTATATTACTA-TCCATATTCTGGCAAACACAGATTCATATACTTTGCAGGAAAGACTCTT-AATATGTACAAGGAGGA-AGAACAAGTTCTGAGCAGTGACTATAGCCATCAGCATATT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 124314 555 - 211231 ggggctcaagtgatctgcctgcctc-g-ccttccaaatgctgggattataggtgtgagccactg-tgcctggcTTATATTCTAATTAAAACTTGTTGTGA----TC-AACTAAATTTATGCTACTggcagggcacagtggctcacgcct----gtaatcctagcactttgggaagccaaggtgagtggttcacttgaggtcaggagttcaagaccagcctggacaacgtggtgaaaccctgtctctactaaaaatacaaaaattagccgggtgtggtggtatgtgcctgtagtcctagatactcaggaggctgaggcaggag-aatcccttgaacctgggagggggaggttgcagtgagccaagatcgcaccactgcactccagcctgggtgaca--gagcgagcctacttcatctcaaaaataataataaaaataaaataataaTAATAAATGTATGCTACTA-TCTGTATTCTGGCAAACACGGATTCATATACTTTTCAGGAAAGACTCTT-AACATGTACAAGGAAGA-AGAACAAGTTCTGAGCAGTGACTACAGCCATCAGCATATT i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74324264 581 + 120421639 I e dasNov3.JH577625 351094 1562 - 913073 I e canFam3.chr34 11937589 1614 + 42124431 I e otoGar3.GL873745 2111567 381 - 2165740 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=23157.000000 s hg38.chr3_KI270934v1_alt 110304 3 + 163458 CTA s panTro5.chr3 2580700 3 - 202621043 CTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 167935 3 - 190779 CTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3061 3 + 880730 CTA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2891985 3 - 123690457 CTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179829803 3 - 180051392 CCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291199 3 + 181584905 CCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 55043 3 + 100774 CCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 14415 3 - 218577 CCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385343 3 + 91010382 CCA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151555 3 + 204313951 CTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16294259 3 + 16417988 CTA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 79538 3 - 306014 CTA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 124869 3 - 211231 CTA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2111948 3 - 2165740 CCA i otoGar3.GL873745 I 381 C 0 e mm10.chr13 74324264 581 + 120421639 I e dasNov3.JH577625 351094 1562 - 913073 I e canFam3.chr34 11937589 1614 + 42124431 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=469061.000000 s hg38.chr3_KI270934v1_alt 110307 62 + 163458 GTGGAGGGTAAATCAGTAAAATTTCATGGTGAATAAAAAT--------------------GATTTTCCCATTCAC-TGTG-TTC s panTro5.chr3 2580703 62 - 202621043 GTGGAGGGTAAATCAGTAAAATTTCATGGTCAATAAAAAT--------------------GATTTTCCCATTCAC-CGTG-TTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 167938 62 - 190779 GTGGAGGGTAAATCAGTAAAATTTCATGGTCAATAAAAAT--------------------GATTTTCCCATTCAC-CGTG-TTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3064 63 + 880730 GTGGAGGGTAAATCAGTAAAATTTCATGGTGAATAAAAAT--------------------GATTTTCCCATTCAC-CATGTTTC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2891988 62 - 123690457 GTGGAGGGTAAATCAGTAAAATTTCATGGTGAATAAAAAT--------------------GATTTTCCCATTCAC-CGTG-TTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179829806 61 - 180051392 GTGGAGGGTAAATCGGTGAAATTTCATGGTGAATAAAAAT--------------------GA-TCTCCCACTCAC-CGCG-CTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291202 61 + 181584905 GTGGAGGGTAAATCGGTGAAATTTCATGGTGAATAAAAAT--------------------GA-TTTCCCACTCAC-CGCG-CTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 55046 61 + 100774 GTGGAGGGTAAATCGGTGAAATTTCATGGTGAATAAAAAT--------------------GA-TTTCCCACTCAC-CGCG-CTC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 14418 61 - 218577 ATGGAGGGTAAATCGGTAAAATTTCATGGTGAATAAAAAT--------------------GA-TTTCCCACTCAC-CGTG-CTC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385346 61 + 91010382 GTGGAGGGTAAATCGGTAAAATTTCATGGTGAATAAAAAT--------------------GA-TTTCCCACTCAC-CGTG-CTC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151558 62 + 204313951 GTGGAGGCTACATCAGTACCATTTCACAGTAAACACAAGT--------------------CATTTTCCCATTCAC-TGTG-TTC i calJac3.chr2 C 0 I 199 s saiBol1.JH378155 16294262 62 + 16417988 GTGGAGGGTAAATCAATAACATTTCACAGTAAATACAAGT--------------------GATTTTCCCATTCAC-TGTG-TTC i saiBol1.JH378155 C 0 I 7 s cebCap1.NW_016108150v1 79541 62 - 306014 GTGGAGGGTAAATCAGTAACATTTCACAGTAAATACAAGT--------------------GATTTTCCCATTCAC-TGTG-TTC i cebCap1.NW_016108150v1 C 0 I 1686 s aotNan1.NW_018494784v1 124872 62 - 211231 GTGGAGGGTGAATCAGTAACATTTCACAGTAAATACAAGT--------------------GATTTTCCCGTTCAC-TGTG-TTC i aotNan1.NW_018494784v1 C 0 I 205 s otoGar3.GL873745 2111951 83 - 2165740 GTGCAGGACAGATCAATAAAATTTCACAGTAAATAAAAATCTGATTTCTCCTGGTTAACCAGTCTTCTCATTCACTCATA-TTG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11939203 82 + 42124431 GTGGAGGGCAAATTAACAGAATTTCACTGTAAATCAGAACCTAATCCTCTTCCTGTAGCCAATTTCCCCATGTGC-TTCT-GTC i canFam3.chr34 I 1614 I 1 s dasNov3.JH577625 352656 83 - 913073 GTGGAAGAAAATTTAATAAAACTTCACAGTAGACCAACGCATGATTTCTCTTGCTGAGGCCATTCTCCCATTTGCCCATG-TTC i dasNov3.JH577625 I 1562 C 0 e mm10.chr13 74324264 581 + 120421639 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=338443.000000 s hg38.chr3_KI270934v1_alt 110369 80 + 163458 AGCTGACTGGAAAGGCTGCCACCAGCCGCCCACACATGGCCCTGAACC--AGCCTGTGCGCCTGCCTTGTGGAGCC-----------------------------TTTGTC s panTro5.chr3 2580765 80 - 202621043 AGCTGACTGGAAAGGCTGCCACCAGCCGCCCACACATGGTCCTGAACC--AGCCTGTGTGCCTGCCTTGTGGAGCC-----------------------------TTTGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168000 80 - 190779 AGCTGACTGGAAAGGCTGCCACCAGCCGCCCACACATGGTCCTGAACC--AGCCTGTGTGCCTGCCTTGTGGAGCC-----------------------------TTTGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3127 80 + 880730 AGCTGACTGGAAAGGCTGCCACCAGCCGCCCACACATGGTCCTGAACC--AGCCTGTGTGCCTGCCTTGTGGAGCC-----------------------------TTTGTC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2892050 78 - 123690457 AGCTGACTGGAAAGGCTGCCACCAGCTGCCCACACA--GTCCTGAACC--AGCCTGTGTGCCTGCCTTGTGGAGCC-----------------------------TTTGTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179829867 80 - 180051392 GGCGGGCTGGAAAGGTCACCAGCCGCCGCCCACACACGGTCCTGAACC--AGCCTGCGTGCCTGCCTCGTGCAGCC-----------------------------TTTGTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291263 80 + 181584905 AGCGGGCTGGAAAGGTCACCAGCCGCCGCCCACACACGGTCCTGAACC--AGCCTGTGTGCCTGCCTCGTGCAGCC-----------------------------TTTGTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 55107 80 + 100774 AGCGGGCTGGAAAGGTCACCAGCCGCCGCCCACACACGGTCCTGAACC--AGCCTGTGTGCCTGCCATGTGCAGCC-----------------------------TTTGTC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 14479 80 - 218577 AGCGGACTGGAAAGGTCACCAGCCGCCGCCCACACACGGTCCGGAACC--AGCCTGTGTGCCTGCCTTGTGCAGCC-----------------------------TTTGTC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385407 80 + 91010382 AGCTGACTGGAAAGGCTGCCGGCCGCCGCCCACACACGGTCCTGAACC--AGCCTGTGTGCCTGCCTCGTGCAGCC-----------------------------TTTGTC i chlSab2.chr4 C 0 C 0 s otoGar3.GL873745 2112034 81 - 2165740 AGCTGACTAGAAAGGCTGTTGTCAGC-AACTACATGCCATCTTGAGCCCAAGCCTGCATGTCTGGCTCTGGAAAGT-----------------------------CTTTAC i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11939286 78 + 42124431 TGCTGATGGACGAGGCTGCTACCAGC-AACATCACCTGGTCCTGGGCCAGAGCCTGTGTGTCTGGAAAGCGG---C-----------------------------TCAGGC i canFam3.chr34 I 1 C 0 s dasNov3.JH577625 352739 110 - 913073 GACTGACTGTGCAGGCTGTTATTAGC-ACCCAAACACCATCCTGAACCAAAGTCTGTATGTTTGTCTAGTACAGTTACTCAGGTATCAGCCAGAGAGTTTTTTAATTCATC i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74324264 581 + 120421639 I e aotNan1.NW_018494784v1 124934 205 - 211231 I e saiBol1.JH378155 16294324 7 + 16417988 I e calJac3.chr2 204151620 199 + 204313951 I e cebCap1.NW_016108150v1 79603 1686 - 306014 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=733616.000000 s hg38.chr3_KI270934v1_alt 110449 148 + 163458 CTTTTGCCGATGTGGTTTATCCTGAACTTGCATTTGCACCCCAAGCTTCCCTTTCCGTCG-TTTTTTGCTATCATATGTGAAAAACTCTTACCAGGCAGAATCCAACACGTG-TGCTCTGCAC-AAAAATCAGTTCATCTGAAGAACAAGT-- s panTro5.chr3 2580845 149 - 202621043 CTTTTGCCGATGTGGTTTATCCTGAACTTGCATTTGCACCCCAAGCTTCCCTTTCCGTCGTTTTTTTGCTATCATATGTGAAAAACTCTTACCAGGCAGAATCCAACACGTG-TGCTCTGCAC-AAAAATCAGTTCATCTGAAGAACAAGT-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168080 148 - 190779 CTTTTGCCGATGTGGTTTATCCTGAACTTGCATTTGCACCCCAAGCTTCCCTTTCCGTTG-TTTTTTGCTATCATATGTGAAAAACTCTTACCAGGCAGAATCCAACACGTG-TGCTCTGCAC-AAAAATCAGTTCATCTGAAGAACAAGT-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3207 149 + 880730 CTTTTGCTGATGTGGTTTATCCTGAACTTGCATTTGCACCCCAAGCTTCCCTTTCCGTCG--TTTTTGCTATCATATGTGAAAAACTCTTACCAGGCAGAATCCAACAGGTGTTGCTCTGCATAAAAAATCAGTTCATCTGAAGAACAAGT-- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2892128 148 - 123690457 CTTTTGCTGATGTGGTTTATCCGGAACTTGCATTTGCACCCCAAGCTTCCCTTTCTGTGG-TTTTTTGCTATCATATGTGAAAAACTCTTAGCAGGCAGAATCCAACATGTG-TGCTCTGCAC-AAAAATCAGTTCATCTGAAGAACAAGT-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179829947 148 - 180051392 CTTTCGCGGATGTGCTTTATCCTGAACCTGCATTTGTGCCCCGAGCTTCCCTTTCCGTGT-TTTTCTGCTATCGTATGTGAGAAACTCTTACCAGGCAGAATCCAACACGTG-TGCTCTGCAC-AAAAATCAGTTCACCTGAAGAACAAGT-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291343 148 + 181584905 CTTTCGCTGATGTGCTTTATCCTGAACCTGCATTTGTGCCCCGAGCTTCCCTTTCCGTGT-TTTTCTGCTATCGTATGTGAGAAACTCTTACCAGGCAGAATCCAACACGTG-TGCTCTGCAC-AAAAATCAGTTCACCTGAAGAACAAGT-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 55187 148 + 100774 CTTTCGCTGATGTGCTTTATCCTGAACTTGCATTTGTGCCCCGAGCTTCCCTTTCCGTGT-TTTTTTGCTATCGTATGTGAGAAACTCTTACCAGGCAGAATCCAACACGTG-TGCTCTGCAC-CAAAATCAGTTCACCTGAAGAACAAGT-- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 14559 148 - 218577 CTTTTGCTGATGTGGTTTATCCTGAACTTGCATTTGTTCCCCAAGCTTCCCTTTCCGTGT-TTTTTTGCTATCGTATGTGAAAAACTCTTACCAGGCAGAATCCAACACGTG-TGCTCTGCAC-AAAAATCAGTTCACCTGAAGAACAAGT-- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385487 140 + 91010382 CTTTTGCTGATGTGGTTTATCCTGAACTTGCATTTGTACCCCAAGCTTCCCTTTCCG---------TGCTATCATATGTGAAAAACTCTTACCAGGCAGAATCCAACACGTG-TGCTCTGCAC-AAAAATCAGTTCACCTGAAGAACAAGT-- i chlSab2.chr4 C 0 C 0 s otoGar3.GL873745 2112115 140 - 2165740 CTTCTGCTGACATAGTTTTGCCTGCACTTGGACCTGCCCCCCAAGCTTCCCTTTCCATGT-TTTTTTGCTATT-------AAATACTCTTTTCTGGCACAAT-TGACACAGG-TGCTCCCCAC-AAAAATTAGTTCATCTAAAAAATAAGT-- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74324845 122 + 120421639 CTCTAGTTGATGTG-TTCATCCTGAACTTGGAGCTACA-CCCAAGCTTCTTGT------G-TTTTTTACCACCACATGT------------------AGAATCCAACTTGTG-TGTTCTGTAC-AGACAACAGTTTGCATAAAAACCATGG-- i mm10.chr13 I 581 C 0 s canFam3.chr34 11939364 140 + 42124431 --CTTGCTGATGT--TGCATCCTGAAGTTGTATTTG-GCCTCAAGTGCCTATTTCCTTCC-CATTTTCCTGTCATACGC-TGAGTCTCTGTTCTGGAAGAATCTGAAC--TG-TACTCTGCAT-AAAAATCATGTAATTTATGGGGCACCT-- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 352849 149 - 913073 CTTTTGTTAATTTATTTTATCCTTAGCTTGCATTTGCAACCCCAGTATTCCTTTTAATGTTTTTTTTCCTACCATATGTTGAATTATCTTTTCTGGCAGGACCTAACACATG-TGCCTTGAAT-GAAAGTCAATTTATT--AAAAACAAAAAA i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 124934 205 - 211231 I e saiBol1.JH378155 16294324 7 + 16417988 I e calJac3.chr2 204151620 199 + 204313951 I e cebCap1.NW_016108150v1 79603 1686 - 306014 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=16513.000000 s hg38.chr3_KI270934v1_alt 110597 2 + 163458 GA s panTro5.chr3 2580994 2 - 202621043 GA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168228 2 - 190779 GA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3356 2 + 880730 GA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2892276 2 - 123690457 GA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179830095 2 - 180051392 GA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291491 2 + 181584905 GA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 55335 2 + 100774 GA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 14707 2 - 218577 GA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385627 2 + 91010382 GA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151819 2 + 204313951 GA i calJac3.chr2 I 199 C 0 s saiBol1.JH378155 16294331 2 + 16417988 GA i saiBol1.JH378155 I 7 C 0 s otoGar3.GL873745 2112255 2 - 2165740 GA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11939504 2 + 42124431 gg i canFam3.chr34 C 0 I 134 s dasNov3.JH577625 352998 2 - 913073 AA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74324967 0 + 120421639 C e aotNan1.NW_018494784v1 124934 205 - 211231 I e cebCap1.NW_016108150v1 79603 1686 - 306014 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=161649.000000 s hg38.chr3_KI270934v1_alt 110599 58 + 163458 CCACAGGGCAGTCTCCGTAATCAAACCACAGGA--------------------------CAGGCTCTATAATA----CCTTTTCCAAA s panTro5.chr3 2580996 58 - 202621043 CCACAGGGCAGGCTCCGTAATCAAACCACAGGA--------------------------CAGGCTCTATAATA----CCTTTTCCAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168230 58 - 190779 CCACAGGGCAGGCTCCGTAATCAAACCACAGGA--------------------------CAGGCTCTATAATA----CCTTTTCCAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3358 84 + 880730 CCACAGGGCAGGCTCCGTAATCAAACCACAGGACAGGCTCTGTAATCAAACCACAGGGCCAGGCTCTATAATA----CCTTTTCCAAA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2892278 33 - 123690457 CCACAGGG---------------------------------------------------CAGGCTCTATAATA----CCTTTTCCAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179830097 33 - 180051392 CCACAGGG---------------------------------------------------CAGGCTCTATAACA----CCTTTTCCAAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291493 33 + 181584905 CCACAGGG---------------------------------------------------CAGGCTCTATAATA----CCTTTTCCAAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 55337 33 + 100774 CCACAGGG---------------------------------------------------CAGGCTCTATAATA----CCTTTTCCAAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 14709 33 - 218577 CCACAGGG---------------------------------------------------CAGGCTCTATAATA----CCTTTTCCAAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385629 33 + 91010382 CCACAGGG---------------------------------------------------CAGGCTCTATAATA----CCTTTTCCAAA i chlSab2.chr4 C 0 I 78 s calJac3.chr2 204151821 48 + 204313951 CCCCAGGGCAGGTCACCCAAGTG------------------------------------CAGGAGCTACAACA----CCTTTCCCAGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16294333 48 + 16417988 CCCCAGGGCAGGTCACCAAAGTG------------------------------------CAGGAGCTATAAGA----CCTTTCCCAGA i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 2112257 33 - 2165740 CCGAGGAT---------------------------------------------------CAGGATCTGTAATA----CCATTTCTACA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74324967 30 + 120421639 ---CAAGG---------------------------------------------------GCAGATCTCCAATT----CCTTTTCCAAG i mm10.chr13 C 0 C 0 s dasNov3.JH577625 353000 55 - 913073 CCCCAAAA--AACCTAGTAACCAAAGAT-------------------------------CAAGATCTGTAATATTGTCCCTTTCTAAA i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 124934 205 - 211231 I e cebCap1.NW_016108150v1 79603 1686 - 306014 I e canFam3.chr34 11939506 134 + 42124431 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=59841.000000 s hg38.chr3_KI270934v1_alt 110657 13 + 163458 CCACAGGACAGGT s panTro5.chr3 2581054 13 - 202621043 CCACAGGACAGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168288 13 - 190779 CCACAGGACAGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3442 13 + 880730 CCACAGGACAGGT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2892311 13 - 123690457 CCACAGGGCAGGT i nomLeu3.chr11 C 0 I 57 s macFas5.chr6 1291526 13 + 181584905 CCACAGGGCAGGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 55370 13 + 100774 CCACAGGGCAGGT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 14742 13 - 218577 CCACAGGGCAGGT i cerAty1.NW_012004452v1 C 0 C 0 s calJac3.chr2 204151869 13 + 204313951 CCCCAGGGCGGGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16294381 13 + 16417988 CCCCAGGGCAGGT i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 2112290 1 - 2165740 --------C---- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74324997 13 + 120421639 CCTCAATACAGGT i mm10.chr13 C 0 C 0 s dasNov3.JH577625 353055 13 - 913073 CCACAGGGCAGGT i dasNov3.JH577625 C 0 I 96 e aotNan1.NW_018494784v1 124934 205 - 211231 I e cebCap1.NW_016108150v1 79603 1686 - 306014 I e canFam3.chr34 11939506 134 + 42124431 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e chlSab2.chr4 1385662 78 + 91010382 I e rheMac8.chr6 179830130 0 - 180051392 C a score=1756.000000 s hg38.chr3_KI270934v1_alt 110670 2 + 163458 TG s panTro5.chr3 2581067 2 - 202621043 TT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168301 2 - 190779 TT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3455 2 + 880730 TT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2892381 2 - 123690457 TT i nomLeu3.chr11 I 57 C 0 s macNem1.NW_012013899v1 55383 2 + 100774 CT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 14755 2 - 218577 CT i cerAty1.NW_012004452v1 C 0 C 0 s calJac3.chr2 204151882 2 + 204313951 CA i calJac3.chr2 C 0 I 20 s saiBol1.JH378155 16294394 2 + 16417988 CT i saiBol1.JH378155 C 0 C 0 s mm10.chr13 74325010 2 + 120421639 CT i mm10.chr13 C 0 C 0 e aotNan1.NW_018494784v1 124934 205 - 211231 I e dasNov3.JH577625 353068 96 - 913073 I e cebCap1.NW_016108150v1 79603 1686 - 306014 I e canFam3.chr34 11939506 134 + 42124431 I e otoGar3.GL873745 2112291 0 - 2165740 C e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e chlSab2.chr4 1385662 78 + 91010382 I e macFas5.chr6 1291539 0 + 181584905 C e rheMac8.chr6 179830130 0 - 180051392 C a score=8039.000000 s hg38.chr3_KI270934v1_alt 110672 6 + 163458 GAAACA s panTro5.chr3 2581069 6 - 202621043 GAAACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168303 6 - 190779 CAAACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3457 6 + 880730 GAAACG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2892383 6 - 123690457 GAAATG i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012013899v1 55385 6 + 100774 GAAACG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 14757 6 - 218577 GAAACG i cerAty1.NW_012004452v1 C 0 C 0 s saiBol1.JH378155 16294396 6 + 16417988 GAAATG i saiBol1.JH378155 C 0 C 0 s mm10.chr13 74325012 2 + 120421639 GA---- i mm10.chr13 C 0 C 0 e aotNan1.NW_018494784v1 124934 205 - 211231 I e dasNov3.JH577625 353068 96 - 913073 I e calJac3.chr2 204151884 20 + 204313951 I e cebCap1.NW_016108150v1 79603 1686 - 306014 I e canFam3.chr34 11939506 134 + 42124431 I e otoGar3.GL873745 2112291 0 - 2165740 C e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e chlSab2.chr4 1385662 78 + 91010382 I e macFas5.chr6 1291539 0 + 181584905 C e rheMac8.chr6 179830130 0 - 180051392 C a score=29892.000000 s hg38.chr3_KI270934v1_alt 110678 10 + 163458 GTGGCTTACT s panTro5.chr3 2581075 10 - 202621043 GTGGCTTACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168309 10 - 190779 GTGGCTTACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3463 10 + 880730 GTGGCTTACT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2892389 10 - 123690457 GTGGCTTACT i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012013899v1 55391 10 + 100774 GTGGCTTACT i macNem1.NW_012013899v1 C 0 M 1620 s cerAty1.NW_012004452v1 14763 10 - 218577 GTGGCTTACT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385740 10 + 91010382 GTGGCTTACT i chlSab2.chr4 I 78 C 0 s saiBol1.JH378155 16294402 10 + 16417988 CTGACTGACT i saiBol1.JH378155 C 0 C 0 e mm10.chr13 74325014 0 + 120421639 C e aotNan1.NW_018494784v1 124934 205 - 211231 I e dasNov3.JH577625 353068 96 - 913073 I e calJac3.chr2 204151884 20 + 204313951 I e cebCap1.NW_016108150v1 79603 1686 - 306014 I e canFam3.chr34 11939506 134 + 42124431 I e otoGar3.GL873745 2112291 0 - 2165740 C e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e macFas5.chr6 1291539 0 + 181584905 C e rheMac8.chr6 179830130 0 - 180051392 C a score=35441.000000 s hg38.chr3_KI270934v1_alt 110688 16 + 163458 CGTTATTTAGTAAACT s panTro5.chr3 2581085 16 - 202621043 CGTTATTTAGTAAACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168319 16 - 190779 CGTTATTTAGTAAACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3473 16 + 880730 CGTTACTTAATAAACT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2892399 16 - 123690457 CATTATTTAATAAACT i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004452v1 14773 16 - 218577 TGTTATTTAATAAACT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385750 16 + 91010382 TGTTATTTAATAAACT i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 16294412 16 + 16417988 CATTCTTTAATAATCT i saiBol1.JH378155 C 0 C 0 s mm10.chr13 74325014 14 + 120421639 --TGACTCAATAAGTC i mm10.chr13 C 0 C 0 e aotNan1.NW_018494784v1 124934 205 - 211231 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e calJac3.chr2 204151884 20 + 204313951 I e cebCap1.NW_016108150v1 79603 1686 - 306014 I e canFam3.chr34 11939506 134 + 42124431 I e otoGar3.GL873745 2112291 0 - 2165740 C e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e macFas5.chr6 1291539 0 + 181584905 C e rheMac8.chr6 179830130 0 - 180051392 C a score=24751.000000 s hg38.chr3_KI270934v1_alt 110704 7 + 163458 GGCATTT s panTro5.chr3 2581101 7 - 202621043 GGCATTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168335 7 - 190779 GGCATTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3489 7 + 880730 GGCATTT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2892415 7 - 123690457 GGCATTT i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004452v1 14789 7 - 218577 GGCATTT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385766 7 + 91010382 GGCATTT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151904 7 + 204313951 GACCTTT i calJac3.chr2 I 20 C 0 s saiBol1.JH378155 16294428 7 + 16417988 AGCATTT i saiBol1.JH378155 C 0 T 60 s mm10.chr13 74325028 7 + 120421639 AGCATTT i mm10.chr13 C 0 C 0 e aotNan1.NW_018494784v1 124934 205 - 211231 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e cebCap1.NW_016108150v1 79603 1686 - 306014 I e canFam3.chr34 11939506 134 + 42124431 I e otoGar3.GL873745 2112291 0 - 2165740 C e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e macFas5.chr6 1291539 0 + 181584905 C e rheMac8.chr6 179830130 0 - 180051392 C a score=9226.000000 s hg38.chr3_KI270934v1_alt 110711 3 + 163458 CCT s panTro5.chr3 2581108 3 - 202621043 CCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168342 3 - 190779 CCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3496 3 + 880730 CCT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2892422 3 - 123690457 ACT i nomLeu3.chr11 C 0 T 114 s cerAty1.NW_012004452v1 14796 3 - 218577 CCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385773 3 + 91010382 CCT i chlSab2.chr4 C 0 T 114 s calJac3.chr2 204151911 3 + 204313951 CCC i calJac3.chr2 C 0 I 3 s saiBol1.JH378155 16294375 3 + 16417988 CCC i saiBol1.JH378155 T 60 I 3 s mm10.chr13 74325035 3 + 120421639 CCT i mm10.chr13 C 0 I 1716 e aotNan1.NW_018494784v1 124934 205 - 211231 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e cebCap1.NW_016108150v1 79603 1686 - 306014 I e canFam3.chr34 11939506 134 + 42124431 I e otoGar3.GL873745 2112291 0 - 2165740 C e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e macFas5.chr6 1291539 0 + 181584905 C e rheMac8.chr6 179830130 0 - 180051392 C a score=16197.000000 s hg38.chr3_KI270934v1_alt 110714 6 + 163458 CCACAA s panTro5.chr3 2581111 6 - 202621043 CCACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168345 6 - 190779 CCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3499 6 + 880730 CCACAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2892311 6 - 123690457 CCACAG i nomLeu3.chr11 T 114 C 0 s cerAty1.NW_012004452v1 14799 6 - 218577 CCACAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385662 6 + 91010382 CCACAG i chlSab2.chr4 T 114 C 0 s calJac3.chr2 204151917 6 + 204313951 CCCCAG i calJac3.chr2 I 3 C 0 s saiBol1.JH378155 16294381 6 + 16417988 CCCCAG i saiBol1.JH378155 I 3 C 0 s otoGar3.GL873745 2112291 4 - 2165740 --ATGA i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74325038 1716 + 120421639 I e aotNan1.NW_018494784v1 124934 205 - 211231 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e cebCap1.NW_016108150v1 79603 1686 - 306014 I e canFam3.chr34 11939506 134 + 42124431 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e macFas5.chr6 1291539 0 + 181584905 C e rheMac8.chr6 179830130 0 - 180051392 C a score=82830.000000 s hg38.chr3_KI270934v1_alt 110720 30 + 163458 GGCAGGTCTGAAACGGTGACTTACTTGTTA s panTro5.chr3 2581117 19 - 202621043 GGCAGGTCTGAAACGGTGA----------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168351 19 - 190779 GGCAGGTCTGAAACGGTGA----------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3505 30 + 880730 GGCAGGCTTGAAACGGTGGCTTACTCGTTA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2892317 30 - 123690457 GGCAGGTCTGAAACGGTGGCTTACTCGTTA i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004452v1 14805 30 - 218577 GGCAGGTCTGAAACGGTGGCTTACTCGTTA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385668 30 + 91010382 GGCAGGTCTGAAACGGTGGCTTACTCGTTA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151923 30 + 204313951 GGCAGGTCTGAAAGGATGACTGACTCATTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16294387 30 + 16417988 GGCAGGTCTGAAATGCTGACTGACTCATTC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 81289 30 - 306014 GGCAGGTCTGAAATGATGACTAACTCATTC i cebCap1.NW_016108150v1 I 1686 C 0 s otoGar3.GL873745 2112295 16 - 2165740 GGCAGGTCTGAAATGA-------------- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74325038 1716 + 120421639 I e aotNan1.NW_018494784v1 124934 205 - 211231 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e canFam3.chr34 11939506 134 + 42124431 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e macFas5.chr6 1291539 0 + 181584905 C e rheMac8.chr6 179830130 0 - 180051392 C a score=31041.000000 s hg38.chr3_KI270934v1_alt 110750 18 + 163458 TTTAATAAACTGGCATTT s gorGor5.CYUI01015759v1 3535 18 + 880730 TTTAATAAACTGGCATTT i gorGor5.CYUI01015759v1 C 0 I 1 s nomLeu3.chr11 2892347 18 - 123690457 TTTAATAAACTGGCATTT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr4 1385698 18 + 91010382 TTTAATAAACTGGCATTT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151953 18 + 204313951 TTTAAGAAACTAGCATTT i calJac3.chr2 C 0 T 54 s saiBol1.JH378155 16294417 18 + 16417988 TTTAATAATCTAGCATTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 81319 18 - 306014 TTTAATAAACTAGCATTT i cebCap1.NW_016108150v1 C 0 C 0 e mm10.chr13 74325038 1716 + 120421639 I e aotNan1.NW_018494784v1 124934 205 - 211231 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e canFam3.chr34 11939506 134 + 42124431 I e otoGar3.GL873745 2112311 0 - 2165740 C e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e cerAty1.NW_012004452v1 14835 0 - 218577 C e macFas5.chr6 1291539 0 + 181584905 C e rheMac8.chr6 179830130 0 - 180051392 C e panPan2.chrUn_NW_014024201v1 168370 0 - 190779 C e panTro5.chr3 2581136 0 - 202621043 C a score=2910.000000 s hg38.chr3_KI270934v1_alt 110768 3 + 163458 CCT s nomLeu3.chr11 2892365 3 - 123690457 CCT i nomLeu3.chr11 C 0 T 57 s chlSab2.chr4 1385716 3 + 91010382 CCT i chlSab2.chr4 C 0 T 57 s saiBol1.JH378155 16294435 3 + 16417988 CCT i saiBol1.JH378155 C 0 T 57 s cebCap1.NW_016108150v1 81337 3 - 306014 CCT i cebCap1.NW_016108150v1 C 0 I 17 e mm10.chr13 74325038 1716 + 120421639 I e aotNan1.NW_018494784v1 124934 205 - 211231 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e calJac3.chr2 204151971 54 + 204313951 T e canFam3.chr34 11939506 134 + 42124431 I e otoGar3.GL873745 2112311 0 - 2165740 C e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e cerAty1.NW_012004452v1 14835 0 - 218577 C e macFas5.chr6 1291539 0 + 181584905 C e rheMac8.chr6 179830130 0 - 180051392 C e gorGor5.CYUI01015759v1 3553 1 + 880730 I e panPan2.chrUn_NW_014024201v1 168370 0 - 190779 C e panTro5.chr3 2581136 0 - 202621043 C a score=16719.000000 s hg38.chr3_KI270934v1_alt 110771 13 + 163458 CCACAGGGCAGGC s nomLeu3.chr11 2892311 13 - 123690457 CCACAGGGCAGGT i nomLeu3.chr11 T 57 C 0 s rheMac8.chr6 179830130 13 - 180051392 CCACAGGGCAGGT i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 1385662 13 + 91010382 CCACAGGGCAGGT i chlSab2.chr4 T 57 C 0 s calJac3.chr2 204151917 13 + 204313951 CCCCAGGGCAGGT i calJac3.chr2 T 54 C 0 s saiBol1.JH378155 16294381 13 + 16417988 CCCCAGGGCAGGT i saiBol1.JH378155 T 57 C 0 e mm10.chr13 74325038 1716 + 120421639 I e aotNan1.NW_018494784v1 124934 205 - 211231 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e cebCap1.NW_016108150v1 81340 17 - 306014 I e canFam3.chr34 11939506 134 + 42124431 I e otoGar3.GL873745 2112311 0 - 2165740 C e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e cerAty1.NW_012004452v1 14835 0 - 218577 C e macFas5.chr6 1291539 0 + 181584905 C e gorGor5.CYUI01015759v1 3553 1 + 880730 I e panPan2.chrUn_NW_014024201v1 168370 0 - 190779 C e panTro5.chr3 2581136 0 - 202621043 C a score=98927.000000 s hg38.chr3_KI270934v1_alt 110784 44 + 163458 TTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTTCCT s panTro5.chr3 2581136 32 - 202621043 ------------CTTACTCGTTATTTAATAAACTGGCATTTCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168370 32 - 190779 ------------CTTACTCGTTATTTAATAAACTGGCATTTCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2892324 44 - 123690457 CTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTTCCT i nomLeu3.chr11 C 0 T 57 s rheMac8.chr6 179830143 44 - 180051392 CTGAAACGGTGGCTTACTCGTTACTTAATAAACTGGCATTTCCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291539 44 + 181584905 CTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTTCCT i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1385675 44 + 91010382 CTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTTCCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151930 44 + 204313951 CTGAAAGGATGACTGACTCATTCTTTAAGAAACTAGCATTTCCT i calJac3.chr2 C 0 T 57 s saiBol1.JH378155 16294394 44 + 16417988 CTGAAATGCTGACTGACTCATTCTTTAATAATCTAGCATTTCCT i saiBol1.JH378155 C 0 T 57 s otoGar3.GL873745 2112311 3 - 2165740 -----------------------------------------CCT i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74325038 1716 + 120421639 I e aotNan1.NW_018494784v1 124934 205 - 211231 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e cebCap1.NW_016108150v1 81340 17 - 306014 I e canFam3.chr34 11939506 134 + 42124431 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e cerAty1.NW_012004452v1 14835 0 - 218577 C e gorGor5.CYUI01015759v1 3553 1 + 880730 I a score=139037.000000 s hg38.chr3_KI270934v1_alt 110828 54 + 163458 CCACAGGGCAGGCTTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTT s panTro5.chr3 2581168 54 - 202621043 CCACAGGGCAGGCTTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168402 54 - 190779 CCACAGGGCAGGCTTGAAACGGTGGCTTACTCATTATTTAATAAACTGGCATTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2892311 54 - 123690457 CCACAGGGCAGGTCTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTT i nomLeu3.chr11 T 57 C 0 s rheMac8.chr6 179830187 54 - 180051392 CCGCAGGGCAGGTCTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291583 54 + 181584905 CCTTAGGGCAGGTCTGAAACGGTGGCTTACTCGTTGTTTAATAAACTGGCATTT i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1385719 54 + 91010382 CCTTAGGGCAGGTCTGAAATGGTGGCTTACTTGTTATTTAATAAACTGGCATTT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151917 54 + 204313951 CCCCAGGGCAGGTCTGAAAGGATGACTGACTCATTCTTTAAGAAACTAGCATTT i calJac3.chr2 T 57 C 0 s saiBol1.JH378155 16294381 54 + 16417988 CCCCAGGGCAGGTCTGAAATGCTGACTGACTCATTCTTTAATAATCTAGCATTT i saiBol1.JH378155 T 57 C 0 s otoGar3.GL873745 2112314 16 - 2165740 TCCCA-------------------------TCATCATTTCA------------- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74325038 1716 + 120421639 I e aotNan1.NW_018494784v1 124934 205 - 211231 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e cebCap1.NW_016108150v1 81340 17 - 306014 I e canFam3.chr34 11939506 134 + 42124431 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e cerAty1.NW_012004452v1 14835 0 - 218577 C e gorGor5.CYUI01015759v1 3553 1 + 880730 I a score=10990.000000 s hg38.chr3_KI270934v1_alt 110882 3 + 163458 CCT s panTro5.chr3 2581222 3 - 202621043 CCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168456 3 - 190779 CCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2892365 3 - 123690457 CCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179830241 3 - 180051392 CTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291637 3 + 181584905 CTT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 14835 3 - 218577 CCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385773 3 + 91010382 CCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151971 3 + 204313951 CCT i calJac3.chr2 C 0 T 57 s saiBol1.JH378155 16294435 3 + 16417988 CCT i saiBol1.JH378155 C 0 T 57 e mm10.chr13 74325038 1716 + 120421639 I e aotNan1.NW_018494784v1 124934 205 - 211231 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e cebCap1.NW_016108150v1 81340 17 - 306014 I e canFam3.chr34 11939506 134 + 42124431 I e otoGar3.GL873745 2112330 0 - 2165740 C e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e gorGor5.CYUI01015759v1 3553 1 + 880730 I a score=48173.000000 s hg38.chr3_KI270934v1_alt 110885 13 + 163458 CCACAGGGCAGGC s panTro5.chr3 2581225 13 - 202621043 CCACAGGCCAGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168459 13 - 190779 CCACAGGGCAGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2892368 13 - 123690457 CCACAGGGCAGGT i nomLeu3.chr11 C 0 T 57 s rheMac8.chr6 179830244 13 - 180051392 CCGCAGGGCAGGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291640 13 + 181584905 CCACAGGGCAGGT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 14838 13 - 218577 CCACAGGGCAGGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385776 13 + 91010382 CCACAGGGCAGGT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151917 13 + 204313951 CCCCAGGGCAGGT i calJac3.chr2 T 57 C 0 s saiBol1.JH378155 16294381 13 + 16417988 CCCCAGGGCAGGT i saiBol1.JH378155 T 57 C 0 e mm10.chr13 74325038 1716 + 120421639 I e aotNan1.NW_018494784v1 124934 205 - 211231 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e cebCap1.NW_016108150v1 81340 17 - 306014 I e canFam3.chr34 11939506 134 + 42124431 I e otoGar3.GL873745 2112330 0 - 2165740 C e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e gorGor5.CYUI01015759v1 3553 1 + 880730 I a score=158705.000000 s hg38.chr3_KI270934v1_alt 110898 44 + 163458 TTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTTCCT s panTro5.chr3 2581238 44 - 202621043 TTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTTCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168472 44 - 190779 TTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTTCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2892324 44 - 123690457 CTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTTCCT i nomLeu3.chr11 T 57 C 0 s rheMac8.chr6 179830257 44 - 180051392 CTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTTCCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291653 44 + 181584905 CTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTTCCT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 14851 44 - 218577 CTGAAACGGTGGCTTACTCGTTACTTAATAAACTGGCATTTCCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385789 44 + 91010382 CTGAAACGGTGGCTTACTCGTTACTTAATAAACTGGCATTTCCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151930 44 + 204313951 CTGAAAGGATGACTGACTCATTCTTTAAGAAACTAGCATTTCCT i calJac3.chr2 C 0 T 3 s saiBol1.JH378155 16294394 44 + 16417988 CTGAAATGCTGACTGACTCATTCTTTAATAATCTAGCATTTCCT i saiBol1.JH378155 C 0 T 3 s otoGar3.GL873745 2112330 22 - 2165740 ----------------------GTCCAGTAAAGCAGTCTTTCCC i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74325038 1716 + 120421639 I e aotNan1.NW_018494784v1 124934 205 - 211231 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e cebCap1.NW_016108150v1 81340 17 - 306014 I e canFam3.chr34 11939506 134 + 42124431 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e gorGor5.CYUI01015759v1 3553 1 + 880730 I a score=5588.000000 s hg38.chr3_KI270934v1_alt 110942 4 + 163458 CCAT s panTro5.chr3 2581282 4 - 202621043 CCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168516 4 - 190779 CCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2892368 4 - 123690457 CCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179830301 4 - 180051392 CCTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291697 4 + 181584905 CCTT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 14895 4 - 218577 CCAC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385833 4 + 91010382 CCTT i chlSab2.chr4 C 0 C 0 e mm10.chr13 74325038 1716 + 120421639 I e aotNan1.NW_018494784v1 124934 205 - 211231 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e saiBol1.JH378155 16294438 3 + 16417988 T e calJac3.chr2 204151974 3 + 204313951 T e cebCap1.NW_016108150v1 81340 17 - 306014 I e canFam3.chr34 11939506 134 + 42124431 I e otoGar3.GL873745 2112352 0 - 2165740 C e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e gorGor5.CYUI01015759v1 3553 1 + 880730 I a score=4095.000000 s hg38.chr3_KI270934v1_alt 110946 1 + 163458 A s panTro5.chr3 2581286 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168520 1 - 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2892372 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179830305 1 - 180051392 A i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291701 1 + 181584905 A i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 14899 1 - 218577 A i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385837 1 + 91010382 A i chlSab2.chr4 C 0 C 0 s otoGar3.GL873745 2112352 1 - 2165740 A i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11939640 1 + 42124431 A i canFam3.chr34 I 134 C 0 e mm10.chr13 74325038 1716 + 120421639 I e aotNan1.NW_018494784v1 124934 205 - 211231 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e saiBol1.JH378155 16294438 3 + 16417988 T e calJac3.chr2 204151974 3 + 204313951 T e cebCap1.NW_016108150v1 81340 17 - 306014 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e gorGor5.CYUI01015759v1 3553 1 + 880730 I a score=150504.000000 s hg38.chr3_KI270934v1_alt 110947 49 + 163458 GGGCAGGCTTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTT s panTro5.chr3 2581287 49 - 202621043 GGGCAGGCTTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168521 49 - 190779 GGGCAGGCTTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 2892373 49 - 123690457 GGGCAGGTTTGAAATGGTGGCTTACTCATTATTTAATAAACTGGCATTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179830306 49 - 180051392 GGGCAGGTTTGAAACGGTGGCTTACTCGTTACTTAATAAACTGGCATTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291702 49 + 181584905 GGGCAGGTCTGAAACGGTAGCTTACTCGTTATTTAATAAACTGGCATTT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 14900 49 - 218577 GGGCAGGTCTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385838 49 + 91010382 GGGCAGGTTTGAAACGGTGGCTTACCCGTTATTAAATAAACTGGCATTT i chlSab2.chr4 C 0 C 0 s aotNan1.NW_018494784v1 125139 49 - 211231 GGGCAGGTCTGAAACGATGACTGACTCATTCTTTAATAAACTAGCATTT i aotNan1.NW_018494784v1 I 205 C 0 s canFam3.chr34 11939641 38 + 42124431 AGTCAGGTCTCAAATAATGATTTATCTCTCATTTTACT----------- i canFam3.chr34 C 0 C 0 e mm10.chr13 74325038 1716 + 120421639 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e saiBol1.JH378155 16294438 3 + 16417988 T e calJac3.chr2 204151974 3 + 204313951 T e cebCap1.NW_016108150v1 81340 17 - 306014 I e otoGar3.GL873745 2112353 0 - 2165740 C e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e gorGor5.CYUI01015759v1 3553 1 + 880730 I a score=15282.000000 s hg38.chr3_KI270934v1_alt 110996 4 + 163458 ATTT s panTro5.chr3 2581336 4 - 202621043 ATTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168570 4 - 190779 ATTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3554 4 + 880730 ATTT i gorGor5.CYUI01015759v1 I 1 C 0 s nomLeu3.chr11 2892422 4 - 123690457 ACTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179830355 4 - 180051392 ATTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291751 4 + 181584905 ATTT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 14949 4 - 218577 ATTT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385887 4 + 91010382 ATTT i chlSab2.chr4 C 0 C 0 s canFam3.chr34 11939679 4 + 42124431 ATTT i canFam3.chr34 C 0 C 0 e mm10.chr13 74325038 1716 + 120421639 I e aotNan1.NW_018494784v1 125188 0 - 211231 C e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e saiBol1.JH378155 16294438 3 + 16417988 T e calJac3.chr2 204151974 3 + 204313951 T e cebCap1.NW_016108150v1 81340 17 - 306014 I e otoGar3.GL873745 2112353 0 - 2165740 C e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=85667.000000 s hg38.chr3_KI270934v1_alt 111000 15 + 163458 CCTGGTCATGCCACG s panTro5.chr3 2581340 15 - 202621043 CCTGGTCATGCCATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168574 15 - 190779 CCTGGTCATGCCATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3558 15 + 880730 CCTGGTCATGCCACG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2892426 15 - 123690457 CCTGGTCATGACACT i nomLeu3.chr11 C 0 I 302 s rheMac8.chr6 179830359 15 - 180051392 CCTGGTCATGCCACT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291755 15 + 181584905 CCTGGTCATGCCACT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 14953 15 - 218577 CCTGGTCATGCCACT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385891 15 + 91010382 CCTGGTCATGCCACT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151971 15 + 204313951 CCTGGCCATGCTACT i calJac3.chr2 T 3 C 0 s saiBol1.JH378155 16294435 15 + 16417988 CCTGGCCATGCTACT i saiBol1.JH378155 T 3 C 0 s aotNan1.NW_018494784v1 125188 15 - 211231 CCTGGCCATGCTACT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2112353 6 - 2165740 ---------GCCACT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11939683 15 + 42124431 TCTGGCTATAGTACT i canFam3.chr34 C 0 C 0 e mm10.chr13 74325038 1716 + 120421639 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e cebCap1.NW_016108150v1 81340 17 - 306014 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=33437.000000 s hg38.chr3_KI270934v1_alt 111015 5 + 163458 CTGGC s panTro5.chr3 2581355 5 - 202621043 CTGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168589 5 - 190779 CTGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3573 5 + 880730 CTGGC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2892743 5 - 123690457 CTGGC i nomLeu3.chr11 I 302 C 0 s rheMac8.chr6 179830374 5 - 180051392 CTGGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291770 5 + 181584905 CTGGC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 14968 5 - 218577 CTGGC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385906 5 + 91010382 CTGGC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151986 5 + 204313951 CCGGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16294450 5 + 16417988 CCAGC i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 125203 5 - 211231 CCAGC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2112359 5 - 2165740 CTGGC i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11939698 5 + 42124431 CAGAC i canFam3.chr34 C 0 C 0 e mm10.chr13 74325038 1716 + 120421639 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e cebCap1.NW_016108150v1 81340 17 - 306014 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=290564.000000 s hg38.chr3_KI270934v1_alt 111020 46 + 163458 TGCACTTCTAACCTTGGC-CTTCTAACAGCAAAGCACAT-TGGCTTGG s panTro5.chr3 2581360 46 - 202621043 TGCACTTCTAACCTTGGC-CTTCTAACAGCAAAGCACAT-TGGCTTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168594 46 - 190779 TGCACTTCTAACCTTGGC-CTTCTAACAGCAAAGCACAT-TGGCTTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3578 46 + 880730 TGCACTTCTAACCTTGGC-CTTCTAACAGCAAAGCACAT-TGGCTTGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2892748 46 - 123690457 TGCACTTCTAACCTTGGC-CTTCTAACAGCAAATCACAT-TGGCTTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179830379 46 - 180051392 TGCACTTCTAAACTTGGC-CTTCTAACAGCAAAGCACAT-TGGCTTGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291775 46 + 181584905 TGCACTTCTAAACTTGGC-CTTCTAACAGCAAAGCACAT-TGGCTTGG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 14973 46 - 218577 TGCACTTCTAAACTTGGC-CTTCTAAGAGCAAAGCGCAC-TGGCTTGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385911 46 + 91010382 TGCACTTCTAACCTTGGC-CTTCTAACAGCAAAGCACAT-TGGCTTGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151991 46 + 204313951 TGCACTGCTAACCTTGGC-CCTCTAACTGCAGAGCACTT-TGGCTTGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16294455 46 + 16417988 TGCACTGCTAACCTTGGT-CCTCTAACTGCAAAGCACTT-TGGCTTGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 81357 46 - 306014 TGCACTGCTAACCTTGTC-CCTCTAACTGCAAAGCACTT-TGGTTTGG i cebCap1.NW_016108150v1 I 17 C 0 s aotNan1.NW_018494784v1 125208 46 - 211231 TGCCCTGCCAACCTTGGC-CCTCTAACTGCAAAGCACTT-TGGCTTGG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2112364 46 - 2165740 TGCCCTCCTGACCCCAGCACTGGCGAAAGTAAGGCATGTGTTGCT--G i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11939703 45 + 42124431 TGCATACTAATCTTTGAT-CTGGTAA--GTCAGGTGTGTTTTGCTTAG i canFam3.chr34 C 0 C 0 e mm10.chr13 74325038 1716 + 120421639 I e dasNov3.JH577625 353068 96 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=211340.000000 s hg38.chr3_KI270934v1_alt 111066 26 + 163458 AGATGCCACTGCTGGCATCAGTGGAT s panTro5.chr3 2581406 26 - 202621043 AGATGCCACTGCTGGCATCAGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168640 26 - 190779 AGATGCCACTGCTGGCATCAGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3624 26 + 880730 AGATGCCACTGCTGGCATCAGTGGAT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2892794 26 - 123690457 AGATGCCACTGCTGGCATCAGTGGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179830425 26 - 180051392 AGATGCCACTGCTGCCATCAGTGGAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291821 26 + 181584905 AGATGCCACTGCTGCCATCAGTGGAC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 15019 26 - 218577 AGATGCCACTGCCGCCATCAGTGGAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385957 26 + 91010382 AGATGCCACTGCTGCTATCAGTGGAC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204152037 26 + 204313951 AGATGCCACTGCTGGCATCAGTGGCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16294501 26 + 16417988 AGATGCCCCTGCTGGCATCAGTGGAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 81403 26 - 306014 AGATGCCACTGCTGGCATCAGTGGAC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 125254 26 - 211231 AGATGCCGCTGCTGGCATCAGTGGAC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2112410 26 - 2165740 AGATGCTGCTGTTGGCAGCACTGGGT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11939748 26 + 42124431 AGATGCTCCTACTGGCAGCAGCAAAT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 353164 24 - 913073 AGATGATGTTAC--ACAGCAGGAGAT i dasNov3.JH577625 I 96 C 0 e mm10.chr13 74325038 1716 + 120421639 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=2663098.000000 s hg38.chr3_KI270934v1_alt 111092 312 + 163458 GCCGACCCAAAGCAAGGAACAGGTCACAGTGATCCAGAAAATGGCGAGAACCCAGGGATCAAAGTTACCAGAGGG--------------AAAAAGGCA------------TTTTTTGGATATACTTTTGGG-GAAACGACATAAAATGCAGAGAAA-ATGCAGGGGT-GGGGCTGAGTCCCACCAGGCGGGAGGAAAAGGCAGGTGCAGGTGG-GCGTGGCGAGAAGGCGCACCTTGTAGTCTTCCCCGGCGTGCGCGCCCCGTGACTCCTTCCCCGCCTCTGCTCCATTGACGGTCTGCAGCGCACATAGCATCAGG-TTCTGCAGCTCCAGGGTCTCCACC s panTro5.chr3 2581432 312 - 202621043 GCCGACCCAAAGCAAGGAACAGGTCACAGTGATCCAGAAAATGGCGAGAACCCAGGGATCAAAGTTACCAGGGGG--------------AAAAAGGCA------------TTTTTTGGATTTACTTTTGGG-GAAACGACATAAAATGCAGAGAAA-ATGCAGGGGT-GGGGCTGAGTCCCACCAGGCGGGAGGAAAAGGCAGGTGCAGGTGG-GCGTGGCGAGAAGGCGCACCTTGTAGTCTTCCCTGGCGTGCGCGCCCCGTGACTCCTTCCACGCCTCTGCTCCACTGACGGTCTGCAGCGCACACAGCATCAGG-TTCTGCAGCTCCAGGGTCTCCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168666 312 - 190779 GCCGACCCAAAGCAAGGAACAGGTCACAGTGATCCAGAAAATGGCGAGAACCCAGGGATCAAAGTTACCAGGGGG--------------AAAAAGGCA------------TTTTTTGGATTTACTTTTGGG-GAAACGACATAAAATGCAGAGAAA-ATGCAGGGGT-GGGGCTGAGTCCCACCAGGCGGGAGGAAAAGGCAGGTGCAGGTGG-GCGTGGCGAGAAGGTGCACCTTGTAGTCTTCCCTGGCGTGCACGCCCCGTGACTCCTTCCACGCCTCTGCTCCACTGACGGTCTGCAGCGCACACAGCATCAGG-TTCTGCAGCTCCAGGGTCTCCACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3650 314 + 880730 GCCGACCCAAAGCAAGGAACAGGTCACAGTGATCCAGAAAATGGTGAGAACCCAGGGATCAAAGTTATCAGGGGG-------------AAAAAAGGCA------------TTTTTTGGATTTACTTTTGGGAGAAACGACATAAAAC-CAGAGAAA-ACGCAGGAGT-GGGGCTGAGTCCCACCAGGCGGGAGGAAAAGGCAGGTGCAGGTGG-GCGTGGCGAGAAGGCGCACCTTGTAGTCTTCCCTGGCGTGCGCACCCCGTGACTCCTTCCACGCCTCTGCTCCATTGACGGTCTGCAGCGCACACAGCATCAGGTTTCTGCAGCTCCAGGGTCTCCACC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2892820 311 - 123690457 GCTGACCCAAAGCAAGGAA-AGGTTGCAGTGATCCAGAAGATGGCGAGAACCCAGGGATCAAAGTTACCAGGGGG--------------AAGAAAGCA------------TTTTTTGGATTTACTTTTGGG-GAAACGAAATAAAATGCAGAGAAA-ATGCAGGGGT-GGGGCTGAGTCCACCCAGGTGGGAGGAAAAGGCAGGTGCAGGTGG-GTGTGGTGAGAAGGCGCACCTTGTAGTCTTCCCTGGCGTGTGCGCCCCGTGACTCCTTCCACGCCTCTGCTCCACTGATGGTCTGCGGCGCACACAGCATCAGG-TTCTGCAGCTCCAGGGTCTCCACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179830451 312 - 180051392 GCTGACCCAAAGCAAGGAAAAGGTCACAGTGATCCAGAGGATGGCGGGAACCCAGGGATCAAAGTTACCAGGGGG--------------AAAAAGGCG------------TTTTTTGGATTTACTTTTGGG-GAAATGAAATAAAATGCAGAGAAA-ATGCAGGGGT-GGGGCTGAGTCCCACCAGGTGGGAGGAAAAGGCAGGTGCAGGTGG-GTGTGGCGAGAAGGCGCACCTTGTAGTCTTCCCTGGCGTGTGCGCCCCGTGACTCCTTCCGCGCCTCTGCTCCGTAGATGGTCTGCAGCGCACACAGCATCAGG-TTCTGCAGCTCCAGGGTCTCCACC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1291847 312 + 181584905 GGTGACCTAAAGCAAGGAAAAGGTCACAGTGATCCAGAGGATGGCGGGAACCCAGGGATCAAAGTTACCAGGGGG--------------AAAAAGGCG------------TTTTTTGGATTTACTTTTGGG-GAAATGAAATAAAATGCAGAGAAA-ATGCAGGGGT-GGGGCTGAGTCCCACCAGGTGGGAGGAAAAGGCAGGTGCAGGTGG-GTGTGGCGAGAAGGCGCACCTTGTAGTCTTCCCTGGCGTGTGCGCCCCGTGACTCCTTCCGCGCCTCTGCTCCGTAGATGGTCTGCAGCGCACACAGCATCAGG-TTCTGCAGCTCCAGGGTCTCCACC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 15045 312 - 218577 ACTGACCCAAAGCCAGGAAACGGTCACAGTGATCCAGAGGATGGCGGGAACCCAGGGATCAAAGTTACCAGGGGG--------------AAAAAGGCG------------TTTTTTGGATTTACTTTTGGG-GAAATGAAATAAAATGCAGAGAAA-ATGCAGGGGT-GGGGCTGAGTCCCACCAGGTGGGAGGAAAAGGCAGGCGCAGGTGG-GTGTGGCGAGAAGGCGCACCTTGTAGTCTTCCCTGGCGTGTGCGCCCCGTGACTCCTTCCGCGCCTCTGCTCCGTAGATGGTCTGCAGCGCACACAGCATCAGG-TTCTGCAGCTCCAGGGTCTCCACC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1385983 312 + 91010382 ACTGACCCAAAGCAAGAAAAAGGTCACAGTGATCCAGAGGATGGTGGGAACCCAGGGATCAAAGTTACCAGGGGG--------------AAAAAGGCA------------TTTTTTGGATTTACTGTTGGG-GAAATGAAATAAAATGCAGAGAAA-ATGCAGGGGT-GGGGCTGAGTCCCACCAGGTGGGAGGAAAAGGCAGGTGCAGGTGG-GTGTGGCGAGAAGGCGCACCTTGTAGTCTTCCCTGGCGTGGGCGCCCCGTGACTCCTTCCGCGCCTCTGCTCCGTAGATGGTCTGCAGCGCACACAGCATCAGG-TTCTGCAGCTCCAGGGTCTCCACC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204152063 292 + 204313951 ACTGACCCAAGGCAAAGCAAAGGT--CAGTGTTGCAGAAGACGGCGAGA-----------------ACCAGGGGG---------------AAAAGGCA------------CTTTCTGGATTTACTTTTGGG-GAAATGGAATGAAATGCAGAGAAA-ATGCAGGGGT-GGGGTTGAGTCACACAAGATGGGAGAAAGCGGCAGGTGCAGGTGG-GTGTGGCCAGAAGGCGCACCTTGTAGTCTTCTCTGGCGTGCGCGCCCCGCGACTCCTTCCGCGCCTCTGCTCCGTAGATGGTCTGCAGCGCACACAGCATCAGG-TTCTGCAGCTCCAGGGTCTCCACC i calJac3.chr2 C 0 M 577 s saiBol1.JH378155 16294527 309 + 16417988 GCTGACCCAAGGCAAAGCAAAGGT--CAGTGTTGCAGAAGATGGCAAGAACCCAGGGATCAATGTTACCAGGGGG---------------AAAAGACA------------CTTTTTGGATTTACTTTTGGG-GAAATGGAATGAAATGTGGAGAAA-ATGCAGGGGT-GGGGTTGAGTCCCACCAGGTGGGAGAAAGCGGCAGGTGCAGGTGG-GCGTGGCCAGAAGGCGCACCTTGTAGTCTTCTCTGGCGTGCGCACCCCGCGACTCCTTCCGTGCCTCCGCTCCGTAGATGGTCTGCAGCGCACACAGCATCAGG-TTCTGCAGCTCCAGGGTCTCCACC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 81429 309 - 306014 GCTGACCCAAGGCAAAGCAAAGGT--CAGTGTTGCAGAAGATGGCGAGAACCCAGGGATCAATGTTACCAGGGGG---------------AAAAGGCA------------CTTTTTGGATTTACTTTTGGG-GAAATGGAATGAAATGCAGAGAAA-ATGCAGATGT-GGGGTTGAGTCCCACCAGGTGGGAGAAAGTGGCAGGTGCAGGTGG-GTGTGGCCAGAAGGCGCACCTTGTAGTCTTCTCTGGCGTGCGCGCCCCGCGACTCCTTCCGTGCCTCTGCTCCGTAGATGGTCTGCAGCGCACACAGCATCAGG-TTCTGCAGCTCCAGGGTCTCCACC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 125280 309 - 211231 GCTGACCCAAGGCAAAGCAAAGGT--CAGTGCTGCAGAAGACAGCGAGGACCCAGGGATCAATGTCACCAGGGGG---------------AAAAGGCA------------CTTTTTGGATTTACTTTTGGG-GAAATGGAATGAAATGCAGAGAAA-ATGCAGGGGT-GGGGTCGAGTCCCACCAGCGGGGAGAAAGCGGCAGGTGCGGGTGG-GCGTGGCCAGAAGGCGCACCTTGTAGTCTTCCCTGGCGTGCGCGCCCCGCGACTCCTTCCGCGCCTCTGCTCCGTAGATGGTCTGCAGTGCACACAGCATCAGG-TTCTGCAGCTCCAGGGTCTCCACC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2112436 320 - 2165740 GCTGATTCAAGCAAAGAAAAAGGCCTCACTCATACTGAAGACAGT--GAACAAAGGAATGAGAATTATCAGGGAA--------------AAAAATGCAAAAAAAAAGCATTTTTCTCAACTTCCTTTTGGG-AAAATCAAACGAAAGGCAGAGAAA-ATGCAGGGGT-GGGG-TGAGTAACACCAGATGGGAG-AAACAGCAGGTTCACGTGG-GGCTCCGTGAGTGGCAAACCTTATAATCTTCCCTGGCATGAGCACCTCGTGACTCTTTCCGTGCCTCTGCTCCATAGATGGTTTGCAGTGCGCACAGCATCAGG-TTCTGTAGCTCCAGGGTCTCCACC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74326754 281 + 120421639 GCTAACTCAAAACAAGAAAAAGGT--CTGAGAGTAAGAATAT-------------GAATAAAAGATATTGAAGGA---------------AAAAGTGT------------TCTCCTTGATTTTGTTTTGGG-AAAAT-AAATGAAGCACAGAAAGC-AAGCAGGGAT-GAGAC---------CTGGGTGCG---CAACGTCAGGTCAAGGTGGCGCAT---CTGGAGACATACTTTGTAATCTTCCCTGGCATGGGCTCCCCGGGACTCCTTCCGAGCTTCTGCACCATATATGGTCTGCAGTGCGCACAGCATCAGA-TTCTGCAGCTCCAGGGTCTCCACC i mm10.chr13 I 1716 C 0 s canFam3.chr34 11939774 328 + 42124431 GCCGATCTGAGGCAAGAAAAAGGTCATGCTGATACTAAACACAGTGATA-CCAAAGCATGAAAGTTATCAGGCaaaaaaaaaaaaaaaaaaaaaGGCA----------TTTTTTTTCAATTTACTCGTGGG-AAAATGAAGTGAAATGTAGAGAAA-ATGCAGGGATAGGGGCTGAGCAATGCCAGTGGACAGAAGGCATGATGTGCACAGGG-GTACGTGGTCAGGGCACACCTTGTAATCTTCCCTGGCGTGAGCGCCACGTGACTCCTTCCGGGCCTCTGCTCCATAAATGGTCTGAAGTGCACAGAGCATCAGG-TTCTGCAGCTCCAGGGTCTCTACC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 353188 274 - 913073 GCTGGCCCAAAGCAAGACAAAGGTAACACTGACGCTGAAGATGGTGAGAGCAAAGG------------CAGGGAG--------------------GCT----------GTTTTTCTTGGTTTACTTT-----GAGAAAAGGTAGAAGATAGAGAAGCATGGAGGCAG-GGACCCAGGGCACAC-----------ACAGGGCATGCAC---TAG-CCACGG-----AGCCGCACCTTGAAATCTTCCCTGGCGTGAGCGCCACGCGACTCCTTCCGGGCCTCCGCCCCGTAGATGGTCTGCATTGCGCACAGCATCAGG-TTCTGCAGCTCCAGGGTCTCCACC i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 55401 1620 + 100774 M e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=563535.000000 s hg38.chr3_KI270934v1_alt 111404 96 + 163458 AGGTCCGTGTTCCAGACCATTCCTGGGGAC-ACAAAAAGTTCCATCAGGGGCAGGTGGGACCCA-------GTCACA-CG-GGCCCTCCGAGCTGTCAGCCTGGGC s panTro5.chr3 2581744 96 - 202621043 AGGTCCGTGTTCCAGACCATTCCTGGGGAC-ACAAAAACTTCCATCAGGGGCAGGCGGGACCCA-------GTCACA-CG-GGCCCTCCGAGCTGTCAGCCTGGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 168978 96 - 190779 AGGTCCGTGTTCCAGACCATTCCTGGGGAC-ACAAAAACTTCCATCAGGGGCAGGCGGGACCCA-------GTCACA-TG-GGCCCTCCAAGCTGTCAGCCTGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 3964 96 + 880730 AGGTCCGTGTTCCAGACCATTCCTGGGGAC-AC-AAAACTTCCATCAGGGGCAGGCGGGACCCA-------GTCACACCG-GGCCCTCCGAGCTGTCAGCCTGGGC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2893131 95 - 123690457 AGGTCCGTGTTCCAGACCATTCCTGGGGAC-ACAAAAAGTTCCATC-GGGGCAGGCAGGACCCA-------GCCACA-TG-GGCCCTCCGAGATGTCAGCCTGGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179830763 95 - 180051392 AGGTCCGTGTTCCAGACCATTCCTGGGGAC-ACAAAAAGTTCCATCAGGGGCAGGCGGGACCC--------GTCACA-GG-GGCCTTCTGAGCTGTCAGCCTGGGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1292159 95 + 181584905 AGGTCCGTGTTCCAGACCATTCCTGGGGAC-ACAAAAAGTTCCATCAGGGGCAGGCGGGACCC--------GTCACA-GG-GGCCTTCTGAGCTGTCAGCCTGGGC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 15357 95 - 218577 AGGTCCGTGTTCCAGACCATTCCTGGGGAC-ACAAAAAGTTCCATCAGGGGCAGGCGGGACCC--------GTCACA-GG-GGCCTACTGAGCTGTCAGCCTGGGC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1386295 96 + 91010382 AGGTCCGTGTTCCAGACCATTCCTGGGGAC-ACAAAAAGTTCCACCAGGGGCAGGCGGGGCCCA-------GTCACA-GG-GGCCTTCTGAGCTGTCCGCCTGGGC i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 16294836 85 + 16417988 AGGTCCGTGTTCCAGACCATTCCTGGGGAC-ACATGAGGATCCATCAGGGGCA------------------GTCGCA-TG-GGCCCTCCGAGCTGTCTGCCCGTAT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 81738 85 - 306014 AGGTCCGTGTTCCAGACCATTCCTGGGGAC-ACATGAGGATCCATCAGGGGCA------------------GTCACA-TG-GGCCCTCCGAGCTGTCAGCCCGTAT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 125589 85 - 211231 AGGTCCGTGTTCCAGACCATTCCTGGGGAC-ACATGAGGATCCATCAGGGGCA------------------GTCACG-TG-GGCCCTCCGAGCTGTCAGCCCGTAC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2112756 102 - 2165740 AGATCTGTGTTCCAGACCATTCCTGGTGGCAACACAAGGGCCCAT---GGGAGGGTGGGATCCACAGGGCTAACACA-CACAGCCCTGTGGCCATCCAGCCTGGGC i otoGar3.GL873745 C 0 I 37 s mm10.chr13 74327035 82 + 120421639 AGGTCTGTGTTCCAAACCATTCCTGGGGAT-ACACAAGAACCAATGAGAGACAAATAGGACCCA-------GTCATG-TA-GGTACTCTGGA-------------- i mm10.chr13 C 0 C 0 s canFam3.chr34 11940102 80 + 42124431 AGGTCGGTGTTCCAGACCATTCCTAGGGAC-ACACCGAGTAC--TCATG---AGATAGGATCCA-------GTTAAC-TG-GGTCCTCCAGGCTG----------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 353462 72 - 913073 AGGTCGGTATTCCAGACCATTCCTGGGGACCACAG-------CATAAGACG--------------------GGCATG-AG-GCGCCTGTG----GCCAGCCAGAG- i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 55401 1620 + 100774 M e calJac3.chr2 204152355 577 + 204313951 M e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=61116.000000 s hg38.chr3_KI270934v1_alt 111500 10 + 163458 CTGCTAGTCC s panTro5.chr3 2581840 10 - 202621043 CTGCTAGTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 169074 10 - 190779 CTGCTAGTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 4060 10 + 880730 CTGCTAGTCC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2893226 10 - 123690457 CTGCTAGTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179830858 10 - 180051392 CTGCTAGTCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1292254 10 + 181584905 CTGCTAGTCC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 15452 10 - 218577 CTGCTAGTCC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1386391 10 + 91010382 CTGCTAGTCC i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 16294921 10 + 16417988 CTGCTAGTCC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 81823 10 - 306014 CTGCTAGTCC i cebCap1.NW_016108150v1 C 0 I 10 s aotNan1.NW_018494784v1 125674 10 - 211231 CTGCTAGTCC i aotNan1.NW_018494784v1 C 0 I 10 s mm10.chr13 74327117 1 + 120421639 ---------C i mm10.chr13 C 0 C 0 s dasNov3.JH577625 353534 5 - 913073 -----GGACC i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 55401 1620 + 100774 M e calJac3.chr2 204152355 577 + 204313951 M e canFam3.chr34 11940182 0 + 42124431 C e otoGar3.GL873745 2112858 37 - 2165740 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=27556.000000 s hg38.chr3_KI270934v1_alt 111510 8 + 163458 ATGGAGTC s panTro5.chr3 2581850 8 - 202621043 ATGGAGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 169084 8 - 190779 ATGGAGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 4070 8 + 880730 ATGGAGTC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2893236 8 - 123690457 ATGGAGTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179830868 8 - 180051392 GTGGAGCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1292264 8 + 181584905 GTGGAGCC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 15462 8 - 218577 GTGGAGCC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1386401 8 + 91010382 GTGTAGCC i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 16294931 7 + 16417988 -CAGAGCC i saiBol1.JH378155 C 0 I 3 s mm10.chr13 74327118 8 + 120421639 ATAAAGCA i mm10.chr13 C 0 C 0 s dasNov3.JH577625 353539 8 - 913073 GGGGAGAC i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 125684 10 - 211231 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e calJac3.chr2 204152355 577 + 204313951 M e cebCap1.NW_016108150v1 81833 10 - 306014 I e canFam3.chr34 11940182 0 + 42124431 C e otoGar3.GL873745 2112858 37 - 2165740 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=291349.000000 s hg38.chr3_KI270934v1_alt 111518 66 + 163458 ACTGGTTGTGGCTTTACAGCTGGGGGCCAGCACCCATCCAGAC---------AGCAAGCATG--GAACTAAGTCAG-C s panTro5.chr3 2581858 66 - 202621043 ACTGGTTGTGGCTTTACAGCTGAGGGCCAGCACCCATCCAGAC---------AGTAAGCATG--GAACTAAGTCAG-C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 169092 66 - 190779 ACTGGTTGTGGCTTTACAGCTGAGGGCCAGCACCCATCCAGAC---------AGTAAGCATG--GAACTAAGTCAG-C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 4078 66 + 880730 ACTGGTTGTGGCTTTACAGCTGAGGGCCAGGACCCATCCAGAC---------AGCAAGCATG--GAACTAAGTCAG-C i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2893244 66 - 123690457 ACTGGTTGTGGCTTTATAGCTGAGGGCCAGGACCCATCCAGAC---------AGCAAGCATG--GAACTAAGTCAG-C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179830876 56 - 180051392 ACTGGTTGTGGCTTTATGGCTGTGG----------ATCCGGAC---------AGCAAGCATG--GAACTAAGTCAG-C i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1292272 56 + 181584905 ACTGGTTGTGGCTTTATGGCTGTGG----------ATCCGGAC---------AGCAAGCATG--GAACTAAGGCAG-C i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 15470 66 - 218577 ACTGGTTATGGCTTTATGGCTGTGGGCCAGGACCCATCCGGAC---------AGCAAGCATG--GAACTAAGTCAG-C i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1386409 66 + 91010382 ACTGGTTATGGCTTTATGGCTGTGGGCCAGGACCCATCCGGAC---------AGCAAGCATG--GAACTAAGTCAG-C i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 16294941 67 + 16417988 CCCGGTGGTGGCTTTATAGCTGTGGGCCAGGACCCATCCAGAC---------AGCAAGCGTG--GAGCTAACTCAGCC i saiBol1.JH378155 I 3 C 0 s cebCap1.NW_016108150v1 81843 65 - 306014 CCTGGTGGTGGCTTTATAGCTGTGGGCCAGGACCCATCCAGAC---------AGCAAGTAT---GAGCTAAGGCAG-C i cebCap1.NW_016108150v1 I 10 C 0 s aotNan1.NW_018494784v1 125694 66 - 211231 CCCCGCGGCGGCTGTATAGCTGTGGGCCGGGACCCATCCAGAC---------GGCAAGCACG--GAGCTAAGTCAG-C i aotNan1.NW_018494784v1 I 10 C 0 s mm10.chr13 74327126 53 + 120421639 -----------ACATACAGCTGTGGGGAAGAGAT-GGCTGGAC---------AGCAGGCATG--GA-CTAAGGTAG-T i mm10.chr13 C 0 I 1 s canFam3.chr34 11940182 25 + 42124431 ----------------CAGCTGTGGGC----------------------------------A--GAGTGAATTCCG-C i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 353547 60 - 913073 ---------------ACAGCAGTGAGC-AGGATCCCTTCAGACGCCCACCCAGGGGAGCGTGCCGGACGATG-CGG-C i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 55401 1620 + 100774 M e calJac3.chr2 204152355 577 + 204313951 M e otoGar3.GL873745 2112858 37 - 2165740 I e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=721358.000000 s hg38.chr3_KI270934v1_alt 111584 121 + 163458 ACTGACGGGACA----GACA----------CCAGCCCACCCTGCAGAAGGCAGG--GCC-CAACAGTGTGCACAGAGCCC-----ACT-GTCTGCTCACCCCGGTCAAACGTCTTCAGATGCTTCAGGTCTCCATAGAGCTTGC s panTro5.chr3 2581924 118 - 202621043 ACTGACGGGACA----GACA----------CCAGCCCACCCTGCAGAAGGCAGG--GCC-CAACAGTGTGCACAGAGCCC-----ACT-GTCTGCTCACCCCGGTCAAACGTCTTCAGATGCTTCAGGTCTCCGTAGAGCT--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 169158 118 - 190779 ACTGACGGGACA----GACA----------CCAGCCCACCCTGCAGAAGGCAGG--GCC-CAACAGTGTGCACAGAGCCC-----ACT-GTCTGCTCACCCCGGTCAAACGTCTTCAGATGCTTCAGGTCTCCGTAGAGCT--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 4144 121 + 880730 ACTGACGGGACA----GACA----------CCAGCCCACCCTGCAGAAGGCAGG--GCC-CAACAGTGTGCACAGAGCCC-----ACT-GTCTGCTCACCCCGGTCAAACGTCTTCAGATGCTTCAGGTCTCCGTAGAGCTTGC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2893310 118 - 123690457 ACTGACGGGACA----GACA----------CCAGCCCACCCTGCAGAAGGCAGG--GCC-CAACAGTGTGCACGGAGCCT-----GCT-GTCTGCTCGCCCCGACTGAACGTCTTCAGGTCCTTCAGGTCTCTGCAGAGCT--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179830932 124 - 180051392 ACTGACGGCACA----GACA----------CCAGCCCACCCTACAGAAGGCAGG--GCC-CAACA--CTGCACAGAGCCCGCTGTGCT-GTCTGCTCACCCCGGTCAAATGTCTTCAGGTGCTTCAGGTCTCCGTAGAGCTTGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1292328 124 + 181584905 ACTGACGGCACA----GACA----------CCAGCCCACCCTACAGAAGGCAGG--GCC-CAACA--CTGCACAGAGCCCGCTGTGCT-GTCTGCTCACCCCGGTCAAACGTCTTCAGGTGCTTCAGGTCTCCGTAGAGCTTGC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 15536 124 - 218577 ACTGACGGCACA----GACA----------CCAGCCCACCCTACAGAAGGCAGG--GCC-CAACG--CTGCACAGAGCCCGCTGTGCT-GTCTGCTCACCCCGGTCAAACGTCTTCAGGTGCTTCAGGTCTCCGTAGAGCTTGC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1386475 124 + 91010382 ACTGACAGCACA----GACA----------CCAGCCCACCCTGCAGAAGGCAGG--GCC-CAACA--CTGCACAGAGCCCGCTGTGCT-GTCTGCTCACCCCGGTCAAACGTCTTCAGGTGCTTCAGGTCTCCGTAGAGCTTGC i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 16295008 120 + 16417988 ACTGGCTGGATA----GACA----------CTAGCCCA-CCTGCAAAAGGCGCG--GCC-CAGTCGTGTGTGCGGAGCCT-----GCT-GTCTGCTCACCCCTGTCGAACGTCTTCAGGTGCTTCAGGTCTCCATAGAGTTTGC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 81908 120 - 306014 ACTGGCCGGATA----GACA----------CTAGCCCA-CCTGCAAAAGGCACG--GCC-CAGTCGTGTGCGTGGAGCCT-----GCT-GTCTGCTCACCCCTGTCAAACGTCTTCAGGTGCTTCAGGTCTCCGTAGAGCTTGC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 125760 90 - 211231 ACC---------------------------------------------GGCACG--GCC-CAGTCGTGTGCGCGGAGCCC-----GCC-GTCTGCTCACCCCTGTCAAACGTCTTCAGGTGCTTCAGGTCGCCGTAGAGCTTGC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2112895 108 - 2165740 CCTGACAGAACA----GAC-------------AGCCCAACCCGCAGAAGGCAGC--ACCTCAGCC-----------ACAT-----GCT-GACTGCTCACCCCTGTCAAATGTCTTCAGGTGCTTCAGATCTCCATAGAGCTGGC i otoGar3.GL873745 I 37 C 0 s mm10.chr13 74327180 111 + 120421639 GTAAAAGGGACA----GATA----------CCAACCTATCCCAAGGAAGGCAGT--ATC-----------CTCTGAGAGT-----ACT-GCTGACTCACCCCTGTCGAATGTCTTTAGATGCTTTAGGTCTCCATAGAGCTGAC i mm10.chr13 I 1 C 0 s canFam3.chr34 11940207 129 + 42124431 ACTG---GGACA----GACAGGGCTCTGAGGCAGTCTGTCTTGCAAATATCCAGCAGCC-CAACT--GTGTGCAGGGCCC----CATG-GAATGCTCACCTCGGTCAAATGTCTTCAGATGCTTTAGGTCTCCATAGAGCTGGC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 353607 115 - 913073 -TCCCCAGGACCCCGTGAGG----------TCGGTCCACCCTGC------------ATC-CACTTATCTGGAAGAGACCT-----GCTCAGCTCCTCACCCCTGTCAAAGGTCTTCAGATGCTTCAAGTCCCCATAGAGCTGGC i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 55401 1620 + 100774 M e calJac3.chr2 204152355 577 + 204313951 M e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=1486094.000000 s hg38.chr3_KI270934v1_alt 111705 171 + 163458 TGATTTTCCCACAACCTTCTTGCAACAAGCTTCCCACACGGAACACGGCAGCATGATTTTGCGTTGACTGTGGCACAAAATATT---ATTTGTAAACTTTTAATTCATA-GAAGCAGCCATACCAAGAACTGC-TTAA-CTTTTAGAC----CTGTTG-TTTTGC-----------------------------------ATTTCATTT---------TATTTATG s panTro5.chr3 2582042 171 - 202621043 TGATTTTCCCACAACCTTCTTGCAACAAGCTTCCCACACGGAACACGGCAGCATGATTTTGCGTTGACTGTGGCACAAAATATT---ATTTGTAAACTTTTAATGCATA-GAAGCAGCCATACCAAGAACTGC-TTAA-CTTTTAGAC----CTGTTG-TTTTGC-----------------------------------ATTTCATTT---------TATTTATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 169276 171 - 190779 TGATTTTCCCACAACCTTCTTGCAACAAGCTTCCCACACGGAACACGGCAGCATGATTTTGCGTTGACTGTGGCACAAAATATT---ATTTGTAAACTTTTAATTCATA-GAAGCAGCCATACCAAGAACTGC-TTAA-CTTTTAGAC----CTGTTG-TTTTGC-----------------------------------ATTTCATTT---------TATTTATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 4265 173 + 880730 TCATTTTCCCACAACCTTCTTGCAACAAGCTTCCCACACGGAACACGGCAGCATGATTTTGCGTTGACTGTGGCACAAAATATA---ATTTGTAAACTTTTAATTCATA-GAAGCAGCCATACCAAGAACTGCTTTAA-CTTCTAGAC----CTGTTGTTTTTGC-----------------------------------ATTTCATTT---------TATTTATG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2893428 171 - 123690457 TGATTTTCCCACAACCTTCTTGCAACACGCTTCCCACACGGAACACAGCAGCACGATTTTGCACTGACTGTGGCACAAAATATT---ATTCATAAACTTTTAATCCATA-GAAGCAGCCATACCAAGAACTGC-TTAA-CTTGTAGAC----CTGTTG-TTTTGC-----------------------------------ATTTCATTT---------TATTTATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179831056 174 - 180051392 TGATTTTCCCACAACCTTCTTGCAACACGCTTCCCACACGGAACACGGCAGCATGATTTTGCATTGACTGTGACACAAAATATT---ATTGGTAAACTTTTAATTCATA-GAAGCAGCCACACCAAGAACTGC-TTAA-CTTTTAGAC---ACTGTTG-TTTTGC-----------------------------------ATTTCATTT-------AAAAGTTACG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1292452 177 + 181584905 TGATTTTCCCACAACCTTCTTGCAACACGCTTCCCACACGGAACACGGCAGCATGATTTTGCATTGACTGTGACACAAAATATT---ATTGGTAAACTTTTAATTCATA-GAAGCAGCCACACCAAGAACTGC-TTAA-CTTTTAGACTTAACTGTTG-TTTTGC-----------------------------------ATTTCATTT-------AAAAGTTACG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 15660 173 - 218577 TGATTTTCCCACAACCTTCTTGCAACACGCTTCCCACACGGAACACGGCAGCATGATTTTGCATTGACTGTGACACAAAATATT---ATTGGTAAACTTTTAATTCATA-GAAGCAGCCACACCAAGAACTGC-TTAA-CTTTCAGAC----CTGTTG-TTTTGC-----------------------------------ATTTCATTT-------AAAAGTTGCG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1386599 175 + 91010382 TGATTTTCCCACAACCTTCTTGCAACACGCTTCCCACACGGAACACGGCAGCATGATTTTGCATTGACTGTGGCACAAAATATT---ATTGGTAAACTTTTAATCCATA-GAAGCAGCCACACCAAGAACTGC-TTAA-CTTTTAGACTTAACTGTTG-TTTTGC-----------------------------------ATTTCAGCT---------GAGTTATG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204152932 178 + 204313951 TGATTTTCTCGCAACCTTCTTGCAGCACACTTCCCACACGGAACACGGCAGCATGATTTTGCATTGACTGTGGCACAAAATAGC---GTTTGTAAACTTTTAATCCATA-GAAGCAGCCATACCAAGAACTGC-TTAA-CTTTGAGAC----CTGTTG-TTTTGC-----------------------------------ATTTCATTTTATTT--AAAAGTTATG i calJac3.chr2 M 577 C 0 s saiBol1.JH378155 16295128 176 + 16417988 TGATTTTCTCACAGCCTTCTTGCAGCACGCTTCCCACACGGAACACGGCAGCATGATTCTGCATGGACTGTGGCACAAAAT--C---ATTTGTAAACTTTTAATCCACA-GAAGCAGCCACACCAAGAACTGC-TTAA-CTTTCAGAA----CTGTTG-TTTTGC-----------------------------------ATTTCATTTTATTT--AAAAGTTATG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 82028 178 - 306014 TGATTTTCTCACAGCCTTCTTGCAGCACACTTCCCACACGGAACACGGCAGCGTGATTTTGCATTGACTGTGGCACAAAATACC---ATTTGTAAACTTTTAATGCATA-GAAGCAGCCACACCAAGAACTGC-TTAA-CTTTTAGAT----CTGTTG-TTTTGC-----------------------------------ATTTCATTTTATTT--AAAAGTTATG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 125850 178 - 211231 TGATTTTCTCACAACCTTCTTGCAGCACGCTTCCCACACGGAACACGGCAGCATGATTCTGCATTGACTGTGGCACAAAAGATC---ATGTGTAAACCTTTAATCCATA-GGAGCAGCCACACCAAGAACTGC-TTAA-CTTTTAGAC----CTGTTG-TTTTGC-----------------------------------ATTTCATTTTATTT--AAAAGTTATG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2113003 218 - 2165740 TGATTTTCTCACAGCCTTCTTGCAACACGCTTCCCACACGGAATACTGCAGCATGATTTTGCATTGACTGTGACAC-AAATATCAAGATTTATAAACTTTTAATCTACA-GA---AGCCATACTAAGAACTGC-TTAA-CCTTTAGACCTAAGTGTTT-TTCTGCTAGTAAGACCATCACCGTAACTTATCCTCACTTCAATTTCATTTTACGTAAAATATTTATC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74327291 161 + 120421639 TGATTTTTTCACAGCCTTCTTGCAATACACTCCCCACACGGAACACTGCAGCATGGTTCTGCATCGACTAT--CATAAAACACC---ATT-ACAAATTTTTAATGCACA-GAAAAAGATAGGTAAAAACTCAT-ACAA-CTTA---------ATATT--TTCTAC-----------------------------------ATTTGATAT----------ATTTATA i mm10.chr13 C 0 C 0 s canFam3.chr34 11940336 170 + 42124431 TGATTTTCTCACAGCCTTCCTGTAACACACTTCCCACACGGAACACAGCAGCATGACTCTGCATCGACTGGAACATAAAATACC---ATTTGTCAATCTTTAATTCACATGAAGCAGCTAGGACTAAAACTGG-TAAACCCTTTAGCT----TTTTTC-TTACGC-----------------------------------ATTTCATTT------------TTAtt i canFam3.chr34 C 0 I 4 s dasNov3.JH577625 353722 172 - 913073 TGATTTTCTCACAGCCTTCCTGCAACACACTTCCTGTACGGAACACTGCAGCATGGTTTTGCATCGACTGTAACACAAAATATC---ACTTGCAAAC--TTAATCCATG------AATCACATCAAGAA-TGT-TAAA-ATTCTACAT----GTTTTT-TTCTAT-----------------------------------ATTCCATTTCTTCTAAAACATGTATG i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 55401 1620 + 100774 M e colAng1.NW_012116910v1 785918 1949 - 1687011 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=5440.000000 s hg38.chr3_KI270934v1_alt 111876 3 + 163458 TAA- s panTro5.chr3 2582213 3 - 202621043 TAA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 169447 3 - 190779 TAA- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 4438 3 + 880730 TAA- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2893599 3 - 123690457 TAA- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179831230 3 - 180051392 TAA- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1292629 3 + 181584905 TAA- i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1386774 3 + 91010382 TAA- i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 787867 3 - 1687011 TAA- i colAng1.NW_012116910v1 M 1949 C 0 s calJac3.chr2 204153110 2 + 204313951 T-A- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16295304 2 + 16417988 T-A- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 82206 3 - 306014 TAA- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 126028 3 - 211231 TAA- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2113221 3 - 2165740 TCA- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74327452 3 + 120421639 CAA- i mm10.chr13 C 0 C 0 s canFam3.chr34 11940510 3 + 42124431 taa- i canFam3.chr34 I 4 I 3374 s dasNov3.JH577625 353894 3 - 913073 -CAC i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 55401 1620 + 100774 M e manLeu1.NW_012101728v1 49283 4520 + 74206 M e cerAty1.NW_012004452v1 15833 0 - 218577 C a score=460962.000000 s hg38.chr3_KI270934v1_alt 111879 52 + 163458 ATTAAACAGAAAAATTAGGAAATTTAGACTATG--AGTTTA---------TTACTCTGAACTT s panTro5.chr3 2582216 52 - 202621043 ATTAAACAGAAAAATTAGGAAATTTAGACTATG--AGTTTA---------TTACTCTGAACTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 169450 52 - 190779 ATTAAACAGAAAAATTAGGAAATTTAGACTATG--AGTTTA---------TTACTCTGAACTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 4441 52 + 880730 ATTAAACAGAACAATTAGGAAATGTAGACTATG--AGTTTA---------TTACTCTGAACTT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2893602 52 - 123690457 ATTAAACAGAAAAATTAGGAAATATAGACTTTG--AGTTTA---------TTACTCTGAATTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179831233 52 - 180051392 ATTAAACAGAAAAATTAGGAAATTCAGACTATG--AGTTTA---------TTACTCTGAACTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1292632 52 + 181584905 ATTAAACAGAAAAATTAGGAAATTCAGACTATG--AGTTTA---------TTACTCTGAACTT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 15833 47 - 218577 --TAAACAGAAAAATTAGGAAATTCAG---ATG--AGTTTA---------TTACTCTGAACTT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1386777 49 + 91010382 ATTAAATAGAAAAATTAGGAAATTCAG---ATG--AGTTTA---------TTACTCTGAACTT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 787870 52 - 1687011 ATTAAACAGAAAAATTAGGAAATTCAGACTATG--AGTTTA---------TTACTCTGAACTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204153112 52 + 204313951 AATTAAAAGAACAATGAGGAAACTCAGACTATG--AGTTCA---------TTACTCTGAACTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16295306 52 + 16417988 ATTAAACAGAACAATGAGGAAACTCAGACTATG--AGTTCA---------TTACTCTGAACTT i saiBol1.JH378155 C 0 I 309 s cebCap1.NW_016108150v1 82209 52 - 306014 ATTAAACAGAACAATGAGGAAACTCAGACTATC--AGTTCA---------TTACTCTGAACTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 126031 52 - 211231 ATTAAACAGAACAATGAGGAAACTCAGACTATG--AGTTCA---------TTACTCTGAACTT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2113224 54 - 2165740 ATTAAACAGAAAAACTAGGAAATTCAGACTATGACAGTTTA---------TTACTCTGaattt i otoGar3.GL873745 C 0 I 10 s mm10.chr13 74327455 41 + 120421639 CTTAAAC--------TAGGAAATTCAGACTATG--AGTTA------------AATTTAAACTT i mm10.chr13 C 0 C 0 s dasNov3.JH577625 353897 61 - 913073 ATTACACAGAAAAACTAGGAAGTGCACACCATG--AGTTTAAACTGAATTTTTAACTGAATTT i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 55401 1620 + 100774 M e canFam3.chr34 11940513 3374 + 42124431 I e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=163309.000000 s hg38.chr3_KI270934v1_alt 111931 30 + 163458 --------------------AAAAATGAAG--------------------------------------------------------------------------------------------------------------------------------TCTTGACTAAAGCTTCTG----AA s panTro5.chr3 2582268 30 - 202621043 --------------------AAAAATGAAG--------------------------------------------------------------------------------------------------------------------------------TTTTGACTAAAGCTTCTG----AA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 169502 30 - 190779 --------------------AAAAATGAAG--------------------------------------------------------------------------------------------------------------------------------TTTTGACTAAAGCTTCTG----AA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 4493 30 + 880730 --------------------AAAAATGAAG--------------------------------------------------------------------------------------------------------------------------------TTCTGACTAAAGCTTCTG----AA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2893654 34 - 123690457 --------------------AAAAATGAAG--------------------------------------------------------------------------------------------------------------------------------TTTTGACTAAAGCTTCTGAATAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179831285 30 - 180051392 --------------------AAAAATGAAG--------------------------------------------------------------------------------------------------------------------------------TTTTGACTAAAGCTTCTG----AA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1292684 30 + 181584905 --------------------AAAAATGAAG--------------------------------------------------------------------------------------------------------------------------------TTTTGACTAAAGCTTCTG----AA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 15880 30 - 218577 --------------------AAAAATGAAG--------------------------------------------------------------------------------------------------------------------------------TTTTGACTAAAGCTTCTG----AA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1386826 29 + 91010382 --------------------AAAAATGAAG--------------------------------------------------------------------------------------------------------------------------------TTTTGACTAAAGC-TCTG----AA i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 787922 30 - 1687011 --------------------AAAAATGAAG--------------------------------------------------------------------------------------------------------------------------------TTGTGACTAAAGCTTCTG----AA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204153164 30 + 204313951 --------------------AAAAATGAAG--------------------------------------------------------------------------------------------------------------------------------TTCTGACTAACGCTTCTG----AA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16295667 27 + 16417988 --------------------aaaaaTGAAG--------------------------------------------------------------------------------------------------------------------------------TTCTGACT---GCTTCTG----AA i saiBol1.JH378155 I 309 C 0 s cebCap1.NW_016108150v1 82261 30 - 306014 --------------------AAAAATGAAG--------------------------------------------------------------------------------------------------------------------------------TTCTGACTAACGCTTCTG----AA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 126083 30 - 211231 --------------------AAAAATGAAG--------------------------------------------------------------------------------------------------------------------------------TTCTGACTAACACTTCTG----AA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2113288 157 - 2165740 --------------------aaaaatggggtattgccatgttgttcaggctggcatcaaactcctggccttaagtgatcctcctgcctcagccttctaaaattctgggattgtaggcttgagccactgcacttggATTACTCTGAATTTTAAAATGAATTTTGATTAAAGCTTTTT----C- i otoGar3.GL873745 I 10 C 0 s mm10.chr13 74327496 22 + 120421639 -----------------------AATGTAA--------------------------------------------------------------------------------------------------------------------------------TTCTTTTT-----TCTTG----GA i mm10.chr13 C 0 C 0 s dasNov3.JH577625 353958 50 - 913073 AAATGGAATTTCCTCAATTTTAAAATGAAG--------------------------------------------------------------------------------------------------------------------------------TTTCGATTGTGTCTTTTA----AA i dasNov3.JH577625 C 0 I 76 e macNem1.NW_012013899v1 55401 1620 + 100774 M e canFam3.chr34 11940513 3374 + 42124431 I e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=141811.000000 s hg38.chr3_KI270934v1_alt 111961 24 + 163458 TAAATGTTTCTATTATATACATAT s panTro5.chr3 2582298 24 - 202621043 TAAGTGTTTCTATTATATACACAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 169532 24 - 190779 TAAATGTTTCTATTATATACACAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 4523 24 + 880730 TAAATGTTTCTATTATATACATAT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2893688 24 - 123690457 TAAATGTTTCTATTACATACATAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179831315 23 - 180051392 TAC-TGTTTCTATTACATACACAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1292714 23 + 181584905 TAC-TGTTTCTATTACATACACAT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 15910 24 - 218577 TACATGTTTCTATTACATACACAT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1386855 24 + 91010382 TACATGTTTCTGTTACATACACAT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 787952 24 - 1687011 CAGATGTTTCTATTACATACACAT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204153194 22 + 204313951 AA--TGTTTCTATTAACTACACGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16295694 22 + 16417988 AA--TGTTTCTATTAACTACACAT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 82291 22 - 306014 AA--TGCTTCTATTAACTACACAT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 126113 22 - 211231 AA--TGTTTCTATTAACTGCACAT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2113445 20 - 2165740 ----TGTTTCTGCTACATGTATGT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74327518 24 + 120421639 GAAAGGGTCTTATTATATATGCAT i mm10.chr13 C 0 I 746 e dasNov3.JH577625 354008 76 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e canFam3.chr34 11940513 3374 + 42124431 I e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=182317.000000 s hg38.chr3_KI270934v1_alt 111985 25 + 163458 CTT-----AGACCCACACACATCCTTTCCA------ s panTro5.chr3 2582322 25 - 202621043 CTT-----AGACCCACACACATCCTTTCCA------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 169556 22 - 190779 CTT-----AGACCCACACACA---TTTCCA------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 4547 25 + 880730 CTT-----AGACCTACACACATCCTTTCCA------ i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2893712 25 - 123690457 CTT-----AGACCCACACACATCCTTTCCA------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179831338 25 - 180051392 CTT-----AGACCCAGACACATCCTTTCCA------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1292737 25 + 181584905 CTT-----AGACCCAGACACATCCTTTCCA------ i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 15934 25 - 218577 CTT-----AGACCCAGACACATCCTTTCCA------ i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1386879 25 + 91010382 CTT-----AGACCCAGACACATCCTTTCCA------ i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 787976 25 - 1687011 CTT-----AGACCCAGACACATCCTTTCCA------ i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204153216 25 + 204313951 CTT-----AGACCCACATGCATGCTTTCCA------ i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16295716 25 + 16417988 CTT-----AGACCCACACACGTGTTTTCCA------ i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 82313 25 - 306014 CTT-----AGACCCACACACATGCTTTCCA------ i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 126135 25 - 211231 CTT-----AGACCCACATACATGCTTTCCA------ i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2113465 36 - 2165740 CTTAACACAGGTCCACATACATCATTTACAGAGTTT i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354008 76 - 913073 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e canFam3.chr34 11940513 3374 + 42124431 I e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=694317.000000 s hg38.chr3_KI270934v1_alt 112010 113 + 163458 GCGGGATACAGCCAGGGTCCAGGACGCCAAGCAGACTGCC----TGTGAGGCACCACGTTC--------CATACGGCTCCACGGCCAACCAGGCAGC-ACTGCCT-------------------CCCCAC-ACCCC--------TGG----------------------CGGGACT------ s panTro5.chr3 2582347 113 - 202621043 GCGGGATACAGCCAGGGTCCAGGACGCCAAGCAGACTGCC----TGTGAGGCACCACGTTC--------CATAGGGCTCCGCGGCCAACCAGGCAGC-GCTGCCT-------------------CCCCAC-ACCCC--------TGG----------------------CGGGACT------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 169578 113 - 190779 GCGGGATACAGCCAGGGTCCAGGACGCCAAGCAGACTGCC----TGTGAGGCACCACGTTC--------CATACGGCTCCGCGGCCAACCAGGCAGC-GCTGCCT-------------------CCCCAC-CCCCC--------TGG----------------------CGGGACT------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 4572 113 + 880730 GTGGGATACAGCCAGGGTCCAGGACGCCAAGCAGACTGCC----TGTGAGGCACCACGTTC--------CATACGGCTCCGCGGCCAACCAGGCAGC-GCTGCCT-------------------CCCCAC-ACCCC--------TGG----------------------CGGGACT------ i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2893737 114 - 123690457 GCGGGATACAGCCGGGGTCCAGGACTCCAAGCAGACTGCC----TGTGAGGCACCATGTTC--------CATACGGCTCAGTGGCCAACCAGGCAGC-GCTGCCT-------------------CCCCACAACCCC--------TGG----------------------TGGGACT------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179831363 113 - 180051392 GTGGGATACAGCCAGGGTCCAGGACTCCAAGCAGACTGCC----TGTGAGGTACCATGTTC--------CACATGGCTCCGTGGCCAACCAGGCAGT-GCTGCCT-------------------CCCCAC-ACCCC--------TGG----------------------CGGGACT------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1292762 113 + 181584905 GTGGGATACAGCCAGGGTCCAGGACTCCAAGCAGACTGCC----TGTGAGGTACCATGTTC--------CACATGGCTCTGCGGCCAACCAGGCAGT-GCTGCCT-------------------CCCCAC-ACCCC--------TGG----------------------CGGGACT------ i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 15959 113 - 218577 GTGGGATACAGCCAGGCTCCAGGACTCCAAGCAGACTGCC----TGTGAGGCATCATGTTC--------CACATGGCTCTGCGGCCAAGCAGGAAAC-GCTGCCT-------------------CCCCAC-ACCCC--------TGG----------------------CGGGACT------ i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1386904 114 + 91010382 GTGGGATACAGCCAGGCTCCAGGACTCCAAGCAGACTGCC----TGTGAGGCACCATGTTC--------CACATGGCTCCGCGGCCAACCAGGCAAT-GCTGCCT------------------CCCCCAC-ACCCC--------TGG----------------------CGGGACT------ i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 788001 113 - 1687011 GTGGGATACAGCCAGGGTCCAGGACTCCAAGCAGACTGCC----TCTGAGGCACCACGTTC--------CACATGGCTCCGCAGCCAAGCAGGCAAC-GCTGCCT-------------------CCCCAC-ACCCC--------TGG----------------------AGGGGCT------ i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204153241 111 + 204313951 GCGGGATACAGCCA-----------------CAGACTGCC----TGTGAGGTGCCATGTTC--------CATATGGCTCTGCGGCCAGCCAGCCAGC-ACCCCCT--------------------CCCAC-ACCCC--------TGGTGGACACGGGACCAG------ATGGGACT------ i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16295741 112 + 16417988 GTGGGACACAGCTA-----------------CAGACTGCC----TGTGAGGTGCCATGTTC--------CATAAGGCTCTGCGGCCAGCCAGGCAGC-ACCCGCT-------------------CCCCAC-ACCCC--------TGGTGGACACAGGACCAC------ACGGGACT------ i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 82338 112 - 306014 GCGGGATACAGCCA-----------------CAGACTGCC----TGTGAGGTGCCATGTTC--------CATGTGGCTCTGTGGCCAGCCAGGCAGC-ACCCCCT-------------------CCCCAC-ACCCC--------TGGTGGACACTGGACCAG------ACGGGACT------ i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 126160 112 - 211231 GCAGGATACAGCCA-----------------CAGACCGCC----TGTGAGGTGCCACGTTC--------CACATGGCTCTGCGGCCAGCCAGGCAGC-ACCCCTT-------------------CCCCAC-ACCCC--------TGGTGGACACGGGACCAG------ACGGGACT------ i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2113501 114 - 2165740 GAGGAACAAAGCCAGTGTCTGTGGTTCTAAGCAGACTTCT----TGTGAGGCACAATGCTC--------TG---------------AACCAGGCAGT-GTCATCT-------------------CCA----AGCCC--------TGG---ACAAATGAGCTGCCTGGTATGGGCCA------ i otoGar3.GL873745 C 0 I 7 s dasNov3.JH577625 354084 159 - 913073 GTGGAACACAGTCAGGATAGATAATTCCATGCTAACTTCTGAAGTATGAGAAACTGGAGGCAGAAAGGGCATACACCTCCACAGGCAACTGGGAAACTGCTACCTGCAGGCCTCGGGCACCAAGCCCCAC-GGCCCGCTCATGAGAG----------------------CCGGGCAGCGGTC i dasNov3.JH577625 I 76 C 0 e mm10.chr13 74327542 746 + 120421639 I e macNem1.NW_012013899v1 55401 1620 + 100774 M e canFam3.chr34 11940513 3374 + 42124431 I e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=1009878.000000 s hg38.chr3_KI270934v1_alt 112123 141 + 163458 CCTGATGTGGGGTC-------TGGTGGTGAACGTGACACGAGCCAG--CAGCCCTG--TGGTGATACACACAAGGAGGA---AC-----TGAGCAGA-GCCCTGCTGAT--GGTGGGGTTGGAACCGAAGGTCTTCAAGG-AGAGGGA----------GGGGCGTGG-------GTGGCTG s panTro5.chr3 2582460 141 - 202621043 CCTGACGTGGGGTC-------TGGTGGTCAACGTGACACGAGCCAG--CAGCCCTG--TGGTGATACACACAAGGAGGA---AC-----TGAGCAGA-GCCCTGCTGAT--GGTGGGGTTGGAACCGAAGGTCTTCAAGG-AGAGGGA----------GGGGCGTGG-------GTGGCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 169691 141 - 190779 CCTGACGTGGGGTC-------TGGTGGTCAACGTGACACGAGCCAG--CAGCCCTG--TGGTGATACACACAAGGAGGA---AC-----TGAGCAGA-GCCCTGCTGAT--GGTGGGGTTGGAACCGAAGGTCTTCAAGG-AGAGGGA----------GGGGCGTGG-------GTGGCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 4685 141 + 880730 CCTGATGTGGGGTC-------TGGTGGTCAACGCGACACGAGCCAG--CAGCCCCG--TGGTGATACACACAAGGAGGA---AC-----TGAGCAGA-GCCCTGCTGAT--GGTGGGGTTGGAAGCGAAGGTCTTCAAGG-AGAGGGA----------GGGGCATGG-------GTGGCTG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2893851 141 - 123690457 CCTGACATGGGGTC-------TGGTGGTCAACGTGACACGAGCCAG--CAGCCCTG--TGGTGATACACACTAGGAGGA---GC-----TGAGCAGA-GCCCTGCTGAT--GGTGGGGTTGGAGCGGAAGGTCTTCAAGG-AGAGGGA----------GGGGCGTGG-------GTGGCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179831476 141 - 180051392 CCTGACGTGGGGTC-------TGGTGGTGAACGTGACACAAGCCAG--CAGCCCTG--TGGTGACACACACTAGGAGGA---GC-----TGAGCAGA-GCCCTGGTGAT--GGTGGGGTTGGAGCCAAAGGTCTTCAGTG-AGAGGGA----------GGGGCGTGG-------GTGGCTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1292875 141 + 181584905 CCTGACGTGGGGTC-------TGGTGGTGAACGTGACACAAGCCAG--CAGCCCTG--TGGTGACACACACTAGGAGGA---GC-----TGAGCAGA-GCCCTGGTGAT--GGTGGGGTTGGAGCCAAAGGTCTTCAGTG-AGAGGGA----------GGGGCGTGG-------GTGGCTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 57021 141 + 100774 CCTGACGTGGGGTC-------TGGTGGTGAACGTGACACAAGCCAG--CAGCCCTG--TGGTGACACACACTAGGAGGA---GC-----TGAGCAGA-GCCCTGGTGAT--GGTGGGGTTGGAGCCAAAGGTCTTCAGTG-AGAGGGA----------GGGGCGTGG-------GTGGCTG i macNem1.NW_012013899v1 M 1620 C 0 s cerAty1.NW_012004452v1 16072 141 - 218577 CCTGACGTGGGGTC-------TGGTGGTGAACGTGACACAAGCCAG--CAGCCCTG--TGGTGACACACACTAGGAGGA---CC-----TGAGCAGA-GCCCTGGTGAT--GGTGGGGTTGGAGCCGAAGGTCTTCAGTG-AGAGGGA----------GGGGCGTGG-------GTGGCTG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1387018 141 + 91010382 CCTGACGTGGGGTC-------TGGTGGTGAACGTGACACAAGAAAG--CAGCCCTG--TGGTGACACAAACTAGGAGGA---GC-----TGAGCAGA-GCCCTGGTGAT--AGTGGGGTTGGAGCCGAAGGTCTTTAGTG-AGAGGGA----------GGGGCGTGG-------GTGGCTG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 788114 141 - 1687011 CCTGACGTGGGGTC-------TGGTGGTGAACGTGACACAGGCCAG--CAGCCCTG--TGGTGACACACACTAGGGGGA---GC-----TGAGCAGA-GTCCTGGTGAT--GGTGGGGTTGGAGCGGAAGGTCTTCAGTG-AGAGGGA----------GGGGCGTGG-------GTGGCTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204153352 118 + 204313951 CCTGACGTGGGGTC-------TGGTGGTGAATG---------------------TG--TGGTGATACACACTAGGAG------C-----TGAGCAGG-GTGCTGATGAT--GGTGGTGTAGGAGCCAAAGGTCTTCAAGG-AGAGGGA-----------GGGCGTGG-------GTGGCTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16295853 118 + 16417988 CCTGACGTGGGGTC-------TGGTGGTAAATG---------------------TG--TGGTGATACACACTAGGAG------C-----TGAGCAGG-GTGCTGATGAT--GGTGGTGTAGGAGCCAAAGGTCTTTGAGG-AGAGGGA-----------GGGCGTGG-------GTGGCTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 82450 118 - 306014 CCTGACGTGAGGTC-------TGGTGGTGAATG---------------------TG--TGGTGATACACACTAGGAG------C-----TGAGCAGA-GTGCTGCTGAT--GGTGGTGTAGGAGCCAAAGGTCTTCGAGG-AGAGGGA-----------GGGCGTGG-------GTGGTTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 126272 116 - 211231 CCTGACGTGGGGTC-------TGGTGGTGAATG---------------------TG--TGGTGATGCACACTAGGAG------C-----TGGGCA---GTGCTGATGAT--GGTGGTGCAGGAGCCAAAGGTCTTCAAGG-AGAGGGA-----------GGGCGTGG-------GTGGCTG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2113622 127 - 2165740 CCTGGTAAGCGGTC-------TGGTGGT-AATGTGACGTGAACCAGCACAGCTCTGCCCAGTGACACTGCCCAAATGAT---ACATGGATGAGCA-----------------GTAGTGCAGAAACAGTAGGTCATCAAGG-AGTGGGA----------AAAGTCAG--------------- i otoGar3.GL873745 I 7 C 0 s dasNov3.JH577625 354243 172 - 913073 CCTGGGGCAGGGGCACGTGGTCGGCGGTAAATGCTAAAGGAGCCAG--CACATCTC--CTCTGGTTAATACAAAGAGGAAATGC-----TGAGTTAATGCAGTGGTGAGCAGTAGGTGCCGAAAGGGGAGGCCATGGACGAAGAGGGAAGAGAAGAAAGGGGCCCAGGACCCCTGCTGCTG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e canFam3.chr34 11940513 3374 + 42124431 I e manLeu1.NW_012101728v1 49283 4520 + 74206 M a score=559617.000000 s hg38.chr3_KI270934v1_alt 112264 56 + 163458 GGGCCCTTGGCCCATC-------TGGCTACT-GTC-TTCTGCCTATTTTGTAGAAGCTCCTTGTA s panTro5.chr3 2582601 56 - 202621043 GGGCCCTTGGCCCATC-------TGGCTACT-GTC-TTCTGCCTATTTTGTAGAAGCTCCTTGTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 169832 56 - 190779 GGGCCCTTGGCCCATC-------TGGCTACT-GTC-TTCTGCCTATTTTGTAGAAGCTCCTTGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 4826 55 + 880730 GGGCCCTTGGCCCATC-------TGGCTACT-GTCTTTCTGCCTA--TTGTAGAAGCTCCTTCTA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2893992 56 - 123690457 GGGCCCTTGGCCCATC-------TGGCTACT-GTC-TTTTGCCTATTTTGTAGAAGCTCCTTGTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179831617 56 - 180051392 GGGCCCTTGGCCCATC-------TGGCTACT-GTC-TTCTGCCTATTTTGTAGAAGCTTCTTATA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1293016 56 + 181584905 GGGCCCTTGGCCCATC-------TGGCTACT-GTC-TTCTGCCTATTTTGTAGAAGCTTCTTATA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 57162 56 + 100774 GGGCCCTTGGCCCATC-------TGGCTACT-GTC-TTCTGCCTATTTTGTAGAAGCTTCTTATA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 16213 56 - 218577 GGGCCCTTGGCCCATC-------TGGCTACT-GTC-TTCTGCCTATTTTGTAAAAGCTTCTTATA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1387159 56 + 91010382 GGGCCCTTGGCCCATC-------TGGCTACT-GTC-TTCTGCCTATTTTGTAGAAGCTTCTTGTA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 53803 56 + 74206 GGGCCCTTGGCCCATC-------TGGCTACT-GTC-TTCTGCCTATTTTCTGGAAGCTTCTTGTA i manLeu1.NW_012101728v1 M 4520 C 0 s colAng1.NW_012116910v1 788255 56 - 1687011 GGGCCCTTGGCCCATC-------TGGCTACT-GTC-TTCTGCCTATTTTGTAGAAGCTTCTTGTA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204153470 56 + 204313951 GGACCCTTGGCCCATC-------TAGCTACT-GTC-TTCGGCCTGTTTTGCAAAGGCTCCTCGTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16295971 56 + 16417988 AGACCTGTGGCCCATC-------TAGCTACT-GTC-TTCGGCCTGTTTTGCAAAAGTTCCTCGTA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 82568 56 - 306014 GGACCTTTGGCCCATC-------TAGCTACT-GTC-TTCTGCCTGTTTTGCAAAAGCTCCTCGTA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 126388 56 - 211231 GGACCCTTGGCCCATC-------TAGCTACT-GTC-TTCGGCCTGTTTGGCAAAAGCTCCTCGTA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2113749 36 - 2165740 GGGCCTGGGA--------------AGCCTCT-GAC-TCTTG----------AGAAACCTCTT--- i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 354415 64 - 913073 Cagccctttgcccatttcctaaatggctactggtc-ttctggtgattctgtagaaggtcctcata i dasNov3.JH577625 C 0 I 4936 e mm10.chr13 74327542 746 + 120421639 I e canFam3.chr34 11940513 3374 + 42124431 I a score=305275.000000 s hg38.chr3_KI270934v1_alt 112320 43 + 163458 CACTGAGTTCCTTCATAGTTTTACTATCACGAGAAAC------------------------------------------GTGCTA s panTro5.chr3 2582657 43 - 202621043 CACTGAGTTCCTTCATAGTTTTACTATCACGAGAAAC------------------------------------------GTGCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 169888 43 - 190779 CACTGAGTTCCTTCATAGTTTTACTATCATGAGAAAC------------------------------------------GTGCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 4881 43 + 880730 CACTGAGTTCCTTCATAGTTTTACTATCACGAGAAAC------------------------------------------GTGCTA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2894048 43 - 123690457 TACTGAGTTCCTTCATAGTTTTACTGTGGTGAGAAAC------------------------------------------GTGCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179831673 43 - 180051392 CACTGACTTCCTTCATAGTTTTACTGTGGCGAGAAAC------------------------------------------GTGCCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1293072 43 + 181584905 CACTGACTTCCTTCATAGTTTTACTGTGGCAAGAAAC------------------------------------------GTGCCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 57218 43 + 100774 CACTGACTTCCTTCATAGTTTTACTGGGACAAGAAAC------------------------------------------GTGCCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 16269 43 - 218577 CACTGACTTCCTTCATAGTTTTACTGTGGCGAGAAAC------------------------------------------GTGCCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1387215 43 + 91010382 CACTGACTTCTTTCATAGTTTTACTGTGGCGAGAAAC------------------------------------------GTGCCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 53859 43 + 74206 CACTGACTTCCTTCATAGTTTTACTGTGGCGAGAAAC------------------------------------------GTGCCA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 788311 43 - 1687011 CACTGACTTCCTTCGTAGTTTTACGGTGGCAAGAAAC------------------------------------------GTGCCA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204153526 85 + 204313951 CACTGGGGTCCATCACAGTTTTACAGTGATGAGGAACTAAGAGAAACAAAATAAGGGTGTAGGTACGTGGCTGGATGAAATGTTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16296027 43 + 16417988 CTCTGGGGTCCGTCACAGTTTCACGGTGATGAGGAGC------------------------------------------GTGCTA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 82624 43 - 306014 CACTGGGGTCCATCACAGTTTTACGGTGATGAGGAAT------------------------------------------GTGCTA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 126444 43 - 211231 CACTGGGGTCCATCACAGTTTTACAGTGATGAGGAAC------------------------------------------GTGCCA i aotNan1.NW_018494784v1 C 0 I 23 s otoGar3.GL873745 2113785 6 - 2165740 ------------------TCTTAC------------------------------------------------------------- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I e canFam3.chr34 11940513 3374 + 42124431 I a score=7735.000000 s hg38.chr3_KI270934v1_alt 112363 2 + 163458 GG s panTro5.chr3 2582700 2 - 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 169931 2 - 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 4924 2 + 880730 GG i gorGor5.CYUI01015759v1 C 0 I 1 s nomLeu3.chr11 2894091 2 - 123690457 TG i nomLeu3.chr11 C 0 I 1 s rheMac8.chr6 179831716 2 - 180051392 TG i rheMac8.chr6 C 0 I 1 s macFas5.chr6 1293115 2 + 181584905 TG i macFas5.chr6 C 0 I 3493 s macNem1.NW_012013899v1 57261 2 + 100774 TG i macNem1.NW_012013899v1 C 0 I 1 s cerAty1.NW_012004452v1 16312 2 - 218577 TG i cerAty1.NW_012004452v1 C 0 I 1 s chlSab2.chr4 1387258 2 + 91010382 TG i chlSab2.chr4 C 0 I 1 s manLeu1.NW_012101728v1 53902 2 + 74206 TG i manLeu1.NW_012101728v1 C 0 I 1 s colAng1.NW_012116910v1 788354 2 - 1687011 TG i colAng1.NW_012116910v1 C 0 I 1 s calJac3.chr2 204153611 2 + 204313951 GT i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 16296070 2 + 16417988 TG i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 82667 2 - 306014 TG i cebCap1.NW_016108150v1 C 0 I 1 s otoGar3.GL873745 2113791 1 - 2165740 -G i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 126487 23 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I e canFam3.chr34 11940513 3374 + 42124431 I a score=151375.000000 s hg38.chr3_KI270934v1_alt 112365 19 + 163458 AGTGGACCTGAAGTTTACT s panTro5.chr3 2582702 19 - 202621043 AGTGGACCTGAAGTTTACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 169933 19 - 190779 AGTGGACCTGAAGTTTACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 4927 19 + 880730 AGTGGACCTGAAGTTTACT i gorGor5.CYUI01015759v1 I 1 C 0 s nomLeu3.chr11 2894094 19 - 123690457 AGTGGACCTGAAGTTTACT i nomLeu3.chr11 I 1 I 1 s rheMac8.chr6 179831719 19 - 180051392 AGTGGACCTGAAGTTTACT i rheMac8.chr6 I 1 I 1 s macFas5.chr6 1296610 19 + 181584905 AGTGGACCTGAAGTTTACT i macFas5.chr6 I 3493 I 1 s macNem1.NW_012013899v1 57264 19 + 100774 AGTGGACCTGAAGTTTACT i macNem1.NW_012013899v1 I 1 I 1 s cerAty1.NW_012004452v1 16315 19 - 218577 AGTGGACCTGAAGTTTACT i cerAty1.NW_012004452v1 I 1 I 1 s chlSab2.chr4 1387261 19 + 91010382 AGTGGACCCGAAGTTTACT i chlSab2.chr4 I 1 I 1 s manLeu1.NW_012101728v1 53905 19 + 74206 AGTGGACCTGAAGTTTACT i manLeu1.NW_012101728v1 I 1 I 1 s colAng1.NW_012116910v1 788357 19 - 1687011 AGTGGACCTGAAGTTTACT i colAng1.NW_012116910v1 I 1 I 1 s calJac3.chr2 204153614 19 + 204313951 GGCAGATCTGAAGTTTTTT i calJac3.chr2 I 1 I 1 s saiBol1.JH378155 16296073 19 + 16417988 GGCAGACCTGAAGTTTTTT i saiBol1.JH378155 I 1 I 1 s cebCap1.NW_016108150v1 82670 19 - 306014 GGCAGACCTGAAGTTTTTT i cebCap1.NW_016108150v1 I 1 I 1 s otoGar3.GL873745 2113792 6 - 2165740 TGCGGA------------- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 126487 23 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I e canFam3.chr34 11940513 3374 + 42124431 I a score=1727419.000000 s hg38.chr3_KI270934v1_alt 112384 179 + 163458 TAGGTATGCTGGGAACTGGGCATCAGCTTTTGCTTCCTGTGGGACACACAGGCACCACCTCCGTGA------TCCCTCCTCCTCCTTGCTTCTCCCTCTAACTGTGCTTTGCTCCACTGACCCTAATTGTCTCTTCCTCTACCAATGCACCTTCGTGGTTCAATTT--GGACATTTCATCTGATTTT s panTro5.chr3 2582721 179 - 202621043 TAGGTATGCTGGGAACTGGGCATCAGCTTTTGCTTCCTGTGGGACACACAGGTACCACCTCCGTGA------TCCCTCCTCCTCCTTGCTTCTCCCTCTAACTGTGCTTTGCTCCACTGACCCTAATTGTCTCTTCCTCTACCAATGCACCTTCATGGTTTAATTT--GGACATTTCATCTGATTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 169952 179 - 190779 TAGGTATGCTGGGAACTGGGCATCAGCTTTTGCTTCCTGTGGGACACACAGGCACCACCTCCGTGA------TCCCTCCTCCTCCTTGCTTCTCCCTCTAACTGTGCTTTGCTCCACTGACCCTAATTGTCTCTTCCTCTACCAATGCACCTTCATGGTTTAATTT--GGACATTTCATCTGATTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 4946 178 + 880730 TAGGTATGCTGGGAACTGGGCATCAGC-TTTGCTTCCTGTGGGACACACAGGCACCACCTCCGTGA------TCCCTCCTCCTCCTTGCTTCTCCCTCTAACTGTGCTTTGCCCCACTGACACTAATTGTCTCTTCCTCTACCGACGCACCTTCATGGTTTAATTT--GGACATTTCATCTGATTTT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2894114 179 - 123690457 TAGGTATGCTGGGAACTGGGTGTCAGCTTTTGCTTCCTGTGGGACAGACAGGTACCACCTCCGTGA------TCCCTCCTCCTCCTTGCTTCTCCCTCTAACTGTGCTTTGCTCCACTGACCCTAACTGTCTCTTCCTCTACCAATGCACCTTCATGGTTTAATTT--GGACATTTCATCTGATTCT i nomLeu3.chr11 I 1 C 0 s rheMac8.chr6 179831739 179 - 180051392 TAGGTGTGCTGGCAACCGGGCGTCAGCTTTTGCTTCCTGTGGGGCAGACAGATACCACCTCCGTGA------TCCCTCCTCCTCCTTGCTTCTCCCTCTAACTCTGCTTTGCTCCACTGACCCTAATTGTTTCCTCCTCTACCAATGCACTTTCATGGTTTAATTT--GGACATTTCATCTGATTTT i rheMac8.chr6 I 1 C 0 s macFas5.chr6 1296630 179 + 181584905 TAGGTGTGCTGGCAACTGGGCGTCAGCTTTTGCTTCCTGTGGGACAGACAGATACCACCTCCGTGA------TCCCTCCTCCTCCTTGCTTCTCCCTCTAACTCTGCTTTGCTCCACTGACCCTAATTGTTTCCTCCTCTACCAATGCACCTTCATGGTTTAATTT--GGACATTTCATCTGATTTT i macFas5.chr6 I 1 C 0 s macNem1.NW_012013899v1 57284 179 + 100774 TAGGTGTGCTGGCAACCGGGCGTCAGCTTTTGCTTCCTGTGGGACAGACAGATACCACCTCCGTGA------TCCCTCCTCCTCCTTGCTTCTCCCTCTAACTCTGCTTTGCTCCACTGACCCTAATTGTTTCCTCCTCTACCAATGCACTTTCATGGTTTAATTT--GGACATTTCATCTGATTTT i macNem1.NW_012013899v1 I 1 C 0 s cerAty1.NW_012004452v1 16335 179 - 218577 TAGGTGTGCTGGCAACCGGGCGTCAGCTTTTGCTTCCTGTGGGACAGACAGATACCACCTCCGTGA------TCCCTCCTCCTCCTTGCTTCTCCCTCTAACTCTGCTTTGCTCCACTGACCCTAATTGTTTCCTCCTCTACCAATGCACCTTCATGGTTTAATTT--GGACATTTCATCTGATTTT i cerAty1.NW_012004452v1 I 1 C 0 s chlSab2.chr4 1387281 179 + 91010382 TAGGTGTGCTGGCAACCGGGCGTCAGCTGTTGCTTCCTGTGGGACAGACAGACACCACCTCCGTGA------TCCCTCCTCCTCCTTGCTTCTCCCTCTAACTCTGCTTTGCTCCCCTGACCCTAATTGTTTCTTCCTCTACCAATGCACCTTCATGGTTTAATTT--GGACATTTCATCTGATTTT i chlSab2.chr4 I 1 C 0 s manLeu1.NW_012101728v1 53925 179 + 74206 TAGGTGTGCTGGCAACCGGGCGTCAGCTTTTGCTTCCTGTGGGACAGACAGATACCACCTCCGTGA------TCCCTCCTCCTCCTTGCTTCTCCCTCTAACTCTGCTTTGCTCCACTGACCCTAATTGTTTCCTCCTCTACCAATGCACCTTCATGGTTTAATTT--GGACATTTCATCTGATTTT i manLeu1.NW_012101728v1 I 1 C 0 s colAng1.NW_012116910v1 788377 179 - 1687011 TAGGTGTGCTGGGAACCGGGCGTCAGCTTTTGCTTCCTGTGGGACAGAGAGGCAAAACCTCCGTGA------TCCTTCCTCCTCCTTGCTTCTCCCTCTAACTCTGCTTTGCTCTACTGACCCTAATTGTCTCTTCCTCTACCAATGCAGCTTCATGGTTTAATTT--GGACATTTCATCTGATTTT i colAng1.NW_012116910v1 I 1 C 0 s calJac3.chr2 204153634 172 + 204313951 TAGGTATGCTGGGAACTAGGTGTCAGCGTTTGCTTCCTGTGGGACGGAGGGGCACCACTTCCCTGATCCCTCCTCCTCCTCCTCCTCGCTTCTCCCTCTAACTCTGCTTTGTTCCTCTGACCCTAATTGTCTCTTCCTCTGCAAATGCAGCTTCATGGTTGA---------------ATCTGATTTC i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 16296093 179 + 16417988 GAGGTACGCTGGGAACTGGGTGTCGGTGTTTGCTTCCTGTGGGACGGACAGGCACCACTTCCCCGA------CCCCACCTCCTCCTCGCTTCTCCCTCTAACTCTGCTTTGCTCCACTGACCCTAATTGTCTCCTCCTCTGCAAATGCACCTTCGTGGTTTAATTT--GAACATTTCATCTGATTTT i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 82690 179 - 306014 TAGGTATGCTGGGAACTGGGTGTCAGTGTTTGCTTCCTATGGGATGGACAGGCACCACTTCCCCGA------CCCCTCCTCCTCCTGGCTTCTCCCTCTAACTCTGCTTTGCTCCACTGACCCTAATTGTCTCCTCCTCTGCAAATGCACCTTCATGGTTTAATTT--GAACATTTCATCTGATTTT i cebCap1.NW_016108150v1 I 1 C 0 s aotNan1.NW_018494784v1 126510 182 - 211231 TAGGTGTGCTGGGAACTGGGTGTCAGTGTTTGCTTCCTGTGGGACGGACAGGCACCACCTCCCCGATCC---CTCCTCCTCCTCCTGGCTTCTCCCTCTAACTCTGCTTTGCTCCACGGACCCTAACTGTCTCCTCCTCTGCAAATGCACCTTCACGGTTTAATTT--GAACATTTCATCTGATTTT i aotNan1.NW_018494784v1 I 23 C 0 s otoGar3.GL873745 2113798 87 - 2165740 -------------------------------------------------AGGCCCCTTATCTCTGG------C----------------------------CTCTGCTATGTTCTGCTGAC-CTGAATACCTCTTCCTCTACCAAC----------------ATTTGGGGGCACTTCATCTAATTTT i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I e canFam3.chr34 11940513 3374 + 42124431 I a score=1151393.000000 s hg38.chr3_KI270934v1_alt 112563 108 + 163458 CCTTAGACTCATACATAATCGTAACACTGTAATGCA---CATC----AACCTAATGGTTTTTCAGGAAGAACAAATGAAAAAA-ATTGCATCTCAGAAT-----CTAGTA-----------TTACATTCTTT s panTro5.chr3 2582900 108 - 202621043 CCTTAGACTCATACATAATCGTAACACTGTAATGCA---CATC----AACCTAATGGTTTTTCAGGAAGAACAAACGAAAAAA-ATTGCATCTCAGAAT-----CTAGTA-----------TTACATTCTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 170131 108 - 190779 CCTTAGACTCATACATAATCGTAACACTGTAATGCA---CATC----AACCTAATGGTTTTTCAGGAAGAACAAATGAAAAAA-ATTGCATCTCAGAAT-----CTAGTA-----------TTACATTCTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 5124 108 + 880730 CCTTAGACTCATACATAATCGTAACATTGTAATGCA---CATC----AACCTAATGGTTTTTCAGGAAGAACAAATGAAAAAA-ATTGCATCTCAGAAT-----CTAGTA-----------TTACATTCTTT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2894293 108 - 123690457 CCTTAGGCTCATACATAATTGGAACACTGTAATGCA---CATC----AACCTCATGGTTTTTCAGGAAGAACAAATGAAAAAA-ACTGCATCTCAGAAT-----CTAGTA-----------TTACATTCTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179831918 108 - 180051392 CCTTGGACTCATACATAATCATGACACTGCAATGCA---CATC----AACCTAATGGTTTTTCAGGAAGAACAAATGAAAAAA-GTTGCATCTCAGAAT-----CTAGTA-----------TTACATTCTTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1296809 108 + 181584905 CCTTAGACTCATACATAATCATGACACTGCAATGCA---CATC----AACCTAATGGTTTTTCAGGAAGAACAAATGAAAAAA-GTTGCATCTCAGAAT-----CTAGTA-----------TTACATTCTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 57463 108 + 100774 CCTTGGACTCATACATAATCATGACACTGTAATGCA---CATC----AACCTAATGGTTTTTCAGGAAGAACAAATGAAAAAA-GTTGCATCTCAGAAT-----CTAGTA-----------TTACATTCTTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 16514 108 - 218577 CCTTAGACTCATACATAATCATGACACTGCAATGCA---CATC----AACCTAATGGTTTTTCAGGAAGAACAAATGAAAAAA-GTTGCATCTCAGAAT-----CTAGTA-----------TTACATTCTTT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1387460 108 + 91010382 CCTTAGACTCATACATAATCATGACACTGCAATGCA---CATC----AACCTAATGGTTTTTCAGGAAGAACAAATGAAAAAA-GTTGCATCTCAAAAT-----CTAGTA-----------TTACATTCTTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 54104 108 + 74206 CCTTAGACTCATACATAATCATGACACTGCAATGCA---CATC----AACCTAATGGTTTTTCAGGAAGAACAAATGAAAAAA-GTTGCATCTCAGAAT-----CTAGTA-----------TTACATTCTTT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 788556 108 - 1687011 CCTTAGACTCATACATAATCATGACACTGCAATGCA---CATC----AACCTAATGGTTTTTCAGGAAGAACAAATGAAAAAA-GTTGCATCTCAGAAT-----CTAGTA-----------TTACATTCTTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204153806 111 + 204313951 CCTTAGACTGACACATAACTGTAACACGGTAATGCA---CATC----AACCTAATGGTTCTTCAGGAAGAACAAACGCAACAC--TTGCATCTTAGAAGGCAG-TAAGTA-----------TCACATTCTTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16296272 111 + 16417988 CCTTAGACTGATACATAACTGTAACACTGTAATGCA---CATC----AACCTAGTGGTTTTTCAGGAAGAACAAATGAAAAAA--CTGCATCTTAGAATGTAG-TAAGTT-----------TCACATTCTTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 82869 112 - 306014 CCTTAGACTGATACATAATTGTAACACTGTAATGCA---CATC----AACCTATTGGTTTTTCAGGAAGAACAAATGAAAAAA--CTGCATCTTAGAATGTAGTTAAGTA-----------TCACATTCTTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 126692 110 - 211231 CCTTAGACTGATACATAATTGTAACACTGTAATGCA---CATC----CACCTAATGGTTTTTCAGGAAGAACAGATGAAAAGA--TTGCATCTTAGAACGTG--TAAGTG-----------TCACATTCTTT i aotNan1.NW_018494784v1 C 0 I 36 s otoGar3.GL873745 2113885 117 - 2165740 CATTAGAC-AATACATAATTGTAAAAGTGTAATGTACATCATC----AACTTAATGGTTTTTAAGGAAGAATAAATGGAAAAATATTGTATCTTAGAAT-----CTAGAAAACACT-----GAACATTCTTT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11943887 121 + 42124431 ccccACAATGATACATAAGTTTAAAATTGTAATGCA---CGCTATCAAATGTTCTGGCCTTTCAGGATAAGGAAATGGAAAAA-ACT--ATCTTAGAAT-----CTAGTAAATGTTAGTTAAaacattcttt i canFam3.chr34 I 3374 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I a score=231174.000000 s hg38.chr3_KI270934v1_alt 112671 36 + 163458 CATGTCCT---TTAGCAGCGACGTTTTCATATCATCTtt s panTro5.chr3 2583008 36 - 202621043 CATGTCCT---TTAGCAGCGATGTTTTCGTATCATCTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 170239 36 - 190779 CATGTCCT---TTAGCAGCGATGTTTTCGTATCATCTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 5232 36 + 880730 CATGTCCT---TTAGCACCGACGTTTTCGTATCATCTTT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2894401 36 - 123690457 CATGTCCT---TTAGCAGCCACGTTTTCATATCATtttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179832026 36 - 180051392 CACGTCCT---TTAGCAGCCACGTTTTCATATCCTTTCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1296917 36 + 181584905 CATGTCCT---TTAGCAGCCACGTTTTCATATCCTTTCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 57571 36 + 100774 CATGTCCT---TTAGCAGCCACGTTTTCATATCCTTTCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 16622 36 - 218577 CATGTCCT---TTAGCAGCCACGTTTTCATATCCTTTCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1387568 36 + 91010382 CATGTCCT---TTAGCAGCCACGTTTTCATATCCTTtct i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 54212 36 + 74206 CATGTCCT---TTAGCAGCCACGTTTTCATATCCTTTCT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 788664 36 - 1687011 CATGTCCT---TTAGCAGCCACGTTTTCATATCCTTtct i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204153917 34 + 204313951 AACACACT---TTAGCAG-GATG-TTTCatatctgtttt i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 16296383 34 + 16417988 CACATCCT---TTAGCAG-GATG-CTTCATATCTGTTTT i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 82981 34 - 306014 CACATTCT---TTAGCAG-GATG-TTTCATATCTGTTTT i cebCap1.NW_016108150v1 C 0 I 1 s otoGar3.GL873745 2114002 38 - 2165740 CCCATCCTTAGTTGTCAAATATTTTTTCTTATCAATTT- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11944008 23 + 42124431 tatattct---tcagtgctcatcttt------------- i canFam3.chr34 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 126802 36 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I a score=2522089.000000 s hg38.chr3_KI270934v1_alt 112707 248 + 163458 tc-----gtatttctggttacattatttcaaggcattttaaa-ttttttgtttgaaatgcgaatgagat-atttactgatgtctgagcagattactgctggcacattgcaaagctactgatttttacatacaaatctcttatacacataccttactacattcttgttttgtttctgttagtttttccgtttattctctggaaattttttggaaattatatctgtaaataatggcaactgtatctattccttttca s panTro5.chr3 2583044 249 - 202621043 TC-----GTATTTCTGGTTACATTATTTCAAGGCATTTTGAATTTTTTTGTTTGAAATGTGAATGGGAT-ATTTACTGATGTCTGAGCAGAttactgctggcacattgcaaagctactgatttttacatacaaatctcttatccacataccttactacattcttgttttgtttctgttagtttttccgtttactctctggaaattttttggaaattatatctgtaaataatggcaactgtatctattccttttca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 170275 249 - 190779 TC-----GTATTTCTGGTTACATTATTTCAAGGCATTTTGAATTTTTTTGTTTGAAATGTGAATGGGAT-ATTTACTGATGTCTGAGCAGAttactgctggcacattgcaaagctactgatttttacatacaaatctcttatccacataccttactacattcttgttttgtttctgttagtttttccgtttactctctggaaattttttggaaattatatctgtaaataatggcaactgtatctattccttttca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 5268 240 + 880730 TC-----GTATTTCTGGTTACATTATTTCAAGGCATTTTAAA-TTTTTTGTTTGAAATGTGAATGAGAT-ATTTCCTGATGTCTGAGCAGATTACTGCTGGCACATTGCAAAGCTACTGATTTTTACATACAAATCTCTTATCCACATACCTTACTACATTCTTGTTT------TGTTAGTTTTTCCG-TTATTCTCTGGAAA-TTTTTGGAAATTATATCTGTAAATAATGGCAACTGTATCTATTCCTTTTCA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2894437 248 - 123690457 tc-----atatttctggttacagtatttcaaggcattttaaa-ttttttgtttgaaatgtgaatgagat-atttactgatgtctgagcagattactgctggcacattgcaaagctactgatttttagatacaaatctcttatccagacaccttactACATTCTTGTTTTGTTTCTGTTAGTTATTCAGTTTATTCTCTGGAAATTTTTTGGAAATTATATCTGTAAATAATGGCAACTGTATCTATTCCTTTTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179832062 247 - 180051392 T------GTATTTCTGGTTACATTATTTCAAGGCATTTTTAA-TTTTTTGTTTGAAATGTGAATGAGAT-ATTTACTGATGTCTAAGCAGAttactgctggcacatcgcaaagctactaatttttagatacaaatctcttatccagacaccttactgcattcttgttttgtttctgttagtttttcagtttattctctgggaattttttggaaattatgtctgtaaataatagcaattgtatcgattccttttca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1296953 247 + 181584905 T------GTATTTCTGGTTACATTATTTCAAGGCATTTTTAA-TTTTTTGTTTAAAATGTGAATGAGAT-ATTTACTGATGTCTGAGCAGAttactgctggcacattgcaaagctactgatttttagatacaaatctcttatccagacaccttactgcattcttgttttgtttctgttaatttttcagtttattctctgggaattttttggaaattacatctgtaaataatagcaattgtattgattccttttca i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 57607 247 + 100774 T------GTATTTCTGGTTACATTATTTCAAGGCATTTTTAA-TTTTTTGTTTGAAATGTGAATGAGAT-ATTTACTGATGTCTAAGCAGATTACTGCTGGCACATCGCAAAGCTACTAATTTTTAGATACAAATCTCTTATCCAGACACCTTACTGCATTCTTGTTTTGTTTCTGTTAGTTTTTCAGTTTATTCGCTGGGAATTTTTTGGAAATTATGTCTGTAAATAATAGCAATTGTATCGATTCCTTTTCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 16658 247 - 218577 T------GTATTTCTGGTTACATTATTTCAAGGCATTTTTAA-TTTTTTGTTTGAAATGTGAATGAGAT-ATTTACTGATGTCTGAGCAGAttactgctggcacatcgcaaagctactgatttttagatacaaatctcttatctagacaccttactgcattcttgttttgtttctgttagtttttcagtttattctctgggaattttttggaaattatgtctgtaaatgatagcaattttatctattccttttca i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1387604 247 + 91010382 t------gtatttctggttacattatttcaaggcatttttaa-ttttttgtttaaaatgtgaatgagat-atttactgatgtctgagcagattactgctggcacatcacaaagctactgatttttagatataaatctcttatccagacaccttactgcattcttgttttgtttctgttaatttttcagtttattctctgggaattttttggaaattacatctgtaaataatagcaattgtattgattccttttca i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 54248 247 + 74206 T------GTATTTCTGGTTACATTATTTCAAGGCATTTTTAA-TTTTTTGTTTAAAATGTGAATGAGAT-ATTTACTGATGTCTGAGCAGAttactgctggcacatcgcaaagctactgatttttagatacaaatctcttatccagacaccttactgcattcttgttttgtttctgttagtttttcagtttattctctgggaattttttggaaattatgtctgtaaatgatagcaattttatctattccttttca i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 788700 247 - 1687011 t------gtatttctggttacattatttcaaggcattttaca-gtttttgtttgaaatgtgaatgagat-atttactgatgtctgagcagattactgctggcacattgcaaagctactgatttttagatacaaatctcttatccagacaccttactgcattcttgttttgtttctgttagtttttcagtttattctctgggaattttttggaaattatgtctgtgaataacagcaattttatcgattccttttca i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204153952 247 + 204313951 c------gtatttctggttatatttattcaaggcattttttg-ttttttgtctgaaaggtgaatgagat-atttactgacgtctgagcggattcctgctggcacattgaaaagctactgaggtttagctacaaacctttcatccagacacctacctacatccttcttttgtttctattagtttttcaatttattctctgggaactttttggaaattgtgtctgtaaataatagcaattatatctattccttttca i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 16296418 247 + 16417988 C------ATATTTCTAGTTACATTTATTCAAGGCATTTTTTG-TATTTTGTCTGAAAGGTGAATGAGGT-ATTTACTGACGTCTGAGTGGATTCCtgctggcacactgaaaagctactgacatttacctacaaacttctcatccagacacctaactacatccttattgtgtttctattagtttttcagtttattctctgggaactttttggaaattgtgtctgtaaataatggcaattatatctattccttttca i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 83016 247 - 306014 G------GTATTTCTAGTTACATTTATTCAAGGCATTTTTTA-TTTTTTGTCTGAAAGGTGAATGAGAT-ATTTACTGATGTCTGAGAGGATTACTGCTGTCACACTGAAAAGTTACTGGCGTTTAGCTACAAGCCTCTCATCCAGACACCTAACTACATACTTATTTTGTTTCTATTAGTTTTTCAGTTTATTCTCTAGGAACTTTTTGGAAATTGTGTCTGTAAATAATGGCAATTATATCTATTCCTTTTCA i cebCap1.NW_016108150v1 I 1 C 0 s aotNan1.NW_018494784v1 126838 243 - 211231 t------atatttctggttatatttatTCAAGGCA--TTTTG-TTTTTTGTCTGAAAGGTGAATGAGAC-A-TTACTGACGTCTGAGCAGCTCACCGCTGGCACGCTGAAAAGCTACTGACGCCT-GCTACAAACCTCTCGTCCAGACACGTAGCTACATCCTTGTTTTGTTTCTATTAGTTTTTCAGTTTATTCTCTGGGAACTTTTTGGAAATTGTGTCTGTAAATAATGGCGATTATATCTATTCCTTTTCA i aotNan1.NW_018494784v1 I 36 C 0 s otoGar3.GL873745 2114040 242 - 2165740 -TA----ATGTTTCTGGTTAAGTTTGTTCAAGGCATTTCATG-TTATT--ACTATAATGTGAATGAGAT-GTTTATTGTTCTCTGACTGGATAACC-CTGCCACACTGAAAAGTTACTCATTTTTTCATATAAGTCTTATATCAAGGCACTTCACTACATTTTTCCACTATTTCTATTAGTTTTTCAGTTTATTCTCATGAAATTTTTAGGAAAGCatatttataaataat---aatattaCCTATTATTTTCCA i otoGar3.GL873745 C 0 I 1 s canFam3.chr34 11944031 218 + 42124431 --tcatactctttagggttaggtttattcaaggcattttaaa-cttttggtctgcactgtgaatgagatgattttctaatg--------gattattgcaggcatgttggaaagctact----------tttgaatcttttatacagatatctc----cattcttgtttt-----tatgagtttctca-cttattgccttgagattttt----aattgtatctgtaagtaatgatacttgt--ccactccttttca i canFam3.chr34 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I a score=24752.000000 s hg38.chr3_KI270934v1_alt 112955 2 + 163458 at s panTro5.chr3 2583293 2 - 202621043 at i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 170524 2 - 190779 at i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 5508 2 + 880730 AT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2894685 2 - 123690457 AT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179832309 2 - 180051392 at i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1297200 2 + 181584905 at i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 57854 2 + 100774 AT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 16905 2 - 218577 at i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1387851 2 + 91010382 at i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 54495 2 + 74206 at i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 788947 2 - 1687011 at i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204154199 2 + 204313951 at i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16296665 2 + 16417988 at i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 83263 2 - 306014 AT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 127081 2 - 211231 AT i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 11944249 2 + 42124431 at i canFam3.chr34 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I e otoGar3.GL873745 2114282 1 - 2165740 I a score=42091.000000 s hg38.chr3_KI270934v1_alt 112957 6 + 163458 ---------atttac----- s panTro5.chr3 2583295 6 - 202621043 ---------atttac----- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 170526 6 - 190779 ---------atttac----- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 5510 6 + 880730 ---------ATTTAC----- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2894687 6 - 123690457 ---------ATTTAC----- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179832311 6 - 180051392 ---------ATTTAC----- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1297202 6 + 181584905 ---------atttac----- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 57856 6 + 100774 ---------ATTTAC----- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 16907 6 - 218577 ---------atttac----- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1387853 6 + 91010382 ---------ATTTAC----- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 54497 6 + 74206 ---------atttac----- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 788949 6 - 1687011 ---------atttac----- i colAng1.NW_012116910v1 C 0 C 0 s cebCap1.NW_016108150v1 83265 6 - 306014 ---------ATTTAC----- i cebCap1.NW_016108150v1 C 0 I 6 s aotNan1.NW_018494784v1 127083 6 - 211231 ---------ATTTAC----- i aotNan1.NW_018494784v1 C 0 I 280 s canFam3.chr34 11944251 20 + 42124431 ACGTAACTGATTTCTATCAC i canFam3.chr34 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I e saiBol1.JH378155 16296667 0 + 16417988 C e calJac3.chr2 204154201 0 + 204313951 C e otoGar3.GL873745 2114282 1 - 2165740 I a score=15555.000000 s hg38.chr3_KI270934v1_alt 112963 4 + 163458 -tgcc s panTro5.chr3 2583301 4 - 202621043 -tgcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 170532 4 - 190779 -tgcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 5516 4 + 880730 -tgcc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2894693 4 - 123690457 -tgcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179832317 4 - 180051392 -tgcc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1297208 4 + 181584905 -tgcc i macFas5.chr6 C 0 I 6467 s macNem1.NW_012013899v1 57862 4 + 100774 -tgcc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 16913 4 - 218577 -tgct i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1387859 4 + 91010382 -TCcc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 54503 4 + 74206 -tgct i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 788955 4 - 1687011 -tgcc i colAng1.NW_012116910v1 C 0 C 0 s canFam3.chr34 11944271 4 + 42124431 TCAC- i canFam3.chr34 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 127089 280 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I e saiBol1.JH378155 16296667 0 + 16417988 C e calJac3.chr2 204154201 0 + 204313951 C e cebCap1.NW_016108150v1 83271 6 - 306014 I e otoGar3.GL873745 2114282 1 - 2165740 I a score=2163.000000 s hg38.chr3_KI270934v1_alt 112967 1 + 163458 a s panTro5.chr3 2583305 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 170536 1 - 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 5520 1 + 880730 a i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2894697 1 - 123690457 g i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179832321 1 - 180051392 g i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1303679 1 + 181584905 g i macFas5.chr6 I 6467 C 0 s macNem1.NW_012013899v1 57866 1 + 100774 g i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 16917 1 - 218577 g i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1387863 1 + 91010382 g i chlSab2.chr4 C 0 I 6359 s manLeu1.NW_012101728v1 54507 1 + 74206 g i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 788959 1 - 1687011 a i colAng1.NW_012116910v1 C 0 C 0 s canFam3.chr34 11944275 1 + 42124431 A i canFam3.chr34 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 127089 280 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I e saiBol1.JH378155 16296667 0 + 16417988 C e calJac3.chr2 204154201 0 + 204313951 C e cebCap1.NW_016108150v1 83271 6 - 306014 I e otoGar3.GL873745 2114282 1 - 2165740 I a score=222426.000000 s hg38.chr3_KI270934v1_alt 112968 43 + 163458 agaccagctgggtcatggaaa-ccctaacccagtggcactagag s panTro5.chr3 2583306 43 - 202621043 agaccagctgggtcatggaaa-ccctaacccagtggcactagag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 170537 43 - 190779 agaccagctgggtcatggaaa-ccctaacccagtggcactagag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 5521 44 + 880730 agaccagctgggtcatggaaacccctaacccagcggcactagag i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2894698 43 - 123690457 aaaccagctgggtcgtggaaa-ccctaacccagcggcagtagag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179832322 43 - 180051392 agaccaactcgatcgtggaga-ccctaacccagcagcactagag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1303680 43 + 181584905 agactagcttggtcgtggaga-ccctaacccagcagcgctagag i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 57867 43 + 100774 agaccaactcgatcgtggaga-ccctaacccagcagcactagag i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 16918 43 - 218577 agaccaactcggttgtggaga-ccctaacccagcagcactagag i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1394223 43 + 91010382 agaccagcttggtcgtggaga-ccctaacccagcagcgctagag i chlSab2.chr4 I 6359 C 0 s manLeu1.NW_012101728v1 54508 43 + 74206 agaccaactcggttgtggaga-ccctaacccagcagcgctagag i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 788960 43 - 1687011 ggaccaacccggttatggaga-ccctaacccagcagcgctagag i colAng1.NW_012116910v1 C 0 C 0 s canFam3.chr34 11944276 43 + 42124431 GTATCACCTGGAAATCAGAAA-AACTAGtcctccaactcaagtg i canFam3.chr34 C 0 I 227 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 127089 280 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I e saiBol1.JH378155 16296667 0 + 16417988 C e calJac3.chr2 204154201 0 + 204313951 C e cebCap1.NW_016108150v1 83271 6 - 306014 I e otoGar3.GL873745 2114282 1 - 2165740 I a score=840020.000000 s hg38.chr3_KI270934v1_alt 113011 162 + 163458 gaagtaaagacacacacacagaaatatagagtgtggagtgggaaatcaggggtctcacagccttcagagccaaaagcctcaaacagagatttacccacgtatttattgacagcaagccagtgataag-acttactgaaagtattccttacaggaaataaaggg s panTro5.chr3 2583349 162 - 202621043 gaattaaagacacacacacagaaatatagagtgtggagtgggaaatcaggggtctcacagccttcagagccaagagccttgaacagagatttacccacgtatttattgacagcaagccagtgataag-acttactaaaagtattccttacaggaaataaaggg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 170580 154 - 190779 gaattaaag--------acagaaatatagagtgtggagtgggaaatcaggggtctcacagccttcagagccaagagccttgaacagagatttacccacatatatattgacagcaagccagtgataag-acttactaaaagtattccttacaggaaataaaggg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 5565 161 + 880730 gaattaaag--acacacacagaaatatagagtgtggagtggggaatcagggatctcacagccttcagagccgagagcctcgaacagagatttacccacgtatttattgacagcaagccagtgataagaacttactaaaagtattccttacaggaaataaaggg i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2894741 161 - 123690457 gaattaaagacacacacacagaaatatagagtgtggagtgggaaatc-ggggtctcacagccttcagagctgagagacttgaacagagatttacccacgtatttactgacagcaagacagtgataag-acttactaaaagcattccttacaggaaataaaggg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179832365 159 - 180051392 gaattaaagacacacaca---gaaaatagcttgtggagcgggatatcaggggtctcacagccttcagagctgagagcctcgaacagagatttacccacatatttactgacagcaagccagtcataag-atttactaaaagtattccttacgggaaacaaaggg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1303723 162 + 181584905 gaattaaagacacacacacagaaatatagcgcgtggggtgggaaatctggggtctcacagccttcagagctgagagcctcaaacagaggtttactcacatatttactgacaacaagccagtcataag-atttactaaaagtattccttacgggaaacaaaggg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 57910 159 + 100774 gaattaaagacacacaca---gaaaatagcttgtggagcgggatatcaggggtctcacagccttcagagctgagagccttgaacagagatttacccacatatttactgacagcaagccagtcataag-atttactaaaagtattccttacgggaaacaaaggg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 16961 159 - 218577 gaattaaagacacacaca---gaaaatagcttgtggagcgggaaatcaggggtctcacagccttcagagctgagagcctcgaacagagatttacccacatatttactgacagcaagccagtcataag-atttactaaaagtattccttacgggaaacaaaggg i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1394266 162 + 91010382 gaattaaagacacacacacagaaatatagcgcgtggggtgggaaatcagggatctcacagccttcagagctgagagcctcgaacagagatttacccacgtatttactgacaacaagccagtcataag-atttactaaaagtattccttatgggaaacaaaggg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 54551 162 + 74206 gaattaaagacacacacacagaaatatagcgcatggggtgggaaatcgggggtctcacagccttcagagctgagagcctcgaacagaggtttacccacatatttactgacagcaagccagtcataag-atttactaaaagtattccttacgggaaacaaaggg i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 789003 162 - 1687011 gaattaaagacacacacacagaactatagcgcgtggggtgggaaatcgggggtctcacagccttcagagctgagagcctccaacagaggtttacccacatatttactgacaacaagccagtcatagg-atttactaaaagtattccttacgggaaacaaaggg i colAng1.NW_012116910v1 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 127089 280 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I e saiBol1.JH378155 16296667 0 + 16417988 C e calJac3.chr2 204154201 0 + 204313951 C e cebCap1.NW_016108150v1 83271 6 - 306014 I e canFam3.chr34 11944319 227 + 42124431 I e otoGar3.GL873745 2114282 1 - 2165740 I a score=561083.000000 s hg38.chr3_KI270934v1_alt 113173 107 + 163458 atgggtctggctagttatctgcagcaggagc-------atgtccttaaggcacagagcgctcatgctattgtttgtggtttaagaaggt-------------cttaagaggttttccactctgggtg s panTro5.chr3 2583511 107 - 202621043 atgggtctggctagttatctgcagcaggagc-------atgtccttaaggcacagattgctcatgctattgtttgtggtttaagaacgt-------------cttaagaggttttccgctctgggtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 170734 107 - 190779 atgggtctggctagttatctgcagcaggagc-------atgtccttaaggcacagatcgctcatgctattgtttgtggtttaagaacgt-------------cttaagaggttttccgctctgggtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 5726 107 + 880730 atgggtctggctagttatctgcagcaggagc-------atgtccttaaggcacagatcgctcatgctattgtttgtggtttaagaacgt-------------cttaagaggttttccgctctgggtg i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2894902 120 - 123690457 atgggtctggctagttatctgcagcaggagc-------atgtccttaaggcacagatcgctcatgctactgtttgtggtttaagactgtggtttaagactgccttaagaggttttctgctctgggtg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179832524 107 - 180051392 atgggtctggctagttatctgcagcaggcac-------acgtccttaaggcacacattgctcatgctattgtttgtggtttaagaaaca-------------cttaagcggttttccaccctgggtg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1303885 106 + 181584905 atgggtctggctagttatctgcagcaggcac-------acgtccttaa-gcacagatcgctcatgctactgtttgtggtttaagaaaca-------------cttaagcggttttccactctgggtg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 58069 107 + 100774 atgggtctggctagttatctgcagcaggcac-------acgtccttaaggcacacattgctcatgctattgtttgtggtttaagaaaca-------------cttaagcggttttccaccctgggtg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 17120 107 - 218577 atgggtctggctagttatctgcagcaggaac-------acgtccttaaggcacacattgctcatgctactgtctgtggtttaagaaaca-------------cttaagcggttttccgccctgggta i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1394428 106 + 91010382 atgggtctggctagttatctgcagcaggaac-------atgttcttaa-gcacagattgctcatgctactgtttgtggtttaggaaacc-------------cttaagcggttttccgccctgggtg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 54713 107 + 74206 atgggtctggctagttatctgcagcaggaac-------acgtccttaaggcacacattgctcatgctactgtttgtggtttaagaaaca-------------cttaagcggttttccgccctgggta i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 789165 106 - 1687011 atgggtctggctagttatctgcagcaggaac-------acgtccttaa-gcacagatcgctcatgctactgtttgtggtttaagaagca-------------cttaagtggttttccgccctgggtg i colAng1.NW_012116910v1 C 0 C 0 s canFam3.chr34 11944546 96 + 42124431 atgactccaggcag-tggcagcagctgtagctcccactagatcccgagggtaaaca-----------accatctgcactcatacaatca-------------tt------gtttttcactttgagta i canFam3.chr34 I 227 I 209 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 127089 280 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I e saiBol1.JH378155 16296667 0 + 16417988 C e calJac3.chr2 204154201 0 + 204313951 C e cebCap1.NW_016108150v1 83271 6 - 306014 I e otoGar3.GL873745 2114282 1 - 2165740 I a score=757758.000000 s hg38.chr3_KI270934v1_alt 113280 152 + 163458 ggccaggtgttccttg-ccctcattacggtaaacccataaccttcctgcgtggtcgtcctggccatcacgagcacgtcaca-tgctgcagagattttgtttatggccagttttggggccagtttatggccacatttgggggcctgtttc---t-atca s panTro5.chr3 2583618 152 - 202621043 ggccaggtgttccttg-ccctcattacggtaaacccataaccttccagcgtgggcgtcatggccatcacgagcatgtcaca-tgctgcagagattttgtttatggccagttttggggccagtttatggccacatttgggggcctgtttc---t-aaca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 170841 152 - 190779 ggccaggtgttccttg-ccctcattccggtaaacccataaccttccagcgtgggcgtcatggccatcaccagcatgtcaca-tgctgcagagattttgtttatggccagttttggggccactttatggccacatttgggggcctgtttc---t-aaca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 5833 154 + 880730 ggccaggtgttccttgcccctcattacggtaaacccacaaccttctggcatgggcgtcatggccatcacgagcatgtcaca-tgctgcagagattttgtttatggccagttttggggccagtttatggccacatttgggggcctgtttc---taaACA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2895022 135 - 123690457 ggccaagtgttccttg-ccctcattatggtaaacccacaaccttctggcacgggcgtcatggccatcatgagcatgtcacagtgctgcagagattttgtttatggccagttttgggga------------------gggggcctgtttc---c-aaca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179832631 129 - 180051392 ggccaggcgttccttg-ccctcattccggaaaacccacaaccttccagcgtgggcgtcatggccatcatgagtatgtcatggtgctgcagagattttgtttatggccag------------------------tttgggggcctgttCC---C-AACA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1303991 153 + 181584905 ggccaggtgttccttg-ccctcattccagtaaactgacagccttccagcgtgggcgtcatggccatcacgagcacgtcacagtgctgcagagattttgtttatggccagttttggggccagtttatggccagatttgggggcctgttcc---c-aaca i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 58176 156 + 100774 ggccaggtgttccttg-ccctcattccggaaaacccacaaccttccagcgtgggcgtcatggccatcacgagcacgtcacagtgctgcagagattttgtttatggccagttttggggccagtttatggccagatttgggggcctgttcccaac-aACA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 17227 152 - 218577 ggccaggtgttccttg-ccctcattccggaaaacccaca-ccttccagcatgggcgtcatggccatcacgagcacgtcacagcgctgcagagattttgtttatggccagtttgggggccagtttatggccagatttgggggcctattcc---c-aaca i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1394534 153 + 91010382 ggccaggtgttccttg-ccctcattccagtaaactgacagccttccagcgtgggtgtcatggccaccacgagcatgtcacagtgctgcagagattttgtttatggccagttttggggccagtttatggccagatttgggggcctgttcc---c-aaca i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 54820 153 + 74206 ggccaggtgttccttg-ccctcattccggaaaacccacaaccttccagtgtgggcgtcatggccatcacgagcccgtcacagcgctgcagagattttgtttatggccagtttgggggccagtttatggccagatttgggggcctgttcc---c-aaca i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 789271 153 - 1687011 ggccaggtgttccttg-ccctcactccggtaaacccacaaccttccagtgtgggcgtcatggccatcaacagtatgtcatggtgctgcagagattttgtttatggccagttttggggccagtttatggccagatttgggggcctgttcc---c-aaca i colAng1.NW_012116910v1 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 127089 280 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I e saiBol1.JH378155 16296667 0 + 16417988 C e calJac3.chr2 204154201 0 + 204313951 C e cebCap1.NW_016108150v1 83271 6 - 306014 I e canFam3.chr34 11944642 209 + 42124431 I e otoGar3.GL873745 2114282 1 - 2165740 I a score=94518.000000 s hg38.chr3_KI270934v1_alt 113432 16 + 163458 atttacctcatttctt s panTro5.chr3 2583770 16 - 202621043 atttacctcatttctt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 170993 16 - 190779 atttacctcatttctt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 5987 16 + 880730 ATTTACCTCATTTCTT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2895157 13 - 123690457 atgta---cgggcctg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179832760 16 - 180051392 ATTTACCTCATTTCTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1304144 16 + 181584905 ATTTACCTCATTTCTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 58332 16 + 100774 ATTTACCTCATTTCTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 17379 16 - 218577 atttacctcatttctt i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1394687 16 + 91010382 ATTTACCTCATTTCTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 54973 16 + 74206 atttatctcatttctt i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 789424 16 - 1687011 atttacctcatttctt i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204154201 12 + 204313951 atttacctcatg---- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16296667 12 + 16417988 atttacctcatg---- i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 2114283 16 - 2165740 ATATGCCACATTTCTT i otoGar3.GL873745 I 1 C 0 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 127089 280 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I e cebCap1.NW_016108150v1 83271 6 - 306014 I e canFam3.chr34 11944642 209 + 42124431 I a score=650027.000000 s hg38.chr3_KI270934v1_alt 113448 79 + 163458 tttttGAT--TGTTACTATTAATAGCCAGAGTCAGCAGAAAAATCCcttcccccaacgaaatgca-t-ttccgcaagcatagg s panTro5.chr3 2583786 79 - 202621043 tttttGAT--TGTTACTATTAATAGCCAGAGTCAGCAGAAAAATCCCTtcccccaacgaaatgca-t-ttctgcaagcttagg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 171009 79 - 190779 tttttGAT--TGTTACTATTAATAGCCAGAGTCAGCAGAAAAATCCCTtcccccaacgaaatgca-t-ttctgcaagcttagg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 6003 79 + 880730 TTTTTGAC--TGTTACTATTAATAGCCAGAGTCAGCAGAAAAATCCcttcccccaacgaaatgca-t-ttctgcaagcatagg i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2895170 80 - 123690457 tttccaacaATGTACCTATTAATAGCCAGAGTCAGCAGAAAAATCCctt-ccccaacgaaacgca-t-ttccacaagcacagg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179832776 79 - 180051392 TTTTTGAT--TCTTACTATTAATAGCCAGAGTCAGCAGAAAAATCCcttcccccaacaaaacgca-t-ttccacaagcacagg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1304160 79 + 181584905 TTTTTGAT--TCTTACTATTAATAGCCAGAGTCAGCAGAAAAATCCcttcccccaacgaaacgca-c-ttccacaagcacagg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 58348 79 + 100774 TTTTTGAT--TCTTACTATTAATAGCCAGAGTCAGCAGAAAAATCCcttcccccaacgaaacgca-c-ttccacaagcacagg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 17395 79 - 218577 tttttgat--tcttactattaatagccagAGTCAGCAGAAAAATCCcttcccccaacgaaacgca-t-ttccacaagcacagg i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1394703 75 + 91010382 TTTTTGAT--TCTTACTATTAATAGCTAGAGTCAGCAGAAAAATCCCTCCCCCCAACGAAACGCA-T-TTCCACAAGCA---- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 54989 79 + 74206 tttttGAT--TCTTACTATTAATAGCCAGAGTCAGCAGAAAAATCCcttcctccaatgaaacgca-t-ttccacaagcacagg i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 789440 79 - 1687011 tttttgat--tcttactattaatagccagAGTCAGCAGAAAAATCCcttcccccaaagaaacaca-t-ttccacgagcacagg i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204154213 76 + 204313951 tttttaat--tcttactattaatagccagagtcagcacaaAAAttcct----ccaatgaaatgcatt-ttccacgagcatggg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16296679 76 + 16417988 tttttaat--tcttactattAATAGCCAGAGTCAGCACAAAAAtccct----ccaatgaaatgcatt-ttccacgagcacagg i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 83277 76 - 306014 TTTTTAAT--TCTTACTATTAATAGCCAGAGTCAGCACAAAAAtcccc----ccaatgaaatgcatt-ttccaccagcacggg i cebCap1.NW_016108150v1 I 6 C 0 s otoGar3.GL873745 2114299 75 - 2165740 ----TCAT--CATTACTA-TATTAGCCAGAATCAGCAAAAAAATTACTTTCCCCATTGGTATGCA-TATTCTACAAGTATTGA i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 127089 280 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I e canFam3.chr34 11944642 209 + 42124431 I a score=453129.000000 s hg38.chr3_KI270934v1_alt 113527 62 + 163458 aagctctg---tttgttcagtgctgactccggcacctcacggagcctgggatacagcaggcacca s panTro5.chr3 2583865 62 - 202621043 aagctctg---tttgttcagtgctgactccggcacctcacggagcctgggatacagcaggcacGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 171088 62 - 190779 aagctctg---tttgttcagtgctgactccggcacctcacggagcctgggatacagcaggcacGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 6082 62 + 880730 aagctctc---tttgttcagtgctgactccggcacctcacggagcctgggatacagcaggcacca i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2895250 62 - 123690457 aagctctg---tttgttcagtgccgactccagcacctcacggagcctgggatacagcaggcacca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179832855 58 - 180051392 aagc-------tttgttcagtgctgactccagcatctcacggagcctgcgatacagcaggcacca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1304239 62 + 181584905 aagctctg---tttgttcagtgctgactccagcatctcacggagcctgcgatacagcaggcacca i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 58427 62 + 100774 aagctctg---tttgttcagtgctgactccagcatctcacggagcctgcgatacagcaggcacca i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 17474 62 - 218577 aagctctg---tttgttcagtgctgactccagcatctcacggagcctgcgatacagcaggcacca i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1394778 57 + 91010382 -----CTG---tttgttcagtgctgactccagcatctcacggagcctgcgatacagcaggcacca i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 55068 60 + 74206 aag--ctg---tttgttcagtgctgactccagcatctcacggagcctgcgatacagcaggcacca i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 789519 62 - 1687011 aagctctg---tttgttcagtgctgactccagcatctcacggagcctgcaatacagcaggcacca i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204154289 51 + 204313951 aacttctg---tttgttcagtgctgactccagcatctcacagagcctagcatac----------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16296755 51 + 16417988 aacttctg---tttgttcagtgctgacgccagcatctcacagagcctggcatac----------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 83353 51 - 306014 aacttctg---tttgttcagtgctgactctagcatctcacagagcctggcatac----------- i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2114374 44 - 2165740 GAACTTTTGTCTTTGTTCAGTGCTAATTCTAGCATCTCAAGGTA--------------------- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11944851 13 + 42124431 aagaTCTG---TATGT------------------------------------------------- i canFam3.chr34 I 209 C 0 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 127089 280 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I a score=1410301.000000 s hg38.chr3_KI270934v1_alt 113589 132 + 163458 agacacaccttgttTGGTGGGAACACTTCTAGTA-TTCTCACTTCAAACTATCTCA--GATTTGCCATTTCTATATCCTAAGGC--ATGTTCCCATTCTCTAACGCAAGGGTTCCTTCTTTCCCAGCTGGCCTCCAA--------------- s panTro5.chr3 2583927 132 - 202621043 AGACACACCTTGTTTGGTGGGAACACTTCTAGTA-TTCTCACTTCAAACTATCTCA--GATTTGCCATTTCTCTATCCTAAGGC--ATGTTCCCATTCTCTAATGCAAGGGTTCCTTCTTTCCCAGCTGGCTTCCAA--------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 171150 132 - 190779 AGACACACCTTGTTTGGTGGGAACACTTCTAGTA-TTCTCACTTCAAACTATCTCA--GATTTGCCATTTCTCTATCCTAAGGC--ATGTTCCCATTCTCTAATGCAAGGGTTCCTTCTTTCCCAGCTGGCTTCCAA--------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 6144 132 + 880730 agacacaccttgttTGGTGGGAACACTTCTAGTA-TTCTCACTTCAAACTATCTCA--GGTTTGCCATTTCTATATCCTAAGGC--ATGTTCCCATCCTCTAATGCAAGGGTTCCTTCTTTCCCAGCTGGCCTCCAA--------------- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2895312 132 - 123690457 agacacaccttgttTGGTGGGAACACTTCTAGTA-TTCTCACTTCAAACTATCTCA--GATTTGCCATTTCTATATCCTAAGGC--CTGTTCCCATTCTCTAATGCAATGGTTCCTTCTTTCCCAGCTGGCCTCCAA--------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179832913 134 - 180051392 agacacaccttgtttggtgagaatGTTTCTAGTA-TTCTTACTTCAAACTGTCTCACGGATTTGCCATTTCTGTATCCTAAGGC--ATGTTCCCATTCTCTAATACAATGGTTCCTTCTCTCACAGCTGGCCTCCAA--------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1304301 134 + 181584905 agacacaccttgtttggtgagaatGTTTCTAGTA-TTCTCACTTCAAACTGTCTCACGGATTTGCCATTTCTGTATCCTAAGGC--ATGTTCCCATTCTCTAATGCAATGGCTCCTTCTCTCACAGCTGGCCTCCAA--------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 58489 134 + 100774 agacacaccttgtttggtgagaatGCTTCTAGTA-TTCTCACTTCAAACTGTCTCACGGATTTGCCATTTCTGTATCCTAAGGC--ATGTTCCCATTCTCTAATGCAATGGTTCCTTCTCTCACAGCTGGCCTCCAA--------------- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 17536 134 - 218577 agacacaccttgtttggtgagaatGCTTCTAGTA-TTCTCACTTCAAACTGTCTCACGGATTTGCCATTTCTGTATCCTAAGGC--ATGTTCCCATTCTCTAATACAATGGTTCCTTCTCTCACAGCTGGCCTCCAA--------------- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1394835 134 + 91010382 agacacaccttgtttggtgagaatGTTTCTAGTA-TTCTCACTTCAAACTGTCTCACGGATTTGCCATTTCTGTATCCTAAGGC--ATGTTCCCATTCTCTAATGCAATGGTTCCTTCTCTCAAAGCTGGCCTCCAA--------------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 55128 134 + 74206 agacacaccttgtttggtgagaatGCTTCTAGTA-TTCTCACTTCAAACTGTCTCACGGATTTGCCATTTCTGTATCCTAAGGC--ATGTTCCCATTCTCTAATACAATGGTTCCTTCTCTCACAGCTGGCCTCCAA--------------- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 789581 134 - 1687011 agacacaccttgtttggtgagaatgCTTCTATTA-TTCTCACTTCAAACTGTCTCACGGATTTGCCATTTCTGTATCCTAAGGC--ATGTTCCCACTCTCTAATGCAATGGTTCCTTCTCTCACAGCTGGCCTCCAA--------------- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204154340 134 + 204313951 agACACACCTTGTTTGGTGGGAATGCTTCTAGTA-TTCTCACTTCAAAATATCTCATGAATTTGCCATTTCTACATCCTAAGGC--ACCTTCCCATTCTCTAGTGCAATGATTCCTTCTTTCCTAGCTGGCCTCCAA--------------- i calJac3.chr2 C 0 I 132 s saiBol1.JH378155 16296806 134 + 16417988 agACACACCTTGTTTGGTAGGAATGCTTCCAGTA-TTCTCACTTCAAAATATCTCATGAATTTGCCATTTCTATATCCTAAGGC--ACCTTCCCATTCTCTAGTGCAATGATTCCTTCTTTCTTAGCTGGCCTCCAA--------------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 83404 134 - 306014 agACACACCTTGTTTGGTGGGAATGCTTCTAGTA-TTCTCACTTCAAAATATCTCATGAATTTGCCATTTCTATATCCTAAGGC--ACCTTCCCATTCTCTAGTGCCATGATTCCTTCTTCCCCAGCTGGCCTCCAA--------------- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 127369 134 - 211231 AGACACACCTCGTTTGGTGGGAGTGCTTCTAGTA-TTCTCACTTCAAAATATCTCATGGATTTGCCATTTCTATACCCTAAGGC--ACCTTCCCATTCTCTAGTGCAATGATTCCTTCTTTCCTAGCTGGCCTCCAA--------------- i aotNan1.NW_018494784v1 I 280 C 0 s otoGar3.GL873745 2114418 115 - 2165740 ----------TATTTGTTAGA---------GGTA-TTCCCATTCTAAA--ATCTGATGAATGTGCCATATCTACATCCTAACACAAAGGTTCCTGTTACCAAACGCAATGATTACACCTGTCCTTGCTGGCCTCTGA--------------- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11944864 142 + 42124431 ------GCCTTACTTGGTGGAAATGTTTCTAGGACTTCCCATTTCAAAATATC--ATGGGTTCATCATTTCCACACCCAAATAG--AATTTCCTACTATATAGTGCAAGGATTATATCTGTCGTAGCTGGTGGCCATTCCCCGGTATCAATA i canFam3.chr34 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I a score=974912.000000 s hg38.chr3_KI270934v1_alt 113721 92 + 163458 CCCTACAAAAGCACTGCAGGGCATCACTCAGC-----------------CTTCTGTGCCT-TAGTCACGCTGTTCTTCTCACCGTTCCACAAAACCTCCCTCAAGCCCAG s panTro5.chr3 2584059 92 - 202621043 CCCTACAAAAGCACTGCAGGGCATCACTCAGC-----------------CTTCTGTGCCT-TAGTCACGCTGTTCTTCTCACCGTTCCACAAAGCCTCCCTCAAGCCCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 171282 92 - 190779 CCCTACAAAAGCACTGCAGGGCATCACTCAGC-----------------CTTCTGTGCCT-TAGTCACGCTGTTCTTCTCACCGTTCCACAAAGCCTCCCTCAAGCCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 6276 92 + 880730 CCCTACAAAAGCACTGCAGTGCATCACTCAGC-----------------CTTCTGTGCCT-TAGTCACGCTGTTCTTCTCACCATTCCACAAAGCCTCCCTCAAGCCCAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2895444 92 - 123690457 CCCTACAAAAGCACTGCAGGGCATCACTCAGC-----------------CTTCTGTGCCT-TAGTCACGCTGTTCTTCTCACCTTTCCACAAAGCCTCCCTCAAGCCCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179833047 92 - 180051392 CCCTACAAAAGTACTGCAAGGCATCACTCAGC-----------------CTTCTGTGCCT-TAATCACGCTATTCTTCTCACCGTTCCAGAAAGCCTCCCTCAAGCTCAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1304435 89 + 181584905 CCCTACAAAAGTACTGCAGGGCATCCCTTAGC-----------------CTTCCGTGCCT-TAGTCACACCG---TTCTCACCGTTCCACAAAGCCTCCTTCAAGCCCAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 58623 92 + 100774 CCCTACAAAAGTACTGCAAGGCATCACTCAGC-----------------CTTCTGTGCCT-TAATCACGCTATTCTTCTCACCGTTCCAGAAAGCCTCCCTCAAGCTCAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 17670 89 - 218577 CCCTACAAAAGTACTGCAGAGCATCCCTTAGC-----------------CTTCTGTGCCT-TAGTCACACTG---TTCTCACCGTTCCACAAAGCCTCCTTCAAGCCCAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1394969 92 + 91010382 CCCTACAAAAGTACTGCAGGGCATCCCTTAGC-----------------CTTCTGTGCCT-TAGTCACGCTGTTCTTCTCACCGTTCCACAAAGCCTCCCTCAAGCCCAG i chlSab2.chr4 C 0 I 156 s manLeu1.NW_012101728v1 55262 89 + 74206 CCCTACAAAAGTACTGCAGAGCATCCCTTAGC-----------------CTTCTGTGCCT-TAGTCACACTG---TTCTCACCGTTCCACAAAGCCTCCTTCAAGCCCAG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 789715 92 - 1687011 CCCTACAAAAGTACTGCAAGGCACCACTCAGC-----------------CTTCTGTGCCT-TAGTCACACTGTTCTTCTCACCGTTCCACAAAGCCTCCCTCAAGCTCAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204154606 89 + 204313951 CCCTACAAAAGTCCTGCAGGATATCCCTCAGC-----------------CTTCTGGGCCT-TAGTCATGCTG---TTCTCAGCATTCCACAAAGCCTCTCTCAAGCCCAG i calJac3.chr2 I 132 C 0 s saiBol1.JH378155 16296940 89 + 16417988 CCCTACAAAAGTCCTGCAGGGCATCCCTCAGC-----------------CTTCTGTGCCT-CAGTCATGCTG---TTCTCAGCATTCCACAAAGCCTCCCTCAAGCCCAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 83538 89 - 306014 CCCTACAAAAGTCCTGCAGGGCATCCCTCAGC-----------------CTTCTGTGCCT-TGGTCATGCTG---TTCTTGGCATTCCACAAAGCCTCCCTCATGCCCAG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 127503 89 - 211231 CCCTACAAAAGTCCTGCAGGGCATCCCTCGGC-----------------CTTCCGTGCCT-TAGTCATGCTG---TTCTCAGCATTCCGCAAAGCCTCCCTCAAGCCCAG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2114533 89 - 2165740 -CGTACTGAAGTTCTGCAGAGCATCACTTGAC-----------------CTTCTGTACCTCTACTCATGTTA---TTCTTCTGGCTCCATGAAGCCTCCCTCAAGCCCAG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11945006 109 + 42124431 CCCTGCAAAAGTTCTGCTCAGTTCCTCTTGGCTGGTTTCCTAAAACAAACCTCTGCCTTT-CACTCGCACTATTCGCCTTACCTTTCCAGGAAGTTTCCCTAAAGCCCAG i canFam3.chr34 C 0 I 1 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I a score=1004387.000000 s hg38.chr3_KI270934v1_alt 113813 125 + 163458 CCTCACCTGAAGACCGAAGGGCACGGGCCTCTGAAAATTGT-CAGCAGGGAACCTGTTCTCT--------TGTG------TC------------TAACACCAAATGCC--TTTCAGAATAGGACTAAAGCAGTGGACT---TCTTTCTAGAAAATA----C---- s panTro5.chr3 2584151 124 - 202621043 CCTCACCTGAAGACTGAAGGGCACGGGCCTCTGAAAA-TGT-CAGCAGGGTACCTGTTCTCT--------TGTG------TC------------TAACACCAAATGCC--TTTCAGAATAGGACTAAAGCAGTGGACT---TCTTTCTAGAAAATA----C---- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 171374 124 - 190779 CCTCACCTGAAGACTGAAGGGCACGGGCCTCTGAAAA-TGT-CAGCAGGGTACCTGTTCTCT--------TGTG------TC------------TAACACCAAATGCC--TTTCAGAATAGGACTAAAGCAGTGGACT---TCTTTCTAGAAAATA----C---- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 6368 124 + 880730 CCTCACCTGAAGACCGAAGGGCACGGGCCTCTGAAAA-TGT-CAGCAGGGAACCTGTTCTCT--------TCTG------TC------------TAACACCAAACGCC--TTTCAGAATAGGACTAAAGCAGTGGACT---TCTTTCTAGAAAATA----C---- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2895536 124 - 123690457 CCTCACTTGAAGACTGAAGGGCACAGGCCTCTGAAAA-TGT-CAGCAGCGAACCTGTTCTCT--------TGTG------TC------------TAACACCAAATGCC--TTTCAGAATACGACTAAAGCAATGGACT---TCTTTTCAGAAAATA----T---- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179833139 125 - 180051392 TCTTACTTCAAGACTGAAGGGCACAGGCCTCTGAAAA-TGT-CAGCAGGGAACCTGTTCTCT--------TGTG------TCT-----------TAACACCATATGCC--TTTCAGAATAGGACTAAAGCAATGGACT---TCTTTTTAGAAAATA----C---- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1304524 125 + 181584905 CCTCACTTGAAGACCGAAGGGCACAGGCCTCTGAAAA-TGT-CAGCAGGGAACCTGTTCTCT--------TGTG------TCT-----------TAACACCAAACGCC--TTTCAGAATAGGACTAAAGCAATGGACT---TCTTTTTAGAAAATA----T---- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 58715 125 + 100774 TCTTACTTCAAGACCGAAGGGCACAGGCCTCTGAAAA-TGT-CAGCAGGGAACCTGTTCTCT--------TGTG------TCT-----------TAACACCAAACGCC--TTTCAGAATAGGACTAAAGCAATGGACT---TCTTTTTAGAAAATA----C---- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 17759 125 - 218577 CCTCACTTGAAGACCGAAGGGCACAGGCCTCTGAAAA-TGT-CAGCAGGGAACGTGTTCTCT--------TGTG------TCT-----------TAACACCATATGCC--TTTCAGAATAGGACTAAAGCAATGGACT---TCTTTTTAGAAAATA----C---- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1395217 125 + 91010382 CCTCACTTCAGGACTGAAGGGCACAGGCCTCTGAAAA-TGT-CAGCAGGGAACCTGTTCTCT--------TGTG------TCT-----------TAACACCAAACGCC--TTTCAGAACAGGACTAAAGCAATGGACT---TCTTTTTAGAAAATA----C---- i chlSab2.chr4 I 156 C 0 s manLeu1.NW_012101728v1 55351 125 + 74206 CCTCACTTGAAGACCGAAGGGCACAGGCCTCTGAAAA-TGT-CAGCAGGGAACCTGTTCTCT--------TGTG------TCT-----------TAACACCAAACGCC--TTTCAGAATAGGACTAAAGCAATGGACT---TCTTTTTAGAAAATA----C---- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 789807 125 - 1687011 CCTCACTTGAAGACTGAAGGGCACAGGCCTGTGAAAA-TGT-CAGCAGGGAACCTGTTCTCT--------TGTG------TCT-----------TAACACCATATGCC--TTTCAGAATAGCACTAAAGCAATGGACT---TCTTTTTAGAAAATA----C---- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204154695 127 + 204313951 CCTCACTTGAAGAATGAAGTGCACAGGCCTCTGACAA-TGT-CAGCAGGAACCTT-TGCTCTTGTGTC--TGTG------TCT----------GCAACACCAAATGCC---TTTGGAATAGGACAAAAGCA-TGGA------CTTTTTA-CAAATATT--C---- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16297029 132 + 16417988 CCTCACTTAAAGAATGAAGTGCACAGGCCTCTGAGAA-TGT-CAGCAGGAAACTT-TGCTCTTGTGCCTGTGTG------TCT----------GCAACACCAAACGCC---TTCGGAATAGGACAAAATCA-TGGA------CTTTGTAGAAAATACTCAC---- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 83627 122 - 306014 CCTCACTTGAAGAATGAAGTGCACAGGCCTCTGAGAA-TGT-CAGCAGGAAAC---TGCTCT--------TGTG------TCT----------GCAACACCAAACGCC---TTTGGAATAGGACAAAAGCA-TGGA------CTTTTTAGAAAATACTCAC---- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 127592 132 - 211231 CCTCACTTGAAGAATGAAGTGCACAGGCCTCTGAGAA-TGT-TAGCAGGAACCTT-TGCTCTTGTGTCTGTGTG------TCT----------GCAACACCAAACACC---TTCGGAACAGGACAAAAGCA-TGGA------CTTTTTAGAAGATACTCAC---- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2114622 137 - 2165740 -TCCATCTGGAGACAGAAACACTTAGACC--TGAGAA-TGG-TAGAGGGTAATCTTATCTCT--------TTTGGTGGTCTCTA----AGTGTGTGCCACTGGACTCCCTCTTCAGAATGTGACTAAAGCAATAGACT---TCTTTTTAGAAAATG----C---- i otoGar3.GL873745 C 0 I 263 s canFam3.chr34 11945116 125 + 42124431 ACTTCTCTGAAGTT-------------CCTACAGAAG-TATGCAGTATGCAACTT-TTTTCT--------TTTG------ATGATTAGAGTTTGTGCCACTGGACGCT----TCAGGATAGAACTAAAA---GGGACTTCCTCTTTTCGGAAAACG----TCTCC i canFam3.chr34 I 1 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I a score=664793.000000 s hg38.chr3_KI270934v1_alt 113938 57 + 163458 GCAGAAATTCTTGCAAAT-------AGCAGACAAGAGATCTCATTCATGGA-CAAGAATCCTTGT s panTro5.chr3 2584275 57 - 202621043 GCAGAAATTCTTGCAAAT-------AGTAGACAAGAGATCTCATTCATGGA-CAAGAATCCTTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 171498 57 - 190779 GCAGAAATTCTTGCAAAT-------AGTAGACAAGAGATCTCATTCATGGA-CAAGAATCCTTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 6492 57 + 880730 ACAGAAATTCTTGCAAAT-------AGTAGACAAGAGATCTCATTCATGGA-CAAGAATCCTTGT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2895660 57 - 123690457 GCAGAAATTCTTGCAAAT-------AGTAGACAAGAGATCTCATTCTTGGA-CAAGAATCCTTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179833264 57 - 180051392 GCAGAAATTCTTGCAAAT-------AGTAGACAAGAGATCTCATTCATGGA-CAAGAATCCTTGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1304649 57 + 181584905 GCAGAAATTCTTCCAAAT-------AGTAGACAAGAGATCTCATTCATGGA-CAAGAATCCTTGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 58840 57 + 100774 GCAGAAATTCTTGCAAAT-------AGTAGACAAGAGATCTCATTCATGGA-CAAGAATCCTTGT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 17884 57 - 218577 GCAGAAATTCTTGCAAAT-------AGTAGACAAGAGATCTCATTCATGGA-CAAGAATCCTTGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1395342 57 + 91010382 GCAGAAATTCTTGCAAAT-------AGTAGACAAGAGATCTCATTCATGGC-CAAGAATCCTTGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 55476 57 + 74206 GCAGAAATTCTTGCAAAT-------AGTAGACAAGAGATCTCATTCATGGA-CAAGAATCTTTGT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 789932 57 - 1687011 GCAGAAATTCTTGCAAAT-------AGTGGACAGGAGATCTCATTCATGGA-CAAGAATCCTTGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204154822 57 + 204313951 ACGGAAATTCTTGCTAAT-------AGTAAACAAGAGACCTCATTCATGAA-CAAGAATCCTTGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16297161 57 + 16417988 ACAGAAATTCTTGCCAAC-------AGTAAACAAGAGATCTCATTCATGGA-CAAGAATCCTTGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 83749 57 - 306014 GCAGAAATTCTTGCCAAT-------AGTAAACAAGAGATCTCATTCATGGA-CAAGAATCCTTGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 127724 57 - 211231 GCATAAATTCTTGCCAAT-------AGTCAACAAGAGATCTCATTCATGGA-CAAGAATTCTTGT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2115022 63 - 2165740 GAAGAAATTCTTATAAACAACCTCAAGGAGACA-GAGATCTCATTCACAGA-CAAGAATCCCTAT i otoGar3.GL873745 I 263 I 414 s canFam3.chr34 11945241 62 + 42124431 ACAGAAA-TCTTGCAAATGACTTCAACTGGACA-GAGATCTCATTTGTGGACCAAGAATCCCTG- i canFam3.chr34 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I a score=73528.000000 s hg38.chr3_KI270934v1_alt 113995 6 + 163458 TATTAG s panTro5.chr3 2584332 6 - 202621043 TATTAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 171555 6 - 190779 TATTAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 6549 6 + 880730 TATTAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2895717 6 - 123690457 TATTAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179833321 6 - 180051392 TATTAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1304706 6 + 181584905 TATTAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 58897 6 + 100774 TATTAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 17941 6 - 218577 TATTAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1395399 6 + 91010382 TATTAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 55533 6 + 74206 TATTAG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 789989 6 - 1687011 TATTAG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204154879 6 + 204313951 TATTAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16297218 6 + 16417988 TATTAG i saiBol1.JH378155 C 0 I 149 s cebCap1.NW_016108150v1 83806 6 - 306014 TACTAG i cebCap1.NW_016108150v1 C 0 I 149 s aotNan1.NW_018494784v1 127781 6 - 211231 TATTAG i aotNan1.NW_018494784v1 C 0 I 149 s canFam3.chr34 11945303 6 + 42124431 TATTAG i canFam3.chr34 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I e otoGar3.GL873745 2115085 414 - 2165740 I a score=37480.000000 s hg38.chr3_KI270934v1_alt 114001 3 + 163458 AGG s panTro5.chr3 2584338 3 - 202621043 AGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 171561 3 - 190779 AGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 6555 3 + 880730 AGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2895723 3 - 123690457 AGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179833327 3 - 180051392 AGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1304712 3 + 181584905 AGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 58903 3 + 100774 AGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 17947 3 - 218577 AGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1395405 3 + 91010382 AGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 55539 3 + 74206 AGG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 789995 3 - 1687011 AGG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204154885 3 + 204313951 AGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16297373 3 + 16417988 AGG i saiBol1.JH378155 I 149 C 0 s cebCap1.NW_016108150v1 83961 3 - 306014 AGG i cebCap1.NW_016108150v1 I 149 C 0 s aotNan1.NW_018494784v1 127936 3 - 211231 AGG i aotNan1.NW_018494784v1 I 149 C 0 s canFam3.chr34 11945309 3 + 42124431 AAG i canFam3.chr34 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I e otoGar3.GL873745 2115085 414 - 2165740 I a score=75895.000000 s hg38.chr3_KI270934v1_alt 114004 7 + 163458 aattgag s panTro5.chr3 2584341 7 - 202621043 aagtcag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 171564 7 - 190779 aagtcag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 6558 7 + 880730 aattcag i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2895726 7 - 123690457 aattcag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179833330 7 - 180051392 aattcag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1304715 7 + 181584905 aattcag i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 58906 7 + 100774 aattcag i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 17950 7 - 218577 aattcag i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1395408 7 + 91010382 aattcag i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 55542 7 + 74206 aattcag i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 789998 7 - 1687011 aattcag i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204154888 7 + 204313951 AACTCAG i calJac3.chr2 C 0 I 146 s saiBol1.JH378155 16297376 7 + 16417988 aactcgg i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 83964 7 - 306014 aactcag i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 127939 7 - 211231 aactcag i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2115499 7 - 2165740 aattcag i otoGar3.GL873745 I 414 I 1 s canFam3.chr34 11945312 7 + 42124431 AATCTGG i canFam3.chr34 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I a score=13923.000000 s hg38.chr3_KI270934v1_alt 114011 1 + 163458 t s panTro5.chr3 2584348 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 171571 1 - 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 6565 1 + 880730 t i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2895733 1 - 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179833337 1 - 180051392 t i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1304722 1 + 181584905 t i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 58913 1 + 100774 t i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 17957 1 - 218577 t i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1395415 1 + 91010382 t i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 55549 1 + 74206 t i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 790005 1 - 1687011 t i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204155041 1 + 204313951 t i calJac3.chr2 I 146 C 0 s saiBol1.JH378155 16297383 1 + 16417988 t i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 83971 1 - 306014 t i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 127946 1 - 211231 t i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2115507 1 - 2165740 t i otoGar3.GL873745 I 1 C 0 s canFam3.chr34 11945319 1 + 42124431 T i canFam3.chr34 C 0 I 752 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I a score=2460734.000000 s hg38.chr3_KI270934v1_alt 114012 243 + 163458 ttcttagactgactatatatcaggttctccacggccc-c--atggctaatggctgccatactggacggcaaacactc--aacatttccatcatcacagacggtcctactgga------------------cCGACTCCCAG-CAGCACAGGCCGCACAGATCACTGTCCACCTGCCGCCCACTCTCCCTCTCTGCTGAGTATATTTAGGGGCAGCAACAGGTCTAGCTtaaagacgtttcc-gagctgctggaagccaggcatgatga s panTro5.chr3 2584349 243 - 202621043 tccttagactgaccatatatcaggttctccacggccc-c--atggctaatggctgccatactggatggcaaacactc--aacatttccatcatcacagacggtcctactgga------------------cCGACTCCCAG-CAGCACAGGCCGCACAGATCACTGTCCACCCGCCGCCCACTCTCCCTCTCTGCTGAGTATATTTAGGGGCAGCAACAGGTccagcttaaagacgtttcc-gagctgctggaagccaggcatgatga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 171572 243 - 190779 tccttagactgaccatatatcaggttctccacggccc-c--atggctaatggctgccatactggatggcaaacactc--aacatttccatcatcacagacggtcctactgga------------------cCGACTCCCAG-CAGCACAGGCCGCACAGATCACTGTCCACCCGCTGCCCACTCTCCCTCTCTGCTGAGTATATTTAGGGGCAGCAACAGGTCCAGCTTAAAGACGTTTCC-GAGCTGCTGGAAGCCAGGCATGATGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 6566 243 + 880730 ttcttagactgaccatatatcaggttctccacggctg-c--atggctaatggctgccatactggacggcaaacactc--aacatttccatcatcacagacggtcctactgga------------------cCGACTCCCAG-CAGCACAGGCCGCACAGATCACTGTCCACTCGCCGCCCACTCTCCCTCTCTGCTGAGTATATTCAGGGGCAGCAACAGGTccagcttaaagatgtttcc-gagctgctggaagccaggcgtgatga i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2895734 245 - 123690457 ttcttagactgactatatatcaggttctccacagccc-cctgtggctaatggctgccatactggacggcagacactc--aacatttccatcatcacagacggtcctactgga------------------cCGACTCCCAG-CAGCACAGGCAGCACAGATCACTTTCCACCCGCCGCCCACTCTCCCTCTCTTCTGAGTATATTTAGGGGCAGCAACAGGTccagcttaaagacatttcc-gagctgctggaagccaggcgtgatga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179833338 246 - 180051392 ttctcagactgactatatatcaagttctccacagccc-tctgtggctaatggctgccatactggacggcaaacactcggaacatttccatcgtcacagacggtcccactgga------------------cCGACTCCCAG-CAGCACAGGCTGCACACATCAGTTTCCACCCACCGCCCACTCTCCCTCTCTTCTGAGTATATTCAGGGGCAGCCACAGGCCCAGCTTAAAGACAGTTCC-AAGCTGCTGGAAGTCAGGCATGAT-A i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1304723 247 + 181584905 ttcttagactgactatatatcaagttctccacagccc-tctgtggctaatggctgccatactggacggcaaacactcggaacatttccatcgtcacagacggtctcactgga------------------cCGACTCCCAG-CAGCACAGGCCGCACACATCAGTTTCCACCTGCTGCCCACTCTCCCTCTCTTCTGAGTATATTCAGGGGCAGCCACAGGCCCAGCTTAAAGACATTTCC-AAGCTGCTGGAAGTCAGGCATGATGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 58914 235 + 100774 ttctcagactgactatatatcaagttctccacagccc-tctgtggctaatggctgccatactggacggcaaacactcggaacatttccatcgtcacagacggtcccactgga------------------cCGACTCCCAG-CAGCACAGGCCGCA------------CACCTGCTGCCCACTCTCCCTCTCTTCTGAGTATATTCAGGGGCAGCCACAGGCCCAGCTTAAAGACATTTCC-AAGCTGCTGGAAGTCAGGCATGATGA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 17958 247 - 218577 ttctcagactgactatatatcaagttctccacagccc-tctgtggctaatggctgccatactggacggcaaacactcggaacatttccatcgtcacagacggtcctattgga------------------cCGACTCCCAG-CAGCACAGGCCGCACACATCAGTTTCCACCTGCCGCCCACTCGCCCTCTCTTCTGAGTATATTCAGGGGCAGCCACAGGCCCAGCTTAAAGACATTTCC-AAGCTGCTGGAAGCCAGGCATGATGA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1395416 247 + 91010382 ttcttagactgactatatatcaagttctccacagccc-tctgtggctaatggctgccacactggacggcaaacactcggaacatttccatcgtcacagacggtcctatggga------------------cCGACTCCCAG-CAGCACAGGCCGCACACATCAGTTTCCACCCACCGCCCACTCTCCCTCTCTTCTGAGTATATTCAGGGGCAGCCACAGGCCCGGCTTAAAGACATTTCC-AAGCTGCTGGAAGCCAGGCATGATGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 55550 247 + 74206 ttctcagactgactatatatcaagttctccacagccc-tctgtggctaatggctgccatactggacggcaaacactcggaacatttccatcgtcacagacagtcctattgga------------------cCGACTCCCAG-CAGCACAGGCCGCACACATCAGTTTCCACCCACCGCCCACTCTCCCTCTCTTCTGAGTATATTCAGGGGCAGCCACAGGCCCAGCTTAAAGACATTTCC-AAGCTGCTGGAAGCCAGGCATGATGA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 790006 247 - 1687011 ttctcagactgactatatatcaagttctccacagccc-tctgtggctaatggctgccatactggacggcaaacactcagaacatttccatcgtcacagacggtcctactgga------------------cCGACTCCCAG-CAGCACAGGCCGCACAGATCGGTTTCCACCCGCCGCCCACTCTCCCTCGCTTCTGAGTATATTCAGGGGCAGCAACAGGCCCAGCTTAAAGACATTTCC-AAGCTGCTGGAAGCCAGGCATGATGA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204155042 266 + 204313951 ttcttagactgactatataccaagttctccatagccctcccgtggctagtggttgccatactggacggcaaagacttggaacatttctgccatcacgggcagtcctattggacagtcctgATGTGGGAGGCTGACTCCCAG-AAGCACAGGCTGCAGAGATCAGTTTCCACCCACGGCCCACTCTCCCCCTCTTCTGAGTATATTTAGGGGCAGCAACAGGcccagcttaaagacatttcc-gagctgctggaagccaggtgtgatga i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16297384 265 + 16417988 ttcttagactgactatataccaagttctccacagccc-cccgtggctagtgctcgccacactggacggcaaagggctggaacatttctgtcatcacggccggtcctactagacagGCCTGATGTGGGAGGCTGACTCCCAG-CAGCACAGGCTgcagagatgagtttccacctgctgcccactctccccttcttctgagtatatttaggggcagcaagaggcccagcttaaagacatttcc-gagctgctggaagccaggtgtgatga i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 83972 265 - 306014 tttttagactaactatataccaagttctccatagccc-ccagtggctagtggttgccatactggacggcaaagacttggaacatttctgtcatcatggacggtcctactggacagtcctgATGTGGAAGGCTGACTCCCAG-CAGCACAGGCTGCAGAGATCAGTTTCCACCCGCTGCCCACTCTCCCCCTCTTCTGAGTATATTTAGGGGCAGCAACAGGcccagcttaaagacatttcc-aagctgctggaagccaggtgtgatga i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 127947 265 - 211231 ttcttagactgactatataccaagttctccatagccc-cccatggctagtggttgccatactggacggcaaagacttggaacacttctgtcatcacggatggtcctaccggacagTCCCGATGTGGGAGGCTGACTCCCAG-CAGCACAGGCCTCAGAGATCAGTTTCCACCTGCTGCCCACTCTCCCCCTCTTCTGAGTATATTTAGGGGCAGCAACAGGCTCAGCTTAAAGACATTTCT-GGGCTGCTGGAAGCCAGGTGTGATGA i aotNan1.NW_018494784v1 C 0 I 21 s otoGar3.GL873745 2115508 264 - 2165740 ttttaagactgatcacatttcaagtgatctgtagcca-tgtatgggtagtggtcatcatataggacaacaaagattcagaacatttctatcatcacagaaggtaccaatgaatagTCCTAGTCCAGAAGGCCAACTCTTGGACAGCACATGCTACATGGGTCAGCTTTCACTTAGTGCCCACTCTCCTCCT-TTCTGAATCTCCTCAGGGGCAGTAGCAGGcccag--taaagacacatccagagtcactggaagctaaccatggcca i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I e canFam3.chr34 11945320 752 + 42124431 I a score=447055.000000 s hg38.chr3_KI270934v1_alt 114255 73 + 163458 catgatcaatatc-tgggc--ctgagatgtaagcac--cagtgttgtgt--tgaactccaggaaacct-ctaagagaaagc s panTro5.chr3 2584592 73 - 202621043 catgatcaatatc-tgggc--ctgagatgtaagcac--cagtgttgtgt--tgaactccaggaaacct-ctaagagaaagc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 171815 73 - 190779 CATGATCAATATC-TGGGC--CTGAGATGTAAGCAC--CAGTGTTGTGT--TGAACTCCAGGAAACCT-CTAAGAGAAAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 6809 73 + 880730 catgatcaatatc-tgggc--ctgagatgtaagcac--cagtgttgtgt--tgaactccaggaaacct-ctaagagaaagc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2895979 71 - 123690457 catgatcaatatc-tgggc--ctgagatgtaagcac--cagtgttgtgt--tgaactccaggaaACCT-CT--GAGAAAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179833584 76 - 180051392 CACGATCAATATGATGGGACGCTGAGATGTAAGCGACGCAGTATTA-GT--TTAACCC--AGGAACCTGCGAAGAGCAAGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1304970 74 + 181584905 CACGATCAATATG-TGGGC--CTGAGATATAAGCAC--CAGTATTGTGT--TGAACTCCAGGAAACCTGCAAAGAGAAAGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59149 74 + 100774 CATGATCAATATG-TGGGC--CTGAGATGTAAGCAC--CAGTATTATGT--TGAACTCCAGGAAACCTGCGAAGAGAAAGC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 18205 74 - 218577 CATGATCAATATG-TGGGC--CTGAGATGTAAGCAC--CAGTATTATGT--TGAACTCCAGGAAACCTGCGAAGAGAAAGC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1395663 74 + 91010382 CATGATCAATATG-TGGGC--CTGAGATGTAAGCAC--CAGTATTATGT--TGAACTCCAGGAAACCTGCTAAGAGAAAGC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 55797 74 + 74206 CATGATCAATATG-TGGGC--CTGAGATGTAAGCAC--CAGTATTATGT--TGAACTCCAGGAAACCTGCGAAGAGAAAGC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 790253 74 - 1687011 CATGATCAGTATG-TGGGC--CTGAGATGTAAGCAG--CAGTATTGTGT--TGAACGCCAGGAAACCTGCGAAGAGGAAGC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204155308 42 + 204313951 catggtcactatc-t-ggc--ctgagatgtaagcac--cagtgttgtg--------------------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16297649 43 + 16417988 cacggtcagtatc-tgggc--ctgagatgtaagcac--cagtgttgtg--------------------------------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 84237 43 - 306014 catggtcaatatc-tgggc--ctgagatgtaagcac--cagtgttgtg--------------------------------- i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2115772 76 - 2165740 tgcgattgatttc-tgagc--aagagatgtaagcaa--gagcatcctgtTATGATATTCAGGAAACCTGCTAAGAGAAAGC i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 128212 21 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I e canFam3.chr34 11945320 752 + 42124431 I a score=1396784.000000 s hg38.chr3_KI270934v1_alt 114328 148 + 163458 t-gccctgctGGGGACGGAGCTTCTCCGGCA-GTCCTGCGGCTCCCTCTCCTCCACAC-TGTGACTCATCCAT-GACAGCCAGCGACGGT-CAGGGCACGGAGGTCATGCCCAA------GCACACACGAGTGAACCACAGAAGGCTGTCCTGGATGCT s panTro5.chr3 2584665 148 - 202621043 t-gccctgctGGGGACAGAGCTTCTCCGGCG-GTCCTGCGGCTCCCTCTCCTCCACGC-TGTGACTCATCCAT-GACAGCCAGCGACGGT-CAGGGCACGGCGGTCATGCCCAA------GCACACACGAGTGAACCACAGAAGGCTGTCCTGGATGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 171888 148 - 190779 T-GCCCTGCTGGGGACGGAGCTTCTGCGGCG-GTCCTGCGGCTCCCTCTCCTCCACGC-TGTGACTCATCCAT-GACAGCCAGCGACGGT-CAGGGCACGGCGGTCATGCCCAA------GCACACACGAGTGAACCACAGAATGCTGTCCTGGATGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 6882 148 + 880730 t-gccctgctGGGGACTGACCTTCTCCGGCG-GTCCTGCGGCTCCCTCTCCTCCACGC-TGTGACTCATCCAT-GACAGCCAGCGACGGT-CAGGGCATGGAGGTCATGCCCAA------GCACACACGAATGAACCACAGAAGGCTGTCCTGGATGCT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896050 148 - 123690457 T-GCCCTGCTGGGGACTGAGCTTCTACGGTG-GTCCTGTGGCTCCCTCTCCTCCACGC-TGTGACTCATCCAT-GACAGCCAGCAACGGT-CAGGGCACGGAGGTCACGCCCAA------GCACACACGAGTGAACCACAGAAGGCTGTCCTGGATGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179833660 145 - 180051392 TGGCCCTGCT-GGGCCTGAGCTCTTC--GGT-GCCCTGCTGCTCCCTCTCC-CCACGCATGTGACTCATCCCTAGACACCGTGCGACGGTCCCAGGCAC-GAGGTCACGACCAA------GCACACCACAGTGAAC--GGAGAGCTTGTCCTGGATGCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1305044 148 + 181584905 T-GCCCTGCTGGGGACTGAGCTTCTCCCGTG-GTCCTGCTGCTCCCTCTCCTCCACGC-TGTGACTCATCCAT-GACAGCCTGCAACGGT-CAGGGCACGGAGGTCACGCCCAA------GCACACACGAGTGAACCGGAGAAGGCTGTCCTGGATGCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59223 148 + 100774 T-GCCCTGCTGGGGACTGAGCTTCTCCAGTG-GTCCTGCTGCTCCCTCTCCTCCACGC-TGTGACTCATCCAT-GACAGCCTGCAACGGT-CAGGGCACGGAGGTCACGCCCAA------GCACACACGAGTGAACCGGAGAAGGCTGTCCTGGATGCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 18279 148 - 218577 T-ACCCTGCTGGGGACTGAGCTTCTCCGGCA-GTCCTGCTGCTCCCTCTCCTCCACGC-TGTGACTCATCCAT-GACAGCCTGCGACGGT-CAGGGCACAGAGGTCACGCCCAA------GCACACACGAGTGAACCAGAGAAGGCTGTCCTGGATGCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1395737 148 + 91010382 T-GCCCTGCTGGGGACTGAGCTTCTCCGGCA-GTCCTGCTGCTCCCTCTCCTCCACGC-TGTGACTCATCCAT-GACAGCCCGTGACGGT-CAGGGCACGGAGGTCACGCCCAA------GCACACACGAGTGAACCAGAGAAGGCTGTCCTGGATGCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 55871 148 + 74206 T-GCCCTGCTGCGGACTGAGCTTCTCCGGCA-GTCCTGCTGCTCCCTCTCCTCCACGC-TGTGACTCATCCAT-GACAGCCTGCGACGGT-CAGGGCACGGAGGTCACGCCCGA------GCACACACGAGTGAACCAGAGAAGGCTGTCCTGGATGCT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 790327 149 - 1687011 C-GCCCCGCTGGGGACTGAGCTTCTCCGGCAGGTCCTGCTGCTCCCTCTCCTCCTCGC-TGTGACTCATCCAC-GACAGCCAGCGACGGT-CAGGGCACGGAGGTCACGCCCAA------GCACACACGAGCGAACCAGAGAAGGCCGTCCTGGATGCC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204155350 147 + 204313951 t-gctctgctggggactgAGCTTCTCAGGC--GCCCTGCGGCTCCATCTCCTCCACAC-TGTGACTCATCCAC-GACAGCCAGTGATGGT-CAGAGCACAGAGGCCATGCCCAG------GCACATTCGAGTGAACCAGAGAAGGCTGTCCTGGATGCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16297692 147 + 16417988 c-gcCCTGCTGGGGACTGAGCTTCTCAGGC--GTCCTGCGGCTCCCTCTCCTCCACAC-TGTGACTCATCCAT-GGCAGCCAGCGATGGT-CAGAGCACGGAGGCCGCGCCCAG------GCACGTTCGAGTGAACCAGAGAAGGCTGTCCTGCATGCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 84280 153 - 306014 t-gcCCTGCTGGGGACTGAGCTTCTCAGGC--GTCCTGCGGCTCCCTCTCCTCCACAC-TGTGACTCATCCAC-GACAGCCGGCGATGGT-CAGAGCACGGAGGCCACGCCCAGGCACATGCACATGCGAGTGAACCAGAGAAGGCTGTCCTGGATGCT i cebCap1.NW_016108150v1 C 0 I 291 s aotNan1.NW_018494784v1 128233 147 - 211231 T-GCCCCGCTGGGGACTGAACTTCTCAGGC--GTCCTGCGGCTCCCTCTCCTCCACAC-TGTGACTCATCCAT-GACAGCCAGCGATGGT-CAGAGCACAGAGGCCACGCCCAG------GCACATGCGAGTGAACCAGAGAAGGTTGTCCTGGATGCT i aotNan1.NW_018494784v1 I 21 I 298 s otoGar3.GL873745 2115848 123 - 2165740 T-GCCCAGCAGAGGATTGTGCTGCTCTGAC--ATTCCACTGCTC---CTCCTTTAGGC-T-----------AC-AACA----------GT-CAGAGGGTGGAAGCCTGGCTTCA------GCACACAGGAGTGAACCAGAGCAGGCTGTCCCTGATGCC i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I e canFam3.chr34 11945320 752 + 42124431 I a score=5283.000000 s hg38.chr3_KI270934v1_alt 114476 2 + 163458 --AA s panTro5.chr3 2584813 2 - 202621043 --AA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172036 2 - 190779 --AA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7030 2 + 880730 --AA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896198 2 - 123690457 --AA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179833805 2 - 180051392 --AA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1305192 2 + 181584905 --AA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59371 2 + 100774 --AA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 18427 2 - 218577 --AA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1395885 2 + 91010382 --AA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 56019 2 + 74206 --GA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 790476 2 - 1687011 --AA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204155497 2 + 204313951 --GA i calJac3.chr2 C 0 I 268 s saiBol1.JH378155 16297839 2 + 16417988 --GA i saiBol1.JH378155 C 0 I 285 s otoGar3.GL873745 2115971 2 - 2165740 CT-- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 128380 298 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I e cebCap1.NW_016108150v1 84433 291 - 306014 I e canFam3.chr34 11945320 752 + 42124431 I a score=11972.000000 s hg38.chr3_KI270934v1_alt 114478 3 + 163458 GCA s panTro5.chr3 2584815 3 - 202621043 GCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172038 3 - 190779 GCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7032 3 + 880730 GCA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896200 3 - 123690457 GCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179833807 3 - 180051392 GCA i rheMac8.chr6 C 0 I 78 s macFas5.chr6 1305194 3 + 181584905 GCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59373 3 + 100774 GCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 18429 3 - 218577 GCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1395887 3 + 91010382 ACA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 56021 3 + 74206 GCA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 790478 1 - 1687011 G-- i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 2115973 3 - 2165740 GCG i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 128380 298 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I e saiBol1.JH378155 16297841 285 + 16417988 I e calJac3.chr2 204155499 268 + 204313951 I e cebCap1.NW_016108150v1 84433 291 - 306014 I e canFam3.chr34 11945320 752 + 42124431 I a score=202213.000000 s hg38.chr3_KI270934v1_alt 114481 44 + 163458 GTCACTAATTCTGCCCTGGCCTGCTGACCTTC-------TATGTGGAG---AAG s panTro5.chr3 2584818 44 - 202621043 GTCACTAATTCTGCCCTGGCCTGCTGACCTTC-------TATGTGGAG---AAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172041 44 - 190779 GTCACTAATTCTGCCCTGGCCTGCTGACCTTC-------TATGTGGAG---AAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7035 44 + 880730 GTCACTAATTCTGCCCTGGCCTGCTGACCTTC-------TATGTGGAG---AAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896203 44 - 123690457 GTCACTAATTCTGCCCTAGCCTGCTGACCTTC-------TCTGTGGAA---AAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1305197 41 + 181584905 GTCACTAATTCTGCCCTAGCCTGCTGACCTTC-------TATGTGGAA------ i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59376 41 + 100774 GTCACTAGTTCTGCCCTAGCCTGCTGACCTGC-------TATGTGGAA------ i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 18432 41 - 218577 GTCACTAATTCTGCCCTAGCCTGCTGACCTTC-------TATGTGGAA------ i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1395890 41 + 91010382 GTCACTAATTCTGCCCTAGCCTGCTGACCTTC-------TATGTGGAA------ i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 56024 44 + 74206 GTCACTAATTCTGCCCTAGCCTGCTGACCTTC-------TATGTGGAAAAG--- i manLeu1.NW_012101728v1 C 0 I 22 s colAng1.NW_012116910v1 790479 39 - 1687011 --CACTAACTCTGCCCTAGCCTGCTGACCTTC-------TGTGTGGAA------ i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 2115976 51 - 2165740 GTTGCTAATTCCGTCCTAGACTGCTGACCTTCAGCCTTTCATGTGGCA---AAG i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 128380 298 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I e saiBol1.JH378155 16297841 285 + 16417988 I e calJac3.chr2 204155499 268 + 204313951 I e cebCap1.NW_016108150v1 84433 291 - 306014 I e canFam3.chr34 11945320 752 + 42124431 I e rheMac8.chr6 179833810 78 - 180051392 I a score=18653.000000 s hg38.chr3_KI270934v1_alt 114525 7 + 163458 -----AAGTGCA--------------- s panTro5.chr3 2584862 7 - 202621043 -----AAGTGCA--------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172085 7 - 190779 -----AAGTGCA--------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7079 7 + 880730 -----AAGTACA--------------- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896247 7 - 123690457 -----AAGTGCA--------------- i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1305238 7 + 181584905 -----AAGTGCA--------------- i macFas5.chr6 C 0 I 18 s macNem1.NW_012013899v1 59417 7 + 100774 -----AAGTGCA--------------- i macNem1.NW_012013899v1 C 0 I 18 s cerAty1.NW_012004452v1 18473 7 - 218577 -----AAGTGCA--------------- i cerAty1.NW_012004452v1 C 0 I 18 s chlSab2.chr4 1395931 7 + 91010382 -----AAGTGCA--------------- i chlSab2.chr4 C 0 I 18 s colAng1.NW_012116910v1 790518 7 - 1687011 -----AAGTGCA--------------- i colAng1.NW_012116910v1 C 0 I 18 s otoGar3.GL873745 2116027 27 - 2165740 GACTTTGGTACTTTTATCTAACTCAGA i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 128380 298 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I e saiBol1.JH378155 16297841 285 + 16417988 I e calJac3.chr2 204155499 268 + 204313951 I e cebCap1.NW_016108150v1 84433 291 - 306014 I e canFam3.chr34 11945320 752 + 42124431 I e manLeu1.NW_012101728v1 56068 22 + 74206 I e rheMac8.chr6 179833810 78 - 180051392 I a score=25372.000000 s hg38.chr3_KI270934v1_alt 114532 5 + 163458 CTTCT s panTro5.chr3 2584869 5 - 202621043 CTTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172092 5 - 190779 CTTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7086 5 + 880730 CTTCT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896254 5 - 123690457 CTTCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1305263 5 + 181584905 CTCCT i macFas5.chr6 I 18 C 0 s macNem1.NW_012013899v1 59442 5 + 100774 CTCCT i macNem1.NW_012013899v1 I 18 C 0 s cerAty1.NW_012004452v1 18498 5 - 218577 CTCCT i cerAty1.NW_012004452v1 I 18 C 0 s chlSab2.chr4 1395956 5 + 91010382 CTCCT i chlSab2.chr4 I 18 C 0 s manLeu1.NW_012101728v1 56090 5 + 74206 CTCCT i manLeu1.NW_012101728v1 I 22 C 0 s colAng1.NW_012116910v1 790543 5 - 1687011 CTCCT i colAng1.NW_012116910v1 I 18 C 0 s otoGar3.GL873745 2116054 5 - 2165740 CTGCT i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 128380 298 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I e saiBol1.JH378155 16297841 285 + 16417988 I e calJac3.chr2 204155499 268 + 204313951 I e cebCap1.NW_016108150v1 84433 291 - 306014 I e canFam3.chr34 11945320 752 + 42124431 I e rheMac8.chr6 179833810 78 - 180051392 I a score=26881.000000 s hg38.chr3_KI270934v1_alt 114537 4 + 163458 GGTC s panTro5.chr3 2584874 4 - 202621043 GGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172097 4 - 190779 GGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7091 4 + 880730 GGTC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896259 4 - 123690457 GGTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1305268 4 + 181584905 GGTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59447 4 + 100774 GGTC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 18503 4 - 218577 GGTC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1395961 4 + 91010382 GGTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 56095 4 + 74206 GGTC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 790548 4 - 1687011 GGTC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204155767 4 + 204313951 gatt i calJac3.chr2 I 268 C 0 s saiBol1.JH378155 16298126 4 + 16417988 gatt i saiBol1.JH378155 I 285 C 0 s otoGar3.GL873745 2116059 4 - 2165740 GATT i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 128380 298 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I e cebCap1.NW_016108150v1 84433 291 - 306014 I e canFam3.chr34 11945320 752 + 42124431 I e rheMac8.chr6 179833810 78 - 180051392 I a score=33840.000000 s hg38.chr3_KI270934v1_alt 114541 3 + 163458 TCT s panTro5.chr3 2584878 3 - 202621043 TCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172101 3 - 190779 TCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7095 3 + 880730 TCT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896263 3 - 123690457 TCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1305272 3 + 181584905 TCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59451 3 + 100774 TCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 18507 3 - 218577 TCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1395965 3 + 91010382 TCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 56099 3 + 74206 TCT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 790552 3 - 1687011 TCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204155771 3 + 204313951 TCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16298130 3 + 16417988 TCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 84724 3 - 306014 TCT i cebCap1.NW_016108150v1 I 291 C 0 s aotNan1.NW_018494784v1 128678 3 - 211231 TCT i aotNan1.NW_018494784v1 I 298 C 0 s otoGar3.GL873745 2116063 3 - 2165740 TCT i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I e canFam3.chr34 11945320 752 + 42124431 I e rheMac8.chr6 179833810 78 - 180051392 I a score=440422.000000 s hg38.chr3_KI270934v1_alt 114544 46 + 163458 TTCATATT----CTTGATACA-GTGAGGAGTA--TGT-CCTACTGCTGTTTACC s panTro5.chr3 2584881 46 - 202621043 GTCATATT----CTTGATACA-GTGAGGAGTA--TGT-CCTACTGCTGTTCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172104 46 - 190779 GTCATATT----CTTGATACA-GTGAGGAGTA--TGT-CCTACTGCTGTTCACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7098 46 + 880730 TTCATATT----CTTGATACA-GTGAGGAGTA--TGT-CCTACTGCTGTTTACC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896266 45 - 123690457 TCCATATT----CTTGGTACA-GTGAGGAGCA--CAT-CCTGCTGCTGTTT-CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179833888 50 - 180051392 TTCATATT----CCTGATACGTGAGCGAAGTAGCCGTCCCTACTGCGTTTACCC i rheMac8.chr6 I 78 C 0 s macFas5.chr6 1305275 46 + 181584905 TTCATATT----CTTGATACA-GTGAGGAGTA--CGT-CCTACTGCTGTTTACC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59454 46 + 100774 TTCACATT----CTTGATACG-GTGAGGAGTA--CGT-CCTACTGCTGTTTACC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 18510 46 - 218577 TTCATATT----CTTGATATG-GTGAGGAGTA--CGT-CCTACTGCTGTTTACC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1395968 46 + 91010382 TTCATATT----CTTGATATG-GTGAGGAGTA--CGT-CCTACTGCTGTTTACC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 56102 46 + 74206 TTCATATT----CTTGATACG-GTGAGGAGTA--CGT-CCTACTGCTGTTTACC i manLeu1.NW_012101728v1 C 0 I 241 s colAng1.NW_012116910v1 790555 46 - 1687011 TTCATGTT----CTTGATACG-GGGAGGAGTA--CGT-CCTACTGCTGTTTACC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204155774 46 + 204313951 TTCATATT----CTTGACACA-GTAAGGAGTA--TGT-CCTACTGCCGTTTTCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16298133 46 + 16417988 TTCATATT----CTTGACACA-GTGAGGAGTA--TGT-CCTCCTGCCGTTTTCC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 84727 46 - 306014 TTCATATT----CTTGACACA-GTGAGGAGTA--TGC-CCTACTGCCGTTTTCC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 128681 46 - 211231 TTCATATT----CTTGACACA-GTGAGGAGTA--TGT-CCTACTGCCGTTTTCC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2116066 50 - 2165740 TTTGTATTCTTACTTGATACA-GGAAGGACTA--TGT-CCTACTGCTATTTACC i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I e canFam3.chr34 11945320 752 + 42124431 I a score=7862.000000 s hg38.chr3_KI270934v1_alt 114590 6 + 163458 TCCACA s panTro5.chr3 2584927 6 - 202621043 TCCaga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172150 6 - 190779 TCCaga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7144 6 + 880730 TCCaga i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896311 6 - 123690457 TCCaga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179833938 4 - 180051392 TCga-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1305321 4 + 181584905 TCga-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59500 4 + 100774 TCga-- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 18556 4 - 218577 TCga-- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1396014 4 + 91010382 TCGA-- i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 790601 4 - 1687011 TCga-- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204155820 6 + 204313951 TCCaga i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16298179 6 + 16417988 TCCGGA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 84773 6 - 306014 TCCAGA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 128727 6 - 211231 TCCaga i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2116116 6 - 2165740 TCCATA i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I e canFam3.chr34 11945320 752 + 42124431 I e manLeu1.NW_012101728v1 56148 241 + 74206 I a score=10424.000000 s hg38.chr3_KI270934v1_alt 114596 1 + 163458 T s panTro5.chr3 2584933 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172156 1 - 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7150 1 + 880730 t i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896317 1 - 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179833942 1 - 180051392 t i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1305325 1 + 181584905 t i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59504 1 + 100774 t i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 18560 1 - 218577 t i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1396018 1 + 91010382 T i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 56389 1 + 74206 t i manLeu1.NW_012101728v1 I 241 C 0 s colAng1.NW_012116910v1 790605 1 - 1687011 t i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204155826 1 + 204313951 t i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16298185 1 + 16417988 T i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 84779 1 - 306014 C i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 128733 1 - 211231 t i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2116122 1 - 2165740 T i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I e canFam3.chr34 11945320 752 + 42124431 I a score=3004448.000000 s hg38.chr3_KI270934v1_alt 114597 358 + 163458 ACTGGTGCAGCctcgtatgtttattgcagcactagtcacaatagcaaagtcatggaatcaacctaagtgcccatcaacggacgaccggataaagaaaatgtggtac----atatataccatgaaatactacttggccat-aaaaaaagaatgcaatcatgtcttctgcagccagacggatggaatgggaggtcactatcctaagtgag-----tcagaaggtcaagtgtcacacattctcccttggaagtgggagctgaacggtgagtacacatggacacacggagtggactaac----------agactgtgggctccaaaaagcgggaggggtggggatgagcaattacctgctgagtacaacacacacgacttgg s panTro5.chr3 2584934 370 - 202621043 actggtgcagcctcgtatgtttatagcagcactggtcacaatagcaaagtcatggaatcaacctaagtgcccatcaacggatgaccggataaagaaaatgtggtacatatatatataccatgaaacactactcagccataaaaaaaagaacgcaatcatgtcttctgcagccagacggatggaacgggaggtcactatcctaagtgaagtgactcagaaggtcaagtgtcacacattctcccttggaagtgggagctgaacggtgagtacacatggacacacggagtggactaacag--------agactgggggatccaaaaagcgggaggggtggggatgagcaattatctgctgagtacaacacacacgacttgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172157 363 - 190779 actggtgcagcctcgtatgtttatagcagcactggtcacaatagcaaagtcatggaatcaacctaagtgcccatcaacggacgaccggataaagaaaatgtggtac----atatataccatgaaatactacttgg-cat--aaaaaagaacgcaatcatgtcttctgcagccagacggatggaacgggaggtcactatcctaagtgaagtgactcagaaagtcaagtgtcacacattctcccttggaagtgggagctgaacggtgagtacacatggacacacggagtggactaacag--------agactgggggatccaaaaagcgggaggggtggggatgagcaattatctgctgagtacaacacacacgacttgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7151 365 + 880730 actggtgcagcctcgtatgtttatcgcagcactagtcacaacagcaaagtcatggaatcaacctaagtgcccatcaacggacgaccggataaagaaaatgtggtac----atatataccatgaaatactacttggccat-aaaaatagaacacaatcatgtcttctctagccagacggatggaacaggaggtcactatcctaagtgaagtaactcagaaggtcaagtgtcacacattctcccttggaagtgggagctgaacggtgagtacacatgcacacacggagtggactaacag--------agactgggggctccaaaaagcaggagaggtggggatgagcaattatctgctgagtacaacacacacgacttgg i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896318 366 - 123690457 actggtgcagcctcatatgtttattgcagcactagtcacaatagcaaagtcatggaatcaacctaagtgcccatcaacggacgaccggatgaagaaaatgtggtac----atatataccatgaaatactactcagccac-aaaaaaagaacgcaatcatgtcttctgcagccacacggatggaaccggaggtcactatcctaagtgaagtgactcagaaggtcaagtgtcactcactt-------gaagtgggcgctgaacggtgagtacacctggacacacggagtggactaacagactggaacagactgggggcttcaaaaagcgggaggggtagggatgagcaattacctgctgggtacaacacacacgacttgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179833943 355 - 180051392 actggtgcagcttcgtatgtttatcgcagcactagtcacaatagcaaagtcatggaatcaacctaagtgcccatcaacggatgaccggacaaagaaaatgtggtac----ataaacaccatgaaa---tactcagccat-aaaaaaataacgcaatcatgtcttctgcagccacacagatggaacag---gtcactctcctaagtgaagtgactc--aaggtcaagtgtca--cattcttacttggaagtggaaactgaacggtgagtacacgtggccacacagagtggactaacag--------agactgggggctccaaaaagcggaaggggtggggatgagcaattacctgctgggtacaacatacacgacttgg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1305326 341 + 181584905 actggtgcagcctcgtatgtttatcgcagcactagtcacaatagcaaagtcatggaatcaacctaagtgcccatcaatggatgaccggacaaagaaaatgtggtac----ataaacaccatgaaa---tactcagccat-acaaaaataacgcaatcatgtcttctgcagccatgtggatggaacag------------------gaggtcactcagaaggtcaagtgtca--cattctcactt-gaagtgggagctgaatggtgagtacacgtggccacacggagtggactaacag--------agactgggggctccaaaaagcgggaggggtggggatgagcaattacctgctgggtacaacatacatgacttgg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59505 355 + 100774 actggtgcagcctcgtatgtttatcgcagcactagtcacaatagcaaagtcatggaatcaacctaagtgcccatcaacggatgaccggacaaagaaaatgtggtac----ataaacaccatgaaa---tactcagccat-acaaaaataacgcaatcatgtcttctgcagccacacagatggaacag---gtcactctcctaagtgaagtgactc--aaggtcaagtgtca--cattcttacttggaagtggaaactgaacggtgagtacacgtggccacacagagtggactaacag--------agactgggggctccaaaaagcggaaggggtggggatgagcaattacctgctgggtacaacatacacgacttgg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 18561 358 - 218577 actggtgcagcctcgtatgtttaccgcagcactagtcacaacagcaaagtcatggaatcaacctaagtgcccatcagcggatgaccggacaaagaaaatgtggtac----ataaacaccatgaaa---tactcagccat-aaaaaaataacgcactcatgtcttctacagccacgtggatggaacaggaggtcactctcctaagtgaagtgactc--aaggtcaagtgtca--cattcttacttggaagtggaagctgaacggtgagtacacgtggccacacggagtggactaacag--------agactgggggctccaaaaagtgggaggggtggggatgagcaattacctgctgggtacaacatacacgacttgg i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1396019 348 + 91010382 ACTGGTGGAGCctcgtatgtttatcgcagcactagtcacaatagcaaagtcatggaatcaacctaagtgcccatcaacggatgaccggacaaagaaaatgtggtac----ataaacaccatgaaa---tactcagccat-aaaaaaataacgcaatcatgtcttctgcagccacgtggatggaacaggaggtcactatcct-----aagtgactcagaaggtcaagtgtca--cattcttacttggaagtggaagctgaatggtgagtacacgtggccacacggagtggactaacag--------agactgggggctccaaaaagcgggaggggtggggatg-------acctgctgggtacaacatacacgacttgg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 56390 357 + 74206 actggtgcagcctcgtatg-ttatcgcagcactagtcacaacagcaaagtcatggaatcaacctaagtgcccatcagcggatgaccggacaaagaaaatgtggtac----ataaacaccatgaaa---tactcagccat-aaaaaaataacgcactcatgtcttctgcagccacgtggatggaacaggaggtcactctcctaagtgaagtgactc--aaggtcaagtgtca--cattctcacttggaagtggaagctgaatggtgagtacacgtggccacacggagtggactaacag--------agactgggggctccaaaaagcgggaggggtggcgatgagcaattatctgctgggtacaacatacacaacttgg i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 790606 356 - 1687011 actggtgcagcctcgcatgtttatcgcagcactagtcacaatagcaaagtc-tggaatcaacctaagtgcccatcaat-gatgaccagacaaagaaaatgtggtac----ataaacaccgtgaaa---tactcagcctt-acaaaaataacgcaatcatgtcttctgcagccacgtggatggaacaggaggtcactatcctaagtgaagtgactc--aaggtcaagtgtca--catgctcacttggaagtgggagctgaatggtgagtacatgtggccacacggagtggactaacag--------agactgggggctccaaaaagcgagaggggtggggatgagcaattacctgctgggtacaacatacacgacttgg i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204155827 338 + 204313951 actggtgcagcctggtacgttcatcacagcaccaatcacaacagc----------aatccacctacgtgcccattaacagatgat---------------gggcac----atatgcaccgtggaatactactcagacat--aaaaaagaactagatcgtgtctttcccagccacctggatggaacaggaggtcattaccctaagtgaaataactctgaaggtcaactgttgcacattctgacttggaagtgggagctgaactgtgagtatacatggacatatgg-gtagactaatag--------agactcggggctccaaaaagcgggaggggtggggatgagcaattacctactgggtacaacatatacaacttgg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16298186 348 + 16417988 CCTGGTGCAGCctggtacgttcatcacagcactagtcacaacagcaaagtcatgaaatccacctaggtgcccattaacggatgac---------------aggcac----atatgcaccatggaatactactcagacat--aaaaaggaactagatcgtgtctttcacggccacccggatggaatgggagaccattatcctaagtgaaataactcagaaggtcaactgtcacacattctgacttggaagtgggagctgaacagtgagtacacatggacatacggagtagactaatag--------agactcagggctccaaaaagcaagaggggtggggatgagcaatta-ctactgggtacaacatacacaactcag i saiBol1.JH378155 C 0 I 304 s cebCap1.NW_016108150v1 84780 349 - 306014 ACTGGTGCAGCctggcacgctcatcacagcactactcacaacagcaaagtcatgacatccacctaggtgcccattaacagatgac---------------gggcac----atgtgcaccacggaatactactcggacat--aaaaaagaactagatcgtgtctttcacagccacctggatggaacgggaggccattatcctaagtgaagtagctcagaaggtcaactgtcacacattctgacttggaagtgggagctgaacagtgagcacacatggacatacggagcagactaatag--------agactcggggctccaaaaagcaagaggggtggggatgagcaattacctactgggtacaacatacacaacctgg i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 128734 349 - 211231 actggtgcagcctggtacgttcatcacagcactaatcacaacagcaaagtcacgggatccacctaggtgcccattaacggatgac---------------gggcac----atatgcaccatggactactactaagacat--aaaaaagaactagatcgtgtctttcacagccacctggatggaatgggaggccattatcctaagtgaaataactcagaaggtcaactgtcaaacattctgacttggaagtgggacctgaacagtgagtacacatggacatacggagtagactaatag--------agacttggggctccaaaaagcaagaggggtggggataagcaattacctactgggtacaacatacacaacttgg i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I e canFam3.chr34 11945320 752 + 42124431 I e otoGar3.GL873745 2116123 0 - 2165740 C a score=58535.000000 s hg38.chr3_KI270934v1_alt 114955 15 + 163458 gtgacaggtacatga s panTro5.chr3 2585304 15 - 202621043 gtgacgggtacatga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172520 15 - 190779 gtgacgggtacatga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7516 15 + 880730 gtgacgggtacatga i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896684 15 - 123690457 gtgatgggtacatga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179834298 9 - 180051392 gtg------acgtga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1305667 9 + 181584905 gtg------atgtga i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59860 9 + 100774 gcg------acgtga i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 18919 9 - 218577 gtg------acgtga i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1396367 9 + 91010382 gtg------acatga i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 56747 9 + 74206 gtg------acgtga i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 790962 15 - 1687011 gtgatgggtacatga i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204156165 15 + 204313951 gggatggggacacga i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 85129 15 - 306014 gtgatgggtacacga i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 129083 15 - 211231 gtgatgggtacatga i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I e saiBol1.JH378155 16298534 304 + 16417988 I e canFam3.chr34 11945320 752 + 42124431 I e otoGar3.GL873745 2116123 0 - 2165740 C a score=91897.000000 s hg38.chr3_KI270934v1_alt 114970 9 + 163458 aaagcccag s panTro5.chr3 2585319 9 - 202621043 aaagcccag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172535 9 - 190779 aaagcccag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7531 9 + 880730 aaatcccag i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896699 9 - 123690457 aaagcccag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179834307 9 - 180051392 aaagcccag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1305676 9 + 181584905 aaagcccag i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59869 9 + 100774 aaagcccag i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 18928 9 - 218577 aaagcccag i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1396376 9 + 91010382 aaagcccag i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 56756 9 + 74206 aaagcccag i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 790977 9 - 1687011 aaagctcag i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204156180 9 + 204313951 aaagcccag i calJac3.chr2 C 0 I 342 s saiBol1.JH378155 16298838 9 + 16417988 aaagcgcac i saiBol1.JH378155 I 304 C 0 s cebCap1.NW_016108150v1 85144 9 - 306014 aaagcccag i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 129098 9 - 211231 aaagcccag i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I e canFam3.chr34 11945320 752 + 42124431 I e otoGar3.GL873745 2116123 0 - 2165740 C a score=45840.000000 s hg38.chr3_KI270934v1_alt 114979 4 + 163458 actc s panTro5.chr3 2585328 4 - 202621043 actc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172544 4 - 190779 actc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7540 4 + 880730 actc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896708 4 - 123690457 actc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179834316 4 - 180051392 actc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1305685 4 + 181584905 actc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59878 4 + 100774 actc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 18937 4 - 218577 actc i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1396385 4 + 91010382 actc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 56765 4 + 74206 actc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 790986 4 - 1687011 actc i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204156531 4 + 204313951 actc i calJac3.chr2 I 342 C 0 s saiBol1.JH378155 16298847 4 + 16417988 actc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 85153 4 - 306014 actc i cebCap1.NW_016108150v1 C 0 I 404 s aotNan1.NW_018494784v1 129107 4 - 211231 actc i aotNan1.NW_018494784v1 C 0 I 330 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I e canFam3.chr34 11945320 752 + 42124431 I e otoGar3.GL873745 2116123 0 - 2165740 C a score=51229.000000 s hg38.chr3_KI270934v1_alt 114983 10 + 163458 caccacctcc s panTro5.chr3 2585332 10 - 202621043 caccacttcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172548 10 - 190779 caccacttcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7544 10 + 880730 caccacctcc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896712 10 - 123690457 caccacatca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179834320 10 - 180051392 caccacctca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1305689 10 + 181584905 caccacctca i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59882 10 + 100774 caccacctca i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 18941 10 - 218577 caccacctca i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1396389 10 + 91010382 caccacctca i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 56769 10 + 74206 caccacctca i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 790990 10 - 1687011 caccacctca i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204156535 5 + 204313951 cacca----- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16298851 5 + 16417988 cacca----- i saiBol1.JH378155 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e aotNan1.NW_018494784v1 129111 330 - 211231 I e dasNov3.JH577625 354479 4936 - 913073 I e cebCap1.NW_016108150v1 85157 404 - 306014 I e canFam3.chr34 11945320 752 + 42124431 I e otoGar3.GL873745 2116123 0 - 2165740 C a score=410477.000000 s hg38.chr3_KI270934v1_alt 114993 59 + 163458 cagt----acatccacacaaagctgcacctgcatccccctagatctgtttttaaaaaaacaaa s panTro5.chr3 2585342 59 - 202621043 cagt----acatccacacaaaactgcacctgcatccccctagatctgtttttaaaaaaacaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172558 59 - 190779 cagt----acatccacacaaaactgcacctgcatccccctagatctgtttttaaaaaaacaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7554 58 + 880730 cagt----acatccacacaaaactgcacctgcatccccctagatctcttttt-aaaaaacaaa i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896722 62 - 123690457 cagtaaaaacatccacacaaaactgcacctgcatccccctaaatctattttt-aaaaaacaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179834330 58 - 180051392 tggt----acatccacacaaa-ctgcacctgcatccccctaaatctattttttaaaaaataaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1305699 58 + 181584905 tggt----acatccacacaaa-ctgcacctgcatccccctaaatctatttttaaaaaaacaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59892 58 + 100774 tggt----acatccacacaaa-ctgcacctgcatccccctaaatctattttttaaaaaataaa i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 18951 58 - 218577 cggt----acatccacacaaa-ctgcacctgcatccccctaaatctatttttaaaaaaacaaa i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1396399 58 + 91010382 cggt----acatccacacaaa-ctgcacctgcatccccctaaatctatttttaaaaaaacaaa i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 56779 57 + 74206 cggt----acatccacacaaa-ctgcacctgcatccccc-aaatctatttttaaaaaaacaaa i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 791000 58 - 1687011 cggt----acatccacacaaa-ctgcacctgcatcccccaaaatctatttttaaaaaaacaaa i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204156540 57 + 204313951 cagt----acatccacacaaaactgcacctgta--cccctaaatctattaaaataaaaacaca i calJac3.chr2 C 0 I 10 s saiBol1.JH378155 16298856 44 + 16417988 cagc----acatccacacaaaaccgcacctgtatccccctaaatcGGT--------------- i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 129441 59 - 211231 cagc----acatccacacaaaactgcacctgtatccccctaaatctattaaaataaaaaCAAC i aotNan1.NW_018494784v1 I 330 I 2 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I e cebCap1.NW_016108150v1 85157 404 - 306014 I e canFam3.chr34 11945320 752 + 42124431 I e otoGar3.GL873745 2116123 0 - 2165740 C a score=10920.000000 s hg38.chr3_KI270934v1_alt 115052 1 + 163458 a s panTro5.chr3 2585401 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172617 1 - 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7612 1 + 880730 a i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896784 1 - 123690457 a i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179834388 1 - 180051392 a i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1305757 1 + 181584905 a i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59950 1 + 100774 a i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 19009 1 - 218577 a i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1396457 1 + 91010382 a i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 56836 1 + 74206 a i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 791058 1 - 1687011 a i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204156607 1 + 204313951 A i calJac3.chr2 I 10 C 0 s cebCap1.NW_016108150v1 85561 1 - 306014 A i cebCap1.NW_016108150v1 I 404 C 0 s aotNan1.NW_018494784v1 129502 1 - 211231 A i aotNan1.NW_018494784v1 I 2 C 0 s otoGar3.GL873745 2116123 1 - 2165740 A i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I e saiBol1.JH378155 16298900 0 + 16417988 C e canFam3.chr34 11945320 752 + 42124431 I a score=280166.000000 s hg38.chr3_KI270934v1_alt 115053 29 + 163458 CCAGTGCAGGGCCAGGTATGCAGCCA--GCC s panTro5.chr3 2585402 29 - 202621043 CCAGTGCAGGGCCAGGTATGCAGCTA--GCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172618 29 - 190779 CCAGTGCAGGGCCAGGTATGCAGCTA--GCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7613 29 + 880730 CCAGTGCAGGGCCAGGTATGCAGCCA--GCC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896785 29 - 123690457 CCAGTGCAGGGCCAGGTATGCAGCCC--GCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179834389 29 - 180051392 CCAGTGCAGGGCCAGGTATGCAGCCA--GCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1305758 29 + 181584905 CCAGTGCAGGGCCAGGTATGCAGCCA--GCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59951 29 + 100774 CCAGTGCAGGGCCAGGTATGCAGCCA--GCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 19010 29 - 218577 CCAGTGCAGGGCCAGGTATGCAGCCG--GCC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1396458 29 + 91010382 CCAGTGCAGGGCCAGGTATGCAGCCA--GCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 56837 29 + 74206 CCAGTGCAGGGCCAGGTATGCAGCCG--GCC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 791059 29 - 1687011 CCAGTGCAGGGCCAGGTATGCAGCCA--GCC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204156608 25 + 204313951 GCAGTGCAGGGCCAGGCACA----CA--GCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16298900 10 + 16417988 ---------AGCCAGT------------GCC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 85562 29 - 306014 CCAGTGCAGGGCCAGATGCGCAGCCA--GCC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 129503 29 - 211231 CCAGCgcagggccaggtgcgcagcca--gcc i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2116124 31 - 2165740 CCAGTACAGGGTCAGCCAGGCAGCCAGTGTC i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11946072 27 + 42124431 CCAGCATAAGGCTATGGACACA--CA--GCC i canFam3.chr34 I 752 C 0 e mm10.chr13 74327542 746 + 120421639 I e dasNov3.JH577625 354479 4936 - 913073 I a score=245069.000000 s hg38.chr3_KI270934v1_alt 115082 23 + 163458 TGCTCACTCCAGAGC-GAGTCCAG s panTro5.chr3 2585431 23 - 202621043 TGCTCACTCCAGAGC-GAGTCCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172647 23 - 190779 TGCTCACTCCAGAGC-GAGTCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7642 23 + 880730 TGCTCACTCCAGAGC-GAGTCCAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896814 23 - 123690457 TGCTCACTCCAGAGC-GAGACCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179834418 23 - 180051392 TGCTCACTCCAGAGC-GAGTCCAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1305787 23 + 181584905 TGCTCACTCCAGAGC-GAGTCCAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59980 23 + 100774 TGCTCACTCCAGAGC-GAGTCCAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 19039 23 - 218577 TGCTCACTCCAGAGC-GAGTCCAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1396487 23 + 91010382 TGCTCACTCCAGAGT-GAGTCCAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 56866 23 + 74206 TGCTCACTCCAGAGC-GAGTCCAG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 791088 23 - 1687011 TGCTCACTCCAGAGC-GAGTCCAG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204156633 22 + 204313951 TGTTTGCTCCAGAGT-GAG-CCAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16298910 23 + 16417988 CGTCTGCTGCAGCGT-GAGTCCAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 85591 23 - 306014 TGTTTGCTCCAGAGT-GAGTTCAG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 129532 19 - 211231 tgtttgctccagagt-----ccag i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2116155 17 - 2165740 TGTT-----CAGAGT--AGCCCAG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11946099 23 + 42124431 TGCACACTCCAGAGC-GTGTGCAG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 359415 24 - 913073 TGCTCCCTCCGGAGCAGAGCGCAG i dasNov3.JH577625 I 4936 C 0 e mm10.chr13 74327542 746 + 120421639 I a score=2366818.000000 s hg38.chr3_KI270934v1_alt 115105 185 + 163458 ---GCTCTTACCTTCTGCATGCTGAGTCGCAGTTCCGATGTTCTTATGCTTCTTCCATCAGCAAATCTCAATTTGTCAAGATTCGTGACAGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCTAA------AACAACA--------AC---AAA---AAGAGCTAGAATTTA----ACTTTTG---AAAAC---CGTTT------TAAAAAA s panTro5.chr3 2585454 191 - 202621043 ---GCTCTTACCTTCTGCATGCTGAGTCACAGTTCCGATGTTCTTATGCTTCTTCCATCAGCAAATCTCAATTTGTCAAGATTCGTGACAGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCTAAaacaacaacaaca--------ac---aaa---aaGAGCTAGAATTTA----ACTTTTG---AAAAC---CGTTT------TAAAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172670 188 - 190779 ---GCTCTTACCTTCTGCATGCTGAGTCACAGTTCCGATGTTCTTATGCTTCTTCCATCAGCAAATCTCAATTTGTCAAGATTCGTGACAGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCTAA---AACAACAACA--------AC---AAA---AAGAGCTAGAATTTA----ACTTTTG---AAAAC---CGTTT------TAAAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7665 183 + 880730 ---GCTCTTACCTCCTGCATGCTGAGTCGCAGTTCCGATGTTCTTATG---CCTCCATCAGCAAATCTCAATTTGTCAAGATTCATGACAGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCTAA------AACAACA--------AC---AAA---AAGAGCTAGAATTTA----ACTTTTG--AAAAAC---CGTTT------TAAAAAA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2896837 182 - 123690457 ---GCTCTTACCTTCTGCATACTGAGTCGCAGTTCCGATGTTCTTATG---CTTCCATCAGCAAATCTCAATTTGTCAAGATTCATGACAGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCTAA------AACATCA--------AC---AAA---AAAAGCTGGAATTTA----ACTTTTG---AAAAC---CGTTT------CAAAAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179834441 178 - 180051392 ---GCTCTTACCTTCTGCATGCTGAGTCGAAGTTCTGACGTTCTTATG---CTTCCGTCAGCAAATCTCAATTTGTCAAGATTCATGACAGATTCTTCTCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCTAA------AACAAA---------------AA---AAAAGTTAGAATTTA----ACTTTTC---AAAAC---TATTT------TAAAAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1305810 179 + 181584905 ---GCTCTTACCTTCTGCATGCAGAGTCGAAGTTCCGACGTTCTTACG---CTTCCGTCAGCAAATCTCAATTTGTCAAGATTCATGA-AGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGAATTTATCTCCTAA------AACAAAA-------------CAA---AAAAGCTAGAATTTA----ACTTTTC---AAAAC---CGTTC------TAAAAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 60003 178 + 100774 ---GTTCTTACCTTCTGCATGCTGAGTCGAAGTTCTGACGTTCTTATG---CTTCCGTCAGCAAATCTCAATTTGTCAAGATTCATGACAGATTCTTCTCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCTAA------AACAAA---------------AA---AAAAGTTAGAATTTA----ACTTTTC---AAAAC---TATTT------TAAAAAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 19062 177 - 218577 ---GCTCTTACCTTCTGCATGCTGAGTCGAAGTTCCGACGTTCTTATG---CTTCCGTCAGCAAATCTCAATTTGTCAAGATTCATGACAGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCTAA------AACAA----------------AA---AAAAGTTAGAATTTA----ACTTTTC---AAAAC---TATTT------TAAAAAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1396510 179 + 91010382 ---GCTCTTACCTTCTGCATGCTGAGTCGAAGTTCCGACGTTCTTATG---CTTCCGTCAGCAAATCTCAATTTGTCAAGATTCATGA-AGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGAATTTATCTCCTAA------AACAAAA-------------CAA---AAAAGCTAGAATTTA----ACTTTTC---AAAAC---CATTT------TAAAAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 56889 180 + 74206 ---GCTCTTACCTTCTGCATGCTGAGTCGAAGTTCCGACGTTCTTATG---CTTCCGTCAGCAAATCTCAATTTGTCAAGATTCATGACAGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCTAA------AACAAAA-------------CAA---AAAAGCTAGAATTTA----ACTTTTC---AAAAC---CGTTC------TAAAAAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 791111 182 - 1687011 ---GCTCTTACCTTCTGCATGCTGAGTCGAAGTTCCGATGTTCTTATG---CTTCCGTCAGCAAATCTCAATTTGTCAAGATTCATGA-AGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCTAA------AACAAAA-------------CAAAACAAAAGTTAGAATTTA----ACTTCTC---AAAAC---CGTTT------TAAAAAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204156655 186 + 204313951 ---GCTCTTACCTTCTGCATGCTGAGTCGTAGTTCCGATGTTCTTATG---CTTCCGTCAGCAAATCTCAATTTGTCAAGATTCATGACAGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCtaa------aaaaaaa--aaaa--tt---aaa---aaaaGCTAGAATTTA----ACTTTTG---AAAAC---CACTT------TAAAAAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16298933 190 + 16417988 ---GCTCTTACCTTCTGCATGCTGAGTCGCAGTTCCGACGTTCTTATG---CTTCCATCAGCAAATCTCAGCTTGTCAAGGTTCATGACAGACTCTTCCCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCTAA------AAAAAAATCAAAATTTT---TTA---AAAAGCTAGAATTTA----ACTTTTG---AAAAC---TACTT------TAAAAAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 85614 189 - 306014 ---GCTCTTACCTTCTGCATGCTGAGTCGCAGTTCTGATGTTCTTATG---CTTCCATCAGCAAATCTCAATTTGTCAAGATTCATGACAGACTCTTCCCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCTaa------aaaaaaa--aaaa--ttaaaaaa---aaaaGCTAGAATTTA----ACTTTTG---AAAAC---CACGT------TAAAAAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 129551 190 - 211231 ---gctcttaccttctgcatgctGAGTCGCAGTTCCGATGTTCTTATG---CTTCCATCAGCAAATCGCAATTTGTCAAGATTCATGACAGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCTAA------AAAAATAATAAAAATTT---TAA---AAAAGCTAGAATTTA----ACTTTTC---AAAAC---CACTT------TAAAAAA i aotNan1.NW_018494784v1 C 0 I 382 s otoGar3.GL873745 2116172 175 - 2165740 ---GCTCTTACCTTTTGCATGCTGAGTCGTAATTCCGATGTTCTGATG---CTTCCATCAGCAAATCTCAATTTGTCAAGATTCATGACAGATTCTTCTCCAGCATTTGATTTAATTGGGGGAACTTTATCTCCTTA------AAAAAAA--------------AA---AAAAGCTGGAATTCA----ACTGTTA---GAAAA---CA----------GAAAAA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74328288 182 + 120421639 ---GCTCCTACCTTCTGCATGTTTAGGCGTAGTTCTGATGTTCTTATA---CTTCCATCGGCAAATCTCAACTTGTCAAGATTCATAACCGATTCTTCTCCAGCATTTGCCTTAATTGAAGGAACTTTATCTCCTTA--------------------------AAA---GAAAGCCAGAATTTA----ACATATGGGGGAAAT---CACTTATGGGGGAAAAAA i mm10.chr13 I 746 C 0 s canFam3.chr34 11946122 176 + 42124431 ----GGCTTACCTTCTGCATGTTGAGTCGTAGTTCAGATGTTCTTACA---CTTCCATTGGCAAATCTCAGTTTGTCAAGATTCATGACAGACTCTTCCCCGGCATTTGGTTTAATCGGGGGAATTTTATCTCCTTA------AAAAACA--------CACAGACA---AAAAGTGAGAATTTATTGGAGTTTGG---AAAAC--------------------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 359439 182 - 913073 GTCATGCTCACCTTCTGCATGCTGAGGCGTAGCTCCGACGTTCTGATG---CTTCCTTCAGAAAACCTCAATTTGTCAAGATTCATGACAGATTCTTCTCCAGCATTTGCTTTAATTGGGGGAACTTTATCTCCTAA------TATA----------------AAA---AAAAGCTAG-ATTTA----ATTTTGA---AAAATAAACATTT------GAAAAAA i dasNov3.JH577625 C 0 C 0 a score=472727.000000 s hg38.chr3_KI270934v1_alt 115290 60 + 163458 ACAAATGGATTTAGTACTACACACAAA-AATGTAGCATAGCCGCTCAAGGAGCCTGGAAA-C s panTro5.chr3 2585645 60 - 202621043 CCAAATGGATTTAGTATGACACACAAA-AATGAAGCATAGCCGCTCAAGGAGCCTGGAAA-C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172858 60 - 190779 CCAAATGGATTTAGTATGACACACAAA-AATGAAGCATAGCCGCTCAAGGAGCCTGGAAA-C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7848 60 + 880730 CCAAATGGATTTAGTACGACACACAAA-AATGTAGCATAGCCGCTCAAGGAGCCTGGAAA-C i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2897019 60 - 123690457 CCAAATGGATTTAGAATGACATACAAA-TATGTAGCACAGCCGCTCAAGGAGCCTGGAAA-C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179834619 60 - 180051392 CCAAATGGATTTAGAATGATACAAAAA-TACATAGCACAGCCGCTCAAGGAGCTTGGAAA-C i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1305989 60 + 181584905 CCAAATGGATTTAGAATGACACAAAAA-TACGTAGCCCGGCCGCTCAAGGAGCTTGGAAA-C i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 60181 60 + 100774 CCAAATGGATTTAGAATGACACAAAAA-TACGTAGCACGGCCGCTCAAGGAGCTTGGAAA-C i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 19239 60 - 218577 CCAAATGGATTTAGAATGACACAAAAA-TACGTAGCACAGCCGCTCAAGGAGCTTGGAAA-C i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1396689 60 + 91010382 TCAAATGGATTTAGAATGACACAAAAA-TACGTAGCACGGCCGCTCAAGGAGCTTGGAAA-C i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 57069 60 + 74206 CCAAATGGATTTAGAATGACACAAAAA-TACGTAGCACAGCCGCTCAAGGAGCTTGGAAA-C i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 791293 60 - 1687011 CCAAATGGATTTAGAATGGCACAAAGG-TACGTAGCATAGCCGCTCAAGGAGCTTGGAAA-C i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204156841 59 + 204313951 CCTAATGGATTGAGAATGACACACAAA-TACGTGGCACAGCCACTCGAGGTGCCTGGACA-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16299123 59 + 16417988 CCAAATGGATTTAGAATGACACGCAAA-TACACAGCCCAGCCACTGAGGGTGCCTGGAAA-- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 85803 60 - 306014 CCAAATGGATTTCGAAAGACACACAAA-TACACAGCGCAGCCACTCAAGGTACCTGGAAAC- i cebCap1.NW_016108150v1 C 0 I 9 s otoGar3.GL873745 2116347 58 - 2165740 CCGGATGGATTTAGAATGACACACTAA-TGTGTATC--AGATATTCGAGGAGTCTGGAAA-A i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74328470 57 + 120421639 --AGAAAGATTGTGAATGCCACTCAAA-T-TATATAATAGCCATTCCAGGAGTTTGGAAA-G i mm10.chr13 C 0 C 0 s canFam3.chr34 11946298 15 + 42124431 ------------------ATACACATA------------------------ATCTGG----- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 359621 51 - 913073 ----ATGGAT-----GAGACACAAAAAATGTGTATCATA-CCATTGACAGAGTTTAGAAA-A i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 129741 382 - 211231 I a score=30520.000000 s hg38.chr3_KI270934v1_alt 115350 7 + 163458 GGTGTAA s panTro5.chr3 2585705 7 - 202621043 TGTGTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172918 7 - 190779 TGTGTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7908 7 + 880730 TGTGTAA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2897079 7 - 123690457 TGTGTAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179834679 7 - 180051392 TGCGAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1306049 7 + 181584905 TGTGAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 60241 7 + 100774 TGTGAAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 19299 7 - 218577 TGCGAAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1396749 7 + 91010382 TGCAAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 57129 7 + 74206 TGCGAAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 791353 7 - 1687011 TGCGAAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204156900 6 + 204313951 -GTGCAG i calJac3.chr2 C 0 I 222 s saiBol1.JH378155 16299182 6 + 16417988 -CCGCAG i saiBol1.JH378155 C 0 I 2 s otoGar3.GL873745 2116405 7 - 2165740 GGCAGCA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74328527 5 + 120421639 --CATAG i mm10.chr13 C 0 I 3 s dasNov3.JH577625 359672 7 - 913073 TGCAGAA i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 129741 382 - 211231 I e cebCap1.NW_016108150v1 85863 9 - 306014 I e canFam3.chr34 11946313 0 + 42124431 C a score=10750.000000 s hg38.chr3_KI270934v1_alt 115357 2 + 163458 GT s panTro5.chr3 2585712 2 - 202621043 GT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172925 2 - 190779 GT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7915 2 + 880730 GT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2897086 2 - 123690457 GT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179834686 2 - 180051392 GT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1306056 2 + 181584905 GT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 60248 2 + 100774 GT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 19306 2 - 218577 GT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1396756 2 + 91010382 GC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 57136 2 + 74206 GT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 791360 2 - 1687011 GT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204157128 2 + 204313951 GT i calJac3.chr2 I 222 C 0 s saiBol1.JH378155 16299190 2 + 16417988 AG i saiBol1.JH378155 I 2 C 0 s otoGar3.GL873745 2116412 2 - 2165740 GT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74328535 1 + 120421639 G- i mm10.chr13 I 3 C 0 s dasNov3.JH577625 359679 2 - 913073 GT i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 129741 382 - 211231 I e cebCap1.NW_016108150v1 85863 9 - 306014 I e canFam3.chr34 11946313 0 + 42124431 C a score=866825.000000 s hg38.chr3_KI270934v1_alt 115359 84 + 163458 CTCCTGAGCTAACAC--ACTGCC-AACCCACCCTACATCTGAG-GCCATCTGTTGAGTTGGGGCCAATTTTAAAGAACAGACATAAAA- s panTro5.chr3 2585714 84 - 202621043 CTCCTGAGCTAACAC--AGTGCC-AGCCCACCCTACATCTGAG-GTCATCTGTTGAGTTGGGGCCAATTTTAAAGAACAGACATAAAA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 172927 84 - 190779 CTCCTGAGCTAACAC--AGTGCC-AGCCCACCCTACATCTGAG-GCCATCTGTTGAGTTGGGGCCAATTTTAAAGAACAGACATAAAA- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 7917 84 + 880730 CTCCTGAGCTAACAC--ACTGCC-AGCCCACCCTACATCTGAG-GCCATCTGTTGAGTTGGGGCCAATTTTAAAGAACAGACATAAAA- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2897088 84 - 123690457 CTCCTGAGCTAACAC--ACTGCC-AGCCCACCCTACATCTGAG-GCCATCCGTTGAGTTGGGGCCAATTTTAAAGAACAGACATGAAA- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179834688 83 - 180051392 CTTCTCAGCTAACAC--ACTGCC-AGCCCACCCTACATCTGAG-GCCATCTGTTGAGTTGGGGCCAATTTTAAAGAACATACAT-AAA- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1306058 83 + 181584905 CCCCTCAGCTAACAC--ACTGCC-AGCCCACCCTACATCTGAG-GCCATCTGTTGAGTTGGGGCCAATTTTAAAGAACATACAT-AAA- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 60250 83 + 100774 CCCCTCAGCTAACAC--ACTGCC-AGCCCACCCTACATCTGAG-GCCATCTGTTGAGTTGGGGCCAATTTTAAAGAACATACAT-AAA- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 19308 83 - 218577 CTCCTCAGCTAACAC--ACGGCC-AGCCCACCCTACATCTGAG-GTCATCTGTTGAGTTGGGGCCAGTTTTAAAGAACATACAT-AAA- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1396758 83 + 91010382 CTCCTCAGCTAACAC--ACTGCC-AGCCCACCCTACATCTGAG-GCCATCTGTTGAGCTGGGGCCAGTTTTAAAGAACATACAT-AAA- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 57138 83 + 74206 CTTCTCAGCTAACAC--ACGGCC-AGCCCACCCTACATCTGAG-GCCATCTGTTGAGTTGGGGCCAGTTTTAAAGAACATACAT-AAA- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 791362 83 - 1687011 CTCCTCAGCTAACAC--ACTGCC-AGCCCACCCTACATCTGAG-GCCATCTGTTGAGTTGGGGCCAATTTTGAAGAACATACAT-AAA- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204157130 82 + 204313951 CTACTGAGCTAACAC--ACGGCC-AGCA-ACCCCACAACTGAG-GCCATCTACTGAGCTGGGGCCAATTTTAAAGAACATACAG-AAA- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16299192 83 + 16417988 CTCCTGAGCTGACAC--ATTACC-AGCCTACCCCACAACTGAG-GCCATCTATTGAGCTGGGGCCAATTTTAAAGAACACACAG-AAA- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 85872 83 - 306014 CTCCTGGGCTAACAC--ATTGCC-AGCCTACCCCACAACTGAG-GCCATCTACTGAGCTGGGGCCAATTTTAAAGAACATACAG-AAA- i cebCap1.NW_016108150v1 I 9 C 0 s aotNan1.NW_018494784v1 130123 81 - 211231 CTCCTGAGCT--CAC--ACTGCC-AGCCTACCCCACGACTGAG-GCCATCTATTGAGCTGGGGCCAATTGTAAAGAACATACAG-AAA- i aotNan1.NW_018494784v1 I 382 C 0 s otoGar3.GL873745 2116414 85 - 2165740 AACCCAAGCTAACAC--ATAGCCTGGCCCGCCCTTCTCCAAAGAACCAGCTACCGATTTGGGACCAATTTTAAAGATCATACAT-AAA- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74328536 79 + 120421639 AATCTGAACCAACACTGTTTGGC-A-CCAACCTAAGGAATGAG-AC-----ACTGACTCAGAGTCAGTCTTAAGACATATACAG-AGA- i mm10.chr13 C 0 I 23 s canFam3.chr34 11946313 56 + 42124431 -----------------ACTGCC---CTAACCCTAAA----GA-ACCACATACTGACTTGGGGCCA------AAGAGCAAACTT-AAA- i canFam3.chr34 C 0 I 1 s dasNov3.JH577625 359681 81 - 913073 AACCTGAGCTAATGC----TGCCTGGGCAGCCCTATAATTGAG-G--AATTGTTTATCAGGGGCCAATTCTACAGAATAAACAC-AGAA i dasNov3.JH577625 C 0 C 0 a score=583245.000000 s hg38.chr3_KI270934v1_alt 115443 54 + 163458 GGC-AAA-ACTGTTGGCACACAGTAGATATCCATTAAGTGATCTT-AGAGTGAATAA s panTro5.chr3 2585798 54 - 202621043 GGC-AAA-ACTGctggcacacagtagatatccattaagtgatctt-agagtgaataa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 173011 54 - 190779 GGC-AAA-ACTGctggcacacagtagatatccattaagtgatctt-agagtgaataa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 8001 55 + 880730 GGCAAAA-ACTGTtggcacacagtagatatccattaagtgatctt-agagtgaataa i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2897172 54 - 123690457 CGC-AAA-ACTGTTGGCACACAGTAGATATCCATTAAATAATCTT-AGAGTGAATAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179834771 54 - 180051392 GGC-AAA-ATTGTTGGCACACAGTAGATATCCATTAACTTATCTT-AGAGTGAATAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1306141 54 + 181584905 GGC-AAA-ATTGTTGGCACACAGTAGATATCCATTAACTTATCTT-AGAGTGAATAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 60333 54 + 100774 GGC-AAA-ATTGTTGGCACACAGTAGATATCCATTAACTTATCTT-AGAGTGAATAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 19391 54 - 218577 GGC-AAA-ATTGTTGGCACACAGTAGATATCCATTAACTTATCTT-AGAGTGAATAA i cerAty1.NW_012004452v1 C 0 I 1564 s chlSab2.chr4 1396841 54 + 91010382 GGC-AAA-ATTGTTGGCACACAGTAGATATCCATTAACTTATCTT-AGAGTGAATAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 57221 54 + 74206 GGC-AAA-ATTGTTGGCACACAGTAGATATCCATTAACTTATCTT-AGAGTGAATAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 791445 55 - 1687011 GGC-AAA-ATTGTTGGCACACAGTAGATATCCATTAACTTATCTTAAGAGTGAATAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204157212 55 + 204313951 GGC-AAACATTGTTGACACACAGTAGAAAGCCATTATGAGATCTT-GGAGTGAACAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16299275 54 + 16417988 GGC-AAA-ATTGTTAACACACAGTAGAAATCCATTAAGTGATCTT-AGAGTGAACAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 85955 54 - 306014 GGC-AAA-ATTGTTGACACACAGTAGAAATCCATTAAGTGATCTT-GGAGTGAACAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 130204 54 - 211231 GGC-AAA-ATTGTGGACACACAGTAGAAATCCATTAAGTGATCTT-GGAGTCAACAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2116499 55 - 2165740 GAAGAAA-AATGCTGTTATATAGTAGGTCTCCAATAAGTAATCTT-GGAATGAACAA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11946370 49 + 42124431 -AC-AAA-ATTTCTGGCAAAGAGTAGGTATCCAATATGAAATCTA-----TGAACAA i canFam3.chr34 I 1 C 0 s dasNov3.JH577625 359762 47 - 913073 -ac-aaa-act--tgttacacagtaggtgccca-taagtaatctc-tgaatgaa--- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74328615 23 + 120421639 I a score=314560.000000 s hg38.chr3_KI270934v1_alt 115497 33 + 163458 ACTAGAAATCATCTCTAAAATTAAAAAATTAAA- s panTro5.chr3 2585852 33 - 202621043 aCTAGAAATCATCTCTAAAATTAAAAAATTAAA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 173065 33 - 190779 aCTAGAAATCATCTCTAAAATTAAAAAATTAAA- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 8056 33 + 880730 aCTAGAAATCATCTCTAAAATTAAAAAATTAAA- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2897226 32 - 123690457 ACTAGAAATCATCTTTAAAATTAAAAAATT-AA- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179834825 32 - 180051392 ACTAGAAATCATCTCTAAAATTAAAAAATT-AA- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1306195 32 + 181584905 ACTAGAAATCATCTCTAAAATTAAAAAATT-AA- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 60387 32 + 100774 ACTAGAAATCATCTCTAAAATTAAAAAATT-AA- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1396895 32 + 91010382 ACTAGAAATCATCTCTAAAATTAAAAAATT-AA- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 57275 32 + 74206 ACTAGAAGTCATCTCTAaaattaaaaaatt-aa- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 791500 32 - 1687011 ACTAGAAATCATCTCTAAAATTAAAAAATT-AA- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204157267 32 + 204313951 GCTAGACATCACCTCTAAAATTAAAAAATT-AA- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16299329 32 + 16417988 ACTAGGTATCATCTCTAAAATTAAAAAATT-AA- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 86009 32 - 306014 ACTGGACATCATCCCTAAAATTAAAAAATT-AA- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 130258 32 - 211231 ACGAGACGTCATCTCTAAAATTAAAAAATT-AA- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2116554 32 - 2165740 ACTAGAAAGCACCCCCAAGATAAAAAACTT-AA- i otoGar3.GL873745 C 0 I 25 s canFam3.chr34 11946419 31 + 42124431 ATCAGAATCCATTCCTAAG-TTAAAAAATT-AG- i canFam3.chr34 C 0 I 231 s dasNov3.JH577625 359809 31 - 913073 --CAGCAACCACCTCTAATGTAGAAAAACC-CAA i dasNov3.JH577625 C 0 I 55 e mm10.chr13 74328615 23 + 120421639 I e cerAty1.NW_012004452v1 19445 1564 - 218577 I a score=1773692.000000 s hg38.chr3_KI270934v1_alt 115530 213 + 163458 ATGTAggccaggtgcagtggctcacgcctgtaatcccagcac-tttaggaggctga---ggtaggtgaagcacttgaggtcaggagttcaagagcagcctggccaacgtggcaaaacctcatttctac-taaaaacacaaaaattatct----------------------------------------------ggcatgagaactgctttaacccgaaaggtggaggttgcagtgagccgagatcgcgccactgcactccag s panTro5.chr3 2585885 213 - 202621043 ATGTAggccgggtgcggtggctcacgcctgtaatcccagcac-tttaggaggctga---ggtaggtgaagcacttgaggtcaggagttcaagagcagcctggccaacgtggcaaaacctcatttctac-taaaaacacaaaaattatct----------------------------------------------ggcatgagaactgcttcaacccgaaaggtggaggttgcggtgagccgagatcgtgccacggcactccag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 173098 213 - 190779 ATGTAggccgggtgcggtggctcacgcctgtaatcccagcac-tttaggaggctga---ggtaggtgaagcacttgaggtcaggagttcaagagcagcctggccaacgtggcaaaacctcatttctac-taaaaacacaaaaattatct----------------------------------------------ggcatgagaactgcttcaacccgaaaggtggaggttgcggtgagccgagatcgtgccacggcactccag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 8089 214 + 880730 ATGTAggccgggtgcggtggctcacgcctgtaatcccagcac-tttaggaggctga---ggtaggtgaagcacttgaggtcaggagttcaagagcagcctggccaacgtggcaaaacctcatttctacaaaaaaacacaaaaattatct----------------------------------------------ggcatgagaactgcttgaacccaaaaggtggaggttgcagtgagccgagatggcgccacggcactccag i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2897258 213 - 123690457 ATGTAggccgggggcggtggctcacgcctgtgatcccagcac-tgtaggaggctga---ggtaggtggagcactcgaggtcaggagttcaagagcagcctggccaacgtggtaaaacctcatttctac-taaaaacacaaaaattaATT----------------------------------------------ATcatgagaactgcttaaacctgaaagggggaggatgcagtgagccgagatcgtgccactgcactccag i nomLeu3.chr11 C 0 M 529 s rheMac8.chr6 179834857 259 - 180051392 ATGAAggccgggtgcggtggctctcgcctgtaatcctagcac-tttaggaggccga---gataggtggatcacttgaggttaggagttcaagtgcagcctggccaacatggcaaaacctcgtttctac-taaaaacacaaaaattatcggggtatggtggtgtgcgcctataatcccagctactcgggaggctgaggcatgagaactgcttgaacccgaaaggtagaggttgcagtgagccaagattgcgccactgcactccag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1306227 259 + 181584905 ATGAAggccaggtgcggtagctctcgcctgtaatcccagcac-tttaggaggccga---gataggtggatcacttgaggtcaggagttcaagagcagcctggccaacatggcaaaacctcatttctac-taaaaacacaaaaatgacctgggtatggtggcacgcgcctataatcccagctactcgggaggctgaggcacgagaactgcttgaacctgaaaggtgaaggttgcagtgagctgagatcgcgccactgcactccag i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 60419 259 + 100774 ATGAAggccgggtgcggtggctctcgcctgtaatcctagcac-tttaggaggccga---gataggtggatcacttgaggtcaggagttcaagtgcagcctggccaacgtggcaaaacctcgtttctac-taaaaacacaaaaattatcggggtatggtggtgtgcgcctataatcccagctactcgggaggctgaggcatgagaactgcttgaacccgaaaggtagaggttgcagtgagccgagattgcgccactgcactccag i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1396927 259 + 91010382 ATGAAggccaggtgcggtagctctcgcctgtaatcccagcac-tttaggaggccga---gataggtggatcacttgaggtcaggagttcaagagcagcctggccaacatggcaaaacctcatttctac-taaaaacacaaaaatgacctgggtatggtggcacgcgcctataatcccagctacttgggaggctgaggcacgagaactgcttgaacctgaaaggtgaaggttgcagtgagctgagatcgcgccattgcgctccag i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 57307 259 + 74206 atgaaggccgggtgcggtggctctcgcctgtaatcctagcac-tttaggaagccga---gataggtggatcacttgaggtcaggagttcaagtgcagcctggccaacgtggcaaaacctcgtttctac-taaaaacacaaaaattatcggggtatggtggcatgcgcctagaatcccagctactcgggaggctgaggcatgagaactgcttgaacccgaaaggtagaggttgcagtgagccgagatcgtgccactgcactccag i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 791532 259 - 1687011 ATGAAggccgggtgcgggagctctcacctgtaatcccagcac-tttaggaggccga---gataggtggatcacttgaggtcagaagttcaagtgcagcctggccaacgtggcaaaacctcatttctac-taaaaacacaaaaattacctgggtatggtggcacgcgcctataatcccagctactcgggaggctgaggcatgacaactgcttgaacctgagaggtgaaagttgcagtgagttgagatggcgccactgcactccag i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204157299 262 + 204313951 ATGTAGCCGgggcagggtgtgtcacacctgtaatcccagcac-ttcaggaggccgagatggtggatggatcacttgaggtcaggcatttgagaccaacctggccaacatggcaaaactttgtttctac-taaaaatacaaaaattagacaggtatggtggtgtgcacctgtaaacccagctacttgggagactgaggcatgagaactgcttgaacccggaaggtggaggttgcagtgagctgagactacaccactgcactccag i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16299361 256 + 16417988 ATGTAGCCGgggcagggtgggtcacacctgtaatcccagcacttttaggaggccga---ggtgggtggatcacttgaggtcaggcgttcgagaccaacttggccaacatggcaaaaccttgtttctac-taaaaatacaaaaatt----aggtgtggtggtatgcacctgtaaacccagctacttgggaggctgaggcatgagaactgcttgaacccagaaggtggaggttgcagtgagccgagactgcaccagtgcactccag i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 86041 251 - 306014 ATGTAGCCGgggcagggtgggtcacacctgtaatcccagcac-tttaggaggccga-------ggtggatcacttgaggtcaggcgttcgagaccaacctgtccaacatggcaaaaccttgtttctac-taaaaatacaaaaatt----aggtgtggtggtatgcgcctataaacccacctacttgggaggctgagacatgagaactgcttgaacctggaaggtggaggttgcagtgagccaagactgcaccactgcactccag i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 130290 255 - 211231 ATGAAGCTGgggcacggggggtcacacccgtaatcccagcac-tttgggaggccga---ggtgggtggatcacttgaggtcaggagttcgagaccaacctggccaacatggcaaaacctggtttctac-taaaaatacaaaaatt----aggtgtggtggtgtgcacctgtaaacccagctacttgggaggctggggcataagaactgcttgaacccggaaggtggaggttgcagtgagccgagactacaccactgcactccag i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74328615 23 + 120421639 I e dasNov3.JH577625 359840 55 - 913073 I e canFam3.chr34 11946450 231 + 42124431 I e otoGar3.GL873745 2116586 25 - 2165740 I e cerAty1.NW_012004452v1 19445 1564 - 218577 I a score=339522.000000 s hg38.chr3_KI270934v1_alt 115743 82 + 163458 cctgggcaacagagcgagaccctgtcttac-aaaaaaaaaaaaTTAAATGTATACAGATTTATATACATTAAGTGTATATAAA s panTro5.chr3 2586098 80 - 202621043 cctgggcaacagagtgagaccctgtcttac---aaaaaaaaaaTTAAATGTATACAAATTTATATACATTAAGTGTATATAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 173311 79 - 190779 cctgggcaacagagtgagaccctgtcttac----aaaaaaaaaTTAAATGTATACAAATTTATATACATTAAGTGTATATAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 8303 82 + 880730 cctgggcaacggagcgagaccctgtcttac-aaaaaaaaaaaaTTAAATGTATACAAATTTATATATATTAAATGTATATAAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179835116 78 - 180051392 tctgggca--agagcgagaccctgttttaa---aaaaaaaaaaTTAAATGTATACAAATTTATATACATTAAGTGTATATAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1306486 74 + 181584905 cctcg------gagtgagacgctgtcttta---aaaaaaaaaaaaaaaaGTATACAAATTTATACATATTAAGTGTATATAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 60678 77 + 100774 tctgggca--agagcgagaccctgt-ttta---aaaaaaaaaaTTAAATGTATACAAATTTATATACATTAAGTGTATATAAA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1397186 76 + 91010382 cctgcacaacagagtgagaccctgtcttta---aaaaaaaa----aaaaGTATACAAATTTATACATATTAAGTGTATATAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 57566 78 + 74206 tctgggca--agaacgagaccctgtttttt---aaaaaaaaaattaaatgtatacaaatttagatacattaaGTGTATATAAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 791791 78 - 1687011 cctgcacaacagagtgagaccttgtcttaa---aaaaaaaaaa--aaaaGTATACAAGTTTATACATATTAAGTGTATATAAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204157561 65 + 204313951 cctgggcaacagagtgagactctgtctttaaaaaaaaaaaaaaTTAAATGTATACAAATTTATAT------------------ i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16299617 65 + 16417988 cctgggcaacagagtgagactctgtctttaaaaaaaaaaaaaaTTAAATGTATACAAATTTATAT------------------ i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 86292 63 - 306014 cctgggcaacagagcgagactctgtcttt--gaaaaaaaaaaaTTAAATGTATACAAATTTATAT------------------ i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 130545 31 - 211231 cctgggcaaca----------------------------------aaATGTATACAAATTTATAT------------------ i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74328615 23 + 120421639 I e dasNov3.JH577625 359840 55 - 913073 I e canFam3.chr34 11946450 231 + 42124431 I e otoGar3.GL873745 2116586 25 - 2165740 I e cerAty1.NW_012004452v1 19445 1564 - 218577 I e nomLeu3.chr11 2897471 529 - 123690457 M a score=13904.000000 s hg38.chr3_KI270934v1_alt 115825 3 + 163458 TGT s panTro5.chr3 2586178 3 - 202621043 TGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 173390 3 - 190779 TGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 8385 3 + 880730 TGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179835194 3 - 180051392 CGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1306560 3 + 181584905 TGT i macFas5.chr6 C 0 I 26 s macNem1.NW_012013899v1 60755 3 + 100774 CGT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1397262 3 + 91010382 TGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 57644 3 + 74206 CGT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 791869 3 - 1687011 TGT i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 2116611 3 - 2165740 TAT i otoGar3.GL873745 I 25 C 0 s mm10.chr13 74328638 3 + 120421639 TGT i mm10.chr13 I 23 C 0 e aotNan1.NW_018494784v1 130576 0 - 211231 C e dasNov3.JH577625 359840 55 - 913073 I e saiBol1.JH378155 16299682 0 + 16417988 C e calJac3.chr2 204157626 0 + 204313951 C e cebCap1.NW_016108150v1 86355 0 - 306014 C e canFam3.chr34 11946450 231 + 42124431 I e cerAty1.NW_012004452v1 19445 1564 - 218577 I e nomLeu3.chr11 2897471 529 - 123690457 M a score=19387.000000 s hg38.chr3_KI270934v1_alt 115828 8 + 163458 CACTCCA-------------------C s panTro5.chr3 2586181 8 - 202621043 CACTCCA-------------------C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 173393 8 - 190779 CACTCCA-------------------C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 8388 8 + 880730 CACTCCA-------------------C i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179835197 8 - 180051392 CACTCCA-------------------C i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 60758 8 + 100774 CACTCCA-------------------C i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1397265 27 + 91010382 GTGTATATAACGGGAATAAGTGTATGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 57647 8 + 74206 CACTCCA-------------------C i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 791872 8 - 1687011 -------------------GTGTATAT i colAng1.NW_012116910v1 C 0 I 19 s calJac3.chr2 204157626 7 + 204313951 -ACTCCA-------------------C i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16299682 7 + 16417988 -ACTCCA-------------------C i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 86355 7 - 306014 -ACTCCA-------------------C i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 130576 7 - 211231 -ACTCCA-------------------C i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2116614 8 - 2165740 TACTCTA-------------------C i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74328641 8 + 120421639 TACTCCA-------------------G i mm10.chr13 C 0 C 0 e dasNov3.JH577625 359840 55 - 913073 I e canFam3.chr34 11946450 231 + 42124431 I e cerAty1.NW_012004452v1 19445 1564 - 218577 I e macFas5.chr6 1306563 26 + 181584905 I e nomLeu3.chr11 2897471 529 - 123690457 M a score=1122187.000000 s hg38.chr3_KI270934v1_alt 115836 151 + 163458 TAACGGGAAAAAATGA---CACCTTCCAGATGGTGGTCCCAA--GGGGCCGGCCGCCCCAC-TGTCCTT---CACATTAGGGGGAGGAAGGTGGCTGC----TGTGTGCTTGCAAGTCACCTGCTGATTTGGACTGTT--GTGTGCTCTCACCTATACTTCAAGAT s panTro5.chr3 2586189 151 - 202621043 TAAGGAGAAAAAAAGA---CACCTTCCAGATGGTGGTCCCAA--GGGGCCGGCCACCCCAC-TGTCCTT---CGCATTAGGGGGAGGAAGGTGGCTGC----TGTGTGCTTGAAAGCCACCTGCTGATTTGGACTGTT--GTGTGCTCTCACCTATACTTCAAGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 173401 151 - 190779 TAAGGAGAAAAAAAGA---CACCTTCCAGATGGTGGTCCCAA--GGGGCCGGCCACCCCAC-TGTCCTT---CGCATTAGGGGGAGGAAGGTGGCTGC----TGTGTGCTTGAAAGCCACCTGCTGATTTGGACTGTT--GTGTGCTCTCACCTATACTTCAAGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 8396 151 + 880730 TAAGGGGAAAAAAAGA---CACCTTCCAGATGGTGGTCCCAA--GGGGCCGGCCACCCCAC-TGTCCTT---CACATTAGGGGGAGGAAGGTGGCTGT----TGTGTGCTTGAAAGTCACCTGCTGATTTGGACTGTT--GTGTGCTCTCACCTATACTTCAAGAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179835205 151 - 180051392 TAAGGGAAAAAACAAA---CACCTTCCAGATGGTGGTCCTGA--GGGGCCGGCCACCCCAC-CGTCCTT---CGCATAAGGGGAAGGAAGGTGGCTGC----TGTGTGCTTGAAAGTCACCTGCTGATTTGGACTCTT--GTGTGCTCTCACCTACACTTCAAGAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1306589 154 + 181584905 TAAGGGGAAAAAAAAAAACCACCTTCCAGATGGTGGTCCCAA--GGGGCCGGCCACCCCAC-CGTCCTT---CGCATAAGGGGGAGGAAGGTGGTTGC----TGTGTGCTTGAAAGTCACCTGCTGATTTGGACTCTT--GTGTGCTCTCACCTACACTTCAAGAT i macFas5.chr6 I 26 C 0 s macNem1.NW_012013899v1 60766 151 + 100774 TAAGGGAAAAAACAAA---CACCTTCTAGATGGTGGTCCTGA--GGGGCCGGCCACCCCAC-CGTCCTT---CGCATAAGGGGAAGGAAGGTAGCTGC----TGTGTGCTTGAAAGTCACCTGCTGATTTGGACTCTT--GTGTGCTCTCACCTACACTTCAAAAT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1397292 151 + 91010382 AAGGGGAAAAAAAGGA---CACCTTCCAGATGGTGGTCCCAA--GGCGCTGGCCACCCCAC-CGTCCTT---CGCATCAGGGGAAGGAAGGTGGCTGC----TGTGTGCCTGAAAGTCACCTGCTGATTTGGACTCTT--GTGTGCTCTCACCTACAATTCAAGAT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 57655 151 + 74206 TAAGGGAAAAAAAAAA---CACCTTCCAGATGGTGGTCCCAA--GGGGCCGGCCACCCCAC-CGTCCTT---CGCATCAGAGGAAGGAAGGTGGCTGC----TGTGTGCTTGAAAGTCACTTGCTGATTTGGACTCTT--GTGTGCTCTCACCTACACTTCAAGAT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 791899 151 - 1687011 AAGGGGAAGAAAAGGA---CATCTTCCAGATGGTGGTCTCGA--GGAGCTGGCCACCCCAC-TGTCCTT---TGCATCAGGGGAAGGAAGGTGGCTGC----TGTGTGCTTGAAAGTCACCTGCTGATTTGGACTCTT--GTGTGCTCTCACCTACACTTCAATAT i colAng1.NW_012116910v1 I 19 C 0 s calJac3.chr2 204157633 149 + 204313951 TAAGGG--AAAAAAGA---CACC-TCCAGATGGTAATCCCGA--GGGGCTGGCCACCCCAC-CATCCTT---TGCATC-AGGGGAGGAAGGTGGCCGC----TGTGTGCTTGAAAGTCACTTGCTGATTCAAATTCTTGTGTGTGCTCTCACCTAGACTTCAAGAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16299689 150 + 16417988 TAAGGG-AAAAAAAGA---CAGC-TCCAGATGGTGGTCCTGA--CCGGCTGGCCACCTCAC-TGTCCTT---TGCATC-GGGGGAGGAAGGTGGCCGC----TGTGTGCCTGAAAGTCACTTGCTGATTCAAACTCTTGCGTGTGCTCTCACCTAGACTTCAAGAT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 86362 150 - 306014 TAAGGG-AAAAAGAGA---CACC-TCCAGATGGTGGTCCCGA--GGGGCTGGCCACCTCAC-CATCCTT---CGCATC-GGGGGAGGAAGGTGGCCGC----TGTGTGCTTGAAAGTCACTTGCTGATTCAAACTCTTGTGTGTGCTCTCACCTAGACTTCAAGAT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 130583 151 - 211231 TAAGGG-AAAAAAAGA---CACC-TCCACACGGTGGTCCCGA--GGGGCTGGCTACCCCAC-CGTCCTT---GGCATCAGGGGGAGGAAGGTGGCCGC----TGCGTGCTTGAAAGTCATTTGCTGATTCAAACTCTTGTGTGTGCTCTCACCTAGACTTCAAGAT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2116622 149 - 2165740 TAAGGA-GGAAAATGA---TACCATCCAGATAGCAGTGCTGA--GGAGCTGACCACCCCAA-AGTTCTCAGGTGTGCAGGGAGAAGGGAGGTGACAG-----TGTATA-TTGGTTGTTGTCTGCTGATTCTAACTC----GCATGCCCTTACGTAGTCCTGAAGAT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74328649 153 + 120421639 TAAGGA----AATTGT---TACCCTTAAGATAGTGGTCTCAATTTGAGATGTTAGCCTCACACGTTTTC---TGATGAAGGAATAAACAGGTAGCTATCCTATGTGTCTTGAAAAGCTGCCTGCTGGTCTTGACTCTT--AAGTGCTCTTACA-AAACCTCAAGAT i mm10.chr13 C 0 I 539 e dasNov3.JH577625 359840 55 - 913073 I e canFam3.chr34 11946450 231 + 42124431 I e cerAty1.NW_012004452v1 19445 1564 - 218577 I e nomLeu3.chr11 2897471 529 - 123690457 M a score=147399.000000 s hg38.chr3_KI270934v1_alt 115987 31 + 163458 TTGC-AAtttt-----ttttttttttttttgagatgg s panTro5.chr3 2586340 26 - 202621043 TTGC-AA----------tttttttttttttgagatgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 173552 27 - 190779 TTGCTAA----------ttttttttttttgtagatgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 8547 28 + 880730 TTGC-At---t-----ttttttttttttttgagatgg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179835356 27 - 180051392 TTGC-AA---------ttttttttttttttgagatgg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1306743 23 + 181584905 TTGC-AA-------------ttttttttttgagatgg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 60917 27 + 100774 TTGC-AA---------ttttttttttttttgagatgg i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1397443 25 + 91010382 TTGC-AA-----------ttttttttttttgagatgg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 57806 25 + 74206 TTGC-AA-----------ttttttttttttgagatgg i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 792050 30 - 1687011 TTGC-AA-ttt-----ttttttttttttttgagatgg i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204157782 24 + 204313951 TTGC-AA--C----------ttttttttttgagatgg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16299839 29 + 16417988 TTGC-AA--Ct-----ttttttttttttttgagatgg i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 86512 28 - 306014 TTGC-AA--C------ttttttttttttttgagatgg i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 130734 29 - 211231 TTGC-AA--Ct-----ttttttttttttttgagatgg i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2116771 34 - 2165740 CTGC-AG--CTATTACCtttctattttttagagctag i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e dasNov3.JH577625 359840 55 - 913073 I e canFam3.chr34 11946450 231 + 42124431 I e cerAty1.NW_012004452v1 19445 1564 - 218577 I e nomLeu3.chr11 2897471 529 - 123690457 M a score=557961.000000 s hg38.chr3_KI270934v1_alt 116018 63 + 163458 aattttgctctgtagcccaggctggagtgcagt----ggcaccatctcggctcactgcaacctccac s panTro5.chr3 2586366 63 - 202621043 aattttgctctgtagcccaggctggagtgcggt----ggcaccatctcggctcactgcaacctccac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 173579 63 - 190779 aattttgctctgtagcccaggctggagtgcggt----ggcaccatctcggctcactgcaacctccac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 8575 63 + 880730 aattctgctctgtagcccaggctggagtgcagt----ggcaccatctcggctcactgcaacctccac i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2898000 63 - 123690457 aattttgctctgtagcccaggctggagtgcagt----gacaccatcttggctcactgcaacctccac i nomLeu3.chr11 M 529 C 0 s rheMac8.chr6 179835383 63 - 180051392 aattttgctctgtagcccaagttggagtgcact----gacaccatctcggctcactgtaacctccac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1306766 63 + 181584905 aattttgctctgtagcccaggttggagtgcact----ggcaccatctcggctcactgcaacctccac i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 60944 63 + 100774 aattttgctctgtagcccaagttggagtgcact----gacaccatctcggctcactgtaacctccac i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1397468 63 + 91010382 aattttgctctgtagctcaggctagagtgcact----ggcaccatctcgactcactgcaacctccac i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 57831 63 + 74206 aattttgctctgtagcccaggttggagtgcact----ggcaccatctcggctcactgcaacctccac i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 792080 63 - 1687011 aattttgctctgtagcccaggctggagtgcact----ggtaccatctcggctcactgcaacctccgc i colAng1.NW_012116910v1 C 0 I 1 s calJac3.chr2 204157806 61 + 204313951 aattt--ctttgtagcccagtctggagtgcagc----ggcaccatctcggctccctgcaacctccac i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16299868 61 + 16417988 aattt--ctttgtagcccagtctggagtgcagt----ggcaccatctcggttcactgcaacctccac i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 86540 65 - 306014 cattt--ctttgtagcccagtctggagtgcagcggcaggcaccatcttggctcactgcagcctccac i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 130763 61 - 211231 aattt--ctttgcagcccagcctggagtgcagg----ggcaccatctcggctcattgcaacctccac i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2116805 63 - 2165740 ggtctctctctgttgtccagcctggagtgcagc----agcaacatcatagttcactgtacccttcaa i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e dasNov3.JH577625 359840 55 - 913073 I e canFam3.chr34 11946450 231 + 42124431 I e cerAty1.NW_012004452v1 19445 1564 - 218577 I a score=1250525.000000 s hg38.chr3_KI270934v1_alt 116081 138 + 163458 ctcc-tggttcaagcaatcctcctgcctcagactctggagtagatgggactaca--ggagtttgcaaccatacctggctaatttttgtattttcagtagagatggggtttcaccatgttggccaggctggtctcgaactcc s panTro5.chr3 2586429 138 - 202621043 ctcc-tggttcaagcaatcctcctgcctcagactctggagtagatgggactaca--ggagtatgcaaccatacctggctaatttttgtattttcagtagagatggggtttcaccatgttggccaggctggtctcgaactcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 173642 138 - 190779 ctcc-tggttcaagcaatcctcctgcctcagactctggagtagatgggactaca--ggagtatgcaaccatacctggctaatttttgtattttcagtagagatggggtttcaccatgttggccaggctggtctcgaactcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 8638 138 + 880730 ctcc-tggttcaagcaatcctcctgcctcagactctggagtagatgggactaca--ggagtatgcaaccatacctggctaatttttgtattttcagtagagatggggtttcaccatgttggccaggctggtctcgaactcc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2898063 138 - 123690457 ctcc-tggttcaggcaatcctcctgcctcagactccggagtagctgggactaca--ggagtacgccaccatacctggctaatttttgtattttcagtagagatggggtttcaccatgttggccaggctggtctcgaactcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179835446 138 - 180051392 ctcc-tcgttcaagcaatccttatgcctcagcctccagagtagctgggactaca--ggagtatgccaccatacctagctaatttttgtattttcagtagagatggggtttcaccatgttggccaggctggtctcaaactcc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1306829 138 + 181584905 ctcc-tggttcaagcaatccttctgcctcagtctccggagtagctgggactaca--ggagtatgccaccatacctggctaatttttgtattttcagtagagatggggtttcaccatgttgaccaggctggtctcaaactcc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 61007 138 + 100774 ctcc-tggttcaagcaatccttatgcctcagcctccagagtagctgggactaca--ggagtatgccaccatacctggctaatttttgtattttcagtagagatggggtttcaccatgttggccaggctggtctcaaactcc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 21009 138 - 218577 ctcc-tggttcaagcaatcctcctgcctcagtctccggagtagctgggactaca--ggagtatgccaccatacctggctaatttttgtattttcagtagaggtggggtttcaccatgttggccaggctggtctcaaactcc i cerAty1.NW_012004452v1 I 1564 C 0 s chlSab2.chr4 1397531 138 + 91010382 ctcc-tggttcaagcaatccttatgcctcagcctctggagtagctgggactaga--ggagtgtgccaccatacctggctaatttttgtattttcagtagagatggggtttcaccatgttgaccaggctggtctcaaactcg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 57894 138 + 74206 ctcc-tggttcaagcaatcctcctgcctcagtctccggagtagctgggactaca--ggagtatgccaccatacctggctaatttttgtattttcagtagaggtggggtttcaccatgttggccaggctggtctcaaactcc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 792144 140 - 1687011 ttcc-aggctccagcaatcctcccacctcagcctcccaagtagctgggactacaatggtgtgagccaccatgcccagctaatttttgtattttttgtagagacagggttttaccacctcgcccaagctggtcttgaactcc i colAng1.NW_012116910v1 I 1 C 0 s calJac3.chr2 204157867 138 + 204313951 ctcc-tagttcaagtgatcctcctgcctcagcctcccaagtagctgggactact--agagtgtttcaccatgtctggctaatttttctgtttttagtagagatggggcttccccatgttggccaggctggtctcaaactcc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16299929 129 + 16417988 ctcc-tagttcaagtgatcctcctgcctcagcctcccaagtagttg-----------gaatatttcaccacgcctggctaatttttctgtttttagtagagacggggcttcaccatgttggccaggctggtctcaaactcc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 86605 138 - 306014 ctcc-tagttcaagtgatcctcctgcctcaacctcccaagtagctgggactaca--gaagtgtttcaccatgcctggctaatttttctgtttttagtagagacggggcttcaccatgttggccagcctggtctcaaactcc i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 130824 138 - 211231 ctcc-tagttcaaatgatcctcctgcctcagcctcccaagaagctgggactaca--ggagtgtttcaccatgcctggctaatttttctgtttttagtagagatggggcttcaccatgttggccaggctggtctcaaactcc i aotNan1.NW_018494784v1 C 0 I 423 s otoGar3.GL873745 2116868 54 - 2165740 ctccagggctcaagtgattcttaggttgcatagttc------------actgca---------------------------------------------------------------------------accttcaactcc i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e dasNov3.JH577625 359840 55 - 913073 I e canFam3.chr34 11946450 231 + 42124431 I a score=30433.000000 s hg38.chr3_KI270934v1_alt 116219 3 + 163458 tga s panTro5.chr3 2586567 3 - 202621043 tga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 173780 3 - 190779 tga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 8776 3 + 880730 tga i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2898201 3 - 123690457 tga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179835584 3 - 180051392 tga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1306967 3 + 181584905 tga i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 61145 3 + 100774 tga i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 21147 3 - 218577 tga i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1397669 3 + 91010382 tga i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 58032 3 + 74206 tga i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 792284 3 - 1687011 tgg i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158005 3 + 204313951 tga i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16300058 3 + 16417988 tga i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 86743 3 - 306014 tga i cebCap1.NW_016108150v1 C 0 I 839 s otoGar3.GL873745 2116922 3 - 2165740 tgg i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e aotNan1.NW_018494784v1 130962 423 - 211231 I e dasNov3.JH577625 359840 55 - 913073 I e canFam3.chr34 11946450 231 + 42124431 I a score=40950.000000 s hg38.chr3_KI270934v1_alt 116222 5 + 163458 cctca s panTro5.chr3 2586570 5 - 202621043 cctca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 173783 5 - 190779 cctca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 8779 5 + 880730 cctca i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2898204 5 - 123690457 cctca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179835587 5 - 180051392 cctca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1306970 5 + 181584905 cctca i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 61148 5 + 100774 cctca i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 21150 5 - 218577 cctca i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1397672 5 + 91010382 cctca i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 58035 5 + 74206 cctca i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 792287 5 - 1687011 gctca i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158008 3 + 204313951 --tca i calJac3.chr2 C 0 I 377 s saiBol1.JH378155 16300061 3 + 16417988 --tca i saiBol1.JH378155 C 0 I 906 s otoGar3.GL873745 2116925 5 - 2165740 cctca i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e aotNan1.NW_018494784v1 130962 423 - 211231 I e dasNov3.JH577625 359840 55 - 913073 I e cebCap1.NW_016108150v1 86746 839 - 306014 I e canFam3.chr34 11946450 231 + 42124431 I a score=268987.000000 s hg38.chr3_KI270934v1_alt 116227 38 + 163458 ggtgagccacctgcctcagcctcccaaagtgctgggat s panTro5.chr3 2586575 38 - 202621043 ggtgagccacctgcctcagcctcccaaagtgctgggat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 173788 38 - 190779 ggtgagccacctgcctcagcctcccaaagtgctgggat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 8784 38 + 880730 ggtgagccacctgcctcagcctcccaaagtgccgggat i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2898209 38 - 123690457 ggtgagccacctgcctcggcctcacaaagtgctgggat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179835592 38 - 180051392 ggtgagccacctgtctcggcctcccaaagtgctgggat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1306975 38 + 181584905 ggtgatccacctgcctcggccttccaaagtgctgggat i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 61153 38 + 100774 ggtgagccacctgtctcggcctcccaaagtgctgggat i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 21155 38 - 218577 ggtgagccacctgtctcggctttccaaggtgctgggat i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1397677 38 + 91010382 ggtgagccacctgcctcggcctcccaaagtgctgggat i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 58040 38 + 74206 ggtgagtcacctgtctcggctttccaaggtgctgggat i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 792292 38 - 1687011 agcaatctgcctgcctcggcctcccaaagtggtgggat i colAng1.NW_012116910v1 C 0 I 331 s calJac3.chr2 155516 38 - 204313951 ggtgatgcacctgcatcagcttcccagagtgctgggat i calJac3.chr2 n 377 C 0 s otoGar3.GL873745 2116930 38 - 2165740 agagatcctcctacctcagcctcccagagtgctgggat i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e aotNan1.NW_018494784v1 130962 423 - 211231 I e dasNov3.JH577625 359840 55 - 913073 I e saiBol1.JH378155 16300064 906 + 16417988 I e cebCap1.NW_016108150v1 86746 839 - 306014 I e canFam3.chr34 11946450 231 + 42124431 I a score=278307.000000 s hg38.chr3_KI270934v1_alt 116265 52 + 163458 cacatgtgtgagctgctgcgcacggccAAGATTTGCAACTCTTGTGTTTCCA s panTro5.chr3 2586613 52 - 202621043 cacatgtgtgagctgctgcgcatggccAAGATTTGCAACTCTTGTGTTTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 173826 52 - 190779 cacatgtgtgagctgctgcacacggccAAGATTTGCAACTCTTATGTTTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 8822 52 + 880730 cacatgtgtgagccactgcgcacggccAAGATTTGCAACTCTTGTGTTTCCA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2898247 52 - 123690457 cacatgtgtgagccaccacgcacggccAAGATTTGCAACTCTTGTGTTTCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179835630 52 - 180051392 cacatgtgtgagccactgtgcacagccAAGATTTGCAACTCTTGTGTTTCTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1307013 52 + 181584905 cacaagtgtgagccactgtgcacagccGAGATTTGCAACTCTTGTGTTTCTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 61191 52 + 100774 cacatgtgtgagccactgtgcacagccAAGATTTGCAACTCTTGTGTTTCTA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 21193 52 - 218577 cacatgtgtgagccactgtgcacagccAAGATTTGCAACTCTTGTGTTTCTA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1397715 52 + 91010382 cacaagtgtgagccactgcgcacagccGAGATTTGCAACTCTTGTGTTTCCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 58078 52 + 74206 cacatgtgtgagccactgtgcacagccAAGATTTGTAACCCTTGTGTTTCTA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 155554 52 - 204313951 tacatgtataagccactgcacttggGCAAGATGTGCAACTCTTGTGTTTCTA i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 2116968 43 - 2165740 tgtaggtgTGAGTCATTGTGCCTATC---------TACCTCTCACTCTAAAA i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e aotNan1.NW_018494784v1 130962 423 - 211231 I e dasNov3.JH577625 359840 55 - 913073 I e saiBol1.JH378155 16300064 906 + 16417988 I e cebCap1.NW_016108150v1 86746 839 - 306014 I e canFam3.chr34 11946450 231 + 42124431 I e colAng1.NW_012116910v1 792330 331 - 1687011 I a score=131893.000000 s hg38.chr3_KI270934v1_alt 116317 25 + 163458 AGATGTCTTGAAAAAAGTTTTAAAG- s panTro5.chr3 2586665 24 - 202621043 AGATGTCTCGAAAAAAGTTTTAAA-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 173878 24 - 190779 AGATGTCTCGAAAAAAGTTTTAAA-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 8874 24 + 880730 AGATGTCTTGAAAAAAATTTTAAA-- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2898299 24 - 123690457 AGATGTCTTGAAAAAAATTGTAAA-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179835682 24 - 180051392 AGATGTCTTCAAAAAAATTTTAAA-- i rheMac8.chr6 C 0 I 1 s macFas5.chr6 1307065 24 + 181584905 AGATGTCTTGAAAAAAGTTTTAAA-- i macFas5.chr6 C 0 I 1 s macNem1.NW_012013899v1 61243 24 + 100774 AAATGTCTTCAAAAAAATTTTAAA-- i macNem1.NW_012013899v1 C 0 I 24 s cerAty1.NW_012004452v1 21245 24 - 218577 AGATGTCTTCAAAAAAGTTTTAAA-- i cerAty1.NW_012004452v1 C 0 I 1 s chlSab2.chr4 1397767 24 + 91010382 AGATGTCTTGAAAAAAGTTTTAAA-- i chlSab2.chr4 C 0 I 1 s manLeu1.NW_012101728v1 58130 24 + 74206 AGATGTCTTCAAAAAAGTTTTAAA-- i manLeu1.NW_012101728v1 C 0 I 1 s calJac3.chr2 155606 24 - 204313951 AGATGTCTTGAAAAAAGTTTTAAG-- i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 2117011 24 - 2165740 AGAGATTGTAAGGATTTTTTCAAG-- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11946681 23 + 42124431 AAATGTTTTGAAAAC--TTTTAAA-G i canFam3.chr34 I 231 C 0 e mm10.chr13 74328802 539 + 120421639 I e aotNan1.NW_018494784v1 130962 423 - 211231 I e dasNov3.JH577625 359840 55 - 913073 I e saiBol1.JH378155 16300064 906 + 16417988 I e cebCap1.NW_016108150v1 86746 839 - 306014 I e colAng1.NW_012116910v1 792330 331 - 1687011 I a score=35083.000000 s hg38.chr3_KI270934v1_alt 116342 30 + 163458 -GTTTTTTTTTTTTATAAAATTATATGTA--TT-- s panTro5.chr3 2586689 30 - 202621043 -GTTTTTTTTTTTTATAAAATTATATATA--TT-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 173902 30 - 190779 -GTTTTTTTTTTTTATAAAATTATATATA--TT-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 8898 28 + 880730 -G-TTTTTTCTTTTATAACATTATCTATA---T-- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2898323 27 - 123690457 -G---TTTTTTTTTATAACATTATATATA--TA-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179835707 23 - 180051392 ------TTTTTTTAATAACATTATATATA------ i rheMac8.chr6 I 1 C 0 s macFas5.chr6 1307090 25 + 181584905 ------TTTTTTTAATAACATTATATATATT---- i macFas5.chr6 I 1 C 0 s cerAty1.NW_012004452v1 21270 25 - 218577 ------TTTTTAAAATAACATTATATATATT---- i cerAty1.NW_012004452v1 I 1 C 0 s chlSab2.chr4 1397792 23 + 91010382 ------TTCTTTTTATAACATTATATATA------ i chlSab2.chr4 I 1 C 0 s manLeu1.NW_012101728v1 58155 23 + 74206 ------TTTTTAAAATAACATTATATATA------ i manLeu1.NW_012101728v1 I 1 C 0 s calJac3.chr2 155630 23 - 204313951 ------TTTTTTGTATAACTTTATGCATA------ i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 2117035 26 - 2165740 ---GTTGTTTTGTGATGACAATTTTTAAA------ i otoGar3.GL873745 C 0 I 7 s canFam3.chr34 11946704 31 + 42124431 ATGTTGTTTTTTTAATGACATGGTTTGAA----AT i canFam3.chr34 C 0 I 3 e mm10.chr13 74328802 539 + 120421639 I e aotNan1.NW_018494784v1 130962 423 - 211231 I e dasNov3.JH577625 359840 55 - 913073 I e macNem1.NW_012013899v1 61267 24 + 100774 I e saiBol1.JH378155 16300064 906 + 16417988 I e cebCap1.NW_016108150v1 86746 839 - 306014 I e colAng1.NW_012116910v1 792330 331 - 1687011 I a score=445041.000000 s hg38.chr3_KI270934v1_alt 116372 74 + 163458 TTTTCTTCAATAGGTAACACATGCAGGAGATAGGAGGTATGAAA---------TGCAGGAGTCAAACAGGCCCTGTCCCGCCT s panTro5.chr3 2586719 74 - 202621043 TTTTCTTCAATAGGTAACACATGCAGGAGATAGGAGGTATGAAA---------TGCAGGAGTCAAACAGGCCCTGCCCTGCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 173932 74 - 190779 TTTTCTTCAATAGGTAACACATGCAGGAGATAGGAGGTATGAAA---------TGCAGGAGTCAAACAGGCCCTGTCCCGCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 8926 74 + 880730 ATTTCTTCAATAGGTAACACATGCAGGAGATAGGAGGTATGAAA---------TGCAGGAGTCCAACAGGCCCTGCCCTGCCT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2898350 74 - 123690457 TTTTCTTCAATAGGTAACACATGCAGGAGGTAGGAGGTATGAAA---------TGCAGGAATCAAACAGGCCCTGCCCCGCCC i nomLeu3.chr11 C 0 I 226 s rheMac8.chr6 179835730 74 - 180051392 TTTTCTTCAACAGGTAATACATGCAGAAGGTAGGAGGTATGAAA---------TGCAGGAGTCAAACAAGCCCCGCCCCGCCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1307115 72 + 181584905 --TTCTTCAACAGATAATACATGCAGAAGGTAGGAGGTATGAAA---------TGCAGGAGTCAAACAAACCCCGCCCCACCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 61291 74 + 100774 TTTTCTTCAACAGATAATACATGCAGAAGGTAGGAGGTATGAAA---------TGCAGGAGTCAAACAGGCCCCGCCCCGCCC i macNem1.NW_012013899v1 I 24 C 0 s cerAty1.NW_012004452v1 21295 72 - 218577 --TTCTTCAACAGGTAATACATGCAGAAGGTAGGAGGTATGAAA---------TGCAGGAGTCAAACAGGCCCCGCCCCGCCC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1397815 74 + 91010382 TTTTCTTCAACAGGTAACACATGCAGAAGGTAGGAGGTATGAAA---------TGCAGGAGTCACACAGGCCCCGCCCCACCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 58178 74 + 74206 TTTTCTTCAACAGGTAATACATGCAGAAGGTAGGAGGTATGAAA---------TGCAGGAGTCAAACAGGCCCCGCCCCGCCC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 155653 72 - 204313951 TTTTCTTCAATAGTTAGTACATGCAGGAGGTAGGAGGTATGAAA---------TGCAGGGGACACACAGGTCATG--CTGCCC i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 2117068 72 - 2165740 --TTTTTCAACAGGTAATACACATGGGATATAGGAGGTAAGAAA---------TGCAGGAGACACATAGGTCTCTCACTCCCA i otoGar3.GL873745 I 7 I 1 s canFam3.chr34 11946738 75 + 42124431 TTTTCTTCCATAGGTAATATGGGCACAAGGTATGAAATGAGGAAACAAGGATTTGCAGG---CAAAGTAGGGTTGCTC----- i canFam3.chr34 I 3 I 5 s dasNov3.JH577625 359895 45 - 913073 TTTTCTTCAGCAGGTAA------CAGGAAGCA-GAAGCCTGCAA---------T------------TAGGCCT---------- i dasNov3.JH577625 I 55 C 0 e mm10.chr13 74328802 539 + 120421639 I e aotNan1.NW_018494784v1 130962 423 - 211231 I e saiBol1.JH378155 16300064 906 + 16417988 I e cebCap1.NW_016108150v1 86746 839 - 306014 I e colAng1.NW_012116910v1 792330 331 - 1687011 I a score=20774.000000 s hg38.chr3_KI270934v1_alt 116446 6 + 163458 ---ACCGCC s panTro5.chr3 2586793 6 - 202621043 ---ACCGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 174006 6 - 190779 ---ACCGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9000 6 + 880730 ---ACCGCC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2898650 6 - 123690457 ---ACCGCC i nomLeu3.chr11 I 226 C 0 s rheMac8.chr6 179835804 6 - 180051392 ---ACCGCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1307187 6 + 181584905 ---ACCGCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 61365 6 + 100774 ---ACCACC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 21367 6 - 218577 ---ACCGCC i cerAty1.NW_012004452v1 C 0 I 66 s chlSab2.chr4 1397889 6 + 91010382 ---ACCACC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 58252 6 + 74206 ---ACCGCC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 155725 6 - 204313951 ---ACTGCC i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 2117141 5 - 2165740 ---CCCAC- i otoGar3.GL873745 I 1 I 2 s canFam3.chr34 11946818 5 + 42124431 ---AGCTC- i canFam3.chr34 I 5 C 0 s dasNov3.JH577625 359940 6 - 913073 CTCACT--- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e aotNan1.NW_018494784v1 130962 423 - 211231 I e saiBol1.JH378155 16300064 906 + 16417988 I e cebCap1.NW_016108150v1 86746 839 - 306014 I e colAng1.NW_012116910v1 792330 331 - 1687011 I a score=437351.000000 s hg38.chr3_KI270934v1_alt 116452 92 + 163458 -TCTCCTCGGGACCAGGCTGTG-------------------GGTCTCTTGAC-GGTCTGCTCAAATGCTTCTAGGCTTGC-TGGTGTCTCTTTTCCTTTTGTTTATAACGCTTT s panTro5.chr3 2586799 92 - 202621043 -TCTCCACGGAACCTGGCTGTG-------------------GGTCTCTTGAG-GATCTGCTCAACTACTTCCAGGCTTGC-TGGTGTCTCTTTTCCTTTTGTTTATAACGCTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 174012 92 - 190779 -TCTCCACGGGACCAGGCTGTG-------------------GGTCTCTTGAG-GATCTGCTCAAATGCTTCCAGGCTTGC-TGGTGTCTCTTTTCCTTTTGTTTATAACGCTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9006 92 + 880730 -TCTCCACGGGACCAGGCTGTG-------------------GGTCTCTTGAG-GGTCTGCTCAAACGCTTCTAGGCTTGC-TGGTGTCTCTTTTCCTTTTGTTTATAATGCTTT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2898656 92 - 123690457 -TCTCCCTGGGCCCAGGCTGTG-------------------GGTCTCTTGAG-GGTCTGCTCAAATGTTTCTAGGCTCGC-TGGTGTTTCTTTTCCTTTTGTTTATAATGCTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179835810 92 - 180051392 -TCTCCAGGGGACCAGGGTGTG-------------------GGTCTCTTGAG-GGCCTGCTCAAATGCTTCTAGGATTGC-TGGTGTTTCTTTTCCTTTTGATTATAATGCTTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1307193 92 + 181584905 -TCTCCAGGGGACCAGGGTGTG-------------------GGTCTCTTGAG-GGCCTGCTCAAATGCTTCTAGGATTGC-TGGTGTTTCTTTTCCTTTTGATTATAATGCTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 61371 92 + 100774 -TCCCCAGGGGACCAGGGTGTG-------------------GGTCTCTTGAA-GGCCTGCTCAAATGCTTCTAGGATTGC-TGGTGTTTCTTTTCCTTTTGATTATAATGCTTT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1397895 88 + 91010382 -TCCCCAGGGGACCAGGGTGTG-------------------AGGCTCTTGAG-G----GCTCAAATGCTTCTAGGATTGC-TGGTGTTTCTTTTCCTTTTGATTATAACGCTTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 58258 92 + 74206 -TCCCCAGGGGACCAGGGTGTG-------------------GGTCTCTTGAG-GGCCTGCTCAAATGCTTCTGGGATTGC-TGGTGTTTCTTTTCCTTTTTATTATAATGCTTT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 155731 88 - 204313951 -TCTCCAAAGGACC--GCGAGG-------------------GGCCTCCTGAG-GGTCTGCTCACATGCTTCTAGGCTTGC-TTCTGTTTCTTTTCCTTTTGTTTAT--TGCTTT i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 2117148 81 - 2165740 -TCTTCAAGGAACCAGGGTGCT-------------------GCCCACTC---------ACCTGAACGCTTCTAGGAAGGC-TATTG---CTTTTCCTTTTGTTTATGATGTTCT i otoGar3.GL873745 I 2 C 0 s canFam3.chr34 11946823 93 + 42124431 -TCTACAAGGAGTGAGGGCACT-------------------GGTCTATCATGCAAACCACCCCAGCTCTTCCAGGCCAGC-TGTGGTTTCTTCTGCTTTTGTTTGTAATGTATT i canFam3.chr34 C 0 I 1 s dasNov3.JH577625 359946 110 - 913073 CCCTCTCGGGCACTGGGCTCTGCTCTCCAAAGGGGACCCACTGCTCCCTGTG-TGTCTGCTCAAGCACTTCTAGGCATGCTTACTGCTTCTTTTACTTTTAT---CAATTTTTT i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e aotNan1.NW_018494784v1 130962 423 - 211231 I e saiBol1.JH378155 16300064 906 + 16417988 I e cebCap1.NW_016108150v1 86746 839 - 306014 I e colAng1.NW_012116910v1 792330 331 - 1687011 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=88817.000000 s hg38.chr3_KI270934v1_alt 116544 12 + 163458 AAAAATTGATCA s panTro5.chr3 2586891 12 - 202621043 AAAAACGGATCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 174104 12 - 190779 AAAAATTGATCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9098 12 + 880730 AAAAATTGATCA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2898748 12 - 123690457 AAAAATGGATCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179835902 12 - 180051392 AAAAATTGATCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1307285 12 + 181584905 AAAAATTGATCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 61463 12 + 100774 AAAAATTGATCA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1397983 12 + 91010382 AAAAATTGATCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 58350 12 + 74206 AAAAATTGATCA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 792661 12 - 1687011 aaaaaTTGATCA i colAng1.NW_012116910v1 I 331 C 0 s calJac3.chr2 155819 12 - 204313951 AAAAATTGATCA i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 2117229 12 - 2165740 AAAAATTGACCA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11946917 12 + 42124431 GAAAAGTGATTA i canFam3.chr34 I 1 I 149 s dasNov3.JH577625 360056 12 - 913073 TAAAAGCTATGA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e aotNan1.NW_018494784v1 130962 423 - 211231 I e saiBol1.JH378155 16300064 906 + 16417988 I e cebCap1.NW_016108150v1 86746 839 - 306014 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=248038.000000 s hg38.chr3_KI270934v1_alt 116556 39 + 163458 TCCATTAAAATTGACTTTTTTCTTTCGGTGGACAGTTCT s panTro5.chr3 2586903 39 - 202621043 TTCATTAAAATTGACTTTTTTCTTTCGATGGACAGTTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 174116 39 - 190779 TTCATTAAAATTGACTTTTTTCTTTCGATGGACAGTTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9110 39 + 880730 TTCATTAAAATTGACTTTTTTCTTTCGGTGGACAGTTCT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2898760 39 - 123690457 TTCATTAAAATTGACTTTTTTCTTCTGGTGGACAGTTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179835914 39 - 180051392 TTCAGTAAAATTGACTTTTTTCTTTCAGTGGACCGTTGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1307297 39 + 181584905 TTCAGTAAAATTGACTTTTTTCTTTCAGTGGACCGCTCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 61475 39 + 100774 TTCAGTAAAATTGACTTTTTTCTTTCAGTGGACCGTTGT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1397995 39 + 91010382 TTCAGTAAAATTGACTTTTTTCTTTCAGTGGACAGTTCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 58362 39 + 74206 TTCAGTAAAATTGACTTTTTTCTTTCAGTGGACCATTCT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 792673 39 - 1687011 TTCAGTAAAATTGACTTTTTTCTTTCAGTGGACAGTTCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 155831 39 - 204313951 TTCAGTAAAATTGACTTTTTTCTTTTGGTGCACAGTTCT i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 2117241 37 - 2165740 TTCAGTAAAACTGACTTTTTTCATTTGGTGCAC--TTCT i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 360068 35 - 913073 CTCAGAAAA----CCCTTTTTCTTTTGGTGTACAGTTTT i dasNov3.JH577625 C 0 I 36 e mm10.chr13 74328802 539 + 120421639 I e aotNan1.NW_018494784v1 130962 423 - 211231 I e saiBol1.JH378155 16300064 906 + 16417988 I e cebCap1.NW_016108150v1 86746 839 - 306014 I e canFam3.chr34 11946929 149 + 42124431 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=375826.000000 s hg38.chr3_KI270934v1_alt 116595 79 + 163458 ACAGtttcttttttc----tttttttt-ttttgagacagtgtctcctccctctgttgcccaggctggagtgcagtggtgtgatc s panTro5.chr3 2586942 81 - 202621043 ACAGtttcttttttc--tttttttttt-ttttgagacagtgtctcctccctctgttgcccaggctggagtgcagtggtgtgacc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 174155 77 - 190779 ACAGtttattttttc------tttttt-ttttagtacagtgtctcctccctctgttgcccaggctggagtgcagtggtgtgacc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9149 83 + 880730 ACAGtttattttttctttttttttttt-ttttgagacagcgtctcctccctctgttgcccaggctggagtgcagtggtgtgatc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2898799 80 - 123690457 ACAAtttattttttc---ttttctttt-ttttgagacaatgtctcttccctctgttgcccaggctggagtggagtggtgtgatc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179835953 74 - 180051392 ACAAtttcttttttc--------tttt-ctttgagacagtgtctcctccctctgttgctcaggctgga-tgcagtggtgtgatc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1307336 76 + 181584905 ACAAtttcttttttc--------ttttattttgagacagcgtctcctccctctgttgctcaggctggagtgcagtggtatgatc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 61514 74 + 100774 ACAAtttcttttttc--------tttt-ctttgagacagtgtctcctccctctgttgctcaggctgga-tgcagtggtgtgatc i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1398034 75 + 91010382 ACAAtttcttttttc-------ttttt-ttttgagacagtgtctcctccctctgttgctcaggctgga-tgcagcggtgtgatc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 58401 74 + 74206 ACAAtttcttttttc--------tttt-ctttgagacagtgtctccttcctctgttgctcaggctgga-tgcagtggtatgatc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 792712 75 - 1687011 ACAAtttattttttc--------tttt-ttttgagacagtgtctcctccctctattgctcaggctggagtgcagtggtgtgatc i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 155870 75 - 204313951 ATAAtttctttgttt--------attt-ttttgagatagtgtctcctctacctgtcacccagcctggagtgcaatggtgtgatc i calJac3.chr2 C 0 n 0 s otoGar3.GL873745 2117278 65 - 2165740 ACAAtttttttgttt-------------ttttgagacagagtctcatgaa---gtcaccctcggtagagtgccatggtgtc--- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e aotNan1.NW_018494784v1 130962 423 - 211231 I e dasNov3.JH577625 360103 36 - 913073 I e saiBol1.JH378155 16300064 906 + 16417988 I e cebCap1.NW_016108150v1 86746 839 - 306014 I e canFam3.chr34 11946929 149 + 42124431 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=1184417.000000 s hg38.chr3_KI270934v1_alt 116674 233 + 163458 tcggctcacagcaacctccgccttctaggctccaacaatcctcccacctcagcctcccaagtagctgggacta--------------------------------------------cccaagtgtg-----------------------------agccaccatgc-----ccagct--------------------------aatttttgtat-------ttctggtagagacggggtttcaccaccttgcccaagctgg----------------------------tctcgaactcctgagctcaagcaatcggcctgccttggcctcccaaagtggtgggattataggtgtgag-ccactgcacccgg s panTro5.chr3 2587023 233 - 202621043 tcggctcactgcaacctccgccttctaggctccagcaatcctcccacctcagcctcccaagtagctgggacta--------------------------------------------cccaagtgtg-----------------------------agccaccatgc-----ccagct--------------------------aatttttgtat-------ttttggtagagacggggtttcaccaccttgcccaagctgg----------------------------tctcgaactcctgagctcaagcaatcggcctgccttggcctcccaaagtggtgggattataggtgtgag-ccactgcacccag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 174232 233 - 190779 tcggctcactgcaacctccgccttctaggctccagcaatcctcccacctcagcctcccaagtagctgggacta--------------------------------------------cccaagtgtg-----------------------------agccaccatgc-----ccagct--------------------------aatttttgtat-------ttttggtagagacggggtttcaccaccttgcccaagctgg----------------------------tctcgaactcctgagctcaagcaatcggcctgccttggcctcccaaagtggtgggattataggtgtgag-ccactgcacccag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9232 234 + 880730 tcggctcactgcaacctccgccttctaggctccagcaatcctcccatctcagcctcccaagcagctgggacta--------------------------------------------cccaagtgtg-----------------------------agccaccatgc-----ccagct--------------------------aatctttgtat-------ttttggtagagacggggtttcaccaccttgcccaagctgg----------------------------tctcgaactcctgagctcaagcaatcggcctgccttggcctcccaaagtggtgggattacaggtgtgagcccactgtacccaa i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2898879 233 - 123690457 tcggctcactgcaacctccgccttccaggctccagcaatcctcccacctcagcctcccaagtagctgggacta--------------------------------------------cccaagtgtg-----------------------------agccaccatac-----ccagct--------------------------aatttttgtat-------ttttggtagagacggggtttcaccaccttgcccaagctgg----------------------------tcttgaactcctcagctcaagcaatctgcctgcctcggcctcccaaagtggtgggattataggcgcgag-ccactgcacccag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179836027 233 - 180051392 tcagctcactgcaacctccgccttccaggctccagcaatcctcccacctcagcctcccaagtagctagggcta--------------------------------------------cactggtgtg-----------------------------agccaccatgc-----ccagct--------------------------aatttttgtat-------tttttgtagagacggggctttaccaccttgcccaagctgg----------------------------tcttgaactcctgagctcaagcaatctgcctgcctcggcctcccaaagtggtgggattataggcataag-ccactgcacccag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1307412 233 + 181584905 tcggctcactgcaacctccgccttcaaggctccagcaatcctcccacctcagcctcccaagtagctgggacta--------------------------------------------cactggtgtg-----------------------------agccaccatgc-----ccagct--------------------------aatttttgtat-------tttttgcagagacggggttttaccaccttgcccaagctgg----------------------------tcttgaactcctgagctcaagcaatctgcctgcctcggcctcccaaagtggtgggattataggcatgag-ccactgcgcccag i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 61588 233 + 100774 tcagctcactgcaacctccgccttccaggctccagcaatcctcccacctcagcctcccaagtagctagggcta--------------------------------------------cactggtgtg-----------------------------agccaccatgc-----ccagct--------------------------aatttttgtat-------tttttgtagagacggggctttaccaccttgcccaagctgg----------------------------tcttgaactcctgagctcaagcaatctgcctgcctcggcctcccaaagtggtgggattataggcataag-ccactgcacccag i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1398109 233 + 91010382 tcagctcactgcaacctccgccttccaggctccagcaatcctcccacctcagcctcccaagtagctgggacta--------------------------------------------cactggtgtg-----------------------------agccaccatgc-----ccagct--------------------------aatttttgtat-------tttttgcagagacggggctttaccaccttgcccaagctgg----------------------------tcttgaactcctgagctcaagcaatctgcctgcctcagcctcccaaagtggtgggattataggcatgag-ccactgcacccag i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 58475 233 + 74206 tcagctcactgcaacctccgccttccaggctccagcaatcctcccacctcagcctcccaagtagctgggacta--------------------------------------------cactggtgtg-----------------------------agccaccatgc-----ccagct--------------------------aatttttgtat-------tttttgtagagacggggctttaccaccttgtccaagctgg----------------------------tcttgaactcctgagctcaagcaatctgcctgcctcagcctcccaaagtggtgggattataggcatgag-ccactgcgcccag i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 792787 233 - 1687011 tcggctcactgcaacctccgccttccaggctccagcaatcctcccacctcagcctcccaagtagctgggacta--------------------------------------------caatggtgtg-----------------------------agccaccatgc-----ccagct--------------------------aatttttgtat-------tttttgtagaaacagggttttaccaccttgcccaagctgg----------------------------tcttgaactcctgggctcaagcaatctgcctgcctcggcctcccaaagtggtgggattataggcatgag-ccactgcacccag i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 2117343 371 - 2165740 acagctcacagcaacctcaaactcttgggcttaag-aattctcttgcctcagccttccaagtagctgggactataggcacccatcacaacacctggctatttttttgttgtagttgtcactgttgtttagcaggccggggcgggtacaaacccatcagccacagtgcatgggccagtgccctaatcactaagGAATGGGCGCTAAATCTTtttatttatttattttttttgagacagagacttactatgtcgccctgggtagagtgccatagcatcacagctcagagcaacctcaaactcttgagcttaagcaattatcctgcctcagcctcccaagtagctgggactataggcacctg-ccacaacacccag i otoGar3.GL873745 C 0 I 319 e mm10.chr13 74328802 539 + 120421639 I e aotNan1.NW_018494784v1 130962 423 - 211231 I e dasNov3.JH577625 360103 36 - 913073 I e saiBol1.JH378155 16300064 906 + 16417988 I e calJac3.chr2 155945 0 - 204313951 I e cebCap1.NW_016108150v1 86746 839 - 306014 I e canFam3.chr34 11946929 149 + 42124431 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=128219.000000 s hg38.chr3_KI270934v1_alt 116907 32 + 163458 ccTCAGTTCTACCGATTTTAACACATG----GATAG s panTro5.chr3 2587256 32 - 202621043 ccTCAGTTCTACCGATTTTAACACATG----GATAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 174465 32 - 190779 ccTCAGTTCTACCGATTTTAACACATG----GATAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9466 36 + 880730 ccTCAGTTCTACCAATTTTAACACACGGATAGATAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2899112 32 - 123690457 ccTCAGTTCTACCAATTTCAATGCATG----TATAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179836260 32 - 180051392 ccTCAATTCTACCAACTTTAACACATG----TATAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1307645 32 + 181584905 ccTCAGTTCTACCAACTTTAACACATG----TATAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 61821 32 + 100774 ccTCAGTTCTACCAACTTTAACACATG----TATAG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1398342 32 + 91010382 ccTCAGTTCTACCAACTTTAACACATG----TATAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 58708 32 + 74206 ccTCAGTTCTGCCAACTTTAACACATG----TATAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 793020 26 - 1687011 ccTCAGTTCTACC------AACACATG----TATAG i colAng1.NW_012116910v1 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e aotNan1.NW_018494784v1 130962 423 - 211231 I e dasNov3.JH577625 360103 36 - 913073 I e saiBol1.JH378155 16300064 906 + 16417988 I e calJac3.chr2 155945 0 - 204313951 I e cebCap1.NW_016108150v1 86746 839 - 306014 I e canFam3.chr34 11946929 149 + 42124431 I e otoGar3.GL873745 2117714 319 - 2165740 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=205821.000000 s hg38.chr3_KI270934v1_alt 116939 36 + 163458 atgcatgtaac-----cactttgggaggctgagacaggagg s panTro5.chr3 2587288 36 - 202621043 ATGCATGTAAC-----cactttgggaggctgagacaggagg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 174497 36 - 190779 ATGCATGTAAC-----cactttgggaggctgagacaggagg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9502 36 + 880730 ATGCATGTAAC-----cactttgggaggctgagacaggagg i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2899144 36 - 123690457 ATGCATGTAAC-----cactttgggaggctgagacaggagg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179836292 36 - 180051392 ATGCATGTAAC-----cactttgggaggctgagacaggagg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1307677 36 + 181584905 ATGCATATAAC-----cactttgggaggctgagacaggagg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 61853 36 + 100774 ATGCATGTAAC-----cactttgggaggctgagacaggagg i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1398374 36 + 91010382 ATGCATGTAAC-----cactttgggaggctgagacaggagg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 58740 36 + 74206 ATGCATGTAAC-----cactttgggaggctgagacaggagg i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 793046 36 - 1687011 ATGCATGTAAC-----cactttgggaggctgagacaggagg i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158388 41 + 204313951 atacatgtaatcccagcactctgggaagctgatgcaggtgc i calJac3.chr2 I 377 C 0 e mm10.chr13 74328802 539 + 120421639 I e aotNan1.NW_018494784v1 130962 423 - 211231 I e dasNov3.JH577625 360103 36 - 913073 I e saiBol1.JH378155 16300064 906 + 16417988 I e cebCap1.NW_016108150v1 86746 839 - 306014 I e canFam3.chr34 11946929 149 + 42124431 I e otoGar3.GL873745 2117714 319 - 2165740 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=410824.000000 s hg38.chr3_KI270934v1_alt 116975 68 + 163458 atcacttgaggtcaggagttcaagaccaccctgggcaacacagggagaccctgtccctagaatacatt s panTro5.chr3 2587324 67 - 202621043 atcacttgaggtcaggagttcaagaccatcctgggcaacacagggagaccctgt-cctagaatacatt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 174533 67 - 190779 atcacttgaggtcaggagttcaagaccatcctgggcaacacagggagaccctgt-cctagaatacatt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9538 67 + 880730 atcacttgagctcaggagttcaagaccatcctgggcaacaaagggagaccctgtccctagaa-acatt i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2899180 68 - 123690457 atcacttgaggtcaggagttcaagaccatcctgggaaacacagggagaccctgtccctagaaaacatt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179836328 68 - 180051392 atcacttgaggccaggagttcaagaccatcttgggcaacaaagggagaccctgtccctacaaaatatt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1307713 68 + 181584905 atcacttgacgccaggagttcaaaaccatcctaggcaacacagggagaccctgtccctatgaaacatt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 61889 68 + 100774 atcacttgaggccaggagttcaagaccatcttgggcaacaaagggagaccctgtccctacaaaatatt i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1398410 68 + 91010382 atcacttgaggccaggagttcaagaccatcttgggcaacacagggagactctgtccctacaaaatatt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 58776 68 + 74206 atcacttgaggccaggagttcaagaccatcctgggcaacaaagggagaccctgtccctacaaaatatt i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 793082 68 - 1687011 atcacttgaggccaggagttcaagaccatcctgggcaacagagggagaccctgtccctatgaaacatt i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158429 68 + 204313951 atcacctgaggccaagagttcaagaccatccggggtaacacagggagaccctgtccctacaaaaaatg i calJac3.chr2 C 0 C 0 s aotNan1.NW_018494784v1 131385 68 - 211231 atcacctgaggccaggagttcaagaccatccggggtaacatagggagaccccgtccctacaaaaaatg i aotNan1.NW_018494784v1 I 423 C 0 e mm10.chr13 74328802 539 + 120421639 I e dasNov3.JH577625 360103 36 - 913073 I e saiBol1.JH378155 16300064 906 + 16417988 I e cebCap1.NW_016108150v1 86746 839 - 306014 I e canFam3.chr34 11946929 149 + 42124431 I e otoGar3.GL873745 2117714 319 - 2165740 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=653054.000000 s hg38.chr3_KI270934v1_alt 117043 87 + 163458 tttaaaaattagccagatgtggtggcgtgcacctgatcgtaccactgcactcaagcctgggtgacagagggagactatgtctaaaaa s panTro5.chr3 2587391 87 - 202621043 tttaaaaattagccagatgtggtggcgtgcacctgatcgtaccactgcactcaagcctgggtgacagaggaagactatgtctaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 174600 87 - 190779 tttaaaaattagccagatgtggtggcgtgcacctgatcgtaccactgcactcaagcctgggtgacagagggagactatgtctaaaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9605 87 + 880730 tttaaaaattagccaggtgtggtggcgtgcacctgatcgtaccactgcactccagccttgacgacagaggaagactatgtctaaaaa i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2899248 87 - 123690457 tttaaaaattagccagatgtggtggcgtgcacctgatcgtaccactgcgctccagcctgggcgacagagggagactatgtctaaaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179836396 86 - 180051392 ttt-aaaattagccatgtgtggtggcgtgcacctAatcgtaccactgcactccagcctgggcgacagagggagactatctctaaaaa i rheMac8.chr6 C 0 I 3 s macFas5.chr6 1307781 87 + 181584905 tttaaaaattagccatgtgtggtggcgtgcacctgaccgtaccactgcactccagcctgggcgacagagggagactatctctaaaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 61957 86 + 100774 ttt-aaaattagccatgtgtggtggcgtgcacctAatcgtaccactgcactccagcctgggcgacagagggagactatctctaaaaa i macNem1.NW_012013899v1 C 0 I 3 s chlSab2.chr4 1398478 86 + 91010382 tttaaaaattagccatgtgtggtggcgtgcacctgatcgtaccactgcactccagcctgggcgacagagggagactatctctaaaa- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 58844 87 + 74206 ttttaaaattagccaggtatggtggcgtgcacctAatcgtaccactgcactccagcctgggcgacagagggagactatttctaaaaa i manLeu1.NW_012101728v1 C 0 I 26 s colAng1.NW_012116910v1 793150 87 - 1687011 ttaaaaaattagccatgtgtggtggtgtgcacctgaccataccactgcactccagcctgggcgacagagggagactagctctaaaaa i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158497 87 + 204313951 tttaaaaattagccaggtgtggtggcgtgcacctgATCATACCACTGCACTCCAGCCTGGGCGACAGAGGGAGACTATCTCTAAAAA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 87585 87 - 306014 tttaaaaattagccaggtgtggtggcatgtacctgatctcaccactgcactccagcctgggcggcagagggagactatctctaaaaa i cebCap1.NW_016108150v1 I 839 C 0 s aotNan1.NW_018494784v1 131453 87 - 211231 tttaaaaattagccaggtgtggtggcgtgcacctgatcctaccactgcactccagcctgggcgacagagggagactaactttaaaaa i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e dasNov3.JH577625 360103 36 - 913073 I e saiBol1.JH378155 16300064 906 + 16417988 I e canFam3.chr34 11946929 149 + 42124431 I e otoGar3.GL873745 2117714 319 - 2165740 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=30516.000000 s hg38.chr3_KI270934v1_alt 117130 10 + 163458 TACACATATA s panTro5.chr3 2587478 10 - 202621043 TACATATATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 174687 10 - 190779 TACATATATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9692 10 + 880730 tatatacata i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2899335 10 - 123690457 tatacatata i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179836485 10 - 180051392 TATATATGTA i rheMac8.chr6 I 3 C 0 s macFas5.chr6 1307868 2 + 181584905 --------TA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 62046 10 + 100774 TATATATGTA i macNem1.NW_012013899v1 I 3 C 0 s chlSab2.chr4 1398564 3 + 91010382 -------aTA i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 793237 8 - 1687011 --CATACATA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158584 10 + 204313951 CACATATCTA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 87672 10 - 306014 TACATATATG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 131540 10 - 211231 TACATATCTA i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e dasNov3.JH577625 360103 36 - 913073 I e saiBol1.JH378155 16300064 906 + 16417988 I e canFam3.chr34 11946929 149 + 42124431 I e otoGar3.GL873745 2117714 319 - 2165740 I e manLeu1.NW_012101728v1 58931 26 + 74206 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=-80540.000000 s hg38.chr3_KI270934v1_alt 117140 16 + 163458 TAT----------------------------------------------A--T--T------TT--TGG----------GGGGG----- s panTro5.chr3 2587488 18 - 202621043 TTT----------------------------------------------T--T--T------TTTCTGG----------GGGGG----- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 174697 18 - 190779 TTT----------------------------------------------T--T--T------TTTCTGG----------GGGGG----- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9702 58 + 880730 tatacatatatatatatatatatatat-tatatatatgtataatatatat--T--T------TTTTTGG-------------------- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2899345 52 - 123690457 tatatatatatatatatatatatatatatatatatatG-----------T--A--T------TTTTTGG----------GGGG------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179836495 15 - 180051392 TGT----------------------------------------------A--TTCT------TTTTTTG-------------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1307870 13 + 181584905 TGT----------------------------------------------A--T--T------TTTTGGG-------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 62056 15 + 100774 TGT----------------------------------------------A--TTCT------TTTTTTG-------------------- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1398567 18 + 91010382 TGT----------------------------------------------A--T--T------TTTTTggggggg--------------- i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 793245 18 - 1687011 TGT----------------------------------------------A--T--T------TTTTTGG-----GGGAG---------- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158594 16 + 204313951 TGT----------------------------------------------A--T--TTGT---TTTTTGA-------------------- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 87682 18 - 306014 TGT----------------------------------------------ATTT--TTTT---TTTTTGG-------------------- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 131550 15 - 211231 TGT----------------------------------------------G--G--TTG----TTTTTGG-------------------- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2118033 16 - 2165740 ----------------------------------------------------------TAAATGTTTAA---------------AAGAG i otoGar3.GL873745 I 319 C 0 e mm10.chr13 74328802 539 + 120421639 I e dasNov3.JH577625 360103 36 - 913073 I e saiBol1.JH378155 16300064 906 + 16417988 I e canFam3.chr34 11946929 149 + 42124431 I e manLeu1.NW_012101728v1 58931 26 + 74206 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=14608.000000 s hg38.chr3_KI270934v1_alt 117156 7 + 163458 TCGGGGG s panTro5.chr3 2587506 7 - 202621043 GCGGGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 174715 7 - 190779 GCGGGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9760 6 + 880730 -TGGGGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2899397 5 - 123690457 --GGGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179836510 5 - 180051392 --GGGGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1307883 5 + 181584905 --GGGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 62071 5 + 100774 --GGGGA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1398585 6 + 91010382 -tggggg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 58957 7 + 74206 TCGGGGA i manLeu1.NW_012101728v1 I 26 C 0 s calJac3.chr2 204158610 5 + 204313951 --AGGGA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 87700 5 - 306014 --AGGGA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 131565 5 - 211231 --AGGGA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2118049 7 - 2165740 TCATACT i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e dasNov3.JH577625 360103 36 - 913073 I e saiBol1.JH378155 16300064 906 + 16417988 I e canFam3.chr34 11946929 149 + 42124431 I e colAng1.NW_012116910v1 793263 0 - 1687011 C e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=408508.000000 s hg38.chr3_KI270934v1_alt 117163 52 + 163458 TTGGGGGAGAAGTAGGGATGCTACAAGCATTT-TTTCTTTCCTTTTCATTTTT s panTro5.chr3 2587513 52 - 202621043 TTGGGGGAGAAGTAGGGATGCTACAAGCATTT-TTTCTTTCCTTTTCATTTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 174722 52 - 190779 TTGGGGGAGAAGTAGGGATGCTACAAGCATTT-TTTCTTTCCTTTTCATTTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9766 52 + 880730 GTGGGGGAGAAGTAGTGATGCTACGAGCATTT-TTTCTTTCCTTTTCATTTTt i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2899402 52 - 123690457 GTGGGGGAGAAGTAGGGATGCTACAAGCATTT-TTTCTTTCCTTTTCATTTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179836515 52 - 180051392 GTGGGGGGGAAGTGGCGATGCTACAAGCATTT-TTTCTTTCCTTTTCATTTTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1307888 52 + 181584905 GTGGGGGAGAAGTAGTGATGCTACAAGCATTT-TTTCTTTCCTTTCCATTTTt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 62076 52 + 100774 GTGGGGGAGAAGTGGTGATGCTACAAGCATTT-TTTCTTTCCTTTTCATTTAA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1398591 52 + 91010382 gggggggAGAAGTAGTGATGCTACAAGCATTT-TTTCTTTCCTTTCCATTTTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 58964 52 + 74206 GTGGGGGAGAAGTGGTGATGCTACAAGCATTT-TTTCTTTCCTTTTCATTTTT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 793263 51 - 1687011 -TGGGGGAGAAGTGGTGATGCTACAAGTATTT-TTTCTTTCCTTTTCATTTTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158615 52 + 204313951 GTGGGGGAGAAGTAGTGATGCTACAAACCCTT-TTTCTTTCTTTTCCATTTTT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 87705 52 - 306014 GTTGGGGAGGAGTAGTGATGCTACAAACACCT-TTTCTTTCCTTTCCATTTTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 131570 52 - 211231 GTAGGGAAGAAGTAGCGATGCTACAAACACTT-TTTCTTTCCTTTCCATTTTA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2118056 48 - 2165740 TTGGGGGA-----AGGAGTGGTAGAAACATTTCTTTCCTCTCTTTTCTTTTTT i otoGar3.GL873745 C 0 I 270 s mm10.chr13 74329341 34 + 120421639 TTGGGGGAAAA------ATATTACAAATCTTT-T------------CATTTTT i mm10.chr13 I 539 C 0 e dasNov3.JH577625 360103 36 - 913073 I e saiBol1.JH378155 16300064 906 + 16417988 I e canFam3.chr34 11946929 149 + 42124431 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=80505.000000 s hg38.chr3_KI270934v1_alt 117215 8 + 163458 AAAAATTA s panTro5.chr3 2587565 8 - 202621043 AAAAATTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 174774 8 - 190779 AAAAATTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9818 8 + 880730 aaaaatta i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2899454 8 - 123690457 AAAAATTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179836567 8 - 180051392 AAAAATTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1307940 8 + 181584905 aaaaatta i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 62128 8 + 100774 AAAAATTA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1398643 8 + 91010382 AAAAATTA i chlSab2.chr4 C 0 I 323 s manLeu1.NW_012101728v1 59016 8 + 74206 AAAAATTA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 793314 8 - 1687011 AAAAATTA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158667 8 + 204313951 AAAAATTA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 87757 8 - 306014 AAAAATTA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 131622 8 - 211231 AAAAATTA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2118374 8 - 2165740 aaaaaTTA i otoGar3.GL873745 I 270 C 0 s mm10.chr13 74329375 7 + 120421639 -AAATTCA i mm10.chr13 C 0 C 0 e dasNov3.JH577625 360103 36 - 913073 I e saiBol1.JH378155 16300064 906 + 16417988 I e canFam3.chr34 11946929 149 + 42124431 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=25878.000000 s hg38.chr3_KI270934v1_alt 117223 7 + 163458 AAGCGTA--- s panTro5.chr3 2587573 7 - 202621043 AAGCATA--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 174782 7 - 190779 AAGCATA--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9826 7 + 880730 aagcata--- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2899462 4 - 123690457 AAGC------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179836575 7 - 180051392 AAGCACA--- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1307948 7 + 181584905 aagcata--- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 62136 7 + 100774 AAGCACA--- i macNem1.NW_012013899v1 C 0 C 0 s manLeu1.NW_012101728v1 59024 7 + 74206 AAGCACA--- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 793322 7 - 1687011 AAGCCTA--- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158675 10 + 204313951 AAGCATAATT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 87765 10 - 306014 AAGCATAATT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 131630 10 - 211231 AAGCATAATT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2118382 10 - 2165740 AAGCATAATT i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74329382 0 + 120421639 C e dasNov3.JH577625 360103 36 - 913073 I e saiBol1.JH378155 16300064 906 + 16417988 I e canFam3.chr34 11946929 149 + 42124431 I e chlSab2.chr4 1398651 323 + 91010382 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=489308.000000 s hg38.chr3_KI270934v1_alt 117230 103 + 163458 AAGATACAGT----AAAATAAACT-------------CATCATTTTTAATGTA-GGTTTTTCAAACTTTGACACACACAGAGCTGTGTCTGTAAGCCTCAGCACAAT-CAGGAAAcagc------ctc s panTro5.chr3 2587580 103 - 202621043 AAGATACAGT----AAAATAAACT-------------CATCATTTTTAATGTA-GGTTTTTCAAATTTTGACACACACAGAGCTGTGTCTGTAAGTCTCAGCACAAT-CAGGAAAcagc------ctc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 174789 103 - 190779 AAGATACAGT----AAAATAAACT-------------CATCATTTTTAATGTA-GGTTTTTCAAATTTTGACACACACAGAGCTGTGTCTGTAAGTCTCAGCACAAT-CAGGAAAcagc------ctc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9833 103 + 880730 aagatacagt----aaaataaaCT-------------CATCATTTTTAATGTA-GGTTTTTCAAATTTTGACACACACAGAGCTGTGTCTGTAAGTCTCAGCACAAT-CAGGAAAcagc------ctc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2899466 64 - 123690457 ---------------------------------------------------------TTTTCAAATTTTGACACACACAGAGCTGTGTCTCTAAGTCTCAGCACAAT-CAGGAAAcagc------ttc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179836582 89 - 180051392 AAGATACAGT----AAAATAAACT-------------CACCATTTTTAGTGTA--GTTTTTCAAATTTTAGTACACAGAGAGCTGTGTCCGT-------------AT-CAGGAAAcagc------ctc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1307955 100 + 181584905 aagatagagt----aaaataaaCT-------------CATCATTTTTAGTATAGGGTTTTTCAAATTTTGACACACACAGAGCTGTGTCTGTA----TTAGCACAAT-CAGGAAAcagc------ctc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 62143 89 + 100774 AAGATACAGT----AAAATAAACT-------------CACCATTTTTAGTGTA--GTTTTTCAAATTTTAGTACACAGAGAGCTGTGTCCGT-------------AT-CAGGAAAcagc------ccc i macNem1.NW_012013899v1 C 0 C 0 s manLeu1.NW_012101728v1 59031 98 + 74206 AAGATACAGT----AAAATAAACT-------------CACCATTTTTAGTGTA--GTTTTTCAAATTTTGACACACACAGAGCTGTGTCTATA----TTAGCACAAT-CAGGAAAcagc------ctc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 793329 100 - 1687011 AAGATACAGC----AAAATAAACT-------------CATCATTTTTAGTATAGGGTTTTTCAAATTTTGACACACACAGAGCTGTGTCTGTG----TTAGCACAAT-CAGGAAAcagc------ctc i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158685 107 + 204313951 AAGATACAGTAAAAAAAAAAAACT-------------CGCCATTTTTAGTGTAGTATTTTTCAAATGCTGACACACACAGAGCTGTGTAT-TAACTATGAGCACAAT-CAGGAAAcagc------ctc i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 87775 107 - 306014 AAGATACAGTAAAAAAAAAAACCT-------------CGCCATTTTTAGGGTAGCATTTTTTAAATGTTGACACGCACAGAGCTGTGTAT-TAAGTATCAGCACAAT-CAGGAAATAGC------CTC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 131640 102 - 211231 AAGATACAGT----AAAAAAACCT-------------CGCCATTTTTAGTGTAGTATTTTTCAAATGTTGACACACACAGAGCTGCGTCT-TAAGCGTCAGCACAAT--AGGAAAcagc------ctc i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2118392 106 - 2165740 AAGATATAAC----AAAATACATT-------------CACAATGTCCAGTGTAGGTTTTTTAAAGTTTTCATATGCACAGAGCTGTGT---TAAGGCCCAACACAGA--ATGTAATTGCATATAACTG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74329382 107 + 120421639 --AAGACAGT----GAAATTTGTTGTCTTTTTGTTTACATTTTTTTTTTAGTAGAGCTTTTCAGGTTTTGG--CAAATAGAGTCATGTT--TAAGTAAAAcccccac-tag--cccagc--------c i mm10.chr13 C 0 C 0 s dasNov3.JH577625 360139 91 - 913073 AGAACACAGT----AAAAT----C-------------CACCCCTCTTAGAGTAGTGTTCTGCACGTGTGGACCAATGCAGAGCTGGG----------CAGGCACTACACGAGACAGagc------tcc i dasNov3.JH577625 I 36 C 0 e saiBol1.JH378155 16300064 906 + 16417988 I e canFam3.chr34 11946929 149 + 42124431 I e chlSab2.chr4 1398651 323 + 91010382 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=898552.000000 s hg38.chr3_KI270934v1_alt 117333 134 + 163458 tggcaaccaccaatcccttttcttccctaga----------tgtgccttgtccagaatgtcctatcaacaggaccacagg-cgtgcagccttttgagtccgact-ccA-----CAGC--ATT--------------CTGCG--T---GAGA-----------TGCTGCATGTGTG--------------------------------AGCGG----TTT-------------------- s panTro5.chr3 2587683 134 - 202621043 tggcaaccagcaatcccttttcttccctaga----------tgtgccttttccagaatgtcgtatcaacaggatcacagg-cgtgcagccttctgagtccgact-ccA-----CAGC--ATT--------------CTGCG--T---GAGA-----------TGCTGCATGTGTG--------------------------------AGCGG----TTT-------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 174892 134 - 190779 tggcaaccagcaatcccttttcttccctaga----------tgtgccttttccagaatgtcgtatcaacaggatcacagg-cgtgcagccttctgagtccgact-ccA-----CAGC--ATT--------------CTGCG--T---GAGA-----------TGCTGCATGTGTG--------------------------------AGCGG----TTT-------------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 9936 133 + 880730 tggcaaccagcaatcccttgtcttccctaga----------tgtgccttttccagaatgtcatatcaacaggaccacagg-tgtgcagcctt-tgagtgtgact-cca-----cagc--att--------------ctgct--t---gaga-----------tGCCGCATGTGTG--------------------------------AGCGG----TCT-------------------- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2899530 134 - 123690457 tggcaaccaccaatcccttttcttccctaga----------tgtgccttttccagaatgtcgtatcaacagaaccacagg-tgtgcagccttttgagtctgact-ccA-----CAGC--ATC--------------CTGCA--T---GAGA-----------TGCTGCATGTGTG--------------------------------AGCAG----TTT-------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179836671 134 - 180051392 tggcaaccaccaatcccttttcttccctaga----------tgtgccttttccagaatgttgtattaagagagccacagg-tgtgcagccttttgagtctgact-cca-----cagc--att--------------ctgca--t---gaga-----------tGCTGCATGCGTG--------------------------------AGCGG----TTT-------------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1308055 134 + 181584905 tggcaaccaccaatcccttttcttccctaga----------tgtgccttttccagaatgttgtatcaagagagtcacagg-tgtgcagtcttttgagtctgact-ccA-----CAGC--ATT--------------CTGCG--T---GAGA-----------TGCTGCATGTGTG--------------------------------AGCGG----TTT-------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 62232 134 + 100774 tggcaaccaccaatcccttttcttccctaga----------tgtgccttttccagaatgttgtattaagagagccacagg-tgtgcagccttttgagtctgact-ccA-----CAGC--ATT--------------CTGCG--T---GAGA-----------TGCTGCATGCGTG--------------------------------AGCGG----TTT-------------------- i macNem1.NW_012013899v1 C 0 C 0 s manLeu1.NW_012101728v1 59129 134 + 74206 tggcaaccaccaatcccttttcttccctaga----------tgtgccttttccagaatgtcgtatcaagacagccacagg-tgtgcagccttttgagtctgact-ccA-----CAGC--ATT--------------CTGCG--T---GAGA-----------TGCTGCATGCGTG--------------------------------AGCGG----TTT-------------------- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 793429 134 - 1687011 tggcaaccaccaatcccttttcttccctaga----------tgtgccttttccagaatgtcgtatcaagagaaccacagg-tgtgcagccttttgagtctgact-ccA-----CAGC--ATT--------------CTGCG--T---GAGA-----------TGCTGCATGCGTG--------------------------------ACCGG----TTT-------------------- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158792 133 + 204313951 tggcaacccctgacccctcttcttccctgga----------tgtgccttttccagaatgctgtatcaacagagcctcagg-tgtgcagcgttttgagtctgact-ccA-----CAAC--ATT--------------CTGCG--T---GAG------------TGCTGCATGCATG--------------------------------AGCGG----TTT-------------------- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 87882 131 - 306014 TGGTAACCCCCGA-CCCTCTTCTTCCCCAGA----------TGTGCCTTTTCCAGAATGTTGTATCAACAGAACCACAGG-TGTGCAGC--CCTGAGTCTGACT-CCA-----CAGC--ATT--------------CTGCG--T---GAGA-----------TGCTGCATGCATG--------------------------------AGCGG----TTT-------------------- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 131742 134 - 211231 cggcaacccccagcccctcttcttccctaga----------tgcgccttttccagaacgttgtatcgacagagccacagg-tgtgcagcctctcgagtctgact-ccA-----CAGC--ATT--------------CTGCG--T---GAGA-----------TGCTGCACGCACG--------------------------------AGCGG----TTT-------------------- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2118498 109 - 2165740 TGGC-ACCACTCCTCACTTTTCTTCTCTGCAGTT------TTTTGCCTTTTCCAGCATATCATATAAAGAGATTTGCGTG-TGTGGGG--------------------------------------------------ACG--T---TAGA-----------CTCTGTGTGTGGG--------------------------------AGCAG----TTT-------------------- i otoGar3.GL873745 C 0 I 323 s mm10.chr13 74329489 141 + 120421639 tagcaaccatga--tctgtttctgccttacag---------cttgcaatttccagaat----------taaaaacaca---tgtgcagtcttttgagtctTACT-CTA------AAC--ATTTAGTCCTTTCATTGCTGAA--TTTAAAAA-----------TTCTTAATGTATT--------------------------------TGTAGAACCTTT-------------------- i mm10.chr13 C 0 I 1 s canFam3.chr34 11947078 146 + 42124431 tggcaaccactgagccagcttattcctcagt----------tttgtctcttccataatgttatataaatag--tcagata-tatgaaaccttttgagcctgattaata-----caacttaat--------------atgtc--t---gagatccatttgtgctgttgcacgaaca--------------------------------aggaa----ttt-------------------- i canFam3.chr34 I 149 I 52 s dasNov3.JH577625 360230 215 - 913073 tggcaaccattgaactcttttcttctttatagttctacagctcagctctttctagagtgccatataaatcaagtcatatattgtgcagccttttgagtctggct-tctttcatcagc--aca--------------atgcactt---gaaattcatccatggtgctgcatgtatggtaatttggcccttttcactgctgagtTTTAAAACAA----TTTTTAAAAATGTTCATTGATCC i dasNov3.JH577625 C 0 C 0 e saiBol1.JH378155 16300064 906 + 16417988 I e chlSab2.chr4 1398651 323 + 91010382 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=36909.000000 s hg38.chr3_KI270934v1_alt 117467 4 + 163458 CTCA s panTro5.chr3 2587817 4 - 202621043 CTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 175026 4 - 190779 CTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 10069 4 + 880730 CTCA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2899664 4 - 123690457 CTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179836805 4 - 180051392 CTCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1308189 4 + 181584905 CTCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 62366 4 + 100774 CTCA i macNem1.NW_012013899v1 C 0 C 0 s manLeu1.NW_012101728v1 59263 4 + 74206 CTCA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 793563 4 - 1687011 CTCA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158925 4 + 204313951 TTCA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 88013 4 - 306014 CTCA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 131876 4 - 211231 CTCA i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74329631 4 + 120421639 CCTA i mm10.chr13 I 1 C 0 s canFam3.chr34 11947276 4 + 42124431 TTCA i canFam3.chr34 I 52 C 0 s dasNov3.JH577625 360445 4 - 913073 TTCA i dasNov3.JH577625 C 0 C 0 e saiBol1.JH378155 16300064 906 + 16417988 I e otoGar3.GL873745 2118607 323 - 2165740 I e chlSab2.chr4 1398651 323 + 91010382 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=33254.000000 s hg38.chr3_KI270934v1_alt 117471 5 + 163458 GATGT s panTro5.chr3 2587821 5 - 202621043 GATGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 175030 5 - 190779 GATGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 10073 5 + 880730 GATGT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2899668 1 - 123690457 G---- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179836809 5 - 180051392 GATGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1308193 5 + 181584905 GATGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 62370 5 + 100774 GATGT i macNem1.NW_012013899v1 C 0 I 621 s manLeu1.NW_012101728v1 59267 5 + 74206 GATGT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 793567 5 - 1687011 GATGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158929 5 + 204313951 GATGT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 88017 5 - 306014 GATGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 131880 5 - 211231 GATGT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2118930 5 - 2165740 GATGT i otoGar3.GL873745 I 323 I 1 s mm10.chr13 74329635 2 + 120421639 --TA- i mm10.chr13 C 0 C 0 s canFam3.chr34 11947280 5 + 42124431 GATAT i canFam3.chr34 C 0 I 1 s dasNov3.JH577625 360449 5 - 913073 GATAT i dasNov3.JH577625 C 0 C 0 e saiBol1.JH378155 16300064 906 + 16417988 I e chlSab2.chr4 1398651 323 + 91010382 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=41213.000000 s hg38.chr3_KI270934v1_alt 117476 8 + 163458 -CAAGTATA-------------------- s panTro5.chr3 2587826 8 - 202621043 -CAAGTATA-------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 175035 8 - 190779 -CAAGTATA-------------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 10078 8 + 880730 -CAAGTATA-------------------- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2899669 7 - 123690457 --AAGTATA-------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179836814 8 - 180051392 -AAAGTATA-------------------- i rheMac8.chr6 C 0 I 319 s macFas5.chr6 1308198 8 + 181584905 -AAAGTATA-------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 62996 8 + 100774 -cAAGTATA-------------------- i macNem1.NW_012013899v1 I 621 C 0 s manLeu1.NW_012101728v1 59272 8 + 74206 -AAAGTATA-------------------- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 793572 8 - 1687011 -CAAGTACA-------------------- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158934 8 + 204313951 -AAAGTATG-------------------- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 88022 8 - 306014 -AAGGTAGA-------------------- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 131885 8 - 211231 -ACAGGATA-------------------- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2118936 8 - 2165740 -AAAGTATA-------------------- i otoGar3.GL873745 I 1 C 0 s mm10.chr13 74329637 8 + 120421639 -AAAGTATA-------------------- i mm10.chr13 C 0 C 0 s canFam3.chr34 11947286 8 + 42124431 -AAATTATA-------------------- i canFam3.chr34 I 1 C 0 s dasNov3.JH577625 360454 29 - 913073 AAGAGTACAGGGTATTTTTTTTTTTTTTA i dasNov3.JH577625 C 0 C 0 e saiBol1.JH378155 16300064 906 + 16417988 I e chlSab2.chr4 1398651 323 + 91010382 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=361121.000000 s hg38.chr3_KI270934v1_alt 117484 44 + 163458 GGGTATTCTCACAAAATGTTC-TTTTC-----TGCATTTTCAAAGAAAGA s panTro5.chr3 2587834 44 - 202621043 GGGTATTCTCACAAAATGTTC-TTTTC-----TGCATTTTCAAAGAAAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 175043 44 - 190779 GGGTATTCTCACAAAATGTTC-TTTTC-----TGCATTTTCAAAGAAAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 10086 44 + 880730 GGGTATTCTCACAAAATGTTC-TTTTC-----TGCATTTTGAAAGCAAGA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2899676 44 - 123690457 GGGTATTCTTACAAAATGTTC-TTTTC-----TGCATTTTCAAAGAAAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179837141 45 - 180051392 GGGTATTCTTACAAAATGTTCTTTTTT-----TACATTTGCAGAGAAAAA i rheMac8.chr6 I 319 C 0 s macFas5.chr6 1308206 44 + 181584905 GGGTATTCTTACAAAATGTTC-TTTTT-----TGCATTTTCAAAGAAAGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 63004 45 + 100774 GGGTATTCTTACAAAATGTTCTTTTTT-----TGCATTTTCAGAGAAAAA i macNem1.NW_012013899v1 C 0 C 0 s manLeu1.NW_012101728v1 59280 45 + 74206 GGGTATTCTTACAAAATGTTCTTTTTT-----TGCATTTTCAGAGAAAAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 793580 44 - 1687011 GGGTATTCTTACAAAATGTTC-TTTTT-----TGCATTTTCAAAGAAAGA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158942 44 + 204313951 GGATATTCTTATAAAATGTTC-TTTTT-----TGCATTTTCAAAGAAAGA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 88030 44 - 306014 GGATATTCTTATAAAATGTTC-TTTTT-----TGCATTTTCAAAGAAAGA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 131893 44 - 211231 GGATATTCTTATAAAATGTTC-TTTTT-----TGCATTTTCAAAGAAAGA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2118944 37 - 2165740 AGGTATTCTTATGAGACTTCT-------------CATTTTCAAAGAAAGA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74329645 42 + 120421639 ATCTATTCTTTTAAAACAATT-TTTCT-------CATTCTCAAAGCAGGG i mm10.chr13 C 0 C 0 s canFam3.chr34 11947294 44 + 42124431 AGATATTCTTATAAAACTTGC-TTTTT-----CTCATTTCCAAAAAAAGG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 360483 49 - 913073 GGGTATTCTTTTATAACCTTT-TTTTTTTTCCTTCATTTTCAGAGAGAAG i dasNov3.JH577625 C 0 C 0 e saiBol1.JH378155 16300064 906 + 16417988 I e chlSab2.chr4 1398651 323 + 91010382 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=263282.000000 s hg38.chr3_KI270934v1_alt 117528 27 + 163458 GAAGCTCAAAATTTCTACACTGCTCTG s panTro5.chr3 2587878 27 - 202621043 GAAGCTCAAAATTTCTACACTGCTCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 175087 27 - 190779 GAAGCTCAAAATTTCTACACTGCTCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 10130 27 + 880730 GAAGCTCAAACTTTGTACACTGCTCTG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2899720 27 - 123690457 GAAGCTCAAAATTTCTACATTGCTCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179837186 27 - 180051392 GAAGCTCAAAATTTCTACATTGCTCTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1308250 27 + 181584905 GAAGCTCAAAATTTCTACATTGCTCTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 63049 27 + 100774 GAAGCTCAAAATTTCTACATTGCTCTT i macNem1.NW_012013899v1 C 0 C 0 s manLeu1.NW_012101728v1 59325 27 + 74206 GAAGCTCAAAATTTCTACATAGCTCTG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 793624 27 - 1687011 GAAGCTCAAAATTTCTACATTGCTCTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158986 27 + 204313951 GAAGCTCAAACTTTCTATATTGCTGGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16300970 27 + 16417988 GAAGCTCAAAATTCCTATACTGCTCTG i saiBol1.JH378155 I 906 C 0 s cebCap1.NW_016108150v1 88074 27 - 306014 GAAGCTCAAAATTTCTATACTGCTCTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 131937 27 - 211231 GAAGCTCAAAATTTCTATACTGCTCTG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2118981 26 - 2165740 -AAACCTTGAATTTCTGCTTTGCTCTA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74329687 23 + 120421639 ---AATCTGAGTCTCCACTTTGCTCT- i mm10.chr13 C 0 C 0 s canFam3.chr34 11947338 27 + 42124431 GAACTTTGAATTTTCTGCTTTGCCCTG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 360532 27 - 913073 GAAGCTCAAATTTTCTGCTTTGCTCTG i dasNov3.JH577625 C 0 C 0 e chlSab2.chr4 1398651 323 + 91010382 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=2431184.000000 s hg38.chr3_KI270934v1_alt 117555 291 + 163458 AGAGAAGTGGTATCAGACCTCACTGCGACAAAGTGCAGGGCTATGGAGTGAGACAAGCACAACCTGTGGCGTCAGG-AGCGAGGCACCTGAACTCCGCCTTCGCCGATGATCAGCAACGGCTGGGGATGAGACGCCGGCTCTGCATGTGCTGGCCTCCT-GAGCTG-TCGTCAGATCCACAGAGACACAGTGTCTGAA----GT-AGCTACCCTTT--TAATACTGCCTGTACCTTTCTAACTACAGATAGAAAAGGGT------CATGTT--------------TA---TAA--GGTACGGCGGTGCTAGTTTTTAT---TTCACTTG s panTro5.chr3 2587905 291 - 202621043 ATAGAAGTGGTATCAGACCTCACTGCT-CAAAGTGCAGGGCTATGGAGTGAGACAAGCACAACCTGTGGCGTCAGG-AATGATGCACCTGAACTCCGCCTTCGCCGATGATCAGCAACGGCTTGGGATGAGACGCCAGCTCTGCATGTGCTGGCCTCCT-GAGCTG-TCGTCAGATCCACAGAGACAGAGTGTCTGAA----GT-AGCTACCCTTT--TAATACTACCTGTACCTTTCTAACTACAGATATAAAAGGGTG-----CATGTT--------------TA---TAA--GGTTCGGCAGTGCTAGTTTTTAT---TTCACTTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 175114 291 - 190779 ACAGAAGTGGTATCAGACCTCACTGCT-CAAAGTGCAGGGCTATGGAGTGAGACAAGCACAACCTGTGGCGTCAGG-AATGATGCACCTGAACTCCGCCTTCACCGATGATCAGCAACGGCTTGGGATGAGACGCCGGCTCTGCATGTGCTGGCCTCCT-GAGCTG-TCGTCAGATCCACAGAGACACAGTGTCTGAA----GT-AGCTACCCTTT--TAATACTACCTGTACCTTTCTAACTACAGATATAAAAGGGTG-----CATGTT--------------TA---TAA--GGTTCGGCAGTGCTAGTTTTTAT---TTCACTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 10157 294 + 880730 AGAGAAGTGGTAGCAGACGTCACTGCGACAAAGTGCAGGGCTACGGAGTGAGACAAGCACTACCTGTGGCGTCAGGAAACGATGCACCTGAACTCCGCCTTCGCCGATGATCAGCAACGGCTTGGGATGAGACGCCGGCTCTGCGTGTGCTGGCCTCCT-GAGCTG-TCGTCAGATCCACAGAGACACAGTGTCTGAA----GTAAGCTACCCTTT--TAATACTACCTGTACCTTTCTAACTACAGATAGAAAAGGGCG-----CATGCT--------------TA---TAA--GTTACGGAGGTGCTAGTTTTTAT---TTCACTTG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2899747 293 - 123690457 AGAGAAGTGGTATCAGTCCTCACTGCTACAAAGTGCAGGGCTATGGAATGAGACAAGCACAACCTGTGGCGTCAAG-AACGACGGACCTGAACTCCGCCTCCACCCATGATCAGCAATGGCTTGGGATAAGACGCCAGCTCTGCGTGTGCTGGCCTCCT-GGGCTG-TGGTCAGATCCACAGAGACAGAGTGTCTGAA----GTAAGCTACCCTTT--TAGTACTATCTGTACCTTTCTAACTACAGATATAAAAGGGCG-----CATGTT--------------TA---TAA--GTTATGGCAGTGCTAGTTTTTAT---TTCACTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179837213 291 - 180051392 AGAGAAGTGGTATCAGTCCTCACTGCTACAAAGTGCAGGGCTATGGAGTGAGACAATCACAACCTGTGGCGTCAGG-AGCGATGGACCTGAACTCTGCCTTCGCCCATGGTCAGCAGTGACTTGGGGTAAGACGCCAGCTCTGCGTGTGCTGGCCTCCC-GAGCTG-TGGTCAGATC--CAGAGACAGAGTGTCTGAA----GTAAGCTACCTTTT--TAATACTCTCCGTACCTTTCTAACTACAGATATAAAAGCGGG-----CATGTT--------------TA---TAA--GTTACAGCAGTCCTAGTTTTTAT---TTCACTTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1308277 290 + 181584905 AAAGAAGTGGTATCAGTCCCCACTGCTACAAAGTGCAGGGCTATGGAGTGAGACAAGCACAACCTGTGGCATCAGG-AACGATGGACCTGAACTCCGCCTTCGTCCATGATCAGCAGCGACTTGGGGTAAGACTCCAGCTCTGCATGTGCTGGCCTCCC-GAGCTG-TGGTCAGATC--CAGAGACAGAGTGGCTGAA----GTAAGCTACCCTTT--TAGTACTCTCTGTA-TTTTCTAACTACAGATATAAAAGGGGG-----CATGTT--------------TA---TAA--GTTACGGCAGTCCTAGCTTTTAT---TTCACTTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 63076 291 + 100774 AGAGAAGTGGTATCAGTCCTCACTGCTACAAAGTGCAGGGCTATGGAGTGAGACAATCACAACCTGTGGCGTCAGG-AGCGATGGACCTGAACTCCGCCTTCGCCCATGGTCAGCAGCGACTTGGGGTAAGACGCCAGCTCTGCATGTGCTGGCCTCCC-GAGCTG-TGGTCAGATC--CAGAGACAGAGTGTCTGAA----GTAAGCTACCTTTT--TAATACTCTCCGTACCTTTCTAACTACAGATATAAAAGCGGG-----CATGTT--------------TA---TAA--GTTACAGCAGTCCTAGTTTTTAT---TTCACTTG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1398974 291 + 91010382 AGAGAAGTGGTGTCAGTCCTCACTGCTACAAAGTGCAGGGCTGTGGAGTGAGACAAGCACACCCTGTGGCGTCAGG-AGCGATGGACCTGAACTCCGCCTTCGCCCAGGATCAGCAGCGACTTGGGGTAAGACTCCAGCTCTGCATGTGCTGGCCTCCC-GAGCTG-TGGTCAGATC--CAGAGACAGAGTGGCTGAA----GTAAGCTACCCTTT--TAGTACTCTCTGTAATTTTCTAACTACAGATATAAAAGGGGG-----CATGTT--------------TA---TAA--GTTACGGCAGTCCTAGTTTTTAT---TTCACTTG i chlSab2.chr4 I 323 C 0 s manLeu1.NW_012101728v1 59352 291 + 74206 AGAGAAGTGGTATCAGTCCCCACTGCTACAAAGTGCAGGGCTATGGAGTGAGACAAGCACAACCTGTGGCGTCAGG-AGCGATGGACCTGAACTCCGCCTTCGCCCATGGTCAGCAGCGACTTGGGGTAAGACTCCAGCTCTGCGTGTGCTGCCCTCCC-GAGCTG-TGGTCAGATC--CAGAGACAGAGTGTCTGAA----GTAAGCTACCTTTT--TAATACTCTCCGTACCTTTCTAACTACAGATATAAAAGCGGG-----CATGTT--------------TA---TAA--GTTATGGCAGTCCTAGTTTTTAT---TTCACTTG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 793651 291 - 1687011 AGAGAAGTGGTATCAGTCCTCACTGCTACAAAGTGCAGGGCTATGAAGTGAGACAAGCACAACCTGTGGCGTCAGG-AACGATGGACCTGAACTCCGCCTTCGCCCATGATCAGCAGCGACTTGGGGTAAGACGCCAGCTCTGCGTGTGCTGGCCTCCC-GAGCTG-TGGTCAGATC--CAGAGACAGTGTGTCTGAA----GTAAGCTACCTTTT--TAATACTCTCCATACCTTTCTAACTACAGATATAAAAGCAGG-----CATGTT--------------TA---TAA--GTTACGGCAGTCCTAGTTTTTAT---TTCACTTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204159013 297 + 204313951 AGAGAAGTGGTATCAGTCCTCACTGCTGCAaagtgcagggctatggagtgagacaaacactacctgtggcgtcagg-aaggatggacctgaactctgcctttgccaatgatcagcaacgacctgggacaagacgccacctctgcacgtgccagcctcct-gagctg-tGGTCAAATCCACAGAGACTGAGTGTGTGAA--ATGTAAGCTACCCTTT--TAATACTACCTGTACCTTTTTAACCACAGATACAAAAGGGGGC---ACATGTT--------------TG---TAA--GTTACGACAGTGCTCGTTTTTAC---TTTGCTTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16300997 295 + 16417988 AGAGAAGTGGTACCAGTCCTTACTGCTACAaagtgcagggctatggagtgagacaagcactatctgtggcttcagg-agagacggacctgaactctgcctttggcaatgatcagcaatgacctgggacaagacgccacctctgcatgtggcagcctcct-gagctg-tGGTCAAATC--CAGAGACTGAGTGTGTGAA--ACGTAAGCTACCCTTT--TAATACAACCTGTACCTTTTAAACCACAGATACAAAAGGGGGT---ACATGTT--------------TA---TAA--GTTATGACACTGCTCATTTTTAT---TTCACTTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 88101 291 - 306014 AGAGAAGTGGTATCAGTCCTCACTGCTACAAagtgcagggctatg----gagacaagcactacctgcggcgtcagg-aaagacggacctgaactctgcctttgccaatgatcagcaacgacctgggacaagatgccacctctgcatatgccagcctcct-gagctg-tGGTCAAATC--CAGAGACTGAGTGTGTGAA--ATGTAAGCTACCCTTT--CAATACGACCTGTACCTTTTTAACCACAGACACAAAAGGGGGC---ACATGTT--------------TA---TAA--GTCATGACAGCACTTGTTTTTAT---TTCACTTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 131964 296 - 211231 AGAGAAGTGGCATCGGTCCTCACCGCTACAAAGTGCAGGGCTATGGAGTGAGACAAGCACGACCCGTGGCGTCAGG-AAAGATGGACCTGAACTCGGCCTTTGCCAGCGATCAGCGACGACTTGGGACGAGACGCCACCTGTGCACGTGCCGGCCTCCT-GAGCCG-CAGTCAGATCCACAGAGACTGAGTGTGTGAA--ATGTAAGCTGCCCTTT--TAACACT-CCCGTACCTTTCTAACCACAGATGCGCAAGGAGGT---GCATGTT--------------TG---TAA--GTTACGACAGTGCTCGCTTTTGT---TTCACTTG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2119007 290 - 2165740 AGAGAAGTGGCATTGGTCCTCACCACTACAAAGTACAGGATTACCAAGTGGGACAAGCATTGCCTGTGGTGTCAGG-AAAGACAGATCTGAGCCCTGCCTTTGCAGCTGACCAGCAAGGACTCAGGATGAGGAGCCATTTCTGCATGTGCTGG-CTCCT-GAGCTA-TGGTCATATA--CA-AGAC--AGTATGTGAA--ATGTAACCTGCCTTT-------ATTCTTTGCATTTTTCTAACTACAAACATATAAAGGAG-----TATGTT--------------AACAGTAC--AATAAAACTGTGCTAGTTTCTGTATCATCATTTC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74329710 227 + 120421639 --AGATGAGCTTTTGACCCTCC------CAAAG-------------------------GCTACATTTGGTGTCGGA-GAAGAT-CCTTTGAGCCCTGCTTATGCAACTGGACAGCA----CTAAGGACCAGGAACTGTCTTCACATTTA-----GACTT-GTGCTA-TGGTATGACTAGGAGTGTGAAGATATGTAAAATATGTAAAATG------------ATTACCCAAACCTTTCTCTTTAC--------------------CA-------------------G---TGA--GGCAAGGATGTGCTGGTCTCTGCACCATCACTAC i mm10.chr13 C 0 C 0 s canFam3.chr34 11947365 270 + 42124431 --GGATTTTATTTCAGGCTTCACCATtaca-----------------gtgagacaagcactagattgggggtcaga-ccaggtggttttgactcctgcctttg--------cAGCAAAAA-TGGGCACAGGGCCCTACCTCTGCCTTT--TAGCCT--G-GACTTG-CAGTCAGAGC--AAGAGAGAAGGTGTTTGAA-AACATAACTGTCCATTTCGTTATATTATCTG-------CTAACTGCAGATATAAAGGGGAGTGCAGCTTGTTATACTGAGGGCTAATA---TAACTAGTAGGACAGTAAGAGTTAAAAT----------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 360559 280 - 913073 TGAAATTTAATCTCAGTCCTCACTGCTACAAAATGGAGGACCATATAGAGAAATGAGCCAA---TAtggtatcaga-aaatacagatttgaatcttgcttttgcaaatgactggcaataactggagacaaggcaccatctcccagcgcttcagcttcctGGGGCTGTTGATCAAATCATCTCAGAGAATATATCTGAA-GATGCAACCTGCCACTT--T--CATCATTTGCATCTTCATAACCGTAGACATGGAAGGGGG-------------------------TA--------G----GGTAGGCCTAACACTTGC---TATACTTT i dasNov3.JH577625 C 0 I 92 e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=28122.000000 s hg38.chr3_KI270934v1_alt 117846 14 + 163458 AGTCCATAC------AAAAA s panTro5.chr3 2588196 14 - 202621043 AGTCCATAC------AAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 175405 14 - 190779 AGTCCATAC------AAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 10451 14 + 880730 AGTCCATAC------AAAAA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2900040 20 - 123690457 TATTTGCTCTTTTCAACAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179837504 9 - 180051392 AATCCACAC----------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1308567 9 + 181584905 AATCCATAC----------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 63367 9 + 100774 AATCCACAC----------- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1399265 9 + 91010382 AATCCACAC----------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 59643 9 + 74206 AATCCACAC----------- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 793942 9 - 1687011 AATCCATAC----------- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204159310 5 + 204313951 AATCC--------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16301292 14 + 16417988 AATCCACAC------AAAAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 88392 14 - 306014 AATCCATAC------AAAAA i cebCap1.NW_016108150v1 C 0 I 150 s aotNan1.NW_018494784v1 132260 14 - 211231 AATCCATAC------AAAAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2119297 14 - 2165740 AATCCATAC------AAAAA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74329937 14 + 120421639 TGTTCATCC------AGAAC i mm10.chr13 C 0 C 0 s canFam3.chr34 11947635 5 + 42124431 ---CCATA------------ i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 360839 92 - 913073 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=11763.000000 s hg38.chr3_KI270934v1_alt 117860 3 + 163458 GCA s panTro5.chr3 2588210 3 - 202621043 GCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 175419 3 - 190779 GCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 10465 3 + 880730 GCA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2900060 3 - 123690457 GCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179837513 1 - 180051392 --A i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1308576 1 + 181584905 --A i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 63376 1 + 100774 --A i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1399274 1 + 91010382 --A i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 59652 1 + 74206 --A i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 793951 1 - 1687011 --A i colAng1.NW_012116910v1 C 0 C 0 s saiBol1.JH378155 16301306 3 + 16417988 GTA i saiBol1.JH378155 C 0 I 138 s aotNan1.NW_018494784v1 132274 3 - 211231 GCA i aotNan1.NW_018494784v1 C 0 I 8 s otoGar3.GL873745 2119311 1 - 2165740 --A i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74329951 3 + 120421639 GCA i mm10.chr13 C 0 C 0 s canFam3.chr34 11947640 1 + 42124431 --A i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 360839 92 - 913073 I e calJac3.chr2 204159315 0 + 204313951 C e cebCap1.NW_016108150v1 88406 150 - 306014 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=493452.000000 s hg38.chr3_KI270934v1_alt 117863 111 + 163458 AAAAGCGCCTGTTCTATAAAAACAGCAGAAATGATGCTAAACAGT------------------TAACACCAGAGAAAGCTAACGGG------------------AAGAA-----------CGTGGGCC----TGGGGTCCCACCATCCTTGCCACGCAAACA s panTro5.chr3 2588213 111 - 202621043 AAAAGCGCCTGTTCTATAAAAACAGCAGAAATGATGCTAAACAGT------------------TAACACCAGAGAAAGGTAACGGG------------------AAGAA-----------CGTGGGCC----TGGGGTCCCACCATCCTTGCCACGCAAACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 175422 111 - 190779 AAAAGCGCCTGTTCTATAAAAACAGCAGAAATGATGCTAAACAGT------------------TAACACCAGAGAAAGCTAACGGG------------------AAGAA-----------CGTGGGCC----GGGGGTCCCACCATCCTTGCCACACAAACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 10468 111 + 880730 AAAAGCGCCTGTTCTATAAAAACAGCAGAAATGATGCTCAACCGT------------------TAACACCAGAGAAAGCTAACGGG------------------AAGAA-----------CGTGGGCC----TGGGGTCCCACCATCTTTGCCACGCAAACA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2900063 111 - 123690457 AAAAGCACCTGTTCTATAAAAACAGCAGAAATCATGCTAAACAGT------------------TAACACCAGAGAAACGTAACGGG------------------AAGAA-----------CGTGGGCC----TGGGGTCCCACCATCCTTGCCACACAAACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179837514 111 - 180051392 AAAAGCACCTGTTCTATTAAAACAGCAGAAAGGATGCCAAACAGT------------------TAACACCAGAGAAAGGTAACGGG------------------AAGAA-----------TGTGGGCC----TGGGGTCCCACCATCCTTGCCACACAAACA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1308577 111 + 181584905 AAAACCACCTGTTCTATAAACACAGCAGAAATGATGCCAAACAGT------------------TAACATGAGAGAAAGGTAACGGG------------------AAGAA-----------TGTGGGCC----TGGGGTCCCACCATCCTTGCCACACAAACA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 63377 111 + 100774 AAAAGCACCTGTTCTATTAAAACAGCAGAAAGGATGCCAAACAGT------------------TAACACCAGAGAAAGGTAACGGG------------------AAGAA-----------TGTGGGCC----TGGGGTCCCACCATCCTTGCCACACAAACA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1399275 111 + 91010382 AAAACCACCTGTTCTATAAACACAGCAGAAATGATGCCAAACAGT------------------TAACACCAGAGAAAGGTAACGGG------------------AAGAA-----------TGTGGGCC----TGGGGTCCCACCATCCTTGCCACACAAACA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 59653 111 + 74206 AAAAGCACCTGTTCTATTAAAACAGCAGAAAGGATGCCAAACAGT------------------TAACACCAGAGAAAGGTAACGGG------------------AAGAA-----------TGTGGGCC----TGGGGTCCCACCATCCTTGCCACACAAACA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 793952 111 - 1687011 AAAAGCACCTGTTCTATAAACACAGCAGAAAGGATACCAAACAGT------------------TAACACCAGAGAAAGGTAACGGG------------------AAGAA-----------TGTGGGCC----TGGGGTCCCACCATCCTTGCCACACAAACA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204159315 17 + 204313951 ---------------ATACAAACAGC-------------ACCAGT--------------------------------------------------------------------------------------------------------------------- i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 2119312 156 - 2165740 ------ATTTGCTCTATAAAAACAGCTGCAGTGgccaggtgctgtggttcacgcctgtaatcctagcactctgggaggctgaggtgggtggatcacttaagcccaggaatttgaggttgctgtgagctatgatgatgcatcagcactctacccaggagaacc i otoGar3.GL873745 C 0 I 5 s mm10.chr13 74329954 84 + 120421639 -------CCCGCTCTATATCAACTACAACTGACATCC---ACAAG------------------TAACA--GAGGAAAGAAAAATGG------------------ATGGA-----------ACAGGGAG----AGGGATC------TCTATGCC--------- i mm10.chr13 C 0 C 0 s canFam3.chr34 11947641 111 + 42124431 AAAAACTTTTGTTTGATAAAAACAGAACAACTGAGACTAAACAGT------------------TACCACCAGTGAAGCATAACGGG------------------AAGAG-----------AGGGGCCC----AGGGATCCCACAACCCTCCCTTGGGGAACA i canFam3.chr34 C 0 C 0 e aotNan1.NW_018494784v1 132277 8 - 211231 I e dasNov3.JH577625 360839 92 - 913073 I e saiBol1.JH378155 16301309 138 + 16417988 I e cebCap1.NW_016108150v1 88406 150 - 306014 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=22131.000000 s hg38.chr3_KI270934v1_alt 117974 3 + 163458 TCC s panTro5.chr3 2588324 3 - 202621043 TCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 175533 3 - 190779 TCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 10579 3 + 880730 TCC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2900174 3 - 123690457 TCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179837625 3 - 180051392 TCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1308688 3 + 181584905 TCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 63488 3 + 100774 TCC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1399386 3 + 91010382 TCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 59764 3 + 74206 TCC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 794063 3 - 1687011 TCC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204159332 3 + 204313951 TCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16301447 3 + 16417988 TCT i saiBol1.JH378155 I 138 C 0 s otoGar3.GL873745 2119473 3 - 2165740 tct i otoGar3.GL873745 I 5 I 38 e mm10.chr13 74330038 0 + 120421639 C e aotNan1.NW_018494784v1 132277 8 - 211231 I e dasNov3.JH577625 360839 92 - 913073 I e cebCap1.NW_016108150v1 88406 150 - 306014 I e canFam3.chr34 11947752 0 + 42124431 C e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=29505.000000 s hg38.chr3_KI270934v1_alt 117977 4 + 163458 ACC-------A s panTro5.chr3 2588327 4 - 202621043 ACC-------A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 175536 4 - 190779 ACC-------A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 10582 4 + 880730 ACC-------A i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2900177 4 - 123690457 ACC-------A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179837628 4 - 180051392 ACC-------G i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1308691 4 + 181584905 ACC-------G i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 63491 4 + 100774 ACC-------A i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1399389 4 + 91010382 ACC-------G i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 59767 4 + 74206 ACC-------G i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 794066 4 - 1687011 ACC-------G i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204159335 4 + 204313951 ACC-------A i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16301450 4 + 16417988 ACC-------A i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 88556 4 - 306014 ACC-------A i cebCap1.NW_016108150v1 I 150 C 0 s aotNan1.NW_018494784v1 132285 4 - 211231 ACC-------A i aotNan1.NW_018494784v1 I 8 C 0 s otoGar3.GL873745 2119514 11 - 2165740 ACCTAGGCTGG i otoGar3.GL873745 I 38 C 0 e mm10.chr13 74330038 0 + 120421639 C e dasNov3.JH577625 360839 92 - 913073 I e canFam3.chr34 11947752 0 + 42124431 C e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=815394.000000 s hg38.chr3_KI270934v1_alt 117981 96 + 163458 GTGCCTCAT------CCACCT--CA-CACTG---TTCTGAGCACACGAGGCTGCATGACCACCGTGAGGA-TCTCTGGAGG-TGGGAACGATGCTAACTGTCCTGTTCTT s panTro5.chr3 2588331 96 - 202621043 GTGCCTCAT------CCACCT--CA-CACTG---TTCTGAGCACACGAGGCTGCATAACCACCGTGAAGA-TCTCTGGAGG-TGGGAGCGATGCTAACTGTCCTGCTCTT i panTro5.chr3 C 0 I 155 s panPan2.chrUn_NW_014024201v1 175540 96 - 190779 GTGCCTCAT------CCACCT--CA-CACTG---TTCTGAGCACACGAGGCTGCATAAACACCGTGAAGA-TCTCTGGAGG-TGGGAGCGATGCTCACTGTCCTGCTCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 10586 96 + 880730 GTGCCTCAT------CCACCT--CA-CACTG---TTCTGAGCACAGGAGGCTGCATAACCACCGTGAAGA-TCTCTGGAGG-TGCGAGCGATGCTAACTGTCCTGTTCTT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2900181 96 - 123690457 GTGCCTCAT------CCACCT--CA-TACTG---TTCTGAGCACAGGAGGCTGGATAACCACCGTGAACA-TCTCTGGAGG-TGGGAGTGATGCTAACTGTCCTGTTCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179837632 96 - 180051392 GTGCTTCAT------CCACCT--CA-CACTG---TTCTGAGCACATGAGGCTGGATAACCACCGTGAAGA-TCTCTGGAGG-TGAGAGTGATGCTAACTGTCCCGTTCTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1308695 96 + 181584905 GTGCCCCAT------CCACCT--CA-CACTG---TTCTGAGCACACGAGGCTGGATAACTACCGTGAAGA-TCTCTGGAGG-TGAGAGTGATGCTAATTGTCCTGTTCTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 63495 96 + 100774 GTGCTTCAT------CCACCT--CA-CACTG---TTCTGAGCACATGAGGCTGGATAACCACCGTGAAGA-TCTCTGGAGG-TGAGAGTGATGCTAACTGTCCCGTTCTT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1399393 96 + 91010382 GTGCTTCAT------CCACCT--CA-CACTG---TTCTGAGCACACGAGGCTGGATAACCACCGTGAAGA-TCTCTGGAGG-TGGGAGCGATGCTAACTGTCCCATTCTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 59771 96 + 74206 GTGTCCCAT------CCACCT--CA-CACTG---TTCTGAGCACATGAGGCTGGATAACCACCGTGAAGA-TCTCTGGAGG-TGGGAGCGATGCTAACTGTCCCGTTCTT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 794070 96 - 1687011 GTGCCTCAT------CCACCT--CA-CACTG---TTCTGAGCACACGAGGCTGGATAACCACCGTGAAGA-TCTCTGGAGG-TGGGAGCGACACTAACTGTCCTGTTCTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204159339 95 + 204313951 GTGCCTCCT------CCACCT--CA-CAGTG---TTCTGAGGAAACGAGGCTGGATGACCACCATGAAGA-TCTCT-GAAG-TGGGAGCGAGGCTAAGTGTCCAGTTTTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16301454 95 + 16417988 GTGCCTCCT------CCACCT--CA-CACTG---TTCTGAGCAAACGAGGCTGGATGACCACCGTGAAGA-TCTCT-GAAG-CGAGAGTGATGCTAAGTGTCCAGATTTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 88560 95 - 306014 GTGCCTCCT------CCACTT--CA-CACTG---TTCTGAGCAAACGACGCTGGATAACCACCGTGAAGA-TCTCT-GAAG-TGGGAGTGGTGCTGAGTGTCCAGATTTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 132289 95 - 211231 GTGCCTCCG------CCACCT--CA-CACTG---TTCTGAGCAAACGAGGCTGGATGACCACCGTGAAGA-TCTCT-GAAG-TGGGAGCGAGGCTAAGTGTCCAGTTTTT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2119525 94 - 2165740 GTGCTTCCT------GCACCA--TA-TCCCC---TATGAAGCAAA-GAGGCTGGATAGCTGCCATGAA-A-TCCTTGTAGG-TCAGAGAAATGGCAACTATACTGCTCCT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74330038 103 + 120421639 --TCCTCATGAGGTATTATTT--CA-TACTGCTATTCTAAGAAAAC-AGACAAAACAGCTACCATGAAGGCTCCTTAGAGG-CTGGCGCTCTAGTAACCTCCTGGTTCTG i mm10.chr13 C 0 I 3 s canFam3.chr34 11947752 94 + 42124431 GTGTCT---------TCACCTAACA-TGTCG---TCGTGAACGAATGGGCCAACGTAACCCACATGAAGACCCTCTGGAAGCTCATAGCAACAGTAAGCGTCCCATT--- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 360931 73 - 913073 GCATCCCAT------CTACTG--CAGTGTGG---GTCCAAGC-----AGGAGGCACTACCACCCTG-----GCTCTGATTA-ACGGGACTTCACT--------------- i dasNov3.JH577625 I 92 C 0 e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=78776.000000 s hg38.chr3_KI270934v1_alt 118077 10 + 163458 CGTGCACATA s panTro5.chr3 2588582 10 - 202621043 CGTGCACGTA i panTro5.chr3 I 155 C 0 s panPan2.chrUn_NW_014024201v1 175636 10 - 190779 GGTGCACATA i panPan2.chrUn_NW_014024201v1 C 0 I 186 s gorGor5.CYUI01015759v1 10682 10 + 880730 CGTGCACGTA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2900277 10 - 123690457 AGTGCACGTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179837728 10 - 180051392 AGTGCACATG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1308791 10 + 181584905 AGTGCACATG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 63591 10 + 100774 AGTGCACATG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1399489 10 + 91010382 AGTGCACATG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 59867 10 + 74206 AGTGCACATG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 794166 10 - 1687011 GGTGAACATG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204159434 10 + 204313951 AGTGCACGTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16301549 10 + 16417988 AGGGCACATA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 88655 10 - 306014 AGTGCACGTA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 132384 10 - 211231 AGTGCACATA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2119619 10 - 2165740 AGTGTACGAT i otoGar3.GL873745 C 0 I 2 s mm10.chr13 74330144 8 + 120421639 --TGTACAAA i mm10.chr13 I 3 I 2 s canFam3.chr34 11947846 6 + 42124431 ----TACAGA i canFam3.chr34 C 0 I 1 e dasNov3.JH577625 361004 0 - 913073 C e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=1896953.000000 s hg38.chr3_KI270934v1_alt 118087 213 + 163458 AGACTCACACTCCCA-CACACGGTAT-TCCTT-TTCCTGCACATTATTTGACGCTATCCTGAAAAGAAAACCAGCAAGTGAAATCGAATCTGTCCGTAGAGGGTGGG---------AATC---------CTGTTCACTCTAAGTCAGCCCTTCTCCTCTAATAGAGGTTAGTTGTA-----C-TTTTAGAATGGCCTAAATTATTTTTC--TAAGTACCAAGAAGTTACA-----------------------------------------TATTCATTCATG s panTro5.chr3 2588592 218 - 202621043 AGACTCACACTCCCA-CACACGGTAT-TTCTT-TTCCCGCACATTATTTGACGCTATCATGAAAAGAAAACCAGCAAGTGAAATTGAATCTGTCCGTAGAGGGTGGG---------AATC---------CTGTTCCCTCTAAGTCAGCCCTTCTCCTCTAATAGAGGTTAGCTACAGTTTGT-TTTTAGAATGGCCTAAATTATTTTTC--TAAGTACCAAGAAGTTACA-----------------------------------------TATTCATTCATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 175832 218 - 190779 AGACTCACACTCCCA-CACACGGTAT-TTCTT-TTCCCGCACATTATTTGACGCTATCATGAAAAGAAAACCAGCAAGTGAAATCGAATCTGTCCGTAGAGGGTGGG---------AATC---------CTGTTCCCTCTAAGTCAGCCCTTCTCCTCTAATAGAGGTTAGCTATAGTTTGT-TTTTAGAATGGCCTAAATTATTTTTC--TAAGTACCAAGAAGTTACA-----------------------------------------TATTCATTCATG i panPan2.chrUn_NW_014024201v1 I 186 C 0 s gorGor5.CYUI01015759v1 10692 218 + 880730 AGACTCACACTCCCA-CACACGGTAT-TTCTT-TTCCTGCACATTATTTGACGCCATCATGAAAAGAAAACCAGCAAGTGAAATCGAATCTGTCCATAGAGGGTGGG---------AATC---------CTGTTCACTCTAAGTCAGCCCTTCTCCTCTAATAGAGGGTAGCTATAGTTTGT-TTTTAGAATGGCCTAAATTATTTTTC--TAAGTACCAAGAAGTTACA-----------------------------------------TATTCATTCATG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2900287 218 - 123690457 AGACTCACACTCCCA-CACGTGGTAT-TTCTT-TTCCTGCACGTTATTTGACACTGTCATGAAAAGAAAACCAGCAAGTGAAATCCAATCTGTCCGTAGAGGGTGGG---------AATC---------CTGTTCACTCTAAGTCAGCCCTTCTCCTCTAATAGAGGTTAGTTGTACTTTGT-TTTTAGAATGGCCTAAATTATTTTTC--TAAGTACCAAGAAGTTACA-----------------------------------------TATTCATTCATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179837738 214 - 180051392 AGACTCACACTCCCA-CACATGGTAT-TTCTT-CTCCTACACATTATTTGACGCTATCATGAAAAGAAAACCAGCAAGTGAAATCCAATCTGTCCGTAGAGAGTGGG---------AATT---------CTGTTCACTGTAAGTCATCCCTTCTCCTCTAATAGAGGCTAGCTGTACTTTGT-TTTTAGAATGGCCTAAATTATTTTTC--TAAGTA-C---ATGTTACA-----------------------------------------TATTCATTCACA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1308801 215 + 181584905 AGACTCACACTCCCA-CACATGGTAT-TTCTT-CTCCTACACATTATTTGATGCTATCATGAAAAGAAAACCAGCAAGTGAAATCCAATCTGTCCGTAGAGAGTGAG---------AATC---------CTGTTCACTCTAAGTCATCCTTTCTCCTCTAATAGAGGCTAGCTGTACTTTGT-TTTTAGAATGGCCTAAATTATTTTTC--TAAGTACC---AAGTTACG-----------------------------------------TATTTGTTCATG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 63601 214 + 100774 AGACTCACACTCCCA-CACATGGTAT-TTCTT-CTCCTACACATTATTTGACGCTATCATGAAAAGAAAACCAGCAAGTGAAATCCAATCTGTCCATAGAGAGTGGC---------AATT---------CTGTTCACTGTAAGTCATCCCTTCTCCTCTAATAGAGGCTAGCTGTACTTTGT-TTTTAGAATGGCCTAAATTATTTTTC--TAAGTA-C---ATGTTACA-----------------------------------------TATTCATTCACA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1399499 204 + 91010382 AGACTCACACTCCCA-CACACGGTAT-TTCTT-CTCCTACACATTATTTGACGCTATCATGAAAAGAAAACCAGCAAGTGAAACCCAA--TGTCCGTAGAG--TGGG---------AATC---------CTGTTCACTGTAAGTCATCCCTTCTCCTCTAATAGAGGCTAGCTGTACTTTGT-TTTTAGAATGGCCTAAATTATTTTT---------CC---ATGTTACA-----------------------------------------TATTCATTCACA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 59877 215 + 74206 AGACTCACACTCCCA-CACACGGTAT-TTCTT-CTCCTACACATTATTTGACGCTATCATGAAAAGAAAACCAGCAAGTGAAATCCAATCTGTCCATAGAGGATGGG---------AATT---------CTGTTCACTATAAGTCATCCCTTCTCCTCTAATAGAGGCTAGCTGTACTTTGT-TTTTAGAATGGCCTAAATTATATTTC--TAAGTACC---ATGTTACA-----------------------------------------TATTCATTCACA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 794176 214 - 1687011 AGACTCACACTCCCA-CACATGGTAT-TTGTT-CTCCTACACATTATTTGACGCTACCATGAAAAGAAAACCAGCAAGTGAAATCCAATCTGTCCGTAGAGGGTGGG---------AATC---------CTGTTTACTGTAAGTCGTCCCCTCTCCTCTAATAGAGGCCAGCTGTACTTTGT-TTTCAGAATGGCCTAAAGT-TTTTTC--TAAGTACC---AAGTTACA-----------------------------------------TATTCGTTCACG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204159444 214 + 204313951 AGACCCACACTGCAG-CACATGGTAT-TTCTT-CTCCTGCACACTACTCTGTGCTATCATGAAAAGAAAACCACCAAGTGAAATCCA--CTGTCACCGGAGGG-GAG---------AATC---------CGGTTCGCTTTAAGTCATCCCTTCTCTTCTAAT-GAGATTAGTTGCACTTTGT-TTTTAGAAGGGCCTAAATTATTTTTC--TAAGTACCAAGAAGTTACA-----------------------------------------TATTCATTCATG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16301559 216 + 16417988 AGACTCAAGCTCCAG-CACATGGTAA-TTCTT-CTTCTGCACACTATTCTATGCTATCATGAAAAGAAAACCAGCGAGCGAAATCCA--CTGTCACTGGAGGGTGGG---------AATC---------CTGTTCACTTTAAGTCATCCCTTATCCTCTAATAGAGATTAGTTGCACTTTGT-TTTTAGAAGGGCCTAAATTATTTTTC--TAAGTACCGAGAACTTACA-----------------------------------------TATTCATTCATG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 88665 216 - 306014 AGACTCACGCTCCAG-CACATGGTAT-TTCTT-CTCCTGCACACTATTCTATGCTATCATGGAAAGAAAACCACCGAGTGAAATCCA--CTGTCACTGGAGGGTGAG---------AATC---------CCATTTGCTTTAAGTCATTCCTTCTCCTCTAATAGAGATTAGTTGCACTTTGC-TTTTAGAAGGGCCTAAATTATTTTTC--TAAGTACTGAGAAGTTACA-----------------------------------------TATTCATTCATG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 132394 213 - 211231 AGACTCACGCTCCAG-CACACGGTAT-TTCTT-CTCCTGCACACTATTCTATGCTATCACGAAAAGAAAACCACCAAGTGAAATCCA----GTCACTGGAGGG-GGG---------AATC---------CTGTTCGCTTTCAGTCATCCCTTCTCCTCTAATAGAGATTAGTTGCACTTTGT-TTTTAGAAGGGCCTAAATTATTTTTC--TAAGTACCGAGAAGTTATA-----------------------------------------TATTCATTAATG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2119631 222 - 2165740 GGACTCAGACTTTGAGAACATGGCAC-TTTTT-CTCCTATACATTATTTTAAGCTACCCCAAGAAGAAAACCACTGACCAAAACCCATTGTATCACT-GATGATGGG---------AACCAACATCCAATCTTTTATTTT--GTTATCCCTTTTCCTTTATTAAAGATTAATTATACT---T-TTTTAGAGTGGCCTAAATTATTTTTC--TAAGTACCAAGAAGTTATA-----------------------------------------TAGTCATTTATG i otoGar3.GL873745 I 2 C 0 s mm10.chr13 74330154 191 + 120421639 AAACT-ACACTCCAA-CACAAGGTACATTTTT-CTTTTACA----GTTTTAAGCTACCAT---AAGAAAACC-TCAACTGAAATTCTTTCTATCCCTGTGGGGTAGG---------A------------CTAT---------GTCA----TTCTTTTATAAATGGAATT--CTAAATCTTGT-TTTTAAAACAGTCTAAAATTTTTCTA--CAATTACCAAGAAGTTACA-----------------------------------------GATTCATTTTT- i mm10.chr13 I 2 C 0 s canFam3.chr34 11947853 263 + 42124431 GGATTCACACTTCCAGCACAGAGTGT-TTTTT-CCTCAGCAAATTATTTTAAGTTGCCAGAAGAACAGAATCACAGACTGAAATCCACTGTATCACGGAAGGGAGGGCTATGACCCAATG---------CTCTGTTTTGTGTGCATTATGTTCTCCTTTAACAGA--TTATTTATATT---T-TTTAAGAA---CCTAAATTACTTTTCCATAAATATTGAGAACTTATATATATTCACACCTACTTTTTTtttttttttaagattttatttatttattcatg i canFam3.chr34 I 1 I 147 s dasNov3.JH577625 361004 198 - 913073 GGACTCACGCTTTCAGCA---GATAT-TTTTTACTCTTGCAGGTTATTTAA-GCTACC---AGAAGAAAATCAAC---TGACAGCCATTCTATCCCTGCAGGGATAA---------GCTA---------TCATTTA------------CCCTTTCC----ATAAAAAATAATTATATTTTGTGTTTTAGAAAAGTTTAAACATATTTTC--TATATGCATGAAGTTCACTTAT--------------------------------------TATTCATTTACA i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=1016575.000000 s hg38.chr3_KI270934v1_alt 118300 89 + 163458 CCAACTATTTTAAATATTTCATTGCAAATAAGTGATTTTTATCAGGCAAGTAATACGTAATGAACTTC-------------CCCTAAAAATAACAGCTTCCT s panTro5.chr3 2588810 88 - 202621043 CCAACTATTTTAAATATTTCATTGCAAATAAGTGATTTTTATC-GGCAAGTAATACATAATGAACTTC-------------CCCTAAAAATAACAGCTTCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 176050 89 - 190779 CCAACTATTTTAAATATTTCATTGCAAATAAGTGATTTTTATCAGGCAAGTAATACGTAATGAACTTC-------------CCCTAAAAATAACAGCTTCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 10910 86 + 880730 CCAACTATTTTAAATATTTCATTGCAAATAAGTGATTTTTATC-AGCAAGTAATACGTAATGAACTTC-------------CCCTAAAAATA--AGCTTCCT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2900505 89 - 123690457 CCAACTATTTTAAATATTTCATTGCAAATAAGTGATTTTTATCAGGCAAGTAATATGTAATGAAATTC-------------CCCTACAAATAACAACTTCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179837952 89 - 180051392 CCAACTATTTAAAAAATTTCATTGCAAATAAGTGATTTTTATCAGGCAAGTAATATGTAATGAACTTC-------------CCCTAAAAATAACAACTTCCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1309016 89 + 181584905 ACAACTATTTAAAAAATTTCATTGCAAATAAGTGATTTTTATCAGGCAAGTAATATTTAATGAACTTC-------------CCCTAAAAATAACAACTTCCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 63815 89 + 100774 TCAACTATTTAAAAAATTTCATTGCAAATAAGTGATTTTTATCAGGCAAGTAATATGTAATGAACTTC-------------CCCTAAAAATAACAACTTCCT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1399703 89 + 91010382 CCAACTATTTAAAAAATTTCATTGCAAATAAGTGATTTTTATCAGGCAAGTAATATGTAATGAACTTC-------------CCCTAAAAATAACAACTTCCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 60092 89 + 74206 CCAACTATTTAAAAAATTTCATTGCAAATAAGTGATTTTTATCAGGCAAGTAATATGTAATGAACTTC-------------CTCTAAAAATAACAACTTCCT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 794390 89 - 1687011 CCAACTATTTAAAAAATTTCATTGCAAATAAGTGATTTTTATCAGGCAAGTAATATGTAATGAACTTC-------------CCCTAAAAATAACAACTTCCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204159658 89 + 204313951 CCAACTACTTAAAATATTTCATTGCAAACAAGTGCTTTTTATCAAGCAAGTAACATGTAATGAACTTC-------------CCCTAAAAATAGCAATTTCCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16301775 88 + 16417988 CCAATTACTTAAAATATTTCATTGCAAAC-AGTGCTTTTTATCAGGCAAGTAATATGTAATGAACTTC-------------CCCTAAAAATAACAACTTCCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 88881 89 - 306014 CCAACTACTTAAAATATTTCATTGCAAACAAGTGCTTTTTATCAGGCAAGTAATATGTAATGAACTTC-------------CCCTAAAAATAATAACTTCCT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 132607 89 - 211231 CCAACTATTTAAAATATTTCATTGCAAACGAGTGCTTTTTATCAGGCAAGTAATATGTAATGAACTTC-------------CCCTAAAAATAACAACTTCCT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2119853 102 - 2165740 CATACTATTTAAAATATTTCATTGCAAGTAAGTAATTTATTTCAGGAAAGTAATATGCAATAAACTTTGAAGGGAAGTTTACCTTCAAAATAACAATTTCCT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74330345 81 + 120421639 ---ACTATT---AATATTGGACTGCAAACA--TAATTTATAACAGACAAATAATATGTAATCAACTTT-------------CCCTCAAAATACCAATTTCTt i mm10.chr13 C 0 I 813 s canFam3.chr34 11948263 84 + 42124431 CCTACTCTTTAAAATATTTCATAGCAAGTAAATAATTTATACTGAGCAAGCACTGTGTGATAAACTTC-------------TCCTCAAAACAA----TTCC- i canFam3.chr34 I 147 C 0 s dasNov3.JH577625 361202 80 - 913073 CCTACAGTTTAAAATATTTCA---------AGTAATTTATATCAGACAAATAATATATAATAAACTTC-------------CCCTCAAAATAACAATGTCCA i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=37769.000000 s hg38.chr3_KI270934v1_alt 118389 4 + 163458 AATA s panTro5.chr3 2588898 4 - 202621043 AATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 176139 4 - 190779 AATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 10996 4 + 880730 AATA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2900594 4 - 123690457 AATA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179838041 4 - 180051392 AATA i rheMac8.chr6 C 0 I 317 s macFas5.chr6 1309105 4 + 181584905 ATTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 63904 4 + 100774 AATA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1399792 4 + 91010382 AATA i chlSab2.chr4 C 0 I 313 s manLeu1.NW_012101728v1 60181 4 + 74206 AATA i manLeu1.NW_012101728v1 C 0 I 314 s colAng1.NW_012116910v1 794479 4 - 1687011 AATA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204159747 4 + 204313951 AATA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16301863 4 + 16417988 AATA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 88970 4 - 306014 AATA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 132696 3 - 211231 AAT- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2119955 4 - 2165740 AATA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11948347 4 + 42124431 CATA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 361282 4 - 913073 AGTA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74330426 813 + 120421639 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=755704.000000 s hg38.chr3_KI270934v1_alt 118393 93 + 163458 GTGC-TTTTTCTAAACAGAAAATAATGACTGCAA--AATAA-T--TTAAAAAAAAAAAATGTAACCCCAAAAATGT--CACCTTA--ACTGTTAAGATCCCCA s panTro5.chr3 2588902 93 - 202621043 GTGC-TTTTTCTAAGCAGAAAATAATGACTGCAA--AATAA-T--TAAAAAAACAAAAATGTAACCCCAAAAATGT--CACCTTA--ACTGTTAAGATCCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 176143 93 - 190779 GTGC-TTTTACTAAGCAGAAAATAATGACTGCAA--AATAA-T--TAAAAAAACAAAAATGTAACCCCAAAAATGT--CACCTTA--ACTGTTAAGATCCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 11000 93 + 880730 GTGC-TTTTTCTAAGCAGAAAATAATGACTGCAA--AATAA-T--TAAAAAAAAAAACATGTGACCCCAAAAATGT--CACCTTA--ACTGTTAAGATCCCCA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2900598 92 - 123690457 GTGC-TTTTTCTAAGCAGAAAATAATGACCGCAA--AATAA-T--TAAAAAAAAAAAAA-GTAACCCCAAAAATGT--CACCTTA--ACTGTTAAGATCCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179838362 92 - 180051392 GTGC-TTTTTCTAAGCAGAACATAATGACTACAA--AATAA-T--TTAAAAAAAAAAAC-GTAACCCCAAAAATGT--CACCTTA--ACTGTTAAGATCCCCA i rheMac8.chr6 I 317 C 0 s macFas5.chr6 1309109 92 + 181584905 GTGC-GTTTTCTAAGCAGAACATAATGACTACAA--AATAA-T--TAAAAAAAAAAAAA-GTAACCCCAAAAATGT--CACCTTA--ACTGTTAAGATCCCCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 63908 91 + 100774 GTGC-GTTTTCTAAGCAGAACATAATGACTACAA--AATAA-T--T-AAAAAAAAAAAA-GTAACCCCAAAAATGT--CACCTTA--ACTGTTAAGATCCCCA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1400109 91 + 91010382 GTGC-TTTTTCTAAGCAGAACATAATGACTACAA--AATAA----TTTAAAAAAAAAAA-GTAACCCCAAAAATGT--CACCTTA--ACTGTTAAGATCCCCA i chlSab2.chr4 I 313 C 0 s manLeu1.NW_012101728v1 60499 92 + 74206 GTGC-TTTTTCTAAGCAGAACATAATGACTACAA--AATAA-T--TTTTTAAAAAAAAT-GTAACCCCAAAAATGT--CATCTTA--ATTGTTAAGATCCCCA i manLeu1.NW_012101728v1 I 314 C 0 s colAng1.NW_012116910v1 794483 87 - 1687011 GTGC-TTTTTCTAAGCAGAAC---ATGACTGCAA--AATAA-T--TTTTTAAAAAAA---GAAACCCCAAAAATGT--CACCTTA--ACTGTTAAGATCCCCA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204159751 90 + 204313951 GTGC-TTTTTCTAAGCAGAACATAATGACTGCAA--AATAATT--TTTTTAAAAAT----GTAACCCCAAAAATGT--CACCTTA--ATAGTTAAGATCCCCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16301867 84 + 16417988 GTGC-T-----TAAGCAGAACATAATGACTGCAA--AATAA-T--TTTTTAAAAAT----GTAACCCCCAAAAAAT--CACCTTA--ATAGTTAAGATTCCCA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 88974 89 - 306014 GTGC-TTTTTCTAAGCAGAACATAATGACTGCAA--AATAA-T--TTTTTAAAAAT----GTAACCCCCAAAATGT--CACCTTA--ATAGTTAAGATCCCCA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 132699 91 - 211231 GTGCGTTTTTCTAAGCAGAACATAATGACTGCAA--AATAATT--TTTAAAAAAAT----GTAACCCCCAAAATGT--CACCTTA--ATAGTTAAGATCCCCA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2119959 90 - 2165740 ACGT-CTTTTCTAAGCAGAACACAATATT-------AATAA-C--TAGAAGAAACAAAATGTGACCCCCAGTATTTACCTTTTTA--ACTGTTAGGACCCCTG i otoGar3.GL873745 C 0 I 229 s canFam3.chr34 11948351 87 + 42124431 GTGA-CTTTTCTAAGGAGAACATAATAACTGCAA--AACAA-TACCTGACCAAAACTAG-GTTACCCT-------C--TACATAA--ACTGTTAGGACCCACA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 361286 82 - 913073 GTGA-CTTTTCCAAGCAGAACACAGC-ACTGCAAAGAACAG-G--T--------------ATGACCAAAGAAACTT--TACCTTCTTACCTACAAGACCCCCG i dasNov3.JH577625 C 0 I 10 e mm10.chr13 74330426 813 + 120421639 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=593733.000000 s hg38.chr3_KI270934v1_alt 118486 67 + 163458 ACCAGCCTCTATCTAGTCTCAACATTACCACCATATAATCTCTGGATTTCTCAGTTTAATCACTTCT s panTro5.chr3 2588995 67 - 202621043 ACCAGCCTCTATCTAGTCTCAACATTACCACCATATAATCTCTGGATTTCTCAGTTTAATCACTTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 176236 67 - 190779 ACCAGCCTCTATCTAGTCTCAACATTACCACCATATAATCTCTGGATTTCTCAGTTTAATCACTTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 11093 67 + 880730 ACCAGCCTCTATCTAGTCTCAATATTACCACCATATAATCTCTGGATTTCTCAGTTTAATCACTTCT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2900690 67 - 123690457 ACCAGCCTCTATCTAGTCTCAACATGGCCACCATATAATCTCTGGATTTCTCAGTTTAATCACTTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179838454 67 - 180051392 ACCAGCCTCTATCTAGTCTCAACATTACCACCATATAACCTCCGGATTTCTCAGTTTAATCACTTCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1309201 67 + 181584905 ACCAGCCTCTATCTAGTCTCAACATTACCACCATATAACCTCCGGATTTCTCAGTTTAATCACTTCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 63999 67 + 100774 ACCAGCCTCTATCTAGTCTCAACATTACCACCATATAACCTCCGGATTTCTCAGTTTAATCACTTCT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1400200 67 + 91010382 ACCAGCCTCTATCTAGTCTCAACATTACCACCATATAACCTCCGGATTTCTCAGTTTAATCACTTCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 60591 67 + 74206 ACCAGCCTCTATCTAGTCTCAACATTACCACCATATAACCTCCGGATTTCTCAGTTTAATCACTTCT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 794570 67 - 1687011 ACCAGCCTCTATCTAGTCTCAACATTACCACCATATAACCTCCGGATTTCTCAGTTTAATCACTTCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204159841 67 + 204313951 ACCAGCCTCTATCTGGTGTCAACATTACCACCAGACAATCTCTAGATTTCTCAGTATCATCACTTCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16301951 67 + 16417988 ACCAGCCCCTATCTGGTATCAGCATTACCACCAGATAATCTCTAGATTTCTCAGTATAATCACTTCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 89063 67 - 306014 ACCAGCCTCTATCTGGTGCTAACATTACCACCAGATAATCTCCAGACTTCTCAGTATAATCACTTCT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 132790 48 - 211231 AGCAGCCTCTATCTGGTGTC-------------------CCCTAGATTTCTCAGTTTAATGACTTCT i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 11948438 60 + 42124431 CCTAGCCTGTGTCGAGTCCCAAGTCTATTACTGTAGAA-------ATCTCTTTCTTTTCTCTCTCtt i canFam3.chr34 C 0 I 188 s dasNov3.JH577625 361378 63 - 913073 ACCA-CCCATGTCTAGT---AACTCTACCACTAGAGAATCTCTGGACCTCACTGTTTCCTTGCTTCT i dasNov3.JH577625 I 10 C 0 e mm10.chr13 74330426 813 + 120421639 I e otoGar3.GL873745 2120049 229 - 2165740 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=561260.000000 s hg38.chr3_KI270934v1_alt 118553 61 + 163458 AGGGGAAAAAAC----CCAGACTACCTCTATATGCTCACTACGCAAATTTCCAGTAAGAAATCAA s panTro5.chr3 2589062 61 - 202621043 AGGGGAAAAAAC----CCAGACTACCTCTATATGCTCACTAAGCAAATTTCCAGTAAGAAATCAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 176303 61 - 190779 AGGGGAAAAAAC----CCAGACTACCTCTATATGCTCACTAAGCAAATTTCCAGTAAGAAATCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 11160 61 + 880730 AGGGGAAAAAAC----CCAGACTACCTCTATATGATCACTAAGCAAATTTCCAGTAACAAATCAA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2900757 60 - 123690457 -GGGGAAAAAAC----CCAGACTACCTCTATATGATCACTAAGCCAATTTCCAGTAACAAATCAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179838521 61 - 180051392 AGGGGAAAAAAC----CCAGACTACCTCTATATGACCACTAAGCAAATTTCCAGTAACAAATCGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1309268 61 + 181584905 AGGGGAAAAAAC----CCAGACTACCTCTATATGACCACTAAGCAAATTTCCAGTAACAAATCGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64066 61 + 100774 AGGGGAAAAAAC----CCAGACTACCTCTATATGACCACTAAGCAAATTTCCAGTAACAAATCGA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1400267 61 + 91010382 AGGGGAAAAAAC----CCAGACTACCTCTATATGACCACTAAGCAAATTTCCAGTAACAAATCGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 60658 61 + 74206 AGGGGAAAAAAC----CCAGACTACCTCTATATGACCACTAAGCAAATTTCCAGTAACAAATCGA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 794637 61 - 1687011 AGGGGAAAAAAC----CCAGACTACCTCTATATGACCACTAAGCAAATTTCCAGCAACAAATTGA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204159908 61 + 204313951 AGGGGAAAAAAC----CCAGACGACCACTATATGATCACTAAGCAAATTTCCAGGAAGAAATCAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16302018 60 + 16417988 AGGAGAAAAAAA----CCAGACTACTTCTATATGATCACTAAGCAAATTTCCA-GAAGAAATCAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 89130 60 - 306014 AGGGGAAAAAAC----CCAGACTACTTCTATATGATCACTAAGCAAGTTTCCA-GAAGAAATCAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 132838 61 - 211231 AGGGGAAGAAAC----CCAGACTACCTCTATATGATCACTAAGCAAATTTCCAGGAAGAAATCAA i aotNan1.NW_018494784v1 C 0 C 0 s dasNov3.JH577625 361441 65 - 913073 AGGGGAAAAAAAAGAGTCAGAATACAACCAAATGATGACTAAGCACATTTCCAGTTAAAAATCAA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74330426 813 + 120421639 I e canFam3.chr34 11948498 188 + 42124431 I e otoGar3.GL873745 2120049 229 - 2165740 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=568500.000000 s hg38.chr3_KI270934v1_alt 118614 71 + 163458 GGCTTTGTAACCTggctgggtgcagtggctcatgcctgtaatcccaatactttggaaagctgaggcagaa-g- s panTro5.chr3 2589123 71 - 202621043 GGCTTTGTAACCTggctgggtgcagtggctcatgcctgtaatcccaatactttgggaagctgaggcagaa-g- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 176364 71 - 190779 GGCTTTGTAACCTggctgggtgcagtggctcatgcctgtaatcccaatactttgggaagctgaggcagaa-g- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 11221 72 + 880730 GGCTTTGTAACCTggctgggtgcagtggctcatgcctgtaatcccaatactttgggaagctgaggcagaagg- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2900817 72 - 123690457 GGCTTTGTAACCTggctgggtgcagtggctcatgcctgtaatcccaatagtttgggaagctgaggcagaagg- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179838582 71 - 180051392 GGCTTTGTAACCTggctgggtgccgtggctcatgtctgtaatcccagtactttgggaagctgaggcagaa-g- i rheMac8.chr6 C 0 I 1613 s macFas5.chr6 1309329 71 + 181584905 GGCTTTGTAACCTggctgggtgccgtggctcatgtctgtaatcccagtactttgggaagctgaggcagaa-g- i macFas5.chr6 C 0 I 1 s macNem1.NW_012013899v1 64127 71 + 100774 GGCTTTGTAACCTggctgggtgccgtggctcatgtctgtaatcccagtactttgggaagctgaggcagaa-g- i macNem1.NW_012013899v1 C 0 I 1 s chlSab2.chr4 1400328 71 + 91010382 GGCTTTGTAACCTggctgggtgccgtggctcatgtctgtaatcccagtactttgggaagctgaggcagaa-g- i chlSab2.chr4 C 0 I 1 s manLeu1.NW_012101728v1 60719 71 + 74206 GGCTTTGTAATCTggctgggggtcgtggctcatgtctgtaatcccaatactttgggaagctgaggcagaa-g- i manLeu1.NW_012101728v1 C 0 I 1 s colAng1.NW_012116910v1 794698 60 - 1687011 GGTTTTGTGACCCggctgggtgcagtggctcatgtctgtaatcccagtacttt---------aggcagg---- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204159969 72 + 204313951 GGCTTTGTAACCTggctgggggtgggggctcatgcctgtaatcccaacactctgggaagctgagagagaa-gg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16302078 72 + 16417988 GGCTTTGTAACCTggctgggtgcagtggctcaagcctgtaatcctaacactttgggaaactgaggcagaa-gg i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 89190 72 - 306014 GGCTTTGTAACCTggctgggtgcagtggctcaggcctgtaatcccaacactttgggaaactgaggcagaa-gg i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 132899 71 - 211231 GGCTTTGTAACCTggctgggtgcagtggctcatccctgtaatcccaatactttgggaagctgagacag-a-gg i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74330426 813 + 120421639 I e dasNov3.JH577625 361506 0 - 913073 C e canFam3.chr34 11948498 188 + 42124431 I e otoGar3.GL873745 2120049 229 - 2165740 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=505201.000000 s hg38.chr3_KI270934v1_alt 118685 60 + 163458 actgtttgagtctaggagttcaagaccagcctgggcaatattgtgagaccctgtctct----ac s panTro5.chr3 2589194 60 - 202621043 actgtttgagtctaggagttcaagaccagcctgggcaatattgtgagaccctgtctct----ac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 176435 60 - 190779 actgtttgagtctaggagttcaagaccagcctgggcaatattgtgagaccctgtctct----ac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 11293 60 + 880730 actgtttcagtctaggagttcaagaccagcctgggcaatactgtgagaccctgtctct----ac i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2900889 60 - 123690457 actgtttgagtctaggagttcaagaccagcctgggcaatattgtgagaccctgtctct----ac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179840266 60 - 180051392 actgcttgggtctaggagttcaagaccagcctgggcaatattgtgagaccctgtttct----ac i rheMac8.chr6 I 1613 C 0 s macFas5.chr6 1309401 60 + 181584905 actgcttgggtctaggagttcaagaccagcctgggcaatattgtgagaccctgtttct----ac i macFas5.chr6 I 1 C 0 s macNem1.NW_012013899v1 64199 60 + 100774 actgcttgggtctaggagttcaagaccagcctgggcaatattgtgagaccctgtttct----ac i macNem1.NW_012013899v1 I 1 C 0 s chlSab2.chr4 1400400 62 + 91010382 actgcttgggtctaggagttcaagaccagcctgggcaatattgtgagaccctgtctct--aaca i chlSab2.chr4 I 1 C 0 s manLeu1.NW_012101728v1 60791 64 + 74206 actgcttgggtctaggagttcaagaccagcctgggcaatattgtgagaccctgtctctacaaaa i manLeu1.NW_012101728v1 I 1 C 0 s colAng1.NW_012116910v1 794758 58 - 1687011 actgtttgggtct---agttcaagaccagcctgggcaatattgtgagaccctgtctct---aca i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160041 60 + 204313951 actgtttcagtctaggagttccagatcagcctgggcaacattgtgagaccctgtctct----gc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16302150 60 + 16417988 actgtttcagtctaggagttccagatcagcctgggcaacattgtgagaccctgtctct----ac i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 89262 60 - 306014 actgtttcagtctaggagttccagatcagcctgggcaacattgtgagaccctgtctct----ac i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 132970 60 - 211231 actgtttcagtctaggagttccagatcagcctgggtaacattgtgagaccctgtctct----ac i aotNan1.NW_018494784v1 C 0 I 27 e mm10.chr13 74330426 813 + 120421639 I e dasNov3.JH577625 361506 0 - 913073 C e canFam3.chr34 11948498 188 + 42124431 I e otoGar3.GL873745 2120049 229 - 2165740 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=-4906.000000 s hg38.chr3_KI270934v1_alt 118745 7 + 163458 caa-----------aaaa s panTro5.chr3 2589254 7 - 202621043 caa-----------aaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 176495 6 - 190779 c-a-----------aaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 11353 6 + 880730 a-a-----------aaat i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2900949 7 - 123690457 aaa-----------aaaa i nomLeu3.chr11 C 0 I 4012 s rheMac8.chr6 179840326 6 - 180051392 aaa-----------aaa- i rheMac8.chr6 C 0 I 2 s macFas5.chr6 1309461 6 + 181584905 aaa-----------aaa- i macFas5.chr6 C 0 I 2 s macNem1.NW_012013899v1 64259 6 + 100774 aaa-----------aaa- i macNem1.NW_012013899v1 C 0 I 2 s chlSab2.chr4 1400462 6 + 91010382 aaa-----------aaa- i chlSab2.chr4 C 0 I 2 s manLeu1.NW_012101728v1 60855 6 + 74206 aaa-----------aaa- i manLeu1.NW_012101728v1 C 0 I 2 s colAng1.NW_012116910v1 794816 6 - 1687011 aaa-----------aaa- i colAng1.NW_012116910v1 C 0 I 2 s calJac3.chr2 204160101 6 + 204313951 aaa-----------aaa- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16302210 13 + 16417988 aaaaaaaatt----aaa- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 89322 17 - 306014 aaaaaaaatttaaaaaa- i cebCap1.NW_016108150v1 C 0 C 0 e mm10.chr13 74330426 813 + 120421639 I e aotNan1.NW_018494784v1 133030 27 - 211231 I e dasNov3.JH577625 361506 0 - 913073 C e canFam3.chr34 11948498 188 + 42124431 I e otoGar3.GL873745 2120049 229 - 2165740 I e cerAty1.NW_012004452v1 21373 66 - 218577 I a score=17862.000000 s hg38.chr3_KI270934v1_alt 118752 12 + 163458 aatttttttaaa--------- s panTro5.chr3 2589261 12 - 202621043 attttttttaaa--------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 176501 12 - 190779 attttttttaaa--------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 11359 12 + 880730 tttttttttaaa--------- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179840334 12 - 180051392 tttttttttaaa--------- i rheMac8.chr6 I 2 C 0 s macFas5.chr6 1309469 12 + 181584905 tttttttttaaa--------- i macFas5.chr6 I 2 C 0 s macNem1.NW_012013899v1 64267 12 + 100774 tttttttttaaa--------- i macNem1.NW_012013899v1 I 2 C 0 s chlSab2.chr4 1400470 12 + 91010382 aatttttttaaa--------- i chlSab2.chr4 I 2 C 0 s manLeu1.NW_012101728v1 60863 12 + 74206 aatttttttaaa--------- i manLeu1.NW_012101728v1 I 2 C 0 s colAng1.NW_012116910v1 794824 12 - 1687011 aactttttaaaa--------- i colAng1.NW_012116910v1 I 2 C 0 s calJac3.chr2 204160107 12 + 204313951 ---------aaaaataaaaaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16302223 12 + 16417988 ---------aaaaaaaaaaaa i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 89339 12 - 306014 ---------aaacaaacaaaa i cebCap1.NW_016108150v1 C 0 C 0 e mm10.chr13 74330426 813 + 120421639 I e aotNan1.NW_018494784v1 133030 27 - 211231 I e dasNov3.JH577625 361506 0 - 913073 C e canFam3.chr34 11948498 188 + 42124431 I e otoGar3.GL873745 2120049 229 - 2165740 I e cerAty1.NW_012004452v1 21373 66 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=785639.000000 s hg38.chr3_KI270934v1_alt 118764 101 + 163458 ttagccaggtgtggtggtgcacatctgtagtcccagctacttgggactctgaaggttgaggtgttgaggactgcttgagctcgggaggttgaggctgctat s panTro5.chr3 2589273 101 - 202621043 ttagccaggtgtggtggtgcacatctgtagtcccagctacttgggactctgaaggttgaggtgttgaggactgcttgagctcgggaggttgaggctgctat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 176513 101 - 190779 ttagccaggtgtggtggtgcacatctgtagtcccagctacttgggactctgaaggttgaggtgttgaggactgcttgagctcgggaggttgaggctgctat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 11371 101 + 880730 ttagccaggtgtggtggtgcacatctgtagtcccagctacttgggactctgaaggttgaggtgctgaggactgcttgagctcgggaggttgaggctgctat i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179840346 101 - 180051392 ttagccaggtgtggtggtgcacatctgtagtcccagctacttgggactctgcaggtggaggtgttgaggactgctcgagcccgggaggttgaggcagctat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1309481 101 + 181584905 ttagccaggtgtggtggtgcacatctgtagtcccagctacttgggactctgcaggtggaggtgttgaggactgctcgagcccgggaggttgaggcggctat i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64279 101 + 100774 ttagccaggtgtggtggtgcacatctgtagtcccagctacttgggactctgcaggtggaggtgttgaggactgctcaagcccgggaggttgaggcggctat i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1400482 101 + 91010382 ttagccaggtgtggtggtgcacatctgtagtcccagctacttgggactctgtaggtggaggtgttgaggactgctcgagcctgggaggttgaggcggctat i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 60875 101 + 74206 ttagccaggtatggtggtgcacatctgtagtcccagctacttgggactctgcaggtggaggtgttgaggactgctcgagcccgggaggttgaggcggctat i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 794836 101 - 1687011 ttagccaggtgtggtggtgcacatctgtagtcccagctacttgggactctacaggtggaggtgttgaggactgctcgagcccgggaggttgaggcggctat i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160119 101 + 204313951 gtagccaggtgtgggggtgcacacctgtagttccagctacttgggactctgaaggttggggtgttaaggactgcttgagcccaggaggctgaggctgccat i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16302235 101 + 16417988 ttaaccaggtgtggtggtgcacacctgtagtcccagctacttgggactctgaaggttgaggtgttaaggactgcttgagcccaggaggctgaggctgccat i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 89351 101 - 306014 ttagccaggtgtgggggtgcacacctgcagtcccagctacttgggaatctgaaggttgaggtgttaaggactgcttgagcccaggaggctgaggctgccat i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133057 101 - 211231 ttagccaggtgtggtggtgcacgcctgtagtcccagctacttgggactctgaagattgaggtgctaaggactgcttgagcccaggaggctgaggctgccat i aotNan1.NW_018494784v1 I 27 C 0 e mm10.chr13 74330426 813 + 120421639 I e dasNov3.JH577625 361506 0 - 913073 C e canFam3.chr34 11948498 188 + 42124431 I e otoGar3.GL873745 2120049 229 - 2165740 I e cerAty1.NW_012004452v1 21373 66 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=232771.000000 s hg38.chr3_KI270934v1_alt 118865 29 + 163458 gactgtgccactgcactccagcctgggct s panTro5.chr3 2589374 29 - 202621043 gactgtgccactgcactccagcctgggct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 176614 29 - 190779 gactgtgccactgcactccagcctgggct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 11472 29 + 880730 gactgtgccactgcactccagcctgggct i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179840447 29 - 180051392 gactgtgccacggcactccagcctgggct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1309582 29 + 181584905 gactgtgccatggcactccagcctgggct i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64380 29 + 100774 gactgtgccatggcactccagcctgggct i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1400583 29 + 91010382 gactgtgccacggcactccagcctgggct i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 60976 29 + 74206 gactgtgccacggcactccagcctgggct i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 794937 29 - 1687011 gactgtgccatggcactccagcctgggct i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160220 29 + 204313951 gactgtgccactgcactccagcctgggct i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16302336 29 + 16417988 gactgtgccactgcactccagcctgggct i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 89452 29 - 306014 tactgtgccactgcactccagcctgggct i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133158 29 - 211231 gactgtgccactgcattccagcctgggct i aotNan1.NW_018494784v1 C 0 C 0 s dasNov3.JH577625 361506 12 - 913073 GACTTTGCAACT----------------- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74330426 813 + 120421639 I e canFam3.chr34 11948498 188 + 42124431 I e otoGar3.GL873745 2120049 229 - 2165740 I e cerAty1.NW_012004452v1 21373 66 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=82022.000000 s hg38.chr3_KI270934v1_alt 118894 17 + 163458 gaccctgtctcaaaaaa s panTro5.chr3 2589403 17 - 202621043 gaccctgtctcaaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 176643 16 - 190779 gaccctgtctc-aaaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 11501 17 + 880730 gaccctgtctcaaaaaa i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179840476 15 - 180051392 ga-cctgtctc-aaaag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1309611 15 + 181584905 ga-cctgtctc-aaaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64409 15 + 100774 ga-cctgtctc-aaaaa i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1400612 15 + 91010382 ga-cctgtctc-aaaaa i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61005 15 + 74206 ga-cctgtctc-aaaaa i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 794966 15 - 1687011 ga-cctgtctc-aaaaa i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160249 17 + 204313951 gaccctgtctcaaaaaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16302365 17 + 16417988 gaccctgtctcaaaaaa i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 89481 17 - 306014 gacccagtctttaaaaa i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133187 17 - 211231 gaccctgtctcaaaaaa i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 11948686 15 + 42124431 --GGCAATTTCCAATTA i canFam3.chr34 I 188 I 2 s dasNov3.JH577625 361518 15 - 913073 --TCCTGCCTTCAGAAA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74330426 813 + 120421639 I e otoGar3.GL873745 2120049 229 - 2165740 I e cerAty1.NW_012004452v1 21373 66 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=30512.000000 s hg38.chr3_KI270934v1_alt 118911 14 + 163458 aaagaaaaaa---------gaC----T s panTro5.chr3 2589420 14 - 202621043 aaagaaaaaa---------GAC----T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 176659 14 - 190779 aaagaaaaaa---------GAC----T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 11518 14 + 880730 aaagaaaaaa---------GAC----T i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179840491 16 - 180051392 aaagaaaaac---------aaC--TGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1309626 16 + 181584905 aaggaaaaaC---------GAC--TGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64424 16 + 100774 aaagaaaaac---------aaC--TGT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1400627 16 + 91010382 aaggaaaaac---------aaC--TGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61020 16 + 74206 aaagaaaaac---------aaC--TGT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 794981 16 - 1687011 aaagaaaaaC---------GAC--TGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160266 27 + 204313951 aaagaaaaaaagaCTTCATAACTTTGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16302382 18 + 16417988 aaaaaaaaaa---------GACTTTGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 89498 17 - 306014 aaaaaaaaa----------GACTTTGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133204 18 - 211231 aaaaaagaaa---------gaCTTTGT i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74331239 14 + 120421639 AACAAATAAA---------GAC--T-- i mm10.chr13 I 813 C 0 s canFam3.chr34 11948703 14 + 42124431 ----AATCAA---------GACATGGT i canFam3.chr34 I 2 C 0 s dasNov3.JH577625 361533 1 - 913073 --------------------A------ i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 2120049 229 - 2165740 I e cerAty1.NW_012004452v1 21373 66 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=2328612.000000 s hg38.chr3_KI270934v1_alt 118925 205 + 163458 AACCTCCTGC-GCCTTCTCAAATAGTCTGGGT-CCT-GAAGAAAACACTTACCAGGCCTGCACGACTCTGCGATGCTCAGGGCACATGCCTGACC--AGACAACCAGGTCCAACAGCGAGTTTGCCCCGAGGCGGTTGACACCATGTGCAGAGGCACAGGCGGCCTCCCCACAGGCGTACAGGCTGGGCACAATCTGATCCTGGCCATTC s panTro5.chr3 2589434 205 - 202621043 AACCTCCTGT-GCCTTCTCAAATAGTCTGGGT-CCT-GAAGAAAACACTTACCAGGCCTGCACGACTCTGCGATGCTCAGGGCACATGCCTGACC--AGACAACCAGGTCCAACAGCGAGTTTGCCCCGAGGCGGTTGACACCATGTGCCAAGGCACAGGCGGCCTCCCCACAGGCGTACAGGCCGGGCACAATCTGATCCTGGCCATTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 176673 205 - 190779 AACCTCCTGC-GCCTTCTCAAATAGTCTGGGT-CCT-GAAGAAAACACTTACCAGGCCTGCACGACTCTGCGATGCTCAGGGCACATGCCTGACC--AGACAACCAGGTCCAACAGCGAGTTTGCCCCGAGGCGGTTGACACCATGTGCCGAGGCACAGGCGGCCTCCCCACAGGCGTACAGGCCGGGCACAATCTGATCCTGGCCATTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 11532 205 + 880730 AACCTCCTGC-GCCTTCTCAAATAGTCTGGGT-CCT-GCAGAAAACACTTACCAGGGCTGCACGACTCTGCGATGCTCAGGGCACATGCCTGACC--AGACAACCAGGTCCAACAGTGAGTTTGCCCCGAGGCGGTTGACACCATGTACCGAGGCACAGGCGGCCTCCCCACAGGCGTACAGGCTGGGCACAATCTGATCCTGGCCATTC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179840507 207 - 180051392 AACCTCCCGC-GCCTTCTCGAACAGTCTGGCT-CCT-GAAGAAAACACTTACCAGGCCTGCACGACTCTTCGATGCTCAGGGCACATGCCCGACCAAAGACGACCAGGTCCAAGAGGGAGTTTGCCCCGAGCCGGTTGGCACCATGTACCGAGGCACAGGCGGCCTCCCCACAGGCGTACAGCCCGGGCACAATCTGATCCTGGCCATTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1309642 207 + 181584905 AACCTCCTGC-GCCTTCTCAGACAGTCTGGCT-CCT-GAAGAAAACACTTACCAGGCCTGCACGACTCTTCGATGCTCAGGGCACATGCCCGACCAAAGACGACCAGGTCCAAGAGGGAGTTTGCCCCGAGCCGGTTGGCACCATGTACCGAGGCACAGGCGGCCTCCCCACAGGCGTACAGCCCGGGCACAATCTGATCCTGGCCATTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64440 207 + 100774 AACCTCCTGC-GCCTTCTCGAACAGTCTGGCT-CCT-GAAGAAAACACTTACCAGGCCTGCACGACTCTTCGATGCTCAGGGCACATGCCCGACCAAAGACAACCAGGTCCAAGAGGGAGTTTGCCCCGAGCCGGTTGGCACCATGTACCGAGGCACAGGCGGCCTCCCCACAGGCGTACAGCCCGGGCACAATCTGATCCTGGCCATTC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1400643 207 + 91010382 AACCTCCTGC-GCCTTCTCAGACAGTCTGGCT-CCT-GAAGGAAACACTTACCAGGCCTGCATGACTCTTCGATGCTCAGGGCACATGCCCGACCAAAGACAACCAGGTCCAAGAGCGAGTTTGCCCCGAGCCGGTTGGCACCATGTACCGAGGCACAGGCGGCCTCCCCACAGGCGTATAGCCCGGGCACAATCTGATCCTGGCCATTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61036 207 + 74206 AACCTCCTGC-GCCTTCTCAGACAGTCTGGCT-CCT-GAAGAAAACACTTACCAGGGCTGCATGACTCTTCGATGCTCAGGGCACATGCCCGACCAAAGACAACCAGGTCCAAGAGCGAGTTTGCCCCGAGCCGGTTGGCACCATGTACCGAGGCACAGGCAGCCTCCCCACAGGCGTACAGCCCAGGCACAATCTGATCCTGGCCATTC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 794997 207 - 1687011 AACCTCCTGC-GCCTTCTCAAACAGTCTGGCT-CCT-GAAGAAAACACTTACCAGGCCTATATGACTCTTCGATGCTCAGGGCACATGCCCGACCAAAGACAACCAGGTCCGAGAGCAAGTTTGCCCCAAGCCGGTTGGCACCATGTACCAAGGCACAAGCGGCCTCCTCACAGGCGTACAGCCCGGGCACAATCTGATCCTGGCCATTC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160293 205 + 204313951 AACCTCCT---GCCTTCTCAAATGGTCTGGCT-TCT-GAAGAAAACACTCACCAGGCCTGCATGACTCTTCGATGCTCAGGGCACAGGCCCGGCCAAAGACAACCAGGTCCAAGAGCGAGTTTGCCCCGAGACGGTTGGCACCATGGACTGAGGCGCAGGCGGCCTCCCCACAGGCGTACAGGCCAGGCACGATCTGATCCTGGCCATTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16302400 205 + 16417988 AACCTCCT---GCCTTCTCAAATGGTCTGGCT-TCT-GAAGAAAACACTCACCAGGCCTGCATGACTCTTCGATGCTCAGGGCACAGGCCCGGCCAAAGACAACCAGGTCCAAGAGTGAGTTTGCCCCAAGGCGGTTGGCACCATGGACTGAGGCGCAGGCGGCCTCCCCACAGGCATACAGGCCGGGCACGATCTGATCCTGGCCATTC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 89515 205 - 306014 AACCTCCT---GCCTTCTCATATAGTCTGGCT-TCT-GAAGAAAACACTCACCAGGCCTGCATGACTCTTCGATGCTCAAGGCACAAGCCCGGCCAAAGACAACCAAGTCCAAGAGTGAGTTTGCCCCAAGACGGTTGGCACCATGGACTGAGGCGCAGGCAGCCTCCCCACAGGCATACAGGCCGGGCACAATCTGATCCTGGCCATTC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133222 205 - 211231 AACCTCCT---GCCTTCGCAAACAGTCTGGCT-TCT-GAAGAAAACACTCACCAGGCCTGCATGACTCTTCGATGCTCAGGGCACAGGCTCGGCCAAAGACAACCAGGTCCAAGAGCGAGTTTGCCCCGAGACGGTTGGCACCATGGACTGAGGCGCAGGCGGCCTCCCCACAGGCATACAGGCCGGGTACAATCTGATCCTGGCCATTC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2120278 205 - 2165740 AACCTCT----GCCCTCTGACACTGCCTAACTACTT-GAAGAAAACACGTACCAGGCCTGCAAGATTCTTCAATGCTCAGGGCACATGCTCGCCCAAAGACGACCAAGTCCAAGAGTGAATTTGCCCCAAGCCTGTTGGCGCCATGCACTGAGGCACAGGCAGCCTCCCCACAGGCATACAAGCCAGGCACGATCTGATCTTGCCCGTCC i otoGar3.GL873745 I 229 C 0 s mm10.chr13 74331253 203 + 120421639 ------ATGCAGGCTCCTAGAATGGCTTGAGA-GCTGGAAGAGAACACATACCAGGCCTGCAAGATTCTGCAATGCTCAGGGCACAGGCTCTGCCAAAGACTACAAGGTCCAAGAGAGAATTTGCTCCAAGCCGGTTGGCACCATGCACTGAGGCGCAGGCAGCCTCCCCACAGGCATACAGACCAGGCACAATCTGATCCTGGCCATTC i mm10.chr13 C 0 C 0 s canFam3.chr34 11948717 206 + 42124431 AACCTCTC---ACCTCCTGAAATAGCCTGGCTACTT-GAAGAAAACACATACCAGGTCTGCAGGACTCTGCGATACTCAGGGCACATGCCCGGCCAAAGACGACCAAGTCCAAGAGCGAGTTGGCTCCGAGGCGGTTGGCACCGTGCACCGAGGCGCAGGCGGCCTCCCCGCATGCATACAGGCCAGGCACAATCTGATCCTGGCCATTC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 361534 186 - 913073 ----------------------CAGCTTGTCT-GCT-GGAGGACACACATACCGGGTCTGCAAGACTCCGCGATACTCAGGGCGCACGCACGGCCAAAGACCACCAGGTCCAGGAGGGAGTTTGCGCCAAGCCGGTTGGCACCGTGGACGGAGGCACAGGCGGCCTCCCCACAGGCATACAGCCCAGGCACGATTTGGTCCTTGCCGTTC i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 21373 66 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=463343.000000 s hg38.chr3_KI270934v1_alt 119130 38 + 163458 CCGTGCCTCAGGACCTGT-GGAAAGGAAGATTTCAGGTG s panTro5.chr3 2589639 38 - 202621043 CCGTGCCTCAGGACCTGT-GGAAAGGAAGATTTCAGGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 176878 38 - 190779 CCGTGCCTCAGGACCTGT-GGAAAGGAAGATTTCAGGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 11737 38 + 880730 ACGTGCCTCAGGACCTGT-GGAAAGGAAGATTTCAGGTG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179840714 38 - 180051392 ACGTGCCTCAGGACCTGT-GGAAAGGAAGATTTCAGGTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1309849 38 + 181584905 ACGTGCCTCAGGACCTGT-GGAAAGGAAGATTTCAGGTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64647 38 + 100774 ACGTGCCTCAGGACCTGT-GGAAAGGAAGATTTCAGGTG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 21439 38 - 218577 CCGTGCCTCAGGACCTGT-GGAAAGGAAGGTTTCAGGTG i cerAty1.NW_012004452v1 I 66 I 2540 s chlSab2.chr4 1400850 38 + 91010382 ACGTGCCTCAGGACCTGT-GGAAAGGAAGATTTCAGGTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61243 38 + 74206 ACGTGCCTCAGGACCTGT-GGAAAGGAAGATTTCAGGTG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 795204 38 - 1687011 ACGTGCCTCAGGACCTGT-GGAAAGGAAGATTTCAAGTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160498 35 + 204313951 ACGTGCCTCAGGACCTGT-GGAA---AAGATTTCAGGTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16302605 38 + 16417988 ACGTGCCTCAGGACCTGT-GGAAAAGAAGATTTCAGGTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 89720 38 - 306014 ACATGCCTCAGGACCTGT-GGAAAAGAAGATTTCAGGTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133427 38 - 211231 ACGTGCCTCAGGACCTGT-GGAAAAGAAGATTTCAGGTG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2120483 38 - 2165740 ACGTGCTTCAGGACCTGT-GGAAAAGCAGATTTCAGATA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74331456 34 + 120421639 ACATGCTTCAGCACCTGT-----AGGAATATTTCAGATG i mm10.chr13 C 0 C 0 s canFam3.chr34 11948923 31 + 42124431 ACGTGCCTCAGAACCTGT-AGG-AGGAAGA------GTG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 361720 39 - 913073 ACATGCCGTAGAACCTATCAGGCAAAAAGAGTTAGGATG i dasNov3.JH577625 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=612311.000000 s hg38.chr3_KI270934v1_alt 119168 77 + 163458 AAA---------TGTCAAGATGCCCATTCCTCCACAAGCCCACCTCCCTCAACAGGGTGTCTGTGCTGCAGGTCAGAGAA--AGAGAG s panTro5.chr3 2589677 77 - 202621043 AAA---------TGTCAAGATGCCCATTCCTCCACAAGCCCACCTCCCTCAACAGGGTGTCTGTGCTGCAGGTCAGAGAA--AGAGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 176916 77 - 190779 AAA---------TGTCAAGATGCCCATTCCTCCACAAGCCCACCTCCCTCAACAGGGTGTCTGTGCTGCAGGTCAGAGAA--AGAGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 11775 77 + 880730 AAA---------TGTCAAGGTGCCTATTCCTCCACAAGCCCACCTCCCTCAACAAGGTGTCTGTGCTGCAGGTCAGAGAA--AGAGAG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179840752 77 - 180051392 AAA---------TGTCAAGGTGCCCATACCTCCACCAGCCTACCTCCCCCAGCAGGGTGTCTGTGCTGCAGACCAGAGAA--AGAGAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1309887 77 + 181584905 AAA---------TGTCAAGGTGCCCATACCTCCACCAGCCCACCTCCCCCAGCAGGGTGTCTGTGCTGCAGACCAGAGAA--AGAGAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64685 77 + 100774 AAA---------TGTCAAGGTGCCCATACCTCCACCAGCCTACCTCCCCCAGCAGGGTGTCTGTGCTGCAGACCAGAGAA--AGAGAG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1400888 79 + 91010382 AAA---------TGTCAAGGTGCCCATACCTCCACCAGCCCACCTCCCCCAACAGGGTGTCTGTGCTGCAGACCAGAGAAAGAGAGAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61281 77 + 74206 AAA---------TGTCAAGGTGCCCGTACCTCCACCAGCCCACCTCCCCCAGCAGGGTGTCTGTGCTGCAGACCAGAGAA--AGAGAG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 795242 77 - 1687011 AAA---------TGTCAAGGTGCCCATACCTCCACCAGGCCACCTCCCCCAGCAGGGTGTCTGTGCTGCAGACCAGAGAA--AGAGAG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160533 76 + 204313951 AA----------GGTCAAGGTGCCCATGCCTCCACAAGCCCACCTCCCCCAACAGGGTATCTGTGCTGCAGGTCAGAGAA--AGAGAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16302643 86 + 16417988 AAGATTTCAGATGGTCAAGGTGCCCATGCCTCCACAAGCCCACCTTCCCCAACAGGGTATCTGTGCTACAGGTCAGAGAA--AGAGAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 89758 76 - 306014 AAA---------GGTCAAGGTGCCCATGCCTCCACAAGCCCACCT-CCCCAACAGGGTATCTGTGCTGCAGGTCAGAGAA--AGAGAG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133465 73 - 211231 CAA---------TGTCAAGGTGCCCATGCCTCCACAAGCCCACCTCCCCCAACAGGGTTTCTGTGCTGCAGGTCAGAGAA------AG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2120521 63 - 2165740 AAA---------TTTCAAGGTACCT--------------CTGTCTCCCTAAATAAGGCATCTGTGCCATCTGTCAGAGAA--GGGGAG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74331490 76 + 120421639 AAG---------CAACAAAATACCTATGCGTCCATATGCCTGCTTCCCT-GGCAGACTTCCTATGCCTGAAGTAGCAAAA--GTAAAG i mm10.chr13 C 0 I 35 s canFam3.chr34 11948954 69 + 42124431 AAG---------ACTTTAGGAGCACA-GTTTGTACCCGTCTGCTTCCCAGCAGGGGATGTCTGCATGCAGGGGCAGAGA--------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 361759 75 - 913073 -AA---------CATCAACATGCA-ACGTCTTCCCAGGCCTGCTTCCCTCAGTGGAGTACCTGCGTGTTAGGCTGGGAGG--GTAGGG i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 21477 2540 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=35384.000000 s hg38.chr3_KI270934v1_alt 119245 3 + 163458 GGA s panTro5.chr3 2589754 3 - 202621043 GGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 176993 3 - 190779 GGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 11852 3 + 880730 GGA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179840829 3 - 180051392 GGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1309964 3 + 181584905 GGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64762 3 + 100774 GGA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1400967 3 + 91010382 AGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61358 3 + 74206 GGA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 795319 3 - 1687011 GGA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160609 3 + 204313951 GGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16302729 3 + 16417988 GGA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 89834 3 - 306014 GGA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133538 3 - 211231 GGA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2120584 3 - 2165740 GAA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11949023 3 + 42124431 GGA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 361834 3 - 913073 GGA i dasNov3.JH577625 C 0 I 222 e mm10.chr13 74331566 35 + 120421639 I e cerAty1.NW_012004452v1 21477 2540 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=38762.000000 s hg38.chr3_KI270934v1_alt 119248 5 + 163458 AGTAg s panTro5.chr3 2589757 5 - 202621043 AGTAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 176996 5 - 190779 AGTAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 11855 5 + 880730 AGTAg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179840832 5 - 180051392 AGTAg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1309967 5 + 181584905 AGTAg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64765 5 + 100774 AGTAg i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1400970 5 + 91010382 GGTAg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61361 5 + 74206 AGTAg i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 795322 5 - 1687011 AGTAg i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160612 5 + 204313951 AGCAg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16302732 5 + 16417988 AGCAg i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 89837 5 - 306014 AGCAg i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133541 5 - 211231 AGCAg i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2120587 5 - 2165740 GTTAG i otoGar3.GL873745 C 0 I 16 s canFam3.chr34 11949026 5 + 42124431 TGGAG i canFam3.chr34 C 0 C 0 e mm10.chr13 74331566 35 + 120421639 I e dasNov3.JH577625 361837 222 - 913073 I e cerAty1.NW_012004452v1 21477 2540 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=101189.000000 s hg38.chr3_KI270934v1_alt 119253 19 + 163458 gtcgggcatgcagtggctc s panTro5.chr3 2589762 19 - 202621043 gtcgggcatgcagtggctc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177001 19 - 190779 gtcgggcatgcagtggctc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 11860 19 + 880730 gccgggcatgcagtggctc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179840837 17 - 180051392 gccaggc--gcggtggctc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1309972 17 + 181584905 gccaggc--gcggtggctc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64770 17 + 100774 gccaggc--gcggtggctc i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1400975 17 + 91010382 gccaggc--gcggtggctc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61366 17 + 74206 gccaggc--gcggtggctc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 795327 16 - 1687011 gccaggc--gcggtggc-c i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160617 16 + 204313951 gctgggc--gca-tggctc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16302737 17 + 16417988 gccgggc--gcagtggctc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 89842 17 - 306014 gccgggc--gcagcagctc i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133546 17 - 211231 gccgggc--gcagtggctc i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 11949031 19 + 42124431 GGCAGGTAAGGACTGGATC i canFam3.chr34 C 0 I 191 e mm10.chr13 74331566 35 + 120421639 I e dasNov3.JH577625 361837 222 - 913073 I e otoGar3.GL873745 2120592 16 - 2165740 I e cerAty1.NW_012004452v1 21477 2540 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=146882.000000 s hg38.chr3_KI270934v1_alt 119272 22 + 163458 acgcttgtaatcccagcacttt s panTro5.chr3 2589781 22 - 202621043 atgcttgtaatcccagcacttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177020 22 - 190779 atgcttgtaatcccagcacttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 11879 22 + 880730 acgcctgtaatcccagcacttt i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179840854 22 - 180051392 acgcctgtaatcccagcacttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1309989 22 + 181584905 acgcctgtaatcccagcacttt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64787 22 + 100774 acgcctgtaatcccagcacttt i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1400992 22 + 91010382 acgcctataatcccagcacttt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61383 22 + 74206 acgcctgtaatcccagcacttt i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 795343 22 - 1687011 atacctgtaatcccagcacttt i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160633 21 + 204313951 atgcctgtaat-ccaacacttt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16302754 21 + 16417988 atgcctgtaat-ccaacacttt i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 89859 21 - 306014 atgcctgtaat-ccaacacttt i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133563 21 - 211231 gcacctgtaat-ccaacacttt i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74331566 35 + 120421639 I e dasNov3.JH577625 361837 222 - 913073 I e canFam3.chr34 11949050 191 + 42124431 I e otoGar3.GL873745 2120592 16 - 2165740 I e cerAty1.NW_012004452v1 21477 2540 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=710607.000000 s hg38.chr3_KI270934v1_alt 119294 135 + 163458 gggaggctgaggcgggtggatcacctgagttcaggggttcgaga--cctgtctggctaacatggtgaaaccccgtctcaactaaaaatataaaaattagccaggcatgatggcaggtgcctgtaatcccagctactc s gorGor5.CYUI01015759v1 11901 135 + 880730 gggaggctgaggcgggtggatcacctgagttcagtggttcgaga--cctgtctggctaacatggtgaaaccccgtctcaactaaaaatacaaaaattagccaggcatgatggcgggtgcctgtaatcccagctactc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179840876 135 - 180051392 gggaggttgaggcgggtggatcacctgaggtcaggggttcgaga--cctgcctggctaacatggtgaaaccccgtctcaactaaaaatacaaaaattagtgaggcatgacggcgagtgcctataatcccagctactc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310011 135 + 181584905 gggaggttgaggcgggtggatcacctgaggtcaggggttcgaga--cctgcctggctaacatggtgaaaccccgtctcaactaaaaatacaaaaattagtgaggcatgacggcgagtgcctataatcccagctactc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64809 135 + 100774 gggaggttgaggcgggtggatcacctgaggtcaggggttcgaga--cctgcctggctaacatggtgaaaccccgtctcaactaaaaatacaaaaattagtgaggcatgacggcgagtgcctataatcctagctactc i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1401014 135 + 91010382 gggaggttgaggcgggtggatcacctgaggtcaggggttcgaga--cctgtctggctatcatggtgaaaccccgtctcaactaaaaatacaaaaattagccaggcatgatggcgagtgcctgtaatcccagctactc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61405 135 + 74206 gggaggttgaggcgggtggatcacctgaggtcaggggttcgaga--tctgtctggctaacatggtgaaaccccatctcaactaaaaatacaaaaatcagccaggcatgatggcgagtgcctgtaatcccagctactc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 795365 135 - 1687011 gggaggttgaggcgggtggatcacctgaggtcaggggttcaaga--cctgcctggctaacatggtgaaaccccgtctcaactaaaaatacaaacattagccaggcatgatggcgggtgcctataatcccagctactc i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160654 134 + 204313951 ggaaggctgaggtgagtggatcacctgagatcaggggttcaaga--ccagcctggctaa-atggtgaaaccctgtctttactaaaagtgcaaaaattagccaagcatgatggtgggtgcctgtaatcccagctaccc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16302775 135 + 16417988 ggaaggctgaggcgggtggatcacctgagatcaggggttcaaga--ccagactggttaatatggtgaaaccctatctctactaaaagtacaaaaattagccaagcatgatgacgggtgcctgtaattccagctaccc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 89880 135 - 306014 ggaaggctgaggcgggcggatcacctgagatcaggggttcaaga--ccagcctgagtaataaggtgaaaccctgtctctactaaaagtacaaaaattagccaagcatgatggcgggtgcctgtaatcccagctacca i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133584 137 - 211231 ggaaggctgaggcgggtggatcgcctgagatcaggggttcaagacccccgtctggctaatatggtgaaaccgtgtctctactaaaagtacaaaaattagccgagaatgatggcagatgcctgtaaccccagctacct i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74331566 35 + 120421639 I e dasNov3.JH577625 361837 222 - 913073 I e canFam3.chr34 11949050 191 + 42124431 I e otoGar3.GL873745 2120592 16 - 2165740 I e cerAty1.NW_012004452v1 21477 2540 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 177042 0 - 190779 C e panTro5.chr3 2589803 0 - 202621043 C a score=755699.000000 s hg38.chr3_KI270934v1_alt 119429 108 + 163458 gggaggctgaggcagaagaatcgcttgaacctgggaggcggaggttgcagtgagccgagatcgcgccattgcactccagcctaagcgaca--gagcgagtctccatctcc s panTro5.chr3 2589803 110 - 202621043 gggaggctgaggcagaagaatcgcttgaacctgggaggcggaggttgcagtgagccgagatcgtgccattgcactccagcctaagcgacacagagcgagtctccatctcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177042 110 - 190779 gggaggctgaggcagaagaatcgcttgaacctgggaggcggaggttgcagtgagccgagatcgtgccattgcactccagcctaagcgacacagagcgagtctccatctcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12036 108 + 880730 gggaggctgaggcagaagaatcgcttgaacctgggaggcggaggttgcagtgagccgagatcgcaccactgcactccagcctaagtgaca--gagcgagtctccatctcc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841011 108 - 180051392 gggaggctgaggcagaagaatcgcttgaacctgggaggcggaggttgcagtgagccgagattgcgccattgtactccagcctaagcgaca--gagcgagactgaatctcc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310146 108 + 181584905 gggaggctgaggcagaagaatcgcttgaacctgggaggcggaggttgcagtgagccgagattgcgccattgtgctccagcctaagcgaca--gagcgagactgaatctcc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64944 108 + 100774 gggaggctgaggcagaagaatcgcttgaacctgggaggcggaggttgcagtgagccgagattgcgccattgtgctccagcctaagcgaca--gagcgagactgaatctcc i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1401149 108 + 91010382 gggaggctgaggcagaagaatcgcttgaacctggaaggcggaggttgcagtgagccaagattgcgccactgcactccagcctaagcgaca--gagcgagactgaatctcc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61540 108 + 74206 gggaggctgaggcagaagaatcgcttgaacctgggaggcggaggttgcagtgagccaagattgtgccactgcactccagcctaagcaaca--gagcgagactgaatctcc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 795500 102 - 1687011 aggaggct------gaagaatcgcttgaacctgggaggcggaggttgcagtgagctgagattgcaccattgtgctccagcctaagcgaca--gagcgagactgaatctcc i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160788 107 + 204313951 gggaggctgaggtggaagaatcatttgaattagg-aggcggaggttgcaatcagctgagattgcgtcattgcactccagtctgggcgaca--gagtgagactccatctcc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16302910 107 + 16417988 gggaggctgagggggaagaatcacttgaacttgg-aggtggaggctgtagtgagctgagatcgcgtcactgcactctagcctgggcaaca--gagtgagactccatctcc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90015 107 - 306014 gggaggctgaggtggaagaatcacttgaacttgg-aggcggaggttgcagtgagctgagatcgcgtcattgcactccagcctgggcgaca--gagtgagactccatctct i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133721 107 - 211231 gggaggttaaggtggaagaatcacttgaacttgg-aggcagaggttgcagtgagctgagatcgcatcattgcactccagcctgggcgaca--gagtgagactccgtctcc i aotNan1.NW_018494784v1 C 0 I 20 e mm10.chr13 74331566 35 + 120421639 I e dasNov3.JH577625 361837 222 - 913073 I e canFam3.chr34 11949050 191 + 42124431 I e otoGar3.GL873745 2120592 16 - 2165740 I e cerAty1.NW_012004452v1 21477 2540 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=143558.000000 s hg38.chr3_KI270934v1_alt 119537 34 + 163458 -aagaa-------------------------acaaagagaGGGAAGTAAAGACCATATCT s panTro5.chr3 2589913 34 - 202621043 -aagaa-------------------------acaaaGAGAGGGAAGTAAAGACCATATCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177152 34 - 190779 -aagaa-------------------------acaaaGAGAGGGAAGTAAAGACCATATCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12144 34 + 880730 -aagaa-------------------------acaaaGAGAGGGAAGTAAAGACCATATCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841119 30 - 180051392 -aagac-------------------------aaaa----aGGGAAGGAAAGACCACATCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310254 30 + 181584905 -aagaa-------------------------aaaa----aGGGAAGGAAAGACCATATCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65052 30 + 100774 -aagaa-------------------------aaaa----aGGGAAGGAAAGACCATATCT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1401257 32 + 91010382 -aagaa-------------------------aaaa--aGAGGGAAGGAAAGACCATATCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61648 30 + 74206 -aagaa-------------------------aaaa----aGGGAAGGAAAGACCATATCT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 795602 31 - 1687011 -aagaa-------------------------aaaa--aGAGGGAAGGAAAGA-CATATCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160895 35 + 204313951 aaaaaa-------------------------ataaagagaGGGAAGTAAAGACCACATCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303017 60 + 16417988 ggaaaaaaaaaaaaaaaaccaaaaaacaaATAAAAAGAGAGGGAAGAAAAGAGCACATCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90122 42 - 306014 gaaaaa------------------aataaataaaaaGAGAGGGAAGCAAAGACTACATCT i cebCap1.NW_016108150v1 C 0 C 0 e mm10.chr13 74331566 35 + 120421639 I e aotNan1.NW_018494784v1 133828 20 - 211231 I e dasNov3.JH577625 361837 222 - 913073 I e canFam3.chr34 11949050 191 + 42124431 I e otoGar3.GL873745 2120592 16 - 2165740 I e cerAty1.NW_012004452v1 21477 2540 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=75916.000000 s hg38.chr3_KI270934v1_alt 119571 11 + 163458 AAGAAGGAAGT s panTro5.chr3 2589947 11 - 202621043 AAGAAGGAAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177186 11 - 190779 AAGAAGGAAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12178 11 + 880730 AAGAAGGAAGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841149 11 - 180051392 AAGAGGGAGGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310284 11 + 181584905 AAGAGGGAGGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65082 11 + 100774 AAGAGGGAGGT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1401289 11 + 91010382 AAGAGGGAGGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61678 11 + 74206 AAGAGGGAGGG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 795633 11 - 1687011 CAGAGGGAGGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160930 11 + 204313951 AAGAGGGAAGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303077 11 + 16417988 AAGAGCGAAGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90164 11 - 306014 AAGAGGGAAGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133848 11 - 211231 aagaGGGAAGT i aotNan1.NW_018494784v1 I 20 C 0 e mm10.chr13 74331566 35 + 120421639 I e dasNov3.JH577625 361837 222 - 913073 I e canFam3.chr34 11949050 191 + 42124431 I e otoGar3.GL873745 2120592 16 - 2165740 I e cerAty1.NW_012004452v1 21477 2540 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=371434.000000 s hg38.chr3_KI270934v1_alt 119582 44 + 163458 AAGGACCATAGCTACTCTTCTTCAGAAGGAAACTTCCGAATGTA s panTro5.chr3 2589958 44 - 202621043 AAGGACCATAGCTACTCTTCTTCAGAGGGAAACTTCCGAATGTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177197 44 - 190779 AAGGACCATAGCTACTCTTCTTCAGAGGGAAACTTCCGAATGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12189 44 + 880730 AAGGACCACAGCTACTCTTCTTCAGAGGGAAACTTCTGAATGTA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841160 44 - 180051392 AAGGACCATAGCTCCTCTTCTTCAGAGGGAAGCTTCCGAATGTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310295 44 + 181584905 AAGGACCATAGCTCCTCTTCTTCAGAGGGAAGCTTCCGAATGTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65093 44 + 100774 AAGGACCATAGCTCCTCTTCTTCAGAGGGAAGCTTCCGAATGTC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 24017 44 - 218577 AAGGACCATAGCTCCTCTTCTTCAGAGGGAAGCTTCCGAATGTC i cerAty1.NW_012004452v1 I 2540 C 0 s chlSab2.chr4 1401300 44 + 91010382 AAGGACCATAGCTCCTCTTCTTCAGAGGGAAGCTTCCGAATGTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61689 44 + 74206 AAGGACCATAGCTCCTCTTCTTCAGAGGGAAGCTTCCGAATGTC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 795644 44 - 1687011 AAGGACCATAGCTCCTCTTCTTCAGAGGGAAGCTTCCGAATGTA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160941 44 + 204313951 AAGGACCAGAGCTACTCTTCTTCAGAGGGAAACTTCCAAATGTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303088 35 + 16417988 ---------AGCTACTCTTCTTCAGAAGGAAACTTCCGAATATA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90175 44 - 306014 AAGGAGCACAGCTACTCTTCTTCAGAGGGAAACTTCCGAATATA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133859 44 - 211231 AAAGACCATAGTTACTCTTCTTCAGAGGGAAACTTCCGAATGTA i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74331566 35 + 120421639 I e dasNov3.JH577625 361837 222 - 913073 I e canFam3.chr34 11949050 191 + 42124431 I e otoGar3.GL873745 2120592 16 - 2165740 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=-6771.000000 s hg38.chr3_KI270934v1_alt 119626 2 + 163458 TA s panTro5.chr3 2590002 2 - 202621043 TC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177241 2 - 190779 TC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12233 2 + 880730 TC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841204 2 - 180051392 CC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310339 2 + 181584905 CC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65137 2 + 100774 CC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 24061 2 - 218577 CC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1401344 2 + 91010382 CC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61733 2 + 74206 CC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 795688 2 - 1687011 TC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160985 2 + 204313951 TG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303123 2 + 16417988 TC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90219 1 - 306014 T- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133903 1 - 211231 T- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2120608 2 - 2165740 TG i otoGar3.GL873745 I 16 C 0 e mm10.chr13 74331566 35 + 120421639 I e dasNov3.JH577625 361837 222 - 913073 I e canFam3.chr34 11949050 191 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=311937.000000 s hg38.chr3_KI270934v1_alt 119628 46 + 163458 CCCCAGTTTCCCCTCTGCCCCTGAGCACCTGCTGT----TACAAGCAGGT s panTro5.chr3 2590004 46 - 202621043 CCCCAGTTTCCCCTCTGCCCCTGAGCACCTGCTGT----TACAAGCAGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177243 46 - 190779 CCCCAGTTTCCCCTCTGCCCCTGAGCACCTGCTGT----TACAAGCAGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12235 46 + 880730 CCCCAGTTTCCCCTCTGCCCCTGAGCACCTGCTGT----TACAAGCAGGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841206 42 - 180051392 CCC---ATTTCCCTCTGCCCT-GAGCACCTGCTGT----TACAAGCAGGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310341 42 + 181584905 CCC---ATTTCCCTCTGCCCT-GAGCACCTGCTGT----TACAAGCAGGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65139 42 + 100774 CCC---ATTTCCCTCTGCCCT-GAGCACCTGCTGT----TACAAGCAGGT i macNem1.NW_012013899v1 C 0 I 138 s cerAty1.NW_012004452v1 24063 42 - 218577 CCC---GTTTCCCTCTGCCCC-GAGCACCTGCTGT----TACAAGCAGGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1401346 42 + 91010382 CCC---GTTTCCCCCTGCCCC-GAGCACCTGCTGT----GACCAGTGTAT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61735 42 + 74206 CCC---GTTTCCCTCTGCCCC-GAGCACCTGCTGT----TACAAGCAGGT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 795690 41 - 1687011 CCC---GTTTTCCT-TGCCCC-GAGCACCTGCTGT----GACCAGTAGAT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204160987 44 + 204313951 CCCCAGTTTCCTCTCTGCCC--GAGTACCTGCTGT----TACAAGCAGGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303125 45 + 16417988 CCCCCGTTTCCTCTCTGCCCT-GAGTACCTGCTGT----TAGAAGCAGGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90220 45 - 306014 CCCCCGTTTCCTCTCTGCCCT-GAGCACCTGCTGT----TAGAAGCAGGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133904 40 - 211231 -CCCCGTTTCCTCTCTGCCA--GAGCACCTGCTGT----TACA---ACAT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2120610 46 - 2165740 CCCCACTTCCCCCTTTGCCCCTGAACACTCAGCAT----ACTGAGTAGGC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74331601 50 + 120421639 CCCCAGTTCTCCTTTTGCTCCAAAACTCTTGCTGTTTGCTACCAACAGGT i mm10.chr13 I 35 C 0 e dasNov3.JH577625 361837 222 - 913073 I e canFam3.chr34 11949050 191 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=217145.000000 s hg38.chr3_KI270934v1_alt 119674 26 + 163458 CAGAGGGCCTCCAATGTCAGCATCTG s panTro5.chr3 2590050 26 - 202621043 CAGAGGACCTCCAATGTCAGCATCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177289 26 - 190779 CAGAGGACCTCCAATGTCAGCATCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12281 26 + 880730 CAGAGGACCTCCAATGTCAGCATCTG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841248 26 - 180051392 CAGAGGACCCCTAATGTCAGCGTCTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310383 26 + 181584905 CAGAGGACCCCTAATGTCAGCGTCTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65319 26 + 100774 CAGAGGACCCCCAATGTCGGCATCTG i macNem1.NW_012013899v1 I 138 C 0 s cerAty1.NW_012004452v1 24105 26 - 218577 CAGAGGACCCCCAATGTCAGCGTCTG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1401388 25 + 91010382 CAGAGGA-CCCCAATGTCGGCATCTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61777 26 + 74206 CAGAGGACCCCCAATGTCAGCGTCTG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 795731 26 - 1687011 CAGAGGACCCCCAATGTCGGCATTTG i colAng1.NW_012116910v1 C 0 I 157 s calJac3.chr2 204161031 26 + 204313951 CAGAGGACTTCCAATGTCAGCATCTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303170 26 + 16417988 CAGAGGACCTCCAATGTCAGCATCTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90265 26 - 306014 CAGAGGACCTCCAATGTCAGCATCTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133944 26 - 211231 CAGAGGACCTCCAACGTCAGTATCTG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2120656 13 - 2165740 CAAATGGCCTCCA------------- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74331651 7 + 120421639 CAAAGGA------------------- i mm10.chr13 C 0 C 0 e dasNov3.JH577625 361837 222 - 913073 I e canFam3.chr34 11949050 191 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=3860.000000 s hg38.chr3_KI270934v1_alt 119700 1 + 163458 C s panTro5.chr3 2590076 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177315 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12307 1 + 880730 C i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841274 1 - 180051392 C i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310409 1 + 181584905 C i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65345 1 + 100774 T i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 24131 1 - 218577 C i cerAty1.NW_012004452v1 C 0 I 138 s chlSab2.chr4 1401413 1 + 91010382 C i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61803 1 + 74206 C i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 795914 1 - 1687011 C i colAng1.NW_012116910v1 I 157 C 0 s calJac3.chr2 204161057 1 + 204313951 T i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303196 1 + 16417988 T i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90291 1 - 306014 T i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133970 1 - 211231 T i aotNan1.NW_018494784v1 C 0 C 0 e mm10.chr13 74331658 0 + 120421639 C e dasNov3.JH577625 361837 222 - 913073 I e canFam3.chr34 11949050 191 + 42124431 I e otoGar3.GL873745 2120669 0 - 2165740 C e nomLeu3.chr11 2900956 4012 - 123690457 I a score=43818.000000 s hg38.chr3_KI270934v1_alt 119701 11 + 163458 GACTGTCCCC-C s panTro5.chr3 2590077 11 - 202621043 GACTGTCCCC-C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177316 11 - 190779 GACTGTCCCC-C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12308 11 + 880730 GACTGTCCCC-C i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841275 10 - 180051392 GACTGTCCCT-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310410 10 + 181584905 GACTGTCCCT-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65346 10 + 100774 GACTGTCCCC-- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 24270 10 - 218577 GACTGTCCCC-- i cerAty1.NW_012004452v1 I 138 C 0 s chlSab2.chr4 1401414 11 + 91010382 GACTGTCTCCA- i chlSab2.chr4 C 0 I 369 s manLeu1.NW_012101728v1 61804 10 + 74206 GACTGTCCCT-- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 795915 10 - 1687011 GACTGTCCCC-- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204161058 10 + 204313951 GACTGTCCTC-- i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 16303197 8 + 16417988 GAC--TTCTC-- i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 90292 10 - 306014 GACTGTTCTC-- i cebCap1.NW_016108150v1 C 0 I 1 s aotNan1.NW_018494784v1 133971 10 - 211231 GACTGTCCTC-- i aotNan1.NW_018494784v1 C 0 I 1 s otoGar3.GL873745 2120669 2 - 2165740 ------CC---- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74331658 0 + 120421639 C e dasNov3.JH577625 361837 222 - 913073 I e canFam3.chr34 11949050 191 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=6864.000000 s hg38.chr3_KI270934v1_alt 119712 1 + 163458 G s panTro5.chr3 2590088 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177327 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12319 1 + 880730 G i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841285 1 - 180051392 G i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310420 1 + 181584905 G i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65356 1 + 100774 G i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 24280 1 - 218577 G i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1401794 1 + 91010382 G i chlSab2.chr4 I 369 C 0 s manLeu1.NW_012101728v1 61814 1 + 74206 G i manLeu1.NW_012101728v1 C 0 I 138 s colAng1.NW_012116910v1 795925 1 - 1687011 G i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204161069 1 + 204313951 G i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 16303206 1 + 16417988 A i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 90303 1 - 306014 A i cebCap1.NW_016108150v1 I 1 C 0 s aotNan1.NW_018494784v1 133982 1 - 211231 G i aotNan1.NW_018494784v1 I 1 C 0 s otoGar3.GL873745 2120671 1 - 2165740 A i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74331658 0 + 120421639 C e dasNov3.JH577625 361837 222 - 913073 I e canFam3.chr34 11949050 191 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=233361.000000 s hg38.chr3_KI270934v1_alt 119713 29 + 163458 TGTCCCATGTTCCCGAGG----CCCTCA-CC-ACC s panTro5.chr3 2590089 29 - 202621043 TGTCCCATGTTCCCGAGG----CCCTCA-CC-ACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177328 29 - 190779 TGTCCCATGTTCCCGAGG----CCCTCA-CC-ACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12320 29 + 880730 TGTCCCATGTTCCTGAGG----CCCTTA-CC-ACC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841286 29 - 180051392 TGTCCCATGTTCCCGAGG----CCCTCA-CC-ACC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310421 29 + 181584905 TGTCCCATGTTCCCGAGG----CCCTCA-CC-ACC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65357 29 + 100774 TGTCCCATGTTCCCGAGG----CCCTCA-CC-ACC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 24281 29 - 218577 TGTCCCATGTTCCCGAGG----CCCTCA-CC-ACC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1401795 29 + 91010382 TGTCCCATGTTCCCGAGG----CCCTGA-CC-ACT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61953 29 + 74206 TGTCCCATGTTCCCGAGG----CCCTCA-CC-ACC i manLeu1.NW_012101728v1 I 138 C 0 s colAng1.NW_012116910v1 795926 29 - 1687011 TGTCCCACGTTCCCGAGG----CCCTCA-CC-ACC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204161070 30 + 204313951 TGTCCTATGTCCCCAAGG----ACCTCT-CCTACC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303207 30 + 16417988 TGTCCTGTGTCCCCAGGG----ACCTCT-CCTACC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90304 31 - 306014 TGTCCTATGTCCCCAAGG----ACCTTTCCCTACT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 133983 30 - 211231 TGTCCTGTGTCCCCAAGG----ACCTCT-CCTACC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2120672 29 - 2165740 CATCCAGTGCTCCTTAGG----ACCTTG-CC-CCC i otoGar3.GL873745 C 0 I 40 s mm10.chr13 74331658 33 + 120421639 TGGTTTAGGTTTCCCAGAGTGTCAGTCA-CC-ACC i mm10.chr13 C 0 C 0 e dasNov3.JH577625 361837 222 - 913073 I e canFam3.chr34 11949050 191 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=514599.000000 s hg38.chr3_KI270934v1_alt 119742 63 + 163458 TGTGCTCCAGCTCAGACCCAGGAGCACGGCAGGTGGAGGAACATCAGCAGGGGAGACTGATGT s panTro5.chr3 2590118 63 - 202621043 TGTGCTCCAGCTCAGACCCAGGAGCACGGCAGGTGGAGGAACATCAGCAGGGGAGACTGATGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177357 63 - 190779 TGTGCTCCAGCTCAGACCCAGGAGCACGGCAGGTGGAGGAACATCAGCAGGGGAGACTGATGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12349 63 + 880730 TGTGCTCCAGCTCAGACCCAGGAGCACGGTAGGTGGAGGAACATCAGCAGGGGAGACTGATGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841315 63 - 180051392 TGCACTCTGGCTCAGACCCGGGAGCACGGCAGGTGGAGGAACATCAGCAGGTGACACTGATGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310450 63 + 181584905 TGCACTCCGGCTCAGACCCGGGAGCACGGCAGGTGGAGGAACATCAGCAGGTGACACTGATGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65386 63 + 100774 TGCACTCCGGCTCAGACCCGGGAGCACGGCAGGTGGAGGAACATCAGCAGGTGACACTGATGT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 24310 63 - 218577 TGCGCTCCGGCTCAGACCCGGGAGCACGGCAGGTGGAGGAACATCAGCAGGTGACACTGATGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1401824 63 + 91010382 TGCGCTCCAGCTCAGACCTGGGAGCACGGCAGGTGGAGGAACATCAGTAGGTGACACTGATGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 61982 63 + 74206 TGCGCTCCGGCTCAGACCCGGGAGCACGGCAGGTGGAGGAACATCAGTAAGTGACACTGATGT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 795955 63 - 1687011 TGCGCTCCGGCTCAGACCCGGGAGCACGGCAGGTGGAGGAACATCAGCAGGCGACACTGATGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204161100 62 + 204313951 TGTGATCTGGCTCAGACCCGAGAGCACAGCAGGTGGAGGAACATCAGC-AGGGAGACTGATGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303237 54 + 16417988 TGTGATCTGGCTCAGACCCGAGAGCACAGCAGGTAGAGCA---------GGGGAGACCGATGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90335 63 - 306014 TGTGATCTGGCTCAGACCCGAGAGCACAGCAGGTGGAGGAACATTAGCAGGGGAGACCGATGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134013 63 - 211231 TGTGATCTGGCTCAGACCCAAGAGCACAGCAGGTGGAGGAACATCAGTAGGGGAGACCGATGT i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74331691 52 + 120421639 --TGATTTAACTAAG------GAATATGACAGGTGATGGAACACTAAAGGGAGGAGGAGA--- i mm10.chr13 C 0 C 0 e dasNov3.JH577625 361837 222 - 913073 I e canFam3.chr34 11949050 191 + 42124431 I e otoGar3.GL873745 2120701 40 - 2165740 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=205865.000000 s hg38.chr3_KI270934v1_alt 119805 29 + 163458 T---CCAGACTCTTCTACCCCCTGTTCACCT----C s panTro5.chr3 2590181 29 - 202621043 T---CCAGACTCTTCTACCCCCTGTTCACCT----C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177420 29 - 190779 T---CCAGACTCTTCTACCCGCTGTTCACCT----C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12412 29 + 880730 T---CCAGACTCTTCTACCCCCTGTTCACCT----C i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841378 29 - 180051392 T---CCAGACTCTTCTACCCCCTGTTCACCT----C i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310513 29 + 181584905 T---CCAGACTCTTCTACCCCCTGTTCACCT----C i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65449 29 + 100774 T---CCAGACTCTTCTACCCCCCGTTCACCT----C i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 24373 29 - 218577 T---CCAGACTCTTCTACCCCCCGTTCACCT----C i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1401887 29 + 91010382 T---CCAGACTCTTCTACCCCCCGTTCACCT----C i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 62045 29 + 74206 T---CCAGACTCTTCTACCCCCCGTTCACCT----C i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 796018 29 - 1687011 T---CCAGACTCTTCTACCTGCCGTTCACCT----C i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204161162 29 + 204313951 T---TCAGACTCTTCTACTCCCTGTTCATCT----A i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303291 33 + 16417988 T---TCAGACTCTTCTACTCCCTGTTCATCTATTCA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90398 32 - 306014 TCACTTATTCTCTTCTACTCCCTGTTCATCT----A i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134076 29 - 211231 T---TCAGACCCTTCTACTCCCTGTTCATGT----A i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2120741 24 - 2165740 T---CCAGACTC-TCCATCCACTGCTCA-------- i otoGar3.GL873745 I 40 C 0 s mm10.chr13 74331743 5 + 120421639 ---------------------------ACAG----G i mm10.chr13 C 0 C 0 e dasNov3.JH577625 361837 222 - 913073 I e canFam3.chr34 11949050 191 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=430501.000000 s hg38.chr3_KI270934v1_alt 119834 46 + 163458 TTCATC-TATGCGGGGAAAGTAACAGCTTCCACCCACCTCGCCCAAC--- s panTro5.chr3 2590210 46 - 202621043 TTCATC-TACGCAGGGAAAGTAACAGCTTCCACCCACCTCGCCCAAC--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177449 46 - 190779 TTCATC-TACGCAGGGAAAGTAACAGCTTCCACCCACCTCGCCCAAC--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12441 46 + 880730 TTCATC-TACGCAGGGAAAGTAACAGCTTCCACCCACCTCACCCAAC--- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841407 46 - 180051392 TTCATC-TATGCAGGGAAAGTAACAGCTGCCGCCCACCTTGCCCAAC--- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310542 46 + 181584905 TTCATC-TATGCAGGGAAAGTAACAGCTGCCGCCCACCTTGCCCAAC--- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65478 46 + 100774 TTCATC-TATGCAGGGAAAGTAACAGCTGCCGCCCACCTTGCCCAAC--- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 24402 46 - 218577 TTCATC-TACGCAGGGAAAGTAACAGCTGCCGCCCACCTTGCCCAAC--- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1401916 46 + 91010382 TTCATC-TACGCAGGGAAAGTAACAGCTGCCGCCCACCTCGCCCAAC--- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 62074 46 + 74206 TTCATC-TACGCAGGGAAAGTAACAGCTGCTGCCCACCTTGCCCAAC--- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 796047 46 - 1687011 TTCATC-TATGCAGGGAAAGTAACAGCTGCCGCCCACCTTGCCCAAC--- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204161191 46 + 204313951 TTCATC-TACGCAGGGAGAGTAACAGCTTCCACCCACCTCACCCGAC--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303324 46 + 16417988 TTCATC-TACGCAGGGAGAGTAACAGCTTCCACCCACCTCACCCGAC--- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90430 47 - 306014 TTCGTCGTAGGCAGAGAGAATAACAGCTTCCACCCACCTCACCCGAC--- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134105 46 - 211231 TTCATC-CACGCAGGGAGAGTAACAGCTTCCACCCACCTCACGCGAC--- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2120765 40 - 2165740 -----C-CATGAAGAGAGAAC-CCAACTCTCACACACCTCACCTTAC--- i otoGar3.GL873745 C 0 I 8 s mm10.chr13 74331748 44 + 120421639 ACCATC-TGTGAAGGG-GGGTAGTGG-TGCTGACCAGGAGTCCAAAC--- i mm10.chr13 C 0 I 3 s canFam3.chr34 11949241 44 + 42124431 TTCATC-TATAAAGGG--AGGAGTAGATCCCCAGCCACTTGCCTGAG--- i canFam3.chr34 I 191 I 8 s dasNov3.JH577625 362059 49 - 913073 TTCATC-TAAAAAGTGACAGTGGCAATTTCCACCCACCGTACAGAGTAGC i dasNov3.JH577625 I 222 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=660324.000000 s hg38.chr3_KI270934v1_alt 119880 122 + 163458 ----------AAGGAGGCTAAGTGACTGACAAGCTCTGTGTGAACCGCAAACCACTCAC-AGGTATGAATTATAAAGATCCTTCGATGTACAAGATCATTAGAAATAGGAATTATAAAGATCCCTTGATGTAT s panTro5.chr3 2590256 122 - 202621043 ----------AAGGAGGCTAAGTGACTGACAAGCTCTGTGTGAACCACAAACCACTCAA-AGGTATGAATTATAAAGATCCCTCGATGTACAAGATCATTAGAAATAGGAATTATAAAGATCCCTTGATGTAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177495 122 - 190779 ----------AAGGAGGCTAGGTGACTGACAAGCTCTGTGTGAACCACAAACCACTCAA-AGGTATGAATTATAAAGATCCCTCGATGTACAAGATCATTAGAAATAGGAATTATAAAGATCCCTTGATGTAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12487 121 + 880730 ----------AAGGAGGCTAAGTGACTGACAAGCTCTGTGTGAACCACAAACCACTCAA-AGGTATGAATTATAAAGATCC-TCGATGTACAAGATCATTAGAAATAGGAATTATAAAGATCCCTTGATGTAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841453 80 - 180051392 ----------AAGGAGCCTAAGTGACTGACAAGCTCTGTGTGCACCGCAAACCACTCAA-AGGTA------------------------------------------GGAATTAGAAAGATCCCTCGATGTAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310588 80 + 181584905 ----------AAGGAGCCTAAGTGACTGACAAGCTCTGTGTGAACCGCAAACCACTCAA-AGGTA------------------------------------------GGAATTAGAAAGATCCCTCGATGTAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65524 80 + 100774 ----------AAGTAGCCTAAGTGACTGACAAGCTCTGTGTGAACCACAAACCACTCAA-AGGTA------------------------------------------GGAATTAGAAAGATCCCTCGATGTAC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 24448 80 - 218577 ----------AAGGAGCCTAAGTGACTGACAAGCTCTGTGTGAACCGCAAACCACTCAA-AGGTA------------------------------------------GGAATTAGAAAGATCCCTTGATGTAC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1401962 80 + 91010382 ----------AAGTAGCCTAAGTGACTGACAAGCTCTGTGTGAACCGCAAACAACTCAA-AGGTA------------------------------------------GGAATTAGAAAGATCCCTCGATGTAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 62120 80 + 74206 ----------AAGTAGCCTAAGTGACTGACAAGCTCTGTGTGAACCGCAAACCACTCAA-AGGTA------------------------------------------GGAATTAGAAAGATCCCTTGATGTAC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 796093 80 - 1687011 ----------AAGGAGCCTAAGTGACCGACCAGCTCTGTGTGAACCACAAACCACTCAA-AGGTA------------------------------------------GGAATTAGAAAGATCCCTCAATGTAC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204161237 80 + 204313951 ----------AAGGAGCCTAAGCGACCAACAAGCTCTATGTGAACTGCAGACCACTCAA-AGGTA------------------------------------------CGAATTATAAAGATCCCTCGATGTAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303370 80 + 16417988 ----------AAGGAGCCTAAGTGACCAACAAGCTCTATGTGAACTGCAGACCACTCAA-AGGTA------------------------------------------TGAATTATAAAGATCCCTCGATGTAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90477 80 - 306014 ----------AAGGAGCCTAAGTGACCAACAAGCTCTATGTGAACTGCAGACCACTCAA-AGGTA------------------------------------------TGAATTATAAAGATCTCTCGATGTAC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134151 80 - 211231 ----------AAGGAGCCTAAGCGACTAACAAGCTCTGTGTGAACTGCAAACCACTCAA-AAGTA------------------------------------------TGAATTATAAAGATCCCTCGATGTAC i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74331795 66 + 120421639 ----------AAGGACC------AGCTGATAAGCACT-TGTAAACTGCTTATAACTCAA---GTA------------------------------------------CCAATTATA-----TCACTAATTTAT i mm10.chr13 I 3 C 0 s canFam3.chr34 11949293 79 + 42124431 ----------AAAAAAGTCAAG-AACCAAAAGGCTCTGGGTGGACTACAAACCACTCCA-AAGTATTG------------------------------------------GTTATAAAGAGCACACAATTTAA i canFam3.chr34 I 8 I 7 s dasNov3.JH577625 362108 105 - 913073 AATGAAACTAAAATAAAGTAACTGACTGGAAAGTTCTTTGTGAACTTC---CCATGCAAAAGGTATTAACTGTAACAATCAC-------------------------CCAATTTACAAGGTCATTGTAAGAAT i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 2120805 8 - 2165740 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1086039.000000 s hg38.chr3_KI270934v1_alt 120002 106 + 163458 AAGCTCATTA-GAAATAACACAAGATCATATAGGAAAGT-AATTATAAAATGGGAAAA--GCTGCAAATGA---TGTATCTA-------TGACAGTTTACTAAGGAGG----AATA--------------AATTATTA s panTro5.chr3 2590378 106 - 202621043 AAGATCATTA-GAAATAACACAAGATCATATAGGAAAGT-AATTATAAAATGGGAAAA--GCTGCAAATGA---TGTATCTA-------TGACAGTTTACTAAGGAGG----AATA--------------AATTATTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177617 106 - 190779 AAGATCATTA-GAAATAACACAAGATCATATAGGAAAGT-AATTATAAAATGGGAAAA--GCTGCAAATGA---TGTATCTA-------TGACAGTTTACTAAGGAGG----AATA--------------AATTATTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12608 106 + 880730 AAGATCATTA-GAAATAACACAAGATCATATAGGGAAGT-AATTATAAAATGGGAAAA--GCTGCAAATGA---TGTATCTA-------TTACAGTTTACTAAGGAGG----AATA--------------CATTATTA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841533 108 - 180051392 AAGATCATTA-GAAATAACACGAGATCATATAGGAAAGT-AACTATAAAATGGAAAAAAGGCTGCAAATGA---TGCATCTA-------TGACAATTTACTAAGGAGG----AATA--------------AATTATTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310668 108 + 181584905 AAGATCATTA-GAAATAACACGAGATCATATAGGAAAGT-AACTATAAAATGGAAAAAAGGCTGCAAATGA---TGCATCTA-------TGACAATTTACTAAGGAGG----AATA--------------AATTATTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65604 106 + 100774 AAGATCATTA-GAAATAACACAAGATCATATAGGAAAGT-AATTATAAAATGGAAAAA--GCTGCAAATGA---TGCATCTA-------TGACAATTTACTAAGGAGG----AATA--------------AATTATTA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 24528 106 - 218577 AAGATCATTA-GAAATAACACGAGATCATATAGGAAAGT-AACTATAAAATAGAAAAA--GCTGCAAATGA---TGTATCTA-------TGACAATTTACTAAGGAGG----AATA--------------AATTATTA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1402042 106 + 91010382 AAGATCATTA-GAAATAACACGAGATCATATAGGAAAGT-AATTATAAAATGGAAAAA--GCTGCAAATGA---CGTATCTG-------TGACAATTTACTATGGAGG----AATA--------------AATTATTA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 62200 106 + 74206 AAGATCATTA-GAAATAACACGAGATCATATAGGAAAGT-AACTATAAAATGGAAAAA--GCTGCAAATGA---TGTATCTA-------TGACAATTTACTAAGGAGG----AATA--------------AATTATTA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 796173 106 - 1687011 AAGATCATTA-GAAATAACACGAGATCATAGAGGAAAGT-AATTATAAAATGGAAAAA--GCTGCAAATGA---TGTATCTA-------TGACAATTTACTAAGGAGG----AATA--------------AATTATTA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204161317 106 + 204313951 AAAATCATTA-TAAATAACACATCATCATTCAGGAACGT-ACTTATAAAATGGAGAAA--GCTGCAAATGA---TGTATCCA-------TGACAACCTACTAAGGAGG----AATA--------------AATTATTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303450 106 + 16417988 AAGATCATTA-TAAATTACACAACATCATACAGGAAAAT-AATTGTAAAATGGAGAAA--GCTGCAAATGA---TGTATCCA-------TGACAACCTCCTAAGGAGG----AATA--------------AATTATTA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90557 106 - 306014 AAGATCATTA-TAAATAACACAACATCATACAGGAAAGT-AATTATAAAATGGAGAAA--GCTGCAAATGA---TGTATCCA-------TGACAACCTCCTAAGGAGG----AATA--------------AATTATTA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134231 106 - 211231 AAGATCATTA-TAAATAACACAACGTCATACAGGAAAGT-AATCATAAAATGGAGAAA--GCTGCAAATGA---TGTATCCA-------TGACAACCTACTAAGGAGG----AATA--------------AGTTATTA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2120813 118 - 2165740 AAGACCATTACCAGGTAACACAAGATCATATAGGAAAGT-AACCACAAAATGGAGAAA--ACTGCGAATGA---TAT---TA-------TGACTGTTTACTAAGAAGA----AATAAGAAATTTATAATGAACTATTA i otoGar3.GL873745 I 8 C 0 s mm10.chr13 74331861 105 + 120421639 AAGTTCACTG-TAAATA----------ATATAGAAAATC-AAATGTAAAATGGTAACAGTGCTTAGTATTA---TAGGTATAAGGGAATTAACATTCTATTGGTTATT----ACCA--------------AGTAAATG i mm10.chr13 C 0 C 0 s canFam3.chr34 11949379 105 + 42124431 -----CAGTA-AAAGTAACAAGAGATCATAAAGGAAAATAAATCCTAAACAGGGAAAA--GCTGCAAATGACATTGCATCCA-------CGACTATGTACCATGGAGG----GATC--------------AGTAAGTG i canFam3.chr34 I 7 C 0 s dasNov3.JH577625 362213 83 - 913073 --------------------------AAGATAGGAAAAG-AATTAAAACATG--AAAA--ACTGCAAAAGA---TGTATCTG-------TGACTATTTACTAAGGAAGAATTAATA--------------AACTATTA i dasNov3.JH577625 C 0 I 123 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1302966.000000 s hg38.chr3_KI270934v1_alt 120108 168 + 163458 AG---------------------------------------------------CCTCCT---------TCCATCCTC-CAGTGATAGAAATTTCAAGTGCAATTTAGCAAACAATACAGTACTTTCTGGAAGGAAACATCTGTCTCTTCC-TCTAAGATCTAAAGAGACAACTGCGAGATGGGCCCCATTGTCCCAGCCTTCTTTCCAGCTGTGGGAGAGAAGCCAGCAC s panTro5.chr3 2590484 168 - 202621043 AG---------------------------------------------------CCTCCT---------TCCATCCTC-CAGTGATAGAAATTTCAAGTGCAATTTAGAAAACAATACAGTACTTTCTTGAAGGAAACATCTGTCTCTTCC-TCTAAGATCTAAAGAGACAACTGTGAGATGGGCCCCATTGTCCCAGCCTTCTTTCCAGCTGTGGGAGAGAAGCCAGCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177723 168 - 190779 AG---------------------------------------------------CCTCCT---------TCCATCCTC-CAGTGATAGAAATTTCAAGTGCAATTTAGAAAACAATACAGTACTTTCTTGAAGGAAACATCTGTCTCTTCC-TCTAAGATCTAAAGAGACAACTGTGAGATGGGCCCCATTGTCCCAGCCTTCTTTCCAGCTATGGGAGAGAAGCCAGCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12714 168 + 880730 AG---------------------------------------------------CCTCCT---------TCCATCCTC-CAGTGATAGAAATTTCAAGTGCAATTTAGAAAACAATACAGTACTTTCTTGAAGGAAACATCTGTCTCTTCC-TCTGAGATCTAAAGAGACAACTGCGAGATGGGCCCCATTGTCCCAGCCTTCTTTCCAGCTGTGGGAGAGAAGCCAGCAC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841641 167 - 180051392 AG---------------------------------------------------CC-CCC---------TCCATCCTC-CAGTAATAGAAATTTAAAGTACAATCTAGAAAACAAGACAGAACTTTCTTGAAGAAAACATCTGTCTTTTCC-TCTACGATCTAAAGAGACAACTGCAAGGTGGGCCCCGTTGTCCCAGCCTTCTTTCCAGCTGTGGGAGGGCAGTCAGCAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310776 167 + 181584905 AG---------------------------------------------------CC-CCC---------TCCATCCTC-CAGTAATAGAAATTTAAAGTACAATCTAGAAAACAAGACAGAACTTTCTTGAAGAAAACATCTGTCTTTTCC-TCTACGATCTAAAGAGACAACTGCAAGGTGGGCCCCGTTGTCCCAGCCTTCTATCCAGCTGCGGGAGGGCAGCCAGCAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65710 167 + 100774 AG---------------------------------------------------CC-CTC---------TCCATCCTC-CAGTAATAGAAATTTAAAGTACAATCTAGAAAACAAGACAGAACTTTCTTGAAGAAAACATCTGTCTTTTCC-TCTACGATCTAAAGAGACAACTGCAAGGTGGGCCCCGTTGTCCCAGCCTTCTCTCCAGCTGCGGGAGGGCAGCCAGCAC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 24634 167 - 218577 AG---------------------------------------------------CC-CCC---------TCCATCCTC-CAGTAATAGAAATTTAAAGTACAATCTAGAAAACAAGACAGAACTTTCTTGAAGAAAACATCTGTCTTTTTC-TCTAAGATCTAAAGAGACAACTGCAAGGTGGGCCCCGTTGTCCCAGCCTTCTATCCAGCTGTGGGAGGGCAGCCAGCAC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1402148 167 + 91010382 AG---------------------------------------------------CC-CCC---------TCCATCCTC-CAGTAATAGAAATTTAAAATACAATCTAGAAAACAAGACAGTACTTTCTTGAAGAAAACATCTGTCTTTTCC-TCTAAGATCTAAAGAGAAAACTGCAAGGTGGGTCCCGTTGTCCCAGCCTTCTATCCAGCTGCGGGAGGGGAGCCAGCAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 62306 167 + 74206 AG---------------------------------------------------CC-CCC---------TCCATCCTC-CAGTAATAGAAATTTAAAGTACAATCTAGAAAACAAGACAGTACTTTCTTGAAGAAAACATCTGTCTTTTCC-TCTAAGATCTAAAGAGACAACTGCAAGGTGGGCCCCATTGTCCCAGCCTTCTATCCAGCTGTGGGAGGGGAGCCAGCAC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 796279 167 - 1687011 AG---------------------------------------------------CC-CCC---------TCCATCCTC-CAGTAATAGAAATTTAAAGTGCAATCTAGAAAACAAGACAGTACTTTCTTGAAGAAAACATCTGTCTTTTCC-TCTAAGATCTAAAGAGACAACTGCGAGGTGGGCCCCGTTGTCCCAGCCTTCTTTCCAGCTGTGGGAGGGGAGCCAGCAC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204161423 162 + 204313951 AC---------------------------------------------------CT-CCG---------TCCATCCTC-TGGT-----AAATTTAAAGTGCAATCTATGAAACAACACAGTACTTTCTGGAAGAAAATCTCTGTCTTTTCC-TCTAAGATCTAAAGAGACAACTGCAAGGTGGGCCCCACGGTCCCGGCCTTCTTTCCAGCTGTGGGAGAGGACCTGGCAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303556 159 + 16417988 AC---------------------------------------------------CT-CCG---------TCCATCCTC-TGAT-----AAATTTAAAGTGCAATCTATAAAACAACACAGTACTTTCTTGAAGAAAA--TCTGTCTTTTCC-TCT-AGATCTAAAGAGACAACTGCAAGGTGGGCCCCGCGGTCCCGGGCTTCTTTCCAGCTGTGGGAGAGGACCTGGCAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90663 160 - 306014 AC---------------------------------------------------CT-CCG---------TCCACCCTG-TGGT-----AAATTTAAAGTGCAATCTATAAAACAACACAGTACTTTCTTGAAGAAAA--TCTGTCTTTTCC-TCTAAGATCTAAAGAGACAACTGCAAGGTGGGCCCCACGGTCCCGGCCTTCTTTCCAGTTTTGGGAGAGGACCTGGCAC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134337 160 - 211231 AC---------------------------------------------------CT-CCC---------TCCATCCTC-TGGT-----GAATTTAAAGTGCAATCTATAAAACAACACAGTACTTTCTTGAAGAAAA--TCTGTCTTTTCC-TCTAAGATCTAAAGAGACAACTGCAAGGTGGGTCCCGCCGTCCCGGCCTTCTTTCCAGCTGTGGGAGAGGACCTGGCAC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2120931 148 - 2165740 AGGA-------------------------GTAAAAACTGAACTACAACC-AGCCT-CCC---------TCAACCCTC-CAGTAAGAATAATTTAAAGT-TAATCTGTCACACACCACAGTACTTTTTAAAAGAAAA----TATCTTTTTC-TCTAAAATCTTTAGTGAAAACTACAATGTGGGCC---------------------------------------TGGTAC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74331966 126 + 120421639 AA---------------------------------------------------AC-CCCAAAACATAACCTAGCCTCTCACTGCCTGGCAGGTATAGC---ATTTGATAACTACCATTACACTATC-------AAA--TGCACTGCATTC-TCTAAGCACTAAAGGGATTTTTGTCAAGT---------------AGCCTTGT------------------------CAC i mm10.chr13 C 0 C 0 s canFam3.chr34 11949484 211 + 42124431 ACCAGTGACTGCTCGCTATTAGAGTGAATGTGAACCCTGGAATATACCCGAGCCC-CGC---------TTTGCCCTC-CAGC---AGCAACTCAAGGG--AGTTGCCAACACAACACAGTGCTTTCT-GAGGAAACCATCTGTCTTCACTAACTGAGCTCGCAAGGGACAACTGTGAGATGGGCT-CATCATTCCTGCCCTATTCCCCACCATGGAAGGGT-CTGGGCTT i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 362296 123 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1017918.000000 s hg38.chr3_KI270934v1_alt 120276 69 + 163458 CATCACCTGCCCCTCGTAGCTGGTGGGAATGCCGTCCATGTTATAATGCACGGTGGGGAGGACAGGGAT s panTro5.chr3 2590652 69 - 202621043 CATCACCTGCCCCTCGTAGCTGGTGGGAATGCCGTCCATGTTATAATGCACAGTGGGGAGGACAGGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177891 69 - 190779 CATCACCTGCCCCTCGTAGCTGGTGGGAATGCCGTCCATGTTATAATGCACAGTGGGGAGGACAGGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12882 69 + 880730 CATCACCTGCCCCTCGTAGCTGGTGGGAATGCCGTCCATGTTATAATGCACGGTGGGGAGGACAGGGAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841808 69 - 180051392 CATCACCTGCCCCTTGTAGTTGGTGGGAATGCCGCCCATGTTATAATGCACGGTGGGGAGGACAGGGAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1310943 69 + 181584905 CATCACCTGCCCCTTGTAGTTGGTGGGAATGCCGCCCATGTTATAATGCACGGTGGGGAGGACAGGGAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65877 69 + 100774 CATCACCTGCCCCTTGTAGTTGGTGGGAATGCCGCCCATGTTATAATGCACGGTGGGGAGGACAGGGAT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 24801 69 - 218577 CATCACCTGCCCCTTGTAGTTGGTGGGAATGCCGCCCATGTTATAATGCACGGTGGGGAGGACAGGGAT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1402315 69 + 91010382 CATCACCTGCCCCTTGTAGTTGGTGGGAATGCCGCCCATGTTATAATGCACGGTGGGGAGGACAGGGAT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 62473 69 + 74206 CATCACCTGCCCCTTGTAGTTGGTGGGAATGCCGCCCATGTTATAATGCACGGTGGGGAGGACAGGGAT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 796446 69 - 1687011 CATCACCTGCCCCTTGTAGTTGGTGGGAATGCCGCCCATGTTATAATGCACGGTGGGGAGGACAGGGAT i colAng1.NW_012116910v1 C 0 M 6480 s calJac3.chr2 204161585 69 + 204313951 CATCACCTGTCCCTTGTAGTTGGTGGGAATGCCGCCCATGTTATAATGCACAGTGGGGAGCACAGGGAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303715 69 + 16417988 CATCACCTGCCCCTTGTAGTTGGTGGGAATGCCGCCCATGTTATAGTGCACGGTGGGGAGGACAGGGAT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90823 69 - 306014 CATCACCTGCCCCTTGTAGTTGGTGGGAATGCCGCCCATGTTATAGTGCACAGTGGGGAGGACAGGGAT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134497 69 - 211231 CATCACCTGCCCCTTGTAGTTGGTGGGAATGCCACCCATGTTATAGTGCACGGTGGGGAGGACAGGGAT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2121079 69 - 2165740 TGTCACCTGGCCCTTGTAGTTGGTGGGAATGCCACCCATGTTGTAGTGCACAGTGGGCAGCACAGGGAT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74332092 69 + 120421639 CATCACCTGTCCCTTGTAGTTAGTGGGAATCCCACCCATGTTGTAATGCACAGTGGGGAGGACTGGGAT i mm10.chr13 C 0 C 0 s canFam3.chr34 11949695 69 + 42124431 GGTCACCTGCCCCTTGTAGTTGGTGGGAATGCCACCCATGTTATAATGCACAGTGGGAAGGACGGGGAT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 362419 69 - 913073 CATCACCTGCCCCCGGTAGTTTGTGGGGATGCCGCCCATGTTGTAGTGCACAGTGGGGAGCACAGGGAT i dasNov3.JH577625 I 123 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=722878.000000 s hg38.chr3_KI270934v1_alt 120345 56 + 163458 CGGCTCCTTCGTGACGTCCACACCAGCGAAGATCATGGCTGTCTCTGAAATGCCGG s panTro5.chr3 2590721 56 - 202621043 CGGCTCCTTCGTGACGTCGACACCAGCGAAGATCATGGCTGTCTCTGAAATGCCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 177960 56 - 190779 CGGCTCCTTCGTGACGTCGACACCAGCAAAGATCATGGCTGTCTCTGAAATGCCGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 12951 56 + 880730 CGGCTCCTTCGTGACGTCCACACCAGCGAAGATCATGGCTGTCTCTGAAATGCCGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841877 56 - 180051392 CGGCTCCTTCGTGACGTCCACACCAGCGAAGATCATGGCTGTCTCTGAAATGCCGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1311012 56 + 181584905 CGGCTCCTTCGTGACGTCCACACCAGCGAAGATCATGGCTGTCTCTGAAATGCCGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65946 56 + 100774 CGGCTCCTTCGTGACGTCCACACCAGCGAAGATCATGGCTGTCTCTGAAATGCCGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 24870 56 - 218577 CGGCTCCTTCGTGACGTCCACACCAGCGAAGATCATGGCTGTCTCTGAAATGCCGG i cerAty1.NW_012004452v1 C 0 I 1269 s chlSab2.chr4 1402384 56 + 91010382 CGGCTCCTTCGTGACGTCCACATCAGCGAAGATCATGGCTGTCTCTGAAATGCCGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 62542 56 + 74206 CGGCTCCTTCGTGACGTCCACACCGGCGAAGATCATGGCTGTCTCTGAAATGCCGG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204161654 56 + 204313951 CGGCTCCTTCGTGACGTCCACGCCAGCAAAGATCATGGCTGTCTCCGAAATGCCAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303784 56 + 16417988 CGGCTCCTTCGTGACGTCCACGCCGGCAAAGATCATGGCTGTCTCTGAAATGCCAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90892 56 - 306014 CGGCTCCTTCGTGACGTCCACGCCAGCAAAGATCATGGCTGTCTCTGAAATGCCAG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134566 56 - 211231 CGGCTCCTTCGTGACGTCCACGCCAGCAAAGATCATGGCTGTCTCTGAAATGCCAG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2121148 56 - 2165740 TGGCTCCTTGGTGACATCCACACCAGCGAAGATCATGGCTGTCTCTGAAATCCCAG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74332161 56 + 120421639 GGGCTCCTTAGTGACATCCACACCAGCGAAGATCATGGCCGTCTCTGAAATTCCGG i mm10.chr13 C 0 C 0 s canFam3.chr34 11949764 56 + 42124431 TGGCTCCTTGGTGACATCCACACCGGCAAAGATCATGGCCGTCTCTGAAATGCCAG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 362488 56 - 913073 GGGCTCCTTGGTGACGTCCACGCCCGTGAAGACCATGGCCGTCTCAGAGATCCCGG i dasNov3.JH577625 C 0 C 0 e colAng1.NW_012116910v1 796515 6480 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=34022.000000 s hg38.chr3_KI270934v1_alt 120401 3 + 163458 GCA s panTro5.chr3 2590777 3 - 202621043 GCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178016 3 - 190779 GCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13007 3 + 880730 GCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841933 3 - 180051392 GCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1311068 3 + 181584905 GCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 66002 3 + 100774 GCA i macNem1.NW_012013899v1 C 0 M 545 s chlSab2.chr4 1402440 3 + 91010382 GCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 62598 3 + 74206 GCA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204161710 3 + 204313951 GGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303840 3 + 16417988 GCA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90948 3 - 306014 GCA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134622 3 - 211231 GCA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2121204 3 - 2165740 GCA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74332217 3 + 120421639 GTA i mm10.chr13 C 0 C 0 s canFam3.chr34 11949820 3 + 42124431 GCA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 362544 3 - 913073 GCA i dasNov3.JH577625 C 0 C 0 e colAng1.NW_012116910v1 796515 6480 - 1687011 M e cerAty1.NW_012004452v1 24926 1269 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=247700.000000 s hg38.chr3_KI270934v1_alt 120404 28 + 163458 AGGGCATGGCCAGCTGCTCTGGAGGTAG s panTro5.chr3 2590780 28 - 202621043 AGGGCATGGCCAGCTGCTCTGGAGGTAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178019 28 - 190779 AGGGCATGGCCAGCTGCTCTGGAGGTAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13010 28 + 880730 AGGGCATGGCCAGCTGCTCTGGAGGTAG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841936 28 - 180051392 GGCGCGTGGCCAGCTGCTCCGGAGGCAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1311071 28 + 181584905 GGCGCGTGGCCAGCTGCTCCGGAGGCAG i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1402443 28 + 91010382 GGCGCATGGCCAGCTGCTCCGGAGGCAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 62601 28 + 74206 GGCGCGTGGCCAGCTGCTCCGGAGGCAG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204161713 28 + 204313951 GGCGCGTGGCCAGCTGCTCTGGAGGCAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303843 28 + 16417988 GGCGCGTGGCCAGCTGCTCTGGAGGCAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90951 28 - 306014 GGCGCATGGCCAGCTGCTCTGGAGGCAG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134625 28 - 211231 GGCGCGTGGCCAGCTGCTCTGGAGGCAG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2121207 28 - 2165740 GGCGTGTGGCTAGCTGCGCAGGGGGTAG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74332220 28 + 120421639 GACGTGTGGCCAGTTGCTCAGGAGGCAG i mm10.chr13 C 0 C 0 s canFam3.chr34 11949823 28 + 42124431 GACGTATGGCCAACTGCTCGGGCGGTAG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 362547 28 - 913073 GGCGCATGGCGATCTGCTGCGGGGGCAG i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 66005 545 + 100774 M e colAng1.NW_012116910v1 796515 6480 - 1687011 M e cerAty1.NW_012004452v1 24926 1269 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=444069.000000 s hg38.chr3_KI270934v1_alt 120432 37 + 163458 GTGGTGCAGCTGCAGGTAGACGTGA--TCTTTCTCAGGG s panTro5.chr3 2590808 37 - 202621043 GTGGTGCAGCTGCAGGTAGACGTGA--TCTTTCTCAGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178047 37 - 190779 GTGGTGCAGCTGCAGGTAGACGTGA--TCTTTCTCAGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13038 37 + 880730 GTGGTGCAGCTGCAGGTAGACGTGA--TCTTTCTCAGGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179841964 37 - 180051392 GTGGTGCAGCTGCAGGTAGACGTGA--TCTTTCTCAGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1311099 37 + 181584905 GTGGTGCAGCTGCAGGTAGACGTGA--TCTTTCTCAGGG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 26195 39 - 218577 GTGGTGCAGCTGCAGGTAGACGTGAACTCTTTCTCAGGG i cerAty1.NW_012004452v1 I 1269 I 971 s chlSab2.chr4 1402471 37 + 91010382 GTGGTGCAGCTGCAGGTAGACGTGA--TCTTTCTCAGGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 62629 37 + 74206 GTGGTGCAGCTGCAGGTAGACGTGA--TCTTTCTCAGGG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204161741 37 + 204313951 GTGGTGCAGCTGCAGGTAGACGTGA--TCTTTCTCAGGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303871 37 + 16417988 GTGGTGCAGCTGCAGGTAGACGTGA--TCTTTCTCAGGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 90979 37 - 306014 GTGGTGCAGCTGCAGGTAGACGTGA--TCTTTCTCAGGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134653 37 - 211231 GTGGTGCAGCTGCAGGTAGACGTGA--TCTTTCTCAGGG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2121235 37 - 2165740 GTGGTGCAACTGTAGGTAGACGTGA--TCCTTCTCAGGG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74332248 37 + 120421639 ATGATGCAACTGCAGGTAGACGTGA--TCTTTCTCAGGG i mm10.chr13 C 0 C 0 s canFam3.chr34 11949851 37 + 42124431 GTGGTGCAACTGCAGGTACACATGG--TCTTTTTCGGGG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 362575 37 - 913073 GTGGTGCAACTGCAGGTAGACATGA--TCCTTTTCAGGG i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 66005 545 + 100774 M e colAng1.NW_012116910v1 796515 6480 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=182519.000000 s hg38.chr3_KI270934v1_alt 120469 21 + 163458 CCACAGCCTCTGGTAAGACAG-- s panTro5.chr3 2590845 21 - 202621043 CCACAGCCTCTGGTAAGACAG-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178084 21 - 190779 CCACAGCCTCTGGTAAGACAG-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13075 21 + 880730 CCACAGCCTCTGGTAAGACAG-- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179842001 21 - 180051392 CCACAGCCTCTGGGAAGACAG-- i rheMac8.chr6 C 0 I 415 s macFas5.chr6 1311136 21 + 181584905 CCACAGCCTCTGGGAAGACAG-- i macFas5.chr6 C 0 I 4 s chlSab2.chr4 1402508 21 + 91010382 CCACAGCCTCTGGGAAGACAG-- i chlSab2.chr4 C 0 I 232 s manLeu1.NW_012101728v1 62666 21 + 74206 CCACAGCCTCTGGGAAGACAG-- i manLeu1.NW_012101728v1 C 0 I 4 s calJac3.chr2 204161778 21 + 204313951 CCACAGCCTCTGGCAAGACAG-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303908 21 + 16417988 CCACAGCCTCTGGTAAGACAG-- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91016 21 - 306014 CCACAGCCTCTGGTAAGACAG-- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134690 21 - 211231 CCACAGCCTCTGGTGAGACAG-- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2121272 21 - 2165740 CCACAGCCTCTGGGAAAATGG-- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74332285 20 + 120421639 CCACAGCCTCTGCAAATACA--- i mm10.chr13 C 0 C 0 s canFam3.chr34 11949888 21 + 42124431 CCACAGCCTCTGGTGGAAAAG-- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 362612 23 - 913073 CCACAGCCTCTGGTAGCAGAAAA i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 66005 545 + 100774 M e colAng1.NW_012116910v1 796515 6480 - 1687011 M e cerAty1.NW_012004452v1 26234 971 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=32852.000000 s hg38.chr3_KI270934v1_alt 120490 4 + 163458 AACA s panTro5.chr3 2590866 4 - 202621043 AACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178105 4 - 190779 AACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13096 4 + 880730 AACA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179842437 4 - 180051392 AACA i rheMac8.chr6 I 415 C 0 s macFas5.chr6 1311161 4 + 181584905 AACA i macFas5.chr6 I 4 C 0 s chlSab2.chr4 1402761 4 + 91010382 AACA i chlSab2.chr4 I 232 C 0 s manLeu1.NW_012101728v1 62691 4 + 74206 AACA i manLeu1.NW_012101728v1 I 4 I 300 s calJac3.chr2 204161799 4 + 204313951 AACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303929 4 + 16417988 GACA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91037 4 - 306014 AACA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134711 4 - 211231 AACA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2121293 4 - 2165740 AACA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11949909 4 + 42124431 GACA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 362635 4 - 913073 AAGA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74332305 0 + 120421639 C e macNem1.NW_012013899v1 66005 545 + 100774 M e colAng1.NW_012116910v1 796515 6480 - 1687011 M e cerAty1.NW_012004452v1 26234 971 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=17807.000000 s hg38.chr3_KI270934v1_alt 120494 3 + 163458 CCA s panTro5.chr3 2590870 3 - 202621043 CCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178109 3 - 190779 CCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13100 3 + 880730 CCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179842441 3 - 180051392 CCG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1311165 3 + 181584905 CCA i macFas5.chr6 C 0 I 319 s chlSab2.chr4 1402765 3 + 91010382 CCG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 62995 3 + 74206 CCA i manLeu1.NW_012101728v1 I 300 C 0 s calJac3.chr2 204161803 3 + 204313951 CCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303933 3 + 16417988 CCA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91041 3 - 306014 CCA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134715 3 - 211231 CCA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2121297 3 - 2165740 TTA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11949913 3 + 42124431 TCA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 362639 3 - 913073 TGA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74332305 0 + 120421639 C e macNem1.NW_012013899v1 66005 545 + 100774 M e colAng1.NW_012116910v1 796515 6480 - 1687011 M e cerAty1.NW_012004452v1 26234 971 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=238381.000000 s hg38.chr3_KI270934v1_alt 120497 37 + 163458 TCACATAAGGCAGAGAATG-------------GCAACGGCAGCAGACCTG s panTro5.chr3 2590873 37 - 202621043 TCACATAAGGCAGAGAACG-------------GCAATGGCAGCAGACCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178112 37 - 190779 TCACATAAGGCAAAGAACG-------------GCAATGGCAGCAGACCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13103 37 + 880730 TCACATAAGGCAGAGAACG-------------GCAACGGCAGCAGACCTG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179842444 37 - 180051392 TCACATAAGGCAGAGAATG-------------GCAACGGCAGGAGACCTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1311487 37 + 181584905 TCACATAAGGCAGAGAACG-------------GCAACGGCAGGAGACCTC i macFas5.chr6 I 319 C 0 s chlSab2.chr4 1402768 37 + 91010382 TCACACAAGGCAGAGAACT-------------GCAACGGCAGGAGACGTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 62998 37 + 74206 TCACATAAGGCAGAGAACG-------------GCAACGGCAGGAGACCTG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204161806 37 + 204313951 CCACATAAGCCAGAGAACA-------------GTAATGGCAGGAAACCTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303936 37 + 16417988 CCACATAAGGCAGAGAACA-------------GTAATGGCAGGAAGCCTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91044 37 - 306014 CCACATAAGGCAGAGAACA-------------GTAATGGCAGGAAACCTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134718 37 - 211231 CCACGTAAGGCAGAGAACA-------------GTAACGGCAGGAAACCTG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2121300 37 - 2165740 TAACGTAAGGCACAGAATG-------------GTAAGCGTAGAAATTCTG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74332305 31 + 120421639 --ACATGAGGCAAAGAATG-------------GTAA----GAAAGAGCTA i mm10.chr13 C 0 C 0 s canFam3.chr34 11949916 37 + 42124431 TGGTGTGAGGCAAAGAATG-------------GTAATTACAGAAAATATG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 362642 50 - 913073 CAAAATAAGGCAAAAAATATTACAAGTCACATTTAATTATAAAAAAATTG i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 66005 545 + 100774 M e colAng1.NW_012116910v1 796515 6480 - 1687011 M e cerAty1.NW_012004452v1 26234 971 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=369490.000000 s hg38.chr3_KI270934v1_alt 120534 55 + 163458 AGAATACGTCATCTTGGAAGCGTGTGAGTTTCAACA-TGTTTTGATACTGAGGAAA s panTro5.chr3 2590910 55 - 202621043 AGAATACGTCATCTTGGAAGCGTGTGAGTTTCAACA-TGTTTTGATACTGAGGAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178149 55 - 190779 AGAATACGTCATCTTGGAAGCGTGTGAGTTTCAACA-TGTTTTGATACTGAGGAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13140 55 + 880730 AGAATAAGTCATCTTTGAAGCGTGTGAGTTTCAACA-TGTTTTGATATTGAGGAAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179842481 55 - 180051392 AGAATACGTCATCTTGGAAGCATGTGAGTTTCAATA-TGTTTTGATACTGAGGAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1311524 53 + 181584905 AGAATACGCCATCTTGGAAGCATGTGAGTTTCA--A-TGTTTTGATACTGAGGAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 66554 55 + 100774 AGAATACGTCATCTTGGAAGCATGTGAGTTTCAATA-TGTTTTGATACTGAGGAAA i macNem1.NW_012013899v1 M 545 C 0 s chlSab2.chr4 1402805 55 + 91010382 AGAATACGTCATCTTGGAAGCATGTGAGTTTCAACA-TGTTTTGATACTGAGGAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 63035 55 + 74206 AGAATACGTCATCTTGGAAGCGTGTGAGTTTCAACA-TGTTTTGATACTGAGGAAA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204161843 53 + 204313951 AGACTACGTCATCATGGAAGC--GTGAGCTTCCACA-TTTTCTGATACTAAGGAAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16303973 43 + 16417988 AGAC-----------GGAAGC--GTGAGTTTCCACATTTTTTTGATACTGAGGAAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91081 53 - 306014 AGACTACGTCATCACGGAAGC--GTGAGTTTCCACA-TTTTTTGATACTGAGGAAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134755 53 - 211231 AGACTACGTCATCACGGAAGC--GCGAGTTTCCACA-TTTTTTGATACTGAGGAAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2121337 54 - 2165740 AGAATACAAAATCATCGAAACATGTAAGTTTCAACA-T-TTTTGACACTAAAAAAA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74332336 42 + 120421639 AGATCAC-------------TATGTTAGACTGAACA-ATCTTTGATCTTGAGGAAA i mm10.chr13 C 0 C 0 s canFam3.chr34 11949953 54 + 42124431 AGATTACGAAGTCACTGAAGCATATAAAGTTCCAC--TGTTCTTATGCTGTACAGA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 362692 54 - 913073 AGATTACAAAATCAT-AAAGCACATAAGGGCCAAGA-TTCTTTGATACTGGTAAAA i dasNov3.JH577625 C 0 I 332 e colAng1.NW_012116910v1 796515 6480 - 1687011 M e cerAty1.NW_012004452v1 26234 971 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=786078.000000 s hg38.chr3_KI270934v1_alt 120589 102 + 163458 ATTTC-CCC-TCATGTACGGCCACCCTCtcatcaaatcttttct-----aagcatctact-------gtatgccagggacaatcccaggtgctgggacacagctgagaaccagaac s panTro5.chr3 2590965 102 - 202621043 ATTTC-CCC-TCGTGTACGGCCACCCTCtcatcaaatcttttct-----aagcatctact-------gtgtgccagggacaatcccaggtgctgggacacagctgagaaccagaac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178204 102 - 190779 ATTTC-CCC-TCGTGTACGGCCACCCTCtcatcaaatcttttct-----aagcatctact-------gtgtgccagggacaatcccaggtgctgggacacagctgagaaccagaac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13195 102 + 880730 ATTTC-CCC-TCATGTACGACCACCCTCtcatcaaatcttttct-----aagcatctagt-------gtgtgccagggacaatcctaggtgctgggacacagctgagaaccagaac i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179842536 102 - 180051392 ATTTC-CCC-TCATTTATGCtcaccctctcatcaaatcttttct-----aagcatctact-------gtgtgccagggacaatcctaggtgctgggacacagctgagacccagaac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1311577 102 + 181584905 ATTTC-CCC-TCATTTATGCtcaccctctcatcaaatcttttct-----aagcatctact-------gtgtgccagggacaatcctaggtgctgggacacagctgagacccagaac i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 66609 101 + 100774 ATTTC-CCC-TCATTTATGCtcaccctctcatcaaatc-tttct-----aagcatctact-------gtgtgccagggacaatcctaggtgctgggacacagctgagacccagaac i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1402860 102 + 91010382 ATTTC-CCC-TCATTTATGGTCGCCCTCtcatcaaatctttcct-----aagcatctact-------gtgtgccagggaccatcctaggtgctgggacacagctgagacccagaac i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 63090 102 + 74206 ATTTC-CCC-TCATTTATGCtcaccctctcatcaaatcttttct-----aagcatctact-------gtgtgcaaaggacaatcctaggtgctgggacacagctgagacccagaac i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204161896 102 + 204313951 ATTTC-CCC-TCATGTATGCCCACCCTCtcatcgaatcttttct-----aaatgtctact-------ctgtgccagggacaatcctaggtgctgggacacagctgagaaccagaac i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16304016 102 + 16417988 ATTTC-CCC-TCATGTATGGCCACCCTCtcatcaaatcttttct-----aaatgtctcct-------ctgtgccagggacaatcctaggtgctgggacacagctgagaaccagaac i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91134 102 - 306014 ATTTC-CCC-TCATGTATGGCCACCCTCtcatcaaatcttttct-----aaatgtctact-------ctgtgccagggacaatcctaggtgcttggacacagctgagaaccagaac i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134808 102 - 211231 ATTTC-CGC-TCGTGTACGGCCACCCTCTCGTcaaatcttttct-----aaatgtctgct-------ctgtgccaggggcaatcctaggtgctgggacacagctgagaaccagaac i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2121391 103 - 2165740 ATCTC-CCCTTCACTTATGGtcactcttacatcaaatcttttct-----gagcatctact-------gcacaacagggatgatactaggtgctgggtcatggccaagaacaggaac i otoGar3.GL873745 C 0 I 260 s mm10.chr13 74332378 105 + 120421639 ATGTCACCT-TCATCTATGGTCAGTGTCCCATTGATACTTTTTTCCTTCAGGTACTTGTTAATCATAGTGTGTCA-GAACACTTCTGTGAA---GGACACAGCCAAGAAC------ i mm10.chr13 C 0 C 0 s canFam3.chr34 11950007 99 + 42124431 ATCTC-TCC-TCACTTGTGGCcatccatttctcacctcatttct-----gagcacctacc-------atgtgccagggtggag--tatgtgctgggacacacct-aggactgggac i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 362746 332 - 913073 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e cerAty1.NW_012004452v1 26234 971 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=507747.000000 s hg38.chr3_KI270934v1_alt 120691 77 + 163458 aaaaactctgcccttactgaactcaca--ctc--GTCTCAGGGA-TCACAGCCTGCAGCGGCTGTCCTTGGTAAAAGCATT----A s panTro5.chr3 2591067 77 - 202621043 aaaaactctgcccttactgaactcaca--ctc--GTCTCAGGGA-TCACAGGCTGCAGCGGCTGTCCTTGGTAAAAGCATT----A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178306 77 - 190779 aaaaactctgcccttactgaactcaca--ctc--GTCTCAGGGG-TCACAGCCTGCTGCGGCTGTCCTTGGTAAAAGCATT----A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13297 77 + 880730 aaaaactctgcccttactgaactcaca--ctc--GTCTCAGGGA-TCACAGCCTGCTGCGGCTGTCCTTGGTAAGAGCATT----A i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179842638 81 - 180051392 aaaaactctgccctccctgaactcaca--ctc--GTCTCAGGGA-TCACAGCCTGCTGCGGCTGTCCTTGGTAAGTGCATTAGAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1311679 81 + 181584905 aaaaactctgccctccctgaactcaca--ctc--GTCTCAGGGA-TCACAGCCTGCTGCGGCTGTCCTTGGTAAGTGCATTAGAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 66710 81 + 100774 aaaaactctgccctccctgaactcaca--ctc--GTCTCAGGGA-TCACAGCCTGCTGCGGCTGTCCTTGGTAAGTGCATTAGAAA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1402962 65 + 91010382 aaa----------------aactcaca--ctc--atctcaggga-tcacagcctgctgcggCTGTCCTTGGTAAGTGCATTAGAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 63192 81 + 74206 aaaaactctgccctccctgaactcaca--ttc--ATCTCAGGGA-TCACAGCCTGCTGCGGCTGTCCTTGGTAAGTGCATTAGAAA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204161998 79 + 204313951 aaaaactctgccctcactgaactcacg--ttT--GTCTTGGGGA-TCACAACCTGCT--GGTTGTCCTTGGTAATGGCATCACAAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16304118 81 + 16417988 aaaaaccctgccctcactgaactcaca--ctT--GTCTTGGGGC-TCACAGCCTGCTGCGGCTGTCCTCGGTAATTGCATCACAAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91236 79 - 306014 aaaaa--ctgccctcactgaactcaca--ctt--gtcttggggC-TCACAGCCTGCTGTGGCTGTCCTTGGTAACTGTATCACAAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134910 81 - 211231 aaaaactctgccctcactgaactcaca--ctT--GTCTCGGGGA-TCACAGCCTGCTGCGGCTGTCCTTGGTAACTGCATCAGAAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2121754 77 - 2165740 AAAAACCCTGCCCTCACTGAATTCACA--CTCCAGTCTTAGGGA-T--CAGTTTGCTAC-CTTTTCCTTAGTAAATGCATT---AA i otoGar3.GL873745 I 260 C 0 s mm10.chr13 74332483 74 + 120421639 --AGAGCCTATACTCACCAATCTTACATCCTT--GCCTCGGGTA-CTACGATTTCCT---GTTTTCCTTGGTAAATATATTA---- i mm10.chr13 C 0 I 42 s canFam3.chr34 11950106 74 + 42124431 agacatccagccgtcgctaggctcata--ctctagtATCAGAAAGTTACAATGT------GTTTTCCTTGATAAATGCATTA---- i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 362746 332 - 913073 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e cerAty1.NW_012004452v1 26234 971 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=16170.000000 s hg38.chr3_KI270934v1_alt 120768 2 + 163458 GG s panTro5.chr3 2591144 2 - 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178383 2 - 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13374 2 + 880730 GG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179842719 2 - 180051392 GG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1311760 2 + 181584905 GG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 66791 2 + 100774 GG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1403027 2 + 91010382 GG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 63273 2 + 74206 GG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204162077 2 + 204313951 GG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16304199 2 + 16417988 GG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91315 2 - 306014 GG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134991 2 - 211231 GG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2121831 2 - 2165740 GT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11950180 2 + 42124431 AG i canFam3.chr34 C 0 I 15 e mm10.chr13 74332557 42 + 120421639 I e dasNov3.JH577625 362746 332 - 913073 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e cerAty1.NW_012004452v1 26234 971 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=551575.000000 s hg38.chr3_KI270934v1_alt 120770 82 + 163458 CCTCTATGCCAA--ATagtcgtccctgcgtatccgtggcaggttgggtccaggac-ccccacggacaccaaaatccgtggatgct s panTro5.chr3 2591146 82 - 202621043 CCTCTATGCCAA--ATagtcgtccctgcgtatccgtggcaggttgggtccaggac-ccccacggataccaaaatccgtggatgct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178385 82 - 190779 CCTCTATGCCAA--ATagtcgtccctgcgtatccgtggcaggttgggtccaggac-ccccacggataccaaaatccgtggatgct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13376 82 + 880730 CCTCTATGCCAA--ATagtcatccctgcgtatccgtggcaggttgggtccaggac-ccccacggataccaaaatccgtggatgct i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179842721 84 - 180051392 GCTCTATGCCAAACAcaatcgtccctgcgtatctgtggcaggttgggtccaggac-ccccatggatactaaaatccgtggatgct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1311762 84 + 181584905 GCTCTATGCCAAACAcaatcgtccctgcgtatccgtggcaggttgggtccaggac-ccccatggatactaaaatccgtggatgct i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 66793 84 + 100774 GCTCTATGCCAAACAcaatcgtccctgcgtatctgtggcaggttgggtccaggac-ccccatggatactaaaatccgtggatgct i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1403029 84 + 91010382 GCTCTATGCCAAACAcagtcgtccctgcgtatccgtggcaggttgggtccaggac-ccccatggatactaaaatccgtggatgct i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 63275 84 + 74206 GCTCTATGCCAAACAcaatcgtccctgcgtatctgtggcaggttgggtccaggac-ccccatggataccaaaatctgtagatgct i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204162079 82 + 204313951 CCTCTATACCAA--ATagtcatccctgtgtatccatggcagactggctccaggac-ccccatggataccaaaatctgtggatgtt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16304201 82 + 16417988 CCTCTATACCAA--ATagtcgtccctgtgtatccatggcagtctggctccaggac-ccccatggataccagaatctgtggatgtt i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91317 82 - 306014 CCTCTATACCAA--ATagtcgtccctgtgtatccatggcagactggctccaggac-ccccatggataccagaatctgtggatgtt i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 134993 82 - 211231 CCTCTATACCGA--ATagtcgtccctgtgtacccatggcagactggctccaggac-ccccacggacaccagaatctgtggatgct i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2121833 83 - 2165740 TCTCTATGACAA--ATagttatccctctgtgtccatgatgaattgattttaggacttcctacggactgaaaaatctatagatgct i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74332557 42 + 120421639 I e dasNov3.JH577625 362746 332 - 913073 I e canFam3.chr34 11950182 15 + 42124431 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e cerAty1.NW_012004452v1 26234 971 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=533576.000000 s hg38.chr3_KI270934v1_alt 120852 90 + 163458 c-aagtccctaatataaaatggcagagtatttgcatataacctatgcacat---cctcctccatattttaaa-----tcat-cctcatttcaagttttac s panTro5.chr3 2591228 89 - 202621043 c-aagtccctaatataaaatgggagagtatttgcatataacctacgcacat---cctcctccatatttcaaa------cat-cctcatttcaagttttac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178467 89 - 190779 c-aagtccctaatataaaatgggagagtatttgcatataacctatgcacat---ccccctccatatttcaaa------cat-cctcatttcaagttttac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13458 90 + 880730 c-aagtccctaatataaaatgggagagtatttgcatataacctatgcacat---cctcctccatattttaaa-----tcat-cctcatttcaagttttac i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179842805 90 - 180051392 c-aagtccctaatataaaatggaagagtatttgtatataacctatgcacat---cctcctctatactttaca-----tcat-cctcatttaaagttttac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1311846 90 + 181584905 c-aagtccctaatataaaatggaagagtatttgtatataacctatgcacat---cctcctctatactttaca-----tcat-cctcatttaaagttttac i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 66877 90 + 100774 c-aagtccctaatataaaatggaagagtatttatatataacctatgcacat---cctcctctatactttaca-----tcat-cctcatttaaagttttac i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1403113 90 + 91010382 c-aagtccctaatataaaatggaagagtatttgtatgtaacctatgcacat---cctcctctatactttaca-----tcat-cctcatttcaagttttac i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 63359 90 + 74206 c-aagtccctaatataaaatggaagagtatttatatataacctatgcacat---cctcctctatactttaca-----tcat-cctcatttaaagttgtac i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204162161 89 + 204313951 t---gtctctaatatgaaatgggagagtatctgcatataacctatgcacat---cctcctccagactttaaa-----tcatccctcacttaaagctgtac i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16304283 94 + 16417988 c-aagtctctaatacaaaaggggagagtatctgcatataacctatgcacatccgccgcctccagactttaaa-----tcatccctcatttaaagctgtac i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91399 92 - 306014 caaagtctctaatacaaaaggggagagtatctgcatatagcctatgcacat---cctcctccagactttaaa-----tcatccctcatttaaagctatac i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 135075 91 - 211231 c-aagtccctaatataaaatgggagagtatctgcatataacccatgcacat---cctcctccagactttaaa-----tcatccctcacttaaagctgcac i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2121916 65 - 2165740 c-aagtcct--gtataaaataagataatatttacctataatcta-gcatat---actact---------gaa-----acat-cccta------------- i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 363078 85 - 913073 C-AAATTCTTTCTCTAGAAGAAAACAGTATTTGAATGT----------CAT---TCTCACCCAGAATCTAGAAATGGtcac-tcacacatcaaatgtttt i dasNov3.JH577625 I 332 I 174 e mm10.chr13 74332557 42 + 120421639 I e canFam3.chr34 11950182 15 + 42124431 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e cerAty1.NW_012004452v1 26234 971 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=655955.000000 s hg38.chr3_KI270934v1_alt 120942 104 + 163458 atttaagttgtacagcaactccaggattactcatagtacctaatacaatgtaaatgctaggtaaatagctgctacactgtgttgcttagcgaacaatgacaagg s panTro5.chr3 2591317 104 - 202621043 atttaagttgtacagcaactccaggatgactcatagtacctaatacaatgtaaatgctaggtaaatagctgctacactgtgttgcttagcgaacaatgacaagg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178556 104 - 190779 atttaagttgtacagcaactccaggatgactcatagtacctaatacaatgtaaatgctaggtaaacagctgctacactgtgttgcttagcgaacaatgacaagg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13548 104 + 880730 atttaagttttacagcaactccaggattactcatagtacctaatacaatgtaaatgctaggtaaatagctgctacactgtgttgtctagcgaacaatgacgagg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179842895 104 - 180051392 atttaagctttacaacaactccaggattactcacagtacctaatacaatgtaaatactacgtaaatagttgttgaactgtgttgtttagggaacaatgacgagg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1311936 104 + 181584905 atttaagctttacaacaactccaggattactcacagtacctaatacaatgtaaatgctacgtaaatagttgttaaactgtgttgtttagggaacaatgacgggg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 66967 104 + 100774 atttaagctttacaacaactccaggattactcacagtacctaatacaatgtaaatactacgtaaatagttgttaaactgtgttgtttagggaacaatgacgagg i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1403203 104 + 91010382 atttaagctttacaacaactccaggattactcacagtacctaatataatgtaaatgctacgtaaatagttgttaaactgtgttgtttagggaacaatgacgggg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 63449 104 + 74206 atttaagctttacaacaactccaggattactcacagtacctaatacaatgtaaatactacgtaaatagttgttaaactgtgttgtttagggaacaatgacgagg i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204162250 104 + 204313951 acttcagttttgcgacaactccaggattactcatagtacctaacgcaatgtaaatgctatataagtagttgtcatgctgtgttgtttaaggaacaatgacaagg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16304377 104 + 16417988 atttcagttttaggacaactccaggattgctcacagtacctaatgcaatgtaaatgctatgtaaatagttgtcatgctgtgttgtttagggaacaatgacaagg i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91491 104 - 306014 atttcggttttaggacaactccaggattactcacagtacctaacgcaatgtaagtgctatgtaaatagctgtcatgctgtgctgtttaggggacaatgacaagg i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 135166 104 - 211231 atttcagctttacgacaactccaggattactcgtagcacctgacgcaatgcaaatgccatgtaaatagctgtcgtgctgtgttgtttcgggaacaatgacaagg i aotNan1.NW_018494784v1 C 0 I 10 s otoGar3.GL873745 2121981 76 - 2165740 ------------------------gattacttatgacacttaatacaatgtaaatcccatgtaaatagttgttacattactttgtctaggcagtaatgac---- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74332557 42 + 120421639 I e dasNov3.JH577625 363163 174 - 913073 I e canFam3.chr34 11950182 15 + 42124431 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e cerAty1.NW_012004452v1 26234 971 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=92216.000000 s hg38.chr3_KI270934v1_alt 121046 22 + 163458 aaaaaaaaaagtctgcgtgttt--- s panTro5.chr3 2591421 20 - 202621043 --aaaaaaaagtctgcgtattt--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178660 19 - 190779 ---aaaaaaagtctgcgtattt--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13652 22 + 880730 aaaaaaaaaagtctgcgtattt--- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179842999 19 - 180051392 ---aaaaaaagtctgcatattt--- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1312040 19 + 181584905 ---aaaaaaagtctgcatattt--- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 67071 19 + 100774 ---aaaaaaagtctgcatattt--- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1403307 19 + 91010382 ---aaaaaaagtctgcatattt--- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 63553 19 + 74206 ---aaaaaaagtctgcatattt--- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204162354 18 + 204313951 ----aaaaaagtctgcatgttc--- i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 16304481 18 + 16417988 ----aaaaaagtctgcatgttc--- i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 91595 18 - 306014 ----aaaaaagtctgcatgttc--- i cebCap1.NW_016108150v1 C 0 I 1 s otoGar3.GL873745 2122057 23 - 2165740 --caaaaaaagtctgtacatcatca i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74332557 42 + 120421639 I e aotNan1.NW_018494784v1 135270 10 - 211231 I e dasNov3.JH577625 363163 174 - 913073 I e canFam3.chr34 11950182 15 + 42124431 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e cerAty1.NW_012004452v1 26234 971 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=523699.000000 s hg38.chr3_KI270934v1_alt 121068 82 + 163458 gtaaggatgcaattttattttcagtacatagttggttgaaaccacacatgtggaaccgatggatacggagggccACC-ATATT s panTro5.chr3 2591441 82 - 202621043 gtaaggatgcaattttattctcagtacatagttggttgaaaccacacatgtgaaacagatagatacggagggccACC-ATATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178679 82 - 190779 gtaaggatgcaattttattctcagtacatagttggttgaaaccacacatgtggaaccgatggatacggagggccACC-ATATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13674 82 + 880730 gtaaggatgcaattttattttcaatacatagttggttgaaaccacacatgtggaaccgatggatacggagggccACC-ATATT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179843018 82 - 180051392 gtaaggttgcaattttactttcaatacatagctggttgaaaccacacatgtggaaccaacgggtacagacggccACC-ATATT i rheMac8.chr6 C 0 I 337 s macFas5.chr6 1312059 82 + 181584905 gtaaggttgcaattttactttcaatacatagctggttgaaaccacacatgtggaaccaacgggtacagacggccACC-ATATT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 67090 82 + 100774 gtaaggttgcaattttactttcaatacatagctggttgaaaccacacatgtggaaccaacgggtacagacggccACC-ATATT i macNem1.NW_012013899v1 C 0 I 337 s chlSab2.chr4 1403326 82 + 91010382 gtaaggttgcaattttactttcaatacatagctggttgaaaccacacatgtggaaccaacgggtacagacggccATC-ATATT i chlSab2.chr4 C 0 I 2144 s manLeu1.NW_012101728v1 63572 82 + 74206 gtaaggttgcaattttactttcaatacatagctggttgaaaccacacatgtggaaccaacaggtacagacggccACC-ATATT i manLeu1.NW_012101728v1 C 0 I 332 s calJac3.chr2 204162373 81 + 204313951 gtaaggatacaactgtatctccaacacatagttggttgaaaccacacatgtggaacccatggatatggagggccACC-ATAT- i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 16304500 81 + 16417988 gtaaggatacaattgtattttcaacacatagttggttgaaaccacacatgtggaaccgatggatatggagggccACC-ATAT- i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 91614 81 - 306014 gtaaggatacaattgtattttcaacacatagttggttgaaaccacacatgtggaacccatggatatggagggccACC-ACAT- i cebCap1.NW_016108150v1 I 1 C 0 s aotNan1.NW_018494784v1 135280 81 - 211231 gtaaggatacagctgtatgttcagcacgtagttggctgaaaccacacatgtggaacccatggatatgcagggccACC-ATAT- i aotNan1.NW_018494784v1 I 10 C 0 s otoGar3.GL873745 2122080 83 - 2165740 gtaaagatgcaattttattttgtttttatggttggttaaatccatagatgtggaacccacggatatggaCAGATATCTGTACT i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74332557 42 + 120421639 I e dasNov3.JH577625 363163 174 - 913073 I e canFam3.chr34 11950182 15 + 42124431 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e cerAty1.NW_012004452v1 26234 971 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=12420.000000 s hg38.chr3_KI270934v1_alt 121150 6 + 163458 ACAAGA s panTro5.chr3 2591523 6 - 202621043 ACAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178761 6 - 190779 ACAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13756 6 + 880730 ACAAAA i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 1312141 6 + 181584905 CCAGAA i macFas5.chr6 C 0 C 0 s calJac3.chr2 204162454 5 + 204313951 -CCAAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16304581 5 + 16417988 -CCAAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91695 5 - 306014 -CCAAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 135361 5 - 211231 -CCAAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2122163 5 - 2165740 -CTAAA i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74332557 42 + 120421639 I e dasNov3.JH577625 363163 174 - 913073 I e macNem1.NW_012013899v1 67172 337 + 100774 I e canFam3.chr34 11950182 15 + 42124431 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e manLeu1.NW_012101728v1 63654 332 + 74206 I e chlSab2.chr4 1403408 2144 + 91010382 I e cerAty1.NW_012004452v1 26234 971 - 218577 I e rheMac8.chr6 179843100 337 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=44901.000000 s hg38.chr3_KI270934v1_alt 121156 14 + 163458 AACCATCCGACTTC s panTro5.chr3 2591529 14 - 202621043 AACCATCTGACTTC i panTro5.chr3 C 0 I 2 s panPan2.chrUn_NW_014024201v1 178767 14 - 190779 AACCATCTGACATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13762 14 + 880730 AACCATCTGACTTC i gorGor5.CYUI01015759v1 C 0 I 2 s macFas5.chr6 1312147 14 + 181584905 AAACATTTGACttc i macFas5.chr6 C 0 C 0 s calJac3.chr2 204162459 13 + 204313951 AACCATTT-ACTTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16304586 14 + 16417988 AACCATTTGACTTC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91700 14 - 306014 AACCATTTGACGTC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 135366 14 - 211231 AACCGTTTGACTTC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2122168 14 - 2165740 AAGCCACTGACTTC i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 363337 14 - 913073 AACCATTTGTCTTC i dasNov3.JH577625 I 174 C 0 e mm10.chr13 74332557 42 + 120421639 I e macNem1.NW_012013899v1 67172 337 + 100774 I e canFam3.chr34 11950182 15 + 42124431 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e manLeu1.NW_012101728v1 63654 332 + 74206 I e chlSab2.chr4 1403408 2144 + 91010382 I e cerAty1.NW_012004452v1 26234 971 - 218577 I e rheMac8.chr6 179843100 337 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1488.000000 s hg38.chr3_KI270934v1_alt 121170 2 + 163458 TT s panTro5.chr3 2591545 2 - 202621043 TT i panTro5.chr3 I 2 C 0 s panPan2.chrUn_NW_014024201v1 178781 1 - 190779 -T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13778 2 + 880730 TT i gorGor5.CYUI01015759v1 I 2 C 0 s macFas5.chr6 1312161 2 + 181584905 tc i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1405552 2 + 91010382 TT i chlSab2.chr4 I 2144 C 0 s otoGar3.GL873745 2122182 1 - 2165740 -T i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 363351 2 - 913073 CC i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74332557 42 + 120421639 I e aotNan1.NW_018494784v1 135380 0 - 211231 C e macNem1.NW_012013899v1 67172 337 + 100774 I e saiBol1.JH378155 16304600 0 + 16417988 C e calJac3.chr2 204162472 0 + 204313951 C e cebCap1.NW_016108150v1 91714 0 - 306014 C e canFam3.chr34 11950182 15 + 42124431 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e manLeu1.NW_012101728v1 63654 332 + 74206 I e cerAty1.NW_012004452v1 26234 971 - 218577 I e rheMac8.chr6 179843100 337 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=9090.000000 s hg38.chr3_KI270934v1_alt 121172 1 + 163458 T s panTro5.chr3 2591547 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178782 1 - 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13780 1 + 880730 T i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179843437 1 - 180051392 T i rheMac8.chr6 I 337 C 0 s macFas5.chr6 1312163 1 + 181584905 t i macFas5.chr6 C 0 I 315 s macNem1.NW_012013899v1 67509 1 + 100774 T i macNem1.NW_012013899v1 I 337 C 0 s cerAty1.NW_012004452v1 27205 1 - 218577 T i cerAty1.NW_012004452v1 I 971 C 0 s chlSab2.chr4 1405554 1 + 91010382 T i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 63986 1 + 74206 T i manLeu1.NW_012101728v1 I 332 C 0 s calJac3.chr2 204162472 1 + 204313951 T i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16304600 1 + 16417988 T i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91714 1 - 306014 T i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 135380 1 - 211231 T i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2122183 1 - 2165740 C i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 363353 1 - 913073 T i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74332557 42 + 120421639 I e canFam3.chr34 11950182 15 + 42124431 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=125658.000000 s hg38.chr3_KI270934v1_alt 121173 14 + 163458 -TTTTTTTAATATAA s panTro5.chr3 2591548 14 - 202621043 -TTTTTTTAATATAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178783 14 - 190779 -TTTTTTTAATATAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13781 14 + 880730 -TTTTTTTAATATAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179843438 14 - 180051392 -TTTTTTAAATATAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1312479 14 + 181584905 -TTTTTTAAATATAA i macFas5.chr6 I 315 C 0 s macNem1.NW_012013899v1 67510 14 + 100774 -TTTTTTAAATATAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 27206 14 - 218577 -TTTTTTAAATATAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1405555 14 + 91010382 -TTTTTTTAATATAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 63987 14 + 74206 -TTTTTTAAATATAA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204162473 14 + 204313951 -TTTTTTAAATATAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16304601 14 + 16417988 -TTTTTTAAATATAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91715 14 - 306014 -TTTTTTAAATATAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 135381 14 - 211231 -TTTTTTAAATATAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2122184 14 - 2165740 -TTCTTTTAATATAA i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 363354 15 - 913073 TCATTATTTATATAA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74332557 42 + 120421639 I e canFam3.chr34 11950182 15 + 42124431 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=203037.000000 s hg38.chr3_KI270934v1_alt 121187 23 + 163458 AAATGTAAAACCTCTAAAGGCCA-- s panTro5.chr3 2591562 22 - 202621043 AAACGTAAAACCTCTAAAGGCC--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178797 22 - 190779 AAATGTAAAACCTCTAAAGGCC--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13795 22 + 880730 AAATGTAAAACCTCTAAAGGCC--- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179843452 22 - 180051392 AAATGTAAAACCTCTAAGGGCC--- i rheMac8.chr6 C 0 I 1 s macFas5.chr6 1312493 22 + 181584905 AAATGTAAAACCTCTAAAGGCC--- i macFas5.chr6 C 0 I 1 s macNem1.NW_012013899v1 67524 22 + 100774 AAATGTAAAACCTCTAAAGGCC--- i macNem1.NW_012013899v1 C 0 I 1 s cerAty1.NW_012004452v1 27220 22 - 218577 AAATGTAAAACCTCCAAAAGCC--- i cerAty1.NW_012004452v1 C 0 I 11 s chlSab2.chr4 1405569 22 + 91010382 AAATGTAAAACCTCTAAAGGCC--- i chlSab2.chr4 C 0 I 1 s manLeu1.NW_012101728v1 64001 22 + 74206 AAATGTAAAACCTCCAAAAGCC--- i manLeu1.NW_012101728v1 C 0 I 11 s calJac3.chr2 204162487 22 + 204313951 AAATGTGAAACCTCTAAAGGCC--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16304615 22 + 16417988 AAATGTGAAACCTCTAAAGGCC--- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91729 22 - 306014 AAATGTGAAACCTCTAAAGGCC--- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 135395 22 - 211231 AAATGTGAAACCTCTGAAGGCC--- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2122198 21 - 2165740 AAATGT-AACTCTCTAAAGGCC--- i otoGar3.GL873745 C 0 I 1 s canFam3.chr34 11950197 22 + 42124431 AAATAGAAAGTATCTAGAGGCT--- i canFam3.chr34 I 15 I 1 s dasNov3.JH577625 363369 24 - 913073 AATTGTAAAATTTCTTAAAGAC-CA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74332557 42 + 120421639 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=4107.000000 s hg38.chr3_KI270934v1_alt 121210 6 + 163458 CACCAG s rheMac8.chr6 179843475 6 - 180051392 TACCAG i rheMac8.chr6 I 1 I 4 s macNem1.NW_012013899v1 67547 6 + 100774 TACCAG i macNem1.NW_012013899v1 I 1 I 4 s otoGar3.GL873745 2122220 6 - 2165740 TACCAG i otoGar3.GL873745 I 1 C 0 s dasNov3.JH577625 363393 6 - 913073 CACCAC i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74332557 42 + 120421639 I e aotNan1.NW_018494784v1 135417 0 - 211231 C e saiBol1.JH378155 16304637 0 + 16417988 C e calJac3.chr2 204162509 0 + 204313951 C e cebCap1.NW_016108150v1 91751 0 - 306014 C e canFam3.chr34 11950219 1 + 42124431 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e manLeu1.NW_012101728v1 64023 11 + 74206 I e chlSab2.chr4 1405591 1 + 91010382 I e cerAty1.NW_012004452v1 27242 11 - 218577 I e macFas5.chr6 1312515 1 + 181584905 I e nomLeu3.chr11 2900956 4012 - 123690457 I e gorGor5.CYUI01015759v1 13817 0 + 880730 C e panPan2.chrUn_NW_014024201v1 178819 0 - 190779 C e panTro5.chr3 2591584 0 - 202621043 C a score=35350.000000 s hg38.chr3_KI270934v1_alt 121216 19 + 163458 -----ATACC-AGCAGATATTTAGC------ s panTro5.chr3 2591584 19 - 202621043 -----ATACC-AGCAGATATTTAGC------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178819 19 - 190779 -----ATACC-AGCAGATATTTAGC------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13817 19 + 880730 -----ATACC-AGCAGATATTTAGC------ i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 1312516 14 + 181584905 ------TACC-AGCAGATATT---------- i macFas5.chr6 I 1 C 0 s chlSab2.chr4 1405592 14 + 91010382 ------TACC-AGCAGATATT---------- i chlSab2.chr4 I 1 C 0 s calJac3.chr2 204162509 19 + 204313951 -----ATACC-AGCAGATACTCAGC------ i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16304637 19 + 16417988 -----ATACC-AGCAGACACTCAGC------ i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91751 19 - 306014 -----ATACC-AGCAGACACTCAGC------ i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 135417 19 - 211231 -----ACACC-AGCAGATACTCAGC------ i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2122226 12 - 2165740 -------------AAGATATTTAAC------ i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11950220 18 + 42124431 ------TAAC-ACCAAATATCTGAC------ i canFam3.chr34 I 1 C 0 s dasNov3.JH577625 363399 31 - 913073 ATTTTATGCTGAAGAACTATTCAAAGTTAAT i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74332557 42 + 120421639 I e macNem1.NW_012013899v1 67553 4 + 100774 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e manLeu1.NW_012101728v1 64023 11 + 74206 I e cerAty1.NW_012004452v1 27242 11 - 218577 I e rheMac8.chr6 179843481 4 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=30899.000000 s hg38.chr3_KI270934v1_alt 121235 6 + 163458 AAGTGT s panTro5.chr3 2591603 6 - 202621043 AAGTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178838 6 - 190779 AAGTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13836 6 + 880730 AAGTGT i gorGor5.CYUI01015759v1 C 0 C 0 s calJac3.chr2 204162528 6 + 204313951 AAGTGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16304656 6 + 16417988 AAGTGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91770 6 - 306014 AAGTGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 135436 6 - 211231 AAGTGT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2122238 6 - 2165740 AAGTGT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74332599 6 + 120421639 AAGTGT i mm10.chr13 I 42 I 3 s canFam3.chr34 11950238 6 + 42124431 AAGCAT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 363430 6 - 913073 AAGTAA i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 67553 4 + 100774 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e manLeu1.NW_012101728v1 64023 11 + 74206 I e chlSab2.chr4 1405606 0 + 91010382 C e cerAty1.NW_012004452v1 27242 11 - 218577 I e macFas5.chr6 1312530 0 + 181584905 C e rheMac8.chr6 179843481 4 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=770030.000000 s hg38.chr3_KI270934v1_alt 121241 115 + 163458 TATCACATTAA------AGAACAGGGTCAGGCAATGAAAGAGCTGCAAACTGTTCT---TCTGAAAGGCAAATGACCCACACACTTTG-AAAGCTGCCGA--AAAACATCTGTGGGTATCAGACACC------------------------------------------ s panTro5.chr3 2591609 115 - 202621043 CGTTACATTAA------AGAATAGGGTCAGGCAATGAAAGAGCTGCAAATTGTTTT---TCTGAAAGGCAAATAACCCACACACTTTG-AAAGCTGTCGA--AAAACATCTGTGGGTATCAGACACA------------------------------------------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178844 115 - 190779 CATTACATTAA------AGAACAGGGTCAGGCAATGAAAGAGCTGCAAACTGTTTT---TCTGAAAGGCAAATAACCCACACACTTTG-AAAGCTGTCGA--AAAACATCTGTGGGTATCAGACAAA------------------------------------------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13842 115 + 880730 CATTACATTAA------AGAACAGGGTCAGGCAATGAAAGAGCTGCAAATTGTTTT---TCTGAAAGGCAAATAACCCACACACTTTG-AAAGCTGTCGA--AAAACATCTGTGGGTATCAGACACA------------------------------------------ i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179843485 114 - 180051392 TATTACATTAA------AGAACAGGGTCAGA-AATGAAAGAGCTGCAACTTGTTTA---ACTGAAAGCCAGATAATCCACACCCTTTG-AAAGCTACCGA--AAAACACCTGTGGGCATCAGACACA------------------------------------------ i rheMac8.chr6 I 4 C 0 s macFas5.chr6 1312530 110 + 181584905 ----ACATTAA------AGAACAGGGTCAGA-AATGAAAGAGCTGCAACTTGTTTA---ACTGAAAGCCAGATAACCCACACCCTTTG-AAAGCTACCGA--AAAACACCTGTGGGCATCAGACACA------------------------------------------ i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 67557 114 + 100774 TATTACATTAA------AGAACAGGGTCAGA-AATGAAAGAGCTGCAACTTGTTTA---ACTGAAAGCCAGATAACCCACACCCTTTG-AAAGCTACCGA--AAAACACCTGTGGGCATCAGACACA------------------------------------------ i macNem1.NW_012013899v1 I 4 C 0 s cerAty1.NW_012004452v1 27253 115 - 218577 TATTACATTAA------AGAACAGGGTCAGG-AATGAAAGAGCTGCAAACTGTTTT---ACTAAAAGCCAAGTAACCCACACCCTTTGAAAAGCTGCCGA--AAAACACCTGTGGGCATCAGACACG------------------------------------------ i cerAty1.NW_012004452v1 I 11 C 0 s chlSab2.chr4 1405606 111 + 91010382 ----ACATTAA------AGAACAGGGTCAGG-AATGAAAGAGCTGCAAACTGTTTT---ACTGAAAGCCAAGTAACCCACACCCTTTGAAAAGCTGCCGA--AAAACACCTGTGGGCATCAGACACG------------------------------------------ i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 64034 115 + 74206 TATTACATTAA------AGAACAGGGTCAGG-AATGAAAGAGCTGCAAACTGTTTT---ACTGAAAGCCAAGTAACCCACACCCTTTGAAAAGCTGCCGA--AAAACACCTGTGGGCATCAGACACG------------------------------------------ i manLeu1.NW_012101728v1 I 11 C 0 s calJac3.chr2 204162534 109 + 204313951 -----CATTAA------GGAACAGGGTCAGGCAATGAC----CTGCAGATTGTTTCTAAACTGAAAGCCAAATAACCCACACACTTTG-AAGAATGCTGA--CAAACATCTGTGGGTATCAGACGCA------------------------------------------ i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16304662 114 + 16417988 CATTACATTAA------GGAACAGGGTCAGGCAATGAAAGAGCTGCAAATTGTTTT---ACTGAAAGCCAAATAACCCACACCCTTTG-AAGGCTGCTGA--C-AACATCTGTGGGTATCAGACACA------------------------------------------ i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91776 114 - 306014 CATTACATTAA------GGAACAGGGTCAGGCAATGAAAGAGCTGCAGATTGTTTT---ACTGAAAGCCAAATAACCCACACCCTTTG-AAGGCTGCTGA--C-AACATCTGTGGGTATCAGACACA------------------------------------------ i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 135442 115 - 211231 CATTACATTAA------GGAACAGGGTCAGGCAATCAAAGAGCTGCAGATTGTTTT---ACTGAAAGCCAAACAACCCACACACTTTG-AAGGCTGCTGA--CAAACACCTGTGGGTATGAGACACA------------------------------------------ i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2122244 100 - 2165740 CACTACATTAA------AGAACAAGGTCTTGCAACAGAAAAGCCTTAAGTTGCTTT---GCT-AAAGACAACTAGCCCACACACCTTA-----------------ATACCTGTGGGTGCTAAACACA------------------------------------------ i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74332608 120 + 120421639 ACCCACAATAAGTCCCTAGATTAAAGCCAGGCACTTG--GAACCTAAGGCAATTTC---ACTAAAAGACAAGTGACACACAAGCCCTG-AAGAACACCTGCCAAAACACCTGT-AATATTGATTAAA------------------------------------------ i mm10.chr13 I 3 C 0 s canFam3.chr34 11950244 79 + 42124431 CACCACAGTGA------G--ACAGTG-CTGGCACTGAA-GAGCCTAA---CGCTTC---AGCAAA----CAAGAGCCCACACA------CAGGGTCCCAA-----------------ATCAG----------------------------------------------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 363436 148 - 913073 CATCAT-TTGA------GGAACAGTATTAGGTACTGGAGAGGCCTAAAGCT-TTTT---ACTGAAGTTCAAATAACCTACAAACCTCA-AACC---------AAAGCATTCATGGGTATAAAAAATGCAGGAtgggctcttgtcctgccctctgtgcactgctctcacc i dasNov3.JH577625 C 0 I 200 e colAng1.NW_012116910v1 796515 6480 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1456697.000000 s hg38.chr3_KI270934v1_alt 121356 211 + 163458 ACACCC---AAGGCTCACACGCCGACTTCAGGTTGG-----GTGCGTGTCTCTCTCT------------CCCATAC-TCCGTCACATACTCACACACA--------CTAAGAG-AAACTCTGTTCCACAGATTTGAGA-----AAG------------A----------AACTGGCTAAAATTTTCAAAATGTAGGTCTTTAGGAAAATATCGCAGACTAACAGACGCCTGCCGGCAGCT---GA------------------GAGAG--------------GTG-------------------------------GCT---GTGCACATGTGCC---------------------------------TG s panTro5.chr3 2591724 211 - 202621043 ACACCT---AAGGCTCACACACCGACTTCAGGTTGG-----GTGTGTGTCTCTCTCT------------CCCATAC-TCCATCACATACTCACACACA--------CTAAGAG-AAACTCTGTTCCACAGATTTGAGA-----AAG------------A----------AACTGGCTAAAATTTTCAAAATGTAGGTCTTTAGGAAAATATCACAGACTAACAGACGCCTGCCGGCAGCT---GA------------------GAGAG--------------GTG-------------------------------GCT---GTGCACATGTGCC---------------------------------TG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 178959 211 - 190779 ACACGT---AAGGCTCACACACCGACTTCAGGTTGG-----GTGTGTGTCTCTCTCT------------CCCATAC-TCCATCACATACTCACACACA--------CTAAGAG-AAACTCTGTTCCACAGATTTGAGA-----AAG------------A----------AACTGGCTAAAATTTTCAAAATGTAGGTCTTTAGGAAAATATCACAGACTAACAGACGCCTGCCGGCAGCT---GA------------------GAGAG--------------GTG-------------------------------GCT---GTGCACATGTGCC---------------------------------TG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 13957 208 + 880730 ACACCC---AAGGCTCACACACCGACTTCAGATTGG-----GTGCGTGTCTCTCTCT------------CCCATAC-TCCGTCACA---TTACACACA--------CTAAGAG-AAACTCTGTTCCACAGATTTGAGA-----AAG------------A----------AACTGGCTAAAATTTTCAAAATGTAGGTCTATAGGAAAATATCACAGACTAACAGACGCCTGCCGGCAGCT---GA------------------GAGAG--------------GTG-------------------------------GCT---GTGCACATGTGCC---------------------------------TG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179843599 211 - 180051392 ACACCC---GAGGCTCACGTGCCAACTTCAGGTTGC-----GTGTGCGTCTCTCATT------------CCTGTAC-TCTGTCACATACTCACCCACA--------CTAAGAG-AAATTCTGTTCCACAGATCTGAGA-----AAG------------A----------AACTGGCTAAAATTTTTAAAATGTAGGTCTTTAAGAAAATACCACAGACTAACAGACGCCTGTCAGCAGCT---GA------------------AAGAG--------------GTG-------------------------------GCT---GTGCACGTGTGCC---------------------------------TG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1312640 211 + 181584905 ACACCC---AAGGCTCACGTGCCGACTTCAGGTTGC-----GTGTGCGTCTCTCATT------------CCCGTAC-TCTGTCACATACTCACCCACA--------CTAAGAG-AAATTCTGTTCCACAGATCTGAGA-----AAG------------A----------AACTGGCTAAAATTTTTAAAATGTAGGTCTTTAAGAAAATACCACAGACTAACAGACGCCTGTCAGCAGCT---GA------------------GAGAG--------------GTG-------------------------------GCT---GTGCACGTGTGCC---------------------------------TG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 67671 225 + 100774 ACACCC---AAGGCTCACGTGCCGACTTCAGGTTGC-----GTGTGCGTCTCTCATT------------CCCGTAC-TCTGTCACATACTCACCCACA--------CTAAGAG-AAATTCTGTTCCACAGATCTGAGA-----AAG------------A----------AACTGGCTAAAATTTTTAAAATGTAGGTCTTTAAGAAAATACCACAGACTAACAGACGCCTGTCAGCAGCT---GA------------------GAGAGGTGGCTGTGCACGTGTG-------------------------------GCT---GTGCACGTGTGCC---------------------------------TG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 27368 211 - 218577 ACACTC---AAGGCTCACGTGCCGACTTCAGGTTGC-----GTGTGCGTCTCTCTCT------------CCCGCAC-TCTGTCACATACTCACCCACA--------CTAAGAG-AAACTCTGTTCCACAGATCTGAGA-----AAG------------A----------AACTGGCTAAAATTTTTAAAATGTAGGTCTTTAAGAAAATACCACAGACTAACAGACGCCTGTCAGCAGCT---GA------------------GAGAG--------------GTG-------------------------------GCT---GTGCACGTGTGCC---------------------------------TG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1405717 211 + 91010382 ACACCC---AAGGCTCACGTGCTGACTTCAGGTTGC-----GTGTGCGTCTCTCTCT------------CCCGTAC-TCTGTCACATACTCACACACA--------CTAAGAG-AAACTCCGTTCCACAGATCTGAGA-----AAG------------A----------AACTGGCTAAAATTTTCAAAATGTAGGTCTTTAAGAAAATACCACAGACTAACAGACGCCTGTCAGCAGCT---GA------------------GAGAG--------------GTG-------------------------------GCT---GTGCACGTGTGCC---------------------------------TG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 64149 211 + 74206 ACACCC---AAGGCTCACGTGCCGACTTCAGGTTGC-----GTGTGCGTCTCTCTCT------------CCCGCAC-TCTGTCACATACTCACACACA--------CTAAGAG-AAACTCTGTTCCACAGATCTGAGA-----AAG------------A----------AACTGGCTAAAATTTTCAAAATGTAGGTCTTTAAGAAAATACCACAGACTAACAGACGCCTGTCAGCAGCT---GA------------------GAGAG--------------GTG-------------------------------GCT---GTGCACGTGTGCC---------------------------------TG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204162643 210 + 204313951 ACAGCC---AA-GCTCACATGCCGACCTCAGGTTGG---GAGCGTGTGTCTCTCTCT------------CCCATAA-TCTATCACATACTCACACACA--------CTCAGAG-AAATTATGTTCCACAGATTTGAGA-----AAA------------A----------AACTGGCTAAAGTTTTCAAAATGTAGGTCTTTAGGTAAATATCACAGACTAACAGATGCCAGCCAGTAGCT-----------------------GAGAG--------------GTG-------------------------------GCT---ATGCACGTGTGCC---------------------------------TG i calJac3.chr2 C 0 I 154 s saiBol1.JH378155 16304776 147 + 16417988 ACGCCC---GA-GCTCACATGCCAACCTCAG------------------------------------------------------------------------------------------GTTCCACAGATTTGAGA-----AAG------------A----------AACTGGCTAAAATTTTCAAAATGTAGGTCTTTAGGAAAATATCACAGACTAACAGATGCCAGCCAGCAGCT---GA------------------GAGAG--------------GTG-------------------------------GCT---GTGCACGTGTGCC---------------------------------TG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 91890 207 - 306014 ACA-CC---AA-GCTCACGTGCCGACCTCAGGTTGG-------GTGTGTGTCTCTGT------------CCCACCA-TCTATCACATACTCACACACA--------CTCAGAG-GAATTATGTTCCAAAGATTTGAGA-----AAG------------A----------AACTGGCTAAAATTTTCAAAATGTAGGTCTTTAGGAAAATATCACAGACTAACAGATGCCAGCCAGCAGCT---GA------------------GAGAG--------------GTG-------------------------------GCT---GTGCACATGTGCC---------------------------------TG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 135557 214 - 211231 ACACCC---AA-GCTCACATGCCGCCCTCAGGATGG-GTGTGTGTGTGTGTCTCTCT------------CCCACAA-TCTATCACATACTCATACACA--------TTCAGAG-AAATTATGTTCCACAGATTTGAGA-----AAG------------A----------ATCTGGCTAAAATTTTCAAAATGTAGGTCTTTAGGAAAATATCACAGACTAGCAGATGCCAGCCAGCGGCT---GA------------------GAGAG--------------GTG-------------------------------GCT---GTGCACGTGTGCC---------------------------------TG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2122344 306 - 2165740 CCACCACTGAATGCTCATATGCTGCCTTCATTTGGG-GAAGGGGTGTGTTTCTCCCT------------CTCACAC-TGAGTG------TCCACCACA--------CACAGAC-ATATTACATTCC--AGATTTGAGA-----AAGATTGACATTAAAA----------TACCAGCTTAAATTCTCAAAATGTGGGTCTTGAGAAAAGTATCACAAA-TAACAGAAGATAGTCAATAAGT---AACAAAGCTAACTCTGGGGTGAGAG--------------GTGTTGATAGTCACACAGAAATAATAGCCTAGACGCTAAAATGTAAATATGCCACAGTAGAGAAAATCTTAATTAACCTCTATAGGTG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74332728 173 + 120421639 ACAAAT---TAACTCCTAAGGCTGAGTATTAGCTGA-----GCCTGAGAATCTCA------------------------------------GCTCATA--------CCAAGAATAAATGATGATACACTTATGTG--------AAG----------------------------------ACTCTCAAAATATATGCCTTTAAGGATATATCATAAATTAACAGGTGTTAGTCAAAAAAT----A------------------ATGAC--------------GTA-------------------------------GCT---TTATTCTCTAACC---------------------------------CT i mm10.chr13 C 0 C 0 s canFam3.chr34 11950323 206 + 42124431 -CATCA---AAGGCCCACATCCTAACGTCAGGTTGT-----AAGCATATCCGTCTCT------------CTCACA----------ACACTCATGTGCAAATGATGCTCCACAA-TAAATCTGATCTCCAGATTTGAGATTCACATC------------A----------AACCACCCAAACTTCCCAAAATATAGGTTTTTAGAGCAATATCAAAAATGAAAAGATA---GTCCCAGGGC---AG------------------CAAAG--------------GTA-------------------------------ACT---ACACACAGGC-------------------------------------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 363784 226 - 913073 ACATCT---GGGGCTCGTACGCAAACTTCAGGTTAGGGTGTGTGTGTGACTTTCCCTGTCCATGTTGCCCCCAAATGTCTGTCTCTCTCTCACATATA--------C----AC---------TTCCACAAGCTTGAGA-----AAA------------AATTTCCATCTAACTGGTTAAAATTCTCTAAACAGAGGCCTTTAGAAAAGCATCACAAACCAGTAGACACAGGTCTGAGGGTCCCTG------------------CAGAG--------------GCA-------------------------------GCC---GTG----TGTACC---------------------------------TG i dasNov3.JH577625 I 200 C 0 e colAng1.NW_012116910v1 796515 6480 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=101821.000000 s hg38.chr3_KI270934v1_alt 121567 10 + 163458 CACACGAAGG s panTro5.chr3 2591935 10 - 202621043 CACACGAAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 179170 10 - 190779 CACACGAAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 14165 10 + 880730 CACACGAAGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179843810 10 - 180051392 CACACGAAGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1312851 10 + 181584905 CACACGAAGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 67896 10 + 100774 CACACGAAGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 27579 10 - 218577 CACACGAAGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1405928 10 + 91010382 CACACGAAGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 64360 10 + 74206 CACACGAAGG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204163007 10 + 204313951 CACACGAAGG i calJac3.chr2 I 154 C 0 s saiBol1.JH378155 16304923 10 + 16417988 CACACAAAGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 92097 10 - 306014 CACACGAAGG i cebCap1.NW_016108150v1 C 0 I 731 s aotNan1.NW_018494784v1 135771 10 - 211231 CACACGGAGG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2122650 10 - 2165740 GGGAGGAAGG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74332901 10 + 120421639 AACCCTGAGG i mm10.chr13 C 0 I 12 s canFam3.chr34 11950529 10 + 42124431 TACACAGAGC i canFam3.chr34 C 0 I 6 s dasNov3.JH577625 364010 10 - 913073 TACACACAGG i dasNov3.JH577625 C 0 C 0 e colAng1.NW_012116910v1 796515 6480 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=78087.000000 s hg38.chr3_KI270934v1_alt 121577 13 + 163458 TGAGGGC--GAGCGG- s panTro5.chr3 2591945 13 - 202621043 TGAGGGC--GAGTGG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 179180 13 - 190779 TGAGGGC--GAGTGG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 14175 13 + 880730 TGAGGGC--GAGCGG- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179843820 13 - 180051392 TGAGGGC--GAGCGG- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1312861 13 + 181584905 TGAGGGC--GAGCGG- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 67906 13 + 100774 TGAGGGC--GAGCGG- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 27589 13 - 218577 TGAGGGC--GAGCGG- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1405938 13 + 91010382 TGAGGGT--GAGCAG- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 64370 13 + 74206 TGAGGGC--GAGCGG- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204163017 13 + 204313951 TGAGGGC--GGGCAG- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16304933 13 + 16417988 CGAGGGC--GGGCAG- i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 135781 13 - 211231 CGAGGGC--GGGCCC- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2122660 13 - 2165740 AAGGGTT--TAGTAG- i otoGar3.GL873745 C 0 I 159 s mm10.chr13 74332923 13 + 120421639 TGTGCAA--AAGTAG- i mm10.chr13 I 12 I 5 s canFam3.chr34 11950545 13 + 42124431 GGATGAT--GCGTGG- i canFam3.chr34 I 6 I 1 s dasNov3.JH577625 364020 16 - 913073 TAGGGGCTGGGGTGGG i dasNov3.JH577625 C 0 C 0 e cebCap1.NW_016108150v1 92107 731 - 306014 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=153445.000000 s hg38.chr3_KI270934v1_alt 121590 30 + 163458 TGCTGAAACTCAC---AGA--AGCAACCCCGG-----------------CCC--------------------------------------------------------------- s panTro5.chr3 2591958 30 - 202621043 AGCTGAAACTCAC---AGA--AGCAACCCCGG-----------------CCC--------------------------------------------------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 179193 30 - 190779 AGCTGAAACTCAC---AGA--AGCAACCCCGG-----------------CCC--------------------------------------------------------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 14188 30 + 880730 TGCTGAAACTCAC---AGA--AGCAACCCCGG-----------------CCC--------------------------------------------------------------- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179843833 30 - 180051392 TGCTGGAACTCAC---AGA--AGCAACCCCGG-----------------CCC--------------------------------------------------------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1312874 30 + 181584905 TGCTGGAACTCAC---AGA--AGCAACCCCGG-----------------CCC--------------------------------------------------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 67919 30 + 100774 TGCTGGAACTCAC---AGA--AGCAACCCCGG-----------------CCC--------------------------------------------------------------- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 27602 30 - 218577 TGCTGGAACTCAC---AGA--AGCAACCCCGG-----------------CCC--------------------------------------------------------------- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1405951 30 + 91010382 TGCTGGAACTCAC---AGA--TGCAACCCCGG-----------------CCC--------------------------------------------------------------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 64383 30 + 74206 TGCTGGAACTCAC---AGA--AGCAACCCCGG-----------------CCC--------------------------------------------------------------- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204163030 28 + 204313951 TGCTGAAACT--C---AGA--AGCAACGCCCT-----------------CCC--------------------------------------------------------------- i calJac3.chr2 C 0 I 66 s saiBol1.JH378155 16304946 28 + 16417988 TGCTGAAACT--C---AGA--AGCAACCCCGG-----------------CCC--------------------------------------------------------------- i saiBol1.JH378155 C 0 I 65 s aotNan1.NW_018494784v1 135794 28 - 211231 TGCTGAAACG--C---GGA--AGCAACCGCGG-----------------CCC--------------------------------------------------------------- i aotNan1.NW_018494784v1 C 0 I 96 s otoGar3.GL873745 2122832 50 - 2165740 TGTTAACAGTCACCGAAGA--GGTAACAACTGAAAAGGAGGTACTTGTATCC--------------------------------------------------------------- i otoGar3.GL873745 I 159 C 0 s mm10.chr13 74332941 32 + 120421639 ACCTAATGCCTACCA-AAG--AGAAAAGTGGA-----------------CAC--------------------------------------------------------------- i mm10.chr13 I 5 C 0 s canFam3.chr34 11950559 30 + 42124431 TGCTGAAACACAC---AAA--AGCCACATCAG-----------------CCC--------------------------------------------------------------- i canFam3.chr34 I 1 C 0 s dasNov3.JH577625 364036 95 - 913073 AGCTGAGAACCAC---AAAGCAGCAACACCTG-----------------CTGGGATGTCAGAATGTAGAAGGGAACAATAGCTATCAAACAGCTGAGAAAAGGAAGGGAGGCTAT i dasNov3.JH577625 C 0 C 0 e cebCap1.NW_016108150v1 92107 731 - 306014 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=165448.000000 s hg38.chr3_KI270934v1_alt 121620 32 + 163458 GTGTGCCC---------GCTCAGACAGTGCTGGTGGTAAAC s panTro5.chr3 2591988 32 - 202621043 GTGTGCCC---------GCTCAGACAATGCTGGTGGTAAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 179223 32 - 190779 GTGTGCCC---------GCTCAGACAATGCTGGTGGTAAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 14218 32 + 880730 GTGTGCCC---------GCTCAGACAATGCTGGTGGTAAAC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179843863 32 - 180051392 GTGTGCCC---------ACTCAGACAATGCTGGTGGTAAAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1312904 32 + 181584905 GTGTGCCC---------ACTCAGACAATGCTGGTGGTAAAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 67949 32 + 100774 GTGTGCCC---------ACTCAGACAATGCTGGTGGTAAAT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 27632 32 - 218577 GTGTGCCC---------ACTCAGACAATGCTGGTGGTAAAT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1405981 32 + 91010382 GTGTGCCC---------ACTCAGACAACGCTGGTGGTAAAT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 64413 14 + 74206 GTGTGCCC---------ACTCAG------------------ i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204163124 31 + 204313951 GTGTGCCT---------GCTCAGACGACTCTGGTGATAAA- i calJac3.chr2 I 66 C 0 s saiBol1.JH378155 16305039 31 + 16417988 GTGTGCCT---------GCTCAGACAACGCTGGTGATAAA- i saiBol1.JH378155 I 65 C 0 s cebCap1.NW_016108150v1 92838 30 - 306014 GTGTGCCC----------CTCAGACAACGCTGGTGATAAA- i cebCap1.NW_016108150v1 I 731 C 0 s otoGar3.GL873745 2122882 34 - 2165740 ATGTGCCC-------CAATTCAGACATCTCTGGATATTAAT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74332973 41 + 120421639 GTTTTTCCACCCCCTACACTCCTGCATCCCTGAAGGAGAAT i mm10.chr13 C 0 C 0 s canFam3.chr34 11950589 32 + 42124431 ATGTTAAA---------ATACAGACACCAACAACAGCCACC i canFam3.chr34 C 0 I 36 s dasNov3.JH577625 364131 32 - 913073 GTGTATGT---------GCCCAGACATCTGCAGAGAAAATC i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 135822 96 - 211231 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=5346840.000000 s hg38.chr3_KI270934v1_alt 121652 568 + 163458 CACACGCACCTTCCTTCGCGGATCTCCAGAGTCATCCACCGAGACACCACATCTCTAGACGCCAGGTCCTTCGCGATGGGGGCGTATCGCTCCATAAACCTTTCGCCTTGACTGTTAATGAGAATGCCTCCCTCTCCACGACATCCTTCCG-TAATGAGACAACCAGCACCATATGTGCCTGCAAAAAA--CC-------AC--------ACATTTATAACCTAACAATTGCTAGGTCTCTATTTCAAATGCATTACTTTTTTTTACAAGATATTTTTTGGGGGAGAGACAAAAAAGATATGCAGAAGGCATTATATGC----AAAACTGAAC-AGAAAG--------AACAGTTAAGATACAGTAGAAAGTCTGGATAACAAAAAGCACTGACAAGGCTGACAGCTGCAGCAGAGGCTGGGGCAGAGTGGCGTCCCCAGAGAGGAGAAAGGCCG---------------GCCC----------ACAGACCTCTGGCC--AATACTCTGATTACAGCCCGGTGTA-----------------------CGTTGGATGCCT-CAAA------TTTTGTTTTAATTTTTGAACATTCTTTTGCACTATGATACTGTGGTGAC------TAGTTAAGAAT--ACTAGCTTGGAGAATTCATATCTAA s panTro5.chr3 2592020 568 - 202621043 CACACGCACCTTCCTTCGCGGATCTCCAGAGTCATCCACCGAGACACCACATCTCTAGACGCCAGGTCCTTCGCGATGGGGGCGTATCGCTCCATAAACCTTTCACCTTGACTGTTAATGAGAATGCCTCCCTCTCCACAACATCCTTCCG-TAATGAGACAACCAGCACCATATGTGCCTGCAAAAAA--CC-------AC--------ACATTTATAACCTAACAATTGCTAGGTCTCTATTTCAAATGCATTATTTTTTTTTACAAGATATTTTTTGGGGGAGAGACTAAAAAGATATGCAGAAGGCATTATATGC----AAAACTGAAC-AGAAAG--------AACAGTTATGATACAGTAGAAAGTCTGGATAACAAAAAGCACTGACAAGGCTGACAGCTGCAGCAGAGGCTGGGGCAGAGTGGCGTCCCCAGAGAGGAGAAAGGCCG---------------GCCC----------ACAGACCTCTGGCC--AATACTCTGATTACAGCCTGGTGTA-----------------------CGCTGGATGCCT-CAAA------TTTTGTTTTAATTTTTGAACATTCTTTTGCACTATGATACTGTGGTGAC------TAGTTAAGAAT--ACGAGCTTGGAGAATTCATATCTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 179255 568 - 190779 CACACGCACCTTCCTTCGCGGATCTCCAGAGTCATCCACCGAGACACCACATCTCTAGACGCCAGGTCCTTCGCGATGGGGGCGTATCGCTCCATAAACCTTTCGCCTTGACTGTTAATGAGAATGCCTCCCTCTCCACGACATCCTTCCGTTAATGAGACAACCAGCACCATACGTGCCTGCAAAAAA--CC-------AC--------ACATTTATAACCTAACAATTGCTAGGTCTCTATTTCAAATGCATTA-TTTTTTTCACAAGATATTTTTTGGGGGAGAGACTAAAAAGATATGCAGAAGGCATTATATGC----AAAACTGAAC-AGAAAG--------AACAGTTAAGATACAGTAGAAAGTCTGGATAACAAAAAGCACTGACAAGGCTGACAGCTGCAGCAGAGGCTGGGGCAGAGCGGCGTCCCCAGAGAGGAGAAAGGCCG---------------GCCC----------ACAGACCTCTGGCC--AATACTCTGATTACAGCCTGGTGTA-----------------------CGTTGGATGCCT-CAAA------TTTTGTTTTAATTTTTGAACATTCTTTTGCACTATGATACTGTGGTGAC------TAGTTAAGAAT--ACGAGCTTGGAGAATTCATATCTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 14250 567 + 880730 CACACGCACCTTCCTTCGCGGATCTCCAGAGTCATCCACCGAGACACCACATCTCTAGACGCCAGGTCCTTCGCGACAGGGGGGTATCGCTCCATAAACCTTTCGCCTTGACTGTTAATGAGAATGCCTCCCTCTCCATGACATCCTTCCG-TAATGAGACAACCAGCACCATATGTGCCTGCAAAAAA--CC-------AC--------ACATTTATAACCTAACAATTGCTAGGTCTCTATTTCAAATGCATTA-TTTTTTTTACAAGATATTTTTTGGGGGAGAGACAAAAAAGATATGCAGAAGGCATTATATGC----AAAACTGAAC-AGAAAG--------AACAGTTAAGACACAGTAGAAAGTCTGGATAACAAAAAGCACTGACAAGGCTGACAGCTGCAGCAGAGGCTGGGGCAGAGTGGCGTCCCCAGAGAGGAGAAAGGCCG---------------GCCC----------ACAGATCTCTGGCC--AATACTCTGATTACAGCCTGGTGTA-----------------------TGTTGGATGCCT-CAAA------TTTTGTTTTAATTTTTGAACATTCTTTTGCACTATGATACTGTGGTGAC------TAGTTAAGAAT--ACTAGCTTGGAGAATTCATATCTAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179843895 567 - 180051392 CACACGGACCTTCCTTCGCGGATCTCCAGAGTCATCGACCGAGACACCACATCTCTAGACGCCAGGTCCTTCGCCACGGGGGCATATCGCTCCATAAACCTTTCGCCTTGACTGTTAATGAGAATGCCTCCCTCTCCACGACATCCTTCCG-TAATGAGACAACCGGCACCATATATGCCTGCAAAAAA--CC-------AC------AAACATTTATAACCTAACAATTGCTAGGTCTCTATTTCAAATGCATTA--TTTTTTTTCAAGAT-TTTTTTGGGGGAGAGAGGAAAAAGATATGCAGAAGGCATTATATGC----AAAACTGAAT-AGAAAG--------AACAGTTAAGATACAGTAGAAAGTCTGGATAACAAAAAGCACTGACGAGGCTGATGGCTGCAGCAGAGGTTGGGGCAGAGCAGTGTCCCCAGCGAGGAGAAAGGCCA---------------GCCC----------ACAGACCTCTGGCC--GATACTCTGATTACAGCCCAGTGTA-----------------------CGCTGGATGCCT-CAAA------TTTTGTTTTAATTTTTGAACATTCTTTTGCACTATGATACTGTGGTAAC------TAGTTAAGAAT--ACGAGCTTGGAGAATTCATATCTAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1312936 567 + 181584905 CACACGGACCTTCCTTCGCGGATCTCCAGAGTCATCGACCGAGACACCACATCTCTAGACGCCAGGTCCTTCGCCACGGGGGCGTATCGCTCCATAAACCTTTCGCCTTGACTGTTAATGAGAATGCCTCCCTCTCCACGACATCCTTCCG-TAATGAGACAACCGGCACCATATATGCCTGCAAAAAA--CC-------AC------AAACATTTATAACCTAACAATTGCTAGGTCTCTATTTCAAATGCATTA--TTTTTTTTCAAGAT-TTTTTTGGGGGAGAGAGGAAAAAGATATGCAGAAGGCATTATATGC----AAAACTGAAT-AGAAAG--------AACAGTTAAGATACAGTAGAAAGTCTGGATAACAAAAAGCACTGACGAGGCTGACAGCTGCAGCAGAGGTTGGGGCAGAGCAGTGTCCCCAGCGAGGAGAAAGGCCA---------------GCCC----------ACAGACCTCTGGCC--GATACTCTGATTACAGCCCAGTGTA-----------------------CGCTGCATGCCT-CAAA------TTTTGTTTTAATTTTTGAACATTCTTTTGCACTATGATACTGTGGTAAC------TAGTTAAGAAT--ACGAGCTTGGAGAATTCATATCTAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 67981 567 + 100774 CACACGGACCTTCCTTCGCGGATCTCCAGAGTCATCGACCGAGACACCACATCTCTAGACGCTAGGTCCTTCGCCACGGGGGCGTATCGCTCCATAAACCTTTCGCCTTGACTGTTAATGAGAATGCCTCCCTCTCCACGACATCCTTCCG-TAATGAGACAACCGGCACCATATATGCCTGCAAAAAA--CC-------AC------AAACATTTATAACCTAACAATTGCTAGGTCTCTATTTCAAATGCATTA--TTTTTTTTCAAGAT-TTTTTGGGGGGAGAGAGGAAAAAGATATGCAGAAGGCATTATATGC----AAAACTGAAT-AGAAAG--------AACAGTTAAGATACAGTAGAAAGTCTGGATAACAAAAAGCACTGACGAGGCTGACAGCTGCAGCAGAGGTTGGGGCAGAGCAGTGTCCCCAGCGAGGAGAAAGGCCA---------------GCCC----------ACAGACCTCTGGCC--GATACTCTGATTACAGCCCAGTGTA-----------------------CGCTGGATGCCT-CAAA------TTTTGTTTTAATTTTTGAACATTCTTTTGCACTATGATACTGTGGTAAC------TAGTTAAGAAT--ACGAGCTTGGAGAATTCATATCTAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 27664 562 - 218577 CACACGGACCTTCCTTCGCGGATCTCCAGAGTCATCGACCGAGACACCACATCTCTAGACGCCAGGTCCTTCGCCACGGGGGCGTATCGCTCCATGAACCTTTCGCCTTGACTGTTAATGAGAATGCCGCCCTCTCCACGACATCCTTCCG-TGATGAGACAACCGGCACCATATATGCCTGCAAAAAA--CC-------AC------AAACATTTATAACCTAACAATTGCTAGGACTCTATTTCAAATGCATTA----TTTTTTCAAGATATTTTTTGGGGGAGAGAGGAAAAAGATATGCAGAAGGCATTATATGC----AAAACTGAAT-AGAAAG--------AACAGTTAAGATACAGTAGAAAGTCTGGATAACAAAAAGCACTGACGAGGCTGACAGCTGCAGCAGAGGTTGGGGCAGAGCAGTGTCCCCAGCGAGGAGAAAG-------------------GCCC----------ACAGACCTCTGGCC--GATACTCTGATTACAGCCCCGTGTA-----------------------CGCTGGATGCCT-CAAA------TTTTGTTTTAATTTTTGAACACTCTTTTGCACTATGACACTGTGGTAAC------TAGTTAAGAAT--ACGAGCTTGGAGAATTCATATCTAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1406013 567 + 91010382 CACACGGACCTTCCTTCGCGGATCTCCAGAGTCATCGACCGAGACACCACATCTCTAGACGCCAGGTCCTTCGCCACAGGGGCGTATCGCTCCATAAACCTTTCGCCTTGACTGTTAATGAGAATGCCTCCCTCTCCACGACATCTTTCCG-TAATGAGACAACCGGCACCATATATGCCTGCAAAAAA--CC-------AC------AAACATTTATAACCTAACAATTGCTAGGTCTCTATTTCAAATGCATTA---TTTTTTTCAAGATATTTTTTGGGGGAGAGAGGAAAAAGATATGCAGAAGGCATTATATGC----AAAACTGAAT-AGAAAG--------AATAGTTAAGACACAGTAGAAAGTCTGGATAACAAAAAGCACTGATGAGGCTGACAGCTGAAGCAGAGGTTGGGGCAGAGCAGTGTCCCCAGCGAGGAGAAAGGCCA---------------GCCC----------ACAGACCTCTGGCC--GATACTCTGATTACAGCCCAGTGTA-----------------------CGCTGGATGCCT-CAAA------TTTTGTTTTAATTTTTGAACATTCTTTTGCACTATGATACTGTGGTAAC------TAGTTAAGAAT--ACGAGCTTGGAGAATTCATATCTAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 64427 562 + 74206 -ACACGGACCTTCCTTCGCGGATCTCCAGAGTCATCGACCGAGACACCACATCTCTAGACGCCAGGTCCTTCGCCACGGGGGCGTATCGCTCCATAAACCTTTCGCCTTGACTGTTAATGAGAATGCCGCCCTCTCCACGACATCCTTCCG-TGATGAGACAACCGGCACCATATATGCCTGCAAAAAA--CC-------AC------AAACATTTATAACCTAACAATTGCTAGGTCTCTATTTCAAATGCATTA---TTTTTTTCAAGATATTTTTTGGGGGAGAGAAGAAAAAGATATGCAGAAGGCATTATATGC----AAAACTGAAT-AGAAAG--------AACAGTTAAGATACAGTAGAAAGTCTGGATAACAAAAAGCACTGACGAGGCTGACAGCTGCAGCAGAGGTTGGGGCAGAGCAGTGTCCCCAGCGAGGAGAAAG-------------------GCCC----------ACAGACCTCTGGCC--GATACTCTGATTACAGCCCCGTGTA-----------------------CGCTGGATGCCT-CAAA------TTTTGTTTTAATTTTTGAACACTCTTTTGCACTATGACACTGTGGTAAC------TAGTTAAGAAT--ACGAGCTTGGAGAATTCATATCTAA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204163155 562 + 204313951 CATACAGACCTTCCTTCGCGGATCTCCAGAGTCATGGACCGAGACACCACATCTCTGGATGCCAGGTCCTTCGCAACGGGGGCGTATCGCTCCATAAACCTTTCGCCCTGACTGTTAATGAGAATGCCTCCCTCTCCACGACATCCTTCTG-TGATGAGACACCCAGCACCATAGATGCCTGAAAAAAA---C-------AC------AAACATTTATAACTCAACAATTGCTAGGTCTCTATTTCAAACAC---A---TTTTTTTCAAGGTA-TTTTTACGGTAGAGAGG--AAGGATAGGCAGAAGGCATCATATGC----AAAACTGAAT-AGAAAGAA-----GAAAAGTTAAGATACAGTAGGAAGTCTGGATACCAAGGAGCACTGACAGGGCTGACGG-TGCAGC--AGGTCTGGGCAGAGCGGAGTCCCCAGCGAGCAGAACGG--A---------------GCCC----------ACAGAGCTGTGGCC---ATACTTGGATTGCAGCCTGCTGTG------------------------GTTAAATGCCT-CCAA------TTTGGTTTTAATTTTTGAACATTCTTTTGCACTATGATACTGTGGTGAC-TACTTTAGTTAAGAAT-AACCAGCCTGGAGAATTCACATCTAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16305070 566 + 16417988 CACACGGACCTTCCTTCGCGGATCTCCAGAGTCATGGACCGAGACACCACGTCTCTGGACGCCAGGTCCTTTGCGACGGGGGCGTATCGCTCCATAAACCTTTCGCCCTGACTGTTAATGAGAATGCCTCCCTCTCCACGACATCCTTCCG-TGATGAGACAACCAGCACCATATATGCCTGAAAAAAA---C-------AC------AAACATTTATAACCTAACAATTGCTAGGTCTCTATTTCAAATGCACTA---TTTTTTTCAAGGTATTTTTTGCAGTAGAGAGGAAAAAGATATGCAGAAGGCATCATATGC----AAAACTGAAT-AGAAAGAA-----GAAAAGTTGAGATACAGTAGAAAGTCTGGA-GCCAAAAAGCACCGACGAGGCTGGCGG-TGCAGC--AGGTCTGGGCAGAGC---GTCCCCAGTGAGCAGAAAGGACA---------------GCCC----------TCAGAGCTCTGGCT---GTACTCTGAGTACAGCCTGGTGCG------------------------GTTAAATGCCT-CAAA------TGTGATTTTAATTTTTCAGCATTCTTTTGCACTATGATACTGTGGTGAC-TACTTTAGTTAAGAAT-AACCAGGCTGGAGAATTCACATCTAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 92868 569 - 306014 CACACAGACCTTCCTTCGCGGATCTCCAGAGTCATGGACCGAGATACCACGTCTCTGGACGCCAGGTCCTTCGCGACGGGGGCGTATCGCTCCATAAACCTTTCGCCCTGACTGTTAATGAGAATGCCTCCCTCTCCACGACATCCTTCCG-TGATGAGACAACCGGCACCATATATGCCTGAAAAAAA---C-------AC------AAACATTTATAACCTAACAACTGCTAGGTCTCCATTTCAAATGCATTA---TTTTTTTCAAGATATTTTTTGCGGTAGAGAGGAAAAAGATATGCAGAAGGCATCATATGC----AAAACTGAAT-AGAAAGAA-----GAAAAGTTAAGATACAGTAGAAAGTCTGGATACCAAGAAGCACTGACAAGGCTGACGG-TGCAGC--AGGTCTGGGCAGAGCGGAGTCCCCAGCGAGCAGAAAGGACA---------------GCCC----------ACAGAGCTCTGGCC---ACACTCGGATTACAGCCTG-TGTG------------------------GTTAAATGCCT-CAAA------TTTGGTTTTAATTTTTGAGCATTCTTTTGCACTATGACACTGTGGTGGC-TACTTTAGTTAAGAAT-AACCAGCCTGGAGAATTCACATCTAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 135918 568 - 211231 CACACGGACCTTCCTTCGCGGATCTCCAGAGTCATGGACCGAGACACCACGTCTCTGGACGCCAGGTCCTTCGCGACAGGGGCGTACCGCTCCATAAACCTTTCGCCCTGACTGTTAATGAGGATGCCTCCCTCTCCACGACATCCTTCCG-TGATGAGACAACCGGCACCATATATGCCTGCAGAAAA---C-------AT------AAACATTTATAACCTGACAATTGCTAGGTCTCTAATTCAAAGGCATTA---TTTTTTGCAAGATA-TTTTTGTGGTAGAGAGGAAAAAGATACGCAGAAGGCATCATATGC----ACAACTGAAT-AGAAAGGA-----AAAAAGCTAAGATACAGTAGAAAGTCCGGATACCAA-ACGCACTGACAAGGCTGACGG-TGCAGC--GGGTCTGGGCGGGGCGGAGTCCCCGGCGAGCAGAAAGGACG---------------GCCC----------GCGGAGCTCTGGCC---ACACTCGGACTACAGCCTGGTGTG------------------------GTTAAATGCCT-CAAA------TTTGGTGTTAATTTTTGAACATTCTTTTGCACTATGATACTGTGGTGAC-CACTTTAGTTAAGAAT-CACCAGCCTGGAGAATTCACATCTAA i aotNan1.NW_018494784v1 I 96 C 0 s otoGar3.GL873745 2122916 566 - 2165740 --CACAGACCTTCCTTCACGGATCTCCAGAGTCATTGATCGAGACACAACGTCTCTAGATGCCAAGTCCTTCGCGACAGGGGCATATCGCTCCATAAACCTCTCGCCCTGACTGTTAATGAGAATGCCTCCCTCTCCACGGCATCCTTCTG-TAATGAGACAACCAGCACCATATATGCCTGCAAAAAAATAG-------AT------AGATACATATAACCTAAGGATTGCTAGGTCTATAATTCAAATG---TG---TATTCTTGAAGACATTTTTAGGGGGAGACAGGAAAATGGTATGCCAAGAGCATGATAGGC----AAAAATGAGTAAGAAAG--------AGAAA--AAGTAACAGGAGTAAGTGTGGATAACAAAAAGCACTGACAAAGCTGAC-----------AGGTCTGGGCAGAGTGGTGTCCCCAAAGAGGAAGAAGGACT---------------GCCAAGGCTAGTGGACAAAGCTCTGTTC--AATACTCTGACAGTAGCCCA---TA-----------------------TGCTACATGTAT-CAAA------TTTTGTTTTAATTTTTGATCATTCTTTTGCACCATGATATTGTGGTAACCTACTTTAGGTAAGAAT-AACCAGCTTGGAAAATTCATATCTAA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74333014 525 + 120421639 --TACAGACCTTCCTTCACGGATCTCAAGAGTCATGGATCGAGACACAACATCTCTTGATGCCAGGTCCTTGGCAACAGGTGCGTATCTCTCCATGAACCTTTCACCTTGACTGTTGATGAGAATCCCCCCCTCTCCACGACACCCTTCTG-TGATGAGGCAGCCAGCACCGTATATACCTGTAAAAAT--CC-------AA-TGATTAAATGTTTATAAATGAACGAGCACTAGGAAACTACTTCAAATGGTTAATCCTTCTTTAGAAGCCACTTTTTGGG------------AGTAGACACAAAGAACATTAAACTC----AAAA-----T-AAGAAG--------AAAAGTCAAGTAGGAGAAGGAA-TGTGTGTGACAAGCAGCAGCAACAAACCAGAAAG---CACAAGAGCTTCAGGAACAGCAGCTC------------------------------------ACTC----------ACAGGG-TCTAACA--CATACTCTGACTAAACACCA-------------------------------TCCATGCTTATAGA------TTTAAT----GTTTTTAAATATATCTTTATACCAAGA-AATGCGATAAC-AAGTTTAGGCAGGGATAAAACAACTTAGAGAATTTCTATCTTA i mm10.chr13 C 0 C 0 s canFam3.chr34 11950657 565 + 42124431 CTGACACACCTGCCTTCACGGATTTCCAGAGTCATGGACCGAGATACAACGTCTCTGGATGCCAGGTCCTTTGCGACTGGGGCATATCGCTCCATGAACCTTTCGCCTTGACTGTTAATGAGAATGCCTCCCTCTCCACGGCATCCTTCCG-TAATGAGACAACCAGCACCATATATACCTGCAAAGAA-CCC-------ATTTAATTAGATGTTTATAACCTAACAATTGCTAGGTCTGTATTTCAAATGCA-AA---TTTTTTTCAAGACATTTTT----GGGGAAAGGAAAAAGATATGGAAAGGGCATTGTGCTCCTAAAAGAGTTAGA-CAAAGG--------AAAGGTTAAGGAAGAGT--GAAGTTTTGATAACAAAAAGTACTGACAAAGC---------------------------AGCAG----------GAGGGGAAAGCTCA---------------GCTCCGTGGTGATGACATAGCTCGGCTG--AATATTTCGATGACAACCATGTGTGAACTTTCAACACAACCAAGTACGTGTTAAATATCT-CAGG------CTTCCTTTTAATTTTAGAATGTTGTTTTATACCAAGAAATTGTGATGAG--------GTAGAAAAA--AACAGTTTGGAAAGTTTGTATCTAA i canFam3.chr34 I 36 I 531 s dasNov3.JH577625 364163 579 - 913073 TGCACAAACCTTCCTTCACGGATTTCCACAGTCATGGAACGTGATACGACGTCTCTGGACGCCAGATCCTTTGCAACTGGAGCGTATCTTTCCATAAACCTTTCGCCTTGACTGTTAATAAGAATGCCCCCTTCTCCACGGCACCCTTCCG-TAATAAGACAGCCAACGCCATAAATGCCTGCAAAAAG--CCCAAGTAAAT------AAACACTTGTAACC-AACTACTGCT--GTCTCTATTTCAAAGACACAA----TATTTCCAGGATATGTTT--GGGGATAGAGGAAAAGGGTATGAAAAAGGCATCATAGTA----AAAACATAAT-AAGAAAGACAAAGCAAAAGATTAGA-ATAGTAGGAAATTTTGAAAACAAAAA-CCCTGATGGGGCTCACAG----------------GGAGGAGTGGCACCAACCACAAGAAGAGCGGCCAGGACGAGCCAGCACTGCTC----------ACAAA---CGGGCCTCAAACTTCTAAACACAAGCACGTGTC---------------------------AAACATCT-CAAATGTTACTTTAACTTTAATTTTTCAATGTTCTTTTGCACTATGAAATTGTGGAGAC-TACTTTAGATATGAAG--GACAGCTTGGAAAATTCCTATCAAA i dasNov3.JH577625 C 0 C 0 e colAng1.NW_012116910v1 796515 6480 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1004379.000000 s hg38.chr3_KI270934v1_alt 122220 163 + 163458 GTTACCCAAACAGTGGCAAGAACagtaataatgattattttagttcatctttacactgcacttgctatgggcagttctagctgctttccacatattaaactcatttaagtctt-acaacaactctgggtagtatgaccccctttctcagtgacaagcaaattaa s panTro5.chr3 2592588 163 - 202621043 GTTACCCAAACAGTGGCAAGGACagtaataatgattattttagttcatctttacactgcacttgctatgggcagttctagctgctttccacatattaaactcatttaagtctt-acaacaactctgggtagtacgaccccctttctcagtgacaagcaaattaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 179823 163 - 190779 GTTACCCAAACAGTGGCAAGGACAGTAATAACGATTATTTtagttaatctttacactgcacttgctatgggcagttctagctgctttccacatattaaactcatttaagtctt-acaacaactctgggtagtgcgaccccctttctcagtgacaagcaaattaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 14817 163 + 880730 CTTACCCAAACAGTGGCAAGGACAGTAATAATGATTATTTtagttaatctttatactgcacttgctatgggcagttctagctgctttccacatattaaactcatttaagtctt-acaacaactctgggtagtacgaccccctttctcagtgacaagcaaattaa i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179844462 158 - 180051392 ATTACCCAAACAGTGGCAAGGACagtaataatgattattttacttaatattcacactgcacttgctaggggcagttctagctgctttccaca---t-aactcatttaagtctt-acaacaactctgggtagtactacccgctttctcagtgac-agcaaattac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1313503 158 + 181584905 ATTACCCAAACAGTGGCAAGGACagtaataatgattattttacttaatattcacactgcacttgctaggggcagttccagctgctttccaca---t-aactcatttaagtctt-acaacaactccgggtagtactacccgctttctcagtgac-agcaaattac i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 68548 153 + 100774 ATTACCCAAACAGTGGCAAGGACAGTAATaatga----tttagttaatattcacactgcacttgct-ggggcagttctagctgctttccaca---t-aactcatttaagtctt-acaacaactccgggtagtactacccgctttctcagtgac-agcaaattac i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 28226 161 - 218577 ATTACCCAAACAGTGGCAAGGACagtaataatgattattttacttaatattcactctgcacttgctaggggcagttctagctgctttccacatgtt-aactcatttaagtctt-acaacaactccgggtagtactacccgctttctcagtgac-agcaaattac i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1406580 160 + 91010382 ATTACCCAAACAGTGGCAAGGACagtaataatgattattttagttaatattcacactgcacttgct-ggggcagttctagctgctttccacatgtt-aactcatttaagtctt-acaacaactccgggtagtactacccactttctcattgac-agcaaattac i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 64989 161 + 74206 ATTACCCAAACAGTGGCAAGGACagtaataatgattattttacttaatattcactctgcacttgctaggggcagttctagctgctttccacatgtt-aactcatttaagtctt-acaacaactccgggtagtactacccgctttctcagtgac-agcaaattac i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204163717 152 + 204313951 ATTACCCAAACAGTGGCAAGGTCAGTAAC---AATTATTCTAGTTAAT----ACACTGCatttgccatggacagttctagctgctttccgcctatt-aactcatttaagcttt----acaactccaggtagtaggacccccattctcactgacaagcacattaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16305636 132 + 16417988 ATTACCCAA-----------------------GATTATTCTAGTTAAT----ACACTGtacttgccatgaacggttctaactgctttccgagtatt-aactcatttaagcatt----acagctccaggcagtatgaccctcattgtcactgacaagcgcattca i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 93437 152 - 306014 ATTACCCAAACAGTGGCAAGGACAGTAACGA-AATTATTCTAGTTAAT----ACACTGCACTtgccatggacagttctaactgctttccgaaaatt-aa--catttaagcttt----acagctccaggcagtatggcccccattctcactgacaagcacattaa i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 136486 154 - 211231 ATTA-CCAAACAGTGGCAAGGACAGTAACAATGATTACTCTAGTTAAT----ACACTGCACTtgccacgggcagctctagctgctttccgcgtatt-aactcatttaagcttt----acaactctgggtggtatgaccgccattctcactgacaagcacaataa i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2123482 160 - 2165740 AGTACCCAAATAGCAGCAAGGACAATAATTATTACTGCTatagttaacacttatattgtacttgctagggacagttctagctgctttgc-tatatt-aactcatttaagctttaacaagaaccctaggtactattatc--cattctcagagaaaaacaaattaa i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74333539 120 + 120421639 AGTCCTGAA------------ACAGCAAAAATTATTTTAATGGTTAGTATTTATGTTTCA------------AG------------TCTAAACATT-TACTCATTTCATGTCT-ATGA------TGGGTACTAAGAAGTCTATCCTCAGAGGCAAAAAAAAAAA i mm10.chr13 C 0 I 38 s dasNov3.JH577625 364742 120 - 913073 -----------AGTAACCAAGATAACAACAATTATCGTTACTGCTTAC-------CTGTCCTTGCTATGTACAATTCTAACTGATGCACATATATT-AACAC---TCACCCCC-ATGTCCAC-------AGAACCACCCCC-------------AGTGCACTA- i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 11951222 531 + 42124431 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=666585.000000 s hg38.chr3_KI270934v1_alt 122383 85 + 163458 cgcttggtaa---catcc--agtcatgcagctgaggacagagctcaaacccaaacctgggcagtccgg--cggtctgtgc-cccaaacAGCGG s panTro5.chr3 2592751 85 - 202621043 cgcttggtaa---catcc--agtcatgcagctgaggacagagctcaaacccaaacctgggcagtccgg--cggtctgtgc-ccCAAATAGCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 179986 85 - 190779 cgcttggtaa---catcc--agtcatgcagctgaggacagagctcaaacccaaacctgggcagtccgg--cagtctgtgc-cccaaacAGCGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 14980 85 + 880730 cgcttggtaa---catcc--agtcatgcagctgaggacagagctcaaacccaaacctggccagtccgg--cggtctgtgc-tccaaacAGCGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179844620 85 - 180051392 cgcttggtaa---catcc--agtcatgcagttgaggacacagctcaaacccaaacctgggcagtctgg--cggtctgtgc-tccaaacAGCGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1313661 85 + 181584905 cgcttggtaa---catcc--agtcatgcagttgaggacacagctcaaacccaaacctgggcagtctgg--cggtctgtgc-tccaaacAGCGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 68701 85 + 100774 cgcttggtaa---catcc--agtcatgcagttgaggacacagctcaaacccaaacctgggcagtccgg--cggtctgtgc-tccaaacAGCGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 28387 85 - 218577 cgcttggtaa---cattc--agtcatgcagttgaggacacagctcaaacccaaacctgggcagtccgg--cggtctgtgc-tccaaacAGCGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1406740 85 + 91010382 cgcttggtaa---catcc--agtcatgcagttgaggacacagctcaaacccaaacctgggcagtccgg--cggtctgtgc-tccaaacAGCGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 65150 85 + 74206 cgcttggtaa---cattc--agtcatgcagttgaggacacagctcaaacccaaacctgggcagtccgg--cggtctgtgc-tccaaacAGCGG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204163869 84 + 204313951 tgc-tggtaa---catcc--agtcatgcagctgaggacagagttcaaaccccaacctgggcagcccgg--cggtgtgtgc-tccaaacAGCGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16305768 84 + 16417988 tgc-tggtaa---catcc--agtcatgcagctgaggccagagctcaaaccccaacctgggcagtccgg--tggtctgtgc-tccgaacAGCGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 93589 84 - 306014 tgc-tggtaa---catcc--agtcatgcagccgaggacagagctcaaaccccaacctgggcagtcctg--cggtctgtac-tccaaacAGCGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 136640 84 - 211231 tgc-tggtaa---catcc--agtcatgcagctgaggacagaggtcaaaccccagtccgggcagtccgg--cgctctgcgc-tccaaacAGCGG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2123642 86 - 2165740 agtttagcaac-ccacccatagttatgcagctgaagacagactccaaactcaaacctaagcaatatgg--c---ctatgt-tttcaatcacaa i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 364862 74 - 913073 ----------GTTTGTCC--AGGCACACAG--GAGGACAGAGTCCAAGAGCAGGC--GGGCAGCCAAGGCCCCTCTGTGCACTCTGACAG--- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74333659 38 + 120421639 I e canFam3.chr34 11951222 531 + 42124431 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=413549.000000 s hg38.chr3_KI270934v1_alt 122468 54 + 163458 CTCTGTGACTCCTCAGTGCGATGAGAAACAGGGCGTGCCAAGCTCTCGAATTTT s panTro5.chr3 2592836 54 - 202621043 CTCTGTGACTCCTCAGTGCGATGAGAAACAGGGCGTGCCAAGCTCTCGAATTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 180071 54 - 190779 CTCTGTGACTCCTCAGTGCGATGAGAAACAGGGCGTGCCAAGCTCTCGAATTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 15065 54 + 880730 CTCTGTGACTCCTCAGTGCGATGAGAAACAGGGCGTGCCAAGCTCTCGAATTTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179844705 54 - 180051392 CTCTGTGACTCCTCAAGGCGATGAGAAACAGGGCATGCCTAGCTCTCTAATTTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1313746 54 + 181584905 CTCTGTGACTCCTCAAGGCGATGAGAAACAGGGCATGCCTAGCTCTCTAATTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 68786 54 + 100774 CTCTGTGACTCCTCAAGGCGATGAGAAACAGGGCATGCCTAGCTCTCTAATTTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 28472 54 - 218577 CTCTGTGACTCCTCAAGGCGATGAGAAACAGGGCATGCCTAGCTCTCGAATTTT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1406825 54 + 91010382 CTCTGTGACTCCTCAATGCGATGAGAAACAGGGTATGCCTAGCTCTCTAATTTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 65235 54 + 74206 CTCTGTGACTCCTCACGGCGATGAGAAACAGGGCATGCCTAGCTCTCGAATTTT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204163953 54 + 204313951 CTCTGTGACTCCTCGACGCCATGAAAACCTGGGCATGCTGAGCGCTCAGATTTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16305852 53 + 16417988 CTCTGTGACTCCTCAACG-CATGAAAACCAGGGCATGCCGAGCGCTCAGATTTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 93673 54 - 306014 CTCTGTGACTCCTCAGCGTGATGAAAACCGGGGCATGCCGAGCGCTCAGATTTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 136724 54 - 211231 CTCTGTGACTCCTCGACGCCATGAAAACCTGGGCCTGCTGAGCGCTCACATTTT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2123728 51 - 2165740 tTGTGT---TCCTTAATGTCATGACAAAGAAGAAATGCCAAGCCCTTGAGtttt i otoGar3.GL873745 C 0 I 301 s mm10.chr13 74333697 52 + 120421639 TTTTGTGTC-CTTCAGTGTAAGGAAAGACAAGGGATGCCAAG-TATTGAGTTTT i mm10.chr13 I 38 C 0 s dasNov3.JH577625 364936 50 - 913073 TTCTGCG---TCTCGGTGAGAGGAGGA-CAGGGAGCACCAGGCTCTTGGATGTG i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 11951222 531 + 42124431 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=195783.000000 s hg38.chr3_KI270934v1_alt 122522 35 + 163458 AACAAAGGAGATCAAA--AACC------------CTAAACTAAATGTAT s panTro5.chr3 2592890 35 - 202621043 AACAAAGGAGATCAAA--AACC------------CTAAACTAAATGTAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 180125 35 - 190779 AACAAAGGAGATCAAA--AACC------------CTAAACTAAATGTAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 15119 35 + 880730 AACAAAGGAGATCAAA--AACC------------CTAAACTAAATGTAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179844759 35 - 180051392 AACAAAGGAGATCAAA--AACC------------CGAAAGTAAACGTAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1313800 35 + 181584905 AACAAAGGAGATCAAA--AACC------------CGAAAGTAAACGTAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 68840 35 + 100774 AACAAAGGAGATCAAA--AACC------------CGAAAGTAAACGTAT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 28526 35 - 218577 AACCAAGGAGATCAAA--AACC------------CGAAACTAAACGTAC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1406879 35 + 91010382 AACAAAGGAGATCAAA--AACC------------CGAAACTAAACGTAT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 65289 35 + 74206 AACCAAGGAGATCAAA--AACC------------CGAAACTAAACGTAC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204164007 47 + 204313951 AACAAAGGAGATCAAA--AACCCACAAAAAAACCCTAAACTGAATGTAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16305905 46 + 16417988 AACAAAGGAGATCAAA--AACCCAC-CAAAACCTCTAAACTAAATGTAT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 93727 46 - 306014 AACAAAGGAGATC-AA--AACCCACAAAAACCCCCTAAACTAAATGTAT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 136778 47 - 211231 AACAAACGAGATCAAA--AACCCACAAAAAACCCCTAAACTAAATGTAG i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74333749 25 + 120421639 AAGGGAAGAGA-----------------------CTAAGTAAGGGTTA- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 364986 31 - 913073 GGTGAAGGAGACCAAAGCAATT------------TACTATCAG------ i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 11951222 531 + 42124431 I e otoGar3.GL873745 2123779 301 - 2165740 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=482168.000000 s hg38.chr3_KI270934v1_alt 122557 56 + 163458 TTCAAAAGCTACAATTTTTATTAGTATACAAAAAGGGCAATCTTGCTTTCAAGACA s panTro5.chr3 2592925 56 - 202621043 TTCAAAAGCTACAATTTTTATTAGTATACAAAAAGGGCAATCTTGCTTTCAAAACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 180160 56 - 190779 TTCAAAAGCTACAATTTTTATTAGTATACAAAAAGGGCAATCTTGCTTTCAAAACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 15154 53 + 880730 TTCAAAAGCTACAATTTTTAT---TATACAAAAAGGGCAATCTTGCTTTCAAAATA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179844794 56 - 180051392 TTCAAAAGCTACAATTTTTATTAGTATACAAAAAGGGCAATCTTGCTTTTAAAACG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1313835 56 + 181584905 TTCAAAAGCTACAATTTTTATTAGTATACAAAAAGGGCAATCTTGCTTTTAAAACG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 68875 56 + 100774 TTCAAAAGCTACAATTTTTATTAGTATACAAAAAGGGCAATCTTGCTTTTAAAACG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 28561 56 - 218577 TTCAAAAGCTACAATTTTTATTAGTATACAAAAAGGGCAATCTTGCTTTTAAAACA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1406914 56 + 91010382 TTCAAAAGCTACAATTTTTATTAGTATACAAAAAGGGCAATCTTGCTTTTAAAACG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 65324 56 + 74206 TTCAAAAGCTACAATTTTTATTAGTATACAAAAAGGGCAATCTTGCTTTTAAAACA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204164054 56 + 204313951 TTCAAAAGCTACAATTTGTATTAGAATACAAAAAGGGCAATCTTGCTTTTAAAACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16305951 55 + 16417988 TTCAAAAGCTACAATTTGTATTAGAATA-AAAAAGGGGAATCTTGCTTTTAAAACA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 93773 54 - 306014 TTCAAAAGCTACAATTTGTATTAGAATA-AAAAAGGG-AATCTTGCTTTTAAAACA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 136825 56 - 211231 TTCAAAAGCTACAGTTTGTATTCGAATACAAAAAGGGCAATCTTGCTTTTCAAACA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2124080 56 - 2165740 TTCAAAAGCTAATACTTTCATTAGTACAACAAAAGGGTTATCTTGCTTTTAAAGCA i otoGar3.GL873745 I 301 C 0 s mm10.chr13 74333774 51 + 120421639 TTTTAAAGCCA-GTTTTCCTTTCATATGCCAAAAGGTTA--CATGCTCTAAAAG-- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 365017 52 - 913073 TTTGAAAGCAAAAACTTTCATTACTATACCAAAAGTGC---CTTACTTT-AAAACA i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 11951222 531 + 42124431 I e colAng1.NW_012116910v1 796515 6480 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1635813.000000 s hg38.chr3_KI270934v1_alt 122613 181 + 163458 AGAATGTG-ATTCTTGCATCTCACCTGCCTTTTGATTTTCTAAGTTTCCATGCTC-TTTTTTCT---GTGG-TTACTTCTCACATATTGAAGACAAAGCATGAGAAGTGGAGCTCTAA----------------------------------GCAAATTACA-GA---GGGAATTCAGGGG-CTCACTGACATTTTG---CTGATTAAAAACAGTAAT---------AAAAAATACAA s panTro5.chr3 2592981 181 - 202621043 AGAATGTG-ATTCTTGCATCTCACCTGCCTTTTGATTTTCTAAGTTTCTATGCTC-TTTTTTCG---GTGG-TTACTTCTCACATATTGAAGACAAAGCATGAGAAGTGAAGCTCTAA----------------------------------GCAAATTACA-GA---GGGAAGTCAGGGG-CTCAGTGACATTTTA---CTGATTAAAAACAGTAAT---------AAAAAATACAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 180216 181 - 190779 AGAATGTG-ATTCTTGCATCTCACCTGCCTTTTGATTTTCTAAGTTTCCATGCTC-TTTTTTCG---GTGG-TTACTTCTCACATATTGAAGACAAAGCATGAGAAGTGGAGCTCTAA----------------------------------GCAAATTACA-GA---GGGAATTCAGGGG-CTCAGTGACATTTTA---CTGATTAAAAACAGTAAT---------AAAAAATACAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 15207 181 + 880730 AGAATGTG-ATTCTTGCATCTCACCTGCCTTTTGATTTTCTAAGTTTCCATGCTC-TTTTTTCT---GTGG-TTACTTCTCACATATTGAAGACAAAGCATGAGAAGTGGAGCTCCAA----------------------------------GCAAATTACA-GA---GGGAATTCAGGGG-CTCAGTGACATTTTA---CTGATTAAAAACAGTAAT---------AAAAAATACAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179844850 184 - 180051392 AGAATGTG-ATTCTTGCATCTTGCCTGTCTTTTGATTTTCTAAGTTTCAATGCTCTTTTTTTCT---GTGGATTACTTCTCAAATATTGAAGACAAAGCATGAGAAGTGGAGCTCTAA----------------------------------GCAAATTACA-GA---GGGAATTCAGGGA-CTCAGTGACATTCTA---TTGATTAAAAAAAGTAATA--------AAAAAATACAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1313891 184 + 181584905 AGAATGTG-ATTCTTGCATCTTGCCTGTCTTTTGATTTTCTAAGTTTCAATGCTCTTTTTTTCT---GTGGATTACTTCTCACATATTGAAGACAAAGCATGAGAAGTGGAGCTCTAA----------------------------------GCAAATTACA-GA---GGGAATTCAGGGA-CTCAGTGACATTCTA---TTGATTAAAAAAAGTAATA--------AAAAAATACAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 68931 184 + 100774 AGAATGTG-ATTCTTGCATCTTGCCTGTCTTTTGATTTTCTAAGTTTCAATGCTCTTTTTTTCT---GTGGATTACTTCTCACATATTGAAGACAAAGCATGAGAAGTGGAGCTCTAA----------------------------------GCAAATTACA-GA---GGGAATTCAGGGA-CTCAGTGACATTCTA---TTGATTAAAAAAAGTAATA--------AAAAAATACAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 28617 183 - 218577 AGAATGTG-ATTCTTGCATCTCGCCTGTCTTTTGATTTTCTAAGTTTCAATGCTC-TTTTTTCT---GCGGATTACTTCTCACATATTGAAGACAAAGCATGAGAAGTGGAGCTCTAA----------------------------------GCAAATTACA-GA---GGGAATTCAGGGA-CTCAGTGACATTCTA---TTGATTAAAAAAAGTAATA--------AAAAAATACAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1406970 183 + 91010382 AGAATGTG-ATTCTTGCATCTCACCTGTCTTTTGATTTTCTAAGTTTCAATGCTC-TTTTTTCT---GTGGATTACTTCTCACATATTGAAGACAAAGCATGAGAAGTGGAGCTCTAA----------------------------------GCAAATTACA-GA---GGGAATTCAGGGG-CTCAGTGACATTTTA---TTGATTAAAAAAAGTAATA--------AAAAAATACAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 65380 183 + 74206 AGAATGTG-ATTCTTGCATCTCGCCTGTCTTTTGATTTTCTAAGTTTCAATGCTC-TTTTTTCT---GTGCATTACTTCTCACATATTGAAGACAAAGCATGAGAAGTGGAGCTCTAA----------------------------------GCAAATTACA-GA---GGGAATTCAGGGA-CTCAGTGACATTCTA---TTGATTAAAAAAAGTAATA--------AAAAAATACAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 802995 182 - 1687011 AGAATGTG-ATTCTTGCATCTCACCTGTCTTTTGATTTTCTAAGTTTCAATGCTC-TTTTTTCT---GTGGATTACTTCTCACATATTGAAGACAAAGCACGAGAAGTAGAGCTCTAA----------------------------------ACAAATTACA-GA---GGGAATTCAGAGG-CTCAGTGACATTTTA---TTGATTAAAAAAAGTAAT---------AAAAAATACAA i colAng1.NW_012116910v1 M 6480 C 0 s calJac3.chr2 204164110 183 + 204313951 AGAATGTG-ATTCTCGTATCTCACCTGCCTTTTGATTTTCTAAGTTTCAATGCTCTTTTTTTTTTGTGTGGATAGCTTCTCACATATTGAAGACAAAGCATGAGAAGTGGAGCTCTAA----------------------------------GCAAATTACA-GA---GGAAATTCAGGAG-GTCAGTGACATTTGA---TCGGTTAAAAACAGTAAT---------AATAAAC---A i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16306006 177 + 16417988 AGAATGTG-ATTCTTGCATCTCACCTGCCTTTTAATTTTCTAAGTTTCAATGCTCTTTTTTTTTTCAATG------CCCTCACATATTGAAGACAAAGCCTGAGAAGTGGAGCTCTAA----------------------------------GCAAATTACA-GA---GGAAATTCAGGAG-GTCAGTGACATTTTA---TTGGTTAAAAACAGTATT---------AAAAAAC---A i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 93827 176 - 306014 AGAATGTG-ATTCTTGCATCTCACCTGCCTTTTGATTTTCTAAGTTTCAATGCTC-TTTTTTTTTCAATG------CCCTCACATATTGAAGACAAAGCATGAGAAGTGGAGCTCTAA----------------------------------GCAAATTACA-GA---GGAAATTCAGGAG-GTCAGTGACATTTTA---TTGGTTAAAAACAGTAAT---------AAAAAAC---A i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 136881 180 - 211231 AGAATGTG-GTTCTTGCATCTCACCTGCCTTTTGATTTTCTAAGTTTTACTGCTCTTTTTTTTT---GTGGATTTCTTCTCACATATTGAAGACAAAGCATGAGAAGTGGAGCTCTAA----------------------------------GCAAATTACA-GA---GGAAATTCCGGAG-GTCAGTGACATTTTA---TCGGTTAAAAACAGTAAT---------AAAAAAC---A i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2124136 230 - 2165740 AGAATGAA-ATTCTTGCATTTCATCTGCCTTCCAGTTTTCCTAGTTTCAATGGTA--TTTTTTG---GTGGTTTATTTCTCATACACTGGAAAAGAAACATAAGAAATGGAGGTATAATACggctcggtgtctgttgctcagcggctagggtactagccaca-cacactggagctcgtgtg-ctcaaatccagcctgggcctgccaaatgacaatgacaactacaaccaaaaaaaaac i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74333825 153 + 120421639 -------------------------TGCTTTTCACTTTTCATAGCTTCAGTAACA-TCTGTCGG---GTAGTTTA-TTTTTATATATTGTAAAGAAAGTATAAGAAATGAAGTGCTAA----------------------------------ACACAGTATGTGA---CTGGCTCCAGAGG-CTCAGAGACA--------CTAGACAGAAACTGAAGT---------AAGAAAACTAA i mm10.chr13 C 0 C 0 s dasNov3.JH577625 365069 179 - 913073 GGAATGAATGTTCTTGCATTTTATCTGCCTGTCAATTGTCCTAATTTCACTGGCATTTTTTTTA---GCAGCTTGTTTCTCAAACATTGAAGAGGAAGTATAAGAAAGGTGGTGCTAA----------------------------------AC------TA-GA---GGGAATTCACAAGTCTCAATGAGatttta---ttgaataaaaatagtaat---------aaaaaatacaa i dasNov3.JH577625 C 0 I 2350 e canFam3.chr34 11951222 531 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=13600.000000 s hg38.chr3_KI270934v1_alt 122794 1 + 163458 C s panTro5.chr3 2593162 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 180397 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 15388 1 + 880730 C i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179845034 1 - 180051392 C i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1314075 1 + 181584905 C i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 69115 1 + 100774 C i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 28800 1 - 218577 C i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1407153 1 + 91010382 C i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 65563 1 + 74206 C i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 803177 1 - 1687011 C i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204164293 1 + 204313951 C i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16306183 1 + 16417988 C i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 94003 1 - 306014 C i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 137061 1 - 211231 C i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2124366 1 - 2165740 c i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74333978 1 + 120421639 C i mm10.chr13 C 0 I 246 e dasNov3.JH577625 365248 2350 - 913073 I e canFam3.chr34 11951222 531 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1115954.000000 s hg38.chr3_KI270934v1_alt 122795 134 + 163458 Aggccgggtgcagtggctcatggctataatgccagcaccctgaggggccgaggcaggaggatcgcctaagccctggcgtttgaga----------------------------ccagcctgggcttaaaatggtgacaccctgtctctacc-aaa-----aac-aaaaa s panTro5.chr3 2593163 134 - 202621043 Aggccgggtgcagtggctcatggctataatgccagcaccttgacgggccaaggcaggaggatcgcctaagccctggcgtttgaga----------------------------ccagcctgggcttaaaatggtgacaccctgtctctacc-aaa-----aac-aaaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 180398 134 - 190779 Aggccgggtgcagtggctcatggctataatgccagcaccctgacgggccaaggcaggaggatcgcctaagccctggcgtttgaga----------------------------ccagcctgggcttaaaatggtgactccctgtctctacc-aaa-----aac-aaaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 15389 135 + 880730 Aggccgggtgcagtggctcatggctataatcccagcaccctgaggggcctaggcaggaggatcacctaagccctggcatttgaga----------------------------ccagcctgggcttaaaatggtgacaccctgtctctacc-aaa-----aacaaaaaa i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179845035 132 - 180051392 Agaccaggtgcagtggctcatggctataatcccagcactctgaggggccgaggcaggaggatcgcctaagccctggagtttgaga----------------------------ccagcctgggc--aaaacggtgacaccccatctctacc-aaa-----aac-aaaac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1314076 132 + 181584905 Agaccaggtgcagtggctcatggctataatcccagcactctgaggggccgaggcaggaggatcgcctaagccctggagtttgaga----------------------------ccagcctgggc--aaaacggtgacaccccatctctacc-aaa-----aac-aaaac i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 69116 132 + 100774 Agaccaggtgcagtggctcatggctataatcccagcactctgaggggctgaggcaggaggatcgcctaagccctggagtttgaga----------------------------ccagcctgggc--aaaacggtgacaccccatctctacc-aaa-----aac-aaaac i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 28801 132 - 218577 Aggccgggtgcagtggctcatggctataatcccagcactctgaggggccgaggcaggaggatcgcctaagccctggagtttgaga----------------------------ccagtctgggc--aaaacggtgacaccccgtctctacc-aaa-----aac-aaaac i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1407154 132 + 91010382 Aggccgggtgcagtggctcatggctataatcccagcactctgaggggccgaggcaggaggatcgcctaagccctggagtttgaga----------------------------ccagcctgggc--aaaacggtgacaccccgtctctacc-aaa-----aac-aaaac i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 65564 132 + 74206 Agaccaggtgcagtggctcatggctataatcccagcactctgaggggccgaggcaggaggatcgcctaagccctggagtttgaga----------------------------ccagcctgggc--aaaacggtgacaccccgtctctacc-aaa-----aac-aaaac i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 803178 133 - 1687011 Agaccaggtgcagtggctcatggctataatcccagcactctgaggggccgaggcaggaggattgcctaagccctggagtttgaga----------------------------ccagcctgggc--aaaacggtgacaccccgtctctaccaaaa-----aac-aaaac i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204164294 137 + 204313951 Aggctaggcgcggtggctcatgcctggaatcccagcactctgggaggctggggcaggtggattccttaagctcaggagtttgaga----------------------------tcagcctgggc--aaaatggtgaaaccatgtctctgcc-aaaaaaataaa-aaata i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16306184 132 + 16417988 Aggctaggggcggtggctcatgcctgtaatccctgcactctgggaggctgaggcaggtggactgcttaagcccaggagtttgaga----------------------------ccagtctgggc--aaaatggtgaaaccctgtctctacc-aaa-----aaa-aaaaa i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 94004 134 - 306014 Aggctaagtgcagtggctcatgcctgtaatcccaacactctaggaggctgaggcaggtggattgcttaagcccaggagtttgaga----------------------------ccagtctgggc--aaaatggtgaaaccctgtctctacc-aaaaa---aaa-aaaaa i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 137062 132 - 211231 Aggctaggcgcggtggctcatgccggtaatcccagcactctgggaggccgaggcaggtggattgcttaagcccaggagtttgaga----------------------------tcagtctgggc--aaaatggtgaaaccctgtctctaac-aac-----aac-aacaa i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2124367 160 - 2165740 cagctgggtgttgtggtgggcgcctgtaatcccagctacttgggaggctgaggcaagagaattgcttaagcccaggagtttgaagttgctgtgagctgtgacaccatagcactctacccagggt--gacatactgagattctgtctcaaaa-aaa-----aag-aaaaa i otoGar3.GL873745 C 0 I 144 e mm10.chr13 74333979 246 + 120421639 I e dasNov3.JH577625 365248 2350 - 913073 I e canFam3.chr34 11951222 531 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=622073.000000 s hg38.chr3_KI270934v1_alt 122929 75 + 163458 aaccct-------caaaaat-ta---------------------------gctgggcatggtaacacatgcctgtagtcccagctatttgggaggctgaggtgcaaggat s panTro5.chr3 2593297 75 - 202621043 aaccct-------caaaaat-ta---------------------------gctgggcatggtaacacatgcctgtagtcccagctatttgggaggctgaggtggaaggat i panTro5.chr3 C 0 I 20 s panPan2.chrUn_NW_014024201v1 180532 75 - 190779 aaccct-------caaaaat-ta---------------------------gctgggcatggtaacacatgcctgtagtcccagctatttgggaggctgaggcggaaggat i panPan2.chrUn_NW_014024201v1 C 0 I 20 s gorGor5.CYUI01015759v1 15524 75 + 880730 aaccct-------caaaaat-ta---------------------------gatgggcatggtaacacatgcctgtagtcccagctgtttgggaggctgaggtggaaggat i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179845167 75 - 180051392 aaccct-------caaaaat-ta---------------------------gccgggcgtggtaacacatgcctgtagtcccagccgtttgggaggctgaggtggaaggat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1314208 75 + 181584905 aaccct-------caaaaat-ta---------------------------gccgggcgtggtaacgcatgcctgtagtcccagccgtttgggaggctgaggtggaaggat i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 69248 75 + 100774 aaccct-------caaaaat-ta---------------------------gccgggcgtggtaacgcatgcctgtagtcccagccgtttgggaggctgaggtggaaggat i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 28933 75 - 218577 aaccct-------caaaaat-ta---------------------------gccaggcatggtaatgcatgcctgtagtcccagccgtttgggaggctgaggtggaaggat i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1407286 75 + 91010382 aaccct-------caaaaat-ta---------------------------gctgggcatggtaacgcatgcctgtagtcccagccgtttgggacgctgaggtggaaggat i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 65696 75 + 74206 aaccct-------caaaaat-ta---------------------------gccaggcatggtaatgcatgcctgtagtcccagccgtttgggaggctgaggtggaaggat i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 803311 75 - 1687011 aaccct-------caaaaat-ta---------------------------gctgggcatggtaacgcatgcctgtagtcccagccgtttgggaggctgaggtggaaggat i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204164431 70 + 204313951 a-------------aaaaataaa---------------------------gctgggcatggtaatgtatgcctgtagtctcagctgtttgggaggctgaggtggaaggat i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16306316 69 + 16417988 a-------------aaaaat-ta---------------------------gctgggcatgataacgcatgcttgtagtctcagctgtttgggaggctgaggtggaaggat i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 94138 69 - 306014 a-------------aaaaat-ta---------------------------tctgggcatggtaacgcatgcctgtagtctcagctgtttgggaggctgaggtggaaagat i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 137194 69 - 211231 a-------------aaaaat-ta---------------------------gctggccatggtaatgtatgcctgtcgtctcagctgtttgggaggctgaggtggaaggac i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2124671 109 - 2165740 agccctggccaaaaaaaaat-aataataataacaacaaataatCCAACAgactgggtgtgttgactcatgactgaaatcctagcactttgggaagctgaggcaggatgac i otoGar3.GL873745 I 144 C 0 e mm10.chr13 74333979 246 + 120421639 I e dasNov3.JH577625 365248 2350 - 913073 I e canFam3.chr34 11951222 531 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=554418.000000 s hg38.chr3_KI270934v1_alt 123004 86 + 163458 cgtttgagcctgggag----------------------------------------------------------------------------acaa--------------------------------------------------------aggctgcagtgagtcaagattgctccactgcac----tccagcctgggcaacagagcaagaccccatctc s gorGor5.CYUI01015759v1 15599 86 + 880730 cgtttgagcctgggag----------------------------------------------------------------------------acaa--------------------------------------------------------aggctgcagtgagtcaagattgctccactgcac----tccagcctgggcaacagagcaagaccccatctc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179845242 86 - 180051392 cctttgagcctgggag----------------------------------------------------------------------------acaa--------------------------------------------------------aggctgcagtgagccaagactgctccactgcac----tccagcctgggcaatagagcaagaccccgtctc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1314283 86 + 181584905 cctttgagcctgggag----------------------------------------------------------------------------acaa--------------------------------------------------------aggctgcagtgagccaagactgctccactgcac----tccagcctgggcaacagagcaagaccccgtctc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 69323 83 + 100774 cctttgagcctgggag----------------------------------------------------------------------------acaa--------------------------------------------------------aggctgcagtgagccaagactgctccactgcac----tccagcctg---aatagagcaagaccccgtctc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 29008 86 - 218577 cctttgagcctgggag----------------------------------------------------------------------------acaa--------------------------------------------------------aggctgcagtgagccaagactgctccactgcac----tccagcctgggcaacagagcaagaccccgtctc i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1407361 86 + 91010382 cctttgagcctgggag----------------------------------------------------------------------------acaa--------------------------------------------------------aggctgcagtgagccaagactgctccactgcac----cccagcctgggcaatagagcaagaccccgtctc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 65771 86 + 74206 cctttgagcctgggag----------------------------------------------------------------------------acaa--------------------------------------------------------aggctgcagtgagccaagactgctccactgcac----tccagcctgggcaacagagcaagaccccgtctc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 803386 86 - 1687011 tctttgagcctgggag----------------------------------------------------------------------------acaa--------------------------------------------------------aggctgcagtgagccaagactgctccactgcac----tccagcctgggcaacagagcaagaccccgtcac i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204164501 88 + 204313951 tgtttgagtccgggag----------------------------------------------------------------------------gcac--------------------------------------------------------tggctgcggtgagacaagactgctccactgcactccatccagcctgg--aacagagcaagaccctatctc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16306385 86 + 16417988 tgtttgagtctgggag----------------------------------------------------------------------------gcac--------------------------------------------------------tggctgcagtgagccaagattgctctactgcac----tccagcctgggcaacagagcaagaccctatctc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 94207 86 - 306014 tgttcgagtctgggag----------------------------------------------------------------------------gcac--------------------------------------------------------tggctgcagtgagccaagattgctccactgcac----tccagcctgggcaacagagcaagaccctatctc i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 137263 86 - 211231 tgtctgagtctgggag----------------------------------------------------------------------------gcac--------------------------------------------------------tggctgcagtgagccaagattgctccactgcac----tccagcctgggcaacagagcaagaccctatctc i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2124780 218 - 2165740 tgcttgaggccaggagtttaagaatagcctgagcaacctagggagaccccatctccacaaaatgttaaaaaattagctggatatggtgataaacaactatagtcccagctactcaggaggctgaggcaggatcactggaaaccagatgtctgaggttacagtgagctataactgcaccactgcac----tctagcctaggcaacagagcaaaaccccattta i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74333979 246 + 120421639 I e dasNov3.JH577625 365248 2350 - 913073 I e canFam3.chr34 11951222 531 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=68957.000000 s hg38.chr3_KI270934v1_alt 123090 10 + 163458 taaacaaa--tt s gorGor5.CYUI01015759v1 15685 10 + 880730 taaacaaa--tt i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179845328 10 - 180051392 taaacaaa--tt i rheMac8.chr6 C 0 I 2 s macFas5.chr6 1314369 10 + 181584905 taaacaaa--tt i macFas5.chr6 C 0 I 3 s macNem1.NW_012013899v1 69406 10 + 100774 taaacaaa--tt i macNem1.NW_012013899v1 C 0 I 3 s cerAty1.NW_012004452v1 29094 10 - 218577 taaacaaa--tt i cerAty1.NW_012004452v1 C 0 I 3 s chlSab2.chr4 1407447 10 + 91010382 taaacaaa--tt i chlSab2.chr4 C 0 I 3 s manLeu1.NW_012101728v1 65857 12 + 74206 taaacaaatttt i manLeu1.NW_012101728v1 C 0 I 3 s colAng1.NW_012116910v1 803472 10 - 1687011 taaacaaa--tt i colAng1.NW_012116910v1 C 0 I 837 s calJac3.chr2 204164589 10 + 204313951 taaacaaa--TT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16306471 11 + 16417988 taaacaaa-TTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 94293 11 - 306014 taaacaaa-TTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 137349 10 - 211231 taaacaaa--tt i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2124998 10 - 2165740 aaaacaaa--ca i otoGar3.GL873745 C 0 I 4 s canFam3.chr34 11951753 10 + 42124431 taaataaa--tC i canFam3.chr34 I 531 I 4 e mm10.chr13 74333979 246 + 120421639 I e dasNov3.JH577625 365248 2350 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=1249321.000000 s hg38.chr3_KI270934v1_alt 123100 215 + 163458 aaa-----------------------aaaaaaaCCTACAACAAATCCATTTCTTA-TTTTCATCCCTTCCAGGGATCAGAAAGCTGACACT--GACAG--AG-AAAGAGAAGACACAGGTCTGGTTCTTTGGCA------------CCACTTCA----GGGGTCTCCATC-GTCCACAGGTCAGAAAAGCAACC--CAGAAAAGTC----CAGGACGAGTCACCTCAAACAAGAGGCAGA----CGTGTGTGTGTCTGTCTCTGACTCATT- s gorGor5.CYUI01015759v1 15695 211 + 880730 aaa-----------------------aaaaaaaCCTACAACAAATCCATTTCTTA-CTGTCATCCCTTCCAGGGATCAGAAAGCTGACACT--GACAG--AG-AAAGAGAAGACACAGGTCTGGTTCTTTGGCA------------CCACTTCA----GGGGTCTCCATC-GTCCACAGGTCAGAAAAGCAACC--CAGAAAAGTC----CAGGACAGGTCACCTCAAAC--GAGGCAGA------TGTGTGTGTCTGTCTCTGACTCATT- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179845340 210 - 180051392 aaa-----------------------aaaaaaaCCTACAACAAATTCATTTCTTA-TTTTCATCCCTTCCAGGGACCAGAAAGCTGACACT--GACAG--AG-AAAGAGAAGGCACAGGTCTGGTTCTTTAGCA------------CCACTTCA----GGGGTCTCCATC-GTCCACAGGTCAGAAAAGCAACC--CAGAAAAGTC----CAGGACGAG-----TCAAACAAGAGGCAGA----TGTGTGTGTGTCTCTCTCTGACTCATT- i rheMac8.chr6 I 2 C 0 s macFas5.chr6 1314382 208 + 181584905 aaa-----------------------aaaaaaaCCTACAACAAATTCATTTCTTA-TTTTCATCCCTTCCAGGGACCAGAAAGCTGACACT--GACAG--AG-AAAGAGAAGGCACAGGTCTGGTTCTTTAGCA------------CCACTTCA----GGGGTCTCCATC-GTCCACAGGTCAGAAAAGCAACC--CAGAGAAGTC----CAGGACGAG-----TCAAACAAGAGGCAGA------TGTGTGTGTCTCTCTCTGACTCATT- i macFas5.chr6 I 3 C 0 s macNem1.NW_012013899v1 69419 208 + 100774 aaa-----------------------aaaaaaaCCTACAACAAATTCATTTCTTA-TTTTCATCCCTTCCAGGGACCAGAAAGCTGACACT--GACAG--AG-AAAGAGAAGGCACAGGTCTGGTTCTTTAGCA------------CCACTTCA----GGGGTCTCCATC-GTCCACAGGTCAGAAAAGCAACC--CAGAGAAGTC----CAGGACGAG-----TCAAACAAGAGGCAGA------TGTGTGTGTCTCTCTCTGACTCAtt- i macNem1.NW_012013899v1 I 3 I 689 s cerAty1.NW_012004452v1 29107 223 - 218577 aaaaa----------------aaac-aaaaaaaCCTACAACAAATTCATTTCTTA-TTTTCATCCCTTCCAGGGACCAGAAAGCTGACACT--GACAG--AG-AAAGAGAAGGCACAGGTCTGGTTCTTGAGCA------------CCACTTCA----GGGGTCTCCATC-GTCCACAGGTCAGAAAAGCAACC--CAGAGAAGTC----CAGGACGAGTCACCTCAAACAAGAGGCAGA--TGTGTGTGTGTCTCTCTCTCTGACTCATT- i cerAty1.NW_012004452v1 I 3 C 0 s chlSab2.chr4 1407460 224 + 91010382 aaaaa----------------aaacaaaaaaaaCCTACAACAAATTCATTTCTTA-TTTTCATCCCTTCCAGGGATCAGAAAGCTGACACT--GACAG--AG-AAAGAGAAGGCACAGGTCTGGTTCTTTAGCA------------CCACTTCA----GGGGTCTCCATT-GTCCACAGGTCAGAAAAGCAACC--CAGAGAAGTC----CAGGACGAGTCACCTCAAACAAGAGGTAGA--TGTGTGTGTCTCTCTCTCTCTGACTCATT- i chlSab2.chr4 I 3 C 0 s manLeu1.NW_012101728v1 65872 223 + 74206 aaaaa----------------aaac-aaaaaaaCCTACAACAAATTCATTTCTTA-TTTTCATCCCTTCCAGGGACCAGAAAGCTGACACT--GACAG--AG-AAAGAGAAGGTACAGGTCTGGTTCTTTAGCA------------CCACTTCA----GGGGTCTCCATC-GTCCACAGGTCAGAAAAGCAACC--CAGAGAAGTC----CAGGACGAGTCACCTCAAACAAGAGGCAGA--TGTGTGTGTGTCTCTCTCTCTGACTCATT- i manLeu1.NW_012101728v1 I 3 C 0 s colAng1.NW_012116910v1 804319 214 - 1687011 AAA-----------------------AAAAAAACCTACAACAAATTCATTTCTTA-TTTTCATCCCTTCCAGGGATCAGAAAGCTGACACT--GACAG--AG-AAAGAGAAGGCACATGTCTGGTTCTTCAGCA------------CCACTGCA----GGGGTCTCCATC-GTCCACAGGTCAGAAAAGCAA-C--CAGAGAAGTC----CAGGACGGGTCACCTCAAACAAGAGGCAGA----TGTGTGTGTGTCTCTCTCTGACTCATT- i colAng1.NW_012116910v1 I 837 C 0 s calJac3.chr2 204164599 210 + 204313951 --------------------------ACAAAACCCCACGACAAATACATTTTTTA-TTTTCATCCCTGCCAGGGATCAGAAAGATGCCACT--GAGAG--AG-AAAAAGAAGACACAGGTCTGGTTCCTTAGCA------------CCACTACA----GGGGTCTCTGTA-GTCCACAAGTTAGAAAAGCAATC--CAGGAAAGTCACATCACGACGAGTCACATCAAACAAGAGGCAGA----TG------TGTCTCTCTCTGACTCATT- i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 16306482 196 + 16417988 --------------------------TTTGAAATCCACAACAAATACATTTTTTA-TTTTCAGCCCTGCCAGGGATCAGAAAGATGACACTGAGAGAG--AG-AAAGAGAAGACACAGGTCTGGTCCTTTAGCA------------CCACTGCA-----GGGTCTGCGCA-GTCCACAGGTCAGAAAAGCAATC--CAGGAA---------------AGTCACATCAAACAAGAGGCACA----TG------TCTCTCTCTCTGACTCATT- i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 94304 199 - 306014 --------------------------TTTAAAACCCACAACAAATACATTTTTTA-TTTTCAGCCCTGCCAGGGATCAGAAAGATGACACT--GAGAG--AG-AAAGAGAAGACACAGGTCTGGTCCTTTAGCA------------CCACTGCA----GGGGTCTCCGTA-GCCCACAGGTCAGAAAAGCAATC--CAGGAA---------------AGTCACATCAAAC--GAGGCAGA----TGTGTATCTCTCTCTCTCTGACTCATT- i cebCap1.NW_016108150v1 C 0 I 1 s aotNan1.NW_018494784v1 137359 211 - 211231 --------------------------aaaaaaCCCCACAACAAATACA-TTTTTA-TTTTCATCCCTGCCAGGGATCAGAAAGATGACACT--GAGAG--AG-AAAAAGAAGACACGGGTCTGGTTCTTTAGCA------------CCACTACA----GGGGTCTCCGTA-GCCCACAAGTCAGAAAAGCAATC--CAGGAAAGTCACATCACGACGAGTCACATCAAACTAGAGGCAGA----TGTG----AGTCTCTCTCTGACTCATT- i aotNan1.NW_018494784v1 C 0 I 1 s otoGar3.GL873745 2125012 216 - 2165740 aaaaaCATTACCAAAACAATTAAAC-TACAAAAGCCCCAACAAATACATTTTTTGTTTTTCATCCCTGCCAGGAATGAGA-------TACC--GACAGCAAA-GAGGGGGAAAAAAGGGTCTGGTTCTTCAGTA--------------------------------------TTCATAAGTCAGAAAAGCAATC--CAAAAAGAAT----TCAGCAGCATCACCTAGGATGAAAGGGAGATCTGTGTGTGTGTCTATCTCTCAGATTCATT- i otoGar3.GL873745 I 4 I 1 s canFam3.chr34 11951767 209 + 42124431 --------------------------AAGAAGCAAAACTACTTAAACATTTTTAT-TTTTCAT--CTGTCAGGGATCAGAAAAAATATACT--GACAG--AGCAAAGAGAAAAAACAGATCTGGTTCTGTAGCAAGGTGGGTGGTACTGCCATAAAGTGTGGTGTCCCTCAGTTGATAGATCAGAAAAGCAATCAGAAAGAAAGTC----CAGAATGAGACTCATC--------------------------TCTCCTTCTCTGATTCACTT i canFam3.chr34 I 4 C 0 e mm10.chr13 74333979 246 + 120421639 I e dasNov3.JH577625 365248 2350 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=1265226.000000 s hg38.chr3_KI270934v1_alt 123315 250 + 163458 TTGAAGAACCTCCTCCAAACTCAAGACTTCAACTGTCATTTCTGAGTTAATGTCTCCAAATTGCACATTCGTAACCTCAACCGTCAGACGTCCCCAAGACGAGCTCATCTTCCCCACGAC-AAGCTCCCTCAGTGGTCACGTGGGCTGAG-CCCAGCGCCC-AACGTCACATGGGGTT-----CTCTCATGGCTGTGTCTTAACTTTACATCCCATTGTCACGGAAGCTCTGTGTTGT-CCTACAAAGCTGAAATCTGC s gorGor5.CYUI01015759v1 15906 250 + 880730 TTGAAGAACCTCCTCCAAACTCAAGACTTCAACTGTCATTTCTGAGTTAATGTCTCCAAGTTGCACATTCGTAACCTCAACCGTCAGACGTCCCCAAGACGAGCTCATCTTCCCCACGAC-AAGCTCCCTCAGTGGTCACGTGGGCTGAG-CCCAGCGCCC-AATGTCACGTGGGGTT-----CTGTCATGTCTGTGTCTTAACCTTACATCCCATTGTCACGGAAGCTCCGTGTTCT-CCTACACAGCTGAAATCTGC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179845550 251 - 180051392 CTGAAGAATCTCCCCCAAACTCAAGACTTCAACTGTCATTTCTGTGTGAATGTCTCCAAACTGCACATTCGTAAGCTCAACCGTCAGACGTCCCCGAGATGAGCGCATCTTCCCCACAAC-AAGCTCCCTCAGTGGTCGTGTGGGCGGAGCCCCAACGTCCGAACGTCACACGGGGTT-----CTGTCACGGCCGTGCCCTAACTTTACACCCCATTATCGCGGAAGCTCTGTGTTC--CCTACAAAGCTGAAATCTGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1314590 252 + 181584905 CTGAAGAACCTCCCCCAAACTCAAGACTTCAACTGTCATTTCTGTGTTAATGTCTCCAAACTGCACATTCGTAAGCTCAACCGTCAGACGTCCCCGAGATGAGCGCATCTTCCCCACAAC-AAGCTCCCTCAGTGGTCGTGTGGGCGGAGCCCCAACGTCCGAACGTCACACGGGGTT-----CTGTCACGGCCGTGCCCTAACTTTACACCCCATTATCGCGGAAGCTCCGTGTTCT-CCTACAAAGCCGAAATCTGC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 29330 252 - 218577 CTGAAGAACCTCCCCCAAACTCAAGACTTTAACTGTCATTTCTGTGTTAATGTCTCCAAATTGCACATTCCTAAGCTCAACCGTCAGACGTCCCCGAGATGAGCGCATCTTCCCCTCAAA-AAGCTCCCTCAGTGGTTGTGTGGGCGGAGCCCCAATGTCCGAACGTCACACGGGGTT-----CTGTCACGGCTGTGCCCTAACTTTACACCCCATTACCGCGGAAGCTCCGTGTTCT-CCTACAAAGCCGGAATCTGC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1407684 252 + 91010382 CTGAAGAACCTCCCCCCAACTCAAGACTTCAACTGTCATTTCTGTGTTAATGTCTCCAAATTGCACATTTGTAAGCTCAACCGTCAGACGTCTCCGAGATGAGCGCATCTTCCCCACAAC-AAGCTCCCTCAGTGGTCGTGTGGGCTGAGCCCCAATGTCCGAACGTCACACGAGGTT-----CTGTCACGGCTGTGCCCTAACTTTACACCCCATTATCGCGGAAGCTCCATGTTCT-CCTACAAAGCCGAAATCTGC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 66095 252 + 74206 CTGAAGAACCTCCCCCAAACTCAAGACTTCAACTGTCATTTCTGTGTTAATGTCTCCAAATTGCACATTCCTAAGCTCAACCGTCAGACGTCCCCGAGATGAGCGCATCTTCCCCTCAAA-AAGCTCCCTCAGTGGTTGTGTGGGCGGAGCCCCAATGTCCGAACGTCACACGGGGTT-----CTGTCACGGCTGTGCCCTAACTTTACACCCCATTACCGCGGAAGCTCCGTGTTCT-CCTACAAAGCCGGAATCTGC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 804533 252 - 1687011 CTGAAGAACCGCCCCCAAACTCAAGACTTCAACTGTCATTTCTGTGTTAATGTCTCCAAACTGCACATTCATAAGCTCAACCGTCAGACGTCCCCGAGATGAGCGCATCTTCCCCACAAC-AAGCTCCCTCAGTGGTCGTGTGGCCTAAGCCCCAATGTCCGAACGTCACACGCGGTT-----CTGTCACGGCTGTGCCCTGACTTTACATCCCGTCATCGCGGAAGCTCCATGTTCT-CCTACAAAGCCGAAAGCTGC i colAng1.NW_012116910v1 C 0 M 1021 s calJac3.chr2 204164810 250 + 204313951 CTGAAAAGCGTCCCCCAAACTCAAGACTGCAACTGTCATTTCTGTGTTAATGTCTCCAAACTGCACATTCGTAACCTCAACCATCAGACGTCCCCAAGGTGAGTTCATCTCCCCCAGGACGAAGCTCCTTCAGTGGTCACGTGGGCTGAG--CCAATGCCTAAATGTCACATG-GGTT-----CTGTCACAGCTGTGTCCTAACTTTGCACCCCACGATCACAGAAGCTCCATGTTCT-CCTACGAAGCTGAAATCCGC i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 16306679 240 + 16417988 CTGAAAAGCCTCCCCCAAATTTAAGACTTCAACTGTCATTTCTGTGTTAATGTCTCCAAATTGCACATTCGTAACTTCAACCATCAGACGTCCCCAAGGTGAGTTCATCTCCCCCTGGACGAAGCTCCCTCAGTGGTCGTGTGGGCTGAG--CCAACGCCCAAATGTCA---------------TGTCACAGCTG-GTCCTAACTTTGCACCCCACTATCACTGGAGCTCCATGTTCT-CCTATGAAGCTGAAGTCTGC i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 94504 250 - 306014 CTGAAAAGTCTCCCCCAAATTCAAGACTTCAACTGTCATTTCTGTGTTAATGTCTCCAAATTGCACATTCGTAACCTCAACCATCAGACATCCCCAAGGTGAGTTCATCTCCCCCAGGACGAAGCTCCCTCAGTGGTCGTGTGGGCTGAG--CCAATGCCCAAATGTCACATG-GGTC-----CTGTCACAGCTGTGTCCTAACTTTGCACCCCACTATCTCTGGAGCTCCATGTTCT-CCTATGAAGCTGAAGTCTGC i cebCap1.NW_016108150v1 I 1 C 0 s aotNan1.NW_018494784v1 137571 250 - 211231 CTGAAAAGCCTCCCCCAAACTCAAGACTTCAACTGTCATTTCTGTGTTAATGTCTCCAAATTGCACATTCATAACCTCAACCATCAGACGTCTCCGAGGTGAGTTCATCTCCCTCAGGATGAAGCTCCTTCAGTGGTCATGTGGGCTGAG--CCAGTGCCCAAATGTCACATG-GGTT-----CTGTCACAGCTGTGTCCTGACTTTGCACCCCACTATCACGGAAGCTCCATGTTCT-CCTAGGAAGCTGAAATCTGC i aotNan1.NW_018494784v1 I 1 C 0 s otoGar3.GL873745 2125229 220 - 2165740 CTAGAAAACATCCCCCCCAAAGGGGACTTCAATTGT---------GTCAATGTCATTGAATCCCACAACTGTG---TCAACTATCTGACAATCCCCTAAGTAGCTAGTCCCC---------AA-----------------ATGGGGAGGG-CCCAGTGTCCCTTCATGACGTGGAGTTCTGTCCTGTCACAGCTGTATGCTACCTTCACACCTCAGTCCTGTGTAAGCCTGATCTTCTCCCTCCCGGACTGAAGTCTGC i otoGar3.GL873745 I 1 C 0 s canFam3.chr34 11951976 217 + 42124431 CTGGATAA-------CAAAcc--agacctgcaccctcagcccagacct--cccttctgaaccccacatttgcacactcaactgtctGAGGAC-CCAAGAGGAGCTCAATCTGTCCATGACTGGGCAGTTACCAACATCTTGGGGGGGGGG--------------GGTCATGT-----------CTGCCACAGCT-CATCTCAGCTTTATACTCTACTACTGGGACAGCTTGATGTCCTCCCTACAGCG----ACTGTGC i canFam3.chr34 C 0 C 0 e mm10.chr13 74333979 246 + 120421639 I e dasNov3.JH577625 365248 2350 - 913073 I e macNem1.NW_012013899v1 69627 689 + 100774 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=523509.000000 s hg38.chr3_KI270934v1_alt 123565 123 + 163458 CTGTGCTGCTTCTTGGTTCCACGGCATTCA-CC-CAGCTCTCAGAATGCtcactcagtaaaccccgatggagaccctaccatgtgctgggcgtggagcacccca------gttaatgaga-agacctgcctg--- s gorGor5.CYUI01015759v1 16156 123 + 880730 CTGTGCTGCTTCTCGGTTCCACGGCATTCA-CC-CAGCTCTCAGAATGCtcactcagtaaaccccgatggagaccctaccatgtgctgggcatggagcacccca------gttaatgaga-agacctgcctg--- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179845801 123 - 180051392 CCGTGCTGCTTCTGGGTTCCACGGCATTCT-CC-CAGCTCTCAGAACGCtcactcagcaaaccctgacggagaccctgccacgtgctgggcatgggccacccca------gctaatgaga-agacctgcctg--- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1314842 123 + 181584905 CCGTGCTGCTTCTGGGTTCCACGGCATTCT-CC-CAGCTCTCAGAACGCtcactcagcaaaccctgatggagaccctgccacgtgctgggcatgggccacccca------gctaatgaga-agacctgcctg--- i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 29582 123 - 218577 CCGTGCTGCTTCTGGGTTCCACGGCATTCT-CC-CAGCTCTCAGAACGCtcactcagcaaaccctgatggagaccctgccacgtgctgggcatgggccacccca------gctaatgaga-agacctgcctg--- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1407936 123 + 91010382 CTGTGCTGCTTCTGGGTTCCACGGCATTCT-CC-CGGCTCTCAGAATGCTCCCtcagtaaaccctgatggagaccctgccacgcgctgggcgtgggccacccca------gcgaatgaga-agacctgcctg--- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 66347 123 + 74206 CCGTGCTGCTTCTGGGTTCCACGGCATTCT-CC-CAGCTCTCAGAACGCtcactcagcaaaccctgatggagaccctgccacgtgctgggcatgggccacccca------gctaatgaga-agacctgcctg--- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204165060 123 + 204313951 CTGTGCTGCTTCTTGGGTCCACGGCACCCT-CC-CAGCTCTCAGGGTGCtcactcaggaaaccctgatggaggccctgccatgtgctgggcttggagaaccccg------gtcaatgaga-agacctgcccg--- i calJac3.chr2 C 0 I 2 s saiBol1.JH378155 16306919 120 + 16417988 CTGTGCTG-TTCTCGGGTCCAC-GCATCCT-CC-CAGCTCTCAGGGTGCtcactcagg-aaccctgatggaggccctgccacgtgctgggctgggagaaccctg------gccaatgaga-agacctgcctg--- i saiBol1.JH378155 C 0 I 2 s cebCap1.NW_016108150v1 94754 122 - 306014 CTGTGCTGGTTCTCGGGTCCACGGCATCCT-CC-CAGCTCTCAGGGTGCtcactcagg-aaccctgatggaggccctgccacgtgctgggctgggagaaccctg------gccaatgaga-agacctgcctg--- i cebCap1.NW_016108150v1 C 0 I 2 s aotNan1.NW_018494784v1 137821 123 - 211231 CTGCGCTGCTTCTCGGGTCCATGGCATCCT-CC-CAGCTCTCAGGGTGCtcactcaggaaaccctgatagaggccctgccatatgctgggcttggagaacccca------gtcaatgaga-aggcctgcccg--- i aotNan1.NW_018494784v1 C 0 I 53 s otoGar3.GL873745 2125449 94 - 2165740 TTGTGGCACTGCTGG---TCA-GATATGCTACC-TAGCTCAGAGAATGCCCA--------------------------ccatgtgccgggc-------accacacatagtgccagtgagacagacctgcctc--- i otoGar3.GL873745 C 0 I 2 s canFam3.chr34 11952193 115 + 42124431 CCATGCCACATCTCG--TCAACAGCATCCC-CCACAGCTGTGAGGacattcactt-gtaaatactgccc-aggtcctactgtgcgtcaggcactgtgaa-caca------gc-------a-gtactggcccccac i canFam3.chr34 C 0 C 0 e mm10.chr13 74333979 246 + 120421639 I e dasNov3.JH577625 365248 2350 - 913073 I e macNem1.NW_012013899v1 69627 689 + 100774 I e colAng1.NW_012116910v1 804785 1021 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=59111.000000 s hg38.chr3_KI270934v1_alt 123688 13 + 163458 cccgagttgctga s gorGor5.CYUI01015759v1 16279 13 + 880730 cccgaggagctga i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179845924 13 - 180051392 cccgaggagctga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1314965 13 + 181584905 cccgaggagctga i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 29705 13 - 218577 cccgaggagctga i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1408059 13 + 91010382 cccgaggagctga i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 66470 13 + 74206 cccgaggagctga i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204165185 13 + 204313951 cccaagaagcaca i calJac3.chr2 I 2 C 0 s saiBol1.JH378155 16307041 13 + 16417988 cctgaggagcaga i saiBol1.JH378155 I 2 C 0 s cebCap1.NW_016108150v1 94878 13 - 306014 cccgaggagcaga i cebCap1.NW_016108150v1 I 2 C 0 s otoGar3.GL873745 2125545 13 - 2165740 cccaaggagctga i otoGar3.GL873745 I 2 C 0 s canFam3.chr34 11952308 13 + 42124431 ctctgggagcaga i canFam3.chr34 C 0 C 0 e mm10.chr13 74333979 246 + 120421639 I e aotNan1.NW_018494784v1 137944 53 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e macNem1.NW_012013899v1 69627 689 + 100774 I e colAng1.NW_012116910v1 804785 1021 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=142817.000000 s hg38.chr3_KI270934v1_alt 123701 42 + 163458 caacctcactgcaaa-gagggacactgaacaattcctgcttta s gorGor5.CYUI01015759v1 16292 42 + 880730 cgacctcactgcaaa-gagggacactgaacaatccctgcttta i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179845937 42 - 180051392 cgacctcgttgcgaa-gagggacactgaacaatccctgcttta i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1314978 42 + 181584905 cgacctcgttgcgaa-gagggacactgaacaatccctgcttta i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 29718 42 - 218577 cgacctcgttgcgaa-gagggacactgaacaatccctgcttta i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1408072 42 + 91010382 caacctcgttgtgaa-gagggacactgaacaatccctgcttaa i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 66483 42 + 74206 cgacctcgttgcgaa-gagggacactgaacaatccctgcttta i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204165198 39 + 204313951 tgaccttgttgcgaattagggacactgaacaatccctgc---- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16307054 38 + 16417988 tgaactcgttgcaaa-gaaggacactgaacaatccctgc---- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 94891 38 - 306014 cgaactcattgcgaa-gaaggacaccgaacaatccctgc---- i cebCap1.NW_016108150v1 C 0 C 0 s canFam3.chr34 11952321 42 + 42124431 ccactgagtcaggga-gaggaatactgaacagtcatggctcta i canFam3.chr34 C 0 I 21 e mm10.chr13 74333979 246 + 120421639 I e aotNan1.NW_018494784v1 137944 53 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e macNem1.NW_012013899v1 69627 689 + 100774 I e otoGar3.GL873745 2125558 0 - 2165740 C e colAng1.NW_012116910v1 804785 1021 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=-4597.000000 s hg38.chr3_KI270934v1_alt 123743 8 + 163458 cttttttt s gorGor5.CYUI01015759v1 16334 1 + 880730 c------- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179845979 1 - 180051392 c------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1315020 1 + 181584905 c------- i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 29760 4 - 218577 cttt---- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1408114 1 + 91010382 c------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 66525 8 + 74206 cttttttt i manLeu1.NW_012101728v1 C 0 C 0 e mm10.chr13 74333979 246 + 120421639 I e aotNan1.NW_018494784v1 137944 53 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e macNem1.NW_012013899v1 69627 689 + 100774 I e saiBol1.JH378155 16307092 0 + 16417988 C e calJac3.chr2 204165237 0 + 204313951 C e cebCap1.NW_016108150v1 94929 0 - 306014 C e canFam3.chr34 11952363 21 + 42124431 I e otoGar3.GL873745 2125558 0 - 2165740 C e colAng1.NW_012116910v1 804785 1021 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=1508187.000000 s hg38.chr3_KI270934v1_alt 123751 295 + 163458 tttttttttttt--gagacgaagtcttactctgttgcccaggctggagcgcagtggtgcgatctcggctcactgcaacctctgcctcccaggt----tcaagcattcctcccgcctcagcctcccaagtagctgggatcacaggtgcatgccaccatgcccagctgatttttttatgtttagtagagatgaggtttcaccatgttgtgcaggctggtcttgaactcctgacctcaggtgatccacctgccttggcctcccaaagtgctgggattacaggtgtgagccaccatgcccggcct s gorGor5.CYUI01015759v1 16335 295 + 880730 tttttttttttt--gagatgaagtcttactctgctgcccaggctggagcgcagtggtgcgatctcggctcactgcaacctctgcctcccaggt----tcaagcattcctcccgcctcagcctcccaagtagctgggatcacaggtgcatgccaccatgcccagctgatttttttatgtttagtagagatgaggtttcaccatgttgcgcaggctggtctcgaactcctgacctcaggtgatccacctgcctcggtctcccaaagtgctgggattacaggtgtaaaccaccacgcccggcct i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179845980 294 - 180051392 tttttttttttt--gagacggagtc-tactctgttgcccaggctggagtgcaggggtgcgacctcggctcactgcaacctctgcctcccaggt----tgaaacattcctcccgcctcagcctcccaagtagctgggattataggtacatgccaccacgccatgctgatttttgtattttcagtagacatgaggtttcaccatgttggtcgggctggtcttgaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattccaggcatgagccaccgtgcctggcct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1315021 295 + 181584905 tttttttttttt--gagacggagtcttactctgttgcccaggctggagtgcaggggtgcgacctgggctcactgcaacctctgcctcccaggt----tgaaacattcctcccacctcagcctcccaagtagctgggattataggtacatgccaccacgccatgctgatttttgtattttcagtagacatgaggtttcaccatgttggtcgggctggtcttgaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattccaggcatgagccaccgcgcctggcct i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 70316 294 + 100774 tttttttttttt--gagacggagtc-tactctgttgcccaggctggagtgcaggggtgcgacctcggctcactgcaacctctgcctcccaggt----tgaaacattcctcccacctcagcctcccaagtagctgggattacaggtacatgccaccacgccatgctgatttttgtattttcagtagacatgaggtttcaccatgttggtcgggctggtcttgaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattccaggcatgagccaccgcgcctggccT i macNem1.NW_012013899v1 I 689 C 0 s cerAty1.NW_012004452v1 29764 295 - 218577 tttttttttttt--gagacggagtcttactctgttgcccaggctggagtgcagggatgcgatctcggctcactgcaacctctgcctcccaggt----tgaaacattcctcccacctcagcctcccaagtagctggggttacaggtacatgccaccacgccatgctgatttttgtattttcagtagagatgaggtttcaccatgttggtcgggctggtcttgaactcctgacctcgggtgatccggccgccctggcctcccaaagtgctgggattacaggtgtgagccaccgcgcctggcct i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1408115 295 + 91010382 tttttttttttt--gagacagagtcttactctgttgcccaggctggagtgtaggggtgcgatctcggctcactgcaacctctgcctcccagat----tcaagtactcctcttgccttggcctcccaagtagctgggattacaggtacatgccaccacgccatgctgatttttgtattttcagtagagatgaggtttcaccatgttggctgggctggtcttgaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcctggcct i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 66533 295 + 74206 tttttttttttt--gagacggagtcttactctgttgcccaggctggagtgcagggatgcgatctcggctcactgcaacctctgcctcccaggt----tgaaacattcctcccacctcagcctcccaagtagctggggttacaggtacatgccaccacgccatgctgatttttgtattttcagtagagatgaggtttcaccatgttggtcgggctggtcttgaactcctgacctcgggtgatccggccgccctggcctcccaaagtgctgggattacaggtgtgagccaccgcgcctggcct i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204165237 299 + 204313951 ctttttttttacttgagatggagtcttactctgttgcccaggctggagggccgtggcacgatctgagctcactgcaacctctgc--ctcaggttcagtcaagcgttcctcctgcctcagtctcctgagtagctgggattacaggcacctgccaccatgcccacctaatttttgtatttttagtagagatgaggtttcaccatgttggccaggctggtctcgaacccctgacctcaggtgatccacctgcctcgacctcccaaagtgctgagatgacaggtgtgagtcactgtgcccggcct i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16307092 299 + 16417988 cttttttttcgc--aagacggagtcttactctgttgcccaggctggagggcagtggcgcaatctcagctcactgcaacctccgcctctcaggttcaatcaagcgttcctcccgccttagtctcctgagtagctgggattacaggcactcgccaccatgcctggctaatttttgtatttttagtagagatgaggtttcaccatgttggccaggctggtctcgaactcctgacctctggtgatccgcctgcctcggcttcccaaagtgctgagatgacaggtgtgagtcactgtgcccggcct i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 94929 299 - 306014 ctttttttcctc--aagacggagtcttactgtgttgcccaggctggagggcagtggcgcgatctcagctcactgccacctccgcctctcaggttcaatcaagcgttcctcccacctctgtcttccgagtagctgggattagaggcacccgccaccatgcccggctaatttttgtatttttcgtagaaatgaggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccgcctgcctcggccacccaaagtgctgagatgacaggtgtgagtcactgcgcccggcct i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 137997 299 - 211231 ctttttttactc--gagatggagtcttactccgttgcctaggctggagggccgtggcgcgatctcagctcactgcaacctccacctctcaggttcagtcaagtgttcctcccacctcagtctcctgagtagctgggattacaggcacctgccaccatgcccagataatttttgtatttttagtagagatgaggtttcaccatgttggccgggctggtctcgaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgctgagatgacaggtgtgagtcactgcgcccggccc i aotNan1.NW_018494784v1 I 53 C 0 e mm10.chr13 74333979 246 + 120421639 I e dasNov3.JH577625 365248 2350 - 913073 I e canFam3.chr34 11952363 21 + 42124431 I e otoGar3.GL873745 2125558 0 - 2165740 C e colAng1.NW_012116910v1 804785 1021 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=371758.000000 s hg38.chr3_KI270934v1_alt 124046 65 + 163458 caatccctgctttactgctggcataagtatcaccaaggcagggtttagggctcttgagaaatgca s gorGor5.CYUI01015759v1 16630 61 + 880730 caatccctgctttactgctggc----gtatcaccaaggcagggttcagggctcttgagaaatgca i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179846274 65 - 180051392 caatccctgctttactgctggcacaagtatgatcaaggcagggtttagggctcttcagaaatgca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1315316 65 + 181584905 caatccctgctttactgctggcacaagtatgatcaaggcagggtttagggctcttcagaaatgca i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 70610 65 + 100774 CAATCCCTGCTTTACTGCTGGCACAAGTATGATCAAGGCAGGGTTTAGGGCTCTTCAGAAATGCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 30059 65 - 218577 caatccctgctttactgctggcataagtatcaccaaggcagggtttagggctcttcagaaatgca i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1408410 65 + 91010382 caatccctgctttactgctggcacaagtatcaccaaggcagggtttagggctcttcagaaatgca i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 66828 65 + 74206 caatccctgctttactgctggcacaagtatcaccaaggcagggtttagggctcttcagaaatgca i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204165536 65 + 204313951 caatccccgctttactgctgggataagtatcaccaaggcagggtttagggttcttgaggaatgcg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16307391 65 + 16417988 caatccccgctctactgctgggataagtatcaccaaggcagggtttagggttcttaaggaatgcg i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 95228 65 - 306014 caatccccgctttactgccggggtaagtatcaccaaggcagggtttcgggttcttaaggaatgca i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 138296 65 - 211231 cagtcccctctctactgctgggataagcatcatcaaggcagggtttagggttcctgaggaatgtg i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2125558 65 - 2165740 caatcattgcttcacaactgggagaagtgctgccaaggcaatggtcagagttcttgaggaacaca i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74333979 246 + 120421639 I e dasNov3.JH577625 365248 2350 - 913073 I e canFam3.chr34 11952363 21 + 42124431 I e colAng1.NW_012116910v1 804785 1021 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=589897.000000 s hg38.chr3_KI270934v1_alt 124111 134 + 163458 taagatggtggcccaaactgccttaggggaaggggagtgtgggaaaagtctccttaaggaaatgacattgaagttaggacctgagagctatggaagctgatcTTCAA----AACCATGTTATTACATAAAACTATGGA s gorGor5.CYUI01015759v1 16691 134 + 880730 taagacggtggcccaaactgcctcaggggaaggggagtgtgggaaaagtctccttaaggaaatgacattgaagttaggacctgagagctaaggaagCTGATCTTCAA----AACCATGTTATTACATAAAACTATGGA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179846339 134 - 180051392 taaaacgctggcccaaactgccttaggggaaggagagtgtgggaaaagtctccttaaggaaacgacattgaagtgaggacctgagagctgaggaagCTGATCTTCAA----CACCATGTTATTACATAAAACCATGGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1315381 134 + 181584905 taaaacgctggcccaaactgccttaggggaaggagagtgtaggaaaagtctccttaaggaaacgacattgaagtgaggacctgagagctgaggaagCTGATCTTCAA----CACCATGTTATTACATAAAACCATGGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 70675 134 + 100774 TAAAACGCTGGCCCAAACTGCCTTAGGGGAAGGagagtgtgggaaaagtctccttaagtaaaggacattgaagtgaggacctgagagctgaggaagcTGATCTTCAA----CACCATGTTATTACATAAAACCATGGA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 30124 134 - 218577 taaaacgctggcccaaactgccttaggggaagggaagtctgggaaaagtctccttaaggaaacgacattgaagtgaggacctgagagctgagaaagCTGATCTTCAA----CACCACGTTACCACATAAAACCATGGA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1408475 134 + 91010382 taaaacgctggcccaaactgccttaggggaagggaagtgtgggaaaagtctccttaaggaaacgacattgaagttaggacctgagagctgagaaagCTGATCTTCAA----AACCACGTTACCACATAAACCTATGGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 66893 134 + 74206 taaaacgctggcccaaactgccttaggggaagggaagtgtgggaaaagtctccttaaggaaacgacattgaagtgaggacctgagagctgagaaagCTGATCTTCAA----CACCACGTTACCACATAAAACCATGGA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204165601 104 + 204313951 taagacggtggcccaaactaccttaggg------aggtgtgggcaaagtctccttaaggaaatgacatttaagtcaggacctgagagccgagaaag----------------------------catagaactatgGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16307456 104 + 16417988 taagatggtggcccaaactaccttagcg------aggtgtgggcacagtctccctaaggaaatgacatttaagtcaggacctgagagctgagaaag----------------------------cagagaactatgGC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 95293 103 - 306014 caagacagtggtccaaactaccttaggg------aggtgt-ggcacagtctccttaaggaaatgacatttaagtcaggatctgagagctgagaaag----------------------------catagaactatgGC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 138361 104 - 211231 taagacggtggcccaaattaccttaggg------aggtgtgggcaaagtctccttaaggaaatgacatttaagtcagcacctgagagctgagaaag----------------------------cATAGAACTGTGGC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2125623 121 - 2165740 caagatag-gacctaaactgccttaggg------aaatcaggagaaaatct---tgaggaaatgacatttagattaggacctgaGA--CACAAAAG-----TTCCAATGATAAGTATGTTAGTACATGAAACTGTAGG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11952384 100 + 42124431 taagatg-tgccctaagctgctttgggg------gagacagggaaagatctccttgagcaaatgac----aaggtgggctctgagaac---------------------------atgtcagtgtatggaattgccga i canFam3.chr34 I 21 C 0 e mm10.chr13 74333979 246 + 120421639 I e dasNov3.JH577625 365248 2350 - 913073 I e colAng1.NW_012116910v1 804785 1021 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=294092.000000 s hg38.chr3_KI270934v1_alt 124245 67 + 163458 AGAGCAATGAGTAGGCACC--------ACA-----CGCTTACAAGACACAC--GAGCCGAACGCCTTCCGGGCAAGGCGTCC s gorGor5.CYUI01015759v1 16825 67 + 880730 AGAGCAATGAGTAGGCACC--------ACA-----CACTTACAAGACACAC--GAGCCAAACGCCTTCCAGGCAAGGCGTCC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179846473 69 - 180051392 GGAGCAATGAGTAGGCACC--------ACA-----CGCTTACAAGACACACATGAGCTGAACACCTGCCGGGCAAGGTGTCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1315515 69 + 181584905 GGAGCAATGAGTAGGCACC--------ACA-----CGCTTATAAGACACACATGAGCTGAACACCTGCCGGGCAAGGTGTCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 70809 69 + 100774 GGAGCAATGAGTAGGCACC--------ACA-----CGCTTACAAGACACACATGAGCTGAACACCTGCCGGGCAAGGTGTCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 30258 69 - 218577 GGAGCAATGAGTAGGCACC--------ACA-----CGCTTACAAGACACACATGAGCTGAACGCCTGCCAGGCAAGGCGTCC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1408609 82 + 91010382 GGAGCGATGAGTAGTTGCCTACAACTTACAAGTAGAGCTTACAAGACACACATGAGCTGAACGCCTGCCAGGCAAGGTGTCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 67027 69 + 74206 GGAGCAATGAGTAGGCACC--------ACA-----CGCTTACAAGACACACATGAGCTGAACGCCTGCCAGGCAAGGCGTCC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204165705 59 + 204313951 AGAGCAATGAGTAGGCACC--------ACA-----CGCTTATGAGACACACATGAGCCCGATGCCTG-CA---------CTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16307560 66 + 16417988 AGAGCAATGAGTAGGCACC--------ACA-----TGCTCACGAGACACAC--GAGGCCGGTGCCTG-CAGGGAAGGCGCCG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 95396 68 - 306014 AGAGCAATGAGTAGGCACC--------ACA-----TGCTTACGAGACACACACGAGGCCGATGCCTG-CAGGCGAGGTGCCA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 138465 68 - 211231 AGAGCAATGAGTAGGCACC--------ACA-----CGCTTACGAGACACACATGAGCCCGATGCCTG-CGCGCAAGGCACCA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2125744 55 - 2165740 GGACC--------GGTACT--------GCC-----TGTTTACAAGACACA-ACGAGCCCA----CTGCCAGGCGAGGGTCC- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74334225 64 + 120421639 AAAGCAAGGAATAGGTACT--------GCA-----TGCTTGAAATACACAGAAGAGCCCAGAGCCAGACAGGTATTC----- i mm10.chr13 I 246 C 0 s canFam3.chr34 11952484 64 + 42124431 ggagcattgag-agctgtg--------gag-----ggCTTAAAAGACATGAAAATCCCTGACCCCATGAAGGCAATCC---- i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 365248 2350 - 913073 I e colAng1.NW_012116910v1 804785 1021 - 1687011 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=1787827.000000 s hg38.chr3_KI270934v1_alt 124312 202 + 163458 TGCCCTACCTGTGGGGTGGAACTGAACAAACTCGAGGTCCTGGCAAGGAAGGCCTGCCCTGGTGATCATGGCCGTGCCGTCGCTGGTGCTGGTGTGGGCAGACGTGCAGCTCAAGTAGGTGCGCCCGTAGCCTATGGAAA----------CA-------ACAGAGAGCAGTGACTGCACACAGTGGCCCACGTCCGGACCTCCTGTCTAATGAGATCAC s gorGor5.CYUI01015759v1 16892 202 + 880730 TGCCCTACCTGTGGGGTGGAACTGAACAAACTCGAGGTCCTGGCAAGGAAGGCCTGCCCTGGTGATCATGGCCGTGCCGTCGCCGCTGCTGGTGTGGGCAGACGTGCAGCTCAAGTAGGTGCGCCCGTAGCCTATGGAAA----------CA-------ACAGAGAGCAGTGACTGCACACAGCGGCCCACGTCCGGACCTCCAGTCTAGTGAGATCAC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179846542 202 - 180051392 TGCCCTACCTGTGGGGTGGAACTGAACGAACTCTAGGTCCTGGCAAGGAAGGCCTGCCCTGGTGATCATGGCCGTGCCGTCGCCGGTGCTGGTGTGGGCAGACGTGCAGCTGAAGTAGGTGCGCCCGTAGCCTCTGGAAA----------CA-------ACAGACAGCAGTGACTGCACACAGCGGCCCACGTCCGGACCTCCTGTCTGGTGAGATCAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1315584 202 + 181584905 TGCCCTACCTGTGGGGTGGAACTGAACGAACTCTAGGTCCTGGCAAGGAAGGCCTGCCCTGGTGATCATGGCCGTGCCGTCGCCGGTGCTGGTGTGGGCAGACGTGCAGCTGAAGTAGGTGCGCCCGTAGCCTCTGGAAA----------CA-------ACAGACAGCAGTGACTGCACACAGCGGCCCACGTCCGGACCTCCTGTCTGGTGAGATCAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 70878 202 + 100774 TGCCCTACCTGTGGGGTGGAACTGAACGAACTCTAGGTCCTGGCAAGGAAGGCCTGCCCTGGTGATCATGGCTGTGCCGTCGCCGGTGCTGGTGTGGGCAGACGTGCAGCTGAAGTAGGTGCGCCCGTAGCCTCTGGAAA----------CA-------ACAGACAGCAGTGACTGCACACAGCGGCCCACGTCCGGACCTCCTGTCTGGTGAGATCAC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 30327 202 - 218577 TGCCCTACCTGTGGGGTGGAACTGAACGAACTCTAGGTCCTGGCAAGGAAGGCCTGCCCTGGTGATCATGGCCGTGCCGTCGCCGGTGCTGGTGTGGGCAGACGTGCAGCTGAAGTAGGTGCGCCCGTAGCCTCTGGAAA----------CA-------ACAGACAGCAGTGACTGCACACAGCGGCCCACGTCCGGACCTCCTGTCTGGTGAGATCAC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1408691 191 + 91010382 TGCCCCACCTGTGGGGTGGAACTGAACAAACTCTAGGTCCTGGCAAGGAAGGTCTGCCCTGGTGATCATGGCCATGCTGTCACCGGTGCTGGTGTGGGCA-----------GAAGTAGGTGCACCCGTAACCTCTGGAAA----------CA-------ACAGACAGCAGTGACTGCACACAGCGGCCCACGTCCGGACCTCTTGTTTGGTGAGATCAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 67096 202 + 74206 TGCCCTACCTGTGGGGTGGAACTGAACGAACTCTAGGTCCTGGCAAGGAAGGCCTGCCCTGGTGATCATGGCCGTGCCGTCGCCGGTGCTGGTGTGGGCAGACGTGCAGCTGAAGTAGGTGCGCCCGTAGCCTCTGGAAA----------CA-------ACAGACAGCAGTGACTGCACACAGCGGCCCACGTCCAGACCTCCTGTCTGGTGAGATCAC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 805806 188 - 1687011 TGCCCTACCTGTGGGGTGGAACTGAACAAACTCTAGGTCCTGGCAAGGAAGGCCTGCCCTGGTGATCATGGCTGTGCTGTCACCGGTGCTGGTGTGGGCA-----------GAAGTAGGTGCACCCGTAACCTCTGGAAA----------AA-------ACAGACAGCAGTGACTG---ACAGCGGCCCACGTCCGGACCTCCTGTCTGGTGAGATCAC i colAng1.NW_012116910v1 M 1021 C 0 s calJac3.chr2 204165764 200 + 204313951 TGCCCTACCTGTGGGGTGGAACTGGACAAACTCGAGGTCCTGGCAAGGAAGGCCTGCCCTGGTGACCATGGCTGTGCCATCACCGGTGCTGGTGTGGGCAGACGTGCAGCTGAAGTAGGTGCGCCCGTAGCCTCTGGAAA----------CA---------AGAGAGCAGTGACTGCACACAGCAGCCCACATCCAGACCTCCTGTCTGATGAGACTGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16307626 200 + 16417988 TGCCCTACCTGTGGGGTGGAACTGGACGAACTCCAGGTCTTGGCAAGGAAGGCCTGCCCTGGTGACCATGGCCGTGCCATCACCGGTGCTGGTGTGGGCGGACGTGCAGCTGAAGTAGGTGCGCCCGTAGCCTCTGGAAA----------CA---------AGAGAGCAGTGACTGCGCACAGCGGCCCACGTCCAGACCTCCTGTCTGATGAGAGCGC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 95464 200 - 306014 TGCCCTACCTGTGGGGTGGAACTGGACAAACTCGAGGTCCTGGCAAGGAAGGCCTGCCCTGGTGACCATGGCCGTGCCATCACCGGTGCTGGTGTGGGCGGACGTGCAGCTGAAGTAGGTGCGCCCGTAGCCTCTGGAAA----------CA---------AGAGAGCGGTGACTGCACACAGCAGCCCACGTCCAGACCTCCTGTCTGATGAGACCGC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 138533 200 - 211231 TGCCCTACCTGTGGGGTGGAACTGGACAAACTCGAGGTCCTGGCAAGGAAGGCCTGCCCTGGTGACCATGGCTGTGCCATCACCGGTGCTGGTGTGGGCAGATGTGCAGCTGAAGTAGGTGCGCCCATAGCCTCTGGAAA----------CA---------AGAGAGCAGTGACTGCACACAGCAGCCCACATCCAGACCTCCTGTCTGATGAGACTGC i aotNan1.NW_018494784v1 C 0 I 24 s otoGar3.GL873745 2125799 197 - 2165740 TTTCCTACCTGTGGGGTGGAACTGAACGAACTCTAAGTCCTGGCAGGGAAGGCTTGCCCTGGTGATCATGGCTGTGCCATCACCGGTGCTGGTATGGGCAGATGTGCAGCTGAAGTAGGTACGTCCATAGCCTCTGGAAA----------TAGAAAATAACAAAGAACAATGATT--ACACAGTGGCCCATGTCAGGACCTCCTG----ATGA------ i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74334289 191 + 120421639 TGTCCTACCTGTGGGGTGGAACTGAACAAATTCTAAGTCCTGGCAAGGCAAACCAGCCCTAGTGACCATGGCTGTGCCGTCCCCTGTGCTGGTATGGGCAGATGTACAGCTGAAGTAGGTTCGCCCGTAGCCCCTGAAAG----------CA----------GAAAACAGTGACTATAAGCATCAGTCCACA-CCAAACTTCCTCTTATATG------- i mm10.chr13 C 0 C 0 s canFam3.chr34 11952548 208 + 42124431 CATCCTACCTGTGGGGTGGAACTGAACGAACTCCAAGTCCTGGCAGGGAAGGCCTGCCCTGGTGACCATGGCGGTGCCGTCACCGGTGCTGGTGTGGGCAGATGTGCAGCTGAAGTAGGTGCGCCCATAACCTCTGGAAAACAGACATGCCA-------GCATGGAGAGAACATGACACACAGTGAACCA--TCAGGTCTGCCTTTCTAATGGCACC-- i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 365248 2350 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=130674.000000 s hg38.chr3_KI270934v1_alt 124514 24 + 163458 AGAACGGACAGGGCAGCCCCCGGG s gorGor5.CYUI01015759v1 17094 24 + 880730 AGAATGGACAGGGCAGCCCCCGGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179846744 24 - 180051392 AGAATGGACACAGCAGCCCCCGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1315786 24 + 181584905 AGAATGGACACAGCAGCCCCCGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 71080 24 + 100774 AGAATGGACACAGCAGCCCCCGGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 30529 24 - 218577 AGAATGGACACAGCAGCCCCCGGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1408882 24 + 91010382 AGAATGGACACAGCAGCCCCCGGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 67298 24 + 74206 AGAATGGACACAGCAGCCCCCGGG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 805994 24 - 1687011 AGAACGGACACAGCAGCCCCCGGG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204165964 23 + 204313951 -GAATGGACATGGAGACACCCGGG i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 16307826 23 + 16417988 -GAATGGACGTGGAGACACCCGGG i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 95664 23 - 306014 -GAATGGACACGGAGACACCCGGG i cebCap1.NW_016108150v1 C 0 I 1 s otoGar3.GL873745 2125996 16 - 2165740 -----GGCCAGAGCAGCCCCT--- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74334480 14 + 120421639 ----------GTGCAGTCTCTGGG i mm10.chr13 C 0 I 1 s canFam3.chr34 11952756 24 + 42124431 AGAGTGGACAGAGCAGCCCAGAAG i canFam3.chr34 C 0 C 0 e aotNan1.NW_018494784v1 138733 24 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=723810.000000 s hg38.chr3_KI270934v1_alt 124538 140 + 163458 CACCATCTTCTCAG-TGC----TGT-----GTGCACACAACCCCCTACTCACGCACACCCCACACACATCAC--TGGGGGCCACGCCAGTGGTGCTGCTACCCTGCGCAGGTAGGATAG--AAGCCTG-GGATCAGAGAAGAGACTTCCATTTAT s gorGor5.CYUI01015759v1 17118 140 + 880730 CACCAACTTCTCAG-TGC----TGT-----GTGcacacaaccccctactcacacacaccccacacacatcac--TGGGGGCCACGCCAGTGGTGCTGCTACCCTGCGCAGGTAGGATAG--AAGCCTG-GGATCAGAGAAGGGACTTCCAtttgt i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179846768 133 - 180051392 CACCGTCTTCTCA-----------------GTGCACACAACCCCCTACTCACGCACACCCCACACACATCAC--TGGGGGCCACACCAGTGGAGCTGCTACCCTATGCATGTAGGATAG--AAGCCTG-GGATCAGAGAAGGGACTTCCAtttgt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1315810 133 + 181584905 CACCGTCTTCTCA-----------------GTGCACACAACCCCCTACTCACGCACACCCCACACACATCAC--TGGGGGCCACACCAGTGGAGCTGCTACCCTATGCATGTAGGATAG--AAGCCTG-GGATCAGAGAAGGGACTTCCAtttgt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 71104 133 + 100774 CACCGTCTTCTCA-----------------GTGCACACAACCCCCTACTCACGCACACCCCACACACATCAC--TGGGGGCCACACCAGTGGAGCTGCTACCCTATGCATGTAGGATAG--AAGCCTG-GGATCAGAGAAGGGACTTCCAtttgt i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 30553 144 - 218577 CATCATCTTCTCAG-TGC----TGTCTGT-GTGCACACAACCCCCTACTCACGCACACCCCACACACATCAC--TGGGGGCCACACCAGTGGGGCTGCTACTCTGTGCGGGCAGGACAG--AAGCCTG-GGATCAGGGAAGGGACTTCCAtttgt i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1408906 144 + 91010382 CACCATCTTCTCAG-TGC----TGTCTGT-GTGCACACAACCCTCTACTCATACACACCCCACACACATCAC--TGGGGGCCATACCAGTGGAGCTGCTACCCTATGCAGGTAGGATAG--AAGCCTG-GGATCAGAGAACGGACTTCCAtttgt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 67322 144 + 74206 CATCATCTTCTCAG-TGC----TGTCTGT-GTGCACACAACCCCCTACTCACGCACACCCCACACACATCAC--TGGGGGCCACACCAGTGGGGCTGCTACTCTGTGCGGGTAGGACAG--AAGCCTG-GGATCAGGGAAGGGACTTCCAtttgt i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 806018 144 - 1687011 CACCGTCTTCTCAG-TGC----TGCCTGT-GTGCACACAACCCTCTACTCACGCTCACCCCACACACATCAC--TGGGGGCCATGCCAGAGGAGCTGCTACCCTATGCAGGTAGGATAG--AAGCCTG-GGATCAGAGAAGGGACTTCCAtttgt i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204165988 134 + 204313951 CACCACCTTCTCAG-TGC----TGTCTGT-GTGCACACAACCC-CTCCTCAGGTA---CCCCCACACATCAC--TGGGGGCCACGCCTGTGGTGCTGCTACCCTGC----GTACGATAG--AAGCC---AGGTCAGAGAAGGGACTTCCATCTGT i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 16307850 136 + 16417988 CACCAACTTCTCAG-TGC----TGTCTGT-GTGCACACAACCC-CTCCTCAGGCA--CCCCCCACACATCAC--TAGGGGTCATGCCTATGGTGCTGCTACTCTGC----ATAGGATAG--AAGCCT--GGGTCAGAAAAAGGACTTCCCtttgt i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 95688 136 - 306014 CACCACCTTCTCAG-TGC----TGTCTGT-GTGCACACAACCC-CTCCTCAGGCA--CCCCACACACATCAC--TGGGGGTCACGCCTGTGGTGCTGCTACTCTAC----ATAGGACGG--AAGCCT--GCGTCAGACAAAGGACTTCCAtttgt i cebCap1.NW_016108150v1 I 1 C 0 s aotNan1.NW_018494784v1 138757 135 - 211231 CACCACCTTCTCAG-TGC----TGTCTGT-GTGTACACAACCC-CTCCTCAGGCG--CCCCAAACACATCAC--TGGGGGCCACGCCTGTGGTGCTGCTACCCTGC----GCAGGACAG--AAGCC---AGGTCAGAGAAGGGACTTCCAtttgt i aotNan1.NW_018494784v1 I 24 C 0 s otoGar3.GL873745 2126012 111 - 2165740 ----------------GT----AGTTTGT-GCATACAC------CTTCACCCCCACAGTGTGCATACACTA-------------AGCAGAGAGGCTGCTATCCCAGGCAAGTGGGACAGGCAAGTGGG-GGAT---AGAAGGGATTCTCACTTGT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74334495 140 + 120421639 CACCAACCTCTAAT-GACCCCTTGCTTGTAATGTTCTCTGCCCCATGCATGTATATACACGACACACAATACGTGGGAGGCCATACTTGTGATGTTCTTAAC--------ATAAGATGG--AGGCTAG-GAGACAGAGAAGGGGAATA---TTGT i mm10.chr13 I 1 I 9 s canFam3.chr34 11952780 82 + 42124431 ---CACTCTGACAGCTGC----TGTCT---GTATACACTACCC-------------------------------TGGGCA------------------------------GCTGGGTGG--GAGCCTGAGGGACAGAGAAGGCACTTTCATTGGT i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 365248 2350 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=20395.000000 s hg38.chr3_KI270934v1_alt 124678 6 + 163458 Atttta-- s gorGor5.CYUI01015759v1 17258 4 + 880730 attt---- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179846901 4 - 180051392 attt---- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1315943 4 + 181584905 attt---- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 71237 4 + 100774 attt---- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 30697 3 - 218577 -ttt---- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1409050 4 + 91010382 attt---- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 67466 3 + 74206 -ttt---- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 806162 4 - 1687011 attt---- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204166122 4 + 204313951 Attt---- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16307986 4 + 16417988 attt---- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 95824 4 - 306014 attt---- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 138892 4 - 211231 attt---- i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74334644 4 + 120421639 ATTT---- i mm10.chr13 I 9 I 2036 s canFam3.chr34 11952862 6 + 42124431 ACTT--TA i canFam3.chr34 C 0 I 9 e dasNov3.JH577625 365248 2350 - 913073 I e otoGar3.GL873745 2126123 0 - 2165740 C e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=1475848.000000 s hg38.chr3_KI270934v1_alt 124684 252 + 163458 tttatttatttatttattttgagatagggtctaactcttgtcgcccaggctggagtacggtggcacaatctcggctcacggcaacctctggctcccaagttcaagtgattcttctgcctcagcctcccaagtacctgggaatacaggtgtgcaccaccacatccaattgatttttgtattttta-gtagagactgggtttcgccacgttggccacgctggtcttgaactcctgacctcaggtgatccacccac s gorGor5.CYUI01015759v1 17262 251 + 880730 ttattttatttatttattttgagacagggtctaactcttgttgcccaggctggagtacggtgg-acaatctcggctcatggcaacctccggctcccaagttcaagtgattcttccgcctcagcctcctgagtacctgggattacaggtgtgcaccaccacacccaattaatttttgtattttta-gtagagactgggtttcgccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccac i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179846905 245 - 180051392 ------tatttatttattctgagatagagtctaattc-tgtcaccccggctggagtacagtggcacgatctcggctcacagcaacctccagctcccaggttcaagtgacttttccgcctcagcctcccgggtagctgggattacaggtgtgcaccaccacgtccatttaatttttgtattttta-gtagggatggggtttcgccatgttggcccagctggtctcgaactcctgacctcaagtgatcctcccac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1315947 245 + 181584905 ------tatttatttattctgagatagagtctaactc-tgtcacccaggctggagtacagtggcacgatctcggctcacagcaacctccagctcccaggttcaagtgacttttccgcctcagcctcccgggtagctgggattacaggtgtgcaccaccatgcccagttaatttttgtattttta-gtagggatggggtttcgccatgttggcccggctggtctcgaactcctgacctcaagtgatcctcccac i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 71241 245 + 100774 ------tatttatttattctgagatagagtctaactc-tgtcacccaggctggagtacagtggcacgatctcggctcacagcaacctccagctcccaggttcaagtgacttttccgcctcagcctcccgggtagctgggattacaggtgtgcaccaccacgtccatttaatttttgtattttta-gtagggatggggtttcgccatgttggcccggctggtctcgaactcctgacctcaagtgatcctcccac i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 30700 245 - 218577 ------tattgatttattttgagacagggtctaactc-tgtcgcccaggctggagcacagtggcacgatctcggctcacagcaacctccggctcccaggttcaagtgacttttccgcctcagcctcccgggtagctgggattacaggtgtgcaccaccatgcccagttaatttttgtattttta-gtagagatggggttttgccatgttggtccggctgctctcgaactcctgacctcaagtgatcctcccac i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1409054 245 + 91010382 ------tatttatttattttgagatagagtctaactc-tgtcgcccaggctggagtacagtggcacgatctcggctcacagcaacttccggctcccaggttcaagtgacttttccgcctcagcctctcgggtagctgggattacaggtgtgcaccaccatgctcagttaatttttgtattttta-gtagagattgggtttcgccatgttggccaggctggtcttgaactcctgacctcaggtgatcctcccac i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 67469 245 + 74206 ------tattgatttattttgagacagggtctaactc-tgtcgcccaggctggagcacagtggcacgatctcggctcacagcaacctccggctcccaggttcaagtgacttttccgcctcagcctcccgggtagctgggattacaggtgtgcaccaccatgcccagttaatttttgtattttta-gtagagatggggttttgccatgttggtccggctgctctcgaactcctgacctcaagtgatcctcccac i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 806166 245 - 1687011 ------tatttatttattttgagacaaggtctaactc-tgtcgcccaggctggagtacggtggcacgatctcagctcatggcaacctccggctcccaagttcaagtgacccttccgcctcagcctcctgggtagctgggattacaggtgtgcaccaccatgcccagttaatttttgtattttta-gtagagattgggtttcgccatgtcggccaggctggtcttgaactcctgacctcaggtgatcctcccac i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204166126 250 + 204313951 -tattttatttatttattttgagatagggtcttgctc-tgtcgcccaggctggagtgcagtgacgcaatctcggctcactgcaacctccacctcccaggttcaagcgattctcccgcctcagcctcctgagtagctggaattacaggtatttaccaccacacccagttaatttttgtctttttt-gtagaaatggggttttgtcaagttggccaggctggtctcaaactcctgacctcaagtgatcttcccac i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16307990 251 + 16417988 -tactttatttatttattttgagataggctcttgctc-tgttgcccaggctggagtgcagtgacgcattcttggctccctgcaacctccacctcctaggttcaagcaattcttccgcctcagcctcctgagtagctggaattacaggtgtgcaccaccacacacaattaatttttgtattttttagtagaaatggggttttgccatgttggccacgctggtctcaaactcctgacctcaagtgatcctcccac i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 95828 248 - 306014 -tattttatttatttattttgagataggctcttg--c-tgtcgcccaggctggagtgcaatgacgcaatcttggctcactgcaacctccacctcccaggtttaagcgattctcccgcctcagcctcctgagtagctggaattacaggtgtgcaccaccacacacagttaatttttgtattttta-gtggaaatggggttatgccacgttggccatgctggtctcaaactcctgacctcaagtgatcctcccac i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 138896 250 - 211231 -tattttgtttatttattctgagaaaggctcttgctc-tgtcgcccaggctggagtgcagtgacgcaatctcggctcactgaaacctccacctcccaggttcaagcaattctcccgtctcagcctcctgagtagctggaattacaggtgtgcaccaccgcactcagttaatttttgtatttttc-gtagaaatggggttttgccaagttggccaggctggtctcaaactcctgacctcaagtgatcctcccac i aotNan1.NW_018494784v1 C 0 I 368 e mm10.chr13 74334648 2036 + 120421639 I e dasNov3.JH577625 365248 2350 - 913073 I e canFam3.chr34 11952868 9 + 42124431 I e otoGar3.GL873745 2126123 0 - 2165740 C e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=360387.000000 s hg38.chr3_KI270934v1_alt 124936 68 + 163458 ttcggcctcccaaagtgctgggattacaggcatgagccactatgcgtctggccCTATTTGTATTTTAG s gorGor5.CYUI01015759v1 17513 68 + 880730 ttcggcctcccaaagtgctgggattacaggcatgagccactatgcgtctggccCTATTTGTATTTTAG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179847150 68 - 180051392 ttcggcctcccaaagtgctgggattacaggcatgagccactgcatgtctggccCTGTTTGTATTTTAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1316192 68 + 181584905 ttcggccttccaaagtgctgggattacaggcatgagccactgcacgtctggccCTGTTTGTATTTTAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 71486 68 + 100774 ttcggcctcccaaagtgctgggattacaggcatgagccactgcacgtctggccCTGTTTGTATTTTAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 30945 68 - 218577 ttcggcctcccaaagtgctgggattacaggcatgagccactgcacacctggccCTGTTTGTATTTTAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1409299 68 + 91010382 ttcggcctcccaaagtgctgggattacaggcatgagccactgcgtgcctggccCTATTTGTATTTTAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 67714 68 + 74206 ttcggcctcccaaagtgctgggattacaggcatgagccactgcacacctggccCTGTTTGTATTTTAG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 806411 67 - 1687011 tttggcctcccaaagtgctgggattacaggcatgagccactgcgtgcctggccCTATCTGTA-TTTAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204166376 68 + 204313951 tttggccttccaaagagctgggattacaggcacgaggcaccatgcACCTGACCCTATTTGTATTTTAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16308241 68 + 16417988 ttctgcctcccaaagagctgggattacaggcatgaggcaccatgcacctggccCTATTTGTATTTTAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 96076 68 - 306014 tttggcctcccaaacagctaggattacaggcatgaggcaccatgcacctggccCTATTTGTATTTTAG i cebCap1.NW_016108150v1 C 0 C 0 e mm10.chr13 74334648 2036 + 120421639 I e aotNan1.NW_018494784v1 139146 368 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e canFam3.chr34 11952868 9 + 42124431 I e otoGar3.GL873745 2126123 0 - 2165740 C e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=106755.000000 s hg38.chr3_KI270934v1_alt 125004 17 + 163458 ATTTGTGCTGTTCAAAA s gorGor5.CYUI01015759v1 17581 17 + 880730 ATTTGTGCTGTTCAAAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179847218 17 - 180051392 CTTTGTGCTGTTCAAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1316260 17 + 181584905 CTTTGTGCTGTTCAAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 71554 17 + 100774 CTTTGTGCTGTTCAAAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 31013 17 - 218577 CTTTGTGCTGTTCAAAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1409367 17 + 91010382 CTTTGTGCTGTTCAAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 67782 17 + 74206 CTTTGTGCTGTTCAAAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 806478 17 - 1687011 CTTTGTGCTGTTCAAAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204166444 17 + 204313951 CTTTGTGCTGTTCAAAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16308309 17 + 16417988 CTTTGTGCTATTCAAAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 96144 17 - 306014 CTCTGTGCTGTTCAAAA i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2126123 17 - 2165740 ATTTGTGTTGTTTGATG i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74334648 2036 + 120421639 I e aotNan1.NW_018494784v1 139146 368 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e canFam3.chr34 11952868 9 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=391750.000000 s hg38.chr3_KI270934v1_alt 125021 59 + 163458 GGTTTCCCCAGTAAGCATATACTACTTTTATAATGAAAATTTTAAAATTTTTATGGATT s gorGor5.CYUI01015759v1 17598 59 + 880730 CGTTTCCCCAATAAGCATATACTACTTTTATAATGAAAATTTTAAAATTTTTATGGATT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179847235 59 - 180051392 GATTTCCCCAATAAGCATATACTACTTTTATAATGAAAATTTTAAAATTTTTATGGATT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1316277 59 + 181584905 GATTTCCCCAATAAGCATATACTACTTTTATAATGAAAATTTTAAAATTTTTATGGATT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 71571 59 + 100774 GATTTCCCCAATAAGCATATACTACTTTTATAATGAAAATTTTAAAATTTTTATGGATT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 31030 59 - 218577 GATTTCCCCAATAAGCATATACTACTTTTATAACGAAAATTTTAAAATTTTTATGGATT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1409384 59 + 91010382 GATTTCCCCAATAAGCATATGCTACTTTTATAATGAAAATTTTAAAATTTTTATGGATT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 67799 59 + 74206 GATTTCCCCAATAAGCATATACTACTTTTATAACGAAAATTTTAAAATTTTTATGGATT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 806495 59 - 1687011 GATTTCCCCAATAAGCATATACTACTTTTATAATGACAATATTAAAATTTTTATGGATT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204166461 59 + 204313951 GGTTTCCCCAATAAGCATATACCACttttataatgaaaatttttaaatttttatGGATT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16308326 59 + 16417988 TGTTTCCCTAATAATCATATACCACTTTTATAATGAAAATTTTAAAATTTTTGTGGATT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 96161 59 - 306014 GGTTTCCCCAATAAGCATATACCACTTTTATAATGAAAATTTTAAAATTTTTATGGATT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2126140 58 - 2165740 AGTTTTCCTGGTATGCATATATTAC-TCTATAATAAAATGTTTTTAAATTTTATGGGTT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11952877 57 + 42124431 GACTTCCCTGATAAGCACGTGCTACTTTAATACAGAAGGCTGT--AATGTTTATGGATT i canFam3.chr34 I 9 I 4 e mm10.chr13 74334648 2036 + 120421639 I e aotNan1.NW_018494784v1 139146 368 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=561464.000000 s hg38.chr3_KI270934v1_alt 125080 131 + 163458 -----------TTG-TTtttttcccccagatttactgaggtatgattgatgaatt---aaac-aaaaaacaatactgtatatatttaaggtgtacagcgtgatgatt------tattttgtgaactgatgac-acaatcaacttaat-----------acacatc s gorGor5.CYUI01015759v1 17657 132 + 880730 -----------TTG-GTtttttcacccagatttactgaggtatgattgatgaatt---aaacaaaaaaacaaaactgtatatatttaaggtgtacaacgtgatgatt------tattttgtgaactgatgac-acaatcaacttaat-----------acacatc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179847294 136 - 180051392 -----------TTG-TTtttttccccccaatttactgaagtatgattgatgaatt---aaaaaaaaaaa-aaaaccgtatatatttaaggtgtacaatgtgatgatttga-tatattttgtgaactgatgac-acaaccaaattaat-----------acacatc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1316336 132 + 181584905 ----------------TTTTTCCCCCCCAAtttactgaagtatgattgatgaatt---aaaaaaaaaaa-aaaaccgtatatatttaaggtgtacaatgtgatgatttga-tatattttgtgaactgatgac-acaatcaaattaat-----------acacatc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 71630 136 + 100774 -----------TTG--TTTTTCCCCCCCAAtttactgaagtatgattgatgaatt---aagaaaaaaaacaaaaccgtatatatttaaggtgtacaatgtgatgatttga-tatattttgtgaactgatgac-acaatcaaattaat-----------acacatc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 31089 132 - 218577 -----------TTG--TTTTtttcccccgatttactgaagtatgattgatgaata---aaaaaaaaacc-aaaaccgtatatatttaaggtgtacaacg---tgatttga-tatattttgtgaactgatgac-acaatcaaattaat-----------acacatc i cerAty1.NW_012004452v1 C 0 I 725 s chlSab2.chr4 1409443 138 + 91010382 -----------TTGCTTtttttcccccagatttactgaggtatgattgatgaatt---aaaataaaaaacaaaagtgcatatatttaaggtgtacaatgtgatgatttga-tatattttgtgaactgatgat-acaatcaagttaat-----------acacatc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 67858 134 + 74206 -----------TTG-TTtttttccccccgatttactgaagtatgattgatgaata---aaaaaaaaaaccaaaaccgtatatatttaaggtgcacaacg---tgatttga-tatattttgtgaactgatgac-acaatcaaattaat-----------acacatc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 806554 135 - 1687011 -----------TTG-CTtttttcccccagatttactgaggcatgattgatgaatt---aaaaaaaaac--agaagtgtacatatttaaggtatacaatgtgatgatttga-tatattttgtgaactgatgac-acaatcaagttaat-----------acacatc i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204166520 119 + 204313951 -----------TTG--TTTTtttccccagatgtactgaggtataattgatgaattaaaaa----------aaacctgtatatatttaaggt-----aca---tgatttca-tatattttgtgaactgaagac-acaagttaatta-------------acacatc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16308385 121 + 16417988 -----------TTG--TTTTCttccccagatgtactgaggtataatatacgaatt---aa----------aaacctgtatatatttaaggtgtacaaca---tgatttca-tatattttgtgaactgaagac-acaagttaatta-------------acacatc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 96220 121 - 306014 -----------TTG--TTTTtttccccagatgtactgaggtataatatatgaatt---aa----------aaacctgtatgtatttaaggtgtacaaca---tgatttca-tatattttgtgaactgaagac-acaagttaatta-------------acacatc i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2126198 146 - 2165740 CACTTTTTTCTTCG-TCTTGTTTTCCcagctttactaaggtatgatcaacaaata---aa----------aa----gtacatatttaagatgtatgatt-gacgatttaagtatacaatgtgaactgatcactataatcaagttaattaacacctctcacacatc i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74334648 2036 + 120421639 I e aotNan1.NW_018494784v1 139146 368 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e canFam3.chr34 11952934 4 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=4423.000000 s hg38.chr3_KI270934v1_alt 125211 1 + 163458 t s gorGor5.CYUI01015759v1 17789 1 + 880730 t i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179847430 1 - 180051392 t i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1316468 1 + 181584905 t i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 71766 1 + 100774 t i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 31946 1 - 218577 T i cerAty1.NW_012004452v1 I 725 C 0 s chlSab2.chr4 1409581 1 + 91010382 c i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 67992 1 + 74206 t i manLeu1.NW_012101728v1 C 0 I 725 s colAng1.NW_012116910v1 806689 1 - 1687011 c i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204166639 1 + 204313951 t i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16308506 1 + 16417988 t i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 96341 1 - 306014 t i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2126344 1 - 2165740 t i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74334648 2036 + 120421639 I e aotNan1.NW_018494784v1 139146 368 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e canFam3.chr34 11952934 4 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=20216.000000 s hg38.chr3_KI270934v1_alt 125212 5 + 163458 atcac s gorGor5.CYUI01015759v1 17790 5 + 880730 atcac i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179847431 5 - 180051392 atcac i rheMac8.chr6 C 0 I 1667 s macFas5.chr6 1316469 5 + 181584905 atcac i macFas5.chr6 C 0 I 1272 s macNem1.NW_012013899v1 71767 5 + 100774 atcac i macNem1.NW_012013899v1 C 0 I 1056 s cerAty1.NW_012004452v1 31947 5 - 218577 atcac i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1409582 5 + 91010382 atcac i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 68718 5 + 74206 atcac i manLeu1.NW_012101728v1 I 725 C 0 s colAng1.NW_012116910v1 806690 5 - 1687011 atcac i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204166640 5 + 204313951 attac i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16308507 4 + 16417988 atta- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 96342 5 - 306014 attat i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2126345 5 - 2165740 ctccc i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74334648 2036 + 120421639 I e aotNan1.NW_018494784v1 139146 368 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e canFam3.chr34 11952934 4 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=173430.000000 s hg38.chr3_KI270934v1_alt 125217 69 + 163458 ctcatacaattatc-----cttttttttggagatacagacacctaaggtctactctcttcgcaaatttcaagtt--- s gorGor5.CYUI01015759v1 17795 69 + 880730 ctcatacaattacc-----cttttttttgaagatacagacacctaaggtctactctcttcgcaaatttcgagtt--- i gorGor5.CYUI01015759v1 C 0 C 0 s cerAty1.NW_012004452v1 31952 69 - 218577 ctcatataattatc-----cttttttttggagatacagacgcctaaggtctactctgtttgtaaatttcaagtt--- i cerAty1.NW_012004452v1 C 0 I 3 s chlSab2.chr4 1409587 68 + 91010382 ctcatacaattat------cgtttttttggagatatagacgcttaaggtctactctgttcgcaaatttcaagtt--- i chlSab2.chr4 C 0 I 3 s manLeu1.NW_012101728v1 68723 69 + 74206 ctcatataattatc-----cttttttttggagatacagacgcctaaggtctactctgtttgtaaatttcaagtt--- i manLeu1.NW_012101728v1 C 0 I 3 s colAng1.NW_012116910v1 806695 68 - 1687011 ttcatacgattat------ggtctttttggagatacagatacttaaggtctactctgttagcaaatttcaagtt--- i colAng1.NW_012116910v1 C 0 I 3 s calJac3.chr2 204166645 68 + 204313951 ctcatctaattatc-----cttttttctggagatatggacacctacagtctacacctt-agcaaatctaaagtt--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16308511 72 + 16417988 --catctaattatcattttttttttttttgagatacggacacctaaagtctactctttcagcaaatctcaagtt--- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 96347 69 - 306014 ctcatctaattatc-----cttttttttggagatacggacacctaaagtctactctcttagcaaatctcaagtt--- i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2126350 71 - 2165740 atcatctcacaattt----ccattttttggtgatgcagacattcaataacta--cttttaacaaatttcaagtatgt i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74334648 2036 + 120421639 I e aotNan1.NW_018494784v1 139146 368 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e macNem1.NW_012013899v1 71772 1056 + 100774 I e canFam3.chr34 11952934 4 + 42124431 I e macFas5.chr6 1316474 1272 + 181584905 I e rheMac8.chr6 179847436 1667 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=5005.000000 s hg38.chr3_KI270934v1_alt 125286 1 + 163458 a s gorGor5.CYUI01015759v1 17864 1 + 880730 a i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 1317746 1 + 181584905 A i macFas5.chr6 I 1272 C 0 s cerAty1.NW_012004452v1 32024 1 - 218577 a i cerAty1.NW_012004452v1 I 3 C 0 s chlSab2.chr4 1409658 1 + 91010382 a i chlSab2.chr4 I 3 C 0 s manLeu1.NW_012101728v1 68795 1 + 74206 a i manLeu1.NW_012101728v1 I 3 C 0 s colAng1.NW_012116910v1 806766 1 - 1687011 a i colAng1.NW_012116910v1 I 3 C 0 s calJac3.chr2 204166713 1 + 204313951 a i calJac3.chr2 C 0 I 4 s saiBol1.JH378155 16308583 1 + 16417988 a i saiBol1.JH378155 C 0 I 4 s cebCap1.NW_016108150v1 96416 1 - 306014 a i cebCap1.NW_016108150v1 C 0 I 136 s otoGar3.GL873745 2126421 1 - 2165740 a i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74334648 2036 + 120421639 I e aotNan1.NW_018494784v1 139146 368 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e macNem1.NW_012013899v1 71772 1056 + 100774 I e canFam3.chr34 11952934 4 + 42124431 I e rheMac8.chr6 179847436 1667 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=6317.000000 s hg38.chr3_KI270934v1_alt 125287 8 + 163458 ---tattaatg s gorGor5.CYUI01015759v1 17865 8 + 880730 ---tattaacg i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 1317747 8 + 181584905 ---TATTCACT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 32025 8 - 218577 ---tattaatg i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1409659 5 + 91010382 ---tatta--- i chlSab2.chr4 C 0 I 1505 s manLeu1.NW_012101728v1 68796 5 + 74206 ---tatta--- i manLeu1.NW_012101728v1 C 0 I 3 s colAng1.NW_012116910v1 806767 5 - 1687011 ---tacta--- i colAng1.NW_012116910v1 C 0 I 696 s calJac3.chr2 204166718 8 + 204313951 ---tattaact i calJac3.chr2 I 4 C 0 s saiBol1.JH378155 16308588 8 + 16417988 ---tattaact i saiBol1.JH378155 I 4 C 0 s otoGar3.GL873745 2126422 8 - 2165740 tgctatta--- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74334648 2036 + 120421639 I e aotNan1.NW_018494784v1 139146 368 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e macNem1.NW_012013899v1 71772 1056 + 100774 I e cebCap1.NW_016108150v1 96417 136 - 306014 I e canFam3.chr34 11952934 4 + 42124431 I e rheMac8.chr6 179847436 1667 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=145498.000000 s hg38.chr3_KI270934v1_alt 125295 47 + 163458 atagccaccgtactgtatg----attttaactgtagccaccatgctgtata s gorGor5.CYUI01015759v1 17873 47 + 880730 atagccaccgtactgtata----atattaactctagccaccatgctgtata i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179849103 47 - 180051392 ATAGCCACCATGCTGTATA----ATATTCACTATAGCCACCGTGCTGTATA i rheMac8.chr6 I 1667 C 0 s macFas5.chr6 1317755 47 + 181584905 ATAGCCACCATGCTGTATA----ATATTCACTATAGCCACCGTGCTGTATA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 72828 47 + 100774 ATAGCCACCATGCTGTATA----ATACTCACTATAGCCACTGTGCTGTATA i macNem1.NW_012013899v1 I 1056 C 0 s cerAty1.NW_012004452v1 32033 47 - 218577 atactcaccgtgctgtata----ataTTCACTATAGCCACCGTGCTGTATA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1411169 47 + 91010382 ATAGCCACCGTGCTGTATA----ACATTCACTATAGCCACCATGCTGTATA i chlSab2.chr4 I 1505 C 0 s manLeu1.NW_012101728v1 68804 47 + 74206 atactcaccgtgctgtata----ataTTCACTATAGCCACCGTGCTGTATA i manLeu1.NW_012101728v1 I 3 C 0 s colAng1.NW_012116910v1 807468 47 - 1687011 ATAGCCACCGTGCTGTATA----ATGTTAACTGTAGCCACCGTGCTGTATA i colAng1.NW_012116910v1 I 696 C 0 s calJac3.chr2 204166726 49 + 204313951 atagcc-tcatgttgtacgttagatATTAACTATAGCC-CCATGTTGTACG i calJac3.chr2 C 0 I 4 s saiBol1.JH378155 16308596 18 + 16417988 atagcc-ccatgttgcata-------------------------------- i saiBol1.JH378155 C 0 I 106 s otoGar3.GL873745 2126430 25 - 2165740 --------------------------ttaattatagctactatactgtatg i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74334648 2036 + 120421639 I e aotNan1.NW_018494784v1 139146 368 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e cebCap1.NW_016108150v1 96417 136 - 306014 I e canFam3.chr34 11952934 4 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=259963.000000 s hg38.chr3_KI270934v1_alt 125342 84 + 163458 atgttaactctggccaccatgctctat----aa----------------------------cattaactctagccaccatgctgtttatcagaccttcagaacttcaccttgtgac s gorGor5.CYUI01015759v1 17920 112 + 880730 acgttaactctagccaccatgctgtat----aacattaactctagccaccatgctgtatagcattaactctagccaccatgctgtatatcagaccttcagaacttcaccttgtaac i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179849150 84 - 180051392 ATGTTAACTGTAGCCACCGTGCTGTAt----aa----------------------------tattcactatagccaccatgttgtatattagaccttctgaacctcacctggtaac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1317802 84 + 181584905 ATGTTAACTGTAGCCACCGTGCTGTAt----aa----------------------------tattcactatagccaccatgttgtatattagaacttctgaacctcacctggtaac i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 72875 84 + 100774 ATGTTAACTGTAGCCACCGTGCTGTAt----aa----------------------------tattcactatagccaccgtgttgtatattagaacttctgaagttcacctcgtaac i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 32080 84 - 218577 ACGTTAACTGTAGCCACCGTGCTGTAt----aa----------------------------tattcactatagccaccatgttgtatattagaacttctgaagttcaccttgtaac i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1411216 84 + 91010382 ATGTTAACTGTAGCCACCGtactgtat----aa----------------------------tattcactatagccaccatgttgtatattagaccttctgaacctcacctggtaac i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 68851 84 + 74206 ATGTTAACTGTAGCCACCGTGCTGTAt----aa----------------------------tattcactatagccaccatgttgtatattagaacttctgaagttcacctcgtaac i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 807515 84 - 1687011 ATGTTAACTGTAGCCACCGTGCTGTAt----aa----------------------------tattcactatagccaccatgttgtatattagaccttctgaacctcacctggtaat i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204166779 86 + 204313951 ATATTAACTATAGCC-CCATGTTGTACGTTAGA----------------------------tattaactatagcc-ccatgttgtatgttagctcttcagaacttcatcttATaac i calJac3.chr2 I 4 I 78 s otoGar3.GL873745 2126455 43 - 2165740 ------tctttatataccatgcta-at----aa---------------------------------------------------------aaatcttcagaact-----ttgtaac i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74334648 2036 + 120421639 I e aotNan1.NW_018494784v1 139146 368 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e saiBol1.JH378155 16308614 106 + 16417988 I e cebCap1.NW_016108150v1 96417 136 - 306014 I e canFam3.chr34 11952934 4 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=782030.000000 s hg38.chr3_KI270934v1_alt 125426 247 + 163458 gggaagttacacctttaatcagcatcgccacagtctgcattcccc-----cagcccctggcaaccactgtcctattctgtttctgtgagttgtgacagttttaga-tccacatatgagtga---catgcagtatctgtctttctgtgcctgggtcgtttcacttaacataatg-actttgggttcatccacgttgtcacacatgacaggatttccttcgttttcatagctgaataatattcagttgtgtacacacac s gorGor5.CYUI01015759v1 18032 246 + 880730 gggaagttacacctttaatcagcatcgccacagtctgcattcccc-----cagcccctggcaaccactgtcctactctgtttctgtgagttgtgacagttttaga-tccacatatgagtga---catgcaatatctgtgtttctgtgcctggctcgtttcacttagcataatg-actttgggttcatccacattgtcacacatgacaggatttccttt-ttttcatagctgaataatattcagttgtgtatacacaa i gorGor5.CYUI01015759v1 C 0 I 315 s rheMac8.chr6 179849234 248 - 180051392 gagaagtcacacctttcatcagcatcgctgcagtctgcattcccc-----cagcccctggcaaccaccgtcctactctgtttccatgagttttgacttttttagattccacatataagtga---catgcagtatctgtcattctgtgcctggcttgtttcacttaacataatg-actttgggttcatccctgttgtcacaaatgacaggattcccttcattttcatagctgagtaatattcagttgcgtatacacac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1317886 248 + 181584905 gagaagtcacacctttcatcagcatcgctgcagtctgcattcccc-----cagcccctggcaaccaccgtcctactctgtttccatgagttttgacttttttagattccacatataagtga---catgcagtatctgtcattctgtgcctggcttgtttcacttaacataatg-actttgggttcatccctgttgtcacaaatgacaggattcccttcattttcatagctgagtaatattcagttgcgtatacacac i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 72959 248 + 100774 gggaagtcacacctttcatcagcatcgctgcagtctgcattcccc-----cagcccctggcaaccaccgtcctactctgtttccatgagttttgacttttttagattccacatataagtga---catgcagtatctgtcattctgtgcctggcttgtttcacttaacataatg-actttgggttcatccctgttgtcacaaatgacaggattcccttcattttcatagctgagtaatattcagttgcgtatacacac i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 32164 248 - 218577 gggaagtcacacctttcatcagcatcgctgcagtctgcattcccc-----cagcccctggcaaccactgtcctattctgtttctttgagttttgacttttttagattccacatataagtga---catgcagtatctgtcattctgtgcctggcttgtttcacttaacataatg-actttgggttcatccctgttgtcacaaatgacaggattcccttcgttttcatagctgagtaatattcagttgcgtatacacac i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1411300 245 + 91010382 gagaagtcatacctttcatcagcatcgctgcagtctgcattcccc-----cagcccctggcaaccactgtcctactctgtttctatgagttttgacttttttagattccacatagaagtga---catgcggtatctgtcattctgtgcctggcttgttttacttaacgtaatg-actttgggttcatccctcttgtcacaaatgacgagattcccttcgttttcatagctgagtaatattcagctgcgtataca--- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 68935 248 + 74206 gggaagtcacacctttcatcagcatcgctgcagtctgcattcccc-----cagcccctggcaaccactgtcctattctgtttctttgagttttgacttttttagattccacatataagtga---catgcagtatcagtcattctgtgcctggcttgtttcacttaacataatg-actttgggttcatccctgttttcacaaatgacaggattcccttcgttttcatagctgagtaatattcagttgcgtatacacac i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 807599 248 - 1687011 gggaagtcacacctttcattagcatcgccgcagtctgcattcccc-----cagcccctggcaaccactctcctactctgtttccatgagttttgacttgtttagattccacgtataagtga---catgcagtatctgttattctgtgcccggcttgtttcagttaacataatg-acttcgggttcacacatgctgtcacaaatgacaggattcccttcattttcacagctgagtaatattcagttgtgtatacacac i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 2126498 193 - 2165740 -tgaaat-gcacctttaaccaacatgtccccaatctgtaattcccctcctccgtgcctggcatccactgt-----tctgttt-------ttcaaactcttttagactccacacataagtgacatcatgcagtatttgtctttctatacctggcttatttcatttaacaaaccatcctccgggttcatccatgttatcat----------------------------------taatactc---------------- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74334648 2036 + 120421639 I e aotNan1.NW_018494784v1 139146 368 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e saiBol1.JH378155 16308614 106 + 16417988 I e calJac3.chr2 204166865 78 + 204313951 I e cebCap1.NW_016108150v1 96417 136 - 306014 I e canFam3.chr34 11952934 4 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=784655.000000 s hg38.chr3_KI270934v1_alt 125673 244 + 163458 cacattgtcattaaacaccaa-aaatttttaggttgtttccatatctcgggtattgtgaataacgctgcaatgaac--------atgggggtccaggtgtctctttgagcttctgatttcatgccctttggatatacacccagaaatgaggttgctggagcacatggtagtcctgt----------gacttttgaggaacctcca----gagttttccacaatagttgtactaatttacattcccaccaacagcacac-agggttccc s gorGor5.CYUI01015759v1 18593 244 + 880730 cacattgtcattaaacaccaa-aaatttttaggttgtttccatatctcgggtattgtgaataacgctgcaatgaac--------atgggggtccaggtgtctctttgagcttctgatttcatgccctttggatatacacccagaaatgaggttgctggagcacatggtagtcctgt----------ggcttttgaggaacctcca----gagttttccataatagttgtactaatttacattcccaccaacagcacac-agggttccc i gorGor5.CYUI01015759v1 I 315 C 0 s rheMac8.chr6 179849482 245 - 180051392 cacattttccttaaacaccaacacatatttaggttttttccatatctcgggaactgtgaacaacgctgcaatgaac--------atgggggtccaggtgtctctttgaacttctgatttcatgccctttggacatacacccagaaatggggttgctggagcacatggtagtcctgt----------gaattttgaggaacctcca----gagttttccacaatagttgtactaatttacgttccccccaacagcacac-agggttccc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1318134 244 + 181584905 cacattttccttaaacaccaacacatacttaggttttttccatatctcgggaactgtgaacaacgctgcaatgaac--------atgggggtccaggtgtctctttgagcttctgatttcatgccctttggatatacacccagaaatggggttgctggagcacatggtagtcctgt----------gaattctgaggaacctcca----gagttttccacaatagttgtactaatttacattccccccaacagcacac-aggg-tccc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 73207 234 + 100774 cacattttccttaaacaccaacacatatttaggttttttccatatctcgggaactgtgaacaacgctgcaatgaac--------atgggggtccaggtgtctctttgagcttctgatttcatgccctttggatatacacccagaaatggggttgctggagcacatggtagtcctgt----------gaattctgaggaa--------------tttccacaatagttgtactaatttacattccccccaacagcacac-aggg-tccc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 32412 235 - 218577 cacattttccttaaacaccaacacatacttaggttttttccacatctcgggaactgtgaacaacgctgcaatgaac--------atgggggtccaggtgtctctttgagcttctgatttcacgccctttggatatacacccagaaatggggttgctggagcacatggtagtcctgt----------gaattctgaggaa--------------tttccacaacagttgtactaatttacattccccccaacagcacac-agggtcccc i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1411545 245 + 91010382 cacattttccttaaacatcaacacatatttaggttttttccacatcttgggaactgtgaacaacgctgcaatgaac--------atgggggtccaggcgtctctttgagcttctgatttcatgccctttgaatatacacccagaaatggggttgctggagcacatggtagtcctgt----------gaattctgaggaacctcca----gagttttccacaatagttgtactaatttacattccccccaacagcacac-agggttccc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 69183 235 + 74206 cacattttccttaaacaccaacacatacttaggttttttccatatctcgggaactgtgaacaacgctgcaatgaac--------atgggggtccaggtgtctctttgagcttctgatttcacgccctttggatatacacccagaaatggggttgctggagcacatggtagtcctgt----------gaattctgaggaa--------------tttccacaacagttgtactaatttacattccccccaacagcacac-agggtcccc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 807847 239 - 1687011 cacattttcattaaacaccaacacatatttaggttgtttccatatctcgggtactgtgaacaacactgcaatgaac--------atgggggtccaggtgtctctttgagcttctgatttcatgccctttggatatacacccagaaatggggttgctagagcacatggtagtcctgt----------gaattttgaggaacctcca----gagttttccacaatagttgtactaatttaccttccccccaacagcacac-ag------c i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 2126691 263 - 2165740 --cattttcattagtta-caacagacctttagcctgttctcataacttggctactgtgaat-atgctgcaatgagcacatggagatggaagtacagacatttctttgagctactcatgtctcaacgttcaggttcatacccagaaataagactgctggatgatatggttgttttatttttaatttaattttttgaggtacctccattttgag-gtacaaaaatagttgcaccaatttaccttcttaccaacagcgtatgagggtttcc i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74334648 2036 + 120421639 I e aotNan1.NW_018494784v1 139146 368 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e saiBol1.JH378155 16308614 106 + 16417988 I e calJac3.chr2 204166865 78 + 204313951 I e cebCap1.NW_016108150v1 96417 136 - 306014 I e canFam3.chr34 11952934 4 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=872661.000000 s hg38.chr3_KI270934v1_alt 125917 280 + 163458 ttttctccacatcctcatcaacactcactatcttttgtcctcttggtaacagccattctaactggagcgagatgagatgata-ctcattggggttttaatttgcatttctctggtgcttggtgatgttgagcattttttcatacatcaactggccatttgtatgtcttc---tctggaaaaatatctattcaagtcctttgcccatttttagtagggttgttttttag---tagggtttagtaggttggt----ttt-agtagggcttttttttattttt-tatttttttttg s gorGor5.CYUI01015759v1 18837 275 + 880730 ttttctccacatcctcatcaacactcactatcttttgtcctcttggtaacagccattctaactggagcgagatgagatgata-ctcactggggttttaatttgcatttctctggtgcttagtgatgttgagcattttttcatacataaattggccatttgtacgtcttc---tctggaaaaatatctattcaagtcctttgcccatttttagtagggttgttttttag---tagggtttagtaggttggt----tt--agtagggctttttttttttttt-t----ttttttg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179849727 263 - 180051392 ttttctccacatcctcaccaacacttgctctcttttgtcctcttggtaacagccattctacctggagtgagatgagatgatgtctcattggggttttaatttgcatttctctggtgcttagtgatgttgagcattttttcatacatcaattggccatttgtttgtcttc---tctggaaaaatatctattcaagtcctttgcccatttttagtagggttg-tttttag---tagggtttagtaggttgtt----ttt-agtaggg-------------tt-t----ttttttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1318378 264 + 181584905 ttttctccacatcctcaccaacacttgctctcttttgtcctcttggtaacagccattctacctggagtgagatgagatgatgtctcattggggttttaatttgcatttctctggtgcttagtgatgttgagcattttttcatacatcaattggccatttgtttgtcttc---tctggaaaaatatctattcaagtcctttgcccatttttagtagggttgttttttag---tagggtttagtaggttgtt----ttt-agtaggg-------------tt-t----ttttttt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 73441 264 + 100774 ttttctccacatcctcaccaacacttgctctcttttgtcctcttggtaacagccattctacctggagtgagatgagatgatgtctcattggggttttaagttgcatttctctggtgcttagtgatgttgagcattttttcatacatcaattggccatttgtttgtcttc---tctggaaaaatatctattcaagtcctttgcccatttttagtagggttgttttttag---ttgggtttagtaggttgtt----ttt-agtaggt-------------tt-t----ttttttt i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 32647 263 - 218577 ttttctccacatcctcaccaacacttgctctcttttgtcctcttggcaacagccattctacctggagtgagatgagatgatgtctcattggggttttaatttgcatttctctggtgcttagtgatgttgagcattttttcatacatcaattggccatttgtttgtcttc---tctggaaaaatatctattcaagtcctttgcccatttttagtagggttgttttttag---tagggtttagtaggttgtt----ttt-agtaggg--------------t-t----ttttttt i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1411790 266 + 91010382 ttttctccacatcctcaccaacacttgctctcttttgtcctcttggtaacagccattctacctggagtgagatgagatgatgtctcattggggttttaatttgcatttctctggtgcttagtgatgttgagcattttttcatacatcaattggccatttgtttgtcttc---tctggaaaaatatctattcaagtcctttgcccatttttagtagggttgttttttag---tagggtttagtaggttgtt----tttcagtaggg-------------ttgt----ttttttg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 69418 263 + 74206 ttttctccacatcctcaccaacacttgctctcttttgtcctcttggtaacagccattctacctggagtgagatgagatgatgtctcattggggttttaatttgcatttctctggtgcttagtgatgttgaccattttttcatacatcaattggccatttgtttgtctcc---tctggaaaaatatctattcaagtcctttgcccatttttagtagggttggtttttag---tagggtttagtaggttgtt----ttt-agtaggg-------------t--t----ttttttt i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 808086 249 - 1687011 ttttctccacatcctcaccaacacttactctcttttgtcctcttggtaacagccattctaactggagtgagatgagatgatgtctcattggggttttaatttgcatttctttggtgcttagtgatgctgagcattttttcatacatcaattggcca----tttgtcttc---tctggaaaaatatctattcaagtcctttgcccatttttagtagagttgttttttag---tagggtttagtaggttg----------ggt--------------------t----ttttttt i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 2126954 248 - 2165740 ttttatctacatccccatcaacactagttacc--ttgtctttt------------ttctcactagggtgaagtgaca-------ttattgtggttttgatttgcctttccctg--gattagagatgacgaccattttttcatatactagttagccacttatgtgtcttc---cttggaaaaatgcctatttgagtcgtttgcccatttccaactgagttgtttttttgctactgagttgcatgagttctttacgtta-agaaaga-------------ag-t----taatttt i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74336684 225 + 120421639 TTTCCTCTACATCTTCATCAACATTTACCATCTGT----ATCATTACATTAACCATCC-----------------------GCACAAAtatggatgttacttgaattctccagatgttcaatggtgctgagca--ctttcataaatttgctgaccatgtgtattccctccaacctgg--aaacatctattcaggttctatacctattt-aaaaatgtttgtttACT-----TAAACtttctttccttttc----ttt---------------------tt-t----tttttt- i mm10.chr13 I 2036 I 88 e aotNan1.NW_018494784v1 139146 368 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e saiBol1.JH378155 16308614 106 + 16417988 I e calJac3.chr2 204166865 78 + 204313951 I e cebCap1.NW_016108150v1 96417 136 - 306014 I e canFam3.chr34 11952934 4 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=-3285.000000 s hg38.chr3_KI270934v1_alt 126197 1 + 163458 c-------- s gorGor5.CYUI01015759v1 19112 1 + 880730 c-------- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179849990 1 - 180051392 c-------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1318642 1 + 181584905 c-------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 73705 1 + 100774 c-------- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 32910 1 - 218577 c-------- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1412056 1 + 91010382 c-------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 69681 1 + 74206 c-------- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 808335 1 - 1687011 c-------- i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 2127202 9 - 2165740 ggaagttta i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74336909 88 + 120421639 I e aotNan1.NW_018494784v1 139146 368 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e saiBol1.JH378155 16308614 106 + 16417988 I e calJac3.chr2 204166865 78 + 204313951 I e cebCap1.NW_016108150v1 96417 136 - 306014 I e canFam3.chr34 11952934 4 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=408817.000000 s hg38.chr3_KI270934v1_alt 126198 80 + 163458 tattttagatactaagatatcattagatatatggtttggaaaatatttttt-cccaccctgtagttttgctgatttttttt s gorGor5.CYUI01015759v1 19113 81 + 880730 tattttagatactaagatatcattagatatatggtttggaaaatatttttttcccaacctgtagttttgctgatttttttt i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179849991 79 - 180051392 tattttagatactaaaatattattagatataaggtttggaaaatatttttt-cccaacctgtagttttgctga-ttttttc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1318643 79 + 181584905 tattttagatactaaaatattattagatataaggtttggaaaatatttttt-cccaacctgtagttttgctga-ttttttc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 73706 79 + 100774 tattttagatactaagatattattagatataaggtttggaaaatatttttt-cccaacctgtagttttcctga-ttttttc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 32911 79 - 218577 tattttagatactaagatattcttagatatatggtttggaaaatatttttt-cccaacctgtagttttgctga-ttttttc i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1412057 79 + 91010382 tattttaggtagaaagataatattagatatatggtttggaaaatatttttt-cctaacctgtagttttgctga-ttttttc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 69682 79 + 74206 tattttagatactaagatattattagatataaggtttggaaaatatttttt-cccaacctgtagttttgctga-ttttttc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 808336 79 - 1687011 tattttagatactaagatattattagatacaaggtttggaaaatatttttt-cccaacctgtagttttgctga-tttcttc i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204166943 63 + 204313951 tattttagatattgaggtattatcagacaaatggttttgaaaatattttcc-cccaacctatag----------------- i calJac3.chr2 I 78 C 0 s saiBol1.JH378155 16308720 79 + 16417988 tattttagatattaaggtattatcagataaatgcttttgaaaatatttttt-cccaacctgtagttttgctga-ttgtttc i saiBol1.JH378155 I 106 C 0 s cebCap1.NW_016108150v1 96553 79 - 306014 tattttagatattaaggtattatgagataaatggttttgaaaatatttttt-ccaaacctatagttttgctga-ttgtttc i cebCap1.NW_016108150v1 I 136 C 0 s otoGar3.GL873745 2127211 77 - 2165740 -attctagaagttaatcccttattgcatatatagttt-gcaaatattttct-cccaatttgtagtcctgctga-ttatttc i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74336909 88 + 120421639 I e aotNan1.NW_018494784v1 139146 368 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e canFam3.chr34 11952934 4 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=96056.000000 s hg38.chr3_KI270934v1_alt 126278 24 + 163458 cttggctgtactgacacttctt-aa s gorGor5.CYUI01015759v1 19194 24 + 880730 cttggctgtactgacactactt-aa i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179850070 23 - 180051392 cttcgctgtactgacagttttt--a i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1318722 23 + 181584905 cttcgctgtactgacagttttt--a i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 73785 23 + 100774 cttcgctgtactgacagttttt--a i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 32990 23 - 218577 cttcgctgtactgacagttttt--a i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1412136 23 + 91010382 cttcactatactgacagctttt--a i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 69761 23 + 74206 cttcgctatactgacagttttt--a i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 808415 24 - 1687011 cttggccgtattgacacttttt-aa i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204167006 22 + 204313951 --TTGTTGTACAGATAGTTTTT-AA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16308799 24 + 16417988 ctttgttgtacagatacttttt-aa i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 96632 24 - 306014 ctttgctgtacagacacttttt-aa i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2127288 25 - 2165740 ctatgctgtacagaaactttttgag i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74336997 24 + 120421639 ctgagatataccttcagcTTAT-AA i mm10.chr13 I 88 C 0 e aotNan1.NW_018494784v1 139146 368 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e canFam3.chr34 11952934 4 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=259178.000000 s hg38.chr3_KI270934v1_alt 126302 47 + 163458 cttTTAAAGTGGCTAAAG-TAAC----TGCCACTGTATAAAATTAAAGTTTT s gorGor5.CYUI01015759v1 19218 47 + 880730 cttTTAAAATGGCTAAAG-TAAC----TGCCACTGTATACAATTAAAGTTAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179850093 47 - 180051392 ctttgaAAATGGTTAAAG-TAAC----TGACAGTGTATAAAATTAAAGTTAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1318745 47 + 181584905 ctttgaAAATGGTTAAAG-TAAC----TGACAGTGTATAAAATTAAAGTTAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 73808 47 + 100774 ctttgaAAATGGTTAAAG-TAAC----TGACAGTGTATAAAATTAAAGTTAC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 33013 47 - 218577 ctttgaAAATGGTTAAAG-TAAC----TGACAGTGTATAAAATTAAAGTTAC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1412159 47 + 91010382 ctttgaAAATGGTTAAAG-TAAC----TGACAGTGTATAAAATTAAAGTTAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 69784 47 + 74206 ctttgaAAATGGTTAAAG-TAAC----TGACAGTGTATAAAATTAAAGTTAC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 808439 47 - 1687011 ctttgaAAATGGTTAAAG-TAAC----TGACAGTGTATAAAATTAAAGTTAC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204167028 51 + 204313951 CTTTTAAAATGGTTAAAA-TAACAGATTGACAGTGGATAAAATTAAAGTTAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16308823 50 + 16417988 cttTTAAAATTGTTAAAA-TAACAGATTGACAGTGGATCAAGTCAAAG-TAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 96656 52 - 306014 cttTTAAAATGGTTAAAATTAACAGATTGACAGTGGATAAAATTAAAGTTAC i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2127313 50 - 2165740 tttTTTTAATGGCTAAAG-CAACAAACTGACAGTGTAT-AAATCAAATTTAT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74337021 27 + 120421639 CTTTAAAAATGGTAAAAA---------TGAAATCTT---------------- i mm10.chr13 C 0 C 0 s canFam3.chr34 11952938 50 + 42124431 CTTTTAAAG-GCTTAAAA-TAAAAGACTAACAGTGTATCAAATGGAATTTAC i canFam3.chr34 I 4 C 0 e aotNan1.NW_018494784v1 139146 368 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=876095.000000 s hg38.chr3_KI270934v1_alt 126349 129 + 163458 TTATTTTCATTATGTGGAGAAGACAGACTTATCTATCCCAG-GAATCAGTATAAACATAGAACCCACTAAA-ACAAGAGGGATTTTGCCAGAAAA-CCCCATGTGActcttcgggccacagtttcctcatct---------------------------- s gorGor5.CYUI01015759v1 19265 130 + 880730 TTATTTTCATTATGTGGAGAAGACAGACTTATCTATCCCAG-GAATCAGTATAAACACAGAACCCACTAAA-ACAAGAGAGATTTTGCCAGAAAAACCCCATGTGACTCTTCGGGCCGCAGTTGCCTCACCT---------------------------- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179850140 128 - 180051392 TTATTTTCGTTACGTGGAGAAGAAGGACTTACCCATCCCAG-GAATCAGTATTAACACAGTACCCACTAAA-ACAAGAGGGATTTTGCCAGAAA--CCCCATGGGActcttcgggccgcagtttcctcatct---------------------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1318792 128 + 181584905 TTATTTTCGTTATGTGGAGAAGAAGGACTTACCCATCCCAG-GAATCAGTATTAACACAGTACCCACTAAA-ACAAGAGGGATTTTGCCAGAAA--CCCCATGGGActcttcgggccgcagtttcctcatct---------------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 73855 129 + 100774 TTATTTTCGTTATGTGGAGAAGAAGGACTTACCCATCCCAG-GAATCAGTATTAACACAGTACCCACTAAA-ACAAGAGGGATTGTGCCAGAAAC-CCCCATGGGActcttcgggctgcagtttcctcatct---------------------------- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 33060 129 - 218577 TTATTTTCGTTATGTGGAGAAGAAGGACTTACCCATCCCAG-GAATCAGTATTAACACAGTACCCACTAAA-ACAAGAGGGATTTTGCCAGAAAC-CCCCATGGGActctttgggccgcagtttcctcatct---------------------------- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1412206 129 + 91010382 TTATTTTCGTTATGTGGAGAAGAAGGACTTACCCATCCCAG-GAATCAGTATTAACACAGTACCCACTAAA-ACAAGAGGGATTTTGCCAGAAAC-CCCCATGGGActcttcgggccgcagtttccgcatct---------------------------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 69831 129 + 74206 TTATTTTCATTATGTGGAGAAGAAGGACTTACCCATCCCAG-GAATCAGTATTAACACAGTACCCACTAAA-ACAAGAGGGATTTTGCCAGAAAC-CCCCATGGGActcttcgggccgcagtttcctcatct---------------------------- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 808486 129 - 1687011 TTATTTTCATTATGTGGAGAAGAAGGACTTACCCATCCCAG-GAATCAGTATGAACAGAGTACCCACTAAA-ACAAGAGGGATTTTGCCAAAAAA-CCCCATGGGActctttgggctgcagtttcctcatct---------------------------- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204167079 126 + 204313951 TTA-TTTCATTATGTGGAGAAGCAAGAGTTATCCAACCTAG-GTACCAGTATAAACACAGTACCCACTAAA-ACAAGA--GATTTTGCCAGAAAA-CCCCATGTGActctttaggccacagtttcctcatat---------------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16308873 126 + 16417988 TTATTTTTATTATGTAGAGAAGCAAGAGTTATCCATCCCAG-GAATCAGTATAACCACAGTACCCACT-AA-ACAAGA--GATTTTGCCAGAAAA-CCCCATGTGACTCTTTAGGCTGCGGTTTCCTCATCT---------------------------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 96708 125 - 306014 TTATTTTCATTATGTGGAGAAGCA--AGTTATCCACCCCAG-CAATCAGTGTAAACACAGTGCCCACTAAA-ACAAGA--GATTTTGCCAGAAAA-CCCCATGTGActctttaggctgcagtttcctcgtct---------------------------- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 139514 127 - 211231 TTATTTTCATTATGTGGAGAAGCAAGAGTTACCCATCCCAG-GAATCGGTATAAACACAGTACCCACTGAA-ACAAGA--GATTTTGCCAGAAAA-GCCCATGGGActctttaggccacagtttcctcatct---------------------------- i aotNan1.NW_018494784v1 I 368 I 134 s otoGar3.GL873745 2127363 116 - 2165740 TTATTTTCATCATGTGAAGAAACA-GAATTATCTATTTCAG-GAATTAATAT-----------CCATTAAA-GCAAGGGAAATTATA-CAGAAAA-CTCCATGTGActcttcaggcctcagtttcctcatct---------------------------- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74337048 110 + 120421639 --------ATTAACTG----AAATGTACTTTATGATTCTAA-GAATCAGTAT--ACTTAGTAAACAAGAAA-GCAGGA--AAGTTTATCTGAAAA-TACCATGTGACTCTCTAAGCT-TACTATTTATAT------------------------------ i mm10.chr13 C 0 C 0 s canFam3.chr34 11952988 148 + 42124431 TTATTTTCATCATGTGAACAAA----------CTACTCCAGAAAATTGGTATAAACACAGTACCCACTAAGCAAAAGAGAGGTTAGTCCAGAAAA-TGTCATGTGACTCTCCAACCC-CAGTTTCTTTCTTTTtttttttttttaaatttttatttattt i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 365248 2350 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=245683.000000 s hg38.chr3_KI270934v1_alt 126478 79 + 163458 -------------------aaaatc---gggaGAGGTACGCT--GTG--------------------------AACCTG---------ACGGCAGCCACTACCGACTAATGAGGGCCA---TGCTT-----------------------------------------TCTCAC---------------------------CCCGAGGCA------------ s gorGor5.CYUI01015759v1 19395 79 + 880730 -------------------AAAATC---GGGAGAGGTAAGCT--GTG--------------------------AACCTG---------ACGGCAGCCACTACCGACTACTGAGGGCCA---TGCTT-----------------------------------------TCTCAC---------------------------CCCGAGGCA------------ i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179850268 81 - 180051392 -------------------aaaatc---gggaGAGGTAAGCT--GTG--------------------------AACCTG---------ACGGCAGCCACCGCCGTCTACTGAGGGCCA---TGCTT-----------------------------------------TCTCGC-----------------------C--GCCTGAGGCA------------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1318920 81 + 181584905 -------------------aaaatc---gggaGAGGTAAGCT--GTG--------------------------AACCTG---------ACGGCAGCCACCGCCGTCTACTGAGGGCCA---TGCTT-----------------------------------------TCTCGC-----------------------C--GCCTGAGGCA------------ i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 73984 81 + 100774 -------------------aaaatc---gggaGAGGTAAGCT--GTG--------------------------AACCTG---------ACGGCAGCCACCCCCGTCTACTGAGGGCCA---TGCTT-----------------------------------------TCTCGC-----------------------C--GCCTGAGGCA------------ i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 33189 81 - 218577 -------------------caaatc---gggagaggtaagct--GTG--------------------------AACCTG---------ATGGCAGCCACCCCCGTCTACTGAGGGCCA---TGCTT-----------------------------------------TCTCGC-----------------------C--GCCTGAGGCA------------ i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1412335 81 + 91010382 -------------------aaaatt---gggagaggtaagct--GTG--------------------------AACCTG---------ATGGCAGCCACCCCCGTCTACTGAGGACCA---TGCTT-----------------------------------------TCTCAC-----------------------C--GCCTGAGGCA------------ i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 69960 81 + 74206 -------------------aaaatc---gggaGAGGTAAGCT--GTG--------------------------AACCTG---------ATGGCAGCCACCCCCGTCTACTGAGGGCCA---TGCTT-----------------------------------------TCTCGC-----------------------C--GCCTGAGGCA------------ i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 808615 81 - 1687011 -------------------aaaatc---gggaGAGGTAAGCT--GTG--------------------------AACCTG---------ATGGCAGCCACTCCGGTCTACTGAGGGCCA---TGCTT-----------------------------------------TCTCAC-----------------------C--GCCTGAGGCA------------ i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204167205 65 + 204313951 -------------------aaagtc---aggaggggttagct--gtt------------------------------------------------------ccatctcctgagggccc---tGCTT-----------------------------------------tctcaacc--------------------tc--ccacaaggtg------------ i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16308999 84 + 16417988 -------------------AAGGTC---AGGAGGGGTCAGCT--GTT--------------------------ACCCTG---------ACGGCCGCCACTACCACCTGCTGAGGGCCC---CGCTT-----------------------------------------TATCATCC--------------------TC--CCAcagggcg------------ i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 96833 84 - 306014 -------------------aaagtc---aggaagggttagCT--GTT--------------------------ACCCTG---------ACAGCTGCCACTACCATCTGCTGAGGGCCC---TGCTT-----------------------------------------TCTcaacc--------------------tc--ccacaaggcg------------ i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2127479 112 - 2165740 -------------------acaatc---aggagaggtacact--gtgtaaccctcatggactctctgagctttgacCTA---------ATGGTAGCCACTGCTATATCCTGAGGGCTACACTGCAC-----------------------------------------TCTCAT-----------------------CCACCTcagggca------------ i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74337158 36 + 120421639 -------------------TAAAAC---AGGTAAAGTAAGCT--TTA-------------------------TAATC--------------------------------------CCA---AATTT----------------------------------------------------------------------------------------------- i mm10.chr13 C 0 C 0 s canFam3.chr34 11953136 190 + 42124431 atgatagtgagagagagagagaggcagagggagaagcaggctccatg--------------------------cacccggagcccgatgtgggattcgatcccgggtctccaggatca---cgccctgggccaaaggcaggcgccaaaccgctgcgccacccagggatcccATCCAACCCCAGTTTCTTCAAGGGTC--CTCCCAGGTGCAAAGtaaggca i canFam3.chr34 C 0 C 0 e aotNan1.NW_018494784v1 139641 134 - 211231 I e dasNov3.JH577625 365248 2350 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=771513.000000 s hg38.chr3_KI270934v1_alt 126557 102 + 163458 GGTGCTGC--TGTCCTCA---------CCCTTTACAGGTGAGGAACCATGGCTGGGAAAGGCCATCACCCTCACGTGGTTATATCAAGGCCTGTGTCTGAACTGCT-ATTCTAC s gorGor5.CYUI01015759v1 19474 102 + 880730 GGTGCTGC--TGTCCTCA---------CCCTTTACAGGTGAGGAACCACGGCTGG-AAAGGCCATCACCCTCACACGGTTATATCAAGGCCTGTGTCTGAACTGTTTATTCTAC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179850349 102 - 180051392 GGTGCTCC--CGTCCTTA---------CCCTTCACAGGTGAGGAACCACGGCTGGGAGAGGCCATCACTCTCACAAGGTTATATCAAGGCCTGTGTCTGAACCGTT-ATTCTAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1319001 102 + 181584905 GGTGCTCC--CGTCCTTA---------CCCTTCACAGGTGAGGAACCACGGCTGGGAGAGGCCATCACCCTCACAAGGTTATATCAAGGCCTGTGTCTGAACCGTT-ATTCTAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 74065 102 + 100774 GGTGCTCC--CGTCCTTA---------CCCTTCACAGGTGAGAAACCACGGCTGGGAAAGGCCATCACCCTCACAAGGTTATATCAAGGCCTGTGTCTGAACCGTT-ATTCTAC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 33270 102 - 218577 GGTGCTCC--CGTCCTTA---------CCCTTTACAGGTGAGCAACCACGGCTGGGAGAGGCCATCACCCTCACAAGGTTATATCAAGGCCTGTGTCTGAACCGTT-ATTCTAC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1412416 102 + 91010382 GGTGCTCC--CGTCCTTA---------CCCTTCACAGGGGAGCAACCACGGCTGGGAGAGGCCATCACCCTCACAAGGTTATATCAAGGCCTGTGTCTGAACCGTT-ATTCTAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 70041 102 + 74206 GGTGCTCC--CGTCCTTA---------CCCTTTACAGGTGAGCAACCACGGCTGGGAGAGGCCATCACCCTCACAAGGTTATATCAAGGCCTGTGTCTGAACCGTT-ATTCTAC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 808696 102 - 1687011 GGTGCTCC--CGTCCTTA---------CCCTTTACAGGTGAGGAACCACGGCTGGGAGAGGCCATCACCCTCACAAGGTTGTATCAAGGCCTGTGTCTGAACCGCT-ATTCTAC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204167270 102 + 204313951 ggtgctgc--tgtcctca---------tggtttacagatgaggaaccacagctgggaaaggccatcatcctcacaaggttaTGTCAAGGCCTGTGTCTGAACCGTT-ATTCTAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16309083 102 + 16417988 ggtgctgc--tgtcctca---------cctgttacagatgaggaaccacagctgggaaaggccatcaccctcacaaggttaTGTCAAGGCCTGTGCCTGAACCGTA-ATTCTAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 96917 102 - 306014 ggtgctgc--tgtcctca---------ccctttacagatgaggaaccacagctgggaaaggccatcaccctcacaaggttaTGTCAAGGCCTGTGTCTGAACCGTT-ATTCTAC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 139775 102 - 211231 GGTGCCGC--TGTCCTGA---------CCCTTTGCAGATGAGGAACCACAGCTGGGAAAGGCCATCACCCTCACAAGGTTATGTCAAGGCCTGTGTCTGAACCGTT-ATTCTAC i aotNan1.NW_018494784v1 I 134 C 0 s otoGar3.GL873745 2127591 98 - 2165740 ggtgccac--tgtcatct---------ccctt-atagatgaggaactaaggctgg-aaagactaTCATTTTCATA--GTTATGTCAAGATCTATGTGTAAACTGTT-ACTCTAT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74337194 111 + 120421639 --TGCCCCATTATGCTCAGAGAACATCTATATTGTGACAAAGGTACCAAGGCTGGGAAAGGTTATCTTCTGCATGAGATGACATGAAGGCCTACGTCTGACCCATT-GCCCTGA i mm10.chr13 C 0 C 0 s canFam3.chr34 11953326 100 + 42124431 ggtgctat--gattgtc----------tccttttcagatagagaactgaggctgacaaaatttaTTATACTC-CTGGGTTAGGTCACCACCTGGGACTGAACCACT-ATTCCGT i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 365248 2350 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=506560.000000 s hg38.chr3_KI270934v1_alt 126659 69 + 163458 AATGCCTCTATTTTCCTTAAAATAAAGAGACTCTA--------AATGAAATTT-ATTCATT--------TTTACAAAGGAAATAAA s gorGor5.CYUI01015759v1 19576 70 + 880730 AATGCCTCTATTTTCCCTAAAATAAAGACACTCTA--------AATGAAATTTTATTCATT--------TTTACAAAGGAAATAAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179850451 69 - 180051392 AATGCCTCTATTTTCATTAAAATAAAGAAACTCTA--------AATGAAAGTT-ATTCATT--------TTTATAAATGAAATAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1319103 69 + 181584905 AATGCCTCTATTTTCATTAAAATAAAGAAACTCTA--------AATGAAAGTT-ATTCATT--------TTTATAAATGAAATAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 74167 69 + 100774 AAGGCCTCTATTTTCATTAAAATAAAGAAACTCTA--------AATGAAAGTT-ATTCATT--------TTTATAAATGAAATAAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 33372 69 - 218577 AATGCCTCTATTTTCATTAAAATAAAGAAACTCTA--------AATGAAAGTT-ATTCATT--------TTTATAAATGAAATAAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1412518 69 + 91010382 AATGCCTCCATTTTCATTAAAATAAAGAAACTCTA--------AATGACAGTT-ATTCATT--------TGTATAAATGAAATAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 70143 69 + 74206 AATGCCTCTATTTTCATTAAAATAAAGAAACTCTA--------AATGAAAGTT-ATTCATT--------TTTATAAATGAAATAAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 808798 69 - 1687011 AATACCTTTATTTTCATTAAAACCAAGAAACTCTA--------AATGAAAGTT-ATTCATT--------TTTATAAATGAAATAAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204167372 69 + 204313951 AATGCCTCTATTTTTATTAAAATAAAGAAACTCTA--------AATGAAATTG-ATTCATT--------TTTATAAACAAACTAAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16309185 69 + 16417988 AATGCCTCTATTTTCATTAAAATATAGAGACTCTA--------AGTGAAATTT-ATTCATT--------TTTATAAACAAACTAAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 97019 69 - 306014 AAGGCCTCTATTTTCATTAAAGTAAAGAGACTCTA--------AGTGAAATTT-ATTCATT--------TTTATAAACAAACTAAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 139877 69 - 211231 AATGCCTCTATTTTCATTAAAATAAAGAAACTCTA--------AATGAAATTT-ATTCATT--------TTTATAAACAAACTAAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2127689 66 - 2165740 AATGCCTCTATTTTCATTAGTATAAAGAAA--CTA--------AATGAAAGTT-CTTCATT--------TTTATAAA-GAAATAAA i otoGar3.GL873745 C 0 I 163 s mm10.chr13 74337305 68 + 120421639 A------CCACTTTAACAAAAAAGCAAACACTCCCACCCCCATACTGACACTC-A---ATT--------TTTATATAAGAAATTAA i mm10.chr13 C 0 C 0 s canFam3.chr34 11953426 58 + 42124431 AGTGTTTCCATTTTTATAAAAGGAA------------------ACTGAGACCC-A-ACTTC--------CCTACACAGAAATTAAA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 367598 75 - 913073 AACACCTCAATTCTTATTAGAATAA-GAAACTCTG--------AAATCAAGCG-TTTCACTGAATTCACTTTATAAA-GAAACAAA i dasNov3.JH577625 I 2350 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=1913337.000000 s hg38.chr3_KI270934v1_alt 126728 178 + 163458 GTAGAAATTAGATTCCTACCCTGTGGCAACAATAGTATTCTTTGCTCTTATGCGATGGATGGACCCGTCCTGTATGCACAGTGCGAAGACACC-ACGGCACTCCCCATTCTCCATCAGGAGATCCAAGGCAAAATACTCCACAAAACAGCTGGTATCATATCGCAGAGACTAAAAGAAA s gorGor5.CYUI01015759v1 19646 179 + 880730 GTAGAAATTAGATTCCTACCCTGTGGCAACAACAGTGTTCTTTGCTCTTCTGCGATGGATGGACCCATCCTGTATGCACAGTGCGATGACACCCACGGCACTCCCCGTTCTCCATCAGGAGATCCAAGGCAAAATACTCCACAAAACAGCTGGTATCATATCGCAGAGACTAAAAGAAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179850520 178 - 180051392 GTAGAAATTAGAGTCCTACCCTGTGGCAACAACAGTGTTCTTTGCTCTTATGCGATGGATGGACCCGTCCTCTATGCACAGTGCGATGACACC-ACGGCACTCCCCGTCCTCCATCAGGAGATCCAAGGCAAAATACTCCACAAAATAGCTGGTATCGTATCGCAGAGACTAAAAGAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1319172 178 + 181584905 GTAGAAATTAGAGTCCTACCCTGTGGCAACAACAGTGTTCTTTGCTCGTATGCGATGGATGGACCCGTCCTCTATGCACAGTGCGATGACACC-ACGGCACTCCCCGTCCTCCATCAGGAGATCCAAGGCAAAATACTCCACAAAATAGCTGGTATCGTATCGCAGGGACTAACAGAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 74236 178 + 100774 GTAGAAATTAGAGTCCTACCCTGTGGCAACAACAGTGTTCTTTGCTCGTATGCGATGGATGGACCCGTCCTCTATGCACAGTGCGATGACACC-ACGGCACTCCCCGTCCTCCATCAGGAGATCCAAGGCAAAATACTCCACAAAATAGCTGGTATCGTATCGCAGAGACTAAAAGAAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 33441 178 - 218577 GTAGAAATTAGAGTCCTACCCTGTGGCAACAACAGTGTTCTTTGCTCTTATGCGATGGATGGACCCGTCCTCTATGCACAGTGCGATGACACC-ACGGCACTCCCCGTCCTCCATCAGGAGATCTAAGGCAAAATACTCCACAAAATAGCTGGTATCGTATCGCAGAGACTAAAAGAAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1412587 178 + 91010382 GTAGAAATTAGAGTCCTACCCTGTGGCGACAACAGTGTTCTTTGCTCTTATGCGATGGACGGACCCGTCCTCTATGCACAGTGCGATGACACC-ACGGCACTCCCCATCCTCCATCAGGAGATCCAAGGCAAAATACTCCACAAAATAGCTGGTGTCATATCGCAGAGACTAAAAGAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 70212 177 + 74206 GTAG-AATTAGAGTCCTACCCTGTGGCAACAACAGTGTTCTTTGCTCTTAAGCGATGGACGGACCCGTCCTCTATGCACAGTGCGATGACACC-ACGGCACTCCCCGTCCTCCATCAGGAGATCCAAGGCAAAATACTCCACAAAATAGCTGGTATCGTATCGCAGAGACTAGAAGAAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 808867 178 - 1687011 GTAGAAATTAGAGTCCTACCCTGTGGCAACAACAGTGTTCTTTGCTCTTATGCGATGGATGGACCCGTCCTCTATGCACAGTGCGATGACACC-ACGGCACTCCCCGTTCTCCATCAGGAGATCCAAGGCAAAATACTCCACAAAATAGCTGGTATCATATCGCAGAGACTAAAAGAAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204167441 177 + 204313951 AT-AAAAGTTAATTCCTACCCTGTAGCAACAACAGTGTTCTTTGCTCTTATGCGATGTATGGACCCATCTTCTATGCACAGTGCAATCACACC-ACGGCACTCCCCATTCTCCATCAGGAGATCCAAGGCAAAATACTCCACAAAATAGCTGGTATCATATCGCAGAGACTAAAAGAAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16309254 178 + 16417988 ATCAAAATTCAATTCCTACCCTGTGGCAACAACAGTGTTCTTTGCTCTTATGCGATGGATGGACCCATCTTCTATGCACAGTGCAATCACACC-ACGGCACTCTTCATTCTCCATCAGGAGATCCAAGGCAAAATACTCCACAAAGTAGCTGGTATCGTATCGCAGAGACTAAAAGAAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 97088 178 - 306014 ATAAAAATTCAATTCCTACCCTGTGGCAACAACAGTGTTCTTTGCTCTTATGCGATGTATGGACCCATCTTCTATGCACAGTGCAATCACACC-ACGGCACTCTCCATTCTCCATCAGGAGATCCAAGGCAAAATACTCCACAAAATAGCTGGTATCATATCGCAGAGACTAAAAGAAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 139946 177 - 211231 AT-AAAAGTTAATTCCTACCCTGTGGCAACAACAGTGTTCTTTGCTCTTATGCGATGTATGGACCCATCTTCTATGCACAGTGCAATCACACC-ACGGCACTCCCCGTTCTCCATCAGGAGATCCAAGGCAAAATACTCCACAAAATAGCTGGTATCGTATCGCAGAGACTAAAAGAAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2127918 178 - 2165740 GAAAAAATTAGATTCCTACCCAGTAGCAACAACAGTATTCTTTGCTCTTATGCGATGTATGGACCCATCCTCTATGCACAGTGCAATAACACC-ACAACATTCCCCATTTTCCATCAGAAGATCCAAGGCAAAATACTCTACAAAATAGCTGGTATCATATCGCAGAGACTTAAAAAGA i otoGar3.GL873745 I 163 C 0 s mm10.chr13 74337373 176 + 120421639 --ATACAATAAAAGCCTACCCAGTAGCAATAACAGTGTTTTTTGCTCTTATTCGGTGTATGGACCCATCTTCTATGCACAGTGCAATGACACC-ACGGCACTCCCCATTTTCCATCAGAAGATCCAGTGCAAAATATTCCACAAAATAACTGGTGTCATATCGCAGAGACTGTAAGAAA i mm10.chr13 C 0 I 39 s canFam3.chr34 11953484 177 + 42124431 -TACAAGTTAGACTCCTACCCGGTAGCCACAACAGTGTTCTTGGCTCTTATGCGATGGATGGACCCATCTTCTATGCACAGTGCAATAACACC-ACGACATTCTCCATTTTCCATCAAGAGATCCAAGGCAAAGTACTCTACAAAATAGCTGGTATCATATCGCAGAGACTAAAAAAAC i canFam3.chr34 C 0 I 6 s dasNov3.JH577625 367673 167 - 913073 -----------GTTCCTACCCAGTAGCAACAACAGTGTTCTTTGCTCTTATGCGGTGTATGGACCCATCCTCTATGCACAGAGCGATAACACC-ACGGCATTCCCCATTTTCCATCAGAAGATCCAAGGCAAAATATTCCACAAAATAGCTGGTATCATATCTGAGAGACTGAAAAAAA i dasNov3.JH577625 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=11755.000000 s hg38.chr3_KI270934v1_alt 126906 6 + 163458 ---------GAAAAA s gorGor5.CYUI01015759v1 19825 6 + 880730 ---------GAAAAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179850698 6 - 180051392 ---------GGAAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1319350 6 + 181584905 ---------GGAAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 74414 6 + 100774 ---------GGAAAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 33619 6 - 218577 ---------GGAAAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1412765 6 + 91010382 ---------GGAAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 70389 6 + 74206 ---------GGAAAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 809045 6 - 1687011 ---------GGAAAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204167618 3 + 204313951 ---------GAA--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16309432 3 + 16417988 ---------GAA--- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 97266 6 - 306014 ---------GAAAAA i cebCap1.NW_016108150v1 C 0 I 68 s aotNan1.NW_018494784v1 140123 6 - 211231 ---------GAAAAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2128096 4 - 2165740 ---------AAAA-- i otoGar3.GL873745 C 0 I 1 s canFam3.chr34 11953667 6 + 42124431 ---------GAAAAA i canFam3.chr34 I 6 I 1 s dasNov3.JH577625 367840 12 - 913073 CCTACATCTCAA--- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74337549 39 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=4638.000000 s hg38.chr3_KI270934v1_alt 126912 1 + 163458 A s gorGor5.CYUI01015759v1 19831 1 + 880730 A i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179850704 1 - 180051392 A i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1319356 1 + 181584905 A i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 74420 1 + 100774 A i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 33625 1 - 218577 A i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1412771 1 + 91010382 C i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 70395 1 + 74206 A i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 809051 1 - 1687011 A i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204167621 1 + 204313951 A i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16309435 1 + 16417988 A i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 140129 1 - 211231 A i aotNan1.NW_018494784v1 C 0 I 68 s dasNov3.JH577625 367852 1 - 913073 A i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74337549 39 + 120421639 I e cebCap1.NW_016108150v1 97272 68 - 306014 I e canFam3.chr34 11953673 1 + 42124431 I e otoGar3.GL873745 2128100 1 - 2165740 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=304570.000000 s hg38.chr3_KI270934v1_alt 126913 71 + 163458 AAAGGGC------AAG-AAGTGTTAAGCCAACCTTTAAGGTTTTAAGGTGATAT----------CTGCTCATGTGAATAGGTGAAAGA s gorGor5.CYUI01015759v1 19832 70 + 880730 AA-GGGC------AAG-AAGTGTTAAGCCAACCTTTAAGGTTTTAAGGTGGTAT----------CTGCTCATGTGAACAGGTGAAACA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179850705 71 - 180051392 AAAGGGC------AGG-AAGTGTTAAGCCAAACTTTAAGGTTTTAAGGTGGTAT----------TTGCTCGTGTGAATAGGTGAAAGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1319357 71 + 181584905 AAAGGGC------AGG-AAGTGTTAAGCCAAACTTTAAGGTTTTAAGGTGGTAT----------TTGCTCGTGTGAATAGGTGAAAGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 74421 71 + 100774 AAAGGGC------AGG-AAGTGTTAAGCCAAACTTTAAGGTTTTAAGGTGGTAT----------TTGCTCGTGTGAATAGGTGAAAGA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 33626 71 - 218577 AAAGGGC------AGG-AAGTGTTAAGCCAACCTGTAAGGTTTTAAGGTGGTAT----------TTGCTCGTGTGAATAGGTGAAAGA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1412772 71 + 91010382 AAAGGGC------AGG-AAGTGTTAAGCCAACCTGTAAGGTTTTAAGGTGGTAT----------TTGCTCATGTGAATAGGTGAAAGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 70396 71 + 74206 AAAGGGC------AGG-AAGTGTTAAGCCAACCTGTAAGGTTTTAAGGTGGTAT----------TTGCTCGTGTGAATAGGTGAAAGA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 809052 68 - 1687011 AAAGGGC----------AAGTGTTAAGCCAACCTTTGAGGTTTTAAGGTGGTAT----------TTGCTCGTGTGAATAGGTGAAAGA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204167622 70 + 204313951 AAAGGGC------AAGTAAGTGTTAAGCCAGCTTTCCAGG-TTTAAGGTGATA-----------TTGTTCATGTGAATAGGCAAAAGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16309436 71 + 16417988 AAACGGC------AAGGAAGTGTTAAGCCAGCTTTCCAGGTTTTAAGATGACA-----------CTGTTCATGTGAACAGGCGAAAGA i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 2128101 59 - 2165740 AAAAAAC----------AAGAGTTAAACCAACATTTATAGTTATA-------------------TTGTTCATATGACCAGGTCAAAAA i otoGar3.GL873745 I 1 C 0 s canFam3.chr34 11953674 73 + 42124431 AAGGATC------CCA-CAGTTTCAATT--GCATTTAGGGTGTTAAACTGACATTTCAGCAATACTGCTCATGTGAACAGGC------ i canFam3.chr34 I 1 C 0 s dasNov3.JH577625 367853 68 - 913073 TAATTGCATTTAGAGT-AAGTATTAAAGCAACA--------TTTAACATGATA-----------GTGTTCACCTGCTTGAGTTAGAGA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74337549 39 + 120421639 I e aotNan1.NW_018494784v1 140130 68 - 211231 I e cebCap1.NW_016108150v1 97272 68 - 306014 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=141230.000000 s hg38.chr3_KI270934v1_alt 126984 32 + 163458 ACTTGAT------------C----------CA-----------AATGGACCAGGTAAATCCAAGG s gorGor5.CYUI01015759v1 19902 32 + 880730 ACTTGAT------------C----------CA-----------AATGGACCAGGTAAATCCAAGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179850776 32 - 180051392 ACCTGAT------------C----------CA-----------AATGGACCAGGTAAATCCAAGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1319428 32 + 181584905 ACCTGAT------------C----------CA-----------AATGGACCAGGTAAATCCAAGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 74492 32 + 100774 ACCTGAT------------C----------CA-----------AATGGACCAGGTAAATCCAAGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 33697 32 - 218577 ACCTGAT------------C----------CA-----------AATGGACCAGGTAAATCCAAGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1412843 32 + 91010382 ACCTGAT------------C----------CA-----------AATGGACCAGGTAAATCCAAGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 70467 32 + 74206 ACCTGAT------------C----------CA-----------AATGGACCAGGTAAATCCAAGG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 809120 32 - 1687011 ACCTGAT------------C----------CA-----------AATGGACCAGGTAAATCCAAGG i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 2128160 41 - 2165740 ACTTGATTCCATTCTGTTAT----------CA-----------AATGGACCAGGTAATTCCA--- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11953747 41 + 42124431 -CCTGAT------------CTGGTGTGTAACA-----------AATGGACTGTGTAAACCCTAGG i canFam3.chr34 C 0 I 151 s dasNov3.JH577625 367921 43 - 913073 ACTTGAC------------C----------TAATATGGTTAACAAAGGACTAGATAAATCCAGGG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74337549 39 + 120421639 I e aotNan1.NW_018494784v1 140130 68 - 211231 I e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=1018976.000000 s hg38.chr3_KI270934v1_alt 127016 319 + 163458 AGATC------------------AGCAACAGTGT------------CAATGACAC-TGTCAGAGCCC--------------GAGAGGCATTCC-ACGCCCAGCAGTACCAA-----------------------CAAGG--------------------C-AGGTGTGCTAGAGA-----ACGCAGCAG---CAACA---------GCTCCTATGTTGGTGACACATTTCCTACTTCTACACAACCCGAAGAGG--CACTCCACACTGTCCGG------------TGGCCGCATGCAGCTCCA-------CTCGGAGTCTGGTG--------------------------CCAGAG-TGAGATCCGCAGACCATGGGGTCACAGc------------ccagatggg-agctac-tggcaacacataaccacttaattaattaaaat------aagtca-----aaacgttcagctcttcag----ctacacctgccacattag s gorGor5.CYUI01015759v1 19934 321 + 880730 AGATC------------------AGCAACAGTGT------------CAGTGACAC-TGTCAGAGCCT--------------GAGAGGCATTCCCACGCCGAGCAGTACAAA-----------------------CAAGG--------------------C-AGGTGTGCTAGAGA-----ACGCAGCAG---CAACA---------GCTCCTACTTTGGTGACACATTTCCTACCTCTACACAACCCGAAGAGG--CACTCCACACTGTCCGG------------TGGCCACATGCAGCTCCA-------CTCGGAGTCTGGTG--------------------------CCAGAG-TGAGGTCCGCAGACCATGGGGTCACAGC------------CCAGATGGG-AACTACctggcaacacataaccatttaattaattaaaat------aagtca-----aaacgtttagctcttcag----ctacaccagccacattag i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179850808 318 - 180051392 AGATC------------------AGCAACAGAGT------------CAAGGACGC-TGTCAGCGAAC--------------GAGAGGCGTTCC-ACACCGCGCAGCACAGA-----------------------CAAGG--------------------C-AGGTGCGCTAGAGA-----ACGCAGCAG---CCACA---------GCTCCTACTTTGGTGACACATTTCCTATTTCTACACAACCCGAAGAGG--CACTCCACACTGTCTGG------------TGGCCACAGGCAGCTCCG-------CTCAGAGTTTGGTG--------------------------CCAGAG-TGAGGTCCACAGACCATGGGGTCACAGC------------CCAGGTGGG-AGCTGC-TGGCAACACACAACCACtaaattaattaaaat------aaatc------aaatgttcagctcttcag----ctacacctgccacattag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1319460 318 + 181584905 AGATC------------------AGCAACAGAGT------------CAAGGACGC-TGTCAGCGCCC--------------GAGAGGCGTTCC-ACACCGCGCAGCACAGA-----------------------CAAGG--------------------C-AGGTGCGCTAGAGA-----ACGCAGCAG---CCACA---------GCTCCTACTTTGGTGACACGTTTCCTATTTCTACACAACCCGAAGAGG--CACTCCACACTGTCTGG------------GGGCCACAGGCAGCTCCG-------CTCAGAGTTTGGTG--------------------------CCAGAG-TGAGGTCCACAGACCATGGGGTCACAGC------------CCAGGTGGG-AGCTGC-TGGCAACACACAACCACtaaattaattaaaat------aaatc------aaatgttcagctcttcag----ctacacctgccacattag i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 74524 318 + 100774 AGATC------------------AGCAACAGAGT------------CAAGGACGC-TGTCAGCGCCC--------------GAGAGGCGTTCC-ACACCGCGCAGCACAGA-----------------------CAAGG--------------------C-AGGTGCGCTAGAGA-----ACGCAGCAG---CAACA---------GCTCCTACTTTGGTGACACGTTTCCTATTTCTACACAACCCGAAGAGG--CACTCCACACCGTCTGG------------TGGCTGCAGGCAGCTCCG-------CTCAGAGTTTGGTG--------------------------CCAGAG-TGAGGTCCACAGACCATGGGGTCACAGC------------CCAGGTGGG-AGCTGC-TGGCAACACACAACCACtaaattaattaaaat------aaatc------aaacgttcagctcttcag----ctacacctgccacattag i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 33729 318 - 218577 AGGTC------------------AGCAACAGAGT------------CAAGGACGC-TGTCAGCGCCC--------------GAGAGGCGTTCC-ACACCGAGCAGCACAGA-----------------------CAAGG--------------------C-AGGTGCGCTAGAGA-----ACGCAGCAG---CAACA---------GCTCCTACTTTGGTGACTCATTTCCTATTTCTACACAACCCGAAGAGG--CACTCCACACTGTCTGG------------TGGCCACAGGCAGCTCCG-------CTCAGAGTTTGGTG--------------------------CCAGAG-TGAGGTCCACAGACCATGGGGTCACAGC------------CCAGGTGGG-AGCTGC-TGGCAACACACAACCACTAAATTAATTAAAAT------AAATC------AAACGTTCAGCTCTTCAG----CTACACCTGCCACATTAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1412875 318 + 91010382 AGATC------------------AGCAACAGAGT------------CAAGGACGC-TGTCAGCGCCC--------------GAGAGGCGTTCC-ACACCGAGCAGCACAGA-----------------------CAAGG--------------------C-AGGTGCGCTAGAGA-----ACGCAGCAG---CAACA---------GCTCCTACTTTGGTGACATGTTTCCTATTTCTACACAACCCGAAGAGG--CACTCCACACTGTCCGG------------TGGCCACAGGCAGCTCCG-------CTCAGAGTTTGGTG--------------------------CCAGAG-TGAGGTCCACAGACCATGGGGTCACAGC------------CCAGGGGGG-AGCTGC-TGGCAACACACAACCACtaaattaattaaaat------aaatc------aaacgttcagctcttcag----ctacacctgccacattag i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 70499 314 + 74206 AGATC------------------AGCAACAGAGT------------CAAGGACGC-TGTCAGCGCCC--------------GAGAGGTGTTCC-ACACCGAGCAGCACAGA-----------------------CAAGG--------------------C-AGGTGCGCTAGAGA-----ACGCAGCAG---CAACA---------GCTCCTACTTTGGTGACTCATTTCCTATTTCTACACAACCCGAAGAGG--CACTCCACACTGTCTGG------------TGGCCACAGGCAGCTCCG-------CTCAGAGTTTGGTG--------------------------CCAGAG-TGAGGTCCACAGACCATGGGGTCACAGC------------CCAGGTGGG-AGCTGC-TGGCAACACACAACCACTa----aattaaaat------aaatc------aaacgttcagctcttcag----ctacacctgccacattag i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 809152 317 - 1687011 AGATC------------------AGCAACAGAGT------------CAAGGACAC-TGTCAGAGCCC--------------GAGAGGCA-TCC-ACACCAAGCAGCACAAA-----------------------CAAGG--------------------C-AGGTGCACTAGAGA-----ACGCAGCAG---CAACA---------GCTCCTATTTTGGTGACACATTTCCTATTTCTACAGAACCCGAAGAGG--CACTCCACACTGTCTGG------------TGGCCGCATGCAGCTCTT-------CTCAGAGTTTGGTG--------------------------CCAGAG-TGAGGTCCACAGACCATGGGGTCACAGC------------CCAGGTggg-agctgc-tggcaacacataaccacttaattaattaaaat------aaatc------aaacattcagctcttcag----ctacacctgccacattag i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 2128201 348 - 2165740 CAACC------------------AGTAACAGTAT------------CAAGGGCCTATGCACAAGTGC--------------AAGAGTGCTCCC-ATGCTAAGTGGCACAAA-----------------------CAAGACATACCAAGTGCAAATGTGTC-AAGCATGCTAGAGAAAAGCATGCAGACG---GAGTATTTTTTATTACTCATATTTTAGTAATACAT---CTATTTCTC-----------------TATTCCAAACTGTCTTA------------TGGCTTCATGCAGCACTGAACTGCCCTCAGAGATTGGCA--------------------------CCAAAG-TGAGGCCTATGGACTGCACAGCCAtggc------------ccagatggg-agctgt-tggccacatataaccacttaattaatgaaaac------aattaatgaagagacatccacctctgcaa----tcacaccagtcacatctg i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 367964 432 - 913073 AGAACAGTGGAGTTTGAGAATGGAGCCACAGGATGTGACACACCCACAAGGGTGC-TGATGATGCGCAATGGCAGGAAAAAGAAAGGCATGAT-ATTTTCAGCAGTACCAAAATGCATAAAAAGAACACAAACCCATGG--------------------CGATGCATGCTGGAGATAAGAATAGAGCAGGTTTTGGA---------CCCTGTGTTCTGGCAAT-CATATCATATTTCC-TACAATTCAGAGGTGTTCGCTCAGCAGTGCTTGGCCTTGGGGTCTTTGGTGACAGG-----CTC-------CCCAGGGGCTGGCACATGGCACTGAAGTCCCCAACCAACTCCAGAGCCAAAGTCTGTGGACCATGGGGTCACAATTGGCCTGTGCTATCATGTAGGCAGCTGC-T--------------ACTTAAACAGTTAAAGTACAGTAAAATA------AAAC---CGACTCTCCAGGCCCTCACACCTGGAGGGCC-- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74337549 39 + 120421639 I e aotNan1.NW_018494784v1 140130 68 - 211231 I e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e canFam3.chr34 11953788 151 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=15510.000000 s hg38.chr3_KI270934v1_alt 127335 3 + 163458 caa s gorGor5.CYUI01015759v1 20255 3 + 880730 caa i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179851126 3 - 180051392 caa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1319778 3 + 181584905 caa i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 74842 3 + 100774 caa i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 34047 3 - 218577 CAA i cerAty1.NW_012004452v1 C 0 M 3065 s chlSab2.chr4 1413193 3 + 91010382 caa i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 70813 3 + 74206 caa i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 809469 3 - 1687011 caa i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 2128549 3 - 2165740 caa i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74337588 3 + 120421639 CAA i mm10.chr13 I 39 C 0 e aotNan1.NW_018494784v1 140130 68 - 211231 I e dasNov3.JH577625 368396 0 - 913073 C e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e canFam3.chr34 11953788 151 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=147607.000000 s hg38.chr3_KI270934v1_alt 127338 60 + 163458 cagccccatgtggctgg--cagctaccaaagcggacggttgcagacgagcaga-ttccggca--c s gorGor5.CYUI01015759v1 20258 62 + 880730 cagccccatgtggctgg--cagctaccaaagcagacggttgcagacgagcaga-ttccggcaacc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179851129 60 - 180051392 cagccacatgtggctgg--cagctcccaacgcggacggttgcagacaagcaga-ttccagca--c i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1319781 60 + 181584905 cagccacatgtggctgg--cagctcccaacgcggacggttgcagacaagcaga-ttccagca--c i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 74845 60 + 100774 cagccacatgtggctgg--cagctcccaacgcggacggttgcagacaagcaga-ttccagca--c i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1413196 60 + 91010382 cagccacatgtggctgg--cagctcccaacgcggacggttgcagacaagcaga-ttccagca--c i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 70816 60 + 74206 cagccacatgtggctgg--cagctcccaacgcggacggttgcagacaagcgga-ttccagca--c i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 809472 60 - 1687011 cagccacatgtggctgg--cagttcccAATGCGGATGGTTGCAGACAAGCAGA-TTCCAGCA--C i colAng1.NW_012116910v1 C 0 M 4505 s otoGar3.GL873745 2128552 60 - 2165740 tagtgccatgtggctgc--tggctatcaaagtggacag-tgcaaataagcacctttctacca--c i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74337591 61 + 120421639 CACCCCAGTATGGCCAGACTTGGGGCTGTAGTAGGCAG-TGCTGATAAGCCTA-TTTCCATA--C i mm10.chr13 C 0 I 1 s dasNov3.JH577625 368396 26 - 913073 TAGCCATGTGGGGCAGA--CAGCTGCCA------------------------------------- i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 140130 68 - 211231 I e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e canFam3.chr34 11953788 151 + 42124431 I e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=101759.000000 s hg38.chr3_KI270934v1_alt 127398 50 + 163458 cgcagaaaggtagg-cgccggacagcgct-gCCCG-CCTGGACCTGCC-G-TTCC s gorGor5.CYUI01015759v1 20320 51 + 880730 tgcagaaaggtagggcgccggacagcgct-gCCCT-CCTGGACCTGCC-G-TTCC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179851189 50 - 180051392 tgcagaaaggtagg-cactggacagcgct-gCCCG-CCTGGACCTGCT-G-TTCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1319841 50 + 181584905 tgcagaaaggtagg-cactggacagcgct-gCCCG-CCTGGACCTGCT-G-TTCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 74905 50 + 100774 tgcagaaaggtagg-cactggacatcgct-gCCCG-CCTGGACCTGCT-G-TTCC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1413256 50 + 91010382 tgcagaaaggtagg-cactggacagcgct-gCCCG-CCTGGACCTGCT-G-TTCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 70876 50 + 74206 tgcagaaaggtagg-cactggacagcgct-gCCCG-CCTGGACCTGCT-G-TTCC i manLeu1.NW_012101728v1 C 0 C 0 s otoGar3.GL873745 2128612 48 - 2165740 ----cacagaCCAG-CACTAGACAACATC-ACAAGACCAGGCTCTGTA-GCTCCC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74337653 52 + 120421639 CATAGTAGAGTCAG-CACTGGACAATGCT-ACCAGGGGTGGATTTGATAG-TCCT i mm10.chr13 I 1 C 0 s dasNov3.JH577625 368422 37 - 913073 ---------------CACTGGATAGTGCTGGTCAG-ACTGGGTCTGAC-G-GGCC i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 140130 68 - 211231 I e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e canFam3.chr34 11953788 151 + 42124431 I e colAng1.NW_012116910v1 809532 4505 - 1687011 M e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=479014.000000 s hg38.chr3_KI270934v1_alt 127448 201 + 163458 CTCAGCCAGCGCAAGTCGCTCTCGTGAG--CCTGGG-CCAGCTCCCCACATGACAGCTCCTGCTCCGGAAGGAGCCGCCGTCTCCTCCCACCACACACTTGTCGATGCACTCA-GCCACAGAGA--AGTCACTGGTGTTCTAACAACCTGCACATTACTGATCCGTCCCCATGCATCAGAAAACAACAAAGCTCAGAACATGGATTA s gorGor5.CYUI01015759v1 20371 202 + 880730 CTCAGCCAGCGCAAGTTGCTCTCATGAG--CCTGGGGCCAGCTCCCCACATGACAGCTCCTGCTCCGGACGGAGCCGCTGTCTCCTCCCACCACACACTTGTCGATGCACTCA-GCCACAGAGA--AGTCACTGGTGTTCTAACAACCTGCAAATTAATGATCCGTCCCCATTCATCAGAAAACAACAAAGTTCAGAACATTGATTA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179851239 201 - 180051392 CTCAGCCAGTGCAAGTTGCCCTCGTAAG--CCTGGG-CCAGCTCCCCACATGACAGCTCCTGCTCCGGACGGAGCTGCTTTCTCCTCCCACCACACACTCGTCCATGCACTCA-GCCACAGAGA--AGGCACTGGTGTTCTAACAACTTGCAAATTAATGGTCTGTCCCTATTCATCAGAAAACAACAAAGTTCAGAATACTGAATA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1319891 201 + 181584905 CTCAGCCAGTGCAAGTTGCCCTCGTAAG--CCTGGG-CCAGCTCCCCACATGACAGCTCCTGCTCCGGACGGAGCTGCTTTCTCCTCCCACCACACACTCGTCCATGCACTCA-GCCACAGAGA--AGGCACTGGTGTTCTAACAACTTGCAAATTAATGGTCTGTCCCTATTCATCAGAAAACAACAAAGTTCAGAATACTGAATA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 74955 201 + 100774 CTCAGCCAGTGCAAGTTGCCCTCGTAAG--CCTGGG-CCAGCTCCCCACATGACAGCTCCTGCTCCGGACGGAGCTGCTTTCTCCTCCCACCACACACTCGTCCATGCACTCA-GCCACAGAGA--AGGCACTGGTGTTCTAACAACTTGCAAATTAATGGTCTGTCCCTATTCATCAGAAAACAACAAAGTTCAGAATACTGAATA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1413306 201 + 91010382 CTCAGCCAGTGCGAGTTGCCCTCGTAAG--CCTGGG-CCAGTTCCCCACATGACAGCTCCTGCTCCAGACGGAGCTGCTTTCTCCTCCCACCACACACTCGTCCATGCACTCA-GCCACAGAGA--AGGCACTGGTGTTCTAACAACTTGCAAATTAATGGTCTGTCCCCATTCATCAGAAAACAACAAAGTTCAgaatactgaata i chlSab2.chr4 C 0 I 32 s manLeu1.NW_012101728v1 70926 201 + 74206 CTCAGCCAGTGCGAGTTGCCCTCGTTAG--CCTGGG-CCAGCTCCCCACATGACAGCTCCTGCTCCGGACGGAGCTGCTTTCTCCTCCCACCACACACTCGTCCATGTACTCA-GCCACAGAGA--AGGCACTGGTGTTCTAACAACTTGCAAATTAATGGTCTATCTCCATTCATCAGAAAACAACAAAGTTCAGAATACTGAATA i manLeu1.NW_012101728v1 C 0 C 0 s otoGar3.GL873745 2128660 178 - 2165740 CTGGGCCAATGCAAGTGGCTCTCATAAG--CCTGG--CCAACTTCCCATATGACAGCTCCTGTGACGGATGA---------CAGGTCCCTTAAGACATTTAGCAAGACACT------------A--AGGCATTGACATCCTAAC-ACTTGCAAATTAATGATCTGCCCCCATT-ATCTGAAAACAACAGAGTTCAGAATATTGATTA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74337705 180 + 120421639 GATGGTTAATACAAGGAACTCTAAAGAG--CATAGG-CAAACTCTCAACACAAC---------CACAGAATAAG-------CACAGACTGTCATATTTTTTTCAGTGTACTCA-GCCTAAAGGA--ACCTACTGGTGCTCTAAT-ATTTTCATGTTAACCAGCTGTCACTAC-CTTCTGAA---GACAGAGCTCAGATTATTGATTA i mm10.chr13 C 0 I 240 s canFam3.chr34 11953939 172 + 42124431 CTCAGTGAACACAAAGGACCCTCATGAA--ACTG---CCAGCTCCCCATGTGACACACAATTCCACAGGGTGGG-------CAGATCCTGTCACATATCTGTCGATGCACGCA-GCC--AGAGA--AGCGACTCCTGTCCTAAC-ATTCGCTAATCAATAAT---------------GGAAATCA--AGAGTTCAGAATACTGATTA i canFam3.chr34 I 151 C 0 s dasNov3.JH577625 368459 189 - 913073 CTCTTTTAGC-CAAGGGCCTTTCCTGGGGTGCTGGG-CCAGTTCCACACATGCACACAACCTCCCTGGAGGCAG----------GTCCTGGCACACACCTGTCAAAGCACTCCTGGCACGGAAGCCAGTCACGGGCATCCTGAC-ACTTGTAAATTAAGGAAATGCACCCATTTATTGGAAAACG--AGAGTT-AGAATAGTAAC-- i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 140130 68 - 211231 I e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e colAng1.NW_012116910v1 809532 4505 - 1687011 M e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=277972.000000 s hg38.chr3_KI270934v1_alt 127649 105 + 163458 CTCTGAATCAATACTGTTCAGGATATTGTTTGGTCATGCCAAAGTTGACCCTGATTACCCAGTAACTATTGTCACCTCAAGTCTTTGTCCAGTGATAACAGTTAA s gorGor5.CYUI01015759v1 20573 105 + 880730 CTCTGAATCAATACTGTTCAGAATATTATTTGCTCATGCCAAAGCGGACCCTGATTACACAGTAACTACTGTCACCTCAAGTCTTTGTCCGGTGGTAACAGTTAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179851440 105 - 180051392 CTCTGAATCAATACTGTTCAGAATATTATTTGGCCATGCCAAAGTTGACCTTGATTACCCAGTAACTATTGTCACCTCAAGTCTTTGTCCAGTGATAACAATTAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1320092 105 + 181584905 CTCTGAATCAATACTGTTCAGAATATTATTTGGCCATGCCAAAGTTGACCTTGATTACCCAGTAACTATTGTCACCTCAAGTCTTTGTCCAGTGATAACAATTAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 75156 105 + 100774 CTCTGAATCAATACTGTTCAGAATATTATTTGGCCATGCCAAAGTTGACCTTGATTACCCAGTAACTATTGTCACCTCAAGTCTTTGTCCAGTGATAACAATTAA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1413539 105 + 91010382 ctCTGAATCAATACTGTTCAGAATATTATTTGGTCATGCCAAAGTTGACCTTGATTACCCAGTAACTATTGTCACCTCAAGTCTTTGTCCAGTGATAACAATTAA i chlSab2.chr4 I 32 C 0 s manLeu1.NW_012101728v1 71127 105 + 74206 CTCTGAATCAATACTGTTCAGAATATTATTTGGCCATGCCAAAGTTGACCTTGATTACCCAGTAACTATTGTCACCTCAAGTCTTTGTCCAGTGATAACAATTAA i manLeu1.NW_012101728v1 C 0 C 0 s otoGar3.GL873745 2128838 104 - 2165740 TTCTGAATCAATACTGTTCAGAATATTATTTGTCCATGCTAAAATTGGTTCTGATCATCCAGCGATTACTGTC-TTTCAAGTCTCTGTCTGGTTTTAATAGTTAA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11954111 76 + 42124431 ----------------------------TTTGGCTACGCCAAAGTAGGCCCTGAGTATCCAGTAAGTACTGTC-CCCCAAGTGTTAGTCCAGTCTAAACAGTTAA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 368648 71 - 913073 -------------------------------ATCCACGCCAAAGTTGGC--TGATTGCCCAGTGACGACTGCT-CCACAAGACCTATTCCAGTTTTAAAAGCTAA i dasNov3.JH577625 C 0 I 14 e mm10.chr13 74337885 240 + 120421639 I e aotNan1.NW_018494784v1 140130 68 - 211231 I e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e colAng1.NW_012116910v1 809532 4505 - 1687011 M e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=12634.000000 s hg38.chr3_KI270934v1_alt 127754 8 + 163458 T-ATGAAAA s gorGor5.CYUI01015759v1 20678 8 + 880730 T-ATTAAAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179851545 8 - 180051392 T-ATTAAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1320197 8 + 181584905 T-ATTAAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 75261 8 + 100774 A-ATTAAAA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1413644 8 + 91010382 T-ATTAAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 71232 8 + 74206 A-ATTAAAA i manLeu1.NW_012101728v1 C 0 C 0 s otoGar3.GL873745 2128942 9 - 2165740 TAATCAAGA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11954187 9 + 42124431 GGATTAAAA i canFam3.chr34 C 0 C 0 e mm10.chr13 74337885 240 + 120421639 I e aotNan1.NW_018494784v1 140130 68 - 211231 I e dasNov3.JH577625 368719 14 - 913073 I e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e colAng1.NW_012116910v1 809532 4505 - 1687011 M e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=12327.000000 s hg38.chr3_KI270934v1_alt 127762 5 + 163458 CAATC s gorGor5.CYUI01015759v1 20686 5 + 880730 CAATC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179851553 5 - 180051392 CAATC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1320205 5 + 181584905 CAATC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 75269 5 + 100774 CAATC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1413652 5 + 91010382 CAATC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 71240 5 + 74206 CAATC i manLeu1.NW_012101728v1 C 0 C 0 s otoGar3.GL873745 2128951 5 - 2165740 TAATC i otoGar3.GL873745 C 0 I 43 e mm10.chr13 74337885 240 + 120421639 I e aotNan1.NW_018494784v1 140130 68 - 211231 I e dasNov3.JH577625 368719 14 - 913073 I e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e canFam3.chr34 11954196 0 + 42124431 C e colAng1.NW_012116910v1 809532 4505 - 1687011 M e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=144953.000000 s hg38.chr3_KI270934v1_alt 127767 79 + 163458 CATggccgggtgtggtggctcacacctgtaatcccagcactttgggaggccgaggcaggtggactgcctgagctcagga s gorGor5.CYUI01015759v1 20691 79 + 880730 CATggccgggtgtggtggctcacgcctgtaatcccagcactttaggaggccgaggcgggtggactgcctgagctcagga i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179851558 79 - 180051392 CATggctgggtgtggtggctcacacctctaatcctcgcactttgggaggccgaggcgggtagactgcctgagctcagga i rheMac8.chr6 C 0 I 207 s macFas5.chr6 1320210 79 + 181584905 CATggctgggtgtggtggctcacacctctaatcctcgcactttgggaggccgaggcgggtagactgcctgagctcagga i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 75274 79 + 100774 CATggctgggtgtggtggctcacacctctaatcctcgcactttgggaggccgaggcgggtagactgcctgagctcagga i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1413657 79 + 91010382 CATggctgggggtggtggctcatgcctctaatccccgcactttgggaggctgaggcgggtggactgcctgagctcagga i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 71245 79 + 74206 CATggctgggtgtggtggctcacacctctaatcctcgcactttgggaggccgaggccggtagactgcctgagctcagga i manLeu1.NW_012101728v1 C 0 C 0 e mm10.chr13 74337885 240 + 120421639 I e aotNan1.NW_018494784v1 140130 68 - 211231 I e dasNov3.JH577625 368719 14 - 913073 I e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e canFam3.chr34 11954196 0 + 42124431 C e otoGar3.GL873745 2128956 43 - 2165740 I e colAng1.NW_012116910v1 809532 4505 - 1687011 M e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=106411.000000 s hg38.chr3_KI270934v1_alt 127846 84 + 163458 gttcgggagcagcctgggcaacatgggaaaccctgtctctactaaaatacaaaacatcagcaaggcgtgg-cggcgtgcacctgt s gorGor5.CYUI01015759v1 20770 85 + 880730 gttcgggagcagcctgggcaacatgggaaaccctgtctctactaaaatacaaaaaatcagcaaggcgtgggtggcgtgcacctgt i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 1320289 84 + 181584905 gttcgggaccagcctgggcaacatgggaaactctgtctctactaaaatacaaaaaattagccaggcatgg-tggcgtgcacttat i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 75353 84 + 100774 gttcgggaccagcctgggcaacatgggaaaccctgtctctactaaaatacaaaaaattagccaggcatgg-tggcgtgcactttt i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1413736 84 + 91010382 gttcgggaccagcctgggcaacatgggaaaccctgtctctactaaaatacaaaaaattagccaggcatgg-tggcgtgcacctgt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 71324 84 + 74206 gttcgggaccagcctgggcaacatgggaaaccctgtctctactaaaatacaaaaaatttgccaggcatgg-tggcgtgcacttat i manLeu1.NW_012101728v1 C 0 C 0 e mm10.chr13 74337885 240 + 120421639 I e aotNan1.NW_018494784v1 140130 68 - 211231 I e dasNov3.JH577625 368719 14 - 913073 I e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e canFam3.chr34 11954196 0 + 42124431 C e otoGar3.GL873745 2128956 43 - 2165740 I e colAng1.NW_012116910v1 809532 4505 - 1687011 M e cerAty1.NW_012004452v1 34050 3065 - 218577 M e rheMac8.chr6 179851637 207 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=231021.000000 s hg38.chr3_KI270934v1_alt 127930 139 + 163458 agtcccagctactctggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagcagagatcgcgccactgcactccagcctgggtga--g-agt--gagactccgtctcaaaaa-----caaagcaaaacaaaa s gorGor5.CYUI01015759v1 20855 140 + 880730 agtcccagctactctggaggctgaggcaggagaatcgcttgaacccgg-aggcagaggttgcagtgagcagagatcgcgccactgcactccagcctgggtgacag-agt--gagactccgtctgaaaaa-----caaagcaaaacaaaa i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 1320373 145 + 181584905 agtcccagctactcaggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagcagagattgcaccactgcactccagcctg-gtgacag-agt--gagagtccgtctcaaaaacaaagcaaagcaaaacaaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 75437 147 + 100774 agtcccagctactcaggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagcagagattgcaccactgcactccagcctg-gtgacag-agtgagagagtccgtctcaaaaacaaagcaaagcaaaacaaaa i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1413820 142 + 91010382 agtcccagctactcaggaggctgaggcaggagaatcgcttgaacctaggtggctgaggttgcagtgagcagagattgcgccattgcactccagcctgcgtgacaagagt--gagactccgtctcaaaaa-----caaagcaaaacaaaa i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 71408 145 + 74206 agtcccagctactcaggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagcagagattgcaccactgcactccagcctg-gtgacac-agt--gagactccgtctcaaaaacaaagcaaagcaaaacaaaa i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 814038 142 - 1687011 AGtcccagctactcaggaggctgaggcaggagaattgcttgaacccaggtggctgaggttgcagtgagcagagattgcgccattgcactccagcctgcatgacaagagt--gacactccatctcaaaaa-----caaagcaaaacaaaa i colAng1.NW_012116910v1 M 4505 C 0 e mm10.chr13 74337885 240 + 120421639 I e aotNan1.NW_018494784v1 140130 68 - 211231 I e dasNov3.JH577625 368719 14 - 913073 I e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e canFam3.chr34 11954196 0 + 42124431 C e otoGar3.GL873745 2128956 43 - 2165740 I e cerAty1.NW_012004452v1 34050 3065 - 218577 M e rheMac8.chr6 179851637 207 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=10642.000000 s hg38.chr3_KI270934v1_alt 128069 9 + 163458 caaa-----caaaC s gorGor5.CYUI01015759v1 20995 11 + 880730 caaa---aacaaaC i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 1320518 14 + 181584905 caaaacaaacaaac i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 75584 14 + 100774 caaaacaaacaaac i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1413962 14 + 91010382 caaaacaaacaaac i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 71553 14 + 74206 caaaacaaacaaac i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 814180 10 - 1687011 ca----aaacaaac i colAng1.NW_012116910v1 C 0 C 0 s mm10.chr13 74338125 9 + 120421639 -----CAAGATAAA i mm10.chr13 I 240 C 0 e aotNan1.NW_018494784v1 140130 68 - 211231 I e dasNov3.JH577625 368719 14 - 913073 I e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e canFam3.chr34 11954196 0 + 42124431 C e otoGar3.GL873745 2128956 43 - 2165740 I e cerAty1.NW_012004452v1 34050 3065 - 218577 M e rheMac8.chr6 179851637 207 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=113211.000000 s hg38.chr3_KI270934v1_alt 128078 47 + 163458 CAAACCAATCCATTCAGGAACTCAGA-GG--TGGTAAAAGAGCCTTAAAA s gorGor5.CYUI01015759v1 21006 48 + 880730 AAAACCAATCCATTCAGGAACTCAGACGG--TGGTAAAAGAGCCTTAAAA i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 1320532 49 + 181584905 aaaacCAATCCATTCAGGAACTCAGA-GGTTTGGTAAAAGAGCCTTAAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 75598 47 + 100774 aaaacCAATCCATTCAGGAACTCAGA-GG--TGGTAAAAGAGCCTTAAAA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1413976 47 + 91010382 aaaacCAACCCATTCAGGAACTCAGA-GG--TGGTAAAACAGCCTTAAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 71567 47 + 74206 aaaacCAATCCATTCAGGAACTCAGA-GG--TGGTAAAAGAGCCTTAAAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 814190 47 - 1687011 aaaacCAACCCATTCAGGAACTCAGA-GG--TGGTAAAACAGCCTTAAAA i colAng1.NW_012116910v1 C 0 C 0 s mm10.chr13 74338134 47 + 120421639 TACATCAATCAGTTCAGTAACTTAGA-GG--TGATAAAAGCACATTAATA i mm10.chr13 C 0 C 0 s canFam3.chr34 11954196 43 + 42124431 CAAATCAATCAGTTCAGGAACTCAGA-GG--TACT----GAGTCATAAAA i canFam3.chr34 C 0 C 0 e aotNan1.NW_018494784v1 140130 68 - 211231 I e dasNov3.JH577625 368719 14 - 913073 I e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e otoGar3.GL873745 2128956 43 - 2165740 I e cerAty1.NW_012004452v1 34050 3065 - 218577 M e rheMac8.chr6 179851637 207 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=3665.000000 s hg38.chr3_KI270934v1_alt 128125 5 + 163458 TACtt--- s gorGor5.CYUI01015759v1 21054 5 + 880730 TACTT--- i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 1320581 5 + 181584905 TGCtt--- i macFas5.chr6 C 0 I 2 s macNem1.NW_012013899v1 75645 5 + 100774 TGCtt--- i macNem1.NW_012013899v1 C 0 I 324 s chlSab2.chr4 1414023 3 + 91010382 TAC----- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 71614 5 + 74206 TGCtt--- i manLeu1.NW_012101728v1 C 0 M 2258 s colAng1.NW_012116910v1 814237 5 - 1687011 TACtt--- i colAng1.NW_012116910v1 C 0 C 0 s mm10.chr13 74338181 8 + 120421639 Tacttagt i mm10.chr13 C 0 C 0 e aotNan1.NW_018494784v1 140130 68 - 211231 I e dasNov3.JH577625 368719 14 - 913073 I e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e canFam3.chr34 11954239 0 + 42124431 C e otoGar3.GL873745 2128956 43 - 2165740 I e cerAty1.NW_012004452v1 34050 3065 - 218577 M e rheMac8.chr6 179851637 207 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=3555.000000 s hg38.chr3_KI270934v1_alt 128130 7 + 163458 gttcttt s gorGor5.CYUI01015759v1 21059 7 + 880730 GCTGttt i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 1320588 7 + 181584905 tttcttt i macFas5.chr6 I 2 C 0 s chlSab2.chr4 1414026 6 + 91010382 -ttcttt i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 814242 2 - 1687011 -----tt i colAng1.NW_012116910v1 C 0 C 0 s mm10.chr13 74338189 7 + 120421639 gctcttt i mm10.chr13 C 0 I 216 e aotNan1.NW_018494784v1 140130 68 - 211231 I e dasNov3.JH577625 368719 14 - 913073 I e macNem1.NW_012013899v1 75650 324 + 100774 I e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e canFam3.chr34 11954239 0 + 42124431 C e otoGar3.GL873745 2128956 43 - 2165740 I e manLeu1.NW_012101728v1 71619 2258 + 74206 M e cerAty1.NW_012004452v1 34050 3065 - 218577 M e rheMac8.chr6 179851637 207 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=1599.000000 s hg38.chr3_KI270934v1_alt 128137 3 + 163458 gtc s gorGor5.CYUI01015759v1 21066 3 + 880730 gtc i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 1320595 3 + 181584905 ttc i macFas5.chr6 C 0 I 311 s chlSab2.chr4 1414032 3 + 91010382 ttc i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 814244 3 - 1687011 ttc i colAng1.NW_012116910v1 C 0 C 0 e mm10.chr13 74338196 216 + 120421639 I e aotNan1.NW_018494784v1 140130 68 - 211231 I e dasNov3.JH577625 368719 14 - 913073 I e macNem1.NW_012013899v1 75650 324 + 100774 I e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e canFam3.chr34 11954239 0 + 42124431 C e otoGar3.GL873745 2128956 43 - 2165740 I e manLeu1.NW_012101728v1 71619 2258 + 74206 M e cerAty1.NW_012004452v1 34050 3065 - 218577 M e rheMac8.chr6 179851637 207 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=155304.000000 s hg38.chr3_KI270934v1_alt 128140 89 + 163458 tttttttgagaca-ggtctcctgttgctcaggctggagtgcagtggtatgaacatggctcactgt-------------------ctcaagtgatcctcctgcctcagcc s gorGor5.CYUI01015759v1 21069 89 + 880730 tttttttgagaca-ggtctcctgttgcccaggctggagtgcagtggtatgaacatggctcactgt-------------------ctcaagtgatcctcctgcctcagcc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179851844 107 - 180051392 tttttttgagacagggtctcctgttgcccaggctggagtgcagtggtatgaacatggctcattgtagcctcaacc--tcctggtctcaagtgatcctcccacctcagcc i rheMac8.chr6 I 207 C 0 s macFas5.chr6 1320909 107 + 181584905 tttttttgagacagggtctcctgttgcccaggctggagtgcagtggtatgaacatggctcattgtagcctcaacc--tcctggtctcaagtgatcctcccacctcagcc i macFas5.chr6 I 311 C 0 s macNem1.NW_012013899v1 75974 107 + 100774 tttttttgagacagggtctcctgttgcccaggctggagtgcagtgctatgaacatggctcattgtagcctcaacc--tcctggtctcaagtgatcctcccacctcagcc i macNem1.NW_012013899v1 I 324 C 0 s chlSab2.chr4 1414035 105 + 91010382 tttttttgagaca-ggtctcctgttgcccaggctggagtgcagtggtatgaacatggctcactgt---ttcaagtgatcctggtctcaagtgatcctcctgcctcagcc i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 814247 101 - 1687011 attttttgagaca-ggtctcctgttgcccaggctggagtgcagtggtatgaacatggct-------gtctcaagtgatcctggtctcaagtgatcctcctgcctcagcc i colAng1.NW_012116910v1 C 0 C 0 e mm10.chr13 74338196 216 + 120421639 I e aotNan1.NW_018494784v1 140130 68 - 211231 I e dasNov3.JH577625 368719 14 - 913073 I e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e canFam3.chr34 11954239 0 + 42124431 C e otoGar3.GL873745 2128956 43 - 2165740 I e manLeu1.NW_012101728v1 71619 2258 + 74206 M e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 180607 20 - 190779 I e panTro5.chr3 2593372 20 - 202621043 I a score=471196.000000 s hg38.chr3_KI270934v1_alt 128229 177 + 163458 tcctgagtaactgggattacaagcatgtaccaccatgctcagctactttttaaactttctgtagagacagggtctcactatgttctccagactggtctcaaacttctggtctcaagtgatcctcctgccttggcctcctaaagtgctgggattacagacgtgggccactgtgcctgg s panTro5.chr3 2593392 177 - 202621043 tcctgagtaactggaattacaagcatgtaccaccatgctcagctactttttaaactttttgtagagacagggtctcgctatgttctccagactggtctcaaacttctggtatcaagtgatcctcctgccttggcctcctaaagtgctgggattacagacgtgggccactgtgcctgg i panTro5.chr3 I 20 C 0 s panPan2.chrUn_NW_014024201v1 180627 177 - 190779 tcctgagtaactggaattacaagcatgtaccaccatgctcagctactttttaaactttttgtagagacagggtctcgctatgttctccagactggtctcaaacttctggtatcaagtgatcctcctgccttggcctcctaaagtgctgggattacagacgtgggccactgtgcctgg i panPan2.chrUn_NW_014024201v1 I 20 C 0 s gorGor5.CYUI01015759v1 21158 177 + 880730 tcctgagtaactgggattacaagcatgtaccaccatgctcagctactttttaaactttttgtagagacagggtctcgctatgttctccagactggtctcaaacttctggtctcaagtgatcctcctgccttggcctcctaaagtgctgggattacagacatgggccactgtgcctgg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179851951 144 - 180051392 tcc----taactgggattacaagcatgtaccaccatgcccagctaatttttaaactttttgtagagacagggtctcgctatgttgtccaggctggtctcaaacttctggtctcaagtgatcctcct-ccttggcctccT----------------------------CTGTGCCTGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1321016 144 + 181584905 tcc----taactgggattacaagcatgtaccaccatgcccagctaatttttaaactttttgtagagacagggtcttgctatgttgtccaggctggtctcaaacttctggtctcaagtgatcctcct-ccttggcctccT----------------------------CTGTGCCTGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 76081 144 + 100774 tcc----taactgggattacaagcatgtaccaccatgcccagctaatttttaaactttttgtagagacagggtctcgctatgttgtccaggctggtctcaaacttctggtctcaagtgatcctcct-ccttggcctccT----------------------------CTGTGCCTGG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1414140 177 + 91010382 tcctgagtaactgggattacaagcatgtaccaccatgcccagctaatttttaaactttctgtagagacagggtctctctatattgtccaggctggtctcaaacctctggtctcaagtgatcctcctgccgtggcctcctaaagtgctgggattacagatgtgagccactgtgcctgg i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 814348 177 - 1687011 tcctgagtaactgggattacaagcatgtaccaccatgcccagctaatttttaaactttttgtagagacagggtctcgctatgttgtccaggctggtctcaaacctctggtctcaagtgatcctcctgccttggcctcctaaagtgctgggattacagatgtgagccactgtgcctgg i colAng1.NW_012116910v1 C 0 C 0 e mm10.chr13 74338196 216 + 120421639 I e aotNan1.NW_018494784v1 140130 68 - 211231 I e dasNov3.JH577625 368719 14 - 913073 I e saiBol1.JH378155 16309507 0 + 16417988 C e calJac3.chr2 204167692 0 + 204313951 C e cebCap1.NW_016108150v1 97272 68 - 306014 I e canFam3.chr34 11954239 0 + 42124431 C e otoGar3.GL873745 2128956 43 - 2165740 I e manLeu1.NW_012101728v1 71619 2258 + 74206 M e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=15600.000000 s hg38.chr3_KI270934v1_alt 128406 2 + 163458 cc s panTro5.chr3 2593569 2 - 202621043 cc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 180804 2 - 190779 cc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 21335 2 + 880730 cc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179852095 2 - 180051392 CC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1321160 2 + 181584905 CC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 76225 2 + 100774 CC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1414317 2 + 91010382 cc i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 814525 2 - 1687011 cc i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204167692 2 + 204313951 CC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16309507 2 + 16417988 CC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 97340 2 - 306014 CC i cebCap1.NW_016108150v1 I 68 C 0 s aotNan1.NW_018494784v1 140198 2 - 211231 CC i aotNan1.NW_018494784v1 I 68 C 0 e mm10.chr13 74338196 216 + 120421639 I e dasNov3.JH577625 368719 14 - 913073 I e canFam3.chr34 11954239 0 + 42124431 C e otoGar3.GL873745 2128956 43 - 2165740 I e manLeu1.NW_012101728v1 71619 2258 + 74206 M e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=15312.000000 s hg38.chr3_KI270934v1_alt 128408 2 + 163458 TG s panTro5.chr3 2593571 2 - 202621043 TG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 180806 2 - 190779 TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 21337 2 + 880730 TG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179852097 2 - 180051392 TG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1321162 2 + 181584905 TG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 76227 2 + 100774 TG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1414319 2 + 91010382 TG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 814527 2 - 1687011 TG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204167694 2 + 204313951 TG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16309509 2 + 16417988 TG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 97342 2 - 306014 TG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 140200 2 - 211231 TG i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74338412 2 + 120421639 TA i mm10.chr13 I 216 C 0 s canFam3.chr34 11954239 2 + 42124431 TA i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 368719 14 - 913073 I e otoGar3.GL873745 2128956 43 - 2165740 I e manLeu1.NW_012101728v1 71619 2258 + 74206 M e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=12000.000000 s hg38.chr3_KI270934v1_alt 128410 1 + 163458 C s panTro5.chr3 2593573 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 180808 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 21339 1 + 880730 C i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179852099 1 - 180051392 C i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1321164 1 + 181584905 C i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 76229 1 + 100774 C i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1414321 1 + 91010382 C i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 814529 1 - 1687011 C i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204167696 1 + 204313951 C i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16309511 1 + 16417988 C i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 97344 1 - 306014 C i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 140202 1 - 211231 C i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2128999 1 - 2165740 C i otoGar3.GL873745 I 43 C 0 s mm10.chr13 74338414 1 + 120421639 C i mm10.chr13 C 0 C 0 s canFam3.chr34 11954241 1 + 42124431 C i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 368719 14 - 913073 I e manLeu1.NW_012101728v1 71619 2258 + 74206 M e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1145070.000000 s hg38.chr3_KI270934v1_alt 128411 195 + 163458 TTGCTCTGTTCTT-ACATGCTGAGTGTCACATATCCCAAG-TGAAAACCTGGTATATAA-GATTATCAATTCAACTTCCCAACATAGAGGCAACAACTCACACATTGCCTT-AGGGGCAGCTTCTCAAGGCAC----AC----GCCTGCTCCTGTCACATCCACAGTCGCTGCATGTGCCCCACACGGCTGTTCTCTGTTGCTTTTT s panTro5.chr3 2593574 195 - 202621043 TTGCTCTGTTCTT-ACATGCTGAGTGTCACATATCCCAAG-TGAAAACCTGGTATATAA-GATTATCAATTCAACTTTCCAACATAGAGGCAGCAACTCACACATTGCCTT-AGGGGCAGCTTCTCAAGGCAC----AT----GTCTGCTCCTGTCACATCCACAGTCGCTGCATGTGCCCCACACGGCTGTTCTCTGTTGCCTTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 180809 199 - 190779 TTGCTCTGTTCTT-ACATGCTGAGTGTCACATATCCCAAG-TGAAAACCTGGTATATAA-GATTATCAATTCAACTTTCCAACATAGAGGCAGCAACTCACACATTGCCTT-AGGGGCAGCTTCTCAAGGCAC----ACAGGGGATAGGTCCTGTCACATCCACAGTCGCTGCATGTGCCCCACACGGCTGTTCTCTGTTGCCTTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 21340 194 + 880730 TTGTTCTGTTCTT-ACATGCTGAGTGTCACATACGCCAAG-TGAAAACCT-GTATATAA-GATTATCAATTCAACTTTCCAACATAGAGGCAACAACTCACACATTGCCTT-AGGGGCAGCTTCTCAAGGCAC----AC----GTCTGCTCCTGTCACATCCACAGTCGCTGCATGTGCCCCACACCGCTGTTCTCTGTTGCTTTTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179852100 196 - 180051392 TTGCTCGGTTCTG-ACATGTTGAGTGTCACATACCCCAAGTTAAAAATCTGGTATATAA-GATTATCAATTCAACTTTCCAAAATAGATACAAGAAATAACATATTGCCTT-AGGGACAGCTTCTCACAGCAC----AT----GCCTGGTCCTTTCACATCAACAGTCGCTGCATGTGTCCTACACCGTTGTTCTCTGTTGCTTTTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1321165 196 + 181584905 TTGCTCGGTTCTG-ACATGTTGAGTGTCACATACCCCAAGTTAAAAATCTGGTATATAA-GATTATCAATTCAACTTTCCAAAATAGATACAAGAAATAACATATTGCCTT-AGGGACAGCTTCTCACAGCAC----AT----GCCTGGTCCTTTCACATCAACAGTCGCTGCATGTGTCCTACACCGTTGTTCTCTGTTGCTTTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 76230 196 + 100774 TTGCTCGGTTCTG-ACATGTTGAGTGTCACATACCCCAAGTTAAAAATCTGGTATATAA-GATTATCAATTCAACTTTCCAAAATAGATACAAGAAATAACATATTGCCTT-AGGGACAGCTTCTTACAGCAC----AT----GCCTGGTCCTTTCACATCAACAGTCGCTGCATGTGTCCTACACCGTTGTTCTCTGTTGCTTTTT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1414322 193 + 91010382 TTGCTCTGTTCTA-ATATTTTGAGCATCACATATCCCAAGTTAAAAACCTAGCATATAA-GATTATCAATTCAACTTTCCAAAATAGATA-AAGAAATAACATATTGCCTT-AGGGACAGCTTCTCACAGCAC----AT----GCCTGGTCCTTTCACATCAACAGTCGCTGCA--TGTCCTACACCGTTGTTCTCTGTTGCTTTTT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 814530 193 - 1687011 TTGCTCTGTTCTT-ATATTTTGAGTATCACATACCCCACGTTAAAAACCTGGTATATAA-GATTATCAGTTCAACTTTCC-AAATGGATACAAGAAATAACATGTTGCCTT-AGGGACAGCTTCTCACAGCAC----GT----GCCTGGTCCTTCCACATCGACAGTCGCTGCATGTGTCCTACACCGTTGT--TCTGTTGCTTTTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204167697 189 + 204313951 TTGTTCTGTCCT----ATGCTGAATGTCACATATTCCAAG-TTAGAACCTGGTATATAA-GATTATCAATTCAACTTTCCAAAACAGATACAAGAAATAACGTATTGCCTT-AGGGACAGCTCCTGACAGCAC----------GCCTGGTACTCTCACATCAATAA-CCCCGCGCATGTCTTACACAGTTGTTCTCTGTTGCTTTTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16309512 190 + 16417988 TTGTTCTGTTCT----ATGCTGAATGTCACATATCCCAGG-TTAGAACCTGGTACGTAA-GATTATCAATTCAACTTTCCAAAATAGATACAAGAAATTACATATTGCCTT-AGGGACAGCTTCCCACAGCAC----------GCCTGGTGCTTTCACATCAACAATCCCTGCACATGTCTTACACAGTTGTTCTCTGTTGCTTTTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 97345 190 - 306014 TTGTTCTGTTCT----ATGCTGAGTGTCACATATCCCAAG-TTAGAACCTGGTATATAA-GATTATCAATTCAACTTTCCAAAATAGATACAAGAAATTACATATTGCCTT-AGGAACAGCTTCTCACAGCAC----------GCCTGGTGCTTTCACATCAATAGTCCCTGCACACGTCTTACACAGTTGTTCTCTGTTGCTTTTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 140203 190 - 211231 TTGTTCTGTTCC----ACGCCGAATGTCACAGGTCCCAAG-TTAGAACCCGGTAGATAA-GATCATCAATTCAACTTTCCAAAAGAGATACAAGAAGTAACATATTGCCTC-AGGGACAGCTTCTCACAGCAC----------GCCTGGTGCTCTCACATCCACAGTCCCTGCACATGTCCTACACAGTCGTTCTCTGTTGCTTTTT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2129000 146 - 2165740 TTGCTCTGTTCTT-TCATCTTGAGTGTGACAGATCCCAAC-CTCAAACCCGGCATTTAATGACTATCAATTCAACTTTCCAAAATAGAACCAAGAATAAACATATCGCCTTAAGAGAGAGTTATTCACAGCAT----------------------------------------------------------CTCTTTAATACTTTG- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74338415 182 + 120421639 TTTCTCTGTTCTTGGCATGTTATGCAGCACAAATTCAAAA---------TAGTAAGAAATGATTACCAACTCAACTTTCCAATACAGACATAAGGAGTAACATACTGACTT-AGAGACAGCTT-TCACAATAT----GT----GTTCAATACTTTCAGATTAATAATTATTTCAGGTATCTTACT------ATCtgtgttaattttt i mm10.chr13 C 0 I 440 s canFam3.chr34 11954242 182 + 42124431 TTTTTCTGTTCTT-ACACTTGCAGTGCAGCAGATCACCG--TCCAAACACGGTATA-AC-GATTATCAATTTAATTTTCTAAAATAGGCACTTCTAAATTCATAATGACT--ACACACATCTTACCAAGTTACTGTGAC----CCCAGAGGCGGACACATTGACATT---TTGACCTGTCC----CCAGGGTGGCCTGTT------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 368733 145 - 913073 TTGCTCTCATCTT-ATACTTTCAGTATGACTAATCGTAAGATTCAAACATGCTACATAATGAATATCAATCTAATTTTCCAAAATGGATAAAAGAAACAAAATGCTGCTTT-TAAGACAGCTTTT-----CAC---------------------TCATATTAATAATTAAGGT---------------------------------- i dasNov3.JH577625 I 14 C 0 e manLeu1.NW_012101728v1 71619 2258 + 74206 M e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=467988.000000 s hg38.chr3_KI270934v1_alt 128606 96 + 163458 ACGCAATCTCTGGCTGACTCACTGGGCACGCTAACCCATTCCCCGCTGTCACCACAAGCCCCAGCACTATGTGTCCTGTC-TCAGGTGGAC-GGGGGG s panTro5.chr3 2593769 96 - 202621043 ACGCAATCTCTGGCTGACTCACTGGGCACGCTAACCCATTCCCCGCTGTCACCACAAGCCCCAGCACTACGTGTCCTGTC-TCAGGTGGAC-GTAGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 181008 96 - 190779 ACGCAATCTCTGGCTGACTCACTGGGCACGCTAACCCATTCCTCGCTGTCACCACAAGCCCCAGCACTACGTGTCCTGTC-TCAGGTGGAC-GTAGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 21534 97 + 880730 GCGTAATCTCTGGCTGACTCACTGGGCACGCTAACCCATTCCCCGCTGTCACCATAAGCCCCAGCACTACGTGTCCTGTC-TCAGGTGGACGGGGGGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179852296 96 - 180051392 ACATAATCTCTGGCGGACTCACTGGGCACGCTAACCCATTCCCCGCTGTCACCATAACCCCCAGCACTACATGTCCTGTC-TCAGCTGGAC-CAGGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1321361 96 + 181584905 ACATAATCTCTGGCGGACTCACTGGGCACGCTAACCCATTCCCCGCTGTCACCATAAGCCCCAGCACTACATGTCCTGTC-TCAGCTGGAC-CGGGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 76426 96 + 100774 ACATAATCTCTGGCGGACTCACTGGGCACGTTAACCCATTCCCCACTGTCACCATAAGCCCCAGCACTACATGTCCTGTC-TCAGCTGGAC-CGGGGG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1414515 96 + 91010382 ACATAATCTCTGGCGGACTCACTGGGCACGCTAACCCATTCCCCGCTGTCACCATAAGCCCCAGCACTACATGTCCTGTC-TCAGCTGGAC-CGGGGG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 814723 88 - 1687011 ACATCATCTCTGGCGGGCTCACTGGGC----TAACCCAT--CCCACTGTCACCGTAAGCCCCAGCACTACATGTCCTGTC-TCAG-TGGAC-C-GGGG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204167886 96 + 204313951 ACATAATCTCTGGCTGACTCACTGGGCACGCTAACCCATTCCCCGTTGTCACCATAAGCCCTGGCACTACGGGTCCTATC-TCAGATGCAC-TGGAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16309702 95 + 16417988 ACATAATCTTT-GCCGACTCACTGGGCACACTAACCCATTCCCCATTGTCACCATAAGCCCCAGCACTACGGGTCCTGTC-TCAGGTGCAG-TGGAGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 97535 96 - 306014 ACATAATCTCTGGCTGACTCACTGGGCACGCTAACCCATTCCCCATTGTCACCATAAGCCCCAGCACTACGGGTCCTGTC-TCAGGTGCAG-TGGAGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 140393 95 - 211231 ACATAATCTCTGGCTGACTCACTGGGCACGCTAACCC-TTCCCCGTCGCCACCATAAGCCCCAGCACTATGCGCCCTGTC-TCAGGTGCGC-TGGAGG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2129146 14 - 2165740 -----------------------------------------------------------------------------------ATATGCAT-CCGAAA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11954424 63 + 42124431 --------TCCAACTTA-TCACCGCGCG-------------CCTGTCCTAACCAGA------------GTGTGTCCTGTCACCCTGTGCAC-CCAGGG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 368878 49 - 913073 ACACTTCCTGAGTCGGGCCCACGGG---------------CCCCATCATGAACAT--GCACCAACG-------------------------------- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74338597 440 + 120421639 I e manLeu1.NW_012101728v1 71619 2258 + 74206 M e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1881224.000000 s hg38.chr3_KI270934v1_alt 128702 164 + 163458 CAGCCTTACC-CTCCCATATAAGGTGTGCAATATTGAGTGGCCGGTCCGATCAGCCACACAGCAGCACCGATGGGCCTGCCTGCCCTTTCCAAACTTGAGGCTGTGTCCGCCAAATGCACGCTGATAAATCTTCCCATCTTCAGTTCTGCTAAACGGCATGCCAT s panTro5.chr3 2593865 164 - 202621043 CGGCCTTACC-CTCCCATATGAGGTGTGCAATATTGAGTGGCCGGTCCGATCAGCCACACAGCAGCACCGATGGGCCTGCCCGCCCTTTCCAAACTTGAGGCTCTGTCTGCCAAATGCACGCTGATAAATCTTCCCATCTTCAGTTCTGCTAAACGGCATGCCAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 181104 164 - 190779 CGGCCTTACC-CTCCCATATGAGGTGTGCAATATTGAGTGGCCGGTCCGATCAGCCACACAGCAGCACCGATGGGCCTGCCCGCCCTTTCCAAACTTGAGGCTCTGTCTGCCAAATGCACGCTGATAAATCTTCCCATCTTCAGTTCTGCTAAACGGCATGCCAT i panPan2.chrUn_NW_014024201v1 C 0 M 641 s gorGor5.CYUI01015759v1 21631 165 + 880730 CGGCCTTACCTCTCCCATATCAGGTGTGCAATATTGAGTGGCCGGTCCGATCAGCCACACAGCAGCATCGATGGGCCTGCCCACCCTTTCCAAACTTGAGGCTCTGTCCGCCAAATGCACGCTGATAAATCTTCCCATCTTCAGTTCGGCTAAACGGCATGCCAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179852392 164 - 180051392 CAGCCTTACC-CTTCCATATAAGGTGTGCAATAGTGAGTGGCCGGTCCGATCAGCCACACAGCAGCACCGATGGGCCTGCCCGCCCTTTCCAAACTTGAGGCTCTGTCCACCAAATGCACGCTGATAAATCTTCCCATCTTCAGTTCTGCTAAACGGCATGCCGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1321457 164 + 181584905 CGGCCTTACC-CTTCCATATAAGGTGTGCAATAGTGAGTGGCCGGTCCGATCAGCCACACAGCAGCACCGATGGGCCTGCCCGCCCTTTCCAAACTTGAGGCTCTGTCCACCAAATGCACGCTGATAAATCTTCCCATCTTCAGTTCTGCTAAACGGCATGCCGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 76522 164 + 100774 CGGCCTTACC-CTTCCATATAAGGTGTGCAATAGTGAGTGGCCGGTCCGATCAGCCACACAGCAGCACCGATGGGCCTGCCCGCCCTTTCCAAACTTGAGGCTCTGTCCACCAAATGCACGCTGATAAATCTTCCCATCTTCAGTTCTGCTAAACGGCATGCCGT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1414611 164 + 91010382 CGGCCTTACC-CTTCCATATAAGGTGTGCAATAGTGAGGGGCCAGTCTGATCAGCCACATAGCAGCACCGATGGGCCTGCCCGCCCTTTCCAAACTTGAGGCTCTGTCCACCAAATGCACGCTGATAAATCTTCCCATCTTCAGTTCTGCTAAATGGCATGCCGT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 814811 164 - 1687011 CAGTCTTACC-CTTCCATATAAGGTGTGCAATAGTGAGTGGCCGGTCCGATCAGCCACACAGCAGCACCGATGGGCCTGCCCGCCCTTTCCAAACTTGAGGCTCTGTCCACCAAATGCACGCTGATAAATCTTCCCATCTTCAGTTCTGCTAAACGGCATGCCGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204167982 164 + 204313951 CGGCCTTACC-CTTCCATATAAGGTGTGCAGTAGCGAGTGGCCAGTCCGATCAGCCACGCAGCAGCACCGATGGGCCTGCCCGCCCTTTCCAAACTTGAGGCTCTGTCCACCAAACGCACGCTGATAAATCTTCCCATCTTGGGTTCTGCTAAACGGCATGCCAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16309797 164 + 16417988 CGGCCTTACC-CTTCCATACAAGGTGTGCAATAGCGAGTGGCCTGTCCGATCAGCCACACAGCAGCACCGATGGGCCTGCCCGCCCTTTCCAAACTTGAGGCTCTGTCCACCAAACGCACGCTGATAAATCTTCCCATCTTGGGTTCTGCTAAACGGCATGCCAT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 97631 164 - 306014 CGGCCTCACC-CTTCCATACAAGGTGTGCAGTAGCGAGTGGCCGGTCCGGTCAGCCACACAGCAGCACCGATGGGCCTGCCCGCCCTTTCCAAACTTGAGGCTCTGTCCACCAAACGCACGCTGATAAATCTTCCCATCTTGGGTTCTGCTAAACGGCATGCCAT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 140488 164 - 211231 CGGCCTTACC-CTTCCATATAAGGTGTGCAGTAGCGAGTGGCCGGTCCGATCGGCCACACAGCAGCAGCGATGGGCCTGCCCGCCCTTTCCAAACTTGAGGCTCTGTCCACCAAACGCACGCTGATAAATCTTCCCATCCTGGGTTCTGCTAAACGGCATGCCAT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2129160 164 - 2165740 TGGCCTTACC-CTTCCATACAAGGTGTGCAACAGTGAGTGCCCAGTCCGATCAGCCACACAGCAGCACCGATGGGCCTGCCCGCCTTTTCCAAATTTGAGGCTCTGTCCACCAAATGCACGCTGATAAATCCTCCCATCTTGAGTTCTGCTAAAGGGCATACCAT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74339037 164 + 120421639 CAGCCTTACT-CTTCCATACAACGTGTGTAAGAGTGAGTGGCCTGTCCGATCAGCCACACAGCAACACCGATGAGCCTGCCCGCCTTTCCCAAACTTGAGGCTCTGTCCACCAAATGCACGCTGATAAATCTTCCCATCTTCAGTTCTGCTAAATGGCATACCAT i mm10.chr13 I 440 C 0 s canFam3.chr34 11954487 164 + 42124431 TGGCCTCACC-CTTCCATACAACGTGTGCAGCAGCGAGTGGCCAGTGCGGTCAGCCACACAGCAGCACCGATGGGCCTGCCCGCCTTTCCCAAACTTGAGGCTCTGTCCACCAAAAGCACGCTGATAGATCCTTCCATCTTCAGTTCTGCTAAATGGCATGCCAT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 368927 164 - 913073 CCGCCTCACC-CTTCCATACAGGGTGTGTAACAGGGAGTGGCCAGTCCGGTCAGCCACGCAACAGCACCGATGGGCCTGCCCTCCTTTCCCAAACTTGAGGCTCTGCCCACCAAACGCTCGCTGATAAATCTTCCCATCTTCAGTTCTGCTAAATGGCATGCCAA i dasNov3.JH577625 C 0 C 0 e manLeu1.NW_012101728v1 71619 2258 + 74206 M e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=393346.000000 s hg38.chr3_KI270934v1_alt 128866 57 + 163458 AATTTTCTACCTGTGAAAGATAAAAACAAACAAAAGCCTTATTACCCTAAAGGAGTC s panTro5.chr3 2594029 57 - 202621043 AATTTTCTACCTGTGAAAGATAAAAACAAACAAAAGCCTTATTACCCTAAAGGAGTC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 21796 57 + 880730 ACTTTTCTACCTGTGAAAGATAAAACCAAACAAAAGCCTTATTACCTTAAAGGAGTC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179852556 57 - 180051392 AATTTTCCAGCTGTGAAAGATAAAAACAAACAAAAACCTTATTACCTTAAAGGAGTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1321621 57 + 181584905 AATTTTCCAGCTGTGAAAGATAAAAACAAACAAAAACCTTATTACCTTAAAGGAGTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 76686 57 + 100774 AATTTTCCAGCTGTGAAAGATAAAAACAAACAAAAACCTTATTACCTTAAAGGAGTC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1414775 57 + 91010382 AATTTTCCAGCTGTGAAAGATAAAAACAAACAAAAACCTTATTACCTTAAAGGAGTC i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 814975 57 - 1687011 ACTTTTCCAGCTGTGAAAGATAAAAACAAACAAAAACCTTATTACCTTAAAGGAGTC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204168146 46 + 204313951 AATTTTCTAGCTGTGAA----------ACATAAAAA-CGTATTACCTTAAAGCAGTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16309961 56 + 16417988 AATTTTCTAGCTGTGAAAGACAAAAACAAACAAAAA-CATATTACCTTAAAGGAGTC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 97795 56 - 306014 AATTTTCTAGCTGTGAAAGATAAAAACAAACAAAAA-TGTATTACCTTAAAGGAGTC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 140652 56 - 211231 AATTTTCTAGCTGTGAAAGATAAAAACAAACAAAAA-CGTATTACCTTAAAGAAGTC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2129324 52 - 2165740 AATTTTCTAGCTGTGAA--ACAAAATAAAACAAAAA-TTTATTACCTTAAAGGAG-- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74339201 55 + 120421639 AATTTTCTAGCTGTGAAACACAAAA-CAAGCAAAAA-TATATTATCTTAAACAAGTA i mm10.chr13 C 0 I 6 s canFam3.chr34 11954651 52 + 42124431 AATTCTCCAGCTGTGAAATACAAAAACAAACA-----CCTAGCACCTGGAAGGAATC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 369091 48 - 913073 AGTTTTCTAGCTGTGAA----ACAAACAAACAAAAC---TATTAT-TCAATGGAGC- i dasNov3.JH577625 C 0 C 0 e manLeu1.NW_012101728v1 71619 2258 + 74206 M e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 181268 641 - 190779 M a score=103957.000000 s hg38.chr3_KI270934v1_alt 128923 20 + 163458 AAGATATTCACAGCTAATCT s panTro5.chr3 2594086 20 - 202621043 AAGATATTCACAGCTAATCT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 21853 20 + 880730 AAGATATTCACAGCTAATCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179852613 20 - 180051392 AAGATATTCATAGCTCATCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1321678 20 + 181584905 AAGATATTCATAGCTCATCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 76743 20 + 100774 AAGATATTCATAGCTCATCT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1414832 20 + 91010382 AAGATATTCATAGCTCATCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 73957 20 + 74206 aaGATATTCATAGCTCATCT i manLeu1.NW_012101728v1 M 2258 C 0 s colAng1.NW_012116910v1 815032 20 - 1687011 AAGATATTCATAGCTCCCCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204168192 18 + 204313951 ACGATATTCACAGCTAAC-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16310017 13 + 16417988 AAGATATTGACAG------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 97851 18 - 306014 AAGATATTCAAAGCTAAT-- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 140708 18 - 211231 AAGATATTCACAGCTAAC-- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2129376 17 - 2165740 ---ATATTCATGGCTAAttt i otoGar3.GL873745 C 0 I 275 s mm10.chr13 74339262 11 + 120421639 AAAACAAACAA--------- i mm10.chr13 I 6 C 0 s canFam3.chr34 11954703 20 + 42124431 AAGACTTTCATGGCGACTTT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 369139 20 - 913073 AAGAGATGTGTGGCTAATTT i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 181268 641 - 190779 M a score=258254.000000 s hg38.chr3_KI270934v1_alt 128943 34 + 163458 ACACTAAA---CAACTTTA-ATACAAATCTGC---AAACCC s panTro5.chr3 2594106 34 - 202621043 ACACTAAA---CAACTTTA-ATACAAATCTGC---AAACCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 21873 35 + 880730 ACACTAAA---CAACCTTA-GTACAAATCTGCA--AAACCC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179852633 34 - 180051392 ACACTGAA---CAACTTTA-ACACAAATCTGC---AAACCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1321698 34 + 181584905 ACACTGAA---CAACTTTA-ACACAAATCTGC---AAACCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 76763 34 + 100774 ACACTGAA---CAACTTTA-ACACAAATCTGC---AAACCC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1414852 34 + 91010382 ACACTGAA---CAACTTTA-ACACAAATCTGC---AAACCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 73977 34 + 74206 ACACTGAA---CAACTTTA-ACACAAATCTGC---AAACCC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 815052 34 - 1687011 ACACTGAA---CAACTTTA-ACACAAATCTGC---AAACCC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204168210 31 + 204313951 ---CTAAA---CAGCTTTC-ACACAAACCTGC---AAACCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16310030 32 + 16417988 ---CTAAA---CAACTTTTAACACAAATCTGC---AAACCC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 97869 31 - 306014 ---CTAAA---CAACTTTA-ACACAAATCTGT---AAACCC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 140726 31 - 211231 ---CTAAG---CAACTTTA-ACACAAATCTGC---AAACCC i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74339273 40 + 120421639 ACAAAAAACCTCATTTTTG-TACCAAATTTGCACCAAACCC i mm10.chr13 C 0 I 15 s canFam3.chr34 11954723 33 + 42124431 ACAGT-AA---CAATTTCA-ACATAAGCCTGC---GAACCC i canFam3.chr34 C 0 I 1 s dasNov3.JH577625 369159 34 - 913073 ACACTGAA---CAACTTTA-ACACAGACTTGC---AAACCC i dasNov3.JH577625 C 0 I 1 e otoGar3.GL873745 2129393 275 - 2165740 I e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 181268 641 - 190779 M a score=1181241.000000 s hg38.chr3_KI270934v1_alt 128977 186 + 163458 AAATTAACCTATTTT------ATGAAAATGTCAACACTTCATCAAAGAGAAG-TTTTTCTTATTACATGTAATACATAGTTCATGATGGACAAAGACTTCTCTTGTGAGCTTTGCTAATCAC--------------------------------------CA----TTCTTTCGGCT-GCCACATCT------GCCTCAACTGCTTACA-TTTTTTCCAGGACTCTTGT----------ACTGGAAAC--AGACC s panTro5.chr3 2594140 183 - 202621043 AAATTAACCTATTTT------ATGAAAAT---AACACTTCATCAAAGAGAAG-TTTTTCTTATTACATGTAATACATACTTCATGACGGACAAAGACTTCTCTTGTGAGCTTTGCTAATCAC--------------------------------------CA----TTCTTTCGGCT-GCCACATCT------GCCTCAATTGCTTACA-TTTTTTCCAGGACTCTTGT----------ACTAGAAAC--AGACC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 21908 187 + 880730 AAAGTAACCTATTTT------ATGAAAATGTCAACACTTCATCAAAGAGAAG-TTTTTCTTATTACATGTAATACATAGTTCATGACGGACAAAGTCTTCTCCTGTGAGCTTTGCTAATCAC--------------------------------------CA----TTCTTTCGGCT-GCCACATCT------GCCTCAATTGCTTACATTTTTTTCCAGGACTCTTGT----------ACTAGAAAC--AGACC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179852667 188 - 180051392 AAAGTAACCTATTTT------ATGAAAATGTCAACACTTCATCAAAGAGAAG--TCTTCTTGTTACGTGTAATGCACAGTTCGTGACGGAAAAAGACTCCTCTTGTGAGCTTTGCTCATCAC--------------------------------------CA----TTCTTTCGGCCGGCCACATCT------GGCTCAATTGCTTACA-TGCTTTCCAGGACTCTTTTTG--------ACTAGAAAC--AGACC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1321732 188 + 181584905 AAAGTAACCTATTTT------ATGAAAATGTCAACACTTCATCAAAGAGAAG--TCTTCTTGTTACGTGTAATGCACAGTTCGTGACGGAAAAAGACTCCTCTTGTGAGCTTTGCTCATCAC--------------------------------------CA----TTCTTTCGGCCGGCCACATCT------GCCTCAATTGCTTACA-TGCTTTCCAGGACTCTTTTTG--------ACTAGAAAC--AGACC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 76797 188 + 100774 AAAGTAACCTATTTT------ATGAAAATGTCAACACTTCATCAAAGAGAAG--TCTTCTTGTTACGTGTAATGCACAGTTCGTGACGGAAAAAGACTCCTCTTGTGAGCTTTGCTCATCAC--------------------------------------CA----TTCTTTCGGCCGGCCACATCT------GCCTCAATTGCTTACA-TGCTTTCCAGGACTCTTTTTG--------ACTAGAAAC--AGACC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1414886 188 + 91010382 AAAGTAACCTATTTT------ATGAAAATGTCAACACTTCATCAAAGAGAAG--TCTTCTTGTTACGTGTAATGCACAGTTCGTGATGGAAAAAGACTCCTCTTGTGAGCTTTGCTCATCAC--------------------------------------CA----TTCTTTCGGCCGGCCACATCT------GCCTCAATTGCTTACA-TTCTTTCCAGTACTCTTTTTG--------GCTAGAAAC--AGGCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 74011 188 + 74206 AAAGTAACCTATTTT------ATGAAAATGTCAACACTTCATCAAAGAGAAG--TCTTCTTGTTACGTGTAATGCACAGTTCGTGACGGAAAAAGACTCCTCTTCTGAGCTTTGCTCATCAC--------------------------------------CA----TTCTTTCGGCCGGCCACATCT------GCCTCAATTGCTTACA-TGCTTTCCAGGACTCTTTTTG--------ACTAGAAAC--AGACC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 815086 187 - 1687011 AAAGTAACCTACTTT------ATGAAAATGTTAACA---CATCAAAGAGAAG--TCTTCTTGTTACGTGTAATGCATAGTTCGTGATGGAAAAAGACTCCTCTTGTGAGCTTTGCTCATCAC--------------------------------------CC----TTCTTTCGGCCGGCCACATCT------GCCTCAATTGCTTACA-TCCTTTCCAGGACCCTTTTTG--------ACCAGAAACAGAGACC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204168241 184 + 204313951 AAAGTCATGTATTTT------ATGAAAATCTCAACCCTTCATCAGAG---AG--TTTTCCTGTTACATGTACTGCATCGCTCATGACGGAAAAAGA-TTCTCTTGTGAGCTTGACTCATCAC--------------------------------------TG----TTCTTTTGGCTGGCCACATCT------GCCTCAATCTCTTACA-TTTTCTCCAGGACTCTTTTGT--------ACTCGAAAC--AGACC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16310062 186 + 16417988 AAAGTCATGTATTTT------TTGAAAATCTCAACCCTTCATCAAAGAGAAG--TTTTCTTGTTACATGTAATGCATCATTCATGATGGAAAAAG--TTCTCTTGTGAGCTTCGCTCATCAC--------------------------------------CG----TTCTTTCGGCTAGCCAGATCT------GCCTCAATCGCTTACA-TTTTTTCCAGGACTCTTTTGT--------TCTAGAAAC--AGACC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 97900 172 - 306014 AAAGTCATGTATTTT------TTGAAAATCTCAACCCTTCATCGAAGAGAAG--TTTTCTTGTTACAGGTAATGCATCATA----------------TTCTCTTGCGAGCTTTGCTTATCAC--------------------------------------CG----TTCTTTGGGCTGGCCATATCT------GCCTCAATCTCTTACA-TTTTTTCCAGGACTCTTTTGT--------ACTAGAAAC--AGACC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 140757 186 - 211231 AAAGTCATGTATTTT------ATGAAAATCTCAACGCTTCATCAAAAAG-AG--TTTTCTTGTCACATGTACTGCGTCGTTCACGATGGAAAAAGA-TTCTCTTGTGAGCTTCGCTCGTCAC--------------------------------------CG----TTCTTTCGACTGGCCACATCT------GCCTCAATCTCTTACA-TGTTTTCCAGGACTCTTTTGT--------ACTAGAAAC--AGACC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2129668 191 - 2165740 AAAGTAGTATGTTCT------ACGAAAATATTGACATTTC-----AGAAAAG--TTTCCTTATTAAATGTACGAGATAGTTAATGACAGAAAAAGATTTCTCTTGTTAGCTGAGCTCATTAC--------------------------------------CA----TTCTTTCAATTAGTCATATCT------GCCTCAATCTCTTAAA-CTTTTTCTAGGACTCCTTTTGTATTCAATATCAGAAAC--AGACA i otoGar3.GL873745 I 275 C 0 s mm10.chr13 74339328 215 + 120421639 ATACTAGCATATTCT------ATGAAAACACTGATAATTCCGGGAGAATAAA--CTATCTTCTTAAATGAACTGAATAGTT----ACAGGAAAA-ACTTTCCTCATTGGCTCA--TCATTACCAGGGATGGGACCCTAGAGCTCAATTGCAGTAGGCATGCA----TTCTCCAGG--AGCCTTATC--------CCCAGCCCGTTTTTA-TTTTTACACTGATTCTTTTGT--------AATACAAGC--AGAGC i mm10.chr13 I 15 C 0 s canFam3.chr34 11954757 169 + 42124431 AAACCAATATGTCCT------ATAAAAATCTCAACACTTCAGAAAAGAGAAAAACTTTGTCATTAAATGAACTGAATGGTTGACAATAGAAAGGG--TCTCCCTGTTGCACCCTCTCAT-AC--------------------------------------CC----TTCTTTGGGCTGACCACATCT------GCCTCAA-------AA-C-----------CTCTCTTGT--------GTCAGAAAC--AGACC i canFam3.chr34 I 1 C 0 s dasNov3.JH577625 369194 176 - 913073 AAACTGATATATTCTGTTTACATGAAAATGTTGACACTTTAGAAGAGAGGAAGATTTCCTTGTTAAATGAACTGAAC---TGACACTAGAAAAAAA--TTTCTTGTTA--------CATCAT--------------------------------------TATGATTTTTTTTGCCTGATCAAATCTAGGACAGCCTTAAT---------TTTTATCTAGGACTTTTT-----------A--AAAAAT--T---- i dasNov3.JH577625 I 1 C 0 e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 181268 641 - 190779 M a score=12636.000000 s hg38.chr3_KI270934v1_alt 129163 2 + 163458 AC s panTro5.chr3 2594323 2 - 202621043 AC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 181909 2 - 190779 AC i panPan2.chrUn_NW_014024201v1 M 641 C 0 s gorGor5.CYUI01015759v1 22095 2 + 880730 AC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179852855 2 - 180051392 AC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1321920 2 + 181584905 AC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 76985 2 + 100774 AT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1415074 2 + 91010382 AC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 74199 2 + 74206 AC i manLeu1.NW_012101728v1 C 0 N 0 s colAng1.NW_012116910v1 815273 2 - 1687011 AC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204168425 2 + 204313951 AC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16310248 2 + 16417988 AC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 98072 2 - 306014 AC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 140943 2 - 211231 AC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2129859 2 - 2165740 TC i otoGar3.GL873745 C 0 I 1 s mm10.chr13 74339543 2 + 120421639 AC i mm10.chr13 C 0 C 0 s canFam3.chr34 11954926 2 + 42124431 AT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 369370 1 - 913073 A- i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=2216099.000000 s hg38.chr3_KI270934v1_alt 129165 184 + 163458 CAGAGCAC-CCAGAGCCTCCCGCCCATCACCTCGACCATGGCAGTGGGGGCCTGCTCCGTCACGTAGTGGATGGCATCCTGGTCCCCCAGCCAGTCGGAGCCCTTCACGGTGTCATAGAAATGCCACCTCCAGTTGTCCTCCTCCATGTTCCCCAGAGCAGCATTGATTCCAACCTG----GAAACACC s panTro5.chr3 2594325 184 - 202621043 CAGAGCAC-CCAGAGCCTCCCGCCCATCACCTCGACCATGGCAGTGGGGGCCTGCTCCGTCACGTAGTGGATGGCATCCTGGTCCCCCAGCCAGTCGGAGCCCTTCACGGTGTCGTAGAAATGCCACCTCCAGTTGTCCTCCTCCATGTTCCCCAGAGCAGCATTGATTCCTCCCTG----GAAACACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 181911 184 - 190779 CAGAGCAC-CCAGAGCCTCCCGCCCATCACCTCGACCATGGCAGTGGGGGCCTGCTCCGTCACGTAGTGGATGGCATCCTGGTCCCCCAGCCAGTCGGAGACCTTCACGGTGTCGTAGAAATGCCACCTCCAGTTGTCCCCCTCCATGTTCCCCAGAGCAGCATTGATTCCAACCTG----GAAACACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 22097 184 + 880730 GAGAGCAC-CCAGAGCCTCCCGCCCATCACCTCGACCATGGCAGTGGGGGCCTGCTCCATCACGTAGTGGATGGCATCCTGGTCCCCCAGCCAGTCGGAGCCCTTCACGGTGTCGTAGAAGTGCCACCTCCAGTTGTTCTCCTCCATGTTCCCCAGAGCAGCATTGATTCCAACCTG----GAAACCCC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179852857 184 - 180051392 GAGGGCGC-CCAGAGCCTCCCGCCCATCACCTCGACCACGGCGGCGGGAGCCTGCTCTGTCATGTAGTGGATGGCATCCTGGTCCCCCAGCCAGTCGGAGCCCTTCATGGTGTCGTAGAAATGCCACCTCCAGTTGTCCTCCTCCATGTTCCCCAGAGCAGCGTTGATTCCTCCCTG----GAAACACC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1321922 184 + 181584905 GAGGGCGC-CCAGAGCCTCCCGCCCATCACCTCGACCACGGCGGCGGGAGCCTGCTCTGTCATGTAGTGGATGGCATCCTGGTCCCCCAGCCAGTCGGAGCCCTTCACGGTGTCGTAGAAATGCCACCTCCAGTTGTCCTCCTCCATGTTCCCCAGAGCAGCGTTGATTCCTCCCTG----GAAACACC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 76987 184 + 100774 GAGGGCGC-CCAGAGCCCCCCGCCCATCACCTCGACCACGGCGGCGGGAGCCTGCTCTGTCATGTAGTGGATGGCATCCTGGTCCCCCAGCCAGTCGGAGCCCTTCACGGTGTCGTAGAAATGCCACCTCCAGTTGTCCTCCTCCATGTTCCCCAGAGCAGCATTGATTCCTCCCTG----GAAACACC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1415076 184 + 91010382 GAGGGCGC-CCAGAGCCCCCTGCCCATCACCTCGACCACGGCGGCGGGAGCCTGCTCTGTCATGTAGTGGATGGCATCCTGGTCCCCCAGTCAGTCGGAGCCCTTCATAGTGTCATAGAAATGCCACCTCCAGTTGTCCTCCTCCATGTTCCCCAGAGCAGCGTTGATTCCTCCCTG----GAAACACC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 897322 184 - 930449 GAGGGCGC-CCAGAGCCCCCCGCCCATCACCTCGACCACGGCGGCGGGAGCCTGCTCTGTCATGTAGTGGATGGCATCCTGGTCCCCCAGCCAGTCGGAGCCCTTCACGGTGTCGTAGAAATGCCACCTCCAGTTGTCCTCCTCCATGTTCCCCAGAGCAGCGTTGATTCCTCCCTG----GAAACACC i manLeu1.NW_012107609v1 N 0 C 0 s colAng1.NW_012116910v1 815275 184 - 1687011 GAGGGCGC-CCAGAGCCTCCCGCCCATCACCTCGACCACGGCGGCAGGGGCCTGCTCTGTCATGTAGTGGATGGCATCCTGGTCCCCCAGCCAGTCGGAGCCCTTCACGGTGTCGTAGAAATGCCACCTCCAGTTGTCCTCCTCCATGTTCCCCAGAGCAGCGTTGATTCCTCCCTG----GAAACACC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204168427 184 + 204313951 GAAAGCAC-CCACAGCCTCCCACTCATCACCTCGACCACGGCGGCAGGGGCCTGCTCTGTCATGTAGTGGATGGCATCCTGGTCCCCCAGCCAGTCGGAGCCTTTCACGGTGTCGTAGAAATGCCACCTCCAGTTGTCCTCCTCCATGTTCCCCAGAGCAGCATTGATTCCTCCCTG----GTAACAAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16310250 184 + 16417988 AAGAGCAC-CCACAGCCTCCCGCCTATCACCTCGACCACGGCGGCAGGGGCCTGCTCTGTCATGTAGTGGATGGCATCCTGGTCCCCCAGCCAGTCGGAGCCTTTCACGGTGTCGTAGAAATGCCACCTCCAGTTGTCCTCCTCCATGTTCCCCAGAGCAGCATTGATTCCTCCCTG----GAAACAAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 98074 184 - 306014 GAGAGCAC-CCTCAGCCTCCCGCCCGTCACCTCGACCACGGCGGCAGGGGCCTGCTCTGTCATGTAGTGGATGGCATCCTGGTCCCCCAGCCAGTCGGAGCCTTTCACGGTGTCGTAGAAATGCCACCTCCAGTTGTCCTCCTCCATGTTCCCCAGAGCAGCATTGATTCCTCCCTG----GAAACAAC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 140945 184 - 211231 GAAAGCAC-CCACAGCCTCCCGCCCATCACCTCGACCACGGCGGCGGGGGCCTGCTCTGTCATGTAGTGGATGGCGTCCTGGTCCCCCAGCCAGTCGGAGCCTTTGACGGTGTCGTAGAAATGCCACCTCCAGTTGTCCTCCTCCATGTTCCCCAGAGCAGCATTGATTCCTCCCTG----GAAACAGC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2129862 184 - 2165740 GGAGGCCC-CGTGAGCTTCCCACACATCACCTCAACCACAGCAGCAGGGGCCTGCTCCGTCATGTAGTGGATGGCATCTTGGTCCCCCAGCCAGTCAGAACCCTTCACGGTGTCATAGAAATGCCACCTCCAGTTGTCCTCTTCCATGTTTCCCAGAGCAGCATTGATTCCTCCCTG----GAAACACC i otoGar3.GL873745 I 1 C 0 s mm10.chr13 74339545 181 + 120421639 ----ATACACAAGAGTTTCCCGTCAGTTACCTCAACCACAGAGGCAGGAGCTTGCTCTGTCATGTAATGGATGGCATCCTGATCCCCCAGCCAGTCGGAGCCTTTCACAGTGTCATAGAAATGCCATCTCCAGTTGTCCTCTTCCATGTTCCCCAGAGCAGCATTGATACCTCCCTG----GAAATACC i mm10.chr13 C 0 I 1 s canFam3.chr34 11954928 172 + 42124431 -----------------GCGTGGACACTACCTCTACCACAGAAGCAGGGGCCTGCTCTGTCATGTAGTGGATGGCGTCCTGGTCCCCCAGCCAGTCGGAGCCCTTCACGGTGTCGTAGAAGTGCCACCTCCAGTTGTCCTCCTCCATGTTGCCCAGAGCAGCATTGATTCCTCCCTGCAAAGAGACAGC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 369371 162 - 913073 ---------------------GTATGTCACCTCGATCACTGAGGCAGGTGCTTGCTCCGTCATGTAATGGATTGCGTCCTGATCTCCCAGCCAATCCGATCCCTTCACAGTGTCGTAGAAATGCCACTTCCAGCTGTCCTCCTCCATGTTCCCCAGCGCGGCATTGATTCCTCCCTG----AAAACA-- i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 34050 3065 - 218577 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=215615.000000 s hg38.chr3_KI270934v1_alt 129349 18 + 163458 AACCACTCCTTACAAGCC s panTro5.chr3 2594509 18 - 202621043 AACCACTCCTTACAAGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 182095 18 - 190779 AACCAATCCTTACAAGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 22281 18 + 880730 AACCACTCCTTACAAGCC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179853041 18 - 180051392 AACCACTCCTTACAAGCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1322106 18 + 181584905 AACCACTCCTTACAAGCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 77171 18 + 100774 AACCACTCCTTACAAGCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 37115 18 - 218577 AACCACTCCTTACAAGCC i cerAty1.NW_012004452v1 M 3065 C 0 s chlSab2.chr4 1415260 18 + 91010382 AACCACTCCTTACAAGCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 897506 18 - 930449 AACCACTCCTTACAAGCC i manLeu1.NW_012107609v1 C 0 M 804 s colAng1.NW_012116910v1 815459 18 - 1687011 AAGCACTCCTTACAAGCC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204168611 18 + 204313951 AACCACTCCTTACAAACC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16310434 18 + 16417988 AACCACTCCTTACAGGCC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 98258 18 - 306014 AGCCACTCCTTATAAGCC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 141129 18 - 211231 AACCACTCCTTACAAGCC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2130046 18 - 2165740 AAGCACTCCTTACAAGTG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74339727 18 + 120421639 TACAACTGCTTACATATC i mm10.chr13 I 1 C 0 s canFam3.chr34 11955100 13 + 42124431 -----AACCTTACAAGCT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 369533 18 - 913073 GAGCACTCCTTACACGGC i dasNov3.JH577625 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=2416772.000000 s hg38.chr3_KI270934v1_alt 129367 305 + 163458 ACAAACAGGAGCCCCAGCTTTGTCTTCCAGGCCCAAATCCACCCGCTGGGG--------------GATTCAGAGAAAGCCAGCTACTCA-CATGG-TGACTCCCAGTGAGGG-----CTGACCTCAGCAGAGG--------AGCAGC--------CAGGCCTGACAGATTCCAGATCACAAC-CCCTCCCAGACTCACCCAGTG--------------ATTCCAtcccttag-cctcagtctcctcatctgtgtggtggagacagag-ggaactccagg-----aagggctgactggagcagtgagtgaaaggctacctgtaatatgcttattacctaacgtatctggc-acagaaaaggtactc s panTro5.chr3 2594527 305 - 202621043 ACAAACAGGAGCCCCAGCTTTGTCTTCCAGGCCCAAATCCACCCGCTGGGG--------------GATTCAGAGAAAGCCAACTACTCA-CATGG-TGACTCCCAGTGAGGG-----CTGACCTCAGCAGAGG--------AGCAGC--------CAGGCCTGACAGATTCCAGATCACAAC-CCCTCCCAGACTCACCCAGTG--------------ATTCCAtcccttag-cctcagtctcctcatctgtgtggtggagacagag-ggaactccagg-----aagggctgactggagcagtgagtgaaaggctacctgtaatatgcttattacctaacgtatctggc-acagaaaaggtactc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 182113 305 - 190779 ACTAACAGGAGCCCCAGCTTTGTCTTCCAGGCCCAAATCCACCCGCTGGGG--------------GATTCAGAGAAAGCCAACTACTCA-CATGG-TGACTCCCAGTGAGGG-----CTGACCTCAGCAGAGG--------AGCAGC--------CAGGCCTGACAGATTCCAGATCACAAC-CCCTCCCAGACTCACCCAGTG--------------ATTCCAtcccttag-cctcagtctcctcatctgtgtggtggagacagag-ggaagtccagg-----aagggctgactggagcagtgagtgaaaggctacctgtaatatgcttattacctaacgtatctggc-acagaaaaggtactc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 22299 307 + 880730 ACAAACAGGAGCCCCACCTTTGTCTTCCAGGCCCAAATCCACCCGCTGGGG--------------GATTCAGAGAAAGCCAACTACTCA-CGCGGTTGACTCCCAGTGAGGG-----CTGACCTCAGCAGAGG--------AGCAGC--------CAGGCCTGACAGATTCCAGATCACAAC-CCCTCCCAGACTCACCCAGTG--------------ATTCCAtcccttagccctcagtctcctcatctgtgtggtggagacagag-ggaactccagg-----aagggatgactggagcagtgagtgaaaggctacctgtaatatgcttattacctaacgtatctggc-acagaaaaggtactc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179853059 305 - 180051392 ACAAACAGGAGCCCCAGCTTTGTCTTCCAGGCCCAAATCCACCCACTGGGG--------------GATTCAGAGAAAGCCAACTCCTCA-CACGG-TGACTCCCAGTGAGGG-----CTGACCTCAGCAGAGG--------AGCAGC--------GAGGCCCGACAGATTCCGGGTCACGAC-CCTCCCCCGACTCGCCCGgtg--------------attcaatcccttag-cctcagtctcctcatctgtgtggtggagacagag-ggaactccagg-----aagggctgactggagcagtgagtgaaaggctacctgtaatatgcttattacctaacatatctggc-acagaaaaggtactc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1322124 305 + 181584905 ACAAACAGGAGCCCCAGCTTTGTCTTCCAGGCCCAAATCCACCCACTGGGG--------------GATTCAGAGAAAGCCAACTCCTCA-CACGG-TGACTCCCAGTGAGGG-----CTGACCTCAGCAGAGG--------AGCAGC--------GAGGCCCCACAGATTCTGGGTCACGAC-CCTCCCCTGACTCGCCCGGTG--------------ATTCAAtcccttag-cctcagtctcctcatctgtgtggtggagacagag-ggaactccagg-----aagggctgactggagccgtgagtgacaggctacctgtaatatgcttattacctaacatatctggc-acagaaaaggtactc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 77189 305 + 100774 ACAAACAGGAGCCCCAGCTTTGTCTTCCAGACCCAAATCCACCCACTGGGG--------------GATTCAGAGAAAGCCAACTCCTCA-CACGG-TGACTCCCAGTGAGGG-----CTGACCTCAGCAGAGG--------AGCAGC--------GAGGCCCCACAGATTCTGGGTCACGAC-CCTCCCCTGACTCGCCCGgtg--------------attcaatcccttag-cctcagtctcctcatctgtgtggtggagacagag-ggaactccagg-----aagggctgactggagccgtgagtgacaggctacctgtaatatgcttattacctaacatatctggc-acagaaaaggtactc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 37133 304 - 218577 ACAAACAGGAGCCCCAGCTTTGTCTTCCAGGCCCAAATCCACCCACTGGGG--------------GATTCAGAGAAAGCCAACTCCTCA-CGCGG-TGACTCCCAGTGAGGG-----CTGACCTCAGCAGAGG--------AGCAGC--------GAGGCCCGACAGATTCCGGGTCACGAC-CCTCCCCTGACTCGCCCGgtg--------------attcaatccctcag-cctcagtctcctcagctgtgtggtggcgacaga--ggaactccagg-----aagggctgactggagccgtgagtgacaggctacctgtaatatgcttattacctaacatatctggc-acagaaaaggtactc i cerAty1.NW_012004452v1 C 0 I 2327 s chlSab2.chr4 1415278 305 + 91010382 ACAAACAGGAGCCCCAGCTTTGTCTTCCAGGTCCAAATCCACCCACTGGGG--------------GATTCAGAGAAAGCCAACTCCTCA-CGCAG-TGACTCCCAGTGAGGG-----CTGACCTCAGCAGAGG--------AGCAGC--------GAGGCCCGACAGATTCCGGGTCACGAC-CCTCCCCCGACTCGCCCGGTG--------------ATTCAAtcccttag-cctcagtctcctcagctgtgtggtggagacagag-ggaactccagg-----aagggctgactggagcagtgagtgacaggctacctgtaatatgcttattacctaacatatctggc-acagaaaaggtactc i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 815477 303 - 1687011 ACAGACAGGCGCCCCAGCTTTGTCTTCCAGGCCCAAATCCACCCACTGGGG--------------G-TCCAGAGAAAGCCAACTCCTCA-CGCGG-TGACTCCCAGCGAGGG-----CTGACCTCAGCGGAGG--------AGCAGC--------GAGGCCCGACAGATTCCGGGTCACAAC-CCTCCCCAG-CTCGCCCagtg--------------attcaatcccttag-cctcagtctcctcatctgtgtggtggagacagag-ggagctccagg-----aagggcggaccggagccgtgagggaaaggctacctgtaatatgcttattacctaacatatctggc-acagaaaaggtactc i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204168629 304 + 204313951 ACAAACAGGAGCCCCAACTTTGTCTTCCAGGCCCAAATCCACCCACC-AGG--------------GATTCAGAGAAAGCCA-CTCCTCA-TGCAG-TGACTCCCAGGGAGAG-----CTGCCCTCAGCAGAGG--------GGCAGC--------AAGGCCGGGCAGATTCCAGATCACAACCCCTCCCCTGACTCGCCCagtg--------------attcactcccttag-cctcagtctcatcatctgtgtggtggagacagag-ggaactctagg-----aagggctgattggagcagtgagcaaaaggctacctgtgatatgcttattacctaacacacctggc-acagaaaaggtactc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16310452 303 + 16417988 ACAAACAGGAGCCCCAACTTGGTCTT-TAGGCCCAAATCCACCCACC-AGG--------------GACTCAGAGAAAGCCA-CTCCTCA-TGCAG-TGATTCCCAGGGAGAG-----CTGCCCTCAGCAGAGG--------GGCAAC--------AAGGCCGGACAGATTCCAGATCACAACTCCTCCCCTGACTCGCCCagtg--------------attcactcccttag-cctcagtctcctcatctgtgtggtggagacagag-ggagctccagg-----aagggctgattggagcagtgagcgaaaggctacctgtgatatgctgactacctaacacacctggc-acagaaaaagtactc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 98276 304 - 306014 ACAAACAGGAGCCCCAACTTTGTCTTCCAGGCTCAAATCCACCCACC-AGG--------------GATTCTGAGAAAGCCA-CTCCTCA-CGCAG-TGACTCCCAGGGAGAG-----CTGCCCTCAGCAGAGG--------GGCAGC--------AAGGCCAGACAGAGTCCAGATCACAACCCCTCCCCTGACTCGCCCagtg--------------attcactcccttag-tctcagtctcctcatctgtgtggtgcagacagag-ggaactccagg-----aagggctgattggggcggtgagcgaaaggctacctgtgatatgctgattacgtaacacacctggc-acagaaaaggtactc i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 141147 304 - 211231 ACAAACGGGAGCCCCAGCTTTGTCTTCCAGGCCCAAATCCACCCACC-AGG--------------GATTCAGAGAAAGCCA-CTCGTCA-TGCAG-GGACTCCCAGGGAGAG-----CTGCCCTCAGCAGAGG--------GGCAGC--------AAGGTCGGACAGATTCCAGATCACAGCCCCTCCCCTGACTCGCCCagtg--------------attcactcccctag-cctgagtctcctcatctgtgtggtggagacagac-ggaactccagg-----aagggctgattggagcagtgagcgaaaggctacctgtgatatgctgattacctaacacacctggc-acagaaaaggtactc i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2130064 273 - 2165740 ATAAGCGGGAGCCCCAGCTGCGTCTTCTGGGGCC-CATCTCCTCCCCAGGA-----------CCTGATTCAAAGAAAGCCAACTACTCAGTGCGG-TGACTCTCAGGGAGGC-----CTGACATCAGTAGA------------CAGT--------GAGGCCTGCTGGA-TCCAAATCACAAC-TACTCCCTG-----------------------------------CTTAG-TCT--GTCTCCTGACCTGTGCAATAGAGAT-GCG-TGAACTCCTCA-----AAGGCCTTTTTGGA---GTGAGTCAAAGGTTATACATAACATG---AGTACTTAACATACCTGGC-ACAGAAAAGGTCCTC i otoGar3.GL873745 C 0 I 3 s mm10.chr13 74339745 251 + 120421639 -TTAACA--------------GTCTCTGCAGCCCA---CCTCCCCCTCAGA-----------TCTGATTCAGGGACAGCAAACTCCGTA-TGTGG-TGACTCTTCATGAGGG-----TT----------AAGG--------AGCTGT--------AAGGCAGGACAGATTCCAAGTCATGAG-ACTTCCC-GAGTAGACAGATG--------------G--------CTTAA---------TTCTTATTTGTAATGGGAATGTTACT-TGATCTCCAGGCCTGTAAAGACTA---------------GAAAAGATCCTTGTAACTTAGCCATTGTTTATC-TACCTAACAACTGAAGATGTTC-- i mm10.chr13 C 0 C 0 s canFam3.chr34 11955113 229 + 42124431 ACAAGGAGAGGCCCCAGTGGTATCTTCTAGGCTC--ATCCCAGAACT---G--------------GGTTCAGAAAAAAACAAATGCTTT-CAACC-TAACTGTCTGTAAGGG---ACCTGACTGCAGTAGGGG--------TACAG---------------------------------Gac-c----------------------------------------tccctcag-cctcagtcctcccacctaagaagggacaagaagc-ccaactccaga---------gctaactggag------------ggtt-----cacaatgctcatcacttccca-acctggc-acataacaggtactc i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 369551 349 - 913073 ACGGGTGACAGGCCCGTCCCAGTTTTCCACGTCC--ATCTCCTTGCCAATGCCCCTGCCCACCCTGACTCACACAAAGCAAGCTGCCTG-TGCGG-TAACTGTGCGAGACAGTCTGCCTGAACCCTGCGGGGGGACCTCCTGGCAGCgtgaggcagaggcccg--agaccccgaagcacggctctttggcgggcgagccgagcgctgtgggccatgttatttaattcctcag-cccc-gtctccttgtccct-caatggggaaggagccaaattccttg-----aagagctgtttggacagctaagtgagaggttacgagcaaaatgccaagcacagaac-tacctggc-agagagaaggtgctc i dasNov3.JH577625 C 0 C 0 e manLeu1.NW_012107609v1 897524 804 - 930449 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=173849.000000 s hg38.chr3_KI270934v1_alt 129672 25 + 163458 catgaatCTCTCC-GCATAATTTT-AT s panTro5.chr3 2594832 25 - 202621043 catgaatCTCTCC-ACATAATTTT-AT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 182418 25 - 190779 catgaatCTCTCC-ACATAATTTT-AT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 22606 26 + 880730 catgaatCTCTCC-ACATAATTTTAAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179853364 25 - 180051392 aacaaatCTTTCC-AGATAATGTT-AT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1322429 25 + 181584905 aacaaatCTTTCC-AGATAATGTT-AT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 77494 25 + 100774 aacaaatCTTTCC-AGATAATGTT-AT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1415583 25 + 91010382 aacaaatCTTTCC-AGATAATGTT-AC i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 815780 25 - 1687011 aacaaatCTTCCC-AGATAATGGT-AC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204168933 25 + 204313951 aacaaatctttcc-agataatttt-at i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16310755 25 + 16417988 cacaaatCTTTCC-AGATAATTTT-AT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 98580 25 - 306014 aacaaatctttcc-agataatttt-at i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 141451 25 - 211231 aacaaatctttcc-agataatttt-at i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2130340 25 - 2165740 CTCAAACCTATTC-AGATCATTTT-AT i otoGar3.GL873745 I 3 C 0 s mm10.chr13 74339996 24 + 120421639 AACAAATCTATCT-GGA-AATTTT-AT i mm10.chr13 C 0 I 3094 s canFam3.chr34 11955342 26 + 42124431 aacaaatctgtctgggatCATTTT-AT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 369900 23 - 913073 aataaCCCCCTCC---ATCGTTTC-AT i dasNov3.JH577625 C 0 C 0 e manLeu1.NW_012107609v1 897524 804 - 930449 M e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=355508.000000 s hg38.chr3_KI270934v1_alt 129697 53 + 163458 TAACA-AATCTT-CCCAACGGCATTTACGGGCATGTGTT---AAAGATTAGAAGTGCT s panTro5.chr3 2594857 53 - 202621043 TAACA-AATCTT-CCCAACGGCATTTACGGGCATGTGTT---AAAGATTAGAAGTGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 182443 53 - 190779 TAACA-AATCTT-CCCAAAGGCATTTACGGGCATGTGTT---AAAGATTAGAAGTGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 22632 53 + 880730 TAACA-TATCTT-CCCAACAGCATTTACGGGCATGTGTT---AAAGATTAGAAGTGCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179853389 53 - 180051392 TAACA-AATCTT-CCCAATGGCATTTACGGGCATGTGTT---AAAGACCAGAAGTACT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1322454 53 + 181584905 TAACA-AATCTT-CCCAATGGCATTTACGGACATGATTT---AAAGACCAGAAGTGCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 77519 53 + 100774 TAACA-AATCTT-CCCAATGGCATTTGCGGGCATGTGTT---AAAGACCAGAAGTACT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1415608 53 + 91010382 TAACA-AATCTT-CCCAATGGCATTTACGGGCGTGAGTT---AAAGACCAGAAGTGCT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 815805 53 - 1687011 TAACA-AATCTT-CCCAGTGGCATTTACGGGCATCTGTT---AAAGACCAGAAGTGCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204168958 53 + 204313951 taACA-AACCTC-CCTAAAGGCATTTACAGGCATGTGTT---AAAGACTAGAAGTGCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16310780 53 + 16417988 TCATA-AACCTC-CCTAAAGGCATTTACAGGCATATGTT---AAAGACTAGAAGTGCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 98605 54 - 306014 tCACA-AACCTC-CCTAAAGGCATTTACAGGCATGTATTA--AAAGACTAGAAGTGTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 141476 53 - 211231 taACA-AACCTT-CCTAAAGGCATTTACAGGCATGTGTT---AAAGACCAGAAGTGCT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2130365 56 - 2165740 CATAA-AATGTC-CCCAATTCTATTTATGGGTATGTATTATTAAAGATGAGACATGCT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11955368 53 + 42124431 -GACAGAATGTT-GCTACTGGTATTTACAGGCATGTGTT---ACAGACAAGAAGTGCT i canFam3.chr34 C 0 I 1308 s dasNov3.JH577625 369923 41 - 913073 -GCCA-AAGCACGACCCAAGGCAGTCA-GGGCAT-TACT---GAAGAC---------- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74340020 3094 + 120421639 I e manLeu1.NW_012107609v1 897524 804 - 930449 M e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1353663.000000 s hg38.chr3_KI270934v1_alt 129750 191 + 163458 TCCTGCCAAGTAATAAACTCCATACTC--AGAGTCGCACTCCCCTGTACCCCTACTTCCTTTGGCTGTGTGTGCCCAC--CACCGTCTTACCCCTCAGAGAGTCCCAGAAGACAGCAGCACCAGGGACAAATGAAACCCTTGCCCTTTTCTTCCCCAACCTAAATTCTGAATCCTCCTCTTTAG---ATGATCTCCTT s panTro5.chr3 2594910 190 - 202621043 TCCTGCCAAGTAATAAACTCCACACTC--AGAGTCGCACTCCCCTGTACCCCTACTTCCTTTGGCTATGTGTGCCCAC--CACCGTCTTACCCCTCAGAGAGTCGCAGAAGACAGCAGCAC-AGGGACAAATGAAACCCTTGCCCTTTTCTTCCCCAACCTAAATTCTGAATCCTCCTCTTTAG---ATGATCTCCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 182496 190 - 190779 TCCTGCCAAGTAATAAACTCCATACTC--AGAGTTGCACTCCCCTGTACCCCTACTTCCTTTGGCTATGTGTGCCCAC--CACCGTCTTACACCTCAGAGAGTCCCAGAAGACAGCACCAC-AGCGACAAATGAAACCCTTGCCCTTTTCTTCCCCAACCTAAATTCTGAATCCTCCTCTTTAG---ATGATCTCCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 22685 189 + 880730 TCCTGCCAAGTAATAAACTCCACACTC--AGAGTCGCACTCCCCTGTACCCC-ACTTCCTTTGGCTGTGTGTGCCCAC--CACCGTCTTACCCCTCAGAGAGCCCCAGAAGACAGCACCAC-AGGGACAAATGAAACCCTTGCCCTTTTCTTCCCCAACCTAAATTCTGATTCCTCCTCTTTAG---ATGATCTCCTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179853442 190 - 180051392 TCCTGCCAAGTAATAAGCTCCACACTC--AGAGTCGCACTCCCCTGTACCCCTGCTTCCTTTGGCTGTGTGTGCCCAC--CACCGTCTTACTCCTCAGAGAGTTCCAGAGGACAGCAGCAC-GGGGACAAATAAAACCCTTGCCCTTTCCTTCCCCACCCTAAATTCTGATTCCTCCTCTTTAG---ATGATCTCCTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1322507 190 + 181584905 TCCTGCCAAGTAATAAGCTCCACACTC--AGAGTCGCACTCCCCTGTACCCCTGCTTCCTTTGGCTGTGTGTGCCCAC--CACCGTCTTACTCCTCAGAGAGTCCCAGAGGACAGCAGCAC-GGGGACAAATAAAATCCTTGCCCTTTCCTTCCCCACCCTAAATTCTGATTCCTCCTCTTTAG---ATGATCTCCTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 77572 190 + 100774 TCCTGCCAAGTAATAAGCTCCACACTC--AGAGTCGCACTCCCCTGTACCCCTGCTTCCTTTGGCTGTGTGTGCCCAC--CACCGTCTTACTCCTCAGAGAGTTCCAGAGGACAGCAGCAC-GGGGACAAATAAAACCCTTGCCCTTTCCTTCCCCACCCTAAATTCTGATTCCTCCTCTTTAG---ATGATCTCCTT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1415661 190 + 91010382 TCCTGCCAAGTAATAAGCTCCACACTC--AGAGTCGCACTCCCCTGTACCCCTGCTTCCTTTGGCTGTGTGTGCCCAC--CACCGTCTTATTCCTCAGAGAGTTCCAGAAGACAGCAGTAC-AGGGACAAATAAAACCCTTGCCCTTTCCTTCCCTACCCTAAATTCTGATTCTTCCTCTTTAG---ATGATCTCCTT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 815858 190 - 1687011 TCCTGCCAAGTAATAAGCTCCACACTC--AGAGTCACACTCCCCTGTACCCCTGCTTCCTTTGGCTGTGTGTGCCCAC--CACCGTCTTACTCCTCAGAGACTCCCAGAAGACAGCAGCAT-GGGGACAAATACAGCCCTTGCCCTTTCCTTCCCCACCCTAAATTCTGATTCCTCCTCTTTAG---ATGATCTCCTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204169011 190 + 204313951 TCCTGCCCAGAAATAAACTCCACACTC-AAGAGTCACACTTCCCGGCACCCCC-TCTCCTTCGGCTGTTTGTGGCCAC--CACCATTTCACCCCTCAGAGAGTCCCAGAGGATGGCAGCAC-AGGGACAAATGAAACCCTTGCCCTTTTCTTCCCCAACCTAAATTCTGATTACTCCTCTTTAG---ATGATCTCCTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16310833 190 + 16417988 TCCTGCCAAGAAATAAACTCCACACTC--AGAGTCACACTCCCCAGCACCCCCACCTCCTTCGGCTGTTTGTGGCCAC--CATCGTCTTACCCCTCAGAGAGTCCCAGAAGACGGCAGCAC-AGGGACAAATGAAACCCTTGCCCTTTTCTTCCCCAACCTAAATTCTGATTCCTCCTCTTTAG---ATGATCTCCCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 98659 193 - 306014 TCCTGCCAAGAAATAAACTCCACACTC--AGAGTCACACTCCCTGGCACCCCCACCTCCATCAGCTGTTTGTGGCCAC--CACCGTCTTACCCCTCAGAGAGTCCCAGAAGACAGCAGCAC-AGGGACAAATGAAACCCTTGCCCTTTTCTTCCCCAACCTAAATTCTGATTCCTCCTCTTTAGAAAATAATCTCCTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 141529 190 - 211231 TCCTGCCAAGAAATAAACTCCACACTC--AGAGTCACACTCCCCGGCACCCCCACCTCCTTCGGCTGTTTGTGGCCAC--CACCGTCTCACCCCTCAGAGAGTCCCAGAAGATGGCAGCAC-AGGGACAAATGAAACCCTTGCCCTTTTCTTCCCCAACCTAAATTCTGATTCCTGCTCTTTAG---ATGATCTCCTT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2130421 178 - 2165740 TATT-------------CTCTGTACTCCAAGAACTATACTCCCCTGCATCAG-GCTTCCCTCTTCTGTGTGTGGCCTCTGCTCTGCTTTATACTTCAGAGG--TACAGAACACGGCAGCAC-AGGGACAAATGAAACTCTCACCTTTTTCTTCTCCAATCTAACTTTTGATTCTTCTTCTTTAG---ATAATCTCTTT i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 369964 143 - 913073 ------------------------CGC--ATGGCCACACTCCCTGATGCCCGTGCCCCCTC----------TCCCCTC--CGCCTTCT-------------GCCACAGAACACGGTAGTGT-AGGGACAAATGGACCACTCACCCTCTTCTTCCCCAACCTCAGTTTGGAATATTTTCCTTTAG---ATAATCTATTT i dasNov3.JH577625 C 0 I 958 e mm10.chr13 74340020 3094 + 120421639 I e canFam3.chr34 11955421 1308 + 42124431 I e manLeu1.NW_012107609v1 897524 804 - 930449 M e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=149891.000000 s hg38.chr3_KI270934v1_alt 129941 25 + 163458 TTCTTAAGGTGTTGGGGTGGCAGGG s panTro5.chr3 2595100 25 - 202621043 TTCTTAAGGTGTTGGGGTGGCAGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 182686 25 - 190779 TTCTTAAGGTGTTGGGGTGGCAGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 22874 25 + 880730 TTCTTAAGGTGTTGGGGTGGCAGGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179853632 25 - 180051392 TTCTTAAGGTGTTGGGGCGGTGGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1322697 25 + 181584905 TTCTTAAGGTGTTGGGGCGGTGGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 77762 25 + 100774 TTCTTAAGGTGTTGGGGCGGTGGGG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1415851 25 + 91010382 TTCTTAAGGTGTTGGGGCGGTGGGG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 816048 25 - 1687011 TTCTTAAGGTGTTGGGGCGGTGGGG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204169201 25 + 204313951 TTCTTACGGTGTTGGGGAGGTGAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16311023 25 + 16417988 TTCTTAAGGTGTTGGGGTGGTGAGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 98852 24 - 306014 TTCTTAAGGTA-TGGGGTGGTGAGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 141719 25 - 211231 TTCTTAAGGTGTTGGGGTGGTGAGG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2130599 18 - 2165740 CTCACAGGGCA-TGGTGCG------ i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74340020 3094 + 120421639 I e dasNov3.JH577625 370107 958 - 913073 I e canFam3.chr34 11955421 1308 + 42124431 I e manLeu1.NW_012107609v1 897524 804 - 930449 M e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=51672.000000 s hg38.chr3_KI270934v1_alt 129966 7 + 163458 GTGGGTG s panTro5.chr3 2595125 7 - 202621043 GTGGGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 182711 7 - 190779 GTGGGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 22899 7 + 880730 GTGGGTG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179853657 7 - 180051392 GTGGGTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1322722 7 + 181584905 GTGGGTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 77787 7 + 100774 GTGGGTG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1415876 7 + 91010382 GTGGCTG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 816073 7 - 1687011 GTGGGTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204169226 7 + 204313951 GTGGGTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16311048 7 + 16417988 GTCGGTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 98876 7 - 306014 GTGGGTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 141744 7 - 211231 GTGGGTG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2130617 1 - 2165740 ------G i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11956729 7 + 42124431 GTGGGCA i canFam3.chr34 I 1308 C 0 e mm10.chr13 74340020 3094 + 120421639 I e dasNov3.JH577625 370107 958 - 913073 I e manLeu1.NW_012107609v1 897524 804 - 930449 M e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=952237.000000 s hg38.chr3_KI270934v1_alt 129973 151 + 163458 ---GGGAGGGT--------AGATGGTCAGAGAAAACCCAAGTGTGACTGGAGTCTGAATTAAGAGTGACAACAAGGCTCCCGCCCTTCAAAGTCCC---CAGGGAA---GAGGC--TCCAGGGAGAGAC-CCCTGAATGGGTGAGCTG--AGT----AAGGCACAgcaagaggccaa s panTro5.chr3 2595132 151 - 202621043 ---GGGAGGGT--------AGATGGTCAGAGAAAACCCAAGTGTGACTGGAGTCTGAATTAAGAGTGACAACAAGGCTCCCGCCCTTCAAAGTCCC---CAGGGAA---GAGGC--TCCAGGGAGAGAC-CCCTGAATGGGTGAGCTG--AAT----AAGGCACAGCAAGAGGCCAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 182718 151 - 190779 ---GGGAGGGT--------AGATGGTCAGAGAAAACCCAAGTGTGACTGGAGTCTGAATTAAGAGTGACAACAAGGCTCCCGCCCTTCAAAGTCCC---CAGGGAA---GAGGC--TCCAGGGAGAGAC-CCCTGAATGGGTGAGCTG--AGT----AAGGCACAGCAAGAGGCCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 22906 149 + 880730 ---GGGAGGGT--------AGATGGTCAGAGAAAACCCAAGTGTGACTGGAGTCTGAATTAAGAGTGACAACAAGGCTCCCGCCCTTCAAAGTCCC---CAGGGAA---GAGGC--TCCAGGGATAGAC-CC--GAGAGGGTGAGCTG--AGT----AAGGCACAGCAACAGGCCAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179853664 163 - 180051392 ---GGGAGGGAAGTAGGCGAGATGGTCAAAGAAAACCCGAGTGTGACTGGAGTCCCAACTAGGAGTGACAACAAGGCTCCAGCCCTTCCAAGTCTC---CAGGGAA---GAGGC--TCCAGGGAAAGAC-CGCTGAGAGGGTGAGCTG--AGTGAGCAAGGCACAGCAAGAGGCCAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1322729 163 + 181584905 ---GGGAGGGAAGTAGGCGAGATGGTCAAAGAAAACCCGAGTGTGACTGGAGTCCCAACTAGGAGTGACAACAAGGCTCCAGCCCTTCCAAGTCTC---CAGGGAA---GAGGC--TCCAGGGAAAGAC-CGCTGAGAGGGTGAGCTG--AGTGAGCAAGGCACAgcaagaggccat i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 77794 163 + 100774 ---GGGAGGGAAGTAGGCGAGAAGGTCAAAGAAAACCCAAGTGTGACTGGAGTCCCAACTAGGAGTGACAACAaggctccagcccttccaagtctc---cagggaa---caggc--tccaggGAAAGAC-CGCTGAGAGGGTGAGCTG--AGTGAGCAAGGCACAgcaagaggccat i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1415883 163 + 91010382 ---GGGAGGGTAGTAGGCGAGAAGGTCAAAGAAAACCCAAGTGTGACTGGAGTCCCAACTAGGAGTGACAACAAGGCTCCAGCCCTTCCAAGTCTC---CAGGGAA---GAGGC--TCCAGGGAAAGAC-CGCTGAGAGGGTGAGCTG--AGTGAGCAAGGCACAgcaagaggtcat i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 816080 163 - 1687011 ---GGGAGGAAAGTAGGCGAGATGGTCAAAGAAAACCCAAGTGTGACTGGAGTCCCAACTAGGAGTGACAACAAGGCTCCAGCCCTTCCAAGTCTC---CAGGGAG---CAGGC--TCCAGGGAAAGAC-CACTGAGAGGGTGAGCTG--AGTGAGCAAGGCACAGCAAGAGGCCAT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204169233 161 + 204313951 ---GGGAGGGTAGTAGGCGAGATGGTCAGAGAAAACCCAGCTGTGACTGAAGTTCCAATTAAGAGTGACAGCAAGGCTCCAGCTCTTCAAAGTCCC---CATGGAA---GAGGC--TCCAGGCAAAAAC-CCCTGAGAGG--GAGCTG--AGAGAGCAATGCACAGCAAGAGGCCAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16311055 161 + 16417988 ---GGGAGGGCAGTGGGCGAGACGGTCAGAGAACACCCAACTGCGACTGAAGTCCCAAGTAAGAGTGACGGCAAGGCTTCAGCTCTTCAAAGTCCC---CATGGAA---GAGGC--TCCAGGAAAAAAC-CCCTGAGAGG--GAGCTG--AGTGAGCAAGGCACAGCAACAGGCCAT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 98883 160 - 306014 ---GGGAGGGTAGTAGGCAAGATGGTCAGAGAAAACCCAACTGTGACTG-AGTCCCAATTAAGAGTGACAGCAAGGCTTCAGCTCTTCAAAGTCCC---CATGGAA---AAGGC--TCCAGGAAAAAAC-CCCTGGGAGA--GAGGTG--AGTGAGCAAGGCACAGCAAGAGGCCAT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 141751 161 - 211231 ---GGGAGGGTAGCAGGCGAGACGGTCAGAGAAAACCCAACTGTGACTGAAGTCCCAATTAAGAGCGACAGCAAGCCTCCAGCTCTTCAAAGTCCC---CATGGAA---GAGCC--TCCAGGCAGAAAC-CCCTGAGAGG--GAGCTG--AGTGAGCAAGGCACAGCAAGAGGCCAT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2130618 142 - 2165740 ---GGTGGGGCACTACACAGGATAGTTCAAGGAGACCCAAGTATGACTGAAGCCCCAG-TAAGAGTGA-GACAAGTCTCCAGTGCTGCATAGTCCC---TAGGGAA---GACAA--TCCTGGCAGAGAG-CCCAGAGTAT---------------------AACAGCATGAAGCAAG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74343114 127 + 120421639 ---GGCAGGAC--------AGCTGG---GAAAAGACCCATGTATGA----------------AAATAACAATGAGGTGCCAATCCCACAATGGTCC---CGAGGTA---GAGAT--TACCAGCAGTGA----CTTGGAAAGTGA---G--AATGAATGATGAACTG---GATGCCAA i mm10.chr13 I 3094 I 5 s canFam3.chr34 11956736 157 + 42124431 GGGGGCAAGGT--------GGGTGCTCAGAGAAGACCTGAGTGTAACTGGAG--CAGAGAAGAGGTGA----GAGGCTCCAGAGC------GGCTCTAGCATGGGACTGGAGGCAGTACACGCACAGACACCCAAGGTGAGTGAGCTGACAGGGTGCAAGGAGCAAAAGGAGACAAA i canFam3.chr34 C 0 I 1 e dasNov3.JH577625 370107 958 - 913073 I e manLeu1.NW_012107609v1 897524 804 - 930449 M e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=606421.000000 s hg38.chr3_KI270934v1_alt 130124 92 + 163458 gtggctggagcac---agggaggaggcaggaggcTGCCCAGGTAGAAAGTGCGAGGCTGCGCGGGACC-TGCACGGAGTGGGAGCACAGTGGGGCA s panTro5.chr3 2595283 92 - 202621043 GTGGCTGGAGCAC---GGGGAGGAGGCAGGAGGCTGCCCAGGTAGAAAGTGCGAGGCTGTGCGGGACC-TGCACGGAGTGGGAGCACAGTGGGGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 182869 92 - 190779 GTGGCTGGAGCAC---GGGGAGGAGGCAGGAGGCTGCCCAGGTAGAAAGTGCGAGGCTGCACGGGACC-TGCACGGAGCGGGAGCACAGTGGGGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 23055 92 + 880730 GTGGCTGGAGCAC---GGGGAGGAGGCAGGAGGCTGCCCAGGTAGAAAGTGCGAGGCTGCGCGGGACC-TGCACGGAGTGGGAGCACAGTGGGGCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179853827 92 - 180051392 GTGGCTGGAGCAT---GGGGAGGAGGCAGGAGGCTGCCCAGGTAGAAAGCGCGAGGCTGTGCGGGACC-TGCACAGAGTGGGAGCACGGTGGGGCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1322892 92 + 181584905 gtggctggagcat---ggggaggaggcaggaggcTGCCCAGGTAGAAAGCGCAAGGCTGTGCGGGACC-TGCACAGAGTGGGAGCACGGTGGGGCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 77957 92 + 100774 gtggctggagcat---ggggaggaggcaggaggcTGCCCAGGTAGAAAGCGCAAGGCTGTGCGGGACC-TGCACAGAGTGGGAGCACGGTGGGGCA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1416046 91 + 91010382 gtggctggagcat---ggggaggaggcaggaggcTGCCCAGGTAGAAAGCGCAAGGCTGGGCGGGACC-TGCGCAGAGT-GGAGCACGGTGGGGCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 898328 92 - 930449 GTGGCTGGAGCAT---GGGGAGGAGGCAGGAGGCTGCCCAGGTAGAAAGCGCAAGGCTGTGCGGGACC-TGCACAGAGTGGGAGCACGGCGGGGCA i manLeu1.NW_012107609v1 M 804 C 0 s colAng1.NW_012116910v1 816243 91 - 1687011 GTGGCTGGAGCAT---GGGGAGGA-GCAGGAGGCTGCCCGGGTAGAAAGCGCAAGGCTGTGCGGGACC-TGTACAGAGTGGGAGCATGGTGGGGCC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204169394 91 + 204313951 GTGGCTGAAGCAT---GGGGAGGAGGCAGGAGGCCGCCCGGGTGGAAGGCGCAAGGCTGGGC-AGACA-TGCAGGCAGTGAGAGCGTGGCGGGGCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16311216 90 + 16417988 GTGGCTGAAGCAT----GGGAGGAGGCAGGAGGCCGCCCAGGTGGAAGGTGCAAGGCCGTGC-AGGCA-TGCCGGCAGTGAGAGCATGGCGGGGCA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 99043 91 - 306014 GTGGCTGAAGCAT---GGGAAGGGGGCAGGAGGCCGCCCAAGGGGAAGGCGCAAGGCTGTGC-AGACA-TGCAGGCAGCGAGAGCATGGCGGGGCA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 141912 69 - 211231 GTGGCTGAAGCAT---GGGGAGGAGGCAGGAGGCCGCCCAG-----------------------GACA-CGCAGGCAGCGAGAGCGTGGCGGGGCA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2130760 80 - 2165740 -----CACATCAC---AGGAAGGAGGCAGGAGGCTGCTCAGGCAGTGGGT------CTGTTTGGGACATTGCACAAGGTGAAAGGATCTAGAGG-- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74343246 79 + 120421639 GTGGCTGAAGCTT---AATAAGAAGACTTTGTATTA------TAGGAGAGGTGGTGCTGTACAAGATC-TGT------TGGTATCAAAAGAGGGC- i mm10.chr13 I 5 C 0 s canFam3.chr34 11956894 78 + 42124431 GTGGCTGTACTGTTGTGGGAAGGAGGCTTGTGGC------AGGAGACTGCGCCCTGCTGTGCAGGTTC---CAAACCACTAAACCAC--------- i canFam3.chr34 I 1 C 0 e dasNov3.JH577625 370107 958 - 913073 I e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=3701868.000000 s hg38.chr3_KI270934v1_alt 130216 367 + 163458 CCTTTCTCTTACCTGCGCTGCAACAGTGTGTGACCTGGTAGGAAACAGCTTGGTAACACATGCTGTATCAAACTCTGCCTCGGAAAGGCCAAATGCAGCTCGCAAAGCCTGCCCCTCCAGCGCCTACCACCACTGCATCAAATTCATGATCCACTACTGGATACTGAGCAGAAATCTGGAAAAGAAAAATTCACCTGTCAAGCACAGGTTCCACTATGCCAAACATGAAGACTCTTGTGCCAGTGAAAGAGCTT----------GACAAAGATA-AAA-----GGAGCAACT-GCTGGGCACA-----CA-GGGCCTCCATCCTGTCCTGGGGCTGAG--------CCC-------TGAACAGTGCAGGGA--GA-----------AGTAGGCACATTC------GCACCTGGAG--------------------------------------------AAGGGACTG s panTro5.chr3 2595375 359 - 202621043 CCTTTCTCTTACCTGCGCTGCAACAGTGTGTGACCTGGTAGGAAACAGCTTGGTAACACATGCTGTATCAAACTCTGCCTCGGAAAGGCCAAATGCAGCTCGCAA-GCCTGCCCTTCTAGCGCCTACCATCACTGCATCAAATTCATGATCCACTACTG-------AGCAGAAATCTGGGAAAGAAAAATTCACCTGTCAATCACACGTTCCACTATGCCAAACATGAAGACTCTTGTGCCAGTGAAAGAGCTT----------GACAAAGATA-AAA-----GGAGCAACT-GCTGGGCATA-----CA-GGGCCTCCATCCTGTCCTGGGGCTGAG--------CCC-------TGAACAGTGCGGGGA--GA-----------AGTAGGCACATTC------GCACCTGGAG--------------------------------------------AAGGGACTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 182961 367 - 190779 TCTTTCTCTTACCTGCGCTGCAACAGTGTGTGACCTGGTAGGAAACAGCTTGGTAACACATGCTGTATCAAACTCTGCCTCGGAAAGGCCAAATGCAGCTCGCAAAGCCTGCCCCTCCAGCGCCTACCACCACTGCATCAAATTCATGATCCACTACTGGATACTGAGCAGAAATCTGGAGAAGAAAAATTCACCTGTCAATCACACGTTCCACTATGCCAAACATGAAGACTCTTGTGCCAGTGAAAGAGCTT----------GACAAAGATA-AAA-----GGAGCAACT-GCTGGGCACA-----CA-GGGCCTCCATCCTGTCCTGGGGCTGAG--------CCC-------TGAACAGTGCGGGGA--GA-----------AGTAGGCACATTC------GCACCTGGAG--------------------------------------------AAGGGACTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 23147 364 + 880730 TCTTTCTCTTACTTGCGCTGCAACAGTGTGTGACCTGGTAGGAAACAGCTTGGTAACACATGCTGTATTCAACCCTGCCTCGGAAAGGCCAAATGCAGCTCGCAA-GCCTGCCCCTCCAGCGCCTACCACCACTGCATCAAATTCATGATCCACTACTGGATACTGAGCAGAAATCTGGAAAAGAAAAATTCACCTGTCAATCACACGTTCCACCATGCCAAACATGAAGA--CTTGTGCCAGTGAAAGAGCTT----------GACAAAGATA-AAA-----GGAGCAACT-GCTGGGCACA-----CA-AGGCCTCCATCCTGTCCTGGGGCTGAG--------CCC-------TGAACAGCGCGGGGA--GA-----------AGTAGGCACATTC------GCACCTGGAG--------------------------------------------GAGGGACTG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179853919 366 - 180051392 CCTTTCTCTTACCTGTGCCGCAACAGTGTGTGACCTGGTAGGAAACAGCTTTGTAACACATGCTGTATTAAACCCTGCCTCAGAAAGGCCAAATGCAGCTCGCAA-GCCTGCCCCTCCAGCGCCTACCACCACCGCATCAAATTCATGATCCACTACTGGATACTGAGCAGAAATCTGGAAAAGAAAAACGCACCTGTCAATCACGTGCTCCACTATGCCAACCACGAAGACTCTTGTTACAGTGAAGGAGCTT----------GACAAAGACA-AAA-----GGACCAACT-GCTAGGCACA-----CA-GGGCCTCCATCCTGTCCTGGGGCTGAG--------CCC-------TGAACAGTGCGGGGA--GA-----------AGTGGGCACATTC------GCACGTGGAG--------------------------------------------AAGGGACTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1322984 366 + 181584905 CCTTTCTCTTACCTGTGCCGCAACAGTGTGTGACCTGGTAGGAAACAGCTTTGTAACACATGCTGTATGAAACCCTGCCTCAGAAAGGCCAAATGCAGCTCGCAA-GCCTGCCCCTCCAGCGCCTACCACCACCGCATCAAATTCATGATCCACTACTGGATACTGAGCAGAAATCTGGAAAAGAAAAACGCACCTGTCAATCACGTGCTCCACTATGCCAACCACGAAGACTCTTGTTACAGTGAAGGAGCTT----------GACAAAGACA-AAA-----GGACCAACT-GCTAGGCACA-----CA-GGGCCTCCATCCTGTCCTGGGGCTGAG--------CCC-------TGAACAGTGCAGGGA--GA-----------GGTGGGCACATTC------GCACGTGGAG--------------------------------------------AAGGGACTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 78049 366 + 100774 CCTTTCTCTTACCTGTGCCGCAACAGTGTGTGACCTGGTAGGAAACAGCTTTGTAACACATGCTGTATTAAACCCTGCCTCAGAAAGGCCAAATGCAGCTCGCAA-GCCTGCCCCTCCAGCGCCTACCACCACTGCATCAAATTCATGATCCACTACTGGATACTGAGCAGAAATCTGGAAAAGAAAAACACACCTGTCAATCACGTGCTCCACTATGCCAACCACGAAGACTCTTGTTACAGTGAAGGAGCTT----------GACAAAGACA-AAA-----GGACCAACT-GCTAGGCACA-----CA-GGGCCTCCATCCTGTCCTGGGGCTGAG--------CCC-------TGAACAGTGCGGGGA--GA-----------AGTGGGCACATTC------GCCCGTGGAG--------------------------------------------AAGGGACTG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1416137 366 + 91010382 CCTTTCTCTTACCTGCACTGCAACAGTGTGTGACCTGGTAGGAAACAGCTTTGTAACACATGTGGTATTAAACCCTGCCTCAGAAAGGCCAAATGCAGCTCGCAA-GCCTGCCCCTCCAGCGCCTACCACCACTGCATCAAATTCATGATCCGCTACTGGATACTGAGCAGAAATCTGGAAAAGAAAAATGCACCTGTCAATCACGTGCTCCACTATGCCAAACACGAAGACTCTTGTTACAGTGAAGGAGCCT----------GACAAAGACA-AAA-----GGAGCAAAT-GCTAGGCACA-----CA-GGGCCTCCATCCTGTCCTGGGGCTGAG--------CCC-------TGAACAGTGCAGGGA--GA-----------AGTGGGCACATTC------GCACGTGGAG--------------------------------------------AAGGGACTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 898420 365 - 930449 CCTTTCTCTTACCTGCGCTGCAACAGTGTGTGACCTGGTAGGAAACAGCTTTGTAACACATGCTGTATTAAACCCTGCCTCAGAAAGGCCAAATGCAGCTCGCAA-GCCTGCCCCTCCAGCGCCTACCACCACTGCATCAAATTCATGATCCACTACTGGATACTGAGCAGAAATCTGGAAAAGAAAAATGCACCTGTCAATCACGTGCTCCACTATGCCAACCACGAAGACTCTTGTTACAGTGAA-GAGCTT----------GACAAAGACC-AAA-----GGACCAACT-GCTAGGCACA-----CA-GGGCCTCCATCCTGTCCTGGGGCTGAG--------CCC-------TGAACAGTGCGGGGA--GA-----------AGTGGGCACATTC------GCACGTGGAG--------------------------------------------AAGGGACTG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 816334 365 - 1687011 CCTTTCTCTTACCTGCGCTGCGACAGTGTGTGACCTGGTAGGAAACAGCTTTGTGACACACGCTGTATTAAACCCTGCCTCACAAAGGCCAAAGGCAGCTCGCAA-GCCCGCCCCTCCAGCGCCTACCACCACTGCATCAAATTCATGATCCACTACTGGATACTGAGCAGAAATCTGGAAAAGAAAAATTCACCTGTCAATCACGTGCTCCACTACGCCAAACACGAAGACGCTTGTTACAGTGAAGGAGCTT----------GACAAAGACA-CAA-----GGACCACCT-GCCAGGCACA-----CA-GGGCCTCCATCCTGTCC-GGGGCTGAG--------CCC-------TGAACACTGCGGGGA--GA-----------GGGGGGCACATTC------GCACGCGGAG--------------------------------------------AAGGGACTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204169485 364 + 204313951 CCTTTCTCTTACCTGGGCTGCAACAGTGTGTGACCTGGTGGGAAACAGCTTGGTAACACATGCTGTATTAAACCCTGCCTCAGAAAGCCCAAACGCAGCTCGCAG-GCCTGCCCCTCCAGCGCCCACCACCACGGCATCAAATTCATGGTCCACTACTGGATACTGAGCAGAAATCTGGAAAATAAAAATTCACCTGCCAATCGCATATTCCACTATGCCAAACACGAAGACTATGGTT--AGTTCAAGAGCTT----------GAAAAGGATA-AAA-----GGAGCAACT-GCTAGGCCCA-----CA-AGGCCTCCATCCTGTCCCGGGGCTGAG--------CAC-------TGAACAGTGCGGGAA--GA-----------GGTGGGCACGTCC------ACACGTGGAG--------------------------------------------AAGGGACTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16311306 365 + 16417988 CCTTTCTCTTACCTGGGCTGCAACAGTGTGTGACCTGGTAGGAAACAGCTTGGTAACACATGCCGTATTAAACCCTGCCTCAGAAAGGCCAAACGCAGCTCGCAA-GCCTGCCCCTCCAGCGCCCACCACCACTGCATCAAATTCATGATCCACTACTGGATACTGAGCAGAAATCTGGAAAATAAAAATTCACCTGTCAATCACATATTCCATTATGCCAAACATGAAGACTATGGTTACAGTGCAAGAGCTT----------GAAAAAGGTA-AAA-----GGAGCAACT-GCTAGGCCCA-----CA-GGGCCTCCATCCTGTCCC-GGGCTGAG--------CAC-------TGAACGGTGCGGGAA--GA-----------GGTGGGCACGTTC------ACACGTGGAG--------------------------------------------AAGGGACTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 99134 361 - 306014 GCTTTCTCTTACCTGGGCTGCAACAGTGTGTGACCTGGTAGGAAACAGCTTGGTAACACATGCCGTATTAAACCCTGCCTCAGAAAGGCCAAACGCAGCTCGCAG-GCCTGCCCCTCCAGCGCCCACCACCACTGCATCAAATTCATGATCCACTACTGGATACTGAGCAGAAATCTGGAAAATAAAAATTCACCTGTCAATCACATATTCCACTATGCCAAACATGAAGACTATGGTT-----TACAGAGCTT----------GAAAAAGATA-AAA-----GGAGCCACTGGCTAGGCCCA-----CA-GGGCCTCCATCCTGTCCC-GGGCTGAG--------CAC-------TGAGCAGTGCGGGGA--GA-----------GGCGGGCACGTTC------ACACGTGGAG--------------------------------------------AAGGGACTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 141981 366 - 211231 CCTTTCTCTTACCTGGGCGGCAACAGTGTGTGACCTGGTAGGAAACAGCTTGGTAACACATGCTGTATTAAACCCTGCCTCAGAAAGGCCAAATGCAGCTCGCAA-GCCTGCCCCTCCGGCGCCCACCACCACTGCGTCAAATTCATGATCCACTACTGGATACTGAGCAGAAATCTGGAAAATAAAAATTCACCTGTCAATCACATATTCCACCATGCCAAACACGAAGACTATGGTTACAGTGCAAGAGCTT----------GAGAAAGACA-AAA-----GGAGCAACG-GCTAGGCCCA-----CA-GGGCCTCCATCCTGTCCCGGGGCTGAG--------CAC-------TGAGCAGTGCGGGGA--GA-----------GCTGGGCACGTTC------ACACGTGGAG--------------------------------------------AAGGGACTG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2130840 368 - 2165740 ---GCCTCTTACCTGTGCTGCGACGGTGTGTGACCTGGTAGGAAAGAGCTTTGTAACACATGCTGTATTGAACCCTGCCTCAGAAAGGCCGAAGGCAGCACGCAA-GCCTGCCCCTCCAGCACCCACTACCACTGCATCAAATTCATGATCAACTACCGGATACTGAGCAGAAATCTGAAAAAGAAAAATGTACCTGTCACTCACACATTCAACTATGCCAA-CACAAAGACTGCAGTTCCAGTAAAAGAGCCT----------GAGGAAGA-G-GAA-----GAAGTGACC-ACTGTGCACA-----CA-GTTCCCCC-TTCTATCCCAGAGCTAAG--------CACCAGTCCTTAAACAGTGCTAAGG--GA----------TGGTGGGCACATCC------TCACATACAA--------------------------------------------AAGGGACCA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74343325 343 + 120421639 -CTTTTTCTTACCTGTGCTGCAACAGTATGTGATCGGGTAGGAAAGAGCTTTGTAAGGCATGCAGTATTAAACCCTGCCTCAGAAAGGCCAAATGCAGCTCGCAA-GCCTGCCCCTCCAGCGCCTACAACCACAGCATCAAATTCATGATCCACCACTGGGTATTGAGTAGAAATCTGAAAAGG--AAATTCAGCTATTTGTTACATATTTAACTTCATAAAACATCAAGACTATAATTACAA---------------------AATAATCACAGGAA-----AGAATAGCT-GCTGTGCACAGAAAGAA-GGCTTTCAATCCTGTTCT-GATCTGAG------------------TGTGCATTCTTGGTGTTGA-----------AGTGTG-------------------GTAC--------------------------------------------AATGAACCA i mm10.chr13 C 0 C 0 s canFam3.chr34 11956972 410 + 42124431 CCTTTCTCTTACCTGGGCGGCAACGGTGTGTGATCTGGTGGGAAAGAGCTTTGTGACGCAGGCCGTGTTAAACCCAGCCTCTGAAAGGCCAAATGCAGCTCGCAA-GCCCGCCCCTCCAGCGCCTACCACCACTGCATCAAATTCATGGTCCACCACTGGGTACTGCGTAGAGATCTGGAAAGGAACAATTCACCTGTCAGCCA-----------------------GGGACTATGGGTGCAGCGGCAGAGTTCAGGCACAACGGAAAGAGGCACAAA-----AGAGCAGCT-GC--GGCAAA-----CAGGGGCCTCCACCCGGCGTATGTGGTGAGGGCAGCCCACC-------CCAACAG-GCCTGCC--AA-----------AGGGACCACACTCATCCCGGCACCTGGAAAGCCCCCCAAGAGCTGAAATGCTGAAGAGGTACAGCCTCAAAGCAAGGAACTG i canFam3.chr34 C 0 I 246 s dasNov3.JH577625 371065 363 - 913073 CTTTTCTCTTACCTGTGCTGCAATAGTGTGTGACCTGGTGGGAAAGAGCTTTGTGACACATGCCGTGTTAAATCCTGCCTCAGAAAGGCCAAATGCAGCACGCAG-ACCTGCCCCTCCAGCGCCCACCACCACTGCATCAAATTCATGATCCACTACTGGATACTGAGTAGAAATCTGGAAAAGAAACATCCACCTGTTATCCACATATTC----------AACAGTAGAACTGTGGTTACAGTGAAATAGCTT----------GGAGAAAATT-AAAGTCATGAAGTAAC--ACGAAATAAA-----AG-AG-----CATCCTGTCCTGGGACTGAG--------CCT-------C--ACAGCACAAAAA--GGTTGAGGTATGTGGTGGGTACATTC-------TATATCAAA--------------------------------------------GAAGGACCA i dasNov3.JH577625 I 958 C 0 e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=288934.000000 s hg38.chr3_KI270934v1_alt 130583 37 + 163458 ATAATCAGATTCTATGAATGGTAGAGGG----------------------------------------------------------------------------TCTATTCCA s panTro5.chr3 2595734 37 - 202621043 ATAATCAGATTCTATGAATGGTAGAGGG----------------------------------------------------------------------------TCTATTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 183328 37 - 190779 GTAATCAGATTCTATGAATGGTAGAGGG----------------------------------------------------------------------------TCTATTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 23511 37 + 880730 ATAATCAGATTCTATGAATGGTAGAGGG----------------------------------------------------------------------------TCTATTCCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179854285 37 - 180051392 ACAATCAGATTCTATGAATGGTAGAGGG----------------------------------------------------------------------------TCTGTCCCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1323350 37 + 181584905 ACAATCAGATTCTATGAATGGTAGAGGG----------------------------------------------------------------------------TCTGTCCCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 78415 37 + 100774 ACAATCAGATTCTATGAATGGTAGAGGG----------------------------------------------------------------------------TCTGTCCCA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1416503 39 + 91010382 ACAATCAGATTCTATGAATGGTAGAGGG--------------------------------------------------------------------------GATCTGTCCCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 898785 37 - 930449 ACAATCAGATTCTATGAATGGTAGAGGG----------------------------------------------------------------------------TCTGTCCCA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 816699 113 - 1687011 ACAATCAGATTCTATGAACGGTAGAGGGTCTGTCGCGTGGGATCAGACTGGGAACCACAACTCTACTTCAGGACTGACAATCCGATTCTATGAACGGTAGAGAGTCTGTCCTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204169849 37 + 204313951 ACAATCAGATTCTATGAATGGTAGAGGG----------------------------------------------------------------------------CCTAGCCCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16311671 37 + 16417988 ACAATCAGATTCCATGAATGGTAGAGGG----------------------------------------------------------------------------CCCAGCCCA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 99495 37 - 306014 ACAATCAGATTCTATGAATGGTAGAGGG----------------------------------------------------------------------------CCTAGCCCA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 142347 37 - 211231 ACAATCAGATTCTACGAATGGCAGAGGG----------------------------------------------------------------------------CCTAGCCCA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2131208 37 - 2165740 AGAGCCAGATTTTATAAATGACAGTGAG----------------------------------------------------------------------------TCTATCCCA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74343668 37 + 120421639 GCAGTCAGACTTCATGAACAATAGATGG----------------------------------------------------------------------------ACTGCTaca i mm10.chr13 C 0 I 504 s dasNov3.JH577625 371428 35 - 913073 ACATGCAGATCCCATCAACATTAAAG------------------------------------------------------------------------------TCTGTCCTG i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 11957382 246 + 42124431 I e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=74756.000000 s hg38.chr3_KI270934v1_alt 130620 9 + 163458 TGGGATCAG s panTro5.chr3 2595771 9 - 202621043 TGGGATCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 183365 9 - 190779 TGGGATCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 23548 9 + 880730 TGGGATCAG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179854322 8 - 180051392 T-GGATCAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1323387 8 + 181584905 T-GGATCAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 78452 9 + 100774 TGGGATCAG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1416542 9 + 91010382 TGGGATCAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 898822 9 - 930449 CGGGATGAG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 816812 9 - 1687011 TGGGATCAG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204169886 9 + 204313951 TGGGATCAG i calJac3.chr2 C 0 I 362 s saiBol1.JH378155 16311708 9 + 16417988 TGGGATCAG i saiBol1.JH378155 C 0 I 368 s cebCap1.NW_016108150v1 99532 9 - 306014 TGGGATCAG i cebCap1.NW_016108150v1 C 0 I 368 s aotNan1.NW_018494784v1 142384 9 - 211231 TGGGATCAG i aotNan1.NW_018494784v1 C 0 I 436 s otoGar3.GL873745 2131245 9 - 2165740 CGGGACCAG i otoGar3.GL873745 C 0 I 488 s dasNov3.JH577625 371463 9 - 913073 TGGAGCCAG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74343705 504 + 120421639 I e canFam3.chr34 11957382 246 + 42124431 I e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=12660.000000 s hg38.chr3_KI270934v1_alt 130629 6 + 163458 -----------------------------ACTGAG------------------------------------------- s panTro5.chr3 2595780 6 - 202621043 -----------------------------ACTGAG------------------------------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 183374 6 - 190779 -----------------------------ACTGAG------------------------------------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 23557 6 + 880730 -----------------------------ACTGAG------------------------------------------- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179854330 6 - 180051392 -----------------------------ACTGAG------------------------------------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1323395 6 + 181584905 -----------------------------ACTGAG------------------------------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 78461 6 + 100774 -----------------------------ACTGAG------------------------------------------- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1416551 6 + 91010382 -----------------------------ACTGAG------------------------------------------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 898831 6 - 930449 -----------------------------ACTGAG------------------------------------------- i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 816821 6 - 1687011 -----------------------------ACTGGG------------------------------------------- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204170257 6 + 204313951 -----------------------------ACTGAG------------------------------------------- i calJac3.chr2 I 362 C 0 s saiBol1.JH378155 16312085 6 + 16417988 -----------------------------ACTGAG------------------------------------------- i saiBol1.JH378155 I 368 C 0 s cebCap1.NW_016108150v1 99909 6 - 306014 -----------------------------ACTGAG------------------------------------------- i cebCap1.NW_016108150v1 I 368 C 0 s otoGar3.GL873745 2131742 6 - 2165740 -----------------------------ATTAAA------------------------------------------- i otoGar3.GL873745 I 488 C 0 s dasNov3.JH577625 371472 78 - 913073 GAAATCTACCATCAGTTGAAATGTTGAAAACTTAAAGGTACACCCTCAAAAAAATGTTTGTAAAAGCTAAACCATTAA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74343705 504 + 120421639 I e aotNan1.NW_018494784v1 142393 436 - 211231 I e canFam3.chr34 11957382 246 + 42124431 I e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=95596.000000 s hg38.chr3_KI270934v1_alt 130635 12 + 163458 GACCACAACTCT s panTro5.chr3 2595786 12 - 202621043 GACCACACCTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 183380 12 - 190779 GACCACACCTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 23563 12 + 880730 GACCACAACTCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179854336 12 - 180051392 GACCACAACTCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1323401 12 + 181584905 GACCACAACTCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 78467 12 + 100774 GACCACAACTCT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1416557 12 + 91010382 GACCACAACTCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 898837 12 - 930449 GGCCACAACTCT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 816827 12 - 1687011 AACCACAACTCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204170263 12 + 204313951 GACCCCAGCTCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16312091 12 + 16417988 GACCCCGGCTCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 99915 12 - 306014 GACCCCAGCTCT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2131748 11 - 2165740 AACCACA-CTAT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74344209 12 + 120421639 GACCACAACTAT i mm10.chr13 I 504 C 0 s dasNov3.JH577625 371550 12 - 913073 GACCCCAATTCT i dasNov3.JH577625 C 0 I 190 e aotNan1.NW_018494784v1 142393 436 - 211231 I e canFam3.chr34 11957382 246 + 42124431 I e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=44415.000000 s hg38.chr3_KI270934v1_alt 130647 5 + 163458 ACTTC s panTro5.chr3 2595798 5 - 202621043 ACTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 183392 5 - 190779 ACTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 23575 5 + 880730 ACTTC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179854348 5 - 180051392 ACTTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1323413 5 + 181584905 ACTTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 78479 5 + 100774 ACTTC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1416569 5 + 91010382 ACTTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 898849 5 - 930449 ACTTC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 816839 5 - 1687011 ACTTC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204170275 5 + 204313951 ACCTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16312103 5 + 16417988 ACTTC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 99927 5 - 306014 ACTTC i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2131759 5 - 2165740 GCTTC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74344221 5 + 120421639 ATTTC i mm10.chr13 C 0 C 0 e aotNan1.NW_018494784v1 142393 436 - 211231 I e dasNov3.JH577625 371562 190 - 913073 I e canFam3.chr34 11957382 246 + 42124431 I e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=210249.000000 s hg38.chr3_KI270934v1_alt 130652 32 + 163458 AGGGCCGT-------------GCCTATG--------CTTATGCCTGAGAAGGT s panTro5.chr3 2595803 32 - 202621043 AGGGCCGT-------------GCCTATG--------CTTATGCCTGAGAAGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 183397 32 - 190779 AGGGCCGT-------------GCCTATG--------CTTATGCCTGAGAAGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 23580 32 + 880730 AGGGCCGT-------------GCCTATG--------CTTATGCCTGAGAAGGA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179854353 32 - 180051392 AGGGCCGC-------------GCCTCTG--------CTTATGCCTGAGAAGGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1323418 32 + 181584905 AGGGCCGC-------------GCCTCTG--------CTTATGCCTGAGAAGCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 78484 32 + 100774 AGGGCCAC-------------GCCTCTG--------CTTATGCCTGAGAAGGT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1416574 32 + 91010382 AGGGCCAT-------------GCCTATG--------CTTATGCCTGAGAAGGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 898854 32 - 930449 AGGGCCGC-------------GCCTGTG--------CTTATGCCTGAGAAGGT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 816844 32 - 1687011 AGGGCCAG-------------GCCTATG--------CTTATGGCTGAGAAGGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204170280 32 + 204313951 AGGGCCGT-------------GCCTATG--------CTCATAGCTGAGAAGGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16312108 32 + 16417988 AGGGCCAT-------------GTCTATG--------CTCACAGCTGAGAAGGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 99932 32 - 306014 AGGGCCAT-------------GTCTATC--------CTCATAGCTGAGAAGGT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2131764 30 - 2165740 AGGCCCAT-------------GTCTTT----------TTATGACTGAAAAGGT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74344226 53 + 120421639 AAGTTTATATTTAAGGAGAAGGTCTGTGTGCGAAGATTTATTGCTGAGAAATT i mm10.chr13 C 0 C 0 s canFam3.chr34 11957628 32 + 42124431 AGGAATGG-------------AACCCTG--------AGTTTGACTGAGAAGGT i canFam3.chr34 I 246 C 0 e aotNan1.NW_018494784v1 142393 436 - 211231 I e dasNov3.JH577625 371562 190 - 913073 I e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=211377.000000 s hg38.chr3_KI270934v1_alt 130684 34 + 163458 ACCAAGGAGCATTCAGTCGCTATTGTGAGCTTAT s panTro5.chr3 2595835 34 - 202621043 GCCAAGGAGCATTCAGTCGCTGTTGTGAGCTTAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 183429 34 - 190779 GCCAAGGAGCATTCAGTCGCTATTGTGAGCTTAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 23612 34 + 880730 GCCAAGGAGCATTCAGTCGCTATTGTGAGCTTAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179854385 34 - 180051392 GCCAAGGAATATTCAGTCGCTATCGTGAGCTTAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1323450 34 + 181584905 GCCAAGGAGCATTCAGTCGCTATCGTGAGCTTAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 78516 34 + 100774 GCCAAGGAGTATTCAGTCGCTATCGTGAGCTTAC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1416606 34 + 91010382 GCCAAGGAGTATTCAGTCGCTATTGTGAGCTTAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 898886 33 - 930449 GCCAAGGAGCATTCAGTCGCTATTGTGAGC-TAC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 816876 34 - 1687011 GCCAAGGAGTATTCAGTCGCTATTGTGAGCTTAT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204170312 34 + 204313951 GCCATGGAGTATTCAGTTGCTATCAGGAGCAGAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16312140 34 + 16417988 GCCACGGAGTATTCAGTCGCTATCGTGAGCAGAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 99964 34 - 306014 GCCATGGAGTATTCAGTCGCTATCATGGGCAGAA i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2131794 27 - 2165740 ACTAAGTAGTATTAAAAC-TTACCTTGT------ i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74344279 33 + 120421639 GTCAAGCAATATTCTATAACC-TTACTAGTTCAT i mm10.chr13 C 0 C 0 s canFam3.chr34 11957660 33 + 42124431 ACCAC-CAGCATTCAGTAACTACTGTGAGCTTAT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 371752 34 - 913073 ACCTAGGCATATCCAGTTTGTCTGGTGACCACCT i dasNov3.JH577625 I 190 C 0 e aotNan1.NW_018494784v1 142393 436 - 211231 I e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=543030.000000 s hg38.chr3_KI270934v1_alt 130718 78 + 163458 --------GAGAAAAGAACTT---CTCAG---CACGTTTC--AGT-T-TTCCAACAGAGAG-------AGAACAGGCACACTCAATAC-----------------------------------------CAAGGAACCCACACC------------------ s panTro5.chr3 2595869 78 - 202621043 --------GAGAAAAGAACTT---CTCAG---CAAGTTTC--AGT-T-TTCTAACAGAGAG-------AGAACAGGCACACTCAATAC-----------------------------------------CAAGGAACCCACACC------------------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 183463 78 - 190779 --------GAGAAAAGAACTT---CTCAG---CAAGTTTC--AGT-T-TTCCAACAGAGAG-------AGAACAGGCACACTCAATAC-----------------------------------------CAAGGAACCCACACC------------------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 23646 78 + 880730 --------GAGAAAAGAACTT---CTCAG---CAAGTTTC--AGT-T-TTCCAACAGAGAG-------AGAACAGGCACACTCAATAC-----------------------------------------CAAGGAACCCACACC------------------ i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179854419 76 - 180051392 --------GAGAAAAGAACTT---CTCAG---CAAGTTTC--AGT-T-TTCCAAC--AGAG-------AGAACAGGCACGCCAAATAC-----------------------------------------CAAGGAACCCACACC------------------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1323484 76 + 181584905 --------GAGAAAAGAACTT---CTCAG---CAAGTTTC--AGT-T-TTCCAAC--AGAG-------AGAACAGGCACGCCAAATAC-----------------------------------------CAAGGAACCCACACC------------------ i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 78550 76 + 100774 --------GAGAAAAGAACGT---CTCAG---CAAGTTTC--AGT-T-TTCCAAC--AGAG-------AGAACAGGCACGCCAAATAC-----------------------------------------CAAGGAACCCACACC------------------ i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1416640 78 + 91010382 --------GAGAAAAGAACTT---CTCAG---CAAGTTTC--AGT-T-TTCCAACAGAGAG-------AGAACAGGTACACTAAATAC-----------------------------------------CAAGGAACCCACACC------------------ i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 898919 76 - 930449 --------GAGAAAAGAACTT---CTCAG---CAAGTTTC--AGT-T-TTCCAAC--AGAG-------AGAACAGGCACGCCAAATAC-----------------------------------------CAAGGAACCCACACC------------------ i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 816910 78 - 1687011 --------GAGAAAAGAACTT---CTCAG---CAAGTTTC--AGT-T-TTCCAACAGAGAG-------AGAACAGGCACACTGAATAC-----------------------------------------CAAGGAACCCACACC------------------ i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204170346 75 + 204313951 --------GAGAAAAGAACTT---CTCAG---CAAGCTTC--AGT-T-TTCCAACAGAGAG-------AGAACACGCACACCGAATAC-----------------------------------------CAAAGAA---ATACC------------------ i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16312174 74 + 16417988 --------GGGAAAAGAACTT---CTCAG---CAAGCTTC--AGT-T-TTCCAAC----AG-------AGAACACGCACACCAAATAC-----------------------------------------CAAAGAACCCACAAC------------------ i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 99998 78 - 306014 --------GAGAAAAGAACTT---TTCAG---CAAGCTTC--AGT-T-TTCCAACAGAGAG-------AGAATATGTACACTAAATAC-----------------------------------------CAAAGAGCCCACAAC------------------ i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 142829 78 - 211231 --------GAGAAAAGAACTT---CCCAG---CAAGCTTC--AGT-T-TTCCAACAGAGAG-------AGAACATGCACACCAAATAC-----------------------------------------CAAAGAACCCACACC------------------ i aotNan1.NW_018494784v1 I 436 I 31 s otoGar3.GL873745 2131821 61 - 2165740 --------------------------GAA---CAAAGTTC--ATT-TGTTTCAACA-AAGT-------AGAACTGGTACACTAAATAC-------------------------------------------AATAATCTATATC------------------ i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74344312 77 + 120421639 --------ATGATAAAAACTT---GTGAG---TAATGTTCGTATT-T-TTTAAACAGAAAG-------CAAAAGAG---GCTAAATAC-----------------------------------------AGAGGAGTCTCAACT------------------ i mm10.chr13 C 0 C 0 s canFam3.chr34 11957693 79 + 42124431 --------GAGAAAACAACCT---GTGAA---CACATTTT--AGTGT-CTTCAGCAGAGAA------TAAGATGGGACCGGTAAACAC------------------------------------------AGAGAGCCTACACT------------------ i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 371786 158 - 913073 GAACACTGAGGAGTACAGCTCTAGTTCAGGCCCATGCCTG--TGT-T-CACAAGCAAGGAGGTGCAGGGCAGTAGTTACAGTAACTGCTGTGGGTTTGGGAAAAGAGAGCCTGTGATACGGTAATGCCACAGGAAGCCCACAGGACCTCATGAAGAGCTGCT i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=162924.000000 s hg38.chr3_KI270934v1_alt 130796 31 + 163458 GGAAGGGCCCCACGGTCCTCTTTTCAGTAGG- s panTro5.chr3 2595947 31 - 202621043 GGAAGGGCCCCACGGTCCTCTTTTCGGTAGG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 183541 31 - 190779 GGAAGGGCCCCACGGTCCTCTTTTCGGTAGG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 23724 31 + 880730 GGAAGGGCCCCACAGTCCTCTTTTCAGTACG- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179854495 31 - 180051392 TGAGTGGCCCCACAGTCCTAATTTCAGTAGG- i rheMac8.chr6 C 0 I 1 s macFas5.chr6 1323560 31 + 181584905 TGAGTGGCCCCACAGTCCTCATTTCAGTAGG- i macFas5.chr6 C 0 I 1 s macNem1.NW_012013899v1 78626 30 + 100774 TGAGTGG-CCCACAGTCCTCATTTCAGTAGG- i macNem1.NW_012013899v1 C 0 I 1 s chlSab2.chr4 1416718 31 + 91010382 TGAGTGGCCCCACAGTCCTAATTTCAGTAGG- i chlSab2.chr4 C 0 I 1 s manLeu1.NW_012107609v1 898995 31 - 930449 TGAGTGGCCCCACAGTCCTAATTTCAGTAGG- i manLeu1.NW_012107609v1 C 0 I 1 s colAng1.NW_012116910v1 816988 31 - 1687011 CGAGTGGGCCCACGGTCCTAATTTCAGTAGG- i colAng1.NW_012116910v1 C 0 I 1 s calJac3.chr2 204170421 31 + 204313951 CACATGGCCACACCGTCCTATCTGCAGTGGG- i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 16312248 31 + 16417988 CAAGGGGCCACACAGTCCTATATGCAGTAGG- i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 100076 31 - 306014 CAAGTGGCCACACAGTCCTATTTGCAGTAGG- i cebCap1.NW_016108150v1 C 0 I 1 s otoGar3.GL873745 2131882 18 - 2165740 ------------CAGTCCTATTTGGAGTAG-- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74344389 29 + 120421639 CCAGTGG--CCATAGTCTTATTTTGTGCAGG- i mm10.chr13 C 0 I 1 s canFam3.chr34 11957772 20 + 42124431 GGAGTGGCTTCACAGTTCTA------------ i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 371944 32 - 913073 TGGAAGGCTGCACAGCCCTCTTCAAGGTAGAG i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 142907 31 - 211231 I e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=399458.000000 s hg38.chr3_KI270934v1_alt 130827 42 + 163458 ATTTTATCATCTATCACAGCAG--ATACTGTTCA--------TT---------T-TAATTTA s panTro5.chr3 2595978 42 - 202621043 ATTTTATCATCTATCACAGCAG--ATACTGTTCA--------TT---------T-TAATTTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 183572 42 - 190779 ATTTTATCATCTATCACAGCAG--ATACTGTTCA--------TT---------T-TAATTTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 23755 42 + 880730 ATTTCATCATCTATCACAGCAG--ATACTGTTCA--------TT---------T-TAATTTA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179854527 42 - 180051392 ATTTTATCATCTATCACAGCAG--ATACTGTTCA--------TT---------T-TAATTTA i rheMac8.chr6 I 1 C 0 s macFas5.chr6 1323592 42 + 181584905 ATTTTATCATCTATCACAGCAG--ATACTGTTCA--------TT---------T-TAATTTA i macFas5.chr6 I 1 C 0 s macNem1.NW_012013899v1 78657 42 + 100774 ATTTTATCATCTATCACAGCAG--ATACTGTTCA--------TT---------T-TATTTTA i macNem1.NW_012013899v1 I 1 C 0 s chlSab2.chr4 1416750 42 + 91010382 ATTTTATCATCTAACACAGCAG--ATACTGTTCA--------TT---------T-TATTTTA i chlSab2.chr4 I 1 C 0 s manLeu1.NW_012107609v1 899027 42 - 930449 ATTTTATCATCTATCACAGCAG--ATACTGTTCA--------TT---------T-TATTTTA i manLeu1.NW_012107609v1 I 1 C 0 s colAng1.NW_012116910v1 817020 42 - 1687011 ATTTTATCATCTATCACAGCAG--ATACTGTTCA--------TT---------T-TATTTTA i colAng1.NW_012116910v1 I 1 M 860 s calJac3.chr2 204170453 42 + 204313951 ATCTTATCATCTGTCACAGCAG--ACACTGTTCA--------TT---------T-TACTTTA i calJac3.chr2 I 1 I 5 s saiBol1.JH378155 16312280 42 + 16417988 ATTTTATCATCTATCACAGCAG--ACACtgttca--------tt---------t-tatttta i saiBol1.JH378155 I 1 I 5 s cebCap1.NW_016108150v1 100108 42 - 306014 ATTTTATCATCTATCACAGCAG--ACACCGTTCA--------TT---------T-TATTTTA i cebCap1.NW_016108150v1 I 1 I 5 s aotNan1.NW_018494784v1 142938 41 - 211231 ATTTTATCATCCATCGCAGCAG--GTAC-ATTCA--------TT---------T-TATTTTA i aotNan1.NW_018494784v1 I 31 I 5 s otoGar3.GL873745 2131900 43 - 2165740 ATTTTACCATCTGCCACAGCAA--ATGCTAttca--------tt---------tgtatttta i otoGar3.GL873745 C 0 I 8 s mm10.chr13 74344419 46 + 120421639 ATTCCACAGTTCATCACAGCAT--ATACAGCTCA--------TTAATA-----T-TTTCTTA i mm10.chr13 I 1 C 0 s canFam3.chr34 11957792 46 + 42124431 ----TGtcactcgtcacagtaa--ataatgttcatctgtcattt---------t-cattcta i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 371976 48 - 913073 ATTTTATCA-----CACTGTAGTAATACTCCTCA--------CTGGCACttggt-tattttg i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=3619717.000000 s hg38.chr3_KI270934v1_alt 130869 513 + 163458 TTGCTTTA---CTTGAC-CTAAATTTAAA-TCTAATTTATAGATACA-TAACAGATACAAGTAAAAA-TGTTAACATCTATGTTTATATTGGTACTTGCAATTAAGTATTATTACACTGAAAATAATTTCAGCATGCATTGGATACCT---ATGAGAAATTTTTCCCT-------TA---------TGTCTATGA-CTC--A----TATG-------------------------AAAACAA----------------------ACTGGTATAGATCCTTAC--CCC--CAA-----------------------------------------------------------GCC-------------------------------------------AAAAAAA--TCATTT-ATAATGGAACAAAAAG--CATGAACTTACGGAATCTGAAACTTTAGCAGATGCCCTCTCGTTCCT-TCAACAGTGAAGTGAACACCTCGGGTTCCTGTTTGCAACACTGTTGGCCACTGGAGACACAGAAGACACAGATCCAGAGGGTT-AGTGTCCTGAAGG----AACAAATGCTGTGGGGGATAGTAATTCAAACTTCCCCTTGAAAACTGTTCACCTTCTTATGTACCCAGGTGCT-CCTGTGCATCCAGAGAGCTCAG--CTGGGACCCT------CTATT----TAACCCTGAAGGGCAGCCCA s panTro5.chr3 2596020 509 - 202621043 TTGCTTTA---CTTGAC-CTAAATTTAAA-TCTAATTTATAGATACA-TAACAGATACAAGTAAAAA-TGTTAACATCTATGTTTATATTTGTACTTGCAATTAAGTATTATTACACTGAAAATAATTTCAGCATGCATTGGATACCT---ATGAGAAA--TTTCCCT-------TA---------TGTCTATGATCTC--A----TATG-------------------------AAAACAA----------------------ACT-GTATAGATCTTTA---CCC--CAA-----------------------------------------------------------GCC--------------------------------------------AAAAAA--TCATTT-ATAATGGAACAAAAAG--CATGAACTTACGGAATCTGAAACTTCAGCAGATGCCCTCTCGTTCCT-TCAACAGTGAAGTGAACACCTCGGGTTCCTGTTTGCAACACTGTTGGCCACTGGAGACACAGAAGACACAGATCCAGAGGGTT-AGTGTCCTGAAGG----AACAGATGCTGTGGGGGATAGTAATTCAAACTTCCCCTTGCAAACTGTTCACCTTCTTATGTACCCAGGTGCT-CCTGTGCATCCAGAGAGCTCAG--CTGGGACCCT------CTACT----TAACCCTGAAGGGCAGCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 183614 512 - 190779 TTGCTTTA---CTTGAC-CTAAATTTAAA-TCTAAtttatagataca-taacagatacaagtaaaaa-tgttaacatctatgtttatatttgtacttgcgattaagtattattacactgaaaataatttcagcatgcattggatacct---atgagaaatttttccct-------ta---------TGTCTATGA-CTC--A----TATG-------------------------AAAACAA----------------------ACTGGTATAGATCCTTA---CCC--CAA-----------------------------------------------------------GCC-------------------------------------------AAAAAAA--TCATTT-ATAATGGAACAAAAAG--CATGAACTTACGGAATCTGAAACTTCAGCAGATGCCCTCtcgttcct-tcaacagtgaagtgaacacctcgggttcctgtttgcaacactgttggccactggagacacagaagacacagatccagagggtt-agtgtcctcaagg----aacagatgctgtgggggaTAGTAATTCAAACTTCCCCTTGCAAACTGTTCACCTTCTTATGTACCCAGGTGCT-CCTGTGCATCCAGAGAGCTCAG--CTGGGACCCT------CTACT----TAACCCTGAAGGGCAGCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 23797 513 + 880730 TTGCTTTA---CTTGAC-CTAAATTTAAA-TCTAGTTTATAGATACA-TAAGAGATACAAGTAAAAA-TGTTAACATCTATGTTTATGTTTTTACTTGCAATTAAGTATTATTACACTGAAAATAATTTCAGCATGAATTGGATACCT---ATGAGAAATTTTTCCCT-------TA---------TGTCTATGA-CTC--A----TATG-------------------------AAAACAA----------------------ACTGGTATAGATCCTTAC--CCC--CAA-----------------------------------------------------------GCC-------------------------------------------AAAAAAA--TCATTT-ATAATGGAACAAAAAG--CATGAACTTACGGAATCTGAAACTTCTGCAGATGCCCTCTTGTTCCT-TCAACAGTGAAGTGAAAACCTCGGGTTCCTGTTTGCAACACTGTTGGCCACTGGAAACAGAGAAGACACAAATCCAGAGGGTT-AGTGCCCTGAAGG----AACAAATGCTGTGGGGGATAGTAATTCAAATTTCCCCTTGCAAACTGTTCACCTTCTTCTGTACCCAGGTGCT-CCTGTGCATCCAGAGAGCTCAG--CTGGGACCCT------CTACT----TAACCCTGAAGGGCAGCCCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179854569 515 - 180051392 TTGCTTTA---CTTGAT-CTAAATTTAGA-TCTAGTTTATAGATACATTAAGAGATATAAGTAAAAA-TGCTAACATCTATGTTTGTGTTTGTACTTGCAATTGATTATTATAACACTGAAAATAATTTCAGCATGTGTTGGACACC-----TGAGAAATTTTTCTCT-------TA---------TGTCTATGA-CTC--A----TATG-------------------------AAAAGAA----------------------ACTGGTACAGATCCTTAC--CCC--CAA-----------------------------------------------------------GCCA------------------------------------------AAAAAAA--TCATTTAATAATGGAACAAAAAG--CATGAACTTACGGAATCTGAAACTTTAGCAGATGCCCTCTTGTTCCCATCAACAGTGAAGTGAAAACCTCGGGTTCCTGTTTGCAACACTGCTGGCCACTGGTGACACAGAAGACACAGATGCAGAGGGTT-AGTGTCCTGAAGG----AACAGATGCTATGGGGGACAGTAATTTAAACTTCCCCTTGCAAACTGTTCCCCTTCTTAGGTACCCAGGTGCT-CCTGTGCATCCAGGGAGCTCAG--CTGGGACTCT------CCACT----TAACCCTGAAGGGCAGCCCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1323634 514 + 181584905 TTGCTTTA---CTTGAT-CTAAATTTAGA-TCTAGTTTATAGATACATTAAGAGATATAAGTAAAAA-TGCTAACATCTATGTTTGTGTTTGTACTTGCAATTGATTATTATAACACTGAAAATAATTTCAGCATGTGTTGGACACC-----TGAGAAATTTTTCTCT-------TA---------TGTCTATGA-CTC--A----TATG-------------------------AAAAGAA----------------------ACTGGTACAGATCCTTAC--CCC--CAA-----------------------------------------------------------GCCA------------------------------------------AAAAAAA--TCATTT-ATAATGGAACAAAAAG--CATGAACTTACGGAATCTGAAACTTTAGCAGATGCCCTCTTGTTCCCATCAACAGTGAAGTGAAAACCTCGGGTTCCTGTTTGCAACACTGCTGGCCACTGGTGACACAGAAGACGCAGATGCAGAGGGTT-AGTGTCCTGAAGG----AACAGATGCTATGGGGGACAGTAATTTAAACTTCCCCTTGCAAACTGTTCCCCTTCTTAGGTACCCAGGTGCT-CCTGTGCATCCAGGGAGCTCAG--CTGGGACTCT------CCACT----TAACCCTGAAGGGCAGCCCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 78699 486 + 100774 TTGCTTTA---CTTGAT-CTAAATTTAGA-TCTAGTTTATAGATACATTAAGAGATATAAGTAAAAA-TGCTAACATCTATGTTTGTGTTTGTACTTGCAATTAAGTATTACTACACTGAAAATAATTTCAGCATGCATTGGACACCT---ATGAGAAATTTTTCTCT-------TA---------TGTCTATGA-CTC--A----TATG-------------------------AAAAGAA----------------------ACTGGTACAGATCCTTAC--CCC--CAA-----------------------------------------------------------GCCA------------------------------------------AAAAAAA--TCATTT-AATATGGAACAAAAAG--CATGAACTTACGGAATCTGAAACTTTAGCAGATGCCCTCTTGTTCCCATCAACAGTGAAGTGAAAACCTCGGGTTCCTGTTTGCAACACTGCTGGCCACTGGTGACACAGAAGACGCAGATGCAGAGGGTT-AGTGTCCTGAAGG----AACAGATGCTATGGGGGACAGTAATTTAAACTTCCCCTTGCAAA-------------------------------CTGTGCATCCAGGGAGCTCAG--CTGGGACTCT------CCACT----TAACCCTGAAGGGCAGCCCA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1416792 514 + 91010382 TTGCTTTA---CTTGAT-CTAAATTTAAA-TCTAGTTTATAGACACA-TAAGAGATATAAGTAAAAA-TGTTAACATCTATGTTTGTGTTTGTACTTGCAATTGATTATTATAACACTGAAAATAATTTCAGCATGCGTTGGATACCT---ATGAGGAATTTTTCTCT-------TA---------TGTCTATGA-CTC--A----TATG-------------------------AAAAGAA----------------------ACTGGTACAGATCCTTAC--CCC--CAA-----------------------------------------------------------GCC-------------------------------------------AAAAAAA--TCATTT-ATAATGGAACAAAAAG--CATGAACTTACGGAATCTGAAACTTTATCAGATGCCCTCTTGTTCCCATCAATAGTGAAGTGAAAACCTCAGGTTCCTGTTTGCAACACTGTTGGCCACTGGTGACACAGAAGACACAGATGCAGAGGGTT-AGTGTCCTGAAGG----AACAGATGCTATGGGGGACAGTAATTTAAACTTCCCCTTGCAAACTGTTCCCCTTCTTATGTACCCAGGTGCT-CCTGTGCATCCAGGGAGCTCAG--CTGAGACTCT------CTACT----TAACCCTGAAGGGCAGCCCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 899069 512 - 930449 TTGCTTTA---CTTGAT-CTAAATTTAAA-TCTAGTTTATAGATACATTAAGAGATATAAG-AAAAA-TGCTAACATCTATGTTTGTGTTTGTACTTGCAATTAAGTATTACTACACTGAAAATAATTTCAGCATGCATTGGACACCT---ATGAGAAATTTTTCTCT-------TA---------TGTCTATGA-CTC--A----TATG-------------------------AAAAGAA----------------------ACTGGTACAGATCCTTAC--CCC--CAA-----------------------------------------------------------GCC--------------------------------------------AAAAAA--TCATTT-ATAATGGAACAAAAAG--CATGAACTTACAGAATCTGAAACTTTAGCAGATGCCCTCTTGTTCCCATCAACAGTGAAGTGAAAACCTCGGGTTCCTGTTTGCAACACTGCTGGCCACTGGTGACACA-AAGACACAGATGCAGAGGGTT-AGTGTCCTGAAGG----AACAGATGCTATGGGGGACAGTAATTTAAACTTCCCCTTGCAAACTGTTCCCCTTCTTAGGTACCCAGGTGCT-CCTGTGCATCCAGGGAGCTCAG--CTGGGACTCT------CTTCT----TAACCCTGAAGGGCAGCCCA i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 204170500 501 + 204313951 TTGCTTTA---CTTGAT-CTAAATGGAAA-TCTAGTTTACAGATACA-TACAAGATATAAGTACAAA-TGTTAGCACCTATGTTTATGCTTGTACCTGCA-------ATTATTACACTGAAAATCATTTGAGCATGCACTGGATGCCT----TGAGAA---TTCCTCT-------TA---------TGTCTATGA-CTC--A----TATG-------------------------GAAACAA----------------------ACTGGTATAGATCCCTCC--CCC--CAA-----------------------------------------------------------GCC-------------------------------------------AAAAAAA--TCATTT-ATAATGGAACAAAAAG--CATGAACTTACGGATTCTGAAACTTTAGCAGATGCCCTCTTGTTCCCATCCACAGTGAAGTGAAAACCTCGGGTTCCCGTTGGTGACACTGCTGGCCACTGGAGACACAGAAGACACAGATCCAGAGGGTC-AGTGTCCTGAAGG----AACAAATGCTGGGGGGA--TATAATTCAAATTCTGCCTTGCAAACTGGTCACCTTTTTATGTACCCAGGGGCT-CCTGTGCATCCAGAGAGTTCAG--CTGGAACCCT------CTACT----TAACCCTGAAGGGCAGCCCA i calJac3.chr2 I 5 C 0 s saiBol1.JH378155 16312327 503 + 16417988 ttgcttta---cttgat-ctaaattgaaa-tctagcttacagataca-tacaagatgtaagtacaaa-tgttaacacctatgcttatgtttgtacttgca-------attattacactgaaaatcatttgagcatgcacagggtgcct---acgagaattttttctct-------ta---------TGTCTATGA-CTC--A----TATG-------------------------GAAACAA----------------------ACTGCTATCGA--CCTCC--CCG--TAA-----------------------------------------------------------GCCA------------------------------------------AAAAAAA--TCACTT-ATAATGGAACAAAAAG--CACGAACTCACGGATTCTGAGACTTTAGCAGATGCCCTCTTGTTCCCATCAACAGCGAAGTGAAAGCCTCGGGTCCCTGCTGGTGACACCACTGGCCACTGGAGACACAGAAGACACAGATCCAGAGCGTT-AGTGTCCTGAAGG----AACAAATGCTGTGGGGA--CAGAATTCGAATTCTGCCTTGCGAACTGTTCACCTCTGTATGTACCCAGGTGCT-CCCGTGCATCCAGAGGGCTCCG--CCGGGACTCT------CGACT----TAACCC-GAAGGGCGGCCCA i saiBol1.JH378155 I 5 C 0 s cebCap1.NW_016108150v1 100155 503 - 306014 TTGCTTTA---CTTGAT-CTAAATTGAAA-TCTAGTTTATAGGTACA-TACAAGATATAAGTACAAA-TGTTAACACCTATGTTTATGTTTGTACTTGGA-------ATTATTACACTGAAAATCATTTGAGCATGCAC--GATGCCT---ATGAGAATTTTTTCTCT-------TA---------TGTCTATGA-CTC--A----TATG-------------------------GAAACAA----------------------ACTGGTATAGATTCCTCC--CTG--TAA-----------------------------------------------------------GCC-------------------------------------------AAAAAAA--TCATTT-ATAATGGAACAAAAAG--CATGAACTTACGGATTCTGAAACTTTAGCAGATGCCCTCTTGTTCCCATCAACAGTGAAGTGAAAACCTCGGGCTCCTGTTGGTGACACTGCTGGCCACTGGAGACACAGAAGACACAAATCCAGAGGGTT-AGTGTCCTGAAGG----AACAAATGCTCTGGGGA--CAGAATTCAAATTCTGCCTTGCAAACTGTTCATCTTTTTATGTACCCAGGTGCT-CCCGTGCATCCAGAGGGCTCAG--CTGCGACCCT------CTACT----TAACCCTGAAGGGCAGCCCA i cebCap1.NW_016108150v1 I 5 C 0 s aotNan1.NW_018494784v1 142984 502 - 211231 TTGCTTTA---CTTGAT-CTAAATTGAAA-TCTAGTTTATAGACACA-TACAAGATACAAGTACAAA-CGTTAACACCTATGTTTATGTTTGTACTTGCA-------ATTATTACACTG-AAATCATTTGAGCATGCACGGGATGCCC---ATGAGAATTTCTTCTCT-------TA---------TGTCTATGA-GTC--A----TATG-------------------------GAAACAA----------------------ACTGGTATAGATCCCTCC--CC---CAA-----------------------------------------------------------GCC-------------------------------------------AAAAAAA--CCATTT-ATAATGGAACAAAAAG--CACGAACTTACGGATTCTGAAACTTTAGCAGATGCCCTCTTGTTCCCATCAACAGTGAAGTGAAAACCTCGGGTTCCTGTTGTTGACACTGCTGGCCACTGGAGACACAGAAGACACAGATCCAGAGGGTT-AGTGTCCTGAAGG----AACAAATGCTGTGGGGA--TATAATTCAAATTGTGCCTTGCAAACTGTTCACCTTTTTATGTACCCAGGGGCT-CCTGTGCATCCAGAGAGCTCAG--CTGGGACCCT------CGACT----TAACCCTGAA-GGCAGCCCA i aotNan1.NW_018494784v1 I 5 C 0 s otoGar3.GL873745 2131951 517 - 2165740 atgcttta---cttaac-------------tctagtttatagatacg-taaaagctataagcaaaaa-ggttaatatttatgtttatatttctacc-acaattaagtattattgcactaaaaataatctgagcttatactagatgctc---atgagaatcttttctct--ttaaata---------ggcttatta-ctc--aaACGTATT-------------------------AAAATAA----------------------ACTGGTATAGATCATTACTGCTC--TAA-----------------------------------------------------------GCAAAC---------------------------------AACCACCAAAAAAACCCCAATT-ATAATGGAACAAAAAACTCACAAACTTACAGAATCTGACACTTTAGCAGATGCTCTCTTGTACCCATCACCAGTGAAGTGAAAACCTCTGGTTCCTGTCTGGAATGCTGCTGGCCACTGCTG-------AAACACAGA--CTGAGGGTT-AGCATCTTTAAAGCAGCAGCACACTCCATGGGAG-----GAATTGTACTTCTCCCTGTAAACTGTTAA-CTTTTCAGGGGCCCAGCTGCT-CCTGCTCATCCAGAACACTCC---CTGGGACACT------TTGCTCTGCTCGCTCTGCAGGGCAGCA-- i otoGar3.GL873745 I 8 C 0 s mm10.chr13 74344465 611 + 120421639 TTTTGTTA---CTTTAC-TTGAATTTAGAGTTTAGTTT--AGATAAA----GATTTGCCAGCAAAAA-TGTCAGTATTTATGTTAGTATTT----TTGTA-------AGTATTACACTACACAC-ATTTGAGCATACaattaatattttttaaaaaaaatCTTTCCTT---TAAATA---------TGTCCAATA-TTC--A----AATATATTAAAATTAGATCATAATCCTTCAAAACAAGAAACGTTTGCAagctgggcttaatggtgcacacctttaa--tcc--caacagagttagatggatttctgtgagtttgaggccagcctgatctacataacaaatcccaggccagccagagctacatagcgagacattgacttgaataaaacaaaaACAAAAA--TTGTTT-ATAATTGAGCATTAAA--------CTTACTGCATCTGAAACTTTAGCTGATGCCTTCTTGTTCTCACCAACAGAGAAGTGAAAGCCGCAGGTCTGTTTTTGGAGTGTTCCTGGCCACTGCAGGGAAATAA-----------ACAGTGTT-AG-GTCTTGAAG-----AACAGAAACAGAAGG----AATGAATTAGAATTTTCCTTCTAAATTGTTAACTTTCCTATATATCAAGTTGTT-TTCATTCTTGTAGAAAGTTTAC--CTGGGACCCTG----ACTA-------------------------- i mm10.chr13 C 0 C 0 s canFam3.chr34 11957838 502 + 42124431 ttattttgtgctttgat-tgaaagtttac-tctggttt-tagatacc-tacaaactgcaagcaaaaagtgttaacaactatgcttatatttgtac----aattaagtactat-atgctaaaaataatttgagcat-cattgga--------atgagaattttttcctt-------taaataagaactgtgtgtta-ttccaa----tATA-------------------------CTGA-AA----------------------ACTGGTATAGATCGTTACACCTC--TAA-----------------------------------------------------------GCC-------------------------------------------AATGATA--TCACTT-ATAAGGGAACAAAAAA-TTGTGAACTTACTGAATCTGAAACTTTAGCAGAGGACCTCTTATTCCCATCAATGGTGAAGTGAAAACTGCGGGTGCCTGTCTGCCATGCCGCCGGCCACTGCTG-------AGACACAGATGGAGAGCACTAAGTGTCTTAAACA----------------GGGGACTAGTGACCAAAATTTCCCCTT--AAGTTGTCAACCTCTTCAAGTACCCAGGTGCTCCCCGTTCACCTAGAAAGCTCAG--CTGGGGTTAAGTAGAGGTACT----TAACCCTGAAGGCTAG---- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 372024 472 - 913073 ttgcttca---cttgattttacatttaaa-tctggtttatagataca-ttagagctataagcaaaaa-----aatgtctgtatttatgtttgtacaag-acttaagtatgatc---ctaaaaataatttgtgcatgcacatgatgtcc---aagagaattctttccttaaagagata---------tgtgtatta-ctt--g----aatAT------------------------ATTAGAA----------------------ATTGGTATAGGTCATTAC--CCCGATAA-----------------------------------------------------------ACTC------------------------------------------AGGAAAA--CAAATT-ATAGTGGAA-AAAAGC--TACGAACTCACTGAATCTGAAATTTTAGCAGATGACCTTTTATTTCCATCAACATTGATGTGAAAACCACGTGTTCCAGTTTGGAAAGTTGCCGGCGACTGCTG-------AAACACAAATGTAGAGCATTAAACATCTTGAAGG----AACAGAAATAATA------AATAACACGAGCTG---CTGGGGGGCGGAGCCCCTCCGCA--CACCCAGGGGCT-CCGATTCACACGG---GCTCAGGAATGAGGGC------------------------------------- i dasNov3.JH577625 C 0 C 0 e colAng1.NW_012116910v1 817062 860 - 1687011 M e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=880012.000000 s hg38.chr3_KI270934v1_alt 131382 109 + 163458 AGGGGCAAGG---AAGGACTGAGCC---CCCAGGTCCTCCTTTCCACCCTGACTTGGCACTCTAGAAAA-------CCAGGATGAAGCTTGTTTCC-AAAAAGGATACTC-------------------ACTGACTCAGATA s panTro5.chr3 2596529 109 - 202621043 AGGGGCAAGG---AAGGACTGAGCC---CCCAGGTCCTCCTTTCCACCCTGACTTGGCACTCTAGAAAA-------CCAGGATGAAGCTTGTTTCC-AAAAAGGATACTC-------------------ACTGACTCAGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 184126 110 - 190779 AGGGGCAAGG---AAGGACTGAGCC---CCCAGGTCCTCCTTTCCACCCTGACTTGGCACTCTAGAAAA-------CCAGGATGAAGCTTGTTTCCAAAAAAGGATACTC-------------------ACTGACTCAGATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 24310 108 + 880730 AGGGGCAAGG---AAGGACTGAGCC---CCCAGGTCCTCCTTTCCACCCTGACTTGGCACTCTAGAAAA-------CCAGGATGAAGCTT-TTTCC-AAAAAGGATACTC-------------------ACTGACTCAGATA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855084 108 - 180051392 AGGGGCGAGG---AAGGACGGAGCC---CCC-GGTCCTCCTTTCCGCCCCGACTCAGCACTCTAGAAAA-------CCAGGATGAAGCCTGTTTCC-AAACAGGACACTC-------------------ACGGACTCAGATG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1324148 108 + 181584905 AGGGGCGAGG---AAGGACGGAGCC---CCC-GGTCCTCCTTTCCGCCCCGACTCAGCACTCTAGAAAA-------CCAGGATGAAGCCTGTTTCC-AAACAGGACACTC-------------------ACGGACTCAGATG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 79185 108 + 100774 AGGGGCGAGG---AAGGACGGAGCC---CCC-GGTCCTCCTTTCCGCCCCGACTCGGCACTCCAGAAAA-------CCAGGATGAAGCCTGTTTCC-AAACAGGACACTC-------------------ACGGACTCAGATG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1417306 108 + 91010382 AGGGGCGAGG---AAGGACTGAGCC---CCC-AGTCCTCCTTTCCACCCCAACTCGGCACTCTAGAAAA-------CCAGGATGAAGCCTGTTTCC-AAACAGGATACTC-------------------ACTGACTCAGATA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 899581 108 - 930449 AGGGGCGAGG---AAGGACGGAGGC---CCC-GGTCCTCCTTTCCGCCCCGACTCGACACTCCAGAAAA-------CCAGGATGAAGCCTGTTTCC-AAACAGGACACTC-------------------ACTGACTCAGATA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 817922 108 - 1687011 AGGGGCGAGG---AAGGACTGAGCC---CCC-GGTCGTCCTTTCCACCCCGACTCGGCACTCCAGAAAA-------CCAGGATGAAGCCTGTTTCC-AAACAGGATACTC-------------------ACTGACTCAGATA i colAng1.NW_012116910v1 M 860 C 0 s calJac3.chr2 204171001 108 + 204313951 AGGGGCAAGG---AAGGACTGAGTC---CCCAGTTCCTCCTTTCCA-CCTGACTTAGCACTCTAGAAAA-------TCAGGACGAAGCGTGTTTCC-AAACAGGATACTC-------------------ACTGACTCAGATA i calJac3.chr2 C 0 I 193 s saiBol1.JH378155 16312830 108 + 16417988 AGCGGCGAGG---AAGGACTGGGTC---CCCAGGCCCTCCTTTCCA-CCTGACTAGGCACTCTAGAAAA-------TCAGGACAAAGCGTGTTTCC-GAACAGGATACTC-------------------ACTGACTCAGACA i saiBol1.JH378155 C 0 I 194 s cebCap1.NW_016108150v1 100658 108 - 306014 AGCAGCAAGG---AAGGACTGAGTC---CCCAGGTCCTCCTTTCCA-CCTGACTTGGCACTCTAGAAAA-------TCAGGACAAAGCGTGTTTCC-AAACAGGATACTC-------------------ACTGACTCAGATA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 143486 108 - 211231 AGGGGCAAGG---AAGGGCTGAGGC---CCCAGGTCCCCCTTTCCA-GCTGACTTGGCACTCTAGAAAA-------TCAGGACGAAGCTTGTTTCC-AAACAGGAAACTC-------------------ACTGACTCAGATA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2132468 91 - 2165740 -ACAAACAGC---ATGGACCGAGCC---CTA-GGAGCACATCTCCACTCTGACTTGGGCTCCAAGAAAA-------GC----------------CC-AAACAGGATCCTC-------------------ACTGACTCAGGTA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74345076 100 + 120421639 AGAAAGAGGC---AAAGACTTAGGT---CTT-----GTCCTCTCTA--CTAACTTGGCATTCTAGGAAAGCCTTTTCCAAAAC--AGCCTGTTTCC-CAATAGGGTACT--------------------ACTGACC------ i mm10.chr13 C 0 C 0 s canFam3.chr34 11958340 83 + 42124431 --------GG---AAGGGCTAAA---------------------------GACTTGGCACCCCAGGAAAATCCCT-TCAGGATGAAGCCTGTTTCC-AAACAGGACACTC-------------------ATAGACTCAGACA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 372496 137 - 913073 AGGGGCAAGGGGCAAGAACTTAGCCACACCTGAGGCCCCTTCCCCA-CCAGACTTGACAC-CAAGAAAAGCTGC--CCCAGACTAAATTTGTTTCC-AAAGAGGACATTCTCTGAAATCACCTTAAACTTCTGATTCAGATA i dasNov3.JH577625 C 0 I 1 e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=21757.000000 s hg38.chr3_KI270934v1_alt 131491 5 + 163458 CGAGA s panTro5.chr3 2596638 5 - 202621043 CGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 184236 5 - 190779 CGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 24418 5 + 880730 CGAGA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855192 5 - 180051392 CCACA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1324256 5 + 181584905 CCACA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 79293 5 + 100774 CCACA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1417414 5 + 91010382 CCACA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 899689 5 - 930449 CCACA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818030 5 - 1687011 CGACA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204171302 5 + 204313951 caaaa i calJac3.chr2 I 193 C 0 s saiBol1.JH378155 16313132 5 + 16417988 CAAAA i saiBol1.JH378155 I 194 C 0 s cebCap1.NW_016108150v1 100766 5 - 306014 CAAAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 143594 5 - 211231 CAAAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2132559 5 - 2165740 TAAAA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11958423 5 + 42124431 GGAGA i canFam3.chr34 C 0 I 225 s dasNov3.JH577625 372634 5 - 913073 TAAAA i dasNov3.JH577625 I 1 C 0 e mm10.chr13 74345176 0 + 120421639 C e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=61228.000000 s hg38.chr3_KI270934v1_alt 131496 6 + 163458 TGAAAA s panTro5.chr3 2596643 6 - 202621043 TGAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 184241 6 - 190779 TGAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 24423 6 + 880730 TGAAAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855197 6 - 180051392 TGAAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1324261 6 + 181584905 TGAAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 79298 6 + 100774 TGAAAA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1417419 6 + 91010382 TGAAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 899694 6 - 930449 TGAAAA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818035 6 - 1687011 TGAAAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204171307 6 + 204313951 tgaaaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16313137 6 + 16417988 TGAAAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 100771 6 - 306014 TGaaaa i cebCap1.NW_016108150v1 C 0 I 215 s aotNan1.NW_018494784v1 143599 6 - 211231 tgaaaa i aotNan1.NW_018494784v1 C 0 I 219 s otoGar3.GL873745 2132564 6 - 2165740 TGGAAA i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 372639 6 - 913073 TAGAAA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74345176 0 + 120421639 C e canFam3.chr34 11958428 225 + 42124431 I e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=96602.000000 s hg38.chr3_KI270934v1_alt 131502 18 + 163458 AGACGCACTTCCTCTGGG----- s panTro5.chr3 2596649 18 - 202621043 AGGTGCACTTCCTCTGGG----- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 184247 18 - 190779 AGGTGCACTTCCTCTGGG----- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 24429 18 + 880730 AGGCACACTTCCTCTGGG----- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855203 18 - 180051392 AGGCACACTTCCTCTGTA----- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1324267 18 + 181584905 AGGCACACTTCCTCTGTA----- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 79304 18 + 100774 AGGCACACTTCCTCTGTA----- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1417425 18 + 91010382 AGGCACACTTCCTCTGTA----- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 899700 18 - 930449 AGGCACACTTCCTCTGTA----- i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818041 18 - 1687011 AGGCACACTTCCTCTGTA----- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204171313 18 + 204313951 AGGCACATTTCCCCCGTA----- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16313143 17 + 16417988 AGGCACATTT-CTCTGTA----- i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 2132570 16 - 2165740 --AGACACTTTCTCTGTA----- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74345176 11 + 120421639 -------CTTGCTTTGCA----- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 372645 23 - 913073 AGCCACCCTTCCACTTTAATTGT i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 143605 219 - 211231 I e cebCap1.NW_016108150v1 100777 215 - 306014 I e canFam3.chr34 11958428 225 + 42124431 I e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=26957.000000 s hg38.chr3_KI270934v1_alt 131520 3 + 163458 AAG s panTro5.chr3 2596667 3 - 202621043 AAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 184265 3 - 190779 AAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 24447 3 + 880730 AAG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855221 3 - 180051392 AAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1324285 3 + 181584905 AAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 79322 3 + 100774 AAG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1417443 3 + 91010382 AAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 899718 3 - 930449 AAG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818059 3 - 1687011 AAG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204171331 3 + 204313951 AAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16313160 3 + 16417988 AAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 100992 3 - 306014 AAG i cebCap1.NW_016108150v1 I 215 C 0 s otoGar3.GL873745 2132586 3 - 2165740 AAG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74345187 3 + 120421639 GAA i mm10.chr13 C 0 C 0 s dasNov3.JH577625 372668 3 - 913073 AAT i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 143605 219 - 211231 I e canFam3.chr34 11958428 225 + 42124431 I e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=27621.000000 s hg38.chr3_KI270934v1_alt 131523 8 + 163458 -TCTTCACT s panTro5.chr3 2596670 8 - 202621043 -TCTTCACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 184268 8 - 190779 -TCTTCACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 24450 8 + 880730 -TCTTCACT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855224 7 - 180051392 -TCTT-ATT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1324288 7 + 181584905 -TCTT-ATT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 79325 7 + 100774 -TCTT-ATT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1417446 8 + 91010382 -TCTTAATT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 899721 8 - 930449 -TCTTAATT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818062 8 - 1687011 -TCTTAATT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204171334 8 + 204313951 -TCTTAATT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16313163 8 + 16417988 -TCTTAATT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 100995 8 - 306014 -TCTTAATT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2132589 8 - 2165740 -TCTTAGTT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74345190 6 + 120421639 -TATT-AT- i mm10.chr13 C 0 C 0 s canFam3.chr34 11958653 8 + 42124431 -CCTGAATT i canFam3.chr34 I 225 C 0 s dasNov3.JH577625 372671 5 - 913073 TTTTT---- i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 143605 219 - 211231 I e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1623049.000000 s hg38.chr3_KI270934v1_alt 131531 192 + 163458 TATGCT-ACTTAGTGGAGGAGGGG-AAAGACATCCAGATCGTATTACTGTATGTGGTA---TTTTGCAAATAATGAAGCATTTTAACCGGCTCCATCAGAGCCCTTTCCACAT-TACAGTTCCAATCG-TCCAGGAGGGCTTGCG-GTC--AGTT--CAAAAGGCACTGGACACCTGAATCAGGAGATCTGTATCCTGGAACAG s panTro5.chr3 2596678 191 - 202621043 TATGCT-ACTTAGTGGAGGAGGGG-AAAAACATCCAGATTGTATTACTGTATGTGGTA---TTCTGCAGATAATGAAGCATTTTAACCGGCTCCATCAGAGCCCTTTCCACAT-TACAGCTCCAATCG-TCCAGGAGGGCTTGCG-GTC--AGTT--CAAAAGGCACTGGACA-CTGAATCAGGAGATCTGTATCCTGGAACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 184276 191 - 190779 TATGCT-ACTTAGCGGAGGAGGGG-AAAGACATCCAGATCGTATTACTGTATGTGGTA---TTCTGCAGATAATGAAGCATTTTAACCGGCTCCATCAGAGCCCTTTCCACAT-TACAGTTCCAATCG-TCCAGGAGGGCTTGCG-GTC--AGTT--CAAAAGGCACTGGACA-CTGAATCAGGAGATCTGTATCCTGGAACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 24458 192 + 880730 TATGCT-ACTTAGTGGAGGAGGGGAAAAGACATCCAGATCGTATTACTGTATGTGGTA---TTTTGCAAATAATGAAGCATTTTAACTGGCTCCATCAGAGCCCTTTCCACAT-TACAGTTCCAATCG-TCCAGGAGGGCTTGCG-GTC--AGCT--CAAAAGGCACTGGACA-CTGAATCAGGAGATCTGTATCCTGGAACAG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855231 188 - 180051392 TAT-CT-ACTTAGTGGAGAA-GGG--AAGACATCTATATCGTATTACTGTATGTGGTA---TTTTGCAAGTAATGAAGCATTTTAACTGGCTCCAGCATAGCCCTTTCCACAT-TACAGTTCCAGTCG-TCCATGAGGGCTtgtg-gtc--agtt--caaaaggcactggaca-ctgaatcaggagatctgtattcTGGAGCAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1324295 188 + 181584905 TAT-CT-ACTTAGTGGAGAA-GGG--AAGACATCTATATCGTATTACTGTATGTGGTA---TTTTGCAAGTAATGAAGCATTTTAACTGGCTCCAGCATAGCCCTTTCCACAT-TACAGTTCCAGTCG-TCCATGAGGGCTtgtg-gtc--agtt--caaaaggcactggaca-ctgaatcaggagatctgtattcTGGAGCAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 79332 188 + 100774 TAT-CT-ACTTAGTGGAGAA-GGG--AAGACATCTATATCGTATTACTGTATGTGGTA---TTTTGCAAGTAATGAAGCATTTTAACTGGCTCCAGCATAGCCCTTTCCACAT-TACAGTTCCAGTCA-TCCATGAGGGCTtgtg-gtc--agtt--caaaaggcactggaca-ctgaatcaggagatctgtattcTGGAGCAG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1417454 190 + 91010382 TATGCT-ACTTAGTGGAGAAGGGG--AAGACATCTATATCGTATTACTGTATGTGGTA---TTTTGCAAATAATGAAGCATTTTAACTGGCTCCATCATAGCCCTTTCCACAT-TACAGTTCCAGTCG-TCCATGAGAGCTtgcg-gtc--agtc--caaaaggcactggaca-ctgaatcaggagatctgtattcTGGAGCAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 899729 189 - 930449 TAT-CT-ACTTAGTGGAGAAGGGG--AAGACATCTATATCGTATTACTGTATGTGGTA---TTTTGCAAATAATGAAGCATTTTGACTGGCTCCAGCATAGCCCTTTCCACAT-TACAGTTCCAGTCG-TCTATGAGGGCTtgtg-gtc--agtt--caaaaggcactggaca-ctgaatcaggagatctgtattcTGGAGCAG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818070 190 - 1687011 TATGCT-ACTTAGTGGAGAAGGGG--AAGACATCTACATTGTATTACTGTATGTGGTA---TTTTGCAAATAATGAAGCATTTTAACTGGCTCCATCATAGCCCTTTCCACAT-TACATTTCCAGTCG-TCCATGAGGGCCTGCG-GTC--AGTT--CAAAAGGCACTGGACA-CTGAATCAGGAGATCCGTATTCTGGAGCAG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204171342 188 + 204313951 TATGCT-ACTTAGTAGAGAGTGGG-AAAGACAACTACATTGTATTACTGTATGTGGTA---TTCTGCAAATAATGAAGCATTTTAACTGGCTCCATCACAGCCCTTTCCACAT-TACAGTTCCGATTG-TCCACGAGGGTTTGCG-GTC--AGTT--CAAGAGGCAATGGA---CTGCATCA-GAGATCTGTATTCTGGAAGAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16313171 189 + 16417988 TATGCT-ACTTCGTACAGAATGGG-AAAGACATCTACATTATATTACTGTATGTGGTA---T--TGCAAATAATGAAGCATTTTAACTGGCTCCATCATAGCCCTTTCCACAT-GACAGTTCCAATCG-TCCATGAGGGTTTGCG-GTC--AGTT--CAAAAGGCACTGGACG-CTGTATCAGGGGATCTGTATTCTGGAAGAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 101003 189 - 306014 TATGCT-ACTTCATAGAGAATGGG-AAAGACATCTGCATTGTATTACTGTATGTGGTA---T--TGCAAATAATGAAGCATTTTAACTGGCTGCATCATAGCCCTTTCCACAT-TACAGTTCCAATCG-TCCACGAGGGTTTGCG-GTC--AGTT--CAAAAGGCACTGGATC-CTGTATCAGGGGATCTGTATTCTGGAAGAG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 143824 191 - 211231 TATGCT-ACTCAGTAGAGAATGGG-AAAGGCATCTAGACTGTATTACTGTACGTGGCA---TTCTGCAAACAATGAAGCATTTTAACTGGCTCCATCATAGCCCTTTCCACAT-TACAGTTCCGATCG-TCCACGAGGGTTTGCG-GTC--GGTT--CAAAAGGCACGGGACA-CTGTATCAGGAGATCTGTATTCTGGAAGAG i aotNan1.NW_018494784v1 I 219 C 0 s otoGar3.GL873745 2132597 171 - 2165740 TATGCT-ACTTAGTGGAAAGTGGG-GAAGACATAGATATTGTTTTACTATATGTGGCA--GTTTTGCAAATAAAG------------------CTTCACTGCCCTTTTCTCAC-TGGAGCTCCAAACA-TGTTTGAAGCCTTGTG-GGC--AGTG--AAAAAGGCAGTGAACA-GTTTATTA---GATTGACATTCTAGAATAA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74345196 178 + 120421639 TCTGTTAACTCAGTAAAGAATGGC-AAAGAAATCCATAT------------TGCTGTG---TTTTCTAAAT-ATGAAGCATTTTTACTGGCTCCATCTTAACCCTTCCCATAT-TGGCTCTCTGCATG-TCCTTCAAGACTTTTG-TTTTAAG-----AAAATGAACTAGAGA-GCATACTGGGAGACTTGTCCTCTGGAACAG i mm10.chr13 C 0 C 0 s canFam3.chr34 11958661 181 + 42124431 TATGAT-TCTTAGTGGAGAATGGG-AAAGATTTACATTTTG------CGAAAGTGGTA---GTTTGCAAACAATGAAGCACTTTTACGGGATCCAT------CCTCTTCACCC-TAGAGCACCACATGTTCTGCAAGGTTTTGTGCTTC--ATTT--AGAAAAGCACTGGACA-GTGTAGTGGGAGATCCGTTTTCTAGAAGAG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 372676 193 - 913073 TTCGCT-CCTTAGTGGAGAGTGGG-AAAGA-GTATATATTGCATAATGATATGTGGCAGAGCTTTGCAATCAAGGAAGCACTTTTACTGAATCTACCAA---CCTTTTCATACATGGAGCTCCAAACA-TCAGTTAGGTTTTGTG-GTC--CACTGGAAAAAACCAGCAGACA-GTAAAACAAGAGATTTATGTTCTAGAATAG i dasNov3.JH577625 C 0 I 7895 e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=404915.000000 s hg38.chr3_KI270934v1_alt 131723 63 + 163458 ------------TAAAGGC-TGAC-A----GC------CCAGAGGGAAGA--GGT-GTCATCCCTTCATC--ACACAGGA---GGATGTCGGATG------------------------------------------------------- s panTro5.chr3 2596869 63 - 202621043 ------------TAAAGGC-TGAC-A----GC------CCAGAGGGAAGA--GGT-GTCATCCCTTCATC--ACACAGGA---GGATGTCGGATG------------------------------------------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 184467 63 - 190779 ------------TAAAGGC-TGAC-A----GC------CCAGAGGGAAGA--CGT-GTCATCCCTTCATC--ACACAGGA---GGATGTCGGATG------------------------------------------------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 24650 64 + 880730 ------------TAAAGGCTTGAC-A----GC------CCAGAGGGAAGA--GGT-GTCATCCCTTCATC--ACACAGGA---GGATGCTGGATG------------------------------------------------------- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855419 63 - 180051392 ------------TAAAAGC-TGAC-A----GC------CCAGAGGGAGGA--GGT-GTCATTCCTTCATC--ACACAGGA---GGATGCTGGATG------------------------------------------------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1324483 63 + 181584905 ------------TAAAAGC-TGAC-A----GC------CCAGAGGGAGGA--GGT-GTCATTCCTTCATC--ACACAGGA---GGATGCTGGATG------------------------------------------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 79520 63 + 100774 ------------TAAAAGC-TGAC-A----GC------CCAGAGGGAGGA--GGT-GTCATTCCTTCATC--ACACAGGA---GGATGCTGGATG------------------------------------------------------- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1417644 63 + 91010382 ------------TAAAAGC-TGAC-A----GC------CCAGAGGGACGA--GGT-GTCATCCCTTCATC--ACACAGGA---GGATGTTGGATG------------------------------------------------------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 899918 63 - 930449 ------------TAAAAGC-TGAC-A----GC------CCAGAGGGAGGA--GGT-GTCATCCCTTCATC--ACACAGGA---GGATGGTGGATG------------------------------------------------------- i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818260 62 - 1687011 ------------TAAAAGC-TGAC-A----G-------CCAGAGGGACGA--GGT-GTCATCCCTTCACC--ACACAGGA---GGATGTTGGGTG------------------------------------------------------- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204171530 65 + 204313951 ------------TAAAAGC-TGAT-G----GC------CTAGAAAGATGA--GGT-GTCATCCCTTCATCATACACAGGA---GGATGTCAGATG------------------------------------------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16313360 64 + 16417988 ------------TAAAAGC-TGAT-A----GC------CCAGAGGGATGA--GGT-GTCAT-CCTTCATCACACACAGGA---GGATGTCAGACG------------------------------------------------------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 101192 65 - 306014 ------------TAAAAGC-TGAC-A----GC------CCAGAGGGGCGA--GGT-GTCATCCCTTCGTCACACACAGGA---GGATGTCAGACA------------------------------------------------------- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 144015 65 - 211231 ------------TAAAAGC-TGAT-A----GC------CCAGAGGGACGA--GGT-GTCATCCCTTCATCACACACAGGA---GGATGTCAGACG------------------------------------------------------- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2132768 65 - 2165740 ------------TAAAAAC-CGTCAA----GT------TCAGAGAGATGAATGGT-GTAA-CCCTTTATCGTGCACAGAA---GGATTTCAGT--------------------------------------------------------- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74345374 85 + 120421639 GCTACTCCTTATTGAAACA-AGGT-A----ACCCTTAACCTTAGGGATGA--AATCATAATGCCTTTAGC--ATATATAACCGAGACTTTAGCCA------------------------------------------------------- i mm10.chr13 C 0 C 0 s canFam3.chr34 11958842 128 + 42124431 GCTC--------TATTGCT-TGTT-GTGACGC------CTAGGCACCAGT--GGG-ATCATCCCTCCACTCTTAATGTGA---GGACTCCAGGCCCAGAGGTGATCACAGACCTGCTTTACCACTCTCCACATCTGTTCTGGGCTTTAGG i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 372869 7895 - 913073 I e cerAty1.NW_012004452v1 37437 2327 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=522496.000000 s hg38.chr3_KI270934v1_alt 131786 57 + 163458 CACACTCT-----------------------CCC-CTGCCTGGT-----------------------------------TGATGCTGGCTTTTTCCTGGCCAACGTCTACAACTTG s panTro5.chr3 2596932 57 - 202621043 CACACTCT-----------------------CCC-CTGCCTGGT-----------------------------------TGCTGCTGGCTTTTTCCTGGCCAACGTCTACAACTTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 184530 57 - 190779 CACACTCT-----------------------CCC-CTGCCTGGT-----------------------------------TGCTGCTGGCTTTTTCCTGGCCAACGTCTACAACTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 24714 56 + 880730 CACACTCT-----------------------CCC-CTGCCTGGC-----------------------------------TGCTGCTGGC-TTTTCCTGGCCAACGTCTACAACTTG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855482 57 - 180051392 CACACTCT-----------------------CCC-CTGCCTGGC-----------------------------------TGCTCCTGGCTTTTTCCTGGCCAATGTCTACAATTTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1324546 57 + 181584905 CACACTCT-----------------------CCC-CTGCCTGGC-----------------------------------TGCTCCTGGCTTTTTCCTGGCCAATGTCTACAATTTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 79583 57 + 100774 CACACTCT-----------------------CCC-CTGCCTGGC-----------------------------------TGCTCCTGGCTTTTTCCTGGTCAACGTCTACAATTTG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 39764 57 - 218577 CACACTCT-----------------------CCC-CTGCCTGGC-----------------------------------TGCTCCTGGCTTTTTCCTGGCCAATGTCTACAACTTG i cerAty1.NW_012004452v1 I 2327 C 0 s chlSab2.chr4 1417707 57 + 91010382 CACACTCT-----------------------CCC-CTGCCTGGC-----------------------------------TGCTCCTGGCTTTTTCCTGGCCAATGTCTACAATTTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 899981 57 - 930449 CACACTCT-----------------------CCC-CTGCCTGGC-----------------------------------TGCTCCTGGCTTTTTCCTGGTCAACGTCTACAACTTG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818322 57 - 1687011 CACACGCT-----------------------CCC-CTGCCTGGC-----------------------------------TGCTCCTGGCTTTTTCCTGGCCAACGTCTATAATTTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204171595 58 + 204313951 CACACTCT-----------------------CCCCCTGCCTGGC-----------------------------------CGCTCCTGGCTTTTTCCTGGCCAACGTCTACAACTTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16313424 58 + 16417988 CACACTCT-----------------------CCCACTGCCTGGC-----------------------------------TGCTCCTGGCTTTTTCCTGGCCAGCGTCTACAACTTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 101257 58 - 306014 CACACTCT-----------------------CCCGCTGCCTGGC-----------------------------------TGCTCCTGGCTTTTTCCTGGCCAGTGTCTACAACTTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 144080 58 - 211231 CACACTCT-----------------------CCCCCTGCCTGGC-----------------------------------TGCTCCTGGCTTTTTCCTGGCCAACGTCTACAACTTG i aotNan1.NW_018494784v1 C 0 I 448 s otoGar3.GL873745 2132833 69 - 2165740 CACACTCTTCTGGTCATGCCCAGAGATGCTCCCT-CTGCCTGAC-----------------------------------TGCCCCTGGCT-----------GACCTCTACGACTCA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74345459 28 + 120421639 CACACCCT-----------------------CTC-ATGGAT-------------------------------------------CAGGCCTGTTC--------------------- i mm10.chr13 C 0 C 0 s canFam3.chr34 11958970 91 + 42124431 CACATCCT-----------------------CTC-TTGTCTGTCATACTCCACGGtgctgttccctctgtctggacacttgcctctggcctttccctggctaacttctacaactc- i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 372869 7895 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=245758.000000 s hg38.chr3_KI270934v1_alt 131843 45 + 163458 --ACATATCTCACTGCTTAAATTTTCCATCTTAGAAACCTTTACTCA s panTro5.chr3 2596989 45 - 202621043 --ACATATCTCGCTGCTTAAATTTTCCATCTTAGAAAGCTTTACTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 184587 45 - 190779 --ACATATCTCGCTGCTTAAATTTTCCATCTTAGAAAGCTTTACTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 24770 45 + 880730 --ACAGATCTCGCTGCTTAAATTTTCCATCTTAGCAACCTTTATTCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855539 39 - 180051392 --ACACATCTTGCTGCCTAAATTTTCCATCTTAGAAACCAC------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1324603 36 + 181584905 --ACACATCTTGCTGCCTAAATTTTCCATCTTAGAAAC--------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 79640 45 + 100774 --ACACATCTTGCTGCCTAAATTTTCCGTCTTAGAAACCTTTACCCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 39821 45 - 218577 --ACACATCTTGCTGCCTAAATTTTCCATCTTAGAAACCTTTACCCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1417764 36 + 91010382 --ACACATCTTGCTGCCTAAATTTTCCATCTTAGAAAC--------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 900038 45 - 930449 --ACACATCTTGCTGCCTAAATTTTCCATCTTAGAAACCTTTACCCA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818379 45 - 1687011 --ACACATCTTGCTGCCTAAATTTTCCATCTTAGAAAACTTTACCCA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204171653 43 + 204313951 --CCACATGTTAT--CTTAAATATTCCATCTTAGAAAACTTTACCCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16313482 41 + 16417988 --CCAC--GTTAT--CTTAAATATTCCATCTTAGAAAACTTTACCCA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 101315 43 - 306014 --CCACATGTTAT--CTTAAATATTCCATCTTAGAAAACTTTACCCA i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2132902 43 - 2165740 --TTAAATCTTG--GCTTAAATGTCCCATCTTAGAAACATTTATCCA i otoGar3.GL873745 C 0 I 612 s mm10.chr13 74345487 29 + 120421639 -------------TCCCTGACTGGTTACCCTTAG----CCTTCCTC- i mm10.chr13 C 0 C 0 s canFam3.chr34 11959061 45 + 42124431 tcccaaggtttg--gcttaaatgtcCCACTCTATAAACACTTATTCA i canFam3.chr34 C 0 C 0 e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 372869 7895 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=98118.000000 s hg38.chr3_KI270934v1_alt 131888 15 + 163458 AG-AAAACTGGTTTTA s panTro5.chr3 2597034 15 - 202621043 AG-AAAACTGGTTTTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 184632 15 - 190779 AG-AAAACTGGTTTTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 24815 16 + 880730 AGAAAAACTGGTTTTA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855578 9 - 180051392 -------CTGGTTTTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1324639 9 + 181584905 -------CTGGTTTTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 79685 15 + 100774 AG-AAAACTGGTTTTA i macNem1.NW_012013899v1 C 0 I 313 s cerAty1.NW_012004452v1 39866 15 - 218577 AG-AAAACTGGTTTTA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1417800 9 + 91010382 -------CTGGTTTTA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 900083 15 - 930449 AG-AAAACTGGTTTTA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818424 15 - 1687011 AG-AAAACTGGTTTTA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204171696 15 + 204313951 AG-AAAAGTGCTTTTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16313523 15 + 16417988 AG-AAAAGTGCTTTTA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 101358 15 - 306014 AG-AAAAGTGCTTTTA i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2133557 15 - 2165740 AG-AAAACTGCTTTTA i otoGar3.GL873745 I 612 C 0 s mm10.chr13 74345516 15 + 120421639 AG-GAAACTTCTCTAA i mm10.chr13 C 0 I 6 s canFam3.chr34 11959106 15 + 42124431 AG-AAAACTAGTATTA i canFam3.chr34 C 0 C 0 e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 372869 7895 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=25056.000000 s hg38.chr3_KI270934v1_alt 131903 3 + 163458 GTG s panTro5.chr3 2597049 3 - 202621043 GTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 184647 3 - 190779 GTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 24831 3 + 880730 GTG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855587 3 - 180051392 GCG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1324648 3 + 181584905 GCG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 80013 3 + 100774 GTG i macNem1.NW_012013899v1 I 313 C 0 s cerAty1.NW_012004452v1 39881 3 - 218577 GTG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1417809 3 + 91010382 GTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 900098 3 - 930449 GTG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818439 3 - 1687011 GTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204171711 3 + 204313951 GTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16313538 3 + 16417988 GTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 101373 3 - 306014 GCG i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2133572 1 - 2165740 --G i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74345537 3 + 120421639 ATA i mm10.chr13 I 6 C 0 s canFam3.chr34 11959121 3 + 42124431 ATG i canFam3.chr34 C 0 I 17 e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 372869 7895 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=131776.000000 s hg38.chr3_KI270934v1_alt 131906 27 + 163458 TTTAGTTTTTAGTGGCTCTGTGTGAG--A s panTro5.chr3 2597052 27 - 202621043 TTTAGTTTTTAGTGGCTCTGTGTGAG--A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 184650 27 - 190779 TTTAGTTTTTAGTGGCTCTGCGTGAG--A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 24834 26 + 880730 TTTAG-TTTTAGTGGCTCTGTGTGAG--A i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855590 26 - 180051392 TTTAGTTTTTAGTGGCTGTGTGTGAG--- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1324651 26 + 181584905 TTTAGTTTTTAGCGGCTGTGTGTGAG--- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 80016 26 + 100774 TTTAGTTTTTAGCGGCTGTGTGTGAG--- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 39884 26 - 218577 TTTAGTTTTTAGTGGCTGTGTGTGAG--- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1417812 28 + 91010382 TTTAGTTTTTAGCGGCTGTGTGTGAGAG- i chlSab2.chr4 C 0 I 56 s manLeu1.NW_012107609v1 900101 28 - 930449 TTTAGTTTTTAGCGGCTGTGTGTGTGAG- i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818442 24 - 1687011 TTTAGTTTTTGGCGGCTGTGAGAG----- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204171714 26 + 204313951 TTTAGTTTTCAGTGGCTCAGTGTGAG--- i calJac3.chr2 C 0 I 2 s saiBol1.JH378155 16313541 25 + 16417988 -TTAGTTTTtagtggctcagtgtgag--- i saiBol1.JH378155 C 0 I 2 s cebCap1.NW_016108150v1 101376 26 - 306014 TTTAGTTTTTAGTGGCTCAGTGTGAG--- i cebCap1.NW_016108150v1 C 0 I 2 s otoGar3.GL873745 2133573 22 - 2165740 TGAAATCTT----GGCCCAGTGTCAG--- i otoGar3.GL873745 C 0 I 2 s mm10.chr13 74345540 24 + 120421639 TCCAAGGTTAACCTGGTGTCAGTG----- i mm10.chr13 C 0 C 0 e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 372869 7895 - 913073 I e canFam3.chr34 11959124 17 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1000.000000 s hg38.chr3_KI270934v1_alt 131933 1 + 163458 G s panTro5.chr3 2597079 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 184677 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 24860 1 + 880730 G i gorGor5.CYUI01015759v1 C 0 C 0 s canFam3.chr34 11959141 1 + 42124431 G i canFam3.chr34 I 17 C 0 e mm10.chr13 74345564 0 + 120421639 C e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 372869 7895 - 913073 I e macNem1.NW_012013899v1 80042 0 + 100774 C e saiBol1.JH378155 16313566 2 + 16417988 I e calJac3.chr2 204171740 2 + 204313951 I e cebCap1.NW_016108150v1 101402 2 - 306014 I e otoGar3.GL873745 2133595 2 - 2165740 I e colAng1.NW_012116910v1 818466 0 - 1687011 C e manLeu1.NW_012107609v1 900129 0 - 930449 C e chlSab2.chr4 1417840 56 + 91010382 I e cerAty1.NW_012004452v1 39910 0 - 218577 C e macFas5.chr6 1324677 0 + 181584905 C e rheMac8.chr6 179855616 0 - 180051392 C e nomLeu3.chr11 2900956 4012 - 123690457 I a score=819191.000000 s hg38.chr3_KI270934v1_alt 131934 110 + 163458 AGGTCACACTGT-CCCATATGCTAAGGTTGGCCAGCCATTTAGGGGATACGT-TTTCCATTCTGCTGGCGGCATTTTAGAAGACC-------ACTG--------AA---TAGTCTCAGAAATATCATCAA s panTro5.chr3 2597080 110 - 202621043 AGGTGACACTGT-CCCATATGCTAAGGTTGGCCAGCCATTCAGGGGATGCGT-TTTCCATTCTGCTGGCGGCATTTTAGAAGACC-------ACTG--------AA---TAGTCTCAGAAATATCATAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 184678 110 - 190779 AGGTGACACTGT-CCCATATGCTAAGGTTGGCCAGCCATTCAGGGGATGCGT-TTTCCATTCTGCTGGCGGCATTTTAGAAGACC-------ACTG--------AA---TAGTCTCAGAAATATCATAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 24861 111 + 880730 AGGTCACACTGTCCCCATATGCTAAGGTTGGCCAGCCATTTAGGGGATATGT-TTTCCATTCTGCTGGCGGCATTTTAGAAGACC-------ACTG--------AA---TAGTCTCAGAAATATCATAAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855616 109 - 180051392 AGGTGACACTGT--CCATATGCTAAGGTTGGCCAGTCATTTAGAGGATACAT-TTTCCATTCTGCTAGCTGCATTTTAGAAGACC-------ACTG--------AA---TAGTCTCAGAAATATCATAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1324677 109 + 181584905 AGGTGACACTGT--CCATATGCTAAGGTTGGCCAGTCATTTAGAGGATACAT-TTTCCATTCTGCTAGCTGCATTTTAGAAGACC-------ACTG--------AA---TAGTCTCAGAAATATCATAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 80042 109 + 100774 AGGTGACACTGT--CCATACGCTAAGGTTGGCCAGTCATTTAGAGGATACAT-TTTCCATTCTGCTAGCTGCATTTTAGAAGACC-------ACTG--------AA---TAGTCTCAGAAATATCATAAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 39910 109 - 218577 AGGTGACACTGT--CCATATGCTAAGGTTGGCCAGTCATTTAGAGGATACAT-TTTCCATTCTGCTAGCTGCATTTTAGAAGACC-------ACTG--------AA---TAGTCTCAGAAATATCATAAA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012107609v1 900129 109 - 930449 AGGTGACACTGT--CCATACGCTAAGGTTGGCCAGTCATTTAGAGGACAGAT-TTTCCATTCTGCTGGGTGCATTTTAGAAGACC-------ACTG--------AA---TAGTCTCAGAAATATCATAAA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818466 109 - 1687011 AGGTGACAGTGT--CCATATGCTAAGGTTGGCCAGTCATTTAGAGGATATAT-TTTCCATTCTGCTGGGTGCATTTTAGAAGACC-------ACTG--------AA---TAGTCTCAGAAATATCATAAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204171742 109 + 204313951 AGGTGACATTCT--CCATGTGCTAAGGTTGGCCAGCCATTTAGGGGATGTGT-TTTCCATTCTGCTGGCTGCATTTTAGAAGACC-------ACTG--------AA---TAGTCTCAGAAATATCATAAA i calJac3.chr2 I 2 C 0 s saiBol1.JH378155 16313568 109 + 16417988 aggtgacattct--ccatgtgctaaggctggtcagccatttaggggatgtgt-tttctattctgctggctgcattttagaagacc-------actg--------aA---TAGTCTCAGAAATATCATAAA i saiBol1.JH378155 I 2 C 0 s cebCap1.NW_016108150v1 101404 109 - 306014 AGGTGACATTCT--CCATGTGTTAAGGCTGGCCAGCCATTTAGGGGATGTGT-TTTCTATTCTGCTGGCTGAATTTTAGAAGACC-------ACTG--------AA---TAGTCTCAGAAATATCATAAA i cebCap1.NW_016108150v1 I 2 C 0 s otoGar3.GL873745 2133597 109 - 2165740 AAGAGACATTTT--CCACATGCTAAGAT--------CGTTCAGGGGGTATGT-TTTCTATCCTGCTGACTGTATTTTATAAGATC-------ACTGATAATGTAAG---AAGTTCCTGAAATATCATAAA i otoGar3.GL873745 I 2 C 0 s mm10.chr13 74345564 110 + 120421639 ----AAATCAGT--CCA-GTG-TGAATCCAGTCAGCCATTAAGAGAATACAT-TTTTCGTTTTACTTACTCTACTTAAAAAGACCAAAATATAATG--------AA---GAGACTTGGACATATCCCCCC i mm10.chr13 C 0 C 0 s canFam3.chr34 11959142 104 + 42124431 AGGCCACATTCT--TCATATGTGAA------CCA---ACTTATGAGGCATGTCTTTCCATTCTGCTGACTGCATTTTAGAGAACG-------GATA--------AAATGAAATCTTAGTAATCTCACAAA i canFam3.chr34 C 0 C 0 e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 372869 7895 - 913073 I e chlSab2.chr4 1417840 56 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=26194.000000 s hg38.chr3_KI270934v1_alt 132044 3 + 163458 GAA s panTro5.chr3 2597190 3 - 202621043 GAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 184788 3 - 190779 GAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 24972 3 + 880730 GAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855725 3 - 180051392 GAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1324786 3 + 181584905 GAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 80151 3 + 100774 GAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 40019 3 - 218577 GAA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012107609v1 900238 3 - 930449 GAA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818575 3 - 1687011 GAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204171851 3 + 204313951 GAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16313677 3 + 16417988 GAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 101513 3 - 306014 GAA i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2133706 3 - 2165740 GGA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11959246 3 + 42124431 GAA i canFam3.chr34 C 0 I 332 e mm10.chr13 74345674 0 + 120421639 C e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 372869 7895 - 913073 I e chlSab2.chr4 1417840 56 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=125664.000000 s hg38.chr3_KI270934v1_alt 132047 20 + 163458 TAGTTTTAGGggct-gggcgt s panTro5.chr3 2597193 20 - 202621043 TAGTTTTAGGggct-gggcgc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 184791 20 - 190779 TAGTTTTAGGggct-gggcgc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 24975 21 + 880730 TAGTTTTAGGGGCTGgggcgc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855728 20 - 180051392 TAGTTTTAGGggct-gggcac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1324789 20 + 181584905 TAGTTTTAGGggct-gggcac i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 80154 20 + 100774 TAGTTTTAGGggct-gggcac i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 40022 20 - 218577 TAGTATTAGGggct-gggcgc i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012107609v1 900241 20 - 930449 TAGTTTTAGGggct-gggcgc i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818578 20 - 1687011 TAGTTTTAGGggct-gggcgt i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204171854 20 + 204313951 TAGTTTTAGGggct-gggcac i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16313680 20 + 16417988 TAGTTTTAGGggct-gggtgc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 101516 20 - 306014 TAGTTTTAGGggct-gggtgc i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2133709 20 - 2165740 CAATTAAGAAAATA-ATACAT i otoGar3.GL873745 C 0 I 281 e mm10.chr13 74345674 0 + 120421639 C e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 372869 7895 - 913073 I e canFam3.chr34 11959249 332 + 42124431 I e chlSab2.chr4 1417840 56 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=367306.000000 s hg38.chr3_KI270934v1_alt 132067 65 + 163458 ggtgg-ctcatgcc-tgt-aatcccagca-ttttgggaggccaag-gtgggcagatcacctgaa-gtcagg s panTro5.chr3 2597213 63 - 202621043 ggtgg-ctcatgcc-tgt-aatcccagca-ttttgggaggcc-ag-gt-ggcagatcacctgaa-gtcagg i panTro5.chr3 C 0 I 1461 s panPan2.chrUn_NW_014024201v1 184811 65 - 190779 ggtgg-ctcatgcc-tgt-aatcccagca-ttttgggaggccaag-gtgggcagatcacctgaa-gtcagg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 24996 67 + 880730 ggtggcctcacgcc-tgt-catcccagcatttttgggaggccaag-gtgggcagatcacctgaa-gtcagg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855748 65 - 180051392 ggtgg-ctcctgcc-tgt-aatcccagca-ttttgggaggccaag-gtgggtggaacacttgaa-gtcagg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1324809 65 + 181584905 ggtgg-ctcctgcc-tgt-aatcccagca-ttttgggaggccaag-gtgggtggaacacttgaa-gtcagg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 80174 65 + 100774 ggtgg-ctcctgcc-tgt-aatcccagca-ttttgggaggccaag-gtgggtggaacacttgaa-gtcagg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 40042 69 - 218577 agtgg-ctcatgccttgtaaatcccagca-ttttgggaggccaagagtgggtggatcagctgaaggtcagg i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012107609v1 900261 65 - 930449 aatgg-ctcatgcc-tgt-aatcccagca-ttttgggaggccaag-gtgggtggatcacctgaa-gtcagg i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818598 65 - 1687011 ggtgg-ctcctgcc-tgt-aatcccagca-ttttgggaggccagg-gtgggtggatcacctgaa-gtcagg i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204171874 65 + 204313951 agtgg-cttatgcc-tgt-aatcccagca-ctttgggaagctgag-gtgggcagattacctgag-gtcagg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16313700 65 + 16417988 agtga-ctcatgcc-tgt-aatcccagca-ctttgggaagctgag-gtgggcagattaccagag-gtcagg i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 101536 65 - 306014 cgtgg-cttatgcc-tgt-aatcccagca-ctttgggaagctgag-gtgggcagattaccagag-gtcagg i cebCap1.NW_016108150v1 C 0 C 0 e mm10.chr13 74345674 0 + 120421639 C e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 372869 7895 - 913073 I e canFam3.chr34 11959249 332 + 42124431 I e otoGar3.GL873745 2133729 281 - 2165740 I e chlSab2.chr4 1417840 56 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=458831.000000 s hg38.chr3_KI270934v1_alt 132132 85 + 163458 agttcgagaccagtctggccaacatggcaaaaccccctctctact--------aaaaattagctggtcgtggtggcgggcacctgtaatccca s panPan2.chrUn_NW_014024201v1 184876 85 - 190779 agttcgagaccagtctggccaacatggcaaaaccccctctctact--------aaaaattagctgggcgtggtggcgggcacctgtaatccca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 25063 85 + 880730 agttcgagaccagtctggccaacatggcaaaaccccctctctact--------aaaaattagctgggcgtggtggcgggcacctgtaatccca i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855813 85 - 180051392 agttcaagaccagtctggccaacatggcgaaaccctgtctctact--------aaaaattagccgggcatggtggtgggcacctgtaatccca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1324874 85 + 181584905 agttcaagaccagtctggccaacatggcgaaaccctgtctctact--------aaaaattagccgggcatggtggtgggcacctgtaatccca i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 80239 85 + 100774 agttcaagaccagtctggccaacatggcgaaaccctgtctctact--------aaaaattagccgggcatggtggtgggcacctgtaatccca i macNem1.NW_012013899v1 C 0 M 855 s cerAty1.NW_012004452v1 40111 85 - 218577 agttcaagaccagtctggccaacatggcggaaccccatctgtact--------aaaaattagccaggcatggtggtgggcacctgtaatccca i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012107609v1 900326 85 - 930449 agttcaagaccagtctggccaacatggcgaaaccccatctgtact--------aaaaattagccgggcatggtggcaggcacctgtaatccca i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818663 85 - 1687011 agttcaagcccagtctggccaacatggcgaaaccccatctgtact--------aaaaattagccgggcatggtggcaggcagctgtaatccca i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204171939 93 + 204313951 agttcgagaccagtctggccaacacggcaaaaccccatctctactaaacacacaaaaattagccaggcgtggtggcgggcacctgtaatccca i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16313765 93 + 16417988 agttcaagaccagtctggccaacgtggcaaaaccccatctctactaaaaacacaaaaattagctaagtgtggtggcaggcacctgtaatccca i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 101601 93 - 306014 agttcaagaccagtctggccaacatggcaaaaccccatctctactaaacacacaaaaattagctaagcgtggtggcaggcacctgtaatccca i cebCap1.NW_016108150v1 C 0 C 0 e mm10.chr13 74345674 0 + 120421639 C e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 372869 7895 - 913073 I e canFam3.chr34 11959249 332 + 42124431 I e otoGar3.GL873745 2133729 281 - 2165740 I e chlSab2.chr4 1417840 56 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=433181.000000 s hg38.chr3_KI270934v1_alt 132217 115 + 163458 gctacttgggaagctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagccgagactgtgccactgtactccggcctgggcgacagagcgagacaatgtctcc s panPan2.chrUn_NW_014024201v1 184961 115 - 190779 gctacttgggaagctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagccgagactgtgccactgtactccggcctgggcgacagagcgagacaatgtctcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 25148 115 + 880730 gctacttgggaagctgaggcacgagaatcgcttgaacccaggagggagaggttccagtgagccgagactgtgccactgtactccggcctgggcgacagagcgagacaatgtctcc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179855898 115 - 180051392 gctacttgggaggctgaggcaggagaatcgcttgaacacaggaggcagaggttgcagtgagcctagactctgccactgtactccagcctgggcaacagagcgagacaaagtctcc i rheMac8.chr6 C 0 I 19 s macFas5.chr6 1324959 115 + 181584905 gctacttgggaggctgaggcaggagaatcgcttgaacacaggaggcagaggttgcagtgagcctagactctgccactgcactccagcctgggcaacagagcgagacaatgtctcc i macFas5.chr6 C 0 I 20 s cerAty1.NW_012004452v1 40196 113 - 218577 -gtacttgggaggctgaggcagg-gaatcgctggaagccaggaggcagaggttgcagagagcctagactctgccactgcactccagcctgggcaacagagcgagacaacgtctcc i cerAty1.NW_012004452v1 C 0 I 10 s manLeu1.NW_012107609v1 900411 115 - 930449 gctacttgggaggctgaggcaggagaatcgcttgaacccagcaggcagaggttgcagtgagcctagactctgccactgcactccagcctgggcaacagagcgagacaacgtctcc i manLeu1.NW_012107609v1 C 0 I 13 s colAng1.NW_012116910v1 818748 115 - 1687011 gctacttgggagggtgaggcaggagaattacttgaacccaggaggcagaggttgcagtgagcctagactctgccactgcactccagtctgggcgacagagcgagacaatgtctcc i colAng1.NW_012116910v1 C 0 I 3 s calJac3.chr2 204172032 102 + 204313951 gctacttggaaggctgaggcaggagaatggcttgaacccgggaggcagtggctacag-------------cgtcactgcactccagcctgggcaatggagcgagactctatctca i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16313858 101 + 16417988 gctactagggaggctgaggcaagagaatggcttgaa-ccgggaggcagaagctacag-------------tgtcactgcactccagcctggatgatggagcgagacttggtctca i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 101694 102 - 306014 gctacttgggaggctgaggcaggagaatagcttgaacccgggaggcagaagctacgg-------------tgtcactgcactccagcctgggagatggagcgacacttggtctca i cebCap1.NW_016108150v1 C 0 C 0 e mm10.chr13 74345674 0 + 120421639 C e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 372869 7895 - 913073 I e macNem1.NW_012013899v1 80324 855 + 100774 M e canFam3.chr34 11959249 332 + 42124431 I e otoGar3.GL873745 2133729 281 - 2165740 I e chlSab2.chr4 1417840 56 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=35282.000000 s hg38.chr3_KI270934v1_alt 132332 19 + 163458 aaaaaaac-aaaagaaaaaa s panPan2.chrUn_NW_014024201v1 185076 17 - 190779 -aaaaaac-aaaag-aaaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 25263 16 + 880730 -aaaaaac-aaaag--aaaa i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856032 17 - 180051392 aagaaaag-aaaag--aaaa i rheMac8.chr6 I 19 C 0 s macFas5.chr6 1325094 18 + 181584905 gagaaaagaaaaaa--aaaa i macFas5.chr6 I 20 C 0 s cerAty1.NW_012004452v1 40319 17 - 218577 gagaaaag-gaaaa--aaaa i cerAty1.NW_012004452v1 I 10 C 0 s chlSab2.chr4 1417896 17 + 91010382 aaaaaaaa-gaaaa--gaaa i chlSab2.chr4 I 56 C 0 s manLeu1.NW_012107609v1 900539 17 - 930449 gagaaaag-gaaaa--aaaA i manLeu1.NW_012107609v1 I 13 C 0 s colAng1.NW_012116910v1 818866 17 - 1687011 aaaaaaag-aaaag--aaaa i colAng1.NW_012116910v1 I 3 C 0 s calJac3.chr2 204172134 11 + 204313951 -----aaa-aaaaa--aaa- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16313959 12 + 16417988 -----aaa-aaaaa--aaaa i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 101796 11 - 306014 -----aaa-aaaaa--aaa- i cebCap1.NW_016108150v1 C 0 C 0 e mm10.chr13 74345674 0 + 120421639 C e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 372869 7895 - 913073 I e macNem1.NW_012013899v1 80324 855 + 100774 M e canFam3.chr34 11959249 332 + 42124431 I e otoGar3.GL873745 2133729 281 - 2165740 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=290761.000000 s hg38.chr3_KI270934v1_alt 132351 50 + 163458 aaaaGCTTTAGGAAAT--TATG-CACTCAGCAATCAGAAGAGGGGATGTGAGG s panPan2.chrUn_NW_014024201v1 185093 50 - 190779 aaaaGCTTTAGGAAAT--TATG-CGCTCAGCAATCAGAAGAGGGGATGTGAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 25279 51 + 880730 aaaaGCTTTAGGAAAT--TATGCCACTCAGCAATCAGAAGAGGGGATGTGAGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856049 50 - 180051392 aaaagCTTTAGGAAAT--AATA-CACTCAGCAATCAGAAGAGGGGATGTGAGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1325112 50 + 181584905 AAAAGCTTTAGGAAAT--AATA-CACTCAGCAATCAGAAGAGGGGATGTGAGG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 40336 50 - 218577 aaAAGCTTTAGGAAAT--AATA-CACTCAGCAATCAGAAGAGGGGATGTGAGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1417913 51 + 91010382 aaaaGCTTTAGGAAAT-AAATA-CACTCAGCAATCAGAAGAGGGGATGTGAGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 900556 50 - 930449 AAAAGCTTTAGGAAAT--AATA-CACTCAGCAATCAGAAGAGGGGATGTGAGG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818883 51 - 1687011 aaaaGCTTTAGGAAAT-AAATA-CACTCAGCAATCAGAAGAGGGGATGTGAGA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204172145 44 + 204313951 ------TTTAGGAAAC--AATA-CACTCAACAATCAGAAGAGGGGATGTGAGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16313971 50 + 16417988 aaaaGTTTTAGGAAAT--TATA-CACTCAACGATCAGAAGAGGGGATGTGAGA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 101807 50 - 306014 aaaaGTCTTAGGAAAT--TATA-CACTCAACAATCAGAAGAGGGGATGTGAGA i cebCap1.NW_016108150v1 C 0 C 0 s mm10.chr13 74345674 52 + 120421639 AAAAGTTCTAGGTAGTCAAGTA-CACTTAGTAATCAGAAACGGGGAAGTCAGG i mm10.chr13 C 0 C 0 e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 372869 7895 - 913073 I e macNem1.NW_012013899v1 80324 855 + 100774 M e canFam3.chr34 11959249 332 + 42124431 I e otoGar3.GL873745 2133729 281 - 2165740 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=46897.000000 s hg38.chr3_KI270934v1_alt 132401 8 + 163458 GATGTCTT s panPan2.chrUn_NW_014024201v1 185143 8 - 190779 GATGTCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 25330 8 + 880730 GACGTCTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856099 8 - 180051392 GATGTCTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1325162 8 + 181584905 GATGTCTT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 40386 8 - 218577 GATGTCTT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1417964 8 + 91010382 GAGGTCTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 900606 8 - 930449 GATGTCTT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818934 8 - 1687011 GATGTCTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204172189 8 + 204313951 GATGTCTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16314021 8 + 16417988 GATGTCTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 101857 8 - 306014 GATGTCTT i cebCap1.NW_016108150v1 C 0 C 0 s mm10.chr13 74345726 8 + 120421639 AGTGATCA i mm10.chr13 C 0 C 0 s canFam3.chr34 11959581 8 + 42124431 GATAGCTC i canFam3.chr34 I 332 C 0 e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 372869 7895 - 913073 I e macNem1.NW_012013899v1 80324 855 + 100774 M e otoGar3.GL873745 2133729 281 - 2165740 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=52012.000000 s hg38.chr3_KI270934v1_alt 132409 8 + 163458 CAAGTATT s panPan2.chrUn_NW_014024201v1 185151 8 - 190779 CAAGTATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 25338 8 + 880730 CAAGTATT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856107 8 - 180051392 CGAGTATT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1325170 8 + 181584905 CAAGTATT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 40394 8 - 218577 CAAGTATT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1417972 8 + 91010382 CAAGTATT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 900614 8 - 930449 CAAGTATT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818942 8 - 1687011 CGAGTATT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204172197 8 + 204313951 CAAGTATT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16314029 8 + 16417988 CAAGTATT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 101865 8 - 306014 CAAGTATT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2134010 8 - 2165740 CAAACATT i otoGar3.GL873745 I 281 C 0 s mm10.chr13 74345734 8 + 120421639 TAAGAATT i mm10.chr13 C 0 I 2297 s canFam3.chr34 11959589 4 + 42124431 CAAT---- i canFam3.chr34 C 0 C 0 e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 372869 7895 - 913073 I e macNem1.NW_012013899v1 80324 855 + 100774 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=193135.000000 s hg38.chr3_KI270934v1_alt 132417 51 + 163458 TAGAAATA-----CTTGCAATTCACAAATTACTTA--------TTATGTGG---------GATAAAA-A-ATTAT s panPan2.chrUn_NW_014024201v1 185159 51 - 190779 TAGAAATA-----CTTGCAATTCACAAATTACTTA--------TTATGCGG---------GATAAAA-A-ATTAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 25346 51 + 880730 TAGAAATA-----CTTGCAATTCACAAATTACTTA--------TTATGTGG---------GATAAAA-A-ATTAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856115 51 - 180051392 TAGAAATA-----CTTGCAATTCAGAAATTACTTA--------TTATGTGG---------AATAAAA-A-ATTAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1325178 51 + 181584905 TAGAAATA-----TTTGCAATTCAGAAATTACTTA--------TTATGTGG---------AATAAAA-A-ATTAT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 40402 51 - 218577 TAGAAATA-----CTTGCAATTCAGAAATTACTTG--------TTATGTGG---------GATAAAA-A-ATTAT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1417980 51 + 91010382 TAGAAATA-----TTTGCAATTCAGAAATTACTTA--------TTATGTGG---------AATAAAA-A-ATTAT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 900622 51 - 930449 TAGAAATA-----CTTGCAATTCAGAAATTACTTG--------TTATGTGG---------GATAAAA-A-ATTAT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 818950 51 - 1687011 TAGAAATA-----TTTGCAATTCAGAAATTACTTA--------TTATGTGG---------AATAAAA-A-ATTAT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204172205 49 + 204313951 TAGAAATA-----CTTGCAATTCAGAAATTATTTA--------TTCTGT------------ACAAGAGA-AAAAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16314037 44 + 16417988 TAGAAATA-----CTTGCAATTCAGA----ATTTA--------TTGTGT------------ACATGA-A-AAAAT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 101873 44 - 306014 TAGAAATA-----CTTGCAATTCAGA----ATTTA--------TTCTGT------------ACAAGA-A-ATAAT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2134018 69 - 2165740 TGAGTTTT-----ATTCCAATTACAAAGTAGTTTGCTAGATTTTTAAGTAGATCTCAACTAATAAAA-GCAATTT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11959593 53 + 42124431 TACAAATAAGTTTCTTGGATTTCT--AAGTAGATC--------TTAACT-----------GACAAAA-GCAATAT i canFam3.chr34 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 372869 7895 - 913073 I e macNem1.NW_012013899v1 80324 855 + 100774 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=278607.000000 s hg38.chr3_KI270934v1_alt 132468 44 + 163458 TCTTCATTTCTCCAATTTCTAG----------TCTGTTTTTATTGACATAAGCT s panPan2.chrUn_NW_014024201v1 185210 44 - 190779 TCTTCATTTCTCCAATTTCTAG----------TCTGTTTTTATTGACATAAGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 25397 46 + 880730 TCTTCATTTCTCCAATTTCTAG--------TCTCTGTTTTTATTGACATAAGCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856166 46 - 180051392 TCTCCATTTCTCCAATTTCTAG--------TCTCTGTTTTTATTGACATAAGCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1325229 46 + 181584905 TCTCCATTTCTCCAATTTCTAG--------TCTCTGTTTTTATTGACATAAGCT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 40453 44 - 218577 TCTCCATTTCTCCAATTTCTAG----------TCTGTTTTTATTGACATAAGCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1418031 46 + 91010382 TCTCCATTTCTCCAATTTCTAG--------TCTCTGTTTTTATTGACATAAGCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 900673 44 - 930449 TCTCCATTTCTCCAATTTCTAG----------TCTGTTTTTATTGACATAAGCT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 819001 44 - 1687011 TCTCCCTTTCTCCAATTTCTAG----------TCTGTTTTCATGGACATAAGCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204172254 52 + 204313951 TCTTCATTTCTCTAATTTCTAGACT--ATTTCTTTGTTTTTATTGACATAAGCT i calJac3.chr2 C 0 I 283 s saiBol1.JH378155 16314081 52 + 16417988 TCTTCATTTCTCCAATTTCTAGTCT--ATTTCTTTGTTTTTATTGACATAAGCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 101917 51 - 306014 TCTTCATTTCTCCAATTTCTAGTCT--ATTTCTTTGTTTTTATTGACAT-AGCT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2134087 46 - 2165740 CCTTCAATTCTCCAATTTTAAA--------TCTACATTTTTTTTTATATAACCC i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11959646 54 + 42124431 TCTTAAATTCTTCAATTTCAACTTTAAATATATTTGTTTTTATCGATATAAGCC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 380764 44 - 913073 TTTTAAATTCTAAAACCTGAAC----------TTCATTTTTATTGACATAAGCC i dasNov3.JH577625 I 7895 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144138 448 - 211231 I e macNem1.NW_012013899v1 80324 855 + 100774 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=346520.000000 s hg38.chr3_KI270934v1_alt 132512 75 + 163458 AATTTA----G---TTTTTTCTTTTTTCAGAAAAT-------------GAGAAAGAACGAATATTCTTCTACCTTAGTATAATTTTTTACATGGT s panPan2.chrUn_NW_014024201v1 185254 74 - 190779 AATTTA----G----TTTTTCTTTTTTCAGAAAAT-------------GAGAAAGAACGAATATTCTTCTACCTTAGTATAATTTTTTACATGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 25443 75 + 880730 AATTTA----G---TTTTTTCTTTTTTCAGAAAAT-------------GAGAAAGAACGAATATTCTTCTACCTTAGTATAATTTTTTACATGGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856212 78 - 180051392 AATTCA----G---TTTTTTCTTTTTTCAGAAAATAAAC---------GAGAAAGAACAAATATTCTTC-ACTTTAACATAATTTTTGTCATGGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1325275 79 + 181584905 AATTCA----G---TTTTTTCTTTTTTCAGAAAATAAAC---------GAGAAAGAACAAATATTCTTCTACTTTAACATAATTTTTGTCATGGT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 40497 79 - 218577 AATTCA----G---TTTTTTCTTTTTTCAGAAAATGAAT---------GAGAAAGAACAAATATTCTTCCACCTTAGTATAATTTTTGACAAAGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1418077 79 + 91010382 AATTCA----G---TTTTTTCTTTTTTCAGAAAATAAAT---------GAGAAAGAACAAATATTCTTCTACCTTAACATAATTTTTGTCATGGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 900717 79 - 930449 AATTCA----G---TTTTTTCTTTTTTCAGAAAATGAAT---------GAGAAAGAACAAATATTCTTCCACCTTAGTATAATTTTTGACAAAGT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 819045 83 - 1687011 AATTCAGTTTG---TTTTTTCTTTTTTCAGAAAATGAAC---------GCGAAAGAACAAATATTCTTCTACCTTAACATAATTTTTGACATGGT i colAng1.NW_012116910v1 C 0 C 0 s saiBol1.JH378155 16314133 76 + 16417988 AATTTA----GGGTTTTTTCTTTTTTTCAGAAAAT-------------GAATTAGAACAAATATTCTTCCTCCTTAGTATA--TTTTTAAATAGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 101968 77 - 306014 AATTTA----GGATTTTTTCTTTTTTTCAGAAAAT-------------GAATTAGAACAAGTATTCTTCCTCCTTAGTATG-TTTTTTAAATGGT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2134133 87 - 2165740 AATTTA----G-GTTTTTCCTTTTTCTCAGAAAGTAAATTTAAAAAAGTAAAAAGAACAAATATT-TCCTGCCTTAGTATAATTTT--AAACGGT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11959700 73 + 42124431 -----------------AATTTTTCCCCAGAAAATGAATCTAA-----AAACTAAAAAGAATATTCTTCTGTTTTAGTATAATTTTAAAATTGGT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 380808 74 - 913073 AATTCA----A-------TGGTTTTTTCAGAACAGGACT---------AAAAAAGAACAAAGATT-TTCTACCTTAGTATAATTTTTAAAGTGGT i dasNov3.JH577625 C 0 I 19 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144138 448 - 211231 I e macNem1.NW_012013899v1 80324 855 + 100774 M e calJac3.chr2 204172306 283 + 204313951 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=91031.000000 s hg38.chr3_KI270934v1_alt 132587 15 + 163458 AAAATCATATTTTAA s panPan2.chrUn_NW_014024201v1 185328 15 - 190779 AAAATCATATTTTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 25518 14 + 880730 AAAATCATA-TTTAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856290 15 - 180051392 AAAATCATATTTTAA i rheMac8.chr6 C 0 I 133 s macFas5.chr6 1325354 15 + 181584905 AAAATCATATTTTAA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 40576 15 - 218577 AAAATCATATTTTAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1418156 15 + 91010382 AAAATCATATTTTAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 900796 15 - 930449 AAAATCATATTTTAA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 819128 15 - 1687011 AAAATCATATTTTAA i colAng1.NW_012116910v1 C 0 C 0 s saiBol1.JH378155 16314209 15 + 16417988 AAAATCCTATTTTAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 102045 15 - 306014 AAAATCCTATTTTAA i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2134220 15 - 2165740 AAAATCACATTTTAC i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11959773 15 + 42124431 AAAATCATATCTTAA i canFam3.chr34 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 380882 19 - 913073 I e macNem1.NW_012013899v1 80324 855 + 100774 M e calJac3.chr2 204172306 283 + 204313951 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=5159.000000 s hg38.chr3_KI270934v1_alt 132602 1 + 163458 G s panPan2.chrUn_NW_014024201v1 185343 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 25532 1 + 880730 G i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 1325369 1 + 181584905 G i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 40591 1 - 218577 G i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1418171 1 + 91010382 G i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 900811 1 - 930449 G i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 819143 1 - 1687011 G i colAng1.NW_012116910v1 C 0 C 0 s saiBol1.JH378155 16314224 1 + 16417988 G i saiBol1.JH378155 C 0 I 4 s cebCap1.NW_016108150v1 102060 1 - 306014 G i cebCap1.NW_016108150v1 C 0 I 4 s otoGar3.GL873745 2134235 1 - 2165740 G i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11959788 1 + 42124431 A i canFam3.chr34 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 380882 19 - 913073 I e macNem1.NW_012013899v1 80324 855 + 100774 M e calJac3.chr2 204172306 283 + 204313951 I e rheMac8.chr6 179856305 133 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=389607.000000 s hg38.chr3_KI270934v1_alt 132603 80 + 163458 AAAGAAGTCTTTGAAATAATTTTAATAAAAACGTTCTTGAAAATTTTGTAAAGTGCCCTATTAACATAGGTAATAGCACC s panPan2.chrUn_NW_014024201v1 185344 80 - 190779 AAAGAAGTCTTTGAAATAATTTTAATAAAAACGTTCTTGAAAATTTTGTAAAGTGCCCTATTAACATAGGTAATAGCATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 25533 80 + 880730 AAAGAAGTCTTTGAAATAATTTTAATAAAAACGTTCTTGAAAATTTTGTAAAGTGCCCTATTAACATAGGTAGTAGCACC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856438 80 - 180051392 aaagaaGTCTTTGAAATAATTTTAATACAAACTTTCTTGAAACTTTTGTAAACTGCCCTATTAACACAGGTAACAGCACC i rheMac8.chr6 I 133 C 0 s macFas5.chr6 1325370 80 + 181584905 AAATAAGTCTTTGAAATAATTTTAATATAAATGTTCTTGAAACTTTTGTAAACTGCCCTATTAACACAGGTAACAGCACC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 40592 80 - 218577 AAAGAAGTCTTTGAAATAATTTTAATACAAACTTTCTTGAAACTTTTGTAAACTGCCCTATTAACACAGGTAACAGCACC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1418172 80 + 91010382 AAATAAGTCTTTGAAATAATTTTAATACAAATGTTCTTGAAACTTTTGTAAACTGCCCTATTAACACAGGTAACAGCACC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 900812 80 - 930449 AAAGAAGTCTTTGAAATAATTTTAATACAAACTTTCTTGAAACTTTTGTAAACTGCCCTATTAACACAGGTAACAGCACC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 819144 80 - 1687011 AAAGAAGTCTTTGAAATAATTTTAATACAAATGTTCTTGAAACTTTTGTAAACCGCCCTATTAACACAGGTAACAGCACC i colAng1.NW_012116910v1 C 0 C 0 s saiBol1.JH378155 16314229 79 + 16417988 AATGAAGCTTTTGAAAT-ATCTAAATACAAACATTCTTGAAAATGTTGTAAAGTGCTCTATTGACATAGATAATAGTTCC i saiBol1.JH378155 I 4 C 0 s cebCap1.NW_016108150v1 102065 79 - 306014 AATGAAGCTTTTGAAAT-ATCTAAATACGAACGTTCTTGAAAATTTTGTAAAGTGCTCTATTAACATAGGTAATAGTTCC i cebCap1.NW_016108150v1 I 4 C 0 s otoGar3.GL873745 2134236 62 - 2165740 ------ATCTTTGAAAGAATTTTAATACAAACACTCTTGAA--------AAAGCACCATATTAACA----TAACAGCACC i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11959789 69 + 42124431 ---CAAGTC----AGAGAATTTTAATACAAATGTTCTTGAAAATTTTATAAAGTACAGTAT----AAAGGTATTAGCTTC i canFam3.chr34 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 380882 19 - 913073 I e macNem1.NW_012013899v1 80324 855 + 100774 M e calJac3.chr2 204172306 283 + 204313951 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=162804.000000 s hg38.chr3_KI270934v1_alt 132683 31 + 163458 AATAAAAACAGTA-----CATT-----ATACCAAATGTAAG------ s panPan2.chrUn_NW_014024201v1 185424 31 - 190779 AATAAAAACAGTA-----TATT-----ATACCAAATGTAAG------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 25613 31 + 880730 AATAAAAACAGTA-----TTTT-----ATACCAAATGTAAG------ i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856518 31 - 180051392 AATAACAACAGTG-----TATT-----ACACCAACTGTAAG------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1325450 31 + 181584905 AATAACAACAGTG-----TATT-----ACACCAACTGTAAG------ i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 40672 31 - 218577 AATAACAACAGTG-----TATT-----ACACCAACTGTAAG------ i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1418252 31 + 91010382 AATAACAACAGTG-----TATT-----ACACCAAATGTAAG------ i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 900892 31 - 930449 AATAACAACAGTG-----TATT-----ACACCAACTGTAAG------ i manLeu1.NW_012107609v1 C 0 I 3655 s colAng1.NW_012116910v1 819224 31 - 1687011 AATAACAACAGTG-----TATT-----ACACCAAATGTAAG------ i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204172589 31 + 204313951 aaaaaaaaCAGTA-----TGCT-----ATATCAAATGTAAA------ i calJac3.chr2 I 283 C 0 s saiBol1.JH378155 16314308 31 + 16417988 AATAAGAACAGTA-----TGTT-----ATACCAAATGTAAG------ i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 102144 31 - 306014 AACAAGAACAGTA-----TATT-----ATACCAAATGTAAA------ i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2134298 35 - 2165740 AATAAGACTAGTGCATTTTGTT-----ATAACGAA-GTAAA------ i otoGar3.GL873745 C 0 I 1 s canFam3.chr34 11959858 42 + 42124431 AAAAAGAACAGTA-----TATTTTGCAATACCAAACCGAAATTAAAA i canFam3.chr34 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 380882 19 - 913073 I e macNem1.NW_012013899v1 80324 855 + 100774 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=124632.000000 s hg38.chr3_KI270934v1_alt 132714 17 + 163458 TAGAAACAGTGAGATCA s panPan2.chrUn_NW_014024201v1 185455 17 - 190779 TAGAAACAGTGAGATCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 25644 17 + 880730 TAGAAACAGTGAGATCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856549 17 - 180051392 TAGAAACAGTGAGATCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1325481 17 + 181584905 TAGAAACAGTGAGATCA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 40703 17 - 218577 TAGAAACAGTGAGATCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1418283 17 + 91010382 TAGAAACAGTGAGATCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 904578 17 - 930449 TAGAAACAGTGAGATCA i manLeu1.NW_012107609v1 I 3655 C 0 s colAng1.NW_012116910v1 819255 17 - 1687011 TAGAAACAGTGAGATCA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204172620 17 + 204313951 TAGAAACAGTGAGGTCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16314339 17 + 16417988 TAGAAACAGTGAGGTCA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 102175 17 - 306014 TAGAAACAGTGAGGTCA i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2134334 17 - 2165740 TAGAAATAATGATATCT i otoGar3.GL873745 I 1 C 0 s canFam3.chr34 11959900 17 + 42124431 TAGAAACCATGAGTCCA i canFam3.chr34 C 0 I 1445 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 380882 19 - 913073 I e macNem1.NW_012013899v1 80324 855 + 100774 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=469999.000000 s hg38.chr3_KI270934v1_alt 132731 112 + 163458 CTAAATGTTTATTCGTTCTTTCTAGGATGTTGATGTGGAATACACAC-----TGCCCACTCCCC-AC--CACACACACACACAGCTGCCTT-AAAAG-GGGCAGCTACTAT-AACACAATCTT s panPan2.chrUn_NW_014024201v1 185472 112 - 190779 CTCAATGTTTATTCGTTCTTTCTAGGATGTTGATGTGGAATACACAC-----TGCCCACCTCCC-AC--CACACACACACACAGCTGGCTT-AAAAG-GGGCAGCTACTAT-AACACAATCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 25661 113 + 880730 CTCAATGTTTATTCGTTCTTTCTAGGATGTTGATGTGGAATACACAC-----TGCCCACCCCCC-AC--CACACACACACACAGCGGGCTT-AAAAG-GGGCAGCTACTATAAACACAATCTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856566 110 - 180051392 CTAAA-GTTTATTTGTTCTTTCTAGGATGCTGACATGGAATGCCCAC-----TGCCTGCCCCG--GC--CACACACACATAGAGCCAGCTT-AGAAG-GGGCAGCTCCCAT-AACACAACCGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1325498 110 + 181584905 CTAAA-GTTTATTTGTTCTTTCTAGGATGCTGACATGGAATGCCCAC-----TGCCCGCCCCG--GC--CACACACACATAGAGCCAGCTT-AGAAG-GGGCAGCTCCCAT-AACACAACTGT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 40720 110 - 218577 CTAAA-GTTTATTTGTTCTTTCTAGGATGCTGACGTGGAATGCCCAC-----TGCCCGCCCCG--GC--CACACACACACAGAGCCAGCTT-AGAAG-GGGCAGCTCCCAT-AACACAACCGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1418300 111 + 91010382 CTAAATGTTGATTTGTTCTTTCTAGGATGCTGACGTGGAATACCCAC-----TGCCCACCCCC--GC--CACACACACACAGAGCCAGCTT-AAAAG-GGGCAGCTCCCAT-AACACAACCGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 904595 110 - 930449 CTAAATGTTGATTTGTTCTTTCTAGGATGCTGACGTGGAATACCCAC-----TGCCCACCCCCA-GC--CACACACACACAGAGCCAGCTT-AAAAG-GGGCAGCTCCCAT-AACACAAC--T i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 819272 114 - 1687011 CTAAATATTTATTTGTTCTTTCCAGGATGCTGACGTGGAATACCCAC-----TGCCCGCCCCCC-GCCACACACACACACAGAGCCAGCTT-AAAAG-GGGCAGCTCCCAT-AACACAACCGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204172637 104 + 204313951 CTAAATGTTTATTTGTTCTCTCTAGAATGTTCATGTGGAATACCCC---------CCACCCCAC--C--CCTGC---CGCAGACCTAGCTT-AAAAG-GCGCAGCTACTAT-AATAAAATCTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16314356 109 + 16417988 CTAAGTGTTTATTTGTTCTTTCTAGAATGTTCATGTGGAATACCCC--------TCCACCCCACAAC--CCTGC-CACACAGACCTAGCTT-AAAAG-GGGCAGCTAGTAT-AACAAAATCTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 102192 109 - 306014 CTAAGTCTTTATTTGTTCTTTCTAGAATGTTCATGTGGAATACCCC--------TCCACCCCTCAAC--CCCGC-CACACAGACCTAGCTT-AAAAG-AGGCAGCTACTAT-AACAAAATCTT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2134351 89 - 2165740 CTTAGTAT---TTCCTTTTTTCTAGGATATTCACGTTGAAGGT----------------------AC--CCTTCTCACA-----CTAGTTT-AAACGCTGGCAACTAGTCT-AATGCAATTTT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11961362 118 + 42124431 CTAAGCATTTGTTTCTTCTTTCTAAGATGTTCATGTTGAATAAGGacacatatacacatacaca-ca--catacacacacatGGCTAGCTTCAACAG-TGGCAGCTATTAT-CATGAAATCtt i canFam3.chr34 I 1445 I 722 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 380882 19 - 913073 I e macNem1.NW_012013899v1 80324 855 + 100774 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=812405.000000 s hg38.chr3_KI270934v1_alt 132843 162 + 163458 GAACAAATCATCACGCCATCCCCCTGGGG----AAAAGGACACTAACCCTCTGCATCTAAATCTCA---------TCTGGGGCAGATTTTTGAATCTG-----------------------GAAAGCCC-----AACTTCAAGCCAATGTCAGTCTTTAGATAAAACTCAAAACTACTTTTGACACAAAACTAGTCTTTTGT--G s panPan2.chrUn_NW_014024201v1 185584 162 - 190779 GAACAAATCATCACGCCATCCCCCCGGGG----AAAAGGACACTAACCCTCTGCATCTAAATCTCA---------TCTGGGGCAGATTTTTGAATCTG-----------------------GAAAGCCC-----AACTTTAAGCCAATGTCAGTCTTTAGATAAAACTCAAAACTACTTTTGACACAAAACTAGTCTTTTGT--G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 25774 162 + 880730 GAACAAATCATCACGCCATCCCCCTGGGG----AAAAGGACACTAACCCTCTGCATCTAAATCTCA---------TCTGGGGCAGATTTTTGAATCTG-----------------------GAAAGCCC-----AACTTCAAGCCAATGTCAGTCTTTAGATAAAACTCAAAACTACTTTTGACACAAAACTAGTCTTTTGT--G i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856676 161 - 180051392 GAACAAATTATCACGCCATCCCCTTGGGG----ACAAGGACACTCACCCTCTGTGTCTAAATCTAA---------TCTGGGGCAGAGTTTTGAATGT------------------------GAAAGCCC-----AACTTTAAGCCAATTTCAGTCTTTAGATAAAACTGAAAACTAGTTTTGACACAAGACTAGTCTTGTGT--G i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1325608 161 + 181584905 GAACAAATTATCACGCCATCCCCTTGGGG----ACAAGGACACTCACCCTCTGCGTCTAAATCTAA---------TCTGGGGCAGAGTTTTGAATGT------------------------GAAAGCCC-----AACTTTAAGCCAATTTCAGTCTTTAGATAAAACTGAAAACTAGTTTTGACACAAGACTAGTCTTGTGT--G i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 40830 160 - 218577 GAACAAATTATCACGCCATCCCC-TGGGG----ACAAGGACACTCACCCTCTGTGTCTAAATCTAA---------TCTGGGGCAGAGTTTTGAATGT------------------------GAAAGCCC-----AACTTTAAGCCAATTTCAGTCTTTAGATAAAACTGAAAACTAGTTTTGACACAAGACTAGTCTTGTGT--G i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1418411 161 + 91010382 GAACAAATTATCAAGCCATCCCTTTGGGG----ACAAGGACACTCACCCTCTACGTCTAAATCTAA---------TCTGGGGCAGAGTTTTGAATTT------------------------GAAAGCCC-----AACTTTAAGCCAATTTCAGTCTTTAGATAAAACTGAAAACTAGTTTTGACACAAGACTAGTCTTGTGT--G i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 904705 160 - 930449 GAACAAATTATCACGCCATCCC-CTGGGG----ACAAGGACACTCATCCTCTGAGTCTAAATCTAA---------TCTGGGGCAGAGTTTTGAATTT------------------------GAAAGCCC-----AACTTTAAGCCAATTTCAGTCTTTAGATAAAACTGAAAACTAGTTTTGACACAAGACTAGTCTTGTGT--G i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 819386 161 - 1687011 GAACAAATTATCACGCCATCCTCCTGGGG----ACAAGGACACTCACCCTCTGTGTCTAAATCTAA---------TCTGGGGTAGAGTTTTGAATTT------------------------GAAAGCCC-----AACTTTAAGCCAATTTCAGTCTTTAGATAAAACTGAAAACTAGTTTTATCACAAGACTAGTCTTGTGT--G i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204172741 163 + 204313951 TAACAAATTACTACGCCATCCCCCTGGAG----AAAAAGGCACTGACCCTTTGCATCT-AATCTAA---------CCTGGGGGAGATTTTTGAATTTG-----------------------GAAAGCCC-----AACTTTAAGCCAATTTCAGTCTTTAGATAAAATTGAAAACTAGTTTTGACACAAAACTAATCTTTTTTTGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16314465 164 + 16417988 TAAGAAATTACTATGCCAACCCCTTGGAG----AAAAGGGCACTAACCCTTTGCATCTAAATCTAA---------TCTGGGGGAGATTTTTGAATTTG-----------------------GAAAGCCC-----AACTGTAAGCCAATTTCAGTCTTTAGAGAAAACTGAAAACTAGTTTTGACACAAAATTAGTCTTTTTTTTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 102301 158 - 306014 TAAGAAATTACTATGCCATCCCCTTGGAG----AAAAGGGCACTAACCCTTTGCATCTAAATCTA--------------GGGGAGATTTTTGAATTTG-----------------------GAAAGCCC-----AACTGTAAGCCAATTTCAGTCTTTAGAGAAAACTGAAAACTAGTTTTGACACGAAACTAGTCTTTTTTTC- i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2134440 174 - 2165740 AAACAAATCATCACATCATCTCCCCGGTGGAAAACAATGATACTAAACCTTTAAGTATAAATCTAATTATCCATTTTTGGGGGAGATTTTAGAATTTGGAGTTATAAATACAGAATGAGCTGAAAACACTATAGAACT---GACCAATTTCTGTCTTGAGATAAAACTCA--------------------------TTTTGT--G i otoGar3.GL873745 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 380882 19 - 913073 I e macNem1.NW_012013899v1 80324 855 + 100774 M e canFam3.chr34 11961480 722 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=70032.000000 s hg38.chr3_KI270934v1_alt 133005 17 + 163458 CCAATTATTAA----------TTTTTT s panPan2.chrUn_NW_014024201v1 185746 18 - 190779 CCAATTATTAA---------TTTTTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 25936 18 + 880730 CCAGTTATTAA---------TTTTTTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856837 17 - 180051392 CCAATTATTAA---------TTTTTT- i rheMac8.chr6 C 0 I 1 s macFas5.chr6 1325769 13 + 181584905 CCAATT----A---------TTTTTT- i macFas5.chr6 C 0 I 1 s cerAty1.NW_012004452v1 40990 17 - 218577 CCAATTATTAA---------TTTTTT- i cerAty1.NW_012004452v1 C 0 I 1352 s chlSab2.chr4 1418572 17 + 91010382 CCAATTATTAA---------TTTTTT- i chlSab2.chr4 C 0 I 1 s manLeu1.NW_012107609v1 904865 17 - 930449 CCAATTATTAA---------TTTTTT- i manLeu1.NW_012107609v1 C 0 I 1 s colAng1.NW_012116910v1 819547 17 - 1687011 CCAATTATTAA---------TTTTTT- i colAng1.NW_012116910v1 C 0 I 1 s calJac3.chr2 204172904 17 + 204313951 TCAATTATTAA---------TTTTTT- i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 16314629 18 + 16417988 TCAATTATTAA--------TTTTTTT- i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 102459 15 - 306014 TCAATTATT-----------TTTTTT- i cebCap1.NW_016108150v1 C 0 I 1 s otoGar3.GL873745 2134614 26 - 2165740 TCACTTGTTAAATTTAGTATTTTTTT- i otoGar3.GL873745 C 0 I 3 s canFam3.chr34 11962202 19 + 42124431 ccACTTACTAA-------CATTTTTT- i canFam3.chr34 I 722 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 380882 19 - 913073 I e macNem1.NW_012013899v1 80324 855 + 100774 M e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=313163.000000 s hg38.chr3_KI270934v1_alt 133022 77 + 163458 AGGAGAAACTATCAAACATTTCCT------------CTAAGAAAAAACAT-GGGGAA---CATATAACTAAAAGGAATACTT---------AGACCTTGCTT s panPan2.chrUn_NW_014024201v1 185764 77 - 190779 AGGAGAAACTATCAAACATTTCCT------------CTAAGAAAAAAAATAGGGGAA---CATATAACT-AAAGGAATACTT---------AGACCTTGCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 25954 77 + 880730 AGGAGAAACTATCAAACATTTCCT------------CTAAGAAAAAACAT-GGGGAA---CATATAACTAAAAGGAATACTT---------AGACCTTGCTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856855 71 - 180051392 AGGAGAAACAATCAAACATTTCCT------------CTAAGAAAAAA-AT-GGGGAA---TATATA----AAAGGAATA-TT---------AGACCTTGCTT i rheMac8.chr6 I 1 C 0 s macFas5.chr6 1325783 71 + 181584905 AGGAGAAACTATCAAACATTTCCT------------CTAAGAAAAAA-AT-GGGGAA---TATATA----AAAGGAATA-TT---------AGACCTTGCTT i macFas5.chr6 I 1 C 0 s chlSab2.chr4 1418590 71 + 91010382 AGGAGAAACTATCAAACATTTCCT------------CTAAGAAAAAA-AT-TGGCAA---CATATA----AAAGGAATA-TT---------AGACTTTGTTT i chlSab2.chr4 I 1 C 0 s manLeu1.NW_012107609v1 904883 71 - 930449 AGGAGAAACTATCAAACATTTCCT------------CTAAGAAAAAA-AT-TGGGAA---CATATA----AAAGGAATA-TT---------AGACTTTGCTT i manLeu1.NW_012107609v1 I 1 C 0 s colAng1.NW_012116910v1 819565 71 - 1687011 AGGAGAAACTATCAAACATTTCCT------------CTAAGAAAAAA-AT-GGGGAA---CATATA----AAAGGAATA-TT---------AGACCTTGCTT i colAng1.NW_012116910v1 I 1 C 0 s calJac3.chr2 204172922 74 + 204313951 AGGAGAAACTATTAAACATTTCCT------------CTAAGAAAA---AT-GGGGAA---CATATAACTAAAAGGAAAAGTT---------AGACCTTGCTT i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 16314648 74 + 16417988 AGGAGAAGCTATCAAACATTTCCA------------CTAAGAAAA---AT-GGGGAA---CATATAACTAAAAGGAAAAGTT---------AGACCTTGCTT i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 102475 74 - 306014 AGGAGAAACTATCAAACATTTCCT------------CTAAGAAAA---AT-GAGGAA---CACATAACTAAAAGGAAAAGTT---------AGACCTTGCTT i cebCap1.NW_016108150v1 I 1 C 0 s otoGar3.GL873745 2134643 89 - 2165740 AGAAGAACCTATCAAACATTTTCTAATGGGACAACATGAAGAAGA---AT-GAGGAAATCCACCTAACTAGAAGTAATCCTT---------CGACCTTGTTT i otoGar3.GL873745 I 3 C 0 s canFam3.chr34 11962221 92 + 42124431 AAGTTAAAGCTTCAAGCATTTTCCAACAGAACAA--CATAGAGAAGA-AT-GAGGAA----ATCTACCTAAGAGGTAAAATTAAAGGAAACAGACCTT--TT i canFam3.chr34 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144138 448 - 211231 I e dasNov3.JH577625 380882 19 - 913073 I e macNem1.NW_012013899v1 80324 855 + 100774 M e cerAty1.NW_012004452v1 41007 1352 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=57346.000000 s hg38.chr3_KI270934v1_alt 133099 11 + 163458 AACAATACAGA s panPan2.chrUn_NW_014024201v1 185841 11 - 190779 AACAATACAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26031 11 + 880730 AACTATACAGA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856926 11 - 180051392 AACAATATGGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1325854 11 + 181584905 AACAATATGGA i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1418661 11 + 91010382 AACAATATAGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 904954 11 - 930449 AACAATATAGA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 819636 11 - 1687011 AACAATATGTA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204172996 11 + 204313951 AACAATATAGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16314722 11 + 16417988 AACAATATAGA i saiBol1.JH378155 C 0 I 938 s cebCap1.NW_016108150v1 102549 11 - 306014 AACAATACAGA i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2134732 11 - 2165740 AACAATATTCA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11962313 11 + 42124431 AATGGCAGGAA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 380901 11 - 913073 AATAGCATAAA i dasNov3.JH577625 I 19 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144138 448 - 211231 I e macNem1.NW_012013899v1 80324 855 + 100774 M e cerAty1.NW_012004452v1 41007 1352 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=38373.000000 s hg38.chr3_KI270934v1_alt 133110 10 + 163458 ATTTC-AGAT-G s panPan2.chrUn_NW_014024201v1 185852 12 - 190779 ATTTCAAGATAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26042 10 + 880730 ATTTC-AGAT-G i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856937 10 - 180051392 ATTTC-AGAC-G i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1325865 10 + 181584905 ATTTC-AGAC-A i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1418672 10 + 91010382 ATTTC-AGAT-G i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 904965 10 - 930449 ATTTC-AGAC-G i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 819647 10 - 1687011 ATTTC-AGAC-G i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204173007 10 + 204313951 ATTTC-AGAC-G i calJac3.chr2 C 0 I 394 s cebCap1.NW_016108150v1 102560 10 - 306014 ATTTC-AGAT-G i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2134743 10 - 2165740 AGTTC-AAAT-G i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11962324 10 + 42124431 AGCAC-AGGT-G i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 380912 10 - 913073 AGTAG-AGAT-G i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144138 448 - 211231 I e macNem1.NW_012013899v1 80324 855 + 100774 M e saiBol1.JH378155 16314733 938 + 16417988 I e cerAty1.NW_012004452v1 41007 1352 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=40339.000000 s hg38.chr3_KI270934v1_alt 133120 14 + 163458 ACTGAATCAGGAGG s panPan2.chrUn_NW_014024201v1 185864 14 - 190779 ACTGAATCAGGAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26052 14 + 880730 ACTGAATCAGGAGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856947 14 - 180051392 ACTGAATTAGGAGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1325875 14 + 181584905 ACTGAATTAGGAGC i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1418682 14 + 91010382 ACTGAATTAGGAGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 904975 14 - 930449 ACTGAATTAGGAGG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 819657 14 - 1687011 ACTGAATTAGGAGG i colAng1.NW_012116910v1 C 0 C 0 s cebCap1.NW_016108150v1 102570 14 - 306014 ACTGAATTAGGAGG i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2134753 12 - 2165740 ACAGAATTAAGG-- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11962334 12 + 42124431 AATGA--CAGTAAA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 380922 6 - 913073 ACTGAA-------- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144138 448 - 211231 I e macNem1.NW_012013899v1 80324 855 + 100774 M e saiBol1.JH378155 16314733 938 + 16417988 I e calJac3.chr2 204173017 394 + 204313951 I e cerAty1.NW_012004452v1 41007 1352 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=33828.000000 s hg38.chr3_KI270934v1_alt 133134 8 + 163458 --TGGAGGGG s panPan2.chrUn_NW_014024201v1 185878 8 - 190779 --TGGAGGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26066 8 + 880730 --TGGAGGGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856961 8 - 180051392 --TGGAGGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1325889 8 + 181584905 --TGGAGGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 81179 8 + 100774 --TGGAGGGG i macNem1.NW_012013899v1 M 855 C 0 s chlSab2.chr4 1418696 8 + 91010382 --TGGAGGGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 904989 8 - 930449 --TGGAGGGA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 819671 8 - 1687011 --TGGAGGGG i colAng1.NW_012116910v1 C 0 C 0 s cebCap1.NW_016108150v1 102584 8 - 306014 --TGGAGGGG i cebCap1.NW_016108150v1 C 0 I 1042 s otoGar3.GL873745 2134765 8 - 2165740 --TAGAAGTG i otoGar3.GL873745 C 0 I 5 s canFam3.chr34 11962346 5 + 42124431 -----AGGGA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 380928 7 - 913073 GTTGGAG--- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144138 448 - 211231 I e saiBol1.JH378155 16314733 938 + 16417988 I e calJac3.chr2 204173017 394 + 204313951 I e cerAty1.NW_012004452v1 41007 1352 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=3697.000000 s hg38.chr3_KI270934v1_alt 133142 5 + 163458 GAAAA s panPan2.chrUn_NW_014024201v1 185886 3 - 190779 --AAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26074 5 + 880730 GAAAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856969 3 - 180051392 GAA-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1325897 3 + 181584905 GAA-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 81187 3 + 100774 GAA-- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1418704 5 + 91010382 GGAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 904997 5 - 930449 GAAAA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 819679 5 - 1687011 GAAAA i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 2134778 3 - 2165740 AAA-- i otoGar3.GL873745 I 5 C 0 s canFam3.chr34 11962351 5 + 42124431 GAAAA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 380935 5 - 913073 GAAAA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144138 448 - 211231 I e saiBol1.JH378155 16314733 938 + 16417988 I e calJac3.chr2 204173017 394 + 204313951 I e cebCap1.NW_016108150v1 102592 1042 - 306014 I e cerAty1.NW_012004452v1 41007 1352 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=63358.000000 s hg38.chr3_KI270934v1_alt 133147 11 + 163458 GTAACAAGTGC s panPan2.chrUn_NW_014024201v1 185889 11 - 190779 GTAAGAAGTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26079 11 + 880730 GTAAGTAGTGC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856972 9 - 180051392 --AAGAAGTGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1325900 9 + 181584905 --AAGAAGTGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 81190 9 + 100774 --AAGAAGTGC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1418709 11 + 91010382 GTAAGAAGTGC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 905002 11 - 930449 GTAAGAAGTGC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 819684 11 - 1687011 GAAAGAAGTGC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204173411 11 + 204313951 GTAAGAAGTAT i calJac3.chr2 I 394 C 0 s saiBol1.JH378155 16315671 11 + 16417988 GTAAAAAGTGG i saiBol1.JH378155 I 938 C 0 s cebCap1.NW_016108150v1 103634 11 - 306014 GTAAGAAGTGT i cebCap1.NW_016108150v1 I 1042 C 0 s otoGar3.GL873745 2134781 11 - 2165740 GTAAGAAGGGT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11962356 6 + 42124431 -----AAGTGA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 380940 11 - 913073 GTAAAAAGGGC i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144138 448 - 211231 I e cerAty1.NW_012004452v1 41007 1352 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=660063.000000 s hg38.chr3_KI270934v1_alt 133158 96 + 163458 AGAGACATTCATATCCGAAATCTAGCAAAGTAAGGGGTCCTCATCGAATAAAATGCACCT---------------------ATAAATCATGAGCAAGAAACGAATCTGCATGTACAG s panPan2.chrUn_NW_014024201v1 185900 96 - 190779 AGAGACATTCATATCCGAAATCTAGCAAAGTAAGGGGTCCTCATCGAATAAAATGCACCT---------------------ATAAATCATGAGCAAGAAACGAATCTGCATGTACAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26090 96 + 880730 AGAGACATTCATATCCGAAATCTAGCAAAGTCAGGGGTCCTCATCGAATAAAATGCACCT---------------------ATAAATCATGAGCAAGAAACTAATCTGCAGGTACAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179856981 95 - 180051392 AGAGACATTAAT-TCCGAAATCTAGCAAAGTGAGGGGTCCTCATCTAATCAAATGCAACT---------------------ATAAATCATGAGAAAGAAACTAATCTGCATGTACAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1325909 95 + 181584905 AGAGACATTAAT-TCCGAAATCTAGCAAAGTGAGGGGTCCTCATCTAATCAAATGCAACT---------------------ATAAATCATGAGCAAGAAACTAATCTGCATGTACAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 81199 95 + 100774 AGAGACATTAAT-TCCGAAATCTAGCAAAGTGAGGGGTCCTCATCTAATCAAATGCAACT---------------------ATAAATCATGAGCAAAAAACTAATCTGCATGTACAA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1418720 95 + 91010382 AGAGACATTAAT-CCCGAAATCTACCAAAGTGAGGGGTCCTCATCTAATCAAATGCAACT---------------------ATAAATCATGAGCAAGAAACTAATCTGCACGTACAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 905013 95 - 930449 AGAGACATTAAT-CCCGAAATCTACCAAAGTGAGGGGTCCTCATCTAATCAAATGCAACT---------------------ATAAATCATGAGCAAGAAACTAATCTGCATGTACAA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 819695 95 - 1687011 AGAGACATTAAT-CCCGCAATCTACCAAAGTGAGGGGTCCTCATCTAATCAAATGCAACT---------------------ATAAATCATGAGCAAGAAACTAATCTGCATGTGCAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204173422 114 + 204313951 AGAGACACTAACATCCAAAATCTAGCAAAATAA-GAGTTCTCATCTAGTAAAATACATCTAATAAAATAAAATCTCATCTAATAAA--ATGGGTAAGAAATTAAACTGCAGGTACAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16315682 95 + 16417988 AGAGACACTAATATTCAAAATCTAGCAAAATAA-GAGTTCTCATCTAATAAGATGCACCT---------------------ATAAACCATGGGCAAGAAACTAAACTGCATGTACAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 103645 95 - 306014 AGAGACACTAATGTCCAAAATCTAGCAAAGTAA-GAGTTCTCATCTAATAAAATGCACCT---------------------ATAAACCATGGGCAAGAAACTAAACTGCATGTACAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 144586 95 - 211231 AGAGACACTAATATCCAAAATCTAGCAAAGTAA-GAGTTCTCATCTAATAAAATGCACCT---------------------ATAAACCACGGGCAAGAAACTAAACTGCATGTACAA i aotNan1.NW_018494784v1 I 448 C 0 s otoGar3.GL873745 2134792 94 - 2165740 --AGATATTAATATCCTCATTCTGGCAAAGAGGGGAGTCCTCATCTAATAAAAAACACCT---------------------ATAAATCATGAACAAGAAACTAATTTGTGGGTACAA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11962362 80 + 42124431 AGAGAAG------GGTGGAATCTAGCAAAGAGGACAGTCCTCATCTAGTAACAGGTATCT---------------------ATGAATCATGAAAAGGAAATTGATCT---------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 380951 90 - 913073 AGAGATGCTAATATCCTCA-TTTAGCAAAATGG-GAAACCTTGTCTAATAAAATGC-------------------------CTAAGTCacgaacaagaaattaatttgtgggtgcgg i dasNov3.JH577625 C 0 I 1338 e mm10.chr13 74345742 2297 + 120421639 I e cerAty1.NW_012004452v1 41007 1352 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=230810.000000 s hg38.chr3_KI270934v1_alt 133254 32 + 163458 CCTACA----CAATCACAAAAGCAGCCAACGAAGAA s panPan2.chrUn_NW_014024201v1 185996 32 - 190779 CCTACA----CAATCACAAAAGCAGCCAACGAAGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26186 32 + 880730 CCTACA----CAATCACAAAAGCAGCCAACGAAGAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179857076 32 - 180051392 CCCATA----CAATCACAAAAGCAGCCAGCGAAGAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1326004 32 + 181584905 CCCACA----CAATCACAAAAGCAGCCAGCGAAGAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 81294 32 + 100774 CCCACA----CAATCACAAAAGCAGCCAGCGAAGAA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1418815 32 + 91010382 CCCATA----CAATCACAAAAGCAGTCAGCGAAGAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 905108 32 - 930449 CCCACA----CAATCACAAAAGCAGCCAGCGAACAA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 819790 32 - 1687011 CCCATA----CAATCATAGAAGCAGCCAGTGAAGAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204173536 32 + 204313951 TCTGCA----CAATTACAAGAGCAGCCAACGAAGAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16315777 32 + 16417988 TCTATA----CGATTACAAAAGCAGCCAATGAAGAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 103740 32 - 306014 TCTATA----CGATTACAAAAGCAGCCAATGAAGAA i cebCap1.NW_016108150v1 C 0 I 1574 s aotNan1.NW_018494784v1 144681 32 - 211231 TCTATA----CAGTTACAAAAGCAGCCAATCAAGAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2134886 36 - 2165740 TCTACATAGGTAATTACAAAAGCAGCTGATAAAGGA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11962442 29 + 42124431 ---ACA----CAATCAGAAAAGCAGCCAATAAAGGA i canFam3.chr34 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e dasNov3.JH577625 381041 1338 - 913073 I e cerAty1.NW_012004452v1 41007 1352 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=44172.000000 s hg38.chr3_KI270934v1_alt 133286 6 + 163458 CCCAAA s panPan2.chrUn_NW_014024201v1 186028 6 - 190779 CCCAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26218 6 + 880730 CCCAAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179857108 6 - 180051392 CCTAAA i rheMac8.chr6 C 0 I 1164 s macFas5.chr6 1326036 6 + 181584905 CCTAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 81326 6 + 100774 CCTAAA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1418847 6 + 91010382 CCTAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 905140 6 - 930449 CCTAAA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 819822 6 - 1687011 CCTAAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204173568 6 + 204313951 CCTAAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16315809 6 + 16417988 TCTAAA i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 144713 6 - 211231 CCTAAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2134922 6 - 2165740 CCTAAA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11962471 6 + 42124431 TCTAAA i canFam3.chr34 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e dasNov3.JH577625 381041 1338 - 913073 I e cebCap1.NW_016108150v1 103772 1574 - 306014 I e cerAty1.NW_012004452v1 41007 1352 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=499.000000 s hg38.chr3_KI270934v1_alt 133292 2 + 163458 AA- s panPan2.chrUn_NW_014024201v1 186034 2 - 190779 AA- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26224 2 + 880730 AA- i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 1326042 2 + 181584905 CA- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 81332 2 + 100774 CA- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1418853 2 + 91010382 CA- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 905146 2 - 930449 CA- i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 819828 2 - 1687011 CA- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204173574 2 + 204313951 AA- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16315815 2 + 16417988 AA- i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 144719 2 - 211231 AA- i aotNan1.NW_018494784v1 C 0 I 1117 s otoGar3.GL873745 2134928 2 - 2165740 AA- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11962477 2 + 42124431 -AG i canFam3.chr34 C 0 I 4 e mm10.chr13 74345742 2297 + 120421639 I e dasNov3.JH577625 381041 1338 - 913073 I e cebCap1.NW_016108150v1 103772 1574 - 306014 I e cerAty1.NW_012004452v1 41007 1352 - 218577 I e rheMac8.chr6 179857114 1164 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=7513.000000 s hg38.chr3_KI270934v1_alt 133294 2 + 163458 CG s panPan2.chrUn_NW_014024201v1 186036 2 - 190779 CG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26226 2 + 880730 CG i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 1326044 2 + 181584905 CG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 81334 2 + 100774 CG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1418855 2 + 91010382 CG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 905148 2 - 930449 CG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 819830 2 - 1687011 CG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204173576 2 + 204313951 TA i calJac3.chr2 C 0 I 4 s saiBol1.JH378155 16315817 2 + 16417988 TG i saiBol1.JH378155 C 0 I 1076 s otoGar3.GL873745 2134930 2 - 2165740 TG i otoGar3.GL873745 C 0 I 1070 s canFam3.chr34 11962483 2 + 42124431 TG i canFam3.chr34 I 4 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144721 1117 - 211231 I e dasNov3.JH577625 381041 1338 - 913073 I e cebCap1.NW_016108150v1 103772 1574 - 306014 I e cerAty1.NW_012004452v1 41007 1352 - 218577 I e rheMac8.chr6 179857114 1164 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=22911.000000 s hg38.chr3_KI270934v1_alt 133296 6 + 163458 CACGAC s panPan2.chrUn_NW_014024201v1 186038 6 - 190779 CACGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26228 6 + 880730 CACGAC i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 1326046 6 + 181584905 CATGAC i macFas5.chr6 C 0 I 1148 s macNem1.NW_012013899v1 81336 6 + 100774 CATGAC i macNem1.NW_012013899v1 C 0 I 1352 s chlSab2.chr4 1418857 6 + 91010382 CATGAC i chlSab2.chr4 C 0 I 1148 s manLeu1.NW_012107609v1 905150 6 - 930449 CATGAC i manLeu1.NW_012107609v1 C 0 I 1148 s colAng1.NW_012116910v1 819832 6 - 1687011 CATGAC i colAng1.NW_012116910v1 C 0 I 1415 s calJac3.chr2 204173582 6 + 204313951 CACGAC i calJac3.chr2 I 4 I 1138 s canFam3.chr34 11962485 6 + 42124431 CATGAC i canFam3.chr34 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 144721 1117 - 211231 I e dasNov3.JH577625 381041 1338 - 913073 I e saiBol1.JH378155 16315819 1076 + 16417988 I e cebCap1.NW_016108150v1 103772 1574 - 306014 I e otoGar3.GL873745 2134932 1070 - 2165740 I e cerAty1.NW_012004452v1 41007 1352 - 218577 I e rheMac8.chr6 179857114 1164 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=10920.000000 s hg38.chr3_KI270934v1_alt 133302 1 + 163458 T s panPan2.chrUn_NW_014024201v1 186044 1 - 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26234 1 + 880730 T i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858278 1 - 180051392 T i rheMac8.chr6 I 1164 C 0 s macFas5.chr6 1327200 1 + 181584905 T i macFas5.chr6 I 1148 C 0 s macNem1.NW_012013899v1 82694 1 + 100774 T i macNem1.NW_012013899v1 I 1352 C 0 s cerAty1.NW_012004452v1 42359 1 - 218577 T i cerAty1.NW_012004452v1 I 1352 C 0 s chlSab2.chr4 1420011 1 + 91010382 T i chlSab2.chr4 I 1148 C 0 s manLeu1.NW_012107609v1 906304 1 - 930449 T i manLeu1.NW_012107609v1 I 1148 C 0 s colAng1.NW_012116910v1 821253 1 - 1687011 T i colAng1.NW_012116910v1 I 1415 C 0 s calJac3.chr2 204174726 1 + 204313951 T i calJac3.chr2 I 1138 C 0 s cebCap1.NW_016108150v1 105346 1 - 306014 T i cebCap1.NW_016108150v1 I 1574 C 0 s aotNan1.NW_018494784v1 145838 1 - 211231 T i aotNan1.NW_018494784v1 I 1117 C 0 s otoGar3.GL873745 2136002 1 - 2165740 T i otoGar3.GL873745 I 1070 C 0 s canFam3.chr34 11962491 1 + 42124431 T i canFam3.chr34 C 0 I 1098 s dasNov3.JH577625 382379 1 - 913073 T i dasNov3.JH577625 I 1338 C 0 e mm10.chr13 74345742 2297 + 120421639 I e saiBol1.JH378155 16315819 1076 + 16417988 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=90521.000000 s hg38.chr3_KI270934v1_alt 133303 9 + 163458 TTCTGTAGG s panPan2.chrUn_NW_014024201v1 186045 9 - 190779 TTCTGTAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26235 9 + 880730 TTCTGTAGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858279 9 - 180051392 TTCTGTAGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327201 9 + 181584905 TTCTGTAGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 82695 9 + 100774 TTCTGTAGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 42360 9 - 218577 TTCTGTAGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420012 9 + 91010382 TTCTGTAGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906305 9 - 930449 TTCTGTAGG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821254 9 - 1687011 TTCTGTAGG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204174727 9 + 204313951 TTCTGTAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16316895 9 + 16417988 TTCTGTAGG i saiBol1.JH378155 I 1076 C 0 s cebCap1.NW_016108150v1 105347 9 - 306014 TTCTGCAGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 145839 9 - 211231 TTCTGTAGG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2136003 9 - 2165740 TTCTGTAGG i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 382380 9 - 913073 TTCCCAAAG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e canFam3.chr34 11962492 1098 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=208959.000000 s hg38.chr3_KI270934v1_alt 133312 26 + 163458 AAAAGCTACCTTCATCAAGATAAAAA s panPan2.chrUn_NW_014024201v1 186054 24 - 190779 -AAAGCTACCTTCATCAAGAT-AAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26244 26 + 880730 AAAAGCTACCTTCATCAAGATAAAAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858288 24 - 180051392 AAAAGCTAAGTTCAT--AGATAAAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327210 24 + 181584905 AAAAGCTAAGTTCAT--AGATAAAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 82704 24 + 100774 AAAAGCTAAGTTCAT--AGATAAAAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 42369 24 - 218577 AAAAGCTAACTTCAT--AGATAAAAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420021 23 + 91010382 AAACGCTAACTTCA---AGATAAAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906314 24 - 930449 AAAAGCTAACTTCAT--AGATAAAAA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821263 23 - 1687011 AAACGCTAACTTCA---AGATAAAAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204174736 26 + 204313951 AAAAGCTGACTTCATCAATATAAAAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16316904 26 + 16417988 AAAAGCTGACTTCATCAAGATAAAAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 105356 26 - 306014 AAAAGCTGACTTCATCAAGATAAAAA i cebCap1.NW_016108150v1 C 0 I 91 s aotNan1.NW_018494784v1 145848 26 - 211231 AAAAGCTGACTTCATCAAGATAAAAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2136012 26 - 2165740 AGAAACTAGCTTCATCAAGATAAAAG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11963590 26 + 42124431 AAAAGCTATCTTCATCAAGATATAAA i canFam3.chr34 I 1098 C 0 s dasNov3.JH577625 382389 26 - 913073 AAAAGCTATCTTCATCAAGATAAACA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=-4279.000000 s hg38.chr3_KI270934v1_alt 133338 5 + 163458 GAC---TT s panPan2.chrUn_NW_014024201v1 186078 5 - 190779 GAC---TT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26270 5 + 880730 GAC---TT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858312 5 - 180051392 GAC---TT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327234 5 + 181584905 GAC---TT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 82728 5 + 100774 GAC---TT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 42393 5 - 218577 GAC---TT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420044 5 + 91010382 GAC---TT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906338 5 - 930449 GAC---TT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821286 5 - 1687011 GAC---TT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204174762 3 + 204313951 TAC----- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16316930 3 + 16417988 TAC----- i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 145874 5 - 211231 CACTT--- i aotNan1.NW_018494784v1 C 0 I 97 s otoGar3.GL873745 2136038 3 - 2165740 -AC---C- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11963616 5 + 42124431 GAC---TT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 382415 5 - 913073 ---CTCTT i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e cebCap1.NW_016108150v1 105382 91 - 306014 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=205644.000000 s hg38.chr3_KI270934v1_alt 133343 40 + 163458 TTACAAAACCCAAGA---------------CTAAATT---------------TTG----------------GTTCCATTTTG------CTAT------ s panPan2.chrUn_NW_014024201v1 186083 39 - 190779 TTAC-AAACCCAAGA---------------CTAAATT---------------TTG----------------GTTCCATTTTG------CTAT------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26275 40 + 880730 TAACAAAACCCAAGA---------------CTAAATT---------------TTG----------------GTTCCATTTTG------CTAT------ i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858317 40 - 180051392 TTACAAAACCCAAGA---------------CTAAATT---------------TTG----------------GTTAAATTTCG------CTAT------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327239 40 + 181584905 TTACAAAACCCAAGA---------------CTAAATT---------------TTG----------------GTTAAATTTCG------CTAT------ i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 82733 40 + 100774 TTACAAAACCCAAGA---------------CTAAATT---------------TTG----------------GTTAAATTTCG------CTAT------ i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 42398 40 - 218577 TTACAAAACCCAAGA---------------CTAAATT---------------TTG----------------GTTAAATTTCG------CTAT------ i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420049 40 + 91010382 TTACAAAACCCAAGA---------------CTAAATT---------------TTG----------------GTTCAATTTTG------CTAT------ i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906343 40 - 930449 TTACAAAACCCAAGA---------------CTAAATT---------------TTG----------------GTTCAACTTTG------CTAT------ i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821291 40 - 1687011 TTACAAAACCCAAGA---------------CTAAATT---------------TTG----------------GTTCAATTTTG------CTAT------ i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204174765 55 + 204313951 TTAAAAAACACAAGA---------------CCATATTTGGTAGGCCTAACTTTTG----------------GTTTAATTTTG------CTAT------ i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16316933 53 + 16417988 TTAAAAAACCCAAGA---------------CCATATTTGGTAGGCCTAAC--TTG----------------GTTTAATTTTG------CTAT------ i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 2136041 62 - 2165740 TAAAAAAACTAAAGA---------------CCAGATC---------------TTGGTAGCCTTAACTTATAGTTCTACTTTGCTATCTCTAT------ i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11963621 52 + 42124431 ---TAAGACCAAAGGCATCTTCTAGGAGGCCTAAGTG---------------GCG----------------GCTCAATTTTG------CTAT------ i canFam3.chr34 C 0 I 245 s dasNov3.JH577625 382420 58 - 913073 ----TAAACCCAAGA---------------CCATCTT---------------TAGGGAGGCCTAACTTACAGTTCAGTTTTG------CCACTTCTGT i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 145879 97 - 211231 I e cebCap1.NW_016108150v1 105382 91 - 306014 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=76094.000000 s hg38.chr3_KI270934v1_alt 133383 10 + 163458 CTTGCCATCT s panPan2.chrUn_NW_014024201v1 186122 10 - 190779 CTTGCCATCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26315 10 + 880730 CTTGCCATCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858357 10 - 180051392 CTTGCCATCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327279 10 + 181584905 CTTGCCATCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 82773 10 + 100774 CTTCCCATCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 42438 10 - 218577 CTTGCCATCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420089 10 + 91010382 CTTGCCATCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906383 10 - 930449 CTTGCCATCT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821331 10 - 1687011 CTTGCCATCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204174820 10 + 204313951 CTTGCCATTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16316986 10 + 16417988 CTTGCCGTTT i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 2136103 10 - 2165740 CTCACCATCT i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 382478 10 - 913073 CTTGCCATCT i dasNov3.JH577625 C 0 I 1060 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 145879 97 - 211231 I e cebCap1.NW_016108150v1 105382 91 - 306014 I e canFam3.chr34 11963673 245 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=29199.000000 s hg38.chr3_KI270934v1_alt 133393 5 + 163458 GGTCT s panPan2.chrUn_NW_014024201v1 186132 5 - 190779 GGTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26325 5 + 880730 GGTCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858367 5 - 180051392 TGTCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327289 5 + 181584905 TGTCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 82783 5 + 100774 TGTCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 42448 5 - 218577 TGTCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420099 5 + 91010382 TGTCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906393 5 - 930449 TGTCT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821341 5 - 1687011 TGTCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204174830 5 + 204313951 TGTCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16316996 5 + 16417988 TGTCT i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 2136113 5 - 2165740 TGTTT i otoGar3.GL873745 C 0 I 256 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 145879 97 - 211231 I e dasNov3.JH577625 382488 1060 - 913073 I e cebCap1.NW_016108150v1 105382 91 - 306014 I e canFam3.chr34 11963673 245 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=26752.000000 s hg38.chr3_KI270934v1_alt 133398 5 + 163458 GAGGT s panPan2.chrUn_NW_014024201v1 186137 5 - 190779 GAGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26330 5 + 880730 GAGGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858372 5 - 180051392 GAGGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327294 5 + 181584905 GAGGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 82788 5 + 100774 GAGGT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 42453 5 - 218577 GAGGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420104 5 + 91010382 GAGGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906398 5 - 930449 GAGGT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821346 5 - 1687011 GAGGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204174835 5 + 204313951 GAAGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16317001 5 + 16417988 GAAGC i saiBol1.JH378155 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 145879 97 - 211231 I e dasNov3.JH577625 382488 1060 - 913073 I e cebCap1.NW_016108150v1 105382 91 - 306014 I e canFam3.chr34 11963673 245 + 42124431 I e otoGar3.GL873745 2136118 256 - 2165740 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=19260.000000 s hg38.chr3_KI270934v1_alt 133403 3 + 163458 GCC s panPan2.chrUn_NW_014024201v1 186142 3 - 190779 GCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26335 3 + 880730 GCC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858377 3 - 180051392 GCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327299 3 + 181584905 GCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 82793 3 + 100774 GCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 42458 3 - 218577 GCC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420109 3 + 91010382 GCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906403 3 - 930449 GCC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821351 3 - 1687011 GCC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204174840 3 + 204313951 ACC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16317006 3 + 16417988 GCA i saiBol1.JH378155 C 0 C 0 s canFam3.chr34 11963918 3 + 42124431 GCC i canFam3.chr34 I 245 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 145879 97 - 211231 I e dasNov3.JH577625 382488 1060 - 913073 I e cebCap1.NW_016108150v1 105382 91 - 306014 I e otoGar3.GL873745 2136118 256 - 2165740 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=8281.000000 s hg38.chr3_KI270934v1_alt 133406 1 + 163458 T s panPan2.chrUn_NW_014024201v1 186145 1 - 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26338 1 + 880730 T i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858380 1 - 180051392 T i rheMac8.chr6 C 0 I 11 s macFas5.chr6 1327302 1 + 181584905 T i macFas5.chr6 C 0 I 11 s macNem1.NW_012013899v1 82796 1 + 100774 T i macNem1.NW_012013899v1 C 0 I 11 s cerAty1.NW_012004452v1 42461 1 - 218577 T i cerAty1.NW_012004452v1 C 0 I 11 s chlSab2.chr4 1420112 1 + 91010382 T i chlSab2.chr4 C 0 I 11 s manLeu1.NW_012107609v1 906406 1 - 930449 T i manLeu1.NW_012107609v1 C 0 I 11 s colAng1.NW_012116910v1 821354 1 - 1687011 T i colAng1.NW_012116910v1 C 0 I 11 s calJac3.chr2 204174843 1 + 204313951 T i calJac3.chr2 C 0 I 11 s saiBol1.JH378155 16317009 1 + 16417988 T i saiBol1.JH378155 C 0 I 11 s otoGar3.GL873745 2136374 1 - 2165740 T i otoGar3.GL873745 I 256 C 0 s canFam3.chr34 11963921 1 + 42124431 T i canFam3.chr34 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 145879 97 - 211231 I e dasNov3.JH577625 382488 1060 - 913073 I e cebCap1.NW_016108150v1 105382 91 - 306014 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=17165.000000 s hg38.chr3_KI270934v1_alt 133407 2 + 163458 -GG s panPan2.chrUn_NW_014024201v1 186146 2 - 190779 -GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26339 2 + 880730 -GG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858392 2 - 180051392 -GG i rheMac8.chr6 I 11 C 0 s macFas5.chr6 1327314 2 + 181584905 -GG i macFas5.chr6 I 11 C 0 s macNem1.NW_012013899v1 82808 2 + 100774 -GG i macNem1.NW_012013899v1 I 11 C 0 s cerAty1.NW_012004452v1 42473 2 - 218577 -AG i cerAty1.NW_012004452v1 I 11 C 0 s chlSab2.chr4 1420124 2 + 91010382 -GG i chlSab2.chr4 I 11 C 0 s manLeu1.NW_012107609v1 906418 2 - 930449 -GG i manLeu1.NW_012107609v1 I 11 C 0 s colAng1.NW_012116910v1 821366 2 - 1687011 -GG i colAng1.NW_012116910v1 I 11 C 0 s calJac3.chr2 204174855 2 + 204313951 -GG i calJac3.chr2 I 11 C 0 s saiBol1.JH378155 16317021 2 + 16417988 -GG i saiBol1.JH378155 I 11 C 0 s cebCap1.NW_016108150v1 105473 2 - 306014 -GG i cebCap1.NW_016108150v1 I 91 C 0 s otoGar3.GL873745 2136375 2 - 2165740 -GG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11963922 3 + 42124431 GAG i canFam3.chr34 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e aotNan1.NW_018494784v1 145879 97 - 211231 I e dasNov3.JH577625 382488 1060 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=53612.000000 s hg38.chr3_KI270934v1_alt 133409 7 + 163458 GGCCTTA s panPan2.chrUn_NW_014024201v1 186148 7 - 190779 GGCCTTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26341 7 + 880730 GGCCTTA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858394 7 - 180051392 GGTCTGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327316 7 + 181584905 GGTCTGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 82810 7 + 100774 GGCCTGA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 42475 7 - 218577 GGTCTGA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420126 7 + 91010382 GGTCTTA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906420 7 - 930449 GGTCTTA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821368 7 - 1687011 GGTCTGA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204174857 7 + 204313951 GGTCTTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16317023 7 + 16417988 GGTCTTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 105475 7 - 306014 GGTCTTG i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2136377 7 - 2165740 GGTCTTA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74348039 7 + 120421639 GGTCTTA i mm10.chr13 I 2297 C 0 s canFam3.chr34 11963925 7 + 42124431 GGTCGCA i canFam3.chr34 C 0 C 0 e aotNan1.NW_018494784v1 145879 97 - 211231 I e dasNov3.JH577625 382488 1060 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=375203.000000 s hg38.chr3_KI270934v1_alt 133416 45 + 163458 GTCTGCA-GAAGGAACACTGGGCACCA-TCTGGG------TTGGGGACAAAGG s panPan2.chrUn_NW_014024201v1 186155 45 - 190779 GTCTGCA-GAAGGAACACTGGGCACCA-TCTGGG------TTGGGGACAAAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26348 45 + 880730 GTCTGCA-GAAGGAACACTGGGCACCA-TCTGGG------TTGGGGACAAAGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858401 45 - 180051392 GGCTGCA-GGAGGAACACTGGGCACCA-TCTGGG------TTAAGGACAAAGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327323 45 + 181584905 GGCTGCA-GGAGGAACACTGGGCACCA-TCTGGG------TTAAGGACAAAGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 82817 45 + 100774 GGCTGCA-GGAGGAACACTGGGCACCA-TCTGGG------TTAAGGACAAAGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 42482 45 - 218577 GGCTGCA-GGAGGAACACTGGGCACCA-TCTGGG------TTAAGGACAAAGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420133 45 + 91010382 GGCTGCA-GAAGGAACACTGGGCACCA-TCTGGG------TTGACAGCAAAGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906427 45 - 930449 GGCTGCA-GAAGGAACACTGGGCACTA-TCTGGG------TTGAGGGCAAAGG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821375 45 - 1687011 GGCTGCA-GAAGGAACACTGGGCACCA-TCTGGG------TTGAGGACAAAGG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204174864 45 + 204313951 GTCTGCA-GAAGGAGCACCGGGCACCA-TCCGGG------ATGAGGACAAAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16317030 45 + 16417988 GTCTGCA-GAAGGAGCACGGGGCACCA-CCTGGG------ATGAGGACAAAGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 105482 45 - 306014 GTCTGCA-GAAGCAGCACGGGGCACCA-CCTGGG------ATGAGGACAAAGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 145976 45 - 211231 GTCTGCA-GAAGGAGCACCGGGCACCA-TCTGGG------ATGAGGACAAAGG i aotNan1.NW_018494784v1 I 97 I 41 s otoGar3.GL873745 2136384 46 - 2165740 GTCTACACAAAGGAACACTGGACACAA-TCCGGA------CTGAGAACAAACA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74348046 40 + 120421639 GTCTCCA-GAGGAATCACTGAGCACCAGCCTAGG------ACGAGGA------ i mm10.chr13 C 0 C 0 s canFam3.chr34 11963932 47 + 42124431 GTCTGCA-CGAGGACGG--AAGCACCA-GGCGGGGGATGACTGTGGACAGA-- i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 382488 1060 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=19081.000000 s hg38.chr3_KI270934v1_alt 133461 4 + 163458 CA---CT s panPan2.chrUn_NW_014024201v1 186200 4 - 190779 CA---CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26393 4 + 880730 CA---CT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858446 4 - 180051392 CA---CC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327368 4 + 181584905 CA---CC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 82862 4 + 100774 CA---CC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 42527 4 - 218577 CA---CC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420178 4 + 91010382 CA---CC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906472 4 - 930449 CA---CC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821420 4 - 1687011 CA---CC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204174909 4 + 204313951 TA---CT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16317075 7 + 16417988 TACTGCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 105527 4 - 306014 TA---CT i cebCap1.NW_016108150v1 C 0 I 34 s otoGar3.GL873745 2136430 4 - 2165740 TG---CT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74348086 4 + 120421639 CA---CT i mm10.chr13 C 0 C 0 e aotNan1.NW_018494784v1 146021 41 - 211231 I e dasNov3.JH577625 382488 1060 - 913073 I e canFam3.chr34 11963979 0 + 42124431 C e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=2760.000000 s hg38.chr3_KI270934v1_alt 133465 1 + 163458 G s panPan2.chrUn_NW_014024201v1 186204 1 - 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26397 1 + 880730 G i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858450 1 - 180051392 A i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327372 1 + 181584905 A i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 82866 1 + 100774 A i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 42531 1 - 218577 A i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420182 1 + 91010382 A i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906476 1 - 930449 A i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821424 1 - 1687011 A i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204174913 1 + 204313951 A i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16317082 1 + 16417988 A i saiBol1.JH378155 C 0 C 0 s mm10.chr13 74348090 1 + 120421639 G i mm10.chr13 C 0 I 1179 e aotNan1.NW_018494784v1 146021 41 - 211231 I e dasNov3.JH577625 382488 1060 - 913073 I e cebCap1.NW_016108150v1 105531 34 - 306014 I e canFam3.chr34 11963979 0 + 42124431 C e otoGar3.GL873745 2136434 0 - 2165740 C e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=124567.000000 s hg38.chr3_KI270934v1_alt 133466 30 + 163458 GCTC-TATCTAGCTTCTCTCCAACCACAAGC s panPan2.chrUn_NW_014024201v1 186205 30 - 190779 GCTC-TAACTAGCTTCTCTCCAACCACAAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26398 30 + 880730 GCTC-TATCTAGCTTCTCTCCAACCACAAGC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858451 26 - 180051392 GCC-----CTAGCTTTTCTCCAATCACAAGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327373 26 + 181584905 GCC-----CTAGCTTTTCTCCAATCACAAGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 82867 26 + 100774 GCC-----CTAGCTTTTCTCCAATCACAAGC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 42532 26 - 218577 GCC-----CTAGCTTTTCTCCAATCACAAGC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420183 26 + 91010382 GCC-----CTAGCTTTTCTCCAATCACAAGC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906477 26 - 930449 GCC-----CTAGCTTTTCTCCCATCACAAGC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821425 26 - 1687011 GCC-----CTTGCTTTTCTCCAATCACAAGC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204174914 26 + 204313951 GCC-----CTAGCTCTTCTCTAATAGCAAGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16317083 26 + 16417988 GCC-----CCAGCTCTTCTCCAGTCGCAAGC i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 2136434 21 - 2165740 ----------AGCTCTTTTCCAATCAGAAGT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 11963979 28 + 42124431 ---CCTATCCCGCTTGTCCCCAAACACACCC i canFam3.chr34 C 0 C 0 e mm10.chr13 74348091 1179 + 120421639 I e aotNan1.NW_018494784v1 146021 41 - 211231 I e dasNov3.JH577625 382488 1060 - 913073 I e cebCap1.NW_016108150v1 105531 34 - 306014 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=56942.000000 s hg38.chr3_KI270934v1_alt 133496 22 + 163458 TACC---------ATTGCCCCTAAAAAGTCC s panPan2.chrUn_NW_014024201v1 186235 22 - 190779 TACC---------ATTGCCCCTAAAAAGTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26428 22 + 880730 TACC---------ATTGCCCCTAAAAAGTCC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858477 22 - 180051392 TAAC---------ATTTCCCCTAAAAAGCCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327399 22 + 181584905 TAAC---------ATTTCCCCTAAAAAGCCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 82893 22 + 100774 TAAC---------ATTTCCCCTAAAAAGTCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 42558 22 - 218577 TAAC---------ATTTCCCCTAAAAAGCCC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420209 22 + 91010382 TAAC---------GTTTCCCCTAAAATGCCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906503 22 - 930449 TAAC---------GTTTCCCCTAAAAAGTCC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821451 22 - 1687011 TAAC---------GTTTCCCCTAAAAAGCCC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204174940 6 + 204313951 TACC---------GT---------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16317109 6 + 16417988 GGCC---------AT---------------- i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 2136455 31 - 2165740 TACCAGTCTAGCAATTCCCCTAAAAAAGCCC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74349270 22 + 120421639 TATT---------ATCTCCTGTAAAGGGCTT i mm10.chr13 I 1179 C 0 s canFam3.chr34 11964007 12 + 42124431 ---------GTCAGTCTCTTC---------- i canFam3.chr34 C 0 C 0 e aotNan1.NW_018494784v1 146021 41 - 211231 I e dasNov3.JH577625 382488 1060 - 913073 I e cebCap1.NW_016108150v1 105531 34 - 306014 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=91404.000000 s hg38.chr3_KI270934v1_alt 133518 10 + 163458 CACTGACCAT s panPan2.chrUn_NW_014024201v1 186257 10 - 190779 CACTGACCAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26450 10 + 880730 CACTGACCAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858499 10 - 180051392 CACTGACCAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327421 10 + 181584905 CACTGACCAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 82915 10 + 100774 CACTGACCAT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 42580 10 - 218577 CACTGACCAT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420231 10 + 91010382 CAATGACCAT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906525 10 - 930449 CACTGACCAT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821473 10 - 1687011 CACTGACCAT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204174946 10 + 204313951 CACTGACCAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16317115 10 + 16417988 CACTGACCAT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 105565 10 - 306014 CACCGACCAT i cebCap1.NW_016108150v1 I 34 C 0 s aotNan1.NW_018494784v1 146062 10 - 211231 CACTGACCAC i aotNan1.NW_018494784v1 I 41 C 0 s otoGar3.GL873745 2136486 10 - 2165740 CACTGACCAA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74349292 9 + 120421639 CAATGATCA- i mm10.chr13 C 0 C 0 s canFam3.chr34 11964019 10 + 42124431 AGCTGACAGG i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 382488 1060 - 913073 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=1219586.000000 s hg38.chr3_KI270934v1_alt 133528 209 + 163458 GGGCTT--CACCT-----CCTGCTTGTGGACGCCCTCCCAGCAGCTC--CTAAGAGCCCAAGAT------GCGGC-GGGGGTCTCTGCTCAGTCAGCACCAACCACAGCAACACGCTAGAACGGTTT--ACAC-GCTTTCCGATGTTGACAGGATGGCTG-TATGACTAATC---CTC--ACATTTAATTCAAAGAGATTTTCAATAAC--TATTTCAAAAA---GGAGAAAATTG----CAC s panPan2.chrUn_NW_014024201v1 186267 207 - 190779 GGGCTT--CACCT-----CCTGCTTGTGGCCGCCCTCCTAGCGGCTC--CTAAGAGCCCAAGAT------GCGGC-GGGGGTCTCTGCTCAGTCAGCACCAACCACAGCAACACGCTAGAACGGTTT--ACAC-GCTTTCCGATGTTGACAGGATGGCTG-TATGACTAATC---CTC--ACATTTAATTC--AGAGACTTTTAATAAC--TATTTCCAAAA---GGAGAAAATTG----CAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26460 207 + 880730 GGGCTT--CACCT-----CCTGCTTGTGGACGCCCTCCCGGCAGCTC--CTAAGAGCCCAAGAT------GCGGC-GGGGGTCTCTGCTCAGTCAGCACCAACCACAGCAACACGCTAGAACGGTTT--ACAC-GCTTTCCGATGTTGACAGGATGGCTG-TATGACTAATC---CTC--ACATTTAATTC--AGAGATTTTTAAGAAC--TATTTCAAAAA---GGAGAAAATTG----CAC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858509 207 - 180051392 GGGCTT--TACTT-----CTGGCTTGTCAACGCCCTCCTAGCAGCTC--TTAAAAGCCCAAGAT------GCGGC-AGGGATCTCTGCTCAGTCAGCACCAATCACAGCAACACACTAGAAC-GTTT--ACAT-GCTTTCTGATG-TGACAGGATGGCTG-TATGACTAATC---TTC--ACATTTAATTCAACGAGGTTTTTAATAAC--TATTTCAAAAA---GGAGAAAACGG----CAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327431 207 + 181584905 GGGCTT--TACTT-----CTGGCTTGTCAACGCCCTCCTAGCAGCTC--TTAAAAGCCCAAGAT------GCGGC-AGGGATCTCTGCTCAGTCAGCACCAATCACAGCAACACACTAGAAC-GTTT--ACAT-GCTTTCTGATG-TGACAGGATGGCTG-TATGACTAATC---TTC--ACATTTAATTCAACGACGTTTTTAATAAC--TATTTCAAAAA---GGAGAAAACTG----CAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 82925 207 + 100774 GGGCTT--TACTT-----CTGGCTTGTCAACGCCCTCCAAGCAGCTC--TTAAAAGCCCAAGAT------GCGGC-AGGGATCTCTGCTCAGTCAGCACCAATCACAGCAACGCACTAGAAC-GTTT--ACAT-GCTTTCTGATG-TGACAGGATGGCTG-TATGACTAATC---TTC--ACATTTAATTCAATGAGGTTTTTAATAAC--TATTTCAAAAA---GGAGAAAACTG----CAC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 42590 210 - 218577 GGGCTT--TACTT-----CTGGCTTGTCAACGCCCTCCTAGCAGCTC--TTAAAAGCCCAAGAT------GCGGC-AGGGATCTCTGCTCAGTCAGCACCAATCACAGCAACACACTAGAAC-GTTT--ACAT-GCTTTCTGATG-TGACAGGATGGCTG-TATGACTAATC---TTC--ACATTTAATTCAACGAGGTTTTTAATAAC--TATTTCAAAAAAGGAGAGGAAATTG----CAC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420241 207 + 91010382 GGGCTT--TACTT-----CCTGCCTGTGGACGCCCTCCAAGCAGCTC--TTAAAAGCCCAAGAA------GCGGC-AGGGATCTCTGCTCAGTCAGCACCAGCCACAGCAACACACTAGAAC-GTTT--ACCT-GCTTTCTGATG-CGACAGGATGGCTG-TATGACTAATC---TTC--ACATTTAATTCAACGAGGTTTTTAATAAC--TATTTCAAAAA---GGAGAAAACTG----CAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906535 207 - 930449 GGGCTT--TACTT-----CCTGCCTGTGGACGTCCTCCAAGCAGCTC--TTAAAAGCCCAAGAT------GCGGC-AGGGATCTCTGCTCAGTCAGCACCAGCCACAGCAACACACTAGAAC-GTTT--ACAT-GCTTTCTGATG-TGACAGGATGGCTG-TATGACTAATC---TTC--ACGTTTAATTCAACGAGGTTTTTAATAAC--TATTTCAAAAA---GGAGAAAATTG----CAC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821483 210 - 1687011 GGGCTTTATACTT-----CCTGCCTGTGGACGGCCTCCAAGCAGCTC--TTAAAAGCCCAAGAT------GCGGC-AGGGGTCTCTGCTCAGTCAGCACCAACCACAGCAACACACTAGAAC-GTTT--ACAT-GCTTTCTGATGTTGACAGGACGGCAG-TATGACTAATC---TTC--ACATTTAATTCAAGGAGGTTTTTAATAAC--TATTTCAGAAA---GGAGAAAATTG----CAC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204174956 181 + 204313951 GGACTT--TACTT-----CTTGCTTGTGGACGCCCTCCTGGCAGCTC--TTAAGCGCCCAAGAT------GCGGCGGGGGGTCTCTGCTCAGTCAGCACCAACCACAGCAACACACTAAAAC-GTTT--AGAT--TTACATGATGTAGACGGGATGGGTG-CATGACTAATC---CTC--ACATTTAATTC-----------------------------AA---CCAGAAAATCG----CAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16317125 175 + 16417988 GGACTT--GACTT-----TCCGCTTGTGGATG-CCTCCTGGCAGCTC--TTAAGCGCCCAAGTT------GCGGC-GGGGGTCTCTGC----TCAGCACCAACCACAGCAACAGACTAAAAC-GTTT--ACAT--TTACATGATGCAGACGGGATAGCTG-CAAGACTAATT---CTC--ACATTAAATTC-----------------------------AA---CCAGAAAATTG----CAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 105575 179 - 306014 GGACTT--TACTT-----CCTGCTTGTGGACG-CCTCCTGGCAGCTC--TTAAGCGCCCAACTT------GCAGC-GGGGGTCTCTGCTCAGTCAGCACCAACCACAGCAACACACTAAAAC-GTTT--ACAT--TTGCATGATGCAGACGGGGTGGCTG-CATGACCAATT---CTC--ACATTTAATTC-----------------------------AA---CCAGAAAATTG----CAC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 146072 178 - 211231 GGGCTT--CACGT-----GCTGCTTCCGGACGCGCTCCTGGCAGCTC--TTCAGCGCCCAAGAT------GCGGC-GGGGGGCTCTGCTCAGTCAGCAGCAACCACAGCCACACACC-GAAC-GTTC--ACAT--TTACATGATGCAGACGGGACGGC-G-CACGACTAATC---CTC--ATATTTAATTC-----------------------------AA---CCAGAAAATCG----CAC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2136496 189 - 2165740 GGACTT---AATT-----CCTGCTAGTGGACTCCCTCCTAGCAGCAC--TTAGGACTGTCAGACT-AGGGGTGGG-GTGGTTGACTGCTCAGTCAACGCCAAT--------------------G-----------CTTTCTGGTATTGATGGGATGCCTGTTACGACTAAGA---CTC--ACATTTAACTC---AAAATTGTTAACATCTGTATTTCAGAAA---GGAGAAAACTGCAGTCAC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74349301 197 + 120421639 GGACTT----------------------AAAACCCTTCTTGCAGAGC--CCAAGGGATAGAGGT-----GGAAGT-AGGAGTTTGTGG-CAGCAAATACAAATCACAGAAATTATCAAG----GTTTGAAAAT-GCCTTCTGGCCTTGCAAGAATAGCTG-C-CAACTAACC---CTTGAACATTTCATTGAACATGCATTTTAATATC--TATTTCAGAAA---ATAGACAACTGCAGCCAT i mm10.chr13 C 0 C 0 s canFam3.chr34 11964029 184 + 42124431 TAGGAG--CACCTGCAAGTCTGCTTAGGGAC--------AGCTGACC--GCGATGACCCCA---------CCGAC-CGCGGACTCTGCACC-----CTCCAGCCACAGCAACTCGTGAAAGC-CTGT--AAACTGTCCTCCGGCGCTGGCGGGATGGCTG--------ACCC---TCC--TCACGTGAACTGGTAAGACCTC---------TATTTCAGGAC---GGACAGAACTG----CAC i canFam3.chr34 C 0 I 431 s dasNov3.JH577625 383548 207 - 913073 GAACTT--AGCTT-----AGTGCTCATGGAC----TCCTAGGAGCTCATCTCACAACTCAGGCTTGGGGAGAGAG-GATGGTCTTTGCACAGGGGGTACCAACCACAGCATCTCATCCGAGC-ATTT--AAAGCACTTCCTGCTGTTGACTGGATGGCTA-CCTCAGTCATCCTTCTC--ACATTTAACAT-----GTGCTTTAATACCCAAATTTCAAAAA---AGAGGCAT---------- i dasNov3.JH577625 I 1060 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=630758.000000 s hg38.chr3_KI270934v1_alt 133737 72 + 163458 AATCACAGGCATAATTC-AAATCAATATTGCTGAATGCCTTGGTTCCTCTATTGAGATTTTTACTCTGCAATT s panPan2.chrUn_NW_014024201v1 186474 70 - 190779 AATCACAGGCATAACTC-AAATCAATATTGCTGAATGCCTTGGTTC--CTATTGAGATTTTTACTCTGCAATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26667 70 + 880730 AATCACAGGCATAACTC-AAATCAATATTGCTGAATGCCTTGGTTC--CTATTGAGATTTCTACTCTGCAATT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858716 70 - 180051392 ATTTATAGACATAATTC-AAATCAATATTGCTGAATGCCTTGGTTC--CTACTGACATTTTTACTCTGCAATT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327638 70 + 181584905 ATTTATAGACATAATTC-AAATCAATATTGCTGAATGCCTTGGTTC--CTATTGACATTTTTACTCTGCAATT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 83132 70 + 100774 AATTACAGACATAATTC-AAATCAATATTGCTGAATGCCTTGGTTC--CTACTGACATTTTTACTCTGCAATT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 42800 68 - 218577 AATTACAG--GTAATTCAAAATCAATATTGCTGAATGCCTTGGTTC--CTACTGACA-CTTTACTCTGCAATT i cerAty1.NW_012004452v1 C 0 I 258 s chlSab2.chr4 1420448 70 + 91010382 AATTACAGGCATAATTT-AAATCAATATTGCTGAATGCCTTGGTTC--CTATTGACGTTTTTACTCTGCAATT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906742 70 - 930449 AATTACAGGCATAATTC-AAATCAATATTGCTGAATGCCCTGGTTC--CTATTGACATTTTTACTCTGCAATT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821693 70 - 1687011 AATTACAGGCATAATTC-AAATCAATATTGCTGAATGCCTTGGTTC--CCATTGAGAATTTTACTTTGCAATT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204175137 70 + 204313951 AATTACAGGCATATTTC-AAATCAATATTCCTGAATGCCTTGGTTC--CTACTGACATTTTTACTCTGCAATT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16317300 70 + 16417988 AATTACAGGCATAATTC-AAATCAATATTCCTGAATGCCTTCGTTC--CTACTGAGATTTTTACTCTGCAATT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 105754 70 - 306014 AATTACAGGCATAATTC-AAATCAATATTCCTGAATGCCTTCGTTC--CTACTGAGATTTTTACTCTGCAATT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 146250 70 - 211231 AATTACAGGCATAAGTC-AAATCAATATTCCCGAATGCCTTGGTTC--CTACTGAGATTTTTACTCTGCAATT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2136685 70 - 2165740 AATTACACGGATAATTC-AAATGTGTATTGTAGGACACTCCGGTTC--CTACTGGAACTTTTACTTTGTAATT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74349498 60 + 120421639 AATTTGATGCACAATGC-AAGTCGATACTGTTCAATGTCTTAGGGC--C----------TTTACTTTGTAATT i mm10.chr13 C 0 C 0 s dasNov3.JH577625 383755 69 - 913073 -ACTATTGGCATAATTC-AAGCCAATATTGTTGAATGCCTTGGTTC--CTATTGGGACTTCAGCTTTCTAATT i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 11964213 431 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=1117586.000000 s hg38.chr3_KI270934v1_alt 133809 137 + 163458 TAAAATTACTTTGTAATTAA-GAGGTGGGTGGCTAAGTTCATTTAAAAGAACCAAACAACTAAACCTATCCAATTTCGCTTGATTAAATGAAATCCTAGAAGGCCGATTCTGAAGATGCAATC-GTAGAGGGCACATTC s panPan2.chrUn_NW_014024201v1 186544 138 - 190779 TAAAATTACTATGTAATTAAGGAGGTGGGTGGGTAAGTTCATTTAAAAGAACCAAACAACTAAACCTATCCAATTTCGCTTGATTAAATAAAATCCTAGAAGGCCGATTCTGAAGATGCAATC-GTAGAGGGCACATTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26737 138 + 880730 TAAAATTACTTTGTAATTAAGGAGGTGGCTGGGTAAGTTCATTTAAAAGAACCAAACAACTAAACCTATCCAATTTCGCTTGATTAAATAAAATCCTAGAAGGCCGATTCTGAAGATGCAATC-GTAGAGGGCACATTC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858786 138 - 180051392 TAAAATTACTTCGTAATTAAGGAGGTGGGTGGGTAAGTTCATTCAAAAGAACCAAGCAACGAAACCTATCCAATTCAGCTTGATGAACTAAAACCCTAGAAGGCCGATTCTGAAGATGCAATC-GTGGAGGGCACATTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327708 138 + 181584905 TAAAATTACTTCGTAATTAAGGAGGTGGGTGGGTAAGTTCATTCAAAAGAACCAAGCAACGAAACCTATCCAATTCAGCTTGATGAACTAAAACCCTAGAAGGCCGATTCTGAAGATGCAATC-GTGGAGGGCACATTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 83202 138 + 100774 TAAAATTACTTCGTAATTAAGGAGGTGGGTGGGTAAGTTCATTCAAAAGAACCAAGCAACGAAACCTATCCAATTCAGCTTGATGAACTAAAACCCTAGAAGGCCGATTCTGAAGATGCAATC-GTGGAGGGCACATTC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 43126 137 - 218577 taaaaTTACTTCGTAATTAAGGAGGTGGGTGGGTAAGTTCATTCAAAAGAACCAAGCAACGAAACCTAT-CAATTCAGCTTGATGAACTAAAACCCTAGAAGGCCGATTCTGAAGATGCAATC-GTGGAGGGCACATTC i cerAty1.NW_012004452v1 I 258 C 0 s chlSab2.chr4 1420518 138 + 91010382 TAAAATTACTTCGTAATTAAGGAGGTGGGTGGGTAAGTTCATTCAAAAGAACCAAGCAACGAAACCTATCCAGTTCAGCTTGATGAACTAAAACCCTAGAAGGCCGATTCTGAAGATGCAATC-GTGGAGGGCACATTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906812 138 - 930449 TAAAATTACTTCGTAATTAAGGTGGTGGGTGGGTAAGTTCATTCAAAAGAACCAAGCAACGAAACCTATCCAATTCAGCTTGATGAACTAAAACCCTAGAAGGCCAATTCTGAAGATGCAATC-GTGGAGGGCACATTC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821763 138 - 1687011 TAAAATTACTTCGTAATTAAGGAGGTGGGTGGGTAAGTTCATTCAAAAGAACCAAGCAACGAAACCTATCCAATTCAGCTTGATTAACGAAAACCCTAGAAGGCCGATTCTGAAGATGCAATC-GTAGAGGGCACATTC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204175207 134 + 204313951 TAAAATTACTTTGTAATT----AAGTGGGTGGGTAAGTTCATTTCAAAGAACCAAATAACTAAACCTATCAAATTTACCTTGATTAAATAAAACCCTAGAAGGCCGATTCTGAAGAGGCAATA-GCAGAGGGCACATTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16317370 138 + 16417988 TAAAATTACTTTGTAATTAAGGAAGTAGGTGGGTAAGTTCATTTCAAAGAACCAAATAACTAAACCTATCAAATTTAGCTTGATTAAATAAAACCCTAGAAGGCCGATTCTGAAGATGCAAGC-GAAGAGGGCACATTC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 105824 138 - 306014 TAAAATTACTTCGTAATTAAGGAAGTGGGTGGGTAAGTTCATTTCAAAGAACCAAATAACTAAACCAATCAAATTTAGCTTGATTAAATAAAACCCTAGAAGGCCGATTCTGAAGATGCAATC-GTAGAGGGCACATTC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 146320 138 - 211231 TAAAATTACTTTGTAATTAAGGAAGTGGGCGGGTAAGTTCATTCCAAAGAACCAAGTAACTAAACCGATCAAATTTAGCTTGAGTAAATAAAACCCTCGCGGGCCGATTCTGAAGACGCGATC-GCCGAGGGCACATTC i aotNan1.NW_018494784v1 C 0 I 381 s otoGar3.GL873745 2136755 104 - 2165740 ----AT---------ACTAAGTGGCTGGGTGCGTGAGTTCATTTAAAA--------TAATTAAGCCTTTCAAATTTAGCATGAGTAAATAAACTCCTAAAAGGTCCATTCTGAAGATGTCACC-TT------------- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74349558 119 + 120421639 --AAATT--------GTTAAGTAGGTAGGTGAGACAG--AACTTTAAAGAACCC--------AACCTGTCAAATTTAGTTTACGTTAATAAAACCCTAGGAGTGTGACGAATAACAGGTGACCGGCAAAGAGTGCACTG i mm10.chr13 C 0 C 0 s dasNov3.JH577625 383824 114 - 913073 ---AATTAC--------TAAGTAGGTGGGTG-GCAATTTTATTT-----AACCAAATAACAAAACCT------TTCAATTTAGTTGCTTAAAATCCTAAAAG-TTAATTTTGAAGATATAATT-GTAAAGAATACATTC i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 11964213 431 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=915932.000000 s hg38.chr3_KI270934v1_alt 133946 166 + 163458 AGAC--ACTC-AGAGAGCAAGGG--------CTCAGGGAAGTATAACCCTGACCATCATCCTGGACTAAGCCGAGCCC----GG----------------------CCCT-CGAGGTACT--CAGCGCACAGGCAAGCACAGGTCCTGGAGTCCTCGCT-------------CGGTCAGTGCCCTG-AGCTCTCCGTCTGATTTTTAAAAACTGGCACAG s panPan2.chrUn_NW_014024201v1 186682 168 - 190779 AGACAAACTC-AGAGAGCAAGGG--------CTCAGGGAAGTATAACCCTGACCATCATCCTGGACTAAGCCCAGCCC----GG----------------------CCCT-CGAGGTACT--CAGCGCACAGGCAAGCACAGGTCCTGGAGTCCTCGCT-------------CGGTCAGTGCCCTG-AGCTCTCCGTCTGATTTTTAAAAACTGGCACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 26875 162 + 880730 AGAC-------AGAGAGCAAGGG--------CTCAGGGAAGTATAACCCTGACCATCATCCTGGACTAAGCCGAGCCC----GG----------------------CCCT-CGAGGTACT--CCGCGCACAGGCAAGCACAGCTCCTGGAGTCCTCGCT-------------CGGTCAGTGCCCTG-AGCTCTCCGTCTGATTTTTTAAAACTGGCACAG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179858924 167 - 180051392 AGACAAACTC-AGAGAGCGAGGG--------CTCAGGGAAGCATAACCCTGACCGTCATCCTGGACTAAGCCGAGCCC----GG----------------------CCCT-CGAGGCACT--CAGCGCACAGGCAAGCACCGGTCCC-GCGTCCTCGCC-------------CGGTCAGTGCGCTG-AGCTCTCCGTCTGATTTTTAAAAACTGGCACAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1327846 167 + 181584905 AGACAAACTC-AGAGAGCGAGGG--------CTCAGGGAAGCATAACCCTGACCGTCATCCTGGACTAAGCCGAGCCC----GG----------------------CCCT-CGAGGCACT--CAGCGCACAGGCAAGCACCGGTCCC-GCGTCCTCGCC-------------CGGTCAGTGCGCTG-AGCTCTCCGTCTGATTTTTAAAAACTGGCACAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 83340 167 + 100774 AGACAAACTC-AGAGAGCGAGGG--------CTCAGGGAAGTATAACCCTGACCGTCATCCTGGACTAAGCCGAGCCC----GG----------------------CCCT-CGAGGCACT--CAGCGCACAGGCAAGCACCGGTCCC-GTGTCCTCGCC-------------CGGTCAGTGCGCTG-AGCTCTCCGTCTGATTTTTAAAAACTGGCACAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 43263 164 - 218577 AGACAAACTC-AGAGAGCGAGGG--------CTCAGGGAAGTACAACCCTGACCGTCATCCTGGACGAAGCGGAGCCC----GG-----------------------CCT-CGAGGCACT--CAGCGCACAGGC-AGCACCGGTCCC-GCGTCCTCG-C-------------CGGTCAGTGCGCTG-AGCTCTCCGTCTGATTTTTAAAAACCGGCACAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420656 168 + 91010382 AGACAAACTC-AGAGAGTGAGGG--------CTCAGGGAAGTATAACCCTGACCGTCATCCTGGACTAAGCCGAGCCC----GG----------------------CCCCGCGAGGCACT--CAGCGCACAGGCAAGCACCGGTCCC-GCGTCCTCGCC-------------CGGTCAGTGCGCTG-AGCTCTCCCTCTGATTTTTAAAAACGGGCACAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 906950 167 - 930449 AGACAAACTC-AGAGAGCGAGGG--------CTCAGGGAAGTACAACCCTGACCGTCATCCTGGACTAAGCCGAGCCC----GG----------------------CCCT-CGAGGCACT--CAGCGCACAGGCAAGCACCGGTCCC-GCGTCCTCGCC-------------CGGTCGGTGGGCTG-AGCTCTCCGTCTCATTTTTAAAAACCGGCACAG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 821901 166 - 1687011 AGACAAACTC-AGAGAGCAAGG----------TCAGGGAAGTATAACCCTGACCATCATCCTGGACTAAGCCGAGCCC----GG----------------------CCCT-CCAGGCACT--CAGCGCACAGGCAAGCACAGGTCTCAGCGTCCTCGCC-------------CGGTCAGTGCGCTG-AGCTCTCCGTCTGATTTTTAAAAACTGGTACAG i colAng1.NW_012116910v1 C 0 I 11332 s calJac3.chr2 204175341 164 + 204313951 AGACAAACTC-AGACAGCAAGGG--------ATCAGGGAAGTATAACCCTGCCCTTCATCCTGGACTAGTCCGAGCCC----GG----------------------CCCT-CGAGGCACTCACAACGCACGGGAAGGCACGGGTCCTGGCGTCCTGGCC-------------CGGTCAGTGCGCGG-AGCTCTCGGTCTGATTTTTAAAAACTG------ i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16317508 158 + 16417988 GGACAAACT-------GCAAGGG--------CTCAGGGAAGGATGGCCCTGCCCGTCATCCTGGACTGGGCCGAGCCC----GG----------------------CCCT-CCAGGCACTCACAACGCACAGGAAGGCGCGGGTCCTGGCGTCCTGGCC-------------CGGTCAGTGCGCGG-AGCTCTCGGTCTGACTTTAGAAAACTG------ i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 105962 164 - 306014 AGACAAACTC-AGACAGCAAGGG--------CTCCGGGAAGTATAACCCTGCCCATCATCCTGGACCGAGCCGAGCCC----GG----------------------CCCC-CGCGGCACTCACAACGCACGGGAAGGCACGGGTCCTGGCGTCCCGGCC-------------CGGTCAGTGCGCGG-AGGTCTCCGTCTGATTTTTAAAAACTG------ i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2136859 173 - 2165740 ----ACACTCTAAACAATAAGAG--------CTCAGCAAAGCACAACCCCGACCACTACCCTCCACTGATGCGAGTTC----TGCCCAGGGAGGCCCGTC--CGTCCCCT-CTCGGACCC--CATCCCTCCG--AAACAAAGGTCTTGGCCACTCTGCC-------------CGGCCAGTGTCCTA-AATTCTCCACCTGATTTTTAAAA---------- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74349677 161 + 120421639 AGACAAGATC-TGACAATCTGGGAGGCCAACATCAGACCCCTGCAACCCTGA--GTCACTGTGTACCTCTTCAAATGCAAAAAG----------------------AAGT-CGCAAGACT--GGATGAACA---------CGGTGCA-GAAGTCTCACC-------------TG----GTATCTTC-AAATATCTCTTTGATATTTAAAAACAGTAG--- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 383938 170 - 913073 AGACCTAATC--------AAGTA--------CCAAGTCAAGTA---------CCATCATTCTCCACTAGCCCGAGGGA----GGTACCAGGAGGAACATCTTCATCTCCT-CGTGG------ACACGTACAGAAAATCAAACTTCTCCGTGTCCTCCCCAAACGTGATTTTGCAACCAGTATGCAGAAATTTTCGGTCTTTTTTTT-------------- i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 146458 381 - 211231 I e canFam3.chr34 11964213 431 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=10751.000000 s hg38.chr3_KI270934v1_alt 134112 31 + 163458 CTGCTTTTAAACACCGGCACATT-TTTGTGGC-- s panPan2.chrUn_NW_014024201v1 186850 32 - 190779 CTGCTTTTAAACACCGGCACATTGTTGGTGGC-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 27037 32 + 880730 CTGCTTTTAAACACCGGCACATTTTTGGTGGC-- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179859091 32 - 180051392 CTGCTTGTAAACACCGACACATTTTCAGTGGC-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1328013 32 + 181584905 CTGCTTGTAAACACCGACACATTTTCAGTGGC-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 83507 32 + 100774 CTGCTTGTAAACACCGACACATTTTCAGTGGC-- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 43427 31 - 218577 CTGCTTTT-AACACTGGCACATTTTCAGTGGC-- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420824 32 + 91010382 CTGCTTTTAAACACTGGCACATTTTCAGTGGC-- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 907117 32 - 930449 CTGCTTTTAAACACTGATACATTTTCAGTGGC-- i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 204175505 3 + 204313951 -----------CGC-------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16317666 3 + 16417988 -----------CGC-------------------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 106126 3 - 306014 -----------CGC-------------------- i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2137032 7 - 2165740 ------------------------TTTGTGC--- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74349838 2 + 120421639 ---CT----------------------------- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 384108 15 - 913073 -------------------TTTTTCTAATCGTGC i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 146458 381 - 211231 I e canFam3.chr34 11964213 431 + 42124431 I e colAng1.NW_012116910v1 822067 11332 - 1687011 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro5.chr3 2597276 1461 - 202621043 I a score=346247.000000 s hg38.chr3_KI270934v1_alt 134143 63 + 163458 ACAAGGGCCACC-AAACGG--GACC----CAAAGTACAGGTCCTTAACTTCCAAGATCCCG-----AAG----TGGACA----- s panTro5.chr3 2598737 66 - 202621043 ACAATGGCCACC-AAACAG--GACC----CAAAGT-CAGGTCCTTAACTCCAACGGTCCCG-----AAGAGGGTGGACA----- i panTro5.chr3 I 1461 C 0 s panPan2.chrUn_NW_014024201v1 186882 63 - 190779 ACAAGGGCCACC-AAACAG--GACC----CAAAGTACAGGTCCTTAACTTCCAAGGTCCCG-----AAG----TGGACA----- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 27069 63 + 880730 ACAAGGGCCACC-AAACAG--GACC----CAAAGTACAGGTCCTTAACTTCCAAGGTCCCC-----AAG----TGGACA----- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179859123 63 - 180051392 ACAAGGGCCACC-AAACAC--GACC----CAAAGTTGACACCCTTAACTTACAAGGTCGCG-----AAG----TGGACA----- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1328045 63 + 181584905 ACAAGGGCCACC-AAACAC--GACC----CAAAGTTGACACCCTTAACTTACAAGGTCGCG-----AAG----TGGACA----- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 83539 63 + 100774 ACAAGGGCCACC-AAACAC--GACC----CAAAGTAGAGACCCTTAACTTACAAGGTCGCG-----AAG----TGGACA----- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 43458 62 - 218577 AC-AGGGCCACCAAAACAC--GACC----CAAAGTTGACACCCTTAACTTACAA-GTCGCG-----AAG----TGGACA----- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1420856 63 + 91010382 ACAAGGGCCACC-AAACAC--GACC----CAAACTTGACACCCTTAACTTACAAGGTCGCG-----AAG----TGGACA----- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 907149 63 - 930449 ACAAGGGCCACC-AAACAC--GACC----CAAAGTTGACACCCTTAACTTACAAGGTCGCG-----AAG----TGGACA----- i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 204175508 67 + 204313951 ACAAGGGCCACC-AAACAC--CACCCCCGCAAAGCAGAGGCCCTTCACTTACAAGGTCTCC-----ATG----TGGACA----- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16317669 64 + 16417988 ACAAGGGCCGCC-AAACAC--CACCTC--CAAAGCAGAGGCCCTTCGCTGACAAGGTCTGG-----ATG----T-GACA----- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 106129 65 - 306014 ACAAGGGCCGCC-AAACAC--CGCCGC--CAAAGCAGAGGCCCTTCACTTACAAGGGCTCG-----ACG----TGGACA----- i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2137039 65 - 2165740 AAAAGGGCCATC-ACACACAAAACC----CAAAATAAAAGGCTTCAACTTGCATGGTCTTG-----GTA----TGGACA----- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74349840 54 + 120421639 ---AAGGCCACT-ACACAA--AACC---------TGTAAGCTCATCACTTATAA-GTCTTA-----GTG----TCGACA----- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 384123 71 - 913073 ACACACGCCAGC---ATAA--AACC----CAAAATAGAGGCCCTTAAGCTGTAAGGTCTCAGTGGTACG----TGAATACTATA i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 146458 381 - 211231 I e canFam3.chr34 11964213 431 + 42124431 I e colAng1.NW_012116910v1 822067 11332 - 1687011 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=374504.000000 s hg38.chr3_KI270934v1_alt 134206 70 + 163458 TGCACAGATTTGCGC-TCTCTGGAAAG----------------------------------------------GGGAACTGCAAGCCCAAG-C-TC-G-GGCGCGCCGC--GCTT--CCCACCGG s panTro5.chr3 2598803 71 - 202621043 TGCACAGATT-GCGC-CTTCTAGAAAG----------------------------------------------GGGAAC-GCAAGCCCAAG-CCTC-G-GGCGCGCCCCCCGCTT--CCCACCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 186945 70 - 190779 TGCACAGATTTGCGC-TTTCTGGAAAG----------------------------------------------GGGAACTGCAAGCCCAAG-C-TC-G-GGCGCGCCGC--GCTT--CCCACCGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 27132 71 + 880730 TGCACAGATTTGCGC-TTTCTGGAAAG----------------------------------------------GGGAAATGCAAGCCCAAG-C-TCGG-GGCGCGCCGC--GCTT--CCCACCGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179859186 71 - 180051392 CGCACAGATTTGCGCTTTTCTGGAAAG----------------------------------------------CGGAACTGCAAGCCCAAG-C-TC-G-GGCGCGCAGC--TCTT--CCCACCGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1328108 71 + 181584905 CGCACAGATTTGCGCTTTTCTGGAAAG----------------------------------------------CGGAACTGCAAGCCTAAG-C-TC-G-GGCGCGCAGC--TCTT--CCCACCGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 83602 71 + 100774 CGCACAGATTTGCGCTTTTCTGGAAAG----------------------------------------------CGGAACTGCAAGCCCAAG-C-TC-G-GGCGCGCAGC--AATT--CCCACCGG i macNem1.NW_012013899v1 C 0 T 69845 s cerAty1.NW_012004452v1 43520 71 - 218577 CGCACAGATTTGCGCTTTTCTGGAAAG----------------------------------------------CGGAACTGCAAGCCTAAGCC-TT-G-GGCGCGCAGC--AATT---CCACCGA i cerAty1.NW_012004452v1 C 0 I 1 s chlSab2.chr4 1420919 71 + 91010382 CGCACAGATTTGCGCTTTTCTGGAAAG----------------------------------------------CGGAACTGCAAGCCTAAG-C-TC-G-GGCGCGCAGC--GCTT--CCCACCGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 907212 70 - 930449 CGCACAGATTTGCGC-TTTCTGGAAAG----------------------------------------------CGGAACTGCAAGCCCAAG-C-TC-G-GGCGCGCAGC--GCTT--CCCACCGG i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 204175575 70 + 204313951 TGCACAGATTTGCGC-TTTCTGGAAAG----------------------------------------------GGGAACTGCAGGCCCAAG-C-TC-T-GGCGCGCCGC--GCTT--CCCGCCCG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16317733 70 + 16417988 CGCACAGATCTGCGC-TTTCTGGGAAG----------------------------------------------GGGAACTGCAGGCCCAAG-C-TC-C-GGCGCGCGGC--GCTT--CCCGCCCG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 106194 70 - 306014 TGCACAGATTTGCGC-TTTCGGGGAAG----------------------------------------------GGGAACCGCAGGCCCAGG-C-CC-C-GGCGCGCGGC--GCTT--CCCGCCCG i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2137104 39 - 2165740 CGCGTAGATTTGCGC-CTTCTCG---------------------------------------------------------------CAAAG-C-TC---------------GCAT--CCCAC--- i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 384194 119 - 913073 TACACAGATTTGTCC-TTTCTCGAAAGACTGCTCCGTTTTCCCAACAGCTGTAATGACACAGAACACATGGAAGAGACTCGCGAACCCAGG-C-CG-GAGGCTTGATGT--GCTCACCCCACCGT i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74349894 0 + 120421639 C e aotNan1.NW_018494784v1 146458 381 - 211231 I e canFam3.chr34 11964213 431 + 42124431 I e colAng1.NW_012116910v1 822067 11332 - 1687011 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=47590.000000 s hg38.chr3_KI270934v1_alt 134276 18 + 163458 ACACCCA-CCCGGCCGAGC s panTro5.chr3 2598874 17 - 202621043 ACACCCA-CCCGGCCGA-C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 187015 18 - 190779 ACACCCA-CCCGGCCGAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 27203 18 + 880730 ACACCCA-CCCGGCCGAGC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179859257 17 - 180051392 CCGCCCA--CTGGCCGAGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1328179 17 + 181584905 CCGCCCA--CTGGCCGAGC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 43592 18 - 218577 GCGCCAA-CCCGGTCGAGC i cerAty1.NW_012004452v1 I 1 C 0 s chlSab2.chr4 1420990 18 + 91010382 ACGCCCA-CGCGGCCTAGC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 907282 18 - 930449 ACGCCCA-CCCGGTCGAGC i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 204175645 19 + 204313951 ACGCCCGGCCGGGTGGAGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16317803 19 + 16417988 ACGCCCGGCCCGGCGGAGC i saiBol1.JH378155 C 0 M 907 s cebCap1.NW_016108150v1 106264 19 - 306014 ACGCCCGGCCCGGTCGAGC i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2137143 1 - 2165740 ------------------C i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 384313 17 - 913073 --GCCCGGAAAGGACAGGC i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74349894 0 + 120421639 C e aotNan1.NW_018494784v1 146458 381 - 211231 I e macNem1.NW_012013899v1 83673 69845 + 100774 T e canFam3.chr34 11964213 431 + 42124431 I e colAng1.NW_012116910v1 822067 11332 - 1687011 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=53137.000000 s hg38.chr3_KI270934v1_alt 134294 20 + 163458 CCGGCCACT----------CCT-CGCACCCA s panTro5.chr3 2598891 21 - 202621043 CCGCCCACT----------CCTTCGCACCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 187033 20 - 190779 CCGGCCACT----------CCT-CGCACCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 27221 20 + 880730 CCGGCCACT----------CCT-CGCACCCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179859274 20 - 180051392 CCGGCCACT----------CCT-CGCACCCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1328196 20 + 181584905 CCGGCCACT----------CCT-CGCACCCA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 43610 20 - 218577 CCGCCCACT----------CCT-CGCCACCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1421008 20 + 91010382 CCGGCCACT----------CCT-CGCACCCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 907300 20 - 930449 CCGGCCACT----------CCT-CGCACCCA i manLeu1.NW_012107609v1 C 0 C 0 s otoGar3.GL873745 2137144 12 - 2165740 CCGGGTAGT----------CTT--------- i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 384330 23 - 913073 CCGGCGACCGGCAGGCGAACCT-C------- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74349894 0 + 120421639 C e aotNan1.NW_018494784v1 146458 381 - 211231 I e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16317822 907 + 16417988 M e calJac3.chr2 204175664 0 + 204313951 C e cebCap1.NW_016108150v1 106283 0 - 306014 C e canFam3.chr34 11964213 431 + 42124431 I e colAng1.NW_012116910v1 822067 11332 - 1687011 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=149826.000000 s hg38.chr3_KI270934v1_alt 134314 80 + 163458 -CCCAGG----CGGTTTCACC-CGCC---CC-GCCGGCCC-CACCCACGGGCTGCGGGCGGCCCCGCAGGACAACCCTCA--------CAGAGGGCGGC------- s panTro5.chr3 2598912 79 - 202621043 -CCCGGG---GCCGTTTCACCTCGCC---CCCGCCAGCCC--ACCCACGGGCTGCGGGCGGCCCT-CAGGACAACC-TCA--------CACGAGGCG-C------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 187053 80 - 190779 -CCCGGG----CGGTTTCACC-CGCC---CC-GCCAGCCC-CACCCACGGGCTGCGGGCGGCCCCTCAGGACAACCCTCA--------CAGAGGGCGGC------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 27241 81 + 880730 -CCCGGG----CGGTTTCACC-CGCC---CC-GCCAGCCCTCACCCACGGGCTGCGGGCGGCCCCTCAGGACAACCCTCA--------CAGAGGGCGGC------- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179859294 80 - 180051392 -CCCGGG----CGGTTTCACC-CGCC---CC-GCCCGCCA-CACCCACGGGCTGCGGGCGGCCCCTCGGGACAACCCGCA--------CAGAGGGCGGC------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1328216 80 + 181584905 -CCCGGG----CGGTTTCACC-CGCC---CC-GCCCGCCA-CACCCACGGGCTGCGGGCGGCCCCTCGGGACAACCCGCA--------CAGAGGGCGGC------- i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 43630 77 - 218577 -CCCGGG----CGGTTTCACC-CGTC---CC-GCCCGCC--CACCCAC-GGCTGCGGGCGGCCCTCGGAGACAA-CCGCA--------CAGAGGACGCC------- i cerAty1.NW_012004452v1 C 0 I 12 s chlSab2.chr4 1421028 80 + 91010382 -TCCGGG----TGGTTTCACC-CGCC---CC-GCCCGCCC-CACCCACGGGCTGCGGGCAGCCCCTCGGGACAACCCGCA--------CAGAGGGCGGC------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 907320 80 - 930449 -CCCGGG----CGGTTTCACC-CGCC---CC-GCCCGCCC-CACCCACTGGCTGCGGGCGGCCCCTCGGGACAACCTGCA--------CAGAGGGCGGC------- i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 204175664 63 + 204313951 ---CCGG----CCACTGCACC-CGCC---CC-GTCCGCCC-CACCTGCGGGAC---------------AGACAACCAGCA--------CAACAGGCGGC------- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 106283 59 - 306014 ---CCGG----CCCCCGCACC-GACG---CC-GGCGGCCC-CACCCGCGG-------------------GACAACCCGCA--------CAACCGGCGGC------- i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2137156 65 - 2165740 ---AGGG----CCCTGCCGCC-C-CG---CG-GCGAGCCC-CGACCAC--GCCACGGCCAGCCC----GCACAGCCCTT--------------GGCGGC------- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74349894 49 + 120421639 ---------------------------------CCCAGAC-TACCAACGGATTACTCGCAGACCC--------GTCCGCATC------CAGAATGCA--------- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 384353 103 - 913073 CCCCGAGGCTGCAGGTTAACC-GGATTAGCC-GCGAGAAA-CTGCCGAGCGCCGCGCCTCCGCTCGCGGGCCCGCCTCCGCCTGAGGTCTAAGGGCGGTTTTGGGT i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 146458 381 - 211231 I e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16317822 907 + 16417988 M e canFam3.chr34 11964213 431 + 42124431 I e colAng1.NW_012116910v1 822067 11332 - 1687011 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=80069.000000 s hg38.chr3_KI270934v1_alt 134394 21 + 163458 AGAGGCCCGGCCCAGCCAGGA- s panTro5.chr3 2598991 21 - 202621043 AGAGGCCCGGCCCAGCCAGGA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 187133 21 - 190779 AGAGGCCCGGCCCAGCCAGGA- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 27322 21 + 880730 AGAGGCCCGGCCCAGCCAGGA- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179859374 21 - 180051392 AGAGGCCCAGCCCAGCCAGGA- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1328296 21 + 181584905 AGAGGCCCAGCCCAGCCAGGA- i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1421108 21 + 91010382 AGAGGCCCAGCCCAGCCAGGA- i chlSab2.chr4 C 0 I 20 s manLeu1.NW_012107609v1 907400 21 - 930449 AGAGGCCCAGCCCAGCCAGGA- i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 204175727 21 + 204313951 AGAGGCCCGGCCCAGTCAGGG- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 106342 21 - 306014 AGAGGCCCGGCGCAGCCAGGG- i cebCap1.NW_016108150v1 C 0 C 0 s mm10.chr13 74349943 13 + 120421639 ACAGGCCGGTCCC--------- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 384456 22 - 913073 GGTGGCCTGGACGCCACAAGGC i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 146458 381 - 211231 I e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16317822 907 + 16417988 M e canFam3.chr34 11964213 431 + 42124431 I e otoGar3.GL873745 2137221 0 - 2165740 C e colAng1.NW_012116910v1 822067 11332 - 1687011 I e cerAty1.NW_012004452v1 43707 12 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=5500.000000 s hg38.chr3_KI270934v1_alt 134415 1 + 163458 C s panTro5.chr3 2599012 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 187154 1 - 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 27343 1 + 880730 C i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179859395 1 - 180051392 C i rheMac8.chr6 C 0 I 15 s macFas5.chr6 1328317 1 + 181584905 C i macFas5.chr6 C 0 I 15 s manLeu1.NW_012107609v1 907421 1 - 930449 C i manLeu1.NW_012107609v1 C 0 I 15 s calJac3.chr2 204175748 1 + 204313951 C i calJac3.chr2 C 0 I 15 s cebCap1.NW_016108150v1 106363 1 - 306014 C i cebCap1.NW_016108150v1 C 0 I 15 s otoGar3.GL873745 2137221 1 - 2165740 C i otoGar3.GL873745 C 0 I 1 s dasNov3.JH577625 384478 1 - 913073 C i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74349956 0 + 120421639 C e aotNan1.NW_018494784v1 146458 381 - 211231 I e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16317822 907 + 16417988 M e canFam3.chr34 11964213 431 + 42124431 I e colAng1.NW_012116910v1 822067 11332 - 1687011 I e chlSab2.chr4 1421129 20 + 91010382 I e cerAty1.NW_012004452v1 43707 12 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=9175.000000 s hg38.chr3_KI270934v1_alt 134416 5 + 163458 TCCAC s panTro5.chr3 2599013 5 - 202621043 TCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 187155 5 - 190779 TCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 27344 5 + 880730 TCCAC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179859411 5 - 180051392 TCCGC i rheMac8.chr6 I 15 C 0 s macFas5.chr6 1328333 5 + 181584905 TCCGC i macFas5.chr6 I 15 C 0 s cerAty1.NW_012004452v1 43719 5 - 218577 TCCGC i cerAty1.NW_012004452v1 I 12 C 0 s manLeu1.NW_012107609v1 907437 5 - 930449 TCCGC i manLeu1.NW_012107609v1 I 15 C 0 s calJac3.chr2 204175764 5 + 204313951 TACGC i calJac3.chr2 I 15 C 0 s cebCap1.NW_016108150v1 106379 5 - 306014 TCCGC i cebCap1.NW_016108150v1 I 15 C 0 s otoGar3.GL873745 2137223 4 - 2165740 CCCG- i otoGar3.GL873745 I 1 C 0 s mm10.chr13 74349956 1 + 120421639 T---- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 384479 5 - 913073 GCTAC i dasNov3.JH577625 C 0 I 3 e aotNan1.NW_018494784v1 146458 381 - 211231 I e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16317822 907 + 16417988 M e canFam3.chr34 11964213 431 + 42124431 I e colAng1.NW_012116910v1 822067 11332 - 1687011 I e chlSab2.chr4 1421129 20 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=126961.000000 s hg38.chr3_KI270934v1_alt 134421 27 + 163458 -CCCGGTGACCTT-GGGCAGAC-ACGACTC s panTro5.chr3 2599018 27 - 202621043 -CC-GGTGACCTTTGGGCAGAC-ACGACTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 187160 27 - 190779 -CCCGGTGACCTC-GGGCAGAC-ACGACTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 27349 27 + 880730 -CCCGGTGACCCT-GGGCAGAC-ACGACTC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179859416 27 - 180051392 -CCGAGTGACCTT-GGGCAGAC-ACGACTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1328338 27 + 181584905 -CCGAGTGACCTT-GGGCAGAC-ACGACTC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 43724 29 - 218577 -CCGAGTGACCTTGGGGCAGACAACGACTC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1421149 27 + 91010382 -CCGGGTGACCTT-GGGCAGAG-ACGACTC i chlSab2.chr4 I 20 C 0 s manLeu1.NW_012107609v1 907442 27 - 930449 -CCGGGTGACCTT-GGGCAGAG-ACGACTC i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 204175769 27 + 204313951 -CCGGTTGACCTT-GGGCAAAC-ACCACTC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 106384 27 - 306014 -CCGGGTCACCTT-GGGCAGAC-ACCACTC i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2137227 26 - 2165740 -CCCAGTGACCTT-GGG-AGAC-AGGGCTC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74349957 21 + 120421639 -CCCTTTAACCTT-GG-------AGAACTT i mm10.chr13 C 0 C 0 s dasNov3.JH577625 384487 26 - 913073 CCCGTGTGACCTT-GGGCCA---ACGTCTC i dasNov3.JH577625 I 3 C 0 e aotNan1.NW_018494784v1 146458 381 - 211231 I e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16317822 907 + 16417988 M e canFam3.chr34 11964213 431 + 42124431 I e colAng1.NW_012116910v1 822067 11332 - 1687011 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=191511.000000 s hg38.chr3_KI270934v1_alt 134448 32 + 163458 CTCCCCGAGTCCACCCGCCAGGCA--GAGGCGAG s panTro5.chr3 2599045 32 - 202621043 CTCCCCGAGTCA--CCGCCAGGCACTGAGGCGAG i panTro5.chr3 C 0 I 2 s panPan2.chrUn_NW_014024201v1 187187 34 - 190779 CTCCCCGAGTCCACCCGCCAGGCACTGAGGCGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 27376 34 + 880730 CTCCCCGAGTCCACCCGCCAGGCACTGAGGCGAG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179859443 34 - 180051392 CTCCCCGAGTCCACCCGCCAGGCACTGAGGCGAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1328365 34 + 181584905 CTCCCCGAGTCCACCCGCCAGGCACTGAGGCGAG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 43753 33 - 218577 CTCCCCGAGTCCACCCGCCAGGCACTGAGGCGA- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1421176 34 + 91010382 CTCCCCGAGTCCACCCGCCAGGCACTGAGGCGAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 907469 34 - 930449 CTCCCCGAGTCCACCCGCCAGGCACTGAGGCGAG i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 204175796 34 + 204313951 CTCCCCGAGTCCACGAGCCAGGCACTGAGGCGGG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 106411 34 - 306014 CTCCCCGAGTCCACGCGCCAGGCACGGAGGCGGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 146839 34 - 211231 CTCCCCGAGTCCACGCGCCAGGCACTGAGGCGGG i aotNan1.NW_018494784v1 I 381 C 0 s otoGar3.GL873745 2137253 31 - 2165740 TTCCCCTTGGCCACGCACTAAG-ACTAAG--GAG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74349978 17 + 120421639 ---------------CGCTAG--ACCAAGACGGG i mm10.chr13 C 0 C 0 s dasNov3.JH577625 384513 31 - 913073 --CCCCTAGGGCGC-CACCCGGAACCGAGCCTGG i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16317822 907 + 16417988 M e canFam3.chr34 11964213 431 + 42124431 I e colAng1.NW_012116910v1 822067 11332 - 1687011 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=583956.000000 s hg38.chr3_KI270934v1_alt 134480 141 + 163458 G-GGCTACCTCAGCCCGCGAG-GTCGCCGGACCCCAGGCCCG-GA--CC-AAAGCGG-CGGAGGGGACGCCC------AGCAAG--CCCGCGGGGTCGCGACCTT-CACCGGGACGCGGCC----TACCTGCTAAGGACC-GAGCTCCCCAGGCCCCCG-AGT s panTro5.chr3 2599079 143 - 202621043 G-AGCTACCTCAGCCCGCGAG-GTCGCCGGACCCCAGGCCCGCGA--CCCAAAGCGGGCGGAGGGGACGCC-------AGCAAG--CC-GCGGG-TCGCGACCTTTCACCGCGACGCGGCC---CTACCTGCTAAGGAC--GAGCTCCCCAGGCCCCCGTAGT i panTro5.chr3 I 2 C 0 s panPan2.chrUn_NW_014024201v1 187221 141 - 190779 G-AACTACCTCAGCCCGCGAG-GTCGCCGGACCCCAGGCCCG-GA--CC-AAAGCGG-CGGAGGGGACGCCC------AGCAAG--CCCGCGGGGTCGCGACCTT-CACCGGGACGCGGCC----TACCTGCTAAGGACC-GAGCTCCCCAGGCCCCCG-AGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 27410 140 + 880730 G-GGCTACCTCAGCCCGCGAG-GTCGCCGGACCCCAGGCCGG-GA--CC-AAAGCGG-CGGAGGGGACGCCC------AGCAAG--CCCGCGGGGTCGTGACCTT-CA-CGGGACGCGGAC----TACCTGCTTAGGACC-GAGCTCCCCAGGCCCCCG-AGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179859477 140 - 180051392 G-CGCCACCTCAGCCCGCGGG-GTTCCCGGA-CCCAGGCCCG-GA--CC-AAGGCAG-CAGAGCGGACGACC------AGAAAG--CCCGCGGGGTCGTGACCTT-CACCGGGACGCGGAC----TACCTGCTAAGGACC-GAGCTCCCCGGTTCCCCG-AGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1328399 140 + 181584905 G-GGCCACCTCAGCCCGCGGG-GTTCCCGGA-CCCAGGCCCG-GA--CC-AAGGCGG-CAGAGCGGACAACC------AGCAAG--CCCGCGGGGTCGTGACCTT-CACCGGGACGCGGAC----TACCTGCTAAGGACC-GAGCTCCCCGGTTCCCCG-AGT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 43786 137 - 218577 ---GCCACCTCAGCCCGCGGGTGGTTCCGGA-CCCAGGGCCG-GA--CC-AAGGCGG-CAGAGGGAGGCACT------AGCAG----CCGCAGGGTCGTGACCTT-CACCGGGACGCGGAC----TACCTGCTAAGGACCTGAGCTGCCCGGTT-CCCG-AGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1421210 140 + 91010382 G-AGCCACCTCAGCCCGCGGG-GTCCCCGGA-CCCAGGCCCG-GA--CC-AAGGCGG-CAGAGGCGACGACC------AGCAAG--CCCGCGGGGTCGTGACCTT-CACCGGGACGCGGAC----TACCTGCTAAGGACC-GAGCTCCCCGGTCCCCCG-AGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 907503 140 - 930449 G-GGCCACCTCAGCCCGCGGG-GTTCCCGGA-CCCAGGCCCG-GA--CC-AAGGCGG-CAGAGGGGACGACT------AGCAAG--CCCGCAGGGTCGTGACCTT-CACCGGGACGCGGAC----TACCTGCTAAGGACC-GAGCTCCCCGGTTCCCCG-AGT i manLeu1.NW_012107609v1 C 0 M 1390 s calJac3.chr2 204175830 147 + 204313951 GTGGCTACCTCAGCCCGCGGG-GTCCCCGGACCCCAGGCCCG-GA--CC-AGTGCGG-CGGAGGGGACCCCCGGGCCGAGCA-G--CCCGTGGGGTCGTGACCTT-CACCGGGAGGCGGAC----GACTTGCTAAGGACT-GAccccccccggcccccg-ggt i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 106445 142 - 306014 G-GGCTACCTCAGCCCGCGGG-GTCCCCGGGCCCCAGGCCCG-GA--CC-AGTGC-G-CGGAAGGGACCCCCGGGCCGAGCA-G--CCCGTGGGGTCGTGACCTT-CACCGGGATGCGCAC----GACCTGCTAAGGAAT-GA---CCCCCGGACCCCG-GGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 146873 145 - 211231 GGCGCTACCTCAGCCCGCGGG-GTCCCCGGA-CCCAGGCCCG-GA--CC-AGGGCGG-CGGAGGGGACCGCCGGGCCGAGCC-G--CCCGTGGGGTCGTGACCTT-CACCGGGACGCGGAC----GACCTGCTAAGGACT-GA-GCCCCCGGGCCCCCG-GGT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2137284 88 - 2165740 G-GGGCGACTCAGCCCGCGAG-GCCTCCGGACGCCAAGCCTG-GACTCC-AAAGCGG---------------------AG------------AGGTCGTGACCTT-CACCCGGGCGCAGCG----GGCCG--------------------------------- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74349995 62 + 120421639 G-----------------AAG-G---CCAGACTCCACGCCCGCGA--CC----------------------------------------TCGGGGTCGTGACCTT-CGCCGGAAAGCAGTC----GGCTT--------------------------------- i mm10.chr13 C 0 C 0 s canFam3.chr34 11964644 143 + 42124431 G-AGCGACCGTAGCCCGCGAG-GCCCCCGGCCCCCAGGCCTG-GA-TCC-CAGGCAG-CGGAAGCGTCCCCG------GGGCGG--CACGCGGGGTCATGACCTT-CACAGGGACGCAGACCCGCGGGCTCCTGGAAACT-G---CCCGCTGCCCTGCG-GGT i canFam3.chr34 I 431 I 6 s dasNov3.JH577625 384544 116 - 913073 G-GGCGACCTTGGCGCGCGGG-CCCTCCCGGCTCCAGGCCTA-GA--CC-----TCG-CGGGGG--------------AGCGGGGTCCCGCTGGGCGGTGACCTT-CACCGGG-----GTC-------------AGCACC-GGGCTCCGGCAGCCTCCG-GT- i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16317822 907 + 16417988 M e colAng1.NW_012116910v1 822067 11332 - 1687011 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=858765.000000 s hg38.chr3_KI270934v1_alt 134621 193 + 163458 ACACTCCGCGG----CTCCCCCTCGCACCGGCCCAGGGCTCTCCCAGCCCCTTCCCGATCCCCGG----GCAGGGGGCGCGGGCA--------CCCGGCG-CCCGC-TCCGCTCGGACCCGC-TGGGGAccgtcccgctcctaccgccgcctcgccccccgcc--tgccctgcccCGGTCCGCGGCAGGGACTCACCGCCTT-GGCCAGCGCCAG s panTro5.chr3 2599222 189 - 202621043 ACACTCCGCG-----CTCCCCCGC-CACCCGCCCAGG-CTCTCCCAGCCCCTTCCCGATCCCCGG----GCAGGGGGCGCGGGGA--------CCCGGCG-CCCGC-TCCGCTCGGACCCGC-TGGGGACCGTCCCGCTCCTACCGCCGCCTCGCCCCCCGCC--TGCCCTGCCCCAGTCCGCGGCAGGGACTCACCGCCTT-GGCCAGCGCCA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 187362 186 - 190779 ACACTCCGCGG----CTCCCCCTCGCACCGGCCCAGGGCTCTCCCAGCCCCTTCCCGATCCCCGG----GCAGGGGGCGCGGGGA--------cccggcg-cccgc-tccgctcggacccgcttggggaccgtcccgctcctaccgccgcctcgccccccgcc--tgccctgccccAGTCCGCGGCAGGGACTCACCGCCTT-GGCC-------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 27550 193 + 880730 ACACTCCGCGG----CTCCCCCTCGCACCGGCCCAGGGCTCTCCCAGCCCCTTCCCGATCCCCGG----GCAAGGGGCGCGGGGA--------CCCGGCGCCCCGC-TCCGCTCGGACCCGC-TGGGGACCGTCCCGCTCCTACCGCCGCCTCGCCCCCCGCC--TTCCCTG-gccgctccgcggcagggactcaccgcctt-ggccagcgccag i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179859617 201 - 180051392 CCGCCCCGCGG----CTCCGCCTCGCACCGGCCCAGGGCTCTCCCAGCCCCTTCCCGATCCCCGG----ACCGGGGGCGCGGGGGCGCGGGGACCCGGCG-CCCGC-TCCGCTCGCACCCGC-TGGGGACCGTCCCGCTCCTACCGCCGCCTCGGCCCCCGCC--TGTCCCGCCCCGGTCCGCGGTACGGACTGACCGCCTT-GGCCAGCGCCAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1328539 201 + 181584905 CCGCCCCGCGG----CTCCGCCTCGCACCGGCCCAGGGCTCTCCCAGCCCCTTCCCGATccccgg----accgggggcgcgggggcgcggggacccggcg-cccgC-TCCGCTCGCACCCGC-TGGGGACCGTCCCGCTCCTACCGCCGCCTCGGCCCCCGCC--TGTCCCGCCCCGGTCCGCGGTACGGACTGACCGCCTT-GGCCAGCGCCAG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 43923 193 - 218577 CCGGCCTTCGG----CTCCGCCTCGCACCGGCC--AGGCTCTCCCAGCCCCTTCCCGAT-CCCGG----ACCCGGGGCGCGGGGAC-------CCCGGCG-CCCGC-TCCGCTCGCACCCGC-TGGGGACCTGCCCGCTCTCTACGCCGCC-CGGCCCCCGCCGTTGCCCCGCCCCGGTCCGCGGTACGGACTGACCGCCTTGGGCCAGCGCCAG i cerAty1.NW_012004452v1 C 0 I 458 s chlSab2.chr4 1421350 201 + 91010382 CCGCCCCGCGG----CTCCCCCTCGCACCGGCCCAGGGCTCTCCCAGCCCCTTCCCGATcccggg----accgggggcgcggggccgcggggacccggcg-cccgc-tccgctcgcatccgc-tggggaccgtcccgctcctaccgccgcctcggccccctcc--tgtcccgccccggtccgcGGTACGGACTGACCGCCTT-Ggccagcgccag i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204175977 193 + 204313951 ccgccccgcTG----CTCCCCCTCGCACCGGCCCAGGGCTCTCTCAGCCCCTTCCGGATCCCCGG----GCAGGGGGTGCGGGGA--------CCCGGCG-CTCGA-TCCGCTCGGACCCGC-TGTGGACCGACCCGCTCCTACTGCTGCCTCGGCCCCTGCC--TGCCCCGCCCCGGTCCGCGGCACGGACTCACTGCCTT-GGCCAGCGCCAG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 106587 193 - 306014 CCGCCCCGCTG----CTCCCCCTCGCACCGGCCCAGGGCTCTCTCAGCCCTTTCCGGATCCCCGG----GCAGGGGGCGCGGGGA--------CCCGGCG-CTCGA-TCCGCTCGGACCCGC-TGGGGACCCGCCCGCTCCTACTGCTGCCCCGGCCCCCGCC--TGCCCCTCCCCGGTCCGCGGCACGGACTCACTGCCTT-GGCCAGCGCCAG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 147018 193 - 211231 CCGCCCCGCTG----CTCCGCCTCGCACCGGCCCAGGGCTCTCTCAGCCCCTCCCGGATCCCCGG----GCAGGGGGCGCGGGGA--------CCCGGCG-CTCGA-TCCGCTCGGACCCGC-TGGGGACCGGCCCGCTCCTACTGCTGCCTCGGCCCCCGCC--TGCCCCGCCCCGGTCCGCGGCACGGACTCACGGCCTT-GGCCAGCGCCAG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2137372 110 - 2165740 --------------------------ACCAGC-------------------------------------------------AGGC--------TTTGGTG---------CGCCTACACCCGG-TAGGGATTGTCCCGCTCCCTCCGCCGCCTCGGCCCCCGCC-----------CCACCTCGCGGCGTCAACTCACCTTCCT-GGTCAGGGCCAG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74350057 105 + 120421639 ----------------------------CGGCCCA---------CTGCACCTTCCCAGACTCAGG----CCAACTCGGGTGGAAT--------CGTGGCG---------CACTC-------C-TAG---------------------------------CGCC--TG-------CCATTTCGTGGCACTAACTCACCGCCCC-AGTTAACGCCA- i mm10.chr13 C 0 C 0 s canFam3.chr34 11964793 180 + 42124431 --ACCCTCCGGCGACCTCCTCCCCGCACCCGCCCG---------CAGACCCTCCCCAggccggggccctgcgggcggggcgggg---------cggggcA-CTCGCGTCCGCTCGGGCCCGC--GGAGACCGTCCTGCGC------CCCCCTCGATCCCCGCA-----CCCTGCCCGCTCCGCGGCGAAGACTCACTGCTCT-GGTCAGCGCCAG i canFam3.chr34 I 6 C 0 s dasNov3.JH577625 384660 168 - 913073 CAACCCCGCGGG---CTCCGCTCCGCGTC--CCCAGACCCTTCGCCGCCGCGTCCCGA-----------CCCGGGGACGGGGGGG--------CACGGGG-ACCGA----GCTCTGTTCCAC-AAGGGACTGT-----------GGCCGCCTCGGCCCCCGCA--TGTCCA--CCCGCCCCGCGGCGCCG-CTCACCGCTCT-GGTCAGCGCCAG i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16317822 907 + 16417988 M e colAng1.NW_012116910v1 822067 11332 - 1687011 I e manLeu1.NW_012107609v1 907643 1390 - 930449 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=487721.000000 s hg38.chr3_KI270934v1_alt 134814 111 + 163458 CGCCAAGCGCCGAGCGCTTGGCAACCGCGACAGGCCCCGGACCCCCGACACGTCTGTAGTCGCCGCCGCGCAGTC--------CCGCCAGTCCCTGCG-CAGACTGCGCCTGCGCACCAC s panTro5.chr3 2599411 106 - 202621043 -----AGCGCCGAGCGCTTGGCAACCGCGACAGGCCCCGTACCCCTGACATGTCTGTAGTCGCCTCCGCGCAGTC--------CCGCCAGTCCCTGCG-CAGACTGCGCCTGCGCACCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 187548 106 - 190779 -----AGCGCCGAGCGCTTAGCAGCCGCGACAGGCCCCGGACCCCCGACATGTCTCTAGTCGCTTCCGCGCAGTC--------CCGCCAGTCCCTGCG-CAGACTGCGCCTGCGCACAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 27743 108 + 880730 cgcc-agcgccgagcacttagcacccgcgacaggccCCGGACCCCCGACATGTCTGTAGTCGCACCCGCGCAGTC--------CCGCCAGTCCCTGCG-CAGACT-CGCCTGCGC-CCAC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179859818 105 - 180051392 ------GCGCCGAGTGCTCAGCAGCCGCGACAGTCTCCGGACCCCCGACATGACTGTTGACGCCGCCACGCAGTC--------CCGCCAGTCCCTGCG-CAGACTGCGCCTGCGCACCAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1328740 105 + 181584905 ------GCGCCGAGTGCTCAGCAGCCGCGACAGTCTCCGGACCCCCGACATGACTGTTGACGCCGCCACGCAGCC--------CCGCCAGTCCCTGCG-CAGACTGCGCCTGCGCACCAC i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1421551 105 + 91010382 ------gcgccgagtgctcagcagccgcgacagcCTCCTGACCCCCGACATGACTGTTGACGCCGCCACGCAGTC--------CCGCCAGTCCCTGCG-CAGACTACGCCTGCGCACCAC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204176170 102 + 204313951 ------GCGCTGGGCGCTCAGCAGCCGTGACAGCCTCCGGACCCCCGACATGTC---AGTTGCAGCCGTACTGTC--------CCGCCAGTCACCGCG-CAGACTGCGCCTGCGCACCAC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 106780 102 - 306014 ------GCGCCGGGCGCTCAGCAGCCGCGACAGCCTCCGGACCCCCGACATGTC---AGTCGTCGCCGCGCTGTC--------CCGCCAGTCCCCGCG-CAGACTGCGCCTGCGCACCAC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 147211 102 - 211231 ------GCGCCGGGCGCTCAGCAGCCGCGACAGCCTCCGGACCCCCGACATGTC---AGTCGTAGCCGCGCTGTC--------CTGCCAGTCCCCGCG-CAGACTGCGCCTGCGCACCAC i aotNan1.NW_018494784v1 C 0 I 159 s otoGar3.GL873745 2137482 110 - 2165740 ------GTGCCGCCCCCGCAGCAGCCACAACATGCCTAGGGCCCCGGACAAGTC---TGTCACCACCTCACAGTCCACCAGCACCCCCAAACTCCCAC-CGTGTTGCGCCTGCGCACCAC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74350162 93 + 120421639 -----AGCGCCGCCCGCGAAGAAGCCTCGAAACTGCGCCAACCCCGGCCATGTC--------------TGCCTTC--------CCGCAAGCCCCAGCGACAGACTGCGCTTGCGCACCGA i mm10.chr13 C 0 C 0 s canFam3.chr34 11964973 103 + 42124431 ------GCGCCGGGCGCCCAGCAGCCGAGACACCGCCCGGACCCCCGACATGTCTGT--CCTCCACCGCGCTGTC--------CCACCAACCCCCGCGCCACACTGCGCCTGCGCATCT- i canFam3.chr34 C 0 I 1 s dasNov3.JH577625 384828 103 - 913073 ------GAGCCGGGCACGCAACAGCCGCGACACCACTCGGGCCCCCGACATGTCTGC--CCGCTACAGCGTAAGC--------TGGCCAGCCTCCGCGCCCCACGGCGCCTGCGCACCA- i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16317822 907 + 16417988 M e colAng1.NW_012116910v1 822067 11332 - 1687011 I e manLeu1.NW_012107609v1 907643 1390 - 930449 M e cerAty1.NW_012004452v1 44116 458 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=-41423.000000 s hg38.chr3_KI270934v1_alt 134925 25 + 163458 GGCCGGGTCA---------------------------------------------------------------AGGCGGGG-----------------------------------CGCTAGT s panTro5.chr3 2599517 29 - 202621043 GCCCGGGTCA---------------------------------------------------------------AGGGGGGG-------------------------------GGGGCGCTAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 187654 23 - 190779 GCCCGGGTCA---------------------------------------------------------------AGGGGG-------------------------------------CGCTAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 27851 24 + 880730 GCCCGGGTCA---------------------------------------------------------------AGGGCGG------------------------------------CGGTAGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179859923 64 - 180051392 GCCGGGGTCGCGCT-----------------------------------------------------------AGGGGGATATCGCGCCTGCGCACCACGCCGGGGTCGAGCGGGGCGGTAGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1328845 64 + 181584905 GCCGGGGTCGCGCT-----------------------------------------------------------AGGGGGATATCGCGCCTGCGCACCACGCCGGGGTCGAGCGGGGCGGTAGT i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1421656 64 + 91010382 GCCGGGGTCGCGCT-----------------------------------------------------------AGGGGGATATCGCGCCTGCGCACCACGCCGGGGTCGAGCGGGGCGGTAGT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204176272 64 + 204313951 ACCGGGGTCGCGCT-----------------------------------------------------------GGGGGGATACCGCGCCTGCGTACTACGCCGGGGTCCAGCTGGGCGGCCGC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 106882 123 - 306014 ACCCGGGTCGAGCGGGGGGGAGGATGTGGGGGGGATACCGCGCCTGCGCACCACACGGGGGTCGAGCGGGGTAGGGGGGATACCGCGCCTGCGCACTACGCCGGGGTCGAGCGGGGCGGCAGC i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 2137592 11 - 2165740 ----------------------------------------------------------------------------------------------------------------GACGCGAGAGC i otoGar3.GL873745 C 0 I 1 s mm10.chr13 74350255 20 + 120421639 ----------------------------------------------------------------------------------------------GTCGCGCGGGTGTCGGGCTT--------- i mm10.chr13 C 0 C 0 s canFam3.chr34 11965077 21 + 42124431 GTCGCGCCCAGCCT-----------------------------------------------------------AGGACGC------------------------------------------- i canFam3.chr34 I 1 C 0 s dasNov3.JH577625 384931 25 - 913073 GGCCCAGCCGC--------------------------------------------------------------GGGGAGGAGACGCG------------------------------------ i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 147313 159 - 211231 I e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16317822 907 + 16417988 M e colAng1.NW_012116910v1 822067 11332 - 1687011 I e manLeu1.NW_012107609v1 907643 1390 - 930449 M e cerAty1.NW_012004452v1 44116 458 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=148787.000000 s hg38.chr3_KI270934v1_alt 134950 24 + 163458 GGGGGACATCGCGCCTGCGCACCA s panTro5.chr3 2599546 24 - 202621043 GGGGAACATCGCGCCTGCGCACCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 187677 24 - 190779 GGCGGACATCGCGCCTGCGCACCA i panPan2.chrUn_NW_014024201v1 C 0 M 563 s gorGor5.CYUI01015759v1 27875 24 + 880730 GGGGGACATTGCGCCTGCGCACCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179859987 24 - 180051392 GGGGGACATCGCGCCTGCGCACTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1328909 24 + 181584905 GGGGGACATCGCGCCTGCGCACTA i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1421720 24 + 91010382 GGGGGACATCGCGCCTGCGCACTA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204176336 24 + 204313951 GGGGGACGTCGCGCCTGCGCACCA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 107005 24 - 306014 GGGGGACGTCGCGCCTGCGCACCA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 147472 24 - 211231 GGGGGACGTCGCGCCTGCGCACCA i aotNan1.NW_018494784v1 I 159 C 0 s otoGar3.GL873745 2137604 22 - 2165740 GAAGGATATTGCGCCTGCGCAT-- i otoGar3.GL873745 I 1 C 0 s mm10.chr13 74350275 24 + 120421639 GGAAGATTCTGCGCCTGCGCAACA i mm10.chr13 C 0 C 0 s canFam3.chr34 11965098 23 + 42124431 -GGGGACACCGCGCCTGCGCACCA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 384956 23 - 913073 GGAGGGGGCCGCGCCTGCGTATA- i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16317822 907 + 16417988 M e colAng1.NW_012116910v1 822067 11332 - 1687011 I e manLeu1.NW_012107609v1 907643 1390 - 930449 M e cerAty1.NW_012004452v1 44116 458 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=85761.000000 s hg38.chr3_KI270934v1_alt 134974 40 + 163458 CGACACGCCC-GGGC--AGGGGTCTAATGGGCGGGGACGCCGC s panTro5.chr3 2599570 40 - 202621043 CGACACGCCC-GGGC--CGGGGTCTAAGGGGCGGGGACGCCGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 27899 39 + 880730 CGCCACGCCC-GGGC--C-GGGTCTAAAGGCCGGGGACGCCGC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179860011 36 - 180051392 CGTCACGCCC-GGGC--GGGGGCT----GAGTGGGGGCGCCGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1328933 36 + 181584905 CGTCACGCCC-GGGC--GGGGGCT----GAGTGGGGGCGCCGC i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1421744 38 + 91010382 CGTCACGCCC-GGGCGGGGGGGCT----GAGTGGGGGCGCCGC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204176360 37 + 204313951 CGCCACACCCTGGGC--GGGGGCT----GAGTGGGGGCGCCGC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 107029 37 - 306014 CGCCACGCCCTGGGC--GGGGGCT----GAGTGGGGGCGCCGC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 147496 37 - 211231 CGCCCCGCCCTGGAC--GGGGGCT----GAGTGGGGGCGCCGC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2137626 33 - 2165740 ---CACGCGG-GGGG--TGGGGTT----GCGTCGGGGTTCCGC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74350299 31 + 120421639 CGCCCCTCCT-GGCT--CGCG--T----GAGTGGTGGTGC--- i mm10.chr13 C 0 C 0 s canFam3.chr34 11965121 28 + 42124431 CGCCGCGACC----C--CG---------CGGTGGGGGCATCGC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 384979 40 - 913073 GGACGCTCCC-GGGA--CGTGGGCGTGGTAGCGAGGGCACTGC i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16317822 907 + 16417988 M e colAng1.NW_012116910v1 822067 11332 - 1687011 I e manLeu1.NW_012107609v1 907643 1390 - 930449 M e cerAty1.NW_012004452v1 44116 458 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chrUn_NW_014024201v1 187701 563 - 190779 M a score=70847.000000 s hg38.chr3_KI270934v1_alt 135014 13 + 163458 GCCTGCGCAAAGC s panTro5.chr3 2599610 13 - 202621043 GCCTGCGCAAAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 188266 13 - 190779 GCCTGCGCAAAGC i panPan2.chrUn_NW_014024201v1 M 563 C 0 s gorGor5.CYUI01015759v1 27938 13 + 880730 GCCTGCGCAAAGC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179860047 13 - 180051392 GCCTGCGCAAAGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1328969 13 + 181584905 GCCTGCGCAAAGC i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1421782 13 + 91010382 GCCTGCGCAAAGC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204176397 13 + 204313951 GCCTGCGCAAAGC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 107066 13 - 306014 GCCTGCGCAAAGC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 147533 13 - 211231 GCCTGCGCAAAGC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2137659 13 - 2165740 GCCTGCGTAGAGA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74350330 8 + 120421639 GCCTGCGC----- i mm10.chr13 C 0 C 0 s canFam3.chr34 11965149 11 + 42124431 GCCTGCGCACA-- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 385019 11 - 913073 GCCTGAGTACC-- i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16317822 907 + 16417988 M e colAng1.NW_012116910v1 822067 11332 - 1687011 I e manLeu1.NW_012107609v1 907643 1390 - 930449 M e cerAty1.NW_012004452v1 44116 458 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=683355.000000 s hg38.chr3_KI270934v1_alt 135027 195 + 163458 -GGACCCGCGGACGGTGGCGCT-GG--GTGGCCACGGAGGTCCCGCGCTCCCCGA--CCGAGATAGG-------------------------G---------------CGGGCCCT--ATTTCGGGGAGATGTTGggcaccaacattttttaaagccc--cgt----------------------------------gggtggttcTCCGGGATCTCCCAGACCGAGAGGGCCTGAACGTCCAGACCTCAGGGAATGGGGTCGAAGGG-----GCGGCG--CTCGT s panTro5.chr3 2599623 195 - 202621043 -GGACCCGCGGACGGTGGCGCT-GG--GTGGACACGGAGGTCCCGCGCTCCCCGA--CCGAGATAGG-------------------------G---------------CGGGCCCT--ATTTCGGGGAGGTGTTTggcaccaacattttttaaagccc--cgt----------------------------------gggtggttcTCCGGGATCTCCCAGACCGAGAGGGCCTGAACGTCCAGACCGCAGGGAATGGGGTCGAAGGG-----GCGGCG--CTCGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 188279 195 - 190779 -GGACCCGCGGACGGTGGCGCT-GG--GTGGACACGGAGGTCCCGCGCTCCGCGA--CCGAGATAGG-------------------------G---------------CGGGCCCT--atttcggggaggtgttgggcaccaacattttttaaagccc--cgt----------------------------------gggtggttcTCCGGGATCTCCCAGACCGAGAGGGCCTGAACGTCCAGACTGCAGGGAATGGGGTCGAAGGG-----GCGGCG--CTCGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 27951 192 + 880730 -GGACCCGC-GACGGTGGCGCT-GG--GTGGACAC-GAGGTCCCGCGCTCCCCGA--CCGAGATAGG-------------------------G---------------CGGGCCCT--ATTTCGGGGAGGTGTTGGGCACCAACACTTTTTAAAGCCC--CGT----------------------------------GGGTGGTTCTCCGGGATCTCCCAGACCGAGAGGGCCTGAACGTCCAGACCGCA-GGAATGGGGTCGAAAGG-----GCGGCG--CTCGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179860060 194 - 180051392 -GGACCCGCGGACGGAGGCGTT-GA--GGGGACGCGGAGGTCCTGGGCTCCCCGA--CCGAGGTAGA-------------------------G---------------CGGGCCCT--ATTTTGGGGAGGTGTTGGGCACTAACA-TTTTTAAAGCGC--CGT----------------------------------GGGTGGTTCTGCGGGATCGCCCAGACAGAGGGGGCCTGAACGTCCAGACCGCAGGGAATGGGGTCGGAGGG-----GCTGCG--CTCGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1328982 196 + 181584905 -GGACTCGCGGACGGAGGCGTT-GAGGGGGGACGCGGAGGTCCTGGGCTCCCCGA--CCGAGGTAGA-------------------------G---------------CGGGCCCT--ATTTTGGGGAGGTGTTGGGCACTAACA-TTTTTAAAACGC--CAT----------------------------------GGGTGGTTCTGCGGGATCGCCCAGACAGAGGGCACCTGAACGTCCAGACCACAGGGAATGGGGTCGGAGGG-----GCTGCG--CTCGC i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1421795 195 + 91010382 -GCACCCGCGGACGGAGGCGTT-GC-GAGGGACGCGGGGGTCCTGGGCTTCCCGA--GCGAGGTAGA-------------------------G---------------CGGGCCCT--ATTTCGGGGAGGTGTTGGGCACTAACA-TTTTTAAAGCGC--CAT----------------------------------GGGTGGTTCTGCGGGATCGCCCAGACAGAGGGGGCCTGAACGTCCAGACCACAGGGAATGGGGTCGGAGGG-----GCTGCG--CTCGT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204176410 195 + 204313951 -GGACTTGCGGACGGTGGCGCTGGG--GGCGACACCGAGGTCCCGCTTTCTCGGA--CTGAGGTAGG-------------------------G---------------CGGGCCCT--GTTCTGGGGAGGTGTCGGGCACCAACA-TTTTTAAAGCCC--CGT----------------------------------GGATGGTTCTCCGGGATCGCCCAGATCGAGAGGGCCTGAACGTCCAGCCCTCAGGGAATGGGGTCGGAGGG-----GCGGCG--CTTGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16318729 170 + 16417988 -GGACCCGCGGACGGCGGCGCT-GG--GGCGACCCCGAGGTCCCGCTTTCTCCGA--CTGAGGTAGG-------------------------G---------------CGGGCCCT--GTTCTGGGGAGGTGTCGGGCAGCAACA--TTGTAAAGCCC--CGT----------------------------------GGGTGGTTCCCCGGGATCGTCCAGACCG-----------------------CAGGGAATGGGGTCGGAGGG-----ACGGCG--CTTGT i saiBol1.JH378155 M 907 C 0 s cebCap1.NW_016108150v1 107079 194 - 306014 -GGACCCGCGGACGGTGGCGCTGGG--GGCGACACCGAGGTCCCGCTTTCTCCGA--CTGAGGTAGG-------------------------G---------------CCGGCCGT--GTTCTGGGGAGGCGTCGGGCGCCAACA-TTTTTAAAGCCC--CGT----------------------------------GGGTGGTTCTCCGGGATCGCGCAGACCGAGAGGGCCTGAACGTCCGGACCGCAGGGAATGGGGTCGGAGGG------CGGCG--CTTGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 147546 194 - 211231 -GGACCCGCGGACGGTGGCGCCGGG--GTCGACGCCGAGGTCCCGCTTCCTCCGA--CTGAGGTAGG-------------------------G---------------CGGGCCCT--GTTCTGGGGAGG-GTCGGGCACCAGCA-TTTTTAAAGCCC--CGT----------------------------------GGGTGGTTCTCCGGGGTCGCCCAGACCGCGAGGGCCTGAACGTCCAGAGCGCCGGGAGTGGGGTCGGAGGG-----GCGGCG--CGTGT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2137672 259 - 2165740 -GAATCCGCGG-CTGAAGCGCAGAG--GAAGAGGTAGGGTTCCCGCGCTCCTGGC--CGGCCGTAGGTCAGGGTGCTCGGTGGCCCGGCCGCG---------------CAGGCCTT--GCTCAGGGTGGGGTTCGGTCATCCACAGTTCTTAAAAAAC--AATGCAAAACAAACAAAAACAGTAAAAATGAAATCCCGCGTGGCTCCCTGAAATTGCCAGGACTGAGTGGATCGGAAGCTTCAGGAGGAGGAGAAC--GGTCGGAGAGTGGTGGCCGCGGCCTCGT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 74350338 183 + 120421639 ----CCTGTAAAC-GCGGCG---GT--GGCAACAC------------------GT--CTGAGGTAGG-------------------------GTGGCAGCAACGCTGATGGGCTCT--GCTCCAGGGGTAAGTGAGGTGCCAATG-TCTTTAAAGTGCTTCTC----------------------------------GGGTGGTTCTT---GTTTGCCAAAACAGAGAGGGTCGGATGATCTGGAGAGATGGAAGTAGGGTCCT-GGG-----GCGGAG--ATCGC i mm10.chr13 C 0 I 218 s canFam3.chr34 11965160 82 + 42124431 -GGGTCCGCAGACCGTGCCGCT-GA--GGGCATCCGGAG------------------------CCGA-------------------------G---------------CGCTCCCC---------------------------------------TCC--CGG----------------------------------GGGTGAGTC--------------------GGGGGCC---------------------------------GG-----GCGGTG--TTCG- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 385030 162 - 913073 AGGCCGCGC------TGGGGCT-GA--GGGG----CGGGGCCGCGCCTGCGCAGAGCCGGCGGGAGG-------------------------A---------------CAGTATCTGGACGCTGAGGGGACGCGGCGGCCTGAGG---TTTCCAGCGC--TGA--------------------------------------GGCTCTGCCGG------------GAGAGGGCCCGGCGACCCCGGCCGGGAGGTAT---GTC-----------GGGGCG--CTCGG i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e colAng1.NW_012116910v1 822067 11332 - 1687011 I e manLeu1.NW_012107609v1 907643 1390 - 930449 M e cerAty1.NW_012004452v1 44116 458 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=9962.000000 s hg38.chr3_KI270934v1_alt 135222 3 + 163458 CCG- s panTro5.chr3 2599818 3 - 202621043 CCG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 188474 3 - 190779 CCG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 28143 3 + 880730 CCG- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179860254 3 - 180051392 CCG- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1329178 3 + 181584905 CCG- i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1421990 3 + 91010382 CCG- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204176605 3 + 204313951 CCG- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16318899 3 + 16417988 CCG- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 107273 3 - 306014 CCG- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 147740 3 - 211231 CCG- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2137931 3 - 2165740 CAC- i otoGar3.GL873745 C 0 I 1 s dasNov3.JH577625 385192 3 - 913073 -TGG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74350521 218 + 120421639 I e macNem1.NW_012013899v1 83673 69845 + 100774 T e canFam3.chr34 11965242 0 + 42124431 C e colAng1.NW_012116910v1 822067 11332 - 1687011 I e manLeu1.NW_012107609v1 907643 1390 - 930449 M e cerAty1.NW_012004452v1 44116 458 - 218577 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=119829.000000 s hg38.chr3_KI270934v1_alt 135225 22 + 163458 CGGAGGTGGGCGGGAGCGGCCC- s panTro5.chr3 2599821 22 - 202621043 CGGAGGTGGGCGGGAGCGGCCC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 188477 22 - 190779 CGGAGGTGGGCGGGAGCGGCCC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 28146 22 + 880730 CGGAGGTGGGCGGGAGCGGCCC- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179860257 22 - 180051392 CGGAGGTGGGCGGGAGCGACCC- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1329181 22 + 181584905 CGGAGGTGGGCGGGAGCGACCC- i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 44574 22 - 218577 CGGAGGTGGGCGGGAGCGACCC- i cerAty1.NW_012004452v1 I 458 C 0 s chlSab2.chr4 1421993 22 + 91010382 CGGAGGTGGGCGGGAGCGACCC- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204176608 22 + 204313951 CGGGGTTGGGCGGGAGCTGCCT- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16318902 22 + 16417988 CGGAGTCGGGCGGGAGCGGCCC- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 107276 22 - 306014 CGGAGTCGGGCGGGAGCGGCCC- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 147743 19 - 211231 CGGAGCTGGGAGGGAGCGG---- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 2137935 22 - 2165740 GCTACGCGGGCAGGAGCGACCC- i otoGar3.GL873745 I 1 N 0 s canFam3.chr34 11965242 21 + 42124431 -GTGGGGGGCCAGGGGTAGGTC- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 385195 23 - 913073 CCGGGGTCAGCTGAGTCGTGCTC i dasNov3.JH577625 C 0 C 0 e mm10.chr13 74350521 218 + 120421639 I e macNem1.NW_012013899v1 83673 69845 + 100774 T e colAng1.NW_012116910v1 822067 11332 - 1687011 I e manLeu1.NW_012107609v1 907643 1390 - 930449 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=226767.000000 s hg38.chr3_KI270934v1_alt 135247 60 + 163458 GGGGCCTCCGGCCTCTA-GAGAGCGGGAGTGACCCTCGGT--TTCTGGCCTCCGAGGGGCGGG s panTro5.chr3 2599843 60 - 202621043 GGGGCCTCCGGCCTCTA-GGGAGCGGGAGTGACCCTCGGT--TTCTGGCCCCCGAGGGGCGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 188499 61 - 190779 GGGGCCTCCGGCCTCTAGGGGAGCGGGAGTGACCCTCGGT--TTCCGGCCTCCGAGGGGCGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 28168 58 + 880730 GGGG-CTCCGGCTTCTG-GGGAGCGGGAGTGACCCTCGGT--TTCTGGCCTCCGA-GGGCGGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179860279 60 - 180051392 GGGGCCTCCGGCCTCTA-CTGAGCGGGAGTGACCCTCGGT--CTCCGGCCTCCGAGGGGCGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1329203 60 + 181584905 GGGGCCTCCGGCCTCTA-CTGAGCGGGAGTGACCCTCGGT--CTCCGGCCTCCGAGGGGCGGG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 44596 60 - 218577 GGGGCCT-CGGCCTCT--CTGAGCGGGAGTGACCCTCCGTTCTCCCGGCCTCCGAGGGGCGGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1422015 60 + 91010382 GGGGCCTCCGGCCTCTA-CTGAGCGGGAGTGACCCTCGGT--CTCCGGCCTCCGAGGGGCGGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204176630 60 + 204313951 TGGGCCTCCGGCCTCTA-GTGAGCGGGAGTGACCCTCGGC--CTCCGGCCTCGGAGGGGTGGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16318924 59 + 16417988 CGGGCCTCCGGCCTCTG-GTGAGCAGGAGGGACCCTCGGT--CTCCGGCCTCGGAGGCG-GGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 107298 60 - 306014 CGGGCCTCCGGCCTCTA-GTGAGCGGGAGTGACCCTCGGT--CTCCGGCCTCGGAGGGGTGGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 147762 28 - 211231 --------------------------------CCCTCGGT--GTCCGGCC-CGGAGGGGCGGG i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 11965263 47 + 42124431 AGGGCCTAGGG-------AAAAGTCGGGCGGACTAGGGGT-----GGGTC----AGGGGTCGG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 385218 53 - 913073 -AGGGCTGAGAT------CCGGGCATCGATGTTTTTAAAG--CTCTGTCCTCCG-GTGACGGG i dasNov3.JH577625 C 0 I 159 e mm10.chr13 74350521 218 + 120421639 I e macNem1.NW_012013899v1 83673 69845 + 100774 T e colAng1.NW_012116910v1 822067 11332 - 1687011 I e manLeu1.NW_012107609v1 907643 1390 - 930449 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=164133.000000 s hg38.chr3_KI270934v1_alt 135307 41 + 163458 AGCGATCCTC-AGCCATGTCCCTAGTGTCTGGCTTccggc-tg s panTro5.chr3 2599903 41 - 202621043 AGCGATCCTC-AGCCATGTCCCTAGCCTCTGGCTTccggc-tg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 188560 41 - 190779 AGCGGTCCTC-AGCCATGTCCCTAGCCTCTGGCTTccggc-tg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 28226 41 + 880730 AGCGATCCTC-AGCCATGTCCCTAGCCTCTGGCTTccggc-tg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179860339 41 - 180051392 AGCGATCCTC-AGCCATGTCCCTAGCTTCTGGCTTccggc-ta i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1329263 41 + 181584905 AGCGATCCTC-AGCCATGTCCCTAGCTTCTGGCTTccggc-ta i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 44656 42 - 218577 -GCGATCCTCAAGCCATGTCCCTGGCTTCTGGCTTGCGGCTTA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1422075 41 + 91010382 AGCGATCCTC-AGCCATGTCCCTAGCTTCTGGCTTccggc-ta i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204176690 41 + 204313951 AGTCACCCTC-ATTCATGTCCCCAGCCTCTGGCTTccggc-ta i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16318983 41 + 16417988 AGTCTCCCTC-ATCCATGTCCCCAGCCTCTGGCTTccggc-ta i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 107358 41 - 306014 AGCCTCCCTC-GCTCATGTCCCCAGCCCCTGGCTTccggc-ta i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 147790 41 - 211231 CGCCTCCCTC-ATTCCTGTCCCCGGCCTCTGGCTTccggc-tc i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 11965310 4 + 42124431 AGTA--------------------------------------- i canFam3.chr34 C 0 C 0 e mm10.chr13 74350521 218 + 120421639 I e dasNov3.JH577625 385271 159 - 913073 I e macNem1.NW_012013899v1 83673 69845 + 100774 T e colAng1.NW_012116910v1 822067 11332 - 1687011 I e manLeu1.NW_012107609v1 907643 1390 - 930449 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=657744.000000 s hg38.chr3_KI270934v1_alt 135348 125 + 163458 atttttaaatttttggtagaggcgggatcttgctctgttgcccaggctggtctcgaacttgtgg--cctcaagcg-atcctacctcctcggcctccccaagtgcggagatta-cagacagagccactgc s panTro5.chr3 2599944 125 - 202621043 atttttaaatttttggtagaggcgggatcttgctctgttgcccaggctggtctcgaacttgtgg--cctcaagcg-atcctccctcctcggcctccccaagtgcggggatta-cagacagagccactgc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 188601 125 - 190779 atttttaaatttttggtagaggcgggatcttgctctgttgcccaggctggtctcgaacttgtgg--cctcaagcg-atcctccctcctcggcctccccaagtgcggggatta-cagacagagccactgc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 28267 125 + 880730 attattaaattttttgtagaggcgggatcttgctctgttgcccaggctggtctcgaacttgtga--cctcaagcg-atcctccctcctcggcctccccaagtgcggggatta-cagacagagccactgc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179860380 125 - 180051392 atttttaaattttttgcagtggcgggatcttgctgtgttgcccgggctggtctcaaactcttgg--cctcaagcg-atcctccctcctcggcctccccaagtgcggggatta-ggggcggagccaccgc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1329304 125 + 181584905 atttttaaattttttgcagtggcgggatcttgctgtgttgcccgggctggtctcaaactcttgg--cctcaagcg-atcctccctcctcggcctccccaagtgcggggatta-ggggcggagccaccgc i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 44698 126 - 218577 ACTTTTAATGttttcgtagtggcgggatc-tgctgtgttg-ccgggctggtc-cgaactcttgggccgtcaagcgcatcctccgtcctcggcctccctaagtgcggggattatggggcggagccaccgc i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1422116 125 + 91010382 atttttaatttttttgtagtggcgggatcttgctgtgttgcccgggctggtctcgaactcttgg--cctcaagcg-atcctccctcctcggcctccccaagtgcggggatta-ggggcggagccaccgc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 909041 125 - 930449 atttttgaatgtttcgtagtggcgggatcttgctgtgttgcccgggctggtctcaaactcttgg--cctcaagcg-atcctccctcctcggcctccccaagtgcggggatta-ggggcggagccaccgc i manLeu1.NW_012107609v1 M 1390 C 0 s calJac3.chr2 204176731 119 + 204313951 atttttaaattttttgtagaggcgggctctcgctttgttgccc-----ggtctcgaactcttgg--cctcaagcg-atcctccctcctctgcctcctaacatgt-gggatta-cgggcggagccacagc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16319024 120 + 16417988 atttttaaatagtttggagaggcgggatcttgcttcgttgccc-----ggtcgcgaactcttgg--cctccagcg-atcctccatcctctgcctcccaaagcgcggggattg-cgggcggagccaccgc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 107399 120 - 306014 atttttaaattttttgtagaggcgggatcttgctttgttgccc-----ggtctcgaactcttgg--cctcgagcg-atcctccctcctctgcctcccagagcgcggggattg-cgggcggagccaccgc i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 147831 120 - 211231 agttttaaattttttgtagaggcgggatcttgctttgctgccc-----ggtctcgaactcctgg--cctcgagcg-gccctccctcctctgcctcccacaatgcggggatcg-cgggcggcgccaccgc i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 11965314 61 + 42124431 --------------------------------------------------------GGTCAGGG--CGCCGGGCG-GGC-----GCTCCGGTCCACCC---TGCGGGGGCCG-CGGCGGTGGACACGGG i canFam3.chr34 C 0 C 0 e mm10.chr13 74350521 218 + 120421639 I e dasNov3.JH577625 385271 159 - 913073 I e macNem1.NW_012013899v1 83673 69845 + 100774 T e colAng1.NW_012116910v1 822067 11332 - 1687011 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=67461.000000 s hg38.chr3_KI270934v1_alt 135473 13 + 163458 ------gcacggcc-GTGGT s panTro5.chr3 2600069 13 - 202621043 ------gcacggcc-GTGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 188726 13 - 190779 ------gcatggcc-GTGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 28392 13 + 880730 ------gcacggcc-GTGGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179860505 13 - 180051392 ------gcagggcc-GTGGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1329429 13 + 181584905 ------gcagggcc-GTGGT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 44824 13 - 218577 ------gcagggcc-GTGGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 1422241 13 + 91010382 ------gcagggcc-GTGGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 909166 13 - 930449 ------gcagggcc-GTGGT i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 204176850 13 + 204313951 ------gcgccgcc-TGGGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16319144 13 + 16417988 ------gcacggcc-TGGGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 107519 13 - 306014 ------gcacggcc-TGGGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 147951 13 - 211231 ------gctcggcc-CGGGT i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74350739 14 + 120421639 ------GCCCGGCCTGTTGT i mm10.chr13 I 218 C 0 s canFam3.chr34 11965375 19 + 42124431 CCGGTGACTCGGTG-AGGGT i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 385271 159 - 913073 I e macNem1.NW_012013899v1 83673 69845 + 100774 T e colAng1.NW_012116910v1 822067 11332 - 1687011 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=833027.000000 s hg38.chr3_KI270934v1_alt 135486 145 + 163458 CAGCTTTGAAAGCTGGGTAGATC---CCTTTGGCTCATACGCCTTTCTGCTAGCTTACCCTGATTCTGCTTCTGGTTCAGAT--AGTATTTTAATATTTCTAGTGT-GTCTTTTTCTAAGATATCTGAAATCTTTTTGTGGAATGAAGTGG s panTro5.chr3 2600082 145 - 202621043 CAGCTTTGAAAGCTGGGTAGATC---CCTTTGGCTTATACGCCTTTCTGCTAGCTTACCCTGATTCTGCTTCTGGTTCAGAT--AGTATTTTAATATTTCTAGTGT-GTCTTTTTGTAAGATATCTGAAATCTTTTTGTGGAATGAAGTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 188739 145 - 190779 CAGCTTTGAAAGCTGGGTAGATC---CCTTTGGCTTATACGCCTTTCTGCTAGCTTACCCTGATTCTGCTTCTGGTTCAGAT--AGTATTTTAATATTTCTAGTGT-GTCTTTTTGTAAGATATCTGAAATCTTTTTGTGGAATGAAGTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 28405 142 + 880730 CAGCTTTGAAAGCTGGGTAGATC---CCTTTGGC---TACGCCTTTCTGCTAGCTTACCCTGATTCTGCTTCTGGTTCAGAT--AGTATTTTAATATTTCTAGTGT-GTCTTTCTGTAAGATATCTGAAATCTTTTTGTGGAATGAAGTGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179860518 145 - 180051392 CAGCTTTTAAAGATGCGTAGATC---CCTTTGGCTTATACGCCTTTCTGCTAGCTTACCCTGATTTTGCTTAAGGTTCAGAG--AGTATTTTAATATTTCTAGTGT-GTCTTTTTGTAAGATATCTGAAATCTTTTTGTGGAATGAAGTGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1329442 145 + 181584905 CAGCTTTTAAAGATGCGTAGATC---CCTTTGGCTTATACGCCTTTCTGCTAGCTTACCCTGATTTTGCTTCAGGTTCAGAG--AGTATTTTAATATTTCTAGTGT-GTCTTTTTGTAAGATATCTGAAATCTTTTTGTGGAATGAAGTGG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 44837 144 - 218577 CAGCTTTTAAAGA-GCGT-GATT---CCTCTGGCTTATACGCCTTTCTGCTAGGCTTACCCGATTTTGCTTCAGGTTCAGAGACAGTATTTTAATATTTCTAGTGT-GTCTTTTTGTAAGATATCTGAAA-CTTTTTGTGGAATGAAGTGG i cerAty1.NW_012004452v1 C 0 N 0 s chlSab2.chr4 1422254 145 + 91010382 CAGCTTTTAAAGGTGCGTAGATC---CCTTTGGCTTATACGCCTTTCTGCTAGCTTACCCTGATTTTGCTTCAGGTTCAGAG--AGCATTTTAATATTTCTAGTAT-GTCTTTTTGTAAGATATCTGAAATCTTTTTGTGGAATGAAGTGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 909179 145 - 930449 CAGCTTTTAAAGATGCGTAGATC---CCTTTGGCTTATACGCCTTTCTGCTAGCTTACCCTGATTTTGCTTCAGGTTCAGAG--AGTATTTTAATATTTCTAGTGT-GTCTTTTTGTAAGATATCTGAAACCTTTTTGTGGAATGAAGTGG i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 204176863 142 + 204313951 CAGCTTTGAAAGCTGC---GATC---CCTTTGGCTTATACGACTTTCTGCCAGCTTACCCTGATTTTGCTTCTGGTTCGGAT--AGTGTTTTAATTTTTCTAGTGT-GTCGTTTTGTAAAATACCTGAGATCTTTTTGTGGAATGAAGTGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16319157 148 + 16417988 CCGCTCTGAAAGCTGCGCAGACCCCGCCTTTGGCTTCCGCGGCTTTCTGACAGCGCACCCTGATGTTGCTTCTGGTGCAGAT--AGCGTTTTAATTTTTCTAGTGT-GTCCTTTCGTAAGATACCTGAGATCTTTCTGTGGAATGAGGTGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 107532 148 - 306014 CCGCTGTGAAAGCTGCGCAGACCCCTCCTTTGGCTGGTACGACCTTCTGCCAGCCAACCCTGACTTTGCTTCGGGTTCAGAT--CGTGTTTTAATTTTTCTAGCGT-GTCGTTTTGTAAGATACCTGAGATCTTTTTGTGGAATGAAGTGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 147964 126 - 211231 CGGCTGTGAACGCTGC---GGTC---CCTTCGGCTCACGCGGCTTCCTGCC-GCTCAGCCTGATGTTGCGTCTGGT-CAG----------------TTTCTAGTGT-GTCGTTTTGTAGGACACCTGAGATCTTTTCGTGGAATGAAGGGG i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74350753 127 + 120421639 CATCC-TGAAAGCTGCTTAGATC------GTGGCTAGCATCCCATATTGCAAACGCGCTCTCATTTGA--TCACTTTCAGAT--AGTTTTTCTATTTTTCTAGTGA-GT-----------ATAGCTGAAAT-GTTCGGTGGAATTAAATAG i mm10.chr13 C 0 C 0 s canFam3.chr34 11965394 116 + 42124431 CGGC---------------GACC------GGGGCTTGTCCTCCCTGACGCGCGC-------GACCTCGCCGCTGGTCCACCG--AGCGTCT---TTCCTTTGGGGC-GTGCTTATGTAAGGTACCCG-GATTCTTTTGTGGGACTGAGTGG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 385430 135 - 913073 cagctttgaaagcggtgtggaac----ctttggcttatgggtttttttcca--------ctaatttcgc-cctgatttttac--ctttttcagcttttcctgtcgtaatatttttgtaagatatctgaaatccttt-gtggaaaaaaccgg i dasNov3.JH577625 I 159 C 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e colAng1.NW_012116910v1 822067 11332 - 1687011 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1516160.000000 s hg38.chr3_KI270934v1_alt 135631 276 + 163458 CATGAAAAATAAACCAATAATCATTAGTAA----GTA-------------TGTTTCCTGTCTTTTCACT---------TT--ATTAAAATCTTCGTCTT---------------------------------GTGCATCATG------TTTA-----ACAATT-----------TTATTTTAGTAAATTTG-------CAAG-GGTTcagtcccattttactgatatttgggttgtttcc-catttttgctctt----aataacaccatacagaacatatttgtg---accataactttctct----ttaggattatttttttaga--tgtatg---ccccagac--------------gtgacctttattggcttgcagggaatgaacatCATACCT s panTro5.chr3 2600227 276 - 202621043 CATGAAAAATAAACCAATAATCATTAGTAA----TTA-------------TGTTTCCTGTCTTTTCACT---------TT--ATTAAAATCTTCGTCTT---------------------------------GTGCATCATG------TTTA-----ACAATT-----------TTATTTTAGTAAATTTG-------CAAG-GGTTcagtcccattttattgatatttgggttgtttcc-catttttgctctt----aataacaccgtacagaacatatttgtg---accataactttctct----ttaggattttttttttaga--tgtatg---ccccagac--------------gtggcctttattggcttgcagggaatgaacatCATACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 188884 276 - 190779 CATGAAAAATAAACCAATAATCATTAGTAA----GTA-------------TGTTTCCTGTCTTTTCACT---------TT--ATTAAAATCTTCATCTT---------------------------------GTGCATCATG------TTTA-----ACAATT-----------TTATTTTAGTAAATTTG-------CAAG-GGTTcagtcccattttattgatatttgggttgtttcc-catttttgctctt----aaaaacgccgtacagaacatatttgtg---accataactttctct----ttaggattatttttttaga--tgtatg---ccccagac--------------gtggcctttattggcttgcagggaatgaacatCATACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 28547 281 + 880730 CATGAAAAATAAACCAATAATCATTAGTAA----TTA-------------TGTTTCCTGTCTTTTCACT---------TT--ATTAAAATCTTCGTCTT---------------------------------GTGCATCATG------TTTA-----ACAATT------TTGAGTTATTTTAGTAAATTTG-------CAAG-GGTTcagtcccattttattgatatttgggttgtttcc-catgtttgctctt----aataacaccgtacagaacatatttgtg---accataactttgtct----ttaggattttttttttaga--tgtatg---ccccagac--------------gtggcctttattggcttgcagggaatgaacatCATACCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179860663 290 - 180051392 CATGAAAAATAAACCAATAATCATTAGTAA----TTT-------------TGTTTCCTGTTTTTTCACTTTA----AATT--ATTAAAATCTTTCTCTT---------------------------------ATGCGAGATG------TTTA-----ACAATG------TTGAGTTATTTTAGTAAATTTG-------CAAT-GGTTcagtcccattttattgatatttgggttgtttcc-catttttactcttaataaataacaccgtacagaacatatttgtg---accgtaacttcatct----ttaggattattttcttgga--tgtatg---ccccagac--------------gtggcctttattggcttgcagggaatggacatAGTACCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1329587 290 + 181584905 CATGAAAAATAAACCAATAATCATTAGCAA----TTT-------------TGTTTCCTGTCTTTTCACTTTA----AATT--ATTAAAATCTTTCTCTT---------------------------------ATGCGAGATG------TTTA-----ACAATG------TTGAGTTATTTTAGTAAATTTG-------CAAT-GGTTcagtcccattttattgatatttgggttgtttcc-catttttactcttaataaataacaccgtacagaacatatttgtg---accgtaacttcatct----ttaggattattttcttgga--tgtatg---ccccagac--------------gtggcctttattggcttgcagggaatggacatAGTACCT i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1422399 285 + 91010382 CATGAAAAATAAACCAATAATCATTAGTAA----TTT-------------TGTTTCCTGTCTTTTCACTTTA----AATT--ATTAAAATCTTTCTCTT---------------------------------ATGCGAGATG------TTTA-----ACAAT-----------GTTATTTTAGTAAATTTG-------CAAT-GGTTcagtcccattttattgatatttgggttgtttcc-catttttactcttaataaataacaccgtacaaaacatatttgtg---accgtaacttcatct----ttaggattattttcttgga--tgtatg---ccccagac--------------gtggcctttattggcttgcagggaatggacatAGTACCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 909324 288 - 930449 CATGAAAAATAAACCAATAATCATTAGTAA----TTT-------------TGTTTCCTGTCTTTTCACTTTA----AATT--ATTAAAATC--CCTCTT---------------------------------ATGCGAGATG------TTTA-----ACAATG------TTGAGTTATTTTAGTAAATTTG-------CAAT-GGTTcagtcccattttattgatatttgggttgtttcc-catttttgctcttaataaataacaccgtacagaacatatttgtg---accgtaacttcatct----ttaggattattttcttgga--tgtatg---ccccagac--------------gtggcctttattggcttgcagggaatggacatAGTACCT i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 204177005 290 + 204313951 CATGAAAATTAAACCAATAATCATTAGTAA----TTC-------------TGTTTCCTGCCTTTTCACTTTA----AAGT--ATTAAAATCTTCCTATT---------------------------------GTACATAATG---TTTTTTA-----ACTGTT------TTGAGTTATTTTAGTAAGTTTT-------CAAT-GATTcagtcccattttgttgatatttgg---gtttcc-catttttgctgctaataaataacaccataaagaacatatctgtg---accataactttatct----ttagaattatttccttaga--tgcatg---ccccagat--------------gtggcatttattggCTTGCAGTTAATAAACATAATGCCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16319305 291 + 16417988 CATGAAAAATGAACCAATAATCATTAGTAA----TTA-------------TGTTTCCTGCCTTTTCACCTTA----AATT--ATTAAAATCTTCCTATT---------------------------------GTACATAATG--TTTTTTTA-----ACTATT------TTGAGTTATTTTAGTAAATTTG-------CAAC-GATTcagtcccattttgttgatatttgg---gtttcc-catttttgctactaataaataacaccttaaagaacatatctgtg---accataactttatct----ttaggattatttccttagg--tgcatg---ccccagat--------------gtggcctttattggcttatagggaataaacatAATGCCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 107680 280 - 306014 CATGAAAGATAAACCAATAATCATTAGTAA----TTA-------------TGTTTCCTGCCTTTTCACTTTA----AATT--ATTAAAATCTTCCTATT---------------------------------GTACATAATGTTTTTTTTTA-----ACTATT------TTGAATTATTTTAGTACATTTG-------CAAT-GATCCAGTCCCATTTTGTTGATATTTGG---GTTTCC-CATTTTTGCTACTAATAAATAACACCATAAAGAACATGT---------------CTTTATCT----TTAGGATTATTTCCTTAGA--TGCATG---CCCCAGAT--------------GTGGCCTTTATTGGC-TACAGGGAATAAACATAATGCCT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 148090 282 - 211231 CATGAAAAATAAACCAATAATCGTTAGTAG----TTC-------------TGTTTCCTGCCTTTTCACTTTA----AATC--ATTAAAATCTTCCTATT---------------------------------GTACATAATG---TTTTTTA-----AC-----------TGAGTTATTTTAGTGAATTTG-------CAAT-GATTcagtcccattttgttgatatttgg---gtttcc-tatttttgctactaataaataacaccatgaagaacgtatctgtg---accacaactttatct----tcaggattatttccttagA--TGCCTG---CCCCACAT--------------GTGGCCTTTATGGGCTCGCAGTGAATAAAC---CTGCCT i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 74350880 274 + 120421639 CATAAAAAGTAAACCAATAATC----GTAA----T---------------TGTTTCCTGAATTTTCAGTTAA----TATTAGATTAAGGTTTTCCTCTT--------------------------------GGTGCACAATC------TTTATGACCATTATT------TTGAATTGTT----TAAGTTTA-------CAAT-GAACCGTTCCCATTTT---------------ATTTCT-TTGTTTTTTTATTAATAAATAAGGAAATATGGAATATATTCATG---CACAACACTTTATAT----TTTGAATTATTTCCTTGAA-CTTTATA---ACCCCAAA--------------ATGGATGTTGTTGGTGCAGAGGAAATAAATATGACAGCT i mm10.chr13 C 0 N 0 s canFam3.chr34 11965510 367 + 42124431 CATGGGAAAGAAACCAAGAGTTGTAAGTACCGTTTTC-------------ACTTTCCTGT-GTTTCGTGTTG----TATT--ATTACGATCTTCCTCCTAATCCTCCTAATCCAGTGCTATGCAGCTTATAGGTGCACAGCT------GTGT-----GCAATGTAATCTTAGAATTATTTTAATGAGTTAGTTTATGACAATCCATCCACTCCTATTTTATTGATGTTTAGGTGGTTTCCAAATCTTTGCCAATACTAAAGAAGCCTGTGAAGACTCTAACCATGTATAATTTGTCTTTATTTACGATTAGGTTGCTTTTCTTGGAATTGTATGTTTCCTCAGGCCCAGTGTCCTCCAAGTGGACTTTACTGGCTTGGAGGAAATGAGCACTCTTCTT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 385565 303 - 913073 catggaaagtaaacaaataaaCATAAGTAA----TGTAATAATGTAATGGTGTGTCCTGCTTTTTCACCTAACGTTGAGT--ACTGAAATTTTATTCTT---------------------------------GTGTGCAATC------TTCATGAACATGATT------TTGAATTA---GAGTATGTTTT-------CAAC-AGtccattcccattttattgacatttaagttgtttccaaatttttgctatt-ataaagaacactgtaaaggatatttttgta---cataaagttttatttttatttactattatttccttagg-ctatatg---acccaaaa--------------atgaagttta---------agggact--atatgataTTT i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e colAng1.NW_012116910v1 822067 11332 - 1687011 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=212689.000000 s hg38.chr3_KI270934v1_alt 135907 61 + 163458 CCTAGACTTATTTT------TTTAAAGTTACGCTGTTTTAGTCCTGGGTTAGTTACCTA---------Attttgt-----t s panTro5.chr3 2600503 61 - 202621043 CCTAGACTTATTTT------TTTAAAGTTACGCTGTTTTAGTCCTGGGTTAGTTACCTA---------Attttgt-----t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 189160 61 - 190779 CCTAGACTTATTTT------TTTAAAGTTACGCTGTTTTAGTCCTGGGTTAGTTACCTA---------Attttgt-----t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 28828 61 + 880730 CCTAGACTTATTTT------TTTAAAGTTACACTGTTTTAGTCCTGGGTTAGTTACCTA---------Attttgt-----t i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179860953 67 - 180051392 CCTAGACTTTTTTT------TT---AGTTATGCAGTTTTGGTGCTGGGTGAGTTATCTATCTAAttttgttttgt-----t i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1329877 67 + 181584905 CCTAGACATTTTTT------TT---AGTTATGCAGTTTTGGTGCTGGGTGAGTTATCTATCTAAttttgttttgt-----t i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1422684 67 + 91010382 CCTAGACTTTTTTT------TT---AGTTATGCAGTTTTGGTGCTGGGTTAGTTATCTATCTAAttttgttttgt-----t i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 909612 66 - 930449 CCTAGAC-TTTTTT------TT---AGTTATGCAGTTTTGGTGCTGGCTTAGTTATCTATCTAAttttgttttgt-----t i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 204177295 72 + 204313951 CCTAGACAT-TTTT------TTGAAAGTTATGCAGTTTTGGTCCTAGGTTAGTTATCTA--TTTttttgttttgttttgtt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16319596 61 + 16417988 CCTAGACAT-TTTT------TTGAAAGTTACGCAATTTTGGTCCTACGTTAGTTATCTA--ttgttttg-----------t i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 107960 57 - 306014 CCTAGACAT-TTTT------TTGAAAGTTATGCAATTTTGGTCCTAGGTTAGTTATCTG--ttgt---------------t i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 148372 66 - 211231 CCTAGACA--TGTT------TTGAAAGTTACGCAATTTTGGTCCTAGGTTAGTTACCTA--tttttttgttttgt-----t i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 11965877 57 + 42124431 TGCAGACTTACCTTGAGAGGTTTGCAGTTGAGTACTTTCAG----------ATGACTTA---------ATTTTTT-----A i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 385868 54 - 913073 CGTAGACGT-TTTC------TTGAAAGTT----TATTTTAGTACT--TTCAGATATCTA---------ATTTTGT-----T i dasNov3.JH577625 C 0 N 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e colAng1.NW_012116910v1 822067 11332 - 1687011 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=31174.000000 s hg38.chr3_KI270934v1_alt 135968 6 + 163458 tggttt s panTro5.chr3 2600564 6 - 202621043 tggttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 189221 6 - 190779 tggttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 28889 6 + 880730 tggttt i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179861020 6 - 180051392 ttgtct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1329944 6 + 181584905 ttgtct i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1422751 6 + 91010382 ttgtct i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 909678 6 - 930449 ttgtct i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 204177367 6 + 204313951 ttgttt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16319657 6 + 16417988 ttgttt i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 108017 6 - 306014 ttgttt i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 148438 6 - 211231 ttgttt i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 11965934 6 + 42124431 TTGTCT i canFam3.chr34 C 0 N 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e colAng1.NW_012116910v1 822067 11332 - 1687011 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=449681.000000 s hg38.chr3_KI270934v1_alt 135974 90 + 163458 gagacggagtttcgctcttgttgcccaggctggagtggaatggcgggatctcggctcaccgcaacctctgcctccagggttcaagagatt s panTro5.chr3 2600570 90 - 202621043 gagacggagtttcgctcttgttacccaggctggagtggaatggcgggatctcggctcaccgcaacctctgcctccagggttcaagacatt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 189227 90 - 190779 gagacggagtttcgctcttgttgcccaggctggagtggaatggcgggatctcggctcaccgcaacctctgcctccagggttcaagacatt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 28895 90 + 880730 gagacggagtttcgctcttgttgcccaggctggagtggaatggcgggatctcggctcaccgcaacctctgcctccagggttcaagagatt i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179861026 90 - 180051392 gaaatggagtttcgctcttgttgcccaggctggagtgcaatggtgcgatctcagctcactgcaacctccgcctccagggttcaagagatt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1329950 90 + 181584905 gaaatggagtttcgctcttgttgcccaggctggagtgcaatggtgcgatctcagctcactgcaacctccacctccagggttcaagagatt i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1422757 90 + 91010382 gaaatggagtttcactcttgttgcccaggctggagtgcaatggtgcgatctcagcttactgcaacctccgcctccagggttcaagagatt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 909684 90 - 930449 gaaatggagtttcgctcttgttgcccaggctggagtgcaatggtgcgatctcagctcactgcaacctccgcctccagggttcaagcgatt i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 204177373 89 + 204313951 gagatggagtttagctcttgttg-caaggctggagtgcaatggcatgatcttgtgtcactataacctccacctccagggttcaagagatt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16319663 89 + 16417988 gagatggagtttagctcttgttg-caaggctggagtgcagtggcatgatcttggctcactacaacctccacctccagggttcaagagatt i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 108023 89 - 306014 gggatggagtttagctcttgttg-caaggctggagtgcagtggcatgatctcggcttactacaacctctgcctccagggttcaacagatt i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 148444 89 - 211231 gagatggagtttagctcttgttg-caaggctggagtgcagcggcatgaccttgtgtcaccacaacctccacctccagggttcaagagatt i aotNan1.NW_018494784v1 C 0 N 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e colAng1.NW_012116910v1 822067 11332 - 1687011 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=20195.000000 s hg38.chr3_KI270934v1_alt 136064 4 + 163458 ctcc s panTro5.chr3 2600660 4 - 202621043 ctcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 189317 4 - 190779 ctcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 28985 4 + 880730 ctcc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179861116 4 - 180051392 ctcc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1330040 4 + 181584905 ctcc i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1422847 4 + 91010382 ttcc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 909774 4 - 930449 ctcc i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 204177462 4 + 204313951 ctcc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16319752 4 + 16417988 ctcc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 108112 4 - 306014 ctcc i cebCap1.NW_016108150v1 C 0 N 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e colAng1.NW_012116910v1 822067 11332 - 1687011 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=11395.000000 s hg38.chr3_KI270934v1_alt 136068 3 + 163458 cgc s panTro5.chr3 2600664 3 - 202621043 cgc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 189321 3 - 190779 cgc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 28989 3 + 880730 cgc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179861120 3 - 180051392 cgc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1330044 3 + 181584905 cgc i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1422851 3 + 91010382 cgc i chlSab2.chr4 C 0 I 12032 s manLeu1.NW_012107609v1 909778 3 - 930449 cgc i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 204177466 3 + 204313951 tgc i calJac3.chr2 C 0 T 47777 s saiBol1.JH378155 16319756 3 + 16417988 tgc i saiBol1.JH378155 C 0 T 48915 e macNem1.NW_012013899v1 83673 69845 + 100774 T e colAng1.NW_012116910v1 822067 11332 - 1687011 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=79803.000000 s hg38.chr3_KI270934v1_alt 136071 58 + 163458 ggagcttacagtgagcggagatggcgccacttcactccagcctgggcaacagagcaag s panTro5.chr3 2600667 58 - 202621043 Tgagcttacagtgagcagagagggcaccacttcactccagcctgggcaacagagcaag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 189324 58 - 190779 ggagcttacagtgagcggagatggcgccacttcactccagcctgggcaacagagcaag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 28992 58 + 880730 ggagcttacagtgagcggagatggcgccacttcactccagcctgagcaacagagcaag i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179861123 49 - 180051392 ---------GGACagcggagatcacgccactgccctccagcctgggcaacacagcaag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1330047 49 + 181584905 ---------ggacagcggagatcacgccactgccctccagcctgggcaacagagcaag i macFas5.chr6 C 0 C 0 s manLeu1.NW_012107609v1 909781 49 - 930449 ---------GGACagcggagatcacgccactgccctccagcctgggcaacagagcaag i manLeu1.NW_012107609v1 C 0 C 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr2 204177469 47777 + 204313951 T e colAng1.NW_012116910v1 822067 11332 - 1687011 I e chlSab2.chr4 1422854 12032 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=7896.000000 s hg38.chr3_KI270934v1_alt 136129 3 + 163458 act s panTro5.chr3 2600725 3 - 202621043 act i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 189382 3 - 190779 act i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 29050 3 + 880730 act i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179861172 3 - 180051392 act i rheMac8.chr6 C 0 T 79665 s macFas5.chr6 1330096 3 + 181584905 act i macFas5.chr6 C 0 C 0 s manLeu1.NW_012107609v1 909830 3 - 930449 act i manLeu1.NW_012107609v1 C 0 N 0 s colAng1.NW_012116910v1 833399 3 - 1687011 ACT i colAng1.NW_012116910v1 I 11332 C 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr2 204177469 47777 + 204313951 T e chlSab2.chr4 1422854 12032 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=2918.000000 s hg38.chr3_KI270934v1_alt 136132 2 + 163458 AT s panTro5.chr3 2600728 2 - 202621043 AT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 189385 2 - 190779 ct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 29053 2 + 880730 AT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179781510 2 - 180051392 AT i rheMac8.chr6 T 79665 C 0 s macFas5.chr6 1330099 2 + 181584905 gt i macFas5.chr6 C 0 N 0 s chlSab2.chr4 1434886 2 + 91010382 AT i chlSab2.chr4 I 12032 C 0 s colAng1.NW_012116910v1 833402 2 - 1687011 AT i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr2 204177469 47777 + 204313951 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=60099.000000 s hg38.chr3_KI270934v1_alt 136134 31 + 163458 ATTGCTTTAATTTACTCTGCCGGCTATCTGG s panTro5.chr3 2600730 31 - 202621043 ATTGCTTTAATTTACTCTGCCGGCTATCTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 189387 31 - 190779 atTGCTTTAATTTACTCTGCCGGCTATCTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 29055 31 + 880730 ATTGCTTTAATTTACTCTGCCGGCTATCTGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179781512 31 - 180051392 ATTGCTTTAATTTACTCTGCCAGCTATCTGG i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 1434888 31 + 91010382 ATTGCTTTAATTTACTCTGCCAGCTATCTGG i chlSab2.chr4 C 0 I 16 s colAng1.NW_012116910v1 833404 31 - 1687011 ATTGCTTTAATTTACTCTGCCAGCTATCTGG i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr2 204177469 47777 + 204313951 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=569039.000000 s hg38.chr3_KI270934v1_alt 136165 491 + 163458 AGAGATGCAACCTCATCAGCAGAAATTATTTCCACCCTGCTGC-TTTTTAAA--TGTTATTTCCTATAGCCAGGTACTGAGCCCTTCAATTGAGGTCTAAACCCTCCA-CCCTCTCCCTCCGGGATTGCCAAGCCTGTGGTTTCAGTTCCATGCTCCCAGGTAGATTGTGTCAACTCAAAGT-CAATGCGCTTATGAAATACTTTTTGTGGTTTTTTTCTTAATTTTAAGA-GGTTTTTTTTTA---AAATATGTTTTTGTTTCATGGAGGCGACACCCTCTGTCTCTGAGTTGTGGG-AGCCTTCCTCCTTCAGTCTGCATGTACTGAAGCCAGTGTTTGCCGTACCAGCCCCTCAGCCGCAGCAGCCCACAGTGAGGTGCAGGTGCTCACGCCATCGCCCCAGAGAGCTCCTCCATTCGCccctccacccgtagcccctcgaaaccactgccctgctccccgacacggta-cactgtcttctccaagatgtcatgtgttg s panTro5.chr3 2600761 493 - 202621043 AGAGATGCAACCTCATCAGCAGAAATTATTTCCACCCTGCTGC-TTTTTAAA--TGTTATTTCCTATAGCCAGGTACTGAGCCCTTCAATTGAGGTCTAAACCCTCCA-CCCTCTCCCTCCGGGATTGCCAAGCCTGTGGTTTCAGTTCCATGCTCCCAGGTAGATTATGTCAACTCAAAGT-CAATGCGCTTATGAAATACTTTTTGTGGGTTTTTTCTTAATTTTAAGA-GTTTTTTTTTTTTTTAAATATGTTTTTATTTCATGGAGGCGACACCCTCTGTCTCTGAGTTGTGGG-AGCCTTCCTCCTTCAGTCTGCATGTACTGAAGCCAGTGTTTGCCGTAC-AGCCCCTCAGCCGCAGCAGCCCACAGTGAGGTGCAGGTGCTCACGCCATCGCCCCAGAGAGCTCCTCCATTCGCccctccacccgtagcccctcgaaaccactgccctgctccccgacacggta-cactgtcttctccaagatgtcatgtgttg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 189418 489 - 190779 TGAGATGCAACCTCATCAGCAGAAATTATTTCCA-CCTGCTGC-TTTTTAAA--TGTTATTTCCTATAGCCAGGTACTGAGCCCTTCAATTGAGGTCTAAACCCTCCA-CCCTCTCCCTCCGGGATTGCCAAGCCTGTGGTTTCAGTTCCATGCTCCCAGGTAGATTATGTCAACTCAAAGT-CAATGTGCTTATGAAATACTTTTTGTGG-TTTTTTCTTAATTTTAAGA-GTTTTTTTTTTA---AAATATGTTTTTGTTTCATGGAGGCGACACCCTCTGTCTCTGAGTTGTGGGAAGCCTTCCTCCTTCAGTCTGCATGTACTGAAGCCAGTGTTTGCCGTAC-AGCCCCTCAGCCGCAGCAGCCCACAGTGAGGTGCAGGTGCTCACGCCATCGCCCCAGAGAGCTCCTCCATTCGCccctccacccgtagcccctcgaaaccactgccctgctccccgacacggta-cactgtcttctccaagatgtcatgtgttg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 29086 482 + 880730 AGAAATGCAACCTCATCAGC---AATTATTTCCACCTTGCTGCTTTTTTAAA--TGTTATTTCCTATAGCCAGGTACTGAGCCCTTCAATTGAGGTCTAAACCGTCCA-CCCTCTCCCTCCGGGATTGCCAAGCCTGTGGTTTCAGTTCCATGCTCCCAGGTAGATTATGTCAA-TCAAAGT-CAATGCGCTTATGAAATACTTTTTGTG--TTTTTTCTTAATTTTAAGA-GTTTTTTTTTT----AAATATGTTTTTGTTTCATGGAGGTGACACCCTCTGTCTCTGAGTTGTGGG-AGCCTTCCTCCTTCAGTCTGCATGTACTGAAGCCAGGGTTTGCTGTAC-AGCCCCTCAGCCGCAGCAGCCCACAGTGAGGTGCAGGTGCTCACGCCAC--CCCCAGAGAGCTCCTCCATTCGCccctccacccgtatcccctcgaaaccactgccctgctccccaacacggta-cactgtcttctccaagatgtcatgtgttg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179781543 469 - 180051392 GGAAATGCAACCTCATCAGCAGAAATTATTTCCTCCCTGCCGC-TTTTGAAATCTGTTATTTCCTATAGCCAGGTACTGAGCCCTTCAACTGAAGTCTAAACCCTCCA-CCCTCTCCCTCCGGGGTCGCCAAGCCGGTGGTTT--GTTCCATGCTCCCAGGCAGATTGTGTCAACTCAAAGTCCAACGTGCTTAAGAAATA-----------------CTTAATTTTAGGAGGTTTTTTTTTTT---A---ATGTTTTTGTTTCATGGAGGTGACACCCTCTGTCTTTGACTTGTGGG-CGCCTTCCTCCTTCAGTCTGCATGTACTGAAGCCAGTGTCTGCTGTAC-AGCCTCTCAGCC---GCAGCCCACAGTGAGGTGCAGGTGCTCA-GCCTTCGCCCCAGAGAGCGCCtccattcgcccctccacccgtagcccctcgaaaccactgccctgcttcccaacacggtagcactgtcttctccaaggtgtcatgtggcg i rheMac8.chr6 C 0 C 0 s colAng1.NW_012116910v1 833435 484 - 1687011 GGAAATGCAACCTCATCAGCAGAAATTATTTCCTCCCTGTCGC-TTTTGAAATCTGTTATTTCCTACAGCCAGGTACTGAGCCCTTCAATTGAGGTCTAAACCCTCCGCCCCTCTCCCTCTGGGGTCGCCAAGCCGGTGGTTT--GTTCCACGCTCCCAGGCAGATTGTGTCAACTCAAAGTCCAACGCGCTTATGCAATAC-TTTTGTGT-TTTTTTCTTAATTTTAGGA-GTTTTTTTTTTT---A---ATGTTTTTGTTTCATGGAGGTGACACCCTCTGTCTTTGACTTGTGGG-CGCCTTCCTCCTTCAGTCTGCATGTACTGAAGCCAGTGTTTGCTGTAC-AGCCTCTCAGCC---GCAGCCCACAGTGAGGTGCAGGTGCTCA-GCCTTTGCCCCAGAGAGCGCCTCCATTCGCCCCTCCATCCGTAGCCCCTTGAAACCACTGCCCTGCTCCCCAACACAGTAGCACTGTCTTCTCCAAGATGTCATGTGGCA i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr2 204177469 47777 + 204313951 T e chlSab2.chr4 1434919 16 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1072186.000000 s hg38.chr3_KI270934v1_alt 136656 601 + 163458 gcatcctttggcctgtgcccaccgaaactagcttccttcaacgggcatgtagcctgggagacctggggcattt-gggtgcatctttccactgctggttggtgccccctgtgtggaagcatccgcgttagttcacgccttctcctgctcctgccgacggacattttgttttcttccagttattggcaatgaggaatgaggcctaaacacttgtgtgcaggtttgtgtgtgcacgtttaagttttcccttgggggacatttcagcagtggggttgctggatgacatggtaaggatgtgcttaacttcgtaagaaactccaggaccactttccagcatggcgggacccctcccattcccactgcagcttatgagggtcccagttcctctgcatcatcactagaacctgggttggcccatgggttttgtctgtttttagccattttaatggatttgcagaggtactgctgactggcatttctccagcatctctatgatgttgagcctctttctcgggcaatatgccctccttataccttctttgatgaggcctccgttccaatattggccctctctttaatactggggtttttactttcttatggt s panTro5.chr3 2601254 601 - 202621043 gcatcctttggcctgtgcccaccgaaactagcttccttcaccgggcatgtagcctgggagacctggcgcattt-gggtgcatctttccactgctggttggtgccccctatgtggatgcatccgcgttggttcacaccttctccagctcctgccgacggacattttgttttcttccagttattggcaatgaggaatgaggcctaaacacttgtgtgcaggtttgtgtgtgcacgtttaagttttcgcttgggggacatttcaggagtggggttgctggatgacatggtaaggatgtgcctaacttcgtaagaaactccaggaccactttccagcatggcgggacccctcccattcccactgcagcttatgagggtcccagttcctctgcatcgtcactagaacctgggttggcccatgggttttgtctgtttttagccattttaatggatttgcagaggtactgctgactggcatttctccagcatctctatgatgttgagcctctttctcgggcaatatgccctccttataccttctttgatgaggcctccattccaatattggccctctctttaatactggggtttttactttcttatggt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 189907 601 - 190779 acatcctttggcctgtgcccaccgaaactagcttccttcaacgggcatgtagcctgggagacctggcgcattt-gggtgcatctttccactgctggttggtgccccctatgtggacgcatccgcattggttcacgccttctcctgctcctgccgacggacattttgttttcttccagttattggcaatgaggaatgaggcctaaacacttgtgtgcaggtttgtgtgtgcacatttaagttttcgcttgggggacatttcaggagtgcggttactggatgacgtggtaaggatgtgcttaacttcgtaagaaactccaggaccactttccagcatggcgggacccctcccattcccactgcagcttatgagggtcccagttcctctgcatcgtcactagaacctgggttggcccatgggttttgtctgtttttagccattttaatggatttgcagaggtactgctgactggcatttctccagcatctctatgatgttgagcctctttctcgggcaatatgccctccttataccttctttgatgaggcctccattccaatattggccctctctttaatactggggtttttactttcttatggt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 29568 600 + 880730 gcatccttcggcctgtgcccaccgaaactagcttccttcaccgggcatgtagcctgggagacctggcgcattt-gggtgcatctttccactgctggttggtgtcccccatgtggaagcatccgcgttgcttcacgccctctcctgctcctgccgatggacattttgttttcttccagttattggcaatgaggaatgaggcctaaacacttgtgtgcaggtttgtgtgtgcacgtttaagttttcgcttgggggacatttcaggagtggggttgctggatgacatggtaaggatgtgcttaacttcgtaagaaactcccggaccactttccagcatggcgggacccctcccattcccactgcagcttatgagggtcccagttcctctgcatcatcactagaacctgggttggcccatggtttttgtctg-ttttagccattttaatagatttgcagaggtactgttgactggcatttctccagcatctctatgatgttgagcctctttctcgggcaatatgccctccttataccttctttgatgaggcctccattcaaatatttgccctctctttactactggggtttttactttcctatggt i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179782012 596 - 180051392 gcatccttcggcctgtgcccactgaaactagctttcttcaccaggcatgtggcctgggagacctggggcattttgggtgcatgtttccactgctggttggtgccccctgtgtggaagcatccgcgttggttcacgcctt------ctcctgccgatggacaatttgttttcttccagttattggcaatgagcaatgaggcctaaacacttgagtgcaggtttgtgtgtgcacgtttaagttttctcttgggggaaatttcaggagtggggttgctggatgacgtggtaaggatgtgcttaactcaataagaaactcccggaccacgttccagcatggcgggatccctcccattcccactgccgcttatgagggtcccggttcctctgcatcgtcactagaagctgggttggcccgtggtttttgtctgtttttagccattttaatagatttgcagagctactgttgactggcatttctccagcatctctatgatgttgagcctctttctcgggcaatatgccctccttataccttccttgatgagggctccattaaaatatttgccttctctttaatactggggcttttactttcttatggt i rheMac8.chr6 C 0 C 0 s manLeu1.NW_012109696v1 16042 594 - 6207128 GCATCCTTCGGCCTGTGCCCACCAAAACTAGCTTTCTTCACCAGGCATGTGGCCTAGGAGACCTGGGGCATTTTGGGTGCATGtttccactgctggttggtgccccctgtgtggaagcatccgcgttggttcacgcctt------ctcctgccaatggacaa--tgttttcttccagttattggcaatgagcaatgaggcctaaacacttgagtgcaggtttgtgtgtgcacgtttaggtgttctcttgggggaaatttcaggagtggggttgctggatgacgtggtaaggatgtgcttaactcaataagaaactcccggaccacgttccagcatgacgggatccctcccattcccactgccgcttatgagggtcccagttcctctgcatcatcactagaagctgggttggcccgtggtttttgtctgtttttagccattttaatagatttgcagaggtactgttgactggcatttctccagcatctctatgatgttgagcctctttctcgggcaatatgccctccttataccttccttgatgagggctccattaaaatatttgccttctctttaatactgggggttttactttcttatggt i manLeu1.NW_012109696v1 N 0 C 0 s colAng1.NW_012116910v1 833919 596 - 1687011 GCATCCTTCGGCCTGTGCCCACCGAAACTAGTTTTCTTCACCGGGCATGTGGCCTGGGAGACCTGGGGCATTTGGGGTGCATGtttccactgctggttggtgccccctgtgtggaagcatctgcattggttcacgcctt------ctcctgctgatggacattttgtttccttccagttattggcaatgagcaatgaggcctgaacacttgagtgcaggtttgtgtgtgcacgtttaagttttctcttgggggaaatttcaggagtggggttgctggatgacgtggcaaggatgtgcttaactcaataagaaactcccggaccacgttccagcatggtgggatccctcccattcccactgccacttatgagggtcctagttcctctgcatcgtcactagaagctgggttggcccatggtttttgtctgtttttagccattttaatagatttgcagaggtactgttgactggcatttctccagtgtctctatgatgttgagcctctttctcgggcaatatgccctccttataccttccttgatgaggcctccattcaaatatttgccttctctttaatactggggtttttactttcttatggt i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr2 204177469 47777 + 204313951 T e chlSab2.chr4 1434919 16 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=604381.000000 s hg38.chr3_KI270934v1_alt 137257 274 + 163458 taagttttgatggttcttcatatatcctgcgtgccagtaggttgtgagacgtgtgattcacaaatg-tttatttctagaccatag-ttcatgtttcattctctttggatttttatattgctttatagaattataattttaaatttatgactaaatttaatttgtcaatctt--atgaatcatgcttttggtgtcatgtctaagaacttttcgcctaaccccaggccatacgaattttcccctgtgtttttagctaagggtttgatagcgttatgttct s panTro5.chr3 2601855 274 - 202621043 taagttttgatggttcttcatatattctgcatgccagtaggttgtgagatgtgtgattcacaaatg-tttttttctagaccatag-tttgtgtttcattctcttt--atttttatattgctttatagaattataattttaaatttatgactacatttaatttgtcaatcttttatgaatcatgcttttgctgtcatgtctaagaacttttcgcctaaccccaggccatacaaattttcccctgtgtttttacctaagggtttgatagcgttatgttct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 190508 271 - 190779 taagttttgatggttcttcatatattctgcatgccagtaggttgtgagatgtgtgattcacaaatg-tttttttctagaccatag-tttgtgtttcattctcttt--atttttatattgctttatagaattataattttaaatttatgac---atttaatttgtcaatcttttatgaatcatgcttttgctgtcatgtctaagaacttttcgcctaaccccaggccatacaaattttcccctgtgtttttacctaagggtttgatagcgttatgttct i panPan2.chrUn_NW_014024201v1 C 0 N 0 s gorGor5.CYUI01015759v1 30168 275 + 880730 tcagctttgatgcttcttcatatattctgcgtgccagtacgttgtgagatgtgtgattcacacata-tttttttctagaccatag-tttgtgtttcattctctttagatttttatattgctttatagaattataattttaaatttatgactacatttaacttgtcagtcttttatgaatcatgcttttggtgtcatgtctaagaacttttcgcctaaccccaggccatacaagttttcccc-gtgtttttacctaagggtttgatagcgttatgttct i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179782608 276 - 180051392 taagttttgacggttcttcgtatattctgcgtgccagtacattgtgagatgtgtgattaaccagtattttttttctagcccatag-tttgcatttcattcttttaagatttttatattgctttatagaattataattttaag-ttatgactaaatttaatttgtcaatcttctatgaatcatgcctttggtgtcatgtctaagaacttttcacctaaccccaggccatacaaattttcccctgtgtttttatctaatggttttatagtgttgtgttct i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 1434935 275 + 91010382 taagttttgacggttcttcgtatattctgcgtgccagtacattgtgagatgtgtgattaaccaata-tttttttctagcccatag-tttgcatttcattcttttaagatttttatattgctttatagaattataattttaaa-ttatgactaaatttaatttgtcaatcttctatgaatcatgcctttggtgtcatgtctaagaacttttcacctaaccccaggccatacaaattttcccctgtgtttttatctaatggttttatagtgttatgttct i chlSab2.chr4 I 16 C 0 s manLeu1.NW_012109696v1 16636 274 - 6207128 taagttttgacagttcttcgtatattctgcgtgccagtacattgtgagatgtgtgattaaccaata-tttttttctagcccatag-tttgcatttcattc-gttaagatttttacattgctttatagaattataattttaaa-ttatgactaaatttaatttgtcaatcttctatgaatcatgcctttggtgtcatgtctaagaacttttcacctaaccccaggccatacaaattttcccctgtgtttttatctaatggttttatagtgttatgttct i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 834515 275 - 1687011 taagttttgacagttcttcgtatattctgcatgccagtacgttgtgagatgtgtgattcaccaata-tttttttctagcccatagttttgcatttcattcttttaagatttttatattgctttatagaattataattttaaatttatgactaaatttaatctgtcaatcttctatgaatcatgcctttggtgtcatgtctaagaacttttcacctaaccccaggccatacaaattttccc--gtgtttttatctaatggttttatagcgttctgttct i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr2 204177469 47777 + 204313951 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=456887.000000 s hg38.chr3_KI270934v1_alt 137531 284 + 163458 ccatttaggcctttaataaatgttgaggaacattttgtGACCGCCATGGCCATACCTTTCTCCATCTCTCACGGTATCGTGGGCATTTGCAGCTCCCAGTGCGCCGTGCTGTTCCCGTCTTCTTGGTCTGCTCCTCCTGTCATACCTTTCTCCGTCTCTCACAGTATCGTGGGCGTTTGCAGCTCCCAGTGCCCCGTGCTGTTCCCGGCTTCTTGGTCCGCTCTTCCTGTGAGTTTCAGGGCACGTCTTAGTGCTGGCACTGTCCTGGTCCATC-GGGGGTCCCA s panTro5.chr3 2602129 285 - 202621043 ccatttaggcctttaataaatgttgagtaacattttgtgtCCGCCATGGCCATACCTTTCTCCATCTCTTACGGTATCATGGGCATTTGCAGCTCCCAGTGCGCCGTGCTGTTCCTGTCTTCTTGGTCTGCTCCTCCTGTCATACCTTGCTCCATCTCTCACAGTATCGTGGGCGTTTGCAGCTCCCAGTGCCCCGTGCTGTTCCCGGCTTCTTGGTCCGCTCTTCCTGTGAGTTCCAGGGCACGTCTTAGTGCTGGCGCTGTCCTGGTCCATCAGGGGGTCCCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204918252 285 + 205426864 ccatttaggcctttaataaatgttgagtaacattttgtgtCCGCCATGGCCATACCTTTCTCCATCTCTTACGGTATCATGGGCATTTGCAGCTCCCAGTGCGCCGTGCTGTTCCTGTCTTCTTGGTCTGCTCCTCCTGTCATACCTTGCTCCATCTCTCACAGTATCGTGGGCGTTTGCAGCTCCCAGTGCCCCGTGCTGTTCCCGGCTTCTTGGTCCGCTCTTCCTGTGAGTTCCAGGGCACGTCTTAGTGCTGGCGCTGTCCTGGTCCATCAGGGGGTCCCA i panPan2.chr3 N 0 C 0 s gorGor5.CYUI01015759v1 30443 285 + 880730 ccatttaggccgttaataaatgttgagtaacattttgtgtCCGCCATGGCCATACCTTTCTCCATCTCTCACGGTATCGTGGGCATTTGCAGCTCCCAGTGCGCCGTGCTGTTCCCGTCTTCTTGGTCCGCTCCTCCTGTCATACCTTTCTCCATCTCTCACGGTATCGTGGGCGTTTGCAGCTCCCAGTGCCCCGTGCTATTCCCGGCTTCTTGGTCCGCTCTTCCTGTGAGTTCCAGGGCACGTCTTAGTGCTGGCGCTGTCCTGGTCCATCAGGGGGTCCCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179782884 195 - 180051392 ccatttaggcctgtgataaatgttgagtaacattttgtgTCAGCCACGGCCATACCTTT------------------------------------------------------------------------------------------TTCCGTCTCTGACAGTATCTTGGGTGTTTGCAGCTCCCAGTGCCCTGTGCAGTTCCCGTCTTCTTGGTCCGCTCTTTCTGTGAGTTTCAGGGCGTGTCTTAGTGCTGACGCTGTCCTGGCCCATCAGGGGGTCCCA i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 1435210 195 + 91010382 ccatttaggcctgtgataaatgttgagtaacattttgtgtcagCCACGGCCATACCTTT------------------------------------------------------------------------------------------TTCCGTCTCTGACAGTATCTTGGGTGTTTGCAGCTCTCAGTGCCCCGTGCAGTTCCCGTCTTCTTGGTCCGCTCTTTCTGTGAGTTTCAGGGCGTGTCTTAGTGCTGACGCTGTCCTGGTCCATCAGGGGGTCCCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 16910 195 - 6207128 ccatttaggcctgtgataaatgttgagtaacattttgtgTCAGCCACGGCCATACCTTT------------------------------------------------------------------------------------------TTCCGTCTCTGACAGTATCTTGGGTGTTTGCAGCTCTCAGTGCCCTGTGCAGTTCCCGTCTTCTTGGTCCACTCTTTCTGTGAGTTTCAGGGCATGTCTTAGTACTGACGCTGTCCTGGCCCATCAGGGGGTCCCA i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 834790 195 - 1687011 ccatttcggcctgtgataaatgttgagtgacattttgtgtcagCCATGGCCATACCTTT------------------------------------------------------------------------------------------TTCCGTCTCTGACAGTATCTTGGGTGTTTGCAGCTCCCCGTGCCCCAGGCAGTTCCTGTCTTCTTGGTCCGCTCTTTCTGTGAGTTTCAGGGCGTGTGTTAGTGCTGACGCTGTCCTGGTCCATCAGGGGGTCCCA i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 83673 69845 + 100774 T e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr2 204177469 47777 + 204313951 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=153904.000000 s hg38.chr3_KI270934v1_alt 137815 49 + 163458 TGAGCTTCTCCATGTGGGAAGGTTGGGACTGTGATGTTGACGGGATGCC s panTro5.chr3 2602414 49 - 202621043 TGAGCTTGTCCGTGTGGGAAGGTTGGGACTGTGATGTTGACGGGATGCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204918537 49 + 205426864 TGAGCTTGTCCGTGTGGGAAGGTTGGGACTGTGATGTTGACGGGATGCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 30728 49 + 880730 TGAGCTTGTCCGTGTGGGAAGATTGGGACTGTGATGCTGACGGGATGCC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179783079 49 - 180051392 TGGGCTTGTCCGTGTGGGAAAGTCGGGACTGTGATGTTGACGGGATGCC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 13828 49 + 100774 TGAGCTTGTCCGTGTGGGAAAGTCAGGACTGTGATGTTGACGGGATGCC i macNem1.NW_012013899v1 T 69845 C 0 s chlSab2.chr4 1435405 49 + 91010382 TGGGCTTCTCCGTGCGGGAAAGTCGGGACTGTGATGTTGACGGGATGCC i chlSab2.chr4 C 0 I 131 s manLeu1.NW_012109696v1 17105 49 - 6207128 TGGGCTTGTCCGTGTGGGAAAGTCGGGACTGTGATGTTGACGGGATGCC i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 834985 49 - 1687011 TGGGCTTGTCCGTGTGGGAAAGTCGGGACTGTGATGTTGACGGGATGCC i colAng1.NW_012116910v1 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr2 204177469 47777 + 204313951 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=600.000000 s hg38.chr3_KI270934v1_alt 137864 1 + 163458 C s panTro5.chr3 2602463 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chr3 204918586 1 + 205426864 C i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 30777 1 + 880730 C i gorGor5.CYUI01015759v1 C 0 C 0 e macNem1.NW_012013899v1 13877 0 + 100774 C e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr2 204177469 47777 + 204313951 T e colAng1.NW_012116910v1 835034 0 - 1687011 C e manLeu1.NW_012109696v1 17154 0 - 6207128 C e chlSab2.chr4 1435454 131 + 91010382 I e rheMac8.chr6 179783128 0 - 180051392 C e nomLeu3.chr11 2900956 4012 - 123690457 I a score=181479.000000 s hg38.chr3_KI270934v1_alt 137865 65 + 163458 TGTGAGTCAGGAGGAGGTGCTGACGGGGGTTTCCATGTAGGAGAGAGAGGTGTTTGGTTTTCCGG s panTro5.chr3 2602464 65 - 202621043 TGTGAGTCAGGAGGAGGTGCTGACGGGGGTTTCCATGTAGGAGAGAGAGATGTTTGGTTTTCCGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204918587 65 + 205426864 TGTGAGTCAGGAGGAGGTGCTGACGGGGGTTTCCATGTAGGAGAGAGAGGTGTTTGGTTTTCCGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 30778 65 + 880730 TGTGAGTCAGGAGGAGGTGCTGACGGGGGTTTCCACGTAGGAGAGAGAGGTGTTTAGTTTTCCGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179783128 61 - 180051392 -GTGAGTT---GGGAGGTTCTGACGGGGGTTTCCATGTAGGAGAGAGAGGTGTTTGGTTTTCCGG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 13877 61 + 100774 -GTGAGTT---GGGAGGTTCTGACGGGGGTTTCCATGTAGGAAAGAGAGGTGTTTGGTTTTCCGG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1435585 62 + 91010382 TGTGAGTC--GGGGAGGTTCTGAC-GGGGTTTCCATGTAGGAGAGAGAGGTGTTTGGTTTTCTGG i chlSab2.chr4 I 131 C 0 s manLeu1.NW_012109696v1 17154 61 - 6207128 -GTGAGTT---GGGAGGTTCTGACGGGGGTTTCCATGTAGGAGAGAGAGGTGTTTGGTTTTCCGG i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 835034 62 - 1687011 -GTGAGTC--GGGGAGGTGCTGACAGGGGTTTCCATGTAGGAGAGAGAGGTGTTTGGTTTTCTGG i colAng1.NW_012116910v1 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr2 204177469 47777 + 204313951 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=134539.000000 s hg38.chr3_KI270934v1_alt 137930 35 + 163458 ATGGGGCAGACTTGAGAGGGGACAAACTTGAGAAA s panTro5.chr3 2602529 35 - 202621043 ATGGGGCAGACTTGAGAGGGGACAAACTTGAGAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204918652 35 + 205426864 ATGGGGCAGACTTGAGAGGGGACAAACTTGAGAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 30843 35 + 880730 ATGGGGCAGACTTGAGAGGGGACAAACGTGAGAAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179783189 35 - 180051392 ATGGGGCAGACTTGAGAGGGGACAAACTTGAGAAA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 13938 35 + 100774 ATGGGGCAGACTTGGGAGGGGACAAACCTGAGAAA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1435647 35 + 91010382 ATGGGGCAGACTTGAGAGGGGACAAACGTGAGAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 17215 35 - 6207128 ATGGGGCAGACTTGAGAGGGGACAAACTTGAGAAA i manLeu1.NW_012109696v1 C 0 I 6431 s colAng1.NW_012116910v1 835096 35 - 1687011 ATGGGGCAGACTTGAGAGGAGACAAACTTGAGAAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 117213273 35 - 159171411 ATAGGCCAGACTTGGGAAGGGACAAACGCCAGAAA i calJac3.chr5 n 47777 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=429583.000000 s hg38.chr3_KI270934v1_alt 137965 149 + 163458 TGCCACCAATGAGAAGGGCACGCACAGCAGGTCTCGGGGCCGCCCAGCCGTGTGGGAGACAAACGTGGATGTGTCAGTGGCCACGCCAGGAGGTAAACCCTCAACCAAGGGCCTCTGGGTGTCCAAGACCAAGTCTTGCTCAAGAGGTG s panTro5.chr3 2602564 149 - 202621043 TGCCACCAATGAGAAGGGCAGGCGCAGCAGGTCTTGGGGCCGCCCAGCCGTGTGGGAGCCAAACGTGGATGTGTCAGTGGCCACGCCAGGAGGTAAACCCTCAACCAAGGGCCTCTGGGTATCCAAGACCAAGTCTTGCTCAAGAGGTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204918687 149 + 205426864 TGCCACCAATGAGAAGGGCAGGCACAGCAGGTCTCGGGGCCGCCCAGCCGTGTGGGAGCCAAACGTGGATGTGTCAGTGGCCACGCCAGGAGGTAAACCCTCAACCAAGGGCCTCTGGGTGTCCAAGACCAAGTCTTGCCCAAGAGGTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 30878 148 + 880730 TGCCACCAATGAGAAGTGTAGGCACAGCAAGTCTCGGGGCCGCCCAGCTGTGT-GGAGCCAAACGTGGATGTGTCAGTGGCCACGCCAGGAGGTAAACCCTCAACCAAGGGCCTCTGGGTGTCCAAGACCAAGTCTTGCTCAAGAGGTG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179783224 149 - 180051392 TGCCACCAAGGGGAAGCCCAGGCAGAGCAGGTCTCGGGGCCGCCCAGTCGTGTGGGCGCCAAACGTGGATGTGTCAGTGGCCATGCCAGGAGGTAAACCCTCACCCAAGGGCCTCTGGGTGTCCACGGCCAAGTCTTGTTCAAGAGGTG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 13973 149 + 100774 CGCCACCAAAGGGAAGCCCAGGCAGAGCAGGTCTCGGGGCCGCCCAGTCGTGTGGGCGCCAAACGTGGATGTGTCAGTGGCCATGCCAGGAGGTAAACCCTCACCCAAGGGCCTCTGGGTGTCCACGGCCAAGTCTTGTTCAAGAGGTG i macNem1.NW_012013899v1 C 0 M 552 s chlSab2.chr4 1435682 149 + 91010382 TGCCACCAAGGGGAAGCCCAGGCAGAGCAGGTCTTGGGGCCGCCCAGTCGTGTGGGCGCCAAACGTGGATGTGTCAGTGGCCAGGTCAGGAGGTAAACCCTCACCCAAGGGCCTCTGGGTGTCCAAGGCCAAGTCTTGTTCAAGAGGTG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 835131 149 - 1687011 TGCCACCAAGGGGAAGCCCAGGCAGAGCAGGTCTCGGGGCCGCCCAGTCATGTGGGCGCCAAACGTGGATGTGTCAGTGGCCAGGCCAGGAGGTAAACGCTTGCCCAAGGGCCTCTGGGTGTCCAAGGCCAAGTCTTGTTCAAGAGGTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 117213308 149 - 159171411 TGCTGCCAACGAGAGGCCCAGGCAGAGCCGGTCTTGGGGCTGCCCAGCCATGTGTGCGCCAAACGTGGATGTGTCAGTGGCCATGCCAGGAGTTAAGCCCTCCGCCACGGGCCTCTGGATGGACAAGGCCAAGTCTTGTTGAAGAGGTG i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e manLeu1.NW_012109696v1 17250 6431 - 6207128 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=191677.000000 s hg38.chr3_KI270934v1_alt 138114 83 + 163458 TGTTCAGCTGAGCCAACCATGGCAGAaatgcataagggagatcccacggttcctctg-tttaaatcccctgctaatcccaccag s panTro5.chr3 2602713 83 - 202621043 CGTTCAGCTGAGCCAACCATGGCAGAAATGcataagggagatcccatggttcctctg-tttaaatcccctgctaatcccaccag i panTro5.chr3 C 0 C 0 s panPan2.chr3 204918836 83 + 205426864 CGTTCAGCTGAGCCAACCATGGCAGAAATGcataagggagatcccatggttcctctg-tttaaatcccctgctaatcccaccag i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 31026 83 + 880730 CGTTCAGCTGAGCCAACCATGGCAGAAATGcataagggagatcccatggttcctctg-tttaaatcccctgctaatcccaccag i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179783373 82 - 180051392 CGTTCAGCTGAGCCAACCATGGCAGAaatgcacaggggaaatcccatggttcctctg-tttaaatcccctgctaatcccaccg- i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 1435831 83 + 91010382 TGTTCAGCTGAGCCAACAATGGCAGAAATGCACAGGGGAAATCCCACGGTtcctctg-tttaaatcccctgctaatcccacccg i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 835280 83 - 1687011 CGTTCAGCTGAGCCAACCATGGCAGAAATGCACACGGGaaatcccatggttcctctg-tttaaatcccctgctaatcccacccg i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 117213457 84 - 159171411 AGTTCAGCTGAGCCAACCATAGCAGAaatacacgagggagaccccatggctgctctgattaaaatcccctgctaatcccacctg i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 14122 552 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e manLeu1.NW_012109696v1 17250 6431 - 6207128 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=170143.000000 s hg38.chr3_KI270934v1_alt 138197 55 + 163458 actcagagaagcagccaagtcctcacagcagcctgcaacccccgcctgactcggc s panTro5.chr3 2602796 55 - 202621043 tctcagagaagcagccaagtcctcacagcagcctgcaacccccgcctgactcggc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204918919 55 + 205426864 tctcggagaagcagccaagtcctcacagcagcctgcaacccccgcctgactcggc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 31109 55 + 880730 tctcagagaagcagccaagtcctcacagcagcctgcaacccccgcctgactcggc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179783455 55 - 180051392 actcagagaagcagccaagtcctcacagcagcctgcaacccccacctgactcagc i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 1435914 55 + 91010382 actcagagaagcagccaagtcctcacagcagcctgcaacacccacctgactcagc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 23681 55 - 6207128 actcagagaagcagccaagtcctcacagcagcctgcaacccccacctgactcagc i manLeu1.NW_012109696v1 I 6431 C 0 s colAng1.NW_012116910v1 835363 55 - 1687011 actcagagaagaagccaagtcctcacagcagcctgcaacccccgcctgcctcggc i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 117213541 55 - 159171411 gctcagaggaggagccaagtcctcacggctgcctgcgacccccgcctgactcggc i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 14122 552 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=662131.000000 s hg38.chr3_KI270934v1_alt 138252 189 + 163458 ctcctcttggctctgattctctgcacccttctatcc----ctgtctcTTCTTCCATCA--GAGAGGAGATCCGGCACGTTTATCCTGGTGGATTCAAACCCATCTTTGCCCCACATATAGTCACCGGAATGAATAGGTATAATCTAGAAAGAGTCCTTTTGAAAAAGAAAAAAGCAGGCCGGGCA---TGGTGGCTCA s panTro5.chr3 2602851 189 - 202621043 ctcctcttggctctgattctctgtacccttctatcc----ctGTCTCTTCTTCCATCA--GAGAGGAGATCCGGCACGTTTATCCTGGTGGATTCAAACCCATCTTTGCCCCACATATAGTCACCAGAATGAATAGGTATAATCTAGAAAGAGTCCTTTTGAAAAAGAAAAAAGCAGGCCGGGCA---TGGTGGCTCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204918974 186 + 205426864 ctcctcttggctctgattctctgtacccttctatcc----ctgtctcTTCTTCCATCA--GAGAGGAGATCCGGCACGTTTATCCTGGTGGATTCAAACCCATCTTTGCCCCACATATAGTCACCGGAATGAATCGGTATAATCTAGAAAGAGTCCTTTTGAAA---AGAAAAGCAggccgggca---tggtggctca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 31164 189 + 880730 ctcctcttggctctgattctctgtaccctcctatcc----ctgtctcttcttccatca--GAGAGGAGATCCGGCACGTTTATCCTGGTGGACTCAAACCCATCTTTGCCCCACATATAGTCATCAGAATGAATAGGTATAATCTAGAAAGAGTCCTTTTGAAAAAGAAAAAAGCAGGCCGGGCA---TGGTGGCTCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179783510 193 - 180051392 ctcttcttggctctgattctctctcccctcctatccctctctgtctcTTCTGCCACCA--GAGAGGAGATCCTCCATGTTCATCCTGGTGGATTCAAACCCatgtttgccacacagatagtcaccagaatcaataggtataatctataaagagtccttttgaaaaagaaaaaggcaggctggaca---tggtggctca i rheMac8.chr6 C 0 I 972 s cerAty1.NW_012009470v1 517968 193 - 16742782 CTCCTCTTGGCTCTGATTCTCCCTCCCCTCCTATCCCTTTCTGTCTCTTCTGCCACCA--GAGAGGAGATCCTCCATGTTCATCCTGGTGGATTCAAACCCatgcttgccacacagatagtcaccggaatgaataggtagaatctataaagagtccttttgaaaaagaaaaaggcaggctggaca---tggtggctca i cerAty1.NW_012009470v1 N 0 I 971 s chlSab2.chr4 1435969 193 + 91010382 ctcctcttggctctgattctccctcccctcctatccctttctgtctcTTCTGCCACCA--GAGAGGAGATCCTCCATGTTCATCCTGGTGGATTCAAACCCATGTTTGCCACACAGATAGTCACCGGAATGAATAGGTAtaatctataaagagtccttttgaaaaagaaaaaggcaggctggaca---tggtggctca i chlSab2.chr4 C 0 I 1704 s manLeu1.NW_012109696v1 23736 193 - 6207128 ctcctcttggctctgattctccctcccctcctatccctttctgtctcTTCTGCCACCA--GAGAGGAGATCCTCCATGTTCATCCTGGTGGATTCAAACCCATGCTTGCCACACAGGTAGTCACCGGAATGAATAGGTATAATCTATAAAGAGTCCTTTTGAAAAAGAAAAAGGCAggctggaca---tagtggctca i manLeu1.NW_012109696v1 C 0 I 4059 s colAng1.NW_012116910v1 835418 193 - 1687011 ctcctctcgtctctgattctcccttcccttctatccctttctgtctcTTCTGCCACCA--GAGAGGAGATCCTCCACGTGCATCCTGGTGGATTGAAACCTATCTTTGCCACACAGATAGTCACCGGAATGAACAGGTATAATCTATAAAGAGTCCTTTTGAAAAAGAAAAAGGCAggccaggca---tggtggctca i colAng1.NW_012116910v1 C 0 I 6 s calJac3.chr5 117213596 198 - 159171411 ctcctctcgcctctgattctccatgcccatctacccctctctgtctcttctcccaccacgcAGAGGAGATCCTGAAGGTTCATTCTAGTGGATTCAAACCCATCTTTGCCACACAGATAGTCACTAAAATGAATGGGCATCatctataaagagtcctcttgaaaaagaaaaaggcaggccaggcacggtggtggctca i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 14122 552 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=4194.000000 s hg38.chr3_KI270934v1_alt 138441 6 + 163458 TGCCTA s panTro5.chr3 2603040 6 - 202621043 TGCCTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204919160 6 + 205426864 tgccta i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 31353 6 + 880730 TGCCTA i gorGor5.CYUI01015759v1 C 0 C 0 s calJac3.chr5 117213794 6 - 159171411 tatctg i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 14122 552 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012116910v1 835611 6 - 1687011 I e manLeu1.NW_012109696v1 23929 4059 - 6207128 I e chlSab2.chr4 1436162 1704 + 91010382 I e cerAty1.NW_012009470v1 518161 971 - 16742782 I e rheMac8.chr6 179783703 972 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=548503.000000 s hg38.chr3_KI270934v1_alt 138447 1012 + 163458 TAACCCtgcagggaccag-ccccacagggtcggtgggtctctccctgtgtgcggcgacgagagagtgtagaaataaagacacaagacaaagagataagagaaagggcagctgggcccggggggccactaccaccaatgcgcggagaacggtagtgccccgaatgtctggctgcgctgttatttattggatacaaggcagaaggggcagggtaaagaatgtgagtcacctgcaatgataggtaaggtcacgtgggtcacgtgtccactggacagggggcccttccctgcctggcagccgaggcagagagggagaggagacagagagaaagacagcttatgccattatttccgcatatcagggactattagtatttttactaatttactactgctatctagaaggcagagccaggtgtacaggatgaaacatgaaggcggactaggagcgtgaccactgaagcacagcatcacagggagacggttaggcctccggataactgcaggcgagcctgactgatgtcaggccctccacaagaggtggaggagcagagtcttctctaaactcccccggggaaagggagacccccccccc-tcc-ccgccctttcccggtctgctaagtatcgggtgttgttccttgacaccttttgct--------------atccgcctggtaacaggcatcttcccagacgctggcatcaccgctagaccaaggagccctctggtggcccggtccgggcataacagaaggctcgcactcttgtcttctggtcacacctcact-atgtcccctcagctcctatctctgtatggcctggtttttcctaggctacgattatagagcaaggattatcataatattggaataaaaagtaattgctacaaactaatgattaatgatattcatatataatcatatctaagatctatatctggtataactattcttgttttatattttattatactggaacagctcgtgtcctctgtctcttgcctcggtgcctgggtggcttgccacccaca s panTro5.chr3 2603046 1015 - 202621043 TAACCCtgcagggaccag-ccccacagggtcggtgggtctctccctgtgtgcggcgacgagagagtgtagaaataaagacacaagacaaagagataagagaaagggcagctgggcccggggaaccactaccactaatgcgcggagaacggtagtgccccgaatgtctggctgcgctgttatttattggatacaaggcagaaggggcagggtaaagaatgtgagtcacctccaatgataagtaaggtcacgtgggtcacgtgtccactggacagggggcccttccctgcctggcagccgaggcagagagggagaggagacagagagaaagacagcttatgccattatttccgcatatcagggactattagtatttttactaatttactactgttatctagaaggcagagccaggtgtacaggatgaaacatgaaggcggactaggagcgtgaccactgaagcacagcatcacagggagacggttacgcctccggataactgcaggtgagcctgcctgatgtcaggccctccacaagaggtggaggagcagagtcttctctaaactcccccggggaaagggagaccccccccccctcctccgccctttcccggtctgctaagtatcgggtgttgttccttgacaccttttgct--------------atccgcctggtaacaggcatcttcccagatgctggcatcaccgctagaccaaggagccctctggtggcccggtccgggcacaacagaaggctcgcactcttgtcttctggtcacacctcacttatgtcccctcagctcctatctctgtatggcctggtttttcctaggctatgattatagagcaaggattatcataatattggaataaaaagtaattgctacaaactaatgattaatgatattcatatgtaatcatatctaagatctatatctggtataactattcttgttttatattttattatactggaacagctcgtgtcctctgtctcttgcctcggtgcctgggtggcttgccacccaca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204919166 1020 + 205426864 taaccctgcagggaccaa-ccccacagggtcggtgggtctctccctgtgtgcggcgacgagagagtgtagaaataaagacacaagacaaagagataagagaaagggcagctgggcccgggggaccactaccaccaatgcgcggagaccggtagtgccccgaatgtctcgctgcgctgttatttattggatacaaggcagaaggggcagggtaaagaatgtgagtcacctccaatgataggtaaggtcacgtgggtcacgtgtccactggacagggggcccttccctgcctggcagccgaggcagagagggagaggagacagagagaaagacagcttatgccattatttccgcatatcagggactattagtatttttactaatttactactgctatctagaaggcagagccaggtgtacaggatgaaacatgaaggcggactaggagtgtgaccactgaagcacagcatcacagggagacggttaggcctccagataactgcaggtgagcctgactgatgtcaggccctccacaagaggtggaggagcagagtcttctctaaactcccctggggaaagaaagacaccccc--------ccaccctttcccagtctgctaagtattgggtgttgttccttgacaccttttgctaccgctggaccacgatctgcctggtaacgggcgtcttcccagacgctggcatcaccgctagaccaaggagccctctggtggcccggtccgggcataacagaaggctcgcactcttgtcttctggtcacacctcact-atgtcccctcagctcctatctctgtatggcctggtttctcctaggctatgattatagagcgaggattatcataatattggaataaaaagtaattgctacaaactaatgattaatgatattcatatataatcatatctaagatctatatctggcataactattcttgttttatattttattatactggaacagctcgtgtcctctgtctcttgcctcggtgcctgggtggcttgccacccgca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 31359 1024 + 880730 TAACCCtgcagggaccagaccccacagggtcggtgggtctctccctgtgtgcggcgacgagagagtgtagaaataaagacacaagacaaagagataagagaaagggcagctgggcctggggaaccactaccaccaatgcgcgga-accggtagtgccccgaatgtctggctgcgctgttatttattggatacaaggcagaagggacagggtaaagaatgtgagtcacctccaatgataggtaaggtcacgtgggtcacgtgtccactggacagggggcccttccctgcctggcagccaaggcagagagggagaggagacagagagaaagacagcttatgccattatttctgcatatcagggactattagtatttttactaatttaccactgctgtctagaaggcagagccaggtgtacacgatgaaacatgaaggcggactaggagtgtgaccactgaagcacagcatcacagagagacggttaggcctccggataactgcaggcgagcctgactgatgtcaggccctccacaagaggtggaggagcagagtcttctctaaactcccccggggaaagggagaccccccccccc----ccgccctttcccggtctgctaagtatcgggtgttgttcctcgacaccttttgctaccgctggaccacgatccgcctggtaacgggcgtcttcccagatgctggcatcaccgctagaccaaggagccctctggtggcccggtccgggcataacagaaggctcgcactcttgtcttctggtcacacctcact-atgtcccctcagctcctatctctgtatggcctggtttttcctaggctatgattatagagcaaggattatcataatattggaataaaaagtaattgctacaaactaatgattaatgatattcatatataatcatatctaagatctatatctggtataactattcttcttttatattttattatactggaacagctcgtgtcctctgtctcttgcctcggtgcctgggtggcttgccacccaca i gorGor5.CYUI01015759v1 C 0 C 0 e macNem1.NW_012013899v1 14122 552 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117213800 0 - 159171411 C e colAng1.NW_012116910v1 835611 6 - 1687011 I e manLeu1.NW_012109696v1 23929 4059 - 6207128 I e chlSab2.chr4 1436162 1704 + 91010382 I e cerAty1.NW_012009470v1 518161 971 - 16742782 I e rheMac8.chr6 179783703 972 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=141051.000000 s hg38.chr3_KI270934v1_alt 139459 127 + 163458 taatcccagcactttgggaggctgaggtgggagaatcacctgaggtcaggagtttcagaccagcctggacaacatggtgaaaccccatctgtagtaaacatataaaaattagttgggcgtggtggtg s panTro5.chr3 2604061 127 - 202621043 taatcccagcactttgggaggctgaggtgggagaatcacctgaggtcaggagtttcagaccagcctggacaacatggtgaaaccccatctgtagtaaacatataaaaattagctgggcgtggtggtg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204920186 125 + 205426864 taatcccagcattttgggaggctgaggggggagaatcacctgaggtcaggagtttcagaccagcctggaaaacatggtgaaaccccatctgtagt-aacatat-aaaattagctgggcgtggtggtg i panPan2.chr3 C 0 I 23 s gorGor5.CYUI01015759v1 32383 127 + 880730 taatcccagcactttgggaggctgaggtgggagaatcacctgaggtcaggagtttcagaccagcctggacaacatggtgaaaccccatctgtagtaaacatataaaaattagctgggcgtggtggtg i gorGor5.CYUI01015759v1 C 0 C 0 s colAng1.NW_012116910v1 835617 127 - 1687011 taatcccagcactttgggaggctgaggcaggagaatcacctgaggtcaggagtttcagaccagcctggacaacatggtagaaccccatctctagtaaaaatacaaacattagctgggtgttatggtg i colAng1.NW_012116910v1 I 6 C 0 s calJac3.chr5 117213800 118 - 159171411 taatccaagcactttgggaagccaaggcaggcaggtcacctgaggtcaagg---------cagcctggtcaacatggtgaaatcccgtctctactaaacatacaaaaaatagctggacatggtggca i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 14122 552 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e manLeu1.NW_012109696v1 23929 4059 - 6207128 I e chlSab2.chr4 1436162 1704 + 91010382 I e cerAty1.NW_012009470v1 518161 971 - 16742782 I e rheMac8.chr6 179783703 972 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=219459.000000 s hg38.chr3_KI270934v1_alt 139586 298 + 163458 cgtgcctgtaatcccagccacttgggaggctgaggcaggagaatcatttgaacccagaagatggaggttgcagtgagctgagatcgcgccactgcactccagcctgggtggcagagtgatatt--gtctcaaaaaCATAGTAATAGGAATAATAAAGGAAAAGTGCaaaaattcaaacaacttaacagaaactgggcaaaagagctgaaccggccctccacagaagaggaaatgtggaggaatggctaatgaaaacatgaagaggggctcagcctaacagggggagatatcacgtgacaa s panTro5.chr3 2604188 298 - 202621043 cgtgcctgtaatcccagccacttgggaggctgaggcaggagaatcatttgaacccagaagatggaggttgcagtgagctgagatcgcgccactgcactccaacctgggtggcagagtgagactctgtctcaaaaaCATAATAATAGGAAtaataaaggaaaagtgcaaaaattcaaacaacttaacagaaactgggcaaaagagctgaaccggccctccacagaagaggaaatgtggaggaatggctaatgaaaacatgaagaggggctcagcataac--ggggagatatcacgtgacac i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 32510 299 + 880730 tgtgcctgtaatcccagccacttgggaggctgaggcaggagaatcatttgaa-ccagaagatggaggttgcagtgagctgagatcgcgccactgcactccagcctgggtgacagagtgatattctgtctcaaaaacatagtaataggaataataaagaaaaaGTGCaaaaattcaaacaacttaacagaaactgggcaaaagagctgaaccggccctccacagaagaggaaatgtggaggaatggctaatgaaaacatgaagaggggctcagcctaacagggggagatatcacgtgacac i gorGor5.CYUI01015759v1 C 0 C 0 s colAng1.NW_012116910v1 835744 297 - 1687011 tgcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccagaaggtggaggttgcagtgagctgagatcacgccactgcactccagtctgggtgacagagtgagactctgtctcaaaaacataataattggaataataaaagaaaaGTGCaaaaattcaaacaacttaacagaaactgtgcaaaagagctgaa-cggcccttcacagaagaggagatgtggaggaacggctaatgaaaacacaaagaggggctcagcccaatagggggagatatcgtgaaac-- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 117213918 282 - 159171411 catgcctttaatcccagcaactctggaagctaaggcaggagaatcgcttgaacccggaagatggaggtggcagtgagccaagatcgtaccactgtactccagcctgggtgacagagggcaactccatctcaaata-ataataataag-----------------gcaaaaattcagacaactaaacagaatctgggcaaaagagttgaaccagcccttcacagaagaggaaatgtgaagaaaagaccaataaaaacatgaagagggcctcagcctaacaggatgaagtatcacgtgacac i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 14122 552 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e manLeu1.NW_012109696v1 23929 4059 - 6207128 I e chlSab2.chr4 1436162 1704 + 91010382 I e cerAty1.NW_012009470v1 518161 971 - 16742782 I e rheMac8.chr6 179783703 972 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panPan2.chr3 204920311 23 + 205426864 I a score=387114.000000 s hg38.chr3_KI270934v1_alt 139884 349 + 163458 ccaccagacgggcaaaaa--------tcccacaacccaatccatgccagcgttggggagaatggagagaagcaggaacac-caggcactgct---aacgcttgtgaagta------------tatttctgctatgcttgtatatgaaagtgtgtgtgttgtgggttatgaggaaaattacattt-ttacctgggatgaaattttaaaattt-gaaagctactgaccagaagaaacttgcgcttgtgtacaaaagaaatgcccaagaacgttcccaacaaaacacagtcctaagggccccaacctggccaaacactcatccacgggaagatgaagacatttcccatgctcccctcagacgacgggagaccatgcag s panTro5.chr3 2604486 349 - 202621043 ccaccagacgggcaaaaa--------tcccacaacccaatccatgccagcgttggggacaatggagagaagcaggaacac-caggcactgct---aatgcttgtgaagta------------tatttctgctatgcttgtatatgaaagagtgtgtgttgtgggttatgaggaaaattacattt-ttacctgggatgaaattttaaaactt-gaaagctactgaccagaagaaacttgcgcttgtgtacaaaagaaatgcccgagaacgttcccaacaaaacacagtcctaagggccccaacctggccaaacgctcatccacgggaagatgaagacatttcccatgctcccctcagacgacgggagaccatgcag i panTro5.chr3 C 0 C 0 s panPan2.chr3 204920334 353 + 205426864 CCACCAGACGGGCAAAAAATC-----CCCAACAACCCAATCCATGCAGGTGTTGGGGAGAATGGAGAGAAGCAGGAACAC-CAGGCACTGCT---AACGCTTGTGAAGTA------------TATTTCTGCTATGCTTGTATATGAAAGAGTGTGTGTTGTGGGTTATGAGGAAAATTACATTT-TTACCTGGGATGAAATTTTAAAACTTGGAAAGCTACTGAccagaagaaacttgcgcttgtgtacaaaagaaatgcccaagaacgttcccaacaaaacacagtcctaagggccccaacctggccaaacgctcatccacgggaagatgaagacatttcccatgctcccctcagacgacgggagaccatgcag i panPan2.chr3 I 23 C 0 s gorGor5.CYUI01015759v1 32809 357 + 880730 ccaccagacgggcaaaaatcccacaaccccacaacccaatccatgccagcgttggggagaatggagagaagcaggaacac-caggcactgct---AACGCTTGTGAAGTA------------TATTTCTGCTATGCTTGTATATGAAAGAGTGTGTGTTGTGGGTTATGAGGAAAATTACATTT-TTACCTGGGATGAAATTTTAAAACTT-GAAAGCTACTGACCAGAAGAAACTTGCGCTTGTGTACAAAAGAAACGCCCAAGAACGTTCCCAACAAAACACAGTCCTAAGGGCCCCAACCTGGCCAAACACTCATCCACGGGAAGATGAAGACATTTCCCATGCTCCCCTCAGACGACGGGAGACCGTGCAG i gorGor5.CYUI01015759v1 C 0 C 0 s colAng1.NW_012116910v1 836041 352 - 1687011 ccgccagactagcagaaa--------tcccacaacccaatcaatgccagtgttggggagaatggagagtagcaggaacac-caggcactgctaagaatgtttatgaaata------------tatttttgttatgcttgtatatgaaagggtgtgtgttgtaggttatgatgaaaattacatttcttacctgggatgaaattttaaaactt-gaaagctactgacccaaagaaacttgcacttgtgta-aaaagaaatgcacaagaacgttcctagcaaaacacagtcctaagggccccaacctggtcaaacactcacccacagggaaatgaagacatttcccgtgctcccctcagatgacgggagatcacgcag i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 117214200 353 - 159171411 ccaccagactggcaaaaa--------tcccacagcccaataaatgcaagtgttggggagagtggagagcaacaagaacactcagccactaat---aaaaattttttatcactgataacaaattttttttgttatacttgcatatgaaatggtgtgtgtt----gttatgaggaaaatcacatttcttacctgggatgaaattttaaaaagt-gaaagctactcaccaaaagaaactggcacttgtgtacaaaa-aaatgccctagaatatt-ctagc--aacacagtcctaaggaccccaacctggacaaaca-tcatcaacaggaaaatgaagacactt-ccatgtccccctcataccatgggagattacgcag i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 14122 552 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e manLeu1.NW_012109696v1 23929 4059 - 6207128 I e chlSab2.chr4 1436162 1704 + 91010382 I e cerAty1.NW_012009470v1 518161 971 - 16742782 I e rheMac8.chr6 179783703 972 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=131762.000000 s hg38.chr3_KI270934v1_alt 140233 37 + 163458 caatgaaaatgagccatgtcagtgtgggtgggtctca s panTro5.chr3 2604835 37 - 202621043 caatgaaaatgagcCATGTCAGTGTGGGTGGGTCTCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204920687 37 + 205426864 caatgaaaatgaGCCATGTCAGTGTGGGTGGGTCTCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 33166 37 + 880730 CAATGAAACTGAGCCATGTCAGTGTGGGTGGGTCTCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179784675 37 - 180051392 CAATGAAAATGAACCACATCAGTGTGGGTGGGTCTCA i rheMac8.chr6 I 972 C 0 s cerAty1.NW_012009470v1 519132 37 - 16742782 CAATGACAATGAACCACGTCAGTGTGGGTGGGTCTCA i cerAty1.NW_012009470v1 I 971 C 0 s chlSab2.chr4 1437866 37 + 91010382 CAATGAAAATGAACCACATCAGTGTGGGTAGGTCTCA i chlSab2.chr4 I 1704 C 0 s manLeu1.NW_012109696v1 27988 36 - 6207128 CAATGAAAATGAACCACATCAGTGTGGGTGGGTCTC- i manLeu1.NW_012109696v1 I 4059 C 0 s colAng1.NW_012116910v1 836393 37 - 1687011 caatgaaaatgaaccacgtcagcgtgggtgggtctca i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 117214553 37 - 159171411 cagtgaaaatgaataacgtcaatgtggatgggtctcg i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 14122 552 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=836778.000000 s hg38.chr3_KI270934v1_alt 140270 191 + 163458 gggagagaatggaggacaaaaatagacacagagcaggtgctcagagcca-tgcagtgcaggagcagccacgcaggagaattccctcacgtcaaagttcaaaactacagccgaggcaacagagcaagaccctgcct-caaaaagaaaacagaaagttcaaaaactaaatggcatatcttttagggatgtacaca s panTro5.chr3 2604872 191 - 202621043 GGGAGAGAATGGAGGACAAAAATAGTCATAGAGCAGATGCTCAGAGCCA-TGCAGTGCAGGAGCAGCCACGCAGGAGAATTTCCTCACGTCAAAGTTCAAAactacagccgaggcaacagagcaagaccctgcct-caaaaagaaaacagaaaGTTCAaaaactaaatggcatatcttttagggatgtacaca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204920724 192 + 205426864 GGGAGAGAATGGAGGACAAAAATAGACACAGAGCAGATGCTCAGAGCCA-TGCAGTGCAGGAGCAGCCACGCAGGAGAATTTCCTCACGTCAAAGTTCAAAACTACAGCCGAGGCAACAGAGCAAGACCCTGCCTACAAAAAGAAAACAGaaagttcaaaaactaaatggcttattttttagggatgtacaca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 33203 189 + 880730 GGGAGAGAATGGAGGACGAAAATAGACACAGAGCAGATGCTCAGAGCCA-TGCAGTGCAGGAGCAGCCACGCAGGAGAACTTCCTCACGTCAAAGTTCAAAactacagccgaggcaacagagcaagaccctgcct-caaaaagaaaac--aaaGTTCAaaaactaaatggcatattttttagggatgtacgca i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179784712 190 - 180051392 GGGGGAGAATGGAAGACAAAGACAGACATTGAGCAGATGCTCAGAGCCA-TGCAGCATAGGAGCAGCCACGCAGGAGAATTTCCTCACATCAAAGTTCAAAactacagccgaggcaacagagcaagaccctgcct-caaaaagaaaacagaaaGTTCAaaaactaaatggcatatttttt-gggatgtacaca i rheMac8.chr6 C 0 I 2 s macNem1.NW_012013899v1 14674 190 + 100774 GGGGGAGAATGGAAGACAAAAACAGACATTGAGCAGATGCTCAGAGCCA-TGCAGCATAGGAGCAGCCACGCAGGAGAATTTCCTCACATCAAAGTTCAAAactacagccgaggcaacagagcaagaccctgcct-caaaaagaaaacagaaaGTTCAaaaactaaatggcatattttgg-gggatgtacaca i macNem1.NW_012013899v1 M 552 I 2 s cerAty1.NW_012009470v1 519169 190 - 16742782 GGGGGAGAACTGAAGACAAAAACAGACATTGAGCAGATGCTCAGAGCCA-TGCAGCGTAGGAGCAGCCACACAGAAGAATTTCCTCACATCAAAGTTCAAAactacagccgaggcaacagagcaagaccctgcct-ctaaaagaaaacagaaaGTTCAaaaactaaatggcatatttttt-gggatgtacaca i cerAty1.NW_012009470v1 C 0 I 2 s chlSab2.chr4 1437903 186 + 91010382 GGGGGAGAATGGAAGACAAAAACAGACATTGAGCAGATGCTTAGAGCCA-TGCAGTGCAGGAGCAGCCACACAGGAGAATTTCCTCACATCAAAGTTCAAAactacagccgaggcaacagagcaagaccctgcct-caaaaagaaaaT----AGTTCAaaaactaaatggcatatttttt-gggatgtacaca i chlSab2.chr4 C 0 I 5089 s manLeu1.NW_012109696v1 28024 190 - 6207128 GGGGGAGAATCGAAGACAAAAACAGACATTGAGCAGATGCTCAGAGCCA-TGCAGCGTAGGAGCAGCCACACAGGAGAATTTCCTCACATCAAAGTTCAAAactacagccgaggcaacagagcaagaccctgcct-ctaaaagaaaacagaaaGTTCAaaaactaaatggcatatttttt-gggatgtacaca i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 836430 186 - 1687011 gggggagaatggaagacaaaaacagacattgagcagatgctcagagcca-tgcagcgcaggagcagccacacaggagaatttcctcacatcaaagttcaaaactatagccgaggcaacagagcaagaccctgcct-caaaaagaaaac----agttcaaaaaccaaatgtcgtatttttt-aggatgtacaca i colAng1.NW_012116910v1 C 0 I 2 s calJac3.chr5 117214590 191 - 159171411 ggaagagaatggaggacaagaatagacatggagcagatgctcagacccagtgcagcctaggagcagccacacaggagaatttctccacatcggagttcaaaactatggccgcagcagcagagcaagaccctgtct-caaaaag-acacagaaacttcaaaaactaaatggcatattgtttagggataaacatg i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=3955.000000 s hg38.chr3_KI270934v1_alt 140461 2 + 163458 ca s panTro5.chr3 2605063 2 - 202621043 ca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204920916 2 + 205426864 ca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 33392 2 + 880730 ca i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179784904 2 - 180051392 cg i rheMac8.chr6 I 2 C 0 s macNem1.NW_012013899v1 14866 2 + 100774 cg i macNem1.NW_012013899v1 I 2 C 0 s cerAty1.NW_012009470v1 519361 2 - 16742782 ca i cerAty1.NW_012009470v1 I 2 C 0 s manLeu1.NW_012109696v1 28214 2 - 6207128 ta i manLeu1.NW_012109696v1 C 0 I 2 s colAng1.NW_012116910v1 836618 2 - 1687011 cg i colAng1.NW_012116910v1 I 2 C 0 s calJac3.chr5 117214781 2 - 159171411 ta i calJac3.chr5 C 0 I 2 e saiBol1.JH378155 16319759 48915 + 16417988 T e chlSab2.chr4 1438089 5089 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=2572095.000000 s hg38.chr3_KI270934v1_alt 140463 611 + 163458 cggtgaaagaaacatactatgaaggaaagtgtgcaaataataaagactaaagcaggaagtgattccctccgtaggagaagggaagggactgggactcaggcagggcctccagggag-catccaaagctatgtctcttcagattctactccctaaacttggtggaggtcctctgtgtccaatgtgtcaatattctttataccttacccatactgtaaaaacgctttatttctattcaatatttagaagacagttataaACAAGA-----TGCATTCAATAGCATGGTGGCAGATGAACATCAGGAAGGAACATCCATGAG---------CTTCCATCCACGGAACCTCACCATGGATACGCTTGTGATCAAGGGCCTGGTCTCCCCTCAAGACAC-----GGTCACAGATCAGAGGCCACAC-CATCCTAGCAGTGGAGCAGGACCAGCTGGGACAGGGTCCTTCTGTGACACCTGCTGCATCACCAGGCTGGGTGAACGGACACAATTGCCAGAACTCACAGAATAGAAGTATCAGCACCGAAACCTCACAGGAAAAATGGTAAGTTCTAAGTTTCTCCATTAATAGTAACTCTCAGATTAATCTCTGTCATCCATCGCTTCTCCAAGAAAT s panTro5.chr3 2605065 606 - 202621043 cggtgaaagaaacatactatgaaggaaagtgtgcaaataataaagacgaaagcaggaagtgattccctccgtag---aagggaagggactgggactcaggcagggcctccagggag-catccaaagttatgtctcttcagattctactccctaaacttggtgcaggtcctctgtgtccaatgtgtcaatattctttat--cttacccatactgtacaaatgctttatttctatTCAATATGTAGAAGACAGTTATAAACAAGA-----TGCATTCAATAGCAAGGTGGCAGATGAACATCAGGAAGGAACATTCATGAG---------CTTCCATCCACGGAACCTCACCATGGATACGCTTGTGATCAAGGGCCTGGTCTCCCCTCAAGACAC-----AGTCACAGATCAGAGGCCACAC-CATCCTAGCAGTGGAGCAGGACCAGCTGGGACAGGGTCCTTCTGTGACACCTGCTGCATCACCAGGCTGGGTGAATGGACACAATTGCCAGAACTCACAGAATAGAAGTATCAGCACCGAAACCTCACAGGAAAAATGGTAAGTTCTAAGTTTCTCCGTTAATTGTAACTCTCAGATTAATCTCTGTCATCCATAGCTTCTCCAAGAAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204920918 609 + 205426864 cggtgaaagaaacgtactatgaaggaaagtgtgcaaataataaagacgaaagcaggaagtgattccctccgtaggagaagggaagggactgggactcaggcagggcctccagggag-catccaaagttatgtctcttcagattctactccctaaacttggtgcaggtcctctgtgtccaatgtgtcaatattctttat--cttacccatactgtacaaatgctttatttctatTCAATATGTAGAAGACAGTTGTAAACAAGA-----TGCATTCAATAGCAAGGTGGCAGATGAACATCAGGAAGGAACATTCATGAG---------CTTCCATCCACGGAACCTCACCATGGATACGCTTGTGATCAAGGGCCTGGTCTCCCCTCAAGACAC-----GGTCACAGATCAGAGGCCACAC-CATCCTAGCAGTGGAGCAGGACCAGCTGGGACAGGGTCCTTCTGTGACACCTGCTGCATCACCAGGCTGGGTGAACGGACACAATTGCCAGAACTCACAGAATAGCAGTATCAGCACCGAAACCTCACAGGAAAAATGGTAAGTTCTAAGTTTCTCCATTAATTGTAACTCTCAGATTAATCTCTGTCATCCGTTGCTTCTCCAAGAAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 33394 609 + 880730 cggtgaaagaaacgtactatgaaggaaagtgtgcaaataataaagactaaagcaggaagtgattccctccgtaggagaagggaagggactgggacccaggcagggcctccagggag-catccaaagttatgtctcttcagattctactccctaaacttggtggaggtcctctgtgtccaatgtgtcaatattctttataccttacccatactgtacaaatgctttatttctattcaatatttagaagacagttataaACAAGA-----TGCATTCAATAGCAAGGTGGCAGATGAACATCAGGAAGGAACATCCATGAG---------CTTCCATCCACAGAACCTCACCATGGATACGCTTGTGATCAAGGGCCTGGTCTCCCCTCAAGACAC-----AGTCACAGATCAGAGGCCACAC-CATCATAGCAGTGGAGCAGGACCAGCTGGGACAGGGTCCTTCTGTGACACCTGCTGCATCACCAGGCTGGATGAACGGACTCAATTGACAGAACTCACAGAATAGCAGTGTCAGCACCGAAACCTCACAGGAAAAATGGTAAGTTCTAAGTTTCTCCATTAATAGTAACTCTCAGATTAA--TCTGTCATCCATCGCTTCTCCAAGAAAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179784906 600 - 180051392 cggtgaaagaaacgtactgtgaagaaaagtacgggaacaataaagactaaagcaggaagtgattccctctgtagaagaagggaagggactgggactcaggcagggcctccagggaa-catctgaagttacgtctcttcagattc-attccctaaacttggtggaggtcctctgtgtccaatgggtcgatgttctttatattttacccatattgtaccaatgctttatttctattcaatatttagaagacagttataaACAAGA-----TGCATTAAATAGCAAGATGGCCGATGAACATCAGGAAAGAACATCCATGAG---------GTTCCATCCACAGAACCTCACCATGGATACGCTTGTGATCAAAGGCCTGGTCTCCCCTCACGACAC-----------AGAGCAGAGGCCGCAC-CATCAT---AGTGGAGCAGGAGCAGCTGGGACAGGGCCCTTCTGTGA-ACCTGCTGCATCGCCAGGCTGTGCAAACGGACTCAGCGGCCAGAACTCACAGAGTATCAGTATCAGCACCGAAACCTCACAGGAAAAACGGTAAGTTCTAAGTTTCTCCATTAATAGTAACTCTCAGATTAATCTCTGTCATCCATCGCTTCTCCAAGAAAT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 14868 600 + 100774 cggtgaaagaaacgtactgtgaaaaaaagtatgggaacaataaagactaaagcaggaagtgattccctctgtaggagaaggggagggactgggactcaggcagggcctccagggaa-catctgaagttatgtctcttcagattc-attccctaaacttggtggaggtcctctgtgtccaatgtgtcgatattctttatattttacccatactgtaccaacgctttatttctattcaatatttagaagacagttataaACAAGA-----TGCATTAAATAGCAAGATGGCCGATGAACATCAGGAAGGAACATCCATGAG---------GTTCCATCCACAGAACCTCACCATGGATACGCTTGTGATCAAAGGCCTGGTCTCCCCTCACGACAC-----------AGAGCAGAGGCTGCAC-CATCAT---AGTGGAGCAGGAGCAGCTGGGACAGGGCCCTTCTGTGA-ACCTGCTGCATCGCCAGGCTGTGCAAACGGACTCAGCGGCCAGAACTCACAGAGTATCAGTATCAGCACCGAAACCTCACAGGAAAAATGGTAAGTTCTAAGTTTCTCCATTAATAGTAACTCTCAGATTAATCTCTGTCATCCATCGCTTCTCCAAGAAAT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 519363 601 - 16742782 cggtaaaagaaacgtactgtgaagaaaagtacgggaacaataaagattaaagcaggaagtgattccctctgtaggagaagggaagggactgggactcaggcagggcctccagggaa-catctgaagttatctctcttcagattctattccctaaacttggtggaggtcctctgtgtccaatgtgtcgatattctttatattttacccatactgtaccaatgctttatttctattcaatatttagaagacagttataaACAAGA-----TGCATTAAATAGCAAGATGGCCGATGAACATCAGGAAGGAACATCCATGAG---------GTTCCATCCACAGAACCTCACCATGGATACGCTTGTGATCAAAGGCCTGGTCTCCCCTCACGACAC-----------AGAGCAGAGGCCGCGC-CATCAT---AGTGGAGCAGGAGCAGCTGGGACAGGGCCCTTCTGTGA-ACCTGCTGCATCCGCAGGCTGTGCAAACGGACTCAGCGGCCAGAACTCACAGAGTATCAGTATCAGCACCGAAACCTCACAGGAAAAATGGTAAGTTCTAAGTTTCTCCATTAATAGTAACTCTCAGATTAATCTCTGTCATCCATCGCTTCTCCAAGAAAT i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1443178 601 + 91010382 cggtgaaagaaacatactgtgaagaaaagtacgggaacaataaagattaaagcaggaagtgattccctctgtagaagaagggaagggactgggactcaggcagggcctccagggaa-tatctgaagttatgtctcttcagattctattccctaaacttggtggaggtcctctgtgtccaatgtgtcgatattctttatattttacccatattgtaccaatgctttatttctattcaatatttAGAAGACAGTTATAAACAAGA-----TGCATTAAATAGCAAGATGGCCGATGAACATCAGGAAGGAACATCCATGAG---------GTTCCATCCACAGAACCTCACCATGGATACGCTTGTGATCAAAGGCCTGGTCTCCCCTCACGACAC-----------AGAGCAGAGGCCGCAC-CATCAT---ACTGGAGCAGGAGCAGCTGGGACAGGGCCCTTCTGTGA-ACCTGCTGCATCGCCAGGCTGTGCAAACGGACCCAGCGGCCAGAACTCACACAGTATCAGTATCAGCACCGAAACCTCACAGGAAAAATGGTAAGTTCTAAGTTTCTCCATTAATAGTAACTCTCAGATTAATCTCTGTCATCCATCGCTTCTCCAAGAAAT i chlSab2.chr4 I 5089 I 1308 s manLeu1.NW_012109696v1 28218 601 - 6207128 cggtaaaagaaacgtactgtgaagaaaagtatgggaacaataaagattaaagcaggaagtgattccctctgtaggagaagggaagggactaggactcaggcagggcctccagggaa-catctgaagttatctctcttcagattctattccctaaacttggtggaggtcctctgtgtccaatgtgttgatattctttatattttaccaatattgtgccaatgctttatttctattcaatatttagaagacagttataaACAAGA-----TGCATTAAATAGCAAGATGGCCGATGAACATCAGGAAGGAACATCCATGAG---------GTTCCATCCACAGAACCTCACCATGGATACGCTTGTGATCAAAGGCCTGGTCTCCCCTAACGACAC-----------AGAGCAGAGGCCACAC-CATCAT---AGTGGAGCAGGAGCAGCTGGGACAGGGCCCTTCTGTGA-ACCTGCTGCATCGCCAGGCTGTGCAAACGGACTCAGCGGCCAGAACTCACAGAGTATCAGTATCAGCACCGAAACCTCACAGGAAAAATGGTAAGTTCTAAGTTTCTCCATTAATAGTAACTCTCAGATTAATCTCTGTCATCCATCGCTTCTCCAAGAAAT i manLeu1.NW_012109696v1 I 2 C 0 s colAng1.NW_012116910v1 836620 603 - 1687011 cggtgaaagaaacatactgtgaagaaaagtatgggaacaataaagactaaagcaagaagtgattccctctgtaggagaagggaagggactgggactcaggcagggcctccagggaa-catctgaagtcatgtctcttcagattctattccctaaacttggtggaggtcctctgtgtcccatgtgtcgatattctttatattttacccatattgtaccaatgctttatttgtatTCAATGTTTAGAAGACGGTCATAAACATTAAACATTGCATTAAATAGCAAGATGGCCGATGAACATCAGGAAGGAACATCCATGAG---------GTTCCATCCACAGAACCTCACCATGGATACGCTTGTGATCAAAGGCCTGGTCTCCCCTCACGACAC-----AG----AGAGCAGAGG-----C-CATCAT---AGTGGAGCAGGACCAGCTGGGACAGGGCCCTTCTGTGA-ACCTGCTGCATCGCCAGGCTGTGCGAACAGGCTTAATTGCCAGAACTCACACAATATCAGTATCAGCACCAAAACCTCACAGGAAAAATGGTAAGTTCTAAGTTTCTCCATTAATAGTAACTCCCAGATTAATCTCTGTCATCCATTGCTTCTCCAAGAAAT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 117214785 599 - 159171411 tggtgaaagaaataaactataaagaaaagtacaggaataagaaaggctaaa-cagaaagtgactccctctgtag---aagggaagggactgggactcaggaggggcctccagggaagcatccaaagttctgtctcttt-gtttttattccctaaacttggtagaggtcctatgct-------------tattctttatccctgacccatatggtacaaatgcttt-ttTCTACCCAGTCTTTAGAAGACAGTTATAAACAAGA-----TGCATT-AATTGCAAGATGGCGGATGAGCAT-AGGAAGGCACAT-CAGGAGCGTCCCTGTGCTCCATCCATGGAACCTCACCATGGACACCCTTGTGCTCATAGGCCTGGTCTCCTCTCAAGACAGTCAGTGGTCGGGGATCAGAGGCAGCACTCATCACAGCAGAGAGGCAGGACCAGCTGGGAGA-GGCCCTTCTGTAACACCTACTGCATCACCAGGCTGTGTGAACGGACTCAGCTGCCAGAACGCACAGAGTATCAT--TCCACACCGAAACCTCACGGG--AAATGGTAAGTTCTCAGTTTCTCCATCAATA-CAACTCTCAGATTAATCTCTGTCCTCCATCACTTCTCCATGAAAC i calJac3.chr5 I 2 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=26127.000000 s hg38.chr3_KI270934v1_alt 141074 7 + 163458 GACTTTT s panTro5.chr3 2605671 7 - 202621043 AACTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204921527 7 + 205426864 AACTTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 34003 7 + 880730 AACTTTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179785506 7 - 180051392 AACTTTT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 15468 7 + 100774 AACTTTT i macNem1.NW_012013899v1 C 0 I 2872 s cerAty1.NW_012009470v1 519964 7 - 16742782 AACTTTT i cerAty1.NW_012009470v1 C 0 C 0 s manLeu1.NW_012109696v1 28819 7 - 6207128 AACTTTT i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 837223 7 - 1687011 AACTTTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 117215384 7 - 159171411 AACGTTT i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e chlSab2.chr4 1443779 1308 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=6552.000000 s hg38.chr3_KI270934v1_alt 141081 2 + 163458 TA s panTro5.chr3 2605678 2 - 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204921534 2 + 205426864 TA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 34010 2 + 880730 TA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179785513 2 - 180051392 TA i rheMac8.chr6 C 0 I 1900 s cerAty1.NW_012009470v1 519971 2 - 16742782 TA i cerAty1.NW_012009470v1 C 0 I 24350 s manLeu1.NW_012109696v1 28826 2 - 6207128 TA i manLeu1.NW_012109696v1 C 0 I 28162 s colAng1.NW_012116910v1 837230 2 - 1687011 TA i colAng1.NW_012116910v1 C 0 I 5918 s calJac3.chr5 117215391 2 - 159171411 TA i calJac3.chr5 C 0 I 843 e macNem1.NW_012013899v1 15475 2872 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e chlSab2.chr4 1443779 1308 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1281597.000000 s hg38.chr3_KI270934v1_alt 141083 2525 + 163458 GGGTGATGTGCCAGGCGCCATGTTGGAGGGCTGGTGGTAGCGGCTTGGGGAGGTGCTCACTCTGTCGGTCTCACTCTCTCACACGCTTCCCC-GGCTCCCTTCGTTCCCCCCCACCCCACTTGGCCTGCGTGCTGGAGGGTGTGCGAGGGAGTGGGAGGACGTCGGGGGGTGGGGGGAGGCGTTCCGGTCCCCAAGAGACCCGCGGAGGGAGGCGGAGGCTGTGAGGGACTCCGGGAAGCCATGGACGTCGACAGGCTCCAGGAGGCGCTGGAAGATTTTGAGAAGAGGCA-AAAAAGAAAGTCTGTCCTGTCCTGGATCAGTTCCTTTTGTCATGTAGCCAAGACTGGAGAAACAGATTCCGTGGTCCCAATTTAAAGGCTATTTTATTTTCAAACTGGAGAAAGTGATGGATGATTTCAGAACTTCAGCTCCTGCGCCAAGAGGTCCTCCCAACCCTAATGTCGAATATATTCCCTGTGATGAAACAAAGGGAAGAATACTGAAAAACTGTCACTGGATTTAACCGTATCCCTTTTACTATTCAGCGATTATGTGAATTGTTAACAGATCCGAGGAGAAACTATACAGGAACAGAC-AAATTTCTCAGAGGAGTAGAAAAGAACGTGATGGTTGTTAGCTGTGTTTATCCTTCTTCAGAGAAAAACAATTCCAATAGTTTAAATCGAATGAATGGTGTGATGTTTCCTGGAAATGCACCAAGCTATACTGAGAGGTCTAATATAAATGGGCCTGGGACACCCAGGCCACGTAATCGACCAAAGGTTTCTCTGTCAGCCCCCATGACAACAAATGGGTGGCCTGAGAGCACAGACAGCAAAGAGGCAAATTTGCAGCAAAATGAAGAGAAAACTCA--GTGACTCTTCGACATCTGAATCAGAAGTTTCCTCAGTGAGCCCTTTGAGAAATAAACATCCAGATGAAGATGCTGTGGAAGCTGAGGGGCATGAGGTAAAAAGACTCAGGTTTGACAAAAAAGGCGAAGTCGGAGAAATAGCCAGTCAAGCGACTTGCAGCGAAATTTCTTCAGTTATGGTAGAAGAAACAGAAGCATCACCTTCATCTCATGATAAAGACAAAAAAAGCCATGGTACCCGGCAGCGCGTTCagaagaagatgaaga---tgaagaggaagaagaagGGATTGAGAGACCATCTGTAAAAGGGAGGAGTAAGGAGATCCTCAAATTCTTGCATTCATTGTTTTTGTGAAAGAATTGTACATCATGGAACTCCTTGTAATGTCGACGCTGGGCTTTTCTCCCACCTGTATGCAGTTGCTGCTGAATTTCAGGGGATGTGATTTGAACTACAGAACATCAGAATTCACGAAACTTAACTGTGGAGGTATTTTGAATATAAAATTTAAGTACAACAACATTTGCTTATTTTTAGAGTCTTTTATGACATCAAGAGAAATGGTCCCAGAAAGAAAAAACCAAGAAAAAGAATCTGATGATGCCTCAACTGTGAATGAAGAGACTTCTGAGGAAAATAATGAAATGGAGGAATCTGATGTGTCTCAAGCTGAGAAAGATTTACTACATTCTGAAGGTAGTGAAAACGAAGGCCCTGAAAGTAGTGGTTCTTCTGACTGCCGTGAAACAGAAGAATTAGTAGGATCCAATTCCAGTAAAACTGGAGAGATTCTTTCAGAATCATCCATGGATAATGATGACGAAGCCACAGAAGTCACCGATGAACCACTGGAACAAGACTATTTAGAAACATTTACATGCAGTATTTTACACACAGTTCTGGTTTTAACACTGTATAAAACTTTTATGTAAAAAAGTGCACCTTTAGTTTTATAAGAAAAGCAGGTTGTAAAATAAAGTACTTTATGGATAATTCCTGAAAGAGTTGTCCATGTAAGAACTGTGAATATCAGCTCCTCTGGGTCCTGCTTACCTTACCGCTGATTTCTTtttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttcttttctttctttctttctttctttGGTCTGGGCAAATCAGTGGTTTGTGTATAG-ATTTTTTTTTTTAATTTAGGATTAAAGTTTTTAAACTGGAAAGTAATTATAATTTTGAACAGTTTTTTGAGATTATCACATTTAGTTTATACATATGCAAGAAGCTTTTTGTCTTGTGTCTTTCTGATAGCTCCAGCAGTTTTCATATTTTGGTCATAGTTTCAACATTTTAACATGTGAATAATAGAGTTTCATGCTGGTTTCCAGATTTTATTGTTCGGATACATACAATAGAACCTTAAGTTTtatatatatatatatatatatatatatatatatatatatatatatatatatatTCTAAGGGGGAAAATGTTATATTTTTCTGTTTGTATAAGAGATAAATACAGTGGATACTTTTTCTATTGGTAATGACTGAGTTCACCTCTTTCAGAAGACATTTTCTTTCTCTTCTGAGTAACTGAAATAAAATCTGGCCTCTGTGAAACCCTGGAAAT s panTro5.chr3 2605680 2416 - 202621043 GGGTGACGTGCCAGGCGCCATGTTGGAGGGCTGGTGGTAGCGGCTTGGGGAGGTGCTCACTCTGTCGGTCTCACTCTCTCACACGCTTCCCCTGGCTCCCTTCGTTCCCCCCCACCCCACTTGGCCTGCGTGCTGGAGGGTGTGCGAGGGAGTGGGAGGATGTCAGGGGGTGGGGGGAGGCGTTCCGGTCCCCAAGAGACCCGCGGAGGGAGGCGGAGGCTGTGAGGGACTCCAGGAAGCCATGGACGTCGAGAGGCTCTAGGAGGCGCTGGAAGATTTTGAGAAGAGGGGGAAAAAGAAAGTCTGTCCTGTCCTGGATCAGTTTCTTT-GTCATGTAGTCAAGACTGGAGAAACAGATTCAGTGGTCCCAATTTAAAGGCTATTTTATTTTCAAACTGGAGAAAGTGATGGATGATTTCAGAACTTCAGCTCCTGCGCCAAGAGGTCCTCCCAACCCTAATGTCGAATATATTCCCTTTGATGAAACAAAGGAAAGAATACTGAAAA-CGGTCACTGGATTTAACCGTATCCCTTTTACTATTCAGTGATTATGTGAATTGTTAACAGATCCAAGGAGAAACTATACAGGAACAGAC-AAATTTCTCACAGGAGTAGAAAAGAACGTGATGGTTGTTAGCTGTGTTTATCCTTCTTCAGAGAAAAACAATTCCAATAGTTTAAATCGAATGAATGGTGTTATGTTTCCTGGAAATGCACCAAGCTATACTGAGAGGTCTAATATAAATGGGCCTGGGACACCCAGGCCACTTAATCGAC-AAAGGTTTCTTTGTCAGCCCCCATGACAACAAATGGGTGGCCTGAGAGCACAGACAGCAAAGAGGCAAATTTGCAGCAAAATGAAGAGAAAACTCACAGTGACTCTTCGACATCTGAATCAGAAGTTTCCTCAGTGAACCCTTTGAAAAATAAACATCCAGATGAAGATGCTGTGGAAGCTGAGGGGCATGAGGTAAAAAGACTCAGGTTTGACAAAAAAGGCAAAGTTGGAGAAACAGCCAGTCAAGCGACTTGCAGCGAAATTTCTTCAGTTATGGTAGAAGAAACAGAAGCATCACCTTCATCTCACGATAAAGAGAAAGAAAGCCGTGGTACCCGGCAGCGCGTTCagaagaggatgaagaagatgaagaggaagaagaagGGATTGAGAGACCATCTGTAAAAGGGAGGAGTAAGGAGATCCTCAAATTCTTGCATTCATTGTTTTCGTGAAAGAACTGTACATCATGGAACTCCTTGTAATGCCGACGCTGGGCTTTTCTCCCACctgtatgcagttgctgctgaatttcaggggatgtgatttgaactacagaacatcagaattcacgaaaCTTAACTGTGGAGGTATTTTGAATATAAAATTTAAGTACAACAACATTTGCTTATTTTTAGAGTCTTTTATGACATCAAGAGAAATGATCCCAGAAAGAAAAAACCAAGAAAAAGAATCTGATGATGCCTCAACTGTGAATGAAGAGACTTCTGAGGAAAATAATGAAATGGAGGAATCTGATGTGTCTCAAGCTGAGAAAGATTTATTACATTCTGAAGGTAGTGAAAACGAAGGCCCTGAAAGTAGTGGTTCTTCTGACTGCCGTGAAACAGAAGAATTAGTAGGATCCAATTCCAGTAAAACTGGAGAGATTCTTTCAGAATCATCCGTGGATAATGATGACGAAGCCACAGAAGTCACCGATGAACCACTGGAACAAGACTATTTAGAAACATTTACATGCAGTATTTTACACACAGTTCTGGTTTTAACACTGTATAAAACTTTTATGTAAAAAAGTGCACCTTTAGTTTTACAAGAAAAGCAGGTTGTAAAATAAAGTACTTTATGGATAATTCCTGAAAGAGTTGTCCATGTAAGAACTGTGAATATCAGCTCCTCTGGGTCCTGCTTACCTTACCGCTGATTTC---------------------------------------------------------------------------------TCTTTCTTTCTTTGGTCTGGGCAAATCAGTGGTTTGTATATAGTTTTTTTTTTTTTAATTTAGGATTAAAGTTTTTAAACTGGAAAGTAATTATAATTTTGAACAGTTTTTTGAGATTATCACATTTAGTTTACACATATGCAAGAAGCTTTTTGTCTTGTGTCTTTCTGATAGCTCCAGCAGTTTTCATATTTTGGTCATAGTTTCAACATTTTAACATGTGAATAATACAGTTTCATGCTGGTTTCCAGATTTTATTGTTCGGATACATACAATAGAACCTTAAGTTTtatatatatatatatat---------------------------------tatTCTAAGGGGGAAAATGTTATATTTTTCTGTTTGTATAAGAGATGAATACAGTGGATACTTTTTCTATTGGTAATGATTGAATTCACCTCTTTCAGAAGACATTTTCTTTCTCTTCTGAGTAACTGAAATAAAATCTGGCCTTTGTGAAACCCTGGAAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204921536 2441 + 205426864 GGGTGACGCGCCAGGCGCCATGTTGGAGGGCTGGTGGTAGCGGCTTGGGGAGGTGCTCACTCTGTCGGTCTCACTCTCTCACACGCTTCCCCTGGCTCCCTTCGTTCCCCCCCACCCCACTTGGCCTGCGTGCTGGAGGGTGTGCGAGGGAGTGGGAGGATGTCGGGGGGTGGGGGGAGGCGTTCCGGTCCCCAAGAGACCCGCGGAGGGAGGCGGAGGCTGTGAGGGACTCCGGGAAGCCATGGACGTCGAGAGGCTCCAGGAGGCGCTGGAAGATTTTGAGAAGAGGGGGAAAAAGAAAGTCTGTCCTGTCCTGGATCAGTTTCTTT-GTCATGTAGCCAAGACTGGAGAAACAGATTCCGTGGTCCCAATTTAAAGGCTATTTTATTTTCAAACTGGAGAAAGTGATGGATGATTTCAGAACTTCAGCTCCTGCGCCAAGAGGTCCTCCCAACCCTAATGTCGAATATATTCCCTTTGATGAAACAAAGGAAAGAATACTGAAAA-CGGTCACTGGATTTAACCGTATCCCTTTTACTATTCAGCGACTATGTGAATTGTTAACAGATCCAAGGAGAAACTATACAGGAACAGACAAAATTTCTCAGAGGAGTAGAAAAGAACGTGATGGTTGTTAGCTGTGTTTATCCTTCTTCAGAGAAAAACAATTCCAATAGTTTAAATCGAATGAATGGTGTTATGTTTCCTGGAAATGCACCAAGCTATACTGAGAGGTCTAATATAAATGGGCCTGGGACACCCAGGCCACTTAATCGACCAAAGGTTTCTCTGTCAGCCCCCATGACAACAAATGGGTGGCCTGAGAGCACAGACAGCAAAGAGGCAAATTTGCAGCAAAATGAAGAGAAAACTCACAGTGACTCTTCGACATCTGAATCAGAAGTTTCCTCAGTGAACCCTTTGAAAAATAAACATCCAGATGAAGATGCTGTGGAAGCTGAGGGGCATGAGGTAAAAAGACTCAGGTTTGACAAAAAAGGCAAAGTTGGAGAAACAGCCAGTCAAGCGACTTGCAGCGAAATTTCTTCAGTTATGGTAGAAGAAACAGAAGCATCACCTTCATCTCACGATAAAGACAAAGAAAGCCGTGGCACCCGGCAGCGTGTTCagaagaggatgaagaagatgaagaggaagaagaagGGATTGAGAGACCATCTGTAAAAGGGAGGAGTAATGAGATCCTCAAATTCTTGCATTCATTGTTTTCGTGAAAGAACTGTACATCATGGAACTCCTTGTAATGCCGACGCTGGGCTTTTCTCCCACctgtatgcagttgctgctgaatttcaggggatgtgatttgaactacagaacatcagaattcACGAAACTTAACTGTGGAGGTATTTTGAAAATAAAATTTAAGTACAACAACATTTGCTTATTTTTAGAGTCTTTTATGACATCAAGAGAAATGATCCCAGAAAGAAAAAACCAAGAAAAAGAATCTGATGATGCCTCAACTGTGAATGAAGAGACTTCTGAGGAAAATAATGAAATGGAGGAATCTGATGTGTCTCAAGCTGAGAAAGATTTACTACATTCTGAAGGTAGTGAAAACGAAGGCCCTGAAAGTAGTGGTTCTTCTGACTGCCGTGAAACAGAAGAATTAGTAGGATCCAATTCCAGTAAAACTGGAGAGATTCTTTCAGAATCATCCGTGGAAAATGATGACAAAGCCACAGAAGTCACCGGTGAACCAATGGAACAAGATTATTTAGAAACATTTACATGCAGTATTTTACACACAGTTCTGGTTTTAACACCATATAAAACTTTTATGTAAAAAAGTGCACCTTTAGTTTTACAAGAAAAGCAGGTTGTAAAATAAAGTACTTTATGGATAATTCCTGAAAGAGTTGTCCATGTAAGAACTGTGAATATCAGCTCCTCTGGGTCCTGCTTACCTTACCGCTGATTTCtctttctttctttctttctttctt---------------------------------------------------------tctttcttt-TTTGGTCTGGGCAAATCAGTGGTTTGTATATAG--ATTTTTTTTTAAATTTAGGACTGAAGTTTTTAAACTGGAAAGAAATTATAATTTTGAACAGTTTTTTGAGATTATCACATTTACTTTATACATATGCAAGAAGCTTTTTGTCTTGTGTCTTTCTGATAGCTCTAGCAGTTTTCATATTTTGGTCATAGTTTCAACATTTTAACATGTAAATAATAGAGTTTCATGCTGGTTTCCAGATTTTACTGTTCGGCTACATACAATGGAACCTTAAGTtatatatatatatatatatat-------------------------------tatTCTAAGGGGGAAAATGTTATATTTTTCTGTTTGTATAAGAGATGAATACAGTGGATACTTTTTCTATTGGTAATGATTGAATTCACCTCTTTCAGAAGACATTTTCTTTCTCTTCTGAGTAACTGAAATAAAATCTGGCCTTTGTGAAACCCTGGAAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 34012 2416 + 880730 GGGTGACGTGCCAGGCGCCATGTTGGAGGGCTGGTGGTAGCGGCTTGGGGAGGTGCTCACTCTGTCGGTCTCACTCTCTCACACGCTTCCCCTGGCTCCCTTCGTTCCCCCCCACCCCACTTGGCCTGCGTGCTGGAGGGTGTGCGAGGGAGTGGGAGGACGTCGGGGGGTGGGGGGAGGTGTTCCGGTCCCTAAGAGACCCGCGGAGGGAGGCGGAGGCTGTGAGGGACTCCGGGAAGCCATGGACGTCGACAGGCTCCAGGAGGCGCTGGAAGATTTTGAGAAGAGGGG-AAAAAGAAAGTTTGTCCTGTCCTGGATCAGTTTCTTT-GTCATGTAGCCAAGACTGGAGAAACAGATTCAGTGGTCCCAATTTAAAGGCCATTTTATTTTCAAACTGGAGAAAGTGACGGATGATTTCAGAACTTCAGCTCCTGCGCCAAGAGCTCCTCCCAACCCTAATGTCGAATATATTCCCTTTGATGAAACAAAGGAAAGAATACTGAAAA-CTGTCACTGGATTTCACCGTATCCCTTTTACTATTCAGCGACTATGTGAATTGTTAACAGATCCAAGGAGAAACTATACAGGAACAGAC-AAATTTCTCAGAGGAGTAGAAAAGAACGTGATGGTTGTTAGCTGTGTTTATCCTTCTTCAGAGAAAAACAATTCCAATAGTTTAAATCGAATGAATGGTGTCATGTTTCCTGGAAATGCACCAAGCTATACTGAGAGGTCTAATATAAATGGGGCTGGGACACCCAGGCCACTTAATTGACCAAAGGTTTCTTTGTCAGCCCCCATGACAACAAATGGGTGGCCTGAGAGCACAGACAGCAAAGAGGCAAATTTGCAGCAAAGTGAAGAGAAAACTCACAGTGACTCTTCCACATCTGAATCAGAAGTTTCCTCGGTGAGCCCTTTGAGAAATAAACATCCAGATGAAGATGCTGTGGAAGCTGAGGGGCATGAGGTAAAAAGACTCAGGTTTGAC-AAAAAGGCGAAGTCGGAGAAACAGCCAGTCAAGCGACTTGCAGAGAACTTTCTTCAGTTATGGTAGAAGAAACAGAAGCATCACCTTCATCTCACGATAAAGACAAAGAAAGCCGTGGTACCCGGCAGCGCGTTCagaagaggatgaaga---tgaacaggaagaagaagGGATTGAGAGACCATCTGTAAAAGGGAGGAGTAAGGAGGTCCTCAAATTCTTGCATTCATTGTTTTTGTGAAAGAACTGTACATCATGGAACTCCTTGTAATGCCGACGCTGGGCTTTTCTCCCACctgtatgcagttgctgctgaatttcaggggatgtgatttgaactacagaacatcggaattcatgaaaCTTAACTGTGGAGGTATTTTGAAAATAAAATTTAAGTACAACAACATTTGCTTATTTTTAGAGTCTTTTATGACATCAAGAGAAATGATCCCAGAACGTAAAAAACAAGAAAAAGAATCTGATGATGCCTCAACTGTGAATGAAGAGACTTCTGAGGAAAATAATGAAATGGAGGAATCTGATGTGTCTCAAGCTGAGAAAGATTTACTACATTCTGAAGGTAGTGAAAACGAAGGCCCTGAAAGTACTGGTTCTTCTGACTGCCGTGAAACAGAAGAATTAGTAGGATCCAATTCCAGTAAAACTGGAGAGATTCTTTCAGAATCATCCATGGA-AATGATGATGAAGCCACAGAAGTCACCGATGAACCAATGGAACAAGACTATTTAGAAACATTTACATGCAGTATTTTACACACAGTTCTGGTTTTAACACTGTATAAAACTTTTATGTAAAAAAGTGCACCTTTAGTTTTACAAGAAAAGCAGGTTGTAAAATAAAGTACTTCATGGATAATTCCTGAAAGAGTTGTCCATGTAAGAACTGTGAATATCAGCTCCTCTGGGTCCTGCTTACCTTACTGCTGATTTCtctttc---------ttctttctt---------------------------------------------------------tctttctttttttGGTCTGGGCAAATCAGTGGTTTGTGTATAG--ATTTTTTTTTTAATTTAGGATTAAAGTTTTTAACCTGGAAAGTAATTATAATTTTGAACAGTTTTTTGAGATTATCACATTTAGTTTATACATATGTAAGAAGCTTTTTGTCTTCTGTCTTTCTGATAGCTCTAGCAGTTTTCATATTTTGGTCATAGTTTCAACATTTTAACATGTGAATAATAGGGTTTCATGCTGGTTTCCAGATTTTA-TGTTTGGCTACATACAATGGAACCT--AATTATATATATATATAT-------------------------------------TATTCTAAGGGGGAAAATGTTATATTTTTCTGTTTGTATAAGAGATAAATACAGTGGATAC-TTTTCTATTGGTAATGACTGAGTTCATCTCTTTCAGAAGACATTTTCTTTCTCTTCTGAGTAACTGAAATAAAATCTGGCCTTTGTGAAACCCTGGAAAT i gorGor5.CYUI01015759v1 C 0 C 0 e macNem1.NW_012013899v1 15475 2872 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117215393 843 - 159171411 I e colAng1.NW_012116910v1 837232 5918 - 1687011 I e manLeu1.NW_012109696v1 28828 28162 - 6207128 I e chlSab2.chr4 1443779 1308 + 91010382 I e cerAty1.NW_012009470v1 519973 24350 - 16742782 I e rheMac8.chr6 179785515 1900 - 180051392 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=910.000000 s hg38.chr3_KI270934v1_alt 143608 1 + 163458 A s panTro5.chr3 2608096 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204923977 1 + 205426864 A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 36428 1 + 880730 A i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179787415 1 - 180051392 A i rheMac8.chr6 I 1900 C 0 e macNem1.NW_012013899v1 15475 2872 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117215393 843 - 159171411 I e colAng1.NW_012116910v1 837232 5918 - 1687011 I e manLeu1.NW_012109696v1 28828 28162 - 6207128 I e chlSab2.chr4 1443779 1308 + 91010382 I e cerAty1.NW_012009470v1 519973 24350 - 16742782 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=17595.000000 s hg38.chr3_KI270934v1_alt 143609 4 + 163458 CCAC s panTro5.chr3 2608097 4 - 202621043 CCAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204923978 4 + 205426864 CCAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 36429 4 + 880730 CCAC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179787416 4 - 180051392 CCAC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 18347 4 + 100774 CCAC i macNem1.NW_012013899v1 I 2872 I 2012 s cerAty1.NW_012009470v1 544323 4 - 16742782 CCAC i cerAty1.NW_012009470v1 I 24350 C 0 s chlSab2.chr4 1445087 4 + 91010382 CCAC i chlSab2.chr4 I 1308 C 0 s manLeu1.NW_012109696v1 56990 4 - 6207128 CCAC i manLeu1.NW_012109696v1 I 28162 C 0 s colAng1.NW_012116910v1 843150 4 - 1687011 CCAC i colAng1.NW_012116910v1 I 5918 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117215393 843 - 159171411 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=79642.000000 s hg38.chr3_KI270934v1_alt 143613 20 + 163458 GACCCTCAACTAGAAACACC s panTro5.chr3 2608101 20 - 202621043 GACCCTCAACTAGAAACACC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204923982 20 + 205426864 GACCCTCAACTAGAAACACC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 36433 20 + 880730 GACCCTCAACTAGAAACACC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179787420 20 - 180051392 GACCCTCAACTAGAAACACC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 20363 20 + 100774 GACCCTCAACTAGAAACACC i macNem1.NW_012013899v1 I 2012 C 0 s cerAty1.NW_012009470v1 544327 20 - 16742782 AACCCTCAATGAGAAACACC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1445091 20 + 91010382 AACCCTCAACTAGAAACACC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 56994 20 - 6207128 GATCCTCAACTAGAAACACC i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 843154 20 - 1687011 GACCCTCAACTAGAAACACC i colAng1.NW_012116910v1 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117215393 843 - 159171411 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=7960.000000 s hg38.chr3_KI270934v1_alt 143633 2 + 163458 AA s panTro5.chr3 2608121 2 - 202621043 AA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204924002 2 + 205426864 CA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 36453 2 + 880730 AA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2904968 2 - 123690457 aa i nomLeu3.chr11 I 4012 C 0 s rheMac8.chr6 179787440 2 - 180051392 AA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 20383 2 + 100774 AA i macNem1.NW_012013899v1 C 0 I 2064 s cerAty1.NW_012009470v1 544347 2 - 16742782 AA i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1445111 2 + 91010382 AA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 57014 2 - 6207128 AA i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 843174 2 - 1687011 AA i colAng1.NW_012116910v1 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117215393 843 - 159171411 I a score=6227.000000 s hg38.chr3_KI270934v1_alt 143635 5 + 163458 TACCA s panTro5.chr3 2608123 5 - 202621043 TACCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204924004 5 + 205426864 TACCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 36455 5 + 880730 TACCA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2904970 5 - 123690457 catca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179787442 2 - 180051392 ---CA i rheMac8.chr6 C 0 I 3 s cerAty1.NW_012009470v1 544349 2 - 16742782 ---CA i cerAty1.NW_012009470v1 C 0 I 3 s chlSab2.chr4 1445113 2 + 91010382 ---CT i chlSab2.chr4 C 0 I 3 s manLeu1.NW_012109696v1 57016 2 - 6207128 ---CA i manLeu1.NW_012109696v1 C 0 I 3 s colAng1.NW_012116910v1 843176 2 - 1687011 ---CA i colAng1.NW_012116910v1 C 0 I 3 e macNem1.NW_012013899v1 20385 2064 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117215393 843 - 159171411 I a score=102245.000000 s hg38.chr3_KI270934v1_alt 143640 25 + 163458 GCTCCTCCGCGAGTTT-CCAGCTCCA s panTro5.chr3 2608128 25 - 202621043 GCTCCTCCGCGAGTTT-CCAGCTCCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204924009 25 + 205426864 GCTCCTCCGCGAGTTT-CCAGCTCCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 36460 25 + 880730 GCTCCTCCGCGAGTTT-CCAGCTCCA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2904975 26 - 123690457 gctccttcacgggtctgtaagaccct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179787447 25 - 180051392 GCTCCTCCACGGGTCT-GCAGCTCCA i rheMac8.chr6 I 3 I 12093 s macNem1.NW_012013899v1 22449 25 + 100774 GCTCCTCCGTGGGTCT-CCAGCTCCA i macNem1.NW_012013899v1 I 2064 C 0 s cerAty1.NW_012009470v1 544354 25 - 16742782 GCTCCTCCGCGGGTCT-CCAGCTCCA i cerAty1.NW_012009470v1 I 3 C 0 s chlSab2.chr4 1445118 25 + 91010382 GCTCATCCGTGGGTCT-CCAGCTCCA i chlSab2.chr4 I 3 C 0 s manLeu1.NW_012109696v1 57021 25 - 6207128 GCTCCTCCACGGGTCT-CCAGCTCCA i manLeu1.NW_012109696v1 I 3 C 0 s colAng1.NW_012116910v1 843181 25 - 1687011 GCTCCTCCGCGGGTCT-CCAGCTCCA i colAng1.NW_012116910v1 I 3 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117215393 843 - 159171411 I a score=4500.000000 s hg38.chr3_KI270934v1_alt 143665 1 + 163458 C s panTro5.chr3 2608153 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chr3 204924034 1 + 205426864 C i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 36485 1 + 880730 C i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2905001 1 - 123690457 c i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012013899v1 22474 1 + 100774 C i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 544379 1 - 16742782 C i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1445143 1 + 91010382 C i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 57046 1 - 6207128 C i manLeu1.NW_012109696v1 C 0 I 3769 s colAng1.NW_012116910v1 843206 1 - 1687011 C i colAng1.NW_012116910v1 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117215393 843 - 159171411 I e rheMac8.chr6 179787472 12093 - 180051392 I a score=9871.000000 s hg38.chr3_KI270934v1_alt 143666 4 + 163458 AACC s panTro5.chr3 2608154 4 - 202621043 AACC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204924035 4 + 205426864 AACC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 36486 4 + 880730 AACC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2905002 4 - 123690457 aaac i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012013899v1 22475 4 + 100774 AGCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 544380 4 - 16742782 AGCC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1445144 4 + 91010382 AACC i chlSab2.chr4 C 0 I 33 s colAng1.NW_012116910v1 843207 4 - 1687011 AGCC i colAng1.NW_012116910v1 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117215393 843 - 159171411 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e rheMac8.chr6 179787472 12093 - 180051392 I a score=90286.000000 s hg38.chr3_KI270934v1_alt 143670 53 + 163458 TAAGACATCAGAGGCAGCATTGGTTCCTCACGTAGAGTCCAGCTCCGGGACCC s panTro5.chr3 2608158 53 - 202621043 TAAGACATCAGAGGCAGCATTGGTTCCTCACGTAGAGTCCAGCTCCGGGACCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204924039 53 + 205426864 TAAGACATCAGAGGCAGCATTGGCTCCTCACGTAGAGTCCAGCTACGGGACCC i panPan2.chr3 C 0 M 10571 s gorGor5.CYUI01015759v1 36490 53 + 880730 TAAGACATCAGAGGCAGCATTGGTTCCTCACGTAGAGTCCAGCTACGGGACCC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2905006 40 - 123690457 ctgaatatca------------gctcctccc-tggtctgcagctGCGAGACCC i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012013899v1 22479 53 + 100774 TAAGACATGAGAGGCAGCACTGGCTCTTCCCGTAGATTCCAGCCCCGAGACCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 544384 53 - 16742782 TAAGTCATGAGAGGCAGCACTGGCTCTTCCCGTAGATTCCAGCCCGGAGACCC i cerAty1.NW_012009470v1 C 0 C 0 s colAng1.NW_012116910v1 843211 53 - 1687011 TAAGACATGAGAGGCAGCACTGGCTCCTCCCGTAGATTCCAGCTCTGAGACCC i colAng1.NW_012116910v1 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117215393 843 - 159171411 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445148 33 + 91010382 I e rheMac8.chr6 179787472 12093 - 180051392 I a score=99220.000000 s hg38.chr3_KI270934v1_alt 143723 80 + 163458 TCATATTTGAACCGCAGGGCCATCTCATCCCTGGATCTCcagctgcaccacactcaaattagaacaacatcagttcctcc s panTro5.chr3 2608211 80 - 202621043 TCATATTTGAACCGCAGGACCATCTCATCCCTGGATCTCcagctgcaccacactcaaattagaacaacatcagttcctcc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 36543 80 + 880730 TCATATTTGAACGGCAGGGCCATCTCATCCCTGGATCTCCAGCTGCACCACACTCAAATTAGAACAACATCAGCTCCTCC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2905046 71 - 123690457 TCAAAGCAGAACATCAG------CTCCTCCCAAGGTCTGCGGCTGCAATACTCCAAAACGGG---AACATCAGCTCCTCC i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012013899v1 22532 80 + 100774 TTAGATTCGAATCacaggacctcttccccactagatctccagctgcacaatactcaaactgcaacaacatcagctcctcc i macNem1.NW_012013899v1 C 0 I 185 s cerAty1.NW_012009470v1 544437 80 - 16742782 TCAGATTCGAATCacaggaccttttccccactagatctccagctgcacaatactcaaactgcaacaacatcagctcctcc i cerAty1.NW_012009470v1 C 0 C 0 s colAng1.NW_012116910v1 843264 80 - 1687011 TCAGATTTGAACCacaggaccacttaccccctagatctccagctgcacaatactcaaactgcaacaacatcagctcctcc i colAng1.NW_012116910v1 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117215393 843 - 159171411 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445148 33 + 91010382 I e rheMac8.chr6 179787472 12093 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=10261.000000 s hg38.chr3_KI270934v1_alt 143803 14 + 163458 ccaggtctccacct s panTro5.chr3 2608291 14 - 202621043 ccaggtctccacct i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 36623 14 + 880730 CCAGGTCTCCACCT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2905117 14 - 123690457 CCGGATCTGCGGCT i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012009470v1 544517 14 - 16742782 tagggtgtccagct i cerAty1.NW_012009470v1 C 0 C 0 s colAng1.NW_012116910v1 843344 14 - 1687011 tagggtgtccagct i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117215393 843 - 159171411 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445148 33 + 91010382 I e rheMac8.chr6 179787472 12093 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=75058.000000 s hg38.chr3_KI270934v1_alt 143817 66 + 163458 gcacagccctcgaaagggaa---------tgtcagctcctccccgggtctccagctgtagggccctaaaactaga s panTro5.chr3 2608305 66 - 202621043 gcacagccctcgaacgggaa---------cgtcagctcctccccgggtctccagctgtagggccctaaaactaga i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 36637 66 + 880730 GCACAGCCCTCGAACGGGAA---------CGTCAGctcctccccgggtctccagctgcagggccctaaaactaga i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2905131 66 - 123690457 GCAAGACCCCcaatccggaa---------catcagctcctccctgggtctgcggctgcaagacactcaaactgga i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012009470v1 544531 63 - 16742782 gcacgaccctcaaactagaa------------cagctcctcccagggtcttcagctccacggccctcaaactata i cerAty1.NW_012009470v1 C 0 I 99 s colAng1.NW_012116910v1 843358 63 - 1687011 gcacgaccctcaaactagaa------------cagctcctcccagggtcttcagctccacggccctcaaactata i colAng1.NW_012116910v1 C 0 I 3 s calJac3.chr5 117216236 75 - 159171411 CCATGACCCTCAGAATTGCATGGTGATAGCACCGGCTCCTCCCTGGATCTCCAGCTCAATGACTCTCAGACTTGA i calJac3.chr5 I 843 C 0 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445148 33 + 91010382 I e rheMac8.chr6 179787472 12093 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=67603.000000 s hg38.chr3_KI270934v1_alt 143883 92 + 163458 ------acatcagctcccgcctgggtcgccagcagcaccaccctcaaactggaacatcagatcc-------ccacgggtctccagctgcagggccctcaaactgg s panTro5.chr3 2608371 92 - 202621043 ------acatcagctcccgcctgggtcgccagcagcaccaccctcaaactggaacatcagatcc-------ccacgggtctccagctgcagggccctcaaactgg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 36703 92 + 880730 ------acatcagctcctgcctgggtcaccagcAGCACCACCctcaaactggaacatcagatcc-------ccaagggtctccagctgcagggccctcaaactgg i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2905197 93 - 123690457 ------acttcagctcctccctgggtcCGCAGATGCAAGACCCTCAAACCGGAATATCAGCTCC------TCCACCGGTCAGCGGCTGCATCATCCTCAAACCAG i nomLeu3.chr11 C 0 C 0 s colAng1.NW_012116910v1 843424 92 - 1687011 ------acaacagctcctccctgtatccccagctccacaaccgtcaaactagaacaccagttcc------tctccaggtctccagctccacggctctcaaatga- i colAng1.NW_012116910v1 I 3 I 4 s calJac3.chr5 117216311 105 - 159171411 AAGGCAGCATCGGCTCCTCACCAAGGCTCCAGCTCCAAGACCCTCACACTAGAACAGCAGCAGCAGCTGCACCTTGGGTCTCCAGCTCCACCACCCTCAAAGAAG i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445148 33 + 91010382 I e cerAty1.NW_012009470v1 544594 99 - 16742782 I e rheMac8.chr6 179787472 12093 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=397829.000000 s hg38.chr3_KI270934v1_alt 143975 358 + 163458 ------aacatcagctccccaccagatctccagctgcacggacctcaaactggaa---------catcagctccccgccgggtctccagctgcactgcctgcaaactggaa------catgagctccctgcccggtctccagctgcatggccctcaaactgg---------aacatcagctccc----------------------------------------------caccagattgccagctg-----cacggccctcaaactggaa------tatcagctccaccccggggctccaggtgcacagccctcaacctgcaaca---------tcagctccccactgggtctccagatgaatggccctcaacctgcaacatca--gctc-cccaccgggtctccagatgcatggccctcaaactggaacatca--gctccccaccgggtctccagct s panTro5.chr3 2608463 358 - 202621043 ------aacatcagctncccaccagatctccagctgcacggacntcaaactggaa---------catcagctccccgccaggtctccagctgcactgcctgcaaactggaa------catgagctccctgccaggtctccagctgcatggccctcaaactgg---------aacatcagctccc----------------------------------------------caccagatcgccagctG-----CACGGCCCTCAAACTGGAA------TATAAGCTCCACCCCGGGGCTCCAGGTGCACAGCCctcaacctgcaaca---------tcagctccccactgggtctccacatgaacggccctcaaactgcaacatca--gctc-cccaccgggtctccagatgcatggccctcaaactggaacatcg--gctccccaccgggtctccagct i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 36795 358 + 880730 ------aacatcagctccccaccagatctccagctgcatggacctcaaactggaa---------catcagctccccgccgggtctccagctGCACTGCCTGCAAACTGGAA------CATGAGCTCCCTACCGGGTCTCCAGCTGCATGGCCCTCAAACTGG---------AACATCAGCTCCC----------------------------------------------CACCAGATCGCCGGCCG-----CACGGCCCTCAAACTGGAA------TATCAGCTCCACCCCGGGGCTCCAGGTGCACAGCCCTCAACCTGCAACA---------TCAGCTCCCCACCGGGTCTCCAGATGCACAGCCCTCAACCTGCAACATCA--GCTC-CCCACCGGGTCTCCAGATGCTTGGCCCTCAAACTGGAATATCG--GCTCCCCACCGGGTATCCAGCT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2905290 358 - 123690457 ------AACATGAGCTCCTCCCTGGATCCGTGGCTGCAAGACCCAGAAACCAGAA---------CAGAAGCTCCTCCTCGGGTCCATGGCTGCACCACCctcaaaccggaa------catcagctcttacccgggtctgtggctgcacgaccctcaaactgg---------aacatcagctcct----------------------------------------------cccctggaatgcggctg-----cacgaccctcaaactggaa------tatctgctcttccccgggtctgcggctgcactaccctcaaactggaaca---------tcggcttctccccgggttttcggctgcacgaacctcaaactgaaacaccg--gctc-ctctcagggtctgcggctgcaagatcctcaaactacaacatca--gctcctctccagttctgcggct i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012009470v1 544693 386 - 16742782 ------AACATCAGCTCCTCCCTAGTTCTCCAGCTGCACGACCCTCAAACTGGAA---------CATGAGCTCCCCGCCGTGTctccagctgcatggcccttaaactggaa------catcagcttctg-------------------ggccctgaaactgg---------aacatcagctcccacagggtctccagctgcatcgccctcaaagtggaacatcggcgccaccctgaatctccagttg-----cacggccctcaaactggaa------catcaactcccccacggttctccagctGCACAGCCctcaaactggaaca---------tcagctcccctcctggtctccagctgcacggttctcaaactggaacatca--gctctcttgccatgtgtccagctgcacggacctcaaactgcaacatca--gctccccgctgagtctccagct i cerAty1.NW_012009470v1 I 99 C 0 s colAng1.NW_012116910v1 843520 338 - 1687011 ------aacatcagctcctccctagttctccagctgcacgaccctcaaattggaa---------catgagctccctgccgtgtctccagctgcatggcccttaaactggaa------catcagcttcca-------------------ggccctcaaactgg---------aacatcagctcc-----------------------------------------------caccgggtctccagctg-----catcgccctcaaactggaa------catcggcgccaccctgaatctccagttgcacggccctcaaactggaaca---------tcagctccccaccggttctccagctgcacggccctcaaactggaacataa--gctc-cctgtagggtctccagctgcacggccctcaaactggaacataa--gctccctgtagggtctccagct i colAng1.NW_012116910v1 I 4 C 0 s calJac3.chr5 117216416 412 - 159171411 AACAGCAGCACCGGctcctccctgggtctccagctccaccaccctcagatctgaataccagtagcaccagctcctgtctgggtctccagttctatgaccttcaaactagaacaacggcaccagttcctcccagagtctcaagctccacgaccctcagacctaaacaaaaacaacactggctcct----------------------------------------------ccctgggtctccagcttcaacccaAGACCCTCAAACAAGAACAGCAGCACCAGCTCCTCCCCAGGGCTCCAGCTCCACCATcctcagacttaaacaataacaaccgcagctcctctgtgggtctccagctccacgactctcaaacaaaaacaccaccactc-ctccctgggtttccagctccatgaccctcgaactagaacaacactgcacctccctgggtctccagct i calJac3.chr5 C 0 T 1040 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445148 33 + 91010382 I e rheMac8.chr6 179787472 12093 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=6978.000000 s hg38.chr3_KI270934v1_alt 144333 28 + 163458 gcatgg-ccttaaac-tggaacat-------------------cagctc s panTro5.chr3 2608821 28 - 202621043 gcatgg-ccttaaac-tggaacat-------------------cagctc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 37153 28 + 880730 GCAtgg-ccttaaac-tggaacat-------------------cagctc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2905648 48 - 123690457 gcacga-ccctcaatgtagaacattggcacttctctgggtctgcagctA i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012009470v1 545079 29 - 16742782 gcatggtgctcaaac-tggaacat-------------------cagctc i cerAty1.NW_012009470v1 C 0 I 297 s colAng1.NW_012116910v1 843858 6 - 1687011 gcacgg------------------------------------------- i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445148 33 + 91010382 I e rheMac8.chr6 179787472 12093 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=320365.000000 s hg38.chr3_KI270934v1_alt 144361 496 + 163458 cgagaccctcaaacaggaacatcagctccccacagggtctccagctGCACAGCCCTCAAATTGCAACATCACTTCCCCCCTGCATGTCCAGCTGCACCG-CctcaaactgcaacatcagctccccgctgggtctccagcAGCATGGCCCTCAACCTGGAACATCAGCTCCCCCCAACCCGGGTCTCCAACTCCACAGCCctcaacctgcaacactggctaccaactgggtctccagatgcatggccctcaaactggaacatcagctcca-cccccggtatccagctgcacagccctcaaactggaacatcagctccctgccgggtctccaggtgcacggccctcaaactggaacatcagctccccaccaggtctccagccgcacggccctcatactggaacatcagctccccaccagatctccagctgcacagctctcaaacaggaacatcagctccccacagggtctccagctGCACGGCTCTCAAACAAGAACATC s panTro5.chr3 2608849 496 - 202621043 cgagaccctcaaacaggaacatcagctccccacagggtctccagctgcacagccctcaaattgcaacatcacttcccccctgcgtgtccagctgcaccg-cctcaaactgcaacatcagctccccgctgggtctccagcAGCACGGCCCTCAACCTGGAACATCAGCTCCCCCCAACCCGGGTCTCCAGCTCCACAGCCctcaacctgcaacactggctacccactgggtctccagatgcatggccctcaaactggaacatcagctcaa-cccccggtatccagctgcacagccctcaaactggaacatcagctccctgccgggtctccaggtgcacggccctcaaactggaacatcagctccctgccgggtctccaggtgcacggccctcaaactggaacatcagctccccaccaggtctccagctgcacggccctcatactggaacatcagctccccaccaggtctccagctgcacggctctcaaacaggaacatc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 37181 496 + 880730 ccaggccctcaaacaggaacatcagctccccacagggtctccagctgcacagccctcaaattgcaacatcagttccccgctgggtctccagctgcaccg-cctcaaactgcaacatcagctccccgctgggtctccagcAGCACGGCCCTCAACCTGGAACATCCGCTCCCCCTAACCCGGGTCTCCAGCTCCACAGCCCTCAACCTGCAACACTGGCTACCCACT-GGTCTCCAGATGCACGGCCCTCAAACTGCAACATCAGCTCCACCCCCCGGTATCCAGCTGCACGGCCctcaaactggaacatcagctccctgccgggtatccagctgcacggccctcaaactggaacatcagctccccgccgggtctccaggtgcacggccctcaaaatggaacatcagctccctgccgggtctccaggtgcacggccctcaaactggaacatcagctccccaccagatctccagctgcacggccctcatactggaacatc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2905696 492 - 123690457 CAAAACCCTCAAACAGGAACATCCGCGCCTCCACAGGTCTGCGGCTGCAAGAccctgaaactggaacatcagctcctccctg-gtccacggctgcaagaccctcaaactggaacatcagctcctccctgggtttgcggctgcaagaccctcaaactggaacatcagctcctc----cccgggtccgtggctgcaagaccctcaaaccggaacatcagctcctccccgggtccgtggctgcaagaccctcaaaccggaacatcagcacct-ccccgggtctgcggctGCACGACCctgaaattggaacatcagcgcctccccgagtctgccgctgcacggccctcagactggaacatcagctcctcccctggtctgtggctgaacgaccctgaaactggaacatcagctcttccccaggtctgcagctacacgatcctgaaactggaacatcagctcttccccgggtctgcggctgcacgaccctcaaaatggaacATC i nomLeu3.chr11 C 0 I 1032 s colAng1.NW_012116910v1 843864 489 - 1687011 -----ccctcaaactggaacgtcggctcccccctgagtctccagctgcacggccctcaaactggaacattggctccccgcccggtctccagctgcatggcccttaaactggaacatcagctcccctcctgatctccagctgcacggttctcaaactagaacatcatctctttt---gccatgtgtccggctgcacggcccacaaactggaacatcagctccccgccgggtgtccggctgcatggtgctcaaactggaacatcagctccc-cgcctggtctccagctgcacggccctcaaactggaacatcagctccctgtagggtctccagctacacggctctcaaactggaacaacagctccccacccggtctccagctgcatggctctcaaactggaacatcagctctctgccttgtgtccacctgcatggcccttaaactggaacagcagctccctgctgggtctccagcagcacggccctcaaactggaacatc i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445148 33 + 91010382 I e cerAty1.NW_012009470v1 545108 297 - 16742782 I e rheMac8.chr6 179787472 12093 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=7786.000000 s hg38.chr3_KI270934v1_alt 144857 11 + 163458 AGCTCCCCACA s panTro5.chr3 2609345 11 - 202621043 agctccccaca i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 37677 11 + 880730 agctccccacc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2907220 11 - 123690457 AGCTCCTCCCT i nomLeu3.chr11 I 1032 C 0 s colAng1.NW_012116910v1 844353 11 - 1687011 agctccccact i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445148 33 + 91010382 I e cerAty1.NW_012009470v1 545108 297 - 16742782 I e rheMac8.chr6 179787472 12093 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=25043.000000 s hg38.chr3_KI270934v1_alt 144868 26 + 163458 GGGTCTCCAGCTGCACGGCCCTCAAC s panTro5.chr3 2609356 26 - 202621043 gggtctccagctgcacggccctcaac i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 37688 26 + 880730 agatctccagctgcacggctctcaaa i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2907231 26 - 123690457 GGGTTTGCGGCTGCAAGACCGTCAAA i nomLeu3.chr11 C 0 C 0 s chlSab2.chr4 1445181 26 + 91010382 GGGTCTCCAGCTGCAGGGCCCTCAAC i chlSab2.chr4 I 33 I 13243 s colAng1.NW_012116910v1 844364 26 - 1687011 gggtctacagcagcactgccctcaaa i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e cerAty1.NW_012009470v1 545108 297 - 16742782 I e rheMac8.chr6 179787472 12093 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=38516.000000 s hg38.chr3_KI270934v1_alt 144894 65 + 163458 CTGCAACACTGGCTCCCCACCGGGTCTCCCGATGCACGGCCctcaaactgcaacatcagttcccc s panTro5.chr3 2609382 65 - 202621043 ctgcaACACTGGCTCCCCACCGGGTCTCCAGATGCACGGCCctcaaactgcaacatcagttcccc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 37714 65 + 880730 caggaacatcagctccccacagggtctccagctGCACGGCTCTCAAACAGGAACATCAGCTCCCC i gorGor5.CYUI01015759v1 C 0 I 234 s nomLeu3.chr11 2907257 65 - 123690457 CCGGAACATCAGCTCCTCCCCGGGTCCGCAGCTGCAAGACCCTCAAACCGGAACATCAGCTCCTC i nomLeu3.chr11 C 0 I 1 s colAng1.NW_012116910v1 844390 65 - 1687011 ctggagcattagcttacccctgtgtgtccagctccccggccctccaattggaacatcagctccct i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545108 297 - 16742782 I e rheMac8.chr6 179787472 12093 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=47954.000000 s hg38.chr3_KI270934v1_alt 144959 108 + 163458 -ccgggcatacagctgcatggccttaaac-------------------------------------------------------------------------------------------------tggaacatcagctcc-----------------------------------------------ccgctaggtctccaggagcacggtcctcaaactggaacatcagctccctgccaggtcaccagctg s panTro5.chr3 2609447 203 - 202621043 -ccgggtatacagctgcatggccttaaactggaacatcagctccctgcccaggtctccagatgcacggccctcaaactggaacatcagttccccgccgggtctccagctg--cacggccctcaaattggaacatcagctcc-----------------------------------------------ccgctaggtctccaggagcacggtcctcaaactggaacatcagctccctgccaggtcaccagctg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 38013 203 + 880730 -ccgggtctccagctgcacggccctcaaa-----------------------------------------------ctggaacatcagctccccgccaggtctccag--gtgcatggccctcaaattggaacatcagctccccgccaggtctccaggtgcatggccctcaaactggaacatcagttcaccgccaggtctccaggagcacgggcctcaaactggaacatcagctccccgccaggtctccaggtg i gorGor5.CYUI01015759v1 I 234 C 0 s nomLeu3.chr11 2907323 109 - 123690457 -CCGGGTCCGCAGCTGCAAGACCCTCAAA------------------------------------------------------------------------------------------------CCGGAACATCAGCTCC-----------------------------------------------TCCCCAGATCCGCAGCTGCAAGACCCTCAAACCGGAACATCAGCTCCTCCCCAGGTCCGCGGCTG i nomLeu3.chr11 I 1 I 183 s colAng1.NW_012116910v1 844455 109 - 1687011 gatgagtctccagctgcacggccctcaaa------------------------------------------------------------------------------------------------ctggaacatcagctcc-----------------------------------------------cc-ccagatctacagctgcacggccctgaaactggaacatcagctccccgctgggtctccagctg i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545108 297 - 16742782 I e rheMac8.chr6 179787472 12093 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=18213.000000 s hg38.chr3_KI270934v1_alt 145067 23 + 163458 catggccctcaaactggaacatc s panTro5.chr3 2609650 23 - 202621043 catggccctcaaactggaacatc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 38216 23 + 880730 catggccctcaaattggaacatc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2907615 23 - 123690457 CAAGACCCTCAAACCAGAACATC i nomLeu3.chr11 I 183 C 0 s colAng1.NW_012116910v1 844564 23 - 1687011 cacagccctcaaactggaacatc i colAng1.NW_012116910v1 C 0 I 687 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545108 297 - 16742782 I e rheMac8.chr6 179787472 12093 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=246.000000 s hg38.chr3_KI270934v1_alt 145090 2 + 163458 ac s panTro5.chr3 2609673 2 - 202621043 ac i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 38239 2 + 880730 ag i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2907638 2 - 123690457 AG i nomLeu3.chr11 C 0 C 0 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e colAng1.NW_012116910v1 844587 687 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545108 297 - 16742782 I e rheMac8.chr6 179787472 12093 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=220970.000000 s hg38.chr3_KI270934v1_alt 145092 333 + 163458 ctccccgccaggtctccagctgcatggccctcaaattgcaacatcagctcccatcagagcctccagctgcatggccatcaaactggaacatcagctcccccgcgggtctccagctgcacagacctcaaacttgaacatcagctccccgccgggtcatcaactgcatggccctcaaactggaacatcagctccacccctgggtctccagtagcacggccctacaactggaacatcagcttccccctgggtctccggctgcacagccc-tacaaccggaacatcagctccctgccgggtctccagctGCACAGCCCTCAAACTGG-AACATCAGCTC s panTro5.chr3 2609675 333 - 202621043 ctccccgccaggtctccagctgcatggccctcaaattgcaacatcagctcccatcagagtctccagctgcatggccatcaaactggaacatcagcttccccgcgggtctccagctgcacagacctcaaacttgaatatcagctccccgccgggtcatcaactgcacggccctcaaactggaacatcagctccacccctgggtctccagcagcacggccctacaactggaacatcagcttccccccgggtctccggctgcacagccc-tacaaccggaacatccgctccctgctgggtctccagctGCACGGCCCTCAAACTGG-AACATCAGCTC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 38241 332 + 880730 ctccccgccaggtctccagctgcatggccctcaaattgcaacatcagctcccatcagagtctccagctgcatggccatcaaactggaacatcagctcccccacgggtctccagctgcacagacctcaaacttgaacatcagctccccgccgggtcatcaactgcatggccctcaaactggaacatcagctccacccctgggtctccagcagcacagccctacaactggaacatcagcttccccc-aggtctccagctGCACAGCCC-TACAACCGGAACATCAGCTCCCTGCCGGGTCTCCGGCTGCATCGCCCTCAAACTGG-AATATCAGCTC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2907640 333 - 123690457 CTCCTCCCCAGATCCGCGGCTGCAAGACCCTCAAACTGGAACATCAGCTCCTCCCCAGGTCCGCGGCTGCAAGACCTTCAAACCGGAACATCAGCTCCTCCCCGGGTCCGTGATTGCACCACCCTCAAAACGGAACATCAGCTCCTCCCCGGGTCCGTGGCTGCAAGACCCCCAAACCGGAACATCAGCTCCTCCCC-GGGTCTGTGGCTGCAAGACCCTCAAACCGGAACATCAGCTCCTCCCCAGGTCTGCGGCTGCAATACCC-TGAAACCAGAACATCAGCTCCTCCAAGGGTCTGTGGCTGCAAGACCCTCAAACCGGTAACATCAGCTC i nomLeu3.chr11 C 0 C 0 s colAng1.NW_012116910v1 845274 328 - 1687011 ctccccgccaggtctccagctGCACGGCCctcaaactggaacatcagctcagccctgg--ctccagctgcatggccctcaaactggaacatcggct-ccccgcggatctacagcggcacag-cctcaaaatggaacatcagctccccgccgggtctccagctgcatggccctcaaactggaacatcagctccctgcc-aggtatcctgcttcatggccctaaaaatggaacattagctccccgtagggtctccagctgcacggcccttaaaactggaacatcggctcccc-ccggatctacagcGGCACAGCCCTCAAACTGG-AACATCAGCTC i colAng1.NW_012116910v1 I 687 I 185 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545108 297 - 16742782 I e rheMac8.chr6 179787472 12093 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=1407.000000 s hg38.chr3_KI270934v1_alt 145425 3 + 163458 CCC s panTro5.chr3 2610008 3 - 202621043 CCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 38573 3 + 880730 CCC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2907973 3 - 123690457 CTC i nomLeu3.chr11 C 0 I 1067 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545108 297 - 16742782 I e rheMac8.chr6 179787472 12093 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=48377.000000 s hg38.chr3_KI270934v1_alt 145428 195 + 163458 GCTGAGTTCAAACTAttccagtttgagggccgtgcagctggagacccggcggggagctgatgttccagtctgagggccgtgcagctggagacccgcgggggagccgaacttccggtttgagggccatgcagctggatacccggtggggagctgaagttccagtttgagggccgtgaagctggagacccgttgggg s panTro5.chr3 2610011 195 - 202621043 GCTGAGTTCAAACTAttccagtttgagggccgtgcagctggagacccagtggggagctgatgttccagtctgagggccgtgcagctggagacccggcagggagctgatgttccagtctgagggccatgcagctggatacccggtggggagctgaagttccagtttgagggccatgcagctggatacccggtgggg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 38576 194 + 880730 GCTGGGTTCAAACTATTCCAGTTTGA-GGCCGTGCagctggagacccggcagggagctgattttccagtctgagggccgtgcagctggagacctggtggggagttgaagttccagtttgagggccatgcagctggatacccggtggggagctgatgttccagtttgagggctgtgaagctggagacccggtgggg i gorGor5.CYUI01015759v1 C 0 C 0 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545108 297 - 16742782 I e rheMac8.chr6 179787472 12093 - 180051392 I e nomLeu3.chr11 2907976 1067 - 123690457 I e panPan2.chr3 204924092 10571 + 205426864 M a score=4407.000000 s hg38.chr3_KI270934v1_alt 145623 47 + 163458 agctgaagttccagtttgagggccgtgaagctggagacccggtgggg s panTro5.chr3 2610206 47 - 202621043 agctgaagttccagtttgagggccgtgaagctggagacccagtgggg i panTro5.chr3 C 0 C 0 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545108 297 - 16742782 I e rheMac8.chr6 179787472 12093 - 180051392 I e nomLeu3.chr11 2907976 1067 - 123690457 I e gorGor5.CYUI01015759v1 38770 0 + 880730 C e panPan2.chr3 204924092 10571 + 205426864 M a score=0.000000 s hg38.chr3_KI270934v1_alt 145670 53 + 163458 agctgatgttccagtctgagggccgtgcagctggagacccagtggggagctga e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545108 297 - 16742782 I e rheMac8.chr6 179787472 12093 - 180051392 I e nomLeu3.chr11 2907976 1067 - 123690457 I e gorGor5.CYUI01015759v1 38770 0 + 880730 C e panPan2.chr3 204924092 10571 + 205426864 M e panTro5.chr3 2610253 0 - 202621043 C a score=27583.000000 s hg38.chr3_KI270934v1_alt 145723 123 + 163458 tgttccagtctgagggccgtgcagctggagacccggtggggagctgaacttccagtttgagggccatgcagctggatacccggtggggagctgaagttccagtttgagggccattcagctgaa s rheMac8.chr6 179799565 122 - 180051392 Tgttccagtttgaggtccgtgcagctggagacccggcaggcagctgacattccagtttgagcgccatgcagctggagacccgg-gggtagctgatgttgcagtttgagggccgtgcagctgga i rheMac8.chr6 I 12093 I 13 s cerAty1.NW_012009470v1 545405 122 - 16742782 TGTTCCAGTTTGAGGTCCGTGCAGCTGGAGACCGGGCAGGCAggtgacgttccagtttgagcgccatgcagctggagacctgg-gggtagctgatgttgcagtttgagggccgtgcagctgga i cerAty1.NW_012009470v1 I 297 I 13 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e nomLeu3.chr11 2907976 1067 - 123690457 I e gorGor5.CYUI01015759v1 38770 0 + 880730 C e panPan2.chr3 204924092 10571 + 205426864 M e panTro5.chr3 2610253 0 - 202621043 C a score=0.000000 s hg38.chr3_KI270934v1_alt 145846 13 + 163458 agacttggggaga e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545527 13 - 16742782 I e rheMac8.chr6 179799687 13 - 180051392 I e nomLeu3.chr11 2907976 1067 - 123690457 I e gorGor5.CYUI01015759v1 38770 0 + 880730 C e panPan2.chr3 204924092 10571 + 205426864 M e panTro5.chr3 2610253 0 - 202621043 C a score=105655.000000 s hg38.chr3_KI270934v1_alt 145859 160 + 163458 agctgatgttccagtttgagggccgtgcagctggagactcgg-ggatagccgatgttgcagtttgagggccgtgcagctggagacccgggtgggaaccgatgttccagtttgggagccatgcagctggaggcactgcggggagcagatgttccagtttgaT s panTro5.chr3 2610253 160 - 202621043 agctgatgttccagtttgagggccgtgcagctggagactcgg-gggtagccgatgttgcagtttgagggctgtgcagctggagacccgggtgggaactgatgttccagtttgggAGCCATGCAGCTGGAGGCACTGCGGGGAGCAGATGTTCCAGTTTGAT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 38770 159 + 880730 agctgatgttccagtttgagggctgtgcagctggagactcgg-gg-tagccgatgttgcagtttgagggccgtgcagctggaggcccgggtgggaaccgatgttccagtttgggagccatgcagCTGGAGGCACTGCGGGGAGCAGATGTTCCAGTTTGAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 179799700 145 - 180051392 agctgatgttctagtttgagaaccgtgcagctggagaccaggcggggagacaacct----------------tccagctggagaccccgcagggagctgatgttccagtttcagggccatgcagctggagCCCAGGCGGGGAGCTGATGTTCCAGTTTGAT i rheMac8.chr6 I 13 C 0 s cerAty1.NW_012009470v1 545540 145 - 16742782 agctgatgttctagtttgagaaccgtgcagctggagaccaggcggggagccaatgt----------------tccagctggagaccctacagggagctgatgttccagtttgagggccgtgcagctggagACCAGGAGGGGAGCTGATGTTCCAGTTTGAT i cerAty1.NW_012009470v1 I 13 C 0 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e nomLeu3.chr11 2907976 1067 - 123690457 I e panPan2.chr3 204924092 10571 + 205426864 M a score=2255.000000 s hg38.chr3_KI270934v1_alt 146019 2 + 163458 GT s panTro5.chr3 2610413 2 - 202621043 GT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 38929 2 + 880730 GT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2909043 2 - 123690457 GC i nomLeu3.chr11 I 1067 C 0 s rheMac8.chr6 179799845 2 - 180051392 GT i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 545685 2 - 16742782 GT i cerAty1.NW_012009470v1 C 0 C 0 e macNem1.NW_012013899v1 22612 185 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e panPan2.chr3 204924092 10571 + 205426864 M a score=50712.000000 s hg38.chr3_KI270934v1_alt 146021 36 + 163458 TCCTCCCTGGGTCTCCAGGTGCACGGCCATCAAACT s panTro5.chr3 2610415 36 - 202621043 TCCTCCCTGGGTCTCCAGGTGCACGGCCATCAAACT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 38931 36 + 880730 TCCTCCCTGGGTCTCCAGGTGCACGGCCATCAAACT i gorGor5.CYUI01015759v1 C 0 I 125 s nomLeu3.chr11 2909045 36 - 123690457 TCCTCCCTGGGTCCGTGGCTGCAAGACCCTCAAACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179799847 36 - 180051392 TCCCCCCCAGGTCTCCAGGTGCAGGGCCCTCATACT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 22797 36 + 100774 TCCTCCCTAGTTCTCCAGCTGTACGACCCTCAAATT i macNem1.NW_012013899v1 I 185 C 0 s cerAty1.NW_012009470v1 545687 36 - 16742782 TCCCCCCCAGGTCTCCAGGTGCAGGGCCCTCATACT i cerAty1.NW_012009470v1 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e panPan2.chr3 204924092 10571 + 205426864 M a score=24007.000000 s hg38.chr3_KI270934v1_alt 146057 17 + 163458 GGAACATCAGCTCCCC-------------------G s panTro5.chr3 2610451 17 - 202621043 GGAACATCAGCTCCCC-------------------G i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 39092 17 + 880730 GGAACATCAGCTCCCC-------------------G i gorGor5.CYUI01015759v1 I 125 C 0 s nomLeu3.chr11 2909081 36 - 123690457 GGAACATCAGCACCTCCTCGGGGCCGCGGCTGCAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179799883 17 - 180051392 GGAACATCAGTTCCCC-------------------G i rheMac8.chr6 C 0 I 104 s macNem1.NW_012013899v1 22833 17 + 100774 GGAACATGAGCTCCCC-------------------G i macNem1.NW_012013899v1 C 0 I 2078 s cerAty1.NW_012009470v1 545723 17 - 16742782 GGAACATCAGTTCCCC-------------------G i cerAty1.NW_012009470v1 C 0 I 547 e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e panPan2.chr3 204924092 10571 + 205426864 M a score=175641.000000 s hg38.chr3_KI270934v1_alt 146074 444 + 163458 GCCCTCAAACCGGAACATCAGCTCCCCGCCGGATCTCCAGCTGCACAGCTGTCAAC----ATCAGct-cctccccgagtcctcagctgcacgaccctcaagttagaacatcagcttctccccaagtcttcagctgcgtgaccctcaatctagaacatcagttcctctacaggtctgcagctgcaagaccctc-----------------------------------------------aatctagaacgtcagctcctccctgagtctccagctgaaacaccctcaaaacgaacaacatcagctcctccctgagtcttcagctgcacgacgctcaatctacaacatcagctcctgtctggttc-----------------------------------------------tccagctgcacgaccctcaaactacaacctcagctcttccccgagtcttctgctgcatgaccctcaatctagaacataagctcctctctcggtgtccacctgtagggacctcaaattagaacgtcagctcct s panTro5.chr3 2610468 444 - 202621043 GCCCTCAAACTGGAACATCAGCTCCCCGCCGGATCTCCAGCTGCACAGCCGTCAAC----ATCAGct-cctccccgagtcctcagctgcacaaccctcaagttagaacatcagcttctccccaagtcttcagctgcgtgaccctcaatctaaaacgtcagttcctctacgggtctgcagctgcaagaccctc-----------------------------------------------aatctagaacgtcagctcctccctgagtctccagctgaaacaccctcaaaacgaacaacatcagctcctccccgagtcttcagctgcacgacgctcaatctagaacatcagctcctgtctggttc-----------------------------------------------tccagctgcacgaccctcaaactacaacctcagctcttccccgagtcttctgctgcatgaccctcaatctagaacataagctcctctctcggtgtccacctgtagggacctcaaattagaacgtcagctcct i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 39109 492 + 880730 GCCCTCAAACTGGAACATCAGCTCCCCGCCGGATCTCCAGCTGCACAGCCGTCAAC----ATCAGCTCcctccccgagtcctcagctgcacaaccctcaagttacaacatcagcttctccccaagtcttcagctgcgtgaccctcaatctagaacatcagttcctctctgggtctgcagctgcaagaccctcaaactactacatcagcttccctccaggtctccagttccgtgaccctaaatctagaacatcagctcctccctgagtctccaactgaaagaccctcaaagcgaacaacatcagttcctccccgagtcttcagctgcatgatgctcaatctagaacatcagctcctgtctgattc-----------------------------------------------tccagctgcacgaccctcaaactacaacctcagctcttccccgagtcttctgctgcatgaccctcaaactagaacctcagctcctccccaagtcttcagctgcacgacccttaatctagaacctcagctcct i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2909117 493 - 123690457 ACCCTCAAACCGGAACATCAGCTCCTCCCCGGGTCTGCGGCTGCACGACCCTCAAAGCAGATCAGCT-CCTCGCCGGGcctgcggctgcacgaccctcaaactggaacatcagctcttccctgtgtctgcggttgcacgaccctcaaactggatcatcagctcctctccgggaatgtggctgcacgaccctc-----------------------------------------------aaactggaacatcagatctttcccggatctgcgggtacacgaccctcaaactgg--aacatcagctcctcccctggtctgcggttgcacgaccctcaaactggaacatcagctcttccatggatctgcgggtacacgaccctcaaactggaacatcagctcctcccctggaatgcagctgcacgaccctcaaactggaatatctgctcttccccgggtctgcgcctgcactaccctcaaactggaacattggctcctccccgcgttttcagctgcacggacctcaaactgaaacaccggcgcct i nomLeu3.chr11 C 0 C 0 e macNem1.NW_012013899v1 22850 2078 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545740 547 - 16742782 I e rheMac8.chr6 179799900 104 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=34560.000000 s hg38.chr3_KI270934v1_alt 146518 189 + 163458 cccagagtcttcagctgcatgaccctcaatctttaacatcagctcctctccgggtctgcagctgcatgaccctaaaaatacacgagcagctcctccctgaatcttcagctgtacgaccctcaaactacaacatcagctcct------------gtctgca---------------------------tctcta-------gctgcagggccctcaaactagaatatcagctcctc s panTro5.chr3 2610912 189 - 202621043 cccagagtcttcagctGCATGACCCTCAATCTTTAACATCAGCTCCTCTCCGGGTCTGCAGCTGCATGACCCTAAAAATACACGAGCAGctcctccctgaatcttcagctgtatgaccctcaaactacaacatcagctcct------------gtctgca---------------------------tctctc-------gctgcaGGGCCctcaaactagaatatcagctcctc i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2909610 235 - 123690457 ctcagggtctttggctgcaagatcctcaaactacaacatcggctcctctccaggtctgcggctGCACGACCCTCAATGTAGAACACTGGCACCTCCCCGGGTCTGCGGCTGCAAAACCCTCAAACAAGAACATCCGCGCCTCCACGGCTCTGCGGCTGCAAGACCCTGAAACCAGAACATCAGCTCCTCCCTAGTCCACGGCTACAAGACCctcaaactggaccatcagctcctc i nomLeu3.chr11 C 0 C 0 e macNem1.NW_012013899v1 22850 2078 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545740 547 - 16742782 I e rheMac8.chr6 179799900 104 - 180051392 I e gorGor5.CYUI01015759v1 39601 0 + 880730 C e panPan2.chr3 204924092 10571 + 205426864 M a score=111336.000000 s hg38.chr3_KI270934v1_alt 146707 357 + 163458 cccgatttttcacctgcatgaccctcaaactagaacatcagctcctgtacagatttccaactgtagggccctcaaactagaacatcagctcctccccaagtcagcagctgcaagaccctcaaattagcaactcagctcctcccggagtcttcagctgcatgaccctcaatctcgaagatcagatactctccgggtcttcagctgtagggccctcaaactataacatcagctcctctccgagtattcagctgcacgaccctcaatctcgaacatcagcacctcttcaggtctgcagctgtagggccctcaatctagaacatcagctcctccctgagtcttctgctgcacgaccctcaa s panTro5.chr3 2611101 310 - 202621043 cccgattcttcacctgcatga-----------------------------------------------ccctcaaactagaacatcagctcctccccaagtcagcagctgcaagaccctcaaattaccacctcagctcctcccggagtcttcagctgcacgaccctcaatctcgaAGATCAGATACTCTCGGGGTCTTCAGCTGTAGGGCCctcaaactataacatcagctcctctctgagtattcagctgcacgaccctcaatctcgaacatcagctcctcttcaggtctgcagctgtagggccctcaatctagaacatcagctcctccctgagtcttctgctgcacgaccctcaa i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 39601 310 + 880730 cccgagtcttcggctGCACGACCCTCAATCTAGAACATCAGCTCCTCTCCAGGTCTACAGCTGCAAGAccctcaaactagaacatcagctcctctccaggtctgcagctgcaagaccctcaatctagaacatcagctcctccctgagtcttcacctgcatgatcctcaatctagaacatcagctcctctccaggtctgcagctgcaagaccttcaaactagaacatcatcttctctc-----------------------------------------------caggtctccagttccgtgaccctaaatctagaacatcagctcctccctgagtctccaactGAAAGACCCTCAA i gorGor5.CYUI01015759v1 C 0 I 11 s nomLeu3.chr11 2909845 354 - 123690457 cctgggtttgcggctgcaagaccgtcaaaccggaacatcagctcctccccgggtccgcagctgcaagaccctcaaaccggaacatcagctcctccccgggtccgcggctGCAAGACCCTCAAACTGGAACATCAGCTCCTCCCCAGGTCCGCGGCTGCAAGACCCTCAAACCGGAAAATCAGCACCTCCTCGGGTCCGCGGCTGCAAGACCTTCAAACCGGAACATCAGCTCCTCCCCGGGTCCGTGATTGCACCACCCTCAAACCAGAACATCAGCTCCTCCCCGGGTCTGCGGCTGCACGACCCTCAA---AGCAGATCAGCTCCTCGCCGGGCCTGCGGCTGCACGACCCTCAA i nomLeu3.chr11 C 0 C 0 e macNem1.NW_012013899v1 22850 2078 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545740 547 - 16742782 I e rheMac8.chr6 179799900 104 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=1622.000000 s hg38.chr3_KI270934v1_alt 147064 9 + 163458 actagaatc s panTro5.chr3 2611411 9 - 202621043 actagaatc i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2910199 9 - 123690457 ACTGGAACA i nomLeu3.chr11 C 0 C 0 e macNem1.NW_012013899v1 22850 2078 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545740 547 - 16742782 I e rheMac8.chr6 179799900 104 - 180051392 I e gorGor5.CYUI01015759v1 39911 11 + 880730 I e panPan2.chr3 204924092 10571 + 205426864 M a score=204309.000000 s hg38.chr3_KI270934v1_alt 147073 531 + 163458 -----------------------------------------------tcagctcct-cccaagtcttcagctgcacgaccctcaaactagaacctcagctcctccctgagtcttcagctgcatgacccttaatctagaacatcagctcctccccgagtcttcagctgcacgaccctcaatctagaacatcagctcctctccaggtctgcagctgcaagaccttcaaactagaacatcagctcctctccaggtctgcagctgcaagaccttcaaactagaacatcagctcctccccgagtcttcacctgcatgaccctcaaactagaacatcagctcctctccaggtctccagctgcacgaccctcaaagtagaacatcagctcctctccgggtctgcagctgcaa-----------------------------------------------gatcctc-aaactagaacatcagctcctctccaggtctgcagctgcaagaccctcaatcta-----------------------------------------------gaacatcagctcctctccaagtgtgcagctgcacgaccctcaatctagaacatcagctcctctccaggtctgcagctgcaagaacctcaaactagaacatcagctcctctccag s panTro5.chr3 2611420 578 - 202621043 -----------------------------------------------tcagctcct-cccgagtcttcagctgcacgaccctcaaactagaacgtcagctcctccctgagtcttcagctgcatgacccttaatctagaacatcagctcctccccgagtcttcagctgcacgaccctcaatctagaacatcagctcctctccaggtttgcagctgcaagaccatcaaactacaacatcagctcctctccaggtctgcagctgcaagaccctcaaactagaacatcagctcctccccgagtcttcacctgcatgaccctcaaactagaacatcagctcctctccaggtctccagctgcacgaccctcaaagtagaacatcggctcctctccaggtctgcagctgcaagaccatcaatctagaacatcagctcctctccaagtgtgcagctgcacgaccctc-aatctagaacatcagctcctctccaggtctgcagctgcaagaccatcaatcta-----------------------------------------------gaACATCAGCTCCTCTCCAAGTGTGCAGCTGCACGACCctcaatctagaacatcagctcctctccaggtctgcagctgcaagaacctcaaactagaacatcagctcctctccag i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 39922 532 + 880730 -----------------------------------------------TCATCTCCTCCCCAAGTCTACAGCTGCAAGACCctcaaactagaacatcagctcctctccgggtcagcagctgcaagaccctcaaactagaacatcagctcctccgcaggtctgcagctgcaagatactcaaactagaacatcacctcctctccaggtctgcagctgcatgaccctcaaataagaacatcagctcctctccaggtctccagctgcacgaccctcaaagtagaacatcagctcctctctggctctgcagctccaagatcctcaaacgagaacatcagctcctctccaggtctgcagctgcaccaccctcaaactagaacatcagctcctctccgggtctgcagctACAA-----------------------------------------------GACCCTCAAAACTAGAACATCAGCTCCTCTCCAGATCTGCAGCTGCAAGACCCTCAATCTA-----------------------------------------------GAACCTCAGctcctc-cctggtcttcagctgcatgacccccaaattagaacctcagctcctccccgagtcttcagctgcacgaccctctatctagaACATCAGCTCCTCTCCAG i gorGor5.CYUI01015759v1 I 11 I 237 s nomLeu3.chr11 2910208 625 - 123690457 CCAGCTCCTCCGCTGGTCTGCGGATGCAAGACCCTCAAACCGGAACATCAGCTCCCACGGAGGTCTGCGGCTGCACGACCctcaaattggaaaatcagcgcctccctgggtctgcggctgcaggaccctcaaactggaacatcacctcctcccctggtctgcgtttgcacgaccctcaaactggaacatcagctcttccctggatctgcgggtacacgaccctcaaactggaacatcagctcctcccctggaatgcagctgcacgaccctcaaactggaatatctgctcttcccggggtctgcggctgcactaccctcaaactggaacattggctcctccccgggttttcggctgcacgaacctcaaactgaaacaccggcgcctctcagggtctttggctgcaa-----------------------------------------------gatcctc-aaactacaccatcggctcctctccaggtctgcggctGCACGACCTTCAATGTAGAACATTGGCACCTAACCGGGTCTGTGGCTACAAAACCCTCAAACAGGAACATCCGCGCCTCCACGGGTCTGCGGCTGCAAGACCCTGAAACCGGAACATCAGCTCCTCCCT-GGTCCGCGGCTGCAAGAACctcaaaccggaacatcagctcctccaagg i nomLeu3.chr11 C 0 C 0 e macNem1.NW_012013899v1 22850 2078 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545740 547 - 16742782 I e rheMac8.chr6 179799900 104 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=105925.000000 s hg38.chr3_KI270934v1_alt 147604 262 + 163458 gtctccagctgcacgaccctcaaactagaacatcagctcctctccgcgtctgcagctccacgaccctcaatctagaacatcagctcctccccgggtcttcagctgcacgaccctcaaactagaacatcagctcctccctgggtctgcagctggaagatccactaactagaacatcaactcctgtctaggtttccagctccatgaccctcaatcaagattatcagctcctctctgagtccccagctGAAAGACCCTCAACGTg s panTro5.chr3 2611998 262 - 202621043 gcctccagctgcacgaccctcaaactagaatatcagctcctctccgggtctgcagctccacgaccctcaatctagaacatcagctcctccccgggtcttcagctgcacgaccctcaaactagaacatcagctcctccctgggtctgcagctggaagatccactaactagaacatcaactcctgtctaggtctccagctccatgaccctcaatcgagattatcagctcctctctgagtccccagctGAAAGACCCTCAACGTG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 40691 262 + 880730 gtctccagctgcaggaccctcaatctagaacatcagctcctctccaggtctgcagctgcacgaccctcaatctagaACATCAGCTCCACCCCGAGTCTCCAGCTGCAGGACCctcaatctagaacatcagctcctctccggatctgcagctgctagacactcaaactagaatatcaacttctgtccaggtctccagttccgtgaccctaaatctagaacatcagctcctctctgagtctccaactGAAAGACCCTCAACGCG i gorGor5.CYUI01015759v1 I 237 C 0 s nomLeu3.chr11 2910833 254 - 123690457 gtctgtggctgcaagaccctcaaaccggaacatcagctcctccccgggtccgcggcttcaagaccctcaaacaagaacatcagctcctccccgggtccgcagctGCAAGACCCTGAAACCGGAACATCAGCTCCTCCCCAGGTCCATGGCTGCAGGACCGTCCaactggaacatcagctccttcacgggtctgtaa------gaccctcaaacccgaatatcagctcctccctg-gtctgcagctgcgagaccctcaaagc- i nomLeu3.chr11 C 0 C 0 e macNem1.NW_012013899v1 22850 2078 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117216828 1040 - 159171411 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545740 547 - 16742782 I e rheMac8.chr6 179799900 104 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=56818.000000 s hg38.chr3_KI270934v1_alt 147866 95 + 163458 aacaacatcagctcctcccgaagtcctcaactgcatgaccctca------aactacaacatcagctcctccccgagtattcagctgcatgaccctcaatct s panTro5.chr3 2612260 95 - 202621043 AACAACATCAGctcctcctgaagtcctcaactgcatgaccctca------aactacaacatcagctcctccccgagtcttcagctgcatgaccctcaatct i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 40953 95 + 880730 AACAACATCAGCTCCTCCCCGGGTCTGCAGCTGCACGACCctca------aactagaacatcagctcctccccgggtctgcagctgcacgaccctcaaact i gorGor5.CYUI01015759v1 C 0 I 425 s nomLeu3.chr11 2911087 94 - 123690457 -agaacatcagctcctccccaggtctgcagctgcaatactccga------aacgggaacatcagctcctccccgggtctgcggctGCAAGACCCCCAATCC i nomLeu3.chr11 C 0 C 0 s calJac3.chr5 117215788 100 - 159171411 AGCAGCACCGGctcctccccagattc-cagctcctcgaccctcaaacatcaactacagtgccagctcctccccgggtctacagctccacaaacctcaaact i calJac3.chr5 T 1040 C 0 e macNem1.NW_012013899v1 22850 2078 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545740 547 - 16742782 I e rheMac8.chr6 179799900 104 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=66635.000000 s hg38.chr3_KI270934v1_alt 147961 114 + 163458 ------agaacatcagctcctctctgactctgtagctggaagatccactaactagaacatca------gctcctgtctgggtctccagctccatgaccctta------atcaagaTTATCAGCTCCTCCCTG s panTro5.chr3 2612355 114 - 202621043 ------agaacatcagctcctctctgactctgcagctggaagatccactaactagaacatca------gctcctgtctgggtctccagctccatgaccctta------atcaagaTTATCAGCTCCTCCCTG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 41473 114 + 880730 ------agaacatcagctcctccctgggtctgcagctggaagatccactaactagaacatca------gctcctgtccgggactccagctccatgaccctca------gtcaagattatcagctcctccctg i gorGor5.CYUI01015759v1 I 425 C 0 s nomLeu3.chr11 2911181 114 - 123690457 ------GGAACATCAGTTCCTCCCCGGGTCTGCGGCTGCAAGACCCTCAAACCAGAACTTCA------GCTCCTCCCCGGGTCCGCAGATGCAAGACCCTCA------AACCGGAATATCAGCTCCTCCACG i nomLeu3.chr11 C 0 I 846 s calJac3.chr5 117215888 132 - 159171411 acagctgcagcaccagctcctccccgggtctccagctccacaatcctcaaactacaacagcagcaccggctcctccccgggtctccagcttcctgaccctcaaacatcaacagcaacactagctcctcccca i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 22850 2078 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545740 547 - 16742782 I e rheMac8.chr6 179799900 104 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=50784.000000 s hg38.chr3_KI270934v1_alt 148075 103 + 163458 AGTCCCCAGCTGAAAGACCCTCAACACGAA----CAACATCAGctcctcccaaagtcctcaactgcatgaccctcaaact------acaacatcagctcctccccgagtcttc s panTro5.chr3 2612469 103 - 202621043 AGTCCCCAGCTGAAAGACCCTCAACACGAA----CAACATCAGCTCCTCCCAAAGTCCTCAACTGCATGACCCTCACACT------ACAACATCAGctcctccccaagtcttc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 41587 103 + 880730 agtctccacctgaaagaccctcaatgcgaa----caacatcagctcctccctgagtcttcagctgcacgaccctcaatct------agaagatcagctcctccccaagtcttc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2912141 101 - 123690457 GGTCTGCAGCTGCAAGACCctaaaaccgg------aacatcagctcctccccgggtctgcgcctgcaagaccctgaaacc------ggaacatcagctcctccccgggtgtgt i nomLeu3.chr11 I 846 C 0 s calJac3.chr5 117216020 113 - 159171411 ggtctccagattcatgatcctcaaattacagcagcagcaccggctcctccctgggtctccagctcaacaaCTCTCAGACTTGAGAGGCAGCACTGGCTCCTCCCGAAGCCTCC i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 22850 2078 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545740 547 - 16742782 I e rheMac8.chr6 179799900 104 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=14173.000000 s hg38.chr3_KI270934v1_alt 148178 21 + 163458 agctgcatgaccctctatcta s panTro5.chr3 2612572 21 - 202621043 agctgcatgaccctctatcta i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 41690 21 + 880730 agctgcaacaatctaaaacta i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2912242 21 - 123690457 ggctgcaagacccttaaactg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179800004 21 - 180051392 agctgcacggccctccaactg i rheMac8.chr6 I 104 C 0 s calJac3.chr5 117216133 21 - 159171411 AGCTCCCCAACCCTAAAACTA i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 22850 2078 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545740 547 - 16742782 I e panPan2.chr3 204924092 10571 + 205426864 M a score=52423.000000 s hg38.chr3_KI270934v1_alt 148199 44 + 163458 ------gaacatcagctcctccccgggtctgcagctgcac-gaccctcaat s panTro5.chr3 2612593 44 - 202621043 ------gaacatcagctcctccccaggtctgcagctgcac-gaccctcaat i panTro5.chr3 C 0 I 994 s gorGor5.CYUI01015759v1 41711 44 + 880730 ------gaacataagctcctccctgagtctccagctGAAA-GACCCTCAAC i gorGor5.CYUI01015759v1 C 0 I 3 s nomLeu3.chr11 2912263 44 - 123690457 ------gaacatcagctcctccctgggtctgcggctgcaa-gacgcccaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179800025 44 - 180051392 ------gaatatcagctccccgccgggtctccagctgcat-ggccctcaaa i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 24928 45 + 100774 ------gaacatcagctgcccctcgggtctccagctgcacagaccttaaaa i macNem1.NW_012013899v1 I 2078 C 0 s calJac3.chr5 117216154 49 - 159171411 CAACAGCAGCACCAGCTCCTCCCTGGATCTCCAGCT-CAC-AACCTTCAAA i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545740 547 - 16742782 I e panPan2.chr3 204924092 10571 + 205426864 M a score=291789.000000 s hg38.chr3_KI270934v1_alt 148243 274 + 163458 ctagaacatcagctcctccccgggtct-gcagctgcacgaccctcaatctag---------aacatcagctcctccccgggtctgcagctgcacgaccctcaatctagaa------catcagctcctccccgggtctgcagctgcacgaccctcaatctagaa------catcagctcctccccgggtctgcagctgc-acgaccctcaatctagaa------catcagctcctccccgggtctgcagctgcacgaccctcaatctaga-------------------------------------------------acatcagctcctccccgggtctgcagctgcacga s panTro5.chr3 2613631 274 - 202621043 ctagaacatcagctcctctccaggtct-gcagctgggagaccctcaaactag---------aacatcagctcctccccgggtctgcaggtgcacgaccctcaatctagaa------catcagctcctctccgggtctgcagctgcacgacactcaaactagaa------catcagctcctccccgggtctgcagctgc-atgacacttaatctagaa------catcagctcctccccgggtctgcagctgcacgacactcaaactaga-------------------------------------------------acatcagctcctccccgtgtctgcagctgcacga i panTro5.chr3 I 994 C 0 s gorGor5.CYUI01015759v1 41758 323 + 880730 GAACAACATCAGctcctccccgagtcc-tcaacagcgcgaccctcaaactac---------aacatcagctcctccccgagtcttcagctgcatgaccctcaatctagaa------catcagctcctctccgggtctgcagctgcaagaacctaaaactagaa------catcagctcctccttgggtctgcagctgg-aagatccactaactagaa------catcagctcctgtccgggtctccagctccatgaccctcaatcaagattatcagctcctctctgagtctccagctGAAAGACCCTCAACGCGAACAATATCAGctccaccccgagtcctcaactgcacga i gorGor5.CYUI01015759v1 I 3 C 0 s nomLeu3.chr11 2912307 273 - 123690457 ccagaacatcagctcattcccgggtc--gcagctgcaagaccctcaaaccag---------aacatcagctccttcccgggtc-gcagctgcaagaccctcaaactggaa------catcagctcctccacggctccgcggctgcaatactctgaaaccggaa------catcagcttctccccggttctacggctgcaaagaccctcaaaccggaa------catcggctcctccccgggtctgcggctgcaagatcctcaaaccgga-------------------------------------------------acatcagctcctccccaggtcttcggctgcaaga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179800069 272 - 180051392 ttggaacatcagctca-gcccggggct-ccagctgcacggccctcaaactcg---------aacattggctccccac-ggatctacagctgcacggccctcaaactggaa------catcagctccctgccaggtatccagctgcacggccctcaaaatggaa------catcagctccccgccgggtctccagctgc-acggccctcaaactggaa------catcagctgcccctcgggtctccagctgcacggccctcaaactgga-------------------------------------------------acatcagctgcccctcgggtctccagctgcacgg i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 24973 273 + 100774 ctggaacatcggctcc-ccctggatct-acagcagcacagccctcaaactgg---------aacatcagctccccgctgggtctccagctgcacggccctcaaactggaa------catcagctccctgccaggtatcctgcttcacggccctaaaaatggaa------catcagctccccgtagggtctccagctgc-atggccctcaaactggaa------catcagctgcccctcgggtctccagctgcacggccctcaaactgga-------------------------------------------------acatgagctccccgctgggtctctagctgcacgg i macNem1.NW_012013899v1 C 0 C 0 s calJac3.chr5 117216203 310 - 159171411 CTTCAAC-TGTGCTCCTCCCTGAGGCCATCATCTCCATGACCCTCAGAATTGCATGGTGATAGCACCGGCTCCTCCCTGGATCTCCAGCTCAATGACTCTCAGACTTGAAAGGCAGCATCGGCTCCTCACCAAGGCTCCAGCTCCAAGACCCTCACACTAGAACAGCAGCAGCAGCTGCACCTTGGGTCTCCAGCTCC-ACCACCCTCAAAGAAGAACAGCAGCACCGGctcctccctgggtctccagctccaccaccctcagatctgaataccagta----------------------------------------gcaccagctcctgtctgggtctccagttctatga i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1445207 13243 + 91010382 I e cerAty1.NW_012009470v1 545740 547 - 16742782 I e panPan2.chr3 204924092 10571 + 205426864 M a score=48880.000000 s hg38.chr3_KI270934v1_alt 148517 29 + 163458 ccctcaatctagaa------catcagctcctcccc s panTro5.chr3 2613905 29 - 202621043 cactgaaactagaa------catcagttcctcccc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 42081 29 + 880730 ccctcaaactacaa------catcagctcctcccc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2912580 29 - 123690457 cccccaaactagaa------catcggctcctctcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179800341 29 - 180051392 ccctcaaactggaa------catgagctcctctcc i rheMac8.chr6 C 0 I 29 s macNem1.NW_012013899v1 25246 29 + 100774 ccctccaactggaa------catgagctcctctcc i macNem1.NW_012013899v1 C 0 I 29 s chlSab2.chr4 1458450 28 + 91010382 ccctcaaactggaa------catcagctcccccc- i chlSab2.chr4 I 13243 C 0 s calJac3.chr5 117216513 35 - 159171411 ccttcaaactagaacaacggcaccagttcctccca i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e cerAty1.NW_012009470v1 545740 547 - 16742782 I e panPan2.chr3 204924092 10571 + 205426864 M a score=26568.000000 s hg38.chr3_KI270934v1_alt 148546 34 + 163458 gggtctgcagctgcacgaccctcaatctagaaca--------- s panTro5.chr3 2613934 34 - 202621043 gggtctgcaggtgcatgaccctcaatctagaaca--------- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 42110 34 + 880730 gagtcttcagctgcatgaccctcaatctagaaca--------- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2912609 34 - 123690457 acgtctgcagctgcaacatcctcaaactggaaca--------- i nomLeu3.chr11 C 0 C 0 s chlSab2.chr4 1458478 34 + 91010382 agatctacagctgcacggccctcaaactggaaca--------- i chlSab2.chr4 C 0 C 0 s calJac3.chr5 117216548 43 - 159171411 gagtctcaagctccacgaccctcagacctaaacaaaaacaaca i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 25275 29 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e cerAty1.NW_012009470v1 545740 547 - 16742782 I e rheMac8.chr6 179800370 29 - 180051392 I e panPan2.chr3 204924092 10571 + 205426864 M a score=126666.000000 s hg38.chr3_KI270934v1_alt 148580 101 + 163458 tcagctcctccccgggtctgcagctg-----cacgaccctcaatct---agaa------catcagctcctccccgggtctgcagctgcacgaccctcaaggtagaacatcagctc s panTro5.chr3 2613968 101 - 202621043 tcagctcctctctgggtctgcagctg-----catgacactcaaact---agaa------catcagctcctccccgggtctgcagctgcaggaccctcaaagtagaacatcagctc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 42144 100 + 880730 tcagctcctctccggatctgcagctg-----caagaccttcaaact---agaa------catcagctcctctcc-ggtctgcagctGCAGGGCCCTGAAGGTAGAACATCAGCTC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2912643 101 - 123690457 tcagctcctcaccgggtctccagcta-----cacggccctcaatct---acaa------catcaatgcctctccgggtctgcagCTGCAGGGACCTCACGGTAGAACATCAGCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179800399 87 - 180051392 ccagctcctcctgggttctacagctg-----tgcaaccctcaaactaaagaaa------cgccagctcctctctgggtctgcagctgcatgaacctca----------------- i rheMac8.chr6 I 29 C 0 s macNem1.NW_012013899v1 25304 87 + 100774 ccagctcctcctgggttctacagctg-----tgcaaccctcaaactaaagaaa------caccagctcctctctgggtctgcagccgcatgaacctca----------------- i macNem1.NW_012013899v1 I 29 C 0 s chlSab2.chr4 1458512 100 + 91010382 tcagctccctgctgggtctccagcta-----cacagccctcaaact---ggaa------cgtcggctcagccctggg-ctccagctgcacggccctcaaactggaacatcagctc i chlSab2.chr4 C 0 I 1584 s calJac3.chr5 117216591 110 - 159171411 ctggctcctccctgggtctccagcttcaacccaAGACCCTCAAACA---AGAACAGCAGCACCAGCTCCTCCCCAGGGCTCCAGCTCCACCATcctcagacttaaacaataac-- i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e cerAty1.NW_012009470v1 545740 547 - 16742782 I e panPan2.chr3 204924092 10571 + 205426864 M a score=8890.000000 s hg38.chr3_KI270934v1_alt 148681 15 + 163458 ttccccgagctaaaa s panTro5.chr3 2614069 15 - 202621043 ttcCCCGAGCTAAaa i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 42244 15 + 880730 CTCCCCGAGCTAGAA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2912744 15 - 123690457 CTCCCCGAGCTAGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179800486 8 - 180051392 -------aactagat i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 25391 8 + 100774 -------aactagat i macNem1.NW_012013899v1 C 0 C 0 s calJac3.chr5 117216701 8 - 159171411 -------aaccgcag i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e manLeu1.NW_012109696v1 57047 3769 - 6207128 I e chlSab2.chr4 1458612 1584 + 91010382 I e cerAty1.NW_012009470v1 545740 547 - 16742782 I e panPan2.chr3 204924092 10571 + 205426864 M a score=23695.000000 s hg38.chr3_KI270934v1_alt 148696 11 + 163458 cacctctccca s panTro5.chr3 2614084 11 - 202621043 cacctctccca i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 42259 11 + 880730 CACCTGTCCCA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2912759 11 - 123690457 CACCTCTCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179800494 10 - 180051392 cacctctccc- i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 25399 10 + 100774 cacctctccc- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 546287 10 - 16742782 cacctctccc- i cerAty1.NW_012009470v1 I 547 C 0 s chlSab2.chr4 1460196 10 + 91010382 cacctctccc- i chlSab2.chr4 I 1584 C 0 s manLeu1.NW_012109696v1 60816 10 - 6207128 cacctctccc- i manLeu1.NW_012109696v1 I 3769 C 0 s calJac3.chr5 117216709 8 - 159171411 ctcctctg--- i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012116910v1 845602 185 - 1687011 I e panPan2.chr3 204924092 10571 + 205426864 M a score=988352.000000 s hg38.chr3_KI270934v1_alt 148707 257 + 163458 cctggatctccagctccacgagtctcaca---gaacagccacactggctccttcattgtcttcagctccacaaCCTAAGACATCAGTGGGAGCACTGGCTCCTCCCTGGACCTCCAGCTCAACGACTCTCATAGAC---TTAAAAGGCAGCACCTGCTCCTCCCCAAGGCTCCATCTCCACCACCCTCAGATTTGAACAGCGGTAGCACCACCTCCTCTCCAGGTCTTCAGCCCCATGTCCCTCCCTGAACAATCCCTTCTCA s panTro5.chr3 2614095 257 - 202621043 cctggatctccagctccacgagtctcaca---gaacagccacactggctccttcgttgtcttcagctccacaaCCTAAGACATCAGTGGGAGCACCGGCTCCTCCCTGGACCTCCAGCTCAACGACTCTCATAGAC---TTAAAAGGCAGCACCTGCTCCTCCCCAAGGCTCCATCTTCACCACCCTCAGATTTGAACAGCGGTAGCACCACCTCCTCTCCAGGTCTTCAGCCCCACGTCCCTCCCTGAACAATCCCTTCTCA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 42270 257 + 880730 CCTGGATCTCCAGCTCCACGAGTCTCACA---GAACAGCCACACTGCCTCCTTCATTGTCTTCAGCTCCACAACCTAAGACATCAGTGGCAGCACCGGCTCCTCCCTGGACGTCCAGCTCAACGACTCTCATAGAC---TTAAAAGGCAGCACCTGCTCCTCCCCAAAGCTCCATCTCCACCACCCTCGGATTTGAACAGCGGTAGCAACAGCTCCTCTCCAGGTCTTCAGCCCCACGTCCCTCCCTGAACAATCCCTTCTCG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2912770 254 - 123690457 CCT-GATCTCCAGCTCCACGACCCTCACA---CAACAGCCACACTGGCTCCTTCATTGTCTTCAGCTCCTCAACCTAAGACATCAGCGGCAGCACCGGCTCCTCCCTGGACGTCCAGCTCAATGACTCTC--AGAC---TTAAAGGGCAGCACCTGTTGCTCCCCAAGGCCCCATCTCCACCACCCTCAGATTTGAACAGCGGTAGCACCAGCTCCTCTCCAGGTCTTCAGCCCCACGACCCTCCCGGAACAATCCCTTCTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179800504 261 - 180051392 cctggatctccagctccacgaccctcacagaggaatagccacaccggctccttcactgtcttcagctccacaaCCTAAGACATCAGTGGCAGCACCAGCTCCTCCGTGGACCTCCAGCTCAACGACTCTC--AGGCAGACTTAAAGGCAGCGTCGGctcctccccaaggctccagctccaccaccttcagatttgaacagcggtagcaccagctcctgtccgggtcttcagccccacaaCCCTCCCTGAACAATCCCTTCTCA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 25409 261 + 100774 cctggatctccagctccacgaccctcacagaggaatagccacaccggctccttcactgtcttcagctccacaaCCTAAGACATCAGTGGCAGCACCAGCTCCTCCGTGGACCTCCAGCTCAACGACTCTC--AGGCAGACTTAAAGGCAGCGTCGGctcctccccaaggctccagctccaccaccttcagatttgaacagcggtagcaccagctcctgtccgggtcttcagccccacaaCCCTCCCTGAACAATCCCTTCTCA i macNem1.NW_012013899v1 C 0 M 4490 s cerAty1.NW_012009470v1 546297 261 - 16742782 cctggatctccagctCCACGACCCTCACAGAGGAATAGCCACACTGGCTCCTCCACTGTCTTCAGCTCCACAACCTAAAACATCAGTGGCAGCACCAGCTCCTCCGTGGACCTCCAGCTCAACGATTCTC--AGGCAGACTTAAAGGCAGCGTCGGCTCCTCCCCAAGGCTCCAGCTCCACCACCCTCAGATTTGAACAGCGGTAGCACCAGCTCTTGTCCGGGTCTTCAGCCCCACAACCCTCCCTGAACAATCCCTTCTCA i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1460206 255 + 91010382 cctggatctccagctCCACGACCCTCACAGAGGAACAGCCACACCAGCTCCTTCACTGTCTTCAGCTCCACAACCTAAGACATCAGTGGCAGCACCAGCTCCTCCGTGGACCTCCAGCTCAACGACTCTT--AGAC---TTAAAAGGCAGCGTCGGctcctccccaaggctccagct---ccaccctcagatttgaacagcggtagcaccagctcctgcccgggtcttcagccccacaaCCCTCCCTGAACAATCCCTTCTCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 60826 261 - 6207128 cctggatctccagctCCACGACCCTCACAGAGGAATAGCCACACTGGCTCCTTCACTGTCTTCAGCTCCACAACCTAAGACATCAGTGGCAGCACCAGCTCCTCCGTGGACCTCCAGCTCAACGATTCTC--AGGCAGACTTAAAGGCAGCGTTGGCTCCTCCCCAAGGCTCCAGCTCCACCACCCTCAGATTTGAACAGCGGTAGCACCAACTCCTGTCCGGGTCTTCAGCCCCACAACCCTCCCTGAACAATCCCTTCTCA i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 845787 258 - 1687011 cctggatctccggctCCACGACCCTCACAGAGGAACAGCCACACCGGCTCCTTCACTGTCTTCAGCTCCACAACCTAAGACATCAGTGGCAGCACCAGCTCCTCCGTGGACCTCCAGCTCAACGACTCTC--AGAC---TTACAAGGCAGCGTTGGCTCCTCCCCAAGGCTCCAGCTCCACCACCCTCAGATTTGAACAGCGGTAGCACCAGCTCCTGTCCGGGTCTTTAGCCCCACAACCCTCCCTGAACAATCCCTTCTCA i colAng1.NW_012116910v1 I 185 C 0 s calJac3.chr5 117216717 208 - 159171411 --tgggtctccagctccacgactctcaaa---caaaaacaccaccactcctccctgggtttccagctccatgaccctcga-actag-aacaacact-gcacctccctgggtctccagctcgacaaccctc--cccc---tagaACAGCAGCA------CTTCCTTGCACCTCCAGCTCAACAACTCTCATACTTGAAAGACAGCA------------------------------------CCTCATTACCAATCCCTTCTCA i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e panPan2.chr3 204924092 10571 + 205426864 M a score=624865.000000 s hg38.chr3_KI270934v1_alt 148964 177 + 163458 TGAAATTCAGCAGTCAAGAAATCTGCAGCGGAAGTAAATGAATAAACGTTTTGTTTTCAAATTGATATCTCTTTTATGTTCATG------AATTAACTTTTCTACTTTCCATTAGCCTTGCAATCTACTTATGTCC-AAGGTGAAACAGAAACACACCATTTGAAATCACGTTTAAAAACTTAG s panTro5.chr3 2614352 177 - 202621043 TGAAATTCAGCAGTCAAGAAATCTGCAGCGGAAGTAAATGAATAAATGTTTTGTTTTCAAATTGATATCTCTTTTATGTTCATG------AGTTAACTTTTCTACTTTCCATTAGCCTTGCAATCTACTTATGTCC-AATGTGAAACAGAAACACACCATTTGAAATCACGTTTAAAAACTTAG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 42527 183 + 880730 TGAAATTCAGCAGTCAAGAAAACTGCAGCGGAAGTAAATGAATAAATGTTTTGTTTTCAAATCGATGTCTCTTTTATGTTCAGGCAAGTCAGTTAACTATTCTACTTTCCATTAATCTTGCAATCTACTTATGTCC-AATGTGAGATAGAAACACACCATTTGAAAACACGTTTAAAAACTTAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2913024 177 - 123690457 TGAAATTCAGCAGTCAACAAAACTGCAGCTGAAGTAAATGAATAAATGTTTTGTTTTCAAATCGGTATCTCTTTTATGTTCATC------AGTTAACTTTTCTATTTTCCATTAGCCTTGCAATCTACTTATGCCC-AATGTGAAACAGAAACGCACCATTTGAAATCACGTTTAAAAACTTAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179800765 177 - 180051392 CGAAATTCAGCAGTCAAGAAAACTGCAGCGGAAGTAAATGAATAAATGTTTTGTTTTCAAATCTGTATCTCTTTTATGTTCATG------AGTTAACTTTTCCACTTTCCATTAAACTTGTAATCTACTTATGTCC-AATGTGAGATAGAAACACAGCATTTGAAATGACGTTTAAAAACTTAG i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 546558 177 - 16742782 CGAAATTCAGCAGTCAAGAAAACTGCAGCGGAAGTAAATGAATAAATGTTTTGTTTTCAAATCGATATCTCTTTTATGTTCATG------AGTTAACTTTTCCACTTTCCATTAAACTTGTAATCTACTTATGTCC-AATGTGAGATAGAAACACAGCATTTGAACTGACGTTTAAAAACTTAG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1460461 175 + 91010382 CGAAATTCAGCAGTCAAGAAAACTGCAGCGGAAGTAAATGAATAAATGTTTTGTTTTCAAATCGATGTATCTTTTATGTTCATG------ACTTAACTTTTCCACTTTCCATTAACCTTGTAATCTACTTATGTCC-AATGTGAGAC--AAACACACCAGTTGAAATGACGTTTAAAAACTTAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 61087 177 - 6207128 CGAAATTCAGCAGTCAAGAAAACTGCAGCAGAAGTAAATGAATAAATGTTTTGTTTTCAAATCGATATCTCTTTTATGTTCATG------AGTTAACTTTTCCACTTTCCATTAAACTTGTAATCTACTTATGTCC-AATGTGAGACAGAAACACACCAGTTGAAATGACGTTTAAAAACTTAG i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 846045 177 - 1687011 CGAAATTCAGCAGTCAAGAAAACTGCAGCCGAAGTAAATGAATAAATGTTTTGTTTTCAAATCGATGTATCTTTTATGTTCATG------AGTTAACTTTTCTACTTTCCAGTAACCTTGTAATCTACTTATGTCC-AATGTGAGATAGAAACACAGCATTTGAAATGACGTTTAAAAACTTAG i colAng1.NW_012116910v1 C 0 I 305 s calJac3.chr5 117216925 184 - 159171411 TGAAATTCAGCAGTCAAGAAAACTGCAGAGGAAGTAAATGAATAAATGTTTTGCTTTCAAATCGATGTTTCTTTTATGTTCACACGAGTCAGGAAACTTTTCTACTTGCTGTCAACCTTGCAACCTACCTATGTCCTAATGTAAGATAGAAATCCACCATTCGAAATGACCTTTAAAAACTTAG i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 25670 4490 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e panPan2.chr3 204924092 10571 + 205426864 M a score=10799.000000 s hg38.chr3_KI270934v1_alt 149141 6 + 163458 TAATGT s panTro5.chr3 2614529 6 - 202621043 TAATGT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 42710 6 + 880730 TAATTT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2913201 6 - 123690457 TAGTAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179800942 6 - 180051392 AAATAT i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 546735 6 - 16742782 AAATAT i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1460636 6 + 91010382 AAATAT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 61264 6 - 6207128 AAATAT i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 117217109 6 - 159171411 CAATAT i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 25670 4490 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012116910v1 846222 305 - 1687011 I e panPan2.chr3 204924092 10571 + 205426864 M a score=773838.000000 s hg38.chr3_KI270934v1_alt 149147 238 + 163458 TTTTCAATAAAATC--ATCACACAGCTGTAGACATGATCTTATTTCTCTCTGCCTGTGCAGAAGTCTTATGAAAATTCAAACTATGAATTTACTTTGTTGAGATTCCCAGAATACACATTAATCCCAACTGTTACTCCCCTCCTTAAAATCTTTTAACACATTCCCATCACCTGAGCATAAATGCCAGCTCCCATCCACAGCCCGAAGTGCCCAGCACGGCC---CTG------------------------------------------------------CCCTCTGCCCTGGTC s panTro5.chr3 2614535 238 - 202621043 TTTTCAATAAAATC--ATCACACAGCTGTAGACACGATCTTATTTCTCTCTGCCTGTGCAGAAGTCTTATGAAAATTCAAACTATGAATTTACTTTGTTGAGATTCCCAGAATACACATTAATCCCAACTGTTACTCCCCTCCTTAAAATCTTTTAACACATTCCCATCACCTGAGCATAAATGTCAGCTCCCATCCACAGCCCAAAGTGCCCAGCACGGCC---CTG------------------------------------------------------CCCTCTGCCCTGGTC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 42716 285 + 880730 TT----AAAATATG--ATCACACAGCTGTAGACACGATCTTATTTCTCTCTGCCTTTGCAGAAGTCTTATGAAAATTCAAAC--TGAATTTACCGTGTTGAGATTCCCAGAATACACGTTAATCCCAAATGTTACTCCCCTCCTTAAAATCTTTTAACATATT-CCATCACCCAAGCATAAATGCCAGCTCCCATCCACAGCCCAAAGTGCCCAGCACGGCC---ctgccctctgccctcgcctatggtctcctctctcgtgcccGGCTCGGCCCTCTCcacccctctgccctggtc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2913207 238 - 123690457 TTTTACATAAAATC--ATCACACAGCTGTAGACGCGATCTTATTTCTCTCTCCCTGTGCAGAAGTCTTATGAAAATTCAAACTATGAATTTACTTTGTTGAGATTCCCAGAATACACATTAATCCCAACTGCTATTCCCCTCCTTAAAATCTTTTAACATATTCCCATCACCTGAGCATAAATGCCAGCTCCCATCCACAGCCCAAAGTGCCCGGCACGGCC---CTG------------------------------------------------------CCCTCTGCCCTGGTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179800948 237 - 180051392 -TTTTAATATAATC--AACACACAGCCGTAGACGCGATCTTATTTCTCTCTGCCTGTACAGAAGTCTTGTGAAAATTAAAACTATGAATTTACTTTGTTGAGATTCCCAGAATACACATTAATCCCAAATGTTACTCCCCTCCTTAAAATTTTTTAACATGTTCCCATCACTCAAGCATAAATGCCAGCTCCCATTCACAGCCCAAGGTATCCAGGATGGCC---CTG------------------------------------------------------CCCTCTGCCCTGGTC i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 546741 237 - 16742782 -TTTTAATATAATC--AACACACAGCCGTAGACGTGATCTTATTTCTCTCTGCCTGTACAGAAGTCTTGTGAAAATTCAAATTATGAATTTACTTTGTTGAGATTCCCAGAATACACATTAATCCCAAATGTTACTACCCTCCTTAAAATCTTTTAACATGTTCCCATCACTCAAGCATAAATGCCAGCTCCCATTCACAGCCCAAGGTGTCCAGGATGGCC---CTG------------------------------------------------------CCCTCTGCCCTGGTC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1460642 237 + 91010382 -TTTTAATATAATC--AACACACAGCCGTAGACGCGATCTTATTTCTCTCTGCCTGTACAGAAGTCTTGTGAAAATTCAAACTATGAATTTACTTTGTTGAGATTCCCAGAATACACATTAATCCCAAATGTTACTCCCCTCCTTAAAATCTTTTAACATGTTCCTATCACTCGAGCATAAATGCCAGCTCCCATTCACAGCCCAAGGTGTCCAGGATGGCC---CTG------------------------------------------------------CCCTCTGCCCTGGTC i chlSab2.chr4 C 0 I 2373 s manLeu1.NW_012109696v1 61270 237 - 6207128 -TTTTAATATAATC--AACACACAGCCGTAGACACGATCTTATTTCTCTCTGCCTGTACAGAAGTCTTGTGAAAATTCAAACTATGAATTTACTTTGTTGAGATTCCCAGAATACACATTAATCCAAAATGTTACTACCCTCCTTAAAATCTTTTAACATGTTCCCATCACTCAAGCATAAATGCCAGCTCCCATTCACAGCCCAAGGTGTCCAGGATGGCC---CTG------------------------------------------------------CCCTCTGCCCTGGTC i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 846527 241 - 1687011 TTTTTAATATAATC--AACACACAACCGTAGACGTGATCTTATTTCTCTCTGCCTGTGTAGAAGTCTTGTGAAAATTCAAACTATGAATTTACTTTGTTGAGATTCCCAGAATACACATTAATCCCAAATGTTACTCCCCTTCTTAAAATCTTTTAACACGTTCCCATCACCCCAGCATAAATGCCAGCTCCCATTCACAGCCCAAGGTGTCCAGCATGGCCCTGCTG------------------------------------------------------CCCTCTGCCCTGGTC i colAng1.NW_012116910v1 I 305 C 0 s calJac3.chr5 117217115 192 - 159171411 -TTTTAATATAATCTTATCTCACAGCTGTAGAAATGATCTTATTTCTCTGTGCCTGTGCAGAAGTCTTAGGAACATCCAAACTATGAATTCACTTTGTTGGCATTCCCGGAATACATATTATCCCCAAatgttactgccctccttaaaagcttctaacatgtccccctcaccggagcataaatgccagctccc-------------------------------------------------------------------------------------------------------- i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 25670 4490 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e panPan2.chr3 204924092 10571 + 205426864 M a score=77695.000000 s hg38.chr3_KI270934v1_alt 149385 27 + 163458 TAtggtctcccctcttaaatgccagca s panTro5.chr3 2614773 27 - 202621043 TATGGTCTCCCCTCTTAAATGCCAGCA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 43001 27 + 880730 tatggtctcccctcttaaatgccagca i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2913445 27 - 123690457 TATGGTCTCCCCTCTGAAATGCCAGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179801185 27 - 180051392 TGTGGATTCCCCTCTTACGTGCCAGCA i rheMac8.chr6 C 0 I 130 s cerAty1.NW_012009470v1 546978 27 - 16742782 TGTGGACTCCCCTCTTACATGCCAGCA i cerAty1.NW_012009470v1 C 0 I 1 s chlSab2.chr4 1463252 27 + 91010382 TATGGTCTCCCCTCTtaaatgccagca i chlSab2.chr4 I 2373 I 1 s manLeu1.NW_012109696v1 61507 27 - 6207128 TGTGGACTCCCCTCTTACATGCCAGCA i manLeu1.NW_012109696v1 C 0 I 1 s colAng1.NW_012116910v1 846768 27 - 1687011 TGTGGACTCCCCCCTTAAATGCCAGCA i colAng1.NW_012116910v1 C 0 I 1 e macNem1.NW_012013899v1 25670 4490 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117217307 0 - 159171411 C e panPan2.chr3 204924092 10571 + 205426864 M a score=162877.000000 s hg38.chr3_KI270934v1_alt 149412 46 + 163458 ccatccacagcccacagtgcccagcacggccctgccctctgccctg s panTro5.chr3 2614800 46 - 202621043 CCATCCACAGCCCACAGtgcccagcacggccctgccctctgccctg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 43028 44 + 880730 ccatccacagcccacagtgcccagcacggccctgccctctgctc-- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2913472 44 - 123690457 CCATCCACAgcccacagtgcccagcacagccctgccctctgctc-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179801342 46 - 180051392 ccatccacagcccacagtgcccagcacggccctgccctctgctctg i rheMac8.chr6 I 130 C 0 s cerAty1.NW_012009470v1 547006 46 - 16742782 CTAGCCACAGCCCACAGTGCCCGGCACGGCCCTGCCCTCTACCCTG i cerAty1.NW_012009470v1 I 1 I 127 s chlSab2.chr4 1463280 46 + 91010382 ccatccagagcccacagtgcccggcacggccctgccgtctactctg i chlSab2.chr4 I 1 C 0 s manLeu1.NW_012109696v1 61535 46 - 6207128 CCATCCACAGCCCACAGTGCCCGACACGGCCCTGCCCTCTACCCTG i manLeu1.NW_012109696v1 I 1 I 2005 s colAng1.NW_012116910v1 846796 46 - 1687011 CCATCTATATTCTACAGTGCCCAGCACGGCCCTGCCCTCTACCCTG i colAng1.NW_012116910v1 I 1 N 0 s calJac3.chr5 117217307 44 - 159171411 --atccacagcccacagtgcccagcatggccctgccctctgccctg i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 25670 4490 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e panPan2.chr3 204924092 10571 + 205426864 M a score=2469.000000 s hg38.chr3_KI270934v1_alt 149458 10 + 163458 ccctctgctg s panTro5.chr3 2614846 10 - 202621043 ccctctgcTG i panTro5.chr3 C 0 C 0 s colAng1.NW_012118799v1 466014 10 - 514179 ccctctgctc i colAng1.NW_012118799v1 N 0 C 0 e macNem1.NW_012013899v1 25670 4490 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117217351 0 - 159171411 C e manLeu1.NW_012109696v1 61581 2005 - 6207128 I e chlSab2.chr4 1463326 0 + 91010382 C e cerAty1.NW_012009470v1 547052 127 - 16742782 I e rheMac8.chr6 179801388 0 - 180051392 C e nomLeu3.chr11 2913516 0 - 123690457 C e gorGor5.CYUI01015759v1 43072 0 + 880730 C e panPan2.chr3 204924092 10571 + 205426864 M a score=1341159.000000 s hg38.chr3_KI270934v1_alt 149468 534 + 163458 tggcctaaggtctctccccggtgccgttcccttcctgacggacaggcctctgtccgttcctcaaaccacacaggctcaggcctcactccaggcctttg-cgcttctgtgccctctgcctagggtgcctttcccGGGCTCTGcatcctcctctcaacccactgagctccagcctgctggtcgcccctcaggtggatgaatacacggtgtcctctcaccccaccagcttttgcacaggctcttctctgtgccagacaaacacc--------ctatcggggtttac-tctctaaataccattcatccttggagtctccactgaaatatcgctccctGCCCACCCCCCTCACTTGGACTTAAC-CTTGGTTAGGTTGC-CAACCCCCGTCTCCTGACTCCGGGAAGCTAGATGCTCTCCTA-GCACTCGGAACTTGCCCATTG--------CCACA-TTTGCACAC-CCGTGGTTACTGGGttaggtt-ggcgcaca-agtcat-cgcgggtttt-gccattact-attaatgAACGGCAGCAACGGCTCCtccccgtttcttttg s panTro5.chr3 2614856 533 - 202621043 TGGCCTAAGGTctctcccctgtgccgttcccttcctgacggacaggcctctgtccgttcctcaaaccacac-ggctcaggcctcactccaggcctttg-cccttctgtgccctctgcctagggtgcctttcccgggctctGcatcctcctctcaacccgctgagctccagcctgctggtcgcccctcaggtggatgaacacacggtgtcctctcaccccaccagcttttgcacaggctcttctctgtgccagacaaacacc--------ctatcggggtttac-tctctaaataccattcatccttggagtctccactgaaatatcgctccctgcccaaccccctccctTGGACTTAAC-CTTGGTTAGGTTGC-CAACCCCCGTCTCCTGACTCCGGGAAGCTAGATGCTCTCCTA-GCACTCGGAACTTGCCCATCG--------CCACA-TTTGCACAC-CCCTGGTTACTGGGttaggtt-ggcgcaca-agtcat-cgcgggtttt-gccattact-attcatgaactgcaGCAACGGCTCCtccccgtttctttct i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 43072 536 + 880730 tggcctaaggtctctcccctgtgccgttcccttcctgatggacaggcctctgtccgttcctcaaaccacacaggctcaggcctgactccaggcctttg-cccttctgtgccctctgcctagggtgcctttcccaggcactgcatcctcctctcaacccgctgagctccagcctgctggtcgcccctcaggtggatgaacacacggtgtcctctcgccccaccagcttttgcagaggctcttctctgtgccagacacacaccctct----ctatcggggtttac-tctctaaataccattcatccttgcagtctccactgaaatatcgctccctgcccacccccctcccttggacttaac-cttggttaggttgc-caacccccgtctcctgactcc-GGAAGCTAGATGCTCTCCTA-GCACCCGGAACTTGCCCATCG--------CCACA-TTTGCAAAC-CCGTGGTTACT-GGttaggtt-ggtgcaca-agtcat-cgcgggtttt-gccattact-attaatgAACTGCAGCACCGGCTCctccccgtttcttttg i gorGor5.CYUI01015759v1 C 0 I 1 s nomLeu3.chr11 2913516 538 - 123690457 tggcctcaggtctctcccctgtgccgttcccttcctgccagacaggcctctgtccgttcctcaaaccacacaggctcgggcccgactccaggcctttg-ccctgctgtgccctctgcctagggtgcctttcccgggctctgcatcctcctctcaacccgctgagctccagcctgctggtcgcccctcaggtggaggaacacacggtgtcctctcgccccgccggcttttgcacaggctcttctctgtgccagacacacaccctct----ctatcggggtttca-tctctaaataccattcatccttggagtctccactgaaatatcgctccctGCCCACCCTCCTCACTTGGACTTAAC-CTTGGTTAGGTTGC-CAACCCCCGTGTCCTGACGCCGGGAAGCTAGATGCTCTCCTA-GCACTCGGAACTTCCCAATTG--------CCACATTTTGCACAC-CCGTGGTTACTGTGttaggtt-ggggcaca-agtcat-cgcggttttt-gccattact-attaatgaactgcaGCAGCGGCTCCTCCCCATTTCTTCT- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179801388 536 - 180051392 --gcttaaggtctctcccctctgccattcccttcctgccagacaggcctctgtcagttccccaaaccacaga--ctcaggcctgactccgaacctttc-ccctgctgtgccctctgcctggggtgcctttccccggctccacatcctcctcttaactcactcagctccagcctgctggtcgcccctcaggtggatgaacacatggtgtcctcccgccccaccggccttggcataggctcttctctgtgccagacacactccccctctcactatcagggtttac-tctctaaatagcattcatccttggagtctccactgaaatatcgctccctgCCCA-CCCCCTCACTGGGACTTAAC-CTTGGTTAGGTTGC-CAAC--CCATCTCCAGACTCCAGGAAGCCAGATGCCATCCTA-GCACTTGGAACTTCCCCATTG--------CCACATTTTGCACAC-CCGTGATTACTGTGttaggtt-ggtgcaga-agtcat-cgagattttt-gccattact-attaacgaactgcaGCACCAGctccttcccactttttttt i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 547179 548 - 16742782 tggcctaaggtctcttccctctgccattcccttcctcccggacaggcctctgccagttccccaaaccacagaggctcaggcctgactctggacctttc-ccctgctgtgccctctgcctggggtgcctttcctgggctccacatcctcctcttaactcactcagctccagcctgctggtcgcccctcaggtggatgaacacatggtgtcctcccgcccca-cggcctggac--aggctcttctctgtgccagaaacactccccctctcactatcggggtttac-tctctaaataccattcatccttggagtctccactgaaatattcgctcctGTCCA-CCCCCTCACTGGGACTTATTACCTGGTTAGGTTGCTCAAC-GCCGTCTCC-GACT-CAGGAAGCCAG-TGCCATCCTACGCACCTTGAA---CCCCATTGTTTTTTTCCCACATTTTGCACACGCCGTGATTACTGTGTTAGGTTGGGTGCAGAGGGTCATACGCGGTTTTTCGCCATTACTAATTAACG-ACTGCAGCACCAGCTCCTTCCCCTTTTTTTTT i cerAty1.NW_012009470v1 I 127 C 0 s chlSab2.chr4 1463326 534 + 91010382 --gcctaaggtctctcccctctgccattcccttcctcctggacaggcctctgccagttccccaaaccacagaggctcaggcctgactccggacctttc-ccctgctgtgccctctgcctggggtgcctttccccagctccacatcctcctcttaactcactcagctccagcctgctggttgcccctcaggtggatgaacacatggtgtcctcccgccccaccggccttggcataggctcttctccgtgccagacacactccccctctcactatcggggtttac-tctctaaataccattcatccttggagtctccactgaaatatcgctccctgCCCA-CCCCCGCACTGGGACTTAAC-CTTGGTTAGGTTGC-CAAC--CCATCTCCTGACACCAGGAAGCCAGATGCCATCCTA-GCACTTGGAACTCCCCCATTG--------CCACATTTTGCACAC-CCGTGATTACTGTGttaggtt-ggtgcaga-agtcat-cacggttttt-gccattact-attaacgAACTGCAGCACCAGctccttcccactttt---- i chlSab2.chr4 C 0 C 0 s colAng1.NW_012118799v1 466024 535 - 514179 tggcctaaggtctctcccctctgccattcccttcctgccagacaggcctctgtcagttcccgaaaccacagaggctcaggcctgactccggacctttc-ccctgctgtgccctctgcctggggtgcctttcccgggctccacatcctcctcttaactcactcagctccagcctgctggtcgcccctcaggtggatgaacacacggtgtcctcccgccccaccagccttcacacaggctcttctctgtgccagacacactccccctctcactatcggggtttac-tccctaaataccattcatccttggagtctccactgaagtatcgctccctGCCCA-CCCCCTCACTGGGACTTAAC-CTTTGTTAGGTTGA-CAAC--CCATCTCCTGACTCCAGGAAGCCAGATGCCATCCTA-GCACTTGGAACTCCCCCATTG--------CCACATTTTTCACAC-CTGTGATTACTGTGttaggtt-ggtgcaga-agtcat-cgtggttttt-gccattact-attaacgaactgcaGCACCAGctccttcccacttt----- i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr5 117217351 532 - 159171411 --gcctaatgg-tctcccctctgctgttactttcctgtcggacaggcctctgtcggttcctcaaaccacacaggttcaggcctgactccaggcttttgtccctgctatg-cctctgcctgggttgcctttccccggctcc-cgtcctcctctcaacgtgctcagctccagcctgctggttgccccgaaggttgatagatacacaatgtcctcc--tcccataggcctttgcacacactcttctctttgcctgaaatgcttccccctttcacatctgggtttacttttctaattaccagtcatccttggagtctccactgaaatatcgctccctGCCCGCCCCCATCACTTGGACTTAAC-CTTGGCTAGGTTGC-CAAACCCTGTCTCCTGACTCCAGGAAGCTAGATGCCATCCCA-GCACTTGGAACTTGCCCATTG--------CAACGTTTTGCACGC-TCGTAATTATTCTAttaggtt-ggtgcgga-agttac-cgcagttttt-gctgttact-tttaatgAACTGCAGCACCAGCTCCTACCCGCTT------ i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 25670 4490 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e manLeu1.NW_012109696v1 61581 2005 - 6207128 I e panPan2.chr3 204924092 10571 + 205426864 M a score=381450.000000 s hg38.chr3_KI270934v1_alt 150002 118 + 163458 ttttttttttcgccattacttttaatg---------------act--gctgcaccaacctattagaatcatttatatt----tatccatccatcatctgccttcccctctagaaaggaagctccatgagaatagaggcc s panTro5.chr3 2615389 118 - 202621043 tttttttttttgccattacttttaatg---------------act--gctgcaccaacctattagaatcatttatatt----tatccatccatcatctgccttcccctctagaaaggaagctccatgagaatagaggcC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 43609 118 + 880730 ttttttttttttccattacttttaatg---------------act--gctgcaccaacctgttagaatcattaatatt----tatccatccatcatctgccttcccctctagaaaggaagctccatgagaatagaggcC i gorGor5.CYUI01015759v1 I 1 C 0 s nomLeu3.chr11 2914054 118 - 123690457 TTTCTTTTTTTGCCATTCCTTTTAATG---------------ACT--GCTGCACCAACCTATTAGCATCATTTATATT----TACCCATCCATCATCTGCCTGCCCCTCTAGAAAGGAAGCCCCATGAGAATAGAGGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179801924 114 - 180051392 -----ttttt--ccattacttttaatg---------------act--gctgccccaa-ctattagcatcatttatatttatctatctatccatcatctgccttcccctctagaaaggaagctccatgagaatagaggcc i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 547727 114 - 16742782 -----TTTTTTGCCATTACTTTTAATG---------------ACTTGGCTGCCCCAA-CTATTAGAATCATT--TATTATTTTTTCTATCCATTATCTGCCTTCCCCTCTAGAAAGGAAG-TCCAGGA-AATAGAGGCC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1463860 117 + 91010382 -ttttttttttgccattacttttaatg---------------act--gctgccccaacctattagaatcatttatatt----tattcatccatcatctgccttcccctctagaaaggaagctccatgagaacagaggcc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 63586 121 - 6207128 Tttttttttttgccattacttttaatg---------------act--gctgccccaa-ctattagaatcatttatatttatctatctatccattatctgccttcccctctagaaaggaagctccaggagaatagaggcc i manLeu1.NW_012109696v1 I 2005 C 0 s colAng1.NW_012118799v1 466559 122 - 514179 tttttttttttgccattacttttaatg---------------act--gctgccccaacctattagaatcatttatatttatctatctatccatcatctgccttcccctctagaaaggaagctccatgagaatagaggcC i colAng1.NW_012118799v1 C 0 M 2934 s calJac3.chr5 117217883 128 - 159171411 -----Tttattgccattacttttaacggcaaaaaccagaattact--gctgcaccaacctaaTAGAATCAtttatatt----tattcatccatcatctgtcttcccctctagaaagcaagctccacgagtatagggacc i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 25670 4490 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e panPan2.chr3 204924092 10571 + 205426864 M a score=68749.000000 s hg38.chr3_KI270934v1_alt 150120 25 + 163458 aaatctactcaaatcactccacctt s panTro5.chr3 2615507 25 - 202621043 AAATCTACTCAAATCACTCCACCTT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 43727 25 + 880730 AAATCTACTCAAATCACTCCACCTT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2914172 25 - 123690457 AAATCTACTCAAATCAGTCCACCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179802038 25 - 180051392 aaatctactcaaatcactctagctt i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 547841 24 - 16742782 AAAT-TACTCAAATCACTCTGCCTT i cerAty1.NW_012009470v1 C 0 I 43 s chlSab2.chr4 1463977 25 + 91010382 aaatctactcaaatcactccagctt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 63707 25 - 6207128 aaatctactcaaatcactctagctt i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 117218011 25 - 159171411 aaatcGACTCAAATCGCTCCACCTT i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 25670 4490 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012118799v1 466681 2934 - 514179 M e panPan2.chr3 204924092 10571 + 205426864 M a score=98200.000000 s hg38.chr3_KI270934v1_alt 150145 43 + 163458 cccagcacATTGTTTGTCAATAATCATTTACCAACTGACTGAT s panTro5.chr3 2615532 43 - 202621043 CCCAGCACATTGTTTGTCAATAATCATTTACCAACTGACTGAT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 43752 43 + 880730 CCCAGCACATTGTTTGTCAATAATCATTTACCAACTGACTGAT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2914197 43 - 123690457 CCCAGCACATTGTTTGTCAATAATCATTTACCAACTGACTGAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179802063 43 - 180051392 cccagcacactgcttgtcaataatcatttaccgattgactgaC i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 1464002 43 + 91010382 cccagcacactgcttgtcaataatcatttactgactgactgaT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 63732 43 - 6207128 cccagcacattgcttgtcaataatcatttatcgactgactgaC i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 117218036 43 - 159171411 CCTAGCACATTATTTGTGGGTAATTATTTACCGACTGACTGAT i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 25670 4490 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012118799v1 466681 2934 - 514179 M e cerAty1.NW_012009470v1 547865 43 - 16742782 I e panPan2.chr3 204924092 10571 + 205426864 M a score=361063.000000 s hg38.chr3_KI270934v1_alt 150188 134 + 163458 AGAGAAATGCCTTCCCTGTTGCTGGGATGAGGC-----ACATGACA-CGCCCCTTTG-AAAGTCAATTCCAT-----GGACAGTTAGCATTTGCTCTTCACTCCTG-CACCCGTGGCGTGGCTGGGCTTAGGCTGATCTAGTCTGGC s panTro5.chr3 2615575 134 - 202621043 AGAGAAATGCCTTCCCTGTTGCTGGGATGAGGC-----ACATGACA-CGCCCCTTTG-AAAGTCAATTCCAT-----GGACAGTTAGCATTTGCTCTTCACTCCTG-CACCCATGGCGTGGCTGGGCTTAGGCTGATCTAGTCTGGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 43795 134 + 880730 AGAGAAATGCCTTCCCTGTTGCTGGGATGAGGC-----ACATGACA-CGCCCCTTTG-AAAGTCAATTCCAT-----GGACAGTTAGCATTTGCTCTTCACTCCTG-CACCTGTGGCGTGGCTGGGCTTAGGCTGATCTATTCTGGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2914240 134 - 123690457 AGGGAAATGCCTTCACTGTTGCTGGGATGAGGC-----ACATGACA-CGCCCCTTTG-AAAGTCAATTCCAT-----GGACAGTTAGCATTTGCTCTTCACTCCTG-CACCCGTGGCGTGGCTGGGCTTAGGCTCATCTAGTCTGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179802106 139 - 180051392 AGAGAAATGCCGTCACTGTTGCTGGGATGAGGC-----ACACGACA-CGCCCCTTTG-AAAGCCACTGTCATGGACAGGACAGTTAGCATTTGCTCTTCACTCCTG-CACCCGTGGCGTGGCTGGGCTTAGGCTGATCTAGTCTGGG i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 547908 131 - 16742782 AGAGAAATGCCGTCACTGTTGCTGGGAT--GGC-----AC-CGACACCGCCCCTTTGAAAAGCCACTGTCAT-----GGACAGTTAGCGTTTGCTCTCAACTCCTGCCACCCGTGGCGTGGCT--GCTTA-GCTCATCTAGTCTGGG i cerAty1.NW_012009470v1 I 43 I 2 s chlSab2.chr4 1464045 134 + 91010382 AGAGAAATGCCGTCACCGTTGCTGGGATAAGGC-----ACCTGACA-TGCCCCTTTG-AAAGCCACTGTCAT-----GGACAGTTAGCATTTGCTCTTCACTCCTG-CACCCGTGGTGTGGCTGGGCTTAGGCTGATCTAGTCTGGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 63775 134 - 6207128 AGAGAAATGCCGTCACTGTTGCTGGGATGAGGC-----ACACGACA-CGCCCCTCTG-AAAGCCACTGTCAT-----GGACAGTTAGCATTTGCTCTTCACTCCTG-CACCCGTGGCGTGGCTGGGCTTAGGCTGATCTAGTCTGGG i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 117218079 139 - 159171411 AGAGAAACACCTTCATTGTTGCTGGGAGGAAGCCCGTGACAGGACA-CTCCCCTTTG-AAAGTCAGTGTCAT-----GGGCCGTTAGCATTTGCTTTTCACTCCTG-CACCCGGGGCTTGGCTGGGCTGAGGCTGATCTAGTCTGGA i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 25670 4490 + 100774 M e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012118799v1 466681 2934 - 514179 M e panPan2.chr3 204924092 10571 + 205426864 M a score=46584.000000 s hg38.chr3_KI270934v1_alt 150322 13 + 163458 CTTGACTCCAGGC s panTro5.chr3 2615709 13 - 202621043 CTTGACTCCAGGC i panTro5.chr3 C 0 I 9323 s gorGor5.CYUI01015759v1 43929 13 + 880730 CTTGACTCCAGGC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2914374 13 - 123690457 CTTGACTGCAGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179802245 13 - 180051392 CTTGACTCCAGGC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 30161 13 + 100774 CTTGACTCCAGGC i macNem1.NW_012013899v1 M 4490 C 0 s cerAty1.NW_012009470v1 548041 11 - 16742782 CTTGACTCAAG-- i cerAty1.NW_012009470v1 I 2 C 0 s chlSab2.chr4 1464179 13 + 91010382 CTTGACTCCAGGC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 63909 13 - 6207128 CTTGACTCCAGGC i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 117218218 13 - 159171411 CTTGACTCCAGGC i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012118799v1 466681 2934 - 514179 M e panPan2.chr3 204924092 10571 + 205426864 M a score=826625.000000 s hg38.chr3_KI270934v1_alt 150335 249 + 163458 TAAGGATGGGAACCATGACTGCTCCACACGCCTCTCATCCCACAGCCAGAGCCG---CCGTTCCCTGGGGCAC-GTGCATC---------------------------------------------TCATGGGGAAAATCAAGAGCCTTagacggcaggcctggcagtgcccacacattccaggcttctgcttgtgccgt-gtctg-tgaaaatctc-gttggcagaag-caagtcacccagccaCGAGCAACACCTATGGGA--CGGATAAGTCCATCCACCCTCCCTCGGGCCCTGGCAAGG s panTro5.chr3 2625045 249 - 202621043 TAAGGATGGGAACCATGCCTGCTCCACACGCCTCTCATCCCACAGCCAGAGCCG---CCGTTCCCTGGGGCAC-GTGCATC---------------------------------------------TCATGGGGAAAATCAAGAGCCTTAGAGGGCAGGCCTGGCAGTGCCCACACATTCCAGGCTTCTGCTTGTGCCGT-GTCTG-TGAAAATCTC-GTTGGCAGAAG-CAAGTCACCCAGCCACGAGCAACACCTATGGGA--TGGATAAGTCCATCCACCCTCCCTCGGGCCCTGGCAAGG i panTro5.chr3 I 9323 C 0 s gorGor5.CYUI01015759v1 43942 249 + 880730 TGAAGATGGGAACCATGCCTGCTCCACACACCTCTCATCCCACAGCCAGAGCTG---CCGTTCCCTGGGGCAC-GCACATC---------------------------------------------TCATGGGAAAAATCAAGAGCCTTAGAGGGCAGGCCTGGCAGTGCCCACACATTCCAGGCTTCTGCTTGTGCCGT-GTCTG-TGAAAATCTC-GTTGGCAGAAG-CAAGTCACCCAGCCACGAGCAACACCTATGGGA--TGGATAAGTCCATCCACCCTCCCTCGGGTCCTGGCAAGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2914387 249 - 123690457 TAAGGATGGGAACCATGCCTGCTCCACACGCCTCTCATCCCGCAGCCAGAGCCG---CCGTTCCCTGGGGCAC-GCGCATC---------------------------------------------TCGTGGGGAAAATCAAGAGCCTCagagggcaggcctggcagtgcccacacattccaggcttctgcttgtgccgt-gtctg-tgaaaatctc-actggcagaag-caagtcacccagccaCGAGCAACACCTATGGGA--TGGATAAGTCCATCCACCCTCCCTCGGGCCCTGGCAAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179802258 295 - 180051392 TGAGCGTGGGAACCATGTGTGCTCCACACGCCTCTCATCCTGCAGCCAGAGCCG---CTGTTCCCCGGGGCAC-ACGCATCTCGTGGGGAAAATCAAGAGCCTTAGAGGGCAGGCCTGGCAGCACCTCGTGGGGAAAATCAAGAGCCTTAGAGGGCAGGCCTGGCAGTGCCCGCACATTCCAGGCTTCTGCCCGTGCCGT-GTCCG-TGCAAATCTC-GTTGGCAGAAGTTAAGTCACCCAGCCACAAGCAACACCTGTGGGA--TGGAGAAGTCTGTCCACCCTCCCTCGGGCCCTGGCTAGG i rheMac8.chr6 C 0 I 6 s macNem1.NW_012013899v1 30174 295 + 100774 TGAGCATGGGAACCATGTGTGCTCCACACGCCTCTCATCCTGCAGCCAGAGCCG---CTGTTCCCCGGGGCAC-GCGCATCTCGTGGGGAAAATCAAGAGCCTTAGAGGGCAGGCCTGGCAGCACCTCGTGGGGAAAATCAAGAGCCTTAGAGGGCAGGCCTGGCAGTGCCCGCACATTCCAGGCTTCTGCTTGTGCCGT-GTCCG-TGCAAATTTC-GTTGGCAGAAGTTAAGTCACCCAGCCACGAGCAACACCTGTGGGA--TGGATAAGTCCATCCACCCTCCCTCGGGCCCTGGCTAGG i macNem1.NW_012013899v1 C 0 I 6 s cerAty1.NW_012009470v1 548052 252 - 16742782 CGAGCGTGGGAACCATGTGTGCTCCACACGCCTCTCATCCTGCAGCCAGAGCCGCACCTGTTTCCGGAGGCACGGCGCATC----------------------------------------------CGTGGGGAAAATCAAGAGCGCTAGA-GGCAGGCCTGGCAGTG-CCGCACATTCCAGG-TTCTGCTTGTGCCGTGGTCCGTTGCAAATCTCTGTTGGCAGAAG-CAAGTCACCCAGCCACGG--CACACCTGTGGGGATGGGATAAGTCCGTCCACCCTCCCTCGGGCCCTGGCTAGG i cerAty1.NW_012009470v1 C 0 I 14 s chlSab2.chr4 1464192 249 + 91010382 TGAGCGTGGGAACCATGTGTGCTCCACACGCCTCTCATCCTGCAGCCAGAGCCG---CTGTTCCCTGGGGCAC-GCGCATC---------------------------------------------TCATGGGGAAAATCAAGAGCCTTagagggcaggcctggcagtgcccgcacattcaaggcttctgcttgtgccgt-gtctg-tgcaaatctc-gttggcagaag-caagtcacccagccaCAAGCAACACCTGTGGGA--TGGATAAGTCCGTTCACCCTCCCTCGGGCCCTGGCTAGG i chlSab2.chr4 C 0 I 6 s manLeu1.NW_012109696v1 63922 249 - 6207128 TGAGCGTGGGAACCATGTGTGCTCCACACGCCTCTCATTCTGCAGCCAGAGATG---CTGTTCCCCGGGGCAG-GCGCATC---------------------------------------------TCGTGGGGAAAATCAAGAGCTTTAGAGGGCAGGCCTGGCAGTGCCCGCACATTCCAGGCTTCTGCTTGTGCCGT-GTCTG-TGCAAATCTC-GTTGGCAGAAG-CAAGTCACCCCGCCACAAGCAACACCTGTGGGA--TGGATAAGTCCGTCCACCCTCCCTCGGGCCCTGGCTAGG i manLeu1.NW_012109696v1 C 0 I 6 s calJac3.chr5 117218231 229 - 159171411 TGAGGGT-GGAACCATGCGTGCTCCACATGCCTCTCAACCTGCAGTTGGAGCCG---ACGTTCCCTGGGGCAC-ACTCATC---------------------------------------------TCATGGGAAAAATCAAGAGCATTAGAGGGCAGGCCTGGCAGTGCCAACACATTTCAGGCTTCTGCTTGTGCAGT-GTCTA---------TT-------------AAAATCACCCAGGCACAAGCAGCACCTATGGGA--TGGATAAGTCTCTCCAGCCTCCCTCAGGCCCTGGCAAGG i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012118799v1 466681 2934 - 514179 M e panPan2.chr3 204924092 10571 + 205426864 M a score=11285.000000 s hg38.chr3_KI270934v1_alt 150584 5 + 163458 TTGTG s panTro5.chr3 2625294 5 - 202621043 TTGTG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 44191 5 + 880730 TTGTG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2914636 5 - 123690457 TTGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179802559 5 - 180051392 CTGCG i rheMac8.chr6 I 6 I 1 s macNem1.NW_012013899v1 30475 5 + 100774 CTGCG i macNem1.NW_012013899v1 I 6 I 1 s chlSab2.chr4 1464447 5 + 91010382 CTGTG i chlSab2.chr4 I 6 I 1 s manLeu1.NW_012109696v1 64177 5 - 6207128 CTGCG i manLeu1.NW_012109696v1 I 6 I 1 s calJac3.chr5 117218460 5 - 159171411 ATGTG i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012118799v1 466681 2934 - 514179 M e cerAty1.NW_012009470v1 548304 14 - 16742782 I e panPan2.chr3 204924092 10571 + 205426864 M a score=950083.000000 s hg38.chr3_KI270934v1_alt 150589 311 + 163458 GCTATGTCAT-ACTCTTACGGGGGGAGTGAAAAATTGAGGCCCAACATT--AAATCACCCAC-G-CGAGAAATGT-CAGCCTCTG---TCCCCACGCTGGAATCATTTTTCACCAGCGGGTTTGC--------CTGAATTCCCTTTGCAATGG-TGTCTGCAGGTTTAGCCCAAT-GCTGGTCCCCGTGGAGGACAC-AGAAGCCTCAATGGGCCT-CCGTCTGTTGGGAAGAAC-AAGATATTAG-CTTGGCGCAAAA-----CCACC-GCAAGCCCCAGGAGGCCCTTGTGCCA-TGAGACAGGAGAGGGGCAG---AGAACTGTGGGAACTCAGGA---AAGCT s panTro5.chr3 2625299 311 - 202621043 GCTATGTCAT-ACTCTTATGGGGGGAGTGAAAAATTGAGGCCCAACATT--AAATCACCCAC-G-CAAGAAATGT-CAGCCTCTG---TCCTCGCGCTGGAATCATTCTTCACCAGCGGGTTTGC--------CTGAATTCCCTTTGCAATGG-TGTCTGCAGGTTTAGCCCAAT-GCTGGTCCCCGTGGAGGACAG-AGAAGCCTCAATGGGCCT-CCGTCTGTTGGGAAGAAC-AAGATATTAG-CTTGGCGCAAAA-----CCACC-GCAAGCCCCAGGGGGCCCTTGTGCCA-TGAGACAGGAGAGGGGCAG---AGAACTGTGGGAACTCAAGA---AAGCT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 44196 313 + 880730 GCTATGTCAT-ACTCTTACGGGGGGAGTGAAAAATTGAGGCCCAACATT--AAATCACCCAC-G-CAAGAAATGT-CAACCTCTG---TCC-CAAGCTGGAATCATTCTTCATCAGTGGGTTGCC--T--GAGCTGACTTCCCTTTGCAATGG-TGTCTGCAGGTTTAGGCCAAT-GCTGTTCCCCATGGAGGACAG-AGAAGCCTCAATGGGCCT-CCGTCTGTTGGGAAGAAC--AGATACTAG-CTTGGTGCAAAA-----CCACC-GCAAGCCCCAGGGGGCCCTCGCGCCA-TGAAACAGGAGAGGGGCAG---AGAACTGTGGGAGCTCAGGA---AAGCT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 2914641 312 - 123690457 GCTATGTCAT-ACTCTTACGGGGGGAGTGAAAAATTGAGGCCCAACATT--AAATCACCCATGG-CAAGAAATGT-CAGCCTCCG---TCAGCACACTGGAATCATTCTTCATCAGCGGGTTTGC--------CTGACTTCTCTTTGCAATGC-TGTCTGCAGGTTTAGGCCAAT-GCTATTCCTCATGGAGGACAG-AGAAGCCTCAATGGGCCT-CCGTCTGTTGGGAAGAAC-AAGATATTAG-CTTGGTGTAAAA-----CCACC-GCAAGCCCCAGGTGGCCCTTGCCCTG-TGAGACAGGAGAGGGGCAG---AGAACTGTGGGAACTCAGGA---AAGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179802565 318 - 180051392 GCTGTGTCAT-ACTCTTAC-AGGAGAGTGAAAAATTGAGGCCCAACATT--AAATCACCCATGG-CAAGAAATGT-CGGCCTCTG-TGTCCCCACGCTGGAATCATTCTTCACCAGCGGGTTCGC-CT--GAGCTGACTTCCCTTTGCAATGG-TGTCTGCAGGTTTAGGCCAAT-GCTGTTCCCTGTGGAGGAGAG-AGAAGCCTCAGTGGGCCT-CTGTCTGTTGGGAAGAAC-AAGATATTAG-CTTGGCGCAAAA-----CCACC-ACAAGCCCCAGGGGGCCCACGCCTTG-TGTGACAGGAGAGGGGAAG---AGAACTGTGGGAACTCAGGC---AAGCT i rheMac8.chr6 I 1 C 0 s macNem1.NW_012013899v1 30481 321 + 100774 GCTGTGTCAT-ACTC-TAC-AGGAGAGTGAAAATTGGAGGCCCAAAAAT--TAATCACCCATGGCCAAGAAATGTCCGGCCTCTG-GTCGCCCACGCTTGAATCATTCTTCACCAGC-GGTTCGCACT--GAGCTGACTTCCTCTTGCAATGG-TGTCTGCAGGTTTAGGCCAATGGCTGTTCCCTGTGGAGGAGAG-AGAAGCCTCAGTGGGCCTGCTGTCTGTTGGGAAAAAC-AAGATATTAGCCTTGGCGCAAAA-----CCACCGACAAGCCCCA-GGGGCCCACGCTTGC-TGTGACAGGAGAGGGGCAG---AGAACTGT-GGAACTCAGGA---AAGCT i macNem1.NW_012013899v1 I 1 I 1360 s cerAty1.NW_012009470v1 548318 331 - 16742782 GCTGTGTCATAACTCTTAC-AGGGGAGTGAAAAATTGAG--CCAACCATTATAATCACCCACAG-CAAGAAATGT-CGGCCTCTGTGTTCCCCACGCTGG-ATCATTCTTCACCAGCGGGTTCGC-CTTGAAGCTGACTTCCTTGTGCAATGG-TGTCTGCAGGTTTAGGCCAAT-GCTGTT-CCTGTGGAGGAGAGAAGAAGCCTCAGT-GGCCT-CTGTCTGTTGGGAAGAACAAAGATATTAGGCTTGGCCAAAAAACCCCCCATC-ACAAGCCCCAGGGGGCCACTGCCTTGTTGTGACAGGAGAGGGGCAG---AGAACTGTGGGAACTCAGGAAGGAAGCT i cerAty1.NW_012009470v1 I 14 C 0 s chlSab2.chr4 1464453 316 + 91010382 GCTGTGTCAT-ACTCTTAC-AGGAGAGTGAAAAATTGAGGGCCAACATT--AAATCACCCATGG-CAAGAAATGT-CGGCCTCTG-TGTCCCCACATTGGAATCATTCTTCACCAGCGGGTTCGC-CT--GAGCTGACTTCCCTTTGCAATGG-TGTCTGCAGGTTTAGGCCAAT-GCTGTTCCCTGTGGAGGAGAG-AGAAGCCTCAGTGGGCCT-CTGTCTGTTGGGAAGAAC-AAGATATTAG-CTTGGCGCAAAA-----CCACC-ACAAGCCCCAGGGGG--CACGCCTTG-TGTGACAGGAGAGGGGCAG---AGAACTGTGGGAACTCAGGC---AAGCT i chlSab2.chr4 I 1 C 0 s manLeu1.NW_012109696v1 64183 318 - 6207128 GCTGTGTCAT-ACTCTTAC-AGGAGAGTGAAAAATTGAGGGCCAACATT--AAATCACCTATGG-CAAGAAATGT-CGGCCTCTG-TGTCCCCACATTGGAATCATTCTTCACCAGCGGGTTCGC-CT--GAGCTGACTTCCCTTTGCAATGG-TGTCTGCAGGTTTAGGCCAAT-CCTGTTACCCATGGAGGAGAG-AGAAGCCTCAGTGGGCCT-CTGTCTGTTGGGAAAAAC-AAGATATCAG-CTTGGCACAAAA-----CCACC-ACAAGCCCCAGGGGGCCCACGCCTTG-TGTGACAGGAGAGGGGCAG---AGAACTGTGGGAACTCAGGA---AAGCT i manLeu1.NW_012109696v1 I 1 C 0 s calJac3.chr5 117218465 323 - 159171411 GATGTGTCAT-ACTCTTACAAGAGGAGTGAAATATTGAGGCCCATCATT--AAATCACCTACAG-CAAGAAATGT-CAGCCTCTG-TGTCCCCACTCTGGGATCATTCTTCATCAGCAGGTTTAC-TG--GAGCTGACTGCCCTTTGCAATGGTTGTCCGCAGGATTAGGCCAGT-GCTGTTCCCCGTGGAGGACAA-AGAAGCCTCAGTTGGCCT-CCAACTGTTGGGAAGAAA-AGGATATTAG-ATTGGCGTAAAA-----CAACC-ACAAGCCCCAGGGGACCTGTGCCCCA-TGAGACAGGAGAGGGGCAGAGAAGAACCATGGGAGCTCAGGG---ACGCT i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012118799v1 466681 2934 - 514179 M e panPan2.chr3 204924092 10571 + 205426864 M a score=22994.000000 s hg38.chr3_KI270934v1_alt 150900 25 + 163458 CACATCCCCAGCCCCTCCCGTGCAT s panTro5.chr3 2625610 25 - 202621043 CACATCCCCAGCCCCTCCCGTGCAT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 44509 24 + 880730 CACATCCCCAGCCCCCCCCA-GCAT i gorGor5.CYUI01015759v1 C 0 I 61 s nomLeu3.chr11 2914953 5 - 123690457 TGCAT-------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179802883 25 - 180051392 TGCGTCCCCAGCCTCTCCCCCGTGT i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 548649 23 - 16742782 TGCGT-CCCAGCCTCTCCCCCGTG- i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1464769 25 + 91010382 TGCGTCCCCAGCCTCTCCCCCGTGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 64501 25 - 6207128 TGCGTCCCCAGCCTCTCCCCCGTGT i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 117218788 12 - 159171411 TGcatccccagc------------- i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 30802 1360 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012118799v1 466681 2934 - 514179 M e panPan2.chr3 204924092 10571 + 205426864 M a score=79283.000000 s hg38.chr3_KI270934v1_alt 150925 59 + 163458 CCCCAGCCCCTCCGCTGTGACCCCAGCA---------------CCAGccctctcccctgcttg-ccccatctctg s panTro5.chr3 2625635 59 - 202621043 CCCCAGCCCCTCCGCTGTGACCCCAGTA---------------CCAGccctctcccctgcttg-ccccatctctg i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2914958 58 - 123690457 CCCCAGCCCCTCCCCTGTGACCCCAGCA---------------CCAGCCCTCTCCTCTGctt--ccccatctctg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179802908 74 - 180051392 TCTCAACCCCTCCCCTGCATCCCCAGCTCCCTCCCCTGTGTCCCCAGccctctcccctgcttg-ccccatctctg i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 548672 69 - 16742782 TCCCAACCCCT-CCCTGCAT-CCCAGCACCTCCCCCGATGT-CCCAGccc-cttcccagcttg-ccccatct-tg i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1464794 74 + 91010382 TCTCAACCCCTCCCCTGTGTCCCCAGCACCCTCCCCTGTGTCCCCAGccctctcccctgcttg-ccccatctctg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 64526 74 - 6207128 TCCCAACCCCTCCCCTGCATCCCCAGCACCCTCCCCTGTGTCCCCAGccctctcccctgcttg-ccccatctttg i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 117218800 28 - 159171411 -----------------------------------------------cccacttccccacttacccccatctctg i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 30802 1360 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012118799v1 466681 2934 - 514179 M e gorGor5.CYUI01015759v1 44533 61 + 880730 I e panPan2.chr3 204924092 10571 + 205426864 M a score=785701.000000 s hg38.chr3_KI270934v1_alt 150984 357 + 163458 ctttctttttttcattttct-----------------ttctttccttgttttt-gagacagggtttggct--ctgtcactcaggctgg-agtgcaat-ggcacgatctcagcttactgcaaccttcacctcctgggctgaagcaattctccctcctcagcctccccagtggctgggactacaggtgcacgccaccatatccagctaattttttttttttt-------attttggtagagacagga-tttgccatg--ttgcccaggctggtctcaaattcctgagctcaagtaatcctcccacctcagcctcgcaaagtgctgggattacaggcatgagccaccgagtccaacctactttatttttctctacagtacttggaaccttct s panTro5.chr3 2625694 352 - 202621043 ctttctttttttcattttct-----------------ttctttccttattttt-gagacagggtctggct--ctgtcactcaggctgg-agtgcaat-ggcacgatctcagcttactgcaaccttcacctcctgggctgaagcaattctccctcctcagcctccccagtggctgggactacaggtgcatgccaccatacccagctaattttttttttttt------------tgtagagacagga-tttgccatg--ttgcccaggctggtctcaaattcctgagctcaagtaatcctcccacctcagcctcccaaagtgctgggattacaggcatgagccaccgagtccaacctactttatttttctctacagtacttggaaccttct i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 44594 356 + 880730 ctttctttctttctttttcttttccttccttccttccttctttctttcttttt-----cagggtcgggct--ctgtcatccaggctgg-agtgcaat-ggcgtgatcttggcttactgcaaccttcacctcctgggctcaatcaatcccccctcctcagcct-cccagtggctgggactacaggtgcacgtcaccacacccagctaatttttttt-------------------tagagacagggttttgctatg--ttgcccaggctggtctcgaactcctgagctcgagcaat-ctcccacctcagcctctc-aagtgttggaattacaggcgtgagccactgagtccagcctgctttatttttctttACAGTACTTGGAACCttct i gorGor5.CYUI01015759v1 I 61 N 0 s nomLeu3.chr11 2915016 365 - 123690457 ctttgttttttcatctttctttccttttggt------tttttttttttttttt-gagacagggtctggct--ctgtcacccaggctgg-agtgcaat-ggcacgatctcggcttactgcaaccttcacctccagggctgaagcaattctccctcctcagcctccccagtggctgggactacaggtgcatgccaccatacccagctaatttttttttttttttttttttttttttt-----------ttttttttt--tttttttgtagagacacaaattcctgagctcaagtaatcctcccacctcagcctcccaaagtgctgggattacaggtgtgagccaccgagtccaacctactttatttttctctacactacttgcaaacttct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179802982 347 - 180051392 ctttctttttttcattttc------------------tttacttttttttt---gagacagggtctggct--ttgtcacccaggctgg-agtgcaat-ggcacgatcttggcttactgcaaccttcacctccaaggctgaagcaattctccctcctcagcctccccagtggctggg--actagatgcctgccaccacacccagctaa-ttttttttttct---------tttggtagagacagga-tttgccatg--ttgcccaggctggtctcaaattcctgagctcaagtaatcctcccacct--gtctcccaaagtgccgggattacaggcatgagccgccgagtccagcctgctttatttttctttacagtacttggaaccttct i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 548741 351 - 16742782 ctttctttttttcattttct-----------------tttactttttttttctgtagacaggttctggct--ctatcaaccaggctggaagtgcaatgggcacggactcggacttatgcaa-cttca-ctcccgggctgaagcaattctccctcctcagcct-cgcagtggctgggaaatcagatgcccac--acacacccag-taa-ttttttttttct-------tatctggtagagacagga-tttgccatg--ttacccaggctggtctcaaattcctgagctcagaaatctcttccacct--gtctcccaaagtgccgggattacaggcatgagccgccgagtccagcctgctttatttttctttacagtacttggaaccttct i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1464868 350 + 91010382 ctttctttttttcattttc------------------ttt-ctttttttttct-gagacagggtctggct--ctatcacccaggctgg-agtgcaat-ggcacgatctcggcttactgcaaccttcacctcccgggctgaagcaattctccctcctcagcctccccagtggctgggactacagatg-ccgccaccacacccagctaatttttttttttct---------tttggtagagacagga-tttgccatg--ttacccaggctggtctcaaattcctgagctcaagtaatcctcccacct--gtctcccaaagtgccgggattacaggcatgagccactgagtccagcctgctttatttttctttacagtacttggaaccttct i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 64600 350 - 6207128 ctttctttttttcattttc------------------tttactttttttttct-gagacagggtctggct--ctatcacccaggctgg-agtgcaat-ggcacgatctcggcttactgcaaccttcacctcccgggctgaagcaattctccctcctcagcctccccagtggctgggactacagatgcccaccaccacacccagctaa--tttttttttct---------tttggtagagacagga-tttgccatg--ttacccaggctggtctcaaatgcctgagctcaagtaatcctcccacct--gtctcccaaagtgccgggattacaggcatgagccgccgagtccagcctgctttatttttctttacagtacttggaaccttct i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 117218828 304 - 159171411 cttt---------------------------------tttttttttttttttc-cagacagggtctgtctggctgtcacccaggctgg-agtgcaat-ggtacaatcttggcttactgccatctccgcctcccaggctcaagcaatcctcccacctaagcctccccagtggctgggaccacaggtgcatgcccccacacccaactaattttttttt-----------------gtagagacctggttttgtcgtgaccaaaccaggctggtctcgaa--------------------------------ctctcaaagtgctgggattacagatgtgagtcactgagtctggcctgctttatttttctttacagtacttggaaccttct i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 30802 1360 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012118799v1 466681 2934 - 514179 M e panPan2.chr3 204924092 10571 + 205426864 M a score=944933.000000 s hg38.chr3_KI270934v1_alt 151341 331 + 163458 aatgtactaaggacacgtgtattttctttcttttttgtcttccctagaacaggagcttaatgtgggcaggtatttttgttgatctcatttatcaccctctcccc-agttcctggaacagggtctggcacatgaatggtgtgttctaaataaatatttttaatagataaataaatGAAATATCCTACAAGAGAAAGCTA-TATCTGGAACTCACCCATCAACAGAACCTAAAAGCCAAAGACCTTTAGCCTGTCTCTGCCTCTGAAcacacccaaccccggaggagccagcagagg-------aaaaagaggaacaaaggcggggaagggagcaggtggtg s panTro5.chr3 2626046 332 - 202621043 aatgtactaaggacacgtgtattttctttcttttttgtcttccctagaacaggagcttaatgtgggcaggtatttttgttgatctcatttatcaccctctcccc-actgcctggaacagggtctggcacatgaatggtgtgttctaaataaatatttttaatagataaataaatGAAATATCCTACAAGAGAAAGCTAGTATCTGGAACTCACCCATCAACAGAACCTAAAAGCCAAAGACCTTTAGCCTGTCTCTGCCTCTGAACACACCCAACCCCGGAGGGGCCAGCAGAGG-------AAAAAGAGGAACAAAGGTGGGGAAGGGAGCAGGTGGTG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 792540 324 + 837792 aatgtactaaggacacgtgtattttctttc----ttgtcttccctagaacaggagcttaatgtgggcaggtatttttgttgatctcatttatcaccctctcccc-agtgcctggaacagggtctggcacatgaatggagtgttctaaataaatattttta----ataaataaatgaaATATCCTACAAGAGAAAGCTAGTATCTGGAACTCACCCATCAACAGAACCTAAAAGCCAAAGACCTTTAGCCTGTCTCTGCCTCTGAACACACCCAACCCCGGAAGAGCCAGCAGAGG-------AAAAAGAGCAACAAAGGTGGGGAAGGGAGCAGGTGGTG i gorGor5.CYUI01015777v1 N 0 C 0 s nomLeu3.chr11 2915381 323 - 123690457 aatgtactaaggacacgtgtattttctttctttttggtcttccctagaacaggagattaatgtgggcaggtatttttgttgatctcatttatcaccctagcccc-agtgcctggaacagggtctggcacatgaatggtgtgttct-----aatatttttg----aggaataaatgaaATACCCTACAAGAGAAAGCTAGTATCTGGAACTCACCCATcaacagaacctaaaagccaaagacctttagcctgtttccgccactgaacacacccaaccccggaggagccagcagagg-------aaaaagaggaacaaaggtggggaagggagcaggtggtg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179803329 332 - 180051392 aatgtactaaggacacgtgtattttctctctttttcgtcttccctagaacaggagcttaacgtgggcaggtatttctgttgatctcatttattaccctatcccc-agtgcctggaacagtgtctggcacatgaatggtgtgttccaaataagtatttttaatagataactaaatGAAATATCCTACAAGAGAAAGCTGGTATTTGGAACTCACCCATCAATAGAACCTAAAAGCCAAAGACCTTTAGCCTGTCTCCGCCTCTGAACACACCCAGCCCGGGAGGAGCCAGCAGAGG-------AAAAACAGGAACAAAGGTGGGGAAGGGAGCAGGTGGCG i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 549092 319 - 16742782 aacgtactaaggacacgtgtattt----tattttttgtcttccctagaacaggagcttaacgtgggcaggtatttttgttgatctcatctatcaccctatccctaagcgcctggaacagtgtctggcacatgaatggtgtgttctaaataaatatttttaatagataactaaatGAAATATCCTACAAGAGAAAGCTAGTATTTGGAACTCACCCATCAACAGAACCTAAAAGCCAAAGACCT----------TCCGCCTCTGAACACATCCAACCCCAGAGGAGCCAGCAGAGG-------AAAAACAGGAACAAAGGTGGGGAAGGGAGCAGGTGGCG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1465218 329 + 91010382 aatgtactaaggacacgtgtattt----tattttttgtcttccctagaacaggagcttaacgtgggcaggtatttttgttgatctcatctatcaccctatccctaagcacctggaacagtgtctggcacatgaatggtgtgttctaaataaatattttaaatagataaCTAAATGAAATATCCTACAAGAGAAAGCTAGTATTTGGAACTCACCCATcaacagaacctaaaagccaaagacctttagcctgtctccgcctctgaacacacccaacccgggaggagccagcagaag-------aaaaacaggaacaaaggtggggaagggagcaggtggcg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 64950 329 - 6207128 aacgtactaaggacacgtgtattt----tattttctgtcttccctagaacaggagcttaatgtgggcaggtatttttgttgatctcatctatcaccctatccctaagcgcctggaacagtgtctggcacatgaatggtgtgttctaaataaatatttttaatagataactaaatGAAATATCCTACAAGAAAAAGCTAGTATTTGGAACTCACCCATCAACAGAACCTAAAAGCCAAAGACCTTTAGCCTGTCTCCGCCTCTGAACACATCCAACCCCAGAGGAGCCAGCAGAGG-------AAAAACAGGAACAAAGGTGGGGAAGGGAGCAGGTGGCG i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 117219132 337 - 159171411 aatgtactaagtacacatgtattttc--tcttttttgtcttccctagaataggagctttacatgagcaggtatttttgtttatctcatttatcaccctatcccc-agtgcctagaacagtggctggcatgtgaatgatgtgttctaagtaaatatttttaacaaataaataaatGAAATATCCTACAAGAGAAAGCTAGTATTGGGAGCTCACCCATCAACAGAACCAAAAAGCCAGAGACCTTTAGCCTGTCCCTACCTCTGAACGCAGCCAACCCCAGAGGAGCCAGCAGAGGAAAAAAAAAAAACAGGAACAAAGGTGGGGAAGGGAACAGGTGGTG i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 30802 1360 + 100774 I e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012118799v1 466681 2934 - 514179 M e panPan2.chr3 204924092 10571 + 205426864 M a score=151631.000000 s hg38.chr3_KI270934v1_alt 151672 41 + 163458 cccaccaag-caaggaaccctgaggcttaggccgaacctgag s panTro5.chr3 2626378 41 - 202621043 CCCACCAAG-TAAGGAGCCCTGAGGCTTAGGCCGAACCTGAG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 792864 41 + 837792 CCCACCAAG-TAAGGAACCCTGAGGCTTAGGCTGAACCCGAG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2915704 41 - 123690457 cccaccaag-tgaggaaccctgaggcttaggccgaacctgag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179803661 41 - 180051392 CCCACCAAG-TAAGGACCCCTGAGGCTTAGGCCAAACCTGAG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 32162 41 + 100774 CCCACCAAG-TAAGGACCCCTGAGGCTTAGGCCAAACCTGAG i macNem1.NW_012013899v1 I 1360 C 0 s cerAty1.NW_012009470v1 549411 41 - 16742782 CCCACCAAG-TAAGGACCCCTGAGGCTTAGGCCAAACCTGAG i cerAty1.NW_012009470v1 C 0 I 5654 s chlSab2.chr4 1465547 41 + 91010382 cccaccaag-taaggacccctgaggcttaggccaaacctgag i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 65279 41 - 6207128 CCCACCAAG-TAAGGACCCCTGAGGCTTAGGCCAAACCTGAG i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 117219469 42 - 159171411 CCCGCCCAGCTAAGGACCCCCAAGGCTTAGGCTGAACTGGAG i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012118799v1 466681 2934 - 514179 M e panPan2.chr3 204924092 10571 + 205426864 M a score=592527.000000 s hg38.chr3_KI270934v1_alt 151713 226 + 163458 ctggagaagggactcatctaggaactgggtatgagattaaagtttagattggtctggcctggattttgtaacacctaaaCAAGAGTTAttctat---tctttttttgttttttt--tttttgagatggagtctca--ctgtcccccaggctggactgtagtggcgctatctcagctcactgcaacctctgcctcccaggttcaagtgattctcatgcctcagcctcccgagta s panTro5.chr3 2626419 224 - 202621043 CTGCAGAAGGGACTAATCTAGGAACTGGGTGTGAGATTAAAGTTTAGATTTGTCTGGCCTGGATTTTGTAACACCTAAACAAGAGttattctat---tctttttgtgttttttt--ttt--gagatggagtctca--ctgtcccccaggctggagtgcagtggcgctatctcagctcactgcaacctctgcctcccaggttcaagtgattctcatgcctcagcctcccgagta i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 792905 222 + 837792 CTGGAGAAGGGACTAATCTAGGAACTGGGTGTGAGATTAAAGTTTAGATTTGTCTGGCCTGGATTTTGTAACACCTAAACAAGAGttattctat---tcttttttggttttttt--ttt--gagatggagtctca--ctgtcccccaggctggagtgcagtggcgctatctcagctcactgcaacctctgcct-ccaggttcaagtgaatctcatgcctcagcct-ccgagta i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2915745 213 - 123690457 ctggagaagggactaatctaggaactgggtgtgagattaaagtttagatttgtctggcctggattttgtaacacctaaaCAAAAGTTATTCTA--------------TAttttt--ttt--gagatggaacctca--ctgtcccccaggcaggagtgcagtggcgctatctcagctcactgcaacctctgcctcccgggatcaagtgattctcatgcctcagcctcccgagta i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179803702 223 - 180051392 CTGGAGAAAAGACTAGTCTAGGAACTGGGTGTGAGATT-AAGTTTAGATTTGTCTGGCCTGGATTTTGTAACACCTAAACAAGGGttattcctt---ttttttttttttttttt--ttt--gagatggagtctca--ctgtccccaaggctggagtgcagtggtgcaatctcagctcactgcaacctctgcctcccgggttcaactgattctcatgcctcagcctcccgagtg i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 32203 220 + 100774 CTGGAGAAGAGACTAATCTAGGAACTGGGTGTGAGATT-AAGTTTAGATTTGTCTGGCCTGGATTTTGTAACACCTAAACAAGGGTTATTCCtt---ttttttttttttttttt--ttt--t---ttttGTTTAA--Ttgtccctcaggttggagtgcagtggtgcaatctcagctcactgcaacctctgcctcccggattcaagtgattctcatgcctcagcctgccgggta i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1465588 225 + 91010382 ctggagaaaggactaatctaggaactgggtgtgagatt-aagtttagatttgtctggcctggattttgtaacacctaaaCAAGGGTTATTCCAT---TATCAtttctttttttttgttt--gagatggagtctca--ctgtccccaaggctggagtgcagtggcgtgatctcagctcactgcaacctctgcctcccgggtccaactgattctcatgcctcagcctcccgagtg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 65320 222 - 6207128 CTGGAGAAGAGACTAATCTAGGAACTGGGTGTGAGATT-AAGTTTAGATTTGTCTGGCCTGGATTTTGTAACACCTAAACAAGGGTTATTCCAT---TATCAtttttcttttt---ttt--gagatggagtctca--ctgtccccaaggctggagtgcagtggcgtgatctcagctcactgcaacctctgcctcccgggtccaactgattctcatgcctcagcctcccgagtg i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 117219511 229 - 159171411 CTGGAGAAGAGACTCATCTAGGAACTGGGTGTGAGATTAAAGTTTAGATTTGTCTGGCCTGGATTTTGTAACACCTAAACATCAGTTATTCCAtttatttttgtttttgttttt--ttt--gagacagagtcttggtctgtggcccaggctggagtacaatggcacaatctcagctcactgcaacctccacctttcaggttcaggtaattctcctgcctcagcctcctgagta i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012118799v1 466681 2934 - 514179 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I e panPan2.chr3 204924092 10571 + 205426864 M a score=251509.000000 s hg38.chr3_KI270934v1_alt 151939 71 + 163458 gctgggattacaggcgcacaccaccattcccggctaa-ttttgtatttttagtagagatagagtttcaccat s panTro5.chr3 2626643 71 - 202621043 gctgggattacaggcgcacaccaccattcccagctaa-ttttgtatttttagtagagatagagtttcaccat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204934663 71 + 205426864 gctgggattacaggcgcacatcaccattcccagctaa-ttttgtatttttagtagagatagggtttcaccat i panPan2.chr3 M 10571 C 0 s gorGor5.CYUI01015777v1 793127 71 + 837792 gctgggattacaggcgcacaccaccattcctggctaa-ttttgtatttttagtagagatagggtttcaccat i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2915958 71 - 123690457 gctgggattacaggcgcacaccaccattcctggctaa-ttttgtatttttagtagagatagagtttcaccct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179803925 70 - 180051392 gct-ggattacaggcgcacaccaccattcccagctaa-ttttgtatttttagtagagatgaggtttcaccat i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 32423 71 + 100774 gctgggattacaggcgcacaccaccattcccgactaa-ttttgtatttttagtagagatgaggtttcaccat i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1465813 70 + 91010382 gct-ggattacaggtgcacaccaccattcccagctaa-ttttgtatttttagtagagatggggtttcaccat i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 65542 70 - 6207128 gct-ggattacaggcgcacaccaccattcccagctaa-ttttgtatttttagtagagatggggtttcaccat i manLeu1.NW_012109696v1 C 0 M 1053 s calJac3.chr5 117219740 71 - 159171411 gct-aggttataggcgcttgtcaccatgcccagctcatttttgtattttcattagagacggggtttcaccat i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012118799v1 466681 2934 - 514179 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=20613.000000 s hg38.chr3_KI270934v1_alt 152010 7 + 163458 gttggcc s panTro5.chr3 2626714 7 - 202621043 gttggcc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204934734 7 + 205426864 gttggcc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 793198 7 + 837792 gttggcc i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2916029 7 - 123690457 gttggcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179803995 7 - 180051392 attggcc i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 32494 7 + 100774 attgacc i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1465883 7 + 91010382 gttggcc i chlSab2.chr4 C 0 C 0 s calJac3.chr5 117219811 7 - 159171411 gttggtc i calJac3.chr5 C 0 n 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e colAng1.NW_012118799v1 466681 2934 - 514179 M e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=3807.000000 s hg38.chr3_KI270934v1_alt 152017 3 + 163458 CCC- s panTro5.chr3 2626721 4 - 202621043 CCCt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204934741 4 + 205426864 CCCt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 793205 4 + 837792 CCCt i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2916036 4 - 123690457 CCTt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179804002 4 - 180051392 aCCt i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 32501 4 + 100774 aCCt i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1465890 4 + 91010382 CCCt i chlSab2.chr4 C 0 C 0 e saiBol1.JH378155 16319759 48915 + 16417988 T e calJac3.chr5 117219818 0 - 159171411 I e colAng1.NW_012118799v1 466681 2934 - 514179 M e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=139078.000000 s hg38.chr3_KI270934v1_alt 152020 40 + 163458 ggctcacgcctgtaa--tcccagcactttgggaggccgaggt s panTro5.chr3 2626725 40 - 202621043 ggctcacgcctgtaa--tcccagcactttgggaggccgaggt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204934745 40 + 205426864 ggctcacgcctgtaa--tcccagcacgtggggaggccgaggt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 793209 40 + 837792 ggctcacgcctgtaa--tcccagcactttgggaggccggggt i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2916040 40 - 123690457 ggctcacacctgtaa--tcccagcactttgggaggctgacac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179804006 40 - 180051392 ggctcacgcctgtaa--tcccagcactttgggagaccgaggc i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 32505 42 + 100774 ggctcacgcctgtaaatcccaagcatcttgggagaccgaggc i macNem1.NW_012013899v1 C 0 I 14 s chlSab2.chr4 1465894 40 + 91010382 ggctcacgcctgtaa--tcctatcactttgggaggctgaagt i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204129692 40 + 204313951 ggctcacacctgtaa--tcccagcactttgggacgccgaggc i calJac3.chr2 T 47777 C 0 s saiBol1.JH378155 16270844 40 + 16417988 ggctcacacctgtaa--tcccagcactttgggatgccgaggt i saiBol1.JH378155 T 48915 C 0 e colAng1.NW_012118799v1 466681 2934 - 514179 M e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=23986.000000 s hg38.chr3_KI270934v1_alt 152060 11 + 163458 gggtggatcat s panTro5.chr3 2626765 11 - 202621043 gggcggatcat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204934785 11 + 205426864 gggtggatcac i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 793249 11 + 837792 gggcagatcac i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2916080 11 - 123690457 gggcagatcat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179804046 11 - 180051392 aggcagacaat i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 1465934 11 + 91010382 gcgcagatcac i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204129732 11 + 204313951 ggatggatcac i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16270884 11 + 16417988 gggtggatcat i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 32547 14 + 100774 I e colAng1.NW_012118799v1 466681 2934 - 514179 M e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=163911.000000 s hg38.chr3_KI270934v1_alt 152071 51 + 163458 gaggtcaggagattgagaccatcctg-gctaacacggtgaa--accccatctct s panTro5.chr3 2626776 51 - 202621043 gaggtcaggagattgaggccatcctg-gctaacacggtgaa--accccatctct i panTro5.chr3 C 0 C 0 s panPan2.chr3 204934796 51 + 205426864 gaggtcaggagattgagaccatcctg-gctaacacggtgaa--accccgtctct i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 793260 51 + 837792 gaggtcaggagattgagaccatccta-gctaacatggcgaa--accccatctct i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2916091 51 - 123690457 gaggtcaggagatcgagaccatcctg-gctaacacagtgaa--accccgtctcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179804057 51 - 180051392 gaggtcaggagattgagaccatccta-gctaacacagtgaa--accccatctct i rheMac8.chr6 C 0 M 20 s macNem1.NW_012013899v1 32561 53 + 100774 gaggtcaggagattga-acatccctacgcctacacagtgaaacaccccatctct i macNem1.NW_012013899v1 I 14 I 1 s chlSab2.chr4 1465945 51 + 91010382 aaggtcaggagattgagaccatcctg-gctaacacggtgaa--accccatctct i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204129743 51 + 204313951 gaggtcaggagttcaagacaagcctg-atcaacatggtgaa--atcccagctct i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16270895 51 + 16417988 gaggtcaggagttcaagaccagcctg-accaacatggtgaa--accccatctct i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 466681 2934 - 514179 M e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=248461.000000 s hg38.chr3_KI270934v1_alt 152122 110 + 163458 attaaaaatacaaaaaattagctgggcgtggtggcaggtgcctgtagtcccagctactcag-gaggctgaggc-aggagaattgcttgaactccagat-gcagaggttgcagt s panTro5.chr3 2626827 110 - 202621043 attaaaaatacaaaaaattagctgggcgtggtggcaggtgcctgtagtcccagctactcag-gaggctgaggc-aggagaattgcttgaactccagat-gcagaggttgcagt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204934847 110 + 205426864 actaaaaatataaaaaattagctgggcgtggtggcaggtgcctgtagtgccagctactcag-gaggctgaagc-aggagaatcgcttgaactccagat-gcagaggttccagt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 793311 109 + 837792 actaaaaacac-aaaaattagccaggcgtggtggcaggtgcctgtggtcccagctactcag-gaggctgaggc-aggagaatcgcttgaactccagat-gcagaggttgcagt i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2916142 110 - 123690457 actaaaaatacaaaaaatttgctgtgcatggtggcaggtgcctgtagtcccagctactcag-gaggctgaggc-aggagaatcgcttgaactccagat-gcagaggttgcagt i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012013899v1 32615 109 + 100774 actaaa---ataaaaatttagccgggcatggtggcaggcgcctgt-gacccagctactcagagaggctgaggctaggagaattgcttgaaccccggacaacggggtttgcagt i macNem1.NW_012013899v1 I 1 I 1 s chlSab2.chr4 1465996 110 + 91010382 actaaaaatacaaaaaattagctgggcgtggtggcgggcacctgtagtcccagctactcag-ggggctgaggc-aggagaatggcttgaaccccggac-gtggaggttgcagt i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204129794 100 + 204313951 actaaaaatac-aaaaattgggcgggcatagtggcggacgcctataatcccaacaactcag----------gc-aggagaatcacgtgaaccagggag-acagaggttgcagt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16270946 99 + 16417988 actaaaaatac-aaaaatagggcgggcgtggtggcgggcgcctacagtcccaactactcag----------gc-aggagaatcac-tgaaccagggag-gcagaggttgcagt i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 466681 2934 - 514179 M e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I e rheMac8.chr6 179804108 20 - 180051392 M a score=119375.000000 s hg38.chr3_KI270934v1_alt 152232 48 + 163458 gagccaagatcaatgcca-ctgcactccagcctgggtgacagggcaagc s panTro5.chr3 2626937 48 - 202621043 gagccaagatcaatgcca-ctgcactccagcctgggtgacagggcaagc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204934957 48 + 205426864 gagccaagatcaatgcca-ttgcactccagcctgggtgacagggcaagc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 793420 48 + 837792 gagccaagatcaatgcca-ttgcacgccagtctgggtgacagggtgagt i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2916252 48 - 123690457 gagccaagatcaatgcca-ttgcactccagcctcggtgacagagagagc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179804128 46 - 180051392 gagccaagatc-acgcca-ctgca-tcctgcctgggcgacaaagcgagc i rheMac8.chr6 M 20 C 0 s macNem1.NW_012013899v1 32725 46 + 100774 aagacaagatc-gcgccacctgca-tccagcctggccgat-acgcgagc i macNem1.NW_012013899v1 I 1 I 1 s chlSab2.chr4 1466106 47 + 91010382 gagccaagatc-gcgcca-ctgcactccagcctgggcgacaaagcgagc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204129894 47 + 204313951 gagctgagatc-acacca-ttgcactccagcctggacaacagagtgaga i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16271045 47 + 16417988 gagctgagatc-gcacca-ctgccctccagcctgggaatcagagtgaga i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 466681 2934 - 514179 M e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=352019.000000 s hg38.chr3_KI270934v1_alt 152280 108 + 163458 cttcatctcaa----aaacaaacaaacaaacaaacaaaaaaCCTTCAAACGAATGTAAGAATTATTATTTTTTAAAGTACAACTTT-AAAAATGCCCCTTACAAATACA---TCAG s panTro5.chr3 2626985 104 - 202621043 cttcatctcaa----aaacaaacaaacaaacaaa----aaaCCTTCAAACGAATGTAAGAATTATTATTTTTTAAAGTACAACTTT-AAAAATGCCCCTTACAAATACA---ACAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204935005 112 + 205426864 ctccatctcaaaatcaaacaaacaaacaaacaaacaaaaaaCCTTCAAACGAATGTAAGAATTATTATTTTTTAAAGTACAGCTTT-AAAAATGCCCCTTACAAATACA---TCAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 793468 108 + 837792 ctccatctcaa----aaacaaacaaacaaacaaacaaaaaaCCTTCAAATGAATGTAAGAATTATTATTTTTTAAAGTACAGCTTT-AAAAATGCCCCTTACAAATACA---TCAG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2916300 101 - 123690457 ctccatctcaa----aaacaaacaaacaaacaaa----caaCCTTCAAACGAATGTAAGA---ATTATTTTTTAAAGTACAGCTTT-AAAAATGCCCCTTACAAATACA---TCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179804174 92 - 180051392 ctccgtctcaa----aaacaaacaaaaaa---------aaaCCTTCAAAAGAATGTAAG-------ATTTTTTAAAGTACAGCTTT-AAAAATGCCCCTTACAAATACA---TCAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1616570 94 + 181584905 CTCCGTCTCAA----AAACAAAC-AAAAA---------AAACCTTCAAAAGAATGTAAG----ATTATTTTTTAAAGTACAGCTTT-AAAAATGCCCCTTACAAATACA---TCAG i macFas5.chr6 N 0 C 0 s macNem1.NW_012013899v1 32772 98 + 100774 tcccgtctcaa----aaacaaac-aataa---------aaaaCTTCAAAGAATTGTAAG----ATTATTTTTTAAAGTACAGCTTTGAAAAATGCCCCTTACAAATACGCATCCAG i macNem1.NW_012013899v1 I 1 C 0 s chlSab2.chr4 1466153 99 + 91010382 ctccgtctcaa----aaacaaacaaacaa---------aaaCCTTCAAAAGAATGTAAGAATTATTATTTTTTAAAGTACAGCTTT-AAAAATGCCCCTTACAAATACA---TCAG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204129941 92 + 204313951 ctctgtctcaa----aaaaaaaaaaagaa-------------CTTCAAAAGAATGTAAGA---ATTATTTTTAAAAGTACAGTTTC-AAAAATGCCCCTTAAAAATATA---TCAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16271092 95 + 16417988 ctctgtctcaa----aaaaaaaaaaagaa-------------CTTCAAAAGAATGTAAGAATTATTATTTTTAAAAGTACAGTTTC-AAAAATGCCCCTTAAGAATGTA---TCgg i saiBol1.JH378155 C 0 I 293 e colAng1.NW_012118799v1 466681 2934 - 514179 M e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=450996.000000 s hg38.chr3_KI270934v1_alt 152388 134 + 163458 ------TGTTATATTAAGGG-AAACCCACTTCAGAAGCAC-----------AAAGTTAATTTCTTATAATTCCAAGAAATATGTGAATGTT------------AAAAAAAA-CCCAAACACCCGA-AAAGGGATCAATCTCAAGAT-AGTTTGTAACATT-TTATTGC s panTro5.chr3 2627089 134 - 202621043 ------TGTTATATTAAGGG-AAACCCACTTCAGAAGCAC-----------AAAGTTAATTTCTTATAATTCCAAGAAATATGTGAATGTT------------AAAAAAAA-CCCAAACACCCGA-AAAGGGATCAATCTCAAGAT-AGTTTGTAATATT-TTATTGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204935117 133 + 205426864 ------TGTTATATTAAGGG-AAACCCACATCAGAAGCAC-----------AAAGTTAATTTCTTATAATTCCAAGAAATATGTGAATGTT-------------AAAAAAA-CCCAAACACCCGA-AAAGGGATCAAACTCAAGAT-AGTTTGTAACATT-TTATTGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 793576 135 + 837792 ------TGTTATATTAAGGG-AAACCCACATCAGAAGCAC-----------AAAGTTAATTTCTTATAATTCCAAGAAATATGTGAATGTC------------AAAAAAAACCCCAAACACCCGA-AAAGGGATCAAACTCAAGAT-AGTTTGTAACATT-TTATTGC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2916401 138 - 123690457 ------TGTTATATTAAGGC-AAACCCACTTCAGAAGCAC-----------AAAGTTAATTTCTTATAATTCCAAGAAACATGTGAATGTTT--------AAAAAAAAAAA-CCCAAACACCCGA-AAAGGGATCAAACTCAAGAT-AGTTTGTAACATT-TTACTGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179804266 145 - 180051392 ------TGTTATATTAAGGC-AAACCTACTTCAGAAGCAC-----------AAAGTTAATTTTTTATGATTCCAAGAAATATGTGAATGTTTaaaaaaaaaaaaaaaaaaa-CCCAAACACCCG--AAAGGGATCGAACTCAAGAT-AGTTTGTAACATT-TTATTGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1616664 145 + 181584905 ------TGTTATATTAAGGC-AAACCTACTTCAGAAGCAC-----------AAAGTTAATTTCTTATGATTCCAAGAAATATGTGAATGTTTaaaaaaaaaaaaaaaaaaa-CCCAAACACCCG--AAAGGGATCGAACTCAAGAT-AGTTTGTAACATT-TTATTGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 32870 144 + 100774 ------TGTTATATTAAGGCAAAACCTACTTCAGAAGCAC-----------AAAGTTAATTTCTTATGATTCCAAGAAATATGTGAATGTTT----AAAAAAAAAAAAACC-CCAGAACACCCGATAAGGGGATCGAACTCAAGA--AGTTTGTAACATTATTATTGC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1466252 141 + 91010382 ------TGTTATATTAAGGC-AAACCTACTTCAGAAGCAC-----------AAAGTTAATTTCTTATGATTCCAAGAAATATGTGAATGTTT-----AAAAAAAAAAAAAA-CCCAAACACCTGA-AAAGGGATCGAACTCAAGAT-AGTTTGTAACATT-TTATTGC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204130033 161 + 204313951 TGTTGTAGTTATATTAAGGC-AAACCTTCTTCAGAAGCACAGACTTGAAAAAAAGTTAATTTCTTATAATTCCAAGAAATATGTAAATGTT---AAAAAAAAAACACAAAA-CCCAAACATCCAA-AAAGGGATCAAACTCAAGATAAGTCTGTAACATG-TTATCGT i calJac3.chr2 C 0 C 0 e saiBol1.JH378155 16271187 293 + 16417988 I e colAng1.NW_012118799v1 466681 2934 - 514179 M e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=165115.000000 s hg38.chr3_KI270934v1_alt 152522 40 + 163458 AAAAA--GAAGGGCAGAGAACAG-------TCTTCTTCATACCTGTTCA s panTro5.chr3 2627223 40 - 202621043 AAAAA--GAAGGGCAGAGAACAG-------TCTTCTTCATACCTGTTCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204935250 40 + 205426864 AAAAA--GAAGGGCAGAGAACAG-------TCTTCTTCATACCTGTTCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 793711 40 + 837792 AAAAA--GAAGGGCAGATAACAG-------TCTTCTTCATACCTGTTCA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2916539 43 - 123690457 AAAAA--GAAGGGCAGAGAACAG----CCTTCTTCTTCATACCTGTTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179804411 43 - 180051392 AAAAA--GAAGGGCAGAGAACAG----TTTTCTTCTTCATACCTGTTTA i rheMac8.chr6 C 0 I 10 s macFas5.chr6 1616809 43 + 181584905 AAAAA--GAAGGGCAGAGAACAG----TTTTCTTCTTCATACCTGTTTA i macFas5.chr6 C 0 I 10 s macNem1.NW_012013899v1 33014 45 + 100774 AAAAAACGAGGGGCAGAGAACAG----TTTTCTTCTTCATACCTGTTTA i macNem1.NW_012013899v1 C 0 I 24 s chlSab2.chr4 1466393 42 + 91010382 AAAAA--GAAGGGCAGAGAACAG----TTTTCTTCTTCATACCTGTTA- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204130194 44 + 204313951 AAAAA--GAAGTGCAGAGAACAG---TCTTCTTTCTTCATACCTGTTAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16271480 47 + 16417988 aaaaa--gaaGGGCAGAGAACAGCCTTCTTCTTTCTTCATACCTGTTAA i saiBol1.JH378155 I 293 C 0 e colAng1.NW_012118799v1 466681 2934 - 514179 M e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=7821.000000 s hg38.chr3_KI270934v1_alt 152562 2 + 163458 CC s panTro5.chr3 2627263 2 - 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204935290 2 + 205426864 CC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 793751 2 + 837792 CC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2916582 2 - 123690457 CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179804464 2 - 180051392 CC i rheMac8.chr6 I 10 I 2 s macFas5.chr6 1616862 2 + 181584905 CC i macFas5.chr6 I 10 I 2 s chlSab2.chr4 1466435 2 + 91010382 CC i chlSab2.chr4 C 0 I 6294 s calJac3.chr2 204130238 2 + 204313951 CC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16271527 2 + 16417988 CC i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 33059 24 + 100774 I e colAng1.NW_012118799v1 466681 2934 - 514179 M e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=-4597.000000 s hg38.chr3_KI270934v1_alt 152564 6 + 163458 ----------------GTAATA s panTro5.chr3 2627265 6 - 202621043 ----------------GCAGTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204935292 6 + 205426864 ----------------GCAGTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 793753 6 + 837792 ----------------ACAGTA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2916584 6 - 123690457 ----------------ACAGTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179804468 3 - 180051392 -------------------GAG i rheMac8.chr6 I 2 I 7 s macFas5.chr6 1616866 3 + 181584905 -------------------GAG i macFas5.chr6 I 2 I 7 s chlSab2.chr4 1472731 3 + 91010382 -------------------GTA i chlSab2.chr4 I 6294 C 0 s calJac3.chr2 204130240 22 + 204313951 GTAGACCTCCCTGAGAGCAGTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16271529 22 + 16417988 GCAGACCTCCCTGAGAGCAGTG i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 33059 24 + 100774 I e colAng1.NW_012118799v1 466681 2934 - 514179 M e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=758018.000000 s hg38.chr3_KI270934v1_alt 152570 194 + 163458 ATTTTTAGCAGCTCTCCTGTGCA-AAGA-AGTCTCATCAATCAAT-CAGCATACGGGCCAC--AAATACC---TTCTCAGTGCGG-T-------------------------------------------------TTCACCTAC-----AATACAAGCACTCAGAAGCAC----AAATTT-------AA--CTGAAGTGAGAAACCAGGCCATTTTGTAGCTTCAGTTTTTCTACCAGTAATAT----ATT--AATTTCTT-GAAATAGCCTAATA s panTro5.chr3 2627271 194 - 202621043 ATTTTTAGCAGCTCTCCTGTGCA-AAGA-AGTCTCATCAATCAAT-CAGCATACGGGCCAC--AAATACC---TTCTCAGTGCGG-T-------------------------------------------------TTCACCTAG-----AATGCAAGCACTCAGAAGCAC----AAATTT-------AA--CTGAAGTGAGAAACCAGGCCATTTTGTAGCTTCAGTTTTTCTACCAGTAATAT----ATT--AATTTCTT-GAAATAGCCTAATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204935298 194 + 205426864 ATTTTTAGTGACTCTCCTGTGCA-AAGA-GGTCTCATCAATGAAC-CAGCGTACGGGCCAC--AAATACC---TTCTCAGTGCGA-T-------------------------------------------------TTCACCTAG-----AATACAAGCACTCAGAAGCAC----AAATTT-------AA--CTGAAGTGAGAAACCAGGCCATTTTGTAGCTTCAGTTTTTCTACCAGTAATAT----ATT--AATTTCTT-GAAATAGCCTAATA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 793759 194 + 837792 ATTTTTAGCAGCTCTCCTGTACA-AAGA-AGTCTCATCAATGAAT-CAGCGTATGGGCCAC--AAATACC---TTCTCAGTGCGG-T-------------------------------------------------TTCACCTAG-----AATACGAGCACTCAGAAGCAC----AAATTT-------AA--CTGAAGTGAGAAACCACGCCATTTTGTAGCTTCAGTTTTTCTACCAGTAATAT----ATT--AATTTCTT-GAAATAGCCTAATA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2916590 194 - 123690457 ATTTTTAGCAGCTCTCCTGTGCA-AAGA-AGTCTAATCAATGAAT-CAGCGAACGGGCCAC--AAATACC---TTCTCAGTGCGG-T-------------------------------------------------TTCACCTAG-----AATACAAGCACTCAGAAGCAC----AAATTT-------AA--CTGAAGTGAGAAACCCGGCCATTTTGTAGCTTCAGTTTTTCTACCAATAATAC----ATT--AATTTCTT-GAAATAGCCTAATA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179804478 194 - 180051392 ATTTTTAGCAACTCTCCTGTGCA-AACA-AGTCTCATCAAGGAAT-CAGTGTACGGGCCAC--AAATACC---TTCTCAGTGCAG-T-------------------------------------------------TTCACCTAC-----AATACAAACACTCAGAAGCAC----AAATTT-------AA--CTGAGGTGAGAAACCAGGCCATTTTGTAGCTTCAGTTTTTCTACCAGTAATAT----ATT--AATTTCTT-GAAATAGCCTAATA i rheMac8.chr6 I 7 C 0 s macFas5.chr6 1616876 194 + 181584905 ATTTTTAGCAACTCTCCTGTGCA-AACA-AGTCTCATCAAGGAAT-CAGTGTACGGGCCAC--AAATACC---TTCTCAGTGCAG-T-------------------------------------------------TTCACCTAC-----AATACAAACACTCAGAAGCAC----AAATTT-------AA--CTGAGGTGAGAAACCAGGCCATTTTGTAGCTTCAGTTTTTCTACCAGTAATAT----ATT--AATTTCTT-GAAATAGCCTAACA i macFas5.chr6 I 7 C 0 s macNem1.NW_012013899v1 33083 215 + 100774 ATTTTTAGCAGCTCTCCTGTGCACAACATAGTCTCATCAAGGAATCCAGTGTACGGCCCAACGAAATACCGCTTCCTCAGTGCAGTT-------------------------------------------------TTCACCTAC-----AATACAA--AACCAGAAGCACCCAAAAATTTTTTTAAAAACCCTGAAGTGAGAAACCAGG-CATTCTGTACCTTCA-TTTTTCTACCACTAATAT----ATTTAAATTTCTTGGAAATAGCCTAATA i macNem1.NW_012013899v1 I 24 I 15 s chlSab2.chr4 1472734 194 + 91010382 ATTTTTAGCAGCTCTCCTGTGCA-AACA-AGTCTCATCAAGGAAT-AAGTGTACGGGCCCC--AAATACC---TTCTCAGTGCAG-T-------------------------------------------------TTCACCTAC-----AATACAAACACTCAGAAGCAC----AAATTT-------AA--CTGAAGTGAGAAACCCGGCCATTCTGTAGCTTCAGTTTTTCTACCAGTAATAT----ATT--AATTTCGT-GAAATAGCCTAATA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204130262 252 + 204313951 ATTTTTAGCAGCTCTCCTGTGCA-AACA-AGTCTTGTGAAGGAAC-CAGTGTATAAGCCAC--AAATACC---TTCTCAGTGCGG-CTTCACCTAGATTTTTTTTTACCTTCAGTCTAAGGTTCAATTCAGGTATATTCACCTAGATTTTAACACGAGCACTCAGAAGCAC----AAATTT-------AC--CTGAAATGAGAAACCAGGCCATTTTGCAGCTTCAGTTTTTCTGCTGGTATTATATTAATT--AATTTCTT-GATATAGCCTAATG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16271551 203 + 16417988 ATTTTTAGCAGCTCTCCTGTGCA-AACA-AGTCCTATGAAGGAAG-CACTGTACAAGCCAC--AAATACC---TTCTCACTGCGG-C-------------------------------------------------TTCACCTAGACTTTAACGCAAGCACTCAGAAGCAC----AAATTT-------AC--CTGAAATGAGAAACCAGGCCATTTTGTAACTTCAGTTTTTCTGCCAGTATTAATTAAATT--AATTTCTT-GATATAGCCTGATG i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 466681 2934 - 514179 M e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=43785.000000 s hg38.chr3_KI270934v1_alt 152764 12 + 163458 ATTTAGTTCTAC s panTro5.chr3 2627465 12 - 202621043 ATTTAGTTCTAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204935492 12 + 205426864 ATTTAGTTCTAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 793953 12 + 837792 ATTTAGTTCTAC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2916784 12 - 123690457 ATTTAGTTCTAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179804672 12 - 180051392 ATTTACTTCTAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1617070 12 + 181584905 ATTTACTTCTAC i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1472928 12 + 91010382 ATTTACTTCTAC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204130514 12 + 204313951 ATTTAGTTCTAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16271754 12 + 16417988 ATTTCGTTCTAC i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 33298 15 + 100774 I e colAng1.NW_012118799v1 466681 2934 - 514179 M e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=247711.000000 s hg38.chr3_KI270934v1_alt 152776 62 + 163458 TATCAA-AACA-GAAGCCCAA-TCTGGGAGAACAATTATTATACAAGTCAAACTAAT-TTCAATCA s panTro5.chr3 2627477 62 - 202621043 TATCAA-AACA-GAAGCCCAA-TCTGGGAGAACAATTATTATACAAGTCAAACTAAT-TTCAATCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204935504 62 + 205426864 TATCAA-AACA-GAAGCCCAA-TCTGGGAGAAGAATTATTATACAAGTCAAACTAAT-TTCAATCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 793965 62 + 837792 TATCAA-AACA-GAAGCCCAA-TCTGGGAGAACAATTATTATACAAGTCAAACTAAT-TTCAATCA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2916796 62 - 123690457 TATCAA-AACA-GAAGCCCAA-TCTGGGAGAACAATTATTATACAAGTCAAACTAAT-TTCAATCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179804684 62 - 180051392 TATCAA-AACA-GAAGCCCAA-TCTGGGAGAAAAATTTTTATAGAAGTCACACTAAT-TTCAATCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1617082 62 + 181584905 TATCAA-AACA-GAAGCCCAA-TCTGGGAGAAAAATTTTTATAGAAGTCACACTAAT-TTCAATCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 33313 65 + 100774 TATCAAGAACACGAAGTCCAA-TCTGGGAAACAATTATTCATAGAACTCACACTAATCTCCAATCA i macNem1.NW_012013899v1 I 15 I 34 s chlSab2.chr4 1472940 62 + 91010382 TATCAA-AACA-GAAGCCCAA-TCTGGGAGAACAATTTTTATAGAAGTCACACTAAT-TTCAATCA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204130526 62 + 204313951 TATC-A-AACA-GAAGCCCAATTCTGGGAGAACAATTATTATAGAAGTCAAACTAAT-TTCAATCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16271766 62 + 16417988 TATCAA-AACA-GAAGCCCAATTTTGGGAGAACAATTA-TATAGAAATCAAACTAAT-TTCAATCA i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 466681 2934 - 514179 M e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=89934.000000 s hg38.chr3_KI270934v1_alt 152838 45 + 163458 TATTAGTATAGGAATTCATATTAGTATAGGCT--AATAATTCATATT s panTro5.chr3 2627539 45 - 202621043 TATTAGTATAGGAATTCATATTAGTATAGGCT--AATAATTCATATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204935566 45 + 205426864 TATTAGTAGAGGAATTCATATTAGTATAGGCT--AATAATTCATATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 794027 45 + 837792 TATTAGTATAGGAATTCATATTAGTATAGGCT--AATAATTCATATT i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2916858 44 - 123690457 CATTAGTATAGGAATTCA-AATAGTACAGGCT--AATAATTCATATT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179804746 32 - 180051392 CATTAGTAGAGAAATTCATATTAGTATaggct--------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1617144 32 + 181584905 CATTAGTAGAGGAATTCATATTAGTATaggct--------------- i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1473002 34 + 91010382 CATTAGTAGAGGAATTCATATTAGTATAGGCTga------------- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204130588 34 + 204313951 TATTCACATAGGAATTCATATATGTATACACT--ga----------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16271828 34 + 16417988 TATTCACATAGGAATTCATATTAGTATAGGCT--ga----------- i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 33378 34 + 100774 I e colAng1.NW_012118799v1 466681 2934 - 514179 M e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=304087.000000 s hg38.chr3_KI270934v1_alt 152883 71 + 163458 AGTAgaggcgggaggatcgcttgagcctaggagttt-gagaccagcc-tgggcaagacagtgagactccatc--t s panTro5.chr3 2627584 71 - 202621043 AGTAgaggcgggaggatcgcttgagcctaggagttt-gagaccagcc-tgggcaagacagtgagactccatc--t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204935611 71 + 205426864 AGTAgaggcgggaggatcgcttgagcctaggagttt-gagaccagcc-tgggcaagacagtgagactccatc--t i panPan2.chr3 C 0 M 1251 s gorGor5.CYUI01015777v1 794072 71 + 837792 AGTAgaggcgggaggatcacttgagcctaggagttt-gagaccagcc-tgggcaagacagtgagactccatc--t i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2916902 71 - 123690457 AGTAgaggcgggaggatcgcttgggcctaggagttt-gagaccagcc-tgggcaagacaatgagactccatc--t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179804778 67 - 180051392 ----gaggcgggacgatcacttgagcctaggagttt-gagaccagcc-tgggaaagacagtgagactccatc--t i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1617176 67 + 181584905 ----gaggcgggacgatcacttgagcctaggagttt-gagaccagcc-tgggaaagacagtgagactccatc--t i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 33412 73 + 100774 aggtgaggcggg-cgatcgcttgagcctaggagtttggagaccagccttgggaaagacagtgaga-tccATCCAT i macNem1.NW_012013899v1 I 34 C 0 s chlSab2.chr4 1473036 71 + 91010382 ggctgaggcgggacgatcgcttgagcctaggagttt-gagaccagcc-tgggaaagacagtgagactccatc--t i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204130622 71 + 204313951 ggctgaggcgggaggatcgcttgagcctaggagttt-gggaccagcc-cgggcaaggcagtgagattccatc--t i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16271862 71 + 16417988 ggctgaggcgggaggatcgcttgagcctaggagttt-gggaccagcc-tgggcaaggcagtgaggttccgtc--t i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 466681 2934 - 514179 M e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=439038.000000 s hg38.chr3_KI270934v1_alt 152954 152 + 163458 ctaaTTTTTTT-TTT-AAAT-----AAAGAAACTCAGAGAGGAGAAGGAAGCGGATTGATATGTG----TCTATCCAAGCACAAATTTTGTGTGCCTGTACATACAACACGACTATGAAccttcc-ttcacgcag-ctcacaatctagtagcga--gagaaaagtac s panTro5.chr3 2627655 153 - 202621043 ctaaTTTTTTT-TTTTAAAT-----AAAGAAATTCAGAGAGGAGAAGGAAGCGGATTGATATGTG----TCTATCCAAGGACAAATTTTGTGTGCCTGTACATACAACACAACTATGAAccttcc-ttcacgcag-ctcacaatctagtagtga--gaggaaagtac i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 794143 153 + 837792 ctaaTTTTTTT-TTTTAAAT-----AAAGAAATTCAGAGAGGAGAAGGAAGCAGATTGATATGTG----TCTATCCAAGGACAAATTTTGTGTGCCTGTACATATAACACAACTATGAACTTTCC-TTCATGCAG-CTCACAATCTAGTAGCGA--GAGGGAACTAC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2916973 150 - 123690457 ---ctTTTTTT-TTTTAAAT-----AAAGAAATTCAGAGAGGAGAAGGAAGCGGATTGATATGTG----TCTATCCAAGGACAAATTTTGTGTGTCTGTACATACAACACAATTATGAACCTTCC-TCCACACAG-CTCACAATCTAGTAGCGA--GAGGGAACTAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179804845 148 - 180051392 ctaaTTATTTT-TTC-ATAT-----AAAGAAATTCAGAGAGGAGAAGGAAGTG----GATATGTG----TCTGTCCAAAGACAAATTTTGTGTGCCTGTACATACAACACAACTATGAAccttcc-ttcacgcag-ctcacaatccagtagtga--gagggaactat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1617243 152 + 181584905 ctaaTTATTTT-TTC-ATAT-----AAAGAAATTCAGAGAGGAGAAGGAAGTGGATTGATATGTG----TCTGTCCAAAGACAAATTTTGTGTGCCTGTACATACAACACAACTATGAAccttcc-ttcacgcag-ctcacaatccagtagtga--gagggaactat i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 33485 162 + 100774 CTAATTATTTT-TTT-ATATGATCCAAAGAAATTTAGAGA-GAGAAGGATACGGATTGATGTGTGGTCTTTGGCTCAAAGACAAA-TTTGTGTGTC-GTACATACAACACAACTATGAACCTTCCTTTCACGCAGTCTCACAATCCAGTAGTGAAGAGGGAAACTAT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1473107 151 + 91010382 ctaaTT-TTTT-TTT-ATAT-----AAAGAAATTCAGAGAGGAGAAGGAAGCGGATTGATATGTG----TCTGTCCAAAGACAAATTGTGTGTGCCTGTACATACAACACAACTATGAACCTTCC-TTCACGCAG-CTCACAATCCAGTAGTGA--GAGGGAACTAC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204130693 142 + 204313951 ---ctaaattt-ttt-aaat-----aaagaaaTTCAGA---GAGAAGGAAGCGAACTGGTATGTC----TGTATCCAAGGCCAAA--TTGTGTGCCTGTATGTACAACAC-ACTACGACCCTTCC-CTCACCCAG-CTCACAATCTAGCATCGA---GAGGAACTAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16271933 147 + 16417988 ---gtaCATTTGTTT-AAAT-----AAAGAAATTCAGA---GAGAAGGAAGCGAACTGGTATGTC----TCTACCCAAGGCCAAATTTTGTGTGCCTGTACATACAACACAACTACGAGCCTTCC-CTCACACAG-CTCACAACCTAGTAGCAA--GGGGGAACTAC i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 466681 2934 - 514179 M e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I e panPan2.chr3 204935682 1251 + 205426864 M a score=934403.000000 s hg38.chr3_KI270934v1_alt 153106 249 + 163458 gaaaacaTGAGCCCCCACGATGAGGAAAAAGGCGCATAT-CAGAGAAAAGAAAAATGCTGCGATGATCCAATGGCAGGAGCAGCGCGCATCCA------Ct---ttctttgt-ttttttgagatggggtttcgctctgtc--tcccaggctggagtgccgtgg-------cttgatctcagctcaatgcag-cctcaa-cctcccaggctcaagtgatcttcccatctcagcct-cccaagtagctggaactacaggcgtgcaccacta-cac s panTro5.chr3 2627808 249 - 202621043 gaaaacaTGAGCCCCCACGATGAGGAAAAAGGCGCACAT-CAGAGAAAAGAAAAATGCTGCGATGATCCAATGGCAGGAGCAGCGCGCATCCA------Ct---ttctttgt-ttttttgagatggggtttcgctctgtc--tcccaggctggagtgccgtgg-------cttgatctcagctcaatgcag-cctcaa-cctcccaggctgaagtgatcttcccatctcagcct-cccaagtagctggaactacaggcgtgcaccacta-tac i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 794296 248 + 837792 GAAAACATGAG-CCCCACGGTGAGGAAAAAGGCACACAT-CAGAGAAAAGAAAAATGCTGCGATGATCCAATGGCAGGAGCAGCGCGCATCCG------Ct---ttctttgt-ttttttgaggtggggtttcgctctgtc--tcccaggctggagtgccgtgg-------cttgatctcagctcaatgcag-cctcaa-cctcccaggctcaagtgatcttcccatctcagcct-cccaagtagctggaactacaagcgtgcaccacta-cac i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2917123 249 - 123690457 GAAAACATGAGCCCCCACGGTGAGGAAAAAGGCGCACAT-CAGAGAAAAGAAAAATGCTGCGATGATCCAATGGCAGGAGCAGCGCACATCCA------Ct---ttctttgt-ttttttgagatggggtttcgttctgtc--tcccaggctagagtgcagtgg-------cttgatctcagctcaatgcag-cctcaa-cctcccaggctcaagtgatcttcccatctcagcct-cccaagtagctgggactgcaggcgtgcaccacta-cac i nomLeu3.chr11 C 0 I 2 s rheMac8.chr6 179804993 249 - 180051392 gaaaacaTGAGACCCCACGATGAGGAAAAAGGTGCGCAT-CAGAGAAAAGAAAAATGCTGCGATGACCCAATGGCAGGAGCAGCACGCATCCA------Ct---ttctttgt-ttttttgagatagggtttcgctctgtc--tcccaggctggagtgctgtgg-------cttgatctcagctcaatgcag-cctcaa-cctcccaggctcaagtgatcttcccatctcagcct-cccaagtagctgggactacaggcgtgcaccacca-cac i rheMac8.chr6 C 0 I 318 s macFas5.chr6 1617395 249 + 181584905 gaaaacaTGAGACCCCACGATGAGGAAAAAGGTGCGCAT-CAGAGAAAAGAAAAATGCTGCGATGACCCAATGGCAGGAGCAGCACGCATCCA------Ct---ttctttgt-ttttttgagatagggtttcgctctgtc--tcccaggctggagtgctgtgg-------cttgatctcagctcaatgcag-cctcaa-cctcccaggctcaagtgatcttcccatctcagcct-cccaagtagctgggactacaggcgtgcaccacca-cac i macFas5.chr6 C 0 I 12 s macNem1.NW_012013899v1 33647 252 + 100774 GAAAACATGAGACCCCC--ATGATGAGAAAAGTGCGCATCCAGAGAAAAGAAAAATGCTGCGATGACCCAATGGCAGGAGCAACACGCATCAA------Ct---ttctttg--ttttttgagatgggtttccgctctgtcctccccaggctggagtgctgtgg-------cttgatctcagctcaatgcagccctcaaccctcccaggctc-agtgatcttcccatctcagcctccccaagtagcttggataacagcgtggcaccaccaccac i macNem1.NW_012013899v1 C 0 I 13 s chlSab2.chr4 1473258 249 + 91010382 GAAAACATGAGACCCCACGATGAGGAAAAAGGTGCGCAT-CAGAGAAAAGAAAAATGCTGCGATGACCCAGTGGCAGGGGCAGCACACATCCA------Ct---ttctttgt-ttttttgagatagggttttgctctgtc--tcccaggctggagtgcagtgg-------cttgatctcagctcaatgcag-cctcaa-cctcccaggctcaagtgatcttcccatctcagcct-cccaggaagctgggactacaggcgtgcaccacca-cac i chlSab2.chr4 C 0 I 12 s colAng1.NW_012118799v1 469615 245 - 514179 GAAAACACGAGACCCCACGATGAGGAAAAAGGTGCGCAT-CAGAGAAAAGAAAAATGCTGCGATGACCCAATGGCAGGAGCA----GCATCCA------Ct---ttctgtgt-ttttttgagatagggtttcgctctgtc--tcccaggctggagtgcagtgg-------cttgatctcagctcaatgcag-cctcaa-cctcccaggctcaagtgatcttcccatctcagcct-cccaagtagctgggacaacaggcgtgcaccacca-cac i colAng1.NW_012118799v1 M 2934 I 12 s calJac3.chr2 204130835 232 + 204313951 -----------------------------GAAGGCACGT-CGGAGACAAGAACAACGCT--GATGATCCCACGGCAGGAGCAGCATGTGTTCATGAAGCCT---GTCACTGTACACCCtgagccatggtttcgctctgtc--tcccaggctggagtacggcgggggctcagctgatctcagctcagcgcag-cctcca-cctcccaggctcaagtgatcttcctatctcagcct-cctgagtagctaggactataggcatgtaccacca-cac i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16272080 226 + 16417988 -----------------------------AGAGGCCTGC-TGAAGAAAAGAACAATGCT--CACAACCCCACGGCAGGAGCCGCGCGCGTTCACGAAGCCTGTCGTCACGGTACACCCCgagccagggtttcgctccgtc--tcctaggccggagtacagagg-------actgatctcagctcagtgcag-cctcaa-cctcccaggctcaagtgatcttccca--tcagcct-cctgagtagctaggactataggcgtgcaccacca-cac i saiBol1.JH378155 C 0 C 0 e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I e panPan2.chr3 204935682 1251 + 205426864 M a score=28142.000000 s hg38.chr3_KI270934v1_alt 153355 13 + 163458 ------------gtttacttt-ttgt s panTro5.chr3 2628057 13 - 202621043 ------------gtttagttt-ttgt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 794544 13 + 837792 ------------gtttacttt-ttgt i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2917374 13 - 123690457 ------------gtttcgttt-ttgt i nomLeu3.chr11 I 2 C 0 s macFas5.chr6 1617656 13 + 181584905 ------------gttgacttt-ttgt i macFas5.chr6 I 12 I 293 s macNem1.NW_012013899v1 33912 14 + 100774 ------------gttgactttattgt i macNem1.NW_012013899v1 I 13 C 0 s chlSab2.chr4 1473519 13 + 91010382 ------------gttggcttt-ttgt i chlSab2.chr4 I 12 C 0 s colAng1.NW_012118799v1 469872 13 - 514179 ------------gttgacttt-ttgg i colAng1.NW_012118799v1 I 12 C 0 s calJac3.chr2 204131067 25 + 204313951 ttggctaatattgtttacttt-ttgt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16272306 22 + 16417988 ttggctaaca---tttacttt-ttgt i saiBol1.JH378155 C 0 C 0 e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I e rheMac8.chr6 179805242 318 - 180051392 I e panPan2.chr3 204935682 1251 + 205426864 M a score=82914.000000 s hg38.chr3_KI270934v1_alt 153368 20 + 163458 agaaa-cagggtctc--acaatg s panTro5.chr3 2628070 20 - 202621043 agaaa-cagggtctc--acaacg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 794557 20 + 837792 agaaa-cagggtctc--acaacg i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2917387 20 - 123690457 agaaa-caggctctc--acaatg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179805560 20 - 180051392 agaaa-cagggtctc--acgatg i rheMac8.chr6 I 318 C 0 s macFas5.chr6 1617962 20 + 181584905 agaaa-cagggtctc--acgatg i macFas5.chr6 I 293 C 0 s macNem1.NW_012013899v1 33926 23 + 100774 agaaaccagggtctcggacgatg i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1473532 20 + 91010382 agaaa-cagggtctc--acgatg i chlSab2.chr4 C 0 C 0 s colAng1.NW_012118799v1 469885 20 - 514179 agaaa-cagggtctc--acgatg i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204131092 20 + 204313951 agaaa-caaggtctt--acaatg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16272328 20 + 16417988 agaaa-caaggtctt--acaatg i saiBol1.JH378155 C 0 C 0 e manLeu1.NW_012109696v1 65612 1053 - 6207128 M e cerAty1.NW_012009470v1 549452 5654 - 16742782 I e panPan2.chr3 204935682 1251 + 205426864 M a score=203478.000000 s hg38.chr3_KI270934v1_alt 153388 35 + 163458 ttgccaa-ggctggCATCCTGAAGGGCGGGTGGGGC s panTro5.chr3 2628090 35 - 202621043 ttgccaa-ggctggCATTCTGAAGGGTGGGTGGGGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 794577 35 + 837792 ttgccaa-ggcaggCATCCTGAAGGGTGGGTGGGGC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2917407 35 - 123690457 ttgccaa-ggctggCATCCTGAAGGGCAGGTGGGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179805580 35 - 180051392 ttgccaa-ggctggCATCCTGAAGGGTGGGTGGGGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1617982 35 + 181584905 ttgccaa-ggctggCATCCTGAAGGGTGGGTGGGGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 33949 36 + 100774 ttgccaacggctggcatcctgaaGGGTGGGTGGGGC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1473552 35 + 91010382 tggccaa-ggctggCATCCTGAAGGGCGGGTGCGGC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 66665 35 - 6207128 TTGCCAA-GGCTGGCATCCTGAAGGGCGGGTGGGGC i manLeu1.NW_012109696v1 M 1053 C 0 s colAng1.NW_012118799v1 469905 35 - 514179 ttgccaa-ggctggCATCCTGAAGGGCGGGTAGGGC i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204131112 35 + 204313951 ttgccaa-ggctggCATCCTGAAGGGCGGGTGGGGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16272348 35 + 16417988 ttgccaa-ggctggCATCCTGAAGGGTGGGTGGGGC i saiBol1.JH378155 C 0 C 0 e cerAty1.NW_012009470v1 549452 5654 - 16742782 I e panPan2.chr3 204935682 1251 + 205426864 M a score=2768940.000000 s hg38.chr3_KI270934v1_alt 153423 516 + 163458 TTC-ATCCTACA--GAGATGAAAGGCAGAAGAA--GCTCAGAGCCCAAAGCAA--AGGGGTGGAGGACAAGGG--CATCTTCAGAACAGAGTGGCT-CAGCTGAGACATCCAGTAGGATGCCACCAGGCAG-AGGTGTGGTGGAAAAACAC-AGGGCCACAGGGTGA-ATGCTCACATGTGAGGAGCAAACCACCACAGAACACAACAG---AAACACGGTGTACTAAATCAGGCTTCAAATCGC-AGCCC-----------------------------------------------------------------------------------TGCA-ACTTCAGAGCTACCACAGGTAACCCAGAAAGGGAGCA--CGGACAGCACC---GCCCACTGCCTGAGG-CTATGAG-ATGGACCAG-AAACCTGTGCTTACTAACAACCTGCCTTATTCCAGAAGGAATTCAGGAAACAC-AAAGACACTCACAGTACAGCAAAATAAAGTAAATGTG-AATCATGTTGGCTGAGGAGAAAGTGAAGA-GTCTAAGA--CTATGTCATAAAG--TTTACCTCT---ACTC-TAAACTCTCATTACTggtgagccaccaatctgactttaagttttct s panTro5.chr3 2628125 514 - 202621043 TTC-ACCCTACA--GAGATGAAAGGCAGAAGAA--GCTCAGAGCCCAAAGCAA--AGGGGTGGAGGACAAGGG--CATCTTCAGAACAGAGTGGCT-CAGCTGAGACATCCAGTAGGATGCCACCAGGCAG-AGGTGTGGTGGAAAAACAC-AGGGCCAC--GGTGA-ATGCTCACATGTGAGGAGCAAACCACCACAGAACACAACAG---AAACACGGTGTACTAAATCAGGCTTCAAATCAC-AGCCC-----------------------------------------------------------------------------------CGCA-ACTTCAGAGCTACCGCAGGTAACCCAGAAAGGGAGCA--CGGACAGCACC---ACCCACTGCCTGAGG-CTATAAG-ATGGACCAG-AAACCTGTGCTTACTAACAACCTGCCTTATTCCAGAAGGAATTCAGGAAACAC-AAAGACACTCACAGTACAGCAAAATAAAGTAAATGTG-AACCATGTTGGCTGAGGAGAAAGTGAAGA-GTCTAAGA--CTATGTCATAAAG--TTTACCTCT---ACTC-TAAACTCTCATTACTggcgagccaccaatctgactttaagttttct i panTro5.chr3 C 0 C 0 s panPan2.chr3 204936933 516 + 205426864 TTC-ATCCTATA--GAGATGAAAGGCAGAAGAA--GCTCAGAGCCCAAAGCAA--AGGGGTGGAGGACAAGGG--CGTCTTCAGAACAGAGTGGCT-CAGCTGAGACATCCAGTAGGATGCCACCAGGCAG-AGGTGTGGTGGAAAAACAC-AGGGCCACAGGGTGA-ATGCTCACATGTGAGGAGCAAACCACCACAGAACACGACAG---AAACACGGTGTACTAAATCAGGCTTCAAATCGC-AGCCC-----------------------------------------------------------------------------------TGCA-ACTTCAGAGCTACCGCAGGTAACCCAGAAAGGGAGCA--CGGACAGCGCC---GCCCACTGCCTGAGG-CTATGAG-ATGGACCAG-AAACCTGTGCTTACTAACAACCTGCCTTATTCCAGAAAGAATTCAGGGAACAC-AGAGACAATCACAGTACAGCAAAATAAAGTAAATGTG-AACCATGTTGGCTGAGGAGAAAGTGAAGA-GTCTAAGA--CTATGTCATAAAG--TTTACCTCT---ACTC-TAAACTCTCATTACTGGCGAGCCACCAATCTGACTTTAAGTTTTCT i panPan2.chr3 M 1251 M 2555 s gorGor5.CYUI01015777v1 794612 516 + 837792 TTC-ATCCTACA--GAGATGAAAGGCACAAGCA--GCTCAGAGCCCAAAGCAA--AGGGGTGGAGGACAAGGG--CTTCTTCAGAACAGAGTGGCT-CGGCTGAGACACCCAGTAGGATGCCACCAGGCAG-AGGTGTGGTGGAAAAACAC-AGGGCCACAGGGTGA-ATGCTCACATGTGAGGAGCAAACCACCACAGAACACAACAG---GAACACGGTGTACTAAATCAGGCTTCAAATCGC-AGCCC-----------------------------------------------------------------------------------TGCA-ACTTCAGAGCTACCACAGGTAACCCAGAAAGGGAGCA--CGGACAGCACC---GCCCACTGCCTGAGG-CTATGAG-ATGGACCAG-AAACCTGTGCTTACTAACAACCTGCCTTATTCCAGAAGGAATTCAGAAAACAC-AAAGACACTCACAGTACAGCAAAATAAAGTAAATGTG-AATCATGTTGGCTGAGGAGAAAGTGAAGA-GTCTAAGA--CTATGTCATAAAG--TTTACCTCT---ACTC-TAAACTCTCATTACTggcaagccaccaatctgactttaagttttct i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2917442 507 - 123690457 TTC-ATCCTACA--GAGATGAAAGGCAGAAGAC--GCTCAGAGCCCAAAGCAA--AGGGGTGGAGGACAAGGG--CGTCTTCAGAACAGAGTGGCT-CGGCTGAGACATCCAGTAGGAGGCCACCAGGCAG-AGGTGCGGTGGAGAA--AC-AGGGCCACGGGGTGA-ATGCTCACACGTGAGGAGCAAACCACCACCGAACACGACAG---AAACACCGTGTATTAAATCAGGCTTCAAATCGC-AGCCC-----------------------------------------------------------------------------------CGCA-ACTTGAGAGCTACCACAGGTAACCCAGAAAGGGAGCA----GATGGCACC---GCCCACTGCCTGAGG-CTACGAG-ATGGACCAG-AAACCTGTGCTTACTAACAACCTGCCTTATTCCAGAAGGAATTCAGGAAACAC-AAAGACACTCACAGTACAGCAAAATAAAGTAACTGTG-AGTCATGTTGGCTGAGGAGAAAGTGAAGA-GTCTAAGA--CTatgtcataaag--tttac--------ctc-taaactctcattactggcgagccaccaacctgactttaaattttct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179805615 507 - 180051392 TTC-ATCCTACA--GAGATGAAAGGCAGAAGCA--GCTCAGAGCCCAGAGCAA--AGGGGTTGGGGACAAGGG--CATC--TAGAACAGAGTGACT-CGGCTGAGACATCCAGCAGGATGCCACCAGGCAG-AGGTGTGGTGGAAAAACAC-AGGGCCACAGGGTGA-ATGCTCACACGTGAGGAGCAAACCACCACAGAACACGACAG---AAACACGGTGCACTACATCAGGCTTCAAATCGC-AGCCC-----------------------------------------------------------------------------------TGCA-ACTTGAGAGCTACCACAGGCAAC-CGGAAAGGGAGCA--CGGACAGCACC---GCCCACTGCCTGAGG-CTGTGAG-AC-GACCAG-AAACCTGTGCTCACTAATGACCCGCCTTATTCCAGAAGGAACTCAGGAAACAC-AAAGA----CACAGTACAGCAAAATAAAGTAAATGTT-AACCATGTTGGCTGAGGAGAAAGTGAAGAGGTCTAAGA--C--TGTCATAAAG--TTTACCTCT---ACTG-TAAACTCTCATTACTggcgagccaccaaccggactttaaattttct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1618017 507 + 181584905 TTC-ATCCTACA--GAGATGAAAGGCAGAAGCA--GCTCAGAGCCCAGAGCAA--AGGGGTTGGGGACAAGGG--CATC--CAGAACAGAGTGGCT-CGGCTGAGACATCCAGTAGGATGCCACCAGGCAG-AGGTGTGGTGGAAAAACAC-AGGGCCACAGGGTGA-ATGCTCACACGTGAGGAGCAAACCACCACAGAACACGACAG---AAACACGGTGCACTACATCAGGCTTCAAATCGC-AGCCC-----------------------------------------------------------------------------------TGCA-ACTTGAGAGCTACCACAGGCAAC-CGGAAAGGGAGCA--CGGACAGCACC---GCCCACTGCCTGAGG-CTGTGAG-AC-GACCAG-AAACCTGTGCTCACTAATGACCCGCCTTATTCCAGAAGGAACTCAGGAAACAC-AAAGA----CACAGTACAGCAAAATAAAGTAAATGTT-AACCATGTTGGCTGAGGAGAAAGTGAAGAGGTCTAAGA--C--TGTCATAAAG--TTTACCTCT---ACTC-TAAACTCTCATTACTGGCGAGCCACCAACCAGACTTTAAATTTTCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 33985 526 + 100774 TTCAATCCTACAAGAGAATGAAAGGCAGAAGCAGCGCTCAGAGCCCAGAGCAAGTAGGGGTTGGGGACAAGGGACCATC--CAGAACAGAGTGGCTCCGGCTGAGACATCCATAGGCATGCCA-CAGGCAGTCGGTGTGGTGGAAAAACACAAGGGCCACAGGGTGACATGGCTCCACGTGAGGAGCAAACCA--ACAGAACACGACAGAATAAACACGGTGCACTACATCAGGCTTC-AATCGCAAGCCC-----------------------------------------------------------------------------------TGCAGACTTGAGAG-TACCACAGGCAACGCGGAAAGGGAGCACTCGGACAGCACC---GCCCACTGCCTGAGGCCTGTGAGAAC-GACCAGAAAACCTGTGCTCACTAATGACCCGC--TATTCCAGAAGAAACTCAGAAAACAC-TAAAA----CACAGTACAGCAAAATAAAGTAAATGTTAAACCACCTTGGCTGAGGAGAAAGTGAAGAGGTCTAAGA--C--TGTCATAGAAGTTCTACCTCT---ACTCGTAACCTCTCATTAT--GCAAGCACGCAACAGGACTTTAAATTTTCT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1473587 509 + 91010382 TTC-ATCCTACA--GAGATGAAAGGCAGAAGCA--GCTCAGAGCCCAGAGCAA--AGGGGTTGGGGACAAGGG--CATC--CAGAACAGAGTGGCT-CGGCTGAGACATCCAGTAGGATGCCACCAGGCAG-GGGTGTGGTGGAAAAACAC-AGGGCCACAGGGTGA-CTGCTCACACGTGAGGAGCAAACCACCACAGAACACGACAG---AAACACGGTGCACTGAATCAGGCTTCAAATCGC-AGCCC-----------------------------------------------------------------------------------TGCA-ACTTGAGAGCTACCACCGGCAAC-CAGAAAGGGAGCA--CGGACAGCACC---GCCCACTGCCTGAGG-CTGTGAG-AC-GACCAG-AAACCTGTGCTTACTAATGACCTGCCTTATTCCAGAGAGAACTCAGGAAACAC-AAAGA----CACAGTACAGCAAAATACAGTAAATGTT-AACCATGTTGGCTGAGGAGAAAGTGAAGAGGTCTAAGACTC--TGTCACAAAG--TTTACCTCT---ACTC-TAAACTCTCATTACTGGCGCGCCACCAACCGCACTTTAAATTTTCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 66700 506 - 6207128 TTC-ATCCTACA--GAGATGAAAGGCAGAAGCA--GCTCAGAGCCCAGAGCAA--AGGGGTTGGGGACAAGGT--CATC--CAGAACAGAGTGGCT-CGGCTGAGACATCCAGTAGGATGCCACCAGGCAG-ACGTGTGGTGGAAAAACAC-AGGGCCACAGGGTGA-ACGCTCACATGTGAGGAGCAAACCACCACAGAACACGACAG---AAACACGGTGCACTACATCAGGCTTCAACTCGC-AGCCC-----------------------------------------------------------------------------------TGAA-AC-TGAGAGCTACCACAGGCAAC-CGGAAAGGGAGCA--CGGACAGCACC---GCCCACTGCCTGAGG-CTGTGAG-AC-GACCAG-AAACCTGTGCTCACTAATGACCTGCCTTATTCCAGAAGGAACTCAGGAAACAC-AAAGA----CACAGCACAGCAAAATAAAGTAAATGTT-AACCATGTTGGCTGAGGAGAAAGTGAAGAGGTCTAAGA--C--TGTCATAAAG--TTTACCTCC---ACTG-TAAACTCTCATTACTggcgagccaccaactggactttaaattttct i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 469940 502 - 514179 TTC-ATCCTACA--GAGATGAAAGGCAGAAGAA--GCTCAGAGCCCAAAGCAA--AGGGGTTGGGGACAAGG---CATC--CAGAAC--AGTGGCT-CGGCTGAGACATCCAGTAGGATGCCAGCAGGCAG-AGGTGTGGTGG-AAAACAC-AGGGCCACAGGGTGA-ATGCTCACATGTGAGGA-CAAACCGCCACAGAACACGACAG---AAACACAGTGCACTGAATCAGGCTTCAAATCGC-AGCCC-----------------------------------------------------------------------------------TGCA-ACTTGAGAGCTACCACAGGCAAC-CGGAAAGGGAGCA--CCGACAGCACC---ATCCACTGCCTGAGG-CTGTGAG-AC-GACCAG-AAACCTGCGCTTACGAATGACCTGCCTTATTCCAGAAGGAACTCAGGAGACAC-AAAGA----CACAGTACAGCAAAATACAGTAAATGTT-AACCATGTTGGCTGAGGAGAAAGTGAAGAGGTCTAAGA--C--TGTCATAAAG--TTTACCTCC---ACTC-TAAACTCTCATTACTggcgagccaccaaccggactttaacttttct i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204131147 504 + 204313951 TTC-ATCCTACA--AAGATGAAAGGCAGTGGAA--GCTAAGAGCTCAAAGCAA--AGGGGTGGGGGACAACGG--AATCTGAGGAACAAAATGTCT-GGGCTGAGACATCCAGTAGGATGCCAACAGGCAG-AGGTATGGTGGGAAAACAC-AGGGCCACAGGGTGT-ATGCTCACATGTGAGAA-------ACCATAGCACATGAGAG---AA---------ACTAAATCAGGCTTCAGATCTC-AGCC------------------------------------------------------------------------------------CGCA-GCTGGAGAGCTACCACAGGCAACACCGAAGGGGAGCA--TGGACAGCACCACAGCCCACTGCCCGAGG-CTGTGAG-AAGGACCAG-AAACCTGTACTCACTAGCAGCTGGCCTCATTTCAGAAGGAATTCAGGAAACATGAAAGACTTTCACAGTGCAGCAAAATGAAGCACCTCTT-AATTGCGTTCCCTAAGGGGAACGTGAAGC-GT-TAAGA--CCATGTCACA-AG--TTTACCTCGAAAACTC-TGAACTCTCATTACTGGTGAGCCACATATCTGACGTTAAATGTTTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16272383 597 + 16417988 TTC-ATCCTGCA--AAGATGAAAGGCAGAGGAA--GCTAAGCGCTCAAAGCAA--AGGGGTGGGGGACAAGGG--AATCTTCGGAACAAAATGGGT-GGGCTGAGACATCCAGTAGGATGCCAACAGGCAG-AGGTGTGGTGGGAAAACAC-AGGGCCACGGGGTGT-GTGCTCACATGTGAGAA-------ACCACAGCACACGAGAG---AAACATGGTGTACTAAATAAGGCTCCAAATCTC-AGCCCGCAGCTGGAGAGCTACCACAGGCAACCTAGAAAGGCACAGAACAGGAGAGAAACGTGGCGCATCAGGCTTCAGATCCCAGCCTCGCA-GCTGGAGAGCCACCACGGACAACCCAGAAGGGGAGAA--CGGACAGCGCCACGGCCCACTGCCTGAGG-CTGTGAG-AAGGACCAG-AAACCTGTACTCACTCGCAACCCGCCACATTTCAGAAGGAATTCAGGAAACACGAAAGGCATTCACAGTACAGCAAAATAAAGTACCTGTT-AATTGTGTTGGCTGAGAAGAAAGCGAAGA-GT-TAATA--CCATGTCCTA-AG--TTTACCTCAAAAATTC-CAAACTCTCATTACTggtgagccacatacctgactttaaatttttt i saiBol1.JH378155 C 0 C 0 e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=379540.000000 s hg38.chr3_KI270934v1_alt 153939 78 + 163458 agcagctaaattgaagaggaaaatgtaatcaggtaaa-gg-tttataagatgcaaacaa--aacagGACAGCCACCACAGTT s panTro5.chr3 2628639 78 - 202621043 agcagctaaattgaagaggcaaatgtaatcaggtaaa-ga-tttacaagatgcaaacaa--aacagGACAGCCACCACAGTT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 795128 78 + 837792 agcagctaaattgaagaggaaaatgtaatcaggtaaa-cg-tttataagatgcaaacaa--aacagAACAGCCACCACAGTT i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2917949 79 - 123690457 agcagctaaattgaagaggaaaatgtaatcgggtaaatgg-tttataagatgtaaataa--aacagaaaagccaccacggtt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179806122 79 - 180051392 agcagctaaattgaagaggaaaatgtaatcaggtaaatgg-tttataagacgcaaacag--aacagAACAGCCACCACAGCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1618524 79 + 181584905 AGCAGCTAAATTGAAGAGGAAAATGTAATCAGGTAAATGG-TTTATAAGACGCAAACAG--AACAGAACAGCCACCACAGCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 34511 81 + 100774 AGCAGCTAAATTGAAGAGGAAAATGT-ATCAGGTAAATGGTTTTATAAGACGCAAACAGAAAACAGAACAGCCACCACAGCT i macNem1.NW_012013899v1 C 0 I 13 s chlSab2.chr4 1474096 79 + 91010382 AGCAGCTAAATTGAAGAGGAAACTGTAATCAGGTAAATGG-CTTATAAGATGCAAACAG--AACAGAACAGCCACCACAGCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 67206 79 - 6207128 agcagctaaattgaagaggaaaatgtaatcaggtaaatgg-tttataagacgcaaacag--aacagAACAGCCACCACAGCT i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 470442 79 - 514179 agcagctaaattgaagaggaaactgtaatcaggtaaacgg-tttataagatgcaaacaa--aacagAACAGCCACCACAGCT i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204131651 68 + 204313951 AGCAGCGAAATTGAAGATGAAAATGTAATC------AGGG-TTTATAAGATGCA-------AACAGAACAGCTACCACAGCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16272980 74 + 16417988 agcagcgaaactgaagaggaaaatgtaatcaggtaaaggg-tttataagacaca-------aacagaacagctacCACAGCT i saiBol1.JH378155 C 0 C 0 e cerAty1.NW_012009470v1 549452 5654 - 16742782 I e panPan2.chr3 204937449 2555 + 205426864 M a score=43394.000000 s hg38.chr3_KI270934v1_alt 154017 12 + 163458 TCTGAGAAGACG s panTro5.chr3 2628717 12 - 202621043 GCTGAGAACACG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 795206 12 + 837792 GCTGAGAACACG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2918028 12 - 123690457 gctgagaagacg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179806201 12 - 180051392 GCTGAGCACACA i rheMac8.chr6 C 0 I 1 s macFas5.chr6 1618603 12 + 181584905 GCTGAGCACACA i macFas5.chr6 C 0 I 1 s chlSab2.chr4 1474175 12 + 91010382 GCTGAGCACACA i chlSab2.chr4 C 0 I 1 s manLeu1.NW_012109696v1 67285 12 - 6207128 GCTGAGCACACA i manLeu1.NW_012109696v1 C 0 I 1 s colAng1.NW_012118799v1 470521 12 - 514179 GCTGAGAACACA i colAng1.NW_012118799v1 C 0 I 1 s calJac3.chr2 204131719 12 + 204313951 GCTGAGAACTCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16273054 12 + 16417988 GCTGAGACCACG i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 34592 13 + 100774 I e cerAty1.NW_012009470v1 549452 5654 - 16742782 I e panPan2.chr3 204937449 2555 + 205426864 M a score=817207.000000 s hg38.chr3_KI270934v1_alt 154029 157 + 163458 CGCAGCTCCAGCTCCA-GGAGAAA--CAGGGTGG--CCATCTCCTGGGGCTGCCCCGCAGCAGGTGTGTCAGCCCCAAAGCCAGCGTCTCTCAGGGTGAACGGTGACTATGGGCTTCATGGGGCCACACA-CCTCCAGTACAAGCTGAGGA-AATCTCCCA--GGG s panTro5.chr3 2628729 157 - 202621043 CGCAGCTCCAGCTCCA-GGAGAAA--CAGGGTGG--CCATCTCCTGGGGCTGCCCCGCAGCAGGCGTGTGAGCCCCAAAGCCAGCGTCTCTCAGGGTGAACGGTGACTATGGGCTTCATGGGGCCACACA-CCTCCAGTACAAGCTGAGGA-AATCTCCCA--GGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 795218 157 + 837792 CGCAGCTCCAGCTCCA-GGAGAAA--CAGGGTGG--CCATCTCCTGGGGCTGCCCCGCAGCAGGCGTGTGAGCCCCAAAGCCAGCGTCTCTCAGGATGAACGGTGACTACGGGCTTCATGGGGCCACACG-CCTCCAGTACAAGCTGAGGA-AATCTCCCA--GGG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2918040 156 - 123690457 cgcagctCCAGCTCCA-GGAGAAA--CAGGGTGG--CCATCTCCTGGGGCTG-CCCACAGCAGGCATGTGAGCCCCAAAGCCAGCGTCTCTCAGGGTGAACCGTGACTACGGGCTTCATGGGGCCACATG-CCTCCAGCACAAGCTGAGGA-AATCTCCCA--GGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179806214 158 - 180051392 TGCAGCTCCAGCTCCAGGGAGGAA--CAGGGCGG--CCATCTCCTGGGGCTGCCCCGCAGCAGGCGTGTGAGCCCCAAAGCCAGCGTCCCTCGGGGTGGACAGTGACTACGGGCTTCATGGGGCCACATG-CCCCCAGCACAAGCTGAGGA-AATGTCCCA--GGG i rheMac8.chr6 I 1 C 0 s macFas5.chr6 1618616 158 + 181584905 TGCAGCTCCAGCTCCAGGGAGGAA--CAGGGCGG--CCATCTCCTGGGGCTGCCCCGCAGCAGGCGTGTGAGCCCCAAAGCCAGCGTCCCTCGGGGTGGACAGTGACTACGGGCTTCATGGGGCCACATG-CCCCCAGCACAAGCTGAGGA-AATGTCCCA--GGG i macFas5.chr6 I 1 C 0 s macNem1.NW_012013899v1 34605 163 + 100774 TGCAGCTCCAGCTCCAGGGAGGGAACCAGGGCGGGCCCATCTCCTGGGGCTGCCCCGCAGGCAGGGTGTGAGCCCCAAAGCCAGCGTCCTACGGGGTGGACAGTTGATAACGGC-TCAT--GGCCACATGCCCCCCAGCACAAGCTGAGGACAATGTCCCACCGGG i macNem1.NW_012013899v1 I 13 C 0 s chlSab2.chr4 1474188 158 + 91010382 TGCAGCTCCAGCTTCAGGGAGGAA--CAGGGCGG--CCATCTCCTGGGGCTGCCCCGCAGCAGGCATGTGAGCCCCAAAGCCAGCGTCCCTCAGGGTGGACAGTGACTACGGGCTTCATGGGGCCACATG-CCCCCAGCACAAGCTGAGGA-AATCTCCCA--GGG i chlSab2.chr4 I 1 C 0 s manLeu1.NW_012109696v1 67298 158 - 6207128 TGCAGCTCCAGCTCCAGGGAGGAA--CAGGGCGG--CCATCTCCTGGGGCTGCCCTGCAGCAGGTGTGTGAGCCCCAAAGCCAGCGTCCCTCAGGGTGGACAGTGACTACGGGCTTCATGGGGCCACATG-CCCCCAGCACAAGCTGAGGA-AATCTCCCA--GGG i manLeu1.NW_012109696v1 I 1 C 0 s colAng1.NW_012118799v1 470534 158 - 514179 CGCAGCTCCAGCTCCAGGGAGGAA--CAGGGCGG--CCATCTCCTGGCGCTGCCCCGCGGGAGGCGTGTGAGCCCCAAAGCCAGCGTCCCTCAGGGTGGACAGTGACTACGGGCTTCATGGGGCCACATG-CCCCCAGCACAAGCTGAGGA-AATCTCCCA--GGG i colAng1.NW_012118799v1 I 1 C 0 s calJac3.chr2 204131731 158 + 204313951 CGCAGCTCCAGCTCCAGGGAGAAA--CAGGGCGG--CCATCTCCTGGGGCTGCGCGACAGCAGGCGCGTGAGCCACAAAGCCAGCATCTCTCAGGGTCCACAGTGACTACAGGCTTCATGGGGCCACATG-CCCCCAGCACAAGCTGAGGA-AACCTCCCA--AGG i calJac3.chr2 C 0 T 885 s saiBol1.JH378155 16273066 158 + 16417988 CACAGCCCCAGCTCCAGGGAGAAA--CAGGGCTG--CCATCTCCTGGGGCTGCCCCACAGCAGGCGTGTGAGCCACAAAGCCAGCGTCTCTCAGGGTCCACGGTGACTACAGGCTTCATGGGGCCACATG-CCCCCAGCACAAGCTGAGGA-GACCTTCCA--GGG i saiBol1.JH378155 C 0 C 0 e cerAty1.NW_012009470v1 549452 5654 - 16742782 I e panPan2.chr3 204937449 2555 + 205426864 M a score=189758.000000 s hg38.chr3_KI270934v1_alt 154186 41 + 163458 CAATTCAaggaacagggtctcacaatgttgtccagg-ctggt s panTro5.chr3 2628886 41 - 202621043 CAATTCAaggaacagggtctcacaatgttgtccagg-ctggt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 795375 41 + 837792 CAATTCAaggaacagggtctcacaatgttgcccagg-ctggt i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2918196 41 - 123690457 CAATTCAaggaacagggtctcacaatgttgcccagg-ctggt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179806372 41 - 180051392 CAATTCAaggaacagggcctcacaatgttgcccagg-ctggt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1618774 41 + 181584905 CAATTCAaggaacagggcctcacaatgttgcccagg-ctggt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 34768 41 + 100774 CAAttc-aggaacagggcctcacaacgttgcccaggcctggt i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1474346 41 + 91010382 CAATTCAaggaatagggcctcacaatgttgcccagg-ctggt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 67456 41 - 6207128 CAATTCAaggaacagggcctcacaatgttgcccagg-ctggt i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 470692 41 - 514179 CAATTCAaggaacagggcctcacaatgttgcccagg-ctggt i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 16273224 39 + 16417988 CAATTCAagaaaca--gtctcacaatgttgcccagg-ctggt i saiBol1.JH378155 C 0 I 14 e calJac3.chr2 204131889 885 + 204313951 T e cerAty1.NW_012009470v1 549452 5654 - 16742782 I e panPan2.chr3 204937449 2555 + 205426864 M a score=784715.000000 s hg38.chr3_KI270934v1_alt 154227 173 + 163458 ctcaaa--------------cgatccccctgcctcggcctccca---aagtgttgggaggtcagacgtgagccactgcatctggcc----CCGCATGCACTTTATAGAGG-AGGGCTTT------------------G-CATCCTGAAGGGCGAGTGGGGC---TTCATCCTGC-----AGAGATGAAAGGCAGAGGAAGCTCAGAGCCCAAGGTAAAGGGG s panTro5.chr3 2628927 173 - 202621043 ctcaaa--------------cgatccccctgcctcggcctccca---aagtgttgggaggtcagacgtgagccactgcatctggcc----CCGCACGCACTTTATAGAGG-AGGGCTTT------------------G-CATCCTGTACGGCGGGTGGGGC---TTCATCCTGC-----AGAGATGAAAAGCAGAGGAAGCTCAGAGCCCAAGGTAAAGGGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 795416 187 + 837792 ctcaaactcctgggctcaagcgatccccctgcctcggcctccca---aagtgttgggaggtcagacgtgagccactgcatctggcc----CCGCACGCACTTTATAGAGG-AGGGCTTT------------------G-CATCCTGTACGGCCGGTGGGGC---TTCATCCTGC-----AGAGATGAAAGGCAGAGGAAGCTCAGAGCCCAAGGTAAAGGGG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2918237 188 - 123690457 ctcaaactcctgggctcaagcgatacccctgcctcggcctccca---aagtgttgggaggtcagacgtgagccactgcacctggccA---CTGCACGCATTTTATAGAGG-GGGGCTTT------------------G-CATCCTGAAGGGCAGGTGGGGC---TTCATTCTGC-----AGAGATGAAAGGCAGAGGAAGCTCAGAGCCCAAGGCAAAAGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179806413 186 - 180051392 ctcaaactcctgtgctcaagcgatccccctgcctcggcctccca---aagtgttgggaggtcaggcgtgagccactgcacctggcc----CGGCAGGCATTTTAGAGAAG-AGGGCTTT------------------G-CATCCTGAAGGGCAAGT-GGGC---TTCATCCTAC-----AGAGATGAAAGGCAGAGGAAGCTCAGAGCCCAAGGTAAAGGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1618815 186 + 181584905 ctcaaactcctgtgctcaagcgatccccctgcctcggcctccca---aagtgttgggaggtcaggcgtgagccactgcacctggcc----CGGCAGGCACTTTAGAGAAG-AGGGCTTT------------------G-CATCCTGAAGGGCAAGT-GGGC---TTCATCCTAC-----AGAGATGAAAGGCAGAGGAAGCTCAGAGCCCAAGGTAAAGGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 34809 196 + 100774 ctcaaactcctgtgctc-agcgatcccctgcctgcggccatccaaccagatgttgggaggtcaggtgtgagccactgcacctggcc----CGGCAGGCACTTTAGAGAAG-AGGGCCTT------------------GCCATCCTGAAGGGCAAGT-GGGCCCTTTCATACTATCACGAAGAGATGAAAGGCAGAGGAAGCTCAGAGCCCAAGGTAAA-GGG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1474387 186 + 91010382 ctcaaactcctgtgctcaagcgatccccctgccttggcctccca---aagtgttgggaggtcaggcgtgagccactgcacctggcc----CGGCAGGCACTTTAGAGAAG-AGGGTTTT------------------G-CATCCTGAAGGGCAAGT-GGGC---TTCATCCTAC-----AGAGATGAAAGGCAGAGGAAGCTCAGAGCCCAAGGTAAAGGGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 67497 186 - 6207128 ctcaaactcctgtgctcaagcgatccccctgccttggcctccca---aagtgttgggaggtcaggcgtgagccactgcacctggcc----CAGCAGGCACTTTAGAGAAG-AGGGCTTT------------------G-CATCCTGAAGGGCAAGT-GGGC---TTCATCCTAC-----AGAGATGAAAGGCAGAGGAAGCTCAGAGCCCAAGGTAAAGGGG i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 470733 186 - 514179 ctcaaactcctgtgctcaagtgatccccctgcctctgcctcccg---aagtgttgggaggccaggcgtgagccactgcacctggcc----CGGCAGGCACTTTAGAGAAG-AGGGCTTT------------------G-CATCCTGAAGGGCACAT-GGGC---TTCATCCTAC-----AGAGATGAAAGGCAGAGGAAGCTCAGAGCCCACGGTAAAGGGG i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204131004 196 + 204313951 --------------ctcaagtgatcttcctatctcagcctcctg---agtagctaggactataggcatgtaccaccacacttggctaatattgtttactttttgtagaaacaaggtcttacaatgttgccaaggctgg-CATCCTGAAGGGCGGGTGGGGC---TTCATCCTAC-----AAAGATGAAAGGCAGTGGAAGCTAAGAGCTCAAAGCAAAGGGG i calJac3.chr2 T 885 I 1023 s saiBol1.JH378155 16273277 154 + 16417988 --------------ctcaagcgatcctcctgccttggcccccc----agt-gttgggaC-----------ATCGCC-----TGGC-----TCGCATGCACTTTAGAGAAG-AAGGCTTT------------------G-CATCCTGAAGGGTGGATGGGGC---TTCGTTCTAC-----AGAGATGAAAGGAAGAGGAAGCTCAGAGCCCAAGGCAAAAGAG i saiBol1.JH378155 I 14 C 0 e cerAty1.NW_012009470v1 549452 5654 - 16742782 I e panPan2.chr3 204937449 2555 + 205426864 M a score=67122.000000 s hg38.chr3_KI270934v1_alt 154400 16 + 163458 GGCGCCTAACaaaagc s panTro5.chr3 2629100 16 - 202621043 GGCGCCTAACaaaagc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 795603 16 + 837792 GGCGCCTAACaaaagc i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2918425 16 - 123690457 Ggcgcctaagtaaagt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179806599 16 - 180051392 GGTGCCTAAGaaaagt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1619001 16 + 181584905 GGTGCCTAAGaaaagt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35005 16 + 100774 GGTGCCTAAGAAAAGT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1474573 16 + 91010382 GGTGCCTAAGAAAAGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 67683 16 - 6207128 GGTGCCTAAGaaaagt i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 470919 16 - 514179 GGTGCCTAAGaaaagt i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 16273431 16 + 16417988 GATGCTTAAGAAAAGT i saiBol1.JH378155 C 0 I 295 e calJac3.chr2 204131200 1023 + 204313951 I e cerAty1.NW_012009470v1 549452 5654 - 16742782 I e panPan2.chr3 204937449 2555 + 205426864 M a score=577351.000000 s hg38.chr3_KI270934v1_alt 154416 135 + 163458 gactccattggg-----accac-ggtgagagggtccccatacacagcttgggtta-agccagacactgatttcaaagtatctcaggaatggtggactcagcacctgt---caggcaattctctctct--c---aagcaggctcctggtag s panTro5.chr3 2629116 135 - 202621043 gactccattggg-----accat-ggtgagagggtcccgatacacagcttgggtta-agtcagacactgatttcaaagtatctcaggaatggtggactcagcacctgt---caggcaattctctctct--c---aagcaggctcctggtag i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 795619 135 + 837792 gactccattggg-----accac-ggtgagagggtcccgatacacagcttgggtta-agccagacactgatttcaaagtatctcaggaatggtggactcagcacctgt---caggcaattctctctct--c---aagcaggctcctggtag i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2918441 135 - 123690457 gactccattggg-----gccac-ggtgagagggtccccatacacagcttgggtta-agccagacactgatttcaaagtatctcaggaatggtggactcagcacctgt---caggcaattctctctct--c---aagcaggctcctggtag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179806615 134 - 180051392 gactccattggg-----aacac-agtgaga-ggtcccgatgcacagcttgggtta-agccagacactcatttcaaagtatctcaggaatgggggactcagcacctgt---caggcaattctctctct--c---aagcaggctcctggtag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1619017 134 + 181584905 gactccattggg-----aacac-agtgaga-ggtcccgatgcacagcttgggtta-agccagacactcatttcaaagtatctcaggaatgggggactcagcacctgt---caggcaattctctctct--c---aagcaggctcctggtag i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35021 146 + 100774 GACTCCATTGGGGAAAAAACACTAGTGAGAGGGTCCCGATGCACAGCTTGGTTAACAGCCAGACACTCCATTTCAAGTATCTCAGAAATGGGGG-CTCAGCAACTGTCAGCAGCCAATTCTCTCTCT--CGTTAAGCAGGCT-CTGGTAG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 1474589 134 + 91010382 GACTCCATTGGG-----AACAC-AGTGAGA-GGTCCCCATGCACAGCTtgggtta-agccagacactgatttcaaagtatctcaggaatggtggactcagcacccat---caggcaattctctctct--c---aagcaggctcctggtag i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 67699 136 - 6207128 gattctgttggg-----aacac-agtgaga-ggtcccgatgcacagcttgggtta-agccagacactcatttcaaagtatctcaggaatgggggactcagcacctgt---caggcaattctctctctcac---aagcaggctcctggtag i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 470935 134 - 514179 gactccactggg-----aacac-agtgaga-gatcctgatgcacagcttgggtta-agccagacactgatttcaaagtatctcaggaatggtggactcagcactcgt---cagacaattctctctct--c---aagcaggctcctggtag i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 16273742 135 + 16417988 GACTCCATTGGG-----ACCAC-GGTGAGAGggtcccaatacacagcttgggtta-agccagacactgatttcaaagtatctccgaaatggtggactcagaaccctt---caggcaattctctctct--c---aagcaggctcctggaag i saiBol1.JH378155 I 295 C 0 e calJac3.chr2 204131200 1023 + 204313951 I e cerAty1.NW_012009470v1 549452 5654 - 16742782 I e panPan2.chr3 204937449 2555 + 205426864 M a score=932493.000000 s hg38.chr3_KI270934v1_alt 154551 185 + 163458 atatttagtagcagctgaaatcaagattatgttctgactgacacttgctgagggt----taaagagc---tatatacgctttgaggaccagctgaactggggcaggactaacaccctctggtgaaaatacgggaacccaaacacacgagtcagagcaggaggtgtct--ccccc-acctccaaacAATAACGCTG s panTro5.chr3 2629251 185 - 202621043 atatttagtagcagctgaaatcaagattacattctgactgacacttgctgatggt----taaagagc---tatatatgctttgaggaccagctgaacttgggcaggactaacaccctctggtgaaaatacgggaacccaaacacacgagtcagagcaggaggtgtct--ccccc-acccccAAACAATAACGCTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204940004 185 + 205426864 ATATTTAGTAGCAGCTGAAATCAAGATTATGTTCTGATAGACACTTGCTGATGGT----TAAAGAGC---TATATACACTTTGAGGACCAGCTGAACTGGGGCAGGACTAACACCCTCTGGTGAAAATACGGGAACCCAAACACACAAGTCAGAGCAGGAGGTGTCT--CCCCA-ACCCCCAAACAATAATGCTG i panPan2.chr3 M 2555 C 0 s gorGor5.CYUI01015777v1 795754 184 + 837792 atatttagtagcagctgaaatcaagattatgttctgactgacacttgctgatggt----taaagagc---tatatatgctttgaggaccagctgaactggggcaggactaatgccctctggtgaaaatacaggaatccaaacacacgagtcagagcaggaggtgtct--ccccc-acc-ccAAACAATAATGCTG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2918576 186 - 123690457 atatttagtaccagctgaaatcaagatgatgttctgactgacacttgctgatggt----tcaagagc---tacatatgctttgaggaccagctgaactggggcaggactaacaccctctggtgaaaatacgggaacccaaacacacaagtcagagcaggaggTGTCT--CCCCCGAACCCCAAACAATAATGCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179806749 186 - 180051392 atatttagtagcagctgaaatcaacattatgttctgatagatacttgctgatgat----taaagagc---tatatatgctttgaggaccagctgaagtggggcaggactaacaccctctggtgaaaatacgggaacccaaacacacaagtcagagcaggaggtgtctg-ccccc-acccccaaacAATAATGCTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1619151 187 + 181584905 atatttagtagcagctgaaatcaacattatgttctgacagatacttgctgattat----taaagagc---tatatatgctttgaggaccagctgaagtggggcaggactaacaccctctggtgaaaatatgggaacccaaACACACAAGTCAGAGCAGGAGGTGTCTGCCCCCA-ACCCCCAAACAATAATGCTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35167 187 + 100774 ATATTTAGTA-CAGCTGAAACCAACATTATGTTCTGACGATAGCTTGCTGATGAT----TAAAGAGTCTATAGATCTGCTTTGAGGACCAGCTGAAGT-GGGCAGGACTAACACCCTCCGGTGAAAATACGGGAACCCAAACACACAAGTCAGAGCAGGAGGTGTCTG-CCCCA-ACCCCCAAACAATAATGCTG i macNem1.NW_012013899v1 C 0 I 37 s chlSab2.chr4 1474723 186 + 91010382 atatttagtagcagctgaaaccaacattatgttctgacagatacttgctgatgat----taaagagc---tatatatgctttgaggaccagctgaagtggggcaggactaacaccctctggtgaaaatacgggaacccaaACACACAAGTCAGAGCAGGAGGTGTCTGCCCCCA-A-CCCCAAACAATAATGCTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 67835 187 - 6207128 ctatttagtagcagctgaaaccaacattatgttctgacagatacgtgctgatgat----taaagagc---tatatgtgctttgaggaccagctgaagtggggcaggactaacaccctctggtgaaaatatgggaacccaaACACACAAGTCAGAGCAAGAGGTGTCTGCCCCCA-ACCCCCAAACAATAATGCTG i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 471069 186 - 514179 atatttagtagcagccgaaatcaacattatgttctgacagatacttgctgatgat----taaagagc---tatatatgctttgaggaccagctgaagtggagcaggactaacaccctctggggaaaatacgggaacccaaacacacaagtcagagcaggaggtgtctg-ccccc-acccccagacAATAATGCTG i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 16273877 184 + 16417988 atatgtagcagtggctgagatcaagattatgttctggcagatacttgctaatggttaaataaagagc---tatat--gctttaaggaccagctgaactggggcaggactga--ccctctggtcagaatacaggaactcaaACAAACAAGTCAGGGCGGGGTGTCTCCTCTCCCC-ACCCCCAAACGATAATG--- i saiBol1.JH378155 C 0 C 0 e calJac3.chr2 204131200 1023 + 204313951 I e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=235275.000000 s hg38.chr3_KI270934v1_alt 154736 55 + 163458 ACCTTGGATTTGGGTTAAGTGCCTAGCCCAGGGGTGTGAGTGTTCAGGAAGTGGA s panTro5.chr3 2629436 54 - 202621043 ACCTTGGATTTGGGTTAAGTGCCTAGCCCAGCG-TGTGAGTGTTCAGTAAGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204940189 54 + 205426864 ACCTTGGATTTGGGTTAAGTGCCTAGCCCAGCG-TGTGAGTGTTCAGTAAGTGGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 795938 54 + 837792 ACCTTGGATTTGGGTTAAGTGCCTAGCCCAGCG-TGTGAGTGTTGAGTAAGTGGA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2918762 55 - 123690457 ACCTTGGATTTGGGTTAAGCGCCTAGCCCAGCGGTGTGAGCGTTCAGTACCTGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179806935 54 - 180051392 ACCCTGGATTTGGGTTAAGTGCCTAGCCCAGCA-TGTGAGTGTTCAGTAAGTGGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1619338 54 + 181584905 ACCCTGGATTTGGGTTAAGTGCCTAGCCCAGCA-TGTGAGTGTTCAGTAAGTGGA i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1474909 54 + 91010382 ACCCTGGATTTGGGTTAAGTGCCTAGCCCAGCA-TGTGAGTGTTCAGTAAGTGGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 68022 54 - 6207128 ACCCTGGATTTGGGTTAAGTGCCTAGCCCAGCA-TGTGAGTGTTCAGTAAGTGGA i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 471255 54 - 514179 ACCCTGGATTTGGGTGAAGCGCCTAGCCCAGCG-TGTGAGTGTTCAGTAAGTGGA i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 16274061 50 + 16417988 ATCTTGGATTAGGGTTAAGTGCCTGGCCCAGTG-----AGTGCTCAGAAAGTGGA i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 35354 37 + 100774 I e calJac3.chr2 204131200 1023 + 204313951 I e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=313246.000000 s hg38.chr3_KI270934v1_alt 154791 64 + 163458 AACCATCATCACC-ATCAT--CAGGTAATGG-AAAACCATCAAAGCTTTGAGCTGGCTT-GTTAGCCAA s panTro5.chr3 2629490 64 - 202621043 AACCATCATCACC-ATCAT--CAGGTAATGG-AAAACCATCAAAGCTTTGAGCTGGCTT-GTTAGCCAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204940243 64 + 205426864 AACCATCATCACC-ATCAT--CAGGTAATGG-AAAACCATCAAAGCTTTGAGCTGGCTT-GTTAGCCAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 795992 63 + 837792 AA-CATCATCACC-ATCAT--CAGGTAATGG-AAAACCATCAAAGCTTTGAGCTGGCTT-GTTAGCCAA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2918817 63 - 123690457 AACCATCATCACC-ATCAT--CAGGTAATGG--AAACCATCAAAGCTTTGAGCTGGCTT-CTTAGCCAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179806989 61 - 180051392 ---AACCATCACC-ATCAT--TAGGTGACGG-AAAACCATCAAAGCTTTGAGCGGGCTT-GTTGGCCAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1619392 64 + 181584905 AACCATCATCACC-ATCAT--TAGGTGACGG-AAAACCATCAAAGCTTTGAGCGGGCTT-GTTGGCCAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35391 69 + 100774 AATCATCATCACCTATCATACCAGGTGACGGAAAAACCATTAAAGCTCTGAGCGGGCTTCGTTGGCCAA i macNem1.NW_012013899v1 I 37 I 16 s chlSab2.chr4 1474963 61 + 91010382 ---AACCATCACC-ATCAT--TAGGTGACGG-AAAACCATCAAAGCTTTGAGCAGGCTT-GTTGGCCAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 68076 61 - 6207128 ---AACCATCACC-ATCAT--TAGGTGATGG-AAAACCATTAAAGCTCTGAGCGGGCTT-GTTGGCCAA i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 471309 64 - 514179 AACCATCATCACC-ATCAT--TAGGTAACGG-AAAACCATCAAAGCTTTGAGCGGGCTT-GTTGGCCAA i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 16274111 64 + 16417988 AACCATCATCACC-ATCAT--TAGGTAATGG-AACACCATCAAAGATTTGAGCTGGCTT-GTTAGCCAA i saiBol1.JH378155 C 0 C 0 e calJac3.chr2 204131200 1023 + 204313951 I e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=45343.000000 s hg38.chr3_KI270934v1_alt 154855 12 + 163458 GAATAGTAGTAG s panTro5.chr3 2629554 12 - 202621043 GAATAGTAGTAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204940307 12 + 205426864 GAATAGTAGCAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 796055 12 + 837792 GAATAGTAGTAG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2918880 12 - 123690457 GAATAATGGTAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179807050 12 - 180051392 GAACAGTGGTCG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1619456 12 + 181584905 GAACAGTGGTCG i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1475024 12 + 91010382 GAACAGTGGTCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 68137 12 - 6207128 GAACAGTGGTCG i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 471373 12 - 514179 GAACAGTGGTCG i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 16274175 12 + 16417988 GAATAGTGGTAG i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 35460 16 + 100774 I e calJac3.chr2 204131200 1023 + 204313951 I e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=917426.000000 s hg38.chr3_KI270934v1_alt 154867 176 + 163458 TGTATTAGCTACTACTaatact-cacagctgacaattactgagcacttg--ctccgtgccaggaatcac-ggaggcacctcgcatgcatttcctcaatac-tccctcccagtaac-ggcgaggACACAAAACTGGTAGAGCCAGGACTGG-AATCCAGGCAGGCCCCAAGGCACTCCAGTGGA s panTro5.chr3 2629566 176 - 202621043 TGTATTAGCTACTACTaatact-cacagctgacaattactgagcacttg--ctccgtgccaggaatcac-ggaagcacctcgcatgcatttcctcaatac-tccctcccagtaac-ggcgaggACACAAAACTGGTAGAGCCAGGACTGG-AATCCAGGCAGGCCCCAAAGCACTCCAGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204940319 176 + 205426864 TGTATTAGCTACTACTaatact-cacagctgacaattactgagcacttg--ctccgtgccaggaatcat-ggaaacacctcgcatgcatttcctcaatac-tccctcccagtaac-agcgaggACACAAAACTGGTAGAGCCAGGACTGG-AATCCAGGCAGGCCCCAAAGCACTCCAGTGGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 796067 177 + 837792 TGTATTAGCTACTACTaatact-cacagctgacaattactgagcacttg--ctctgtgccaggaatcatgggaagcacctcacatgcatttcctcaattc-tccctcccagtaac-GGCACGGACACAAAACTGGTAGAGCCAGGACTGG-AATCCAGGCAGGCCCCAAGGCACTCCAGTGGA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2918892 176 - 123690457 TGTATTAGCTACTACTaatact-cacagctgacaattactgagcacttg--ctctgtgccaggaatcacgggaagcacctcgcatgcatttcctcaatac-tccctcccagtaac-ggcgaggACACAAACCtggtagagccaggactag-aatccaggcaggccccaa-gcactccagtgGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179807062 176 - 180051392 TGTATTAGCCACTACTaataat-cgcagctgacagtcactgagcacttg--ctccgtgccagg-atcacgggaagcacctcgcatgcatttcctcaatat-tccctcccagtaac-agcgaggACACAAAACTGGTAGAGCCAGGACTGG-AATCCAGGCAGGCCCCAAAGCACTCCAGTGGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1619468 177 + 181584905 TGTATTAGCCACTACTaataat-cgcagctgacagtcactgagcacttg--ctccatgccagg-atcacgggaagcacctcgcatgcatttcctcaatatcccccccccagtaac-agcgaggACACAAAACTGGTAGAGCCAGGACTGG-AATCCAGGCAGGCCCCAAAGCACTCCAGTGGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35476 178 + 100774 TGTATTAGCCACTACTAATAATGCGCAGCTGACAGTCACTGA-CACTTGGCCTCCGTGCCAGG-ATCCACGGGAACACATCGCATGCATTT-CTCAATAT--TCCTCCCAGTAACTGGCGAGGACACAAAACTGTAGACGCCAGGACTGGAAATCCAGGCAGGCCCCAAAGCACTCCAGTGGA i macNem1.NW_012013899v1 I 16 I 38 s chlSab2.chr4 1475036 176 + 91010382 TGTATTAGCCACTACTaataat-cgcagctgacagtcactgagcactcg--ctccgtgccagg-atcacgggaagcacctcgcatgcatttcctcaatat-tccctcccagtaac-agcgaggACACAAAACTGGTAGAGCCAGGACTGG-AATCCAGGCAGGCCCCAAAGCACTCCAGTGGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 68149 176 - 6207128 TGTATTAGCCACTACTaataat-cgcagctgacagtcactgagcacttg--ctccgtgccagg-atcacaggaagcacctcgcatgcatttcctcaatat-tccctcccagtaac-ggcgaggACACAAAACTGGTAGAGCCAGGACTGG-AATCCAGGCAGGCCCCAAAGCACTCCAGTGGA i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 471385 176 - 514179 TGTATTAGCCACTGCTaataac-tgcaggtgacagtcactgagcacttg--ctccgtgccagg-atcacgggaagcacctcgcatgcatttcctcaatat-tccctcccagtaac-GGCAAGGACACAAAACTGGTAGAGCCAGGACTGG-AATCCAGGCAGGCCCCAAAGCACTCCAGTGGA i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 16274187 177 + 16417988 TGTCTTAGCTACTACTACAAAT-TACAGCTGACAATTACTGAGCACTCG--CCCTGTGCCGGGAATTACGGGGAACACCTCGCATGCTTCTCCTCAATAT-TCCCTCCCAGTAAC-GGTGAGGACACAAAACTGGTAGAGCCAGGACTGG-AATCCAGGCAGGCCCCAAAGCCCCCCACTGGA i saiBol1.JH378155 C 0 C 0 e calJac3.chr2 204131200 1023 + 204313951 I e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=166081.000000 s hg38.chr3_KI270934v1_alt 155043 36 + 163458 GCCTGCCAAGGAGGGCAGGCTACCATGCTAATGAGG s panTro5.chr3 2629742 36 - 202621043 GCCTGCCAAGGAGGGCAGGCTACCATGCTAATGAGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204940495 36 + 205426864 GCCTGCCAAGGTGGGCAGGCTACCATACTAATGAGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 796244 36 + 837792 GCCTGCCAAGGTGGGCAGGCTACCATGCTAATGAGG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2919068 36 - 123690457 GCCTGCCAAGGTGGGCAGGCTATCATGCTAATGAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179807238 36 - 180051392 GCCTGCCAAGGTGGGCAGGCTTTCACGCTAATGAGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1619645 36 + 181584905 GCCTGCCAAGGTGGGCAGGCTTTCACGCTAATGAGG i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1475212 36 + 91010382 GCCTGCCAAGGTGGGCAGGCTTTCATGCTAATGAGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 68325 36 - 6207128 GCCTGCCAAGGTGGGCAGACTTTCACGCTAATGAGG i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 471561 36 - 514179 GCCTGCCAAGGTGGGCAGGCTTTCACGCTAATGAGG i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 16274364 36 + 16417988 GCCTGCCAAGGTAGGCAGGCTATCACGCTAACTAGG i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 35654 38 + 100774 I e calJac3.chr2 204131200 1023 + 204313951 I e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=420625.000000 s hg38.chr3_KI270934v1_alt 155079 87 + 163458 TCCAGT-ATTTGA----CCACCACTCCTAGTTGA-GCAAATT-AACAGAAAA-CCTAAAACTAAACTTAAAATCTAAAAATTTGAGCAAATG-CAT s panTro5.chr3 2629778 88 - 202621043 TCCAGT-ATTTGA----CCACCACTCCTAGTTGA-GCAAGTTTAACAGAAAT-CCTAAAACTAAACTTAAAATCTAAAAATTTGAGCAAATG-CAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204940531 88 + 205426864 TCCAGT-ATTTGA----CCACCACTCCTATTTGA-GCAAGTTTAACAGAAAA-CCTAAAACTAAACCTAAAATCTAAAAAGTTGAGCAAATG-CAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 796280 88 + 837792 TCCAGT-ATTTGA----CCACCACTCCTAGTTGA-GCAAGTTTAACAGAAAA-CCTAAAACTAAACTTAAAATCTAACAATTTGAGCAAATG-CAG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2919104 88 - 123690457 TCCAGT-ATTTGA----CCACCACTCCTAGTTGA-GCAAGTATGACACAAAA-CCTAAAACTAAACCTAAAATCTAAAAATTTGAGCAAATG-CAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179807274 88 - 180051392 TCCAGT-ATTTGA----CCACCACTCCTAGGTGA-GCAAGTTTAACAGAAAA-CCTAAAACTAAACCTAAAATCTAAAAACCTGAGCAAACG-CAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1619681 88 + 181584905 TCCAGT-ATTTGA----CCACCACTCCTAGGTGA-GCAAGTTTAACAGAAAA-CCTAAAACTAAACCTAAAATCTAAAAACCTGAGCAAACG-CAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35692 93 + 100774 TCCAGTAATTTGACCACCCACCCCTCCTAGGTGATGCAAGTT--ACAGAAAACCCTAAAACGAAACCTAAAA-CTAAAAACCTGAGCAAACGCCAT i macNem1.NW_012013899v1 I 38 C 0 s chlSab2.chr4 1475248 88 + 91010382 TCCAGT-ATTTGA----CCACCACTCCTAGGTGA-GCAAGTTTAACAGAAAA-CCTACAACTAAACCTAAAAGCTAAAAACCTGAGCAAACG-CAT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 68361 88 - 6207128 TCCAGT-ATTTGA----CCACCACTCCTAGGTGA-GCAAGTTTAACAGAAAA-CCTAAAACTAAACCTAAAATCTAAAAACCTGAGCAAACG-CAT i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 471597 88 - 514179 TCCAGT-ATTTGA----CCACCATTCCTAGGTGA-GCGAGTTTAACAGAaaa-cctaaaactaaacctaaaatctaaacACTTGAGCAAACG-CAT i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 16274400 87 + 16417988 TCCAGT-ATTTGA----CCACCACTCCTAGTTGA-GCAAGCTTAACGCAAAA-CTTAAAACT-GGTCAGTACTCTAAAAATCTGAGCAAATG-GAT i saiBol1.JH378155 C 0 C 0 e calJac3.chr2 204131200 1023 + 204313951 I e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=538752.000000 s hg38.chr3_KI270934v1_alt 155166 83 + 163458 AAAAAGCA-GCTGTTAAAATGGATCATAAATCTTGCATCACTCGC-------TGGAAAACCACTCAAAATAAACGTCTCTGAGACATGGCC s panTro5.chr3 2629866 83 - 202621043 AAAAAGCA-GCTGTTAAAATGGATCATAAATCTTGCATCACTCGC-------TGGAAAACCACTCAAAATAAACGTCTCTGAGACATGGCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204940619 84 + 205426864 AAAAAGCAGGCTGTTAAAATGGATCATAAATCTTGCATCACTCGC-------TGGAAAACCACTCAAAATAAACGTCTCTGAGACATGGCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 796368 84 + 837792 AAAAAGCAGGCTGTTAAAATGGATCATAAATCTTGCATCACTCGC-------TGGAAAACCACTCAAAATAAACGTCTCTGAGACATGGCC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2919192 84 - 123690457 AAAAAGCAGGCTGTTAAAATAGATCATAAATCTTGCATCACTCAC-------TGGAAAACCACTCAAAATAAATGTCTCTGAGACATGGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179807362 84 - 180051392 AAAAAGCAGGCTGTTAAAATGGATCATAAATCTTGCATCACTCAC-------TGGAAAACCACTCAAAATAAATGTCTCCGCGACATGGCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1619769 84 + 181584905 AAAAAGCAGGCTGTTAAAATGGATCATAAATCTTGCATCACTCAC-------TGGAAAACCACTCAAAATAAATGTCTCCGCGACATGGCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35785 90 + 100774 AAAAAGCAGGCTGTTAAAATGGAT-ATAAATCTTGCATCACTCACCAGGGGGTGGAAAACCACTCAAAATAAACATCTCTGCGACATGGCC i macNem1.NW_012013899v1 C 0 I 37 s chlSab2.chr4 1475336 84 + 91010382 AGAAAGCAGGCTGTTAAAATGGATCATGAACCTTGCATCACTCAC-------TGGAAAACCACTCAAAATAAATGTCTCTGCAACATGGCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 68449 83 - 6207128 A-AAAGCAGGCTGTTAAAATGGATCATAAATCTTGCATCACTCAC-------TGGAAAACCACTCAAAATAAACGTCTCTGCGACATGGCC i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 471685 84 - 514179 AAAAAGCAGGCTGTTAAAATGGATCATAAACCTTGCACCACTCAC-------TGGAAAACCACTCAAAACAAATGTCTCTGCGACATGGCC i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204132223 84 + 204313951 aaaaaGCAGGCTGCTAAAATGGATCATAAATCTTGCATCACTCAC-------TGGAAAACCTCTCAAAATGAACATCTCTGAGACATGGCC i calJac3.chr2 I 1023 C 0 s saiBol1.JH378155 16274487 84 + 16417988 AAAATGCAGGCTGCTAAAATGGATCATAAATCTTGCATCACTCAC-------TGGAAAACCTCTCAAAATGAACATCTCTGAGACATGGCC i saiBol1.JH378155 C 0 C 0 e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=175518.000000 s hg38.chr3_KI270934v1_alt 155249 32 + 163458 TCTGAGGAGGGCACTCCGTGTGGCTCGTATCA s panTro5.chr3 2629949 32 - 202621043 TCTGAGGAGGGCACTCCGTGTGGCTCGTATCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204940703 32 + 205426864 TCTGAGGAGGGCACTCCGTGTGGCTCGTATCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 796452 32 + 837792 TCTGAGGAGGGCACTCCGTGTGGCTCGTATCA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2919276 32 - 123690457 TCTGAGGAGGGCACTCCGTGTGGCTCGTATCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179807446 32 - 180051392 TCTGGGGAGGGCACTCTGTGTGGCTCGTACCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1619853 32 + 181584905 TCTGGGGAGGGCACTCTGTGTGGCTCGTACCA i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1475420 32 + 91010382 TCTGGGGAGGGCACTCTGTGAGGCTTGTATCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 68532 32 - 6207128 TCTGGGGAGGGCACTCTGTGTGGCTCGTACCA i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 471769 32 - 514179 TCTGGGGAGGGCACTCCGTGTGGCTCGTACCA i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204132307 32 + 204313951 GCTGAGGAGGGCACTCCGTGGGGCTTGTATCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16274571 32 + 16417988 CCTGAGGAGGGCACTCCATGGGGCCTGTATCA i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 35875 37 + 100774 I e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=112153.000000 s hg38.chr3_KI270934v1_alt 155281 19 + 163458 CCCTGGT-GACAAACCACGT s panTro5.chr3 2629981 19 - 202621043 CCCTGGT-GACAAACCACGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204940735 19 + 205426864 CCCTGGT-GACAAACCACGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 796484 19 + 837792 CCCTGGT-GACAAACCACGT i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2919308 19 - 123690457 CCCTGGT-GACAAACCACTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179807478 19 - 180051392 CCCTGGT-GACAAACCACTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1619885 19 + 181584905 CCCTGGT-GACAAACCACTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35912 20 + 100774 CCCTGGTGGACAAACCACTT i macNem1.NW_012013899v1 I 37 C 0 s chlSab2.chr4 1475452 19 + 91010382 CCCTGGT-GACAAACCACTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 68564 19 - 6207128 CCCTGGT-GACAAACCACTT i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 471801 19 - 514179 CCCTGGT-GACAAACCACTT i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204132339 17 + 204313951 --CCAGT-GATGAACCACGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16274603 17 + 16417988 --CTGGT-GATGAACCATGT i saiBol1.JH378155 C 0 C 0 e cerAty1.NW_012009470v1 549452 5654 - 16742782 I a score=78793.000000 s hg38.chr3_KI270934v1_alt 155300 11 + 163458 G-AAC---CTGGGTG s panTro5.chr3 2630000 11 - 202621043 G-AAC---CTGGGTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204940754 11 + 205426864 G-AAC---CTGGGTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 796503 11 + 837792 G-AAC---CTGGGTG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2919327 11 - 123690457 G-AAC---CTGGGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179807497 11 - 180051392 G-AAC---CTGGGTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1619904 11 + 181584905 G-AAC---CTGGGTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35932 12 + 100774 GAAAC---CTGGGTG i macNem1.NW_012013899v1 C 0 I 28 s cerAty1.NW_012009470v1 555106 11 - 16742782 G-AAC---CTGGGTG i cerAty1.NW_012009470v1 I 5654 C 0 s chlSab2.chr4 1475471 11 + 91010382 G-AAC---CTGGGTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 68583 11 - 6207128 G-AAC---CTGGGTG i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 471820 11 - 514179 G-AAC---CTGGGTG i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204132356 11 + 204313951 G-AAC---CTGGGTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16274620 14 + 16417988 G-AATGAACCTGGTG i saiBol1.JH378155 C 0 C 0 a score=132850.000000 s hg38.chr3_KI270934v1_alt 155311 26 + 163458 GTCACCTGACCATATTGAACAGACGA s panTro5.chr3 2630011 26 - 202621043 GTCACCTGACCATATGGAACAGACGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204940765 26 + 205426864 GTCACCTGACCATATTGAACAGACGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 796514 26 + 837792 GTCACCTGACCATACTGAACAGACGA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2919338 26 - 123690457 GTCATCTGACCATATTTAACAGATGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179807508 26 - 180051392 GTCATCTGACCACATTTCACAGATGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1619915 26 + 181584905 GTCATCTGACCACATTTCACAGATGA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 555117 26 - 16742782 GTCATCTGACCACATTTCACAGATGA i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1475482 26 + 91010382 GTCGTCTGACCACATTTCACAGATGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 68594 26 - 6207128 GTCATCTGACCACATTTCACAGATGA i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 471831 26 - 514179 GTCATCGGACCACATTTCACAGATGA i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204132367 26 + 204313951 GTCATCTGACTGTATTTAACATGTGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16274634 25 + 16417988 GTCATCTGCCCGTATTTAA-ACGTGA i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 35944 28 + 100774 I a score=1480380.000000 s hg38.chr3_KI270934v1_alt 155337 217 + 163458 -----TGCACAGAGCC-------------------------ATTTGCATCCACTGTGGTCAACATTTAGGA--AGTTTTAAGCTAAGATTTGCCAAATTGTAGCCTACTGGATTCCGGGTTCTCTTGACATCTCTTTCTAGTCGCCATGT-CTTGCACTT--CCCGAGTATAAATAAACTG----AG--ATGCAAATAAAAAAA-GGAGGATTTAAGAATAATGAAAAGAGAAAAATC-AAGAAAGCACAATCACTAGTG s panTro5.chr3 2630037 217 - 202621043 -----TGCACAGAGCC-------------------------ATTTGCATCCACTGTGGTCAACATTTAGGA--AGTTTTAAGCTGAGATTTGCCAAATTGTAGCCTACTGGATTCCGGGTTCTCTTGACATCTCTTTCTAGTCGCCATGT-CTTGCACTT--CCCGAGTATAAATAAACTG----AG--ATGCAAATAAAAAAA-GGAGGATTTAAGAATAATGAAAAGACAAAAACC-AAGAAAGCACAATCACTAGTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204940791 217 + 205426864 -----TGCACAGAGCC-------------------------ATTTGCATCCACTGTGGTCAACATTTAGGA--AGTTTTAAGCTAAGATTTGCCAAATTGTAGCCTACTGGATTCCGGGTTCTCTTGACATCTCTTTCTAGTCGCCATGT-CTTGCACTT--CCCGAGTATAAATAAACTG----AG--ATGCAAATAAAAAAA-GGAGGATTTAAGAATAATGAAAAGACAAAAATC-AAGAAAGCACAATCACTAGTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 796540 216 + 837792 -----TGCACAGAGCC-------------------------ATTTGCATCCACTGTGGCCAACATTTAGGA--AGTTTTAAGCTAAGATGTGCCAAATTGTAGCCTACTGGATTCCAGGTTCTCTTGACATCTCTTTCTAGTAGCCATGG-CTTGCACTT-CCCCGAGTATAAACGAACTG----AG--ATGCAAATTAAAAAA---AGGATTTAAGAATAATGAAAAGACAAAAATC-AAGAAAGCACAATCACTAGTG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2919364 217 - 123690457 -----TGCACAGAGCC-------------------------ATTTGCATCCACTGTGGTCAACATTTAGGA--AGTTTTAAGCTAAGATTTGCCAAATTGTAGCCTACTGGATTCCAGGTTCTCTTGACATCTCTTTCTAGTAGCCACGT-CTTGCACTT--CCCGAGTATAAATGAACTG----AG--ATGCAAATAAAAAAA-GGAGGATTTAAGAATAATGAGAAAAGAAAAATC-AAGAAAGCACAATCACTAGCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179807534 218 - 180051392 -----TGCACAGAGCC-------------------------ATCTGCACCCACTGTGGTCAACATTTAGGA--CGTTTTAAGCTAAGATTTGCCAAATTGTAGCCTACTGGATTCCAGGTTCTCTTGACATCTTTTTCTAGTAGCCATGT-CTTGCACTT--CCCAAGTATAAAGGAACCG----AG--ATGCAAATTTAAAAAAGGAGGATTTAAGAATAATGAAAAGAGAAAAATC-AAGAAAGCACAATCACTAGAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1619941 218 + 181584905 -----TGCACAGAGCC-------------------------ATCTGCACCCACTGTGGTCAACATTTAGGA--CGTTTTAAGCTAAGATTTGCCAAATTGTAGCCTACTGGATTCCAGGTTCTCTTGACATCTTTTTCCAGTAGCCATGT-CTTGCACTT--CCCAAGTATAAAGGAACCG----AG--ATGCAAATTTAAAAAAGGAGGATTTAAGAATAATGAAAAGAGAAAAATC-AAGAAAGCACAATCACTAGAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35972 220 + 100774 -----TGCACAGAGCC-------------------------ATCTGCACCCACTGTGGTCAACATTGAGAGACCGTTTTAAGCTAAGATTTGCCAAATTGTAGCTACTGGGATTCCAGGTTCTCTTGAATTCTTTTTCTAGTAGCCATGTCCTTGCACTT--CCC-AGTATAAATGAACCG----AGGAATGCAAACCAGAAAA---AAGATTTAGACTCAATGAAAAGAGAAAAATCAAAGAAAGCACAATCCACTCAG i macNem1.NW_012013899v1 I 28 I 16 s cerAty1.NW_012009470v1 555143 218 - 16742782 -----TGCACAGAGCC-------------------------ATCTGCATCCACTGTGGTCAACATTTAGGA--CGTTTTAAGCTAAGATTTGCCAAATTGTAGCCTACTGGATTCCAGGTTCTCTTGACATCTTTTTCCAGTAGCCATGT-CTTGCACTT--CCCAAGTATAAAGGAACTG----AG--ATGCAAATTTAAAAAAGGAGGATTTAAGAATAATGAAAAGAGAAAAATC-AAGAAAGCACAATCACTAGAG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1475508 218 + 91010382 -----TGCACAGAGCC-------------------------ATCTGCATCCACTGTGGTCAACATTTAGGA--CGTTTTAAGCTAAGATTTGCCAAATTGTAGCTTACTGGATTCCAGGTTCTCTTGACATCTTTTTCCAGTAGCCATGC-CTTGCATTT--CCCAAGTATAAAGGAACTG----AG--ATGCAAATTTAAAAAAGGAGGATTTAAGAATAATGAAAAGAGAAAAATC-AAGAAAGCACAATCACTAGAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 68620 218 - 6207128 -----TGCACAGAGCC-------------------------ATCTGCATCCACTGTGGTCAACATTTAGGA--CGTTTTAAGCTAAGATTTGCCAAATTGTAGCCTACTGGATTCCAGGTTCTCTTGACATCTTTTTCCAGTAGCCATGT-CTTGCACTT--CCCAAGTATAAAGGAACTG----AG--ATGCAAATTTAAAAAAGGAGGATTTAAGAATAATGAAAAGAGAAAAATC-AAGAAAGCACATTCACTAGAG i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 471857 240 - 514179 -----TGCACAGAGCCTGtgatttcacagatgatttcacagatCTGCATCCACTGTGGTCAACATTTAGGA--CGTTTTAAGCTAAGATTTGCCAAACTGTAGCCTACTGGATTCCAGGTTCTCTTCACATCTTTTTCTAGTAGCCATGT-CTTGCACTT--CCCAAGTATAAATGAACTG----AG--ATGCAAATAGAAAAA---AGGATTTAAGAATAATGAAAAGAGAAAAATC-GAGAAAGCACAATCACTAGTG i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204132393 228 + 204313951 TGCGACACACAGAGCC-------------------------ACTTGCATCTATTGTGGTCAACATTTAGGA--CGGTTTAAGCTATGATCTGCCAAACTGCAGCCTACTGGATTCCAGCTTCTCCTGGCGCCTTTTTCTAGTGGCCCTGT-CCTGCACTTACCCCGAGTATAAATGAACTGGCAAAG--ATGCAAATTTAAAAA-GGGGGATTTAAGAATAATGAAAAGAGGAAAATC-AAGAAAGCACAATCACTGGTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16274659 226 + 16417988 TGCCACACACAGAGCC-------------------------ACTTGGATCCATTGTGGTCAACATTTAGGA--TGGTTTAATCTATGATCTGCTAAACCGTAGCCTACTGGATTCCAGGTTCTC--AACACCTTTATCCAATAGTAATGT-CCTGCACTTACCCCAAGTATAAATAAACTAGTAAAG--ATGCAAATAAAAAAA-GGGGGATTTAAGAATAATGAAAAGAGAAAAATC-AAGAAAGCACAATCACTAATG i saiBol1.JH378155 C 0 C 0 a score=79708.000000 s hg38.chr3_KI270934v1_alt 155554 13 + 163458 TAGAGATAACAGA s panTro5.chr3 2630254 13 - 202621043 TAGAGATAACAGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204941008 13 + 205426864 TAGAGATAACAGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 796756 13 + 837792 TAGAGATAACAGA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2919581 13 - 123690457 TAGAGATAACAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179807752 13 - 180051392 CAGAGATAACAGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1620159 13 + 181584905 CAGAGATAACAGA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 555361 13 - 16742782 CAGAGATAACAGA i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1475726 13 + 91010382 CAGAGATAACAGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 68838 13 - 6207128 CAGAGATAACAGA i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 472097 11 - 514179 --CCGATAACAGA i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204132621 13 + 204313951 CAGAGACAACAGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16274885 13 + 16417988 GAGAGATAACAGA i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 36192 16 + 100774 I a score=2679275.000000 s hg38.chr3_KI270934v1_alt 155567 370 + 163458 ATTTCTGAATTCCCTGAAAACAATCTATATAAATGCATGTGAAATAATACACCAGCATCTGTGGCCCATACGTCACATATTAGGAACTGAT-----AACATAAGGTAAACATGTTACTCTGAAAACACAAATCCTCACAAATCATTAGGCAGTAAGACTGAATCCAGCACCTCCCCCCC----CACCACCCACAG--------CGCAGTGAGGCAGTGTCTAGCAGCCGTAGTGCTCCCCGCGCCCCA-GTTCAGTCTCTGGCAACATCAGATACTTCCCACTAATAACGAGGAG--CCTTTCAACATTTTCACAACATCTCAAAACTGACCCCTTTTCTAGCTTAAATGGCAC-GGATCTGG-AAAGGCAAACTATACACAGAATCAGAAA s panTro5.chr3 2630267 374 - 202621043 ATTTCTGAATTCCCTGAAAACAATCTATATAAATGCATGTGAAATAATACACCAGCATCTGTGGCCCATACGTCACATATTAGGAACTGAT-----AACATAAGGTAAACATGTTACTCTGAAAACACAAATCCTCACAAATCATTAGGCAGTAAGACTGAATCCAGCACCCCCCCCCCGCCGCCCAACCCACAG--------CGCAGTGAGGCAGTGTCTAGCAGCCGTAGTGCTCCCCGCGCCCCA-GTTCAGTCTCTGGCAACATCAGATACTTCCCACTAATAACGAGGAG--CCTTTCAACATTTTCACAACATCTCAAAACTGACCCCTTTTCTAGCTTAAATGGCAC-GGATCTGG-AAAGGCAAACTATACACAGAATCAGAAA i panTro5.chr3 C 0 N 0 s panPan2.chr3 204941021 372 + 205426864 ATTTCTGAATTCCCTGAAAACAATCTATATAAATGCATGTGAAATAATACACCAGCATCTGTGGCCCATACGTCACATATTAGGAACTGAT-----AACATAAGGTAAACATGTTACTCTGAAAACACAAATCCTCACAAATCATTAGGCAGTAAGACTGAATCCAGCACCCCCCTCCG----CCCAACCCACAG--------CGCAGTGAGGCAGTGTCTAGCAGCCGTAGTGCTCCCCGCGCCCCA-GTTCAGTCTCTGGCAACATCAGATACTTCCCACTAATAACGAGGAGACCTTTTCAACATTTTCACAACATCTCAAAACTGACCCCTTTTCTAGCTTAAATGGCAC-GGATCTGG-AAAGGCAAACTATACACAGAATCAGAAA i panPan2.chr3 C 0 I 1 s gorGor5.CYUI01015777v1 796769 367 + 837792 ATTTCTGAATTCCCTGAAAACAATCTATATAAATGCATGTGAAATAATACACCAGCATCTGTGGCCCACACGTCACATATCAGGAACGGATGTCAGAATATAAGGTAAACATGTCACTCTGAAAACACAAATCCTCACAAATCATTAGGCAGTAAGGCTGAATCCAGCACC------------CCCCACCCACAG--------CGCAGCGAGGCAGTGTCTAGCAGCCGCAGTGCTCCCCGCGCCCCA-GTTCAGTCTCTGGCAACATCAGGTACTTCCCACTAAGAACGAGGAG--CCTTTCAACATTTTCACAACATCTCAAAACTGACCCCTTTTCTAGCTTCAATGGCAC-GGATCTGG-AAAGGCAAACTATACACAGAATCAGAAA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2919594 363 - 123690457 ATTTCTGAATTCCCTGAAAACAATCTACACAAATGCATGTGAAATAATACACCAGCATCTGTGACCCACACGTCACATATTAGGAACTGAT-----GTCATATGGTAAACATGTTACTCTGAAAACACAAATCCTCACAAATCATTAGGCAGTAAGGCTGAATCCAGCACC------------CCCCACCCACAG--------CGCAGTGAGGCAGTGTCTAGCAGCCGTAGTGCTCCCCGTGCCCCAGGTCCAGTCTCTGGCAACATCAGATACTTCCCACTAATAACAAGGAT--CCTTTCAACATTTTCACATCATCTCAAAACTGACCCCATTTCTAGCTTAAATGGCAC-GGATCTGG-AAAGGCAAACTATACACAGAATCAGAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179807765 368 - 180051392 ATTTCTGAATTCCCTGAAAACAATCTATATAAATGCATGTGAAATAATACACCAGCATCTGTGGCCCACACGTCACGTATCAGGAACTGATGTCAGAATATAAGGTAAACATGTTACTGTGAAAACACAAATCCTCACAAATCATTAGGCAGTAAGGCTGAATGAAGCATCC-----------CCCCAGGCACAG--------CGCAGTGAGGCAGTGTCCAGCAGCCGTAGTGCTCCCCGCGCCCCA-GTCCAGTCTCTGGCAACATCAGGTACTTCCCACTAATAACGAGGAG--CCTTTCAACATTTTCACAACATCTCAAAACCGACCCCTTTTCTAGCTTAAATGGCAC-GGATCTGG-AAAGGGAAACTATACACAGAATCGGAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1620172 368 + 181584905 ATTTCTGAATTCCCTGAAAACAATCTATATAAATGCATGTGAAATAATACACCAGCATCTGTGGCCCACACGTCACGTATCAGGAACTGATGTCAGAATATAAGGTAAACATGTTACTGTGAAAACACAAATCCTCACAAATCATTAGGCAGTAAGGCTGAATGAGGCATCC-----------CCCCACGCACAG--------CGCAGTGAGGCAGTGTCCAGCAGCCGTAGTGCTCCCCGCGCCCCA-GTCCAGTCTCTGGCAACATCAGGTACTTCCCACTAATAACGAGGAG--CCTTTCAACATTTTCACAACATCTCAAAACCGACCCCTTTTCTAGCTTAAATGGCAC-GGATCTGG-AAAGGCAAACTATACACAGAATCGGAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 36208 368 + 100774 ATTTCTGAATTCCCTGAAAACAATCTATATAAATGCATGTGAAATAATACACCAGCATCTGTGGCCCACACGTCACGTATCAGGAACTGATGTCAGAATATAAGGTAAACATGTTACTGTGGAAACACAAATCCTCACAAATCATTAGGCAGTAAGGCTGAATGAAGCATCG-----------CCCCACGCACAG--------CGCAGTGAGGCAGTGTCCAGCAGCCGTAGTGCTCCCCGCGCCCCA-GTCCAGTCTCTGGCAACATCAGGTACTTCCCACTAATAACGAGGAG--CCTTTCAACATTTTCACAACATCTCAAAACCGACCCCTTTTCTAGCTTAAATGGCAC-GGATCTGG-AAAGGGAAACTATACACAGAATCGGAAA i macNem1.NW_012013899v1 I 16 C 0 s cerAty1.NW_012009470v1 555374 368 - 16742782 ATTTCTGAATTCCCTGAAAACAATCTATATAAATGCATGTGAAATAATACACCAGCATCTGTGGCCCACACGTCACATATCAGGAACTGATGTCAGAATATAAGGTAAACATGTTACTGTGAAAACACAAATCCTCACAAATCATTAGGCAGTAAGGCTGAATGAAGCATCC-----------CCCCACGCACAG--------CGCAGTGAGGCAGTGTCCAGCAGCCATAGTGCTCCCTGCGCCCCA-GTCCAGTCTCTGGCAACATCAGATACTTCCCACTAATAACGAGGAG--CCTTTCAACATTTTCACAACATCTCAAAACCGATCCCTTTTCTAGCTTAAATCGCAC-GGATCTGG-AAAGGCAAACTATACACAGATTTAGAAA i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1475739 368 + 91010382 ATTTCTGAATTCCCTGAAAACAATCTATATAAATGCATGTGAAATAATACACCAGCATCTGTGGCCCACACGTCACATATCAGGAACTGATGTCAGAATATAAGGTAAACATGTTACTGTGAAAACACAAATCCTCACAAATCATTAGGCAGTAAGGCTGAATGAAGCATCC-----------CCCCACGCACAG--------CGCAGTGAGGCAGTGTCCAGCAGCCCTAGTGCTCCCCGCGCCCCA-GTCCAGTCTCTGGCAACATCAGGTACTTCCCACGAATAACGAGGAG--CCTTTCAACATTTTCACAACATCTCAAAACCGACCCCTTTTCGAGCTTAAATGGCAC-GGATCTGG-AAAGGGAAACTATACACAGAATCAGAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 68851 368 - 6207128 ATTTCTGAATTCCCTGAAAACAATCTATATAAATGCATGTGAAATAATACACCAGCATCTGTGGCCCACACGTCACATATCGGGAACTGATGTCAGAATATAAGGTAAACATGTTACTGTGAAAACACAAATCCTCATAAATCATTAGGCAGTAAGGCTGAATGAAGCATCC-----------CCCCACGCACAG--------CGCAGTGAGGCAGTGTCCAGCAGCCATAGTGCTCCCTGTGTCCCA-GTCCAGTCTCTGGCAACATCAGGTACTTCCCACTAATAACGAGGAG--CCTTTCAACATTTTCACAACATCTCAAAACCGACCCCTTTTCTAGCTTAAATGGCAC-GGATCTGG-AAAGGCAAACTATACACAGATTTAGAAA i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 472108 368 - 514179 ATTTCTGAATTCCCTGAAAACAATCTATATAAATGCATGTGAAATAATACACCAGCATCTGTGGCCCACACGTCACATATCAGGAACTGATGTCAGAATATAAGGTAAACATGTTACTTTGAAAACACAAATCCTCACAAATCATTAGGCAGTAAGGCTGAATCTAGCATCC-----------CCCCATGCACAG--------CGCAGTGAGGCAGTGTCCGGCAGCTGTAGTGCTCCCCGCGTCCCA-GTCCAGTCTCTGGCAACATCAGGTACTTCCCACTAATAACGAGGAG--CCTTTCAACATTTTCACAACATCTCAAAACTGACCCCTTTTCTAGCTTAAATGGCAC-GGATCTGG-AAAGGCAAACTATACACAGATTCAGAAA i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204132634 373 + 204313951 ATTTCTTAGTTCCCTGCAATCAGTCTACGTAAATGCATGTGAAATAATACCCCAGCATCCGTAGCCCACACATCACACATTAGGAAC--ATGTCAGAATACAAGGTGAACATGTCACTCTGAAAACACAAATCCTCACAAATCAATAGGCAGTAAGGCTGAATCCAGCCCCC-----------TCCCGCCCCCGCAGCACAGTCACAGTGAGGCAGCGTCTAGCAGCCATGATGCTCCCCGCACCCCA-GTCCAATCTCTGGAATCGTCAGATATTTCCCACTAATAAAGAGGAG--CCTCACAACATTTTCA---CATCTCAAAACTGACCCCCTTTCCAGCTTAAATGGCACGGGATCTGGAAAAGATAAACTATACACTGGATGGGAAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16274898 362 + 16417988 ATTTCTTAATTCCCTGCAAGCAATCTACGTAAATGTATGTGAAATAATACACCAGTATCCGTAGCCCACACATCACACGTTAGGAACTGATGTCAGAATATAAGGTAAACATGTTACTCTGAAAACACAAATCCTCACAAATCAATAGGCAGTAAGGCTGAATCTAGCCCCC-----------TCCCACCCC-----------CCCAGTAAGGCAGGGTCTAGCAGCCATGATGCTCCCCGAAACCCA-GTCCAGCCTCTGGAAACGTCAGCTACTTCCCGCTAATAAAGAAGAA--CCTCTCAACATTTTCA---CATCTCAAAACTGACCCCTTTTCCAGCTCAAATGGCAC-GGATCTGG-AAAGATAAACTATACACAGGATCAGAAA i saiBol1.JH378155 C 0 C 0 a score=4205969.000000 s hg38.chr3_KI270934v1_alt 155937 616 + 163458 AGATGACTGCCCCTGAGG-GATTACAGAAAAAGCAGCAGTCAGGTGTTCAATGAAGTAAAATGTATCCAATGATAGCTCAGGGGAGGGGG-ATCAATTGAGCTGAAACTGGCAAGAACGTAACTCCAGGGAGCTCACAACACGCCAAGGACCCAGATTTCCCGCTGCCTGAACGCCCAAT-----------------ATTCGCACACTGATAAGAA-CGCCT-CCCCATAACTCCCCTGCCAGCGCCTCCAACACCCCCAATCCTTTCCCC--AGGAACCCAGTCCCA-GTTTC-TGCAGTTCCTGTAACAGCCACGTTCCCACACAAGTGCTGCCTGAGCTCCCCAA-GCCCTCCAACAATCACCCCCCA--------------------GTGCCCTCGAAGGTCTATTCAGAGAAGTCACCAAGATGCAGTCACCCAGGAAATTCAAGGACCCCCAACTTACCAAAAGGCTTTCGGCTGGACAGA-GCTAACCTTCCTATTCCCCTCCT-AAACCTACAACCTAGTTTTCATTTCTCAAGAAGCCTTTC-------CCTGCGCTCAC-GCACGCCGTTGTTAGCTGGCTCGGTGAGGCACTCCAAGCAGTAACAGCGGTAGCCACAAAATAAACCAGAAGCATCTCCACCATGAAGCAGTAATAAT---TTGT s panTro5.chr3 202076658 612 + 202621043 AGATGAC-GGCCCTGAGGCGATTACAGAAAAAGCAGCAGTCAGGTGTTCAATGAAGTAAAATGTATCCAATGATAGCTCAGGG-AGGGGG-ATCAATTGAGCTGAAACTGGCAAGAACGTAACTCCAGGGAGCTCACAACACGC-AGGGACCCGGATTTCCCGCTGCCTGAACGCCCAAT-----------------ATTCGCACACTGATAAGAAGCGCCT-CCCCATAACTCCCCTGCCAGCGC-TCCAACACCCCCAATCCTTTCCC---AGGAACCCAGTCCCA-GTTTC-TGCAGTTCCTGTAACAGCAA-GTTCCCACACAAGTGCTGCTTGAGCTCCCCAACGCCCTCCAACAATCACCCCC-A--------------------GT-CCCT-GAAGGTCTATTCAGAGAAGTCACCAAGCTGCAGTCACCCAG-AAATTCAAG-ACCTCCAACTGACCAAAAGGCTTTCGGCTGGACAGAAGCTAACCTTCCTATTCCCCTCCT-AAACCTACAACCTAGTTTTCATTTCTCAAGAAGCCTTTC-------CCTGTGCTCAC-GCACGCAGTTGTTAGCTGGCTCGGTGAGGCACTCCAAGCAGTGACAGCGGTAGCCACAAAATAAACCAGAAGCATCTCCACCATGAAGCAGTAATAATAATTTGT i panTro5.chr3 N 0 C 0 s panPan2.chr3 204941394 622 + 205426864 AGATGACTGCCCCTGAGG-GATTACAGAAAAAGCAGCAGTCAGGTGTTCAATGAAGTAAAATGTATCCAATGATAGCTCAGGGGAGGGGG-ATCAATTGAGCTGAAACTGGCAAGAACGTAACTCCAGGGAGCTCACAACACGC-AAGGACCCGGATTTCCCGCTGCCTGAACGCCCAGT-----------------ATTCGCACACTGATAAGAA-CACCT-CCCCATAACTCCCCTGCCAGCGCCTCCAACACCCCCAATCCTTTCCCCTACGGAACCCAGCCCCACGTTTCTTGCAGTTCCTGTAACAGCCACGTTCCCACACAAGTGCTGCCTGAGCTCCCCAA-GCCCTCCAACAATCACCCCCCA--------------------GTGCCCTCGAAGGTCTATTCAGAGAAGTCACCAAGATGCAGTCACCCAGGAAATTCAAGCACCTCCAACTGACCAAAAGGCTTTCGGCTGGACAGA-GCTAACCTTCCTATTCCCCTCCT-AAACCTACAACCTAGTTTTCATTTCTCAAGAAGCCTTTC-------CCTGTGCTCAC-GCACGCAGTTGTTAGCTGGCTCGGTGAGGCACTCCAAGCAGTGACAGCGGTAGCCACAAAATAAACCAGAAGCATCTCCACCATGAAGCAGTAATAATAATTTGT i panPan2.chr3 I 1 C 0 s gorGor5.CYUI01015777v1 797136 618 + 837792 AGATGACTGCCCCTGAGG-GATTACAGAAAAAGCAGCAGTCAGGTGTTCAATGAAGTAAAATGTATCCAATGAGAGCTCAGGGGAGGGGG-ATCAATTGAGCTGAAACTGGCAAGAACGTAACTCCAGGGAGCTCACAACACGC-AAGGACCCGGATTTCCCGCTGCCTGAACGCCCAGT-----------------ATTCGCACACTGATAAGAA-CGCCT-CCCCATAACTCCCCTGCCAGCGCCTCCAACACCCCCAATCCTTTCCCC--AGGAACCCAGTCCCG-GTTTC-TGCAGTTCCTCTAACAGCCACGTTCCCACACAAGTGCTGCCTGAGCTCCCCAA-GCCCTCCAGCAATCACCCCCCA--------------------GTGCCTTCGAAGGTCTATTCAGAGAAGTCACCAAGCTGCAGTCACCCAGGAAATTCAAGGACCTCCAACTGACCAAAAGGCTTTCGGCTGGACAGA-GCTAACCTTCCTATTCCCCTCCT-AAACCTACAACCTAGTTTTCATTTCTCAAGAAGCCTTTC-------CCTGTGCTCAC-GCACGCAGTTGTTAGCTGGCTCGGTGAGGCACTCCAAGCAGTAACAGCGGTAGCCACAAAATAAACCTGAAGCATCTCCACCATGAAGCAGTAATAATAATTTGT i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2919957 618 - 123690457 AGATGACTGCCCCTGAGG-GATTACAGAAAAAGCAGCAGTCAGATGTTCAACGAAGTAAAATGTATCCAATGATAGCTCAGGGGAGGGGG-ATCAATTGAGCTGAAATTGGCAAGAACGTAACTCCAGAGAGCTCACAACACGC-AAGGACCCGGATTTTCCGCTGCCTGAACGCCAGGT-----------------ATTCGCACACTGATAAGAA-CACCT-CCCCATAACTCCCCTGCCAGCGCCTCCAACACCCCCAATCCTTTCCCC--AGGAATCCAGTCCCA-GTTTC-TGCAGTTCCTGTAACAGCCACGTTCCCACACAAATGCTGCCTGAGCTCCCCAA-GCCCTCCAACAATCACCCCCCA--------------------GTGCCCTCGAAGGTCTATTCAGAGAAGTCACCAAGATGCAGTCACTGAGGAAATTCAAGGACCTCCAACCTACCAAAAGGCTTTCGGCTGTACAGA-GCTAACCTTCCTATTCCCCTCCC-AAGCCTACAGCCTAGTTTTCATTTCTCAAGAAGCCTTTC-------CCTGTGCTCAC-GCACGCAGTTGTTAGCTGGCTCGGTGAGGCACTCCAAGCAGTAACAGTGGTGGCCACAAAATAAACCAGAAGCATCTCCACCATGAAGCAGTAATGATAATTTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179808133 614 - 180051392 AGATGACTGCCCCTGAGG-GATTACAGAAAAAGCCGCAGTCAGGTGTTCAATGAAGTAAAATGTGTCCAATGATACCGCAGGGGAGGGGG-ATCAATTGAGCTGAAACTGGCAAGAAGGTAACTCCAGGGAGCTCACAACACCC-AAGGACCCGGATTT-CCGCCGCCTGAACGTCCAGT-----------------ATTCGCACACTGATAAGAA-CACCT-CCCCATAATTCCCCTGCCAGCGCCTCCAACACCCCCAATCCTTTCCCC--AGGAATGCAGTCCCC-GTGTT-TGCGGCTCCTGTAACAGCCACGTTCCCACACAAGTGCTGCCTGAGCTCCCCAA-GCCCTCCAACCACCACCCCCCA--------------------ATGCCCTCGAAGGTCTATTCAGAGAAGTCACCAAGATGCAGTCACCGAGGAAATTCAAGGACCTCCAACTTACCAAAAGGCTTCCGGCTGTACAGA-GCTAAGCTTCCTATTCCCCTCCT-AAACCTACAACCTAGTTTTCATTTCACAAGAAGCCTTTC-------CTTGTGCTCAT-GCACGCAGTTGTCAGCCGGCTTGGTGAGGCACTCCA---AATAACAGCGGCAGCCACAACAGAAACCAGAAGCATCTCCACCATGAAGCAGTAATAATACTTTGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1620540 614 + 181584905 AGATGACTGCCCCTGAGG-GATTACAGAAAAAGCCGCAGTCAGGTGTTCAATGAAGTAAAATGTGTCCAATGATACCGCAGGGGAGGGGG-ATCAATTGAGCTGAAACTGGCAAGAAGGTAACTCCAGGGAGCTCACAACACCC-AAGGACCCGGATTT-CCGCCGCCTGAACGTCCAGT-----------------ATTCGCACACTGATAAGAA-CACCT-CCCCATAATTCCCCTGCCAGCGCCTCCAACACCCCCAATCCTTTCCCC--AGGAATGCAGTCCCC-GTGTT-TGCGGCTCCTGTAACAGCCACGTCCCCACACAAGTGCTGCCTGAGCTCCCCAA-GCCCTCCAACCACCACCCCCCA--------------------ATGCCCTCGAAGGTCTATTCAGAGAAGTCACCAAGATGCAGTTACCGAGGAAATTCAAGGACCTCCAACTTACCAAAAGGCTTCCGGCTGTACAGA-GCTAAGCTTCCTATTTCCCTCCT-AAACCTACAACCTAGTTTTCATTTCTCAAGAAGCCTTTC-------CTTGTGCTCAT-GCACGCAGTTGTCAGCCGGCTTGGTGAGGCACTCCA---AATAACAGCGGCAGCCACAACAGAAACCAGAAGCATCTCCACCATGAAGCAGTAATAATACTTTGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 36576 619 + 100774 AGATGACTGCCCCTGAGG-GATTACAGAAAAAGCCGCAGTCAGGTGTTCAATGAAGTAAAATGTGTCCAATGATACCGCAGGGGAGGGGG-ATCAATTGAGCTGAAACTGGCAAGAA-CTAACTGCAGGGAGCTCACAACACCC-AAGGACCCGGATTT-CCGCCGCCTGAAGGTCCAGT-----------------ATTCGCACACTGATAAGAA-CACCT-CCCCATAATTCCCCTGCCAGCGCCTCCAACACCCCCAATCCTTTCCCC--AGGAATGCAGTCCCC-GTGTT-TGCGGCTCCTGTAACAGCCACGTCCCCACACAAGTGCTGCCTGAGCTCCCCAA-GCCCTCCAACCACCACCCCCCA--------------------ATGCCCTCGAAGGTCTATTCAGAGAAGTCACCAAGATGCAGTCACCGAGGAAATTCAAGGACCTCCAACTTACCAAAAGGCTTCCGGCTGTACAGA-GCTAAGCTTCCTATTCCCCTCCT-AAACCTACAACCTAGTTTTCATTTCTCAAGAAGCCTTTCCAGCTTTCTTGTGCTCATGGCACGCAGTTGTCAGCCGGCTTGGTGAGGCACTCC----AATAACAGCGGCAGCCACAACAGAAACCAGAAGCATCTCACCCATGAAGCAGTAATAATA-TTTGT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 555742 610 - 16742782 AGATGACTGCCCCCAAGG-GATTACAGAAAAAGCAGCAGTCAGGTGTTCAATGAAGTAAAACATGACC------TTCCCAGGGGAGGGGGCATCAATTGAGCTGAAACTGGCAAGAAGGTAACTCCAGGGAGCTCACAACACCC-AAGGACCCGGATTTCCCGCCGCCTGAACGCCCAGT-----------------ATTCGCACACTGATAAGAA-CACCT-CCCCGTAATTCCCCTGCCAGCGCCTCCAACACCCCCAATCCTTTCCCC--AGGAATGCAGTCCCC-GTTTC-TGCGGCTCCTGTAACAGCCACGTTCCCACACAAGTGCTGCCTGAGCTCCCCAA-GCCCTCCAACAATCACCCCCCA--------------------ATGCCCTCGAAGGTCTATTCAGAGAAGTCACCAAGATGCAGTCACCGAGGAAATTCAAGGACCTCCAATTTACCAAAAGGCTTCCGGCTGTACAGA-GCTAAGCTTCCTATTCCCCTCCT-AAACCTACAACCTAGTTTTCATTTCTCAAGAAGCCTTTC-------CTTGTGCTCAT-GCACGCAGTTGTTAGCTGACTCGGTGAGGCACTCCA---AAGAACAGCGGCAGCCACAACATAAACCAGAAGCATCTCCACCATGAAGCAGTAATAACACTTTGT i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1476107 609 + 91010382 AGATGACTGCCCCCAAGG-GATTACAGAAAAGGCGGCAGTCAGGTGTTCAATGAAGTAAAACGTGACC------TTCCCAGGGGAGGGGGGATCCATTGAGCTGAAACTGGCAAGAAGGTAACTCCAGGGAGCTCACAACACCC-AAGGACCCGGATTTCCCGCCGCCTGAACGCCCAGT-----------------ATTCGCACACTGATAAGAA-CACCT-CCTCATAATTCCCCTGCCAGCGCCTCTAGCACCCCCAATCCTTTCCCC--AGGAATGCAGTCCCC-GTTTC-TGCGGCTCCTGTAACAGCCACGTTCCCACACAAGTGCTGCCTGAGCTCCCCAA-GCCCTCCAACAATCACCCCGCA--------------------ATGCCCTCGAAGGTCTATTCAGAGAAGTCACCGAGATGCAGTTACCGAGGAAATTCAAGGACCCCCAGCTTACCAAAAGGCTTCCGGCTGTACAGA-GCTAAGCTTCCTATTCCCCTCCT-AAACCTACAACCTAGTTTTCATTTCTCAAGAAGCCTTTC-------CCTGTGCTCAT-GCACGCAGTTGTTAGCCGGCCTGGTGAGACACTCC----AATAACAGCGGCAGCCACAACACAAACCAGAAGCATCTCCACCATGAAGCAGTAATAATACTTTGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 69219 610 - 6207128 AGATGATTGCCCCTGAGG-GATTACAGAAAAAGCTGCAGTCAGGTGTTCAATGAAATAAAACGTGACC------TTCCCAGGGAAGGGGGGATCAATTGAGCTGAAACTGGCAAGAAGGTAACTCCAGGGAGCTCACAACACCC-AAGGACCCGGATTTCCCGCCGCCTGAACGCCCAGT-----------------GTTCGCACACTGATAAGAA-CACCT-CCCCATAATTCCCCTGCCAGCGCCTCCAACACCCCCAATCCTTTCCCC--AGGAATGCAGTCCCC-GTTTC-TGCGGCTCCTGTAACAGCCACGTTCCCACACAAGTGCTGCCTGAGCTCCCCAA-GCCCTCCAACAATCACCCCCCA--------------------ATGCCCTCGAAGGTCTATTCAGAGAAGTCACCAAGATGCAGTTACCGAGGAAATTCAAGGACCTCCAACTTACCAAAAGGCTTCCGGCTGTACAGA-GCTAAGCTTCCTATTTCCCTTCT-AAACCTACAACCTAGTTTTCATTTCTCAAGAAGCCTTTC-------CTTGTGCTCAT-GCACGCAGTTGTTAGCTGACTCGGTGAGGCACTCCA---AAGAACAGCGGCAGCCACAACATAAACCAGAAGCATCTCCACCACGAAGCAGTAATAACACTTTGT i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 472476 616 - 514179 AGATGACTGCCCCTGAGG-GATTACAGAAAAAGCGGCAGTCAGGTGTACAATGAAGTAAAATGTGTCCAATGATACCGCAGGGGAGGGGG-ATCAATTGAGCTGAAACCGGCAAGAA-CTAACTCCAGGGAGCTCACAACACCT-AA-GATCCGGATTTCCCGCTGCCTGAACGCCCAAT-----------------ATTCGCACACTGGTAAGAA-CACCT-CCCCATAATTCCCCTGCCAGCGCCTCCAACACCCCCAATCCTTTCCCC--AGGAATGCAGTCCCC-GTTTC-TGCGGCTCCTGTAACAGCCACATTCCCACACAAGTGCTGCCTGACCTCCCCAA-GCCCCCCAACAATCACCCCCCA--------------------ATGCCCTCGAAGGTCTATTCAGAGAAGTCATCAAGATGCTGTCACCGAGGAAATTCAAGGACCTCCAACTTACCAAAAGGCTTCCCGCTGTACAGA-GCTAAGCTTCCTATTCCCCTCCC-AAACCTACAACCTAGTTTTCATTTCTCAAGAAGCCTTTC-------CTTGTGCTCAC-GCACGCGGTTGTTAGCCGGCTTGGTGAGGCGCTCCAAGCAGTAACAGCGGCAGCCACAACATAAACCAGAAGCATCTCCACCAGGAAGCAGTAATAATACTTTGT i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204133007 606 + 204313951 AGATGACTGCA--TGAGG-GAATACGGGAAC--GGGCAGTCAGGTGTTCAACGAAGTAAAATGTGTCTAAAGGTACTGCAGGGGA-GGGG-ATCAACTGAGCCGAAACTGGCAAGAAGGTAACTCCAGAGAGCCCCCAGT-CGC-AAGGACCCAGATTCC---CTGCCCGAACGCCCAGT-----------------ATTCCCACACTGATAAGAA-CACCTCCCCCATAAATCCCTTGCCTGCACCTCCAACACCCCCAGTCCTTTCCCC--CAGAACCCAGTCCCG-GTATC-TGCAGTTCCTGCAGCAGTCACATTCCCACACAAGTGCTGCTTGAGTTCCTCAA-GCCCTCCAACAATCACCTCCCAGGCCGCCTGGTAACCCTTTAGTGCCCTCGATGGTCTATGCAGAGAAGTCACCAAGGTGCAGTCACCGAGGAAATTCAAGGACCTCCAACTTACCAAAAGGGTTTCTGCTGC--AGA-GCTAATCTTCCTACCCCCCTCCTAAAACCCACACCCTAGTTTTCATTTCTCAAGAAGCCTTTC-------CCTGTGCTCAC-GCACGCAGCTGTTAGCTGGCTCGGTGAGGCACT-----------------------CAAAATAAACCAGAAGCATCTCCACCATGAAGCGGTAATAATAACGTGT i calJac3.chr2 C 0 I 309 s saiBol1.JH378155 16275260 627 + 16417988 AGATGACTGCAGCTGAGG-GATCACAGAAACAGGGGCAGTCAGGTGTTGCATGCAGTAAAATGTGTCTAATGGTACTGCAGGGGAGGGGG-ATCAATTGAGCCGAAACTGGCAAGAAGGTAACTCCAGAGAGCCCCCAGC-TGG-AAGGACCCAGATTCC---CTGCCGGAACGCCCAGTTCCCACACCGATGCCCAGTTCCCACACCGATGAGAA-CACCTCCCCCATAAATCCCTTGCCAGCACGTCCAACACGCCCAGCCCTTTCCCC--AGGAATCCAGTCCCG-GAATC-TGCAGTTCCTGCAGCAGTCACATTCCCACACAAGTACTGCTTGAGTTCCCCAA-GCCCTCCGACAGTCACCTCCCAGGCCACCTGGTAACCGCGCGGTGCCCTCGAGGGTCTATGCAGAGAATTCACCAAGACGCAGTCACCAAGGAAATTCACGGACGTCCGACTTACCAAAAAGGTTT-TGCTGTAGAGA-GCTGATCTTCCT--CCCCCTCCTAAAACCCGCCTCCCAGTTTTCATTTCTCAAGAAGCCTTTC-------CCTGTGCTCAC-GCACGCAGTTATTAGCTGGCTTGGTGAGGCACT-----------------------CAAAATAAACCAGAAGCATCTCCACCATGAAGCAGTAACAATAACGTGT i saiBol1.JH378155 C 0 C 0 a score=416547.000000 s hg38.chr3_KI270934v1_alt 156553 66 + 163458 CCTAATGATTCCTTTGTCCTTGGAAAATCAACTTCAGAAAGAAAGTTATCCACT-GTGAGCAGGG-CA s panTro5.chr3 202077270 66 + 202621043 CCTAACGATTCCTTTGTCCTTGGAAAATCAACTTCAGAAAGAAAGTTATCCACT-GTGAGCAGGG-CA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204942016 66 + 205426864 CCTAATGATTCCTTTGTCCTTGGAAAATCAACTTCAGAAAGAAAGTTATCCACT-GTGAGCAGGG-CA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 797754 67 + 837792 CCTAATGATTCCTTTGTCCTTGGAAAATCAACTTCAGGAAGAAAGTTATCCACTAGTGAGCAGGG-CA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2920575 66 - 123690457 CTTAATGATTCCTTTGTCCTTGGAAAATCAACTTCAGAAAGAAAGTTACCCACT-GTGAGCAGGG-CA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179808747 66 - 180051392 CCTAATGATCCCTTTGTCCTTGGAAAATGAACTTCAGAAAGAAAGTTATCCACT-GCGAGCAGAG-CA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1621154 66 + 181584905 CCTAATGATCCCTTTGTCCTTGGAAAATGAACTTCAGAAAGAAAGTTATCCACT-GCGAGCAGAG-CA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 37195 67 + 100774 CCTAATGATCCCTTTGTCCTTGGAGAATGAACTTCGAGAAGAAAGTTATCCACT-GCGAGCAGAGCCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 556352 66 - 16742782 CCTAATGATCCCTTTGTCCTTGGAACATGAACTTCAGAAAGAAAGTTATCCACT-GCGAGCAGAG-CA i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1476716 66 + 91010382 CCTAATGATCCCTTTGTCCTTGGAAAATGAACTTCAGAAAGAAAGTTATCCACT-GTGAGCAGAG-CA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 69829 66 - 6207128 CCTAATGATCCCTTTGTCCTTGGAACATGAACTTCAGAAAGAAAGTTACCCACT-GCGAGCAGAG-CA i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 473092 66 - 514179 CCTAATGATCCCTTTGTCCTTGGAAAATGAACTTCAGAAAGAAAGTTATCCACT-GCAAGCAGAG-CA i colAng1.NW_012118799v1 C 0 I 211 s calJac3.chr2 204133922 48 + 204313951 CCTGATGGCTTTTTTGTCCTTGGAAAATCAACTCCA-------------------GCGAGCACAG-CA i calJac3.chr2 I 309 C 0 s saiBol1.JH378155 16275887 48 + 16417988 CCTAATGGCTTTTCTGTCCTTGGAAAATCAACCCCA-------------------GAGAGCACAG-CG i saiBol1.JH378155 C 0 C 0 a score=31396.000000 s hg38.chr3_KI270934v1_alt 156619 5 + 163458 GGCTC s panTro5.chr3 202077336 5 + 202621043 GGCTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204942082 5 + 205426864 GGCTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 797821 5 + 837792 GACTC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2920641 5 - 123690457 GGCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179808813 5 - 180051392 GGCTT i rheMac8.chr6 C 0 I 34 s macFas5.chr6 1621220 5 + 181584905 GGCTT i macFas5.chr6 C 0 I 34 s macNem1.NW_012013899v1 37262 5 + 100774 GGCTT i macNem1.NW_012013899v1 C 0 I 35 s cerAty1.NW_012009470v1 556418 5 - 16742782 GGCTC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1476782 5 + 91010382 GGCTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 69895 5 - 6207128 GGCTT i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr2 204133970 5 + 204313951 GGCTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16275935 5 + 16417988 GGCTC i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 473158 211 - 514179 I a score=3593545.000000 s hg38.chr3_KI270934v1_alt 156624 564 + 163458 GCGGCTTCTTGGTCCGGAGACCCAGGTCCCACTGG-C-----------------------------------------CCACTCA-CCCTTGGAGAGAGCTTGCTGAAGCTGGGTGTCCGATATCACTCCACTCC--TCTCTATCAACCCTATAACATCAAGAAGACCAAACAAGCTGGCGATCGAAAGTTCAGGAAAAGCAAAACAAACGTCTCCTGTCAACCCTGCACCGACTCTGGAAGGCTC----CCTCCTGGAACCTCCGCCTCTCCGGTCCCGC--------TGAGGAGTACAGCGGAATCAAGGAAGTGCCCCAGGAGCC--ACGTCCAAGTGTGTTCTTCCCCTAAGAGGACAATCATCTTTCTCTCTCTTTTCCCACCTCAATCCTTCCCTTCCTTCCCCTCCTGACCTGTCTGAATTC-CCATTTGCACCAGTTTCCCTTTT-TCACAG-ACAAGACAAGATTCCC--TCAGATAACTAAGCCATTCCCTGGCCATGAGTTACTACAGTTTCGGTCATTCA-TTCAGTGGAAAAGCGACCAGGGACA--GAAGGCGCCGCCATAAAGGTCACCTGGCCCGAGCAGACGCCAGGTCGCTGCTTCTTCCTTGGCTGCTGACA s panTro5.chr3 202077341 556 + 202621043 GCGGCTTCTTGGTCCCGAGGCCCAGGTCCCACTGG-C-----------------------------------------CCACTCA-CCCTTGGAGACAGCTTGCTGAAGCTGGGTGTCCGATATCACTCCACTCC--TCTCTATCAACCCTATAACATCAAGAAGACCAAACAAGCTGGCGATCGAAAGTTCAGGAAAAGCAAAACAAACGTCTCCTGTCAACCCTGCACCGACTCTGGAAGGCTC----CCTCCTGGAACCTCCGCCTCTCCCGTCCCGC--------T---GAGTACAGGGGAATCGAGGAAGTGCCCCAGGAGCCG-ACGTCC-AGTGTGGTCTTCCCCTAAGAGGACAATCATCTTTCTCTCTCTTTTCCCACCTCAAtcctt-ccttcctt-ccctcctg-cctGTCTGAATT--TCATTTGCACCAGTTTCCTTTTCATCACAG-ACAAGACAAGATTCCC--TCAGATAACTAAGCCATTCCCTGGCCATGAGTTACTACAGTTTCGGTCATTCA-TTCAGTGGAAAAGCGACCA-GGACA--AAAGGCGCCGCCAT-AAGGTCACCTGGCCCGAGCAGACGCCAGGTCGCTGCTTCTTCCTTGGCTGCTGACA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204942087 564 + 205426864 GCGGCTTCTTGGTCCCGAGGCCCAGGTCCCACTGG-C-----------------------------------------CCACTCA-CCCTTGGAGAGAGCTTGCTGAAGCTGGGTGTCCGATATCACTCCACTCC--TCTCTATCAACCCTATAACATCAAGAAGACCAAATAAGCTGGCGATCGAAAGTTCAGGAAAAGCAAAACAAACGTCTCCTGTCAACCCTGCACCGACTCTGGAAGGCTC----CCTCCTGGAACCTCCGCCTCTCCCGTCCCGC--------TGAGGAGTACAGGGGAATCGAGGAAGTGCCCCAGGAGCCG-ACGTCC-AGTGTGGTCTTCCCCTAAGAGGACAATCATCTTTCTCTCTCTTTTCCCACCTCAATCCTTCCCTTCCTTCCCCTCCTGGCCTGTCTGAATTC-GCATTTGCACCAGCTTCCCTTTT-TCACAG-ACAAGACAAGATTCCC--TCAGATAACTAAGCCATTCCCTGGCCATGAGTTACTACAGTTTCGGTCATTCA-TTCAGTGGAAAAGCGACCAGGGACA--AAAGGCGCCGCCATAAAGGTCACCTGGCCCGAGCAGACGCCAGGTCGCTGCTTCTTCCTTGGCTGCTGACA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 797826 566 + 837792 GCGGCTTCTTGGTCC-GAGGCCCAGGTCCCACTGG-C-----------------------------------------CCACTCA-CCGTTGGAGACAGCTTGCTGAAGCTCGGCGTCCGATATCACTCCACTCCTGTCTTTATCAACCCTACAACATCAAGAAGACCAAATAAGCTGGCGATCGAAAGTTCAGGAAAAGCAGAACAAACGTCTCCTGTCAACCCTGCACCGACTCTGGAAGGCTC----CCTCCTGGAACCTCCGCCTCTCCCGTCCCGC--------TGAGGAGTACAGGGGAATCGAGGAAGTGTCCCAGGAGCC--ACGTCCAAGTGTGGTCTTCCCCTAAGAGGCCAATCATCTTTCCCTCTCTTTTCCCACCTCAATCCTTCCCTTCCTTCCCCTCCTGGCCTGTCTGAATTCGCCATTTGCACCAGCTTCCCTTTC-TCACAA-ACAAGAAAAGATTCCC--TCAGATAACTAAGCCATTCCCTGGCCATGAGTTACTACAGTTTCGGCCATTCA-TTCAGTGGAAAAGCGACCAGGGACA--GAAGGCGCCGCCATAAAGGTCACTTGGCCCGACCAGACTCCAGGTCGCTGCTTCTTCCTTGGCTGCTGCCA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2920646 559 - 123690457 GCGGCTTCTCGGTCTGGAGGCCCAGGTCCCATTGG-C-----------------------------------------CCACTCA-CGGTTGGAGACAGCTTGCT-AAGCTCGGTGTCC-ATATCACTCCACTGCTGTCTTTATCAACCCTACAACATC---AAGACCAAATAAGCTGGCGATCGAAAGTTCAGGAAAAGCAAAACAAACGTCTCCTGTCAACCCTGCACCGACTCTGGAAGGCTC----CCTCCTGGAACCTCCGCCTCTCCCATCCCGC--------TGAGGAGTGCAGGGGAATCAAGGAAGTGCCCCAGGAGCCG-ACGTCCAAGTGTGGTCTTCCCCTAAGAGGTCAATCATCTTT--CTCTCTTTTCCCACCTCAATCCTTCCCTTCCTTCCCCTCCTGGCCTGTCTGAATTC-GCATTTGTACCAGTTTCCCTTTT-TCACAA-ACAAGAAAAGATTCCC--TCAGATAA-TAAGCCATTCCCTGGCCATGAGTTACTACAGTTTCGGTCATTCA-TTCAGTGGAAAAGCGACCAGGGACA--GAAGGCACCCCCATAAAGGTCACTTGGCCCAACCAGACGCCAGGTCGCTGCTTCTTCCTTGGCTGCTGACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179808852 592 - 180051392 GCGGCTTCTGGGTCCGGA--CCCAGGTCCCACGGG-CCCACTCAGCGGCTTCTGGGTCCGGACCCAGGACCCACGGGCCCACTCA-CCGTTGGAGAGAGCTTGCTGAAGCTCGGTGTCCGATATCACTCCACTCCTGTCTTTATCAACCCTACAACATCAAGAAGACCAAGTAAGCTGGCGATCCAAAGTTCAGGAAAAGCAAAACAAACGTCTCCTGTCAACCCTGCACTGACTCTGGAAGGCTCGGAGCCTCCTGGAACCTCCGCCTCCCCCATCCCGC--------TGAGGAGGACACGGGAATCAAGGAAGTGCCGCAGGAGCCC-ACGTCCAAGCGGGGTCTTCCCCTAAGAGGCCAATCATCTTTCTCT------------CTCAATCCTTCCCTTCCTTCCTCTCCTGGCCTGTCTGAATTC-ACATTTGCACCAGTTTCCCTTTT-TCACAC-AC-----AAGATTCCC--TCAGATAACTAAGGCATTCCCTGGCCATGAGTCACTACAGTTTCGGTCATTCA-TTCCGTGGAAAAGCGA-CCGGGACA--GAAGGCGCCGCCGGAAAGGTCACCTGCCCCGAGCAGACGCCAGGTCGCTGCTGCTTCCTCGGCTGCTGACA i rheMac8.chr6 I 34 C 0 s macFas5.chr6 1621259 592 + 181584905 GCGGCTTCTGGGTCCGGA--CCCAGGTCCCACGGG-CCCACTCAGCGGCTTCTGGGTCCGGACCCAGGTCCCACGGGCCCACTCA-CCGTTGGAGAGAGCTTGCTGAAGCTCGGTGTCCGATATCACTCCACTCCTGTCTTTATCAACCCTACAACATCAAGAAGACCAAGTAAGCTGGCGATCCAAAGTTCAGGAAAAGCAAAACAAACGTCTCCTGTCAACCCTGCACTGACTCTGGAAGGCTCGGAGCCTCCTGGAACCTCCGCCTCTCCCATCCCGC--------TGAGGAGGACACGGGAATCAAGGAAGTGCCGCAGGAGCCC-ACGTCCAAGCGGGGTCTTCCCCTAAGAGGCCAATCATCTTTCTCT------------CTCAATCCTTCCCTTCCTTCCTCTCCTGGCCTGTCTGAATTC-ACATTTGCACCAGTTTCCCTTTT-TCACAA-AC-----AAGATTCCC--TCAGGTAACTAAGGCATTCCCTGGCCATGAGTCACTACAGTTTCGGTCATTCA-TTCCGTGGAAAAGCGA-CCGGGACA--GAAGGCGCCGCCGGAAAGGTCACCTGCCCCGAGCAGACGCCAGGTCGCTGCTGCTTCCTCGGCTGCTGACA i macFas5.chr6 I 34 C 0 s macNem1.NW_012013899v1 37302 580 + 100774 GCGGCTTCTGGGTCC-GA--CCCA-GTCCCACGGGCCCCACTCAGCGGCTTCTGGGTCGGACCCCAGGT---------CCACTCACCCGTTGGAGAGAGCTTGCTGAAGATCGGTGTCCGATATCACTCCACTCCTGTCTTTATCAACCCTACAACATCAAGAAGACCAAGTAAGCTGGCGATCCAAAGTTCAGGAAAAGCAAAACAAACGTCTCCTGTCAACCCTGCACCGACTCTGGAAGG-TCGGAGCCTCCTGGAACCTCCGCCTCTCCCATCCCGC--------TGAGGAGGA-ACGGGAATCAAGGAAGTGCCGCAGGAGCCCAACGTCCAAGCGGGGTCTTCCCCCAAGA-GCCAAACATCTTTCTCT------------CTCAATCCTT-CCTTCCTTCCTCTCCTGGCCTGTCTGAATTC-ACATTTG-ACCAGTT--CCCTTT-TCACAGCAC-----AAGATTCCCATCCAGATAACTAAGGCATTCCCTGGCCATGAGTCACTACAGTTTCGGTCATTCATTTCCGTGGAAAAGCGA-CCGGGACAAGAAGAGCGCCGCCGGAAAGGTCACCTG-CCCGAGCAGACGCCAGGT--CCGCTGCTTCCTCGGCTGCTGACA i macNem1.NW_012013899v1 I 35 C 0 s cerAty1.NW_012009470v1 556423 552 - 16742782 GCGGCTTCTCGGTCCGGA--CCCAGGTCCCACTGG-C-----------------------------------------CCACTCA-CCGTTGGAGAGAGCTTGCTGAAGCTCGGTGTCCGAGATCACTCCACTCCTGTCTTTATCAACCCTACAACATCAAGAAGACCAAATAAGCTGGCGATCCAAAGTTCAGGAAAAGCAAAACAAACGTCTCCTGTCAACCCTGCACCGACTCTGGAAGGCTCGGAGCCTCCTGGAACCTCCGCCTCTCCCATCCCGC--------TGAGGAGGACACGGGAATCAAGGAAGTGCCCCAGGAGCCC-ACGTCCAAGCGGGGTCTTCCCCTAAGAGGCCCATCATCTTTCCCT------------CTCAATCCTTCCCTTCCTTCCTCTCCTGGCCTGTCTGAATTC-ACATTTGCACCAGTTTCCCTTTT-TCACAA-AC-----AAGATTCCC--TCAGATAACTAAGGCATTCCCTGGCCAGGAGTCACTACAGTTTCGGTCATTCA-TTCCGTGGAAAAGCGACCCGGGACA--GAAGGCGCCGCCGGAAAGGTCACCTGCCCCGAGCAGACGCCAGGTCGCTGCTGCTTCCTTGGCTGCTGACA i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1476787 547 + 91010382 -------CTGGATCCGGA--CCCAGGTCCCACTGG-C-----------------------------------------CCACTCA-CCGTTGGAGAGAGCTTGCTGAAGCTCGGTGTCCGATATCACTCCACTCCTGTCTTTATCAACCCTACAACATCAAGAAGACCAAATAAGCTGGCGATCCAAAGTTCAGGAAAAGCAAAACAAACGTCTCCTGTCAACCCTGCACCGACTCTGGAAGGCTCGGAGCCTCCGGGAACCCCCGCCTCTCCCATCCCGC--------TGAGGAGGACACGGGAATCAAGGAAGTGCCCCCGGAGCCC-ACGTCCAAGCGGGGTCTTCCCCTAAGAGGCCAATCATCTT--TCT------------CTCAATCCTTCCCTTCCTTCCTCTCCTGGCCTGTCTGAATTC-ACATTTGCACCAGTTTCCCTTTT-TCACAA-ACAAGAAAAGATTCCT--TCAGATAACTAAGGCATTCCCTGGCCATGAGTCACTACAGTTTCGGTCATTCA-TTCCGTGGAAAAGCGACCCGGGACA--GAAGGCGCCG-CGTAAAGGTCACCTGCCCCGAGCAGACGCCAGGTCGCTGCTGCTTCCTCGGCTGCTGACA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 69900 545 - 6207128 -------CTGGGTCCCGA--CCCAGGTCCCACTGG-C-----------------------------------------CCACTCA-CCGTTGGAGAGAGCTTGCTGAAGCTCGGTGTCCGAGATCACTCCACTCCTGTCTTTATCAACCCTACAACATCAAGAAGACCAAATAAGCTGGCGAGCCAAAGTTCAGGAAAAGCAAAACAAGCGTCTCCTGTCAACCCTGCACCGACTCTGGAAGGCTCGGAGCCTCCTGGAACCTCCGCCTCTCCCATCCCGC--------TGAGGAGGACACGCGAATCAAGGAAGTGCCGCAGGAGCCC-ACGTCCAAGCGGGGTCTTCCCCTAAGAGGCCAATCATCTTTCTCT------------CTCAATCCTTCCCTTCCTTCCTCTCCTGGCCTGTCTGAATTC-ACATTTGCACCAGTTTCCCTTTT-TCACAA-AC-----AAGATTCCC--TCAGATAACTAAGGCATTCCCTGGCCATGAGTCACTACAGTTTCGGTCATTCA-TTCCGTGGAAAAGCGACCCGGGACA--GAAGGCGCCGCCGGAAAGGTCACCTGCCCCGAGCAGACGCCAGGTCGCTGCTGCTTCCTCGGCTGCTGACA i manLeu1.NW_012109696v1 C 0 M 975 s colAng1.NW_012118799v1 473369 552 - 514179 GCGGCTTCTCGGTCCGGA--CCCAGGTCCCACTGG-C-----------------------------------------CCACTCA-CCGTTGGAGAGAGCTTGCTGAAGCTCGGTGTCCGATATCACTCCACTCCTGTCTTTATCAACCCTACAACATCAAGAAGACCAAATAAGCTGGCGATCCAAAGTTCAGGAAAAGCAAAACAAACGTCTCCTGTCAACCCTGCACCGACTCTGGAAGGATCGGAGCCTCCTGGAACCTCCGCCTCTCCCATCCCAC--------CGAGGAGGGCAGGGGAATCAAGGAAGTGCCCCAGGAGCCC-ACGTCCAAGCGTGGTCTTCCCCTAAGAGGCCAATCATCTTTCTCT------------CTCAATCCTTCCCTTCCTTCTTCTCCTAGCCTGTCTGAATTC-ACATTTGCACCAGTTTCCCTTTT-TCACAA-AC-----AAGATTCCC--TCAGATAACTAAGGCATTCCCTGGCCACGAGTCATTACAGTTTCGGTCATTCA-TTCAGTGGAAAAGCGACCCGGGACA--GAAGGCGCCGCCGTAAAGGTCACCTGCCCCGAGCAGACGCCAGGTCGCTGCTGCTTCCTTGGCTGCTGACA i colAng1.NW_012118799v1 I 211 C 0 s calJac3.chr2 204133975 530 + 204313951 GAGGCTTCTAGGTTCGCAGGCCCAGGCCCCACTGG-C-----------------------------------------CCACTCA-CCGTTGGAGAGTGCTTGCTGAAGCTCGCTGTCCGATATCACTCCACTTCTGTCTTTATCAACCCTATGACATCAAAAAGACCAAATGAGCTGACGATCCAAAGCGCAGAAAAAGCAAAACGAACGTCTCCTGTCAGCCCTGCACTGAGTCTGGAAGGCTC----CGTCCTGGAACCTCCGCCTCTTCCATCCTGC-------GGGAGGAGAAC-CGGGGATAAAGGAAGTGCCCCAGGGGCCG-AAGCGCAAGCGTGGTCTTCCCCTAAGAGAT--------------------------CCTCGGTCCTTCGCTTCCTTCCTCTCCTGGCATATCTGAATTC-ACACCTCCACCACTTTCCCTATT-TCATAG-ACAAA--AAAATTC----TCAGACAACTGAGCCATTCCCTGGCCATGAGTCACT--AGTTTCGGTCA-----ATCAGTGGAAAAGAGACCAGGGACA--GA-GTCGCCGTCGTAAAGGTCACCTGCCCCAAGCAGACGCCAGATCTCAGCTTCTTCCTCGGCTGCCGGCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16275940 560 + 16417988 GCGGCTTCTGGGTCCGGAGGCCGAG----CACTGG-C-----------------------------------------CCACTCA-CCATTGGAGAGTGCTTGCTGAAGCTCGCTGTCCGATATCACTCCACTTCTGTCTTTATCAACCCTACGACATCAAAAAGACCAAATAAGCTGGCGATCCAAACTGCAGAAAGAGCAAAACGAACGTCTCCTGTCAGCCCTGCGCGGAGATCTGAAGGCTC----CCTCCTGGAACCCCCGCCTCTCCCATCCTGCTGAGGATGGGATCAGTAC-GGGGGATGAAGGACGGG-CCCGGGAGCCG-CAGTGCAAGCGTGGTCTCCCGCTAAGAGGCC-GTCATCTCT-TCT--CTTTCCGCACCTCAGTCCTTCCCCTCCTTCCTCTCCCGGCCTATTTGAATTC-ACGCCTCCACCACTTTCCCTATT-TCACAC-ACAAA--AAAATTC----TCAGACAACTGAGCCATTCCCTGACCATGAGTCACTACAGTTTCGATCATTCC-ATCAGCGGAAAAGAGGCCAGGGACA--GA-GTCGCCGTCGTAAAGGTCACCTGCCCCGAGCAGACGCCAGATCGCAGCTTCTTCCGTGGCTGCCGGCA i saiBol1.JH378155 C 0 C 0 a score=931066.000000 s hg38.chr3_KI270934v1_alt 157188 174 + 163458 TTTT-AACAGCGGCCCAGACAGTCTGTTTCCGCTTTCCCCAAACAAGCACCC-TGGAGACCCTCCCCC-GACGGCTC--GAGGCGAGAAACGGGGCCTGGCCCAGGAGCCGGTGGCCG-CGACCTC-GGGTCTGCAGTGGC-GCCCTCTGCACCTTGGGAAGCGCCCGACGCACAGGACAGG s panTro5.chr3 202077897 174 + 202621043 TTTT-AACAGCGGCCCAGACAGTCTGTTTCCGCTTTCCCCAAACAAGCACCC-TGGAGACCCTCCCTT-GACGGCTCTTGAGGCGAGAAAAAGGGCCTGGCCCAGGAGCCGGT-GCCG-CGACCTC-GGGTCTGCAGTGGC-GCCCTCTGCACCTT-GGAAGGGCCCGACGCACAGGACAGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204942651 174 + 205426864 TTTT-AACAGCGGCCCAGACAGTCTGTTTCCGCTTTCCCCAAACAAGCACCC-TGGAGACCCTCCCCC-GACGGCTC--GAGGAGAGAAAAAGGGCCTGGCCCAGGAGCCGGTGGCCG-CGACCTC-GGGTCTGCAGTGGC-GCCCTCTGCACCTTGGGAAGGGCCCGACGCacaggacagg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 798392 174 + 837792 TTTT-AACAGCGGCCCAGACAGTCTATTTCCGCTTTCCCCAAACAAGCGCCC-TGGAGACGCTCCCCCTGACGCCTG--GAGGCGAGAAACAGGGCCTGGCCTAGG-GCCGGTGGCCG-CGACCTC-GGGTCTGCAGTGGC-GCAGTCTGCACCTTGGGAAGGGCCCGACGCACAGGACAGG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2921205 178 - 123690457 TTTT-AACAGCGGCCCAGGCGGTCTGTTTCCGCTTTCCCCAAACAAGCACCC-TGGAGACCCTCCCCCTGGCGGCTCCTGAGGCGAGAAAAAGGGCCTAGCCCAGGAGCCGGTGGCCA-CGACATC-GGGTCTGCAGTGGCTGCACTCTGCACCTTAGGAAGGGCCTGACGCACAGGACAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179809444 175 - 180051392 -CTT-AACAGC-GCCCAGACATTCTGTCTCTGCTTTCCCCGAACAAGCACCCCTGGAGACCCTCCGCCCGGCGGCTCCTGAGGCGAGAAAAAGGGCCTAGCCCGGGAGCCGGTGGCCG-CGACCTC-GGGTCTGCAGCGGC--TACTCTGCACCTCTGGAAGGGCCCAACGCACAgggcagg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1621851 175 + 181584905 -CTT-AACAGC-GCCCAGACATTCTGTCTCTGCTTTCCCCGAACAAGCACCCCTGGAGACCCTCCGCCCGGCGGCTCCTGAGGCGAGAAAAAGGGCCTAGCCCGGGAGCCGGTGGCCG-CGACCTC-GGGTCTGCAGCGGC--TACTCTGCACCTCTGGAAGGGCCCAACGCACAGGGCAGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 37882 172 + 100774 -CTTAAACAGC-GCCCAGACAT--TGTCTCTGCTTTCCCCGAACAA-CACCCTAGGAGACCCTCCGCCCGGCGGCTCCTGAGGCGAGAAAAAGG--CTAGCCCGGGA-CCGGTGGCCGCCGACCTCGGGGTCTGCAGCGGC--TACTCTGCACCTCTGGAAGGGCCCAACGCACAGGGCAGG i macNem1.NW_012013899v1 C 0 I 3482 s cerAty1.NW_012009470v1 556975 175 - 16742782 -CTT-AACAGC-GCCCAGACAGTCTGTCTCTGCTTTCCCCGAACAAGCACCCCCGGAGACCCTCCGCCCGGCGGCTCCTGAGGCGAGAAAAAGGGCCTAGCCCGGGAGCCGGTGGCCG-CGACCTC-GGGTCTGCAGCGGC--TTCTCTGCACCTCTGGAAGGGCCCAACGCACAGGGCAAG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1477334 175 + 91010382 -CTT-AACAGC-GCCCAGGCAGTCCGTTTCCGCTTTCCCCGAACAAGCACCCCTGGAGACCCTCCACCCGGCGGCTCCTGAGGCGAGAAAAAGGGCCTAGCCCAGGAGCCGGTGGCCG-CGACCTC-GGGTCTGCAGCGGC--TACTCTGCACCTCTGGAAGGGCCCAACGCACAGGACAGG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012118799v1 473921 177 - 514179 -CTTCAACAGC-GCCCAGGCAGTCTGTTTCCGCTTTCCCCGAACACGCACCCCTGCAGACCCTCCACCTGGCGGCTCTTGAGGCGAGAAAAAGGGCCTAGCCCAGGAGCCGGTGGCCG-CGACCTC-GGGTCTGCAGCGGC-GCACTCTGCACCTCTGGAAGGGCCCAACGCACAGCACAGG i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204134505 177 + 204313951 TTTT-AACAGC-GCCCAGGCAGTCTGCTTCTGCTTTCCCCAAACAGGCACCCCCGGAGACCCTCGACCTGGCTGCTCTCGGGGCGAGAAAACGGGCCTAGCCCAGAAGCCTGGGGCCG-CGACCTC-GGGGCTGCAGTGGC-AGACTCTGCACCTCGATAAGGGCCCGAGGCACGGGCCAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16276500 176 + 16417988 TTTT-AACAGC-GCCCAGGCAGTCTGCTTCTGCTTTCCCCAACCCAGCACCCCCGGGGACCCTCCACCTGGCGGCTCTCGGGGCGAGAAAAAGGGCCTAGCCCAGAAGCCTGGGGCCG-CCACCTC-GGGGCTGCAGTGGT-GGACTGTGCACCT-GGGAAGGACCCGAGGCACGAGCCAGG i saiBol1.JH378155 C 0 C 0 e manLeu1.NW_012109696v1 70445 975 - 6207128 M a score=189438.000000 s hg38.chr3_KI270934v1_alt 157362 55 + 163458 GACCGGGCAGGAGGCAGGGGCGGCCCCAGGAGACCGGGCAGCGGACGGGGGAGAC s panTro5.chr3 202078071 51 + 202621043 GACC-GGCA--AGGCAGGGGCGGCCACAGGAGACCGGGCAG-GGACGGGGGAGAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204942825 55 + 205426864 gaccgggcagaaggcaggggcggccacaggagaccgggcagcggacggggGAGAC i panPan2.chr3 C 0 N 0 s gorGor5.CYUI01015777v1 798566 55 + 837792 GACCCGGCAGGAGGCAGGGGCGGCCACAGGAGACCGGGCAGGGGACGGGGGAGAC i gorGor5.CYUI01015777v1 C 0 I 2 s nomLeu3.chr11 2921383 55 - 123690457 GACCGGGCAGGAGGCAGGGGCAGCCACAGGAGACCGGGCAGGGGACGGGGGAGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179809619 43 - 180051392 gaccgggcaggaggcgggggcgg-----------c-cataggggacgggggagac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1622026 43 + 181584905 GACCGGGCAGGAGGCGGGGGCGG-----------C-CACAGGGGACGGGGGAGAC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 557150 54 - 16742782 GACGGGGCAGGGGGCGGGGGCGGCCGCGGGAGACC-CACAGGGGACGGGGGCGAC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1477509 54 + 91010382 GACCGGGCAGGAGGCGGGGGCGGCCACAGGGGGCC-CACAGGGGGCGGGGGAGAC i chlSab2.chr4 C 0 C 0 s colAng1.NW_012118799v1 474098 54 - 514179 GACCGGGCAGGAGGCGGGGGCGGCCACAGCAGACC-CACAGGGCACGGGGGAGAC i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204134682 39 + 204313951 GACCgggcaggaggcgggggcggccacgagggtcgccgc---------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16276676 55 + 16417988 GACCGGACAggaggcgggggcggccgcgggggtcggggcaagggacgggggagga i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 38054 3482 + 100774 I e manLeu1.NW_012109696v1 70445 975 - 6207128 M a score=27073.000000 s hg38.chr3_KI270934v1_alt 157417 8 + 163458 CGCGGGGG s panTro5.chr3 202078122 8 + 202621043 CGCGGGGA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 798623 8 + 837792 CGGGGGGG i gorGor5.CYUI01015777v1 I 2 C 0 s nomLeu3.chr11 2921438 8 - 123690457 TGCGAGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179809662 8 - 180051392 cgcagggg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1622069 8 + 181584905 CGCAGGGG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 557204 8 - 16742782 CGCAGGGG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1477563 8 + 91010382 CGCAGGGG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012118799v1 474152 8 - 514179 CGCGGGGG i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 16276731 8 + 16417988 cgcagggg i saiBol1.JH378155 C 0 M 1514 e macNem1.NW_012013899v1 38054 3482 + 100774 I e calJac3.chr2 204134721 0 + 204313951 C e manLeu1.NW_012109696v1 70445 975 - 6207128 M a score=50667.000000 s hg38.chr3_KI270934v1_alt 157425 19 + 163458 ACCCGGAAGGGGATGGGGG s panTro5.chr3 202078130 17 + 202621043 --CCGGAAGGGGATGGGGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 798631 19 + 837792 ACCCGGCAGGGGATGGGGG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2921446 19 - 123690457 ACCTGGCAGGGGATGGGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179809670 19 - 180051392 accgggcaggggacggggg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1622077 19 + 181584905 ACCGGGCAGGGGACGGGAG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 557212 18 - 16742782 ACC-CACAGGGGACGGGGG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1477571 19 + 91010382 ACCCGGCAGGGGACGGGCG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012118799v1 474160 19 - 514179 ACCCGGCAGGGGACGGGGG i colAng1.NW_012118799v1 C 0 M 1850 s calJac3.chr2 204134721 12 + 204313951 -------aggagacggggt i calJac3.chr2 C 0 C 0 e macNem1.NW_012013899v1 38054 3482 + 100774 I e saiBol1.JH378155 16276739 1514 + 16417988 M e manLeu1.NW_012109696v1 70445 975 - 6207128 M a score=35393.000000 s hg38.chr3_KI270934v1_alt 157444 48 + 163458 CGGCCGCGGGGGTCG----------------------------GGGCAGGGGATGGGGGCGGCCGCGTCGGTCGGG s panTro5.chr3 202078147 73 + 202621043 CGGCCGCGGCGGTCGGGAAGGGGTCGGGGCGGCTGCGGGGT-CGGGCAGGGGAT-GGGGCGGCCGCGTCGG-CGGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 798650 75 + 837792 CGGCC-CGGCGTCGGGGTAGGGGTCGGGGCGGCCGCGGGGTCCGGGCAGGGGACGGGGGAGGCCGCTGGGGACCCG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2921465 26 - 123690457 CGGCCGCGGGGGTCG----------------------------GGGCAGGGGTC---------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179809689 48 - 180051392 cggccgcgtcggtcg----------------------------gggccggggacgggggcggccgcgggggtcggg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1622096 47 + 181584905 CGGCCGCGTCGGTCG----------------------------GGG-CAGGGACGGGGGCGGCCGCGGGGGTCGGG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 557230 48 - 16742782 AGACCGCAAGGGACC----------------------------GGGCAGGGGACGGGGGCGGCCGCGGGGGTCGGG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1477590 21 + 91010382 CGGCCGCGTCCGTC-------------------------------------------------------GGTCGGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204134733 48 + 204313951 tggccacggaagtca----------------------------gggcaggggacgggggcggacgcgagggtcggg i calJac3.chr2 C 0 C 0 e macNem1.NW_012013899v1 38054 3482 + 100774 I e saiBol1.JH378155 16276739 1514 + 16417988 M e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 70445 975 - 6207128 M a score=2100.000000 s hg38.chr3_KI270934v1_alt 157492 1 + 163458 G s panTro5.chr3 202078220 1 + 202621043 G i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 798725 1 + 837792 G i gorGor5.CYUI01015777v1 C 0 C 0 s rheMac8.chr6 179809737 1 - 180051392 g i rheMac8.chr6 C 0 I 5541 s cerAty1.NW_012009470v1 557278 1 - 16742782 G i cerAty1.NW_012009470v1 C 0 I 11 s chlSab2.chr4 1477611 1 + 91010382 G i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204134781 1 + 204313951 g i calJac3.chr2 C 0 C 0 e macNem1.NW_012013899v1 38054 3482 + 100774 I e saiBol1.JH378155 16276739 1514 + 16417988 M e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 70445 975 - 6207128 M e macFas5.chr6 1622143 0 + 181584905 C e nomLeu3.chr11 2921491 0 - 123690457 C a score=8689.000000 s hg38.chr3_KI270934v1_alt 157493 16 + 163458 TAGGGTTCGGGGGCGC s panTro5.chr3 202078221 14 + 202621043 -AGGGAT-GGGGGCGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 798726 16 + 837792 CAGGGGTCGGGGTCGG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2921491 8 - 123690457 --------GGGGGCGG i nomLeu3.chr11 C 0 C 0 s chlSab2.chr4 1477612 16 + 91010382 CAGGGGTCGGGGGCGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204134782 16 + 204313951 caagggacggaggagg i calJac3.chr2 C 0 C 0 e macNem1.NW_012013899v1 38054 3482 + 100774 I e saiBol1.JH378155 16276739 1514 + 16417988 M e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 70445 975 - 6207128 M e cerAty1.NW_012009470v1 557279 11 - 16742782 I e macFas5.chr6 1622143 0 + 181584905 C e rheMac8.chr6 179809738 5541 - 180051392 I a score=112975.000000 s hg38.chr3_KI270934v1_alt 157509 96 + 163458 CCGCG-------------------------GGGGTCCGGGCAGGGG-CGGGGGAGACGGCGGAGGTCGGGGCAGGGGACGGGGGAGGCCGCTGGGGACCCGGCAGGTGACGGGGGAGGCCGC s panTro5.chr3 202078235 112 + 202621043 CCGCGCGGTCGGGAGGGGTGGGGCGGCCGCGGGGTCGGGGCAGGGT-CGGG---GAGCGCGGCGGTC-GGGCA-GGGACGGGGGAGGCC---GGGGACATGGCAGGGAAC-GGGGAGGCGGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 798742 97 + 837792 CCGCG-------------------------TGGGTCGGGGCAGGGGTCGGGGGAGGCGGCGGAGGTCGGGGCAGGGGACGGGGGAGGCCGCTGGGGACCCGGCAGGTGACGGGGGAGGCCGC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2921499 97 - 123690457 CCGCG-------------------------GAAGTCCGGGCACGGTACGGGGGAGGCGGTGGCGGTCGGGGCAGGGAACGGGGGAGGCCGCTGGGGACCCGGCAGGTGACGGGGGAGGCCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179815279 97 - 180051392 CCGCA-------------------------GGGGTCGGGGCAGGGGACGGGGGAGGCCGCGGCGGTCGGGGCAGGGGACTGGGGAGGCCGCGGGGGACCCGACAGGGGACAGAGGAGGCCGC i rheMac8.chr6 I 5541 C 0 s chlSab2.chr4 1477628 97 + 91010382 CCGCG-------------------------GGGGTCGGGGCAGGGGACGGGGGAGGCCGCGACAGTCGGGGCAGGGGTCGGGGGCGGCCGCGGGGGTCGGGGCAGGGGACGGGGGAGGCCGC i chlSab2.chr4 C 0 I 9 s calJac3.chr2 204134798 97 + 204313951 acgca-------------------------gggaacccggcagcgaacgggggcggccgcgggagtcggggcaagggacgggggaggacgcaggggACCCGGCAGCGAACGGGGACTGCCGC i calJac3.chr2 C 0 C 0 e macNem1.NW_012013899v1 38054 3482 + 100774 I e saiBol1.JH378155 16276739 1514 + 16417988 M e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 70445 975 - 6207128 M e cerAty1.NW_012009470v1 557279 11 - 16742782 I e macFas5.chr6 1622143 0 + 181584905 C a score=7930.000000 s hg38.chr3_KI270934v1_alt 157605 9 + 163458 GGGGCAACC s panTro5.chr3 202078347 8 + 202621043 -GGGCAACC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 798839 9 + 837792 GGGGCAACC i gorGor5.CYUI01015777v1 C 0 I 31 s nomLeu3.chr11 2921596 9 - 123690457 GGGGCAACC i nomLeu3.chr11 C 0 I 61 s rheMac8.chr6 179815376 9 - 180051392 GGGGGAACC i rheMac8.chr6 C 0 C 0 s calJac3.chr2 204134895 7 + 204313951 --GAGAATC i calJac3.chr2 C 0 I 2 e macNem1.NW_012013899v1 38054 3482 + 100774 I e saiBol1.JH378155 16276739 1514 + 16417988 M e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 70445 975 - 6207128 M e chlSab2.chr4 1477725 9 + 91010382 I e cerAty1.NW_012009470v1 557279 11 - 16742782 I e macFas5.chr6 1622143 0 + 181584905 C a score=13927.000000 s hg38.chr3_KI270934v1_alt 157614 45 + 163458 GGCAGGGAACGGG-------------------------------GTTGGCCGCGGGGGTCGGGACACGGGTC------------------------------CGGG s panTro5.chr3 202078355 42 + 202621043 -GCAGGGAACGGG---------------------------------TGGCCGCGGGGGTCGGGACACGGGTC------------------------------CGGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 798879 76 + 837792 GGCAGGGGACGGGGGAGGCCGCTGGGGACCCGGCAGGGGTCGGGGTCGGCCGCGTGGGTCGGGGCAGGGGTC------------------------------GGGG i gorGor5.CYUI01015777v1 I 31 C 0 s nomLeu3.chr11 2921666 106 - 123690457 GGCAGGTGATGGGTGAGGCCGCGGGGAAACCGTCAGGGAACGGGGGCGGCCGCGGCGGTTGGGGCAGGGGTCGGGGTTGGGGTCGGCCGCGGGTTCGGGGCAGGGG i nomLeu3.chr11 I 61 C 0 s rheMac8.chr6 179815385 42 - 180051392 GGCAGTGAACCGG----------------------------------GTCCGCGGCGGTGGGGGCAGGAGTC------------------------------GGGG i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 1477734 33 + 91010382 GGCAG------GG----------------------------------GT---CGGGGGCGGCCGCGGGGGTC------------------------------GGGG i chlSab2.chr4 I 9 I 5 s calJac3.chr2 204134904 43 + 204313951 GGCAAGGGACGGA---------------------------------TGATGACGCAGGGCCCGGCACGGGAC------------------------------TGCG i calJac3.chr2 I 2 C 0 e macNem1.NW_012013899v1 38054 3482 + 100774 I e saiBol1.JH378155 16276739 1514 + 16417988 M e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 70445 975 - 6207128 M e cerAty1.NW_012009470v1 557279 11 - 16742782 I e macFas5.chr6 1622143 0 + 181584905 C a score=12420.000000 s hg38.chr3_KI270934v1_alt 157659 11 + 163458 GCAGCTGCGGG s panTro5.chr3 202078397 11 + 202621043 GCAGCTGCGGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 798955 11 + 837792 GCGGCTGCGGC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2921772 11 - 123690457 GCGGCTGCGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179815427 11 - 180051392 GCGGCCGCAGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1622143 11 + 181584905 GCGGTCGCCGC i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1477772 5 + 91010382 ---GCCGC--- i chlSab2.chr4 I 5 C 0 s calJac3.chr2 204134947 11 + 204313951 GCTGCCGCGGG i calJac3.chr2 C 0 C 0 e macNem1.NW_012013899v1 38054 3482 + 100774 I e saiBol1.JH378155 16276739 1514 + 16417988 M e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 70445 975 - 6207128 M e cerAty1.NW_012009470v1 557279 11 - 16742782 I a score=185161.000000 s hg38.chr3_KI270934v1_alt 157670 101 + 163458 -------GGAGGCGGGAGGTGCCGGGGCGGTGCCAG-----------GTGGCAGCTCTG-GAAGACGTTCCACAGGAAGCTCTGGTCGGGCAGCGC----------CGCGCCCG-------------CAGCAGGCCCAGGGCC s panTro5.chr3 202078408 98 + 202621043 -------GGAGGCGGGAGGTGCCGGGGCGGTGCCAG-------------GGCACCTCTGAGAATACGTTCCACAGGAAGCTCTGGTCGGGCAGCGC----------CG-GCCC--------------CAGCAGGCCCAGGGCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 798966 101 + 837792 -------GGAGGCGGGAGGTGCCGGGGCGGTGCCAG-----------GTCGCAGCTCTG-GAAGACGTTCCACAGGAAGCTGTGGTCGGGCAGCGC----------CCCGCCCG-------------CAGCAAGCCCCGGGCC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2921783 82 - 123690457 -------GGAGGCGGGGGGTGCGGGGGCAGTGCCAG-----------CCGGCACCTCTG-GAAGACGTTCCACAGGAAGCTCTGTTCTGGCAGCGC----------CCTGC-------------------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179815438 101 - 180051392 -------GGAGGCGGGAGGTGCTGGGGCGGTGCCAG-----------GCCGCACCTCTG-GAAGACGTTCCACAGAAAGCTCTGGTCCGGCAGCGC----------CGCGCCCG-------------CAGCAGGCCCTGGGCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1622154 94 + 181584905 -------GGAGGCGGGAGGTGCCCGGGCGGGGCCAG-----------GCCGCACCTCTG-GAAGACATTCCACAG-AAGCACTGGCCCGGCAGCGC----------CGCGCCCG-------------CAGCAAGCCC------ i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 557290 100 - 16742782 -------GGAGGCGGGAGGTGCTGGGGCGGTGCCAG-----------GCCGCACCTCTG-GAAGACGTTCCACAG-AAGCACTGGCCCGGCAGCGC----------CGCGCCCG-------------CAGCAAGCCCAGGGCC i cerAty1.NW_012009470v1 I 11 I 9 s chlSab2.chr4 1477777 94 + 91010382 -------GGAGGCGGGAGGTGCCCGGGCGGTGCCAG-----------GCCGCACCTCTG-GAAGACATTCCACAG-AAGCACTGGCCCGGCAGCGC----------CGCGCCCA-------------AAGCAAGCCC------ i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204134958 139 + 204313951 TCGGGCAGGATCCGGGCGCCGCGCAGAGCGAGCGAGTGAGGCGTGCAGCCGCA-CTCTG-GAAGACGTT-CACAG-GAGCTCTGGTCCGGCAGCGCNNNNNNNNNNCGAGCTCGGTACCCGGGGATCCCACTgggccggggcc i calJac3.chr2 C 0 C 0 e macNem1.NW_012013899v1 38054 3482 + 100774 I e saiBol1.JH378155 16276739 1514 + 16417988 M e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 70445 975 - 6207128 M a score=-1879.000000 s hg38.chr3_KI270934v1_alt 157771 10 + 163458 G---CCCAAGGCC s panTro5.chr3 202078506 9 + 202621043 G----CCGGGGCT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 799067 10 + 837792 G---CCCAGGGCC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2921865 8 - 123690457 -----CCGGGGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179815539 12 - 180051392 GG-CCCCGGGGCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1622248 2 + 181584905 -----------CC i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1477871 2 + 91010382 -----------CC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204135097 12 + 204313951 -ggccccggggcc i calJac3.chr2 C 0 C 0 e macNem1.NW_012013899v1 38054 3482 + 100774 I e saiBol1.JH378155 16276739 1514 + 16417988 M e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 70445 975 - 6207128 M e cerAty1.NW_012009470v1 557390 9 - 16742782 I a score=185076.000000 s hg38.chr3_KI270934v1_alt 157781 71 + 163458 GGGGCGGTAGGAGTAGGCGGCCAAGGGCC-------AAGGCGCGCGGCTGGGCTGAGGCACCTGCGGCCACGGGCGAC s panTro5.chr3 202078515 71 + 202621043 GGGGCGGTAGGAGTAGGCGGCCAAGGGCC-------AAGGCGCGCCGCTGGGCTGAGGCACGTGCGGCGACTGGCGAC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 799077 71 + 837792 GGGGCGGTAGGAGTAGGCGGCCAAGGGCC-------AAGGCGCGCGGCTGGGCTGAGGCACCTGCGGCCGCGGGAGAC i gorGor5.CYUI01015777v1 C 0 I 2 s nomLeu3.chr11 2921873 71 - 123690457 AGGGCGGTAGGAGTATGCGGCCAAGGGCT-------GAGGCGCGCGGCTGGGCTGAGGCGCCTGCGGCAACGGGAGAC i nomLeu3.chr11 C 0 I 2 s rheMac8.chr6 179815551 71 - 180051392 GGGGCGGTAGGAGTAGGCGGCCATGGGCC-------AAGGCGCGCGGCTGGGCTGAGGCTCCTACTGAGACGTGAGAC i rheMac8.chr6 C 0 I 2 s macFas5.chr6 1622250 78 + 181584905 GGAGCGGTAGGGGCAGGCGGCCAAGGGCCAAGGGCGAAGGCGCGCGGCCGGGCTGAGGCGCCTGCGGCGACGGGAGAT i macFas5.chr6 C 0 I 2 s cerAty1.NW_012009470v1 557399 71 - 16742782 GGAGCGGTAGGAGCAGGCGGCCAAGGGCC-------AAGGCGCGCGGCCGGGCTGAGGCGCCTGCGGCGACGGGAGAT i cerAty1.NW_012009470v1 I 9 I 2 s chlSab2.chr4 1477873 78 + 91010382 GGAGTGGTAGGAGCAGGCGGCCAAGGGCCAAGGGCCAAGGCGCGCGGCCGGGCTGAGGCGCCTCCGGCGACCGGAGAT i chlSab2.chr4 C 0 I 2 s calJac3.chr2 204135109 71 + 204313951 ggggcggTAGGAGTAGGCGGCCATGAGCC-------GATGCGCGCGTCTGGGCTGAGGCGCGGGCGGCTAAGGGAGAA i calJac3.chr2 C 0 I 2 e macNem1.NW_012013899v1 38054 3482 + 100774 I e saiBol1.JH378155 16276739 1514 + 16417988 M e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 70445 975 - 6207128 M a score=282028.000000 s hg38.chr3_KI270934v1_alt 157852 78 + 163458 CTCAGAGCGACTGTGCTTCCGCCTCTGCC-GGGGGCAGGGCCAGGCGTTACCGCCGCTTCCGGGGGCGCAGGAAATGCG s panTro5.chr3 202078586 78 + 202621043 CTCAGAGCGACACCACTTCCGCCTCTGCC-GGGGGCAGGGCCTGGCGTTACCGCCGCTTCCGGGGGCGCAGGAAATGCG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 799150 78 + 837792 CTCAGGGCGACTGCGCTTCCGCCTCTGCC-GGGGGCAGGGCCTGGCGTTACCGCCACTTCCGGGGGCGCAGGAAATGCG i gorGor5.CYUI01015777v1 I 2 C 0 s nomLeu3.chr11 2921946 75 - 123690457 CTCAGGGCGGCTCCGCTTCCGCCTCTGTC-GGGGGCGGGGCCTGGCGTTACCGCCGTTTC---GGGCGCAGGAAATGTG i nomLeu3.chr11 I 2 C 0 s rheMac8.chr6 179815624 78 - 180051392 CTCAGGGCGACTCCGCTTCCGGCTCTGCC-AGGGGCAGGGCCTGGCGTTACCTCCACTTCCGGGGGCGCAGGAAATGCG i rheMac8.chr6 I 2 I 146 s macFas5.chr6 1622330 78 + 181584905 CTCAAGGCGATTCCGCTTCCGCCTCTGCC-GGGGGCAGGGCCTGGCGTTACCGCCACTTCCGGGGGCGCAGGAAATGCG i macFas5.chr6 I 2 C 0 s macNem1.NW_012013899v1 41536 78 + 100774 CTCAGGGCGACTCCGCTTCCGGCTCTGCC-GGGGGCAGGGCCTGGCGTTACCTCCACTTCCGGGGGCGCAGGAAATGCG i macNem1.NW_012013899v1 I 3482 C 0 s cerAty1.NW_012009470v1 557472 78 - 16742782 CTCAAGGCGATTCCGCTTCCGCCTCTGCC-GGGGGCAGGGCCTGGCGTTACCGCCACTTCCGGGGGCGCAGGAAATGGG i cerAty1.NW_012009470v1 I 2 C 0 s chlSab2.chr4 1477953 79 + 91010382 CTCAAGGCGATTCCGCTTCCGCCTCTGCCAGGGGGCAGGGCCTGGCGTTACCGCCACTTCCGGGGGCGCAGGAAATGCG i chlSab2.chr4 I 2 C 0 s calJac3.chr2 204135182 77 + 204313951 CTCAGGGCGACTCCGCTTCCGGGTCTGCC-GGGGGCAGGACTTGGCG-TACCGTCACTTCCGGGGACGCAGGAAACGCG i calJac3.chr2 I 2 C 0 e saiBol1.JH378155 16276739 1514 + 16417988 M e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 70445 975 - 6207128 M a score=-8699.000000 s hg38.chr3_KI270934v1_alt 157930 3 + 163458 CGT- s panTro5.chr3 202078664 3 + 202621043 CGT- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 799228 3 + 837792 CGT- i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2922021 3 - 123690457 CGT- i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1622408 2 + 181584905 T-G- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41614 3 + 100774 TAG- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 557550 2 - 16742782 -TG- i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1478032 2 + 91010382 -TG- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204135259 3 + 204313951 -TGA i calJac3.chr2 C 0 I 97 e saiBol1.JH378155 16276739 1514 + 16417988 M e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 70445 975 - 6207128 M e rheMac8.chr6 179815702 146 - 180051392 I a score=21814.000000 s hg38.chr3_KI270934v1_alt 157933 10 + 163458 TGTCCGGGAT s panTro5.chr3 202078667 10 + 202621043 TGTCCGGGAT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 799231 10 + 837792 TGTCCGGGAT i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2922024 10 - 123690457 TGTCCGGGAT i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1622410 10 + 181584905 TGCGCGGGAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41617 10 + 100774 TGTCCGGGAT i macNem1.NW_012013899v1 C 0 I 135 s cerAty1.NW_012009470v1 557552 10 - 16742782 TGCGCGGGAT i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1478034 10 + 91010382 TGCGCGGGAT i chlSab2.chr4 C 0 C 0 e saiBol1.JH378155 16276739 1514 + 16417988 M e calJac3.chr2 204135262 97 + 204313951 I e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 70445 975 - 6207128 M e rheMac8.chr6 179815702 146 - 180051392 I a score=34411.000000 s hg38.chr3_KI270934v1_alt 157943 31 + 163458 CCTCCGGCGCAGGCCACCTGCGCGCGGGGCC s panTro5.chr3 202078677 30 + 202621043 CCTCCGGCGCGGGCCACCTGCGCGCGGGG-C i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 799241 30 + 837792 CCTCCGGCGCAGGCCACCTGCGCGCGGGG-C i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2922034 31 - 123690457 CGTCCCGCGCAGACCAGCTGCGGGCGGGGCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1622420 29 + 181584905 GCTCCGGCGC-GGCCGCCTGGGCGCGGTG-C i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 557562 29 - 16742782 GCTCCGGCGC-GGCCGCCTGGGCGCGGTG-C i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1478044 29 + 91010382 GCTCCGGGGC-GGCCACCTGGGCGCGGTG-C i chlSab2.chr4 C 0 C 0 e macNem1.NW_012013899v1 41627 135 + 100774 I e saiBol1.JH378155 16276739 1514 + 16417988 M e calJac3.chr2 204135262 97 + 204313951 I e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 70445 975 - 6207128 M e rheMac8.chr6 179815702 146 - 180051392 I a score=10197.000000 s hg38.chr3_KI270934v1_alt 157974 4 + 163458 GGGA s panTro5.chr3 202078707 4 + 202621043 GGGA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 799271 4 + 837792 GGGA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2922065 4 - 123690457 GGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179815848 4 - 180051392 GGGA i rheMac8.chr6 I 146 C 0 s macFas5.chr6 1622449 4 + 181584905 GTGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41762 4 + 100774 GGGA i macNem1.NW_012013899v1 I 135 C 0 s cerAty1.NW_012009470v1 557591 4 - 16742782 GTGA i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1478073 4 + 91010382 GTGA i chlSab2.chr4 C 0 C 0 e saiBol1.JH378155 16276739 1514 + 16417988 M e calJac3.chr2 204135262 97 + 204313951 I e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 70445 975 - 6207128 M a score=195844.000000 s hg38.chr3_KI270934v1_alt 157978 63 + 163458 AGGCGCTTGGAGGAAATGTCCCGCGCCGCGACCCGGGACAGGCAGTGATGGAGCAGGGATTTC s panTro5.chr3 202078711 63 + 202621043 AGGCGCTTGGAGAAAACGTCCCGCGCCGCGACCCGGGACAGGCAGTGATGGAGCAGGGACTTA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 799275 63 + 837792 AGGCGCTTGGAGAAAATGTCCCGCGCCGCGACCCGGGACAGGCAGTGATGGAGCAGGGATTTA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2922069 63 - 123690457 AGGCGCTTGGAGAAAATGTCCTGCGCAGCGACCCGGGACAGGCAATGATGGAGCAGGGATTTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179815852 63 - 180051392 AGGCGCTTGGAGAAAATGTCCGGCTCTGCGACCCGGGACGGGAAGTGATGGAGTAGGGAGTTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1622453 59 + 181584905 AGGCGCTTGGGGAAAATGCCCCGCGCCGCGATCCGGGACGGGAAGTGATGGAGCAAGG----A i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41766 59 + 100774 AGGCGCTTGGAGAAAATGTCCGGCTCTGCGACCCGGGACGGGAAGTGATGGAGTAGGG----A i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 557595 61 - 16742782 AGGCGCTTGGGGAAAATGCCC--CGCCGCGATCCGGGACGGGAAGTGATGGAGCAAGGACTTA i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1478077 63 + 91010382 AGGCGCTTGGGGAAAATGCCCCGCGCCGCGACCCAGGACGGGAAGTGATGGAGCAAGGACTTA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204135359 63 + 204313951 AGGCGCGTGGAGGAAGTGTCCAGCGACGAGTCCCGGGACTGGAAGTGATGGAGCAGAGTCCGA i calJac3.chr2 I 97 C 0 e saiBol1.JH378155 16276739 1514 + 16417988 M e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 70445 975 - 6207128 M a score=476557.000000 s hg38.chr3_KI270934v1_alt 158041 109 + 163458 GTTTGCCTTTTAGTTCTTGTATAAAAAGAAGTTTTGACGTGAATATGATTCACGCTAACAGTCGGAAACTCTGggcggggcgcggtagctcacacctgggatccctgcg s panTro5.chr3 202078774 109 + 202621043 GTTTGCCTTTTAGTTCTTGTATAAAAAGAAGTTTTGACGTGAATATGATTCACGCTAACAGTGGGAAACTCTGggcggggcgcggtagctcacacctgtgatccctgcg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 799338 109 + 837792 GTTTGCCTTTTAGTTCTTGTATAAAAAGAAGTTTTGACGTGAATATGATTCACGCTAACAGTCGGAAACTCTGggcggggcgcggtagctcacacctgtgatccctgcg i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2922132 109 - 123690457 GTTTGCCTTTTAGTTCGTGTATAAAGAGAAGTTTTGACGTGAATATGATTCCCGCTAACAGTCGGAAACTCTGggcgggacgcggtagctcacacctgtgatccctgcg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179815915 109 - 180051392 GTTAGCCTTTCAGTTCATGTATAAAAAGAAGTTTTGACGTGAATGTGATTCAGGCTAACAGTCGGAAACTCTGggcggggcgcggtagctcacgcctgtgatccctgcg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1622512 109 + 181584905 CTTAGCCTTTTAGTTCTCTTATAGAAAGAAGTTTTGACGTGAATGTGATTCAGGCTAACAGTCGGAAACTCTGggcggggcgcggtagctcacgcctgtgatccctgcg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41825 109 + 100774 GTTAGCCTTTCAGTTCATGTATAAAAAGAAGTTTTGACGTGAATGTGATTCAGGCTAACAGTCGGAAACTCTGggcggggcgcggtagctcacgcctgtgatccctgcg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 557656 109 - 16742782 GTTTGCTTTTTAGTTCTTTTATGGAAAGAAGTTTTGACGTGAATGTGATTCAGGCTAACAGTCGGAAACTCTGggcggggcgcggtagctcacgcctgtgatccctgcg i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1478140 109 + 91010382 GTTTGCCTTTTAGTTCTTTTATAGAAAGAAGTTTTGACGTGAATGGGATTCAGGCTAACAGTCCGAGACTCTGggcggggcgcggtagctcacgcctgtgatccctgcg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 71431 109 - 6207128 GTTTGCCTTTTAGTTCTTTTATAGAAAGAAGTTTTGACGTGAATGTGATTCAGGCTAACAGTCGGAAACTCTGggcggggcgcggtagctcacgcctgtgatccctgcg i manLeu1.NW_012109696v1 M 975 C 0 s calJac3.chr2 204135422 91 + 204313951 GTTTGCCTTTCAGTTCTTGTATAAAAAGAAGTTTTGACGCGAGCGTGATTCACACTAACAGTCGAAAACTCTGGGCGGGG-GCG-----------------tcccggcg i calJac3.chr2 C 0 C 0 e saiBol1.JH378155 16276739 1514 + 16417988 M e colAng1.NW_012118799v1 474179 1850 - 514179 M a score=271348.000000 s hg38.chr3_KI270934v1_alt 158150 164 + 163458 ctttgtgaggcggaggcgggcggagctcttgagcccagcagtgcggaccagcctgggcagcggggctagaccccatccctacaaaaattacagcaagtagtcgggcgtggtgg---gctcctgtggtcccatgtactccgtgggctgaggcgggaggatcgcctgag s panTro5.chr3 202078883 162 + 202621043 ctttgggaggcggaggcgggcggagctcttgagcccagcagtgcggaccagcctgggcagcgtggctagaccccatccctacaaaaattacagcaagtagtcgggcgt-gtgg---gctcctgtggtcccatgtactccgt-ggctgaggcggcaggatcgcctgag i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 799447 167 + 837792 ctttgggaggcggaggcgggcggagctcttgagcccagcagtgcggaccagcctgggcagcgtggctagaccccatccctacaaaaattacaGCAAGTAgtcgggcgtggtggcgcgctcctgtggtcccatctactccatgggctgaggcgggaggatcacttgag i gorGor5.CYUI01015777v1 C 0 I 3677 s nomLeu3.chr11 2922241 167 - 123690457 ctttggaaggtggaggcgggcggagctcttgagcccagcagttgggaccagcctgggcagcgtggctagaccccatccctacaaaaattacaaaaagtagtcgggcgtggtggcgggctcctgtggtcccatctactccgtgggctgaggcggcaggatcgcctgag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179816024 167 - 180051392 ctttgggaggcggaggcgggcggagctcctgagcccaccagttcggaccagcctgggcagcgtggccagactccatccctacaaaaattgcagaaaatagtcgggcgtggtggcgggcccctgtggtcccatctactccatgggcagaggcgggaggatcgcctgag i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 41934 167 + 100774 ctttgggaggcggaggcgggcggagcccctgagcccaccagttcggaccagcctgggcagcgtggccagaccccatccctacaaaaattgcagaaaatagtcgggcgtggtggcgggcccctgtggtcccatctactccatgggcagaggcgggaggatcgcctgag i macNem1.NW_012013899v1 C 0 C 0 s calJac3.chr2 204135513 166 + 204313951 ctttgggaggcggaggcgggcggagctgttgagtccagcacttcggcccggcctgggcagcttggcgaaacttcatccctacaaaaattacag-aagccgccgggcgcggtggcgggctcctgtgggcctagctgccccgggggctgaggcgggaggatcgcctgag i calJac3.chr2 C 0 C 0 e saiBol1.JH378155 16276739 1514 + 16417988 M e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 71540 0 - 6207128 C e chlSab2.chr4 1478249 0 + 91010382 C e cerAty1.NW_012009470v1 557765 0 - 16742782 C e macFas5.chr6 1622621 0 + 181584905 C a score=13479.000000 s hg38.chr3_KI270934v1_alt 158314 16 + 163458 cccgggaggtcgaggc s panTro5.chr3 202079045 16 + 202621043 cccgggaggtcgaggc i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2922408 16 - 123690457 cctgggagctggaggc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179816191 16 - 180051392 cccgggaagtcgaggc i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 42101 16 + 100774 cccgggaagtcgaggc i macNem1.NW_012013899v1 C 0 C 0 s calJac3.chr2 204135679 14 + 204313951 ccc--tcagtcggggc i calJac3.chr2 C 0 C 0 e saiBol1.JH378155 16276739 1514 + 16417988 M e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 71540 0 - 6207128 C e chlSab2.chr4 1478249 0 + 91010382 C e cerAty1.NW_012009470v1 557765 0 - 16742782 C e macFas5.chr6 1622621 0 + 181584905 C e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=93842.000000 s hg38.chr3_KI270934v1_alt 158330 68 + 163458 cgcagggagccgagatcactgcagctccagcccggtggacagcgagactctgc---------aaaaaaaaaaaaaaa s panTro5.chr3 202079061 76 + 202621043 cgcagggagccgagatcactgca-ctccagcccggtggacagcgagactctgcaaaaaaaaaaaaaaaaaaaaaaaa i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2922424 68 - 123690457 tgcagggagccgagatcacggcaactccagcctggtggacagcgagactctga---------aaaaaaaaaaaaaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179816207 61 - 180051392 cgcagggagccgagatcactgca-ctccagcccggtggacagccagactctgc---------caaaaaaaa------ i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 42117 67 + 100774 cgcagggagccgagatcactgca-ctccagcccggtggacagccagactctgc---------caaaaaaaaaaaata i macNem1.NW_012013899v1 C 0 C 0 s calJac3.chr2 204135693 67 + 204313951 ctcagggagccgagatcactgca-ctccagcccggtcgaccgccagactctgc---------cagaaaagaaaaaaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16278257 65 + 16417988 CGCAGGGAGCCGAGGTCACTGCG-CTCCAGCCCGGCCGACCGCCAGA--CTGC---------CAGAAAAGGGAAAAA i saiBol1.JH378155 M 1514 C 0 e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 71540 0 - 6207128 C e chlSab2.chr4 1478249 0 + 91010382 C e cerAty1.NW_012009470v1 557765 0 - 16742782 C e macFas5.chr6 1622621 0 + 181584905 C e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=30730.000000 s hg38.chr3_KI270934v1_alt 158398 47 + 163458 aaa-----aGCAAGCAggccgggtgcggtggctgacgcgtgtaatcccagca s panTro5.chr3 202079137 45 + 202621043 aaa-----aaaaaGCAggcc-ggtgcggcggctgacgcgtgtaat-ccagca i panTro5.chr3 C 0 C 0 s rheMac8.chr6 179816268 44 - 180051392 --------aaaaaGCAggccgtgcgcagtgtctgacgcctgtaatcccagga i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 42184 51 + 100774 -aataaataaaaaGCAggccgtgcgcagtgtctgacgcctgtaatcccagga i macNem1.NW_012013899v1 C 0 C 0 s calJac3.chr2 204135760 43 + 204313951 ---------aaaTGCAggccgggcgcggtggctcacgcctgtaatctcagca i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16278322 43 + 16417988 ---------AAATGCATgcccggcgcgggcgctcacgcctgtcatctcagaa i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 474179 1850 - 514179 M e manLeu1.NW_012109696v1 71540 0 - 6207128 C e chlSab2.chr4 1478249 0 + 91010382 C e cerAty1.NW_012009470v1 557765 0 - 16742782 C e macFas5.chr6 1622621 0 + 181584905 C e nomLeu3.chr11 2922492 0 - 123690457 C e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=277985.000000 s hg38.chr3_KI270934v1_alt 158445 84 + 163458 ctttgggaggccgaggccggtggatcacctgaagtcaggagttcgagaccaacctggccaatatggaga-aacccagtatctact s panTro5.chr3 202079182 84 + 202621043 ctttgggaggccgaggccggtggatcacctgaagtcgggagttcaagaccaacctggccaatatggaga-aacccagtatctact i panTro5.chr3 C 0 C 0 s rheMac8.chr6 179816312 83 - 180051392 ctttgggaggtcgaggccggtggatcacctgaagtcgggagttc-agaccagcctgaccaatatggaga-aaccccgtatctact i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1622621 84 + 181584905 ctgtgggaggccgaggccggtggatcacctgaagtcgggggttcgagaccagcctggccaatattgaga-aacctcgtatctact i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 42235 84 + 100774 ctttgggaggtcgaggccggtggatcacctgaagtcgggagttcgagaccagcctgaccaatatggaga-aaccccgtatctact i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 557765 83 - 16742782 ctgtgggaggcc-aggcccgtggatcacctgaagtcgggggttcgagaccagcctggccaatattgaga-aacctcgtatctact i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1478249 84 + 91010382 ctgtgggaggccgaggccggtggatcacctgaagtcgggggttcgagaccagcctggccaatattgaga-aacctcgtatctact i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 71540 84 - 6207128 ctgtgggaggccgaggccggtggatcacctgaagtcgggggttcgagaccagcctggccaatattgaga-aacctcgtatctact i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr2 204135803 85 + 204313951 ctttgggaggctgaggcgggcggatcacctgaggtgggatgttcgagaccagcctgaccaacatggagacacccctgtctctgct i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16278365 84 + 16417988 ccttgtgaggctga-gcgcgcgcatcaccggaggtcggaagttcgagaccagcctgaccaacatggagacaaccccgtctctgct i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 474179 1850 - 514179 M e nomLeu3.chr11 2922492 0 - 123690457 C e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=575255.000000 s hg38.chr3_KI270934v1_alt 158529 154 + 163458 aaaaatac-----------aaaattagccgggcgtggtggcgcacgcctgtaatcccagctactcgggacgctgaggcaggagaattgcttgaacccgggaggcggaggttgcagtgagccgagatcaggccattgcactccaggcctgggcaacaagagcaaaa s panTro5.chr3 202079266 151 + 202621043 aaaaatac-----------aaaattagccgggcttg--tgcgcacgcctgtaatcccagctactcgggacgctgaggcaggagaa-tgcttgaacccgggaggcggaggttgcagtgagccgagatcaggccattgcactccaggcctgggcaacaagagcaaaa i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2922492 165 - 123690457 aaaaaCACACACACACAAaaaaacaggccgggtgcggtggctcacgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaatccgggaggcggagattgcagtgagccgagatcaggccattgcactccaggcctgggcaacaagagcaaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179816395 152 - 180051392 aaatatac-----------aaaattagccgggggtggtggcacacgcctat--tcccagctactcgggaggctgaggcaggagaactgcttgaagccgggaggcggaggttgcagtgagcggagatcaggccgttgcactccaggcctgggcaacaagagcgaaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1622705 154 + 181584905 aaaaatat-----------aaaattagccgggcgtggtggcgcacgcctgtaatcccagctgctcgggaggctgaggcaggagaattgcttgaacccgggaggccgaagttgcagtgagccgagatcgggctattgcactccaggcctgggcaacaagagagaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 42319 152 + 100774 aaatatac-----------aaaattagccgggggtggtggcgcacgcctat--tcccagctactcgggaggctgaggcaggagaactgcttgaagccgggaggcggaggttgcagtgagcggagatcaggccgttgcactccaggcctgggcaacaagagcgaaa i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 557848 154 - 16742782 aaaaatac-----------aaaattagccgggcgtggtggcgcacgcctgtaatcccagctgctcgggaggctgaggcaggagaattgcttgaacccgggaggccgaggttgcagtgagccgagatcgggctattgcaagccaggcctgggcaacaagagagaaa i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1478333 154 + 91010382 aaaaatac-----------aaaattagccgggcgtggtggcgcacgcctgtaatcccagctgcgcgggaggctgaggcaggagaattgcttgaacccgggaggccgaagttgcagtgagccgagatcgggctattgcactccaagcctgggcaacaagagagaaa i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 71624 154 - 6207128 aaaaatac-----------aaaattagccgggcgtggtggcgcacgcctgtaatcccagctgctcgggaggctgaggcaggagaattgcttgaacccgggaggccgaggttgcagtgagccgagatcgggctattgcactccaggcctgggcaacaagagagaaa i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr2 204135888 114 + 204313951 aaaaatac-----------aaaatta-------------gagcaagcccgtaatcccagctactctggagact--------------------------gaggcggaggttgtagtgagccgagatcgcgccattgtactcca-gcctgggcaacgacagcgaaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16278449 132 + 16417988 aaaaatac-----------aaaatta-------------gcgcgagcccgtcatcccagccactctggagactgaggcaggagaatcgct--------ggaggcggaggtggcagtgagccgagatcgcgccgttgcactcca-gcctgggcagcaagagcgaaa i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 474179 1850 - 514179 M e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=217019.000000 s hg38.chr3_KI270934v1_alt 158683 106 + 163458 ctccgtct----caaaaaaaaaaaaaaaaaaaaaaaaGGCAAAGCACAATTCGCGTGGGAAGGGCAGTGTGCAGCGTTCTCCGTTGTCTGTTCCGCCCCCAAAAGCTTCC s panTro5.chr3 202079417 108 + 202621043 -tccgtctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGGCAAAGCACAATTCGCGTGGGAAGGGCAGTGTGCAGCGTTCTCCGTTGTCTGTTCCGCCCCC-AAAGCTTCC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2922657 93 - 123690457 ctccgtct-----------------caaaaaaaaaaaGGCAAATCACAATTCGGGTGGGAAAGGCAGTGTGCAGCGTTCTCTGTTGTCTGTTCCACCCTGAAAAGCTTCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1622859 98 + 181584905 ctctgtct-----caaaaagaaaaaagaaaaaaaaaaggtaaaaCACAATTCGGGTGGGAAGGGCAGTGTGCAG-------TGTTGTCTGTTCCGCCCCCAAAAGCTTCC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 558002 98 - 16742782 ctccgtct-----caaaaagaaaaaagaaaaaaaaaaggtaaaaCACAATTCGGATGGGAAGGGCAGTGTGCAG-------TGTTGTCTGTTCCGCCCCCAAAAGCTTCC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1478487 98 + 91010382 ctccgtct-----caaaaagaaaaaagaaaaaaaaaaggtaaaaCACCATTCGGGTGGGAAGGGCAGTGTGCGG-------TGTTGCCTGTTCCGCCCCCAAAAGCTTCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 71778 91 - 6207128 ctccgtct-----c-------aaaaagaaaaaaaaaaggtaaaaCACAATTCGGGTGGGAAGGGCAGTGTGCAG-------TGTTGTCTGTTCCGCCCCCAAAAGCTTCC i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr2 204136002 94 + 204313951 ctccatct-----c-----------aaaaaaaaaaaaagcaaaaCACAATTCAGGTGAGAAGCACAGTGTGCGGCGTTCTCCGTCGTCTCTTCCGTCCTCGAAAGCTTCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16278581 91 + 16417988 ctccatct-----c--------------aaaagagaaagcaaaaCACAATTCGGGTGAGAAGCGCCGTGTGCGGCGTTCTCCGTCGTCTCCTCCGCCCTCGAAAGCTTCC i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 42471 0 + 100774 C e colAng1.NW_012118799v1 474179 1850 - 514179 M e rheMac8.chr6 179816547 0 - 180051392 C e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=169785.000000 s hg38.chr3_KI270934v1_alt 158789 55 + 163458 CTCCTTTAGGTTTAACCTGCGCCCCCGCGCTCTGCATCAGCGCGGTCCCCGA--CCG s panTro5.chr3 202079525 53 + 202621043 CTCCTTTAGGTTTAACCTGCG-CCCCGCGCTCTGCATCAGCGCGGT-CCCGA--CCC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2922750 56 - 123690457 CTCTTTTAGGTTTAACCTGCTCCCCCACGCTCTGCATCAGCGCTGC-CCTGGACCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179816547 54 - 180051392 ctccTTTAGGTTTAACCTGCGCCCCCGCGCTCTGCCTCAGCGCCGCCCCCGA--CG- i rheMac8.chr6 C 0 I 2 s macFas5.chr6 1622957 55 + 181584905 CTCTTTTAGGTTTAGCCTGCGCCCCCACGCTCTGCATCAGCGCCACCCCCGA--CGC i macFas5.chr6 C 0 I 9 s macNem1.NW_012013899v1 42471 54 + 100774 ctccTTTAGGTTTAACCTGCGCCCCCGCGCTCTGCCTCAGCGCCGCCCCCGA--CG- i macNem1.NW_012013899v1 C 0 I 2 s cerAty1.NW_012009470v1 558100 55 - 16742782 CTCTTTTAGGTTTAGCCTGCGCCCCCGCGCTCTGCATCAGCGCCACCCCCGA--CGC i cerAty1.NW_012009470v1 C 0 I 9 s chlSab2.chr4 1478585 55 + 91010382 CTCTTTTAGGTTTAGCCTGCGCCCCCGCGCTCTGCATCAGCGCCACCCCCGA--CGC i chlSab2.chr4 C 0 I 9 s manLeu1.NW_012109696v1 71869 55 - 6207128 CTCTTTTAGGTTTAGCCTGCGCCCCCGCGCTCTGCATCAGCGCCACCCCCAA--CGC i manLeu1.NW_012109696v1 C 0 I 9 s calJac3.chr2 204136096 51 + 204313951 ---CTCTGGGTTTAACCTGTgccc-cgcgcggggcagcagcgcggcccccgc--ccc i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 16278672 49 + 16417988 ---CTCTGGGTGTAACCTGTGCCCACGTCCCGGGCATCAGCAGG---CCCGC--CCG i saiBol1.JH378155 C 0 I 1 e colAng1.NW_012118799v1 474179 1850 - 514179 M e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=840158.000000 s hg38.chr3_KI270934v1_alt 158844 198 + 163458 GTGCAGCTGG-AAACAC-T-GGGCGCCTCCCTGCCGGGCCCCTTCCCGCCCC--TGTGGTGGTGCAGCCCTGCCTCCCGC--AAGA-----CAGCACTGCCTTCGTGCTGGACACAGTTCTATGGTGGAGCCTGGAGTGCCTGTATC--------ACAAAT-CCCGGAGTTGGGAAGTGCC--CACCT----TTGGGCCAGTGTGATCCCTGGGTCTTT--CCCG---GG s panTro5.chr3 202079578 194 + 202621043 GTGCAGCTGGAAAACAC-T-GG--GCCTCCCTGCC--GCGCCTTCCCGCCCC--GGTGGTGGTGC-GCCCTG-CTCCCGC--AAGA-----CAGCACTGCCTTCGTGCTGGACACAG-TCTATGGTGGAGCCTGGAGTGCCTGTAGC--------ACAAAT-CCCGGAGTT-GGAAGTGCCCACACCT----TTGGGCCAGTGTGAT-CCTGGGTCTTT--CCCGC-CGG i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2922806 202 - 123690457 ATGCAGTTGG-AAACAC-T-GGGCGCCTTTCTGCGGGGCCCCTTCCCGCCCC--AGTGGTGGTGCAGCCCTGCCTCCCCC--GAGA-----CAGCACTGCCTTCGTGCTGGACACAGTTCTACCGTGGAGCCTGGAGTGCCTGTAGC--------ACAAATCCCCAGAATTGGGAAGTGCC--CAGCT----TTGGGCCACTGTGATCCCTGGGTCTTT--CCCGCGCGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179816603 194 - 180051392 GTGCAGCTGG-CAACAC-T-GGGCGCCTCCCTGCCCGGTCCCTTCCCGCCCCTTGGTGGTGGTGCAGCCCTGTCTCCCCC--GAGA-----CAGCACTGCCTCCGTGCTGGACACGGTTCTGCGGTGGAGCCTGGAGTGCCTGTAGC--------ACCAATCCCCGGAATTGGGAAGTGCC--CAGCT----TTGGGCCACTATGATCCCTGGAT-CTT----------- i rheMac8.chr6 I 2 C 0 s macFas5.chr6 1623021 199 + 181584905 GTGCAGCTGG-AAACAC-T-GGGCGCCTCCCTGCCTGACCCCTTCCCGCCCC-TGGTGGTGGTGCAGCCCTGTCTCCCCC--GAGA-----CAGCACTGCCTCCGTGCTGGACACAGTTCTGCGGTGGAACCTGGAGTGCCTGTAGC--------ACCAATCGCCGGAATTGGGAAGTGCC--CAGCT----TTGGGCCACTGTGATCCCTGGGT-TTT--CCCGCG--- i macFas5.chr6 I 9 I 3 s macNem1.NW_012013899v1 42527 182 + 100774 GTGCAGCTGG-CAACAC-T-GGGCGCCTCCCTGCCCGGTCCCTTCCC------------TGGTGCAGCCCTGTCTCCCCG--GAGA-----CAGCACTGCCTCCGTGCTGGACACGGTTCTGCGGTGGAGCCTGGAGTGCCTGTAGC--------ACCAATCCCCGGAATTGGGAAGTGCC--CAGCT----TTGGGCCACTGTGATCCCTGGGT-CTT----------- i macNem1.NW_012013899v1 I 2 C 0 s cerAty1.NW_012009470v1 558164 200 - 16742782 GTGCAGCTGG-AAACAC-TGGGGCGCCTCCCTGCCTGACCCCTTCCCGCCCC-TGGTGGTGGTGCAGCCCTGTCTCCCGC--GAGA-----CAGCACTGCCTTCGTGCTGGACACAGTTCTGCCGTCGAGCCTGGAGTGCCTGTAGC--------ACCAATCCCCGGAATTGGGAAGTGCC--CAGCT----TTGGGCCACTGTGATCCCTGGGT-TTT--CCCGCG--- i cerAty1.NW_012009470v1 I 9 I 3 s chlSab2.chr4 1478649 199 + 91010382 GTGCAGCTGG-AAACACGG-GGGCGCCTCCCTG-CTGACCCCTTCCCGCCCC-TGGTGGTGGTGCGGCCCTGCCTCCCGC--GAGA-----CAGCACTGCCTTCGTGCTGGACACAGTTCTGCGGTGGAACCTGGAGTGCCTGTAGC--------ACCAATCCCCGGAATTGGGAAGTGCC--CAGCT----TTGGGCCACTGTGATCCCTGGGT-TTT--CCCGCG--- i chlSab2.chr4 I 9 I 3 s manLeu1.NW_012109696v1 71933 200 - 6207128 GTGCAGCTGG-AAACAC-T-GGGCGCCTCCCTGCCTGACCCCTTCCCGCCCC-TGGTGGTGGTGCAGCCCTGCCTCCCCC--GAGA-----CAGCACTGCCTCCGTGCTGGACACAGTTCTGCGGTGGAGCCTGGAGTGCCTGTAGC--------ACCAATCGCCGGAATTGGGAAGTGCC--CAGCT----TTGGGCCACTGTGATCCCTGGGTCTTT--CCCGCG--- i manLeu1.NW_012109696v1 I 9 I 14 s colAng1.NW_012118799v1 476048 198 - 514179 GTGCAGCTGG-AAACAC-T-GGGCGCCTCCCTGCCCGGTCCCTTCCCGCCCC---GTGGTGGTGCAGCCCTGCCTCCCCC--GAGA-----CAGCACTGCTTCCATGCTGGACACAGTTCTGCGGTGTAGCCTGGAGTGCCTGTAGC--------ACCAATCCCCGGAATTGGGAAGTGCC--CAGCT----TTGGGCCACTGTGATCCCTGGGTCTTT--GCCGCG--- i colAng1.NW_012118799v1 M 1850 I 3 s calJac3.chr2 204136148 210 + 204313951 gTGCAGCTGG-AAACAC-T-cggcgccccccggccgggcccTT--------C-TGGTGGTCGCGCAGCCCAGCCTCCCTCCTGAGAGGGAGGAGCACTGCCTTGGTGCTGGGCGCAGTTCTACAGTGGAGCCCGGAGTGCTTGTAGCCGAAACCTACAAATCCCCGGAATTGGGAAGTGC---CGGCTTCGGTCGGGCAACTGCGATCCCCGGGTCTTT--CCCGTG--- i calJac3.chr2 I 1 I 9 s saiBol1.JH378155 16278722 203 + 16417988 GTGCAGCTGG-AAACAC-T-GGGCGCCCCCCTGCCGGGCCCAT--------C-TGCTGGTCGCGCGGCCCAGCCTCGCTCCTGAGA-----CAGCACTGCCTTGGTGCTGGGCACAGTTCTACAGTGGAGCCTGGAGTGCTTGTAGCCGAAACCTACAAATCCCCGGAATTGGGCAGTGC---CAGCT----TTGGGCGACTGTGATCCCTGGGTCTTTGCCCCGCG--- i saiBol1.JH378155 I 1 I 9 e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=49706.000000 s hg38.chr3_KI270934v1_alt 159042 23 + 163458 GTGGTCTCATGCGGCCTTCCACT s panTro5.chr3 202079772 23 + 202621043 GTGGTCTCATGCGGCCTTCCACT i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2923008 23 - 123690457 GTAGTCTCGTGCTGCCTTCCACG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179816797 14 - 180051392 ---------TGCCGCCTTCCACC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1623223 22 + 181584905 GTACTC-CGTGCTGCCTTCCACC i macFas5.chr6 I 3 C 0 s macNem1.NW_012013899v1 42709 14 + 100774 ---------TGCCGCCTTCCACC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 558367 22 - 16742782 ATACTC-CGTGCCGCCTTCCACC i cerAty1.NW_012009470v1 I 3 C 0 s chlSab2.chr4 1478851 22 + 91010382 GTACTC-CGTGCCGCCTTCCACC i chlSab2.chr4 I 3 C 0 s colAng1.NW_012118799v1 476249 23 - 514179 GTAGTCTCGTGCCGCCTTCCACC i colAng1.NW_012118799v1 I 3 C 0 s calJac3.chr2 204136367 23 + 204313951 GCGCTCTCGGCGCGCGTTCCATC i calJac3.chr2 I 9 C 0 s saiBol1.JH378155 16278934 23 + 16417988 GCGCTTTCAGTCGGCGTTCCACC i saiBol1.JH378155 I 9 C 0 e manLeu1.NW_012109696v1 72133 14 - 6207128 I e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=800295.000000 s hg38.chr3_KI270934v1_alt 159065 176 + 163458 CCAGTCCTGTGTCCTGTGCCCCG-GTT--------------------CAGAATACTACAATTATTCTCGTTATTTCATGGGGTTATTCCAGCTTTTCAGTTTCGTCAGTGCCTCATTCCATGAATGCTAACTTTTTTCATCCTCATAGTTCCTAGGGTTGTCTCTGAATTTTCACCCAGTTGCCTACCAAGATGTTG s panTro5.chr3 202079795 169 + 202621043 CCAGTCCTGTGTCCTGT-CCCCG-GTT--------------------CAGAATACTACAATTATTCTC-TTA-TTCATGGGGTTATTCCAGCTTTT-AGTTTCTTCAGTGCCTCATTCCATGAATGCTAAC-TTTTTCATCC-CATAGTCCTTAGGGTTGTCTCTGAATTTTCACCCAGTTGCCTACCAA-ATGTTG i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2923031 175 - 123690457 TCAGCCCTGTGTCCCGTACCTCA-GTT--------------------CAGGGTACTACAGTTATTCTCATTACTTCATGGGGTTATTCCAGCTTTTCAGGTTCTTCAGTGCCTCATCCCATGAATGCTAACTTTTTTCATCCTCATAGTTC-TAGGGTTGTCTCTGAATTTTCACCCAGTTGCCTACCAAGATGTTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179816811 186 - 180051392 CCAgtcctgtgtcctgtgtcctgtgtcctgtgccctg-------GTTCAGGATACTACAATTATTCTTATTATTTCGTGGGGTTTTTCCAGCTTTTCAGGTTCTTCAGTGCCTCATTCCACTAATGCT----CTTTTCATCCTTGTAGTTCCAAGCGTTGTCTCTGAATTTTCACTAATTTGCCTGCCaagatgttg i rheMac8.chr6 C 0 I 3554 s macFas5.chr6 1623245 186 + 181584905 CCAGTCCTGTGACCTGTGCCCCG-GTTCAGGATACTA----------CAGGCTACTACAATTATTCTCATTATTTCATGGGGTTATTCCAGCTTTTCAGGTTCTTCAGTGCCTCATTCCAAGAATGCTAACATTTTTCATCCTCGTAGTTCCTAGGATTGTCTCTGAATTTTCACCCAGTTGCCTACCAAGATGTTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 42723 193 + 100774 CCAgtcctgtgtcctgtgtcctgtgtcctgtgtcctgtgccctgGTTCAGGATACTACAATTATTCTCATTATTTCGTGGGGTTTTTCCAGCTTTTCAGGTTCTTCAGTGCCTCATTCCACTAATGCT----CTTTTCATCCTCGTAGCTCCAAGCGTTGTCTCTGAATTTTCACTAATTTGCCTGCCaagatgttg i macNem1.NW_012013899v1 C 0 I 3877 s cerAty1.NW_012009470v1 558389 186 - 16742782 CCAGTCCTGTGACCTGTGCCCCG-GTTCAGGATACTA----------CAGGCTACTACAATTATTCTCATTATTTCATGGGGTTATTCCAGCTTTTCAGGTTCTTCAGTGCCTCATTCCAAGAATGCTAACATTTTTCATCCTCGTAGTTCCTAGGGTTGTCTCTGAATTTTCACCCAGTTGCCTACCAAGATGTTG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1478873 186 + 91010382 CCAGTCCTGTGACCTGTGCCCCG-GTTCAGGATACTA----------CAGGCTGCTACAATTATTCTCATTATTTCATGGAGTTATTCCAGCTTTTCAGGTTCTTCAGTGCCCCATTCCATGAATGCTAACTTTTTTCATCCTCGTAGTTCCTAGGGTTGTCTCTGAATTTTCACCCAGTTGCCTACCAAGATGTTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 72147 186 - 6207128 CCAGTCCTGTGACCTGTGCCCCG-GTTCAGGATGCTA----------CAGACTACTACAATTATTCTCATTATTTCATGGGGTTATTCCAGCTTTTCAGGTTCTTCAGTGCCTCATTCCATGAATGCTAACTTTTTTCATCCCCGTAGTTCCTAGGGTTGTCTCTGAATTTTCACCCAGTTGCCTACCAAGATGTTG i manLeu1.NW_012109696v1 I 14 C 0 s colAng1.NW_012118799v1 476272 172 - 514179 CCAGTCCTGTGTCCTGTGCCCTG-GTT--------------------CAGGCTACTACAATTATTCTCATTATTTCGTGGGGTTTTTCCAGCTTTTCAGGTGCTTCAGTGCTTCCTTCCATGAATGCT----CTTTTCATCCTCGTAGTTCCAAGGGTTGTCtctgaattttcactaatttgcctaccaagatgttg i colAng1.NW_012118799v1 C 0 I 3274 s calJac3.chr2 204136390 176 + 204313951 TCAGTCCCGTGTCCTGTGTCCCT-GTT--------------------CAGGATACTACAATTATTGTCATTATTTCATAGCGTTATTCCAGTTTTTTATGTTCTTCAGTGCCTCCTTCCATGAACGctaacttttttcatcctcagagttcctaaggttttctctgaattttcacccagttgcccacccagatgttg i calJac3.chr2 C 0 I 5724 s saiBol1.JH378155 16278957 171 + 16417988 TCAGTCCTGTGTCCTGTGTCCCA-GTT--------------------CAGGATACTGCAATTATT----CTATTTCATAGCGTTATTCTAGTATTTTATGTTCTTCAGTGCCTCCTTCCATGAACGCT-Acttttttaatcctcagagttcctaaggttttctctgaattttcacccagttgcctacccagatgttg i saiBol1.JH378155 C 0 I 5247 e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=8022.000000 s hg38.chr3_KI270934v1_alt 159241 4 + 163458 TCTG s panTro5.chr3 202079964 4 + 202621043 TCTG i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2923206 4 - 123690457 TCTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1623431 4 + 181584905 TCTG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 558575 4 - 16742782 TCTG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1479059 4 + 91010382 TCTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 72333 4 - 6207128 TCTG i manLeu1.NW_012109696v1 C 0 C 0 e macNem1.NW_012013899v1 42916 3877 + 100774 I e saiBol1.JH378155 16279128 5247 + 16417988 I e calJac3.chr2 204136566 5724 + 204313951 I e colAng1.NW_012118799v1 476444 3274 - 514179 I e rheMac8.chr6 179816997 3554 - 180051392 I e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=30736.000000 s hg38.chr3_KI270934v1_alt 159245 13 + 163458 TGTCTAATGCAGG s panTro5.chr3 202079968 13 + 202621043 TGTCTAATGCAGG i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2923210 13 - 123690457 TGTCTACTGCAGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1623435 13 + 181584905 TGTCTACTGCAGG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 558579 13 - 16742782 TGTCTACTGCAGG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1479063 13 + 91010382 TGTCTACTGCAGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 72337 13 - 6207128 TGTCTACTGCAGG i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 479718 13 - 514179 TGTCTACTGCACG i colAng1.NW_012118799v1 I 3274 C 0 e macNem1.NW_012013899v1 42916 3877 + 100774 I e saiBol1.JH378155 16279128 5247 + 16417988 I e calJac3.chr2 204136566 5724 + 204313951 I e rheMac8.chr6 179816997 3554 - 180051392 I e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=9159.000000 s hg38.chr3_KI270934v1_alt 159258 5 + 163458 GGATG- s panTro5.chr3 202079981 6 + 202621043 GGATGC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2923223 4 - 123690457 GG-CG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179820551 5 - 180051392 GGATG- i rheMac8.chr6 I 3554 C 0 s macFas5.chr6 1623448 5 + 181584905 GGACG- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 46793 5 + 100774 GGATG- i macNem1.NW_012013899v1 I 3877 C 0 s cerAty1.NW_012009470v1 558592 5 - 16742782 GAACG- i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1479076 5 + 91010382 GGACG- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 72350 5 - 6207128 GGACG- i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 479731 5 - 514179 GGACG- i colAng1.NW_012118799v1 C 0 C 0 e saiBol1.JH378155 16279128 5247 + 16417988 I e calJac3.chr2 204136566 5724 + 204313951 I e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=487845.000000 s hg38.chr3_KI270934v1_alt 159263 99 + 163458 GTGCAGGTCTGAATATCTTACTCACAGCTCACCTTTTTGGTGCCTTTGATCCGTGTTAGGAATTATCCACATCTTCTCTCTGGGCAGTATTCTACTTTC s panTro5.chr3 202079987 94 + 202621043 GTGCAGGTCTGAATATCTTA--CACAGCTCACCTTTTT-GTGCCTTTGATCCGTGTTA-GAATTATCCACATCTTCTCTCT-GGCAGTATTCTACTTTC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2923227 95 - 123690457 GTGCAGGTCTGAATATCTTACTCACAGCTCACCTTTTTGGTGCCTTTGAACCGTGTTAGGAATTACCCACATCTTCTCTCTGGGCAATATTCTA----C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179820556 99 - 180051392 GTGCGGGTCTGAATATCTTAAACACAGCTCACCTTTTTGGTGCCTTTGATCCGTGTTAGCAATTACCCACATCTTCTCTCTGGGCAATATTCTACTTTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1623453 96 + 181584905 GTGCAGGTCTGAGTATCTTACACACAGCTCACCTTTTTGGTGCCTTTGATCCATGTTAGGAATTATCCACA---TGTCTCTGGGCAATATTCTACTTTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 46798 99 + 100774 GTGCGGGTCTGAATATCTTAAACACAGCTCACCTTTTTGGTGCCTTTGATCCGTGTTAGCAATTACCCACATCTTCTCTCTGGGCAATATTCTACTTTC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 558597 96 - 16742782 GTGCAGGTCTGAATATCTTACACACAGCTCACCTTTTTGGTGCCTTTGATCCATGTTAGGAATTATCCACA---TGTCTCTGGGCAATATTCTACTTTC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1479081 96 + 91010382 GTGCGGGTCTGAATATCTTACACACAGCTCACCTTTTTGGTGCCTTTGATCCGTGTTAGGAATTATCCACA---TGTCTCTGGGCAATATTCTACTTTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 72355 96 - 6207128 GTGCAGGTCTGAGTATCTTACACACAGCTCACCTTTTTGGTGCCTTTGATCCATGTTAGGAATTATCCACA---TGTCTCTGGGCAATATTCTACTTTC i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 479736 99 - 514179 GTGCAGGTCTGAATATCTTACACACAGCTCACCTTTTTGGTGCCTTCGATCCGTGTTAGGAATTATCCACATCTTCTCTGTGGGCAATATTCTACTTTC i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204142290 99 + 204313951 GTGCAGGTCTGAGTATCTCAGACACAGCTCACCTTTTTCCTGCCTTTGATCCGTGTTAGGAATTATCCACGCCTTCTCTCCGGGCAACATTCTACGTTC i calJac3.chr2 I 5724 C 0 s saiBol1.JH378155 16284375 99 + 16417988 GTGCAGGTCTGAGTATCTCAGACCCAGCTCACCTTTTTCCTGCCTTTGATCCATGTTAGGAATTATCCACGCCTTCTCTCTAGGCAACATTCTACCTTC i saiBol1.JH378155 I 5247 I 142 e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=1685735.000000 s hg38.chr3_KI270934v1_alt 159362 326 + 163458 TTTTTATATTGACCCAATTATTTTACTTCTTTGGTGTGTCCTTTCTCCTAACACATACGGGTTCACTTTGAAACCTTGAAACCCACATTTACAAAAACATTTTCAATATGAAACATTGTTCCATGACTC----ATTACTGGAGTACCATCAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTGGTCTCAGTACTCATGAAAACGGTCTGAAGGTTTGTTTTGGGTTCCTAAGT----AGTAGACACACGCACA---ACACTGCCTGTCAGTTATTTCTTGGAAACTAAATCAGCCCTTCTGTTGC-CAT-CCTATCATGCTTCAGGGG s panTro5.chr3 202080081 324 + 202621043 TTTTTATATTGACCAATTTATTTTACTGCTTTGGTGTGTCTTTTCTCCTAACACATATGGGTTCAC-TTGAAACCCTGAAACCCACATTTACAAAAACATTTTCAATATGAAACA-TGTTCCATGACTC----TTTACTGGAGCACCATCAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTGGTCTCAGTACTTATGAAAACGGTCTGAAGGTTTG-TTTGTGTTCCTAAGC----GGTAGACACGCGCACA---ACACTGCCTGTCAGTTATTTCTCGGAAACTAAATCAGCCCTTCTGTTGC-CACACCTATCATGCTTCAGGGG i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2923322 325 - 123690457 TTTTTATATTGACCCAATTATTTTACTTCTTTGGTGTGTCCTTTCTCCTAACACATACGGGTTCACTTTGAAACCTTGAAACTCACATTTAC-AAAACATTTTCAATATGAAGCATCGTTCCATGACTC----ATTAGTGGAGTTCCATCAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTGGTCTCAGTACTCATGAAAACGGTCTGAAGGTTTATTTTGGGTTCCTAAGT----AGTAGACACACACACA---ACACTGCCTGTCAGTTATTTCTCGGAAACTAAATCAGCCCTCCTGTTGC-CAT-CCTATCATGCTTCAGGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179820655 328 - 180051392 ATTTTATATTGACCCAATTATTTTACTTCTTTGGTGTGTCCTTTCTTCTAACACATATGGGTTCACTTTGAAACCTTGAAACCCACATTTAC-AAAATATTTTTGGTATGAAACATGGTTCCATGACTC----ATTAGTGGAGTACCATAAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTGGTCTCAGTACTCATGAAAACGGTCTGAAGGTTTGTTTTGGGTTCCTAAGCAGTAAGTAGACACACACACA---ACACTGCCTGTCAGCTATTTCTTGGAAACTAAATCAGC-CTTCTGTTGC-CAT-CCTATCATGCTTCAGGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1623549 324 + 181584905 TTTTTACATAGACCCAATTATTTTACTTCTTTGGTGTGTCCTTTCTCCTAACACATATGGGTTCACTTTGAAACCTTGAAACGCACATTTAC-AAAACATTTTTGGTATGAAACATGGTTCCATGACTC----ATTAGTGGAGTACCATAAACATTTACATTTCCAGACCACCCACTTCCCAGTGGTTTTCTTGGTCTCAGTACTCATGAAAACGGTCTGAAGGTTTGTTTTGGGTTCCTAAGC----AGTAGACACACACACA---ACACTGCCTGTCAGCTATTTCTTGGAAACTAAATCAGC-CTTCTGTTGC-CAT-CCTATCATGCTTCAGGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 46897 324 + 100774 ATTTTATATTGACCCAATTATTTTACTTCTTTGGTGTGTCCTTTCTCCTAACACATATGGGTTCACTTTGAAACCTTGAAACCCACATTTAC-AAAATATTTTCGGTATGAAACATGGCTCCATGACTC----ATTAGTGGAGTACCATAAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTGGTCTCAGTACTCATGAAAACGGTCTGAAGGTTTGTTTTGGGTTCCTAAGC----AGTAGACACACACACA---ACACTGCCTGTCAGCTATTTCTTGGAAACTAAATCAGC-CTTCTGTTGC-CAT-CCTATCATGCTTCAGGGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 558693 324 - 16742782 TTTTTATATTGACCCAATTATTTTACTTCTTTGGCATGTCCTTTCTCCTAACACATATGGGTTCACTTTGAAACCTTGAAGCCCACATTTAC-AAAACATTTTCGGTATGAAACATGGTTCCATGACTC----ATTAGTGGAGTACCATAAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTCGTCTCAGTACTCATGAAAACGGTCTGAAGGTTTGTTTTGGGTTCCTAAGC----AGTAGACACACACACA---ACACTGCCTGTCAGCTATTTCTCGGAAACTAAATCAGC-CTTCTGTTGC-CAT-CCTATCATGCTTCAGGGG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1479177 324 + 91010382 TTTTTATATTGACCCAATTATTTTACTTCTTTGGTGTGTCCTTTCTCCTAACACATATGGGTTCACTTTGAAACCTTGAAGCCCACATTTAC-AAAACGTTTTCGGTATGAAACATGGTTCCACGACTC----ATGAGTGGAGTACCATAAACATCTCCATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTGGTCTCAGTACTCATGAAAACGGTCTGAAGGTTTGTTCTGGGTTCCTAAGC----AGTAGACACACACACA---ACACTGCCTGTCAGCTATTTCTCGGAAAGTAAATCAGC-CTTCTGTTGC-CAT-CCTATCATGCTTCAGGGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 72451 324 - 6207128 TTTTTACATTGACCCAATTATTTTACTTTTTTGGTGTGTCCTTTCTCCTAACACATATGGGTTCACTTTGAAACCTTGAAACCCACATTTAC-AAAACATTTTCGGTATGAAACATGGTTCCATGACTC----ATTAGTGGAGTACCATAAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTGGTCTCAGTACTCATGAAAATGGTCTGAAGGTTTGTTTTGGGTTCCTAAGC----AGTAGACACACACACA---ACACTGCCTGTCAGCTATTTCTTGGAAACTAAATCAGC-CTTCTGTTGC-CAT-CCTATCATGCTTCAGGGG i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 479835 325 - 514179 ATTTTATATTGACCCAACTATTTTACTTCTTTGGTATGTCCTTTCTCCTAACACATATGGGTTCGCTTTGAAACCTTGAAACCCACATTTAC-AAAACATTTTCAGTATGAAACATGGTTCCATGACTC----ATTAGTGGAGAACCATAAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTGGTCTCAGTACTCATGAAAACAGTCTGAAGGTTTGTTTTGGGTTCCTAAGC----AGTAGACACACACACA---ACACTGCCTGTCAGCTGTTTCTTGGAAACTAAATCAGCTCTTCTGTTGC-CGT-CCTATCATGCTTCAGGGG i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204142389 317 + 204313951 TTTTTATATTGACCCAATGATTTTACTTCTTTGGTTTGTCCTTTCTCTGAACAAGCATGGGTTCATTTTGAAACCTTGAAACCCACATTTAC-AAAACATTTTCAATATGAAACATCGTTCTATGACTCAGTAATTAGTGGAGCACTATAAAAATTTAC-TTTTCAGACCACCCACTGCCCAGTGGCTTCCTTGGTCTCAGTACTCATGAGAACTGTCTGAGGGTTTGTTTCTGATTCCT---T----AGTAGACATACACACAAGGAAGCTGCCCAGCAGTTATTC-----------GATTGGCCCTTCCGTTGC-CAC-CCTATCATACTTCAGGGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16284616 330 + 16417988 TTTTTATATTGACCCAATTATTTTACTTCTTTGGTTTGTCCTTTCTCCTAGCAAGTATGAGTTCATTTTGAAACCTTGAAACCCACATTTAC-AAAACATTTTCAATATGAAACATCATTCCATGACTCAGTAATTAGTGGAGTACTATAAAAATTTACATTTTCAGACCACCCACTGCCCAATGGTTTTCTTGGTCTCAGTACTCATGAAAACTGTCTGAAGATTTGTTTCTGGTTCCT---T----AGTAGACATACACACAAGGAAGCTGCCCAGCAGTTATTTCTTGGAAATGAAATTGGCCCTTCCGTTGCGCAT-CCTATCATGCTTCAGGGG i saiBol1.JH378155 I 142 I 305 e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=62282.000000 s hg38.chr3_KI270934v1_alt 159688 10 + 163458 TGCCTGTGCT s panTro5.chr3 202080405 10 + 202621043 TGCCTGTGCT i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2923647 10 - 123690457 TGCCTGTGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179820983 10 - 180051392 TGCCTGTGCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1623873 10 + 181584905 TGCCTGTGCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 47221 10 + 100774 TGCCTGTGCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 559017 10 - 16742782 TGCCTGTGCT i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1479501 10 + 91010382 TGCCTGTGCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 72775 10 - 6207128 TGCCTGTGCT i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 480160 10 - 514179 TGCCTGTGCT i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204142706 10 + 204313951 TGCCTGTGCT i calJac3.chr2 C 0 I 294 s saiBol1.JH378155 16285251 10 + 16417988 TGCCTGTGCT i saiBol1.JH378155 I 305 C 0 e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=1119635.000000 s hg38.chr3_KI270934v1_alt 159698 234 + 163458 AG-TTTTTAATTCTTTGTTCTAACACTTAAATGTTTGCTCAAACGCCCATATTAATACTTCCTCTTAGTTTACAAAA-------GGATTTACTTTCTTACTGGTTGGGATGAAGCTGCCTGAGGTTGCCA-----------CCTGTTATTTTTCCTTCATTTATTGGACCATGTCATCCCATTACATGTCAGCCGTGGAGGTTTTCAAACTGTGGTCcctggacatgttaaaaatgcaaattctcaggccgaa s panTro5.chr3 202080415 232 + 202621043 AGTTTTTTAATTCTTTGTTCTAACACTTAAATGTTTGCTCAAACGCCCATATTAATACTTCCTCTGAGTATCCAAAA-------GGATTTACTTTCTTACTGGTTGGGATGAA-CTGCCTGAGGTTCCCA-----------CCTGTTACTTTT-CTTCATTTATTGGACCATGTCATTCCATTACATGTCA-CCGTGGAGGTTTTCAAACTGTGGTCcctggacatgttagaaatgcaaattctcaggccgaa i panTro5.chr3 C 0 I 570 s nomLeu3.chr11 2923657 232 - 123690457 AG-TTTTTAATTCTTTGTCCTAACAC--AAATATTTGCTCAAACGCCTGTATTAATACTTCCTCTTAGTTTACAAAA-------GGATTTACTTTCTTACTGGTTGGGATGAAGCTGCCTGAGGTTGCCA-----------CCTGTTATTTTTCCTTCATTTATTGGACCATGTCATCCCATTACATGTCTGCCATGGAGGTTTTCAAGCTGTGGTCcctggacatgttagaaatgcaaattctcaggccgaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179820993 219 - 180051392 AG-TTTTTAATTATTTGTCCTGACACTTAAATGTCTGCTC-AACGTCCATATTAATACTTCCTCTTAGTTTACAAAA-------GGATTTACTTTCTTACTGGTTGGGATGAAGCTGTCTGAGGTTGCCA-----------CCTGTTATTATTCCTTCATTTATTGGACCATGTC-TGCCAT-------------TGGAGGTTTTCAAACTGTGGTCcctggacatgttagaaatgcaaattctcaggccgaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1623883 220 + 181584905 AG-TTTTTAATTCTTTGTCCCGACACTTAAATGTCTGCTCAAACGTCCATATTAATACTTCCTCTTAGTTTACAAAA-------GGATTTACTTTCTTACTGGTTGGGATGAAGCTGTCTGAGGTTGCCA-----------CCTGTTATTATTCCTTCATTTATTGGACCATGTC-TGCCAT-------------TGGAGGTTTTCAAACTGTGGTCcctggacatgttagaaatgcaaattctcaggccgaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 47231 220 + 100774 AG-TTTTTAATTCTTTGTCCCGACACTTAAATGTCTGCTCAAACGTCCATATTAATACTTCCTCTTAGTTTACAAAA-------GGATTTACTTTCTTACTGGTTGGGATGAAGCTGTCTGAGGTTGCCA-----------CCTGTTATTATTCCTTCATTTATTGGACCATGTC-TGCCAT-------------TGGAGGTTTTCAAACTGTGGTCcctggacatgttagaaatgcaaattctcaggccgaa i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 559027 220 - 16742782 AG-TTTTTAATTCTTTGTCCTGACACTTAAATGTCTGCTCAAACGTCCGTATTAATACTTCCTCTTAGTTTACAAAA-------GGATTTACTTTCTTACTGGTTGGGATGAAGCTGTCTGAGGTTGCCA-----------CCTGTTATTATTCCTTCATTTATTAGACCATGTC-TGCCAT-------------TGGAGGTTTTCAAACTGTGGTCcctggacatgttagaaatgcaaattctcaggccgaa i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1479511 220 + 91010382 AG-TTTTTAATTCTTTGTCCTGACACTTAAATGTCTGCTCAAACGTCCATATTAATACTTCCTCTTAGTTTACAAAA-------GGATTTACTTTCTTACTGGTTGGGAGGAAGCTGTCTGAGGTTGCCA-----------CCTGTTATTATTCCTTCATTTATTGGACCATGTC-TGCCAT-------------TGGAGGTTTTCAAACTGTGGTCcctggacatgttagaaatgcaaattctcaggccgaa i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 72785 220 - 6207128 AG-TTTTTAATTCTTTGTCCTGACACTTAAATGTCTGCTCAAACGTCCATATTAATACTTCCTCTTAGTTTACAAAA-------GGATTTACTTTCTTACTGGTTGGGATGAAGCTGTCTGAGGTTGCCA-----------CCTGTTATTATTCCTTCATTTATTGGACCATGTC-TGCCAT-------------TGGAggttttcaaactgtggtccctggacatgttagaaatgcaaattctcaggctgaa i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 480170 216 - 514179 AG-TTT----TTCTTTGTCCTAACACTTAAATGTCTGCTCAAACGTCCATATTAATACTTCCTCTTAGTTTACAAAA-------GCATTTACTTTCTTACTGCTTGGGATGAAGCTGTCTGAGGTTGCCA-----------CCTGTTATTTTTCCTTCACTTATTGGACCATGTC-TGCCAT-------------TGGAggttttcaaactgtggtccccggacatgttagaaatgcaaattctcaggctgaa i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204143010 251 + 204313951 AG-CTTTTAATTCTTTGTCCTAACACTTAAATGTTTGCTCAAACACCCGTGTTAATAC-TACTCTTAGTTTTCAGAAGGCTTGGGGATTTACTTTCTTACTGGCTGGGATGAAGCTTCCTGAGGTTGCCAGGGGGTCTCCACCTGTTGTTGTTCCCCCGTTTATCGGACCGTGTCATCCCATTACATGTCTGCCACAGAGGTTTCCAAACTGTGGTCcctgggcatgttagaaatgccaattctcaggcctaa i calJac3.chr2 I 294 C 0 s saiBol1.JH378155 16285261 247 + 16417988 AG-TTTTTAATTCTTTGTCCTAACACTTAAATGTTTGCTCAAACACCTGTGTTAACAC-TATTCTTAGTTTACAGAAGGCTTGGGGATTTACTTTCTTACTGGCTGGGATGAAGCTGCCTGAGGTTGCCA-GGAGTCTCCACC---TGTTTTTCCTTCGTTTATTGGACCGTGTTATCCTCTTACATGTCTGCCATGGAGATTTTCAAACTGTGGTCcctgggcatgttagaaatgccaattctcaggcctaa i saiBol1.JH378155 C 0 C 0 e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=111370.000000 s hg38.chr3_KI270934v1_alt 159932 25 + 163458 ccaggactgaattggaagatctggg s panTro5.chr3 202081217 25 + 202621043 CCAGGACTGAATCAGAAGATAATGG i panTro5.chr3 I 570 C 0 s nomLeu3.chr11 2923889 25 - 123690457 ccaggactgaataggaagatctggg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179821212 25 - 180051392 tcaggactgaatcagaagatctggg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1624103 25 + 181584905 tcaggactgaatcagaagatctggg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 47451 25 + 100774 tcaggactgaatcagaagatctggg i macNem1.NW_012013899v1 C 0 N 0 s cerAty1.NW_012009470v1 559247 25 - 16742782 tcaggactgaatcagaagatctggg i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1479731 25 + 91010382 tcaggactgaatcagaagatctggg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 73005 25 - 6207128 cctggactgaatcggaaggtctggg i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 480386 25 - 514179 ccaggactgaatcggaaggcccggg i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204143261 23 + 204313951 ccaggactg-at-ggaagttctggg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 16285508 24 + 16417988 ccaggactgaat-ggaagttctggg i saiBol1.JH378155 C 0 C 0 e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=59200.000000 s hg38.chr3_KI270934v1_alt 159957 14 + 163458 gtagggtccCCCCA s panTro5.chr3 202081242 14 + 202621043 GTGGGGTCCCCCCA i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2923914 14 - 123690457 gtagggtccCCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179821237 14 - 180051392 gtagggtccCCCGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1624128 14 + 181584905 gtagggtccCCCCA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 559272 14 - 16742782 gtagggtccCCCCA i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1479756 14 + 91010382 gtagggtccCCCCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 73030 13 - 6207128 gt-gggtcccccca i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 480411 14 - 514179 gtggggtccCCCGA i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 204143284 14 + 204313951 gtagggtccCTCCA i calJac3.chr2 C 0 N 0 s saiBol1.JH378155 16285532 14 + 16417988 gtagggtccctgca i saiBol1.JH378155 C 0 C 0 e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=9000.000000 s hg38.chr3_KI270934v1_alt 159971 2 + 163458 GG s panTro5.chr3 202081256 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2923928 2 - 123690457 GG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179821251 2 - 180051392 GG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1624142 2 + 181584905 GG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 559286 2 - 16742782 GG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1479770 2 + 91010382 GG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 73043 2 - 6207128 gg i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 480425 2 - 514179 GG i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 16285546 2 + 16417988 GG i saiBol1.JH378155 C 0 N 0 e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=40801.000000 s hg38.chr3_KI270934v1_alt 159973 13 + 163458 ACTGAATCAGAAG s panTro5.chr3 202081258 13 + 202621043 ACTGAATCAGAAG i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2923930 13 - 123690457 ACTGAATCAGAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179821253 13 - 180051392 ACTGAATCGGAAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1624144 13 + 181584905 ACTGAATCGGAAG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 559288 13 - 16742782 ACTGAATCGGAAG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1479772 13 + 91010382 ACTGAATCGGAAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 73045 13 - 6207128 actgaatcggaag i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 480427 13 - 514179 ACTGAATCTGAAG i colAng1.NW_012118799v1 C 0 N 0 e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=3356.000000 s hg38.chr3_KI270934v1_alt 159986 2 + 163458 AT s panTro5.chr3 202081271 2 + 202621043 AT i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 2923943 2 - 123690457 AT i nomLeu3.chr11 C 0 I 8217 s rheMac8.chr6 179821266 2 - 180051392 GT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1624157 2 + 181584905 GT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 559301 2 - 16742782 GT i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1479785 2 + 91010382 GT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 73058 2 - 6207128 gt i manLeu1.NW_012109696v1 C 0 C 0 e gorGor5.CYUI01015777v1 799614 3677 + 837792 I a score=14076.000000 s hg38.chr3_KI270934v1_alt 159988 4 + 163458 CTGG s panTro5.chr3 202081273 4 + 202621043 CTGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 803291 4 + 837792 CTGG i gorGor5.CYUI01015777v1 I 3677 C 0 s nomLeu3.chr11 2932162 4 - 123690457 CTGG i nomLeu3.chr11 I 8217 C 0 s rheMac8.chr6 179821268 4 - 180051392 CTGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 1624159 4 + 181584905 CTGG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 559303 4 - 16742782 CTGG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 1479787 4 + 91010382 CTGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 73060 4 - 6207128 ctgg i manLeu1.NW_012109696v1 C 0 N 0 a score=2800.000000 s hg38.chr3_KI270934v1_alt 159992 1 + 163458 G s panTro5.chr3 202081277 1 + 202621043 G i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 803295 1 + 837792 G i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2932166 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 179821272 1 - 180051392 G i rheMac8.chr6 C 0 N 0 s macFas5.chr6 1624163 1 + 181584905 G i macFas5.chr6 C 0 N 0 s cerAty1.NW_012009470v1 559307 1 - 16742782 G i cerAty1.NW_012009470v1 C 0 N 0 s chlSab2.chr4 1479791 1 + 91010382 G i chlSab2.chr4 C 0 N 0 a score=21764.000000 s hg38.chr3_KI270934v1_alt 159993 41 + 163458 AGGGTCTGGTGCTGTGCACCCCGACATTCCCTCACTACCCC s panTro5.chr3 202081278 41 + 202621043 AGGGTCTGGTGCTGTGCACCCCGACATTCCCTCACTACCCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 803296 41 + 837792 AGGGTCTGGCGCTGTGCACCCCGACATCCCCTCACTACCCC i gorGor5.CYUI01015777v1 C 0 I 203 s nomLeu3.chr11 2932167 41 - 123690457 AGGGTCTGGCGCTCTGCACCCTGACATCCCCTCACTACCCC i nomLeu3.chr11 C 0 C 0 a score=46309.000000 s hg38.chr3_KI270934v1_alt 160034 96 + 163458 ACTGCCTCTCCCTGCCCTGTGGTCACCACAGCAGCCGCCTCTGCAACCTTGACTATCAGCATGCAGGTCCCAGGACTCGGGGGTCTCCTAACCCGT s panTro5.chr3 202081319 96 + 202621043 ACTGCCTCTCCCTGCCCTGTGGTCACCACAGCAGCCGCCTCTGCAACCTTGACCATCAGCATGCAGGTCCCAGGGCTTGGGGGTCTCCCAACCCAG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 803540 96 + 837792 ACCGCCTCTCCCTGTCCTGTGGTCACCACAGCAGCCGCCTCTGCAACCTTGACCATCAGCATGCAGGTCCCAGGGCTCAGGGGTCTCCCAACCCGT i gorGor5.CYUI01015777v1 I 203 I 701 s nomLeu3.chr11 2932208 87 - 123690457 ACCTCCTCTCCCTGCCCTGTGGTCGCCACAGCA---------GCAACCTTGACCATCAGCATGCAGGTCCCAGGGCTCGGGGGTCTCCCAACCCGT i nomLeu3.chr11 C 0 C 0 a score=16183.000000 s hg38.chr3_KI270934v1_alt 160130 35 + 163458 GCACCCCGACATCCCCCTCACTACCCCACCGCCTC s panTro5.chr3 202081415 34 + 202621043 GCACCCCGACAT-CCCTTCACTATCCCACCACCTC i panTro5.chr3 C 0 I 264 s gorGor5.CYUI01015777v1 804337 34 + 837792 GCACCCCAACAT-CCCCTCACTACCCCACCGCCTC i gorGor5.CYUI01015777v1 I 701 C 0 s nomLeu3.chr11 2932295 34 - 123690457 GCACGCCAACAT-CCCCTCACTACCCCACCGCCTC i nomLeu3.chr11 C 0 C 0 a score=2346.000000 s hg38.chr3_KI270934v1_alt 160165 8 + 163458 TCCCTGGC s gorGor5.CYUI01015777v1 804371 8 + 837792 TCCCTGGC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2932329 8 - 123690457 TCCCTGGC i nomLeu3.chr11 C 0 C 0 e panTro5.chr3 202081449 264 + 202621043 I a score=354327.000000 s hg38.chr3_KI270934v1_alt 160173 876 + 163458 TCTGCCTCTGCGTGGCTCCTCTC-CTGCTGCCCCCAGAAGGTTTTTGTAAAGCCCGACTCAGGGCGTGCATGGCCTCTCCCTCTCCC------------------ACACATGGG-CTCCCCGTCCCCTCCAGCTCA-GCAAACACACAGCACATCCAGGAGCCACGTGGGACCGC----AGTGTCCCA-TGGCCGGTCCCCCAGATCCCTTGGATGTCTCACTCTGGTGAGCCCCTCGCTCCAGTGCCCTCCAGGAAGCCCCCGTCTCCCCATACA--GAAGGGATCTCTTCCCTCCTGAGCCATCGGTGCC--CGACCCTCCCTCTCCTCTGTCGCCCCATTTGT-GGCAGG--TC--AGCCACACCCGTGAGCCCCGGAGCTCTGTGAAGGCCGTCACGGCTCCTTATGACGG-CGCCCAAACAGTGCAGGCAGCCGGAAGCTG-TTCCCTGATGAAAGAAAGGAAGAGGAAAGGAGGAGGGAGGGAAGAAGGCCTTTTCTTGTCC-CGAGAGACTTCT-GTAGGAA-TTTTTGGGTGATACTGAGCATG-GTA-GACCCAGGTCATCTTTCCACGAGAGGGGCCAGAGTACCGCAGGCTCAGCCGCGGTCAGGGGCTCAGGGCGCCGGGGAAGCATTCG-CGTGGGCTGCCCCCACGGGCCGCCTTTGCCACCAAGACCCACTCTTCCAGCCAGGCCTTGGGCCGGCCCTGCTTTCCC-TTCGGACAAGGTCTTCAGTCCACCGAGAGGATGGCCCACCTCCTGCCCCTGGGTCAGTGCGCAGCCCCA-GGGAGGAGCTGTGTGAACCTGG--GAGGTGCTGGGGAGCAAGGGTGCTCCACCAAGGGAGGCAGGAGGCC-GGAGAC-CAGCCCGGCCCAGGAGGAGCCTGGCCAGGAGTCCCACCAAAGCCACTGGACCCGG s panTro5.chr3 202081713 863 + 202621043 TCTGCCTCTGC-TGGCTCCTCTCACTGCTGCCGCCAGAAG-TTTTTGTAAAGCCCGACTCAGGGCGTGCATGGCCTCGTCCCTTCCC------------------ACACATGGGCCTCCCCGTCCC--TCAGCTCAGGCAAACACACAGCGCAT-CAGGAG-CACGTGGGA-CGCAACAAGTGTCCCAGTGGCCGGTCCCCCAG-TCCC-TGGATGTCTCACCCT-GTGAACCCCTCGCTCCAGCGCCCTCCA-GAAG-CCCCGTCT-TCCATACCATGAAGGGATCTCTTCCCT-CTGACGCATC-GTGCCCGCGACCCTCCCTCTCCTCTGTCGCCCCATTTGT-GGCAGGGATCCAAGCCAAA---GTGAGCCC--GTACTCTGT-AAGGCCGTCACGGCT-CTTATGACGGCCGCCCAAACAGTGGCAGCGGCC-GAAGCTGTTTCCCTGATGAAAGAAAGGAAGAGG-AAGGAGGA-GGAGGGAA-AAGGCTCTTTCTTGTCCGCGAGAGACTTCTCGTAGGAAGTTTTTGGGTGATACTGAGCATGAGTAGGACCCAGGTCATCCTTTCCCATGA-AGGCCAG-GTACCGCA-ACTCAGCCGCGGATCAGGGCTCAGGGCGCCGGGAAGGCATTCGCCGTGG--TCCCCC----GGCCGCCTTTGCCACCAAGACCCACTCCTTCACCCAGGCCTTGGGCCAGCCTGGCTTTCCCGTTCG--CAAGGTCTTCAGTCCACGGAGAGGATTGGCCACCTCTTG-CCCTGGGTCAG-GCGCAGCGCCGCAGGAGGAGATGTGTGAACTGGGCAGGGGTGCTGGGAAGCAAGGGTGCTCC-TCAAGGGAGGCAGGAGGCCTGGAGACTCAGCCCAG-CCAGGAGGAGCCTGGCCAGGAGT-CCACCAAA-CAACTGGACCCGG i panTro5.chr3 I 264 I 133 s gorGor5.CYUI01015777v1 804379 885 + 837792 TCTGCCTCTGTGTGGCTCCTCTC-CTACTGCTGCCAGAAGGTTTTTGTAAAGCCGGACTCAGGGCGTGCGTGGCCTCTCCCGCTCCCGCGAG------GCACGTGGCACGTGGG-CTCCCCGTCCCCTCCAGCTCA-GCAAACACACAGAGCATCCAGGAGCCACGTGGGACCAC----AGTGTCCCA-TGGCCGGTCCCCCAGGTCCCTTGGATGTCTCACCCTGGTGAGCCCCTCGCTCCAGCGCCCTCCAGGAAGCCCCCGTCTCCCCATACG--GAAGGGATCTCTTCCCTCCTGAGCCATCGGTGCC--CGACCCTCCCT---CTCTGTCGCCCCATTTGT-GGCAGG--TC--AGCCACACCCGTGAGCCCCGGAGCTCTGTGAAGGCCGTCACGGCTCCTTATGACGG-CGCCCAAACAGTGCAGGTGGCTGGAAGCTG-TTCCCTGATGAAAGAAAGGAAGAGGAGAGGAGGAGGGAGGGAAGAAGGCCTTTTCTTGTCC-CGAGAGACTTCT-GTAGGAA-TTTTTGGGTGATACTGAGCATG-GTA-GACCCAGGTCATCTTTCCATGAGAGGGGCCAGAGTACCGCAGGCTCAGCCACGGTCAGGGGCTCAGGGCGCCGGGGAGGCATTCG-CGTGGGCTGCCCCCACGGGCCGCCTTTGCCACCAAGACCCACTCTTCCAGCCAGGCCTTGGGCCGGCCCTGCTTTCCC-TTCAGACAAGGTCTTCAGTCCACGGAGAGGATGGCCCACCTCCTGCCCCTGGGTCAGTGCGCAGCCCCA-GGGAGGAGCTGTGTGAGCCTGG--GAGGTGCTGGGGAGCAAGGGTGCTCCACCAAGGGAGGCAGGAGGCC-GGAGAC-CAGCCCAGCCCAGGAGGAGCCTGGCCAGGAGTCCCACCAAAGCCACTGGACCCGG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2932337 888 - 123690457 TCTGCCTCTGTGTGTCTCCTCTC-CTACTGCTGCCAGAAGGTTTTTGTAAAGCCGGACTCAGGGCGTGCATGGCCTCTCCCGTTCCCGCGAGGTGCCCGCGTTTGGCACGTGGG-CTCCCCGTCTCCTCCAGCTCA-GCAA--ACACAGCGCGTCCAGGAGCCACGTGGGACCAC----CGTGTCCCA-TGGCTGGTCCCCCAGGTCCT-TGGATGTCTCACCCTGGTGAGCCCCTTGCTCCGGCTCCCTCCAGGAAGCCCCCGTCTCCCCATACA--GAAGGGATCTCTTCCCTCCTGAGCCATCGGTGCC--CGACCCTCCCTCTCCTCTGTCGCCTCATTTGTGGGCAGG--TC--AGCTGCACCCGTGAGCCCTGGAGCTCTGTGAAGGCCGTCACGGCTTCTTATGACAG-TGCCCAAACAGTGCAGGCAGCC-GGAGCTG-TTCCCTGATGAAAGAAAGGAAGAGGAAAGGAGGAGGGAGGGAAGAAGGCCTTTTCTTGTCC-CAAGAGACTTCT-GTAGGAA-TTTCTGGGTGATACTGAGCATG-GTA-GACCCAGGTCATCTTTCCATGAGAGGAGCAA--GCACAGCGGGCTCAGCCGCGGTCAGGGGCTCAGGGAGCCGGG-AAGCATTTG-CGTGGGCTGCCCCCACGAGCCGCCTTTGCCACCAAGACCGGCTCTCCCAGCCAGGCCTTGGGCCAGCCCTGCTTTCCC-TTCGGACAAGGTCTTCAGTCCACGGAGAGGATGGCCCACCTCCTGCCCCTGGGTCAGTGCGCAGCCCCA-GGGAGGAGCTGTGTGAACCTGG--GAGGTGCTGGGGAGCAAGCGTGCTCCATCAAGGAAGGCAGGAGGCC-GGAGAC-CTGCCCAGCCCGGAAGGAGCCTGGTCAGGAGTCCCACCAAAGCCACTAGACCCGG i nomLeu3.chr11 C 0 C 0 a score=435619.000000 s hg38.chr3_KI270934v1_alt 161049 861 + 163458 GGAGCCTCCAGTGACCCAGCCTTGTAGGGTCAGCACTGTCCCTAGGACAGAGTCTGCTTCGTACACAGGTCTCGCTGTCTGTGGAGGCTTCAGGCCCCGATGCCTGGGCA-CACGGACTGACGGCAACCCTCGGGGTGGGAGGCCCCAGATGGGACTTCCTGGCCTGCCCGGGGTGGCGGG-GGGGCGGGTG--GGAGAGGACGGAGCGTCTGTGTGCATGTGTGAGAGCCTCAAGGACGGCATGTCTGTGAAGATGGCTTCACCCAGCCGCGGCTGCCTTCCGTGTGTGGGCAGCGGTGACGGAGCCGTGACCTCACGGGACAG----CCTTTGCCGTGTGGTTTTCCCGCCTCTGGTCCCTTTCCTGGGCTGAGGATCCTGGCTCTGGGGCTCAAGGTGTGGGGTTCGCCAGCACCGGCTCCTGCCATAGACATCCTGGTGGCCCTGGCACAGGCCTGTCCTCCAGCATGGTTCCTAGACCCACCACGCAGGACTCCTAGGCCCCTGAGGGTTGGCAGGAGTGAGGCAGGCAGTCACCAACTGCCCTTGGGTGAGGCTGGTGGCCAGGGGGGGACCCAGCAGGTGCAAGCCAGGCCATCCCCAGCAGCCGCCGGAGCCCATGTCTTTCCCACCGCACAGCACAGCCAGGACATGGGGGTCAGGCCATTACTTACGCTTCTAGTCCTTACATCACCCACAACTTACCCCTGACCTGTGCCTGGCTGTGGTGCCCGCAGCCTGGGCTCCACATAAACACAGGCCAAGAAGTCCCATCTGCAGCCTCCCACCGCAAAGGTTTCCGGCAGTCCGGGCTCCCCAGGCACC------------------------------------------------------------GGCTCTGCAGCCCCCACAGACAGAGAGACCCCTGTGTGAAGT s panTro5.chr3 202082709 867 + 202621043 GGAGCCTCCAGTGACCCAGCCTTGGAGGGTCAGCACTGTCCCTAGGACAGAGTCTGCTTCGCACACAGGTCTCGCTGTCTGTGGAGGCTGCAGGCCCCGATGCCTGGGCA-CACGGACTGACGGCAACCCTCGGGGTGGGAGGCCCCAGATGGGACTTCCTGGCCTGCCCGGGGTGGCCGG-GGGGCGGGTGTGGGAGAGGACGGAGCGTCTGTGTGCATGTGTGAGAGCCTCAAGGACGGCATGTCTGTGAAGATGGCTTCTCCCAGCCGCGGCTGCCTTCCGTGTGTGGGCAGCGGTGACGGAGCCGTGACCTCACGGGACAGACAGCCTTTGCCGTGTGGTTTTCCTGCCTCTGATCCCTTTCCTGGGCTGAGGATCCTGGCTCTGGGGCTCAAGGTGTGGGGTTCGCCAGCACCGGCTCCTGCCATAGACATCCTGGTGGCCCTGGCACAGGCCCGTCCTCCAGCATGGTTCCTAGACCCCCCACGCAGGACCCCTAGGCCCCTGAGGGTTGGCAGGAGTGAGGCAGGCAGTCACCAACTGCCCTTGGGTGAGGCTGGTGGCTGGGGGGGGACCCAGCAGGTGCAAGCCAGGCCATCCCCAGCAGCCGCCGGAGCCCATGTCTTTCCCACCGCACAGCACAGCCAGGACATGGGGGTCAGGCCATTACTTACGCTTCTAGTCCTTACATCACCCATAACTCACCCCTAACCTATGCCTGGCTATGGGGCCCGCAGCCTGGGCTCCACATAAGCACAGGCCAGGAAGTCCCATCTGCAGCCTCCCACCCCAAAGGTTTCCGGCAGTCCGGGCTTCCCAGGCACC------------------------------------------------------------GGCCCTGCAGCCCCCACAGACAGGGAGACCCGTGTGTGAAGT i panTro5.chr3 I 133 C 0 s gorGor5.CYUI01015777v1 805264 917 + 837792 GGAGCCTCCAGTGACCCAGCCTTGGAGGGTCAGCACTGTCCCTAGGACAGAGTCTGCTTCGCACACAGGTCTCGCTGTCTGTGGAGGCTGCAGGCCCCGATGCCTGGGCA-CACGGACTGACGGCAACCCTCGGGGTGGGAGGCCCCAGATGGGACTTCCTGGCCTGCCCGGGGTGGCGGGTGGGGTGGGGGTGGGAGAGGATGGAGCGTCTGTGTGCATGTGTGAGAGCCTCAAGGATGGCATGTCTGTGAAGATGGCTTCTCCCAGCCGCAGCTGCCTTCCGTGTGTGAGCAGCGGTGACGGAGCCGTGACCGCACGGGACAG----CCTTTGCCGTGTGGTTTTCCCGCCTCTGATCCCTTTCCTGGGCTGAGGAGCCTGGCTCTGGGGCTCAGGGTGTGGGGTTCGCCAGCACCAGCTCCTGCCATAGACATCCTGGTGGCCCTGGCACAGGCGCGTCCTCCAGCATGGTTCCTAGACCC-CCACGCAGGACCCCTAGGCCCCTGAGGGTCGGCAGGAGTGAGGCAGGCAGTCACCAACTGCCCTTGGGTGAGGCTGGTGGCC-GGGGGGGACCCAGCAGGTGCAAGCCAGGCCACCCCCAGCAGCCGCCGGAGCCCATGTCTTTCCCACCACACAGCACAGCCAGGACATGGGGGTCAGGCCATTACTTATGCTTCTAGTCCTT-----ACCCACAACTCACCCCTAACCTATGCCTGGCTGTGGTGCCCGCAGCCTGGGCTCCACATAAACACAGGCCAGGAAGTCCCATCTGGAGCCTCCCACCCCAAAGGTTTCCGGCAGTCCGGGCTCCCCAGGCACCGGCCCTGTAGCCCCCACAGACAGAGAGACCCGTGTGTGAAGTCCGGGCTCCTCAGGCACTGGCCCTGCAGCCCCCACAGACAGGGAGACCCGTGTGTGAAGT i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2933225 857 - 123690457 GGAGCCTCCAGTGACCCAGCCTTGGAGGGTCAGCACTGTCCCTAGGATGGATTCTGCTTCGCACACAGGTCTCGCTGTCTGTGGAGGCTGCAGGCCCCGATGCCTGGGCAGCACGGACTGAAGGCAACCCTCAGGGTGGGAGGCCCCAGATGGGACTTCCTGGCCCTCCCGGGGTG------GGGTTGGGGGTGGGAGAGGACGGAGCGTCTGTGCACATGCGTGAGAGCCACAAGGATGGCATGTCTGTGAAGATGGCTTCTCCCAGCCGCGGC-GCCTTCCGTGTGTGGGCAGTGGTGGTGGAGCCAGGACTGCACGGGACAG----CCTTTGCCATGTGGTTTTCCCGCCTCTGATCCC-TTCTTAGGCTGAGGAGCCTGGCTCTGGGGCTCAAGGTGTGGGGTTCGCCAGCACCGGCTCCTGCCATAGACATCCTGGTGGCCCTGGCACAGGCACGTCCTCCAGCATGGTTCCTAGACCCCTCACGCGGGACCCCTAGGCCCCTGAGGGTCAGCAGGAGTGAGGCAGGCCGTCACCAACTGCCCTTGGGTGAGCCTGGTGGCCAGGGGTGGACCCAGCAGGTGCAGGCCAGGCCACCCTCAGCAGCCACCGGAGCCTGTGTCTTTCCCACCACACAGCACAGCCAGGACATGGGGGTCAGGCCATTACTTGTGCTTCTAGTCCCTACATCACCCACAACTCACCCCTAACCTGTGCCTGGCTGTGGCACCTGCAGCCTGGGCTCCACATAAACACAGGCCAGGAAGTCCCATCTGGAGCCTCCCACCCTGAAGGTTTCTGGCAGTCCCGGCTCCCCAGGCACC------------------------------------------------------------AGCCCTACAGCACGCACAGACAGGGAGACCTGTGTGTGAAGT i nomLeu3.chr11 C 0 C 0 a score=5077.000000 s hg38.chr3_KI270934v1_alt 161910 19 + 163458 CCGGGCTCCTCAGGCACTG s panTro5.chr3 202083576 19 + 202621043 CCGGGCTCCCCAGGCACCG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 806181 19 + 837792 CCGGGCTCCTCAGGCACTG i gorGor5.CYUI01015777v1 C 0 C 0 e nomLeu3.chr11 2934082 0 - 123690457 C a score=7224.000000 s hg38.chr3_KI270934v1_alt 161929 14 + 163458 GCCCTGCAGCCCCC s panTro5.chr3 202083595 14 + 202621043 GCCCTGCAGCCCCC i panTro5.chr3 C 0 I 421 s gorGor5.CYUI01015777v1 806200 14 + 837792 GCCCTGCAGCCCCC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120757136 14 + 123690457 GGCCTGCAGCCTCC i nomLeu3.chr11 n 0 C 0 a score=12405.000000 s hg38.chr3_KI270934v1_alt 161943 24 + 163458 ACAGACAGAGAGACCTGTGTGTGA s panTro5.chr3 202084030 24 + 202621043 ACAGACAGAGAGACCCGTGTGTGA i panTro5.chr3 I 421 C 0 s gorGor5.CYUI01015777v1 806214 24 + 837792 ACAGACAGAGAGACCTGTGTGTGA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120757150 24 + 123690457 ACAGACAGCGAGACCTGTGTGCGA i nomLeu3.chr11 C 0 n 0 a score=775762.000000 s hg38.chr3_KI270934v1_alt 161967 1491 + 163458 AGAATCCGTTTGAGGGACAGTGCTGACCCTCCAGGGCTGGGTCAC-GGAGGCTCCAGTGGCTTTGGTGGGACTCCTGGCCAGGCTCCT----------------------CCTGGACTGGGCCTGGGCTGGTCTCCGGCCTCCTGCCTCCCTTGGTGCAGGATCCTTGCTCCCCAGCTTCCCTGGGAAATCCGACGCCTTCTGAT-CCTGCATGCATCCGGCACCCCTGACGCTGGCGGAGTTGCCTTTCTGCGTGTATAGCTCCTAACAGGGCAGCACAGCTGTTCTGAAACCTCACACATCATCACTGGGGTGGCTGAGGCTGGGCCACCTggtgttcacctcctgaccctggaactgtgcagagaacctctcttcaaataggaggcaggtctttgtggctgtgtttaagttaaagatcttgagataaggaggtcattctggattaactcgttggccctacatgcacggcaagtgtccttacacagaggcagagggaggttagacgcagacagaggaggaggtcgcctggagaccgaggcagaggtgcagcattgtggccgcggcccagggacgcctggagccacagaagctggtggaggtggcagggtcctcccctggagcctctggagggagcacggcccatggactc---gatttcagacccctccctgctgagcggggagagaatgagtccctgttgttttgagctgccgagactgtggggatctgccatggcagctccaggaCCCTCAGACCTTCGGCTCAGAGCCCCTCTAGCACTGAGCAAGACGACCACTCAGGGCCGCCCCTCCCCGCCCAGCCAGCATGTGCCTCGCTGCTCACCCGACCACGCAGCCCTCAGTTACAGATGCCTGCCCGGGATACGTGGGACGAGGGCTGCGGCTTCCCTGGGGACGGGGTGCGTGGAGCCTGCCTGCAGCCGTGTTCCTGTTTACGTGCTGAGTGAAGCTGGACCTGGGTGGGATGGGGCATTCTGCCCAAGGGTCTCTT-GGGGGGTCCATGAGGACTGTGTTCTGACGATACTGCCCTCCTTCCTGAGGCTG-CCGTGGGGCTCCATGGAGGCCATGGGGTGGTGAGGATGGAAGAACACCTAGGCTGGGCTCCTGGGACCCCAGCAGCAGCTGAAGGCACTTGGAGCACCACAATTCCCACCCACGGGCCAGGCAAGCCCAGAACCGTCCCCAAAGAAGGGAGCAAGGAGACACGGCCTTTTAGTGATAATATCATAACCAAAAAGTTCTTTAACATTTTTTCATTTTTTTCTGTCACTCAATATTTTTAAAATTATATGTCCATTTTTTTTATTATTT-CACCCATCTAATCATTGCCATCTATACCAAACAAAAAAATCTATGCACCGGTGTTCACAAAGCATTTAAGATGCCTGTGAAATGTAATAAGAACTAACTGCAGCTGCACAATATTCCCTCGTATGTATGTTATCACCATGCTGACGCTGGGCACTCAGAGCATTTAAAGGTT---TTTATTATAATG s panTro5.chr3 202084054 1491 + 202621043 AGAATCCGTTTGAGGGACACTGCTGACCCTCCAGGGCTGGGTCAC-GGAGGCTCCAGCGGCTTTGGTGGGACTCCTGGCCAGGCTCCT----------------------CCTGGACTGGGCCTGGGCTGGTCTCCGGCCTCCTGCCTCCCTTGGTGCAGGATCCTTGCTCCCCAGCTTCCCTGGGAAATCCGACGCCTTCTGAT-CCTGTATGCATCCCGCACCCCTGACGCTGGCGGAGTTGCCTTTCTGCGTGTATAGCTCCTAACAGGGCAGCACAGCCGTTCTGAAACCTCACACGTCCTCACTGGGGTGGCTGAGGCTGGGCCACCTGGTgttcacctcctgaccctgcaactgtgcagagaacctctcttcaaatagggggcaggtctttgtggctgtgtttaagttaaagatcttgagataaggaggtcattctggatgaacccgttggccctacatgcacggcaagtgtccttacacagaggcagagggaggttagacgcaggcagaggaggaggccgcctggcgaccgaggcagaggtgcagcagtgcggccgcggcccagggacgcctggagccacagaagctggtggaggtggcagggtcctcccctggagcctctggagggagcacggcccgtggactc---gatttcagacccctccctgctgagcggggagagaatgagtccctgttgttttgagctgcccagactgtggggatctgccatggcagctccaggaCCCTCAGACCTTCGGCTCAGAGCCCCTCCAGCACTGAGCAAGACGACCACTCAGGACCGCCCCTCCCCGCCCAGCCAGCATGTGCCTCGCTGCTCACCCGACCATGCGGCCCTCAGTTACAGATGCCTGCCCGGGATACGTGGGACGGGGGCTGCGGCTTCCCTGGGGACGGGGTGCGTGGAGCCTGCCTGCAGCCGTGTTCCTGTTTAGGTGCTGAGTGAAGCTGGACCTGGGTGGGACGGGGCATTCTGCCCAAGGGTCTCTTGGGGGGGTCCATGAGGACTGTGTTCTGACGATACTGCCCTCCTTCCTGAGGCTG-CCATGGGGCTCCATGGAGGCCATGGGGTGGTGAGGACGGAAGAACACCTAGGCTGGGCTCCCGGGACCCCAGCAGCAGCTGAAGGCACTTGGAGCACCACAATTCCCACCCACGGGCCAGGCAAGGCCAGAACCGTCCCCAAAGAAGGCAGCAAGGAGACACGGCCTTTTAGTGATAATATCATAACCAAAAAGTTCTTTAACATTTTTTCATTTTTTTCTGTCACTGAATATTTTTTAAATTATATGTCCA-TTTTTTTATTATTT-CACCCATCTAATCATTGCCATCTATACCAAACAAAAAAATCTATGCACCAGTGTTCACAAAGCATTTAAGATGCCTGTGAAATGTAATAAGAACTAACTGCAgctgcacaatattccctcgtatgtatgttatcaccatgctgacgctgggcactcagagcatttacaggtt---tttattataatg i panTro5.chr3 C 0 N 0 s gorGor5.CYUI01015777v1 806238 1486 + 837792 AGAATCCGTTTGAGGGACAGTGCTGACCCTCCAGGGCTGGGTCCC-GGAGGCTCCAGTGGCTTTGGTGGGACTCCTGGCCAGGCTCCT----------------------CCTGGACTGGGCCTGGGCTGGTCTCCGGCCTCCTGCCTCCCTTGGTGCAGGATCCTTGCTCCCCAGCTTCCCTGGGAAATCCGACGCCTTCTGAT-CCTGCATGCATCCAGCACCCCTGACGCTGGCGGAGTTGCCTTTCTGCGTGTATAGCTCCTAACAGGGCAGCACAGCCGTTCTGAAACCTCACACGTCCTCACTGGGGTGGCTGAGGCTGGGCCACCTGGTgttcacctcctgaccctggaactgtgcagagaacctctcttcaaataggaggcaggtctttgtggctgtgtttaagttaaagatcttgagataagggggtcattctggattaactcgttggccctacatgcatggcaagtgtccttacacagaggcagagggaggttagacgcagacagaggaggaggccgcctggagaccgaggcagaggtgcagcaatgcggccacggcccagggacgcctggagccacagaagctggcagaggtggcagggtcctcccctggagcctctggagggagcacggcccgtggactc---gatttcagacccctccctgctgagcggggagagaatgagtccctgttgttttgagctgcgcagactgt-gggatctgccgtggcagctccaggaCCCTCAGACCTTTGGCTCAGAGCCCCTCCAGCACTGAGCAAGACGACCACTCAGGGCTGCCCCTCCTCGCCCAGCCAGCATGTGCCTCGCTGCTCACCCGACCCCGCAGCCCTCAGTTACAGATGCCTGCCCGGGATACGTGGGACGGGGGCTGCGGCTTCCCTGGGGACGGGGTGCGTGGAGCCTGCCTGCAGCCGTGTTCCTGTTTAGGTGCTGAGTGAAGCTGGACCTGGGTGAGACGGGGCATTCGGCCCAAGGGTCTCTT--GGGGGTCCATGAGGACTCTGTTCTGACGATACTGCCCTCCTTCCTGAGG-TG-CCGTGGGGCTCCATGGAGGCCATGGGGTGGTGAGGACGGAAGAACACCTAGGCTGGGCTCCTGGGACCCCAGCAGCAGCTGAAGGCACTTGGAGCACCACAATTCCCACCCACGGGCCAGGCAACGCCAGAACCGTCCCCAAAGAAGGGAGCAAGGAGACACGGCCTTTTAGTGATAATATCATAACCAAAAAGTTCTTTAACATTTTTTCATTTTCTTCTGTCACTCAATATTTTTAAAATTTTATGTCC--TTTTTTTATTATTT-CACCCATCTAATCATTGCCATCTATACCAAACAAAAAAATCTATGCACTGGTGTTCACAAAGCATTTAAGATGCCTGTGAAATGTAATAAGAACTAACTGCAgctgcacaatattccctcgtatgtatgttatcaccatgctgacgctggacactcagagcatttacaggtt---tttattataatg i gorGor5.CYUI01015777v1 C 0 N 0 s nomLeu3.chr11 2934082 1502 - 123690457 GGAATCCGTTTGAGGGACAGTGCTGACCCTCCAGGGCTGGGTCACTGGAGGCTCCAGTGGCTTTGGTGGGACTCCTGGCCAGGCTCCTcctgggctgggcctgggctgggcctgggctgggcctgggctggTCTCTGGCCTCCTGCCTCCCTTGATGCAGGACCCTTGCTCCCCAGCTTCCCTGGGAAATCCAACGCCATCTGATCCCCGCACGCATCCAGCACCCCTGATGCTGGCGGAGTTGCCTTTCTGCGTGTATAACTCCTAACAGGGCAGCACAGCCGTTCTGAAACCTCGCACGTCCTCACTGGGGCGGCTGAGGCtgggccaccaggtgttcacctcctgaccctggaaccatgcacagaacctctcttcaaataggaggcaggtctttgtggctgtgattaagttaaagatcttgagataaggaggtcattctggattaacccgttggccctaaatgcatggcaagtgtccttacacagaggcagagggaggttagacgcagacagagcag-----------------aaggcagaggtgcagcaatgcggctgcggcccagggacgcctggagccacagaagctggcggaggtgggagggtcctcccctgaagcctctggagggagcacagcccgtggactccttgatttcagacccctccctgctgagtggggagagaatgagcccctgctgtttcgagctgcccaggctgtggggatctgccatggcagttccaggaCCCTCGGACCTTCGGCTCGGAACCCCTCCAGCACTGAGCAAGATGACTGCTCAGGGCCACCCCTCCCCGCCCAGCCAGCGTGTACCTCGCTGCTCACCCGACCACGCTGCCCTCAGTTACAGATGCCTGCCCGGGATACATGGGACAGGGGCTGCGGCTTCCCTGGGGATGGGGTGCGTGGAGCCTGCCTGCAGCCGTGCTCCTGTTTAGGTGCTGAGTGAAGCTGGACCTGGGTGGGATGGGGCATTCTGTCCAAGGGTTTCTT---GGGGTCCACGAGGACTCTGTTCTGACGATACTGCCCTCCTTCCTGAGGCTGCCCGTGGGGCTCCATGGAGGCCATGGGGTGGTGAGGACGGAAGAACACCTAGGCTGGGCTCCTGGGA-CCCAGCAGCAGCTGAAGGCACTTGAAGCACCATAATTCCCACCCACGGGCCAGGCAAGGCCAGAACCGTCCCCAAAGAAGGGAGCAAGGAGACAGGGCCTTTTAGTGATAATATCATAACCAAAAAGTTCTTTAACATTTTTTCCTTTTTTTCTGTCACTCAATATTTTTAAAATTATATGTCCA-TTTTTTAATTACTTGCACCCATCTAATCATTGCCATCTATACCAAACAAAAAAATCTATGCACCGGTGTTCACAAAGCATTTAAGATGCCTATGAAATGTAATAAGAACTAACTGAAgctgcacaatattccctcatatgtacattatcaccatgctgatgctgggcactcagagtatttacaggttttctttattataatg i nomLeu3.chr11 C 0 N 0